Query 006982
Match_columns 623
No_of_seqs 562 out of 4977
Neff 9.0
Searched_HMMs 29240
Date Mon Mar 25 14:05:27 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/006982.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/006982hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4asz_A BDNF/NT-3 growth factor 100.0 1.4E-52 4.8E-57 426.4 17.1 261 305-589 13-290 (299)
2 4aoj_A High affinity nerve gro 100.0 5.3E-52 1.8E-56 428.0 21.4 261 305-589 41-320 (329)
3 4gt4_A Tyrosine-protein kinase 100.0 3.7E-52 1.3E-56 425.2 18.4 256 307-586 28-304 (308)
4 3hmm_A TGF-beta receptor type- 100.0 3E-51 1E-55 419.1 22.0 274 305-590 3-299 (303)
5 3omv_A RAF proto-oncogene seri 100.0 5.9E-51 2E-55 414.7 23.8 261 305-590 36-302 (307)
6 4g3f_A NF-kappa-beta-inducing 100.0 1.4E-48 4.9E-53 400.9 22.5 258 305-590 58-318 (336)
7 4ase_A Vascular endothelial gr 100.0 1.9E-49 6.5E-54 412.2 15.1 269 298-589 57-348 (353)
8 4b9d_A Serine/threonine-protei 100.0 3E-49 1E-53 407.8 15.5 249 305-581 24-276 (350)
9 4fih_A Serine/threonine-protei 100.0 7.8E-49 2.7E-53 404.1 16.5 247 305-581 74-323 (346)
10 3fpq_A Serine/threonine-protei 100.0 1E-47 3.5E-52 388.0 21.6 245 308-581 29-282 (290)
11 4aw0_A HPDK1, 3-phosphoinositi 100.0 5.4E-48 1.8E-52 392.0 16.6 249 305-582 32-285 (311)
12 4fie_A Serine/threonine-protei 100.0 4.1E-47 1.4E-51 400.8 19.8 247 305-581 151-400 (423)
13 3hyh_A Carbon catabolite-derep 100.0 8.1E-47 2.8E-51 378.1 19.4 244 305-581 13-262 (275)
14 3ubd_A Ribosomal protein S6 ki 100.0 2.7E-47 9.4E-52 386.7 14.9 199 305-514 24-229 (304)
15 4g31_A Eukaryotic translation 100.0 5.5E-46 1.9E-50 378.4 18.5 252 305-581 5-279 (299)
16 3uim_A Brassinosteroid insensi 100.0 2E-45 6.7E-50 380.9 21.0 292 291-586 16-309 (326)
17 2qkw_B Protein kinase; three-h 100.0 6.2E-44 2.1E-48 369.0 22.5 285 296-588 30-315 (321)
18 4b99_A Mitogen-activated prote 100.0 1.1E-43 3.9E-48 375.1 21.2 203 305-515 54-267 (398)
19 4f9c_A Cell division cycle 7-r 100.0 1.4E-42 4.9E-47 362.7 24.4 202 303-515 19-251 (361)
20 3v5w_A G-protein coupled recep 100.0 1.1E-41 3.9E-46 375.0 21.0 197 305-514 189-394 (689)
21 3soc_A Activin receptor type-2 100.0 1.3E-41 4.4E-46 351.8 19.7 274 304-590 23-320 (322)
22 2nru_A Interleukin-1 receptor- 100.0 1.4E-40 4.6E-45 341.4 26.8 284 291-588 11-306 (307)
23 4hcu_A Tyrosine-protein kinase 100.0 1.9E-41 6.7E-46 341.0 19.5 257 305-589 10-267 (269)
24 3s95_A LIMK-1, LIM domain kina 100.0 3.4E-41 1.2E-45 346.5 21.7 262 305-590 10-284 (310)
25 3uto_A Twitchin; kinase, muscl 100.0 3.1E-41 1.1E-45 373.6 21.7 250 305-581 157-410 (573)
26 3kul_A Ephrin type-A receptor 100.0 3.3E-41 1.1E-45 349.2 19.5 260 305-590 49-315 (325)
27 3q4u_A Activin receptor type-1 100.0 6.4E-41 2.2E-45 342.6 21.3 266 304-586 7-300 (301)
28 2psq_A Fibroblast growth facto 100.0 4.4E-41 1.5E-45 354.5 20.6 260 305-588 81-364 (370)
29 3sxs_A Cytoplasmic tyrosine-pr 100.0 2.9E-41 1E-45 339.4 17.1 259 304-590 7-266 (268)
30 2qol_A Ephrin receptor; recept 100.0 3.5E-41 1.2E-45 355.5 18.1 260 305-590 45-311 (373)
31 3p86_A Serine/threonine-protei 100.0 4.2E-41 1.4E-45 345.8 17.5 260 304-590 36-300 (309)
32 3gen_A Tyrosine-protein kinase 100.0 7.7E-41 2.6E-45 339.1 18.9 258 304-589 23-281 (283)
33 1qcf_A Haematopoetic cell kina 100.0 6.4E-41 2.2E-45 363.0 18.7 258 304-589 187-445 (454)
34 3cbl_A C-FES, proto-oncogene t 100.0 2.1E-41 7.3E-46 357.9 14.3 260 304-590 113-376 (377)
35 2c30_A Serine/threonine-protei 100.0 1.4E-39 4.7E-44 336.4 26.6 259 294-582 24-295 (321)
36 3op5_A Serine/threonine-protei 100.0 2.4E-40 8.1E-45 348.3 21.2 275 304-594 34-335 (364)
37 3poz_A Epidermal growth factor 100.0 1.6E-40 5.5E-45 344.3 19.3 257 305-589 15-279 (327)
38 3fxz_A Serine/threonine-protei 100.0 2.1E-40 7.1E-45 338.7 19.6 249 304-581 19-269 (297)
39 1opk_A P150, C-ABL, proto-onco 100.0 1E-40 3.5E-45 365.0 17.0 259 304-589 219-479 (495)
40 3t9t_A Tyrosine-protein kinase 100.0 3.3E-40 1.1E-44 331.2 18.2 257 305-589 8-265 (267)
41 2ivs_A Proto-oncogene tyrosine 100.0 4.5E-40 1.5E-44 338.4 19.2 262 304-589 22-312 (314)
42 3mdy_A Bone morphogenetic prot 100.0 1.6E-39 5.4E-44 337.8 23.5 275 302-590 34-333 (337)
43 3tt0_A Basic fibroblast growth 100.0 4.4E-40 1.5E-44 348.5 19.4 266 304-593 68-357 (382)
44 1luf_A Muscle-specific tyrosin 100.0 2.9E-40 9.9E-45 344.3 17.6 265 303-591 45-338 (343)
45 3ugc_A Tyrosine-protein kinase 100.0 3.9E-40 1.3E-44 336.1 17.7 266 305-590 10-293 (295)
46 3vhe_A Vascular endothelial gr 100.0 1.6E-40 5.5E-45 348.6 14.8 271 296-589 13-356 (359)
47 1fmk_A C-SRC, P60-SRC, tyrosin 100.0 2.5E-40 8.5E-45 358.1 16.7 259 304-590 183-442 (452)
48 3fe3_A MAP/microtubule affinit 100.0 6.9E-40 2.4E-44 339.4 19.2 247 304-582 14-265 (328)
49 1k9a_A Carboxyl-terminal SRC k 100.0 9E-40 3.1E-44 353.5 20.5 253 304-589 192-446 (450)
50 3l9p_A Anaplastic lymphoma kin 100.0 1.3E-40 4.6E-45 350.4 13.6 262 305-590 71-347 (367)
51 3qup_A Tyrosine-protein kinase 100.0 9.2E-40 3.2E-44 337.8 19.6 267 304-594 22-304 (323)
52 3lb7_A RAF proto-oncogene seri 100.0 4.2E-39 1.4E-43 330.6 24.0 261 305-590 36-302 (307)
53 4eqm_A Protein kinase; transfe 100.0 2.3E-39 7.8E-44 330.5 21.3 261 305-590 11-277 (294)
54 1tki_A Titin; serine kinase, m 100.0 1.8E-39 6.1E-44 335.5 20.7 252 304-582 4-258 (321)
55 3c1x_A Hepatocyte growth facto 100.0 1.1E-39 3.8E-44 343.8 19.5 264 306-594 90-361 (373)
56 3gxj_A TGF-beta receptor type- 100.0 2.9E-41 1E-45 345.3 7.1 262 305-590 3-299 (303)
57 3kfa_A Tyrosine-protein kinase 100.0 5.8E-40 2E-44 333.4 16.5 260 304-590 12-273 (288)
58 4euu_A Serine/threonine-protei 100.0 3.6E-39 1.2E-43 332.8 22.6 274 305-588 9-309 (319)
59 3tki_A Serine/threonine-protei 100.0 1.2E-39 4E-44 337.2 18.5 252 305-582 7-262 (323)
60 3kmu_A ILK, integrin-linked ki 100.0 1.5E-39 5.2E-44 326.9 18.8 252 305-589 10-271 (271)
61 3dtc_A Mitogen-activated prote 100.0 7.4E-40 2.5E-44 329.6 16.5 252 305-586 7-271 (271)
62 3zgw_A Maternal embryonic leuc 100.0 2.3E-39 7.7E-44 337.7 20.7 249 304-582 9-261 (347)
63 1qpc_A LCK kinase; alpha beta 100.0 8.5E-40 2.9E-44 330.7 16.7 258 305-590 13-271 (279)
64 3g2f_A Bone morphogenetic prot 100.0 7.2E-40 2.5E-44 340.4 16.2 280 305-593 13-323 (336)
65 1o6l_A RAC-beta serine/threoni 100.0 4.7E-39 1.6E-43 334.2 21.9 247 305-582 5-261 (337)
66 2pvf_A Fibroblast growth facto 100.0 1.6E-39 5.4E-44 337.8 18.2 263 304-590 34-320 (334)
67 2yab_A Death-associated protei 100.0 1.2E-38 4.1E-43 334.1 24.8 250 304-581 11-272 (361)
68 1t46_A HOMO sapiens V-KIT hard 100.0 1.4E-39 4.8E-44 334.6 17.4 263 305-590 23-309 (313)
69 3pls_A Macrophage-stimulating 100.0 4.7E-39 1.6E-43 328.2 20.9 265 306-594 22-293 (298)
70 1mp8_A Focal adhesion kinase 1 100.0 1.6E-39 5.5E-44 329.2 17.2 256 305-589 15-277 (281)
71 3c0i_A Peripheral plasma membr 100.0 2.5E-39 8.4E-44 338.8 19.0 253 305-581 24-286 (351)
72 2izr_A Casein kinase I isoform 100.0 6.9E-39 2.4E-43 332.4 22.2 267 305-592 9-285 (330)
73 3kex_A Receptor tyrosine-prote 100.0 1.1E-39 3.8E-44 337.7 15.9 257 305-589 13-277 (325)
74 2eva_A TAK1 kinase - TAB1 chim 100.0 3.6E-39 1.2E-43 331.1 19.5 259 305-592 8-267 (307)
75 1rjb_A FL cytokine receptor; k 100.0 1.6E-39 5.6E-44 339.0 17.0 264 304-590 44-336 (344)
76 3qd2_B Eukaryotic translation 100.0 7.9E-39 2.7E-43 331.5 21.9 253 304-581 5-325 (332)
77 3f66_A Hepatocyte growth facto 100.0 5.8E-39 2E-43 327.8 20.2 262 305-591 25-294 (298)
78 1csn_A Casein kinase-1; phosph 100.0 1.9E-38 6.5E-43 323.8 24.0 269 305-593 10-288 (298)
79 3niz_A Rhodanese family protei 100.0 1.7E-39 6E-44 334.1 16.4 202 304-516 20-225 (311)
80 1b6c_B TGF-B superfamily recep 100.0 9E-39 3.1E-43 332.9 22.0 272 301-591 38-339 (342)
81 2zv2_A Calcium/calmodulin-depe 100.0 3.8E-39 1.3E-43 329.4 18.4 247 305-581 13-292 (298)
82 2h8h_A Proto-oncogene tyrosine 100.0 1.1E-39 3.7E-44 360.2 15.4 258 304-589 266-524 (535)
83 4dc2_A Protein kinase C IOTA t 100.0 1.1E-38 3.8E-43 337.7 21.7 200 304-514 51-256 (396)
84 3og7_A AKAP9-BRAF fusion prote 100.0 9.8E-39 3.4E-43 324.8 20.5 261 304-589 23-289 (289)
85 2y0a_A Death-associated protei 100.0 1.8E-38 6.2E-43 328.8 22.7 249 305-581 11-271 (326)
86 2ozo_A Tyrosine-protein kinase 100.0 7.9E-39 2.7E-43 358.4 21.6 253 312-591 343-601 (613)
87 4f0f_A Serine/threonine-protei 100.0 8.3E-39 2.8E-43 324.8 19.7 251 305-586 19-287 (287)
88 3lxp_A Non-receptor tyrosine-p 100.0 1.7E-39 5.7E-44 335.3 14.5 269 307-591 33-313 (318)
89 3lzb_A Epidermal growth factor 100.0 6.5E-39 2.2E-43 332.2 18.9 257 305-589 15-279 (327)
90 3uc3_A Serine/threonine-protei 100.0 3.6E-39 1.2E-43 338.7 16.6 253 304-582 19-275 (361)
91 1u59_A Tyrosine-protein kinase 100.0 8.5E-39 2.9E-43 324.9 18.9 258 306-590 10-274 (287)
92 1mqb_A Ephrin type-A receptor 100.0 7.6E-39 2.6E-43 332.6 18.7 260 305-590 44-311 (333)
93 1ob3_A PFPK5, cell division co 100.0 2E-38 7E-43 322.3 21.3 199 305-514 2-204 (288)
94 3h4j_B AMPK kdaid, SNF1-like p 100.0 7.4E-39 2.5E-43 332.4 18.2 245 305-582 9-259 (336)
95 3gni_B Strad alpha; kinase fol 100.0 2.2E-38 7.6E-43 336.3 22.3 208 304-516 24-242 (389)
96 2wqm_A Serine/threonine-protei 100.0 8.7E-39 3E-43 328.5 18.1 264 304-590 31-299 (310)
97 3a8x_A Protein kinase C IOTA t 100.0 1.8E-38 6.3E-43 331.1 20.8 199 305-514 9-213 (345)
98 2v62_A Serine/threonine-protei 100.0 1.2E-38 4.1E-43 332.7 19.4 267 305-588 37-328 (345)
99 3txo_A PKC-L, NPKC-ETA, protei 100.0 4.2E-39 1.5E-43 336.7 15.9 200 304-514 22-227 (353)
100 1fvr_A Tyrosine-protein kinase 100.0 1E-38 3.5E-43 330.6 18.4 260 305-591 25-303 (327)
101 3e7e_A HBUB1, BUB1A, mitotic c 100.0 1.1E-38 3.8E-43 335.7 18.9 256 304-590 64-341 (365)
102 3brb_A Proto-oncogene tyrosine 100.0 1.1E-38 3.8E-43 328.2 18.4 265 302-590 31-310 (313)
103 2bdw_A Hypothetical protein K1 100.0 3.5E-38 1.2E-42 331.2 22.4 251 304-582 28-285 (362)
104 3soa_A Calcium/calmodulin-depe 100.0 3.7E-38 1.3E-42 339.1 23.0 253 303-582 9-268 (444)
105 3hko_A Calcium/calmodulin-depe 100.0 2.6E-38 8.8E-43 330.0 20.9 263 300-581 21-330 (345)
106 3lxl_A Tyrosine-protein kinase 100.0 2.2E-39 7.6E-44 335.7 12.7 269 305-593 23-308 (327)
107 2jii_A Serine/threonine-protei 100.0 5.2E-39 1.8E-43 336.4 15.7 273 305-596 42-344 (352)
108 4fr4_A YANK1, serine/threonine 100.0 3.1E-38 1.1E-42 333.1 21.6 248 305-581 15-271 (384)
109 2buj_A Serine/threonine-protei 100.0 8.9E-39 3.1E-43 329.4 17.0 267 304-590 28-308 (317)
110 4e5w_A Tyrosine-protein kinase 100.0 7.4E-39 2.5E-43 327.6 16.2 266 305-587 21-301 (302)
111 3o0g_A Cell division protein k 100.0 2.7E-38 9.1E-43 322.1 20.3 198 305-513 2-204 (292)
112 4eut_A Serine/threonine-protei 100.0 1.1E-38 3.7E-43 339.5 17.9 274 305-589 9-310 (396)
113 1p4o_A Insulin-like growth fac 100.0 6.7E-39 2.3E-43 331.1 15.8 266 301-590 21-301 (322)
114 2w4o_A Calcium/calmodulin-depe 100.0 1.4E-38 4.7E-43 332.8 18.3 250 304-581 52-305 (349)
115 4aw2_A Serine/threonine-protei 100.0 4.5E-39 1.5E-43 345.1 14.9 209 297-514 66-284 (437)
116 1kob_A Twitchin; kinase, intra 100.0 2.6E-38 8.7E-43 334.7 20.4 252 304-582 50-305 (387)
117 3v8s_A RHO-associated protein 100.0 1.7E-39 5.9E-44 345.8 11.4 259 297-582 61-330 (410)
118 1byg_A CSK, protein (C-termina 100.0 8.1E-39 2.8E-43 323.4 15.8 252 305-589 21-274 (278)
119 2xir_A Vascular endothelial gr 100.0 7.9E-39 2.7E-43 329.4 15.9 270 298-590 20-312 (316)
120 2pmi_A Negative RE, cyclin-dep 100.0 4.8E-38 1.7E-42 324.2 21.6 203 304-514 4-212 (317)
121 3cc6_A Protein tyrosine kinase 100.0 1.1E-38 3.9E-43 322.9 16.6 256 304-588 11-273 (281)
122 1xbb_A Tyrosine-protein kinase 100.0 1.5E-38 5.2E-43 323.7 17.4 256 305-588 16-279 (291)
123 2i1m_A Macrophage colony-stimu 100.0 3.1E-39 1.1E-43 335.3 12.4 263 304-589 45-327 (333)
124 2a19_B Interferon-induced, dou 100.0 9.5E-39 3.3E-43 323.5 15.7 250 304-590 10-276 (284)
125 3dbq_A Dual specificity protei 100.0 9.5E-39 3.3E-43 333.3 16.0 248 305-583 9-275 (343)
126 3llt_A Serine/threonine kinase 100.0 1.1E-38 3.7E-43 335.0 16.5 204 298-514 28-262 (360)
127 1fot_A TPK1 delta, CAMP-depend 100.0 4.3E-38 1.5E-42 324.5 20.7 242 305-581 6-258 (318)
128 1xjd_A Protein kinase C, theta 100.0 9.1E-39 3.1E-43 333.0 15.7 248 302-580 14-268 (345)
129 3p1a_A MYT1 kinase, membrane-a 100.0 1.2E-38 4.1E-43 327.9 16.3 243 305-581 57-304 (311)
130 4fvq_A Tyrosine-protein kinase 100.0 5.4E-39 1.9E-43 326.4 13.4 251 305-589 8-276 (289)
131 3is5_A Calcium-dependent prote 100.0 3E-38 1E-42 320.6 18.7 251 305-581 22-278 (285)
132 2x4f_A Myosin light chain kina 100.0 5.2E-38 1.8E-42 331.2 20.9 248 307-581 91-342 (373)
133 3ork_A Serine/threonine protei 100.0 4.2E-38 1.4E-42 323.7 19.6 260 305-588 12-281 (311)
134 2h34_A Serine/threonine-protei 100.0 1.1E-37 3.8E-42 320.3 22.6 260 304-590 33-298 (309)
135 3uzp_A CKI-delta, CKID, casein 100.0 1.7E-37 5.7E-42 316.4 23.8 272 304-595 8-287 (296)
136 2yex_A Serine/threonine-protei 100.0 8.7E-38 3E-42 315.2 21.3 252 304-581 6-261 (276)
137 3a62_A Ribosomal protein S6 ki 100.0 3.5E-38 1.2E-42 326.7 18.6 198 305-513 17-223 (327)
138 2i0e_A Protein kinase C-beta I 100.0 6.1E-38 2.1E-42 327.8 20.6 199 304-513 19-223 (353)
139 4hgt_A Casein kinase I isoform 100.0 1.6E-37 5.5E-42 316.4 23.1 271 303-593 7-285 (296)
140 3kn6_A Ribosomal protein S6 ki 100.0 2.6E-38 8.8E-43 327.4 17.5 250 310-581 16-270 (325)
141 1rdq_E PKA C-alpha, CAMP-depen 100.0 6E-38 2.1E-42 327.7 20.3 243 305-581 41-293 (350)
142 3cok_A Serine/threonine-protei 100.0 7.3E-38 2.5E-42 316.3 20.2 247 305-581 11-262 (278)
143 2zmd_A Dual specificity protei 100.0 2.4E-38 8.1E-43 335.9 17.4 248 305-583 56-322 (390)
144 4ejn_A RAC-alpha serine/threon 100.0 3.2E-38 1.1E-42 341.2 18.5 247 304-581 147-404 (446)
145 4fl3_A Tyrosine-protein kinase 100.0 1.8E-38 6.2E-43 356.4 16.9 250 311-588 375-631 (635)
146 2yfx_A Tyrosine-protein kinase 100.0 1.1E-38 3.7E-43 330.5 13.9 263 304-590 29-306 (327)
147 3dls_A PAS domain-containing s 100.0 4.9E-38 1.7E-42 326.7 18.6 241 303-582 22-275 (335)
148 2y94_A 5'-AMP-activated protei 100.0 1.1E-37 3.8E-42 337.8 22.1 244 305-581 16-266 (476)
149 4agu_A Cyclin-dependent kinase 100.0 1.1E-37 3.6E-42 320.4 20.9 199 305-514 3-206 (311)
150 2a2a_A Death-associated protei 100.0 2E-37 6.7E-42 320.2 22.8 250 304-581 11-272 (321)
151 2w5a_A Serine/threonine-protei 100.0 6.6E-39 2.3E-43 324.1 11.5 256 304-585 5-271 (279)
152 3fdn_A Serine/threonine-protei 100.0 6.6E-38 2.2E-42 316.9 18.7 247 304-583 8-259 (279)
153 2vd5_A DMPK protein; serine/th 100.0 7E-39 2.4E-43 341.2 12.1 210 296-514 52-273 (412)
154 2w1i_A JAK2; chromosomal rearr 100.0 4.9E-38 1.7E-42 325.4 17.8 266 305-590 41-324 (326)
155 3f3z_A Calcium/calmodulin-depe 100.0 2E-37 6.8E-42 313.0 21.5 249 304-581 8-261 (277)
156 3c4z_A Rhodopsin kinase; Ser/T 100.0 1.1E-37 3.7E-42 341.7 21.1 203 305-514 185-392 (543)
157 1u5q_A Serine/threonine protei 100.0 3.2E-38 1.1E-42 329.7 16.0 247 305-584 54-308 (348)
158 2r5t_A Serine/threonine-protei 100.0 5.1E-38 1.8E-42 330.7 17.4 247 305-583 38-291 (373)
159 3g33_A Cell division protein k 100.0 2.5E-37 8.5E-42 317.4 22.0 201 303-514 7-222 (308)
160 3kk8_A Calcium/calmodulin depe 100.0 2.2E-37 7.6E-42 313.7 21.2 251 304-582 5-262 (284)
161 3a7i_A MST3 kinase, serine/thr 100.0 1E-37 3.5E-42 319.5 18.7 249 305-584 22-273 (303)
162 2eue_A Carbon catabolite derep 100.0 6.3E-38 2.2E-42 316.4 16.8 244 305-581 13-262 (275)
163 3bhy_A Death-associated protei 100.0 3.6E-37 1.2E-41 312.0 22.4 257 305-589 5-275 (283)
164 1nxk_A MAP kinase-activated pr 100.0 1.1E-37 3.8E-42 331.8 19.5 253 305-583 61-323 (400)
165 1x8b_A WEE1HU, WEE1-like prote 100.0 6.9E-38 2.4E-42 317.5 16.1 245 304-581 10-279 (289)
166 3i6u_A CDS1, serine/threonine- 100.0 3.2E-37 1.1E-41 330.4 22.0 251 303-581 133-399 (419)
167 1t4h_A Serine/threonine-protei 100.0 2.1E-37 7.2E-42 315.0 19.1 245 306-581 27-282 (290)
168 2acx_A G protein-coupled recep 100.0 1.2E-37 4E-42 342.4 18.3 252 304-581 183-444 (576)
169 3fme_A Dual specificity mitoge 100.0 6.1E-38 2.1E-42 318.7 14.9 253 304-581 6-266 (290)
170 2y7j_A Phosphorylase B kinase 100.0 6.3E-37 2.1E-41 322.2 22.7 253 301-581 90-359 (365)
171 4aaa_A Cyclin-dependent kinase 100.0 1E-37 3.5E-42 323.8 16.4 199 305-514 25-228 (331)
172 3ll6_A Cyclin G-associated kin 100.0 5.7E-38 1.9E-42 325.8 14.5 259 305-590 28-310 (337)
173 2qr7_A Ribosomal protein S6 ki 100.0 8.3E-38 2.8E-42 325.7 15.4 252 304-582 21-278 (342)
174 3oz6_A Mitogen-activated prote 100.0 1.7E-37 5.7E-42 329.4 18.0 204 303-515 7-235 (388)
175 3eqc_A Dual specificity mitoge 100.0 1.7E-37 5.9E-42 325.9 17.9 198 305-514 33-233 (360)
176 3mi9_A Cell division protein k 100.0 5.5E-37 1.9E-41 320.9 21.5 203 305-514 17-232 (351)
177 2rku_A Serine/threonine-protei 100.0 3.8E-37 1.3E-41 313.8 19.6 248 304-582 14-266 (294)
178 3lm5_A Serine/threonine-protei 100.0 1.7E-37 5.8E-42 321.6 17.1 256 301-582 24-288 (327)
179 3byv_A Rhoptry kinase; malaria 100.0 2.2E-38 7.7E-43 334.8 10.6 248 304-587 72-367 (377)
180 2clq_A Mitogen-activated prote 100.0 2.9E-37 9.9E-42 314.5 18.4 251 306-581 23-278 (295)
181 3mtl_A Cell division protein k 100.0 2.3E-37 8E-42 320.1 17.8 199 305-514 2-204 (324)
182 3nsz_A CK II alpha, casein kin 100.0 6.7E-37 2.3E-41 317.2 21.3 193 305-514 36-234 (330)
183 3ttj_A Mitogen-activated prote 100.0 7.4E-37 2.5E-41 331.4 22.3 197 304-515 61-267 (464)
184 1ua2_A CAK, cell division prot 100.0 4.3E-37 1.5E-41 321.2 19.6 202 302-514 7-216 (346)
185 2ac3_A MAP kinase-interacting 100.0 3.7E-37 1.3E-41 317.1 18.9 262 305-581 12-295 (316)
186 2owb_A Serine/threonine-protei 100.0 4.2E-37 1.4E-41 319.8 19.3 248 304-582 40-292 (335)
187 1wak_A Serine/threonine-protei 100.0 5.5E-37 1.9E-41 325.9 20.5 265 304-581 36-391 (397)
188 2x7f_A TRAF2 and NCK-interacti 100.0 5E-38 1.7E-42 325.1 12.2 257 298-581 17-286 (326)
189 1vzo_A Ribosomal protein S6 ki 100.0 1.1E-37 3.7E-42 326.8 14.7 253 305-583 54-323 (355)
190 2h6d_A 5'-AMP-activated protei 100.0 3.7E-37 1.3E-41 310.7 17.9 246 305-582 11-262 (276)
191 2vgo_A Serine/threonine-protei 100.0 9.7E-37 3.3E-41 309.2 20.9 244 305-581 14-262 (284)
192 3sv0_A Casein kinase I-like; t 100.0 1.2E-36 4.2E-41 330.1 23.0 266 305-590 7-280 (483)
193 1u46_A ACK-1, activated CDC42 100.0 6.7E-38 2.3E-42 318.5 12.3 259 305-589 18-285 (291)
194 2vwi_A Serine/threonine-protei 100.0 3.7E-37 1.2E-41 314.9 17.7 263 304-581 14-287 (303)
195 3an0_A Dual specificity mitoge 100.0 1.5E-37 5E-42 323.7 15.1 253 304-581 50-310 (340)
196 3nyv_A Calmodulin-domain prote 100.0 7.8E-37 2.7E-41 333.9 21.5 250 304-582 25-282 (484)
197 3rp9_A Mitogen-activated prote 100.0 4E-37 1.4E-41 333.8 19.1 195 305-507 53-280 (458)
198 3gbz_A Kinase, CMGC CDK; ssgci 100.0 4.7E-37 1.6E-41 318.5 18.7 200 303-514 32-241 (329)
199 3eb0_A Putative uncharacterize 100.0 2.4E-37 8.2E-42 327.7 16.7 202 301-514 3-245 (383)
200 2pml_X PFPK7, Ser/Thr protein 100.0 5E-37 1.7E-41 320.6 18.8 200 304-515 30-256 (348)
201 2r3i_A Cell division protein k 100.0 2.5E-36 8.6E-41 308.3 23.5 200 305-514 3-207 (299)
202 3pg1_A Mitogen-activated prote 100.0 1.1E-36 3.9E-41 319.8 21.2 207 296-514 13-237 (362)
203 3q5i_A Protein kinase; CDPK, m 100.0 1.6E-36 5.3E-41 333.1 22.8 250 304-582 35-302 (504)
204 3kvw_A DYRK2, dual specificity 100.0 1.3E-36 4.5E-41 326.6 21.5 197 305-514 97-302 (429)
205 2jam_A Calcium/calmodulin-depe 100.0 1.4E-36 4.9E-41 311.1 20.8 250 304-582 8-262 (304)
206 3mwu_A Calmodulin-domain prote 100.0 1.8E-36 6.3E-41 331.0 22.8 250 304-582 21-277 (486)
207 2wtk_C Serine/threonine-protei 100.0 2.5E-36 8.7E-41 309.2 22.4 251 304-582 4-264 (305)
208 3com_A Serine/threonine-protei 100.0 1.4E-36 4.9E-41 312.5 20.6 250 304-581 28-278 (314)
209 3e3p_A Protein kinase, putativ 100.0 3.3E-37 1.1E-41 323.5 16.1 208 298-514 16-235 (360)
210 2y4i_B KSR2, HKSR2, kinase sup 100.0 3.4E-37 1.2E-41 317.7 15.9 260 304-590 32-304 (319)
211 2j0j_A Focal adhesion kinase 1 100.0 4.5E-37 1.5E-41 346.4 17.3 258 303-589 388-652 (656)
212 3lij_A Calcium/calmodulin depe 100.0 2.5E-36 8.4E-41 330.6 22.5 250 304-582 36-292 (494)
213 2ycf_A Serine/threonine-protei 100.0 1.9E-36 6.5E-41 312.9 20.0 250 304-581 9-274 (322)
214 2j7t_A Serine/threonine-protei 100.0 6.6E-37 2.3E-41 313.0 16.2 251 304-581 18-275 (302)
215 1z57_A Dual specificity protei 100.0 2.6E-36 9E-41 313.3 20.8 197 305-514 14-237 (339)
216 3pfq_A PKC-B, PKC-beta, protei 100.0 1E-36 3.6E-41 344.4 19.2 201 303-514 339-545 (674)
217 1zy4_A Serine/threonine-protei 100.0 2E-36 6.9E-41 309.1 19.2 254 304-581 5-283 (303)
218 3q60_A ROP5B; pseudokinase, tr 100.0 1.9E-37 6.5E-42 327.0 11.8 251 305-581 62-352 (371)
219 3n9x_A Phosphotransferase; mal 100.0 1.6E-36 5.6E-41 326.3 19.2 201 304-512 25-253 (432)
220 4e7w_A Glycogen synthase kinas 100.0 2.4E-37 8.4E-42 328.7 12.5 198 305-514 40-245 (394)
221 1j1b_A Glycogen synthase kinas 100.0 1.9E-37 6.4E-42 332.3 11.6 198 305-514 54-260 (420)
222 3cek_A Dual specificity protei 100.0 9.4E-37 3.2E-41 313.8 16.2 249 304-583 27-294 (313)
223 2rio_A Serine/threonine-protei 100.0 9.5E-37 3.2E-41 328.3 16.5 254 307-581 17-295 (434)
224 1cm8_A Phosphorylated MAP kina 100.0 2E-36 6.8E-41 318.5 18.6 194 305-514 25-229 (367)
225 2xrw_A Mitogen-activated prote 100.0 2.6E-36 9E-41 318.2 19.2 195 305-514 25-229 (371)
226 1phk_A Phosphorylase kinase; g 100.0 3.9E-36 1.3E-40 306.7 19.9 250 304-581 16-283 (298)
227 3qyz_A Mitogen-activated prote 100.0 3.6E-36 1.2E-40 316.4 19.6 202 304-515 26-236 (364)
228 2vx3_A Dual specificity tyrosi 100.0 4.8E-36 1.6E-40 317.5 20.1 201 304-515 53-262 (382)
229 1q8y_A SR protein kinase; tran 100.0 2.3E-36 8E-41 318.5 16.8 199 305-515 19-239 (373)
230 2wei_A Calmodulin-domain prote 100.0 1.1E-35 3.6E-40 302.0 20.9 250 303-581 20-276 (287)
231 1blx_A Cyclin-dependent kinase 100.0 8.9E-37 3E-41 315.6 13.0 201 303-514 9-222 (326)
232 4exu_A Mitogen-activated prote 100.0 5.3E-36 1.8E-40 315.9 19.0 194 304-514 41-245 (371)
233 3rgf_A Cyclin-dependent kinase 100.0 2.6E-36 8.8E-41 322.2 16.5 204 306-515 21-240 (405)
234 2fst_X Mitogen-activated prote 100.0 2.4E-36 8.1E-41 317.8 15.8 194 305-514 29-233 (367)
235 3fhr_A MAP kinase-activated pr 100.0 5.6E-36 1.9E-40 311.3 18.3 253 304-582 27-288 (336)
236 2i6l_A Mitogen-activated prote 100.0 4.7E-36 1.6E-40 309.0 17.3 200 305-514 11-228 (320)
237 2b9h_A MAP kinase FUS3, mitoge 100.0 4.7E-36 1.6E-40 313.9 17.5 202 304-514 10-226 (353)
238 2eu9_A Dual specificity protei 100.0 1E-35 3.5E-40 311.1 18.9 197 305-514 19-242 (355)
239 3aln_A Dual specificity mitoge 100.0 1E-35 3.5E-40 308.0 16.3 256 305-582 22-286 (327)
240 3a99_A Proto-oncogene serine/t 100.0 3.9E-36 1.3E-40 310.3 12.1 239 304-581 42-293 (320)
241 3coi_A Mitogen-activated prote 100.0 3.3E-35 1.1E-39 307.7 18.8 193 305-514 24-227 (353)
242 2iwi_A Serine/threonine-protei 100.0 5.2E-36 1.8E-40 308.1 12.0 242 301-581 27-283 (312)
243 3p23_A Serine/threonine-protei 100.0 3.2E-35 1.1E-39 315.7 17.8 250 305-581 24-283 (432)
244 2dyl_A Dual specificity mitoge 100.0 8E-35 2.7E-39 299.7 17.9 249 305-582 25-284 (318)
245 2pzi_A Probable serine/threoni 100.0 8.4E-35 2.9E-39 330.6 17.3 237 305-586 80-326 (681)
246 3uqc_A Probable conserved tran 100.0 6.6E-34 2.2E-38 288.8 21.3 232 305-590 31-267 (286)
247 3qa8_A MGC80376 protein; kinas 100.0 2.2E-35 7.4E-40 327.5 11.0 201 305-514 14-226 (676)
248 3m2w_A MAP kinase-activated pr 100.0 4.2E-33 1.4E-37 284.8 18.0 231 305-582 17-257 (299)
249 3dzo_A Rhoptry kinase domain; 100.0 4.9E-34 1.7E-38 305.1 11.3 242 304-581 77-363 (413)
250 2vuw_A Serine/threonine-protei 100.0 2E-33 7E-38 292.0 4.4 190 304-512 19-278 (336)
251 4azs_A Methyltransferase WBDD; 99.9 5.1E-29 1.7E-33 275.7 4.7 183 313-510 242-437 (569)
252 1ogq_A PGIP-2, polygalacturona 99.9 8.1E-26 2.8E-30 232.2 12.6 163 29-198 2-170 (313)
253 3en9_A Glycoprotease, O-sialog 99.9 4.4E-26 1.5E-30 250.8 6.5 186 309-512 340-539 (540)
254 4ecn_A Leucine-rich repeat pro 99.9 4.6E-24 1.6E-28 245.5 8.3 160 29-197 265-537 (876)
255 4eco_A Uncharacterized protein 99.9 1.1E-23 3.7E-28 237.3 8.9 159 31-197 28-295 (636)
256 3rgz_A Protein brassinosteroid 99.9 5.1E-23 1.7E-27 237.0 11.6 160 26-195 5-196 (768)
257 1zar_A RIO2 kinase; serine kin 99.9 8.3E-23 2.9E-27 206.2 9.9 152 297-484 82-252 (282)
258 4fcg_A Uncharacterized protein 99.8 1.4E-21 4.9E-26 201.8 3.6 176 29-210 23-217 (328)
259 3rgz_A Protein brassinosteroid 99.8 1.3E-20 4.3E-25 217.1 9.6 138 85-223 613-751 (768)
260 1zth_A RIO1 serine protein kin 99.8 8.9E-19 3E-23 174.4 10.9 137 306-458 48-220 (258)
261 3e6j_A Variable lymphocyte rec 99.8 2.9E-18 1E-22 167.5 12.9 149 64-215 16-175 (229)
262 2v9t_B SLIT homolog 2 protein 99.7 5.2E-18 1.8E-22 164.6 11.6 151 63-215 7-168 (220)
263 2v70_A SLIT-2, SLIT homolog 2 99.7 3.9E-18 1.3E-22 165.5 10.0 152 63-215 7-169 (220)
264 2o6s_A Variable lymphocyte rec 99.7 1.4E-17 4.7E-22 160.1 13.5 152 63-215 3-164 (208)
265 1w8a_A SLIT protein; signaling 99.7 2.3E-18 7.7E-23 163.5 7.5 153 63-216 4-166 (192)
266 1ogq_A PGIP-2, polygalacturona 99.7 3.9E-18 1.3E-22 174.8 7.5 136 82-220 176-312 (313)
267 2o6r_A Variable lymphocyte rec 99.7 6.1E-17 2.1E-21 151.3 10.6 132 63-195 3-142 (177)
268 2wfh_A SLIT homolog 2 protein 99.6 8.7E-16 3E-20 145.6 10.5 134 64-215 7-142 (193)
269 3m19_A Variable lymphocyte rec 99.6 2.2E-15 7.5E-20 149.1 12.9 130 80-210 35-166 (251)
270 4gyi_A RIO2 kinase; protein ki 99.6 2.9E-15 1E-19 155.2 12.1 138 305-457 95-265 (397)
271 1w8a_A SLIT protein; signaling 99.6 2.5E-15 8.7E-20 142.3 10.5 128 83-214 11-141 (192)
272 2o6q_A Variable lymphocyte rec 99.6 3.4E-15 1.1E-19 149.5 11.6 113 81-195 38-151 (270)
273 3m19_A Variable lymphocyte rec 99.6 6.4E-15 2.2E-19 145.8 12.2 134 80-214 59-194 (251)
274 3rfs_A Internalin B, repeat mo 99.6 7.6E-15 2.6E-19 147.1 12.5 135 80-215 85-221 (272)
275 4fcg_A Uncharacterized protein 99.6 3.7E-15 1.3E-19 153.6 9.7 130 80-212 150-290 (328)
276 4g8a_A TOLL-like receptor 4; l 99.6 4.2E-15 1.5E-19 166.8 10.8 154 55-209 15-183 (635)
277 2v70_A SLIT-2, SLIT homolog 2 99.6 5.4E-15 1.9E-19 143.2 10.0 114 80-194 57-170 (220)
278 4b8c_D Glucose-repressible alc 99.6 1.6E-15 5.5E-20 172.7 5.5 111 82-197 226-336 (727)
279 3g39_A Variable lymphocyte rec 99.5 1.3E-14 4.3E-19 134.6 10.5 107 85-195 14-120 (170)
280 2wfh_A SLIT homolog 2 protein 99.5 2.1E-14 7.2E-19 136.0 11.5 112 80-193 31-142 (193)
281 2xot_A Amphoterin-induced prot 99.5 1.8E-14 6E-19 150.6 10.8 132 63-195 14-154 (361)
282 3v47_A TOLL-like receptor 5B a 99.5 1.1E-14 3.6E-19 157.1 9.2 145 65-210 6-165 (455)
283 2je0_A Acidic leucine-rich nuc 99.5 5.1E-15 1.7E-19 134.0 4.4 112 80-194 17-130 (149)
284 2v9t_B SLIT homolog 2 protein 99.5 4.7E-14 1.6E-18 136.6 10.3 111 80-192 56-167 (220)
285 1dce_A Protein (RAB geranylger 99.5 2.5E-14 8.5E-19 158.0 9.2 110 81-196 442-552 (567)
286 1ozn_A Reticulon 4 receptor; N 99.5 7.6E-14 2.6E-18 140.7 12.0 129 80-209 32-163 (285)
287 3vq2_A TLR4, TOLL-like recepto 99.5 6.3E-14 2.1E-18 156.8 12.2 118 80-198 32-150 (606)
288 1p9a_G Platelet glycoprotein I 99.5 7.9E-14 2.7E-18 141.0 11.8 131 81-214 78-210 (290)
289 3v47_A TOLL-like receptor 5B a 99.5 3E-14 1E-18 153.5 9.2 136 80-216 275-412 (455)
290 2o6s_A Variable lymphocyte rec 99.5 3.8E-14 1.3E-18 135.8 8.9 118 80-198 52-169 (208)
291 2o6q_A Variable lymphocyte rec 99.5 1E-13 3.6E-18 138.6 12.3 114 81-195 62-175 (270)
292 2z81_A CD282 antigen, TOLL-lik 99.5 1.9E-14 6.4E-19 159.0 7.5 128 66-195 3-141 (549)
293 2z66_A Variable lymphocyte rec 99.5 1.9E-14 6.6E-19 146.6 6.7 145 63-209 3-160 (306)
294 1ozn_A Reticulon 4 receptor; N 99.5 3E-14 1E-18 143.6 7.7 117 80-197 80-197 (285)
295 3rfs_A Internalin B, repeat mo 99.5 4.4E-14 1.5E-18 141.5 8.8 117 80-197 109-225 (272)
296 2z62_A TOLL-like receptor 4, v 99.5 1.1E-13 3.6E-18 138.9 11.2 129 80-209 28-159 (276)
297 2id5_A Lingo-1, leucine rich r 99.5 6.6E-14 2.3E-18 151.9 10.3 134 64-198 6-149 (477)
298 2r9u_A Variable lymphocyte rec 99.5 1.3E-13 4.4E-18 128.3 10.7 108 83-194 15-122 (174)
299 3oja_A Leucine-rich immune mol 99.5 3.1E-14 1.1E-18 154.8 7.3 142 67-214 109-252 (487)
300 2z66_A Variable lymphocyte rec 99.5 4.5E-14 1.5E-18 143.9 7.8 113 81-194 102-216 (306)
301 4eco_A Uncharacterized protein 99.5 9.6E-15 3.3E-19 164.3 2.9 113 80-194 206-347 (636)
302 3t6q_A CD180 antigen; protein- 99.5 1.1E-13 3.7E-18 154.8 10.7 140 69-209 14-163 (606)
303 2ell_A Acidic leucine-rich nuc 99.5 2.1E-14 7.3E-19 132.6 4.0 112 80-194 24-137 (168)
304 3e6j_A Variable lymphocyte rec 99.4 1.6E-13 5.6E-18 133.6 9.9 114 80-195 64-177 (229)
305 2xot_A Amphoterin-induced prot 99.4 7.2E-14 2.5E-18 146.0 7.4 135 79-215 63-205 (361)
306 2o6r_A Variable lymphocyte rec 99.4 3.6E-13 1.2E-17 125.5 11.3 128 83-214 10-139 (177)
307 3vq2_A TLR4, TOLL-like recepto 99.4 6.4E-14 2.2E-18 156.7 7.3 134 81-216 425-562 (606)
308 1ziw_A TOLL-like receptor 3; i 99.4 2.7E-13 9.2E-18 153.8 12.4 132 65-197 2-141 (680)
309 2z80_A TOLL-like receptor 2, v 99.4 7.9E-14 2.7E-18 145.1 7.3 142 65-210 28-185 (353)
310 2ft3_A Biglycan; proteoglycan, 99.4 3.8E-13 1.3E-17 138.7 12.3 143 63-209 29-182 (332)
311 3oja_B Anopheles plasmodium-re 99.4 1.5E-13 5.1E-18 153.5 9.6 116 81-197 52-167 (597)
312 2ifg_A High affinity nerve gro 99.4 1.4E-13 4.7E-18 142.9 8.5 111 66-192 7-118 (347)
313 4g8a_A TOLL-like receptor 4; l 99.4 1.4E-13 4.7E-18 154.4 8.4 135 80-215 445-583 (635)
314 1p9a_G Platelet glycoprotein I 99.4 3.8E-13 1.3E-17 136.0 10.8 113 80-196 31-143 (290)
315 4ecn_A Leucine-rich repeat pro 99.4 5E-14 1.7E-18 162.2 4.0 128 80-210 448-606 (876)
316 3zyi_A Leucine-rich repeat-con 99.4 4.5E-13 1.5E-17 144.4 10.5 130 65-195 50-189 (452)
317 3zyj_A Leucine-rich repeat-con 99.4 5.9E-13 2E-17 142.9 11.2 130 65-195 39-178 (440)
318 3j0a_A TOLL-like receptor 5; m 99.4 3E-13 1E-17 157.2 9.4 124 67-194 14-140 (844)
319 3cvr_A Invasion plasmid antige 99.4 2.2E-13 7.4E-18 149.9 7.4 122 68-210 49-171 (571)
320 2z62_A TOLL-like receptor 4, v 99.4 6.2E-13 2.1E-17 133.3 9.8 117 80-197 52-169 (276)
321 1xku_A Decorin; proteoglycan, 99.4 7.4E-13 2.5E-17 136.4 10.5 131 63-197 27-167 (330)
322 3t6q_A CD180 antigen; protein- 99.4 3.1E-13 1.1E-17 151.1 7.3 115 81-196 401-519 (606)
323 2z63_A TOLL-like receptor 4, v 99.4 5E-13 1.7E-17 148.2 8.7 133 82-215 398-534 (570)
324 1wwl_A Monocyte differentiatio 99.4 2.4E-13 8.1E-18 139.0 5.5 111 80-191 95-215 (312)
325 3oja_B Anopheles plasmodium-re 99.4 1.1E-12 3.8E-17 146.4 11.1 114 81-195 76-189 (597)
326 2xwt_C Thyrotropin receptor; s 99.4 5E-13 1.7E-17 130.9 7.2 143 64-210 7-167 (239)
327 4ezg_A Putative uncharacterize 99.4 4.6E-13 1.6E-17 127.2 6.6 110 81-195 45-154 (197)
328 3zyj_A Leucine-rich repeat-con 99.4 8.1E-13 2.8E-17 141.8 9.3 135 80-215 136-295 (440)
329 4b8c_D Glucose-repressible alc 99.4 1.1E-13 3.8E-18 157.5 2.4 115 80-198 247-362 (727)
330 3o6n_A APL1; leucine-rich repe 99.4 6.9E-13 2.4E-17 139.9 8.0 128 80-209 45-175 (390)
331 2ell_A Acidic leucine-rich nuc 99.4 1.2E-12 4.1E-17 120.8 8.5 108 80-191 49-161 (168)
332 2je0_A Acidic leucine-rich nuc 99.4 4.7E-13 1.6E-17 120.9 5.5 104 80-186 42-149 (149)
333 4glp_A Monocyte differentiatio 99.4 2E-12 7E-17 131.9 10.9 127 80-209 145-282 (310)
334 4ezg_A Putative uncharacterize 99.4 7.2E-13 2.5E-17 125.8 7.0 126 80-210 66-192 (197)
335 3g39_A Variable lymphocyte rec 99.3 2.6E-12 8.9E-17 118.9 9.1 106 106-215 11-118 (170)
336 1wwl_A Monocyte differentiatio 99.3 4.2E-13 1.4E-17 137.2 3.7 112 81-194 122-245 (312)
337 3zyi_A Leucine-rich repeat-con 99.3 2.1E-12 7.1E-17 139.1 9.2 136 80-215 147-306 (452)
338 2z81_A CD282 antigen, TOLL-lik 99.3 1.5E-12 5E-17 143.8 8.1 118 80-198 50-169 (549)
339 3a79_B TLR6, VLRB.59, TOLL-lik 99.3 1.3E-12 4.4E-17 144.8 7.4 109 79-190 352-463 (562)
340 3a79_B TLR6, VLRB.59, TOLL-lik 99.3 1.5E-12 5E-17 144.3 7.8 108 101-209 350-460 (562)
341 2z7x_B TOLL-like receptor 1, v 99.3 7.7E-13 2.6E-17 145.1 5.1 108 80-191 21-129 (520)
342 2z63_A TOLL-like receptor 4, v 99.3 1.6E-12 5.6E-17 144.0 7.5 116 80-196 421-537 (570)
343 3o6n_A APL1; leucine-rich repe 99.3 5.6E-12 1.9E-16 132.9 11.1 111 80-192 69-180 (390)
344 3j0a_A TOLL-like receptor 5; m 99.3 2.5E-12 8.6E-17 149.4 9.0 117 80-197 48-168 (844)
345 2z7x_B TOLL-like receptor 1, v 99.3 1.3E-12 4.5E-17 143.2 6.2 114 79-196 323-439 (520)
346 2r9u_A Variable lymphocyte rec 99.3 5.4E-12 1.8E-16 117.2 9.0 110 64-176 9-127 (174)
347 3oja_A Leucine-rich immune mol 99.3 9.9E-13 3.4E-17 142.9 4.2 31 343-373 322-352 (487)
348 3o53_A Protein LRIM1, AGAP0063 99.3 3.3E-12 1.1E-16 130.8 7.4 129 81-213 121-251 (317)
349 2z80_A TOLL-like receptor 2, v 99.3 3.8E-12 1.3E-16 132.3 7.6 116 80-198 76-195 (353)
350 2id5_A Lingo-1, leucine rich r 99.3 3.4E-12 1.2E-16 138.3 7.3 114 80-195 56-170 (477)
351 1ziw_A TOLL-like receptor 3; i 99.3 4E-12 1.4E-16 144.1 8.0 128 80-209 49-181 (680)
352 2ft3_A Biglycan; proteoglycan, 99.3 1.4E-11 4.9E-16 126.8 10.8 125 80-210 78-204 (332)
353 1a9n_A U2A', U2A'; complex (nu 99.2 4.6E-12 1.6E-16 117.9 5.8 103 81-190 20-126 (176)
354 1xku_A Decorin; proteoglycan, 99.2 1.2E-11 4.2E-16 127.2 9.7 126 80-210 145-274 (330)
355 4glp_A Monocyte differentiatio 99.2 5E-12 1.7E-16 129.0 5.4 109 81-190 92-210 (310)
356 1a9n_A U2A', U2A'; complex (nu 99.2 5E-12 1.7E-16 117.7 4.9 104 81-190 43-153 (176)
357 3tm0_A Aminoglycoside 3'-phosp 99.2 3.7E-11 1.3E-15 119.3 11.5 145 301-455 10-212 (263)
358 3cvr_A Invasion plasmid antige 99.2 1.8E-11 6.2E-16 134.6 9.9 111 80-209 80-190 (571)
359 1ds9_A Outer arm dynein; leuci 99.2 2.1E-13 7.1E-18 129.7 -6.3 105 81-191 19-129 (198)
360 1dce_A Protein (RAB geranylger 99.2 2E-11 6.8E-16 134.8 7.5 101 80-184 463-567 (567)
361 1h6t_A Internalin B; cell adhe 99.2 4.6E-11 1.6E-15 120.7 9.3 106 80-194 68-173 (291)
362 2xwt_C Thyrotropin receptor; s 99.2 1.2E-11 4E-16 121.2 4.7 127 80-210 55-190 (239)
363 2ifg_A High affinity nerve gro 99.2 2.1E-11 7.2E-16 126.4 6.8 106 107-215 11-119 (347)
364 1xeu_A Internalin C; cellular 99.2 3.2E-11 1.1E-15 120.0 7.5 103 80-192 63-165 (263)
365 1h6t_A Internalin B; cell adhe 99.1 4E-11 1.4E-15 121.1 7.7 121 80-210 90-211 (291)
366 1jl5_A Outer protein YOPM; leu 99.1 8.8E-11 3E-15 126.3 10.6 102 80-195 131-232 (454)
367 1ds9_A Outer arm dynein; leuci 99.1 3.1E-13 1.1E-17 128.4 -7.8 109 80-195 48-158 (198)
368 1m9s_A Internalin B; cell inva 99.1 5.9E-11 2E-15 131.8 9.2 106 80-194 65-170 (605)
369 3o53_A Protein LRIM1, AGAP0063 99.1 1.3E-11 4.4E-16 126.4 3.4 114 80-198 144-259 (317)
370 1h6u_A Internalin H; cell adhe 99.1 9.9E-11 3.4E-15 119.2 9.0 106 80-194 63-168 (308)
371 1xeu_A Internalin C; cellular 99.1 1.4E-10 4.7E-15 115.3 9.6 120 80-210 41-161 (263)
372 1m9s_A Internalin B; cell inva 99.1 8.9E-11 3E-15 130.4 8.7 121 80-210 87-208 (605)
373 1h6u_A Internalin H; cell adhe 99.1 7.9E-11 2.7E-15 120.0 7.2 121 80-210 85-206 (308)
374 3g06_A SSPH2 (leucine-rich rep 99.1 2.5E-11 8.7E-16 135.0 3.7 134 54-209 13-151 (622)
375 1nd4_A Aminoglycoside 3'-phosp 99.1 7.9E-11 2.7E-15 116.4 6.7 129 314-456 29-214 (264)
376 3bz5_A Internalin-J, INLJ; leu 99.1 1.2E-10 4.2E-15 125.3 8.4 121 80-210 170-297 (457)
377 4fmz_A Internalin; leucine ric 99.1 9.2E-11 3.1E-15 121.4 7.1 106 81-195 200-305 (347)
378 4ay9_X Follicle-stimulating ho 99.1 8E-11 2.8E-15 122.2 6.3 123 65-187 7-138 (350)
379 1jl5_A Outer protein YOPM; leu 99.1 1.3E-10 4.5E-15 125.0 7.9 58 131-196 319-378 (454)
380 3bz5_A Internalin-J, INLJ; leu 99.1 3.1E-10 1.1E-14 122.1 10.5 105 80-196 148-252 (457)
381 1o6v_A Internalin A; bacterial 99.0 2.3E-10 7.8E-15 123.6 8.1 103 81-192 244-346 (466)
382 4fmz_A Internalin; leucine ric 99.0 2.3E-10 7.8E-15 118.4 6.3 124 80-210 221-344 (347)
383 1o6v_A Internalin A; bacterial 99.0 5E-10 1.7E-14 120.9 8.9 121 80-209 221-341 (466)
384 3g06_A SSPH2 (leucine-rich rep 99.0 2.6E-10 8.9E-15 126.9 6.7 83 104-196 221-303 (622)
385 2ca6_A RAN GTPase-activating p 99.0 2.1E-11 7.3E-16 128.3 -3.0 130 80-210 159-314 (386)
386 3dxp_A Putative acyl-COA dehyd 99.0 1.6E-09 5.6E-14 112.6 10.9 141 310-457 43-249 (359)
387 2ast_B S-phase kinase-associat 98.9 4.2E-11 1.4E-15 123.3 -3.0 114 80-194 93-215 (336)
388 2ast_B S-phase kinase-associat 98.9 6.7E-11 2.3E-15 121.8 -1.8 109 81-191 71-183 (336)
389 2ca6_A RAN GTPase-activating p 98.9 2.7E-11 9.3E-16 127.5 -4.8 110 81-190 95-229 (386)
390 3goz_A Leucine-rich repeat-con 98.9 1.2E-10 4E-15 121.5 -0.1 113 81-193 23-154 (362)
391 3goz_A Leucine-rich repeat-con 98.9 2.8E-10 9.7E-15 118.6 0.3 114 81-194 52-184 (362)
392 3rw6_A Nuclear RNA export fact 98.8 1.3E-10 4.3E-15 114.8 -3.5 125 66-195 77-238 (267)
393 3sg8_A APH(2'')-ID; antibiotic 98.8 2.1E-09 7.2E-14 109.1 3.6 188 310-511 25-287 (304)
394 4ay9_X Follicle-stimulating ho 98.7 2.2E-08 7.6E-13 103.7 8.8 108 84-192 84-217 (350)
395 1z7x_W Ribonuclease inhibitor; 98.6 4.5E-10 1.5E-14 120.9 -7.0 113 80-193 227-357 (461)
396 3rw6_A Nuclear RNA export fact 98.6 3.6E-08 1.2E-12 97.2 5.1 80 101-183 167-257 (267)
397 1z7x_W Ribonuclease inhibitor; 98.6 1.5E-09 5.1E-14 116.7 -5.7 131 80-210 256-409 (461)
398 3r70_A Aminoglycoside phosphot 98.5 3.7E-07 1.3E-11 93.1 11.5 138 306-458 38-239 (320)
399 3un9_A NLR family member X1; l 98.5 8.7E-09 3E-13 107.5 -2.9 112 80-191 101-225 (372)
400 3d1u_A Putative fructosamine-3 98.3 1.6E-06 5.5E-11 86.9 10.7 141 309-455 19-215 (288)
401 4gkh_A Aminoglycoside 3'-phosp 98.3 3.4E-06 1.2E-10 83.5 11.2 135 312-456 31-223 (272)
402 3tdw_A Gentamicin resistance p 98.3 3.7E-06 1.3E-10 85.1 11.4 136 310-456 24-224 (306)
403 3un9_A NLR family member X1; l 98.2 1.8E-08 6.3E-13 105.1 -6.9 112 80-191 72-197 (372)
404 3ogk_B Coronatine-insensitive 98.2 4.8E-08 1.6E-12 108.5 -4.4 112 80-192 378-503 (592)
405 1io0_A Tropomodulin; LRR prote 98.2 9.5E-08 3.2E-12 89.3 -2.4 110 80-190 36-164 (185)
406 3ovc_A Hygromycin-B 4-O-kinase 98.2 1E-05 3.5E-10 83.9 12.0 146 307-457 43-244 (362)
407 3ats_A Putative uncharacterize 98.0 6.8E-06 2.3E-10 84.9 7.0 79 311-389 26-122 (357)
408 3ogk_B Coronatine-insensitive 97.9 4.4E-06 1.5E-10 92.5 3.6 105 80-186 164-279 (592)
409 3sb4_A Hypothetical leucine ri 97.9 1.3E-05 4.5E-10 81.8 6.1 84 103-190 225-310 (329)
410 2q83_A YTAA protein; 2635576, 97.8 4.9E-05 1.7E-09 77.7 10.1 141 311-455 38-251 (346)
411 2p1m_B Transport inhibitor res 97.8 7.5E-07 2.6E-11 98.8 -5.3 111 81-194 373-498 (594)
412 2olc_A MTR kinase, methylthior 97.7 8.9E-05 3E-09 77.7 9.7 74 310-385 35-120 (397)
413 3jr1_A Putative fructosamine-3 97.7 0.00023 7.7E-09 71.9 11.4 139 310-452 41-232 (312)
414 1io0_A Tropomodulin; LRR prote 97.6 4.5E-06 1.5E-10 77.8 -1.4 97 95-192 27-138 (185)
415 3f7w_A Putative fructosamine-3 97.6 0.00015 5E-09 72.4 9.5 77 307-387 17-97 (288)
416 3sb4_A Hypothetical leucine ri 97.6 7.1E-05 2.4E-09 76.3 6.3 98 82-182 228-326 (329)
417 2p1m_B Transport inhibitor res 97.5 8.5E-06 2.9E-10 90.2 -1.1 105 80-187 105-221 (594)
418 2ra8_A Uncharacterized protein 97.5 5.2E-06 1.8E-10 85.9 -3.3 108 80-192 172-294 (362)
419 3dxq_A Choline/ethanolamine ki 97.3 0.00051 1.7E-08 69.0 8.5 139 310-456 23-202 (301)
420 2pyw_A Uncharacterized protein 97.3 0.001 3.6E-08 70.1 11.1 80 425-508 231-313 (420)
421 1zyl_A Hypothetical protein YI 97.2 0.0029 1E-07 64.0 13.7 143 311-456 32-223 (328)
422 2ppq_A HSK, HK, homoserine kin 97.2 0.0013 4.3E-08 66.6 9.8 159 295-455 7-216 (322)
423 3rfe_A Platelet glycoprotein I 97.0 0.00083 2.8E-08 58.3 6.0 55 108-166 12-68 (130)
424 2ra8_A Uncharacterized protein 97.0 0.00017 5.7E-09 74.5 1.3 110 80-193 139-268 (362)
425 3csv_A Aminoglycoside phosphot 96.9 0.0032 1.1E-07 64.0 9.7 33 425-457 182-218 (333)
426 1nw1_A Choline kinase (49.2 KD 96.7 0.0035 1.2E-07 66.2 9.0 73 310-387 78-159 (429)
427 3rfe_A Platelet glycoprotein I 96.7 0.0027 9.3E-08 55.0 6.2 56 132-189 11-67 (130)
428 2qg7_A Ethanolamine kinase PV0 96.6 0.0052 1.8E-07 65.3 9.5 74 310-387 113-188 (458)
429 3c5i_A Choline kinase; choline 96.6 0.0021 7.2E-08 66.4 6.1 73 311-387 39-121 (369)
430 3feg_A Choline/ethanolamine ki 96.5 0.0054 1.8E-07 63.5 8.7 142 311-456 56-254 (379)
431 3e4g_A ATP synthase subunit S, 96.4 0.0006 2E-08 62.2 0.1 85 80-164 61-150 (176)
432 4fdw_A Leucine rich hypothetic 96.3 0.0051 1.7E-07 64.3 7.0 95 82-184 159-255 (401)
433 4fdw_A Leucine rich hypothetic 96.2 0.0061 2.1E-07 63.7 6.6 102 81-187 227-333 (401)
434 3e4g_A ATP synthase subunit S, 95.7 0.00076 2.6E-08 61.5 -2.3 92 96-188 53-150 (176)
435 3i1a_A Spectinomycin phosphotr 95.7 0.029 9.8E-07 57.1 9.0 32 426-457 206-237 (339)
436 1pgv_A TMD-1, tropomodulin TMD 95.6 0.0014 4.7E-08 60.9 -1.2 83 80-163 41-136 (197)
437 3f2s_A CK, chetk-alpha, cholin 95.3 0.043 1.5E-06 57.0 9.0 142 311-456 58-280 (401)
438 2yle_A Protein spire homolog 1 95.1 0.22 7.4E-06 46.6 12.0 100 384-506 32-131 (229)
439 3mes_A Choline kinase; malaria 94.2 0.056 1.9E-06 56.6 6.4 73 311-387 76-157 (424)
440 1pgv_A TMD-1, tropomodulin TMD 93.7 0.008 2.7E-07 55.8 -1.2 88 99-187 36-136 (197)
441 4h09_A Hypothetical leucine ri 91.6 0.3 1E-05 50.1 7.3 82 99-184 235-317 (379)
442 4gt6_A Cell surface protein; l 89.8 0.27 9.2E-06 50.8 4.9 102 81-189 266-369 (394)
443 4fs7_A Uncharacterized protein 89.5 0.31 1E-05 50.4 5.1 84 98-187 291-376 (394)
444 4gt6_A Cell surface protein; l 89.0 0.67 2.3E-05 47.8 7.3 85 97-187 258-344 (394)
445 3g15_A CK, chetk-alpha, cholin 88.9 1.1 3.7E-05 46.4 8.7 29 428-456 246-280 (401)
446 2ks1_B Epidermal growth factor 88.7 0.14 4.8E-06 34.4 1.2 31 227-258 8-38 (44)
447 4fs7_A Uncharacterized protein 87.7 0.48 1.6E-05 48.9 5.1 84 96-187 268-353 (394)
448 4ann_A ESSB; membrane protein, 87.1 1.2 4.2E-05 41.4 6.9 116 358-512 43-158 (215)
449 2l2t_A Receptor tyrosine-prote 85.8 0.22 7.6E-06 33.4 0.8 32 226-258 6-37 (44)
450 4ano_A ESSB; membrane protein, 85.5 2 6.7E-05 40.2 7.5 114 358-512 48-163 (219)
451 4h09_A Hypothetical leucine ri 83.2 1.6 5.6E-05 44.4 6.5 30 131-161 288-318 (379)
452 2jwa_A Receptor tyrosine-prote 79.9 0.41 1.4E-05 32.0 0.3 28 230-259 12-39 (44)
453 2k1k_A Ephrin type-A receptor 70.8 1.3 4.5E-05 28.7 0.9 25 227-251 8-32 (38)
454 3cxl_A N-chimerin; SH2, RHO-GA 70.4 0.6 2E-05 49.4 -1.3 58 311-371 148-215 (463)
455 2klu_A T-cell surface glycopro 36.1 13 0.00046 26.9 1.3 23 235-257 12-34 (70)
456 2k9y_A Ephrin type-A receptor 26.5 25 0.00084 22.8 1.3 11 232-242 15-25 (41)
457 1cja_A Protein (actin-fragmin 20.6 1.7E+02 0.0057 29.0 6.4 136 312-456 76-237 (342)
No 1
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00 E-value=1.4e-52 Score=426.44 Aligned_cols=261 Identities=22% Similarity=0.378 Sum_probs=206.7
Q ss_pred ccCcccceeeccCccEEEEEEeC------CCcEEEEEEecccc-ccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeE
Q 006982 305 NSFSKNNIIGSGRTGTMYKALLE------DGTSLMVKRLQDSQ-RSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLL 377 (623)
Q Consensus 305 ~~f~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 377 (623)
++|...+.||+|+||.||+|++. ++..||||+++... ...++|.+|+++|++++|||||+++|+|.+.+..++
T Consensus 13 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~l 92 (299)
T 4asz_A 13 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIM 92 (299)
T ss_dssp GGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEE
T ss_pred HHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEEE
Confidence 45777889999999999999864 47789999997643 445789999999999999999999999999999999
Q ss_pred EEecCCCCCHhhhccCCC---------CCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEE
Q 006982 378 VYKHMPNGSLYDLLHPAD---------DTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKI 448 (623)
Q Consensus 378 V~e~~~~gsL~~~l~~~~---------~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl 448 (623)
||||+++|+|.++|+... .....++|.++++|+.|+|+||+|||++ +|+||||||+|||+++++.+||
T Consensus 93 V~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDlKp~NILl~~~~~~Ki 169 (299)
T 4asz_A 93 VFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQ---HFVHRDLATRNCLVGENLLVKI 169 (299)
T ss_dssp EEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEE
T ss_pred EEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCccCHhhEEECCCCcEEE
Confidence 999999999999996532 2345799999999999999999999999 9999999999999999999999
Q ss_pred eecccccccCCCCCcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCcccccccHHHH
Q 006982 449 SDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVT-GERPTNVAKAPETFKGNLVEW 527 (623)
Q Consensus 449 ~Dfgla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~ellt-g~~P~~~~~~~~~~~~~l~~~ 527 (623)
+|||+++.....+... ......||+.|||||++.+..|+.++|||||||++|||+| |+.||..... .+.
T Consensus 170 ~DFGla~~~~~~~~~~--~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~--------~~~ 239 (299)
T 4asz_A 170 GDFGMSRDVYSTDYYR--VGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSN--------NEV 239 (299)
T ss_dssp CCCSCHHHHTGGGCEE--ETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCH--------HHH
T ss_pred CCcccceecCCCCcee--ecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCH--------HHH
Confidence 9999998765432211 1122348999999999999999999999999999999999 8999975322 111
Q ss_pred HHHHhccCchhhhhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHhhcc
Q 006982 528 IAQLSSTGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAIGER 589 (623)
Q Consensus 528 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~L~~i~~~ 589 (623)
+...... .... .....++++ .+++..|+. .||++||||+||++.|+++.+.
T Consensus 240 ~~~i~~~-~~~~------~p~~~~~~~---~~li~~cl~-~dP~~RPs~~~i~~~L~~~~~~ 290 (299)
T 4asz_A 240 IECITQG-RVLQ------RPRTCPQEV---YELMLGCWQ-REPHMRKNIKGIHTLLQNLAKA 290 (299)
T ss_dssp HHHHHHT-CCCC------CCTTCCHHH---HHHHHHHTC-SSGGGSCCHHHHHHHHHHHHHH
T ss_pred HHHHHcC-CCCC------CCccchHHH---HHHHHHHcC-CChhHCcCHHHHHHHHHHHHhc
Confidence 1111111 1000 011233444 455567877 9999999999999999998653
No 2
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00 E-value=5.3e-52 Score=427.97 Aligned_cols=261 Identities=23% Similarity=0.380 Sum_probs=201.6
Q ss_pred ccCcccceeeccCccEEEEEEeC------CCcEEEEEEecccc-ccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeE
Q 006982 305 NSFSKNNIIGSGRTGTMYKALLE------DGTSLMVKRLQDSQ-RSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLL 377 (623)
Q Consensus 305 ~~f~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 377 (623)
++|...+.||+|+||.||+|++. +++.||||+++... ...++|.+|+++|++++|||||+++++|.+.+..++
T Consensus 41 ~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~l 120 (329)
T 4aoj_A 41 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLM 120 (329)
T ss_dssp GGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEE
T ss_pred HHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEE
Confidence 45667789999999999999864 47889999997643 345789999999999999999999999999999999
Q ss_pred EEecCCCCCHhhhccCCCC-----------CCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCe
Q 006982 378 VYKHMPNGSLYDLLHPADD-----------TGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEP 446 (623)
Q Consensus 378 V~e~~~~gsL~~~l~~~~~-----------~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~ 446 (623)
||||+++|+|.++++.... ....++|.++++|+.|+|+||+|||+. +|+||||||+|||+++++.+
T Consensus 121 V~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDLKp~NILl~~~~~~ 197 (329)
T 4aoj_A 121 VFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGL---HFVHRDLATRNCLVGQGLVV 197 (329)
T ss_dssp EEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEETTTEE
T ss_pred EEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcC---CeecccccHhhEEECCCCcE
Confidence 9999999999999975432 124699999999999999999999999 99999999999999999999
Q ss_pred EEeecccccccCCCCCcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCcccccccHH
Q 006982 447 KISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVT-GERPTNVAKAPETFKGNLV 525 (623)
Q Consensus 447 kl~Dfgla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~ellt-g~~P~~~~~~~~~~~~~l~ 525 (623)
||+|||+++.....+.. .......||+.|||||++.+..++.++|||||||++|||+| |+.||......
T Consensus 198 Ki~DFGla~~~~~~~~~--~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~~-------- 267 (329)
T 4aoj_A 198 KIGDFGMSRDIYSTDYY--RVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNT-------- 267 (329)
T ss_dssp EECCCC------------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCHH--------
T ss_pred EEcccccceeccCCCcc--eecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCCHH--------
Confidence 99999999976543221 11223458999999999999999999999999999999999 89999753221
Q ss_pred HHHHHHhccCchhhhhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHhhcc
Q 006982 526 EWIAQLSSTGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAIGER 589 (623)
Q Consensus 526 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~L~~i~~~ 589 (623)
+.+......... . .....++++ .+++..|+. .||++||||+||++.|+.+.+.
T Consensus 268 ~~~~~i~~g~~~-~------~p~~~~~~~---~~li~~cl~-~dP~~RPs~~ei~~~L~~l~~~ 320 (329)
T 4aoj_A 268 EAIDCITQGREL-E------RPRACPPEV---YAIMRGCWQ-REPQQRHSIKDVHARLQALAQA 320 (329)
T ss_dssp HHHHHHHHTCCC-C------CCTTCCHHH---HHHHHHHCC-SSTTTSCCHHHHHHHHHHHHHS
T ss_pred HHHHHHHcCCCC-C------CcccccHHH---HHHHHHHcC-cChhHCcCHHHHHHHHHHHhhC
Confidence 111111111110 0 111234444 445567877 9999999999999999998764
No 3
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00 E-value=3.7e-52 Score=425.19 Aligned_cols=256 Identities=22% Similarity=0.359 Sum_probs=203.5
Q ss_pred CcccceeeccCccEEEEEEeC------CCcEEEEEEecccc--ccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEE
Q 006982 307 FSKNNIIGSGRTGTMYKALLE------DGTSLMVKRLQDSQ--RSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLV 378 (623)
Q Consensus 307 f~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV 378 (623)
+...+.||+|+||.||+|.+. +++.||||+++... ...++|.+|+.++++++|||||+++|+|.+++..++|
T Consensus 28 ~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~lV 107 (308)
T 4gt4_A 28 VRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMI 107 (308)
T ss_dssp EEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEE
T ss_pred CeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECCEEEEE
Confidence 445678999999999999863 46789999997543 3467899999999999999999999999999999999
Q ss_pred EecCCCCCHhhhccCCCC------------CCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCe
Q 006982 379 YKHMPNGSLYDLLHPADD------------TGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEP 446 (623)
Q Consensus 379 ~e~~~~gsL~~~l~~~~~------------~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~ 446 (623)
|||+++|+|.++|+.... ....++|..+++|+.|+|+||+|||+. +|+||||||+||||++++.+
T Consensus 108 ~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDLK~~NILl~~~~~~ 184 (308)
T 4gt4_A 108 FSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSH---HVVHKDLATRNVLVYDKLNV 184 (308)
T ss_dssp EECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCE
T ss_pred EEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhC---CCCCCCccccceEECCCCCE
Confidence 999999999999964321 124689999999999999999999999 99999999999999999999
Q ss_pred EEeecccccccCCCCCcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCcccccccHH
Q 006982 447 KISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVT-GERPTNVAKAPETFKGNLV 525 (623)
Q Consensus 447 kl~Dfgla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~ellt-g~~P~~~~~~~~~~~~~l~ 525 (623)
||+|||+++.+...+.. .......||+.|||||++.+..|+.++|||||||++|||+| |+.||...... .+.
T Consensus 185 Ki~DFGlar~~~~~~~~--~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~~-----~~~ 257 (308)
T 4gt4_A 185 KISDLGLFREVYAADYY--KLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQ-----DVV 257 (308)
T ss_dssp EECCSCCBCGGGGGGCB--CSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCCHH-----HHH
T ss_pred EECCcccceeccCCCce--eEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCCHH-----HHH
Confidence 99999999876443221 12234468999999999999999999999999999999999 89999753221 111
Q ss_pred HHHHHHhccCchhhhhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHh
Q 006982 526 EWIAQLSSTGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAI 586 (623)
Q Consensus 526 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~L~~i 586 (623)
..+. .+..... .+..+++ +.+++..|+. .||++||||+||++.|+.+
T Consensus 258 ~~i~----~~~~~~~------p~~~~~~---~~~li~~C~~-~dP~~RPs~~ei~~~L~a~ 304 (308)
T 4gt4_A 258 EMIR----NRQVLPC------PDDCPAW---VYALMIECWN-EFPSRRPRFKDIHSRLRAW 304 (308)
T ss_dssp HHHH----TTCCCCC------CTTCCHH---HHHHHHHHTC-SSGGGSCCHHHHHHHHHTS
T ss_pred HHHH----cCCCCCC------cccchHH---HHHHHHHHcC-CChhHCcCHHHHHHHHHhc
Confidence 1111 1111111 1123333 4455667887 9999999999999999865
No 4
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=3e-51 Score=419.13 Aligned_cols=274 Identities=21% Similarity=0.279 Sum_probs=205.9
Q ss_pred ccCcccceeeccCccEEEEEEeCCCcEEEEEEeccccccHHHHHHHHHHhCCCCCCCCcceeEEEEeCC----eeeEEEe
Q 006982 305 NSFSKNNIIGSGRTGTMYKALLEDGTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGFCMAKK----ERLLVYK 380 (623)
Q Consensus 305 ~~f~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~----~~~lV~e 380 (623)
++|...+.||+|+||+||+|++ +|+.||||++.........++.|+..+.+++|||||+++++|.+++ ..++|||
T Consensus 3 r~i~L~~~iG~G~fG~Vy~~~~-~g~~VAvK~l~~~~~~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV~E 81 (303)
T 3hmm_A 3 RTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSD 81 (303)
T ss_dssp GGEEEEEEEEECSSSEEEEEEE-TTEEEEEEEECGGGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEE
T ss_pred cEEEEEEEEeeCCCeEEEEEEE-CCEEEEEEEECccchhhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEEec
Confidence 3566778999999999999998 5899999999766544445566778888999999999999998754 5789999
Q ss_pred cCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhc-----CCCCcEecCCCCCceeeCCCCCeEEeeccccc
Q 006982 381 HMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHN-----CNPRIIHRNISSKCILLDDDFEPKISDFGLAR 455 (623)
Q Consensus 381 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~-----~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~ 455 (623)
|+++|+|.++++. ..++|..+++++.|+++||+|||++ ..++|+||||||+|||+++++++||+|||+++
T Consensus 82 y~~~gsL~~~l~~-----~~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~ 156 (303)
T 3hmm_A 82 YHEHGSLFDYLNR-----YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAV 156 (303)
T ss_dssp CCTTCBHHHHHHH-----CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCE
T ss_pred CCCCCcHHHHHHh-----CCCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCCCCc
Confidence 9999999999963 4589999999999999999999986 35689999999999999999999999999998
Q ss_pred ccCCCCCcccccccCCCCcccccCcccccCC------CCCcchhHHHHHHHHHHHHhCCCCCCCCCCccccc-------c
Q 006982 456 LMNPIDTHLSTFVNGEFGDLGYVAPEYARTL------VATPKGDVYSFGTVLLELVTGERPTNVAKAPETFK-------G 522 (623)
Q Consensus 456 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~------~~s~k~DV~sfGvil~elltg~~P~~~~~~~~~~~-------~ 522 (623)
.................||+.|||||++.+. .++.++|||||||++|||+||+.||.......... .
T Consensus 157 ~~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~~~~~ 236 (303)
T 3hmm_A 157 RHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDP 236 (303)
T ss_dssp EEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSC
T ss_pred cccCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhcccccc
Confidence 7654333222223345699999999998754 46789999999999999999998875432211100 1
Q ss_pred cHHHHHHHHhccCchhhhhchhhhcC-CCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHhhccc
Q 006982 523 NLVEWIAQLSSTGQLQDAIDKCLVAK-GVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAIGERY 590 (623)
Q Consensus 523 ~l~~~~~~~~~~~~~~~~~d~~l~~~-~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~L~~i~~~~ 590 (623)
......... .... .++.+... ...+....+.+++..|+. .||++||||.||++.|+++.++.
T Consensus 237 ~~~~~~~~~-~~~~----~rp~~p~~~~~~~~~~~l~~li~~cl~-~dP~~RPt~~ei~~~L~~l~~~~ 299 (303)
T 3hmm_A 237 SVEEMRKVV-CEQK----LRPNIPNRWQSCEALRVMAKIMRECWY-ANGAARLTALRIKKTLSQLSQQE 299 (303)
T ss_dssp CHHHHHHHH-TTSC----CCCCCCGGGGSSHHHHHHHHHHHTTCC-SSGGGSCCHHHHHHHHHHHHHC-
T ss_pred hHHHHHHHH-hccc----CCCCCCccccchHHHHHHHHHHHHHcc-cCHhHCcCHHHHHHHHHHHHHHc
Confidence 111111111 1111 11111110 122445567788889988 99999999999999999987653
No 5
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00 E-value=5.9e-51 Score=414.65 Aligned_cols=261 Identities=26% Similarity=0.417 Sum_probs=198.6
Q ss_pred ccCcccceeeccCccEEEEEEeCCCcEEEEEEecccc---ccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEEec
Q 006982 305 NSFSKNNIIGSGRTGTMYKALLEDGTSLMVKRLQDSQ---RSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKH 381 (623)
Q Consensus 305 ~~f~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 381 (623)
+++...+.||+|+||+||+|++++ .||||+++... ...+.|.+|++++++++|||||++++++.+ +..++||||
T Consensus 36 ~~l~l~~~iG~G~fG~Vy~~~~~~--~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~-~~~~iVmEy 112 (307)
T 3omv_A 36 SEVMLSTRIGSGSFGTVYKGKWHG--DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAIVTQW 112 (307)
T ss_dssp TSCCEEEECCCCSSSEEEEEESSS--EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEEEEC
T ss_pred HHeEEeeEEeeCCCcEEEEEEECC--cEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC-CeEEEEEEc
Confidence 456778899999999999999764 58999986432 345679999999999999999999998864 568999999
Q ss_pred CCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCCCC
Q 006982 382 MPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPID 461 (623)
Q Consensus 382 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~~~ 461 (623)
+++|+|.++|+.. ...++|.+++.|+.|+|.||+|||++ +|+||||||+|||+++++.+||+|||+|+......
T Consensus 113 ~~gGsL~~~l~~~---~~~l~~~~~~~i~~qia~gL~yLH~~---~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~ 186 (307)
T 3omv_A 113 CEGSSLYKHLHVQ---ETKFQMFQLIDIARQTAQGMDYLHAK---NIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWS 186 (307)
T ss_dssp CSSCBHHHHHHTS---CCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCCSSSEEEETTEEEEECCCSSCBC-----
T ss_pred CCCCCHHHHHhhc---CCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCccCHHHEEECCCCcEEEeeccCceecccCC
Confidence 9999999999643 24699999999999999999999999 99999999999999999999999999998764322
Q ss_pred CcccccccCCCCcccccCcccccC---CCCCcchhHHHHHHHHHHHHhCCCCCCCCCCcccccccHHHHHHHHhccCchh
Q 006982 462 THLSTFVNGEFGDLGYVAPEYART---LVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQ 538 (623)
Q Consensus 462 ~~~~~~~~~~~gt~~y~aPE~~~~---~~~s~k~DV~sfGvil~elltg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 538 (623)
.. .......||+.|||||++.+ ..|+.++|||||||++|||+||+.||....... .+...+..........
T Consensus 187 ~~--~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~~----~~~~~~~~~~~~p~~~ 260 (307)
T 3omv_A 187 GS--QQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRD----QIIFMVGRGYASPDLS 260 (307)
T ss_dssp ---------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHH----HHHHHHHTTCCCCCST
T ss_pred cc--eeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChHH----HHHHHHhcCCCCCCcc
Confidence 11 12233469999999999853 468999999999999999999999997543211 1111111111111111
Q ss_pred hhhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHhhccc
Q 006982 539 DAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAIGERY 590 (623)
Q Consensus 539 ~~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~L~~i~~~~ 590 (623)
.+ ....+++ +.+++..|+. .||++||||+||++.|+.++...
T Consensus 261 ~~------~~~~~~~---l~~li~~cl~-~dP~~RPs~~ei~~~Le~l~~~l 302 (307)
T 3omv_A 261 KL------YKNCPKA---MKRLVADCVK-KVKEERPLFPQILSSIELLQHSL 302 (307)
T ss_dssp TS------CTTSCHH---HHHHHHHHTC-SSSTTSCCHHHHHHHHHHHHTTC
T ss_pred cc------cccchHH---HHHHHHHHcC-CCHhHCcCHHHHHHHHHHHhccC
Confidence 11 1112334 4445567887 99999999999999999887543
No 6
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00 E-value=1.4e-48 Score=400.91 Aligned_cols=258 Identities=19% Similarity=0.199 Sum_probs=201.5
Q ss_pred ccCcccceeeccCccEEEEEEeC-CCcEEEEEEeccccccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEEecCC
Q 006982 305 NSFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKHMP 383 (623)
Q Consensus 305 ~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~ 383 (623)
+.|...++||+|+||.||+|+.+ +|+.||||+++.... ..+|++++++++|||||++++++.+.+..|+||||++
T Consensus 58 ~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~----~~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~~ 133 (336)
T 4g3f_A 58 HWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF----RVEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLE 133 (336)
T ss_dssp TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC----CTHHHHTTTTCCCTTBCCEEEEEEETTEEEEEECCCT
T ss_pred hheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh----HHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeccC
Confidence 46777889999999999999964 689999999975432 2469999999999999999999999999999999999
Q ss_pred CCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCC-CeEEeecccccccCCCCC
Q 006982 384 NGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDF-EPKISDFGLARLMNPIDT 462 (623)
Q Consensus 384 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~-~~kl~Dfgla~~~~~~~~ 462 (623)
+|+|.++++. ...+++..+..++.|++.||+|||++ +|+||||||+|||++.++ .+||+|||+|+.+.....
T Consensus 134 gg~L~~~l~~----~~~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~~~ 206 (336)
T 4g3f_A 134 GGSLGQLIKQ----MGCLPEDRALYYLGQALEGLEYLHTR---RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGL 206 (336)
T ss_dssp TCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCCGGGEEECTTSCCEEECCCTTCEEC-----
T ss_pred CCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CceecccCHHHEEEeCCCCEEEEeeCCCCeEccCCCc
Confidence 9999999963 24699999999999999999999999 999999999999999887 699999999998754322
Q ss_pred ccc-ccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCcccccccHHHHHHHHhccCchhhhh
Q 006982 463 HLS-TFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAI 541 (623)
Q Consensus 463 ~~~-~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 541 (623)
... ......+||+.|||||++.+..|+.++|||||||++|||+||+.||......+. ...... ......++
T Consensus 207 ~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~----~~~i~~---~~~~~~~~- 278 (336)
T 4g3f_A 207 GKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPL----CLKIAS---EPPPIREI- 278 (336)
T ss_dssp -------CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSCC----HHHHHH---SCCGGGGS-
T ss_pred ccceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHH----HHHHHc---CCCCchhc-
Confidence 211 112234699999999999999999999999999999999999999976433221 111111 01111111
Q ss_pred chhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHhhccc
Q 006982 542 DKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAIGERY 590 (623)
Q Consensus 542 d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~L~~i~~~~ 590 (623)
....++++.+++ ..|+. .||++|||+.|+++.|....++.
T Consensus 279 -----~~~~s~~~~~li---~~~L~-~dP~~R~sa~el~~~l~~~l~~~ 318 (336)
T 4g3f_A 279 -----PPSCAPLTAQAI---QEGLR-KEPVHRASAMELRRKVGKALQEV 318 (336)
T ss_dssp -----CTTSCHHHHHHH---HHHTC-SSGGGSCCHHHHHHHHHHHHHHT
T ss_pred -----CccCCHHHHHHH---HHHcc-CCHhHCcCHHHHHHHHHHHHhhh
Confidence 112344444444 45665 99999999999999998765543
No 7
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00 E-value=1.9e-49 Score=412.25 Aligned_cols=269 Identities=23% Similarity=0.339 Sum_probs=209.4
Q ss_pred HHHHHHhccCcccceeeccCccEEEEEEeCC------CcEEEEEEecccc--ccHHHHHHHHHHhCCCCC-CCCcceeEE
Q 006982 298 SDLMKATNSFSKNNIIGSGRTGTMYKALLED------GTSLMVKRLQDSQ--RSEKEFVAEMATLGSVKN-RNLVPLLGF 368 (623)
Q Consensus 298 ~~l~~~~~~f~~~~~lG~G~~g~Vy~~~~~~------~~~vavK~~~~~~--~~~~~~~~e~~~l~~l~h-~niv~l~~~ 368 (623)
+++....++|...+.||+|+||.||+|.+.. ++.||||++.... ...+.|.+|+++|.+++| ||||+++|+
T Consensus 57 ~~wEi~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l~g~ 136 (353)
T 4ase_A 57 SKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGA 136 (353)
T ss_dssp HHHBCCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEE
T ss_pred cccEecHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEEEEE
Confidence 3444445788999999999999999998542 3579999997643 335679999999999976 899999999
Q ss_pred EEeC-CeeeEEEecCCCCCHhhhccCCCC------------CCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCC
Q 006982 369 CMAK-KERLLVYKHMPNGSLYDLLHPADD------------TGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISS 435 (623)
Q Consensus 369 ~~~~-~~~~lV~e~~~~gsL~~~l~~~~~------------~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~ 435 (623)
|.+. +..++|||||++|+|.++|+.... ....++|.+++.++.|||+||+|||++ +|+||||||
T Consensus 137 ~~~~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~---~iiHRDLK~ 213 (353)
T 4ase_A 137 CTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAA 213 (353)
T ss_dssp ECCTTSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSG
T ss_pred EEecCCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhC---CeecCccCc
Confidence 9765 568999999999999999964321 124589999999999999999999999 999999999
Q ss_pred CceeeCCCCCeEEeecccccccCCCCCcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCC
Q 006982 436 KCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVT-GERPTNVA 514 (623)
Q Consensus 436 ~NILl~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~ellt-g~~P~~~~ 514 (623)
+|||+++++.+||+|||+|+.+....... ......||+.|||||++.+..|+.++|||||||++|||+| |+.||...
T Consensus 214 ~NILl~~~~~vKi~DFGlar~~~~~~~~~--~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~ 291 (353)
T 4ase_A 214 RNILLSEKNVVKICDFGLARDIYKDPDYV--RKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGV 291 (353)
T ss_dssp GGEEECGGGCEEECCCGGGSCTTTCTTSE--EETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTC
T ss_pred cceeeCCCCCEEECcchhhhhcccCCCce--eeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCCC
Confidence 99999999999999999999765433221 1123358999999999999999999999999999999998 99999764
Q ss_pred CCcccccccHHHHHHHHhccCchhhhhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHhhcc
Q 006982 515 KAPETFKGNLVEWIAQLSSTGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAIGER 589 (623)
Q Consensus 515 ~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~L~~i~~~ 589 (623)
...+ .+...+.. +.... ..+..++++. +++..|+. .||++||||+||++.|+++.+.
T Consensus 292 ~~~~----~~~~~i~~----g~~~~------~p~~~~~~~~---~li~~c~~-~dP~~RPt~~eil~~L~~llq~ 348 (353)
T 4ase_A 292 KIDE----EFCRRLKE----GTRMR------APDYTTPEMY---QTMLDCWH-GEPSQRPTFSELVEHLGNLLQA 348 (353)
T ss_dssp CCSH----HHHHHHHH----TCCCC------CCTTCCHHHH---HHHHHHTC-SSGGGSCCHHHHHHHHHHHHHH
T ss_pred CHHH----HHHHHHHc----CCCCC------CCccCCHHHH---HHHHHHcC-cChhHCcCHHHHHHHHHHHHHH
Confidence 3321 11111111 10000 1122334444 45567877 9999999999999999998654
No 8
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00 E-value=3e-49 Score=407.84 Aligned_cols=249 Identities=21% Similarity=0.346 Sum_probs=195.2
Q ss_pred ccCcccceeeccCccEEEEEEeC-CCcEEEEEEecccc---ccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEEe
Q 006982 305 NSFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQ---RSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYK 380 (623)
Q Consensus 305 ~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e 380 (623)
++|...+.||+|+||.||+|+.. +|+.||+|++.... ...+.+.+|++++++++|||||++++++.+++..|+|||
T Consensus 24 e~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVmE 103 (350)
T 4b9d_A 24 EKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMD 103 (350)
T ss_dssp CCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred cceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEe
Confidence 57899999999999999999964 69999999996543 334678999999999999999999999999999999999
Q ss_pred cCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCCC
Q 006982 381 HMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPI 460 (623)
Q Consensus 381 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~~ 460 (623)
|+++|+|.+++.... +..+++.+++.++.|++.||+|||++ +|+||||||+|||+++++.+||+|||+|+.+...
T Consensus 104 y~~gg~L~~~i~~~~--~~~~~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~ 178 (350)
T 4b9d_A 104 YCEGGDLFKRINAQK--GVLFQEDQILDWFVQICLALKHVHDR---KILHRDIKSQNIFLTKDGTVQLGDFGIARVLNST 178 (350)
T ss_dssp CCTTCBHHHHHHHTT--TCCCCHHHHHHHHHHHHHHHHHHHHT---TCEETTCCGGGEEECTTCCEEECSTTEESCCCHH
T ss_pred CCCCCcHHHHHHHcC--CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCHHHEEECCCCCEEEcccccceeecCC
Confidence 999999999996432 35678999999999999999999999 9999999999999999999999999999976532
Q ss_pred CCcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCcccccccHHHHHHHHhccCchhhh
Q 006982 461 DTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDA 540 (623)
Q Consensus 461 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 540 (623)
.. .....+||+.|||||++.+..|+.++||||+||++|||+||+.||..... .+.+....... ..
T Consensus 179 ~~----~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~--------~~~~~~i~~~~-~~-- 243 (350)
T 4b9d_A 179 VE----LARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSM--------KNLVLKIISGS-FP-- 243 (350)
T ss_dssp HH----HHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSH--------HHHHHHHHHTC-CC--
T ss_pred cc----cccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCH--------HHHHHHHHcCC-CC--
Confidence 11 11223499999999999999999999999999999999999999975322 12122211111 00
Q ss_pred hchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHH
Q 006982 541 IDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQ 581 (623)
Q Consensus 541 ~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~ 581 (623)
+ .....++++.+++ ..|+. .||++|||++|+++
T Consensus 244 --~--~~~~~s~~~~~li---~~~L~-~dP~~R~s~~e~l~ 276 (350)
T 4b9d_A 244 --P--VSLHYSYDLRSLV---SQLFK-RNPRDRPSVNSILE 276 (350)
T ss_dssp --C--CCTTSCHHHHHHH---HHHTC-SSGGGSCCHHHHHT
T ss_pred --C--CCccCCHHHHHHH---HHHcc-CChhHCcCHHHHhc
Confidence 0 0112344555444 45665 99999999999986
No 9
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00 E-value=7.8e-49 Score=404.07 Aligned_cols=247 Identities=23% Similarity=0.350 Sum_probs=199.2
Q ss_pred ccCcccceeeccCccEEEEEEeC-CCcEEEEEEecccc-ccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEEecC
Q 006982 305 NSFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQ-RSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKHM 382 (623)
Q Consensus 305 ~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~ 382 (623)
+.|+..+.||+|+||.||+|+.. +|+.||+|++.... ...+.+.+|+++|++++|||||++++++.+.+..|+||||+
T Consensus 74 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~ 153 (346)
T 4fih_A 74 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFL 153 (346)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred HhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeCC
Confidence 45888899999999999999965 69999999996543 34456889999999999999999999999999999999999
Q ss_pred CCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCCCCC
Q 006982 383 PNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDT 462 (623)
Q Consensus 383 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~~~~ 462 (623)
++|+|.+++.. ..+++..+..++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+|+.+.....
T Consensus 154 ~gg~L~~~l~~-----~~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~ 225 (346)
T 4fih_A 154 EGGALTDIVTH-----TRMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVP 225 (346)
T ss_dssp TTEEHHHHHHH-----SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECCSSSC
T ss_pred CCCcHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEECCCCCEEEecCcCceecCCCCC
Confidence 99999999953 3589999999999999999999999 999999999999999999999999999998754332
Q ss_pred cccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCcccccccHHHHHHHHhccCchhhhhc
Q 006982 463 HLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAID 542 (623)
Q Consensus 463 ~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d 542 (623)
. ..+.+||+.|||||++.+..|+.++||||+||++|||++|+.||...... +........ ..
T Consensus 226 ~----~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~--------~~~~~i~~~------~~ 287 (346)
T 4fih_A 226 R----RKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPL--------KAMKMIRDN------LP 287 (346)
T ss_dssp C----BCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH--------HHHHHHHHS------SC
T ss_pred c----ccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHH--------HHHHHHHcC------CC
Confidence 2 22346999999999999999999999999999999999999999753221 111111110 00
Q ss_pred hhhh-cCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHH
Q 006982 543 KCLV-AKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQ 581 (623)
Q Consensus 543 ~~l~-~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~ 581 (623)
+.+. ....++++.+++ ..|+. .||++|||++|+++
T Consensus 288 ~~~~~~~~~s~~~~dli---~~~L~-~dP~~R~ta~e~l~ 323 (346)
T 4fih_A 288 PRLKNLHKVSPSLKGFL---DRLLV-RDPAQRATAAELLK 323 (346)
T ss_dssp CCCSCGGGSCHHHHHHH---HHHSC-SSTTTSCCHHHHTT
T ss_pred CCCCccccCCHHHHHHH---HHHcC-CChhHCcCHHHHhc
Confidence 0000 011234444444 45665 99999999999875
No 10
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00 E-value=1e-47 Score=387.97 Aligned_cols=245 Identities=25% Similarity=0.331 Sum_probs=189.3
Q ss_pred cccceeeccCccEEEEEEeC-CCcEEEEEEecccc---ccHHHHHHHHHHhCCCCCCCCcceeEEEEe----CCeeeEEE
Q 006982 308 SKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQ---RSEKEFVAEMATLGSVKNRNLVPLLGFCMA----KKERLLVY 379 (623)
Q Consensus 308 ~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~----~~~~~lV~ 379 (623)
...+.||+|+||.||+|... ++..||+|++.... ...+.|.+|++++++++|||||++++++.+ ....++||
T Consensus 29 ~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lvm 108 (290)
T 3fpq_A 29 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVT 108 (290)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEEE
T ss_pred EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEEE
Confidence 44567999999999999965 68899999996543 334678999999999999999999999875 24578999
Q ss_pred ecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeC-CCCCeEEeecccccccC
Q 006982 380 KHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLD-DDFEPKISDFGLARLMN 458 (623)
Q Consensus 380 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~-~~~~~kl~Dfgla~~~~ 458 (623)
||+++|+|.++++. ...+++..+..++.|++.||+|||++ .++|+||||||+|||++ +++.+||+|||+|+...
T Consensus 109 Ey~~gg~L~~~l~~----~~~l~~~~~~~~~~qi~~aL~ylH~~-~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~~ 183 (290)
T 3fpq_A 109 ELMTSGTLKTYLKR----FKVMKIKVLRSWCRQILKGLQFLHTR-TPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKR 183 (290)
T ss_dssp ECCCSCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHTS-SSCCCCCCCCGGGEEESSTTSCEEECCTTGGGGCC
T ss_pred eCCCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC-CCCEEecccChhheeEECCCCCEEEEeCcCCEeCC
Confidence 99999999999963 35689999999999999999999998 12399999999999998 47999999999998643
Q ss_pred CCCCcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCcccccccHHHHHHHHhccCchh
Q 006982 459 PIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQ 538 (623)
Q Consensus 459 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 538 (623)
.. ...+..||+.|||||++.+ .|+.++|||||||++|||+||+.||...... .......... ..
T Consensus 184 ~~------~~~~~~GTp~YmAPE~~~~-~y~~~~DiwSlGvilyelltg~~Pf~~~~~~-------~~~~~~i~~~-~~- 247 (290)
T 3fpq_A 184 AS------FAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNA-------AQIYRRVTSG-VK- 247 (290)
T ss_dssp TT------SBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSH-------HHHHHHHTTT-CC-
T ss_pred CC------ccCCcccCccccCHHHcCC-CCCcHHHHHHHHHHHHHHHHCCCCCCCCCcH-------HHHHHHHHcC-CC-
Confidence 31 1223469999999998865 6999999999999999999999999653221 1111111111 00
Q ss_pred hhhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHH
Q 006982 539 DAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQ 581 (623)
Q Consensus 539 ~~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~ 581 (623)
+........+++. .++..|+. .||++|||++|+++
T Consensus 248 ----~~~~~~~~~~~~~---~li~~~L~-~dP~~R~s~~e~l~ 282 (290)
T 3fpq_A 248 ----PASFDKVAIPEVK---EIIEGCIR-QNKDERYSIKDLLN 282 (290)
T ss_dssp ----CGGGGGCCCHHHH---HHHHHHSC-SSGGGSCCHHHHHT
T ss_pred ----CCCCCccCCHHHH---HHHHHHcc-CChhHCcCHHHHhc
Confidence 0001111233444 34456776 99999999999875
No 11
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00 E-value=5.4e-48 Score=391.97 Aligned_cols=249 Identities=19% Similarity=0.262 Sum_probs=201.6
Q ss_pred ccCcccceeeccCccEEEEEEe-CCCcEEEEEEeccc----cccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEE
Q 006982 305 NSFSKNNIIGSGRTGTMYKALL-EDGTSLMVKRLQDS----QRSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVY 379 (623)
Q Consensus 305 ~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~----~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 379 (623)
++|...+.||+|+||+||+|+. .+++.||+|++... ....+.+.+|++++++++|||||++++++++++..|+||
T Consensus 32 ~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yivm 111 (311)
T 4aw0_A 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL 111 (311)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 5699999999999999999996 47899999999653 234577899999999999999999999999999999999
Q ss_pred ecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCC
Q 006982 380 KHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNP 459 (623)
Q Consensus 380 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~ 459 (623)
||+++|+|.+++.. ...+++..+..++.|++.||+|||++ +|+||||||+|||+++++.+||+|||+|+.+..
T Consensus 112 Ey~~gG~L~~~i~~----~~~l~e~~~~~~~~qi~~al~ylH~~---~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~ 184 (311)
T 4aw0_A 112 SYAKNGELLKYIRK----IGSFDETCTRFYTAEIVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSP 184 (311)
T ss_dssp CCCTTEEHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTTCEECCT
T ss_pred ecCCCCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHeEEcCCCCEEEEEcCCceecCC
Confidence 99999999999963 35699999999999999999999999 999999999999999999999999999998754
Q ss_pred CCCcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCcccccccHHHHHHHHhccCchhh
Q 006982 460 IDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQD 539 (623)
Q Consensus 460 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 539 (623)
.... ....+.+||+.|||||++.+..|+.++||||+||++|||++|+.||...+.. +......... .
T Consensus 185 ~~~~--~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~--------~~~~~i~~~~-~-- 251 (311)
T 4aw0_A 185 ESKQ--ARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEG--------LIFAKIIKLE-Y-- 251 (311)
T ss_dssp TTTC--CCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHH--------HHHHHHHHTC-C--
T ss_pred CCCc--ccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH--------HHHHHHHcCC-C--
Confidence 3221 1223456999999999999999999999999999999999999999753221 1111111110 0
Q ss_pred hhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHH
Q 006982 540 AIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQF 582 (623)
Q Consensus 540 ~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~ 582 (623)
.+ .....+++..++ ..|+. .||++|||++|+...
T Consensus 252 ----~~-p~~~s~~~~dli---~~lL~-~dp~~R~t~~e~~~~ 285 (311)
T 4aw0_A 252 ----DF-PEKFFPKARDLV---EKLLV-LDATKRLGCEEMEGY 285 (311)
T ss_dssp ----CC-CTTCCHHHHHHH---HHHSC-SSGGGSTTSGGGTCH
T ss_pred ----CC-CcccCHHHHHHH---HHHcc-CCHhHCcChHHHcCC
Confidence 00 112334444444 45555 999999999987543
No 12
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00 E-value=4.1e-47 Score=400.80 Aligned_cols=247 Identities=23% Similarity=0.350 Sum_probs=199.8
Q ss_pred ccCcccceeeccCccEEEEEEeC-CCcEEEEEEecccc-ccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEEecC
Q 006982 305 NSFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQ-RSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKHM 382 (623)
Q Consensus 305 ~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~ 382 (623)
+.|...+.||+|+||.||+|... +|+.||+|++.... ...+.+.+|+++|++++|||||++++++.+.+..|+|||||
T Consensus 151 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVmEy~ 230 (423)
T 4fie_A 151 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFL 230 (423)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred HhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEEeCC
Confidence 46888999999999999999965 69999999996543 34456889999999999999999999999999999999999
Q ss_pred CCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCCCCC
Q 006982 383 PNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDT 462 (623)
Q Consensus 383 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~~~~ 462 (623)
++|+|.+++.. ..+++.++..++.|++.||+|||++ +|+||||||+||||+.++.+||+|||+|+.+.....
T Consensus 231 ~gG~L~~~i~~-----~~l~e~~~~~~~~qil~aL~ylH~~---~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~~~ 302 (423)
T 4fie_A 231 EGGALTDIVTH-----TRMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVP 302 (423)
T ss_dssp TTEEHHHHHHH-----SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSTTTEEECTTCCEEECCCTTCEECCSSCC
T ss_pred CCCcHHHHHhc-----cCCCHHHHHHHHHHHHHHHHHHHHC---CeecccCCHHHEEEcCCCCEEEecCccceECCCCCc
Confidence 99999999953 3589999999999999999999999 999999999999999999999999999998754332
Q ss_pred cccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCcccccccHHHHHHHHhccCchhhhhc
Q 006982 463 HLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAID 542 (623)
Q Consensus 463 ~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d 542 (623)
.. .+.+||+.|||||++.+..|+.++|||||||++|||++|+.||...... +........ ..
T Consensus 303 ~~----~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~--------~~~~~i~~~------~~ 364 (423)
T 4fie_A 303 RR----KSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPL--------KAMKMIRDN------LP 364 (423)
T ss_dssp CB----CCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH--------HHHHHHHHS------CC
T ss_pred cc----cccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHH--------HHHHHHHcC------CC
Confidence 22 2345999999999999999999999999999999999999999753221 111111100 00
Q ss_pred hhhh-cCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHH
Q 006982 543 KCLV-AKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQ 581 (623)
Q Consensus 543 ~~l~-~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~ 581 (623)
+.+. ....++++..++ ..|+. .||++|||++|+++
T Consensus 365 ~~~~~~~~~s~~~~dli---~~~L~-~dP~~R~ta~ell~ 400 (423)
T 4fie_A 365 PRLKNLHKVSPSLKGFL---DRLLV-RDPAQRATAAELLK 400 (423)
T ss_dssp CCCSCTTSSCHHHHHHH---HHHSC-SSTTTSCCHHHHTT
T ss_pred CCCcccccCCHHHHHHH---HHHcC-CChhHCcCHHHHhc
Confidence 0111 112344555444 45665 99999999999875
No 13
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=8.1e-47 Score=378.09 Aligned_cols=244 Identities=20% Similarity=0.338 Sum_probs=185.4
Q ss_pred ccCcccceeeccCccEEEEEEe-CCCcEEEEEEecccc----ccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEE
Q 006982 305 NSFSKNNIIGSGRTGTMYKALL-EDGTSLMVKRLQDSQ----RSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVY 379 (623)
Q Consensus 305 ~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~----~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 379 (623)
++|...+.||+|+||+||+|.. .+|+.||+|++.... .....+.+|++++++++|||||++++++.+++..++||
T Consensus 13 g~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivm 92 (275)
T 3hyh_A 13 GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVI 92 (275)
T ss_dssp -CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred eCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEE
Confidence 5799999999999999999995 479999999996532 33567899999999999999999999999999999999
Q ss_pred ecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCC
Q 006982 380 KHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNP 459 (623)
Q Consensus 380 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~ 459 (623)
||+ +|+|.+++.. ...+++..+..++.|++.||+|||++ +|+||||||+|||+++++.+||+|||+|+....
T Consensus 93 Ey~-~g~L~~~l~~----~~~l~e~~~~~~~~qi~~al~ylH~~---~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~ 164 (275)
T 3hyh_A 93 EYA-GNELFDYIVQ----RDKMSEQEARRFFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTD 164 (275)
T ss_dssp ECC-CEEHHHHHHH----SCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCTTTEEECTTCCEEECCSSCC-----
T ss_pred eCC-CCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCChHHeEECCCCCEEEeecCCCeecCC
Confidence 999 6899999863 34699999999999999999999999 999999999999999999999999999987643
Q ss_pred CCCcccccccCCCCcccccCcccccCCCC-CcchhHHHHHHHHHHHHhCCCCCCCCCCcccccccHHHHHHHHhccCchh
Q 006982 460 IDTHLSTFVNGEFGDLGYVAPEYARTLVA-TPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQ 538 (623)
Q Consensus 460 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-s~k~DV~sfGvil~elltg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 538 (623)
.. ...+..||+.|||||++.+..+ +.++||||+||++|||+||+.||..... ............
T Consensus 165 ~~-----~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~~--------~~~~~~i~~~~~-- 229 (275)
T 3hyh_A 165 GN-----FLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESI--------PVLFKNISNGVY-- 229 (275)
T ss_dssp ---------------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH--------HHHHHHHHHTCC--
T ss_pred CC-----ccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCCH--------HHHHHHHHcCCC--
Confidence 22 1223469999999999988776 5799999999999999999999975321 111121111100
Q ss_pred hhhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHH
Q 006982 539 DAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQ 581 (623)
Q Consensus 539 ~~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~ 581 (623)
.+ ....++++.+++ .+|+. .||++|||++|+++
T Consensus 230 -----~~-p~~~s~~~~~li---~~~L~-~dP~~R~s~~eil~ 262 (275)
T 3hyh_A 230 -----TL-PKFLSPGAAGLI---KRMLI-VNPLNRISIHEIMQ 262 (275)
T ss_dssp -----CC-CTTSCHHHHHHH---HHHSC-SSGGGSCCHHHHHH
T ss_pred -----CC-CCCCCHHHHHHH---HHHcc-CChhHCcCHHHHHc
Confidence 00 112344444444 45665 99999999999976
No 14
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00 E-value=2.7e-47 Score=386.73 Aligned_cols=199 Identities=23% Similarity=0.288 Sum_probs=168.8
Q ss_pred ccCcccceeeccCccEEEEEEeC----CCcEEEEEEecccc---ccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeE
Q 006982 305 NSFSKNNIIGSGRTGTMYKALLE----DGTSLMVKRLQDSQ---RSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLL 377 (623)
Q Consensus 305 ~~f~~~~~lG~G~~g~Vy~~~~~----~~~~vavK~~~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 377 (623)
++|+..+.||+|+||.||+|+.. .++.||+|+++... .....+.+|++++++++|||||++++++.+++..|+
T Consensus 24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~i 103 (304)
T 3ubd_A 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYL 103 (304)
T ss_dssp GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETTEEEE
T ss_pred cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEE
Confidence 56899999999999999999852 46789999996532 233468889999999999999999999999999999
Q ss_pred EEecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeeccccccc
Q 006982 378 VYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLM 457 (623)
Q Consensus 378 V~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~ 457 (623)
||||+++|+|.+++.. ...+++..+..++.|++.||+|||++ +|+||||||+|||+++++.+||+|||+|+..
T Consensus 104 vmEy~~gg~L~~~l~~----~~~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~~ 176 (304)
T 3ubd_A 104 ILDFLRGGDLFTRLSK----EVMFTEEDVKFYLAELALALDHLHSL---GIIYRDLKPENILLDEEGHIKLTDFGLSKES 176 (304)
T ss_dssp EECCCTTCEEHHHHHH----HCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECTTSCEEEESSEEEEC-
T ss_pred EEEcCCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHeEEcCCCCEEecccccceec
Confidence 9999999999999963 24689999999999999999999999 9999999999999999999999999999865
Q ss_pred CCCCCcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCC
Q 006982 458 NPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVA 514 (623)
Q Consensus 458 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~~ 514 (623)
...... ..+..||+.|||||++.+..|+.++||||+||++|||+||+.||...
T Consensus 177 ~~~~~~----~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~ 229 (304)
T 3ubd_A 177 IDHEKK----AYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGK 229 (304)
T ss_dssp ----CC----CCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred cCCCcc----ccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCc
Confidence 432221 23346999999999999999999999999999999999999999753
No 15
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00 E-value=5.5e-46 Score=378.45 Aligned_cols=252 Identities=19% Similarity=0.299 Sum_probs=182.4
Q ss_pred ccCcccceeeccCccEEEEEEeC-CCcEEEEEEecccc--ccHHHHHHHHHHhCCCCCCCCcceeEEEEeCC--------
Q 006982 305 NSFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQ--RSEKEFVAEMATLGSVKNRNLVPLLGFCMAKK-------- 373 (623)
Q Consensus 305 ~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-------- 373 (623)
++|+..+.||+|+||.||+|+.. +|+.||+|+++... ...+.+.+|+++|++++|||||++++++.+.+
T Consensus 5 ~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~ 84 (299)
T 4g31_A 5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPS 84 (299)
T ss_dssp HHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC--------
T ss_pred hhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCcccccccc
Confidence 46888999999999999999964 78999999986433 34567899999999999999999999987644
Q ss_pred ----eeeEEEecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEe
Q 006982 374 ----ERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKIS 449 (623)
Q Consensus 374 ----~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~ 449 (623)
..|+||||+++|+|.+++..... ....++..++.++.|++.||+|||++ +|+||||||+|||++.++.+||+
T Consensus 85 ~~~~~l~ivmE~~~gg~L~~~l~~~~~-~~~~~~~~~~~i~~qi~~al~ylH~~---~IiHRDlKp~NILl~~~~~vKl~ 160 (299)
T 4g31_A 85 SPKVYLYIQMQLCRKENLKDWMNGRCT-IEERERSVCLHIFLQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKVG 160 (299)
T ss_dssp --CEEEEEEEECCCSCCHHHHHHTCCS-GGGSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEEC
T ss_pred CCCcEEEEEEecCCCCcHHHHHHhcCC-CChhHHHHHHHHHHHHHHHHHHHHHC---cCccccCcHHHeEECCCCcEEEc
Confidence 36899999999999999975432 23456777899999999999999999 99999999999999999999999
Q ss_pred ecccccccCCCCCccc--------ccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCccccc
Q 006982 450 DFGLARLMNPIDTHLS--------TFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFK 521 (623)
Q Consensus 450 Dfgla~~~~~~~~~~~--------~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~~~~~~~~~ 521 (623)
|||+|+.+........ ....+.+||+.|||||++.+..|+.++|||||||++|||++ ||....
T Consensus 161 DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~~~------ 231 (299)
T 4g31_A 161 DFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQM------ 231 (299)
T ss_dssp CCCCC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSSHH------
T ss_pred cCccceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCCcc------
Confidence 9999997654322111 11223469999999999999999999999999999999996 774310
Q ss_pred ccHHHHHHHHhccCchhhhhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHH
Q 006982 522 GNLVEWIAQLSSTGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQ 581 (623)
Q Consensus 522 ~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~ 581 (623)
.....+... ......... .+.......+...|+. .||++|||+.|+++
T Consensus 232 -~~~~~~~~~-~~~~~p~~~---------~~~~~~~~~li~~~L~-~dP~~Rps~~eil~ 279 (299)
T 4g31_A 232 -ERVRTLTDV-RNLKFPPLF---------TQKYPCEYVMVQDMLS-PSPMERPEAINIIE 279 (299)
T ss_dssp -HHHHHHHHH-HTTCCCHHH---------HHHCHHHHHHHHHHTC-SSGGGSCCHHHHHT
T ss_pred -HHHHHHHHH-hcCCCCCCC---------cccCHHHHHHHHHHcC-CChhHCcCHHHHhc
Confidence 000001110 111110100 0111122344556666 99999999999876
No 16
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=100.00 E-value=2e-45 Score=380.90 Aligned_cols=292 Identities=40% Similarity=0.704 Sum_probs=251.6
Q ss_pred cccccCHHHHHHHhccCcccceeeccCccEEEEEEeCCCcEEEEEEecccc--ccHHHHHHHHHHhCCCCCCCCcceeEE
Q 006982 291 SITKMRLSDLMKATNSFSKNNIIGSGRTGTMYKALLEDGTSLMVKRLQDSQ--RSEKEFVAEMATLGSVKNRNLVPLLGF 368 (623)
Q Consensus 291 ~~~~~~~~~l~~~~~~f~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~ 368 (623)
....+++.++....++|...+.||+|+||.||+|...+++.||+|++.... .....+.+|++++.+++||||++++++
T Consensus 16 ~~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~ 95 (326)
T 3uim_A 16 QLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGF 95 (326)
T ss_dssp CCEECCTHHHHTTTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCCCCEE
T ss_pred ccceecHHHHHHHhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccceEEE
Confidence 345688899999999999999999999999999998889999999997643 223468999999999999999999999
Q ss_pred EEeCCeeeEEEecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEE
Q 006982 369 CMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKI 448 (623)
Q Consensus 369 ~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl 448 (623)
+.+....++||||+++|+|.+++.........++|..+..++.|++.||+|||+.+.++|+||||||+|||+++++.+||
T Consensus 96 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~~~~kl 175 (326)
T 3uim_A 96 CMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVV 175 (326)
T ss_dssp ECCSSCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTTCCEEE
T ss_pred EecCCceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCCCCEEe
Confidence 99999999999999999999999876555567999999999999999999999988889999999999999999999999
Q ss_pred eecccccccCCCCCcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCcccccccHHHHH
Q 006982 449 SDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWI 528 (623)
Q Consensus 449 ~Dfgla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~~~~~~~~~~~l~~~~ 528 (623)
+|||+++......... .....||+.|+|||++.+..++.++||||||+++|||++|+.||..............+|+
T Consensus 176 ~Dfg~~~~~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~ 252 (326)
T 3uim_A 176 GDFGLAKLMDYKDTHV---TTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWV 252 (326)
T ss_dssp CCCSSCEECCSSSSCE---ECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHHHHH
T ss_pred ccCccccccCcccccc---cccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccccchhHHHHH
Confidence 9999998765432221 2233489999999999888899999999999999999999999964322223345677888
Q ss_pred HHHhccCchhhhhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHh
Q 006982 529 AQLSSTGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAI 586 (623)
Q Consensus 529 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~L~~i 586 (623)
........+..+.+..+......+....+.+++..|+. .||++|||+.||+++|++.
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~-~dP~~Rps~~ell~~L~~~ 309 (326)
T 3uim_A 253 KGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQ-SSPMERPKMSEVVRMLEGD 309 (326)
T ss_dssp TTTTSSCCSTTSSCTTCTTSCCHHHHHHHHHHHHHHTC-SCGGGSCCHHHHHHHHHTS
T ss_pred HHHhhchhhhhhcChhhccccCHHHHHHHHHHHHHHhC-cCCccCCCHHHHHHHhcCc
Confidence 87777777888888887777778888889999999998 9999999999999999864
No 17
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=100.00 E-value=6.2e-44 Score=368.95 Aligned_cols=285 Identities=38% Similarity=0.595 Sum_probs=237.4
Q ss_pred CHHHHHHHhccCcccceeeccCccEEEEEEeCCCcEEEEEEecccc-ccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCe
Q 006982 296 RLSDLMKATNSFSKNNIIGSGRTGTMYKALLEDGTSLMVKRLQDSQ-RSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKE 374 (623)
Q Consensus 296 ~~~~l~~~~~~f~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~ 374 (623)
++.++...+++|...+.||+|+||.||+|..+++..||+|++.... ...+.+.+|++++.+++||||+++++++.+.+.
T Consensus 30 ~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 109 (321)
T 2qkw_B 30 PLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNE 109 (321)
T ss_dssp CCSCCCCCCCCCSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTBCCEEEECCCTTC
T ss_pred cHHHHHHHHhccCccceeecCCCeeEEEEEECCCCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCe
Confidence 3444556778999999999999999999999889999999987643 345678999999999999999999999999999
Q ss_pred eeEEEecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccc
Q 006982 375 RLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLA 454 (623)
Q Consensus 375 ~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla 454 (623)
.++||||+++|+|.+++.........++|..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 110 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~ 186 (321)
T 2qkw_B 110 MILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTR---AIIHRDVKSINILLDENFVPKITDFGIS 186 (321)
T ss_dssp CEEEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCSTTEEECTTCCEEECCCTTC
T ss_pred EEEEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCC---CeecCCCCHHHEEECCCCCEEEeecccc
Confidence 9999999999999999976554445799999999999999999999999 9999999999999999999999999999
Q ss_pred cccCCCCCcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCcccccccHHHHHHHHhcc
Q 006982 455 RLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSST 534 (623)
Q Consensus 455 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~~~~~~~~~~~l~~~~~~~~~~ 534 (623)
+........ .......||+.|+|||++.+..++.++||||||+++|||++|+.||......+ ......|.......
T Consensus 187 ~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~--~~~~~~~~~~~~~~ 262 (321)
T 2qkw_B 187 KKGTELDQT--HLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPRE--MVNLAEWAVESHNN 262 (321)
T ss_dssp EECSSSSCC--CCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSS--CCCHHHHTHHHHTT
T ss_pred ccccccccc--ccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHH--HHHHHHHhhhcccc
Confidence 865432211 11122347899999999988899999999999999999999999997654432 23455665555555
Q ss_pred CchhhhhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHhhc
Q 006982 535 GQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAIGE 588 (623)
Q Consensus 535 ~~~~~~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~L~~i~~ 588 (623)
..+.+.+++.+......+....+..++..|+. .||++|||+.||++.|+.+.+
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~-~dP~~Rps~~ell~~L~~~l~ 315 (321)
T 2qkw_B 263 GQLEQIVDPNLADKIRPESLRKFGDTAVKCLA-LSSEDRPSMGDVLWKLEYALR 315 (321)
T ss_dssp TCCCSSSSSSCTTCSCHHHHHHHHHHHHHHTC-SSGGGSCCHHHHHHHHHHHHH
T ss_pred ccHHHhcChhhccccCHHHHHHHHHHHHHHcC-CCcccCcCHHHHHHHHHHHhh
Confidence 55666666666555566677778888889988 999999999999999998754
No 18
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.1e-43 Score=375.07 Aligned_cols=203 Identities=21% Similarity=0.348 Sum_probs=171.7
Q ss_pred ccCcccceeeccCccEEEEEEe-CCCcEEEEEEecccc---ccHHHHHHHHHHhCCCCCCCCcceeEEEEeC------Ce
Q 006982 305 NSFSKNNIIGSGRTGTMYKALL-EDGTSLMVKRLQDSQ---RSEKEFVAEMATLGSVKNRNLVPLLGFCMAK------KE 374 (623)
Q Consensus 305 ~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~------~~ 374 (623)
++|...+.||+|+||.||+|.. .+|+.||||+++... ...+.+.+|+++|++++|||||++++++... +.
T Consensus 54 ~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~~ 133 (398)
T 4b99_A 54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKS 133 (398)
T ss_dssp SSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCCC
T ss_pred CCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCCE
Confidence 4688999999999999999996 479999999997543 2345688999999999999999999997643 56
Q ss_pred eeEEEecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccc
Q 006982 375 RLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLA 454 (623)
Q Consensus 375 ~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla 454 (623)
.|+||||++ |+|.+++.. ...+++..+..++.|++.||+|||++ +|+||||||+|||++.++.+||+|||++
T Consensus 134 ~~ivmE~~~-g~L~~~i~~----~~~l~~~~~~~~~~qil~al~ylH~~---~iiHRDlKP~NIl~~~~~~~Ki~DFGla 205 (398)
T 4b99_A 134 VYVVLDLME-SDLHQIIHS----SQPLTLEHVRYFLYQLLRGLKYMHSA---QVIHRDLKPSNLLVNENCELKIGDFGMA 205 (398)
T ss_dssp EEEEEECCS-EEHHHHHTS----SSCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTCCEEECCCTTC
T ss_pred EEEEEeCCC-CCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---cCcCCCcCccccccCCCCCEEEeeccee
Confidence 799999996 689999963 35799999999999999999999999 9999999999999999999999999999
Q ss_pred cccCCCCCcccccccCCCCcccccCcccccCC-CCCcchhHHHHHHHHHHHHhCCCCCCCCC
Q 006982 455 RLMNPIDTHLSTFVNGEFGDLGYVAPEYARTL-VATPKGDVYSFGTVLLELVTGERPTNVAK 515 (623)
Q Consensus 455 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~k~DV~sfGvil~elltg~~P~~~~~ 515 (623)
+.+............+.+||+.|||||++.+. .++.++||||+||++|||++|+.||.+..
T Consensus 206 ~~~~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~ 267 (398)
T 4b99_A 206 RGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKN 267 (398)
T ss_dssp BCC-------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSS
T ss_pred eecccCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCC
Confidence 87654322222333455799999999998765 56899999999999999999999997643
No 19
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=100.00 E-value=1.4e-42 Score=362.74 Aligned_cols=202 Identities=21% Similarity=0.317 Sum_probs=171.3
Q ss_pred HhccCcccceeeccCccEEEEEEeC----CCcEEEEEEeccccccHHHHHHHHHHhCCC-CCCCCcceeEEEEeCCeeeE
Q 006982 303 ATNSFSKNNIIGSGRTGTMYKALLE----DGTSLMVKRLQDSQRSEKEFVAEMATLGSV-KNRNLVPLLGFCMAKKERLL 377 (623)
Q Consensus 303 ~~~~f~~~~~lG~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~l 377 (623)
..+.|...+.||+|+||+||+|+.+ .++.||+|++.... ....+.+|++++.++ +|||||++++++.+.+..++
T Consensus 19 l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~-~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~~~~l 97 (361)
T 4f9c_A 19 LSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS-HPIRIAAELQCLTVAGGQDNVMGVKYCFRKNDHVVI 97 (361)
T ss_dssp GGGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTS-CHHHHHHHHHHHHHTCSBTTBCCCSEEEEETTEEEE
T ss_pred ccCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEcccc-CHHHHHHHHHHHHHhcCCCCCceEEEEEEECCEEEE
Confidence 4578999999999999999999853 46789999986543 345678999999988 69999999999999999999
Q ss_pred EEecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCC-CCeEEeecccccc
Q 006982 378 VYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDD-FEPKISDFGLARL 456 (623)
Q Consensus 378 V~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~-~~~kl~Dfgla~~ 456 (623)
||||+++|+|.+++. .+++.++..++.|++.||+|||++ +|+||||||+|||++.+ +.+||+|||+|+.
T Consensus 98 vmE~~~g~~L~~~~~-------~l~~~~~~~~~~qll~al~ylH~~---gIiHRDiKPeNiLl~~~~~~~kl~DFGla~~ 167 (361)
T 4f9c_A 98 AMPYLEHESFLDILN-------SLSFQEVREYMLNLFKALKRIHQF---GIVHRDVKPSNFLYNRRLKKYALVDFGLAQG 167 (361)
T ss_dssp EEECCCCCCHHHHHT-------TCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEETTTTEEEECCCTTCEE
T ss_pred EEeCCCcccHHHHHc-------CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCcCCHHHeEEeCCCCeEEECcCCCCcc
Confidence 999999999999993 488999999999999999999999 99999999999999876 7999999999986
Q ss_pred cCCCCCccc------------------------ccccCCCCcccccCcccccCC-CCCcchhHHHHHHHHHHHHhCCCCC
Q 006982 457 MNPIDTHLS------------------------TFVNGEFGDLGYVAPEYARTL-VATPKGDVYSFGTVLLELVTGERPT 511 (623)
Q Consensus 457 ~~~~~~~~~------------------------~~~~~~~gt~~y~aPE~~~~~-~~s~k~DV~sfGvil~elltg~~P~ 511 (623)
......... ......+||+.|+|||++.+. .++.++||||+||++|||++|+.||
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~~Pf 247 (361)
T 4f9c_A 168 THDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPF 247 (361)
T ss_dssp CTTCSCGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTCSSS
T ss_pred cCCccccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHCCCCC
Confidence 543221110 112234699999999999775 5899999999999999999999999
Q ss_pred CCCC
Q 006982 512 NVAK 515 (623)
Q Consensus 512 ~~~~ 515 (623)
....
T Consensus 248 ~~~~ 251 (361)
T 4f9c_A 248 YKAS 251 (361)
T ss_dssp SCCS
T ss_pred CCCC
Confidence 6543
No 20
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=100.00 E-value=1.1e-41 Score=375.03 Aligned_cols=197 Identities=23% Similarity=0.308 Sum_probs=171.8
Q ss_pred ccCcccceeeccCccEEEEEEeC-CCcEEEEEEecccc----ccHHHH---HHHHHHhCCCCCCCCcceeEEEEeCCeee
Q 006982 305 NSFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQ----RSEKEF---VAEMATLGSVKNRNLVPLLGFCMAKKERL 376 (623)
Q Consensus 305 ~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~---~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 376 (623)
++|...++||+|+||.||+|+.+ +|+.||+|++.+.. ...... ..++.++..++|||||++++++++.+..|
T Consensus 189 ddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~ly 268 (689)
T 3v5w_A 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLS 268 (689)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEEE
T ss_pred HHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCEEE
Confidence 57999999999999999999965 68999999996532 222333 34467788999999999999999999999
Q ss_pred EEEecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccc
Q 006982 377 LVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARL 456 (623)
Q Consensus 377 lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~ 456 (623)
+||||++||+|.++|.. ...+++..+..++.||+.||+|||++ +|+||||||+||||+.+|++||+|||+|+.
T Consensus 269 lVmEy~~GGdL~~~l~~----~~~l~E~~a~~y~~qIl~aL~yLH~~---gIiHRDLKPeNILld~~G~vKL~DFGlA~~ 341 (689)
T 3v5w_A 269 FILDLMNGGDLHYHLSQ----HGVFSEADMRFYAAEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLACD 341 (689)
T ss_dssp EEECCCCSCBHHHHHHH----HCCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECTTSCEEECCCTTCEE
T ss_pred EEEecCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCchHHeEEeCCCCEEecccceeee
Confidence 99999999999999963 24689999999999999999999999 999999999999999999999999999987
Q ss_pred cCCCCCcccccccCCCCcccccCcccccC-CCCCcchhHHHHHHHHHHHHhCCCCCCCC
Q 006982 457 MNPIDTHLSTFVNGEFGDLGYVAPEYART-LVATPKGDVYSFGTVLLELVTGERPTNVA 514 (623)
Q Consensus 457 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~k~DV~sfGvil~elltg~~P~~~~ 514 (623)
...... .+.+||+.|||||++.. ..|+.++||||+||++|||++|+.||...
T Consensus 342 ~~~~~~------~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~ 394 (689)
T 3v5w_A 342 FSKKKP------HASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQH 394 (689)
T ss_dssp CSSCCC------CSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGG
T ss_pred cCCCCC------CCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 654221 23469999999999964 57899999999999999999999999753
No 21
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=100.00 E-value=1.3e-41 Score=351.82 Aligned_cols=274 Identities=23% Similarity=0.280 Sum_probs=209.4
Q ss_pred hccCcccceeeccCccEEEEEEeCCCcEEEEEEeccccccHHHHHHHHHHhCCCCCCCCcceeEEEEeCC----eeeEEE
Q 006982 304 TNSFSKNNIIGSGRTGTMYKALLEDGTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGFCMAKK----ERLLVY 379 (623)
Q Consensus 304 ~~~f~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~----~~~lV~ 379 (623)
.++|...+.||+|+||.||+|+.. ++.||+|++.........+..|+.++.+++||||+++++++.... ..++||
T Consensus 23 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~lv~ 101 (322)
T 3soc_A 23 SMPLQLLEVKARGRFGCVWKAQLL-NEYVAVKIFPIQDKQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLIT 101 (322)
T ss_dssp TEEEEEEEEEECSTTCEEEEEEET-TEEEEEEEECGGGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEE
T ss_pred hhhchhhheecccCceEEEEEEEC-CCEEEEEEeecCchHHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEEEEE
Confidence 357888999999999999999986 789999999876666667778999999999999999999998754 368999
Q ss_pred ecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhc-------CCCCcEecCCCCCceeeCCCCCeEEeecc
Q 006982 380 KHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHN-------CNPRIIHRNISSKCILLDDDFEPKISDFG 452 (623)
Q Consensus 380 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~-------~~~~i~H~dlk~~NILl~~~~~~kl~Dfg 452 (623)
||+++|+|.++++. ..++|..++.++.|++.||+|||+. +.++|+||||||+|||++.++.+||+|||
T Consensus 102 e~~~~g~L~~~l~~-----~~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~kL~DFg 176 (322)
T 3soc_A 102 AFHEKGSLSDFLKA-----NVVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFG 176 (322)
T ss_dssp ECCTTCBHHHHHHH-----CCBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGGEEECTTCCEEECCCT
T ss_pred ecCCCCCHHHHHHh-----cCCCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHhEEECCCCeEEEccCC
Confidence 99999999999953 3489999999999999999999986 23479999999999999999999999999
Q ss_pred cccccCCCCCcccccccCCCCcccccCcccccC-----CCCCcchhHHHHHHHHHHHHhCCCCCCCCCCcccccc-----
Q 006982 453 LARLMNPIDTHLSTFVNGEFGDLGYVAPEYART-----LVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKG----- 522 (623)
Q Consensus 453 la~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~s~k~DV~sfGvil~elltg~~P~~~~~~~~~~~~----- 522 (623)
+++........ .......||+.|+|||++.+ ..++.++|||||||++|||+||+.||...........
T Consensus 177 ~a~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~ 254 (322)
T 3soc_A 177 LALKFEAGKSA--GDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIG 254 (322)
T ss_dssp TCEEECTTSCC--CCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHHHHC
T ss_pred cccccccccCc--cccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhhhhc
Confidence 99876543221 11223458999999999876 3556789999999999999999999976543221110
Q ss_pred ---cHHHHHHHHhccCchhhhhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHhhccc
Q 006982 523 ---NLVEWIAQLSSTGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAIGERY 590 (623)
Q Consensus 523 ---~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~L~~i~~~~ 590 (623)
....+...... ......+...+. .......+.+++..|+. .||++|||+.||++.|+++.+..
T Consensus 255 ~~~~~~~~~~~~~~-~~~~~~~~~~~~---~~~~~~~l~~li~~cl~-~dP~~Rps~~ell~~L~~l~~~~ 320 (322)
T 3soc_A 255 QHPSLEDMQEVVVH-KKKRPVLRDYWQ---KHAGMAMLCETIEECWD-HDAEARLSAGCVGERITQMQRLT 320 (322)
T ss_dssp SSCCHHHHHHHHTT-SCCCCCCCGGGG---SSHHHHHHHHHHHHHTC-SSGGGSCCHHHHHHHHHHHHHHC
T ss_pred cCCchhhhhhhhhc-ccCCCCcccccc---ccchHHHHHHHHHHHcc-CChhhCcCHHHHHHHHHHHHHHh
Confidence 11111111111 111111111111 12334456677778887 99999999999999999987643
No 22
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=100.00 E-value=1.4e-40 Score=341.41 Aligned_cols=284 Identities=35% Similarity=0.575 Sum_probs=227.2
Q ss_pred cccccCHHHHHHHhccCccc------ceeeccCccEEEEEEeCCCcEEEEEEeccc-----cccHHHHHHHHHHhCCCCC
Q 006982 291 SITKMRLSDLMKATNSFSKN------NIIGSGRTGTMYKALLEDGTSLMVKRLQDS-----QRSEKEFVAEMATLGSVKN 359 (623)
Q Consensus 291 ~~~~~~~~~l~~~~~~f~~~------~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~-----~~~~~~~~~e~~~l~~l~h 359 (623)
....+++.++..+++.|... +.||+|+||.||+|.. +++.||+|++... ....+.+.+|++++.+++|
T Consensus 11 ~~~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h 89 (307)
T 2nru_A 11 RFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQH 89 (307)
T ss_dssp CCEECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES-SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCC
T ss_pred CCCcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEE-CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCC
Confidence 34578899999999999888 8999999999999997 5889999998643 2235678999999999999
Q ss_pred CCCcceeEEEEeCCeeeEEEecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCcee
Q 006982 360 RNLVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCIL 439 (623)
Q Consensus 360 ~niv~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NIL 439 (623)
|||+++++++.+.+..++||||+++|+|.+++.... ....++|..++.++.|++.||+|||+. +|+||||||+||+
T Consensus 90 ~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dlkp~Nil 165 (307)
T 2nru_A 90 ENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLD-GTPPLSWHMRCKIAQGAANGINFLHEN---HHIHRDIKSANIL 165 (307)
T ss_dssp TTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTGG-GCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEE
T ss_pred CCeEEEEEEEecCCceEEEEEecCCCcHHHHHHhcc-CCCCCCHHHHHHHHHHHHHHHHHHhcC---CeecCCCCHHHEE
Confidence 999999999999999999999999999999986432 235689999999999999999999999 9999999999999
Q ss_pred eCCCCCeEEeecccccccCCCCCcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCccc
Q 006982 440 LDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPET 519 (623)
Q Consensus 440 l~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~~~~~~~ 519 (623)
+++++.+||+|||+++........ .......||+.|+|||.+.+ .++.++||||||+++|||++|+.||.......
T Consensus 166 i~~~~~~kl~Dfg~~~~~~~~~~~--~~~~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~- 241 (307)
T 2nru_A 166 LDEAFTAKISDFGLARASEKFAQT--VMTSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHREPQ- 241 (307)
T ss_dssp ECTTCCEEECCCTTCEECCSCSSC--EECSSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHHHHCCCSBCTTBSSS-
T ss_pred EcCCCcEEEeeccccccccccccc--ccccccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHHHHCCCCcccCcchH-
Confidence 999999999999999876532211 11223458999999998865 57899999999999999999999997644322
Q ss_pred ccccHHHHHHHHhc-cCchhhhhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHhhc
Q 006982 520 FKGNLVEWIAQLSS-TGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAIGE 588 (623)
Q Consensus 520 ~~~~l~~~~~~~~~-~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~L~~i~~ 588 (623)
.+..+...... ...+.+.+++.+.. ........+.+++..|+. .+|++|||+.+|++.|+++..
T Consensus 242 ---~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~li~~cl~-~~p~~Rps~~~l~~~L~~l~~ 306 (307)
T 2nru_A 242 ---LLLDIKEEIEDEEKTIEDYIDKKMND-ADSTSVEAMYSVASQCLH-EKKNKRPDIKKVQQLLQEMTA 306 (307)
T ss_dssp ---BTTHHHHHHHTTSCCHHHHSCSSCSC-CCHHHHHHHHHHHHHHTC-SSTTTSCCHHHHHHHHHHHC-
T ss_pred ---HHHHHHHHhhhhhhhhhhhccccccc-cchHHHHHHHHHHHHHcC-CCcccCcCHHHHHHHHHHHhc
Confidence 12222222211 22344555544422 244555667778888887 999999999999999998864
No 23
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=1.9e-41 Score=340.96 Aligned_cols=257 Identities=23% Similarity=0.383 Sum_probs=209.5
Q ss_pred ccCcccceeeccCccEEEEEEeCCCcEEEEEEeccccccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEEecCCC
Q 006982 305 NSFSKNNIIGSGRTGTMYKALLEDGTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKHMPN 384 (623)
Q Consensus 305 ~~f~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~ 384 (623)
++|...+.||+|+||.||+|...++..||+|++.......+.+.+|++++.+++||||+++++++.+....++||||+++
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~ 89 (269)
T 4hcu_A 10 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEH 89 (269)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTEEEEEEEECTTSBCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECCTT
T ss_pred hhceeeheecCCCccEEEEEEecCCCeEEEEEecccccCHHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEEEeCCC
Confidence 56888899999999999999998899999999988777778899999999999999999999999999999999999999
Q ss_pred CCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCCCCCcc
Q 006982 385 GSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHL 464 (623)
Q Consensus 385 gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~~~~~~ 464 (623)
|+|.+++... ...+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++......
T Consensus 90 ~~L~~~l~~~---~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~--- 160 (269)
T 4hcu_A 90 GCLSDYLRTQ---RGLFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQ--- 160 (269)
T ss_dssp CBHHHHHHTT---TTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECGGGCEEECCTTGGGGBCCHH---
T ss_pred CcHHHHHHhc---CcccCHHHHHHHHHHHHHHHHHHHhC---CeecCCcchheEEEcCCCCEEeccccccccccccc---
Confidence 9999999643 24689999999999999999999999 99999999999999999999999999998764321
Q ss_pred cccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCcccccccHHHHHHHHhccCchhhhhch
Q 006982 465 STFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVT-GERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAIDK 543 (623)
Q Consensus 465 ~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~ellt-g~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~ 543 (623)
.....+..+|+.|+|||.+.+..++.++||||+|+++|||++ |+.||..... .+.......... .
T Consensus 161 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~--------~~~~~~~~~~~~------~ 226 (269)
T 4hcu_A 161 YTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSN--------SEVVEDISTGFR------L 226 (269)
T ss_dssp HHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCH--------HHHHHHHHTTCC------C
T ss_pred cccccCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCH--------HHHHHHHhcCcc------C
Confidence 112233446788999999998899999999999999999999 9999865322 111111111100 0
Q ss_pred hhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHhhcc
Q 006982 544 CLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAIGER 589 (623)
Q Consensus 544 ~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~L~~i~~~ 589 (623)
......+++ +.+++..|+. .+|++||+++|+++.|+++.++
T Consensus 227 -~~~~~~~~~---~~~li~~~l~-~~p~~Rps~~~ll~~l~~l~~~ 267 (269)
T 4hcu_A 227 -YKPRLASTH---VYQIMNHCWR-ERPEDRPAFSRLLRQLAEIAES 267 (269)
T ss_dssp -CCCTTSCHH---HHHHHHHHTC-SSGGGSCCHHHHHHHHHHHHHC
T ss_pred -CCCCcCCHH---HHHHHHHHcc-CCcccCcCHHHHHHHHHHHHHc
Confidence 001112333 3444556776 9999999999999999998764
No 24
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=100.00 E-value=3.4e-41 Score=346.50 Aligned_cols=262 Identities=22% Similarity=0.377 Sum_probs=207.9
Q ss_pred ccCcccceeeccCccEEEEEEeC-CCcEEEEEEeccc-cccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEEecC
Q 006982 305 NSFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDS-QRSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKHM 382 (623)
Q Consensus 305 ~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~ 382 (623)
++|...+.||+|+||.||+|... ++..||+|++... ....+.+.+|++++.+++||||+++++++.+.+..++||||+
T Consensus 10 ~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~ 89 (310)
T 3s95_A 10 SDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYI 89 (310)
T ss_dssp GGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred hHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEEEec
Confidence 56888999999999999999965 6899999988653 345677999999999999999999999999999999999999
Q ss_pred CCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCCCCC
Q 006982 383 PNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDT 462 (623)
Q Consensus 383 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~~~~ 462 (623)
++|+|.+++... ...++|..++.++.|++.||+|||+. +|+||||||+||++++++.+||+|||+++.......
T Consensus 90 ~~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 163 (310)
T 3s95_A 90 KGGTLRGIIKSM---DSQYPWSQRVSFAKDIASGMAYLHSM---NIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKT 163 (310)
T ss_dssp TTCBHHHHHHHC---CTTSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEECTTSCEEECCCTTCEECC----
T ss_pred CCCcHHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCcCeEEECCCCCEEEeecccceecccccc
Confidence 999999999643 35689999999999999999999999 999999999999999999999999999987644322
Q ss_pred cccc----------cccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCcccc-cccHHHHHHHH
Q 006982 463 HLST----------FVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETF-KGNLVEWIAQL 531 (623)
Q Consensus 463 ~~~~----------~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~~~~~~~~-~~~l~~~~~~~ 531 (623)
.... ......||+.|+|||++.+..++.++||||||+++|||++|..|+......... ...........
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (310)
T 3s95_A 164 QPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLNVRGFLDRY 243 (310)
T ss_dssp ----------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTSSBCHHHHHHHT
T ss_pred cccccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHHhhhhhcccccc
Confidence 1110 011345899999999999999999999999999999999999998754332221 11122221111
Q ss_pred hccCchhhhhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHhhccc
Q 006982 532 SSTGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAIGERY 590 (623)
Q Consensus 532 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~L~~i~~~~ 590 (623)
.. ...+++ +..++..|+. .||++|||+.|+++.|++++...
T Consensus 244 -------------~~-~~~~~~---l~~li~~~l~-~dP~~Rps~~~l~~~L~~l~~~~ 284 (310)
T 3s95_A 244 -------------CP-PNCPPS---FFPITVRCCD-LDPEKRPSFVKLEHWLETLRMHL 284 (310)
T ss_dssp -------------CC-TTCCTT---HHHHHHHHTC-SSGGGSCCHHHHHHHHHHHHHHH
T ss_pred -------------CC-CCCCHH---HHHHHHHHcc-CChhhCcCHHHHHHHHHHHHHhc
Confidence 11 112222 3445556776 99999999999999999997654
No 25
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=100.00 E-value=3.1e-41 Score=373.55 Aligned_cols=250 Identities=19% Similarity=0.329 Sum_probs=199.8
Q ss_pred ccCcccceeeccCccEEEEEEeC-CCcEEEEEEecccc-ccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEEecC
Q 006982 305 NSFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQ-RSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKHM 382 (623)
Q Consensus 305 ~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~ 382 (623)
++|...+.||+|+||.||+|..+ +|+.||+|++.... ...+.+.+|+++|++++|||||++++++.+....++||||+
T Consensus 157 ~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~E~~ 236 (573)
T 3uto_A 157 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFM 236 (573)
T ss_dssp GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEEEECC
T ss_pred cccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeec
Confidence 57899999999999999999964 68999999986543 34567889999999999999999999999999999999999
Q ss_pred CCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCC--CCeEEeecccccccCCC
Q 006982 383 PNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDD--FEPKISDFGLARLMNPI 460 (623)
Q Consensus 383 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~--~~~kl~Dfgla~~~~~~ 460 (623)
++|+|.+++... ...+++..+..++.||+.||.|||++ +|+||||||+|||++.+ +.+||+|||+++.+...
T Consensus 237 ~gg~L~~~i~~~---~~~l~e~~~~~~~~qi~~al~ylH~~---~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~~ 310 (573)
T 3uto_A 237 SGGELFEKVADE---HNKMSEDEAVEYMRQVCKGLCHMHEN---NYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPK 310 (573)
T ss_dssp CCCBHHHHHTCT---TSCEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSCCCEEECCCSSCEECCTT
T ss_pred CCCcHHHHHHHh---CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCChhhccccCCCCCCEEEeeccceeEccCC
Confidence 999999998532 24689999999999999999999999 99999999999999854 89999999999987653
Q ss_pred CCcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCcccccccHHHHHHHHhccCchhhh
Q 006982 461 DTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDA 540 (623)
Q Consensus 461 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 540 (623)
... ....||+.|||||++.+..|+.++||||+||++|||++|+.||...... +.......... .+
T Consensus 311 ~~~-----~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~~--------~~~~~i~~~~~--~~ 375 (573)
T 3uto_A 311 QSV-----KVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDD--------ETLRNVKSCDW--NM 375 (573)
T ss_dssp SEE-----EEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHH--------HHHHHHHTTCC--CC
T ss_pred Cce-----eeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHH--------HHHHHHHhCCC--CC
Confidence 221 2235999999999999999999999999999999999999999753321 11111111100 00
Q ss_pred hchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHH
Q 006982 541 IDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQ 581 (623)
Q Consensus 541 ~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~ 581 (623)
-+.. ....+++...+ +..|+. .||++|||+.|+++
T Consensus 376 ~~~~--~~~~s~~~~dl---i~~~L~-~dp~~R~t~~e~l~ 410 (573)
T 3uto_A 376 DDSA--FSGISEDGKDF---IRKLLL-ADPNTRMTIHQALE 410 (573)
T ss_dssp CSGG--GTTSCHHHHHH---HHTTSC-SSGGGSCCHHHHHH
T ss_pred Cccc--ccCCCHHHHHH---HHHHcc-CChhHCcCHHHHhc
Confidence 0111 11233444444 345665 99999999999876
No 26
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=100.00 E-value=3.3e-41 Score=349.18 Aligned_cols=260 Identities=23% Similarity=0.383 Sum_probs=203.9
Q ss_pred ccCcccceeeccCccEEEEEEeC----CCcEEEEEEecccc--ccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEE
Q 006982 305 NSFSKNNIIGSGRTGTMYKALLE----DGTSLMVKRLQDSQ--RSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLV 378 (623)
Q Consensus 305 ~~f~~~~~lG~G~~g~Vy~~~~~----~~~~vavK~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV 378 (623)
++|...+.||+|+||.||+|... .+..||+|++.... ...+.+.+|++++.+++||||+++++++.+.+..++|
T Consensus 49 ~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 128 (325)
T 3kul_A 49 SRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIV 128 (325)
T ss_dssp GGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGCCEEE
T ss_pred hHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCccEEE
Confidence 56888899999999999999974 45569999997642 3456799999999999999999999999999999999
Q ss_pred EecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccC
Q 006982 379 YKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMN 458 (623)
Q Consensus 379 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~ 458 (623)
|||+++|+|.+++... ...+++..++.++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++...
T Consensus 129 ~e~~~~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 202 (325)
T 3kul_A 129 TEYMENGSLDTFLRTH---DGQFTIMQLVGMLRGVGAGMRYLSDL---GYVHRDLAARNVLVDSNLVCKVSDFGLSRVLE 202 (325)
T ss_dssp EECCTTCBHHHHHHTT---TTCSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCSSCEECC
T ss_pred eeCCCCCcHHHHHHhc---ccCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCcceEEECCCCCEEECCCCcccccc
Confidence 9999999999999643 24689999999999999999999999 99999999999999999999999999998765
Q ss_pred CCCCcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCcccccccHHHHHHHHhccCch
Q 006982 459 PIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVT-GERPTNVAKAPETFKGNLVEWIAQLSSTGQL 537 (623)
Q Consensus 459 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~ellt-g~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~ 537 (623)
...... .......+|+.|+|||++.+..++.++||||||+++|||++ |+.||...... +...........
T Consensus 203 ~~~~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~--------~~~~~~~~~~~~ 273 (325)
T 3kul_A 203 DDPDAA-YTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNR--------DVISSVEEGYRL 273 (325)
T ss_dssp ----CC-EECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCHH--------HHHHHHHTTCCC
T ss_pred cCccce-eeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCHH--------HHHHHHHcCCCC
Confidence 432221 11223346788999999998899999999999999999999 99999653221 111111111000
Q ss_pred hhhhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHhhccc
Q 006982 538 QDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAIGERY 590 (623)
Q Consensus 538 ~~~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~L~~i~~~~ 590 (623)
. .....+++ +.+++..|+. .||++|||+.||++.|+.+.+..
T Consensus 274 ------~-~~~~~~~~---l~~li~~~l~-~dp~~Rps~~eil~~L~~l~~~~ 315 (325)
T 3kul_A 274 ------P-APMGCPHA---LHQLMLDCWH-KDRAQRPRFSQIVSVLDALIRSP 315 (325)
T ss_dssp ------C-CCTTCCHH---HHHHHHHHTC-SSGGGSCCHHHHHHHHHHHHHSC
T ss_pred ------C-CCCCcCHH---HHHHHHHHcc-CChhhCcCHHHHHHHHHHHHhCc
Confidence 0 01112333 4445567776 99999999999999999987644
No 27
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=100.00 E-value=6.4e-41 Score=342.59 Aligned_cols=266 Identities=23% Similarity=0.311 Sum_probs=197.3
Q ss_pred hccCcccceeeccCccEEEEEEeCCCcEEEEEEeccccccHHHHHHHHHHhCCCCCCCCcceeEEEEeC----CeeeEEE
Q 006982 304 TNSFSKNNIIGSGRTGTMYKALLEDGTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGFCMAK----KERLLVY 379 (623)
Q Consensus 304 ~~~f~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~----~~~~lV~ 379 (623)
.++|...+.||+|+||.||+|+. +++.||+|++..........+.|+....+++||||+++++++... ...++||
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~~lv~ 85 (301)
T 3q4u_A 7 ARDITLLECVGKGRYGEVWRGSW-QGENVAVKIFSSRDEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLWLIT 85 (301)
T ss_dssp GGGCEEEEEEEECSSEEEEEEEE-TTEEEEEEEECGGGHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEEEEEE
T ss_pred cCcEEEEEeeccCCCcEEEEEEE-CCEEEEEEEeccccchhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCceeEEeh
Confidence 46788999999999999999998 689999999976543222233344445558999999999997653 4578999
Q ss_pred ecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHH--------hcCCCCcEecCCCCCceeeCCCCCeEEeec
Q 006982 380 KHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLH--------HNCNPRIIHRNISSKCILLDDDFEPKISDF 451 (623)
Q Consensus 380 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH--------~~~~~~i~H~dlk~~NILl~~~~~~kl~Df 451 (623)
||+++|+|.++++ ...+++..+++++.|++.||+||| +. +|+||||||+|||++.++.+||+||
T Consensus 86 e~~~~g~L~~~l~-----~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~Nill~~~~~~kl~Df 157 (301)
T 3q4u_A 86 HYHEMGSLYDYLQ-----LTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKP---AIAHRDLKSKNILVKKNGQCCIADL 157 (301)
T ss_dssp CCCTTCBHHHHHT-----TCCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBC---EEECSCCCGGGEEECTTSCEEECCC
T ss_pred hhccCCCHHHHHh-----hcccCHHHHHHHHHHHHHHHHHHHHhhhhccCCC---CeecCCCChHhEEEcCCCCEEEeeC
Confidence 9999999999994 246899999999999999999999 66 9999999999999999999999999
Q ss_pred ccccccCCCCCcccccccCCCCcccccCcccccCC------CCCcchhHHHHHHHHHHHHhC----------CCCCCCCC
Q 006982 452 GLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTL------VATPKGDVYSFGTVLLELVTG----------ERPTNVAK 515 (623)
Q Consensus 452 gla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~------~~s~k~DV~sfGvil~elltg----------~~P~~~~~ 515 (623)
|+++.................||+.|+|||++.+. .++.++||||||+++|||++| +.||....
T Consensus 158 g~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~~~~ 237 (301)
T 3q4u_A 158 GLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVV 237 (301)
T ss_dssp TTCEEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTS
T ss_pred CCeeecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCccccccccccccccC
Confidence 99987654333222222334689999999999876 455799999999999999999 77776433
Q ss_pred CcccccccHHHHHHHHhccCchhhhhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHh
Q 006982 516 APETFKGNLVEWIAQLSSTGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAI 586 (623)
Q Consensus 516 ~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~L~~i 586 (623)
.... .................+ .... ........+.+++..|+. .||++|||+.||++.|+++
T Consensus 238 ~~~~---~~~~~~~~~~~~~~~~~~-~~~~---~~~~~~~~l~~li~~cl~-~dP~~Rps~~~i~~~L~~i 300 (301)
T 3q4u_A 238 PNDP---SFEDMRKVVCVDQQRPNI-PNRW---FSDPTLTSLAKLMKECWY-QNPSARLTALRIKKTLTKI 300 (301)
T ss_dssp CSSC---CHHHHHHHHTTSCCCCCC-CGGG---GGSHHHHHHHHHHHHHCC-SSGGGSCCHHHHHHHHHHH
T ss_pred CCCc---chhhhhHHHhccCCCCCC-Chhh---ccCccHHHHHHHHHHHhh-cChhhCCCHHHHHHHHhcc
Confidence 2211 111111111111110000 0000 012234456677778887 9999999999999999986
No 28
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=100.00 E-value=4.4e-41 Score=354.48 Aligned_cols=260 Identities=25% Similarity=0.408 Sum_probs=205.3
Q ss_pred ccCcccceeeccCccEEEEEEe--------CCCcEEEEEEecccc--ccHHHHHHHHHHhCCC-CCCCCcceeEEEEeCC
Q 006982 305 NSFSKNNIIGSGRTGTMYKALL--------EDGTSLMVKRLQDSQ--RSEKEFVAEMATLGSV-KNRNLVPLLGFCMAKK 373 (623)
Q Consensus 305 ~~f~~~~~lG~G~~g~Vy~~~~--------~~~~~vavK~~~~~~--~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~ 373 (623)
++|...+.||+|+||.||+|.. .++..||+|+++... ...+.+.+|++++.++ +||||+++++++.+.+
T Consensus 81 ~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~ 160 (370)
T 2psq_A 81 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDG 160 (370)
T ss_dssp GGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECSSS
T ss_pred HHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEccCC
Confidence 5788889999999999999985 245679999997643 3346789999999999 8999999999999999
Q ss_pred eeeEEEecCCCCCHhhhccCCCC------------CCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeC
Q 006982 374 ERLLVYKHMPNGSLYDLLHPADD------------TGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLD 441 (623)
Q Consensus 374 ~~~lV~e~~~~gsL~~~l~~~~~------------~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~ 441 (623)
..++||||+++|+|.+++..... ....+++..++.++.|++.||+|||+. +|+||||||+|||++
T Consensus 161 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~ 237 (370)
T 2psq_A 161 PLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVT 237 (370)
T ss_dssp SCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEC
T ss_pred CEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CeeccccchhhEEEC
Confidence 99999999999999999975432 124589999999999999999999999 999999999999999
Q ss_pred CCCCeEEeecccccccCCCCCcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCcccc
Q 006982 442 DDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVT-GERPTNVAKAPETF 520 (623)
Q Consensus 442 ~~~~~kl~Dfgla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~ellt-g~~P~~~~~~~~~~ 520 (623)
.++.+||+|||+++.......... .....+|+.|+|||++.+..++.++|||||||++|||++ |+.||......
T Consensus 238 ~~~~~kl~DFG~a~~~~~~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~~~--- 312 (370)
T 2psq_A 238 ENNVMKIADFGLARDINNIDYYKK--TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVE--- 312 (370)
T ss_dssp TTCCEEECCCSSCEETTCCCTTCT--TTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGG---
T ss_pred CCCCEEEccccCCcccCcccceec--ccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCCHH---
Confidence 999999999999987654322111 122346889999999999999999999999999999999 99999753221
Q ss_pred cccHHHHHHHHhccCchhhhhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHhhc
Q 006982 521 KGNLVEWIAQLSSTGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAIGE 588 (623)
Q Consensus 521 ~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~L~~i~~ 588 (623)
.+...+..... .. ......++ +.+++..|+. .||++||++.|+++.|+++..
T Consensus 313 --~~~~~~~~~~~----~~------~~~~~~~~---l~~li~~~l~-~dP~~Rpt~~ell~~L~~il~ 364 (370)
T 2psq_A 313 --ELFKLLKEGHR----MD------KPANCTNE---LYMMMRDCWH-AVPSQRPTFKQLVEDLDRILT 364 (370)
T ss_dssp --GHHHHHHTTCC----CC------CCTTSCHH---HHHHHHHHTC-SSGGGSCCHHHHHHHHHHHHH
T ss_pred --HHHHHHhcCCC----CC------CCCCCCHH---HHHHHHHHcC-CChhhCcCHHHHHHHHHHHHH
Confidence 11111111100 00 01112333 4445556777 999999999999999999764
No 29
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=100.00 E-value=2.9e-41 Score=339.38 Aligned_cols=259 Identities=23% Similarity=0.402 Sum_probs=209.8
Q ss_pred hccCcccceeeccCccEEEEEEeCCCcEEEEEEeccccccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEEecCC
Q 006982 304 TNSFSKNNIIGSGRTGTMYKALLEDGTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKHMP 383 (623)
Q Consensus 304 ~~~f~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~ 383 (623)
.++|...+.||+|+||.||+|...++..||+|++.......+.+.+|++++.+++||||+++++++.+....++||||++
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 86 (268)
T 3sxs_A 7 REEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSMSEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYIS 86 (268)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECBTTBCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEECCT
T ss_pred hhheeeeeeeccCCCceEEEEEecCceeEEEEEeccCCCcHHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEEEccC
Confidence 35788899999999999999999988899999998877777889999999999999999999999999999999999999
Q ss_pred CCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCCCCCc
Q 006982 384 NGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTH 463 (623)
Q Consensus 384 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~~~~~ 463 (623)
+|+|.+++... +..+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.......
T Consensus 87 ~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~- 159 (268)
T 3sxs_A 87 NGCLLNYLRSH---GKGLEPSQLLEMCYDVCEGMAFLESH---QFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQY- 159 (268)
T ss_dssp TCBHHHHHHHH---GGGCCHHHHHHHHHHHHHHHHHHHHT---TEEESSCSGGGEEECTTCCEEECCTTCEEECCTTCE-
T ss_pred CCcHHHHHHHc---CCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCcCcceEEECCCCCEEEccCccceecchhhh-
Confidence 99999999642 24689999999999999999999999 999999999999999999999999999987654322
Q ss_pred ccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCcccccccHHHHHHHHhccCchhhhhc
Q 006982 464 LSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVT-GERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAID 542 (623)
Q Consensus 464 ~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~ellt-g~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d 542 (623)
....+..+|+.|+|||.+.+..++.++||||||+++|||++ |+.||...... ...........
T Consensus 160 --~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~--------~~~~~~~~~~~------ 223 (268)
T 3sxs_A 160 --VSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNS--------EVVLKVSQGHR------ 223 (268)
T ss_dssp --EECCSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHH--------HHHHHHHTTCC------
T ss_pred --hcccCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccChH--------HHHHHHHcCCC------
Confidence 11233446788999999998889999999999999999999 99998643221 11111111100
Q ss_pred hhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHhhccc
Q 006982 543 KCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAIGERY 590 (623)
Q Consensus 543 ~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~L~~i~~~~ 590 (623)
.......+++ +.+++..|+. .+|++|||+.|+++.|+.++++.
T Consensus 224 -~~~~~~~~~~---l~~li~~~l~-~~p~~Rps~~~ll~~L~~l~~~~ 266 (268)
T 3sxs_A 224 -LYRPHLASDT---IYQIMYSCWH-ELPEKRPTFQQLLSSIEPLREKD 266 (268)
T ss_dssp -CCCCTTSCHH---HHHHHHHTTC-SSGGGSCCHHHHHHHHGGGCC--
T ss_pred -CCCCCcChHH---HHHHHHHHcC-CChhhCcCHHHHHHHHHHhhhcc
Confidence 0001112333 4445556776 99999999999999999997653
No 30
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=100.00 E-value=3.5e-41 Score=355.51 Aligned_cols=260 Identities=22% Similarity=0.354 Sum_probs=194.5
Q ss_pred ccCcccceeeccCccEEEEEEeC----CCcEEEEEEecccc--ccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEE
Q 006982 305 NSFSKNNIIGSGRTGTMYKALLE----DGTSLMVKRLQDSQ--RSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLV 378 (623)
Q Consensus 305 ~~f~~~~~lG~G~~g~Vy~~~~~----~~~~vavK~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV 378 (623)
++|...+.||+|+||.||+|+.. ++..||+|+++... ...+.+.+|++++.+++||||+++++++.+.+..++|
T Consensus 45 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 124 (373)
T 2qol_A 45 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIV 124 (373)
T ss_dssp GGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEEE
T ss_pred hhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCceEEE
Confidence 57888999999999999999864 57789999997542 3456799999999999999999999999999999999
Q ss_pred EecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccC
Q 006982 379 YKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMN 458 (623)
Q Consensus 379 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~ 458 (623)
|||+++|+|.++++.. +..+++..++.++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++...
T Consensus 125 ~e~~~~~sL~~~l~~~---~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 198 (373)
T 2qol_A 125 TEYMENGSLDSFLRKH---DAQFTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNILINSNLVCKVSDFGLGRVLE 198 (373)
T ss_dssp EECCTTCBHHHHHHTT---TTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCC-------
T ss_pred EeCCCCCcHHHHHHhC---CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCcceEEEcCCCCEEECcCccccccc
Confidence 9999999999999643 34689999999999999999999999 99999999999999999999999999998765
Q ss_pred CCCCcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCcccccccHHHHHHHHhccCch
Q 006982 459 PIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVT-GERPTNVAKAPETFKGNLVEWIAQLSSTGQL 537 (623)
Q Consensus 459 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~ellt-g~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~ 537 (623)
...... .......+++.|+|||++.+..++.++||||||+++|||++ |+.||..... .+......
T Consensus 199 ~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~--------~~~~~~i~----- 264 (373)
T 2qol_A 199 DDPEAA-YTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSN--------QDVIKAVD----- 264 (373)
T ss_dssp ----------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCH--------HHHHHHHH-----
T ss_pred cCCccc-eeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCH--------HHHHHHHH-----
Confidence 422111 11122235778999999999999999999999999999998 9999964321 11111111
Q ss_pred hhhhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHhhccc
Q 006982 538 QDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAIGERY 590 (623)
Q Consensus 538 ~~~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~L~~i~~~~ 590 (623)
..............+.+++..|+. .||++||++.||++.|+++....
T Consensus 265 -----~~~~~~~~~~~~~~l~~li~~cl~-~dp~~RPs~~~i~~~L~~~~~~~ 311 (373)
T 2qol_A 265 -----EGYRLPPPMDCPAALYQLMLDCWQ-KDRNNRPKFEQIVSILDKLIRNP 311 (373)
T ss_dssp -----TTEECCCCTTCBHHHHHHHHHHTC-SSGGGSCCHHHHHHHHHHHHHCG
T ss_pred -----cCCCCCCCccccHHHHHHHHHHhC-cChhhCcCHHHHHHHHHHHHhCc
Confidence 110000011112235556667877 99999999999999999986543
No 31
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=100.00 E-value=4.2e-41 Score=345.83 Aligned_cols=260 Identities=28% Similarity=0.464 Sum_probs=197.4
Q ss_pred hccCcccceeeccCccEEEEEEeCCCcEEEEEEecccc---ccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEEe
Q 006982 304 TNSFSKNNIIGSGRTGTMYKALLEDGTSLMVKRLQDSQ---RSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYK 380 (623)
Q Consensus 304 ~~~f~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e 380 (623)
.++|...+.||+|+||.||+|.. +++.||+|++.... ...+.+.+|++++.+++||||+++++++.+....++|||
T Consensus 36 ~~~y~i~~~lG~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 114 (309)
T 3p86_A 36 WCDLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTE 114 (309)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEE-TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTCCEEEEE
T ss_pred hhHceeeeEeecCCCeEEEEEEE-CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCceEEEEe
Confidence 46788899999999999999987 58899999987643 234578899999999999999999999999999999999
Q ss_pred cCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCC--cEecCCCCCceeeCCCCCeEEeecccccccC
Q 006982 381 HMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPR--IIHRNISSKCILLDDDFEPKISDFGLARLMN 458 (623)
Q Consensus 381 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~--i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~ 458 (623)
|+++|+|.+++.... ....+++..++.++.|++.||+|||+. + |+||||||+||+++.++.+||+|||+++...
T Consensus 115 ~~~~~~L~~~l~~~~-~~~~~~~~~~~~i~~qi~~aL~~LH~~---~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~ 190 (309)
T 3p86_A 115 YLSRGSLYRLLHKSG-AREQLDERRRLSMAYDVAKGMNYLHNR---NPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKA 190 (309)
T ss_dssp CCTTCBHHHHHHSTT-HHHHSCHHHHHHHHHHHHHHHHHHHTS---SSCCCCTTCCGGGEEECTTCCEEECCCC------
T ss_pred cCCCCcHHHHHhhcC-CCCCCCHHHHHHHHHHHHHHHHHHHcC---CCCEECCCCChhhEEEeCCCcEEECCCCCCcccc
Confidence 999999999996432 123489999999999999999999998 7 9999999999999999999999999998654
Q ss_pred CCCCcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCcccccccHHHHHHHHhccCchh
Q 006982 459 PIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQ 538 (623)
Q Consensus 459 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 538 (623)
.... ......||+.|+|||++.+..++.++||||||+++|||++|+.||...... +............
T Consensus 191 ~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~~--------~~~~~~~~~~~~~ 258 (309)
T 3p86_A 191 STFL----SSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPA--------QVVAAVGFKCKRL 258 (309)
T ss_dssp ---------------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCHH--------HHHHHHHHSCCCC
T ss_pred cccc----ccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH--------HHHHHHHhcCCCC
Confidence 3211 112345899999999999999999999999999999999999999753221 1111110000000
Q ss_pred hhhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHhhccc
Q 006982 539 DAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAIGERY 590 (623)
Q Consensus 539 ~~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~L~~i~~~~ 590 (623)
. .....+.++ ..++..|+. .||++|||++|+++.|+.+.+..
T Consensus 259 ~------~~~~~~~~l---~~li~~~l~-~dP~~Rps~~~ll~~L~~~~~~~ 300 (309)
T 3p86_A 259 E------IPRNLNPQV---AAIIEGCWT-NEPWKRPSFATIMDLLRPLIKSA 300 (309)
T ss_dssp C------CCTTSCHHH---HHHHHHHTC-SSGGGSCCHHHHHHHHHHHHC--
T ss_pred C------CCccCCHHH---HHHHHHHcc-CChhhCcCHHHHHHHHHHHHHhC
Confidence 0 011123333 344556776 99999999999999999987654
No 32
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=100.00 E-value=7.7e-41 Score=339.11 Aligned_cols=258 Identities=19% Similarity=0.327 Sum_probs=207.0
Q ss_pred hccCcccceeeccCccEEEEEEeCCCcEEEEEEeccccccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEEecCC
Q 006982 304 TNSFSKNNIIGSGRTGTMYKALLEDGTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKHMP 383 (623)
Q Consensus 304 ~~~f~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~ 383 (623)
.++|...+.||+|+||.||++...++..||+|++.......+.+.+|++++.+++||||+++++++.+.+..++||||++
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 102 (283)
T 3gen_A 23 PKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMA 102 (283)
T ss_dssp GGGEEEEEECC---CEEEEEEEETTTEEEEEEEECTTSBCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEECCCT
T ss_pred HHHHHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCCCCCHHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEEEeccC
Confidence 35788889999999999999999988899999998877777889999999999999999999999999999999999999
Q ss_pred CCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCCCCCc
Q 006982 384 NGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTH 463 (623)
Q Consensus 384 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~~~~~ 463 (623)
+|+|.+++... ...+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++......
T Consensus 103 ~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~-- 174 (283)
T 3gen_A 103 NGCLLNYLREM---RHRFQTQQLLEMCKDVCEAMEYLESK---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE-- 174 (283)
T ss_dssp TCBHHHHHHCG---GGCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCSGGGEEECTTSCEEECSTTGGGGBCCHH--
T ss_pred CCcHHHHHHHh---ccCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCccceEEEcCCCCEEEccccccccccccc--
Confidence 99999999642 24689999999999999999999999 99999999999999999999999999998764321
Q ss_pred ccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCcccccccHHHHHHHHhccCchhhhhc
Q 006982 464 LSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVT-GERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAID 542 (623)
Q Consensus 464 ~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~ellt-g~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d 542 (623)
........+|+.|+|||.+.+..++.++||||||+++|||++ |+.||...... .......... .
T Consensus 175 -~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~--------~~~~~~~~~~------~ 239 (283)
T 3gen_A 175 -YTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNS--------ETAEHIAQGL------R 239 (283)
T ss_dssp -HHSTTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHH--------HHHHHHHTTC------C
T ss_pred -cccccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccChh--------HHHHHHhccc------C
Confidence 111223446788999999998889999999999999999998 99999753221 1111111100 0
Q ss_pred hhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHhhcc
Q 006982 543 KCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAIGER 589 (623)
Q Consensus 543 ~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~L~~i~~~ 589 (623)
. ......+++ +.+++..|+. .+|++|||++|+++.|+++.++
T Consensus 240 ~-~~~~~~~~~---l~~li~~~l~-~~p~~Rps~~~ll~~L~~~~~~ 281 (283)
T 3gen_A 240 L-YRPHLASEK---VYTIMYSCWH-EKADERPTFKILLSNILDVMDE 281 (283)
T ss_dssp C-CCCTTCCHH---HHHHHHHTTC-SSGGGSCCHHHHHHHHHHHHHH
T ss_pred C-CCCCcCCHH---HHHHHHHHcc-CChhHCcCHHHHHHHHHHHhhc
Confidence 0 001112333 4455566777 9999999999999999998764
No 33
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=100.00 E-value=6.4e-41 Score=363.00 Aligned_cols=258 Identities=26% Similarity=0.421 Sum_probs=207.4
Q ss_pred hccCcccceeeccCccEEEEEEeCCCcEEEEEEeccccccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEEecCC
Q 006982 304 TNSFSKNNIIGSGRTGTMYKALLEDGTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKHMP 383 (623)
Q Consensus 304 ~~~f~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~ 383 (623)
.++|...+.||+|+||.||+|.+.++..||||+++......+.|.+|++++.+++||||+++++++. .+..++||||++
T Consensus 187 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~~~~lv~e~~~ 265 (454)
T 1qcf_A 187 RESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVT-KEPIYIITEFMA 265 (454)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEETTTEEEEEEEECTTSBCHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEECCCT
T ss_pred hHHeEEEEEcccCCceEEEEEEECCccEEEEEEecCCCccHHHHHHHHHHHhhCCCCCEeeEEEEEe-CCccEEEEeecC
Confidence 4568888999999999999999988999999999877777889999999999999999999999986 567899999999
Q ss_pred CCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCCCCCc
Q 006982 384 NGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTH 463 (623)
Q Consensus 384 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~~~~~ 463 (623)
+|+|.++++... ...+++..++.++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++......
T Consensus 266 ~g~L~~~l~~~~--~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~~-- 338 (454)
T 1qcf_A 266 KGSLLDFLKSDE--GSKQPLPKLIDFSAQIAEGMAFIEQR---NYIHRDLRAANILVSASLVCKIADFGLARVIEDNE-- 338 (454)
T ss_dssp TCBHHHHHHSHH--HHTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCSGGGEEECTTCCEEECSTTGGGGBCCHH--
T ss_pred CCcHHHHHHhcc--CCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCHHHEEECCCCcEEEeeCCCceEcCCCc--
Confidence 999999996432 23578999999999999999999999 99999999999999999999999999998764321
Q ss_pred ccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCcccccccHHHHHHHHhccCchhhhhc
Q 006982 464 LSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVT-GERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAID 542 (623)
Q Consensus 464 ~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~ellt-g~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d 542 (623)
.....+..+|+.|+|||++....++.++|||||||++|||+| |+.||...... .....+.. ....
T Consensus 339 -~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~~-----~~~~~i~~---~~~~----- 404 (454)
T 1qcf_A 339 -YTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNP-----EVIRALER---GYRM----- 404 (454)
T ss_dssp -HHTTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH-----HHHHHHHH---TCCC-----
T ss_pred -eeccCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCHH-----HHHHHHHc---CCCC-----
Confidence 111223346789999999998899999999999999999999 99999753221 11111111 1000
Q ss_pred hhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHhhcc
Q 006982 543 KCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAIGER 589 (623)
Q Consensus 543 ~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~L~~i~~~ 589 (623)
......+++ +.+++..|+. .||++|||+++|++.|+++...
T Consensus 405 --~~~~~~~~~---l~~li~~cl~-~dp~~RPt~~~i~~~L~~~~~~ 445 (454)
T 1qcf_A 405 --PRPENCPEE---LYNIMMRCWK-NRPEERPTFEYIQSVLDDFYTA 445 (454)
T ss_dssp --CCCTTSCHH---HHHHHHHHTC-SSGGGSCCHHHHHHHHHTSSSS
T ss_pred --CCCCCCCHH---HHHHHHHHcc-CChhHCcCHHHHHHHHHHHHhc
Confidence 001122333 4445567777 9999999999999999988654
No 34
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=100.00 E-value=2.1e-41 Score=357.94 Aligned_cols=260 Identities=24% Similarity=0.381 Sum_probs=205.2
Q ss_pred hccCcccceeeccCccEEEEEEeC-CCcEEEEEEecccc--ccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEEe
Q 006982 304 TNSFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQ--RSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYK 380 (623)
Q Consensus 304 ~~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e 380 (623)
.++|...+.||+|+||.||+|.+. +++.||+|.++... .....+.+|++++.+++||||+++++++.+.+..++|||
T Consensus 113 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e 192 (377)
T 3cbl_A 113 HEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVME 192 (377)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred hHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcEEEEE
Confidence 356888899999999999999976 78999999987542 233468899999999999999999999999999999999
Q ss_pred cCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCCC
Q 006982 381 HMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPI 460 (623)
Q Consensus 381 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~~ 460 (623)
|+++|+|.+++... +..+++..++.++.|++.||+|||+. +|+||||||+|||+++++.+||+|||+++.....
T Consensus 193 ~~~~g~L~~~l~~~---~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~~ 266 (377)
T 3cbl_A 193 LVQGGDFLTFLRTE---GARLRVKTLLQMVGDAAAGMEYLESK---CCIHRDLAARNCLVTEKNVLKISDFGMSREEADG 266 (377)
T ss_dssp CCTTCBHHHHHHHH---GGGCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCGGGCEECTTS
T ss_pred cCCCCCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHHC---CcCCcccCHHHEEEcCCCcEEECcCCCceecCCC
Confidence 99999999999632 24689999999999999999999999 9999999999999999999999999999865432
Q ss_pred CCcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCcccccccHHHHHHHHhccCchhh
Q 006982 461 DTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVT-GERPTNVAKAPETFKGNLVEWIAQLSSTGQLQD 539 (623)
Q Consensus 461 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~ellt-g~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 539 (623)
.. ........+++.|+|||.+....++.++|||||||++|||+| |..||...... ...+.+.. ....
T Consensus 267 ~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~~-----~~~~~~~~---~~~~-- 334 (377)
T 3cbl_A 267 VY--AASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQ-----QTREFVEK---GGRL-- 334 (377)
T ss_dssp EE--ECCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCHH-----HHHHHHHT---TCCC--
T ss_pred ce--eecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH-----HHHHHHHc---CCCC--
Confidence 11 111111225678999999998889999999999999999998 99998753211 11111111 1000
Q ss_pred hhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHhhccc
Q 006982 540 AIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAIGERY 590 (623)
Q Consensus 540 ~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~L~~i~~~~ 590 (623)
-.....++++. +++..|+. .||++|||++++++.|++++++.
T Consensus 335 -----~~~~~~~~~l~---~li~~cl~-~dP~~Rps~~~i~~~L~~i~~~~ 376 (377)
T 3cbl_A 335 -----PCPELCPDAVF---RLMEQCWA-YEPGQRPSFSTIYQELQSIRKRH 376 (377)
T ss_dssp -----CCCTTCCHHHH---HHHHHHTC-SSGGGSCCHHHHHHHHHHHHHHC
T ss_pred -----CCCCCCCHHHH---HHHHHHcC-CCchhCcCHHHHHHHHHHHHhhc
Confidence 00112334444 45556777 99999999999999999997654
No 35
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=100.00 E-value=1.4e-39 Score=336.42 Aligned_cols=259 Identities=22% Similarity=0.305 Sum_probs=206.0
Q ss_pred ccCHHHHHHHhcc----------CcccceeeccCccEEEEEEeC-CCcEEEEEEecccc-ccHHHHHHHHHHhCCCCCCC
Q 006982 294 KMRLSDLMKATNS----------FSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQ-RSEKEFVAEMATLGSVKNRN 361 (623)
Q Consensus 294 ~~~~~~l~~~~~~----------f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~e~~~l~~l~h~n 361 (623)
.++.+++..+++. |...+.||+|+||.||+|... +|+.||||++.... ...+.+.+|+.++++++|||
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n 103 (321)
T 2c30_A 24 VVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFN 103 (321)
T ss_dssp -CCHHHHHHHHHTTSCSSCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTCCCTT
T ss_pred cCcHHHHHHHHhhccCCCCchhhhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhCCCCC
Confidence 4677888777764 666779999999999999976 79999999986543 44677899999999999999
Q ss_pred CcceeEEEEeCCeeeEEEecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeC
Q 006982 362 LVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLD 441 (623)
Q Consensus 362 iv~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~ 441 (623)
|+++++++...+..++||||+++|+|.+++.. ..+++..+..++.|++.||.|||+. +|+||||||+||+++
T Consensus 104 iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-----~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~ 175 (321)
T 2c30_A 104 VVEMYKSYLVGEELWVLMEFLQGGALTDIVSQ-----VRLNEEQIATVCEAVLQALAYLHAQ---GVIHRDIKSDSILLT 175 (321)
T ss_dssp BCCEEEEEEETTEEEEEECCCCSCBHHHHHTT-----CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEC
T ss_pred cceEEEEEEECCEEEEEEecCCCCCHHHHHHh-----cCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEC
Confidence 99999999999999999999999999999852 4589999999999999999999999 999999999999999
Q ss_pred CCCCeEEeecccccccCCCCCcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCccccc
Q 006982 442 DDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFK 521 (623)
Q Consensus 442 ~~~~~kl~Dfgla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~~~~~~~~~ 521 (623)
.++.+||+|||++......... .....||+.|+|||++.+..++.++||||||+++|||++|+.||.....
T Consensus 176 ~~~~~kl~Dfg~~~~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~----- 246 (321)
T 2c30_A 176 LDGRVKLSDFGFCAQISKDVPK----RKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSP----- 246 (321)
T ss_dssp TTCCEEECCCTTCEECCSSSCC----BCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH-----
T ss_pred CCCcEEEeeeeeeeecccCccc----cccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH-----
Confidence 9999999999999876543221 1234589999999999999999999999999999999999999975321
Q ss_pred ccHHHHHHHHhccCchhhhhchhhh-cCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHH
Q 006982 522 GNLVEWIAQLSSTGQLQDAIDKCLV-AKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQF 582 (623)
Q Consensus 522 ~~l~~~~~~~~~~~~~~~~~d~~l~-~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~ 582 (623)
.......... ..+.+. ....++++.+ ++..|+. .||++|||+.|+++.
T Consensus 247 ---~~~~~~~~~~------~~~~~~~~~~~~~~l~~---li~~~l~-~dp~~Rps~~ell~h 295 (321)
T 2c30_A 247 ---VQAMKRLRDS------PPPKLKNSHKVSPVLRD---FLERMLV-RDPQERATAQELLDH 295 (321)
T ss_dssp ---HHHHHHHHHS------SCCCCTTGGGSCHHHHH---HHHHHSC-SSTTTSCCHHHHHTS
T ss_pred ---HHHHHHHhcC------CCCCcCccccCCHHHHH---HHHHHcc-CChhhCcCHHHHhcC
Confidence 1111111110 000000 0112333443 4446666 999999999999763
No 36
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=100.00 E-value=2.4e-40 Score=348.31 Aligned_cols=275 Identities=16% Similarity=0.234 Sum_probs=214.0
Q ss_pred hccCcccceeeccCccEEEEEEeCC------CcEEEEEEecccccc------------HHHHHHHHHHhCCCCCCCCcce
Q 006982 304 TNSFSKNNIIGSGRTGTMYKALLED------GTSLMVKRLQDSQRS------------EKEFVAEMATLGSVKNRNLVPL 365 (623)
Q Consensus 304 ~~~f~~~~~lG~G~~g~Vy~~~~~~------~~~vavK~~~~~~~~------------~~~~~~e~~~l~~l~h~niv~l 365 (623)
.++|...+.||+|+||.||+|.+.+ ++.||+|++...... ...+..|+..+..++||||+++
T Consensus 34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~ 113 (364)
T 3op5_A 34 AAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKY 113 (364)
T ss_dssp CCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCCE
T ss_pred CCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCeE
Confidence 4578899999999999999999764 478999998654311 1234456778889999999999
Q ss_pred eEEEEeC----CeeeEEEecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeC
Q 006982 366 LGFCMAK----KERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLD 441 (623)
Q Consensus 366 ~~~~~~~----~~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~ 441 (623)
++++... ...++||||+ +|+|.+++... ...+++..++.++.|++.||+|||+. +|+||||||+|||++
T Consensus 114 ~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~---~~~l~~~~~~~i~~qi~~~l~~lH~~---~iiHrDlkp~Nill~ 186 (364)
T 3op5_A 114 WGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEAN---AKRFSRKTVLQLSLRILDILEYIHEH---EYVHGDIKASNLLLN 186 (364)
T ss_dssp EEEEEEEETTEEEEEEEEECE-EEEHHHHHHHT---TSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEE
T ss_pred EeeeeeccCCcceEEEEEeCC-CCCHHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEEecCCHHHEEEe
Confidence 9998775 4478999999 99999999642 35699999999999999999999999 999999999999999
Q ss_pred --CCCCeEEeecccccccCCCCCccc---ccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCC
Q 006982 442 --DDFEPKISDFGLARLMNPIDTHLS---TFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKA 516 (623)
Q Consensus 442 --~~~~~kl~Dfgla~~~~~~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~~~~ 516 (623)
.++.+||+|||+++.+........ .......||+.|+|||++.+..++.++|||||||++|||+||+.||.....
T Consensus 187 ~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~~ 266 (364)
T 3op5_A 187 YKNPDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNLK 266 (364)
T ss_dssp SSCTTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTT
T ss_pred cCCCCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCcccccc
Confidence 899999999999987654322111 111233489999999999999999999999999999999999999975322
Q ss_pred cccccccHHHHHHHHhccCchhhhhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHhhcccCCCC
Q 006982 517 PETFKGNLVEWIAQLSSTGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAIGERYHFTT 594 (623)
Q Consensus 517 ~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~L~~i~~~~~~~~ 594 (623)
. ......... .....+.+++++|+.....++++..+++ .|+. .+|++||+++++++.|+++.++.....
T Consensus 267 ~----~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~---~cl~-~~p~~RP~~~~l~~~l~~~~~~~~~~~ 335 (364)
T 3op5_A 267 D----PKYVRDSKI-RYRENIASLMDKCFPAANAPGEIAKYME---TVKL-LDYTEKPLYENLRDILLQGLKAIGSKD 335 (364)
T ss_dssp C----HHHHHHHHH-HHHHCHHHHHHHHSCTTCCCHHHHHHHH---HHHT-CCTTCCCCHHHHHHHHHHHHHHTTCCC
T ss_pred C----HHHHHHHHH-HhhhhHHHHHHHhcccccCHHHHHHHHH---HHhc-CCCCCCCCHHHHHHHHHHHHHHcCCCc
Confidence 1 111111111 1223567778888765556666666655 5666 999999999999999999877765443
No 37
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=100.00 E-value=1.6e-40 Score=344.29 Aligned_cols=257 Identities=25% Similarity=0.441 Sum_probs=197.9
Q ss_pred ccCcccceeeccCccEEEEEEeC-CCc----EEEEEEeccc--cccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeE
Q 006982 305 NSFSKNNIIGSGRTGTMYKALLE-DGT----SLMVKRLQDS--QRSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLL 377 (623)
Q Consensus 305 ~~f~~~~~lG~G~~g~Vy~~~~~-~~~----~vavK~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 377 (623)
++|...+.||+|+||.||+|.+. ++. +|++|.+... ....+.+.+|++++.+++||||+++++++.+.. .++
T Consensus 15 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-~~~ 93 (327)
T 3poz_A 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQL 93 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEESSS-EEE
T ss_pred HHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC-eEE
Confidence 56888999999999999999954 344 3688887543 245678999999999999999999999998754 789
Q ss_pred EEecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeeccccccc
Q 006982 378 VYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLM 457 (623)
Q Consensus 378 V~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~ 457 (623)
|+||+++|+|.+++... ...+++..++.++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++..
T Consensus 94 v~e~~~~g~L~~~l~~~---~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~ 167 (327)
T 3poz_A 94 ITQLMPFGCLLDYVREH---KDNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLL 167 (327)
T ss_dssp EEECCTTCBHHHHHHHS---TTSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEETTEEEECCTTHHHHH
T ss_pred EEEecCCCcHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCChheEEECCCCCEEEccCcceeEc
Confidence 99999999999999643 24689999999999999999999999 9999999999999999999999999999876
Q ss_pred CCCCCcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCcccccccHHHHHHHHhccCc
Q 006982 458 NPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVT-GERPTNVAKAPETFKGNLVEWIAQLSSTGQ 536 (623)
Q Consensus 458 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~ellt-g~~P~~~~~~~~~~~~~l~~~~~~~~~~~~ 536 (623)
........ .....+|+.|+|||++.+..++.++|||||||++|||++ |+.||...... .+...+....
T Consensus 168 ~~~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~-----~~~~~~~~~~---- 236 (327)
T 3poz_A 168 GAEEKEYH--AEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS-----EISSILEKGE---- 236 (327)
T ss_dssp TTTCC---------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGG-----GHHHHHHTTC----
T ss_pred cCCccccc--ccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCHH-----HHHHHHHcCC----
Confidence 54322211 123346889999999999999999999999999999999 99999753321 1222111110
Q ss_pred hhhhhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHhhcc
Q 006982 537 LQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAIGER 589 (623)
Q Consensus 537 ~~~~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~L~~i~~~ 589 (623)
...........+..++..|+. .+|++||++.|+++.|+.+...
T Consensus 237 ---------~~~~~~~~~~~~~~li~~~l~-~~p~~Rps~~ell~~l~~~~~~ 279 (327)
T 3poz_A 237 ---------RLPQPPICTIDVYMIMVKCWM-IDADSRPKFRELIIEFSKMARD 279 (327)
T ss_dssp ---------CCCCCTTBCHHHHHHHHHHTC-SCGGGSCCHHHHHHHHHHHHTS
T ss_pred ---------CCCCCccCCHHHHHHHHHHcC-CChhhCCCHHHHHHHHHHHHhh
Confidence 000011112245556667887 9999999999999999988654
No 38
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=100.00 E-value=2.1e-40 Score=338.69 Aligned_cols=249 Identities=23% Similarity=0.383 Sum_probs=198.9
Q ss_pred hccCcccceeeccCccEEEEEEe-CCCcEEEEEEecccc-ccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEEec
Q 006982 304 TNSFSKNNIIGSGRTGTMYKALL-EDGTSLMVKRLQDSQ-RSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKH 381 (623)
Q Consensus 304 ~~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 381 (623)
.++|...+.||+|+||.||+|.. .+++.||+|++.... ...+.+.+|+.++++++||||+++++++...+..++||||
T Consensus 19 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 98 (297)
T 3fxz_A 19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEY 98 (297)
T ss_dssp GGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred hhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEEEEC
Confidence 35789999999999999999995 578999999986543 4466789999999999999999999999999999999999
Q ss_pred CCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCCCC
Q 006982 382 MPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPID 461 (623)
Q Consensus 382 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~~~ 461 (623)
+++|+|.+++.. ..+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||++.......
T Consensus 99 ~~~~~L~~~~~~-----~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 170 (297)
T 3fxz_A 99 LAGGSLTDVVTE-----TCMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ 170 (297)
T ss_dssp CTTCBHHHHHHH-----SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECCSTT
T ss_pred CCCCCHHHHHhh-----cCCCHHHHHHHHHHHHHHHHHHHhC---CceeCCCCHHHEEECCCCCEEEeeCCCceecCCcc
Confidence 999999999953 3588999999999999999999999 99999999999999999999999999998765433
Q ss_pred CcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCcccccccHHHHHHHHhccCchhhhh
Q 006982 462 THLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAI 541 (623)
Q Consensus 462 ~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 541 (623)
... ....||+.|+|||++.+..++.++|||||||++|||++|+.||...... ........... ....
T Consensus 171 ~~~----~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~--------~~~~~~~~~~~-~~~~ 237 (297)
T 3fxz_A 171 SKR----STMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPL--------RALYLIATNGT-PELQ 237 (297)
T ss_dssp CCB----CCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH--------HHHHHHHHHCS-CCCS
T ss_pred ccc----CCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH--------HHHHHHHhCCC-CCCC
Confidence 221 2345899999999999999999999999999999999999999653221 11111100000 0000
Q ss_pred chhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHH
Q 006982 542 DKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQ 581 (623)
Q Consensus 542 d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~ 581 (623)
. ....++++ ..++..|+. .||++|||++|+++
T Consensus 238 ~----~~~~~~~~---~~li~~~l~-~dp~~Rps~~ell~ 269 (297)
T 3fxz_A 238 N----PEKLSAIF---RDFLNRCLE-MDVEKRGSAKELLQ 269 (297)
T ss_dssp C----GGGSCHHH---HHHHHHHSC-SSTTTSCCHHHHTT
T ss_pred C----ccccCHHH---HHHHHHHcc-CChhHCcCHHHHhh
Confidence 0 01122333 344456776 99999999999976
No 39
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=100.00 E-value=1e-40 Score=364.98 Aligned_cols=259 Identities=25% Similarity=0.415 Sum_probs=209.6
Q ss_pred hccCcccceeeccCccEEEEEEeCC-CcEEEEEEeccccccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEEecC
Q 006982 304 TNSFSKNNIIGSGRTGTMYKALLED-GTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKHM 382 (623)
Q Consensus 304 ~~~f~~~~~lG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~ 382 (623)
..+|...+.||+|+||.||+|.+.. +..||+|.++......+.|.+|++++.+++||||++++++|.+....++||||+
T Consensus 219 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~E~~ 298 (495)
T 1opk_A 219 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFM 298 (495)
T ss_dssp GGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSSSCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECC
T ss_pred HHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcccchHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEEEEEcc
Confidence 3567888999999999999999764 889999999877667888999999999999999999999999999999999999
Q ss_pred CCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCCCCC
Q 006982 383 PNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDT 462 (623)
Q Consensus 383 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~~~~ 462 (623)
++|+|.+++.... ...+++..++.++.|++.||+|||+. +|+||||||+|||+++++.+||+|||+++.......
T Consensus 299 ~~g~L~~~l~~~~--~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~ 373 (495)
T 1opk_A 299 TYGNLLDYLRECN--RQEVSAVVLLYMATQISSAMEYLEKK---NFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTY 373 (495)
T ss_dssp TTCBHHHHHHHSC--TTTSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECGGGCEEECCTTCEECCTTCCE
T ss_pred CCCCHHHHHHhcC--cCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChhhEEECCCCcEEEeecccceeccCCce
Confidence 9999999996532 25689999999999999999999999 999999999999999999999999999987643221
Q ss_pred cccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCcccccccHHHHHHHHhccCchhhhh
Q 006982 463 HLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVT-GERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAI 541 (623)
Q Consensus 463 ~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~ellt-g~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 541 (623)
....+..+++.|+|||++....++.++|||||||++|||++ |+.||...... .+.+.+..... .
T Consensus 374 ---~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~-----~~~~~~~~~~~---~---- 438 (495)
T 1opk_A 374 ---TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS-----QVYELLEKDYR---M---- 438 (495)
T ss_dssp ---ECCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGG-----GHHHHHHTTCC---C----
T ss_pred ---eecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHH-----HHHHHHHcCCC---C----
Confidence 11223346789999999998899999999999999999999 99998754321 11221111000 0
Q ss_pred chhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHhhcc
Q 006982 542 DKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAIGER 589 (623)
Q Consensus 542 d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~L~~i~~~ 589 (623)
-.....++++. +++..|+. .||++|||+.+|++.|+.+.+.
T Consensus 439 ---~~~~~~~~~l~---~li~~cl~-~dP~~RPs~~el~~~L~~~~~~ 479 (495)
T 1opk_A 439 ---ERPEGCPEKVY---ELMRACWQ-WNPSDRPSFAEIHQAFETMFQE 479 (495)
T ss_dssp ---CCCTTCCHHHH---HHHHHHTC-SSGGGSCCHHHHHHHHHTSCSS
T ss_pred ---CCCCCCCHHHH---HHHHHHcC-cChhHCcCHHHHHHHHHHHHhc
Confidence 00112334444 44556777 9999999999999999987543
No 40
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=3.3e-40 Score=331.22 Aligned_cols=257 Identities=23% Similarity=0.374 Sum_probs=208.8
Q ss_pred ccCcccceeeccCccEEEEEEeCCCcEEEEEEeccccccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEEecCCC
Q 006982 305 NSFSKNNIIGSGRTGTMYKALLEDGTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKHMPN 384 (623)
Q Consensus 305 ~~f~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~ 384 (623)
++|...+.||+|+||.||++...++..||+|++.......+.+.+|++++.+++||||+++++++.+.+..++||||+++
T Consensus 8 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~ 87 (267)
T 3t9t_A 8 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFMEH 87 (267)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTTBCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEECCCTT
T ss_pred hheeeeeEecCCCceeEEEEEecCCCeEEEEEccccCCCHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEEeCCCC
Confidence 56788899999999999999998899999999988777778899999999999999999999999999999999999999
Q ss_pred CCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCCCCCcc
Q 006982 385 GSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHL 464 (623)
Q Consensus 385 gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~~~~~~ 464 (623)
|+|.+++... ...+++..++.++.|++.||+|||+. +++||||||+||+++.++.+||+|||+++......
T Consensus 88 ~~L~~~~~~~---~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~--- 158 (267)
T 3t9t_A 88 GCLSDYLRTQ---RGLFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQ--- 158 (267)
T ss_dssp CBHHHHHHHT---TTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECGGGCEEECCTTGGGGBCCHH---
T ss_pred CcHHHHHhhC---cccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCchheEEECCCCCEEEccccccccccccc---
Confidence 9999999643 24689999999999999999999999 99999999999999999999999999998764311
Q ss_pred cccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCcccccccHHHHHHHHhccCchhhhhch
Q 006982 465 STFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVT-GERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAIDK 543 (623)
Q Consensus 465 ~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~ellt-g~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~ 543 (623)
........++..|+|||.+.+..++.++||||||+++|||++ |+.||..... .+.......... .
T Consensus 159 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~--------~~~~~~i~~~~~------~ 224 (267)
T 3t9t_A 159 YTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSN--------SEVVEDISTGFR------L 224 (267)
T ss_dssp HHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCH--------HHHHHHHHTTCC------C
T ss_pred ccccccccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCH--------HHHHHHHhcCCc------C
Confidence 111223447789999999998889999999999999999999 8999865321 111111111100 0
Q ss_pred hhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHhhcc
Q 006982 544 CLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAIGER 589 (623)
Q Consensus 544 ~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~L~~i~~~ 589 (623)
......+++ +.+++..|+. .||++||++.|+++.|+++.++
T Consensus 225 -~~~~~~~~~---l~~li~~~l~-~~p~~Rps~~~ll~~L~~l~~~ 265 (267)
T 3t9t_A 225 -YKPRLASTH---VYQIMNHCWR-ERPEDRPAFSRLLRQLAEIAES 265 (267)
T ss_dssp -CCCTTSCHH---HHHHHHHHTC-SSGGGSCCHHHHHHHHHHHHHC
T ss_pred -CCCccCcHH---HHHHHHHHcc-CChhhCcCHHHHHHHHHHHHhc
Confidence 001112333 3445556776 9999999999999999998764
No 41
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=100.00 E-value=4.5e-40 Score=338.42 Aligned_cols=262 Identities=22% Similarity=0.355 Sum_probs=206.4
Q ss_pred hccCcccceeeccCccEEEEEEe------CCCcEEEEEEecccc--ccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCee
Q 006982 304 TNSFSKNNIIGSGRTGTMYKALL------EDGTSLMVKRLQDSQ--RSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKER 375 (623)
Q Consensus 304 ~~~f~~~~~lG~G~~g~Vy~~~~------~~~~~vavK~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 375 (623)
.++|...+.||+|+||.||+|.. .++..||+|++.... ...+.+.+|++++.+++||||+++++++.+.+..
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~ 101 (314)
T 2ivs_A 22 RKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPL 101 (314)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSC
T ss_pred hhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEecCCce
Confidence 45788889999999999999985 345789999997543 3346788999999999999999999999999999
Q ss_pred eEEEecCCCCCHhhhccCCCC--------------------CCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCC
Q 006982 376 LLVYKHMPNGSLYDLLHPADD--------------------TGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISS 435 (623)
Q Consensus 376 ~lV~e~~~~gsL~~~l~~~~~--------------------~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~ 435 (623)
++||||+++|+|.+++..... ....+++..++.++.|++.||+|||+. +|+||||||
T Consensus 102 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dikp 178 (314)
T 2ivs_A 102 LLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEM---KLVHRDLAA 178 (314)
T ss_dssp EEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHT---TEECCCCSG
T ss_pred EEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHC---CCcccccch
Confidence 999999999999999975432 123589999999999999999999999 999999999
Q ss_pred CceeeCCCCCeEEeecccccccCCCCCcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCC
Q 006982 436 KCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVT-GERPTNVA 514 (623)
Q Consensus 436 ~NILl~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~ellt-g~~P~~~~ 514 (623)
+||++++++.+||+|||+++......... ......+|+.|+|||.+.+..++.++||||||+++|||++ |+.||...
T Consensus 179 ~NIli~~~~~~kl~Dfg~~~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~ 256 (314)
T 2ivs_A 179 RNILVAEGRKMKISDFGLSRDVYEEDSYV--KRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGI 256 (314)
T ss_dssp GGEEEETTTEEEECCCTTCEECTTTSCEE--CSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTC
T ss_pred heEEEcCCCCEEEccccccccccccccce--eccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence 99999999999999999998765432211 1122347889999999998889999999999999999999 99999753
Q ss_pred CCcccccccHHHHHHHHhccCchhhhhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHhhcc
Q 006982 515 KAPETFKGNLVEWIAQLSSTGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAIGER 589 (623)
Q Consensus 515 ~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~L~~i~~~ 589 (623)
... .+...+...... . .....++++ ..++..|+. .||++||++.|+++.|+++.++
T Consensus 257 ~~~-----~~~~~~~~~~~~---------~-~~~~~~~~~---~~li~~~l~-~dp~~Rps~~~l~~~l~~~~~~ 312 (314)
T 2ivs_A 257 PPE-----RLFNLLKTGHRM---------E-RPDNCSEEM---YRLMLQCWK-QEPDKRPVFADISKDLEKMMVK 312 (314)
T ss_dssp CGG-----GHHHHHHTTCCC---------C-CCTTCCHHH---HHHHHHHTC-SSGGGSCCHHHHHHHHHHHHHT
T ss_pred CHH-----HHHHHhhcCCcC---------C-CCccCCHHH---HHHHHHHcc-CChhhCcCHHHHHHHHHHHHhh
Confidence 321 122211111000 0 011223344 444556776 9999999999999999998654
No 42
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.6e-39 Score=337.78 Aligned_cols=275 Identities=23% Similarity=0.313 Sum_probs=200.0
Q ss_pred HHhccCcccceeeccCccEEEEEEeCCCcEEEEEEeccccccHHHHHHHHHHhCCCCCCCCcceeEEEEeC----CeeeE
Q 006982 302 KATNSFSKNNIIGSGRTGTMYKALLEDGTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGFCMAK----KERLL 377 (623)
Q Consensus 302 ~~~~~f~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~----~~~~l 377 (623)
...++|...+.||+|+||.||+|+.. ++.||+|++..........+.|+.....++||||+++++++... ...++
T Consensus 34 ~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~l 112 (337)
T 3mdy_A 34 TIAKQIQMVKQIGKGRYGEVWMGKWR-GEKVAVKVFFTTEEASWFRETEIYQTVLMRHENILGFIAADIKGTGSWTQLYL 112 (337)
T ss_dssp THHHHCEEEEEEEEETTEEEEEEEET-TEEEEEEEEEGGGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGGGCEEEE
T ss_pred ccccceEEEeEeecCCCeEEEEEEEC-CceEEEEEEeccccchhhhHHHHHHHHhhcCCCeeeEEEEEccCCCCCCceEE
Confidence 34568999999999999999999986 89999999865543333333444444455999999999999887 67899
Q ss_pred EEecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcC-----CCCcEecCCCCCceeeCCCCCeEEeecc
Q 006982 378 VYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNC-----NPRIIHRNISSKCILLDDDFEPKISDFG 452 (623)
Q Consensus 378 V~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~-----~~~i~H~dlk~~NILl~~~~~~kl~Dfg 452 (623)
||||+++|+|.++++. ..+++..++.++.|++.||+|||+.+ .++|+||||||+|||++.++.+||+|||
T Consensus 113 v~e~~~~g~L~~~l~~-----~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfg 187 (337)
T 3mdy_A 113 ITDYHENGSLYDYLKS-----TTLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLG 187 (337)
T ss_dssp EECCCTTCBHHHHHHH-----CCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCT
T ss_pred EEeccCCCcHHHHhhc-----cCCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECCCCCEEEEeCC
Confidence 9999999999999953 35899999999999999999999762 3489999999999999999999999999
Q ss_pred cccccCCCCCcccccccCCCCcccccCcccccCCCCCcc------hhHHHHHHHHHHHHhC----------CCCCCCCCC
Q 006982 453 LARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPK------GDVYSFGTVLLELVTG----------ERPTNVAKA 516 (623)
Q Consensus 453 la~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k------~DV~sfGvil~elltg----------~~P~~~~~~ 516 (623)
+++.................||+.|+|||++.+...+.+ +|||||||++|||+|| ..||.....
T Consensus 188 ~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~p~~~~~~ 267 (337)
T 3mdy_A 188 LAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYHDLVP 267 (337)
T ss_dssp TCEECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSC
T ss_pred CceeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCcccccccccccHhhhcC
Confidence 998765433322222234568999999999987766655 9999999999999999 555543222
Q ss_pred cccccccHHHHHHHHhccCchhhhhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHhhccc
Q 006982 517 PETFKGNLVEWIAQLSSTGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAIGERY 590 (623)
Q Consensus 517 ~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~L~~i~~~~ 590 (623)
... ........ .........+...+.. .+....+.+++..|+. .||++|||+.||++.|+++.+..
T Consensus 268 ~~~---~~~~~~~~-~~~~~~~~~~~~~~~~---~~~~~~l~~li~~~l~-~dP~~Rps~~ell~~L~~l~~~~ 333 (337)
T 3mdy_A 268 SDP---SYEDMREI-VCIKKLRPSFPNRWSS---DECLRQMGKLMTECWA-HNPASRLTALRVKKTLAKMSESQ 333 (337)
T ss_dssp SSC---CHHHHHHH-HTTSCCCCCCCGGGGG---SHHHHHHHHHHHHHSC-SSGGGSCCHHHHHHHHHHHHHTT
T ss_pred CCC---chhhhHHH-HhhhccCccccccchh---hHHHHHHHHHHHHhhh-hChhhCCCHHHHHHHHHHHHhhc
Confidence 111 11111111 1111111111111111 1334456667778887 99999999999999999987754
No 43
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=100.00 E-value=4.4e-40 Score=348.54 Aligned_cols=266 Identities=24% Similarity=0.370 Sum_probs=208.2
Q ss_pred hccCcccceeeccCccEEEEEEeC--------CCcEEEEEEecccc--ccHHHHHHHHHHhCCC-CCCCCcceeEEEEeC
Q 006982 304 TNSFSKNNIIGSGRTGTMYKALLE--------DGTSLMVKRLQDSQ--RSEKEFVAEMATLGSV-KNRNLVPLLGFCMAK 372 (623)
Q Consensus 304 ~~~f~~~~~lG~G~~g~Vy~~~~~--------~~~~vavK~~~~~~--~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~ 372 (623)
.++|...+.||+|+||.||+|... ++..||+|++.... .....+.+|++++.++ +||||+++++++.+.
T Consensus 68 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~ 147 (382)
T 3tt0_A 68 RDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQD 147 (382)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred hhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeeeccC
Confidence 357888899999999999999852 34679999997643 3346788999999999 999999999999999
Q ss_pred CeeeEEEecCCCCCHhhhccCCCC------------CCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceee
Q 006982 373 KERLLVYKHMPNGSLYDLLHPADD------------TGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILL 440 (623)
Q Consensus 373 ~~~~lV~e~~~~gsL~~~l~~~~~------------~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl 440 (623)
+..++||||+++|+|.+++..... ....+++..++.++.|++.||+|||+. +|+||||||+|||+
T Consensus 148 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll 224 (382)
T 3tt0_A 148 GPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK---KCIHRDLAARNVLV 224 (382)
T ss_dssp SSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEE
T ss_pred CceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCcceEEE
Confidence 999999999999999999965432 124689999999999999999999999 99999999999999
Q ss_pred CCCCCeEEeecccccccCCCCCcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCccc
Q 006982 441 DDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVT-GERPTNVAKAPET 519 (623)
Q Consensus 441 ~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~ellt-g~~P~~~~~~~~~ 519 (623)
++++.+||+|||+++......... ......+|+.|+|||++.+..++.++|||||||++|||++ |..||.....
T Consensus 225 ~~~~~~kL~DFG~a~~~~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~~~--- 299 (382)
T 3tt0_A 225 TEDNVMKIADFGLARDIHHIDYYK--KTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPV--- 299 (382)
T ss_dssp CTTCCEEECSCSCCCCSSCCCTTC--CCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCH---
T ss_pred cCCCcEEEcccCcccccccccccc--cccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCH---
Confidence 999999999999998765432211 1122347889999999999999999999999999999999 9999864321
Q ss_pred ccccHHHHHHHHhccCchhhhhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHhhcccCCC
Q 006982 520 FKGNLVEWIAQLSSTGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAIGERYHFT 593 (623)
Q Consensus 520 ~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~L~~i~~~~~~~ 593 (623)
.+........... . ......++ +.+++..|+. .||++|||++||++.|+++.......
T Consensus 300 -----~~~~~~~~~~~~~-~------~~~~~~~~---l~~li~~~l~-~dP~~Rps~~ell~~L~~~~~~~~~~ 357 (382)
T 3tt0_A 300 -----EELFKLLKEGHRM-D------KPSNCTNE---LYMMMRDCWH-AVPSQRPTFKQLVEDLDRIVALTSNQ 357 (382)
T ss_dssp -----HHHHHHHHTTCCC-C------CCSSCCHH---HHHHHHHHTC-SSGGGSCCHHHHHHHHHHHHHHSCSC
T ss_pred -----HHHHHHHHcCCCC-C------CCccCCHH---HHHHHHHHcC-CChhhCcCHHHHHHHHHHHHHHHhcC
Confidence 1111111111000 0 01123334 4444556776 99999999999999999987655433
No 44
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=100.00 E-value=2.9e-40 Score=344.35 Aligned_cols=265 Identities=25% Similarity=0.399 Sum_probs=206.8
Q ss_pred HhccCcccceeeccCccEEEEEEeC------CCcEEEEEEecccc--ccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCe
Q 006982 303 ATNSFSKNNIIGSGRTGTMYKALLE------DGTSLMVKRLQDSQ--RSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKE 374 (623)
Q Consensus 303 ~~~~f~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~ 374 (623)
..++|...+.||+|+||.||+|... +++.||+|+++... ...+.+.+|++++.+++||||+++++++.+.+.
T Consensus 45 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~ 124 (343)
T 1luf_A 45 PRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKP 124 (343)
T ss_dssp CGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSS
T ss_pred cHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEccCCc
Confidence 4578999999999999999999974 34789999997543 335678999999999999999999999999999
Q ss_pred eeEEEecCCCCCHhhhccCCCCC--------------------CCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCC
Q 006982 375 RLLVYKHMPNGSLYDLLHPADDT--------------------GKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNIS 434 (623)
Q Consensus 375 ~~lV~e~~~~gsL~~~l~~~~~~--------------------~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk 434 (623)
.++||||+++|+|.+++...... ...+++..++.++.|++.||.|||+. +|+|||||
T Consensus 125 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlk 201 (343)
T 1luf_A 125 MCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSER---KFVHRDLA 201 (343)
T ss_dssp CEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCS
T ss_pred eEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCC
Confidence 99999999999999999653211 25689999999999999999999999 99999999
Q ss_pred CCceeeCCCCCeEEeecccccccCCCCCcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCC
Q 006982 435 SKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVT-GERPTNV 513 (623)
Q Consensus 435 ~~NILl~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~ellt-g~~P~~~ 513 (623)
|+||+++.++.+||+|||+++........ .......+|+.|+|||.+.+..++.++||||||+++|||++ |+.||..
T Consensus 202 p~NIl~~~~~~~kl~Dfg~~~~~~~~~~~--~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~ 279 (343)
T 1luf_A 202 TRNCLVGENMVVKIADFGLSRNIYSADYY--KADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYG 279 (343)
T ss_dssp GGGEEECGGGCEEECCCSCHHHHTGGGCB--C----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTT
T ss_pred cceEEECCCCeEEEeecCCCcccccCccc--cccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCCcCCC
Confidence 99999999999999999999876432211 11223457899999999998889999999999999999999 9999975
Q ss_pred CCCcccccccHHHHHHHHhccCchhhhhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHhhcccC
Q 006982 514 AKAPETFKGNLVEWIAQLSSTGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAIGERYH 591 (623)
Q Consensus 514 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~L~~i~~~~~ 591 (623)
... .+...... ...... .....+.+ +..++..|+. .||++||++.|+++.|+++.+++.
T Consensus 280 ~~~--------~~~~~~~~-~~~~~~------~~~~~~~~---l~~li~~~l~-~~p~~Rps~~~~~~~L~~~~~~~~ 338 (343)
T 1luf_A 280 MAH--------EEVIYYVR-DGNILA------CPENCPLE---LYNLMRLCWS-KLPADRPSFCSIHRILQRMCERAE 338 (343)
T ss_dssp SCH--------HHHHHHHH-TTCCCC------CCTTCCHH---HHHHHHHHTC-SSGGGSCCHHHHHHHHHHTTC---
T ss_pred CCh--------HHHHHHHh-CCCcCC------CCCCCCHH---HHHHHHHHcc-cCcccCCCHHHHHHHHHHHHhhhh
Confidence 321 11111111 111100 01122334 4444556776 999999999999999999987664
No 45
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=100.00 E-value=3.9e-40 Score=336.12 Aligned_cols=266 Identities=23% Similarity=0.388 Sum_probs=199.8
Q ss_pred ccCcccceeeccCccEEEEEEe-----CCCcEEEEEEecccc-ccHHHHHHHHHHhCCCCCCCCcceeEEEEeC--Ceee
Q 006982 305 NSFSKNNIIGSGRTGTMYKALL-----EDGTSLMVKRLQDSQ-RSEKEFVAEMATLGSVKNRNLVPLLGFCMAK--KERL 376 (623)
Q Consensus 305 ~~f~~~~~lG~G~~g~Vy~~~~-----~~~~~vavK~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~~ 376 (623)
++|...+.||+|+||.||++++ .+++.||+|++.... ...+.+.+|++++.+++||||+++++++... ...+
T Consensus 10 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 89 (295)
T 3ugc_A 10 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLK 89 (295)
T ss_dssp GGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHTSCE
T ss_pred HHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCceE
Confidence 5688889999999999999984 368899999997643 3446789999999999999999999998654 4578
Q ss_pred EEEecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccc
Q 006982 377 LVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARL 456 (623)
Q Consensus 377 lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~ 456 (623)
+||||+++|+|.+++... ...+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.
T Consensus 90 lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~~~~ 163 (295)
T 3ugc_A 90 LIMEYLPYGSLRDYLQKH---KERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKV 163 (295)
T ss_dssp EEEECCTTCBHHHHHHHC---GGGCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCCSCC-
T ss_pred EEEEeCCCCCHHHHHHhc---ccccCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHhhEEEcCCCeEEEccCccccc
Confidence 999999999999999643 24589999999999999999999999 999999999999999999999999999987
Q ss_pred cCCCCCcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCcccccccHHHHHHHHhccC-
Q 006982 457 MNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTG- 535 (623)
Q Consensus 457 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~~~~~~~~~~~l~~~~~~~~~~~- 535 (623)
........ .......++..|+|||.+.+..++.++||||||+++|||++|..|+..... .+........
T Consensus 164 ~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~---------~~~~~~~~~~~ 233 (295)
T 3ugc_A 164 LPQDKEFF-KVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPA---------EFMRMIGNDKQ 233 (295)
T ss_dssp -------------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHH---------HHHHHHCTTCC
T ss_pred ccCCccee-eeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChH---------HHHhhhcCccc
Confidence 65432211 112233467889999999999999999999999999999999999864211 0000000000
Q ss_pred ------chhhhhchhhh---cCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHhhccc
Q 006982 536 ------QLQDAIDKCLV---AKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAIGERY 590 (623)
Q Consensus 536 ------~~~~~~d~~l~---~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~L~~i~~~~ 590 (623)
.+.+.+..... ....+++ +.+++..|+. .||++|||+.|+++.|+++++..
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---l~~li~~~l~-~dp~~Rps~~el~~~L~~l~~~l 293 (295)
T 3ugc_A 234 GQMIVFHLIELLKNNGRLPRPDGCPDE---IYMIMTECWN-NNVNQRPSFRDLALRVDQIRDNM 293 (295)
T ss_dssp THHHHHHHHHHHHTTCCCCCCTTCCHH---HHHHHHHHSC-SSGGGSCCHHHHHHHHHHHHHC-
T ss_pred cchhHHHHHHHHhccCcCCCCcCcCHH---HHHHHHHHcC-CChhhCCCHHHHHHHHHHHHHhc
Confidence 00001110000 1122334 4445556777 99999999999999999998754
No 46
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=100.00 E-value=1.6e-40 Score=348.64 Aligned_cols=271 Identities=23% Similarity=0.325 Sum_probs=208.6
Q ss_pred CHHHHHHHhccCcccceeeccCccEEEEEEe------CCCcEEEEEEecccc--ccHHHHHHHHHHhCCC-CCCCCccee
Q 006982 296 RLSDLMKATNSFSKNNIIGSGRTGTMYKALL------EDGTSLMVKRLQDSQ--RSEKEFVAEMATLGSV-KNRNLVPLL 366 (623)
Q Consensus 296 ~~~~l~~~~~~f~~~~~lG~G~~g~Vy~~~~------~~~~~vavK~~~~~~--~~~~~~~~e~~~l~~l-~h~niv~l~ 366 (623)
...++....++|...+.||+|+||.||+|.+ .+++.||+|++.... ...+.+.+|++++.++ +||||++++
T Consensus 13 ~~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~ 92 (359)
T 3vhe_A 13 DASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLL 92 (359)
T ss_dssp CHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred CcccccccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceeeee
Confidence 3444555567899999999999999999973 346789999997643 2345789999999999 789999999
Q ss_pred EEEEeCCe-eeEEEecCCCCCHhhhccCCCCC------------------------------------------------
Q 006982 367 GFCMAKKE-RLLVYKHMPNGSLYDLLHPADDT------------------------------------------------ 397 (623)
Q Consensus 367 ~~~~~~~~-~~lV~e~~~~gsL~~~l~~~~~~------------------------------------------------ 397 (623)
+++.+.+. .++||||+++|+|.++++.....
T Consensus 93 ~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (359)
T 3vhe_A 93 GACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKS 172 (359)
T ss_dssp EEECSTTSCCEEEEECCTTEEHHHHHHTTTTSBCSCC-------------------------------------------
T ss_pred eeeecCCCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccccccc
Confidence 99987654 88999999999999999754321
Q ss_pred --------------CCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCCCCCc
Q 006982 398 --------------GKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTH 463 (623)
Q Consensus 398 --------------~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~~~~~ 463 (623)
...+++..++.++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++........
T Consensus 173 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~ 249 (359)
T 3vhe_A 173 LSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDY 249 (359)
T ss_dssp -----------CTTTTCBCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCTTC
T ss_pred cchhhhcccccchhccccCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEEcCCCcEEEEeccceeeecccccc
Confidence 12289999999999999999999999 9999999999999999999999999999876432221
Q ss_pred ccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCcccccccHHHHHHHHhccCchhhhhc
Q 006982 464 LSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVT-GERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAID 542 (623)
Q Consensus 464 ~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~ellt-g~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d 542 (623)
.......||+.|+|||++.+..++.++||||||+++|||+| |+.||......+ .....+..... ..
T Consensus 250 --~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~----~~~~~~~~~~~-~~------ 316 (359)
T 3vhe_A 250 --VRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE----EFCRRLKEGTR-MR------ 316 (359)
T ss_dssp --EEC--CEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSH----HHHHHHHHTCC-CC------
T ss_pred --hhccccCCCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhH----HHHHHHHcCCC-CC------
Confidence 11223447889999999999999999999999999999998 999997543321 11111111000 00
Q ss_pred hhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHhhcc
Q 006982 543 KCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAIGER 589 (623)
Q Consensus 543 ~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~L~~i~~~ 589 (623)
......+++ .+++..|+. .||++|||+.|++++|+++.+.
T Consensus 317 ---~~~~~~~~l---~~li~~~l~-~dP~~Rps~~ell~~L~~~~~~ 356 (359)
T 3vhe_A 317 ---APDYTTPEM---YQTMLDCWH-GEPSQRPTFSELVEHLGNLLQA 356 (359)
T ss_dssp ---CCTTCCHHH---HHHHHHHTC-SSGGGSCCHHHHHHHHHHHHHH
T ss_pred ---CCCCCCHHH---HHHHHHHcc-CChhhCCCHHHHHHHHHHHHHH
Confidence 011123344 444556777 9999999999999999998653
No 47
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=100.00 E-value=2.5e-40 Score=358.07 Aligned_cols=259 Identities=26% Similarity=0.386 Sum_probs=202.3
Q ss_pred hccCcccceeeccCccEEEEEEeCCCcEEEEEEeccccccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEEecCC
Q 006982 304 TNSFSKNNIIGSGRTGTMYKALLEDGTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKHMP 383 (623)
Q Consensus 304 ~~~f~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~ 383 (623)
.++|...+.||+|+||.||+|.+.++..||+|+++......+.|.+|++++++++||||+++++++.+ +..++||||++
T Consensus 183 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~iv~e~~~ 261 (452)
T 1fmk_A 183 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMS 261 (452)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECCCT
T ss_pred hhHceeeeeecCCCCeEEEEEEECCCceEEEEEeccCCCCHHHHHHHHHHHHhCCCCCEeeEEEEEcC-CceEEEehhhc
Confidence 35678889999999999999999888899999998766667889999999999999999999999876 67899999999
Q ss_pred CCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCCCCCc
Q 006982 384 NGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTH 463 (623)
Q Consensus 384 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~~~~~ 463 (623)
+|+|.+++.... +..+++..++.++.|++.||+|||+. +|+||||||+|||+++++.+||+|||+++........
T Consensus 262 ~gsL~~~l~~~~--~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~ 336 (452)
T 1fmk_A 262 KGSLLDFLKGET--GKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYT 336 (452)
T ss_dssp TCBHHHHHSHHH--HTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCCTTC--------
T ss_pred CCCHHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChhhEEECCCCCEEECCCccceecCCCcee
Confidence 999999996321 24589999999999999999999999 9999999999999999999999999999876432211
Q ss_pred ccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCcccccccHHHHHHHHhccCchhhhhc
Q 006982 464 LSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVT-GERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAID 542 (623)
Q Consensus 464 ~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~ellt-g~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d 542 (623)
...+..+++.|+|||.+....++.++|||||||++|||++ |+.||..... .+...........
T Consensus 337 ---~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~--------~~~~~~i~~~~~~----- 400 (452)
T 1fmk_A 337 ---ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN--------REVLDQVERGYRM----- 400 (452)
T ss_dssp ---------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCH--------HHHHHHHHTTCCC-----
T ss_pred ---cccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCH--------HHHHHHHHcCCCC-----
Confidence 1122346789999999998899999999999999999999 9999865322 1111111111000
Q ss_pred hhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHhhccc
Q 006982 543 KCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAIGERY 590 (623)
Q Consensus 543 ~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~L~~i~~~~ 590 (623)
-.....+++ +.+++..|+. .||++|||++++++.|+++....
T Consensus 401 --~~~~~~~~~---l~~li~~cl~-~dP~~Rpt~~~l~~~L~~~~~~~ 442 (452)
T 1fmk_A 401 --PCPPECPES---LHDLMCQCWR-KEPEERPTFEYLQAFLEDYFTST 442 (452)
T ss_dssp --CCCTTSCHH---HHHHHHHHTC-SSGGGSCCHHHHHHHHHTTTSCS
T ss_pred --CCCCCCCHH---HHHHHHHHcc-CChhhCcCHHHHHHHHHHHhccC
Confidence 001122333 3445567777 99999999999999999886543
No 48
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=100.00 E-value=6.9e-40 Score=339.38 Aligned_cols=247 Identities=20% Similarity=0.293 Sum_probs=197.8
Q ss_pred hccCcccceeeccCccEEEEEEe-CCCcEEEEEEecccc---ccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEE
Q 006982 304 TNSFSKNNIIGSGRTGTMYKALL-EDGTSLMVKRLQDSQ---RSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVY 379 (623)
Q Consensus 304 ~~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 379 (623)
.++|...+.||+|+||.||+|.. .+|+.||+|++.... ...+.+.+|++++++++||||+++++++.+.+..++||
T Consensus 14 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~ 93 (328)
T 3fe3_A 14 IGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIM 93 (328)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEE
Confidence 35788899999999999999996 579999999996543 23456889999999999999999999999999999999
Q ss_pred ecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCC
Q 006982 380 KHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNP 459 (623)
Q Consensus 380 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~ 459 (623)
||+++|+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++....
T Consensus 94 e~~~~~~L~~~l~~~----~~l~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~ 166 (328)
T 3fe3_A 94 EYASGGEVFDYLVAH----GRMKEKEARSKFRQIVSAVQYCHQK---RIVHRDLKAENLLLDADMNIKIADFGFSNEFTV 166 (328)
T ss_dssp CCCTTCBHHHHHHHH----CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECSTTCCGGGSS
T ss_pred ECCCCCcHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHC---CEeccCCCHHHEEEcCCCCEEEeeccCceecCC
Confidence 999999999998532 4589999999999999999999999 999999999999999999999999999987654
Q ss_pred CCCcccccccCCCCcccccCcccccCCCCC-cchhHHHHHHHHHHHHhCCCCCCCCCCcccccccHHHHHHHHhccCchh
Q 006982 460 IDTHLSTFVNGEFGDLGYVAPEYARTLVAT-PKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQ 538 (623)
Q Consensus 460 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s-~k~DV~sfGvil~elltg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 538 (623)
... .....||+.|+|||++.+..++ .++||||+||++|||++|+.||..... ............
T Consensus 167 ~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~--------~~~~~~i~~~~~-- 231 (328)
T 3fe3_A 167 GGK-----LDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNL--------KELRERVLRGKY-- 231 (328)
T ss_dssp SCG-----GGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSSH--------HHHHHHHHHCCC--
T ss_pred CCc-----cccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCCH--------HHHHHHHHhCCC--
Confidence 221 2334589999999999887765 799999999999999999999975321 111111111100
Q ss_pred hhhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHH
Q 006982 539 DAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQF 582 (623)
Q Consensus 539 ~~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~ 582 (623)
. .....+.++..+ ...|+. .||.+|||++|+++.
T Consensus 232 -----~-~p~~~s~~~~~l---i~~~L~-~dP~~R~t~~eil~h 265 (328)
T 3fe3_A 232 -----R-IPFYMSTDCENL---LKRFLV-LNPIKRGTLEQIMKD 265 (328)
T ss_dssp -----C-CCTTSCHHHHHH---HHHHCC-SSTTTSCCHHHHTTC
T ss_pred -----C-CCCCCCHHHHHH---HHHHCC-CChhHCcCHHHHhcC
Confidence 0 011123344443 445655 999999999998763
No 49
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=100.00 E-value=9e-40 Score=353.49 Aligned_cols=253 Identities=25% Similarity=0.407 Sum_probs=202.5
Q ss_pred hccCcccceeeccCccEEEEEEeCCCcEEEEEEeccccccHHHHHHHHHHhCCCCCCCCcceeEEEEeCC-eeeEEEecC
Q 006982 304 TNSFSKNNIIGSGRTGTMYKALLEDGTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGFCMAKK-ERLLVYKHM 382 (623)
Q Consensus 304 ~~~f~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-~~~lV~e~~ 382 (623)
.++|...+.||+|+||.||+|.+. ++.||||+++... ..+.|.+|++++.+++||||+++++++.+.. ..++||||+
T Consensus 192 ~~~~~~~~~lG~G~fg~V~~~~~~-~~~vavK~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv~e~~ 269 (450)
T 1k9a_A 192 MKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA-TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYM 269 (450)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEET-TEEEEEEEESSCT-TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEEEECC
T ss_pred hHHeEEEeeecCcCCeeEEEEEec-CCeEEEEEeCCch-HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEEEEec
Confidence 356888899999999999999986 7899999997654 4567999999999999999999999987765 689999999
Q ss_pred CCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCCCCC
Q 006982 383 PNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDT 462 (623)
Q Consensus 383 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~~~~ 462 (623)
++|+|.+++.... ...+++..++.++.|++.||+|||+. +|+||||||+|||+++++.+||+|||+++......
T Consensus 270 ~~g~L~~~l~~~~--~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~- 343 (450)
T 1k9a_A 270 AKGSLVDYLRSRG--RSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ- 343 (450)
T ss_dssp TTCBHHHHHHHHC--TTTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTSCEEECCCTTCEECC----
T ss_pred CCCcHHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHhhEEECCCCCEEEeeCCCcccccccc-
Confidence 9999999997432 23478999999999999999999999 99999999999999999999999999998643211
Q ss_pred cccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCcccccccHHHHHHHHhccCchhhhh
Q 006982 463 HLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVT-GERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAI 541 (623)
Q Consensus 463 ~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~ellt-g~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 541 (623)
....+++.|+|||.+.+..++.++|||||||++|||+| |+.||...... .....+.. ...+
T Consensus 344 ------~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~-----~~~~~i~~---~~~~---- 405 (450)
T 1k9a_A 344 ------DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLK-----DVVPRVEK---GYKM---- 405 (450)
T ss_dssp ---------CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTT-----THHHHHHT---TCCC----
T ss_pred ------cCCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHH-----HHHHHHHc---CCCC----
Confidence 11236789999999999999999999999999999998 99999754322 11111111 1000
Q ss_pred chhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHhhcc
Q 006982 542 DKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAIGER 589 (623)
Q Consensus 542 d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~L~~i~~~ 589 (623)
-.....++++.+ ++..|+. .||++|||+.++++.|+++...
T Consensus 406 ---~~p~~~~~~l~~---li~~cl~-~dp~~Rpt~~~l~~~L~~i~~~ 446 (450)
T 1k9a_A 406 ---DAPDGCPPAVYD---VMKNCWH-LDAATRPTFLQLREQLEHIRTH 446 (450)
T ss_dssp ---CCCTTCCHHHHH---HHHHHTC-SSGGGSCCHHHHHHHHHHHHHT
T ss_pred ---CCCCcCCHHHHH---HHHHHcC-CChhHCcCHHHHHHHHHHHHHh
Confidence 011123444444 4456776 9999999999999999998653
No 50
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=100.00 E-value=1.3e-40 Score=350.45 Aligned_cols=262 Identities=23% Similarity=0.349 Sum_probs=203.2
Q ss_pred ccCcccceeeccCccEEEEEEeC------CCcEEEEEEeccc--cccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeee
Q 006982 305 NSFSKNNIIGSGRTGTMYKALLE------DGTSLMVKRLQDS--QRSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERL 376 (623)
Q Consensus 305 ~~f~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 376 (623)
++|...+.||+|+||.||+|.+. ++..||+|++... ......+.+|+.++.+++||||+++++++.+....+
T Consensus 71 ~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~ 150 (367)
T 3l9p_A 71 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRF 150 (367)
T ss_dssp GGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCE
T ss_pred hHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCE
Confidence 56888899999999999999853 4668999999653 234557889999999999999999999999999999
Q ss_pred EEEecCCCCCHhhhccCCCC---CCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCC---CeEEee
Q 006982 377 LVYKHMPNGSLYDLLHPADD---TGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDF---EPKISD 450 (623)
Q Consensus 377 lV~e~~~~gsL~~~l~~~~~---~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~---~~kl~D 450 (623)
+||||+++|+|.+++..... ....+++..++.++.|++.||+|||+. +|+||||||+|||++.++ .+||+|
T Consensus 151 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~~~~kL~D 227 (367)
T 3l9p_A 151 ILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGD 227 (367)
T ss_dssp EEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCEEECC
T ss_pred EEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChhhEEEecCCCCceEEECC
Confidence 99999999999999965332 224689999999999999999999999 999999999999999554 599999
Q ss_pred cccccccCCCCCcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCcccccccHHHHHH
Q 006982 451 FGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVT-GERPTNVAKAPETFKGNLVEWIA 529 (623)
Q Consensus 451 fgla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~ellt-g~~P~~~~~~~~~~~~~l~~~~~ 529 (623)
||+++......... ......+|+.|+|||++.+..++.++|||||||++|||++ |..||..... .+...
T Consensus 228 FG~a~~~~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~~--------~~~~~ 297 (367)
T 3l9p_A 228 FGMARDIYRAGYYR--KGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN--------QEVLE 297 (367)
T ss_dssp CHHHHHHHHHSSCT--TCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCH--------HHHHH
T ss_pred Cccccccccccccc--cCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCH--------HHHHH
Confidence 99998653211111 1112237889999999998899999999999999999998 9999975321 11111
Q ss_pred HHhccCchhhhhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHhhccc
Q 006982 530 QLSSTGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAIGERY 590 (623)
Q Consensus 530 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~L~~i~~~~ 590 (623)
........ . .....+++ +.+++..|+. .||++|||+.||++.|+.+.+..
T Consensus 298 ~i~~~~~~-~------~~~~~~~~---l~~li~~~l~-~dP~~Rps~~eil~~l~~~~~~~ 347 (367)
T 3l9p_A 298 FVTSGGRM-D------PPKNCPGP---VYRIMTQCWQ-HQPEDRPNFAIILERIEYCTQDP 347 (367)
T ss_dssp HHHTTCCC-C------CCTTCCHH---HHHHHHHHTC-SSGGGSCCHHHHHHHHHHHHHCH
T ss_pred HHHcCCCC-C------CCccCCHH---HHHHHHHHcC-CCHhHCcCHHHHHHHHHHHhhCh
Confidence 11111000 0 01112333 4455567777 99999999999999999886644
No 51
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=100.00 E-value=9.2e-40 Score=337.80 Aligned_cols=267 Identities=20% Similarity=0.346 Sum_probs=191.0
Q ss_pred hccCcccceeeccCccEEEEEEeCCC----cEEEEEEeccc---cccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCee-
Q 006982 304 TNSFSKNNIIGSGRTGTMYKALLEDG----TSLMVKRLQDS---QRSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKER- 375 (623)
Q Consensus 304 ~~~f~~~~~lG~G~~g~Vy~~~~~~~----~~vavK~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~- 375 (623)
.++|...+.||+|+||.||+|..... ..||+|++... ....+.+.+|++++++++||||+++++++......
T Consensus 22 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 101 (323)
T 3qup_A 22 EQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAKG 101 (323)
T ss_dssp ---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC----
T ss_pred hhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeecccccc
Confidence 46789999999999999999996543 27999999754 23456789999999999999999999999887655
Q ss_pred -----eEEEecCCCCCHhhhccCCC--CCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEE
Q 006982 376 -----LLVYKHMPNGSLYDLLHPAD--DTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKI 448 (623)
Q Consensus 376 -----~lV~e~~~~gsL~~~l~~~~--~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl 448 (623)
++|+||+++|+|.+++.... .....+++..++.++.|++.||+|||+. +|+||||||+||++++++.+||
T Consensus 102 ~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~---~ivH~Dikp~NIli~~~~~~kl 178 (323)
T 3qup_A 102 RLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSR---NFIHRDLAARNCMLAEDMTVCV 178 (323)
T ss_dssp ---CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTSCEEE
T ss_pred CCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcC---CcccCCCCcceEEEcCCCCEEE
Confidence 89999999999999985432 1223689999999999999999999999 9999999999999999999999
Q ss_pred eecccccccCCCCCcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCcccccccHHHH
Q 006982 449 SDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVT-GERPTNVAKAPETFKGNLVEW 527 (623)
Q Consensus 449 ~Dfgla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~ellt-g~~P~~~~~~~~~~~~~l~~~ 527 (623)
+|||+++......... ......+++.|+|||.+.+..++.++||||||+++|||++ |..||...... .....
T Consensus 179 ~Dfg~a~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~-----~~~~~ 251 (323)
T 3qup_A 179 ADFGLSRKIYSGDYYR--QGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENA-----EIYNY 251 (323)
T ss_dssp CCCCC-------------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGG-----GHHHH
T ss_pred eecccccccccccccc--ccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccChH-----HHHHH
Confidence 9999998764432211 1122346789999999999999999999999999999999 89998754322 11111
Q ss_pred HHHHhccCchhhhhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHhhcccCCCC
Q 006982 528 IAQLSSTGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAIGERYHFTT 594 (623)
Q Consensus 528 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~L~~i~~~~~~~~ 594 (623)
+. ..... . ......++ +..++..|+. .||++|||+.++++.|+++........
T Consensus 252 ~~---~~~~~------~-~~~~~~~~---l~~li~~~l~-~dp~~Rps~~~l~~~l~~~l~~~~~~~ 304 (323)
T 3qup_A 252 LI---GGNRL------K-QPPECMEE---VYDLMYQCWS-ADPKQRPSFTCLRMELENILGHLSVLS 304 (323)
T ss_dssp HH---TTCCC------C-CCTTCCHH---HHHHHHHTTC-SSGGGSCCHHHHHHHHHHHHHC-----
T ss_pred Hh---cCCCC------C-CCCccCHH---HHHHHHHHcc-CChhhCcCHHHHHHHHHHHHHHhhhcC
Confidence 11 10000 0 00112233 4455566776 999999999999999999877654443
No 52
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=100.00 E-value=4.2e-39 Score=330.60 Aligned_cols=261 Identities=27% Similarity=0.428 Sum_probs=197.8
Q ss_pred ccCcccceeeccCccEEEEEEeCCCcEEEEEEecccc---ccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEEec
Q 006982 305 NSFSKNNIIGSGRTGTMYKALLEDGTSLMVKRLQDSQ---RSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKH 381 (623)
Q Consensus 305 ~~f~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 381 (623)
++|...+.||+|+||.||+|.... .+++|+++... ...+.+.+|++++.+++||||+++++++. .+..++|+||
T Consensus 36 ~~~~~~~~lG~G~~g~Vy~~~~~~--~~avk~~k~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-~~~~~lv~e~ 112 (307)
T 3lb7_A 36 SEVMLSTRIGSGSFGTVYKGKWHG--DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMT-KDNLAIVTQW 112 (307)
T ss_dssp TSCCEEEEEEECSSCEEEEEESSS--EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEEEC
T ss_pred cceEEEeEecCCCCeEEEEEEECC--EEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEc-cCcEEEEEec
Confidence 578889999999999999998753 58888876532 33467899999999999999999999865 4568899999
Q ss_pred CCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCCCC
Q 006982 382 MPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPID 461 (623)
Q Consensus 382 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~~~ 461 (623)
+++|+|.+++... ...+++.+++.++.|++.||+|||+. +|+||||||+|||+++++.+||+|||+++......
T Consensus 113 ~~~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~DFg~a~~~~~~~ 186 (307)
T 3lb7_A 113 CEGSSLYKHLHVQ---ETKFQMFQLIDIARQTAQGMDYLHAK---NIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWS 186 (307)
T ss_dssp CSSCBHHHHHHTS---CCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCSSSEEECTTSCEEECCCCSSCC-----
T ss_pred CCCCcHHHHHHhc---ccCCCHHHHHHHHHHHHHHHHHHHhC---CEeeCCCChhhEEEcCCCCEEEccCCCceeccccc
Confidence 9999999999643 35689999999999999999999999 99999999999999999999999999998654211
Q ss_pred CcccccccCCCCcccccCccccc---CCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCcccccccHHHHHHHHhccCchh
Q 006982 462 THLSTFVNGEFGDLGYVAPEYAR---TLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQ 538 (623)
Q Consensus 462 ~~~~~~~~~~~gt~~y~aPE~~~---~~~~s~k~DV~sfGvil~elltg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 538 (623)
. ........||+.|+|||++. ...++.++||||||+++|||++|+.||......+ .....+........+.
T Consensus 187 ~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~elltg~~Pf~~~~~~~----~~~~~~~~~~~~~~~~ 260 (307)
T 3lb7_A 187 G--SQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRD----QIIFMVGRGYASPDLS 260 (307)
T ss_dssp ---------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHH----HHHHHHHHTCCCCCST
T ss_pred c--cccccCCCCCcceECcceeeccCCCCCCchhhHHHHHHHHHHHHhCCCCCccCCcHH----HHHHHHhcCCCCcchh
Confidence 1 11122345899999999986 5678899999999999999999999997543321 1111111111111111
Q ss_pred hhhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHhhccc
Q 006982 539 DAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAIGERY 590 (623)
Q Consensus 539 ~~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~L~~i~~~~ 590 (623)
.+. ...+++ +.+++..|+. .+|++||++.|+++.|+.+....
T Consensus 261 ~~~------~~~~~~---l~~li~~~l~-~~p~~RPs~~~il~~l~~l~~~~ 302 (307)
T 3lb7_A 261 KLY------KNCPKA---MKRLVADCVK-KVKEERPLFPQILSSIELLQHSL 302 (307)
T ss_dssp TSC------SSSCHH---HHHHHHHHSC-SSSTTSCCHHHHHHHHHHHHTTC
T ss_pred hhh------cCCcHH---HHHHHHHHhh-CChhhCcCHHHHHHHHHHHHhhc
Confidence 111 112333 4444556776 99999999999999999987654
No 53
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=100.00 E-value=2.3e-39 Score=330.49 Aligned_cols=261 Identities=21% Similarity=0.289 Sum_probs=200.8
Q ss_pred ccCcccceeeccCccEEEEEEeC-CCcEEEEEEecccc----ccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEE
Q 006982 305 NSFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQ----RSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVY 379 (623)
Q Consensus 305 ~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 379 (623)
++|...+.||+|+||.||+|... ++..||+|++.... ...+.+.+|++++.+++||||+++++++.+.+..++||
T Consensus 11 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 90 (294)
T 4eqm_A 11 ERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLVM 90 (294)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEEEE
T ss_pred ccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEEEE
Confidence 56888999999999999999954 68999999985432 33467899999999999999999999999999999999
Q ss_pred ecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCC
Q 006982 380 KHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNP 459 (623)
Q Consensus 380 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~ 459 (623)
||+++|+|.+++.. ...+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 91 e~~~g~~L~~~l~~----~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 163 (294)
T 4eqm_A 91 EYIEGPTLSEYIES----HGPLSVDTAINFTNQILDGIKHAHDM---RIVHRDIKPQNILIDSNKTLKIFDFGIAKALSE 163 (294)
T ss_dssp ECCCSCBHHHHHHH----HCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCSSSTTC--
T ss_pred eCCCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEEeCCCcccccc
Confidence 99999999999963 24689999999999999999999999 999999999999999999999999999987643
Q ss_pred CCCcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCcccccccHHHHHHHHhccCchhh
Q 006982 460 IDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQD 539 (623)
Q Consensus 460 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 539 (623)
.... ......||+.|+|||.+.+..++.++||||||+++|||++|+.||...... ......... ....
T Consensus 164 ~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~--------~~~~~~~~~-~~~~ 231 (294)
T 4eqm_A 164 TSLT---QTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAV--------SIAIKHIQD-SVPN 231 (294)
T ss_dssp --------------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCHH--------HHHHHHHSS-CCCC
T ss_pred cccc---ccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChH--------HHHHHHhhc-cCCC
Confidence 2211 112235899999999999999999999999999999999999999753221 111111111 0000
Q ss_pred hhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCC-CHHHHHHHHHHhhccc
Q 006982 540 AIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERP-TMFEVYQFLRAIGERY 590 (623)
Q Consensus 540 ~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RP-s~~ev~~~L~~i~~~~ 590 (623)
.. ... ....++++ ..+...|+. .||++|| +++++.+.|+.+..+.
T Consensus 232 ~~-~~~-~~~~~~~l---~~li~~~l~-~dp~~R~~~~~~l~~~l~~~~~~~ 277 (294)
T 4eqm_A 232 VT-TDV-RKDIPQSL---SNVILRATE-KDKANRYKTIQEMKDDLSSVLHEN 277 (294)
T ss_dssp HH-HHS-CTTSCHHH---HHHHHHHSC-SSGGGSCSSHHHHHHHHHTSSSSS
T ss_pred cc-hhc-ccCCCHHH---HHHHHHHhc-CCHhHccccHHHHHHHHHHHHhhc
Confidence 00 000 11123333 444556776 9999998 9999999999876544
No 54
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.8e-39 Score=335.47 Aligned_cols=252 Identities=19% Similarity=0.266 Sum_probs=200.9
Q ss_pred hccCcccceeeccCccEEEEEEeC-CCcEEEEEEeccccccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEEecC
Q 006982 304 TNSFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKHM 382 (623)
Q Consensus 304 ~~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~ 382 (623)
.++|...+.||+|+||.||++... ++..+|+|.+.........+.+|++++.+++||||+++++++.+.+..++||||+
T Consensus 4 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~~ 83 (321)
T 1tki_A 4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEFI 83 (321)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCTHHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred hhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecCcccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEEEEeC
Confidence 357888999999999999999965 6889999999876666677899999999999999999999999999999999999
Q ss_pred CCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCC--CCCeEEeecccccccCCC
Q 006982 383 PNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDD--DFEPKISDFGLARLMNPI 460 (623)
Q Consensus 383 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~--~~~~kl~Dfgla~~~~~~ 460 (623)
++|+|.+++... ...+++..+..++.|++.||.|||+. +|+||||||+|||++. ++.+||+|||+++.....
T Consensus 84 ~g~~L~~~l~~~---~~~~~~~~~~~i~~qi~~al~~lH~~---givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~~ 157 (321)
T 1tki_A 84 SGLDIFERINTS---AFELNEREIVSYVHQVCEALQFLHSH---NIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPG 157 (321)
T ss_dssp CCCBHHHHHTSS---SCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSCCCEEECCCTTCEECCTT
T ss_pred CCCCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHHC---CCCcCCCCHHHEEEccCCCCCEEEEECCCCeECCCC
Confidence 999999999632 24689999999999999999999999 9999999999999987 789999999999877543
Q ss_pred CCcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCcccccccHHHHHHHHhccCchhhh
Q 006982 461 DTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDA 540 (623)
Q Consensus 461 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 540 (623)
... ....||+.|+|||++.+..++.++|||||||++|||++|..||..... .+...........
T Consensus 158 ~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~--------~~~~~~i~~~~~~--- 221 (321)
T 1tki_A 158 DNF-----RLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETN--------QQIIENIMNAEYT--- 221 (321)
T ss_dssp CEE-----EEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSH--------HHHHHHHHHTCCC---
T ss_pred Ccc-----ccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCH--------HHHHHHHHcCCCC---
Confidence 221 123489999999999988889999999999999999999999975322 1111111111000
Q ss_pred hchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHH
Q 006982 541 IDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQF 582 (623)
Q Consensus 541 ~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~ 582 (623)
.+... ....+++ +..++..|+. .||++|||+.|+++.
T Consensus 222 ~~~~~-~~~~s~~---~~~li~~~L~-~dp~~Rpt~~e~l~h 258 (321)
T 1tki_A 222 FDEEA-FKEISIE---AMDFVDRLLV-KERKSRMTASEALQH 258 (321)
T ss_dssp CCHHH-HTTSCHH---HHHHHHTTSC-SSGGGSCCHHHHHHS
T ss_pred CChhh-hccCCHH---HHHHHHHHcC-CChhHCcCHHHHhcC
Confidence 00000 0112233 3344556766 999999999999874
No 55
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.1e-39 Score=343.83 Aligned_cols=264 Identities=25% Similarity=0.390 Sum_probs=193.2
Q ss_pred cCcccceeeccCccEEEEEEeC--CC--cEEEEEEecccc--ccHHHHHHHHHHhCCCCCCCCcceeEEEEe-CCeeeEE
Q 006982 306 SFSKNNIIGSGRTGTMYKALLE--DG--TSLMVKRLQDSQ--RSEKEFVAEMATLGSVKNRNLVPLLGFCMA-KKERLLV 378 (623)
Q Consensus 306 ~f~~~~~lG~G~~g~Vy~~~~~--~~--~~vavK~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~-~~~~~lV 378 (623)
.|...+.||+|+||.||+|... ++ ..||+|.+.... ...+.+.+|+.++.+++||||+++++++.. .+..++|
T Consensus 90 ~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~lv 169 (373)
T 3c1x_A 90 IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVV 169 (373)
T ss_dssp EEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEEE
T ss_pred eeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEEE
Confidence 4666789999999999999863 22 368999886533 345679999999999999999999999765 4577899
Q ss_pred EecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccC
Q 006982 379 YKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMN 458 (623)
Q Consensus 379 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~ 458 (623)
|||+++|+|.+++... ...+++..++.++.|++.||+|||+. +|+||||||+|||+++++.+||+|||+++...
T Consensus 170 ~e~~~~g~L~~~l~~~---~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~ 243 (373)
T 3c1x_A 170 LPYMKHGDLRNFIRNE---THNPTVKDLIGFGLQVAKGMKFLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMY 243 (373)
T ss_dssp EECCTTCBHHHHHHCT---TCCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCC-------
T ss_pred EECCCCCCHHHHHhhc---ccCCCHHHHHHHHHHHHHHHHHHHHC---CEecCccchheEEECCCCCEEEeecccccccc
Confidence 9999999999999643 34688999999999999999999999 99999999999999999999999999998764
Q ss_pred CCCCcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCcccccccHHHHHHHHhccCch
Q 006982 459 PIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVT-GERPTNVAKAPETFKGNLVEWIAQLSSTGQL 537 (623)
Q Consensus 459 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~ellt-g~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~ 537 (623)
...........+..+|+.|+|||.+.+..++.++||||||+++|||+| |..||...... .....+... ..
T Consensus 244 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~-----~~~~~~~~~---~~- 314 (373)
T 3c1x_A 244 DKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTF-----DITVYLLQG---RR- 314 (373)
T ss_dssp --------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSS-----CHHHHHHTT---CC-
T ss_pred ccccccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHH-----HHHHHHHcC---CC-
Confidence 432221112223447889999999999999999999999999999999 66666543221 122211111 00
Q ss_pred hhhhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHhhcccCCCC
Q 006982 538 QDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAIGERYHFTT 594 (623)
Q Consensus 538 ~~~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~L~~i~~~~~~~~ 594 (623)
.......++++ .+++..|+. .||++|||+.|+++.|+++...+....
T Consensus 315 ------~~~p~~~~~~l---~~li~~cl~-~dp~~RPs~~ell~~L~~i~~~~~~~~ 361 (373)
T 3c1x_A 315 ------LLQPEYCPDPL---YEVMLKCWH-PKAEMRPSFSELVSRISAIFSTFIGEH 361 (373)
T ss_dssp ------CCCCTTCCHHH---HHHHHHHTC-SSGGGSCCHHHHHHHHHHHHHTCCSCC
T ss_pred ------CCCCCCCCHHH---HHHHHHHcC-CChhhCcCHHHHHHHHHHHHHhccccc
Confidence 00111233343 444556776 999999999999999999987765443
No 56
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=2.9e-41 Score=345.32 Aligned_cols=262 Identities=22% Similarity=0.320 Sum_probs=187.0
Q ss_pred ccCcccceeeccCccEEEEEEeCCCcEEEEEEeccccccHHHHHHHHHHhCC--CCCCCCcceeEEEEeCC----eeeEE
Q 006982 305 NSFSKNNIIGSGRTGTMYKALLEDGTSLMVKRLQDSQRSEKEFVAEMATLGS--VKNRNLVPLLGFCMAKK----ERLLV 378 (623)
Q Consensus 305 ~~f~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~--l~h~niv~l~~~~~~~~----~~~lV 378 (623)
++|...+.||+|+||.||+|+.. ++.||+|++... ....+..|.+++.. ++||||+++++++.... ..++|
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~--~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv 79 (303)
T 3gxj_A 3 RTIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSR--EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLV 79 (303)
T ss_dssp GGCCCCEEEEECSSSEEEEC-CT-TSCEEEEECC-T--THHHHHHHHHHHTSTTCCC-CBCCEEEEEEEECSSSEEEEEE
T ss_pred ceeeehhhccCCCCeEEEEEEEc-CcceEEEEeccc--chhhHHHHHHHHHHHhccCcceeeeeeecccCCCccceeEEE
Confidence 57889999999999999999875 889999998654 34566677777776 79999999999998876 67999
Q ss_pred EecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHH--------hcCCCCcEecCCCCCceeeCCCCCeEEee
Q 006982 379 YKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLH--------HNCNPRIIHRNISSKCILLDDDFEPKISD 450 (623)
Q Consensus 379 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH--------~~~~~~i~H~dlk~~NILl~~~~~~kl~D 450 (623)
|||+++|+|.+++.. ..+++..++.++.|++.||+||| +. +|+||||||+|||++.++.+||+|
T Consensus 80 ~e~~~~g~L~~~l~~-----~~~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~Nil~~~~~~~kl~D 151 (303)
T 3gxj_A 80 SDYHEHGSLFDYLNR-----YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKP---AIAHRDLKSKNILVKKNGTCCIAD 151 (303)
T ss_dssp EECCTTCCHHHHHHH-----CCBCC-CHHHHC-CHHHHHC-CCCCBCSTTCBC----CCCSCCCGGGC-CCTTCCC-BCC
T ss_pred EeccCCCCHHHHHhc-----cCcchHHHHHHHHHHHHHHHHHHHHHhhhccCC---CEeeCcCCHHHeEECCCCCEEEee
Confidence 999999999999953 35788899999999999999999 66 999999999999999999999999
Q ss_pred cccccccCCCCCcccccccCCCCcccccCcccccCC------CCCcchhHHHHHHHHHHHHhC----------CCCCCCC
Q 006982 451 FGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTL------VATPKGDVYSFGTVLLELVTG----------ERPTNVA 514 (623)
Q Consensus 451 fgla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~------~~s~k~DV~sfGvil~elltg----------~~P~~~~ 514 (623)
||+++.................||+.|+|||++.+. .++.++|||||||++|||++| ..||...
T Consensus 152 Fg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~p~~~~ 231 (303)
T 3gxj_A 152 LGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDL 231 (303)
T ss_dssp CCC-CCEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHC-CCCC-CTGGGBCBTTBC-CCCCTTTTT
T ss_pred cCcceeccCCCcccccccCCCCcCccccCHhhhcCcccccccccCcchhHHHHHHHHHHHHhcCCCccccceeecccccc
Confidence 999987654333222222334589999999998765 445689999999999999999 5565443
Q ss_pred CCcccccccHHHHHHHHhccCchhhhhchhhhcCC-----CHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHhhcc
Q 006982 515 KAPETFKGNLVEWIAQLSSTGQLQDAIDKCLVAKG-----VDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAIGER 589 (623)
Q Consensus 515 ~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~-----~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~L~~i~~~ 589 (623)
............. +.+..+.... ..+....+.+++..|+. .||++|||++||++.|+++.++
T Consensus 232 ~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~-~dP~~Rps~~~i~~~L~~l~~~ 298 (303)
T 3gxj_A 232 VPSDPSVEEMRKV------------VCEQKLRPNIPNRWQSCEALRVMAKIMRECWY-ANGAARLTALRIKKTLSQLSQQ 298 (303)
T ss_dssp CC-CCCCC-CHHH------------HTTSCCCCCCCGGGGSSHHHHHHHHHHHTTCC-SSGGGSCCHHHHHHHHHC-CCC
T ss_pred CCCCccHHHHHHH------------HHHhhcCCCccccccchhhHHHHHHHHHHHhc-cCcccCCCHHHHHHHHHHhhhh
Confidence 2211111111111 1111111111 12444567777778887 9999999999999999998775
Q ss_pred c
Q 006982 590 Y 590 (623)
Q Consensus 590 ~ 590 (623)
.
T Consensus 299 ~ 299 (303)
T 3gxj_A 299 E 299 (303)
T ss_dssp -
T ss_pred c
Confidence 4
No 57
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=100.00 E-value=5.8e-40 Score=333.42 Aligned_cols=260 Identities=24% Similarity=0.390 Sum_probs=209.9
Q ss_pred hccCcccceeeccCccEEEEEEeC-CCcEEEEEEeccccccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEEecC
Q 006982 304 TNSFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKHM 382 (623)
Q Consensus 304 ~~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~ 382 (623)
.++|...+.||+|+||.||+|... ++..||+|.+.......+.+.+|++++++++||||+++++++.+....++||||+
T Consensus 12 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~ 91 (288)
T 3kfa_A 12 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFM 91 (288)
T ss_dssp GGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSCSTHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEECC
T ss_pred ccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEEEEEEcC
Confidence 467888899999999999999976 4888999999877767788999999999999999999999999999999999999
Q ss_pred CCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCCCCC
Q 006982 383 PNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDT 462 (623)
Q Consensus 383 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~~~~ 462 (623)
++|+|.+++.... ...+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++........
T Consensus 92 ~~~~L~~~~~~~~--~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~ 166 (288)
T 3kfa_A 92 TYGNLLDYLRECN--RQEVSAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTY 166 (288)
T ss_dssp TTEEHHHHHHHCC--TTTSCHHHHHHHHHHHHHHHHHHHHH---TCCCSCCSGGGEEECGGGCEEECCCCGGGTSCSSSS
T ss_pred CCCcHHHHHHhcc--cCCccHhHHHHHHHHHHHHHHHHHHC---CccCCCCCcceEEEcCCCCEEEccCccceeccCCcc
Confidence 9999999996532 35689999999999999999999999 999999999999999999999999999987654322
Q ss_pred cccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCcccccccHHHHHHHHhccCchhhhh
Q 006982 463 HLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVT-GERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAI 541 (623)
Q Consensus 463 ~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~ellt-g~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 541 (623)
. ......+|+.|+|||.+.+..++.++||||||+++|||++ |..||...... .....+......
T Consensus 167 ~---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~-----~~~~~~~~~~~~------- 231 (288)
T 3kfa_A 167 T---AHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS-----QVYELLEKDYRM------- 231 (288)
T ss_dssp E---EETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGG-----GHHHHHHTTCCC-------
T ss_pred c---cccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH-----HHHHHHhccCCC-------
Confidence 1 1222346788999999998899999999999999999999 99998753221 111111111000
Q ss_pred chhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHhhccc
Q 006982 542 DKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAIGERY 590 (623)
Q Consensus 542 d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~L~~i~~~~ 590 (623)
. .....++++ .+++..|+. .||++|||+.|+++.|+++.++.
T Consensus 232 --~-~~~~~~~~l---~~li~~~l~-~dp~~Rps~~~~~~~l~~~~~~~ 273 (288)
T 3kfa_A 232 --E-RPEGCPEKV---YELMRACWQ-WNPSDRPSFAEIHQAFETMFQES 273 (288)
T ss_dssp --C-CCTTCCHHH---HHHHHHHTC-SSGGGSCCHHHHHHHHHHHHHHH
T ss_pred --C-CCCCCCHHH---HHHHHHHhC-CChhhCcCHHHHHHHHHHHHHhc
Confidence 0 011223344 444456766 99999999999999999876654
No 58
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=100.00 E-value=3.6e-39 Score=332.85 Aligned_cols=274 Identities=20% Similarity=0.285 Sum_probs=206.0
Q ss_pred ccCcccceeeccCccEEEEEEeC-CCcEEEEEEecccc--ccHHHHHHHHHHhCCCCCCCCcceeEEEEeCC--eeeEEE
Q 006982 305 NSFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQ--RSEKEFVAEMATLGSVKNRNLVPLLGFCMAKK--ERLLVY 379 (623)
Q Consensus 305 ~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~--~~~lV~ 379 (623)
++|...+.||+|+||.||+|... +++.||+|++.... ...+.+.+|++++.+++||||+++++++.... ..++||
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~ 88 (319)
T 4euu_A 9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIM 88 (319)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEE
T ss_pred CCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEEEE
Confidence 56888999999999999999976 58999999997543 44677889999999999999999999998765 678999
Q ss_pred ecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceee----CCCCCeEEeeccccc
Q 006982 380 KHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILL----DDDFEPKISDFGLAR 455 (623)
Q Consensus 380 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl----~~~~~~kl~Dfgla~ 455 (623)
||+++|+|.+++..... ...+++..++.++.|++.||+|||+. +|+||||||+||++ +.++.+||+|||+++
T Consensus 89 e~~~~~~L~~~l~~~~~-~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~ 164 (319)
T 4euu_A 89 EFCPCGSLYTVLEEPSN-AYGLPESEFLIVLRDVVGGMNHLREN---GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAR 164 (319)
T ss_dssp ECCTTCBHHHHHHSGGG-TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEECTTSCEEEEECCCTTCE
T ss_pred eCCCCCCHHHHHHHhcc-ccCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEEeccCCCCceEEEccCCCce
Confidence 99999999999975432 23489999999999999999999999 99999999999999 888889999999998
Q ss_pred ccCCCCCcccccccCCCCcccccCccccc--------CCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCcccccccHHHH
Q 006982 456 LMNPIDTHLSTFVNGEFGDLGYVAPEYAR--------TLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEW 527 (623)
Q Consensus 456 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~--------~~~~s~k~DV~sfGvil~elltg~~P~~~~~~~~~~~~~l~~~ 527 (623)
........ ....||+.|+|||++. +..++.++|||||||++|||++|+.||............+...
T Consensus 165 ~~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~ 239 (319)
T 4euu_A 165 ELEDDEQF-----VSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKI 239 (319)
T ss_dssp ECCTTCCB-----CCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGGCHHHHHHH
T ss_pred ecCCCCce-----eecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccchhHHHHHHH
Confidence 76543221 2235899999999886 5678999999999999999999999997544433222222222
Q ss_pred HHHHhcc--Cchhhhhchhh------h-cCCCHHHHHH-HHHHHhhccCCCCCCCCCCHHHHHHHHHHhhc
Q 006982 528 IAQLSST--GQLQDAIDKCL------V-AKGVDNELFQ-FLKVACNCVLPTIPKERPTMFEVYQFLRAIGE 588 (623)
Q Consensus 528 ~~~~~~~--~~~~~~~d~~l------~-~~~~~~~~~~-~~~~~~~C~~~~~P~~RPs~~ev~~~L~~i~~ 588 (623)
....... ..+......++ . .......+.. +..+...|+. .||++|||++|+++...+...
T Consensus 240 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~-~dP~~R~s~~ell~h~~d~~~ 309 (319)
T 4euu_A 240 ITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILE-ADQEKCWGFDQFFAETSDILH 309 (319)
T ss_dssp HHHCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSC-CCTTTSCCHHHHHHHHHHHTC
T ss_pred hcCCCcccchhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhcc-CChhhhccHHHhhhccHHHhh
Confidence 2211100 00001011110 0 0112233333 3344445555 999999999999999987543
No 59
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=100.00 E-value=1.2e-39 Score=337.23 Aligned_cols=252 Identities=23% Similarity=0.341 Sum_probs=196.4
Q ss_pred ccCcccceeeccCccEEEEEEeC-CCcEEEEEEecccc--ccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEEec
Q 006982 305 NSFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQ--RSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKH 381 (623)
Q Consensus 305 ~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 381 (623)
++|...+.||+|+||.||+|... +++.||+|++.... ...+.+.+|+.++.+++||||+++++++.+.+..++||||
T Consensus 7 ~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~ 86 (323)
T 3tki_A 7 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEY 86 (323)
T ss_dssp TCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred hhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEEc
Confidence 57888999999999999999965 78999999986443 2345688999999999999999999999999999999999
Q ss_pred CCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCCCC
Q 006982 382 MPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPID 461 (623)
Q Consensus 382 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~~~ 461 (623)
+++|+|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++......
T Consensus 87 ~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 159 (323)
T 3tki_A 87 CSGGELFDRIEP----DIGMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFRYNN 159 (323)
T ss_dssp CTTEEGGGGSBT----TTBCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEECEETT
T ss_pred CCCCcHHHHHhh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CccccccchHHEEEeCCCCEEEEEeeccceeccCC
Confidence 999999999963 35689999999999999999999999 99999999999999999999999999998654221
Q ss_pred CcccccccCCCCcccccCcccccCCCC-CcchhHHHHHHHHHHHHhCCCCCCCCCCcccccccHHHHHHHHhccCchhhh
Q 006982 462 THLSTFVNGEFGDLGYVAPEYARTLVA-TPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDA 540 (623)
Q Consensus 462 ~~~~~~~~~~~gt~~y~aPE~~~~~~~-s~k~DV~sfGvil~elltg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 540 (623)
. ........||+.|+|||++.+..+ +.++|||||||++|||++|+.||....... .....|.......
T Consensus 160 ~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~---~~~~~~~~~~~~~------ 228 (323)
T 3tki_A 160 R--ERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSC---QEYSDWKEKKTYL------ 228 (323)
T ss_dssp E--ECCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTS---HHHHHHHTTCTTS------
T ss_pred c--ccccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHH---HHHHHHhcccccC------
Confidence 1 112234468999999999987765 779999999999999999999997543321 1111221110000
Q ss_pred hchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHH
Q 006982 541 IDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQF 582 (623)
Q Consensus 541 ~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~ 582 (623)
.+ .....+++ ..++..|+. .||++|||+.|+++.
T Consensus 229 -~~---~~~~~~~~---~~li~~~L~-~dP~~R~t~~eil~h 262 (323)
T 3tki_A 229 -NP---WKKIDSAP---LALLHKILV-ENPSARITIPDIKKD 262 (323)
T ss_dssp -TT---GGGSCHHH---HHHHHHHSC-SSTTTSCCHHHHTTC
T ss_pred -Cc---cccCCHHH---HHHHHHHcc-CChhhCcCHHHHhhC
Confidence 00 01122333 344556666 999999999998764
No 60
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=100.00 E-value=1.5e-39 Score=326.90 Aligned_cols=252 Identities=25% Similarity=0.428 Sum_probs=198.8
Q ss_pred ccCcccceeeccCccEEEEEEeCCCcEEEEEEecccc---ccHHHHHHHHHHhCCCCCCCCcceeEEEEeC--CeeeEEE
Q 006982 305 NSFSKNNIIGSGRTGTMYKALLEDGTSLMVKRLQDSQ---RSEKEFVAEMATLGSVKNRNLVPLLGFCMAK--KERLLVY 379 (623)
Q Consensus 305 ~~f~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~~lV~ 379 (623)
++|...+.||+|+||.||+|+.. ++.||+|++.... ...+.+.+|++++.+++||||+++++++.+. ...++||
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~-~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~ 88 (271)
T 3kmu_A 10 KQLNFLTKLNENHSGELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLIT 88 (271)
T ss_dssp GGCEEEEEEEEETTEEEEEEEET-TEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEEEE
T ss_pred HHhHHHHHhcCCCcceEEEEEEC-CeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEeee
Confidence 56888999999999999999985 8899999997543 3346789999999999999999999999887 6779999
Q ss_pred ecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCC--cEecCCCCCceeeCCCCCeEEeeccccccc
Q 006982 380 KHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPR--IIHRNISSKCILLDDDFEPKISDFGLARLM 457 (623)
Q Consensus 380 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~--i~H~dlk~~NILl~~~~~~kl~Dfgla~~~ 457 (623)
||+++|+|.+++.... ...+++..++.++.|++.||+|||+. + |+||||||+||++++++.++|+|||++...
T Consensus 89 e~~~~~~L~~~l~~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~---~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~~ 163 (271)
T 3kmu_A 89 HWMPYGSLYNVLHEGT--NFVVDQSQAVKFALDMARGMAFLHTL---EPLIPRHALNSRSVMIDEDMTARISMADVKFSF 163 (271)
T ss_dssp ECCTTCBHHHHHHSCS--SCCCCHHHHHHHHHHHHHHHHHHTTS---SSCCTTCCCSGGGEEECTTSCEEEEGGGSCCTT
T ss_pred cccCCCcHHHHHhhcc--cCCCCHHHHHHHHHHHHHHHHHHhcC---CCceecCCCccceEEEcCCcceeEEeccceeee
Confidence 9999999999997532 24689999999999999999999998 7 999999999999999999999999987653
Q ss_pred CCCCCcccccccCCCCcccccCcccccCCCCCc---chhHHHHHHHHHHHHhCCCCCCCCCCcccccccHHHHHHHHhcc
Q 006982 458 NPIDTHLSTFVNGEFGDLGYVAPEYARTLVATP---KGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSST 534 (623)
Q Consensus 458 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~---k~DV~sfGvil~elltg~~P~~~~~~~~~~~~~l~~~~~~~~~~ 534 (623)
.. ....||+.|+|||.+.+..++. ++||||||+++|||++|+.||...... .........
T Consensus 164 ~~---------~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~--------~~~~~~~~~ 226 (271)
T 3kmu_A 164 QS---------PGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNM--------EIGMKVALE 226 (271)
T ss_dssp SC---------TTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCHH--------HHHHHHHHS
T ss_pred cc---------cCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccChH--------HHHHHHHhc
Confidence 22 1234789999999998765444 899999999999999999999753221 111111111
Q ss_pred CchhhhhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHhhcc
Q 006982 535 GQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAIGER 589 (623)
Q Consensus 535 ~~~~~~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~L~~i~~~ 589 (623)
.. .+.+ ....++++. .++..|+. .||++|||++|+++.|+++.++
T Consensus 227 ~~-----~~~~-~~~~~~~~~---~li~~~l~-~~p~~Rps~~~il~~L~~l~~~ 271 (271)
T 3kmu_A 227 GL-----RPTI-PPGISPHVS---KLMKICMN-EDPAKRPKFDMIVPILEKMQDK 271 (271)
T ss_dssp CC-----CCCC-CTTCCHHHH---HHHHHHTC-SSGGGSCCHHHHHHHHHHHCC-
T ss_pred CC-----CCCC-CCCCCHHHH---HHHHHHcC-CChhhCcCHHHHHHHHHHhhcC
Confidence 00 0000 112334444 44445766 9999999999999999998753
No 61
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=100.00 E-value=7.4e-40 Score=329.59 Aligned_cols=252 Identities=27% Similarity=0.418 Sum_probs=189.2
Q ss_pred ccCcccceeeccCccEEEEEEeCCCcEEEEEEecccc-----ccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEE
Q 006982 305 NSFSKNNIIGSGRTGTMYKALLEDGTSLMVKRLQDSQ-----RSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVY 379 (623)
Q Consensus 305 ~~f~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~-----~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 379 (623)
++|...+.||+|+||.||+|... +..||+|++.... ...+.+.+|++++.+++||||+++++++.+.+..++||
T Consensus 7 ~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 85 (271)
T 3dtc_A 7 AELTLEEIIGIGGFGKVYRAFWI-GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLVM 85 (271)
T ss_dssp TSEEEEEEEEEETTEEEEEEEET-TEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEEEE
T ss_pred hheeeeeeeccCCCeEEEEEEEc-CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEEE
Confidence 56888899999999999999985 8899999986542 23467889999999999999999999999999999999
Q ss_pred ecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCC--------CCCeEEeec
Q 006982 380 KHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDD--------DFEPKISDF 451 (623)
Q Consensus 380 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~--------~~~~kl~Df 451 (623)
||+++++|.+++. ...+++..++.++.|++.||+|||+....+|+||||||+||+++. ++.+||+||
T Consensus 86 e~~~~~~L~~~~~-----~~~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~Df 160 (271)
T 3dtc_A 86 EFARGGPLNRVLS-----GKRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDF 160 (271)
T ss_dssp ECCTTEEHHHHHT-----SSCCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECCC
T ss_pred EcCCCCCHHHHhh-----cCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCcceEEccC
Confidence 9999999999994 346899999999999999999999992222999999999999986 778999999
Q ss_pred ccccccCCCCCcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCcccccccHHHHHHHH
Q 006982 452 GLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQL 531 (623)
Q Consensus 452 gla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~~~~~~~~~~~l~~~~~~~ 531 (623)
|+++....... ....||+.|+|||.+.+..++.++||||||+++|||++|+.||...... ......
T Consensus 161 g~~~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~--------~~~~~~ 226 (271)
T 3dtc_A 161 GLAREWHRTTK------MSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGL--------AVAYGV 226 (271)
T ss_dssp CC-------------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCHH--------HHHHHH
T ss_pred Ccccccccccc------cCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH--------HHHHhh
Confidence 99986543221 1234899999999999888999999999999999999999999753211 111111
Q ss_pred hccCchhhhhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHh
Q 006982 532 SSTGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAI 586 (623)
Q Consensus 532 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~L~~i 586 (623)
........ .....+++ +.+++..|+. .||++|||+.|+++.|+++
T Consensus 227 ~~~~~~~~------~~~~~~~~---~~~li~~~l~-~~p~~Rps~~e~l~~L~~l 271 (271)
T 3dtc_A 227 AMNKLALP------IPSTCPEP---FAKLMEDCWN-PDPHSRPSFTNILDQLTTI 271 (271)
T ss_dssp HTSCCCCC------CCTTCCHH---HHHHHHHHTC-SSGGGSCCHHHHHHHHHC-
T ss_pred hcCCCCCC------CCcccCHH---HHHHHHHHhc-CCcccCcCHHHHHHHHhcC
Confidence 11100000 01112333 4444556776 9999999999999999864
No 62
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=2.3e-39 Score=337.68 Aligned_cols=249 Identities=18% Similarity=0.272 Sum_probs=191.3
Q ss_pred hccCcccceeeccCccEEEEEEe-CCCcEEEEEEecccc--ccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEEe
Q 006982 304 TNSFSKNNIIGSGRTGTMYKALL-EDGTSLMVKRLQDSQ--RSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYK 380 (623)
Q Consensus 304 ~~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e 380 (623)
.++|...+.||+|+||.||+|.. .+|+.||+|++.... .....+.+|++++++++||||+++++++.+.+..++|||
T Consensus 9 ~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lv~E 88 (347)
T 3zgw_A 9 LKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVLETANKIFMVLE 88 (347)
T ss_dssp TTTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESSCC---CCHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred hcCeEEEEEEEcCCCeEEEEEEECCCCCEEEEEEEEccccchHHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEEEe
Confidence 46788899999999999999995 578999999986543 223468899999999999999999999999999999999
Q ss_pred cCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCCC
Q 006982 381 HMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPI 460 (623)
Q Consensus 381 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~~ 460 (623)
|+++|+|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+|||+++++.+||+|||++......
T Consensus 89 ~~~gg~L~~~l~~----~~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~ 161 (347)
T 3zgw_A 89 YCPGGELFDYIIS----QDRLSEEETRVVFRQIVSAVAYVHSQ---GYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGN 161 (347)
T ss_dssp CCTTCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBC----
T ss_pred CCCCCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCccHHHEEEcCCCCEEEEeccCcccccCC
Confidence 9999999999853 24689999999999999999999999 9999999999999999999999999999865432
Q ss_pred CCcccccccCCCCcccccCcccccCCCC-CcchhHHHHHHHHHHHHhCCCCCCCCCCcccccccHHHHHHHHhccCchhh
Q 006982 461 DTHLSTFVNGEFGDLGYVAPEYARTLVA-TPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQD 539 (623)
Q Consensus 461 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~-s~k~DV~sfGvil~elltg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 539 (623)
.. .......||+.|+|||++.+..+ +.++||||+||++|||++|..||..... ............
T Consensus 162 ~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~--------~~~~~~i~~~~~--- 227 (347)
T 3zgw_A 162 KD---YHLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDNV--------MALYKKIMRGKY--- 227 (347)
T ss_dssp -------------CGGGCCHHHHTTC---CCHHHHHHHHHHHHHHHHSSCSSCCSSH--------HHHHHHHHHTCC---
T ss_pred CC---ccccccCCccCccCHHHHcCCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCH--------HHHHHHHHcCCC---
Confidence 21 11223458999999999988775 8999999999999999999999975321 111111111100
Q ss_pred hhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHH
Q 006982 540 AIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQF 582 (623)
Q Consensus 540 ~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~ 582 (623)
. .....+.++.. ++..|+. .||++|||++|+++.
T Consensus 228 ----~-~p~~~s~~~~~---li~~~L~-~dP~~Rps~~eil~h 261 (347)
T 3zgw_A 228 ----D-VPKWLSPSSIL---LLQQMLQ-VDPKKRISMKNLLNH 261 (347)
T ss_dssp ----C-CCTTCCHHHHH---HHHHHTC-SSGGGSCCHHHHHTC
T ss_pred ----C-CCCCCCHHHHH---HHHHHcc-cCHhHCcCHHHHhcC
Confidence 0 01112333433 4445665 999999999999875
No 63
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=100.00 E-value=8.5e-40 Score=330.70 Aligned_cols=258 Identities=28% Similarity=0.413 Sum_probs=206.2
Q ss_pred ccCcccceeeccCccEEEEEEeCCCcEEEEEEeccccccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEEecCCC
Q 006982 305 NSFSKNNIIGSGRTGTMYKALLEDGTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKHMPN 384 (623)
Q Consensus 305 ~~f~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~ 384 (623)
++|...+.||+|+||.||+|...++..||+|.+.......+.+.+|++++.+++||||+++++++. .+..++|+||+++
T Consensus 13 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~~~~ 91 (279)
T 1qpc_A 13 ETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT-QEPIYIITEYMEN 91 (279)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEEEEECCTT
T ss_pred HhhhheeeecCCCCeEEEEEEEcCCcEEEEEEecCCcccHHHHHHHHHHHHhCCCcCcceEEEEEc-CCCcEEEEecCCC
Confidence 568888999999999999999988889999999877667788999999999999999999999986 4568999999999
Q ss_pred CCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCCCCCcc
Q 006982 385 GSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHL 464 (623)
Q Consensus 385 gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~~~~~~ 464 (623)
|+|.+++.... +..+++..++.++.|++.||+|||+. +|+||||||+||++++++.+||+|||+++.......
T Consensus 92 ~~L~~~l~~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~-- 164 (279)
T 1qpc_A 92 GSLVDFLKTPS--GIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEY-- 164 (279)
T ss_dssp CBHHHHTTSHH--HHTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTTCEECSSSCE--
T ss_pred CCHHHHHhcCC--CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHhhEEEcCCCCEEECCCcccccccCccc--
Confidence 99999995321 13689999999999999999999999 999999999999999999999999999987654221
Q ss_pred cccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCcccccccHHHHHHHHhccCchhhhhch
Q 006982 465 STFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVT-GERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAIDK 543 (623)
Q Consensus 465 ~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~ellt-g~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~ 543 (623)
.......++..|+|||.+.+..++.++||||||+++|||++ |+.||...... +.......... .
T Consensus 165 -~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~--------~~~~~~~~~~~------~ 229 (279)
T 1qpc_A 165 -TAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNP--------EVIQNLERGYR------M 229 (279)
T ss_dssp -ECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHH--------HHHHHHHTTCC------C
T ss_pred -ccccCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCHH--------HHHHHHhcccC------C
Confidence 11223346789999999988889999999999999999999 89998653221 11111111100 0
Q ss_pred hhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHhhccc
Q 006982 544 CLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAIGERY 590 (623)
Q Consensus 544 ~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~L~~i~~~~ 590 (623)
......++++. +++..|+. .+|++|||++++++.|+++....
T Consensus 230 -~~~~~~~~~l~---~li~~~l~-~~p~~Rps~~~l~~~l~~~~~~~ 271 (279)
T 1qpc_A 230 -VRPDNCPEELY---QLMRLCWK-ERPEDRPTFDYLRSVLEDFFTAT 271 (279)
T ss_dssp -CCCTTCCHHHH---HHHHHHTC-SSGGGSCCHHHHHHHHHHHHHHC
T ss_pred -CCcccccHHHH---HHHHHHhc-cChhhCCCHHHHHHHHHHHHHhc
Confidence 01112334444 44556776 99999999999999999986543
No 64
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=100.00 E-value=7.2e-40 Score=340.44 Aligned_cols=280 Identities=21% Similarity=0.281 Sum_probs=200.5
Q ss_pred ccCcccceeeccCccEEEEEEeCCCcEEEEEEeccccccHHHHHHHHHHhCCCCCCCCcceeEEEEe-----CCeeeEEE
Q 006982 305 NSFSKNNIIGSGRTGTMYKALLEDGTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGFCMA-----KKERLLVY 379 (623)
Q Consensus 305 ~~f~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~-----~~~~~lV~ 379 (623)
++|...+.||+|+||.||+|+. +++.||+|++............|+..+..++||||+++++++.. ....++||
T Consensus 13 ~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~lv~ 91 (336)
T 3g2f_A 13 DNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFANRQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRMEYLLVM 91 (336)
T ss_dssp TSEEEEEEEEECSSEEEEEEEE-TTEEEEEEEEEGGGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEEEEEEE
T ss_pred HHhheeeecccCCCeEEEEEEE-CCeEEEEEEeeccchhhHHHHHHHHHHHhccCcchhhheecccccccCCCceEEEEE
Confidence 5788899999999999999987 58999999997554333334455555667899999999986643 22468999
Q ss_pred ecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcC------CCCcEecCCCCCceeeCCCCCeEEeeccc
Q 006982 380 KHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNC------NPRIIHRNISSKCILLDDDFEPKISDFGL 453 (623)
Q Consensus 380 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~------~~~i~H~dlk~~NILl~~~~~~kl~Dfgl 453 (623)
||+++|+|.+++.. ...++..++.++.|++.||+|||+.+ .++|+||||||+|||++.++.+||+|||+
T Consensus 92 e~~~~g~L~~~l~~-----~~~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kL~DFG~ 166 (336)
T 3g2f_A 92 EYYPNGSLXKYLSL-----HTSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGL 166 (336)
T ss_dssp CCCTTCBHHHHHHH-----CCBCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEECTTSCEEECCCTT
T ss_pred ecCCCCcHHHHHhh-----cccchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEEcCCCcEEEeeccc
Confidence 99999999999953 34589999999999999999999873 33899999999999999999999999999
Q ss_pred ccccCCCCCcc----cccccCCCCcccccCcccccC-------CCCCcchhHHHHHHHHHHHHhCCCCCCCCCCcccccc
Q 006982 454 ARLMNPIDTHL----STFVNGEFGDLGYVAPEYART-------LVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKG 522 (623)
Q Consensus 454 a~~~~~~~~~~----~~~~~~~~gt~~y~aPE~~~~-------~~~s~k~DV~sfGvil~elltg~~P~~~~~~~~~~~~ 522 (623)
++.+....... ........||+.|+|||++.+ ..++.++|||||||++|||++|+.||...........
T Consensus 167 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~~~ 246 (336)
T 3g2f_A 167 SMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVPEYQM 246 (336)
T ss_dssp CEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTSCCCCCCC
T ss_pred eeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCccchhHHHH
Confidence 98765322111 111223458999999999976 4567799999999999999999888754433222221
Q ss_pred cHHHH---------HHHHhccCchhhhhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHhhcccCCC
Q 006982 523 NLVEW---------IAQLSSTGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAIGERYHFT 593 (623)
Q Consensus 523 ~l~~~---------~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~L~~i~~~~~~~ 593 (623)
..... ............-+...+. ........+.+++..|+. .||++|||++|+++.|+++...+..-
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~li~~cl~-~dP~~Rps~~e~l~~L~~ll~~~~~~ 323 (336)
T 3g2f_A 247 AFQTEVGNHPTFEDMQVLVSREKQRPKFPEAWK--ENSLAVRSLKETIEDCWD-QDAEARLTAQXAEERMAELMMIWERN 323 (336)
T ss_dssp TTHHHHCSSCCHHHHHHHHTTSCCCCCCCTTCC--CCSHHHHHHHHHHHHHSC-SSGGGSCCHHHHHHHHHHHHHCCCC-
T ss_pred hhhcccCCCchHHHHHhhhcccccCCCCCcccc--cccchHHHHHHHHHHHhc-CChhhCcchHHHHHHHHHHHHHHHhc
Confidence 11110 0000000000000000000 012233456677778887 99999999999999999998877533
No 65
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=100.00 E-value=4.7e-39 Score=334.17 Aligned_cols=247 Identities=20% Similarity=0.242 Sum_probs=198.2
Q ss_pred ccCcccceeeccCccEEEEEEeC-CCcEEEEEEeccc----cccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEE
Q 006982 305 NSFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDS----QRSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVY 379 (623)
Q Consensus 305 ~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~----~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 379 (623)
++|...+.||+|+||.||+++.. +++.||+|+++.. ......+.+|++++.+++||||+++++++.+.+..++||
T Consensus 5 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~ 84 (337)
T 1o6l_A 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVM 84 (337)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEEE
Confidence 57888999999999999999965 6899999999753 234567889999999999999999999999999999999
Q ss_pred ecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCC
Q 006982 380 KHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNP 459 (623)
Q Consensus 380 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~ 459 (623)
||+++|+|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++....
T Consensus 85 E~~~gg~L~~~l~~----~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~ 157 (337)
T 1o6l_A 85 EYANGGELFFHLSR----ERVFTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGIS 157 (337)
T ss_dssp ECCTTCBHHHHHHH----HSCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCSCC
T ss_pred eCCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCcCCHHHEEECCCCCEEEeeccchhhccc
Confidence 99999999999863 24689999999999999999999999 999999999999999999999999999986433
Q ss_pred CCCcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCcccccccHHHHHHHHhccCchhh
Q 006982 460 IDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQD 539 (623)
Q Consensus 460 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 539 (623)
.... .....||+.|+|||++.+..++.++|||||||++|||++|+.||..... .......... ..
T Consensus 158 ~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~--------~~~~~~i~~~-~~-- 222 (337)
T 1o6l_A 158 DGAT----MKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH--------ERLFELILME-EI-- 222 (337)
T ss_dssp TTCC----BCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSH--------HHHHHHHHHC-CC--
T ss_pred CCCc----ccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCCH--------HHHHHHHHcC-CC--
Confidence 2221 1233589999999999999999999999999999999999999975321 1111111111 00
Q ss_pred hhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCC-----CHHHHHHH
Q 006982 540 AIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERP-----TMFEVYQF 582 (623)
Q Consensus 540 ~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RP-----s~~ev~~~ 582 (623)
.+ ....++++..++ ..|+. .||++|| +++|+++.
T Consensus 223 ----~~-p~~~s~~~~~li---~~lL~-~dP~~R~g~~~~~~~ei~~h 261 (337)
T 1o6l_A 223 ----RF-PRTLSPEAKSLL---AGLLK-KDPKQRLGGGPSDAKEVMEH 261 (337)
T ss_dssp ----CC-CTTSCHHHHHHH---HHHTC-SSTTTSTTCSTTTHHHHHTS
T ss_pred ----CC-CCCCCHHHHHHH---HHHhh-cCHHHhcCCCCCCHHHHHcC
Confidence 00 112344444444 35555 8999999 89998764
No 66
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=100.00 E-value=1.6e-39 Score=337.83 Aligned_cols=263 Identities=24% Similarity=0.380 Sum_probs=205.0
Q ss_pred hccCcccceeeccCccEEEEEEeC--------CCcEEEEEEecccc--ccHHHHHHHHHHhCCC-CCCCCcceeEEEEeC
Q 006982 304 TNSFSKNNIIGSGRTGTMYKALLE--------DGTSLMVKRLQDSQ--RSEKEFVAEMATLGSV-KNRNLVPLLGFCMAK 372 (623)
Q Consensus 304 ~~~f~~~~~lG~G~~g~Vy~~~~~--------~~~~vavK~~~~~~--~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~ 372 (623)
.++|...+.||+|+||.||+|... ++..||+|++.... .....+.+|++++.++ +||||+++++++.+.
T Consensus 34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~ 113 (334)
T 2pvf_A 34 RDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 113 (334)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred HhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEccC
Confidence 367888999999999999999863 56789999997643 3356788999999999 899999999999999
Q ss_pred CeeeEEEecCCCCCHhhhccCCCCC------------CCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceee
Q 006982 373 KERLLVYKHMPNGSLYDLLHPADDT------------GKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILL 440 (623)
Q Consensus 373 ~~~~lV~e~~~~gsL~~~l~~~~~~------------~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl 440 (623)
+..++||||+++|+|.+++...... ...+++..++.++.|++.||+|||+. +|+||||||+||++
T Consensus 114 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll 190 (334)
T 2pvf_A 114 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLV 190 (334)
T ss_dssp SCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEE
T ss_pred CceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCccceEEE
Confidence 9999999999999999999754321 23489999999999999999999999 99999999999999
Q ss_pred CCCCCeEEeecccccccCCCCCcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCccc
Q 006982 441 DDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVT-GERPTNVAKAPET 519 (623)
Q Consensus 441 ~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~ellt-g~~P~~~~~~~~~ 519 (623)
+.++.+||+|||+++......... ......+|+.|+|||++.+..++.++||||||+++|||++ |+.||.....
T Consensus 191 ~~~~~~kL~Dfg~~~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~--- 265 (334)
T 2pvf_A 191 TENNVMKIADFGLARDINNIDYYK--KTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPV--- 265 (334)
T ss_dssp CTTCCEEECCCTTCEECTTTSSEE--CCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCH---
T ss_pred cCCCCEEEcccccccccccccccc--ccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcCCH---
Confidence 999999999999998765432211 1122346789999999988889999999999999999999 9999865321
Q ss_pred ccccHHHHHHHHhccCchhhhhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHhhccc
Q 006982 520 FKGNLVEWIAQLSSTGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAIGERY 590 (623)
Q Consensus 520 ~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~L~~i~~~~ 590 (623)
.+.......... .. .......+ +.+++..|+. .+|.+|||+.|+++.|+++....
T Consensus 266 -----~~~~~~~~~~~~------~~-~~~~~~~~---l~~li~~~l~-~dp~~Rps~~ell~~L~~l~~~~ 320 (334)
T 2pvf_A 266 -----EELFKLLKEGHR------MD-KPANCTNE---LYMMMRDCWH-AVPSQRPTFKQLVEDLDRILTLT 320 (334)
T ss_dssp -----HHHHHHHHHTCC------CC-CCTTCCHH---HHHHHHHHTC-SSGGGSCCHHHHHHHHHHHHHHH
T ss_pred -----HHHHHHHhcCCC------CC-CCccCCHH---HHHHHHHHcc-CChhhCcCHHHHHHHHHHHHhcc
Confidence 111111111000 00 01112333 4445556776 99999999999999999986644
No 67
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=100.00 E-value=1.2e-38 Score=334.14 Aligned_cols=250 Identities=21% Similarity=0.313 Sum_probs=198.3
Q ss_pred hccCcccceeeccCccEEEEEEeC-CCcEEEEEEeccccc-------cHHHHHHHHHHhCCCCCCCCcceeEEEEeCCee
Q 006982 304 TNSFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQR-------SEKEFVAEMATLGSVKNRNLVPLLGFCMAKKER 375 (623)
Q Consensus 304 ~~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-------~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 375 (623)
.+.|...+.||+|+||.||++... +|..||+|.+..... ..+.+.+|++++.+++||||+++++++.+....
T Consensus 11 ~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 90 (361)
T 2yab_A 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTDV 90 (361)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEE
T ss_pred hhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCEE
Confidence 356888999999999999999965 689999999865421 357899999999999999999999999999999
Q ss_pred eEEEecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCC----CeEEeec
Q 006982 376 LLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDF----EPKISDF 451 (623)
Q Consensus 376 ~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~----~~kl~Df 451 (623)
++||||+++|+|.+++.. ...+++..+..++.|++.||.|||+. +|+||||||+|||+++++ .+||+||
T Consensus 91 ~lv~e~~~gg~L~~~l~~----~~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~~~~vkl~DF 163 (361)
T 2yab_A 91 VLILELVSGGELFDFLAQ----KESLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDF 163 (361)
T ss_dssp EEEEECCCSCBHHHHHTT----CSCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCTTSSSCCEEECCC
T ss_pred EEEEEcCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEeCCCCCccCEEEEec
Confidence 999999999999999953 35689999999999999999999999 999999999999998877 7999999
Q ss_pred ccccccCCCCCcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCcccccccHHHHHHHH
Q 006982 452 GLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQL 531 (623)
Q Consensus 452 gla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~~~~~~~~~~~l~~~~~~~ 531 (623)
|+++....... .....||+.|+|||++.+..++.++|||||||++|||++|..||...... +.....
T Consensus 164 G~a~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~~--------~~~~~i 230 (361)
T 2yab_A 164 GLAHEIEDGVE-----FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQ--------ETLANI 230 (361)
T ss_dssp SSCEECCTTCC-----CCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHH--------HHHHHH
T ss_pred CCceEcCCCCc-----cccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHH--------HHHHHH
Confidence 99987654221 12345899999999999989999999999999999999999999753221 111111
Q ss_pred hccCchhhhhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHH
Q 006982 532 SSTGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQ 581 (623)
Q Consensus 532 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~ 581 (623)
..... . ++... ....++++..+ +..|+. .||++|||+.|+++
T Consensus 231 ~~~~~--~-~~~~~-~~~~s~~~~~l---i~~~L~-~dP~~R~t~~e~l~ 272 (361)
T 2yab_A 231 TAVSY--D-FDEEF-FSQTSELAKDF---IRKLLV-KETRKRLTIQEALR 272 (361)
T ss_dssp HTTCC--C-CCHHH-HTTSCHHHHHH---HHHHSC-SSTTTSCCHHHHHT
T ss_pred HhcCC--C-CCchh-ccCCCHHHHHH---HHHHCC-CChhHCcCHHHHhc
Confidence 11000 0 00000 01123344444 445665 99999999999874
No 68
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=100.00 E-value=1.4e-39 Score=334.58 Aligned_cols=263 Identities=25% Similarity=0.361 Sum_probs=206.7
Q ss_pred ccCcccceeeccCccEEEEEEe------CCCcEEEEEEecccc--ccHHHHHHHHHHhCCC-CCCCCcceeEEEEeCCee
Q 006982 305 NSFSKNNIIGSGRTGTMYKALL------EDGTSLMVKRLQDSQ--RSEKEFVAEMATLGSV-KNRNLVPLLGFCMAKKER 375 (623)
Q Consensus 305 ~~f~~~~~lG~G~~g~Vy~~~~------~~~~~vavK~~~~~~--~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~ 375 (623)
++|...+.||+|+||.||+|.. .++..||+|++.... ...+.+.+|++++.++ +||||+++++++.+.+..
T Consensus 23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~ 102 (313)
T 1t46_A 23 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPT 102 (313)
T ss_dssp GGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred hhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecCCCc
Confidence 5688889999999999999984 356789999997543 3356789999999999 999999999999999999
Q ss_pred eEEEecCCCCCHhhhccCCCC--------------CCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeC
Q 006982 376 LLVYKHMPNGSLYDLLHPADD--------------TGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLD 441 (623)
Q Consensus 376 ~lV~e~~~~gsL~~~l~~~~~--------------~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~ 441 (623)
++||||+++|+|.+++..... ....+++..++.++.|++.||+|||+. +|+||||||+||+++
T Consensus 103 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~ 179 (313)
T 1t46_A 103 LVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARNILLT 179 (313)
T ss_dssp EEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEE
T ss_pred EEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCccceEEEc
Confidence 999999999999999965432 123589999999999999999999999 999999999999999
Q ss_pred CCCCeEEeecccccccCCCCCcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCcccc
Q 006982 442 DDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVT-GERPTNVAKAPETF 520 (623)
Q Consensus 442 ~~~~~kl~Dfgla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~ellt-g~~P~~~~~~~~~~ 520 (623)
.++.+||+|||+++........ .......+|+.|+|||.+.+..++.++||||||+++|||+| |+.||.......
T Consensus 180 ~~~~~kl~Dfg~~~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~-- 255 (313)
T 1t46_A 180 HGRITKICDFGLARDIKNDSNY--VVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDS-- 255 (313)
T ss_dssp TTTEEEECCCGGGSCTTSCTTS--EECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSH--
T ss_pred CCCCEEEccccccccccccccc--eeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcccchh--
Confidence 9999999999999876543221 11223346789999999998899999999999999999999 999997543221
Q ss_pred cccHHHHHHHHhccCchhhhhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHhhccc
Q 006982 521 KGNLVEWIAQLSSTGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAIGERY 590 (623)
Q Consensus 521 ~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~L~~i~~~~ 590 (623)
.....+..... . ......++++ ..++..|+. .||.+|||+.|+++.|+++.++.
T Consensus 256 --~~~~~~~~~~~---------~-~~~~~~~~~l---~~li~~~l~-~dp~~Rps~~ell~~L~~~~~~~ 309 (313)
T 1t46_A 256 --KFYKMIKEGFR---------M-LSPEHAPAEM---YDIMKTCWD-ADPLKRPTFKQIVQLIEKQISES 309 (313)
T ss_dssp --HHHHHHHHTCC---------C-CCCTTSCHHH---HHHHHHHTC-SSGGGSCCHHHHHHHHHHHHHHT
T ss_pred --HHHHHhccCCC---------C-CCcccCCHHH---HHHHHHHcC-CCchhCcCHHHHHHHHHHHHHHh
Confidence 11111111100 0 0011223344 444556776 99999999999999999886654
No 69
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=4.7e-39 Score=328.22 Aligned_cols=265 Identities=22% Similarity=0.319 Sum_probs=203.5
Q ss_pred cCcccceeeccCccEEEEEEeCC----CcEEEEEEecccc--ccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCee-eEE
Q 006982 306 SFSKNNIIGSGRTGTMYKALLED----GTSLMVKRLQDSQ--RSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKER-LLV 378 (623)
Q Consensus 306 ~f~~~~~lG~G~~g~Vy~~~~~~----~~~vavK~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~-~lV 378 (623)
.|...+.||+|+||.||+|...+ +..+|+|.+.... ...+.+.+|++++++++||||+++++++.+.+.. ++|
T Consensus 22 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v 101 (298)
T 3pls_A 22 VTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVL 101 (298)
T ss_dssp EEEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEE
T ss_pred EEccCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEEE
Confidence 35556899999999999998532 2379999987543 3356789999999999999999999999877665 899
Q ss_pred EecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccC
Q 006982 379 YKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMN 458 (623)
Q Consensus 379 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~ 458 (623)
+||+.+|+|.+++... ...+++..++.++.|++.||+|||+. +|+||||||+||++++++.+||+|||+++...
T Consensus 102 ~e~~~~~~L~~~~~~~---~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~ 175 (298)
T 3pls_A 102 LPYMCHGDLLQFIRSP---QRNPTVKDLISFGLQVARGMEYLAEQ---KFVHRDLAARNCMLDESFTVKVADFGLARDIL 175 (298)
T ss_dssp ECCCTTCBHHHHHHCT---TCCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTCCEEECCTTSSCTTT
T ss_pred EecccCCCHHHHHhcc---ccCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCcEEeCcCCCccccc
Confidence 9999999999999642 35689999999999999999999999 99999999999999999999999999998764
Q ss_pred CCCCcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCcccccccHHHHHHHHhccCchh
Q 006982 459 PIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQ 538 (623)
Q Consensus 459 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 538 (623)
..............+|+.|+|||.+.+..++.++||||||+++|||++|..|+...... ......+.......
T Consensus 176 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~~----~~~~~~~~~~~~~~--- 248 (298)
T 3pls_A 176 DREYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDP----FDLTHFLAQGRRLP--- 248 (298)
T ss_dssp TGGGGCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCG----GGHHHHHHTTCCCC---
T ss_pred CCcccccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCCH----HHHHHHhhcCCCCC---
Confidence 43222222223345789999999999999999999999999999999977765433221 11222111111000
Q ss_pred hhhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHhhcccCCCC
Q 006982 539 DAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAIGERYHFTT 594 (623)
Q Consensus 539 ~~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~L~~i~~~~~~~~ 594 (623)
.....+++ +.+++..|+. .||.+|||+.++++.|+++.+......
T Consensus 249 -------~~~~~~~~---l~~li~~~l~-~~p~~Rps~~~ll~~l~~~~~~l~~~~ 293 (298)
T 3pls_A 249 -------QPEYCPDS---LYQVMQQCWE-ADPAVRPTFRVLVGEVEQIVSALLGDH 293 (298)
T ss_dssp -------CCTTCCHH---HHHHHHHHTC-SSGGGSCCHHHHHHHHHHHHHHCCSCC
T ss_pred -------CCccchHH---HHHHHHHHcc-CChhhCcCHHHHHHHHHHHHHHHhccc
Confidence 01112333 3444556776 999999999999999999987764433
No 70
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=100.00 E-value=1.6e-39 Score=329.17 Aligned_cols=256 Identities=21% Similarity=0.347 Sum_probs=191.2
Q ss_pred ccCcccceeeccCccEEEEEEeCC----CcEEEEEEecccc--ccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEE
Q 006982 305 NSFSKNNIIGSGRTGTMYKALLED----GTSLMVKRLQDSQ--RSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLV 378 (623)
Q Consensus 305 ~~f~~~~~lG~G~~g~Vy~~~~~~----~~~vavK~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV 378 (623)
++|...+.||+|+||.||+|.... +..|++|++.... ...+.+.+|+.++.+++||||+++++++. .+..++|
T Consensus 15 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~lv 93 (281)
T 1mp8_A 15 ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWII 93 (281)
T ss_dssp GGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSSCEEE
T ss_pred HHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEEc-cCccEEE
Confidence 568888999999999999998643 4579999987532 33567899999999999999999999974 5678899
Q ss_pred EecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccC
Q 006982 379 YKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMN 458 (623)
Q Consensus 379 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~ 458 (623)
|||+++|+|.+++... ...+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 94 ~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 167 (281)
T 1mp8_A 94 MELCTLGELRSFLQVR---KYSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYME 167 (281)
T ss_dssp EECCTTEEHHHHHHHT---TTTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECC--------
T ss_pred EecCCCCCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHhC---CeecccccHHHEEECCCCCEEECccccccccC
Confidence 9999999999999643 24689999999999999999999999 99999999999999999999999999998765
Q ss_pred CCCCcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCcccccccHHHHHHHHhccCch
Q 006982 459 PIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVT-GERPTNVAKAPETFKGNLVEWIAQLSSTGQL 537 (623)
Q Consensus 459 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~ellt-g~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~ 537 (623)
...... .....+|+.|+|||.+....++.++||||||+++|||++ |..||...... .....+.. ....
T Consensus 168 ~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~-----~~~~~i~~---~~~~ 236 (281)
T 1mp8_A 168 DSTYYK---ASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN-----DVIGRIEN---GERL 236 (281)
T ss_dssp --------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGG-----GHHHHHHT---TCCC
T ss_pred cccccc---cccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHH-----HHHHHHHc---CCCC
Confidence 422111 112236789999999998889999999999999999997 99999754321 11111111 0000
Q ss_pred hhhhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHhhcc
Q 006982 538 QDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAIGER 589 (623)
Q Consensus 538 ~~~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~L~~i~~~ 589 (623)
. .....++++. .++..|+. .||++|||+.|+++.|+++.++
T Consensus 237 ------~-~~~~~~~~l~---~li~~~l~-~~p~~Rps~~~l~~~l~~~~~~ 277 (281)
T 1mp8_A 237 ------P-MPPNCPPTLY---SLMTKCWA-YDPSRRPRFTELKAQLSTILEE 277 (281)
T ss_dssp ------C-CCTTCCHHHH---HHHHHHTC-SSGGGSCCHHHHHHHHHHHHHH
T ss_pred ------C-CCCCCCHHHH---HHHHHHcc-CChhhCcCHHHHHHHHHHHHHH
Confidence 0 0112333444 44456776 9999999999999999998654
No 71
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=100.00 E-value=2.5e-39 Score=338.76 Aligned_cols=253 Identities=19% Similarity=0.280 Sum_probs=198.0
Q ss_pred ccCcccceeeccCccEEEEEEeC-CCcEEEEEEecccc------ccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeE
Q 006982 305 NSFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQ------RSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLL 377 (623)
Q Consensus 305 ~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~------~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 377 (623)
+.|...+.||+|+||.||+|... +++.||+|++.... ...+.+.+|++++.+++||||+++++++.+.+..++
T Consensus 24 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~l 103 (351)
T 3c0i_A 24 DVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYM 103 (351)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred cceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEE
Confidence 56889999999999999999964 68999999985421 246789999999999999999999999999999999
Q ss_pred EEecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCC---eEEeecccc
Q 006982 378 VYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFE---PKISDFGLA 454 (623)
Q Consensus 378 V~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~---~kl~Dfgla 454 (623)
||||+++|+|.+++......+..+++..+..++.|++.||+|||+. +|+||||||+|||++.++. +||+|||++
T Consensus 104 v~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~a 180 (351)
T 3c0i_A 104 VFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDN---NIIHRDVKPHCVLLASKENSAPVKLGGFGVA 180 (351)
T ss_dssp EEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECSSSTTCCEEECCCTTC
T ss_pred EEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCChHHeEEecCCCCCcEEEecCcce
Confidence 9999999999988754333345689999999999999999999999 9999999999999986655 999999999
Q ss_pred cccCCCCCcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCcccccccHHHHHHHHhcc
Q 006982 455 RLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSST 534 (623)
Q Consensus 455 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~~~~~~~~~~~l~~~~~~~~~~ 534 (623)
+........ .....||+.|+|||++.+..++.++|||||||++|||++|+.||.... . .........
T Consensus 181 ~~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~------~---~~~~~i~~~ 247 (351)
T 3c0i_A 181 IQLGESGLV----AGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTK------E---RLFEGIIKG 247 (351)
T ss_dssp EECCTTSCB----CCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSSH------H---HHHHHHHHT
T ss_pred eEecCCCee----ecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCcH------H---HHHHHHHcC
Confidence 876543221 223458999999999999899999999999999999999999997521 0 111111110
Q ss_pred CchhhhhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHH
Q 006982 535 GQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQ 581 (623)
Q Consensus 535 ~~~~~~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~ 581 (623)
.. . ..+.. ....++++.+ ++..|+. .||++|||+.|+++
T Consensus 248 ~~--~-~~~~~-~~~~s~~~~~---li~~~L~-~dP~~R~s~~e~l~ 286 (351)
T 3c0i_A 248 KY--K-MNPRQ-WSHISESAKD---LVRRMLM-LDPAERITVYEALN 286 (351)
T ss_dssp CC--C-CCHHH-HTTSCHHHHH---HHHHHTC-SSTTTSCCHHHHHT
T ss_pred CC--C-CCccc-cccCCHHHHH---HHHHHCC-CChhHCcCHHHHhc
Confidence 00 0 00000 0112334443 4445666 99999999999986
No 72
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=100.00 E-value=6.9e-39 Score=332.45 Aligned_cols=267 Identities=16% Similarity=0.166 Sum_probs=206.0
Q ss_pred ccCcccceeeccCccEEEEEEe-CCCcEEEEEEeccccccHHHHHHHHHHhCCC-CCCCCcceeEEEEeCCeeeEEEecC
Q 006982 305 NSFSKNNIIGSGRTGTMYKALL-EDGTSLMVKRLQDSQRSEKEFVAEMATLGSV-KNRNLVPLLGFCMAKKERLLVYKHM 382 (623)
Q Consensus 305 ~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lV~e~~ 382 (623)
++|...+.||+|+||.||+|.. .+++.||+|++.... ....+.+|++++.++ +||||+++++++...+..++||||+
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e~~ 87 (330)
T 2izr_A 9 PNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKS-RAPQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLELL 87 (330)
T ss_dssp TTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTC-SSCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEEECC
T ss_pred CCeEEEEEeeccCCceEEEEEECCCCcEEEEEEecccc-chHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEEEEeC
Confidence 5688899999999999999995 578999999986543 234578999999999 9999999999999999999999999
Q ss_pred CCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCC-----eEEeeccccccc
Q 006982 383 PNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFE-----PKISDFGLARLM 457 (623)
Q Consensus 383 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~-----~kl~Dfgla~~~ 457 (623)
+|+|.+++... ...+++..++.++.|++.||+|||+. +|+||||||+|||++.++. +||+|||+++..
T Consensus 88 -~~~L~~~~~~~---~~~~~~~~~~~i~~qi~~~l~~LH~~---~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~~ 160 (330)
T 2izr_A 88 -GPSLEDLFDLC---DRTFSLKTVLMIAIQLISRMEYVHSK---NLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEY 160 (330)
T ss_dssp -CCBHHHHHHHT---TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECCGGGTCTTSEEECCCTTCEES
T ss_pred -CCCHHHHHHHc---CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeeeccCCCCCCceEEEEEcccceee
Confidence 99999999643 35799999999999999999999999 9999999999999998887 999999999876
Q ss_pred CCCCCccc---ccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCcccccccHHHHHHHHhcc
Q 006982 458 NPIDTHLS---TFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSST 534 (623)
Q Consensus 458 ~~~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~~~~~~~~~~~l~~~~~~~~~~ 534 (623)
........ .......||+.|+|||++.+..++.++|||||||++|||++|+.||...... ...+........
T Consensus 161 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~-----~~~~~~~~i~~~ 235 (330)
T 2izr_A 161 IDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKAD-----TLKERYQKIGDT 235 (330)
T ss_dssp BCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCS-----SHHHHHHHHHHH
T ss_pred ecCCCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCccccccc-----cHHHHHHHHHhh
Confidence 43222111 0123446899999999999999999999999999999999999999864322 111111111000
Q ss_pred CchhhhhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHhhcccCC
Q 006982 535 GQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAIGERYHF 592 (623)
Q Consensus 535 ~~~~~~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~L~~i~~~~~~ 592 (623)
.. ......+ ....+ .+..++..|+. .+|.+||++++|.+.|+++.++...
T Consensus 236 -~~-~~~~~~~-~~~~p----~~~~li~~~l~-~~p~~RP~~~~l~~~l~~~~~~~~~ 285 (330)
T 2izr_A 236 -KR-ATPIEVL-CENFP----EMATYLRYVRR-LDFFEKPDYDYLRKLFTDLFDRKGY 285 (330)
T ss_dssp -HH-HSCHHHH-TTTCH----HHHHHHHHHHH-CCTTCCCCHHHHHHHHHHHHHHTTC
T ss_pred -hc-cCCHHHH-hccCh----HHHHHHHHHHh-CCCCCCCCHHHHHHHHHHHHHHcCC
Confidence 00 0000000 11122 34444556666 8999999999999999998776543
No 73
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=100.00 E-value=1.1e-39 Score=337.73 Aligned_cols=257 Identities=24% Similarity=0.388 Sum_probs=197.5
Q ss_pred ccCcccceeeccCccEEEEEEeC-CCcE----EEEEEecccc--ccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeE
Q 006982 305 NSFSKNNIIGSGRTGTMYKALLE-DGTS----LMVKRLQDSQ--RSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLL 377 (623)
Q Consensus 305 ~~f~~~~~lG~G~~g~Vy~~~~~-~~~~----vavK~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 377 (623)
++|...+.||+|+||.||+|... ++.. |++|.+.... .....+.+|+.++.+++||||+++++++. ....++
T Consensus 13 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~ 91 (325)
T 3kex_A 13 TELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP-GSSLQL 91 (325)
T ss_dssp TTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEEC-BSSEEE
T ss_pred hHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEc-CCccEE
Confidence 46788899999999999999964 4443 7888775432 23346778999999999999999999986 456889
Q ss_pred EEecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeeccccccc
Q 006982 378 VYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLM 457 (623)
Q Consensus 378 V~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~ 457 (623)
|+||+++|+|.+++... ...+++..++.++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++..
T Consensus 92 v~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~ 165 (325)
T 3kex_A 92 VTQYLPLGSLLDHVRQH---RGALGPQLLLNWGVQIAKGMYYLEEH---GMVHRNLAARNVLLKSPSQVQVADFGVADLL 165 (325)
T ss_dssp EEECCTTCBSHHHHHSS---GGGSCTTHHHHHHHHHHHHHHHHHHT---TCCCSCCSSTTEEESSSSCEEECSCSGGGGS
T ss_pred EEEeCCCCCHHHHHHHc---cccCCHHHHHHHHHHHHHHHHHHHhC---CCCCCccchheEEECCCCeEEECCCCccccc
Confidence 99999999999999643 25689999999999999999999999 9999999999999999999999999999987
Q ss_pred CCCCCcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCcccccccHHHHHHHHhccCc
Q 006982 458 NPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVT-GERPTNVAKAPETFKGNLVEWIAQLSSTGQ 536 (623)
Q Consensus 458 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~ellt-g~~P~~~~~~~~~~~~~l~~~~~~~~~~~~ 536 (623)
....... ......+|..|+|||++.+..++.++||||||+++|||++ |+.||...... .....+...... .
T Consensus 166 ~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~-----~~~~~~~~~~~~-~ 237 (325)
T 3kex_A 166 PPDDKQL--LYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLA-----EVPDLLEKGERL-A 237 (325)
T ss_dssp CCCTTCC--C-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTT-----HHHHHHHTTCBC-C
T ss_pred Ccccccc--cccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCHH-----HHHHHHHcCCCC-C
Confidence 5432221 1123347889999999998899999999999999999999 99999754321 111211111000 0
Q ss_pred hhhhhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHhhcc
Q 006982 537 LQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAIGER 589 (623)
Q Consensus 537 ~~~~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~L~~i~~~ 589 (623)
. ...... .+..++..|+. .||++||++.|+++.|+++...
T Consensus 238 ~---------~~~~~~---~~~~li~~~l~-~dp~~Rps~~el~~~l~~~~~~ 277 (325)
T 3kex_A 238 Q---------PQICTI---DVYMVMVKCWM-IDENIRPTFKELANEFTRMARD 277 (325)
T ss_dssp C---------CTTBCT---TTTHHHHHHTC-SCTTTSCCHHHHHHHHHHHTTS
T ss_pred C---------CCcCcH---HHHHHHHHHcC-CChhhCcCHHHHHHHHHHHHhc
Confidence 0 000111 23445556776 9999999999999999998654
No 74
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=100.00 E-value=3.6e-39 Score=331.09 Aligned_cols=259 Identities=24% Similarity=0.395 Sum_probs=196.1
Q ss_pred ccCcccceeeccCccEEEEEEeCCCcEEEEEEeccccccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEEecCCC
Q 006982 305 NSFSKNNIIGSGRTGTMYKALLEDGTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKHMPN 384 (623)
Q Consensus 305 ~~f~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~ 384 (623)
++|...+.||+|+||.||+|+.. ++.||+|++... ...+.+.+|++++.+++||||+++++++. +..++||||+++
T Consensus 8 ~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~-~~~~~~~~E~~~l~~l~hp~iv~~~~~~~--~~~~lv~e~~~~ 83 (307)
T 2eva_A 8 KEIEVEEVVGRGAFGVVCKAKWR-AKDVAIKQIESE-SERKAFIVELRQLSRVNHPNIVKLYGACL--NPVCLVMEYAEG 83 (307)
T ss_dssp GGEEEEEEEECCSSSEEEEEEET-TEEEEEEECSST-THHHHHHHHHHHHHHCCCTTBCCEEEBCT--TTTEEEEECCTT
T ss_pred hHeeeeeEeecCCCceEEEEEEC-CeeEEEEEecCh-hHHHHHHHHHHHHhcCCCCCcCeEEEEEc--CCcEEEEEcCCC
Confidence 46788899999999999999985 788999998654 34567899999999999999999999876 347899999999
Q ss_pred CCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCC-eEEeecccccccCCCCCc
Q 006982 385 GSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFE-PKISDFGLARLMNPIDTH 463 (623)
Q Consensus 385 gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~-~kl~Dfgla~~~~~~~~~ 463 (623)
|+|.+++..... ...+++..++.++.|+++||+|||+....+|+||||||+||+++.++. +||+|||++.......
T Consensus 84 ~~L~~~l~~~~~-~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~~~-- 160 (307)
T 2eva_A 84 GSLYNVLHGAEP-LPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHM-- 160 (307)
T ss_dssp CBHHHHHHCSSS-EECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC----------
T ss_pred CCHHHHHhccCC-CCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEccccccccccccc--
Confidence 999999975431 235788999999999999999999932228999999999999998886 7999999997654311
Q ss_pred ccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCcccccccHHHHHHHHhccCchhhhhch
Q 006982 464 LSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAIDK 543 (623)
Q Consensus 464 ~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~ 543 (623)
....||+.|+|||++.+..++.++||||||+++|||++|+.||...... ........... .. +
T Consensus 161 -----~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~------~~~~~~~~~~~-~~-----~ 223 (307)
T 2eva_A 161 -----TNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGP------AFRIMWAVHNG-TR-----P 223 (307)
T ss_dssp ---------CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSS------HHHHHHHHHTT-CC-----C
T ss_pred -----ccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCcc------HHHHHHHHhcC-CC-----C
Confidence 1234899999999999999999999999999999999999999753221 11111111110 00 0
Q ss_pred hhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHhhcccCC
Q 006982 544 CLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAIGERYHF 592 (623)
Q Consensus 544 ~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~L~~i~~~~~~ 592 (623)
... ...++++ .+++..|+. .||++|||++|+++.|+.+.+....
T Consensus 224 ~~~-~~~~~~l---~~li~~~l~-~dp~~Rps~~ell~~L~~~~~~~~~ 267 (307)
T 2eva_A 224 PLI-KNLPKPI---ESLMTRCWS-KDPSQRPSMEEIVKIMTHLMRYFPG 267 (307)
T ss_dssp CCB-TTCCHHH---HHHHHHHTC-SSGGGSCCHHHHHHHHHHHGGGCCC
T ss_pred Ccc-cccCHHH---HHHHHHHhc-CChhhCcCHHHHHHHHHHHHHhccC
Confidence 000 1123333 344556776 9999999999999999999776643
No 75
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.6e-39 Score=338.96 Aligned_cols=264 Identities=21% Similarity=0.315 Sum_probs=202.9
Q ss_pred hccCcccceeeccCccEEEEEEe------CCCcEEEEEEecccc--ccHHHHHHHHHHhCCC-CCCCCcceeEEEEeCCe
Q 006982 304 TNSFSKNNIIGSGRTGTMYKALL------EDGTSLMVKRLQDSQ--RSEKEFVAEMATLGSV-KNRNLVPLLGFCMAKKE 374 (623)
Q Consensus 304 ~~~f~~~~~lG~G~~g~Vy~~~~------~~~~~vavK~~~~~~--~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~ 374 (623)
.++|...+.||+|+||.||+|.. .++..||+|++.... ...+.+.+|++++.++ +||||+++++++...+.
T Consensus 44 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~ 123 (344)
T 1rjb_A 44 RENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGP 123 (344)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred HHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEeeCCc
Confidence 46788899999999999999995 245689999997542 3346789999999999 89999999999999999
Q ss_pred eeEEEecCCCCCHhhhccCCCCC-------------------CCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCC
Q 006982 375 RLLVYKHMPNGSLYDLLHPADDT-------------------GKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISS 435 (623)
Q Consensus 375 ~~lV~e~~~~gsL~~~l~~~~~~-------------------~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~ 435 (623)
.++||||+++|+|.+++...... ...+++..++.++.|++.||+|||+. +|+||||||
T Consensus 124 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp 200 (344)
T 1rjb_A 124 IYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFK---SCVHRDLAA 200 (344)
T ss_dssp CEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHT---TEEETTCSG
T ss_pred cEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCh
Confidence 99999999999999999754321 13489999999999999999999999 999999999
Q ss_pred CceeeCCCCCeEEeecccccccCCCCCcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCC
Q 006982 436 KCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVT-GERPTNVA 514 (623)
Q Consensus 436 ~NILl~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~ellt-g~~P~~~~ 514 (623)
+||+++.++.+||+|||+++........ .......+|+.|+|||.+.+..++.++||||||+++|||+| |..||...
T Consensus 201 ~NIll~~~~~~kL~Dfg~~~~~~~~~~~--~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~ 278 (344)
T 1rjb_A 201 RNVLVTHGKVVKICDFGLARDIMSDSNY--VVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGI 278 (344)
T ss_dssp GGEEEETTTEEEECCCGGGSCGGGCTTS--EEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTC
T ss_pred hhEEEcCCCcEEeCCCccCcccccCccc--eeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCcccC
Confidence 9999999999999999999876432221 11222346889999999988899999999999999999998 99999764
Q ss_pred CCcccccccHHHHHHHHhccCchhhhhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHhhccc
Q 006982 515 KAPETFKGNLVEWIAQLSSTGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAIGERY 590 (623)
Q Consensus 515 ~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~L~~i~~~~ 590 (623)
.... .....+...... . .....++++ ..++..|+. .||.+|||+.|+++.|+.+....
T Consensus 279 ~~~~----~~~~~~~~~~~~---------~-~~~~~~~~l---~~li~~~l~-~dp~~Rps~~~l~~~l~~~~~~~ 336 (344)
T 1rjb_A 279 PVDA----NFYKLIQNGFKM---------D-QPFYATEEI---YIIMQSCWA-FDSRKRPSFPNLTSFLGCQLADA 336 (344)
T ss_dssp CCSH----HHHHHHHTTCCC---------C-CCTTCCHHH---HHHHHHHTC-SSGGGSCCHHHHHHHHHHHC---
T ss_pred CcHH----HHHHHHhcCCCC---------C-CCCCCCHHH---HHHHHHHcC-CCchhCcCHHHHHHHHHHHHHHH
Confidence 3321 111111111000 0 011123344 444556776 99999999999999999886543
No 76
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=100.00 E-value=7.9e-39 Score=331.54 Aligned_cols=253 Identities=19% Similarity=0.280 Sum_probs=192.3
Q ss_pred hccCcccceeeccCccEEEEEEeC-CCcEEEEEEeccc--cccHHHHHHHHHHhCCCCCCCCcceeEEEEeCC-------
Q 006982 304 TNSFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDS--QRSEKEFVAEMATLGSVKNRNLVPLLGFCMAKK------- 373 (623)
Q Consensus 304 ~~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~------- 373 (623)
.++|...+.||+|+||.||+|+.. +++.||+|++... ....+.+.+|++++++++||||+++++++.+..
T Consensus 5 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~ 84 (332)
T 3qd2_B 5 LTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQEE 84 (332)
T ss_dssp HHHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHHH
T ss_pred hhcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhhh
Confidence 457888999999999999999976 7999999998643 334577999999999999999999999986643
Q ss_pred --------------------------------------------------eeeEEEecCCCCCHhhhccCCCCCCCccCh
Q 006982 374 --------------------------------------------------ERLLVYKHMPNGSLYDLLHPADDTGKSVDW 403 (623)
Q Consensus 374 --------------------------------------------------~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~ 403 (623)
..++||||+++|+|.+++..... ....++
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~-~~~~~~ 163 (332)
T 3qd2_B 85 MDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCS-LEDREH 163 (332)
T ss_dssp HHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCS-GGGSCH
T ss_pred hhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccC-ccchhh
Confidence 27899999999999999975432 345677
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCCCCCccc--------ccccCCCCcc
Q 006982 404 PRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLS--------TFVNGEFGDL 475 (623)
Q Consensus 404 ~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~~~~~~~--------~~~~~~~gt~ 475 (623)
..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.......... .......||+
T Consensus 164 ~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~ 240 (332)
T 3qd2_B 164 GVCLHIFIQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTK 240 (332)
T ss_dssp HHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-CG
T ss_pred HHHHHHHHHHHHHHHHHHhC---CeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCCc
Confidence 78999999999999999999 999999999999999999999999999987754321111 1123345899
Q ss_pred cccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCcccccccHHHHHHHHhccCchhhhhchhhhcCCCHHHHH
Q 006982 476 GYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAIDKCLVAKGVDNELF 555 (623)
Q Consensus 476 ~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~ 555 (623)
.|+|||++.+..++.++||||||+++|||++|..|+.. ........ ......... .....
T Consensus 241 ~y~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~----------~~~~~~~~-~~~~~~~~~---------~~~~~ 300 (332)
T 3qd2_B 241 LYMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQME----------RVRIITDV-RNLKFPLLF---------TQKYP 300 (332)
T ss_dssp GGSCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHH----------HHHHHHHH-HTTCCCHHH---------HHHCH
T ss_pred CccChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhH----------HHHHHHHh-hccCCCccc---------ccCCh
Confidence 99999999999999999999999999999998766421 00101110 010110000 11112
Q ss_pred HHHHHHhhccCCCCCCCCCCHHHHHH
Q 006982 556 QFLKVACNCVLPTIPKERPTMFEVYQ 581 (623)
Q Consensus 556 ~~~~~~~~C~~~~~P~~RPs~~ev~~ 581 (623)
.+..++..|+. .||++|||++|+++
T Consensus 301 ~~~~li~~~l~-~~p~~Rps~~~~l~ 325 (332)
T 3qd2_B 301 QEHMMVQDMLS-PSPTERPEATDIIE 325 (332)
T ss_dssp HHHHHHHHHHC-SSGGGSCCHHHHHH
T ss_pred hHHHHHHHHcc-CCCCcCCCHHHHhh
Confidence 33445556766 99999999999985
No 77
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=100.00 E-value=5.8e-39 Score=327.79 Aligned_cols=262 Identities=24% Similarity=0.370 Sum_probs=199.4
Q ss_pred ccCcccceeeccCccEEEEEEeCC----CcEEEEEEecccc--ccHHHHHHHHHHhCCCCCCCCcceeEEEEe-CCeeeE
Q 006982 305 NSFSKNNIIGSGRTGTMYKALLED----GTSLMVKRLQDSQ--RSEKEFVAEMATLGSVKNRNLVPLLGFCMA-KKERLL 377 (623)
Q Consensus 305 ~~f~~~~~lG~G~~g~Vy~~~~~~----~~~vavK~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~-~~~~~l 377 (623)
..|...+.||+|+||.||+|...+ ...+++|.+.... ...+.+.+|++++++++||||+++++++.. .+..++
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 104 (298)
T 3f66_A 25 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLV 104 (298)
T ss_dssp EEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEE
T ss_pred eehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCceEE
Confidence 457778999999999999998643 2358999987533 345678999999999999999999999754 457789
Q ss_pred EEecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeeccccccc
Q 006982 378 VYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLM 457 (623)
Q Consensus 378 V~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~ 457 (623)
||||+++|+|.+++... ...+++..++.++.|++.||+|||+. +|+||||||+||++++++.+||+|||+++..
T Consensus 105 v~e~~~~~~L~~~l~~~---~~~~~~~~~~~i~~ql~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~ 178 (298)
T 3f66_A 105 VLPYMKHGDLRNFIRNE---THNPTVKDLIGFGLQVAKGMKYLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDM 178 (298)
T ss_dssp EEECCTTCBHHHHHHCT---TCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTCCEEECSCGGGCCC
T ss_pred EEeCCCCCCHHHHHHhc---ccCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCchheEEECCCCCEEECcccccccc
Confidence 99999999999999642 35688999999999999999999999 9999999999999999999999999999876
Q ss_pred CCCCCcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCC-CCCCCCCcccccccHHHHHHHHhccCc
Q 006982 458 NPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGER-PTNVAKAPETFKGNLVEWIAQLSSTGQ 536 (623)
Q Consensus 458 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~-P~~~~~~~~~~~~~l~~~~~~~~~~~~ 536 (623)
............+..+|+.|+|||.+.+..++.++||||||+++|||++|.. ||...... ...........
T Consensus 179 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~-----~~~~~~~~~~~--- 250 (298)
T 3f66_A 179 YDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTF-----DITVYLLQGRR--- 250 (298)
T ss_dssp SCGGGCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCTT-----THHHHHHTTCC---
T ss_pred cccchhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCHH-----HHHHHHhcCCC---
Confidence 5433222222334457889999999998899999999999999999999554 55432221 11111111000
Q ss_pred hhhhhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHhhcccC
Q 006982 537 LQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAIGERYH 591 (623)
Q Consensus 537 ~~~~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~L~~i~~~~~ 591 (623)
.......+++ +.+++..|+. .+|++|||+.|+++.|+++...+.
T Consensus 251 -------~~~~~~~~~~---l~~li~~~l~-~~p~~Rps~~ell~~L~~~~~~~~ 294 (298)
T 3f66_A 251 -------LLQPEYCPDP---LYEVMLKCWH-PKAEMRPSFSELVSRISAIFSTFI 294 (298)
T ss_dssp -------CCCCTTCCHH---HHHHHHHHTC-SSGGGSCCHHHHHHHHHHHHHTSC
T ss_pred -------CCCCccCCHH---HHHHHHHHcC-CChhhCcCHHHHHHHHHHHHHhhc
Confidence 0001112333 4445556776 999999999999999999877653
No 78
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=100.00 E-value=1.9e-38 Score=323.76 Aligned_cols=269 Identities=16% Similarity=0.188 Sum_probs=207.0
Q ss_pred ccCcccceeeccCccEEEEEEe-CCCcEEEEEEeccccccHHHHHHHHHHhCCC-CCCCCcceeEEEEeCCeeeEEEecC
Q 006982 305 NSFSKNNIIGSGRTGTMYKALL-EDGTSLMVKRLQDSQRSEKEFVAEMATLGSV-KNRNLVPLLGFCMAKKERLLVYKHM 382 (623)
Q Consensus 305 ~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lV~e~~ 382 (623)
++|...+.||+|+||.||+|.. .+++.||+|++.... ....+.+|++++.++ +|+|++++++++.+....++|+||+
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e~~ 88 (298)
T 1csn_A 10 VHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS-DAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVIDLL 88 (298)
T ss_dssp TTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCT-TSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEECC
T ss_pred cceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCC-ccHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEEEEec
Confidence 5688899999999999999995 578999999986443 234577899999998 7999999999999999999999999
Q ss_pred CCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCC-----eEEeeccccccc
Q 006982 383 PNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFE-----PKISDFGLARLM 457 (623)
Q Consensus 383 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~-----~kl~Dfgla~~~ 457 (623)
+++|.+++... +..+++..++.++.|++.||+|||+. +|+||||||+||+++.++. +||+|||+++..
T Consensus 89 -~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~~ 161 (298)
T 1csn_A 89 -GPSLEDLLDLC---GRKFSVKTVAMAAKQMLARVQSIHEK---SLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFY 161 (298)
T ss_dssp -CCBHHHHHHHT---TTCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEES
T ss_pred -CCCHHHHHHHh---ccCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEeccCCCCCCCeEEEEECcccccc
Confidence 99999999643 24689999999999999999999999 9999999999999987776 999999999876
Q ss_pred CCCCCccc---ccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCcccccccHHHHHHHHhcc
Q 006982 458 NPIDTHLS---TFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSST 534 (623)
Q Consensus 458 ~~~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~~~~~~~~~~~l~~~~~~~~~~ 534 (623)
........ .......||+.|+|||++.+..++.++||||||+++|||++|+.||......... .....+......
T Consensus 162 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~--~~~~~~~~~~~~ 239 (298)
T 1csn_A 162 RDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNK--QKYERIGEKKQS 239 (298)
T ss_dssp BCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHH--HHHHHHHHHHHH
T ss_pred ccccccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhccccH--HHHHHHHhhccC
Confidence 54322111 1123345899999999999999999999999999999999999999764332110 111111111111
Q ss_pred CchhhhhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHhhcccCCC
Q 006982 535 GQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAIGERYHFT 593 (623)
Q Consensus 535 ~~~~~~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~L~~i~~~~~~~ 593 (623)
....+.. ...++++.++ +..|+. .||++||++++|++.|+++.++....
T Consensus 240 ~~~~~~~------~~~~~~l~~l---i~~~l~-~dp~~RP~~~~l~~~l~~~~~~~~~~ 288 (298)
T 1csn_A 240 TPLRELC------AGFPEEFYKY---MHYARN-LAFDATPDYDYLQGLFSKVLERLNTT 288 (298)
T ss_dssp SCHHHHT------TTSCHHHHHH---HHHHHH-CCTTCCCCHHHHHHHHHHHHHHTTCC
T ss_pred ccHHHHH------hhCcHHHHHH---HHHHhc-CCcccCCCHHHHHHHHHHHHHhcCCC
Confidence 1111111 1233444444 445665 89999999999999999998776543
No 79
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=100.00 E-value=1.7e-39 Score=334.10 Aligned_cols=202 Identities=24% Similarity=0.353 Sum_probs=172.7
Q ss_pred hccCcccceeeccCccEEEEEEeCCCcEEEEEEeccccc---cHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEEe
Q 006982 304 TNSFSKNNIIGSGRTGTMYKALLEDGTSLMVKRLQDSQR---SEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYK 380 (623)
Q Consensus 304 ~~~f~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~---~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e 380 (623)
.++|...+.||+|+||.||+|...+++.||+|++..... ....+.+|++++++++||||+++++++.+....++|||
T Consensus 20 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 99 (311)
T 3niz_A 20 MEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVFE 99 (311)
T ss_dssp SCEEEEEEEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEEEEE
T ss_pred HhhhHhhhhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEEEEc
Confidence 367888999999999999999998899999999975432 24678899999999999999999999999999999999
Q ss_pred cCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCCC
Q 006982 381 HMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPI 460 (623)
Q Consensus 381 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~~ 460 (623)
|+++ +|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 100 ~~~~-~l~~~~~~~---~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~ 172 (311)
T 3niz_A 100 FMEK-DLKKVLDEN---KTGLQDSQIKIYLYQLLRGVAHCHQH---RILHRDLKPQNLLINSDGALKLADFGLARAFGIP 172 (311)
T ss_dssp CCSE-EHHHHHHTC---TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEETTSC
T ss_pred CCCC-CHHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCchHhEEECCCCCEEEccCcCceecCCC
Confidence 9985 888887542 24589999999999999999999999 9999999999999999999999999999876432
Q ss_pred CCcccccccCCCCcccccCcccccC-CCCCcchhHHHHHHHHHHHHhCCCCCCCCCC
Q 006982 461 DTHLSTFVNGEFGDLGYVAPEYART-LVATPKGDVYSFGTVLLELVTGERPTNVAKA 516 (623)
Q Consensus 461 ~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~k~DV~sfGvil~elltg~~P~~~~~~ 516 (623)
... .....+|+.|+|||++.+ ..++.++||||+||++|||++|+.||.....
T Consensus 173 ~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~ 225 (311)
T 3niz_A 173 VRS----YTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTD 225 (311)
T ss_dssp CC-------CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSST
T ss_pred ccc----ccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCCh
Confidence 221 122357999999999876 5689999999999999999999999976443
No 80
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=100.00 E-value=9e-39 Score=332.92 Aligned_cols=272 Identities=22% Similarity=0.319 Sum_probs=207.1
Q ss_pred HHHhccCcccceeeccCccEEEEEEeCCCcEEEEEEeccccccHHHHHHHHHHhCC--CCCCCCcceeEEEEeCC----e
Q 006982 301 MKATNSFSKNNIIGSGRTGTMYKALLEDGTSLMVKRLQDSQRSEKEFVAEMATLGS--VKNRNLVPLLGFCMAKK----E 374 (623)
Q Consensus 301 ~~~~~~f~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~--l~h~niv~l~~~~~~~~----~ 374 (623)
....++|...+.||+|+||.||+|+. +++.||+|++.... ...+.+|.+++.. ++||||+++++++.... .
T Consensus 38 ~~~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~--~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~~~~~ 114 (342)
T 1b6c_B 38 RTIARTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSRE--ERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQ 114 (342)
T ss_dssp HHHHHHCEEEEEEEEETTEEEEEEEE-TTEEEEEEEECGGG--HHHHHHHHHHHHHSCCCCTTBCCEEEEEECCCSSCCC
T ss_pred ccccccEEEEeeecCCCCcEEEEEEE-cCccEEEEEeCchh--HHHHHHHHHHHHHhhcCCCcEEEEEeeecccCCccce
Confidence 44567899999999999999999998 48999999996543 4566777777665 79999999999998876 7
Q ss_pred eeEEEecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHH--------hcCCCCcEecCCCCCceeeCCCCCe
Q 006982 375 RLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLH--------HNCNPRIIHRNISSKCILLDDDFEP 446 (623)
Q Consensus 375 ~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH--------~~~~~~i~H~dlk~~NILl~~~~~~ 446 (623)
.++||||+++|+|.+++.. ..+++..++.++.|++.||+||| +. +|+||||||+||+++.++.+
T Consensus 115 ~~lv~e~~~~g~L~~~l~~-----~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~NIll~~~~~~ 186 (342)
T 1b6c_B 115 LWLVSDYHEHGSLFDYLNR-----YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKP---AIAHRDLKSKNILVKKNGTC 186 (342)
T ss_dssp EEEEECCCTTCBHHHHHHH-----CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBC---EEECSCCSGGGEEECTTSCE
T ss_pred eEEEEeecCCCcHHHHHhc-----cCccHHHHHHHHHHHHHHHHHHHHHHhhhcccC---CeeeCCCCHHHEEECCCCCE
Confidence 8999999999999999953 35899999999999999999999 66 99999999999999999999
Q ss_pred EEeecccccccCCCCCcccccccCCCCcccccCcccccCC------CCCcchhHHHHHHHHHHHHhC----------CCC
Q 006982 447 KISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTL------VATPKGDVYSFGTVLLELVTG----------ERP 510 (623)
Q Consensus 447 kl~Dfgla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~------~~s~k~DV~sfGvil~elltg----------~~P 510 (623)
||+|||+++.................||+.|+|||.+.+. .++.++||||||+++|||++| ..|
T Consensus 187 kL~Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~p 266 (342)
T 1b6c_B 187 CIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLP 266 (342)
T ss_dssp EECCCTTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCT
T ss_pred EEEECCCceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCcccccccC
Confidence 9999999987654332222223344689999999998765 234789999999999999999 667
Q ss_pred CCCCCCcccccccHHHHHHHHhccCchhhhhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHhhccc
Q 006982 511 TNVAKAPETFKGNLVEWIAQLSSTGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAIGERY 590 (623)
Q Consensus 511 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~L~~i~~~~ 590 (623)
|....... .....+....... ....-+.... ...+....+.+++..|+. .||++|||+.||++.|+++.++.
T Consensus 267 ~~~~~~~~---~~~~~~~~~~~~~-~~~~~~~~~~---~~~~~~~~l~~li~~cl~-~dp~~Rps~~~i~~~L~~i~~~~ 338 (342)
T 1b6c_B 267 YYDLVPSD---PSVEEMRKVVCEQ-KLRPNIPNRW---QSCEALRVMAKIMRECWY-ANGAARLTALRIKKTLSQLSQQE 338 (342)
T ss_dssp TTTTSCSS---CCHHHHHHHHTTS-CCCCCCCGGG---GTSHHHHHHHHHHHHHCC-SSGGGSCCHHHHHHHHHHHHHTT
T ss_pred ccccCcCc---ccHHHHHHHHHHH-HhCCCCcccc---cchhHHHHHHHHHHHHhc-cChhhCCCHHHHHHHHHHHHHHh
Confidence 76433221 1222222221111 1100011111 012344556677778887 99999999999999999998765
Q ss_pred C
Q 006982 591 H 591 (623)
Q Consensus 591 ~ 591 (623)
.
T Consensus 339 ~ 339 (342)
T 1b6c_B 339 G 339 (342)
T ss_dssp C
T ss_pred c
Confidence 3
No 81
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=100.00 E-value=3.8e-39 Score=329.37 Aligned_cols=247 Identities=21% Similarity=0.308 Sum_probs=189.5
Q ss_pred ccCcccceeeccCccEEEEEEeC-CCcEEEEEEeccccc---------------------------cHHHHHHHHHHhCC
Q 006982 305 NSFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQR---------------------------SEKEFVAEMATLGS 356 (623)
Q Consensus 305 ~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---------------------------~~~~~~~e~~~l~~ 356 (623)
++|...+.||+|+||.||+|... +++.||+|++..... ..+.+.+|++++++
T Consensus 13 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~ 92 (298)
T 2zv2_A 13 NQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILKK 92 (298)
T ss_dssp TTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHHT
T ss_pred cceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHHh
Confidence 57888999999999999999964 688999999864321 12468899999999
Q ss_pred CCCCCCcceeEEEEe--CCeeeEEEecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCC
Q 006982 357 VKNRNLVPLLGFCMA--KKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNIS 434 (623)
Q Consensus 357 l~h~niv~l~~~~~~--~~~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk 434 (623)
++||||+++++++.+ ....++||||+++|+|.+++. ...+++..++.++.|++.||+|||+. +|+|||||
T Consensus 93 l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~-----~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlk 164 (298)
T 2zv2_A 93 LDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPT-----LKPLSEDQARFYFQDLIKGIEYLHYQ---KIIHRDIK 164 (298)
T ss_dssp CCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSC-----SSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCC
T ss_pred CCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhh-----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCC
Confidence 999999999999987 467899999999999998763 35689999999999999999999999 99999999
Q ss_pred CCceeeCCCCCeEEeecccccccCCCCCcccccccCCCCcccccCcccccCCC---CCcchhHHHHHHHHHHHHhCCCCC
Q 006982 435 SKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLV---ATPKGDVYSFGTVLLELVTGERPT 511 (623)
Q Consensus 435 ~~NILl~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~---~s~k~DV~sfGvil~elltg~~P~ 511 (623)
|+||+++.++.+||+|||+++........ .....||+.|+|||.+.+.. ++.++|||||||++|||++|+.||
T Consensus 165 p~Nil~~~~~~~kl~Dfg~~~~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf 240 (298)
T 2zv2_A 165 PSNLLVGEDGHIKIADFGVSNEFKGSDAL----LSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPF 240 (298)
T ss_dssp GGGEEECTTSCEEECCCTTCEECSSSSCE----ECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSS
T ss_pred HHHEEECCCCCEEEecCCCcccccccccc----ccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCC
Confidence 99999999999999999999876543221 22345899999999997654 478899999999999999999999
Q ss_pred CCCCCcccccccHHHHHHHHhccCchhhhhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHH
Q 006982 512 NVAKAPETFKGNLVEWIAQLSSTGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQ 581 (623)
Q Consensus 512 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~ 581 (623)
..... ..+....... .. .. + .....++++. .++..|+. .||++|||+.|+++
T Consensus 241 ~~~~~--------~~~~~~~~~~-~~-~~--~--~~~~~~~~l~---~li~~~l~-~dp~~R~s~~e~l~ 292 (298)
T 2zv2_A 241 MDERI--------MCLHSKIKSQ-AL-EF--P--DQPDIAEDLK---DLITRMLD-KNPESRIVVPEIKL 292 (298)
T ss_dssp CCSSH--------HHHHHHHHHC-CC-CC--C--SSSCCCHHHH---HHHHHHTC-SCTTTSCCHHHHTT
T ss_pred CCccH--------HHHHHHHhcc-cC-CC--C--CccccCHHHH---HHHHHHhh-cChhhCCCHHHHhc
Confidence 64211 1111111110 00 00 0 0112334444 44456666 99999999999865
No 82
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=100.00 E-value=1.1e-39 Score=360.17 Aligned_cols=258 Identities=27% Similarity=0.398 Sum_probs=206.7
Q ss_pred hccCcccceeeccCccEEEEEEeCCCcEEEEEEeccccccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEEecCC
Q 006982 304 TNSFSKNNIIGSGRTGTMYKALLEDGTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKHMP 383 (623)
Q Consensus 304 ~~~f~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~ 383 (623)
.++|...+.||+|+||.||+|.+.++..||||+++......+.|.+|+++|++++||||+++++++.+ +..++||||++
T Consensus 266 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~lv~e~~~ 344 (535)
T 2h8h_A 266 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMS 344 (535)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTEEEEEEEECTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECCCT
T ss_pred hhhhhhheecccCCCeEEEEEEECCCceEEEEEeCCCCCCHHHHHHHHHHHHhCCCCCEeeEEEEEee-ccceEeeehhc
Confidence 45688889999999999999999888899999998766667889999999999999999999999876 67899999999
Q ss_pred CCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCCCCCc
Q 006982 384 NGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTH 463 (623)
Q Consensus 384 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~~~~~ 463 (623)
+|+|.+++.... +..+++..++.++.|++.||+|||+. +|+||||||+|||+++++.+||+|||+++......
T Consensus 345 ~gsL~~~l~~~~--~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~-- 417 (535)
T 2h8h_A 345 KGSLLDFLKGET--GKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNE-- 417 (535)
T ss_dssp TEEHHHHHSHHH--HTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCTTSTTTCCCHH--
T ss_pred CCcHHHHHhhcC--CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHhhEEEcCCCcEEEcccccceecCCCc--
Confidence 999999996321 24589999999999999999999999 99999999999999999999999999998764311
Q ss_pred ccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCcccccccHHHHHHHHhccCchhhhhc
Q 006982 464 LSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVT-GERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAID 542 (623)
Q Consensus 464 ~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~ellt-g~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d 542 (623)
.....+..++..|+|||++....++.++|||||||++|||++ |+.||..... .+..........+ .
T Consensus 418 -~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~--------~~~~~~i~~~~~~-~--- 484 (535)
T 2h8h_A 418 -YTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN--------REVLDQVERGYRM-P--- 484 (535)
T ss_dssp -HHTTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCH--------HHHHHHHHTTCCC-C---
T ss_pred -eecccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCH--------HHHHHHHHcCCCC-C---
Confidence 111223346789999999998899999999999999999999 9999865321 1111111111000 0
Q ss_pred hhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHhhcc
Q 006982 543 KCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAIGER 589 (623)
Q Consensus 543 ~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~L~~i~~~ 589 (623)
......+++ .+++..|+. .||++|||+++|++.|+++...
T Consensus 485 ---~~~~~~~~l---~~li~~cl~-~dP~~RPt~~~l~~~L~~~~~~ 524 (535)
T 2h8h_A 485 ---CPPECPESL---HDLMCQCWR-KEPEERPTFEYLQAFLEDYFTS 524 (535)
T ss_dssp ---CCTTCCHHH---HHHHHHHTC-SSGGGSCCHHHHHHHHHTSSCC
T ss_pred ---CCCCCCHHH---HHHHHHHcC-CChhHCcCHHHHHHHHHHHhhc
Confidence 011233334 445556777 9999999999999999987543
No 83
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=100.00 E-value=1.1e-38 Score=337.72 Aligned_cols=200 Identities=17% Similarity=0.240 Sum_probs=174.0
Q ss_pred hccCcccceeeccCccEEEEEEeC-CCcEEEEEEeccccc----cHHHHHHHHHHhCCC-CCCCCcceeEEEEeCCeeeE
Q 006982 304 TNSFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQR----SEKEFVAEMATLGSV-KNRNLVPLLGFCMAKKERLL 377 (623)
Q Consensus 304 ~~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~----~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~l 377 (623)
.++|...++||+|+||.||+++.+ +++.||+|+++.... ....+..|..++.++ +||||+++++++.+.+..++
T Consensus 51 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~l 130 (396)
T 4dc2_A 51 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFF 130 (396)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEE
T ss_pred hhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEEE
Confidence 357899999999999999999965 578899999976432 223577899988776 89999999999999999999
Q ss_pred EEecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeeccccccc
Q 006982 378 VYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLM 457 (623)
Q Consensus 378 V~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~ 457 (623)
||||+++|+|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++..
T Consensus 131 V~E~~~gg~L~~~l~~----~~~l~~~~~~~~~~qi~~aL~~LH~~---givHrDLKp~NILl~~~g~ikL~DFGla~~~ 203 (396)
T 4dc2_A 131 VIEYVNGGDLMFHMQR----QRKLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEG 203 (396)
T ss_dssp EEECCTTCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCC
T ss_pred EEEcCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CEEeccCCHHHEEECCCCCEEEeecceeeec
Confidence 9999999999999963 24689999999999999999999999 9999999999999999999999999999863
Q ss_pred CCCCCcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCC
Q 006982 458 NPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVA 514 (623)
Q Consensus 458 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~~ 514 (623)
...... .....||+.|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 204 ~~~~~~----~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~ 256 (396)
T 4dc2_A 204 LRPGDT----TSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIV 256 (396)
T ss_dssp CCTTCC----BCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTT
T ss_pred ccCCCc----cccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccc
Confidence 322211 22345899999999999999999999999999999999999999754
No 84
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=100.00 E-value=9.8e-39 Score=324.85 Aligned_cols=261 Identities=26% Similarity=0.432 Sum_probs=191.0
Q ss_pred hccCcccceeeccCccEEEEEEeCCCcEEEEEEecccc---ccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEEe
Q 006982 304 TNSFSKNNIIGSGRTGTMYKALLEDGTSLMVKRLQDSQ---RSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYK 380 (623)
Q Consensus 304 ~~~f~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e 380 (623)
.++|...+.||+|+||.||+|+..+ .||+|+++... ...+.+.+|++++++++||||+++++++ .....++|+|
T Consensus 23 ~~~y~~~~~lG~G~~g~Vy~~~~~~--~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-~~~~~~lv~e 99 (289)
T 3og7_A 23 DGQITVGQRIGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAPQLAIVTQ 99 (289)
T ss_dssp TTSCEEEEEEEECSSEEEEEEESSS--EEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-CSSSCEEEEE
T ss_pred ccceeeeeEecCCCCeEEEEEEEcC--ceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeec-cCCccEEEEE
Confidence 3568889999999999999998753 59999987543 3346789999999999999999999965 4566899999
Q ss_pred cCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCCC
Q 006982 381 HMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPI 460 (623)
Q Consensus 381 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~~ 460 (623)
|+++++|.+++... ...+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 100 ~~~~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~~L~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 173 (289)
T 3og7_A 100 WCEGSSLYHHLHAS---ETKFEMKKLIDIARQTARGMDYLHAK---SIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRW 173 (289)
T ss_dssp CCCEEEHHHHHTTC------CCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEETTTEEEECCCC--------
T ss_pred ecCCCcHHHHHhhc---cCCCCHHHHHHHHHHHHHHHHHHHhC---CcccccCccceEEECCCCCEEEccceeccccccc
Confidence 99999999999643 35689999999999999999999999 9999999999999999999999999999865432
Q ss_pred CCcccccccCCCCcccccCccccc---CCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCcccccccHHHHHHHHhccCch
Q 006982 461 DTHLSTFVNGEFGDLGYVAPEYAR---TLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQL 537 (623)
Q Consensus 461 ~~~~~~~~~~~~gt~~y~aPE~~~---~~~~s~k~DV~sfGvil~elltg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~ 537 (623)
... .......||+.|+|||.+. ...++.++||||||+++|||++|+.||......+ .+...+.........
T Consensus 174 ~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~----~~~~~~~~~~~~~~~ 247 (289)
T 3og7_A 174 SGS--HQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRD----QIIEMVGRGSLSPDL 247 (289)
T ss_dssp ------------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCHH----HHHHHHHHTSCCCCT
T ss_pred ccc--ccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchHH----HHHHHhcccccCcch
Confidence 111 1122345899999999986 5678889999999999999999999997543321 111111111111111
Q ss_pred hhhhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHhhcc
Q 006982 538 QDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAIGER 589 (623)
Q Consensus 538 ~~~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~L~~i~~~ 589 (623)
..+ ....+++ +.+++..|+. .+|++|||+.|+++.|+++.++
T Consensus 248 ~~~------~~~~~~~---l~~li~~~l~-~~p~~Rps~~ell~~L~~l~~e 289 (289)
T 3og7_A 248 SKV------RSNCPKR---MKRLMAECLK-KKRDERPSFPRILAEIEELARE 289 (289)
T ss_dssp TSS------CTTSCHH---HHHHHHHHTC-SSGGGSCCHHHHHHHHHHTTCC
T ss_pred hhc------cccCCHH---HHHHHHHHcc-CChhhCCCHHHHHHHHHHHhhC
Confidence 110 0112333 4444556776 9999999999999999998753
No 85
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.8e-38 Score=328.75 Aligned_cols=249 Identities=22% Similarity=0.311 Sum_probs=197.6
Q ss_pred ccCcccceeeccCccEEEEEEeC-CCcEEEEEEecccc-------ccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeee
Q 006982 305 NSFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQ-------RSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERL 376 (623)
Q Consensus 305 ~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-------~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 376 (623)
+.|...+.||+|+||.||++... ++..||+|.+.... ...+.+.+|++++.+++||||+++++++.+....+
T Consensus 11 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~ 90 (326)
T 2y0a_A 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVI 90 (326)
T ss_dssp HHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred cceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEE
Confidence 46888999999999999999965 68999999986532 24678999999999999999999999999999999
Q ss_pred EEEecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCC----CeEEeecc
Q 006982 377 LVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDF----EPKISDFG 452 (623)
Q Consensus 377 lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~----~~kl~Dfg 452 (623)
+||||+++|+|.+++.. ...+++..+..++.|++.||.|||+. +|+||||||+||+++.++ .+||+|||
T Consensus 91 lv~e~~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg 163 (326)
T 2y0a_A 91 LILELVAGGELFDFLAE----KESLTEEEATEFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFG 163 (326)
T ss_dssp EEEECCCSCBHHHHHTT----SSCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESCSSSSSCCEEECCCT
T ss_pred EEEEcCCCCCHHHHHHh----cCCcCHHHHHHHHHHHHHHHHHHHHC---CeEcCCCCHHHEEEecCCCCCCCEEEEECC
Confidence 99999999999999953 35689999999999999999999999 999999999999999887 89999999
Q ss_pred cccccCCCCCcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCcccccccHHHHHHHHh
Q 006982 453 LARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLS 532 (623)
Q Consensus 453 la~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~~~~~~~~~~~l~~~~~~~~ 532 (623)
+++....... .....||+.|+|||++.+..++.++|||||||++|||++|+.||...... +......
T Consensus 164 ~a~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~--------~~~~~~~ 230 (326)
T 2y0a_A 164 LAHKIDFGNE-----FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQ--------ETLANVS 230 (326)
T ss_dssp TCEECCTTSC-----CCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHH--------HHHHHHH
T ss_pred CCeECCCCCc-----cccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHH--------HHHHHHH
Confidence 9987653221 12345899999999999889999999999999999999999999753221 1111111
Q ss_pred ccCchhhhhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHH
Q 006982 533 STGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQ 581 (623)
Q Consensus 533 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~ 581 (623)
.... ...+... ...+.++. .++..|+. .||++|||+.|+++
T Consensus 231 ~~~~--~~~~~~~--~~~~~~~~---~li~~~L~-~dP~~Rpt~~e~l~ 271 (326)
T 2y0a_A 231 AVNY--EFEDEYF--SNTSALAK---DFIRRLLV-KDPKKRMTIQDSLQ 271 (326)
T ss_dssp HTCC--CCCHHHH--TTSCHHHH---HHHHHHSC-SSGGGSCCHHHHHH
T ss_pred hcCC--CcCcccc--ccCCHHHH---HHHHHHcc-CChhhCCCHHHHhc
Confidence 0000 0000000 11233333 34446666 99999999999986
No 86
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=7.9e-39 Score=358.41 Aligned_cols=253 Identities=23% Similarity=0.402 Sum_probs=196.2
Q ss_pred eeeccCccEEEEEEeC---CCcEEEEEEecccc--ccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEEecCCCCC
Q 006982 312 IIGSGRTGTMYKALLE---DGTSLMVKRLQDSQ--RSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKHMPNGS 386 (623)
Q Consensus 312 ~lG~G~~g~Vy~~~~~---~~~~vavK~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~gs 386 (623)
.||+|+||.||+|.+. ++..||||+++... ...+.+.+|++++.+++|||||++++++.. +..++||||+++|+
T Consensus 343 ~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~~~~lv~E~~~~g~ 421 (613)
T 2ozo_A 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLVMEMAGGGP 421 (613)
T ss_dssp EEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES-SSEEEEEECCTTCB
T ss_pred EEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-CCeEEEEEeCCCCc
Confidence 7999999999999864 56679999997642 456789999999999999999999999976 56899999999999
Q ss_pred HhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCCCCCcccc
Q 006982 387 LYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLST 466 (623)
Q Consensus 387 L~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~~~~~~~~ 466 (623)
|.+++... ...+++..++.++.|++.||+|||+. +|+||||||+|||+++++.+||+|||+++...........
T Consensus 422 L~~~l~~~---~~~l~~~~~~~i~~qi~~~L~~LH~~---~iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~ 495 (613)
T 2ozo_A 422 LHKFLVGK---REEIPVSNVAELLHQVSMGMKYLEEK---NFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTA 495 (613)
T ss_dssp HHHHHTTC---TTTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCSTTTTCC--------
T ss_pred HHHHHhhc---cCCCCHHHHHHHHHHHHHHHHHHHHC---CEEcCcCCHHHEEEcCCCcEEEeeccCcccccCCCceeee
Confidence 99999643 35689999999999999999999999 9999999999999999999999999999876543221111
Q ss_pred cccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCcccccccHHHHHHHHhccCchhhhhchhh
Q 006982 467 FVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVT-GERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAIDKCL 545 (623)
Q Consensus 467 ~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~ellt-g~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l 545 (623)
.....+++.|+|||++.+..++.++|||||||++|||++ |+.||......+ +...+.. ...+ .
T Consensus 496 -~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~-----~~~~i~~---~~~~-~------ 559 (613)
T 2ozo_A 496 -RSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPE-----VMAFIEQ---GKRM-E------ 559 (613)
T ss_dssp -------CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCSHH-----HHHHHHT---TCCC-C------
T ss_pred -ccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCHHH-----HHHHHHc---CCCC-C------
Confidence 112235689999999998999999999999999999998 999997643321 1111111 1000 0
Q ss_pred hcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHhhcccC
Q 006982 546 VAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAIGERYH 591 (623)
Q Consensus 546 ~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~L~~i~~~~~ 591 (623)
.....+++ +.+++..|+. .+|++||++.+|++.|+.+.....
T Consensus 560 ~p~~~~~~---l~~li~~cl~-~dP~~RPs~~~l~~~L~~~~~~~~ 601 (613)
T 2ozo_A 560 CPPECPPE---LYALMSDCWI-YKWEDRPDFLTVEQRMRACYYSLA 601 (613)
T ss_dssp CCTTCCHH---HHHHHHHTTC-SSTTTSCCHHHHHHHHHHHHHHHS
T ss_pred CCCcCCHH---HHHHHHHHcC-CChhHCcCHHHHHHHHHHHHHHhc
Confidence 01123334 4445567877 999999999999999998765543
No 87
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=100.00 E-value=8.3e-39 Score=324.80 Aligned_cols=251 Identities=26% Similarity=0.440 Sum_probs=194.6
Q ss_pred ccCcccceeeccCccEEEEEEe-CCCcEEEEEEeccccc--c------HHHHHHHHHHhCCCCCCCCcceeEEEEeCCee
Q 006982 305 NSFSKNNIIGSGRTGTMYKALL-EDGTSLMVKRLQDSQR--S------EKEFVAEMATLGSVKNRNLVPLLGFCMAKKER 375 (623)
Q Consensus 305 ~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~------~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 375 (623)
++|...+.||+|+||.||+|.. .+++.||+|++..... . .+.+.+|++++.+++||||+++++++.+..
T Consensus 19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~-- 96 (287)
T 4f0f_A 19 NEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP-- 96 (287)
T ss_dssp TTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTT--
T ss_pred ccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCC--
Confidence 5688889999999999999996 4789999999864321 1 167899999999999999999999986554
Q ss_pred eEEEecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCC--cEecCCCCCceeeCCCCC-----eEE
Q 006982 376 LLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPR--IIHRNISSKCILLDDDFE-----PKI 448 (623)
Q Consensus 376 ~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~--i~H~dlk~~NILl~~~~~-----~kl 448 (623)
++||||+++|+|.+++... ...+++..++.++.|++.||+|||+. + |+||||||+||+++.++. +||
T Consensus 97 ~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~~l~~~l~~lH~~---~~~ivH~dikp~Nil~~~~~~~~~~~~kl 170 (287)
T 4f0f_A 97 RMVMEFVPCGDLYHRLLDK---AHPIKWSVKLRLMLDIALGIEYMQNQ---NPPIVHRDLRSPNIFLQSLDENAPVCAKV 170 (287)
T ss_dssp EEEEECCTTCBHHHHHHCT---TSCCCHHHHHHHHHHHHHHHHHHHTS---SSCCBCSCCSGGGEEESCCCTTCSCCEEE
T ss_pred eEEEEecCCCCHHHHHhcc---cCCccHHHHHHHHHHHHHHHHHHHhC---CCCeecCCCCcceEEEeccCCCCceeEEe
Confidence 7999999999999988643 35689999999999999999999998 7 999999999999988776 999
Q ss_pred eecccccccCCCCCcccccccCCCCcccccCcccc--cCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCcccccccHHH
Q 006982 449 SDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYA--RTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVE 526 (623)
Q Consensus 449 ~Dfgla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~--~~~~~s~k~DV~sfGvil~elltg~~P~~~~~~~~~~~~~l~~ 526 (623)
+|||+++..... .....||+.|+|||.+ ....++.++||||||+++|||++|+.||...... ...
T Consensus 171 ~Dfg~~~~~~~~-------~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~------~~~ 237 (287)
T 4f0f_A 171 ADFGLSQQSVHS-------VSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYG------KIK 237 (287)
T ss_dssp CCCTTCBCCSSC-------EECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCC------HHH
T ss_pred CCCCcccccccc-------ccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCcccccc------HHH
Confidence 999999854321 1234589999999998 4456789999999999999999999999754321 111
Q ss_pred HHHHHhccCchhhhhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHh
Q 006982 527 WIAQLSSTGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAI 586 (623)
Q Consensus 527 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~L~~i 586 (623)
........... +.+ ....++++ .+++..|+. .||++|||++|+++.|+++
T Consensus 238 ~~~~~~~~~~~-----~~~-~~~~~~~l---~~li~~~l~-~dp~~Rps~~~ll~~L~~l 287 (287)
T 4f0f_A 238 FINMIREEGLR-----PTI-PEDCPPRL---RNVIELCWS-GDPKKRPHFSYIVKELSEL 287 (287)
T ss_dssp HHHHHHHSCCC-----CCC-CTTSCHHH---HHHHHHHTC-SSGGGSCCHHHHHHHHHTC
T ss_pred HHHHHhccCCC-----CCC-CcccCHHH---HHHHHHHhc-CChhhCcCHHHHHHHHHhC
Confidence 11111111000 000 11123333 344456766 9999999999999999864
No 88
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=100.00 E-value=1.7e-39 Score=335.29 Aligned_cols=269 Identities=24% Similarity=0.343 Sum_probs=203.4
Q ss_pred CcccceeeccCccEEEEEEeC-----CCcEEEEEEecccc--ccHHHHHHHHHHhCCCCCCCCcceeEEEEeC--CeeeE
Q 006982 307 FSKNNIIGSGRTGTMYKALLE-----DGTSLMVKRLQDSQ--RSEKEFVAEMATLGSVKNRNLVPLLGFCMAK--KERLL 377 (623)
Q Consensus 307 f~~~~~lG~G~~g~Vy~~~~~-----~~~~vavK~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~~l 377 (623)
|...+.||+|+||.||++.+. +++.||+|++.... .....+.+|++++.+++||||+++++++.+. ...++
T Consensus 33 ~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~l 112 (318)
T 3lxp_A 33 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQL 112 (318)
T ss_dssp EEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEEEE
T ss_pred HhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceEEE
Confidence 478899999999999998642 68889999997653 3356789999999999999999999999884 56789
Q ss_pred EEecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeeccccccc
Q 006982 378 VYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLM 457 (623)
Q Consensus 378 V~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~ 457 (623)
||||+++|+|.+++.. ..+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++..
T Consensus 113 v~e~~~~~~L~~~l~~-----~~~~~~~~~~i~~~l~~~l~~LH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~ 184 (318)
T 3lxp_A 113 VMEYVPLGSLRDYLPR-----HSIGLAQLLLFAQQICEGMAYLHAQ---HYIHRDLAARNVLLDNDRLVKIGDFGLAKAV 184 (318)
T ss_dssp EECCCTTCBHHHHGGG-----SCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCGGGCEEC
T ss_pred EEecccCCcHHHHHhh-----CCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCchheEEEcCCCCEEECCccccccc
Confidence 9999999999999953 3489999999999999999999999 9999999999999999999999999999877
Q ss_pred CCCCCcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCcccccccHHHHHHHHhccCch
Q 006982 458 NPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQL 537 (623)
Q Consensus 458 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~ 537 (623)
....... .......+|..|+|||++.+..++.++||||||+++|||++|+.||........ ....+.........+
T Consensus 185 ~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~---~~~~~~~~~~~~~~~ 260 (318)
T 3lxp_A 185 PEGHEYY-RVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFL---ELIGIAQGQMTVLRL 260 (318)
T ss_dssp CTTCSEE-EC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHH---HHHCSCCHHHHHHHH
T ss_pred ccccccc-ccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhh---hhhcccccchhHHHH
Confidence 5432211 122234478889999999988899999999999999999999999864211000 000000000000011
Q ss_pred hhhhchhhhc---CCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHhhcccC
Q 006982 538 QDAIDKCLVA---KGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAIGERYH 591 (623)
Q Consensus 538 ~~~~d~~l~~---~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~L~~i~~~~~ 591 (623)
.+.++..... ...+.+ +.+++..|+. .||++|||++|+++.|+++.+++.
T Consensus 261 ~~~~~~~~~~~~~~~~~~~---l~~li~~~l~-~dP~~Rps~~ell~~L~~l~~~~~ 313 (318)
T 3lxp_A 261 TELLERGERLPRPDKCPAE---VYHLMKNCWE-TEASFRPTFENLIPILKTVHEKYQ 313 (318)
T ss_dssp HHHHHTTCCCCCCTTCCHH---HHHHHHHHTC-SSGGGSCCHHHHHHHHHHHHHHHH
T ss_pred HHHHhcccCCCCCccccHH---HHHHHHHHcC-CCcccCcCHHHHHHHHHHHHHhhc
Confidence 1111111111 112333 4455557777 999999999999999999987764
No 89
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=100.00 E-value=6.5e-39 Score=332.23 Aligned_cols=257 Identities=25% Similarity=0.444 Sum_probs=195.0
Q ss_pred ccCcccceeeccCccEEEEEEeC-CCc----EEEEEEeccc--cccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeE
Q 006982 305 NSFSKNNIIGSGRTGTMYKALLE-DGT----SLMVKRLQDS--QRSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLL 377 (623)
Q Consensus 305 ~~f~~~~~lG~G~~g~Vy~~~~~-~~~----~vavK~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 377 (623)
++|...+.||+|+||.||+|... ++. +|++|.+... ....+.+.+|++++.+++||||+++++++.... .++
T Consensus 15 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-~~~ 93 (327)
T 3lzb_A 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQL 93 (327)
T ss_dssp TTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSS-EEE
T ss_pred hHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCC-ceE
Confidence 56888999999999999999954 444 3577777543 345678999999999999999999999998754 789
Q ss_pred EEecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeeccccccc
Q 006982 378 VYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLM 457 (623)
Q Consensus 378 V~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~ 457 (623)
|+||+++|+|.+++... ...+++..++.++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++..
T Consensus 94 v~~~~~~g~L~~~l~~~---~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kL~DfG~a~~~ 167 (327)
T 3lzb_A 94 ITQLMPFGCLLDYVREH---KDNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLL 167 (327)
T ss_dssp EECCCSSCBHHHHHHHT---TTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEETTEEEECCTTC----
T ss_pred EEEecCCCcHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHhhC---CCcCCCCCHHHEEEcCCCCEEEccCcceeEc
Confidence 99999999999999643 24689999999999999999999999 9999999999999999999999999999876
Q ss_pred CCCCCcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCcccccccHHHHHHHHhccCc
Q 006982 458 NPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVT-GERPTNVAKAPETFKGNLVEWIAQLSSTGQ 536 (623)
Q Consensus 458 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~ellt-g~~P~~~~~~~~~~~~~l~~~~~~~~~~~~ 536 (623)
....... ......+|+.|+|||.+.+..++.++||||||+++|||++ |+.||...... .+...+...... .
T Consensus 168 ~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~-----~~~~~~~~~~~~-~ 239 (327)
T 3lzb_A 168 GAEEKEY--HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS-----EISSILEKGERL-P 239 (327)
T ss_dssp --------------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGG-----GHHHHHHTTCCC-C
T ss_pred cCccccc--cccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHH-----HHHHHHHcCCCC-C
Confidence 5432211 1223346889999999999999999999999999999999 99999754321 121211111000 0
Q ss_pred hhhhhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHhhcc
Q 006982 537 LQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAIGER 589 (623)
Q Consensus 537 ~~~~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~L~~i~~~ 589 (623)
.......+ +..++..|+. .||++||++.|+++.|+++...
T Consensus 240 ---------~~~~~~~~---l~~li~~~l~-~dp~~Rps~~ell~~L~~~~~~ 279 (327)
T 3lzb_A 240 ---------QPPICTID---VYMIMRKCWM-IDADSRPKFRELIIEFSKMARD 279 (327)
T ss_dssp ---------CCTTBCHH---HHHHHHHHTC-SSGGGSCCHHHHHHHHHHHHTS
T ss_pred ---------CCccCCHH---HHHHHHHHcC-CChhHCcCHHHHHHHHHHHHhC
Confidence 01112233 4445556776 9999999999999999998654
No 90
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=100.00 E-value=3.6e-39 Score=338.73 Aligned_cols=253 Identities=19% Similarity=0.241 Sum_probs=191.3
Q ss_pred hccCcccceeeccCccEEEEEEeC-CCcEEEEEEeccccccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEEecC
Q 006982 304 TNSFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKHM 382 (623)
Q Consensus 304 ~~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~ 382 (623)
.++|...+.||+|+||.||+++.. +++.||+|++.......+.+.+|+.++++++||||+++++++.+....++||||+
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~ 98 (361)
T 3uc3_A 19 SDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAAIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIMEYA 98 (361)
T ss_dssp TTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTTSCHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECC
T ss_pred CCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCccccHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEEEEeC
Confidence 457888999999999999999975 7899999999776655677899999999999999999999999999999999999
Q ss_pred CCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCC--eEEeecccccccCCC
Q 006982 383 PNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFE--PKISDFGLARLMNPI 460 (623)
Q Consensus 383 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~--~kl~Dfgla~~~~~~ 460 (623)
++|+|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++. +||+|||+++.....
T Consensus 99 ~~~~L~~~l~~----~~~~~~~~~~~i~~ql~~~L~~LH~~---~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~~ 171 (361)
T 3uc3_A 99 SGGELYERICN----AGRFSEDEARFFFQQLLSGVSYCHSM---QICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLH 171 (361)
T ss_dssp CSCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHT---TCCSCCCCGGGEEECSSSSCCEEECCCCCC------
T ss_pred CCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCceEEEeecCcccccccc
Confidence 99999999853 24589999999999999999999999 9999999999999987776 999999999854321
Q ss_pred CCcccccccCCCCcccccCcccccCCCCCcc-hhHHHHHHHHHHHHhCCCCCCCCCCcccccccHHHHHHHHhccCchhh
Q 006982 461 DTHLSTFVNGEFGDLGYVAPEYARTLVATPK-GDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQD 539 (623)
Q Consensus 461 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k-~DV~sfGvil~elltg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 539 (623)
.. .....||+.|+|||++.+..++.+ +|||||||++|||++|+.||........ ....+.........
T Consensus 172 ~~-----~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~----~~~~~~~~~~~~~~-- 240 (361)
T 3uc3_A 172 SQ-----PKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRD----YRKTIQRILSVKYS-- 240 (361)
T ss_dssp --------------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CCC----HHHHHHHHHTTCCC--
T ss_pred CC-----CCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHHH----HHHHHHHHhcCCCC--
Confidence 11 123358999999999988777665 8999999999999999999976443222 22222221111000
Q ss_pred hhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHH
Q 006982 540 AIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQF 582 (623)
Q Consensus 540 ~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~ 582 (623)
+. .......++. .++..|+. .||++|||+.|+++.
T Consensus 241 -~~---~~~~~s~~~~---~li~~~L~-~dP~~Rps~~ell~h 275 (361)
T 3uc3_A 241 -IP---DDIRISPECC---HLISRIFV-ADPATRISIPEIKTH 275 (361)
T ss_dssp -CC---TTSCCCHHHH---HHHHHHSC-SCTTTSCCHHHHHTS
T ss_pred -CC---CcCCCCHHHH---HHHHHHcc-CChhHCcCHHHHHhC
Confidence 00 0011233443 44456666 999999999999875
No 91
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=8.5e-39 Score=324.89 Aligned_cols=258 Identities=22% Similarity=0.374 Sum_probs=201.8
Q ss_pred cCcccc-eeeccCccEEEEEEeC---CCcEEEEEEecccc--ccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEE
Q 006982 306 SFSKNN-IIGSGRTGTMYKALLE---DGTSLMVKRLQDSQ--RSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVY 379 (623)
Q Consensus 306 ~f~~~~-~lG~G~~g~Vy~~~~~---~~~~vavK~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 379 (623)
+|...+ .||+|+||.||+|... ++..||+|+++... ...+.+.+|++++.+++||||+++++++ ..+..++|+
T Consensus 10 ~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~lv~ 88 (287)
T 1u59_A 10 NLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALMLVM 88 (287)
T ss_dssp GEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-ESSSEEEEE
T ss_pred HhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEe-cCCCcEEEE
Confidence 444455 8999999999999853 57889999997643 3456789999999999999999999999 456689999
Q ss_pred ecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCC
Q 006982 380 KHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNP 459 (623)
Q Consensus 380 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~ 459 (623)
||+++|+|.+++... ...+++..++.++.|++.||.|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 89 e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~ 162 (287)
T 1u59_A 89 EMAGGGPLHKFLVGK---REEIPVSNVAELLHQVSMGMKYLEEK---NFVHRDLAARNVLLVNRHYAKISDFGLSKALGA 162 (287)
T ss_dssp ECCTTEEHHHHHTTC---TTTSCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEEETTEEEECCCTTCEECTT
T ss_pred EeCCCCCHHHHHHhC---CccCCHHHHHHHHHHHHHHHHHHHHC---CEeeCCCchheEEEcCCCCEEECcccceeeecc
Confidence 999999999999632 35689999999999999999999999 999999999999999999999999999987754
Q ss_pred CCCcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCcccccccHHHHHHHHhccCchh
Q 006982 460 IDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVT-GERPTNVAKAPETFKGNLVEWIAQLSSTGQLQ 538 (623)
Q Consensus 460 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~ellt-g~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 538 (623)
..... .......+|+.|+|||.+.+..++.++||||||+++|||++ |+.||...... .....+.. ...
T Consensus 163 ~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~-----~~~~~i~~---~~~-- 231 (287)
T 1u59_A 163 DDSYY-TARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGP-----EVMAFIEQ---GKR-- 231 (287)
T ss_dssp CSCEE-CCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTH-----HHHHHHHT---TCC--
T ss_pred Cccee-eccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHH-----HHHHHHhc---CCc--
Confidence 32221 11222346889999999988889999999999999999999 99999754321 11111111 100
Q ss_pred hhhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHhhccc
Q 006982 539 DAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAIGERY 590 (623)
Q Consensus 539 ~~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~L~~i~~~~ 590 (623)
... ....++++ .+++..|+. .+|++||++.|+++.|+++..+.
T Consensus 232 ----~~~-~~~~~~~l---~~li~~~l~-~~p~~Rps~~~l~~~l~~~~~~~ 274 (287)
T 1u59_A 232 ----MEC-PPECPPEL---YALMSDCWI-YKWEDRPDFLTVEQRMRACYYSL 274 (287)
T ss_dssp ----CCC-CTTCCHHH---HHHHHHTTC-SSGGGSCCHHHHHHHHHHHHHHH
T ss_pred ----CCC-CCCcCHHH---HHHHHHHcC-CChhhCcCHHHHHHHHHHHHHhc
Confidence 000 11223344 444556776 99999999999999999986554
No 92
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=7.6e-39 Score=332.58 Aligned_cols=260 Identities=23% Similarity=0.392 Sum_probs=196.7
Q ss_pred ccCcccceeeccCccEEEEEEeCC-----CcEEEEEEecccc--ccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeE
Q 006982 305 NSFSKNNIIGSGRTGTMYKALLED-----GTSLMVKRLQDSQ--RSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLL 377 (623)
Q Consensus 305 ~~f~~~~~lG~G~~g~Vy~~~~~~-----~~~vavK~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 377 (623)
++|...+.||+|+||.||+|.... +..||+|++.... .....+.+|++++.+++||||+++++++.+.+..++
T Consensus 44 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 123 (333)
T 1mqb_A 44 SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMI 123 (333)
T ss_dssp TTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEE
T ss_pred HHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCCcEE
Confidence 456677999999999999998642 2459999997543 334578899999999999999999999999999999
Q ss_pred EEecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeeccccccc
Q 006982 378 VYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLM 457 (623)
Q Consensus 378 V~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~ 457 (623)
||||+++|+|.+++... ...+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++..
T Consensus 124 v~e~~~~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~ 197 (333)
T 1mqb_A 124 ITEYMENGALDKFLREK---DGEFSVLQLVGMLRGIAAGMKYLANM---NYVHRDLAARNILVNSNLVCKVSDFGLSRVL 197 (333)
T ss_dssp EEECCTTEEHHHHHHHT---TTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCCCC----
T ss_pred EEeCCCCCcHHHHHHhC---CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChheEEECCCCcEEECCCCcchhh
Confidence 99999999999999643 25689999999999999999999999 9999999999999999999999999999876
Q ss_pred CCCCCcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCcccccccHHHHHHHHhccCc
Q 006982 458 NPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVT-GERPTNVAKAPETFKGNLVEWIAQLSSTGQ 536 (623)
Q Consensus 458 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~ellt-g~~P~~~~~~~~~~~~~l~~~~~~~~~~~~ 536 (623)
....... .......+|+.|+|||.+.+..++.++||||||+++|||++ |+.||..... .+..........
T Consensus 198 ~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~--------~~~~~~~~~~~~ 268 (333)
T 1mqb_A 198 EDDPEAT-YTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSN--------HEVMKAINDGFR 268 (333)
T ss_dssp --------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCH--------HHHHHHHHTTCC
T ss_pred ccccccc-cccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCH--------HHHHHHHHCCCc
Confidence 5422111 11122346788999999998899999999999999999999 9999964321 111111111100
Q ss_pred hhhhhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHhhccc
Q 006982 537 LQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAIGERY 590 (623)
Q Consensus 537 ~~~~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~L~~i~~~~ 590 (623)
.. .....+++ +.+++..|+. .+|++||++.|+++.|+++....
T Consensus 269 ~~-------~~~~~~~~---l~~li~~~l~-~~p~~Rps~~~l~~~L~~~~~~~ 311 (333)
T 1mqb_A 269 LP-------TPMDCPSA---IYQLMMQCWQ-QERARRPKFADIVSILDKLIRAP 311 (333)
T ss_dssp CC-------CCTTCBHH---HHHHHHHHTC-SSTTTSCCHHHHHHHHHHHHHSG
T ss_pred CC-------CcccCCHH---HHHHHHHHcC-CChhhCcCHHHHHHHHHHHHhcc
Confidence 00 01112333 4445567777 99999999999999999976543
No 93
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=100.00 E-value=2e-38 Score=322.33 Aligned_cols=199 Identities=25% Similarity=0.387 Sum_probs=170.6
Q ss_pred ccCcccceeeccCccEEEEEEeCCCcEEEEEEecccc---ccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEEec
Q 006982 305 NSFSKNNIIGSGRTGTMYKALLEDGTSLMVKRLQDSQ---RSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKH 381 (623)
Q Consensus 305 ~~f~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 381 (623)
++|...+.||+|+||.||+|...+++.||+|++.... .....+.+|++++.+++||||+++++++.+.+..++||||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (288)
T 1ob3_A 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEH 81 (288)
T ss_dssp CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred ccchhhhhcccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEEe
Confidence 4688899999999999999999889999999986543 2346788999999999999999999999999999999999
Q ss_pred CCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCCCC
Q 006982 382 MPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPID 461 (623)
Q Consensus 382 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~~~ 461 (623)
+++ +|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++......
T Consensus 82 ~~~-~l~~~~~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 154 (288)
T 1ob3_A 82 LDQ-DLKKLLDVC---EGGLESVTAKSFLLQLLNGIAYCHDR---RVLHRDLKPQNLLINREGELKIADFGLARAFGIPV 154 (288)
T ss_dssp CSE-EHHHHHHTS---TTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC--
T ss_pred cCC-CHHHHHHhc---ccCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEEeECccccccCccc
Confidence 986 999988643 24689999999999999999999999 99999999999999999999999999998764321
Q ss_pred CcccccccCCCCcccccCcccccC-CCCCcchhHHHHHHHHHHHHhCCCCCCCC
Q 006982 462 THLSTFVNGEFGDLGYVAPEYART-LVATPKGDVYSFGTVLLELVTGERPTNVA 514 (623)
Q Consensus 462 ~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~k~DV~sfGvil~elltg~~P~~~~ 514 (623)
.. .....||+.|+|||++.+ ..++.++|||||||++|||++|+.||...
T Consensus 155 ~~----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~ 204 (288)
T 1ob3_A 155 RK----YTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGV 204 (288)
T ss_dssp -----------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred cc----cccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 11 122347999999999875 45899999999999999999999999753
No 94
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=100.00 E-value=7.4e-39 Score=332.44 Aligned_cols=245 Identities=20% Similarity=0.331 Sum_probs=196.1
Q ss_pred ccCcccceeeccCccEEEEEEe-CCCcEEEEEEecccc----ccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEE
Q 006982 305 NSFSKNNIIGSGRTGTMYKALL-EDGTSLMVKRLQDSQ----RSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVY 379 (623)
Q Consensus 305 ~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~----~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 379 (623)
++|...+.||+|+||.||+|.. .+++.||+|++.... .....+.+|+++++.++||||+++++++.+....++||
T Consensus 9 ~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~ 88 (336)
T 3h4j_B 9 GPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMVI 88 (336)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred CCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 5788899999999999999996 578999999986532 23457889999999999999999999999999999999
Q ss_pred ecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCC
Q 006982 380 KHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNP 459 (623)
Q Consensus 380 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~ 459 (623)
||+ +|+|.+++.. ...+++..+..++.|++.||.|||+. +|+||||||+|||+++++.+||+|||++.....
T Consensus 89 E~~-~g~l~~~l~~----~~~l~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~ 160 (336)
T 3h4j_B 89 EYA-GGELFDYIVE----KKRMTEDEGRRFFQQIICAIEYCHRH---KIVHRDLKPENLLLDDNLNVKIADFGLSNIMTD 160 (336)
T ss_dssp CCC-CEEHHHHHHH----HCSCCHHHHHHHHHHHHHHHHHHHHH---TCCCCCCSTTTEEECTTCCEEECCSSCTBTTTT
T ss_pred ECC-CCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCchhhEEEcCCCCEEEEEeccceeccC
Confidence 999 7899998853 24689999999999999999999999 999999999999999999999999999987654
Q ss_pred CCCcccccccCCCCcccccCcccccCCCC-CcchhHHHHHHHHHHHHhCCCCCCCCCCcccccccHHHHHHHHhccCchh
Q 006982 460 IDTHLSTFVNGEFGDLGYVAPEYARTLVA-TPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQ 538 (623)
Q Consensus 460 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-s~k~DV~sfGvil~elltg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 538 (623)
.. ......||+.|+|||.+.+..+ +.++|||||||++|||++|+.||......+...... .. ..
T Consensus 161 ~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~~~i~---------~~-~~ 225 (336)
T 3h4j_B 161 GN-----FLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLFKKVN---------SC-VY 225 (336)
T ss_dssp SB-----TTCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTTCBCCCC---------SS-CC
T ss_pred Cc-----ccccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHHHHHHHH---------cC-CC
Confidence 22 1233458999999999988776 789999999999999999999997643332211100 00 00
Q ss_pred hhhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHH
Q 006982 539 DAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQF 582 (623)
Q Consensus 539 ~~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~ 582 (623)
. .....+.++. .++..|+. .||.+|||++|+++.
T Consensus 226 -----~-~p~~~s~~~~---~li~~~L~-~dP~~Rpt~~eil~h 259 (336)
T 3h4j_B 226 -----V-MPDFLSPGAQ---SLIRRMIV-ADPMQRITIQEIRRD 259 (336)
T ss_dssp -----C-CCTTSCHHHH---HHHHTTSC-SSGGGSCCHHHHTTC
T ss_pred -----C-CcccCCHHHH---HHHHHHcC-CChhHCcCHHHHHhC
Confidence 0 0111233333 34456666 999999999999764
No 95
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=100.00 E-value=2.2e-38 Score=336.32 Aligned_cols=208 Identities=22% Similarity=0.252 Sum_probs=177.4
Q ss_pred hccCcccceeecc--CccEEEEEEeC-CCcEEEEEEecccc---ccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeE
Q 006982 304 TNSFSKNNIIGSG--RTGTMYKALLE-DGTSLMVKRLQDSQ---RSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLL 377 (623)
Q Consensus 304 ~~~f~~~~~lG~G--~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 377 (623)
.++|...+.||+| +||.||+|... +++.||+|++.... ...+.+.+|++++++++|||||++++++.+.+..++
T Consensus 24 ~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 103 (389)
T 3gni_B 24 GGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWV 103 (389)
T ss_dssp GGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred CCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEEEE
Confidence 3578889999999 99999999976 79999999997543 234567889999999999999999999999999999
Q ss_pred EEecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeeccccccc
Q 006982 378 VYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLM 457 (623)
Q Consensus 378 V~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~ 457 (623)
||||+++|+|.+++.... ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||.+...
T Consensus 104 v~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~NIll~~~~~~kl~dfg~~~~~ 178 (389)
T 3gni_B 104 VTSFMAYGSAKDLICTHF--MDGMNELAIAYILQGVLKALDYIHHM---GYVHRSVKASHILISVDGKVYLSGLRSNLSM 178 (389)
T ss_dssp EEECCTTCBHHHHHHHTC--TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCGGGCEEC
T ss_pred EEEccCCCCHHHHHhhhc--ccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEcccccceee
Confidence 999999999999996542 24589999999999999999999999 9999999999999999999999999998754
Q ss_pred CCCCC---cccccccCCCCcccccCcccccC--CCCCcchhHHHHHHHHHHHHhCCCCCCCCCC
Q 006982 458 NPIDT---HLSTFVNGEFGDLGYVAPEYART--LVATPKGDVYSFGTVLLELVTGERPTNVAKA 516 (623)
Q Consensus 458 ~~~~~---~~~~~~~~~~gt~~y~aPE~~~~--~~~s~k~DV~sfGvil~elltg~~P~~~~~~ 516 (623)
..... ..........||+.|+|||++.+ ..++.++|||||||++|||++|+.||.....
T Consensus 179 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~ 242 (389)
T 3gni_B 179 ISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPA 242 (389)
T ss_dssp EETTEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCS
T ss_pred ccccccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCH
Confidence 32111 11111223458999999999987 6789999999999999999999999976544
No 96
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=100.00 E-value=8.7e-39 Score=328.51 Aligned_cols=264 Identities=20% Similarity=0.316 Sum_probs=196.9
Q ss_pred hccCcccceeeccCccEEEEEEe-CCCcEEEEEEeccc----cccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEE
Q 006982 304 TNSFSKNNIIGSGRTGTMYKALL-EDGTSLMVKRLQDS----QRSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLV 378 (623)
Q Consensus 304 ~~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~----~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV 378 (623)
.++|...+.||+|+||.||+|.. .++..||+|++... ......+.+|++++.+++||||+++++++...+..++|
T Consensus 31 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv 110 (310)
T 2wqm_A 31 LANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIV 110 (310)
T ss_dssp GGGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEE
T ss_pred ccceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEEE
Confidence 35788899999999999999996 57899999998742 23456788999999999999999999999999999999
Q ss_pred EecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccC
Q 006982 379 YKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMN 458 (623)
Q Consensus 379 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~ 458 (623)
|||+++|+|.+++.........+++..++.++.|++.||.|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 111 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~~ 187 (310)
T 2wqm_A 111 LELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSR---RVMHRDIKPANVFITATGVVKLGDLGLGRFFS 187 (310)
T ss_dssp EECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCC-------
T ss_pred EecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCcHHHEEEcCCCCEEEEeccceeeec
Confidence 999999999999864322345689999999999999999999999 99999999999999999999999999998764
Q ss_pred CCCCcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCcccccccHHHHHHHHhccCchh
Q 006982 459 PIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQ 538 (623)
Q Consensus 459 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 538 (623)
..... .....|++.|+|||.+.+..++.++||||||+++|||++|+.||..... ............ ..
T Consensus 188 ~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~------~~~~~~~~~~~~-~~- 255 (310)
T 2wqm_A 188 SKTTA----AHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKM------NLYSLCKKIEQC-DY- 255 (310)
T ss_dssp ---------------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---C------CHHHHHHHHHTT-CS-
T ss_pred CCCcc----ccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccch------hHHHHHHHhhcc-cC-
Confidence 32211 1223488999999999998999999999999999999999999964321 111222111110 00
Q ss_pred hhhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHhhccc
Q 006982 539 DAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAIGERY 590 (623)
Q Consensus 539 ~~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~L~~i~~~~ 590 (623)
+.+.....++++. +++..|+. .||++|||+.+|++.|+++....
T Consensus 256 ----~~~~~~~~~~~l~---~li~~~l~-~dp~~Rps~~~il~~l~~l~~~~ 299 (310)
T 2wqm_A 256 ----PPLPSDHYSEELR---QLVNMCIN-PDPEKRPDVTYVYDVAKRMHACT 299 (310)
T ss_dssp ----CCCCTTTSCHHHH---HHHHHHTC-SSGGGSCCHHHHHHHHHHHHHHH
T ss_pred ----CCCcccccCHHHH---HHHHHHcC-CChhhCCCHHHHHHHHHHHHHhh
Confidence 0011112334444 44456776 99999999999999999987654
No 97
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=100.00 E-value=1.8e-38 Score=331.05 Aligned_cols=199 Identities=18% Similarity=0.248 Sum_probs=174.2
Q ss_pred ccCcccceeeccCccEEEEEEeC-CCcEEEEEEecccc----ccHHHHHHHHHHhCCC-CCCCCcceeEEEEeCCeeeEE
Q 006982 305 NSFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQ----RSEKEFVAEMATLGSV-KNRNLVPLLGFCMAKKERLLV 378 (623)
Q Consensus 305 ~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lV 378 (623)
++|...+.||+|+||.||+++.+ +++.||+|++.... .....+.+|..++.++ +||||+++++++.+.+..++|
T Consensus 9 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv 88 (345)
T 3a8x_A 9 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFV 88 (345)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEEE
Confidence 56888999999999999999975 58899999997543 2345678899999887 899999999999999999999
Q ss_pred EecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccC
Q 006982 379 YKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMN 458 (623)
Q Consensus 379 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~ 458 (623)
|||+++|+|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++...
T Consensus 89 ~e~~~gg~L~~~l~~----~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~ 161 (345)
T 3a8x_A 89 IEYVNGGDLMFHMQR----QRKLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGL 161 (345)
T ss_dssp ECCCCSCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCGGGCBCSC
T ss_pred EeCCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEECCCCCEEEEecccccccc
Confidence 999999999999963 24689999999999999999999999 99999999999999999999999999998643
Q ss_pred CCCCcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCC
Q 006982 459 PIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVA 514 (623)
Q Consensus 459 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~~ 514 (623)
..... .....||+.|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 162 ~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~ 213 (345)
T 3a8x_A 162 RPGDT----TSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIV 213 (345)
T ss_dssp CTTCC----BCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTT
T ss_pred CCCCc----ccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCc
Confidence 22211 22345899999999999999999999999999999999999999753
No 98
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=100.00 E-value=1.2e-38 Score=332.75 Aligned_cols=267 Identities=18% Similarity=0.238 Sum_probs=196.7
Q ss_pred ccCcccceeeccCccEEEEEEeC----CCcEEEEEEeccccc------------cHHHHHHHHHHhCCCCCCCCcceeEE
Q 006982 305 NSFSKNNIIGSGRTGTMYKALLE----DGTSLMVKRLQDSQR------------SEKEFVAEMATLGSVKNRNLVPLLGF 368 (623)
Q Consensus 305 ~~f~~~~~lG~G~~g~Vy~~~~~----~~~~vavK~~~~~~~------------~~~~~~~e~~~l~~l~h~niv~l~~~ 368 (623)
++|...+.||+|+||.||+|... ++..+|+|++..... ....+.+|+..+..++||||++++++
T Consensus 37 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~~ 116 (345)
T 2v62_A 37 NQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYGS 116 (345)
T ss_dssp CEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEEE
T ss_pred ceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeecc
Confidence 57888999999999999999975 577899999865421 12346678899999999999999999
Q ss_pred EEe----CCeeeEEEecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCC
Q 006982 369 CMA----KKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDF 444 (623)
Q Consensus 369 ~~~----~~~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~ 444 (623)
+.. ....++||||+ +++|.+++... ..+++..++.++.|++.||+|||+. +|+||||||+|||++.++
T Consensus 117 ~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~----~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~ 188 (345)
T 2v62_A 117 GLTEFKGRSYRFMVMERL-GIDLQKISGQN----GTFKKSTVLQLGIRMLDVLEYIHEN---EYVHGDIKAANLLLGYKN 188 (345)
T ss_dssp EEEESSSCEEEEEEEECE-EEEHHHHCBGG----GBCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEESSS
T ss_pred cccccCCCcEEEEEEecc-CCCHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCcCHHHEEEccCC
Confidence 988 67789999999 99999999632 3789999999999999999999999 999999999999999887
Q ss_pred --CeEEeecccccccCCCCCc---ccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCccc
Q 006982 445 --EPKISDFGLARLMNPIDTH---LSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPET 519 (623)
Q Consensus 445 --~~kl~Dfgla~~~~~~~~~---~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~~~~~~~ 519 (623)
.+||+|||+++.+...... .........||+.|+|||++.+..++.++|||||||++|||++|+.||.......
T Consensus 189 ~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~- 267 (345)
T 2v62_A 189 PDQVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKDP- 267 (345)
T ss_dssp TTSEEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTCH-
T ss_pred CCcEEEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCcccccccc-
Confidence 9999999999876432211 1111233468999999999999899999999999999999999999996421110
Q ss_pred ccccHHHHHHHHhccCchhhhhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHhhc
Q 006982 520 FKGNLVEWIAQLSSTGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAIGE 588 (623)
Q Consensus 520 ~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~L~~i~~ 588 (623)
........... ..+...+..+......++++.+++ ..|+. .||++||++++|++.|+++..
T Consensus 268 ---~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~li---~~~l~-~dp~~Rps~~~l~~~L~~~~~ 328 (345)
T 2v62_A 268 ---VAVQTAKTNLL-DELPQSVLKWAPSGSSCCEIAQFL---VCAHS-LAYDEKPNYQALKKILNPHGI 328 (345)
T ss_dssp ---HHHHHHHHHHH-HTTTHHHHHHSCTTSCCHHHHHHH---HHHHT-CCTTCCCCHHHHHHHHCTTCC
T ss_pred ---HHHHHHHHhhc-ccccHHHHhhccccccHHHHHHHH---HHHhh-cCcccCCCHHHHHHHHhccCC
Confidence 01111111110 111222222222223444555554 45666 999999999999999998654
No 99
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=100.00 E-value=4.2e-39 Score=336.70 Aligned_cols=200 Identities=22% Similarity=0.318 Sum_probs=172.5
Q ss_pred hccCcccceeeccCccEEEEEEeC-CCcEEEEEEeccc----cccHHHHHHHHHHhCCC-CCCCCcceeEEEEeCCeeeE
Q 006982 304 TNSFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDS----QRSEKEFVAEMATLGSV-KNRNLVPLLGFCMAKKERLL 377 (623)
Q Consensus 304 ~~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~----~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~l 377 (623)
.++|...+.||+|+||.||+|+.+ +++.||+|+++.. ......+..|.+++..+ +||||+++++++.+.+..++
T Consensus 22 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~l 101 (353)
T 3txo_A 22 IDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLFF 101 (353)
T ss_dssp -CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred hhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEEEE
Confidence 467999999999999999999965 6899999999753 23456678899999887 79999999999999999999
Q ss_pred EEecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeeccccccc
Q 006982 378 VYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLM 457 (623)
Q Consensus 378 V~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~ 457 (623)
||||+++|+|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++..
T Consensus 102 v~E~~~gg~L~~~l~~----~~~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NILl~~~g~ikL~DFG~a~~~ 174 (353)
T 3txo_A 102 VMEFVNGGDLMFHIQK----SRRFDEARARFYAAEIISALMFLHDK---GIIYRDLKLDNVLLDHEGHCKLADFGMCKEG 174 (353)
T ss_dssp EEECCCSCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCS
T ss_pred EEeCCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CCcccCCCHHHEEECCCCCEEEccccceeec
Confidence 9999999999999963 24689999999999999999999999 9999999999999999999999999999864
Q ss_pred CCCCCcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCC
Q 006982 458 NPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVA 514 (623)
Q Consensus 458 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~~ 514 (623)
...... .....||+.|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 175 ~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~ 227 (353)
T 3txo_A 175 ICNGVT----TATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAE 227 (353)
T ss_dssp CC-------------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred ccCCcc----ccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCC
Confidence 332211 22335899999999999888999999999999999999999999753
No 100
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=100.00 E-value=1e-38 Score=330.62 Aligned_cols=260 Identities=27% Similarity=0.443 Sum_probs=201.0
Q ss_pred ccCcccceeeccCccEEEEEEeC-CCcE--EEEEEeccc--cccHHHHHHHHHHhCCC-CCCCCcceeEEEEeCCeeeEE
Q 006982 305 NSFSKNNIIGSGRTGTMYKALLE-DGTS--LMVKRLQDS--QRSEKEFVAEMATLGSV-KNRNLVPLLGFCMAKKERLLV 378 (623)
Q Consensus 305 ~~f~~~~~lG~G~~g~Vy~~~~~-~~~~--vavK~~~~~--~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lV 378 (623)
++|...+.||+|+||.||+|... ++.. +++|.+... ....+.+.+|++++.++ +||||+++++++.+.+..++|
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv 104 (327)
T 1fvr_A 25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLA 104 (327)
T ss_dssp GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEEE
T ss_pred HHccceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceEEE
Confidence 56888999999999999999964 5554 488988653 23445788999999999 999999999999999999999
Q ss_pred EecCCCCCHhhhccCCC------------CCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCe
Q 006982 379 YKHMPNGSLYDLLHPAD------------DTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEP 446 (623)
Q Consensus 379 ~e~~~~gsL~~~l~~~~------------~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~ 446 (623)
|||+++|+|.+++.... .....+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+
T Consensus 105 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~~~~~ 181 (327)
T 1fvr_A 105 IEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGENYVA 181 (327)
T ss_dssp ECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECGGGCE
T ss_pred EecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCccceEEEcCCCeE
Confidence 99999999999997543 2235789999999999999999999999 99999999999999999999
Q ss_pred EEeecccccccCCCCCcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCcccccccHH
Q 006982 447 KISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVT-GERPTNVAKAPETFKGNLV 525 (623)
Q Consensus 447 kl~Dfgla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~ellt-g~~P~~~~~~~~~~~~~l~ 525 (623)
||+|||+++....... .....+++.|+|||++.+..++.++||||||+++|||++ |+.||..... .
T Consensus 182 kL~Dfg~~~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~--------~ 248 (327)
T 1fvr_A 182 KIADFGLSRGQEVYVK-----KTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTC--------A 248 (327)
T ss_dssp EECCTTCEESSCEECC-----C----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCH--------H
T ss_pred EEcccCcCcccccccc-----ccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCcH--------H
Confidence 9999999975432111 112236789999999988889999999999999999998 9999965321 1
Q ss_pred HHHHHHhccCchhhhhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHhhcccC
Q 006982 526 EWIAQLSSTGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAIGERYH 591 (623)
Q Consensus 526 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~L~~i~~~~~ 591 (623)
+........... . .....++++ ..++..|+. .||++|||+.|+++.|+++.++..
T Consensus 249 ~~~~~~~~~~~~------~-~~~~~~~~l---~~li~~~l~-~dp~~Rps~~ell~~L~~~~~~~~ 303 (327)
T 1fvr_A 249 ELYEKLPQGYRL------E-KPLNCDDEV---YDLMRQCWR-EKPYERPSFAQILVSLNRMLEERK 303 (327)
T ss_dssp HHHHHGGGTCCC------C-CCTTBCHHH---HHHHHHHTC-SSGGGSCCHHHHHHHHHHHHHSSS
T ss_pred HHHHHhhcCCCC------C-CCCCCCHHH---HHHHHHHcc-CChhhCcCHHHHHHHHHHHHHhhc
Confidence 111111111000 0 001123333 444556776 999999999999999999876653
No 101
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=100.00 E-value=1.1e-38 Score=335.66 Aligned_cols=256 Identities=13% Similarity=0.147 Sum_probs=199.0
Q ss_pred hccCcccceeeccCccEEEEEE------eCCCcEEEEEEeccccccHHHHHHHHHHhCCCC---CCCCcceeEEEEeCCe
Q 006982 304 TNSFSKNNIIGSGRTGTMYKAL------LEDGTSLMVKRLQDSQRSEKEFVAEMATLGSVK---NRNLVPLLGFCMAKKE 374 (623)
Q Consensus 304 ~~~f~~~~~lG~G~~g~Vy~~~------~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~---h~niv~l~~~~~~~~~ 374 (623)
.++|...+.||+|+||.||+|. ..+++.||+|++... ...++..|++++.+++ |+|++++++++...+.
T Consensus 64 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~~~~ 141 (365)
T 3e7e_A 64 SKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPA--NPWEFYIGTQLMERLKPSMQHMFMKFYSAHLFQNG 141 (365)
T ss_dssp SSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSC--CHHHHHHHHHHHHHSCGGGGGGBCCEEEEEECSSC
T ss_pred CEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCC--ChhHHHHHHHHHHHhhhhhhhhhhhhheeeecCCC
Confidence 4678889999999999999994 456889999999754 3456667777766665 9999999999999999
Q ss_pred eeEEEecCCCCCHhhhccCCCC-CCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCC-----------
Q 006982 375 RLLVYKHMPNGSLYDLLHPADD-TGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDD----------- 442 (623)
Q Consensus 375 ~~lV~e~~~~gsL~~~l~~~~~-~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~----------- 442 (623)
.++||||+++|+|.+++..... ....++|..++.++.|++.||+|||+. +|+||||||+|||++.
T Consensus 142 ~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~---~ivHrDiKp~NIll~~~~~~~~~~~~~ 218 (365)
T 3e7e_A 142 SVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDC---EIIHGDIKPDNFILGNGFLEQDDEDDL 218 (365)
T ss_dssp EEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECGGGTCC------
T ss_pred cEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhC---CeecCCCCHHHEEecccccCccccccc
Confidence 9999999999999999964221 235699999999999999999999999 9999999999999998
Q ss_pred CCCeEEeecccccccCCCCCcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCcccccc
Q 006982 443 DFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKG 522 (623)
Q Consensus 443 ~~~~kl~Dfgla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~~~~~~~~~~ 522 (623)
++.+||+|||+++.+..... ........||++|+|||++.+..++.++|||||||++|||+||+.||........
T Consensus 219 ~~~~kl~DFG~a~~~~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~--- 293 (365)
T 3e7e_A 219 SAGLALIDLGQSIDMKLFPK--GTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGGEC--- 293 (365)
T ss_dssp CTTEEECCCTTCEEGGGSCT--TEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEEETTEE---
T ss_pred cCCEEEeeCchhhhhhccCC--CceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccccCCCCce---
Confidence 89999999999976532111 1222345689999999999999999999999999999999999999854221100
Q ss_pred cHHHHHHHHhccCchhhhhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCC-CCHHHHHHHHHHhhccc
Q 006982 523 NLVEWIAQLSSTGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKER-PTMFEVYQFLRAIGERY 590 (623)
Q Consensus 523 ~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~R-Ps~~ev~~~L~~i~~~~ 590 (623)
. +...+......+.+..+++.++ . .+|.+| |+++++.+.|+++.++.
T Consensus 294 -------------~----~~~~~~~~~~~~~~~~~~~~~l---~-~~p~~r~~~~~~l~~~l~~~l~~~ 341 (365)
T 3e7e_A 294 -------------K----PEGLFRRLPHLDMWNEFFHVML---N-IPDCHHLPSLDLLRQKLKKVFQQH 341 (365)
T ss_dssp -------------E----ECSCCTTCSSHHHHHHHHHHHH---C-CCCTTCCCCHHHHHHHHHHHHHHH
T ss_pred -------------e----echhccccCcHHHHHHHHHHHc---C-CCCCCcchHHHHHHHHHHHHHHHh
Confidence 0 1111111123445555555433 3 667777 78999999999876654
No 102
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=100.00 E-value=1.1e-38 Score=328.18 Aligned_cols=265 Identities=23% Similarity=0.351 Sum_probs=194.8
Q ss_pred HHhccCcccceeeccCccEEEEEEeC----CCcEEEEEEecccc---ccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCe
Q 006982 302 KATNSFSKNNIIGSGRTGTMYKALLE----DGTSLMVKRLQDSQ---RSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKE 374 (623)
Q Consensus 302 ~~~~~f~~~~~lG~G~~g~Vy~~~~~----~~~~vavK~~~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~ 374 (623)
...++|...+.||+|+||.||+|... .+..||+|++.... ...+.+.+|++++.+++||||+++++++.+...
T Consensus 31 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~ 110 (313)
T 3brb_A 31 IDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSS 110 (313)
T ss_dssp CCGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC---
T ss_pred cCHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEeeccc
Confidence 34567888999999999999999854 34579999987543 234678899999999999999999999987653
Q ss_pred -----eeEEEecCCCCCHhhhccCCC--CCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeE
Q 006982 375 -----RLLVYKHMPNGSLYDLLHPAD--DTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPK 447 (623)
Q Consensus 375 -----~~lV~e~~~~gsL~~~l~~~~--~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~k 447 (623)
.++|+||+++|+|.+++.... .....+++..++.++.|++.||.|||+. +|+||||||+||+++.++.+|
T Consensus 111 ~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dikp~NIli~~~~~~k 187 (313)
T 3brb_A 111 QGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNR---NFLHRDLAARNCMLRDDMTVC 187 (313)
T ss_dssp ----CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTT---TCCCCCCSGGGEEECTTSCEE
T ss_pred cCCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCcEE
Confidence 489999999999999984322 2345699999999999999999999999 999999999999999999999
Q ss_pred EeecccccccCCCCCcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCcccccccHHH
Q 006982 448 ISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVT-GERPTNVAKAPETFKGNLVE 526 (623)
Q Consensus 448 l~Dfgla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~ellt-g~~P~~~~~~~~~~~~~l~~ 526 (623)
|+|||+++......... ......+++.|+|||.+.+..++.++||||||+++|||++ |..||...... ....
T Consensus 188 l~Dfg~~~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~-----~~~~ 260 (313)
T 3brb_A 188 VADFGLSKKIYSGDYYR--QGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNH-----EMYD 260 (313)
T ss_dssp ECSCSCC------------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGG-----GHHH
T ss_pred EeecCcceecccccccC--cccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCHH-----HHHH
Confidence 99999998764422111 1122346889999999999999999999999999999999 88888653321 1111
Q ss_pred HHHHHhccCchhhhhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHhhccc
Q 006982 527 WIAQLSSTGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAIGERY 590 (623)
Q Consensus 527 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~L~~i~~~~ 590 (623)
.+...... . ......++ +.+++..|+. .||++|||+.++++.|+++.++.
T Consensus 261 ~~~~~~~~---------~-~~~~~~~~---l~~li~~~l~-~dp~~Rps~~~l~~~L~~l~~~l 310 (313)
T 3brb_A 261 YLLHGHRL---------K-QPEDCLDE---LYEIMYSCWR-TDPLDRPTFSVLRLQLEKLLESL 310 (313)
T ss_dssp HHHTTCCC---------C-CBTTCCHH---HHHHHHHTTC-SSGGGSCCHHHHHHHHHHHHHHC
T ss_pred HHHcCCCC---------C-CCccccHH---HHHHHHHHcC-CChhhCcCHHHHHHHHHHHHHhc
Confidence 11110000 0 00112233 4455567777 99999999999999999987654
No 103
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=100.00 E-value=3.5e-38 Score=331.18 Aligned_cols=251 Identities=20% Similarity=0.274 Sum_probs=197.5
Q ss_pred hccCcccceeeccCccEEEEEEeC-CCcEEEEEEecccc---ccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEE
Q 006982 304 TNSFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQ---RSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVY 379 (623)
Q Consensus 304 ~~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 379 (623)
.++|...+.||+|+||.||++... ++..||+|++.... ...+.+.+|++++.+++||||+++++++.+.+..++||
T Consensus 28 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~ 107 (362)
T 2bdw_A 28 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF 107 (362)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred ccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 467999999999999999999965 68999999996543 23456889999999999999999999999999999999
Q ss_pred ecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCC---CCeEEeecccccc
Q 006982 380 KHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDD---FEPKISDFGLARL 456 (623)
Q Consensus 380 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~---~~~kl~Dfgla~~ 456 (623)
||+++|+|.+++.. ...+++..+..++.|++.||.|||+. +|+||||||+|||++.+ +.+||+|||+++.
T Consensus 108 e~~~gg~L~~~l~~----~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~ 180 (362)
T 2bdw_A 108 DLVTGGELFEDIVA----REFYSEADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIE 180 (362)
T ss_dssp CCCCSCBHHHHHTT----CSCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEESCSSTTCCEEECCCTTCBC
T ss_pred ecCCCCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCchHHEEEecCCCCCCEEEeecCcceE
Confidence 99999999999853 35689999999999999999999999 99999999999999865 4599999999987
Q ss_pred cCCCCCcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCcccccccHHHHHHHHhccCc
Q 006982 457 MNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQ 536 (623)
Q Consensus 457 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~ 536 (623)
...... .....||+.|+|||++.+..++.++|||||||++|||++|+.||..... ............
T Consensus 181 ~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~--------~~~~~~i~~~~~ 247 (362)
T 2bdw_A 181 VNDSEA-----WHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQ--------HRLYAQIKAGAY 247 (362)
T ss_dssp CTTCCS-----CCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH--------HHHHHHHHHTCC
T ss_pred ecCCcc-----cccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCH--------HHHHHHHHhCCC
Confidence 653221 1234589999999999998999999999999999999999999975321 111111111000
Q ss_pred hhhhhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHH
Q 006982 537 LQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQF 582 (623)
Q Consensus 537 ~~~~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~ 582 (623)
....+.+ ...++++.+ ++..|+. .||++||++.|+++.
T Consensus 248 --~~~~~~~--~~~~~~~~~---li~~~L~-~dP~~R~t~~e~l~h 285 (362)
T 2bdw_A 248 --DYPSPEW--DTVTPEAKS---LIDSMLT-VNPKKRITADQALKV 285 (362)
T ss_dssp --CCCTTGG--GGSCHHHHH---HHHHHSC-SSGGGSCCHHHHTTS
T ss_pred --CCCcccc--cCCCHHHHH---HHHHHcC-CChhhCcCHHHHhcC
Confidence 0000000 112334444 4445665 999999999998764
No 104
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=100.00 E-value=3.7e-38 Score=339.14 Aligned_cols=253 Identities=18% Similarity=0.220 Sum_probs=197.6
Q ss_pred HhccCcccceeeccCccEEEEEEe-CCCcEEEEEEecccc---ccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEE
Q 006982 303 ATNSFSKNNIIGSGRTGTMYKALL-EDGTSLMVKRLQDSQ---RSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLV 378 (623)
Q Consensus 303 ~~~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV 378 (623)
..++|...+.||+|+||.||++.. .+|+.+|+|++.... ...+.+.+|++++++++||||+++++++.+.+..++|
T Consensus 9 ~~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv 88 (444)
T 3soa_A 9 FTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLI 88 (444)
T ss_dssp HHHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEEE
T ss_pred ccCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEEE
Confidence 356799999999999999999985 478999999986543 3345688999999999999999999999999999999
Q ss_pred EecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeC---CCCCeEEeeccccc
Q 006982 379 YKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLD---DDFEPKISDFGLAR 455 (623)
Q Consensus 379 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~---~~~~~kl~Dfgla~ 455 (623)
|||+++|+|.+.+.. ...+++..+..++.|++.||.|||+. +|+||||||+|||++ +++.+||+|||+++
T Consensus 89 ~E~~~gg~L~~~i~~----~~~~~e~~~~~i~~qil~aL~~lH~~---givHrDlKp~NIll~~~~~~~~vkL~DFG~a~ 161 (444)
T 3soa_A 89 FDLVTGGELFEDIVA----REYYSEADASHCIQQILEAVLHCHQM---GVVHRNLKPENLLLASKLKGAAVKLADFGLAI 161 (444)
T ss_dssp ECCCBCCBHHHHHHH----CSCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSSTTEEESBSSTTCCEEECCCSSCB
T ss_pred EEeCCCCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEeccCCCCcEEEccCceeE
Confidence 999999999999863 34689999999999999999999999 999999999999998 56889999999998
Q ss_pred ccCCCCCcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCcccccccHHHHHHHHhccC
Q 006982 456 LMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTG 535 (623)
Q Consensus 456 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~~~~~~~~~~~l~~~~~~~~~~~ 535 (623)
........ ..+..||+.|+|||++.+..++.++||||+||++|||++|+.||..... .+.........
T Consensus 162 ~~~~~~~~----~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~~--------~~~~~~i~~~~ 229 (444)
T 3soa_A 162 EVEGEQQA----WFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQ--------HRLYQQIKAGA 229 (444)
T ss_dssp CCCTTCCB----CCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSSH--------HHHHHHHHHTC
T ss_pred EecCCCce----eecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCccH--------HHHHHHHHhCC
Confidence 76543221 1234589999999999998999999999999999999999999965321 11111111100
Q ss_pred chhhhhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHH
Q 006982 536 QLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQF 582 (623)
Q Consensus 536 ~~~~~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~ 582 (623)
. +...+. ....++++.+++ ..|+. .||++|||+.|+++.
T Consensus 230 ~--~~~~~~--~~~~s~~~~~li---~~~L~-~dP~~Rpta~e~L~h 268 (444)
T 3soa_A 230 Y--DFPSPE--WDTVTPEAKDLI---NKMLT-INPSKRITAAEALKH 268 (444)
T ss_dssp C--CCCTTT--TTTSCHHHHHHH---HHHSC-SSTTTSCCHHHHHHS
T ss_pred C--CCCccc--cccCCHHHHHHH---HHHcC-CChhHCCCHHHHhcC
Confidence 0 000010 012334444444 45665 999999999999863
No 105
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=2.6e-38 Score=329.97 Aligned_cols=263 Identities=20% Similarity=0.208 Sum_probs=196.2
Q ss_pred HHHHhccCcccceeeccCccEEEEEEeC-CCcEEEEEEeccc------cccHHHHHHHHHHhCCCCCCCCcceeEEEEeC
Q 006982 300 LMKATNSFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDS------QRSEKEFVAEMATLGSVKNRNLVPLLGFCMAK 372 (623)
Q Consensus 300 l~~~~~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~------~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~ 372 (623)
+....++|...+.||+|+||.||+|... ++..||+|++... ....+.+.+|++++.+++||||+++++++.+.
T Consensus 21 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~ 100 (345)
T 3hko_A 21 LLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDE 100 (345)
T ss_dssp HHHHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECS
T ss_pred hhhhhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccC
Confidence 3455678999999999999999999964 6889999998643 23456789999999999999999999999999
Q ss_pred CeeeEEEecCCCCCHhhhccCCCC------------------------------------CCCccChHHHHHHHHHHHHH
Q 006982 373 KERLLVYKHMPNGSLYDLLHPADD------------------------------------TGKSVDWPRRLKIAIGAARG 416 (623)
Q Consensus 373 ~~~~lV~e~~~~gsL~~~l~~~~~------------------------------------~~~~l~~~~~~~i~~~ia~~ 416 (623)
+..++||||+++|+|.+++..... ....+++..+..++.|++.|
T Consensus 101 ~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~ 180 (345)
T 3hko_A 101 QYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSA 180 (345)
T ss_dssp SEEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHH
T ss_pred CeEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHH
Confidence 999999999999999999852100 01234677788999999999
Q ss_pred HHHHHhcCCCCcEecCCCCCceeeCCCC--CeEEeecccccccCCCCCcccccccCCCCcccccCcccccC--CCCCcch
Q 006982 417 FAWLHHNCNPRIIHRNISSKCILLDDDF--EPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYART--LVATPKG 492 (623)
Q Consensus 417 l~yLH~~~~~~i~H~dlk~~NILl~~~~--~~kl~Dfgla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~s~k~ 492 (623)
|+|||+. +|+||||||+||+++.++ .+||+|||+++.................||+.|+|||.+.+ ..++.++
T Consensus 181 l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~ 257 (345)
T 3hko_A 181 LHYLHNQ---GICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKC 257 (345)
T ss_dssp HHHHHHT---TEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCTHH
T ss_pred HHHHHHC---CccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCcHH
Confidence 9999999 999999999999998776 89999999998764322222222234458999999999865 6789999
Q ss_pred hHHHHHHHHHHHHhCCCCCCCCCCcccccccHHHHHHHHhccCchhhhhchhhhcCCCHHHHHHHHHHHhhccCCCCCCC
Q 006982 493 DVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKE 572 (623)
Q Consensus 493 DV~sfGvil~elltg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~ 572 (623)
||||||+++|||++|+.||...... +........... ...+.. ...++++. .++..|+. .||++
T Consensus 258 DiwslG~il~el~~g~~pf~~~~~~--------~~~~~~~~~~~~--~~~~~~--~~~~~~~~---~li~~~l~-~~p~~ 321 (345)
T 3hko_A 258 DAWSAGVLLHLLLMGAVPFPGVNDA--------DTISQVLNKKLC--FENPNY--NVLSPLAR---DLLSNLLN-RNVDE 321 (345)
T ss_dssp HHHHHHHHHHHHHHSSCSSCCSSHH--------HHHHHHHHCCCC--TTSGGG--GGSCHHHH---HHHHHHSC-SCTTT
T ss_pred HHHHHHHHHHHHHHCCCCCCCCChH--------HHHHHHHhcccc--cCCccc--ccCCHHHH---HHHHHHcC-CChhH
Confidence 9999999999999999999753221 111111111000 000000 01233333 44456666 99999
Q ss_pred CCCHHHHHH
Q 006982 573 RPTMFEVYQ 581 (623)
Q Consensus 573 RPs~~ev~~ 581 (623)
||++.|+++
T Consensus 322 Rps~~~~l~ 330 (345)
T 3hko_A 322 RFDAMRALQ 330 (345)
T ss_dssp SCCHHHHHH
T ss_pred CCCHHHHhc
Confidence 999999987
No 106
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=100.00 E-value=2.2e-39 Score=335.67 Aligned_cols=269 Identities=22% Similarity=0.335 Sum_probs=202.5
Q ss_pred ccCcccceeeccCccEEEEEEe-----CCCcEEEEEEecccc-ccHHHHHHHHHHhCCCCCCCCcceeEEEEe--CCeee
Q 006982 305 NSFSKNNIIGSGRTGTMYKALL-----EDGTSLMVKRLQDSQ-RSEKEFVAEMATLGSVKNRNLVPLLGFCMA--KKERL 376 (623)
Q Consensus 305 ~~f~~~~~lG~G~~g~Vy~~~~-----~~~~~vavK~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~--~~~~~ 376 (623)
++|...+.||+|+||.||++.+ .++..||+|++.... ...+.+.+|++++.+++||||+++++++.. ....+
T Consensus 23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 102 (327)
T 3lxl_A 23 RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLR 102 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCEEE
T ss_pred hhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCceEE
Confidence 5688889999999999999984 468899999997653 345678999999999999999999999874 45678
Q ss_pred EEEecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccc
Q 006982 377 LVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARL 456 (623)
Q Consensus 377 lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~ 456 (623)
+||||+++|+|.+++... ...+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.
T Consensus 103 lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~ 176 (327)
T 3lxl_A 103 LVMEYLPSGCLRDFLQRH---RARLDASRLLLYSSQICKGMEYLGSR---RCVHRDLAARNILVESEAHVKIADFGLAKL 176 (327)
T ss_dssp EEEECCTTCBHHHHHHHH---GGGCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCGGGCEE
T ss_pred EEEeecCCCCHHHHHHhc---ccCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCChhhEEECCCCCEEEccccccee
Confidence 999999999999999632 24589999999999999999999999 999999999999999999999999999987
Q ss_pred cCCCCCcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCcccccccHHHHHHHHhc---
Q 006982 457 MNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSS--- 533 (623)
Q Consensus 457 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~~~~~~~~~~~l~~~~~~~~~--- 533 (623)
....... ........+|..|+|||++.+..++.++||||||+++|||++|+.||...... .......
T Consensus 177 ~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~---------~~~~~~~~~~ 246 (327)
T 3lxl_A 177 LPLDKDY-YVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAE---------FLRMMGCERD 246 (327)
T ss_dssp CCTTCSE-EECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHH---------HHHHCC----
T ss_pred cccCCcc-ceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccch---------hhhhcccccc
Confidence 6543221 11223345788899999999888999999999999999999999998642110 0000000
Q ss_pred cCc---hhhhhchhhh---cCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHhhcccCCC
Q 006982 534 TGQ---LQDAIDKCLV---AKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAIGERYHFT 593 (623)
Q Consensus 534 ~~~---~~~~~d~~l~---~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~L~~i~~~~~~~ 593 (623)
... +.+.+..... ....++++ .+++..|+. .||++|||+.|+++.|+.+.......
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~l---~~li~~~l~-~dP~~Rps~~ell~~L~~~~~~~~~~ 308 (327)
T 3lxl_A 247 VPALSRLLELLEEGQRLPAPPACPAEV---HELMKLCWA-PSPQDRPSFSALGPQLDMLWSGSRGC 308 (327)
T ss_dssp CCHHHHHHHHHHTTCCCCCCTTCCHHH---HHHHHHHTC-SSGGGSCCHHHHHHHHHHC-------
T ss_pred cccHHHHHHHhhcccCCCCCCcccHHH---HHHHHHHcC-CChhhCcCHHHHHHHHHHHHhhhcCc
Confidence 000 1111111111 11123344 445556776 99999999999999999986655433
No 107
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=100.00 E-value=5.2e-39 Score=336.44 Aligned_cols=273 Identities=16% Similarity=0.229 Sum_probs=207.4
Q ss_pred ccCcccceeeccCccEEEEEEeCC---------CcEEEEEEeccccccHHHHHHHHHHhCCCCCCCCcc-----------
Q 006982 305 NSFSKNNIIGSGRTGTMYKALLED---------GTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRNLVP----------- 364 (623)
Q Consensus 305 ~~f~~~~~lG~G~~g~Vy~~~~~~---------~~~vavK~~~~~~~~~~~~~~e~~~l~~l~h~niv~----------- 364 (623)
++|...+.||+|+||.||+|.... ++.||+|++... +.+.+|++++.+++||||++
T Consensus 42 ~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~----~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 117 (352)
T 2jii_A 42 RQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD----GRLFNEQNFFQRAAKPLQVNKWKKLYSTPLL 117 (352)
T ss_dssp CEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT----STHHHHHHHHHHHCCHHHHHHHHHHTTCTTC
T ss_pred CeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc----chHHHHHHHHHHhcccchhhhhhhhccCCcc
Confidence 578889999999999999999763 788999998654 36778999999999999887
Q ss_pred ----eeEEEEe-CCeeeEEEecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCcee
Q 006982 365 ----LLGFCMA-KKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCIL 439 (623)
Q Consensus 365 ----l~~~~~~-~~~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NIL 439 (623)
+++++.. ....++||||+ +|+|.+++.... ...+++..++.++.|++.||+|||+. +|+||||||+||+
T Consensus 118 ~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~--~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dikp~NIl 191 (352)
T 2jii_A 118 AIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVSP--KHVLSERSVLQVACRLLDALEFLHEN---EYVHGNVTAENIF 191 (352)
T ss_dssp SCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHSG--GGCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCCGGGEE
T ss_pred CccchhhccccCCcEEEEEecCC-CcCHHHHHHhCC--cCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCHHHEE
Confidence 6777776 67889999999 999999997432 25699999999999999999999999 9999999999999
Q ss_pred eCCCC--CeEEeecccccccCCCCCccc---ccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCC
Q 006982 440 LDDDF--EPKISDFGLARLMNPIDTHLS---TFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVA 514 (623)
Q Consensus 440 l~~~~--~~kl~Dfgla~~~~~~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~~ 514 (623)
++.++ .+||+|||+++.......... .......||+.|+|||++.+..++.++||||||+++|||++|+.||...
T Consensus 192 ~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~ 271 (352)
T 2jii_A 192 VDPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPWTNC 271 (352)
T ss_dssp EETTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGG
T ss_pred EcCCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCcccC
Confidence 99998 999999999987654222111 1112346899999999999989999999999999999999999999753
Q ss_pred CCcccccccHHHHHHHHhccCchhhhhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHhhcccCCCC
Q 006982 515 KAPETFKGNLVEWIAQLSSTGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAIGERYHFTT 594 (623)
Q Consensus 515 ~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~L~~i~~~~~~~~ 594 (623)
.... ..+........ .....+.+.+......++++.+++ ..|+. .||++||+++++++.|+++.++.....
T Consensus 272 ~~~~---~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~li---~~~l~-~dp~~Rps~~~l~~~L~~~~~~~~~~~ 342 (352)
T 2jii_A 272 LPNT---EDIMKQKQKFV--DKPGPFVGPCGHWIRPSETLQKYL---KVVMA-LTYEEKPPYAMLRNNLEALLQDLRVSP 342 (352)
T ss_dssp TTCH---HHHHHHHHHHH--HSCCCEECTTSCEECCCHHHHHHH---HHHHT-CCTTCCCCHHHHHHHHHHHHHHTTCCT
T ss_pred CcCH---HHHHHHHHhcc--CChhhhhhhccccCCCcHHHHHHH---HHHHh-CChhhCCCHHHHHHHHHHHHHhcCCCc
Confidence 3111 11111111111 111222222222223345555554 45666 999999999999999999988776554
Q ss_pred Cc
Q 006982 595 ED 596 (623)
Q Consensus 595 ~~ 596 (623)
.+
T Consensus 343 ~~ 344 (352)
T 2jii_A 343 YD 344 (352)
T ss_dssp TS
T ss_pred Cc
Confidence 33
No 108
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=100.00 E-value=3.1e-38 Score=333.13 Aligned_cols=248 Identities=19% Similarity=0.263 Sum_probs=195.7
Q ss_pred ccCcccceeeccCccEEEEEEeC-CCcEEEEEEecccc----ccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEE
Q 006982 305 NSFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQ----RSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVY 379 (623)
Q Consensus 305 ~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 379 (623)
++|...+.||+|+||.||++... +++.||+|++.... .....+.+|++++.+++|||||++++++.+.+..++||
T Consensus 15 ~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lv~ 94 (384)
T 4fr4_A 15 DHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVV 94 (384)
T ss_dssp GGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEE
Confidence 56888999999999999999965 58899999986532 34567889999999999999999999999999999999
Q ss_pred ecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCC
Q 006982 380 KHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNP 459 (623)
Q Consensus 380 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~ 459 (623)
||+++|+|.+++.. ...+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|||+++....
T Consensus 95 e~~~gg~L~~~l~~----~~~l~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~ 167 (384)
T 4fr4_A 95 DLLLGGDLRYHLQQ----NVHFKEETVKLFICELVMALDYLQNQ---RIIHRDMKPDNILLDEHGHVHITDFNIAAMLPR 167 (384)
T ss_dssp CCCTTEEHHHHHHT----TCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECCT
T ss_pred ecCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCcHHHeEECCCCCEEEeccceeeeccC
Confidence 99999999999963 35689999999999999999999999 999999999999999999999999999987653
Q ss_pred CCCcccccccCCCCcccccCcccccC---CCCCcchhHHHHHHHHHHHHhCCCCCCCCCCcccccccHHHHHHHHhccCc
Q 006982 460 IDTHLSTFVNGEFGDLGYVAPEYART---LVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQ 536 (623)
Q Consensus 460 ~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~s~k~DV~sfGvil~elltg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~ 536 (623)
... .....||+.|+|||++.. ..++.++|||||||++|||++|+.||...... ..............
T Consensus 168 ~~~-----~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~-----~~~~~~~~~~~~~~ 237 (384)
T 4fr4_A 168 ETQ-----ITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSST-----SSKEIVHTFETTVV 237 (384)
T ss_dssp TCC-----BCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTS-----CHHHHHHHHHHCCC
T ss_pred CCc-----eeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCc-----cHHHHHHHHhhccc
Confidence 221 223458999999999874 45899999999999999999999999753321 11111111110000
Q ss_pred hhhhhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCC-HHHHHH
Q 006982 537 LQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPT-MFEVYQ 581 (623)
Q Consensus 537 ~~~~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs-~~ev~~ 581 (623)
. .....+.++..+ +..|+. .||++||+ ++++.+
T Consensus 238 -------~-~p~~~s~~~~~l---i~~lL~-~dP~~R~s~~~~l~~ 271 (384)
T 4fr4_A 238 -------T-YPSAWSQEMVSL---LKKLLE-PNPDQRFSQLSDVQN 271 (384)
T ss_dssp -------C-CCTTSCHHHHHH---HHHHSC-SSGGGSCCSHHHHHT
T ss_pred -------C-CCCcCCHHHHHH---HHHHhc-CCHhHhcccHHHHHc
Confidence 0 011123344444 445665 99999998 666654
No 109
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=100.00 E-value=8.9e-39 Score=329.40 Aligned_cols=267 Identities=19% Similarity=0.267 Sum_probs=199.9
Q ss_pred hccCcccceeeccCccEEEEEEe-CCCcEEEEEEeccc-cccHHHHHHHHHHhCCCCCCCCcceeEEEEe----CCeeeE
Q 006982 304 TNSFSKNNIIGSGRTGTMYKALL-EDGTSLMVKRLQDS-QRSEKEFVAEMATLGSVKNRNLVPLLGFCMA----KKERLL 377 (623)
Q Consensus 304 ~~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~----~~~~~l 377 (623)
.++|...+.||+|+||.||++.. .+++.||+|++... ....+.+.+|++++.+++||||+++++++.. ....++
T Consensus 28 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~l 107 (317)
T 2buj_A 28 NKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWL 107 (317)
T ss_dssp TEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEEEE
T ss_pred CeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCceeEE
Confidence 35788899999999999999996 57899999988653 3445678999999999999999999999873 346789
Q ss_pred EEecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeeccccccc
Q 006982 378 VYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLM 457 (623)
Q Consensus 378 V~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~ 457 (623)
|+||+++|+|.+++......+..+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++...
T Consensus 108 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~dfg~~~~~ 184 (317)
T 2buj_A 108 LLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAK---GYAHRDLKPTNILLGDEGQPVLMDLGSMNQA 184 (317)
T ss_dssp EEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCSSCEES
T ss_pred EEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEcCCCCEEEEecCcchhc
Confidence 9999999999999865433446799999999999999999999999 9999999999999999999999999998765
Q ss_pred CCCCCccc-----ccccCCCCcccccCcccccCCC---CCcchhHHHHHHHHHHHHhCCCCCCCCCCcccccccHHHHHH
Q 006982 458 NPIDTHLS-----TFVNGEFGDLGYVAPEYARTLV---ATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIA 529 (623)
Q Consensus 458 ~~~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~---~s~k~DV~sfGvil~elltg~~P~~~~~~~~~~~~~l~~~~~ 529 (623)
........ .......||+.|+|||.+.... ++.++||||||+++|||++|+.||...... .........
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~---~~~~~~~~~ 261 (317)
T 2buj_A 185 CIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQK---GDSVALAVQ 261 (317)
T ss_dssp CEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHT---TSCHHHHHH
T ss_pred ccccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcc---cchhhHHhh
Confidence 32111000 0011223689999999987543 689999999999999999999998531100 001111111
Q ss_pred HHhccCchhhhhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHhhccc
Q 006982 530 QLSSTGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAIGERY 590 (623)
Q Consensus 530 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~L~~i~~~~ 590 (623)
.... . + .....+.+ +.+++..|+. .||.+|||+.|+++.|+.+....
T Consensus 262 ~~~~------~--~--~~~~~~~~---l~~li~~~l~-~dp~~Rps~~~ll~~L~~~~~~~ 308 (317)
T 2buj_A 262 NQLS------I--P--QSPRHSSA---LWQLLNSMMT-VDPHQRPHIPLLLSQLEALQPPA 308 (317)
T ss_dssp CC--------C--C--CCTTSCHH---HHHHHHHHTC-SSGGGSCCHHHHHHHHHHTCCCC
T ss_pred ccCC------C--C--ccccCCHH---HHHHHHHHhh-cChhhCCCHHHHHHHhhhcCCCC
Confidence 0000 0 0 00112333 4445556776 99999999999999999986544
No 110
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=100.00 E-value=7.4e-39 Score=327.56 Aligned_cols=266 Identities=20% Similarity=0.326 Sum_probs=200.4
Q ss_pred ccCcccceeeccCccEEEEEEe-----CCCcEEEEEEecccc--ccHHHHHHHHHHhCCCCCCCCcceeEEEEeC--Cee
Q 006982 305 NSFSKNNIIGSGRTGTMYKALL-----EDGTSLMVKRLQDSQ--RSEKEFVAEMATLGSVKNRNLVPLLGFCMAK--KER 375 (623)
Q Consensus 305 ~~f~~~~~lG~G~~g~Vy~~~~-----~~~~~vavK~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~ 375 (623)
+.|...+.||+|+||.||+|.+ .+++.||+|++.... .....+.+|++++.+++||||+++++++.+. ...
T Consensus 21 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 100 (302)
T 4e5w_A 21 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGI 100 (302)
T ss_dssp GGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CCE
T ss_pred hhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCceE
Confidence 4578889999999999999983 468899999997543 3457889999999999999999999999876 567
Q ss_pred eEEEecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeeccccc
Q 006982 376 LLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLAR 455 (623)
Q Consensus 376 ~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~ 455 (623)
++||||+++|+|.+++... ...+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++
T Consensus 101 ~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~ 174 (302)
T 4e5w_A 101 KLIMEFLPSGSLKEYLPKN---KNKINLKQQLKYAVQICKGMDYLGSR---QYVHRDLAARNVLVESEHQVKIGDFGLTK 174 (302)
T ss_dssp EEEEECCTTCBHHHHHHHH---TTTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCCTTCE
T ss_pred EEEEEeCCCCcHHHHHHhc---cccCCHHHHHHHHHHHHHHHHHhhcC---CcccCCCchheEEEcCCCCEEECcccccc
Confidence 8999999999999999532 24589999999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCCcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCcccccccHHHHHHHHhccC
Q 006982 456 LMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTG 535 (623)
Q Consensus 456 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~~~~~~~~~~~l~~~~~~~~~~~ 535 (623)
........ ........+|..|+|||.+.+..++.++||||||+++|||++|+.|+..... .............
T Consensus 175 ~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~------~~~~~~~~~~~~~ 247 (302)
T 4e5w_A 175 AIETDKEY-YTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMA------LFLKMIGPTHGQM 247 (302)
T ss_dssp ECCTTCCE-EECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHH------HHHHHHCSCCGGG
T ss_pred cccCCCcc-eeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhh------HHhhccCCccccc
Confidence 76543221 1222334578889999999988899999999999999999999998643110 0000000000000
Q ss_pred chhhhhchh---hh---cCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHhh
Q 006982 536 QLQDAIDKC---LV---AKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAIG 587 (623)
Q Consensus 536 ~~~~~~d~~---l~---~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~L~~i~ 587 (623)
....+.... .. ....+++ +.+++..|+. .||++|||+.|+++.|+++.
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~---l~~li~~~l~-~dp~~Rps~~~ll~~L~~ll 301 (302)
T 4e5w_A 248 TVTRLVNTLKEGKRLPCPPNCPDE---VYQLMRKCWE-FQPSNRTSFQNLIEGFEALL 301 (302)
T ss_dssp HHHHHHHHHHTTCCCCCCTTCCHH---HHHHHHHTTC-SSGGGSCCHHHHHHHHHHHH
T ss_pred CHHHHHHHHhccCCCCCCCCCCHH---HHHHHHHHcC-CCCCCCCCHHHHHHHHHHHh
Confidence 000111000 00 0112333 4455556776 99999999999999999874
No 111
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=100.00 E-value=2.7e-38 Score=322.07 Aligned_cols=198 Identities=22% Similarity=0.328 Sum_probs=169.7
Q ss_pred ccCcccceeeccCccEEEEEEeC-CCcEEEEEEecccc---ccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEEe
Q 006982 305 NSFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQ---RSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYK 380 (623)
Q Consensus 305 ~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e 380 (623)
++|...+.||+|+||+||+|... +++.||+|++.... .....+.+|++++.+++||||+++++++.+.+..++|||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 81 (292)
T 3o0g_A 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE 81 (292)
T ss_dssp CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEEe
Confidence 46888999999999999999965 68999999996533 234678899999999999999999999999999999999
Q ss_pred cCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCCC
Q 006982 381 HMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPI 460 (623)
Q Consensus 381 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~~ 460 (623)
|+++ ++.+.+.. ....+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 82 ~~~~-~l~~~~~~---~~~~l~~~~~~~~~~ql~~~l~~lH~~---~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~ 154 (292)
T 3o0g_A 82 FCDQ-DLKKYFDS---CNGDLDPEIVKSFLFQLLKGLGFCHSR---NVLHRDLKPQNLLINRNGELKLANFGLARAFGIP 154 (292)
T ss_dssp CCSE-EHHHHHHH---TTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECCSC
T ss_pred cCCC-CHHHHHHh---CCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeecccceecCCc
Confidence 9986 55555532 235689999999999999999999999 9999999999999999999999999999876432
Q ss_pred CCcccccccCCCCcccccCcccccCCC-CCcchhHHHHHHHHHHHHhCCCCCCC
Q 006982 461 DTHLSTFVNGEFGDLGYVAPEYARTLV-ATPKGDVYSFGTVLLELVTGERPTNV 513 (623)
Q Consensus 461 ~~~~~~~~~~~~gt~~y~aPE~~~~~~-~s~k~DV~sfGvil~elltg~~P~~~ 513 (623)
... .....||+.|+|||++.+.. ++.++|||||||++|||++|..||..
T Consensus 155 ~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~ 204 (292)
T 3o0g_A 155 VRC----YSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFP 204 (292)
T ss_dssp CSC----CCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCC
T ss_pred ccc----ccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcC
Confidence 221 12345899999999997765 79999999999999999999998654
No 112
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.1e-38 Score=339.50 Aligned_cols=274 Identities=20% Similarity=0.300 Sum_probs=206.0
Q ss_pred ccCcccceeeccCccEEEEEEeC-CCcEEEEEEecccc--ccHHHHHHHHHHhCCCCCCCCcceeEEEEeCC--eeeEEE
Q 006982 305 NSFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQ--RSEKEFVAEMATLGSVKNRNLVPLLGFCMAKK--ERLLVY 379 (623)
Q Consensus 305 ~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~--~~~lV~ 379 (623)
++|...++||+|+||.||+|... +++.||+|++.... ...+.+.+|++++++++||||+++++++.... ..++||
T Consensus 9 ~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~lv~ 88 (396)
T 4eut_A 9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIM 88 (396)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEE
T ss_pred CceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEEEE
Confidence 56888999999999999999976 58999999997543 44677889999999999999999999998765 678999
Q ss_pred ecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceee----CCCCCeEEeeccccc
Q 006982 380 KHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILL----DDDFEPKISDFGLAR 455 (623)
Q Consensus 380 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl----~~~~~~kl~Dfgla~ 455 (623)
||+++|+|.+++..... ...+++..++.++.|++.||+|||+. +|+||||||+|||+ +.++.+||+|||+++
T Consensus 89 e~~~~g~L~~~l~~~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~ 164 (396)
T 4eut_A 89 EFCPCGSLYTVLEEPSN-AYGLPESEFLIVLRDVVGGMNHLREN---GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAR 164 (396)
T ss_dssp CCCTTEEHHHHTTSGGG-TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEECTTSCEEEEECCGGGCE
T ss_pred ecCCCCCHHHHHHhhhc-ccCCCHHHHHHHHHHHHHHHHHHHHC---CEEECCcCHHHEEEeecCCCceeEEEecCCCce
Confidence 99999999999965432 23489999999999999999999999 99999999999999 788889999999998
Q ss_pred ccCCCCCcccccccCCCCcccccCcccccC--------CCCCcchhHHHHHHHHHHHHhCCCCCCCCCCcccccccHHHH
Q 006982 456 LMNPIDTHLSTFVNGEFGDLGYVAPEYART--------LVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEW 527 (623)
Q Consensus 456 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~s~k~DV~sfGvil~elltg~~P~~~~~~~~~~~~~l~~~ 527 (623)
....... .....||+.|+|||++.. ..++.++|||||||++|||++|+.||............+...
T Consensus 165 ~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~ 239 (396)
T 4eut_A 165 ELEDDEQ-----FVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKI 239 (396)
T ss_dssp ECCCGGG-----SSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTCHHHHHHH
T ss_pred EccCCCc-----cccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccchHHHHHHH
Confidence 7654221 123458999999998864 567889999999999999999999997544332222222221
Q ss_pred HHHHhccCc---hhhhhchhh------h-cCCCHHHHHH-HHHHHhhccCCCCCCCCCCHHHHHHHHHHhhcc
Q 006982 528 IAQLSSTGQ---LQDAIDKCL------V-AKGVDNELFQ-FLKVACNCVLPTIPKERPTMFEVYQFLRAIGER 589 (623)
Q Consensus 528 ~~~~~~~~~---~~~~~d~~l------~-~~~~~~~~~~-~~~~~~~C~~~~~P~~RPs~~ev~~~L~~i~~~ 589 (623)
.... .... .......++ . .......+.. +..+...|+. .||++||+++|+++.++++..+
T Consensus 240 ~~~~-p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~-~dP~~R~s~~e~l~~l~~il~~ 310 (396)
T 4eut_A 240 ITGK-PSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILE-ADQEKCWGFDQFFAETSDILHR 310 (396)
T ss_dssp HHSC-CTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSC-CCTTTSCCHHHHHHHHHHHHTC
T ss_pred hcCC-CcccchhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhc-cChhhhccHHHHHHHHHHHhhc
Confidence 1110 0000 000000000 0 0011233333 3445555655 9999999999999999997665
No 113
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=100.00 E-value=6.7e-39 Score=331.07 Aligned_cols=266 Identities=24% Similarity=0.379 Sum_probs=205.9
Q ss_pred HHHhccCcccceeeccCccEEEEEEeC------CCcEEEEEEecccc--ccHHHHHHHHHHhCCCCCCCCcceeEEEEeC
Q 006982 301 MKATNSFSKNNIIGSGRTGTMYKALLE------DGTSLMVKRLQDSQ--RSEKEFVAEMATLGSVKNRNLVPLLGFCMAK 372 (623)
Q Consensus 301 ~~~~~~f~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~ 372 (623)
....++|...+.||+|+||.||+|... ++..||+|.+.... .....+.+|++++.+++||||+++++++.+.
T Consensus 21 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~ 100 (322)
T 1p4o_A 21 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQG 100 (322)
T ss_dssp BCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEECSS
T ss_pred cchhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeEEEEccC
Confidence 344577899999999999999999854 36789999997543 3345688999999999999999999999999
Q ss_pred CeeeEEEecCCCCCHhhhccCCC------CCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCe
Q 006982 373 KERLLVYKHMPNGSLYDLLHPAD------DTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEP 446 (623)
Q Consensus 373 ~~~~lV~e~~~~gsL~~~l~~~~------~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~ 446 (623)
+..++||||+++|+|.+++.... .....+++..++.++.|++.||.|||+. +|+||||||+||+++.++.+
T Consensus 101 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~NIli~~~~~~ 177 (322)
T 1p4o_A 101 QPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTV 177 (322)
T ss_dssp SSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCSGGGEEECTTCCE
T ss_pred CccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHC---CCccCCCccceEEEcCCCeE
Confidence 99999999999999999986421 1124578999999999999999999999 99999999999999999999
Q ss_pred EEeecccccccCCCCCcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCcccccccHH
Q 006982 447 KISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVT-GERPTNVAKAPETFKGNLV 525 (623)
Q Consensus 447 kl~Dfgla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~ellt-g~~P~~~~~~~~~~~~~l~ 525 (623)
||+|||+++........ .......+|+.|+|||.+.+..++.++||||||+++|||++ |+.||..... .
T Consensus 178 kl~Dfg~~~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~--------~ 247 (322)
T 1p4o_A 178 KIGDFGMTRDIYETDYY--RKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSN--------E 247 (322)
T ss_dssp EECCTTCCCGGGGGGCE--EGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCH--------H
T ss_pred EECcCcccccccccccc--ccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccCCH--------H
Confidence 99999999865432211 11222346889999999998889999999999999999999 8888864321 1
Q ss_pred HHHHHHhccCchhhhhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHhhccc
Q 006982 526 EWIAQLSSTGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAIGERY 590 (623)
Q Consensus 526 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~L~~i~~~~ 590 (623)
......... .... .....++++. +++..|+. .||++|||+.|+++.|+++.++.
T Consensus 248 ~~~~~~~~~-~~~~------~~~~~~~~l~---~li~~~l~-~dp~~Rps~~e~l~~L~~~~~~~ 301 (322)
T 1p4o_A 248 QVLRFVMEG-GLLD------KPDNCPDMLF---ELMRMCWQ-YNPKMRPSFLEIISSIKEEMEPG 301 (322)
T ss_dssp HHHHHHHTT-CCCC------CCTTCCHHHH---HHHHHHTC-SSGGGSCCHHHHHHHHGGGSCTT
T ss_pred HHHHHHHcC-CcCC------CCCCCCHHHH---HHHHHHcC-CCcccCcCHHHHHHHHHHhhccC
Confidence 111111111 1000 0112333444 44456766 99999999999999999875543
No 114
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=100.00 E-value=1.4e-38 Score=332.78 Aligned_cols=250 Identities=22% Similarity=0.312 Sum_probs=183.2
Q ss_pred hccCcccceeeccCccEEEEEEeC-CCcEEEEEEeccccccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEEecC
Q 006982 304 TNSFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKHM 382 (623)
Q Consensus 304 ~~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~ 382 (623)
.+.|...+.||+|+||.||+|... +++.||+|++.... ..+.+.+|++++.+++||||+++++++.+.+..++||||+
T Consensus 52 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 130 (349)
T 2w4o_A 52 SDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV-DKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLELV 130 (349)
T ss_dssp GGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC-----------CHHHHHCCCTTBCCEEEEEECSSEEEEEECCC
T ss_pred cCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch-hHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEEEEeC
Confidence 457888999999999999999976 57899999997543 3456889999999999999999999999999999999999
Q ss_pred CCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCC---CCCeEEeecccccccCC
Q 006982 383 PNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDD---DFEPKISDFGLARLMNP 459 (623)
Q Consensus 383 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~---~~~~kl~Dfgla~~~~~ 459 (623)
++|+|.+++.. ...+++..+..++.|++.||.|||+. +|+||||||+|||++. ++.+||+|||+++....
T Consensus 131 ~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~~ 203 (349)
T 2w4o_A 131 TGGELFDRIVE----KGYYSERDAADAVKQILEAVAYLHEN---GIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEH 203 (349)
T ss_dssp CSCBHHHHHTT----CSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEESSSSTTCCEEECCCC-------
T ss_pred CCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCcccEEEecCCCCCCEEEccCccccccCc
Confidence 99999999963 34689999999999999999999999 9999999999999975 88999999999987543
Q ss_pred CCCcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCcccccccHHHHHHHHhccCchhh
Q 006982 460 IDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQD 539 (623)
Q Consensus 460 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 539 (623)
... .....||+.|+|||++.+..++.++|||||||++|||++|+.||....... ........... .
T Consensus 204 ~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~-------~~~~~i~~~~~--~ 269 (349)
T 2w4o_A 204 QVL-----MKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQ-------FMFRRILNCEY--Y 269 (349)
T ss_dssp --------------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCHH-------HHHHHHHTTCC--C
T ss_pred ccc-----cccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCcccH-------HHHHHHHhCCC--c
Confidence 211 123358999999999999899999999999999999999999997533211 01111111100 0
Q ss_pred hhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHH
Q 006982 540 AIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQ 581 (623)
Q Consensus 540 ~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~ 581 (623)
...+.. ...+.++ ..++..|+. .||++|||+.|+++
T Consensus 270 ~~~~~~--~~~~~~~---~~li~~~L~-~dP~~Rpt~~e~l~ 305 (349)
T 2w4o_A 270 FISPWW--DEVSLNA---KDLVRKLIV-LDPKKRLTTFQALQ 305 (349)
T ss_dssp CCTTTT--TTSCHHH---HHHHHTTSC-SSGGGSCCHHHHHH
T ss_pred cCCchh--hhCCHHH---HHHHHHHcc-CChhhCcCHHHHhc
Confidence 000000 1123333 344556776 99999999999876
No 115
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=100.00 E-value=4.5e-39 Score=345.14 Aligned_cols=209 Identities=20% Similarity=0.227 Sum_probs=180.0
Q ss_pred HHHHHHHhccCcccceeeccCccEEEEEEeC-CCcEEEEEEecccc----ccHHHHHHHHHHhCCCCCCCCcceeEEEEe
Q 006982 297 LSDLMKATNSFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQ----RSEKEFVAEMATLGSVKNRNLVPLLGFCMA 371 (623)
Q Consensus 297 ~~~l~~~~~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~e~~~l~~l~h~niv~l~~~~~~ 371 (623)
+.++....++|...++||+|+||.||+|+.. +++.||+|++.... .....+.+|..++..++||||+++++++.+
T Consensus 66 ~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~ 145 (437)
T 4aw2_A 66 VKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQD 145 (437)
T ss_dssp HHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEEC
T ss_pred hhcccCChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEee
Confidence 4455556789999999999999999999976 47889999996532 222347889999999999999999999999
Q ss_pred CCeeeEEEecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeec
Q 006982 372 KKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDF 451 (623)
Q Consensus 372 ~~~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Df 451 (623)
.+..++||||+++|+|.+++... ...+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+||
T Consensus 146 ~~~~~lV~Ey~~gg~L~~~l~~~---~~~l~e~~~~~~~~qi~~aL~~LH~~---giiHrDLKp~NILl~~~g~vkL~DF 219 (437)
T 4aw2_A 146 DNNLYLVMDYYVGGDLLTLLSKF---EDRLPEEMARFYLAEMVIAIDSVHQL---HYVHRDIKPDNILMDMNGHIRLADF 219 (437)
T ss_dssp SSEEEEEECCCTTCBHHHHHHTT---TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCC
T ss_pred CCEEEEEEecCCCCcHHHHHHHc---cCCCCHHHHHHHHHHHHHHHHHHHhC---CeEecccCHHHeeEcCCCCEEEcch
Confidence 99999999999999999999642 35689999999999999999999999 9999999999999999999999999
Q ss_pred ccccccCCCCCcccccccCCCCcccccCccccc-----CCCCCcchhHHHHHHHHHHHHhCCCCCCCC
Q 006982 452 GLARLMNPIDTHLSTFVNGEFGDLGYVAPEYAR-----TLVATPKGDVYSFGTVLLELVTGERPTNVA 514 (623)
Q Consensus 452 gla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~s~k~DV~sfGvil~elltg~~P~~~~ 514 (623)
|+++......... .....||+.|+|||++. ...++.++|||||||++|||++|+.||...
T Consensus 220 Gla~~~~~~~~~~---~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~ 284 (437)
T 4aw2_A 220 GSCLKLMEDGTVQ---SSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAE 284 (437)
T ss_dssp TTCEECCTTSCEE---CCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCS
T ss_pred hhhhhcccCCCcc---cccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCC
Confidence 9998765432221 12345899999999987 567899999999999999999999999753
No 116
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=100.00 E-value=2.6e-38 Score=334.69 Aligned_cols=252 Identities=19% Similarity=0.274 Sum_probs=198.4
Q ss_pred hccCcccceeeccCccEEEEEEeC-CCcEEEEEEecccc-ccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEEec
Q 006982 304 TNSFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQ-RSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKH 381 (623)
Q Consensus 304 ~~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 381 (623)
.+.|...+.||+|+||.||+|... +++.||+|++.... .....+.+|++++.+++||||+++++++.+....++||||
T Consensus 50 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~E~ 129 (387)
T 1kob_A 50 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEF 129 (387)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEEC
T ss_pred ccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEEEEc
Confidence 357899999999999999999965 68899999986543 3445788999999999999999999999999999999999
Q ss_pred CCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCC--CCCeEEeecccccccCC
Q 006982 382 MPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDD--DFEPKISDFGLARLMNP 459 (623)
Q Consensus 382 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~--~~~~kl~Dfgla~~~~~ 459 (623)
+++|+|.+++... ...+++..++.++.|++.||+|||+. +|+||||||+|||++. ++.+||+|||+++....
T Consensus 130 ~~gg~L~~~l~~~---~~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~~ 203 (387)
T 1kob_A 130 LSGGELFDRIAAE---DYKMSEAEVINYMRQACEGLKHMHEH---SIVHLDIKPENIMCETKKASSVKIIDFGLATKLNP 203 (387)
T ss_dssp CCCCBHHHHTTCT---TCCBCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSTTCCCEEECCCTTCEECCT
T ss_pred CCCCcHHHHHHhh---cCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccchHHeEEecCCCCceEEEecccceecCC
Confidence 9999999999632 24689999999999999999999999 9999999999999974 57899999999987654
Q ss_pred CCCcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCcccccccHHHHHHHHhccCchhh
Q 006982 460 IDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQD 539 (623)
Q Consensus 460 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 539 (623)
.... ....||+.|+|||++.+..++.++|||||||++|||++|+.||..... .+...........
T Consensus 204 ~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~--------~~~~~~i~~~~~~-- 268 (387)
T 1kob_A 204 DEIV-----KVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDD--------LETLQNVKRCDWE-- 268 (387)
T ss_dssp TSCE-----EEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSH--------HHHHHHHHHCCCC--
T ss_pred Ccce-----eeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCH--------HHHHHHHHhCCCC--
Confidence 3221 122489999999999999999999999999999999999999975321 1111111111000
Q ss_pred hhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHH
Q 006982 540 AIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQF 582 (623)
Q Consensus 540 ~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~ 582 (623)
.+... ....++++ ..++..|+. .||++|||+.|+++.
T Consensus 269 -~~~~~-~~~~s~~~---~~li~~~L~-~dP~~Rpt~~ell~h 305 (387)
T 1kob_A 269 -FDEDA-FSSVSPEA---KDFIKNLLQ-KEPRKRLTVHDALEH 305 (387)
T ss_dssp -CCSST-TTTSCHHH---HHHHHTTSC-SSGGGSCCHHHHHTS
T ss_pred -CCccc-cccCCHHH---HHHHHHHcC-CChhHCcCHHHHhhC
Confidence 00000 01123333 344556766 999999999999763
No 117
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=100.00 E-value=1.7e-39 Score=345.75 Aligned_cols=259 Identities=18% Similarity=0.216 Sum_probs=201.0
Q ss_pred HHHHHHHhccCcccceeeccCccEEEEEEeC-CCcEEEEEEecccc----ccHHHHHHHHHHhCCCCCCCCcceeEEEEe
Q 006982 297 LSDLMKATNSFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQ----RSEKEFVAEMATLGSVKNRNLVPLLGFCMA 371 (623)
Q Consensus 297 ~~~l~~~~~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~e~~~l~~l~h~niv~l~~~~~~ 371 (623)
+.++....++|...+.||+|+||.||+|+.. +++.||+|++.... .....+.+|++++..++||||+++++++.+
T Consensus 61 ~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~ 140 (410)
T 3v8s_A 61 IRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQD 140 (410)
T ss_dssp HHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEEC
T ss_pred HHhcccCccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEE
Confidence 3445556788999999999999999999975 58899999986532 223457889999999999999999999999
Q ss_pred CCeeeEEEecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeec
Q 006982 372 KKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDF 451 (623)
Q Consensus 372 ~~~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Df 451 (623)
....++||||+++|+|.++++. ..+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+||
T Consensus 141 ~~~~~lV~E~~~gg~L~~~l~~-----~~~~e~~~~~~~~qi~~aL~~LH~~---givHrDLKp~NILl~~~g~ikL~DF 212 (410)
T 3v8s_A 141 DRYLYMVMEYMPGGDLVNLMSN-----YDVPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKSGHLKLADF 212 (410)
T ss_dssp SSEEEEEECCCTTEEHHHHHHH-----CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCC
T ss_pred CCEEEEEEeCCCCCcHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeeECCCCCEEEecc
Confidence 9999999999999999999953 3588999999999999999999999 9999999999999999999999999
Q ss_pred ccccccCCCCCcccccccCCCCcccccCcccccCCC----CCcchhHHHHHHHHHHHHhCCCCCCCCCCcccccccHHHH
Q 006982 452 GLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLV----ATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEW 527 (623)
Q Consensus 452 gla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~----~s~k~DV~sfGvil~elltg~~P~~~~~~~~~~~~~l~~~ 527 (623)
|+++....... .......||+.|+|||++.... ++.++|||||||++|||++|+.||...... ..
T Consensus 213 G~a~~~~~~~~---~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~--------~~ 281 (410)
T 3v8s_A 213 GTCMKMNKEGM---VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLV--------GT 281 (410)
T ss_dssp TTCEECCTTSE---EECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSHH--------HH
T ss_pred ceeEeeccCCc---ccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCChh--------hH
Confidence 99987654321 1123446999999999997655 789999999999999999999999753221 11
Q ss_pred HHHHhccCchhhhhchhhhcCCCHHHHHHHHHHHhhccCCCCCCC--CCCHHHHHHH
Q 006982 528 IAQLSSTGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKE--RPTMFEVYQF 582 (623)
Q Consensus 528 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~--RPs~~ev~~~ 582 (623)
........ ..+.-+ .....++++..+++ .|+. .+|.+ ||+++||++.
T Consensus 282 ~~~i~~~~--~~~~~p--~~~~~s~~~~~li~---~lL~-~~~~rlgR~~~~ei~~H 330 (410)
T 3v8s_A 282 YSKIMNHK--NSLTFP--DDNDISKEAKNLIC---AFLT-DREVRLGRNGVEEIKRH 330 (410)
T ss_dssp HHHHHTHH--HHCCCC--TTCCCCHHHHHHHH---HHSS-CGGGCTTSSCHHHHHTS
T ss_pred HHHHHhcc--ccccCC--CcccccHHHHHHHH---HHcc-ChhhhCCCCCHHHHhcC
Confidence 11111000 000000 01123455555554 4554 67888 9999998864
No 118
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=100.00 E-value=8.1e-39 Score=323.42 Aligned_cols=252 Identities=24% Similarity=0.398 Sum_probs=193.9
Q ss_pred ccCcccceeeccCccEEEEEEeCCCcEEEEEEeccccccHHHHHHHHHHhCCCCCCCCcceeEEEEeC-CeeeEEEecCC
Q 006982 305 NSFSKNNIIGSGRTGTMYKALLEDGTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGFCMAK-KERLLVYKHMP 383 (623)
Q Consensus 305 ~~f~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~-~~~~lV~e~~~ 383 (623)
++|...+.||+|+||.||++... ++.||+|++.... ..+.+.+|++++.+++||||+++++++.+. +..++|+||++
T Consensus 21 ~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~-~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~ 98 (278)
T 1byg_A 21 KELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA-TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMA 98 (278)
T ss_dssp GGEEEEEEEEECSSCEEEEEEET-TEEEEEEECCCCC---HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECCCT
T ss_pred hhceEEeEEecCCCceEEEEEEc-CCEEEEEEecchh-HHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEEEecCC
Confidence 57888999999999999999885 8899999997553 456789999999999999999999997655 46899999999
Q ss_pred CCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCCCCCc
Q 006982 384 NGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTH 463 (623)
Q Consensus 384 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~~~~~ 463 (623)
+|+|.+++.... ...+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++.......
T Consensus 99 ~~~L~~~l~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~-- 171 (278)
T 1byg_A 99 KGSLVDYLRSRG--RSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ-- 171 (278)
T ss_dssp TEEHHHHHHHHH--HHHCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTSCEEECCCCC----------
T ss_pred CCCHHHHHHhcc--cccCCHHHHHHHHHHHHHHHHHHHhC---CccccCCCcceEEEeCCCcEEEeeccccccccccc--
Confidence 999999995321 12378999999999999999999999 99999999999999999999999999998654321
Q ss_pred ccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCcccccccHHHHHHHHhccCchhhhhc
Q 006982 464 LSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVT-GERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAID 542 (623)
Q Consensus 464 ~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~ellt-g~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d 542 (623)
....+++.|+|||.+.+..++.++||||||+++|||++ |+.||...... .... ..... . .
T Consensus 172 -----~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~-----~~~~---~~~~~-~-----~ 232 (278)
T 1byg_A 172 -----DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLK-----DVVP---RVEKG-Y-----K 232 (278)
T ss_dssp ---------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGG-----GHHH---HHTTT-C-----C
T ss_pred -----cCCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCHH-----HHHH---HHhcC-C-----C
Confidence 11236889999999998889999999999999999998 99998753221 1111 11110 0 0
Q ss_pred hhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHhhcc
Q 006982 543 KCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAIGER 589 (623)
Q Consensus 543 ~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~L~~i~~~ 589 (623)
.. .....++++. +++..|+. .||++||++.|+++.|+++...
T Consensus 233 ~~-~~~~~~~~l~---~li~~~l~-~~p~~Rps~~~l~~~L~~i~~~ 274 (278)
T 1byg_A 233 MD-APDGCPPAVY---EVMKNCWH-LDAAMRPSFLQLREQLEHIKTH 274 (278)
T ss_dssp CC-CCTTCCHHHH---HHHHHHTC-SSGGGSCCHHHHHHHHHHHHHH
T ss_pred CC-CcccCCHHHH---HHHHHHhc-CChhhCCCHHHHHHHHHHHHhh
Confidence 00 0112334444 44456776 9999999999999999998754
No 119
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=100.00 E-value=7.9e-39 Score=329.43 Aligned_cols=270 Identities=23% Similarity=0.325 Sum_probs=207.5
Q ss_pred HHHHHHhccCcccceeeccCccEEEEEEe------CCCcEEEEEEecccc--ccHHHHHHHHHHhCCC-CCCCCcceeEE
Q 006982 298 SDLMKATNSFSKNNIIGSGRTGTMYKALL------EDGTSLMVKRLQDSQ--RSEKEFVAEMATLGSV-KNRNLVPLLGF 368 (623)
Q Consensus 298 ~~l~~~~~~f~~~~~lG~G~~g~Vy~~~~------~~~~~vavK~~~~~~--~~~~~~~~e~~~l~~l-~h~niv~l~~~ 368 (623)
.......++|...+.||+|+||.||+|.. .+++.||+|++.... ...+.+.+|++++.++ +||||++++++
T Consensus 20 ~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~ 99 (316)
T 2xir_A 20 SKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGA 99 (316)
T ss_dssp HHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEE
T ss_pred cceecchhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeEEEE
Confidence 34444457899999999999999999984 356889999997643 2345788999999999 78999999999
Q ss_pred EEeCC-eeeEEEecCCCCCHhhhccCCCCC------------CCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCC
Q 006982 369 CMAKK-ERLLVYKHMPNGSLYDLLHPADDT------------GKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISS 435 (623)
Q Consensus 369 ~~~~~-~~~lV~e~~~~gsL~~~l~~~~~~------------~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~ 435 (623)
+...+ ..++|+||+++|+|.+++...... ...+++..++.++.|++.||.|||+. +|+||||||
T Consensus 100 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dikp 176 (316)
T 2xir_A 100 CTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAA 176 (316)
T ss_dssp ECCTTSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSG
T ss_pred EecCCCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhC---CcccccCcc
Confidence 88765 488999999999999999754321 12388999999999999999999999 999999999
Q ss_pred CceeeCCCCCeEEeecccccccCCCCCcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCC
Q 006982 436 KCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVT-GERPTNVA 514 (623)
Q Consensus 436 ~NILl~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~ellt-g~~P~~~~ 514 (623)
+||+++.++.+||+|||+++........ .......+|+.|+|||.+.+..++.++||||||+++|||+| |+.||...
T Consensus 177 ~Nil~~~~~~~kl~Dfg~~~~~~~~~~~--~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~ 254 (316)
T 2xir_A 177 RNILLSEKNVVKICDFGLARDIYKDPDY--VRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGV 254 (316)
T ss_dssp GGEEECGGGCEEECCCGGGSCTTTCTTS--EEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTC
T ss_pred ceEEECCCCCEEECCCccccccccCccc--eeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCccc
Confidence 9999999999999999999876442221 11122346889999999998899999999999999999998 99999754
Q ss_pred CCcccccccHHHHHHHHhccCchhhhhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHhhccc
Q 006982 515 KAPETFKGNLVEWIAQLSSTGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAIGERY 590 (623)
Q Consensus 515 ~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~L~~i~~~~ 590 (623)
...+ .....+.... . .. .......+ +.+++..|+. .||.+|||+.|+++.|+++.+..
T Consensus 255 ~~~~----~~~~~~~~~~---~------~~-~~~~~~~~---l~~li~~~l~-~dp~~Rps~~ell~~L~~~~~~~ 312 (316)
T 2xir_A 255 KIDE----EFCRRLKEGT---R------MR-APDYTTPE---MYQTMLDCWH-GEPSQRPTFSELVEHLGNLLQAN 312 (316)
T ss_dssp CCSH----HHHHHHHHTC---C------CC-CCTTCCHH---HHHHHHHHTC-SSGGGSCCHHHHHHHHHHHHHHH
T ss_pred chhH----HHHHHhccCc---c------CC-CCCCCCHH---HHHHHHHHcC-CChhhCcCHHHHHHHHHHHHhhh
Confidence 3221 1111111100 0 00 01112333 4445556776 99999999999999999987643
No 120
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=100.00 E-value=4.8e-38 Score=324.23 Aligned_cols=203 Identities=23% Similarity=0.373 Sum_probs=160.5
Q ss_pred hccCcccceeeccCccEEEEEEeC-CCcEEEEEEecccc--ccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEEe
Q 006982 304 TNSFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQ--RSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYK 380 (623)
Q Consensus 304 ~~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e 380 (623)
.++|...+.||+|+||.||+|... +++.||+|++.... .....+.+|++++++++||||+++++++.+.+..++|||
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 83 (317)
T 2pmi_A 4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFE 83 (317)
T ss_dssp ---------------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEEE
T ss_pred ccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEEE
Confidence 467888999999999999999964 68999999986532 334678899999999999999999999999999999999
Q ss_pred cCCCCCHhhhccCCC--CCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccC
Q 006982 381 HMPNGSLYDLLHPAD--DTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMN 458 (623)
Q Consensus 381 ~~~~gsL~~~l~~~~--~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~ 458 (623)
|++ |+|.+++.... .....+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|||+++...
T Consensus 84 ~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~ 159 (317)
T 2pmi_A 84 FMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHEN---KILHRDLKPQNLLINKRGQLKLGDFGLARAFG 159 (317)
T ss_dssp CCC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCSSCEETT
T ss_pred ecC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCChHHeEEcCCCCEEECcCccceecC
Confidence 998 59999885421 1224589999999999999999999999 99999999999999999999999999998764
Q ss_pred CCCCcccccccCCCCcccccCcccccC-CCCCcchhHHHHHHHHHHHHhCCCCCCCC
Q 006982 459 PIDTHLSTFVNGEFGDLGYVAPEYART-LVATPKGDVYSFGTVLLELVTGERPTNVA 514 (623)
Q Consensus 459 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~k~DV~sfGvil~elltg~~P~~~~ 514 (623)
..... .....||+.|+|||++.+ ..++.++|||||||++|||++|+.||...
T Consensus 160 ~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~ 212 (317)
T 2pmi_A 160 IPVNT----FSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGT 212 (317)
T ss_dssp SCCCC----CCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred CCccc----CCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 32211 123458999999999876 46899999999999999999999999754
No 121
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=100.00 E-value=1.1e-38 Score=322.88 Aligned_cols=256 Identities=18% Similarity=0.300 Sum_probs=197.8
Q ss_pred hccCcccceeeccCccEEEEEEeCC----CcEEEEEEecccc--ccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeE
Q 006982 304 TNSFSKNNIIGSGRTGTMYKALLED----GTSLMVKRLQDSQ--RSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLL 377 (623)
Q Consensus 304 ~~~f~~~~~lG~G~~g~Vy~~~~~~----~~~vavK~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 377 (623)
.++|...+.||+|+||.||+|...+ +..||+|.+.... ...+.+.+|++++.+++||||+++++++.+ +..++
T Consensus 11 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~ 89 (281)
T 3cc6_A 11 REDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEE-EPTWI 89 (281)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECS-SSCEE
T ss_pred ccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcC-CCCEE
Confidence 3578889999999999999998543 3359999987642 345678999999999999999999999764 45689
Q ss_pred EEecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeeccccccc
Q 006982 378 VYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLM 457 (623)
Q Consensus 378 V~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~ 457 (623)
|+||+++|+|.+++... ...+++..++.++.|++.||.|||+. +|+||||||+||+++.++.+||+|||+++..
T Consensus 90 v~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~ 163 (281)
T 3cc6_A 90 IMELYPYGELGHYLERN---KNSLKVLTLVLYSLQICKAMAYLESI---NCVHRDIAVRNILVASPECVKLGDFGLSRYI 163 (281)
T ss_dssp EEECCTTCBHHHHHHHH---TTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEEEETTEEEECCCCGGGCC
T ss_pred EEecCCCCCHHHHHHhc---cccCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCccceEEECCCCcEEeCccCCCccc
Confidence 99999999999999642 24589999999999999999999999 9999999999999999999999999999876
Q ss_pred CCCCCcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCcccccccHHHHHHHHhccCc
Q 006982 458 NPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVT-GERPTNVAKAPETFKGNLVEWIAQLSSTGQ 536 (623)
Q Consensus 458 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~ellt-g~~P~~~~~~~~~~~~~l~~~~~~~~~~~~ 536 (623)
....... .....+++.|+|||.+.+..++.++||||||+++|||++ |+.||...... .....+...... .
T Consensus 164 ~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~-----~~~~~~~~~~~~-~ 234 (281)
T 3cc6_A 164 EDEDYYK---ASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENK-----DVIGVLEKGDRL-P 234 (281)
T ss_dssp ------------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGG-----GHHHHHHHTCCC-C
T ss_pred ccccccc---cccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChH-----HHHHHHhcCCCC-C
Confidence 5422111 122346889999999988889999999999999999998 99999753221 111111111000 0
Q ss_pred hhhhhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHhhc
Q 006982 537 LQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAIGE 588 (623)
Q Consensus 537 ~~~~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~L~~i~~ 588 (623)
.....+++ +..++..|+. .||++||++.|+++.|+++.+
T Consensus 235 ---------~~~~~~~~---l~~li~~~l~-~~p~~Rps~~ell~~L~~~~~ 273 (281)
T 3cc6_A 235 ---------KPDLCPPV---LYTLMTRCWD-YDPSDRPRFTELVCSLSDVYQ 273 (281)
T ss_dssp ---------CCTTCCHH---HHHHHHHHTC-SSGGGSCCHHHHHHHHHHHHH
T ss_pred ---------CCCCCCHH---HHHHHHHHcc-CCchhCcCHHHHHHHHHHHHH
Confidence 01112333 3444556776 999999999999999998754
No 122
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=100.00 E-value=1.5e-38 Score=323.73 Aligned_cols=256 Identities=22% Similarity=0.367 Sum_probs=197.2
Q ss_pred ccCcccc-eeeccCccEEEEEEe---CCCcEEEEEEecccc---ccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeE
Q 006982 305 NSFSKNN-IIGSGRTGTMYKALL---EDGTSLMVKRLQDSQ---RSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLL 377 (623)
Q Consensus 305 ~~f~~~~-~lG~G~~g~Vy~~~~---~~~~~vavK~~~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 377 (623)
++|...+ .||+|+||.||+|.. .++..||+|++.... ...+.+.+|++++.+++||||+++++++ ..+..++
T Consensus 16 ~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~~~~l 94 (291)
T 1xbb_A 16 KLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWML 94 (291)
T ss_dssp GGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-ESSSEEE
T ss_pred hhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-CCCCcEE
Confidence 4566667 999999999999964 346789999997543 2356789999999999999999999999 5667889
Q ss_pred EEecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeeccccccc
Q 006982 378 VYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLM 457 (623)
Q Consensus 378 V~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~ 457 (623)
|+||+++|+|.+++.. ...+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++..
T Consensus 95 v~e~~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~ 167 (291)
T 1xbb_A 95 VMEMAELGPLNKYLQQ----NRHVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKAL 167 (291)
T ss_dssp EEECCTTEEHHHHHHH----CTTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCCTTCEEC
T ss_pred EEEeCCCCCHHHHHHh----CcCCCHHHHHHHHHHHHHHHHHHHhC---CeEcCCCCcceEEEeCCCcEEEccCCcceee
Confidence 9999999999999964 24589999999999999999999999 9999999999999999999999999999876
Q ss_pred CCCCCcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCcccccccHHHHHHHHhccCc
Q 006982 458 NPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVT-GERPTNVAKAPETFKGNLVEWIAQLSSTGQ 536 (623)
Q Consensus 458 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~ellt-g~~P~~~~~~~~~~~~~l~~~~~~~~~~~~ 536 (623)
........ ......+++.|+|||.+.+..++.++||||||+++|||++ |+.||...... .....+.. ..
T Consensus 168 ~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~-----~~~~~~~~----~~ 237 (291)
T 1xbb_A 168 RADENYYK-AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGS-----EVTAMLEK----GE 237 (291)
T ss_dssp CTTCSEEE-C----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHH-----HHHHHHHT----TC
T ss_pred ccCCCccc-ccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCHH-----HHHHHHHc----CC
Confidence 54332211 1122336789999999988888999999999999999999 99999753221 11111111 00
Q ss_pred hhhhhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHhhc
Q 006982 537 LQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAIGE 588 (623)
Q Consensus 537 ~~~~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~L~~i~~ 588 (623)
... .....++++. .++..|+. .||++||++.|+++.|+++-.
T Consensus 238 ~~~------~~~~~~~~l~---~li~~~l~-~dp~~Rps~~~l~~~L~~~~~ 279 (291)
T 1xbb_A 238 RMG------CPAGCPREMY---DLMNLCWT-YDVENRPGFAAVELRLRNYYY 279 (291)
T ss_dssp CCC------CCTTCCHHHH---HHHHHHTC-SSTTTSCCHHHHHHHHHHHHH
T ss_pred CCC------CCCCCCHHHH---HHHHHHcC-CChhhCcCHHHHHHHHHHHHH
Confidence 000 0112233444 44456776 999999999999999998743
No 123
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=100.00 E-value=3.1e-39 Score=335.29 Aligned_cols=263 Identities=22% Similarity=0.340 Sum_probs=204.3
Q ss_pred hccCcccceeeccCccEEEEEEeCC------CcEEEEEEecccc--ccHHHHHHHHHHhCCC-CCCCCcceeEEEEeCCe
Q 006982 304 TNSFSKNNIIGSGRTGTMYKALLED------GTSLMVKRLQDSQ--RSEKEFVAEMATLGSV-KNRNLVPLLGFCMAKKE 374 (623)
Q Consensus 304 ~~~f~~~~~lG~G~~g~Vy~~~~~~------~~~vavK~~~~~~--~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~ 374 (623)
.++|...+.||+|+||.||+|.... ...||+|.+.... ...+.+.+|++++.++ +||||+++++++.+.+.
T Consensus 45 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~ 124 (333)
T 2i1m_A 45 RNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGP 124 (333)
T ss_dssp TTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred HHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEecCCc
Confidence 4678889999999999999999642 2479999997643 3456789999999999 89999999999999999
Q ss_pred eeEEEecCCCCCHhhhccCCCC----------CCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCC
Q 006982 375 RLLVYKHMPNGSLYDLLHPADD----------TGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDF 444 (623)
Q Consensus 375 ~~lV~e~~~~gsL~~~l~~~~~----------~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~ 444 (623)
.++||||+++|+|.+++..... ....+++..++.++.|++.||+|||+. +|+||||||+||+++.++
T Consensus 125 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~NIl~~~~~ 201 (333)
T 2i1m_A 125 VLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASK---NCIHRDVAARNVLLTNGH 201 (333)
T ss_dssp CEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGCEEEGGG
T ss_pred eEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcC---CcccCCcccceEEECCCC
Confidence 9999999999999999854210 124579999999999999999999999 999999999999999999
Q ss_pred CeEEeecccccccCCCCCcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCccccccc
Q 006982 445 EPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVT-GERPTNVAKAPETFKGN 523 (623)
Q Consensus 445 ~~kl~Dfgla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~ellt-g~~P~~~~~~~~~~~~~ 523 (623)
.+||+|||+++........ .......+|+.|+|||.+.+..++.++||||||+++|||+| |..||....... .
T Consensus 202 ~~kl~Dfg~~~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~----~ 275 (333)
T 2i1m_A 202 VAKIGDFGLARDIMNDSNY--IVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNS----K 275 (333)
T ss_dssp EEEBCCCGGGCCGGGCTTS--EECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSSH----H
T ss_pred eEEECccccccccccccce--eecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccchhH----H
Confidence 9999999999865432211 11223346789999999998899999999999999999999 999987543221 1
Q ss_pred HHHHHHHHhccCchhhhhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHhhcc
Q 006982 524 LVEWIAQLSSTGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAIGER 589 (623)
Q Consensus 524 l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~L~~i~~~ 589 (623)
....+...... . .....+++ +..++..|+. .||.+|||+.||++.|+++.++
T Consensus 276 ~~~~~~~~~~~---------~-~~~~~~~~---l~~li~~~l~-~~p~~Rps~~~l~~~L~~~~~~ 327 (333)
T 2i1m_A 276 FYKLVKDGYQM---------A-QPAFAPKN---IYSIMQACWA-LEPTHRPTFQQICSFLQEQAQE 327 (333)
T ss_dssp HHHHHHHTCCC---------C-CCTTCCHH---HHHHHHHHTC-SSGGGSCCHHHHHHHHHHHHHH
T ss_pred HHHHHhcCCCC---------C-CCCCCCHH---HHHHHHHHhc-cChhhCcCHHHHHHHHHHHHHh
Confidence 11111111000 0 01112333 4445556776 9999999999999999987653
No 124
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=100.00 E-value=9.5e-39 Score=323.49 Aligned_cols=250 Identities=22% Similarity=0.350 Sum_probs=199.2
Q ss_pred hccCcccceeeccCccEEEEEEeC-CCcEEEEEEeccccccHHHHHHHHHHhCCCCCCCCcceeEEEEe-----------
Q 006982 304 TNSFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGFCMA----------- 371 (623)
Q Consensus 304 ~~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~----------- 371 (623)
.++|...+.||+|+||.||+|... +++.||+|++.... ..+.+|++++.+++||||+++++++..
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~ 86 (284)
T 2a19_B 10 GMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN---EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSSKN 86 (284)
T ss_dssp HHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS---GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC-------
T ss_pred ccccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc---HHHHHHHHHHHhCCCCCEEEEeeeEeccccCccccccc
Confidence 457888999999999999999976 79999999986543 356789999999999999999998864
Q ss_pred -----CCeeeEEEecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCe
Q 006982 372 -----KKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEP 446 (623)
Q Consensus 372 -----~~~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~ 446 (623)
....++||||+++|+|.+++.... ...+++..++.++.|++.||.|||+. +|+||||||+||++++++.+
T Consensus 87 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~ 161 (284)
T 2a19_B 87 SSRSKTKCLFIQMEFCDKGTLEQWIEKRR--GEKLDKVLALELFEQITKGVDYIHSK---KLINRDLKPSNIFLVDTKQV 161 (284)
T ss_dssp --CCEEEEEEEEECCCCSCBHHHHHHHGG--GSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEE
T ss_pred ccccCcceEEEEEeccCCCCHHHHHhhcc--CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCCHHHEEEcCCCCE
Confidence 344789999999999999996432 25689999999999999999999999 99999999999999999999
Q ss_pred EEeecccccccCCCCCcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCcccccccHHH
Q 006982 447 KISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVE 526 (623)
Q Consensus 447 kl~Dfgla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~~~~~~~~~~~l~~ 526 (623)
||+|||++......... ....||+.|+|||.+.+..++.++||||||+++|||++|..|+... ..
T Consensus 162 kl~Dfg~~~~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~----------~~ 226 (284)
T 2a19_B 162 KIGDFGLVTSLKNDGKR-----TRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFET----------SK 226 (284)
T ss_dssp EECCCTTCEESSCCSCC-----CCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHH----------HH
T ss_pred EECcchhheeccccccc-----cccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchhH----------HH
Confidence 99999999876543211 2234899999999999989999999999999999999999886420 11
Q ss_pred HHHHHhccCchhhhhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHhhccc
Q 006982 527 WIAQLSSTGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAIGERY 590 (623)
Q Consensus 527 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~L~~i~~~~ 590 (623)
+.... ....+ ....+.++. .++..|+. .||++|||+.|+++.|+.+....
T Consensus 227 ~~~~~-~~~~~---------~~~~~~~~~---~li~~~l~-~dp~~Rps~~e~l~~l~~~~~~~ 276 (284)
T 2a19_B 227 FFTDL-RDGII---------SDIFDKKEK---TLLQKLLS-KKPEDRPNTSEILRTLTVWKKSP 276 (284)
T ss_dssp HHHHH-HTTCC---------CTTSCHHHH---HHHHHHTC-SSGGGSCCHHHHHHHHHHHTC--
T ss_pred HHHHh-hcccc---------cccCCHHHH---HHHHHHcc-CChhhCcCHHHHHHHHHHHhhCC
Confidence 11111 11111 112233333 34456666 99999999999999999987654
No 125
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=100.00 E-value=9.5e-39 Score=333.25 Aligned_cols=248 Identities=22% Similarity=0.324 Sum_probs=190.2
Q ss_pred ccCcccceeeccCccEEEEEEeCCCcEEEEEEecccc---ccHHHHHHHHHHhCCCCC--CCCcceeEEEEeCCeeeEEE
Q 006982 305 NSFSKNNIIGSGRTGTMYKALLEDGTSLMVKRLQDSQ---RSEKEFVAEMATLGSVKN--RNLVPLLGFCMAKKERLLVY 379 (623)
Q Consensus 305 ~~f~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~---~~~~~~~~e~~~l~~l~h--~niv~l~~~~~~~~~~~lV~ 379 (623)
+.|...+.||+|+||.||++...+++.||+|++.... ...+.+.+|++++.+++| |||+++++++.+....++||
T Consensus 9 ~~y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~ 88 (343)
T 3dbq_A 9 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVM 88 (343)
T ss_dssp CEEEEEEEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred CEEEEEEEEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEEEE
Confidence 4688899999999999999999889999999986543 234678899999999987 99999999999999999999
Q ss_pred ecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCC
Q 006982 380 KHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNP 459 (623)
Q Consensus 380 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~ 459 (623)
| +.+|+|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+|||++ ++.+||+|||+++....
T Consensus 89 e-~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~al~~lH~~---~iiHrDikp~NIll~-~~~~kl~DFG~a~~~~~ 159 (343)
T 3dbq_A 89 E-CGNIDLNSWLKK----KKSIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIV-DGMLKLIDFGIANQMQP 159 (343)
T ss_dssp C-CCSEEHHHHHHH----SCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEE-TTEEEECCCSSSCCC--
T ss_pred e-CCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCcceEEEE-CCcEEEeecccccccCc
Confidence 9 568899999964 34689999999999999999999999 999999999999997 57899999999987654
Q ss_pred CCCcccccccCCCCcccccCcccccC-----------CCCCcchhHHHHHHHHHHHHhCCCCCCCCCCcccccccHHHHH
Q 006982 460 IDTHLSTFVNGEFGDLGYVAPEYART-----------LVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWI 528 (623)
Q Consensus 460 ~~~~~~~~~~~~~gt~~y~aPE~~~~-----------~~~s~k~DV~sfGvil~elltg~~P~~~~~~~~~~~~~l~~~~ 528 (623)
.... .......||+.|+|||++.+ ..++.++|||||||++|||++|+.||..... .. ...
T Consensus 160 ~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~------~~-~~~ 230 (343)
T 3dbq_A 160 DTTS--VVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIIN------QI-SKL 230 (343)
T ss_dssp ------------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCS------HH-HHH
T ss_pred cccc--ccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhh------HH-HHH
Confidence 2221 11223458999999999864 6788999999999999999999999964221 11 111
Q ss_pred HHHhccCchhhhhchhhhc---CCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHH
Q 006982 529 AQLSSTGQLQDAIDKCLVA---KGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFL 583 (623)
Q Consensus 529 ~~~~~~~~~~~~~d~~l~~---~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~L 583 (623)
. .++++.... ....+++ ..++..|+. .||++|||+.|+++.-
T Consensus 231 ~---------~~~~~~~~~~~~~~~~~~l---~~li~~~L~-~dp~~Rpt~~e~l~hp 275 (343)
T 3dbq_A 231 H---------AIIDPNHEIEFPDIPEKDL---QDVLKCCLK-RDPKQRISIPELLAHP 275 (343)
T ss_dssp H---------HHHCTTSCCCCCCCSCHHH---HHHHHHHTC-SSTTTSCCHHHHHTSH
T ss_pred H---------HHhcCCcccCCcccCCHHH---HHHHHHHcC-CChhHCCCHHHHHhCc
Confidence 1 111111111 1122333 444556766 9999999999998754
No 126
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=1.1e-38 Score=335.01 Aligned_cols=204 Identities=23% Similarity=0.312 Sum_probs=177.4
Q ss_pred HHHHHHhccCcccceeeccCccEEEEEEe-CCCcEEEEEEeccccccHHHHHHHHHHhCCCC-----CCCCcceeEEEEe
Q 006982 298 SDLMKATNSFSKNNIIGSGRTGTMYKALL-EDGTSLMVKRLQDSQRSEKEFVAEMATLGSVK-----NRNLVPLLGFCMA 371 (623)
Q Consensus 298 ~~l~~~~~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~-----h~niv~l~~~~~~ 371 (623)
.+.....++|...+.||+|+||.||+|.. .+++.||+|++.........+..|++++.+++ ||||+++++++..
T Consensus 28 ~~g~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~~~~~~ 107 (360)
T 3llt_A 28 KKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIKKYTRSAKIEADILKKIQNDDINNNNIVKYHGKFMY 107 (360)
T ss_dssp CTTCEETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSCHHHHHHHHHHHHHHHHTCCCSTTGGGBCCEEEEEEE
T ss_pred ecceEecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccchhhhhhhHHHHHHHHHhcccCCCCCCeecccceeeE
Confidence 33334467899999999999999999997 46889999999866656667788998888886 9999999999999
Q ss_pred CCeeeEEEecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCC---------
Q 006982 372 KKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDD--------- 442 (623)
Q Consensus 372 ~~~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~--------- 442 (623)
.+..++||||+ +++|.+++..... ..+++..+..++.|++.||+|||+. +|+||||||+|||++.
T Consensus 108 ~~~~~lv~e~~-~~~L~~~~~~~~~--~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~~~~~~ 181 (360)
T 3llt_A 108 YDHMCLIFEPL-GPSLYEIITRNNY--NGFHIEDIKLYCIEILKALNYLRKM---SLTHTDLKPENILLDDPYFEKSLIT 181 (360)
T ss_dssp TTEEEEEECCC-CCBHHHHHHHTTT--CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCTTCCEEEEE
T ss_pred CCeeEEEEcCC-CCCHHHHHHhcCC--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCcccEEEccccccccccc
Confidence 99999999999 9999999975432 4589999999999999999999999 9999999999999975
Q ss_pred ----------------CCCeEEeecccccccCCCCCcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHh
Q 006982 443 ----------------DFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVT 506 (623)
Q Consensus 443 ----------------~~~~kl~Dfgla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~ellt 506 (623)
++.+||+|||+++...... ....||+.|+|||++.+..++.++|||||||++|||++
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~~-------~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~ 254 (360)
T 3llt_A 182 VRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSDYH-------GSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYT 254 (360)
T ss_dssp EECTTTCCEEEEEEESCCCEEECCCTTCEETTSCC-------CSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHH
T ss_pred hhcccccccccccccCCCCEEEEeccCceecCCCC-------cCccCcccccCcHHHcCCCCCCccchHHHHHHHHHHHH
Confidence 8899999999998654321 22358999999999999999999999999999999999
Q ss_pred CCCCCCCC
Q 006982 507 GERPTNVA 514 (623)
Q Consensus 507 g~~P~~~~ 514 (623)
|+.||...
T Consensus 255 g~~pf~~~ 262 (360)
T 3llt_A 255 GSLLFRTH 262 (360)
T ss_dssp SSCSCCCS
T ss_pred CCCCCCCC
Confidence 99999754
No 127
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=100.00 E-value=4.3e-38 Score=324.46 Aligned_cols=242 Identities=20% Similarity=0.293 Sum_probs=196.6
Q ss_pred ccCcccceeeccCccEEEEEEeC-CCcEEEEEEecccc----ccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEE
Q 006982 305 NSFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQ----RSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVY 379 (623)
Q Consensus 305 ~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 379 (623)
++|...+.||+|+||.||+++.. +|+.||+|++.... ...+.+.+|..++..++||||+++++++.+....++||
T Consensus 6 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv~ 85 (318)
T 1fot_A 6 QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIM 85 (318)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEEE
T ss_pred HHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEEE
Confidence 56888999999999999999965 68999999997542 34567889999999999999999999999999999999
Q ss_pred ecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCC
Q 006982 380 KHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNP 459 (623)
Q Consensus 380 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~ 459 (623)
||+++|+|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++....
T Consensus 86 e~~~gg~L~~~l~~----~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~~ 158 (318)
T 1fot_A 86 DYIEGGELFSLLRK----SQRFPNPVAKFYAAEVCLALEYLHSK---DIIYRDLKPENILLDKNGHIKITDFGFAKYVPD 158 (318)
T ss_dssp CCCCSCBHHHHHHH----TSSCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECTTSCEEECCCSSCEECSS
T ss_pred eCCCCCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChheEEEcCCCCEEEeecCcceecCC
Confidence 99999999999963 34689999999999999999999999 999999999999999999999999999987543
Q ss_pred CCCcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCcccccccHHHHHHHHhccCchhh
Q 006982 460 IDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQD 539 (623)
Q Consensus 460 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 539 (623)
.. ....||+.|+|||++.+..++.++|||||||++|||++|+.||..... ..........
T Consensus 159 ~~-------~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~--------~~~~~~i~~~----- 218 (318)
T 1fot_A 159 VT-------YTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNT--------MKTYEKILNA----- 218 (318)
T ss_dssp CB-------CCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSH--------HHHHHHHHHC-----
T ss_pred cc-------ccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCH--------HHHHHHHHhC-----
Confidence 11 223589999999999999999999999999999999999999975321 1111111111
Q ss_pred hhchhhh-cCCCHHHHHHHHHHHhhccCCCCCCCCC-----CHHHHHH
Q 006982 540 AIDKCLV-AKGVDNELFQFLKVACNCVLPTIPKERP-----TMFEVYQ 581 (623)
Q Consensus 540 ~~d~~l~-~~~~~~~~~~~~~~~~~C~~~~~P~~RP-----s~~ev~~ 581 (623)
.+. ....++++..+++ .|+. .||++|| +++|+++
T Consensus 219 ----~~~~p~~~~~~~~~li~---~lL~-~dp~~R~~~~~~~~~~i~~ 258 (318)
T 1fot_A 219 ----ELRFPPFFNEDVKDLLS---RLIT-RDLSQRLGNLQNGTEDVKN 258 (318)
T ss_dssp ----CCCCCTTSCHHHHHHHH---HHTC-SCTTTCTTSSTTTTHHHHT
T ss_pred ----CCCCCCCCCHHHHHHHH---HHhc-cCHHHcCCCcCCCHHHHhc
Confidence 000 1123344444443 4555 8999999 8888764
No 128
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=100.00 E-value=9.1e-39 Score=332.98 Aligned_cols=248 Identities=21% Similarity=0.303 Sum_probs=195.8
Q ss_pred HHhccCcccceeeccCccEEEEEEeC-CCcEEEEEEeccc----cccHHHHHHHHHHhCCC-CCCCCcceeEEEEeCCee
Q 006982 302 KATNSFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDS----QRSEKEFVAEMATLGSV-KNRNLVPLLGFCMAKKER 375 (623)
Q Consensus 302 ~~~~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~----~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~ 375 (623)
...++|...+.||+|+||.||+|+.+ +++.||+|+++.. ......+..|.+++.++ +||||+++++++.+.+..
T Consensus 14 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~~ 93 (345)
T 1xjd_A 14 LKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENL 93 (345)
T ss_dssp --CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEE
T ss_pred CChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCEE
Confidence 34578999999999999999999975 6889999999754 23456678899988876 999999999999999999
Q ss_pred eEEEecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeeccccc
Q 006982 376 LLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLAR 455 (623)
Q Consensus 376 ~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~ 455 (623)
++||||+++|+|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++
T Consensus 94 ~lv~E~~~gg~L~~~l~~----~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~vkL~DFG~a~ 166 (345)
T 1xjd_A 94 FFVMEYLNGGDLMYHIQS----CHKFDLSRATFYAAEIILGLQFLHSK---GIVYRDLKLDNILLDKDGHIKIADFGMCK 166 (345)
T ss_dssp EEEEECCTTCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCB
T ss_pred EEEEeCCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCChhhEEECCCCCEEEeEChhhh
Confidence 999999999999999963 24689999999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCCcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCcccccccHHHHHHHHhccC
Q 006982 456 LMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTG 535 (623)
Q Consensus 456 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~~~~~~~~~~~l~~~~~~~~~~~ 535 (623)
........ .....||+.|+|||++.+..++.++|||||||++|||++|+.||...... +.........
T Consensus 167 ~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~--------~~~~~i~~~~ 234 (345)
T 1xjd_A 167 ENMLGDAK----TNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEE--------ELFHSIRMDN 234 (345)
T ss_dssp CCCCTTCC----BCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--------HHHHHHHHCC
T ss_pred hcccCCCc----ccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCCHH--------HHHHHHHhCC
Confidence 64332221 22345899999999999999999999999999999999999999753221 1111111110
Q ss_pred chhhhhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHH-HHH
Q 006982 536 QLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMF-EVY 580 (623)
Q Consensus 536 ~~~~~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~-ev~ 580 (623)
..+ ....++++..++ ..|+. .||++||++. |+.
T Consensus 235 -------~~~-p~~~s~~~~~li---~~lL~-~dp~~R~~~~~~i~ 268 (345)
T 1xjd_A 235 -------PFY-PRWLEKEAKDLL---VKLFV-REPEKRLGVRGDIR 268 (345)
T ss_dssp -------CCC-CTTSCHHHHHHH---HHHSC-SSGGGSBTTBSCGG
T ss_pred -------CCC-CcccCHHHHHHH---HHHhc-CCHhHcCCChHHHH
Confidence 000 111234444444 45665 8999999987 554
No 129
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=100.00 E-value=1.2e-38 Score=327.86 Aligned_cols=243 Identities=24% Similarity=0.274 Sum_probs=186.7
Q ss_pred ccCcccceeeccCccEEEEEEeC-CCcEEEEEEeccccc---cHHHHHHHHHHhCCC-CCCCCcceeEEEEeCCeeeEEE
Q 006982 305 NSFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQR---SEKEFVAEMATLGSV-KNRNLVPLLGFCMAKKERLLVY 379 (623)
Q Consensus 305 ~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lV~ 379 (623)
++|...+.||+|+||+||+|... +++.||||++..... ....+..|+..+.++ +||||+++++++.+.+..++||
T Consensus 57 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~lv~ 136 (311)
T 3p1a_A 57 QSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQT 136 (311)
T ss_dssp HHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEEEE
Confidence 57999999999999999999976 799999999865432 233455566555555 8999999999999999999999
Q ss_pred ecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCC
Q 006982 380 KHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNP 459 (623)
Q Consensus 380 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~ 459 (623)
||+ +|+|.+++... +..++|..++.++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++....
T Consensus 137 e~~-~~~L~~~~~~~---~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~~ 209 (311)
T 3p1a_A 137 ELC-GPSLQQHCEAW---GASLPEAQVWGYLRDTLLALAHLHSQ---GLVHLDVKPANIFLGPRGRCKLGDFGLLVELGT 209 (311)
T ss_dssp ECC-CCBHHHHHHHH---CSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECGGGCEEECCCTTCEECC-
T ss_pred ecc-CCCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEECCCCCEEEccceeeeeccc
Confidence 999 67999988643 34699999999999999999999999 999999999999999999999999999987643
Q ss_pred CCCcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCcccccccHHHHHHHHhccCchhh
Q 006982 460 IDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQD 539 (623)
Q Consensus 460 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 539 (623)
... .....||++|+|||++.+ .++.++|||||||++|||++|..|+.... .| .... ....
T Consensus 210 ~~~-----~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~~~----------~~-~~~~-~~~~-- 269 (311)
T 3p1a_A 210 AGA-----GEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGGE----------GW-QQLR-QGYL-- 269 (311)
T ss_dssp ----------CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSSHH----------HH-HHHT-TTCC--
T ss_pred CCC-----CcccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCCcc----------HH-HHHh-ccCC--
Confidence 221 122348999999999876 78999999999999999999987764310 11 1111 1111
Q ss_pred hhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHH
Q 006982 540 AIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQ 581 (623)
Q Consensus 540 ~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~ 581 (623)
.+.+.. ..+++ +.+++..|+. .||++|||++|+++
T Consensus 270 --~~~~~~-~~~~~---l~~li~~~L~-~dP~~Rpt~~ell~ 304 (311)
T 3p1a_A 270 --PPEFTA-GLSSE---LRSVLVMMLE-PDPKLRATAEALLA 304 (311)
T ss_dssp --CHHHHT-TSCHH---HHHHHHHHSC-SSTTTSCCHHHHHT
T ss_pred --Cccccc-CCCHH---HHHHHHHHcC-CChhhCcCHHHHHh
Confidence 111111 12333 3444456766 99999999999985
No 130
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=100.00 E-value=5.4e-39 Score=326.42 Aligned_cols=251 Identities=24% Similarity=0.356 Sum_probs=196.1
Q ss_pred ccCcccceeeccCccEEEEEEeCC-C-------cEEEEEEecccc-ccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCee
Q 006982 305 NSFSKNNIIGSGRTGTMYKALLED-G-------TSLMVKRLQDSQ-RSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKER 375 (623)
Q Consensus 305 ~~f~~~~~lG~G~~g~Vy~~~~~~-~-------~~vavK~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 375 (623)
++|...+.||+|+||.||+|.... + ..|++|++.... ...+.+.+|++++.+++||||+++++++.+.+..
T Consensus 8 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 87 (289)
T 4fvq_A 8 EDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVCGDEN 87 (289)
T ss_dssp GGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTBCCEEEEECCTTCC
T ss_pred hHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeCCCC
Confidence 568888999999999999998543 3 479999986543 4567899999999999999999999999999999
Q ss_pred eEEEecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCC--------eE
Q 006982 376 LLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFE--------PK 447 (623)
Q Consensus 376 ~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~--------~k 447 (623)
++||||+++|+|.+++... ...+++..++.++.|++.||+|||+. +|+||||||+|||++.++. +|
T Consensus 88 ~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~~~~~k 161 (289)
T 4fvq_A 88 ILVQEFVKFGSLDTYLKKN---KNCINILWKLEVAKQLAAAMHFLEEN---TLIHGNVCAKNILLIREEDRKTGNPPFIK 161 (289)
T ss_dssp EEEEECCTTCBHHHHHHHT---GGGCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEEECCBGGGTBCCEEE
T ss_pred EEEEECCCCCCHHHHHHhC---CCCCCHHHHHHHHHHHHHHHHHHhhC---CeECCCcCcceEEEecCCcccccccceee
Confidence 9999999999999999643 24489999999999999999999999 9999999999999998887 99
Q ss_pred EeecccccccCCCCCcccccccCCCCcccccCcccccC-CCCCcchhHHHHHHHHHHHHhCCCCCCCCCCcccccccHHH
Q 006982 448 ISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYART-LVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVE 526 (623)
Q Consensus 448 l~Dfgla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~k~DV~sfGvil~elltg~~P~~~~~~~~~~~~~l~~ 526 (623)
|+|||++....... . ..+|+.|+|||.+.+ ..++.++||||||+++|||++|..|+...... ..
T Consensus 162 l~Dfg~~~~~~~~~----~----~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~-------~~ 226 (289)
T 4fvq_A 162 LSDPGISITVLPKD----I----LQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDS-------QR 226 (289)
T ss_dssp ECCCCSCTTTSCHH----H----HHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSCH-------HH
T ss_pred eccCcccccccCcc----c----cCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccch-------HH
Confidence 99999997653311 1 126788999999987 67899999999999999999976665432211 11
Q ss_pred HHHHHhccCchhhhhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHhhcc
Q 006982 527 WIAQLSSTGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAIGER 589 (623)
Q Consensus 527 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~L~~i~~~ 589 (623)
........... .....++ +.+++..|+. .||++|||+.|+++.|+++...
T Consensus 227 ~~~~~~~~~~~---------~~~~~~~---l~~li~~~l~-~dp~~Rps~~~ll~~l~~l~~p 276 (289)
T 4fvq_A 227 KLQFYEDRHQL---------PAPKAAE---LANLINNCMD-YEPDHRPSFRAIIRDLNSLFTP 276 (289)
T ss_dssp HHHHHHTTCCC---------CCCSSCT---THHHHHHHSC-SSGGGSCCHHHHHHHHHTCC--
T ss_pred HHHHhhccCCC---------CCCCCHH---HHHHHHHHcC-CChhHCcCHHHHHHHHHHhcCC
Confidence 11111000000 0111222 3444556776 9999999999999999988653
No 131
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=100.00 E-value=3e-38 Score=320.60 Aligned_cols=251 Identities=20% Similarity=0.293 Sum_probs=192.6
Q ss_pred ccCcccceeeccCccEEEEEEeC-CCcEEEEEEecccc--ccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEEec
Q 006982 305 NSFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQ--RSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKH 381 (623)
Q Consensus 305 ~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 381 (623)
++|...+.||+|+||.||++... ++..+|+|++.... ...+.+.+|++++.+++||||+++++++.+....++||||
T Consensus 22 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 101 (285)
T 3is5_A 22 DLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMET 101 (285)
T ss_dssp HHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred hheeecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEEEEe
Confidence 46888999999999999999964 68899999986543 3467899999999999999999999999999999999999
Q ss_pred CCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceee---CCCCCeEEeecccccccC
Q 006982 382 MPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILL---DDDFEPKISDFGLARLMN 458 (623)
Q Consensus 382 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl---~~~~~~kl~Dfgla~~~~ 458 (623)
+++|+|.+++......+..+++..++.++.|++.||+|||+. +|+||||||+||++ +.++.+||+|||+++...
T Consensus 102 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~~ 178 (285)
T 3is5_A 102 CEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQ---HVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFK 178 (285)
T ss_dssp CSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEESSSSTTCCEEECCCCCCCC--
T ss_pred CCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhC---CEEECCCCHHHEEEecCCCCCCEEEEeeecceecC
Confidence 999999999854322346689999999999999999999999 99999999999999 556889999999998754
Q ss_pred CCCCcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCcccccccHHHHHHHHhccCchh
Q 006982 459 PIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQ 538 (623)
Q Consensus 459 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 538 (623)
.... .....||+.|+|||.+. ..++.++||||||+++|||++|+.||..... .............
T Consensus 179 ~~~~-----~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~~~~--------~~~~~~~~~~~~~- 243 (285)
T 3is5_A 179 SDEH-----STNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGTSL--------EEVQQKATYKEPN- 243 (285)
T ss_dssp -------------CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCCSSH--------HHHHHHHHHCCCC-
T ss_pred Cccc-----CcCcccccCcCChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCCCCCH--------HHHHhhhccCCcc-
Confidence 3221 12234899999999886 4679999999999999999999999975321 1111111100000
Q ss_pred hhhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHH
Q 006982 539 DAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQ 581 (623)
Q Consensus 539 ~~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~ 581 (623)
.........+++. .++..|+. .||++|||+.|+++
T Consensus 244 ----~~~~~~~~~~~~~---~li~~~L~-~dP~~Rps~~e~l~ 278 (285)
T 3is5_A 244 ----YAVECRPLTPQAV---DLLKQMLT-KDPERRPSAAQVLH 278 (285)
T ss_dssp ----CCC--CCCCHHHH---HHHHHHTC-SCTTTSCCHHHHHT
T ss_pred ----cccccCcCCHHHH---HHHHHHcc-CChhhCcCHHHHhc
Confidence 0000011233444 44456666 99999999999975
No 132
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=100.00 E-value=5.2e-38 Score=331.21 Aligned_cols=248 Identities=22% Similarity=0.328 Sum_probs=190.7
Q ss_pred CcccceeeccCccEEEEEEe-CCCcEEEEEEecccc-ccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEEecCCC
Q 006982 307 FSKNNIIGSGRTGTMYKALL-EDGTSLMVKRLQDSQ-RSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKHMPN 384 (623)
Q Consensus 307 f~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~ 384 (623)
|...+.||+|+||.||+|.. .+|..||+|++.... ...+.+.+|++++.+++||||+++++++.+.+..++||||+++
T Consensus 91 ~~~~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~ 170 (373)
T 2x4f_A 91 VSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDG 170 (373)
T ss_dssp EEEEEECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTT
T ss_pred eecceEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCC
Confidence 34467899999999999996 468999999997643 3456789999999999999999999999999999999999999
Q ss_pred CCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceee--CCCCCeEEeecccccccCCCCC
Q 006982 385 GSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILL--DDDFEPKISDFGLARLMNPIDT 462 (623)
Q Consensus 385 gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl--~~~~~~kl~Dfgla~~~~~~~~ 462 (623)
|+|.+++... ...+++..++.++.|++.||+|||+. +|+||||||+|||+ ++++.+||+|||+++.......
T Consensus 171 ~~L~~~l~~~---~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~~ 244 (373)
T 2x4f_A 171 GELFDRIIDE---SYNLTELDTILFMKQICEGIRHMHQM---YILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREK 244 (373)
T ss_dssp CEEHHHHHHT---GGGCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTCB
T ss_pred CcHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEEecCCCCcEEEEeCCCceecCCccc
Confidence 9999988532 24689999999999999999999999 99999999999999 6778999999999987654322
Q ss_pred cccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCcccccccHHHHHHHHhccCchhhhhc
Q 006982 463 HLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAID 542 (623)
Q Consensus 463 ~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d 542 (623)
.....||+.|+|||++....++.++|||||||++|||++|+.||...... +.......... ....
T Consensus 245 -----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~--------~~~~~i~~~~~--~~~~ 309 (373)
T 2x4f_A 245 -----LKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDA--------ETLNNILACRW--DLED 309 (373)
T ss_dssp -----CCCCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSHH--------HHHHHHHHTCC--CSCS
T ss_pred -----cccccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHH--------HHHHHHHhccC--CCCh
Confidence 12235899999999999889999999999999999999999999753221 11111111100 0000
Q ss_pred hhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHH
Q 006982 543 KCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQ 581 (623)
Q Consensus 543 ~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~ 581 (623)
... ...++++ ..++..|+. .||++|||+.|+++
T Consensus 310 ~~~--~~~~~~~---~~li~~~L~-~dp~~Rps~~e~l~ 342 (373)
T 2x4f_A 310 EEF--QDISEEA---KEFISKLLI-KEKSWRISASEALK 342 (373)
T ss_dssp GGG--TTSCHHH---HHHHHTTSC-SSGGGSCCHHHHHH
T ss_pred hhh--ccCCHHH---HHHHHHHcC-CChhhCCCHHHHhc
Confidence 000 1123333 344456666 99999999999987
No 133
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=100.00 E-value=4.2e-38 Score=323.72 Aligned_cols=260 Identities=22% Similarity=0.312 Sum_probs=191.6
Q ss_pred ccCcccceeeccCccEEEEEEe-CCCcEEEEEEecccc----ccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCee----
Q 006982 305 NSFSKNNIIGSGRTGTMYKALL-EDGTSLMVKRLQDSQ----RSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKER---- 375 (623)
Q Consensus 305 ~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~----~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~---- 375 (623)
++|...+.||+|+||.||++.. .+++.||+|++.... .....+.+|++++.+++||||+++++++......
T Consensus 12 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~ 91 (311)
T 3ork_A 12 DRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLP 91 (311)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEEE
T ss_pred CcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCccc
Confidence 5788899999999999999995 578999999997642 2235688999999999999999999998776543
Q ss_pred eEEEecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeeccccc
Q 006982 376 LLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLAR 455 (623)
Q Consensus 376 ~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~ 455 (623)
++||||+++|+|.++++. ...+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++
T Consensus 92 ~lv~e~~~g~~L~~~l~~----~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~a~ 164 (311)
T 3ork_A 92 YIVMEYVDGVTLRDIVHT----EGPMTPKRAIEVIADACQALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIAR 164 (311)
T ss_dssp EEEEECCCEEEHHHHHHH----HCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEETTSCEEECCCSCC-
T ss_pred EEEEecCCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CCCcCCCCHHHEEEcCCCCEEEeeccCcc
Confidence 899999999999999963 24689999999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCCcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCcccccccHHHHHHHHhccC
Q 006982 456 LMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTG 535 (623)
Q Consensus 456 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~~~~~~~~~~~l~~~~~~~~~~~ 535 (623)
......... .......||+.|+|||++.+..++.++||||||+++|||++|+.||..... ...........
T Consensus 165 ~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~--------~~~~~~~~~~~ 235 (311)
T 3ork_A 165 AIADSGNSV-TQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSP--------VSVAYQHVRED 235 (311)
T ss_dssp ------------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSH--------HHHHHHHHHCC
T ss_pred ccccccccc-ccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCh--------HHHHHHHhcCC
Confidence 765422211 112234589999999999999999999999999999999999999975322 11111111111
Q ss_pred chhhhhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHH-HHHHHHHhhc
Q 006982 536 QLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFE-VYQFLRAIGE 588 (623)
Q Consensus 536 ~~~~~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~e-v~~~L~~i~~ 588 (623)
.. .+.......++++. .++..|+. .||++||++.+ +...+..+..
T Consensus 236 ~~----~~~~~~~~~~~~l~---~li~~~l~-~dP~~R~~~~~~l~~~l~~~~~ 281 (311)
T 3ork_A 236 PI----PPSARHEGLSADLD---AVVLKALA-KNPENRYQTAAEMRADLVRVHN 281 (311)
T ss_dssp CC----CHHHHSTTCCHHHH---HHHHHHTC-SSGGGSCSSHHHHHHHHHHHHT
T ss_pred CC----CcccccCCCCHHHH---HHHHHHHh-cCHhhChhhHHHHHHHHHHHhc
Confidence 10 01111112334444 44456766 99999996555 5556665543
No 134
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=1.1e-37 Score=320.30 Aligned_cols=260 Identities=19% Similarity=0.241 Sum_probs=194.3
Q ss_pred hccCcccceeeccCccEEEEEEeC-CCcEEEEEEeccccc----cHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEE
Q 006982 304 TNSFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQR----SEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLV 378 (623)
Q Consensus 304 ~~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~----~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV 378 (623)
.++|...+.||+|+||.||++... +++.||+|++..... ..+.+.+|++++.+++||||+++++++...+..++|
T Consensus 33 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv 112 (309)
T 2h34_A 33 FGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLYVD 112 (309)
T ss_dssp -CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEE
T ss_pred eccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEEEE
Confidence 467999999999999999999965 688999999975432 246788999999999999999999999999999999
Q ss_pred EecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccC
Q 006982 379 YKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMN 458 (623)
Q Consensus 379 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~ 458 (623)
+||+++++|.+++... ..+++..++.++.|++.||.|||+. +|+||||||+||+++.++.+||+|||++....
T Consensus 113 ~e~~~~~~L~~~l~~~----~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~ 185 (309)
T 2h34_A 113 MRLINGVDLAAMLRRQ----GPLAPPRAVAIVRQIGSALDAAHAA---GATHRDVKPENILVSADDFAYLVDFGIASATT 185 (309)
T ss_dssp EECCCCEEHHHHHHHH----CSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECSCCC-----
T ss_pred EEecCCCCHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC---cCCcCCCChHHEEEcCCCCEEEecCccCcccc
Confidence 9999999999999632 4589999999999999999999999 99999999999999999999999999998654
Q ss_pred CCCCcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCcccccccHHHHHHHHhccCchh
Q 006982 459 PIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQ 538 (623)
Q Consensus 459 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 538 (623)
..... ......|++.|+|||.+.+..++.++||||||+++|||++|+.||..... ...........
T Consensus 186 ~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~---------~~~~~~~~~~~-- 251 (309)
T 2h34_A 186 DEKLT---QLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQL---------SVMGAHINQAI-- 251 (309)
T ss_dssp --------------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHH---------HHHHHHHHSCC--
T ss_pred ccccc---cccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchH---------HHHHHHhccCC--
Confidence 32211 12233589999999999998999999999999999999999999974211 11111111100
Q ss_pred hhhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCC-CHHHHHHHHHHhhccc
Q 006982 539 DAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERP-TMFEVYQFLRAIGERY 590 (623)
Q Consensus 539 ~~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RP-s~~ev~~~L~~i~~~~ 590 (623)
..........+.++. .++..|+. .||++|| +++++++.|+++....
T Consensus 252 --~~~~~~~~~~~~~l~---~li~~~l~-~dP~~Rp~s~~~l~~~l~~~l~~~ 298 (309)
T 2h34_A 252 --PRPSTVRPGIPVAFD---AVIARGMA-KNPEDRYVTCGDLSAAAHAALATA 298 (309)
T ss_dssp --CCGGGTSTTCCTHHH---HHHHHHTC-SSGGGSCSSHHHHHHHHHHTCC--
T ss_pred --CCccccCCCCCHHHH---HHHHHhcc-CCHHHHHHhHHHHHHHHHHHHHhh
Confidence 000001112233344 34456666 9999999 9999999999876554
No 135
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=100.00 E-value=1.7e-37 Score=316.45 Aligned_cols=272 Identities=19% Similarity=0.255 Sum_probs=206.4
Q ss_pred hccCcccceeeccCccEEEEEEe-CCCcEEEEEEeccccccHHHHHHHHHHhCCCCCCCCcceeEEE-EeCCeeeEEEec
Q 006982 304 TNSFSKNNIIGSGRTGTMYKALL-EDGTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGFC-MAKKERLLVYKH 381 (623)
Q Consensus 304 ~~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~-~~~~~~~lV~e~ 381 (623)
.++|...+.||+|+||.||+|.. .+++.||+|++..... ...+.+|++++.+++|++++..+.++ ......++||||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~ 86 (296)
T 3uzp_A 8 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK-HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMEL 86 (296)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSS-CCHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEEC
T ss_pred ccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcc-hhHHHHHHHHHHHhhcCCCCCccccccCCCCceEEEEEe
Confidence 35788899999999999999996 5789999999865432 34688999999999998877776666 556677999999
Q ss_pred CCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceee---CCCCCeEEeecccccccC
Q 006982 382 MPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILL---DDDFEPKISDFGLARLMN 458 (623)
Q Consensus 382 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl---~~~~~~kl~Dfgla~~~~ 458 (623)
+ +++|.+++... ...+++..++.++.|++.||+|||+. +|+||||||+||++ ++++.+||+|||+++...
T Consensus 87 ~-~~~L~~~~~~~---~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~ 159 (296)
T 3uzp_A 87 L-GPSLEDLFNFC---SRKFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYR 159 (296)
T ss_dssp C-CCBHHHHHHHT---TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECCGGGTTCEEECCCTTCEECB
T ss_pred c-CCCHHHHHHhh---ccCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHeEEecCCCCCeEEEeeCCCccccc
Confidence 9 99999999632 24689999999999999999999999 99999999999999 488999999999998765
Q ss_pred CCCCccc---ccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCcccccccHHHHHHHHhccC
Q 006982 459 PIDTHLS---TFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTG 535 (623)
Q Consensus 459 ~~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~~~~~~~~~~~l~~~~~~~~~~~ 535 (623)
....... .......||+.|+|||.+.+..++.++|||||||++|||++|+.||........ ............ ..
T Consensus 160 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~-~~~~~~~~~~~~-~~ 237 (296)
T 3uzp_A 160 DARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATK-RQKYERISEKKM-ST 237 (296)
T ss_dssp CTTTCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSS-SSHHHHHHHHHH-HS
T ss_pred ccccccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhh-hhhhhhhccccc-CC
Confidence 4322111 112234589999999999999999999999999999999999999986433211 111111111111 00
Q ss_pred chhhhhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHhhcccCCCCC
Q 006982 536 QLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAIGERYHFTTE 595 (623)
Q Consensus 536 ~~~~~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~L~~i~~~~~~~~~ 595 (623)
.... +. ...++++ .+++..|+. .||++|||+.+|++.|+++.++......
T Consensus 238 ~~~~-----~~-~~~~~~l---~~li~~~l~-~dp~~Rps~~~l~~~l~~~~~~~~~~~~ 287 (296)
T 3uzp_A 238 PIEV-----LC-KGYPSEF---ATYLNFCRS-LRFDDKPDYSYLRQLFRNLFHRQGFSYD 287 (296)
T ss_dssp CHHH-----HT-TTSCHHH---HHHHHHHHT-SCTTCCCCHHHHHHHHHHHHHHTTCCSS
T ss_pred chHH-----HH-hhCCHHH---HHHHHHHHh-cCcCcCCCHHHHHHHHHHHHHhcCCccc
Confidence 1100 00 1123344 444556766 9999999999999999999887765443
No 136
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=100.00 E-value=8.7e-38 Score=315.18 Aligned_cols=252 Identities=23% Similarity=0.346 Sum_probs=198.5
Q ss_pred hccCcccceeeccCccEEEEEEeC-CCcEEEEEEecccc--ccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEEe
Q 006982 304 TNSFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQ--RSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYK 380 (623)
Q Consensus 304 ~~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e 380 (623)
.++|...+.||+|+||.||+|... +++.||+|++.... ...+.+.+|++++.+++||||+++++++.+.+..++|+|
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 85 (276)
T 2yex_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLE 85 (276)
T ss_dssp HHHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred ecceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEEEE
Confidence 467889999999999999999975 78999999986543 345678999999999999999999999999999999999
Q ss_pred cCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCCC
Q 006982 381 HMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPI 460 (623)
Q Consensus 381 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~~ 460 (623)
|+++|+|.+++.. ...+++..++.++.|++.||.|||+. +|+||||||+||+++.++.+||+|||++......
T Consensus 86 ~~~~~~L~~~l~~----~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~ 158 (276)
T 2yex_A 86 YCSGGELFDRIEP----DIGMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFRYN 158 (276)
T ss_dssp CCTTEEGGGGSBT----TTBCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEECEET
T ss_pred ecCCCcHHHHHhh----ccCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCChHHEEEccCCCEEEeeCCCccccCCC
Confidence 9999999999953 35689999999999999999999999 9999999999999999999999999999865432
Q ss_pred CCcccccccCCCCcccccCcccccCCCC-CcchhHHHHHHHHHHHHhCCCCCCCCCCcccccccHHHHHHHHhccCchhh
Q 006982 461 DTHLSTFVNGEFGDLGYVAPEYARTLVA-TPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQD 539 (623)
Q Consensus 461 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~-s~k~DV~sfGvil~elltg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 539 (623)
.. ........||+.|+|||.+.+..+ +.++||||||+++|||++|+.||....... .....|..... .
T Consensus 159 ~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~---~~~~~~~~~~~---~--- 227 (276)
T 2yex_A 159 NR--ERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSC---QEYSDWKEKKT---Y--- 227 (276)
T ss_dssp TE--ECCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTS---HHHHHHHTTCT---T---
T ss_pred cc--hhcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHH---HHHHHhhhccc---c---
Confidence 11 111233458999999999987665 779999999999999999999997543321 11122211100 0
Q ss_pred hhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHH
Q 006982 540 AIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQ 581 (623)
Q Consensus 540 ~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~ 581 (623)
.. . ....++++. .++..|+. .||++|||++|+++
T Consensus 228 -~~-~--~~~~~~~~~---~li~~~l~-~~p~~Rps~~~il~ 261 (276)
T 2yex_A 228 -LN-P--WKKIDSAPL---ALLHKILV-ENPSARITIPDIKK 261 (276)
T ss_dssp -ST-T--GGGSCHHHH---HHHHHHSC-SSTTTSCCHHHHTT
T ss_pred -cC-c--hhhcCHHHH---HHHHHHCC-CCchhCCCHHHHhc
Confidence 00 0 011233333 44556666 99999999999875
No 137
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=100.00 E-value=3.5e-38 Score=326.68 Aligned_cols=198 Identities=21% Similarity=0.294 Sum_probs=165.9
Q ss_pred ccCcccceeeccCccEEEEEEe----CCCcEEEEEEecccc-----ccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCee
Q 006982 305 NSFSKNNIIGSGRTGTMYKALL----EDGTSLMVKRLQDSQ-----RSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKER 375 (623)
Q Consensus 305 ~~f~~~~~lG~G~~g~Vy~~~~----~~~~~vavK~~~~~~-----~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 375 (623)
++|...+.||+|+||.||+++. .+++.||+|+++... .....+.+|++++++++||||+++++++.+.+..
T Consensus 17 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~ 96 (327)
T 3a62_A 17 ECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGKL 96 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSSCE
T ss_pred HHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCCEE
Confidence 5788899999999999999996 478999999997542 2345678899999999999999999999999999
Q ss_pred eEEEecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeeccccc
Q 006982 376 LLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLAR 455 (623)
Q Consensus 376 ~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~ 455 (623)
++||||+++|+|.+++.. ...+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|||+++
T Consensus 97 ~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~ 169 (327)
T 3a62_A 97 YLILEYLSGGELFMQLER----EGIFMEDTACFYLAEISMALGHLHQK---GIIYRDLKPENIMLNHQGHVKLTDFGLCK 169 (327)
T ss_dssp EEEEECCTTEEHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCTTTEEECTTSCEEECCCSCC-
T ss_pred EEEEeCCCCCcHHHHHHh----CCCCCHHHHHHHHHHHHHHHHHHHhC---CEEcccCCHHHeEECCCCcEEEEeCCccc
Confidence 999999999999999963 24588999999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCCcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCC
Q 006982 456 LMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNV 513 (623)
Q Consensus 456 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~ 513 (623)
....... ......||+.|+|||.+.+..++.++||||||+++|||++|+.||..
T Consensus 170 ~~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~ 223 (327)
T 3a62_A 170 ESIHDGT----VTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTG 223 (327)
T ss_dssp -------------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred ccccCCc----cccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCC
Confidence 6433211 12234589999999999998999999999999999999999999975
No 138
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=100.00 E-value=6.1e-38 Score=327.76 Aligned_cols=199 Identities=21% Similarity=0.250 Sum_probs=175.4
Q ss_pred hccCcccceeeccCccEEEEEEeC-CCcEEEEEEecccc----ccHHHHHHHHHHhCCC-CCCCCcceeEEEEeCCeeeE
Q 006982 304 TNSFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQ----RSEKEFVAEMATLGSV-KNRNLVPLLGFCMAKKERLL 377 (623)
Q Consensus 304 ~~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~l 377 (623)
.++|...+.||+|+||.||+++.. +++.||+|++.... .....+..|.+++..+ +||||+++++++.+.+..++
T Consensus 19 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~l 98 (353)
T 2i0e_A 19 LTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYF 98 (353)
T ss_dssp CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEEE
T ss_pred hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEEE
Confidence 467899999999999999999976 47889999997542 3456788999999988 89999999999999999999
Q ss_pred EEecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeeccccccc
Q 006982 378 VYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLM 457 (623)
Q Consensus 378 V~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~ 457 (623)
||||+++|+|.+++... ..+++..++.++.|++.||.|||+. +|+||||||+|||++.++.+||+|||+++..
T Consensus 99 v~E~~~gg~L~~~l~~~----~~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~vkL~DFG~a~~~ 171 (353)
T 2i0e_A 99 VMEYVNGGDLMYHIQQV----GRFKEPHAVFYAAEIAIGLFFLQSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKEN 171 (353)
T ss_dssp EEECCCSCBHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCC
T ss_pred EEeCCCCCcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC---CEEeccCCHHHEEEcCCCcEEEEeCCccccc
Confidence 99999999999999632 4589999999999999999999999 9999999999999999999999999999864
Q ss_pred CCCCCcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCC
Q 006982 458 NPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNV 513 (623)
Q Consensus 458 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~ 513 (623)
...... .....||+.|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 172 ~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~ 223 (353)
T 2i0e_A 172 IWDGVT----TKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEG 223 (353)
T ss_dssp CCTTCC----BCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred ccCCcc----cccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCC
Confidence 322211 2234589999999999999999999999999999999999999975
No 139
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=100.00 E-value=1.6e-37 Score=316.45 Aligned_cols=271 Identities=20% Similarity=0.247 Sum_probs=202.3
Q ss_pred HhccCcccceeeccCccEEEEEEe-CCCcEEEEEEeccccccHHHHHHHHHHhCCCCCCCCcceeEEE-EeCCeeeEEEe
Q 006982 303 ATNSFSKNNIIGSGRTGTMYKALL-EDGTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGFC-MAKKERLLVYK 380 (623)
Q Consensus 303 ~~~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~-~~~~~~~lV~e 380 (623)
..++|...+.||+|+||.||+|.. .+++.||+|++..... ...+.+|++++.+++|++++..+.++ ...+..++|||
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e 85 (296)
T 4hgt_A 7 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK-HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVME 85 (296)
T ss_dssp ----CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC----CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEE
T ss_pred cCCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeeccccc-chHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEEEE
Confidence 346799999999999999999996 5788999998654332 23577899999999998887777766 55677899999
Q ss_pred cCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceee---CCCCCeEEeeccccccc
Q 006982 381 HMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILL---DDDFEPKISDFGLARLM 457 (623)
Q Consensus 381 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl---~~~~~~kl~Dfgla~~~ 457 (623)
|+ +|+|.+++... ...+++..++.++.|++.||+|||+. +|+||||||+|||+ ++++.+||+|||+++..
T Consensus 86 ~~-~~~L~~~~~~~---~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~ 158 (296)
T 4hgt_A 86 LL-GPSLEDLFNFC---SRKFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKY 158 (296)
T ss_dssp CC-CCBHHHHHHHT---TSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECCGGGTTCEEECCCTTCEEC
T ss_pred cc-CCCHHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeeeeccCCCCeEEEecCccceec
Confidence 99 99999998632 24689999999999999999999999 99999999999999 78999999999999876
Q ss_pred CCCCCccc---ccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCcccccccHHHHHHHHhcc
Q 006982 458 NPIDTHLS---TFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSST 534 (623)
Q Consensus 458 ~~~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~~~~~~~~~~~l~~~~~~~~~~ 534 (623)
........ .......||+.|+|||.+.+..++.++|||||||++|||++|+.||......... ........... .
T Consensus 159 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~-~~~~~~~~~~~-~ 236 (296)
T 4hgt_A 159 RDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKR-QKYERISEKKM-S 236 (296)
T ss_dssp BCTTTCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSS-SHHHHHHHHHH-H
T ss_pred cCcccCccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhh-hhhhhhhcccc-c
Confidence 54322111 1122345899999999999999999999999999999999999999764432211 11111111111 0
Q ss_pred CchhhhhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHhhcccCCC
Q 006982 535 GQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAIGERYHFT 593 (623)
Q Consensus 535 ~~~~~~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~L~~i~~~~~~~ 593 (623)
..... + ....++++. .++..|+. .||++|||+++|++.|+++.++....
T Consensus 237 ~~~~~-----~-~~~~~~~l~---~li~~~l~-~~p~~Rpt~~~l~~~l~~~~~~~~~~ 285 (296)
T 4hgt_A 237 TPIEV-----L-CKGYPSEFA---TYLNFCRS-LRFDDKPDYSYLRQLFRNLFHRQGFS 285 (296)
T ss_dssp SCHHH-----H-TTTSCHHHH---HHHHHHHT-SCTTCCCCHHHHHHHHHHHHHHHTCC
T ss_pred chhhh-----h-hccCCHHHH---HHHHHHHh-cCCCCCCCHHHHHHHHHHHHHHhCCC
Confidence 01000 0 011233444 44456666 99999999999999999988776543
No 140
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=100.00 E-value=2.6e-38 Score=327.42 Aligned_cols=250 Identities=21% Similarity=0.293 Sum_probs=174.2
Q ss_pred cceeeccCccEEEEEEeC-CCcEEEEEEeccccccHHHHHHHHHHhCCCC-CCCCcceeEEEEeCCeeeEEEecCCCCCH
Q 006982 310 NNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQRSEKEFVAEMATLGSVK-NRNLVPLLGFCMAKKERLLVYKHMPNGSL 387 (623)
Q Consensus 310 ~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~lV~e~~~~gsL 387 (623)
.+.||+|+||.||++... +++.||+|++... ....+.+|++++.+++ ||||+++++++.+....++||||+++|+|
T Consensus 16 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~~~L 93 (325)
T 3kn6_A 16 DKPLGEGSFSICRKCVHKKSNQAFAVKIISKR--MEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGEL 93 (325)
T ss_dssp SCCSEEETTEEEEEEEETTTCCEEEEEEEEGG--GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCSCBH
T ss_pred CCccccCCCeEEEEEEECCCCCEEEEEEEChh--hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccCCCcH
Confidence 478999999999999975 6899999998643 3567788999999997 99999999999999999999999999999
Q ss_pred hhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCC---CeEEeecccccccCCCCCcc
Q 006982 388 YDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDF---EPKISDFGLARLMNPIDTHL 464 (623)
Q Consensus 388 ~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~---~~kl~Dfgla~~~~~~~~~~ 464 (623)
.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++ .+||+|||+++........
T Consensus 94 ~~~l~~----~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~~- 165 (325)
T 3kn6_A 94 FERIKK----KKHFSETEASYIMRKLVSAVSHMHDV---GVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQP- 165 (325)
T ss_dssp HHHHHH----CSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEC----CEEEECCCTTCEECCC-----
T ss_pred HHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CCeecCCCHHHEEEecCCCcccEEEeccccceecCCCCCc-
Confidence 999964 35689999999999999999999999 999999999999997765 8999999999876543222
Q ss_pred cccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCcccccccHHHHHHHHhccCchhhhhchh
Q 006982 465 STFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAIDKC 544 (623)
Q Consensus 465 ~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~ 544 (623)
.....||+.|+|||++.+..++.++||||||+++|||++|+.||........ .....+......... . ......
T Consensus 166 ---~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~-~~~~~~~~~~i~~~~-~-~~~~~~ 239 (325)
T 3kn6_A 166 ---LKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLT-CTSAVEIMKKIKKGD-F-SFEGEA 239 (325)
T ss_dssp ---------------------CCCCHHHHHHHHHHHHHHHHHSSCTTC--------CCCHHHHHHHHTTTC-C-CCCSHH
T ss_pred ---ccccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccc-cccHHHHHHHHHcCC-C-CCCccc
Confidence 1233479999999999999999999999999999999999999976433211 111122222211110 0 000000
Q ss_pred hhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHH
Q 006982 545 LVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQ 581 (623)
Q Consensus 545 l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~ 581 (623)
+ ...++++.. ++..|+. .||++|||++|+++
T Consensus 240 ~--~~~s~~~~~---li~~~L~-~dP~~Rpt~~ell~ 270 (325)
T 3kn6_A 240 W--KNVSQEAKD---LIQGLLT-VDPNKRLKMSGLRY 270 (325)
T ss_dssp H--HTSCHHHHH---HHHHHHC-CCTTTCCCTTTSTT
T ss_pred c--cCCCHHHHH---HHHHHCC-CChhHCCCHHHHhc
Confidence 0 012334444 4445665 99999999999864
No 141
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=100.00 E-value=6e-38 Score=327.70 Aligned_cols=243 Identities=18% Similarity=0.241 Sum_probs=196.6
Q ss_pred ccCcccceeeccCccEEEEEEeC-CCcEEEEEEecccc----ccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEE
Q 006982 305 NSFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQ----RSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVY 379 (623)
Q Consensus 305 ~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 379 (623)
++|...+.||+|+||.||+++.. +++.||+|++.... ...+.+.+|++++.+++||||+++++++.+....++||
T Consensus 41 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 120 (350)
T 1rdq_E 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM 120 (350)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEEE
Confidence 57888999999999999999965 68999999996532 34567889999999999999999999999999999999
Q ss_pred ecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCC
Q 006982 380 KHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNP 459 (623)
Q Consensus 380 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~ 459 (623)
||+++|+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++....
T Consensus 121 e~~~gg~L~~~l~~~----~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~ 193 (350)
T 1rdq_E 121 EYVAGGEMFSHLRRI----GRFSEPHARFYAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 193 (350)
T ss_dssp ECCTTCBHHHHHHHH----CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECSS
T ss_pred cCCCCCcHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCccceEEECCCCCEEEcccccceeccC
Confidence 999999999999632 4589999999999999999999999 999999999999999999999999999987643
Q ss_pred CCCcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCcccccccHHHHHHHHhccCchhh
Q 006982 460 IDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQD 539 (623)
Q Consensus 460 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 539 (623)
.. ....||+.|+|||++.+..++.++|||||||++|||++|+.||..... .+........ ..
T Consensus 194 ~~-------~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~--------~~~~~~i~~~-~~-- 255 (350)
T 1rdq_E 194 RT-------WTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP--------IQIYEKIVSG-KV-- 255 (350)
T ss_dssp CB-------CCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH--------HHHHHHHHHC-CC--
T ss_pred Cc-------ccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCCH--------HHHHHHHHcC-CC--
Confidence 21 123489999999999999999999999999999999999999975321 1111111111 00
Q ss_pred hhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCC-----HHHHHH
Q 006982 540 AIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPT-----MFEVYQ 581 (623)
Q Consensus 540 ~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs-----~~ev~~ 581 (623)
.+ ....+.++..++ ..|+. .||++||+ ++|+++
T Consensus 256 ----~~-p~~~~~~~~~li---~~lL~-~dp~~R~~~~~~~~~ei~~ 293 (350)
T 1rdq_E 256 ----RF-PSHFSSDLKDLL---RNLLQ-VDLTKRFGNLKNGVNDIKN 293 (350)
T ss_dssp ----CC-CTTCCHHHHHHH---HHHSC-SCTTTCTTSSTTTTHHHHT
T ss_pred ----CC-CCCCCHHHHHHH---HHHhh-cCHHhccCCccCCHHHHHh
Confidence 00 112334444444 45655 99999998 777765
No 142
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=100.00 E-value=7.3e-38 Score=316.32 Aligned_cols=247 Identities=20% Similarity=0.317 Sum_probs=178.2
Q ss_pred ccCcccceeeccCccEEEEEEe-CCCcEEEEEEecccc----ccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEE
Q 006982 305 NSFSKNNIIGSGRTGTMYKALL-EDGTSLMVKRLQDSQ----RSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVY 379 (623)
Q Consensus 305 ~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~----~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 379 (623)
++|...+.||+|+||.||+|.. .+++.||+|++.... ...+.+.+|++++.+++||||+++++++.+.+..++|+
T Consensus 11 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 90 (278)
T 3cok_A 11 EDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLVL 90 (278)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEEEE
T ss_pred ccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEEEE
Confidence 5688899999999999999996 578999999996532 23467899999999999999999999999999999999
Q ss_pred ecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCC
Q 006982 380 KHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNP 459 (623)
Q Consensus 380 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~ 459 (623)
||+++++|.+++... ...+++..++.++.|++.||.|||+. +|+||||||+||+++.++.+||+|||++.....
T Consensus 91 e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~ 164 (278)
T 3cok_A 91 EMCHNGEMNRYLKNR---VKPFSENEARHFMHQIITGMLYLHSH---GILHRDLTLSNLLLTRNMNIKIADFGLATQLKM 164 (278)
T ss_dssp ECCTTEEHHHHHHTC---SSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSSCCGGGEEECTTCCEEECCCTTCEECC-
T ss_pred ecCCCCcHHHHHhhc---cCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEEEeecceeeccC
Confidence 999999999999642 25689999999999999999999999 999999999999999999999999999987643
Q ss_pred CCCcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCcccccccHHHHHHHHhccCchhh
Q 006982 460 IDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQD 539 (623)
Q Consensus 460 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 539 (623)
..... ....||+.|+|||.+.+..++.++||||||+++|||++|+.||......+... ..... +
T Consensus 165 ~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~--------~~~~~----~ 228 (278)
T 3cok_A 165 PHEKH----YTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLN--------KVVLA----D 228 (278)
T ss_dssp -------------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC-------------CCSS----C
T ss_pred CCCcc----eeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHHHHH--------HHhhc----c
Confidence 22111 12348899999999998889999999999999999999999997543321110 00000 0
Q ss_pred hhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHH
Q 006982 540 AIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQ 581 (623)
Q Consensus 540 ~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~ 581 (623)
... ....+.++. .++..|+. .||++|||++|+++
T Consensus 229 ---~~~-~~~~~~~~~---~li~~~l~-~dp~~Rps~~~~l~ 262 (278)
T 3cok_A 229 ---YEM-PSFLSIEAK---DLIHQLLR-RNPADRLSLSSVLD 262 (278)
T ss_dssp ---CCC-CTTSCHHHH---HHHHHHSC-SSGGGSCCHHHHTT
T ss_pred ---cCC-ccccCHHHH---HHHHHHcc-cCHhhCCCHHHHhc
Confidence 000 111233333 44556666 99999999999875
No 143
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=100.00 E-value=2.4e-38 Score=335.94 Aligned_cols=248 Identities=22% Similarity=0.323 Sum_probs=190.9
Q ss_pred ccCcccceeeccCccEEEEEEeCCCcEEEEEEecccc---ccHHHHHHHHHHhCCCC--CCCCcceeEEEEeCCeeeEEE
Q 006982 305 NSFSKNNIIGSGRTGTMYKALLEDGTSLMVKRLQDSQ---RSEKEFVAEMATLGSVK--NRNLVPLLGFCMAKKERLLVY 379 (623)
Q Consensus 305 ~~f~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~---~~~~~~~~e~~~l~~l~--h~niv~l~~~~~~~~~~~lV~ 379 (623)
..|...+.||+|+||.||++...+++.||+|++.... ...+.+.+|++++.+++ ||||+++++++...+..++||
T Consensus 56 ~~y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~ 135 (390)
T 2zmd_A 56 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVM 135 (390)
T ss_dssp EEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred CceEEEEEEccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEEE
Confidence 4588899999999999999998889999999986543 33467899999999996 599999999999999999999
Q ss_pred ecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCC
Q 006982 380 KHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNP 459 (623)
Q Consensus 380 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~ 459 (623)
| +.+|+|.+++... ..+++..+..++.|++.||.|||+. +|+||||||+|||++ ++.+||+|||+++....
T Consensus 136 E-~~~~~L~~~l~~~----~~~~~~~~~~i~~qi~~aL~~lH~~---~ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~~ 206 (390)
T 2zmd_A 136 E-CGNIDLNSWLKKK----KSIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIV-DGMLKLIDFGIANQMQP 206 (390)
T ss_dssp E-CCSEEHHHHHHHC----SSCCHHHHHHHHHHHHHHHHHHHTT---TCCCCCCCGGGEEES-SSCEEECCCSSSCCC--
T ss_pred e-cCCCCHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHEEEE-CCeEEEEecCccccccC
Confidence 9 5688999999643 4688999999999999999999999 999999999999996 57899999999987653
Q ss_pred CCCcccccccCCCCcccccCcccccC-----------CCCCcchhHHHHHHHHHHHHhCCCCCCCCCCcccccccHHHHH
Q 006982 460 IDTHLSTFVNGEFGDLGYVAPEYART-----------LVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWI 528 (623)
Q Consensus 460 ~~~~~~~~~~~~~gt~~y~aPE~~~~-----------~~~s~k~DV~sfGvil~elltg~~P~~~~~~~~~~~~~l~~~~ 528 (623)
.... .......||+.|+|||++.+ ..++.++|||||||++|||++|+.||...... ...+
T Consensus 207 ~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~-------~~~~ 277 (390)
T 2zmd_A 207 DTTS--VVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQ-------ISKL 277 (390)
T ss_dssp ---------CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCCH-------HHHH
T ss_pred CCcc--ccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhHH-------HHHH
Confidence 2211 11233458999999999865 36889999999999999999999999643211 1111
Q ss_pred HHHhccCchhhhhchhhh---cCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHH
Q 006982 529 AQLSSTGQLQDAIDKCLV---AKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFL 583 (623)
Q Consensus 529 ~~~~~~~~~~~~~d~~l~---~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~L 583 (623)
.. +++.... .....++ +..++..|+. .||++|||+.|+++.-
T Consensus 278 ~~---------~~~~~~~~~~~~~~~~~---~~~li~~~L~-~dP~~Rps~~ell~hp 322 (390)
T 2zmd_A 278 HA---------IIDPNHEIEFPDIPEKD---LQDVLKCCLK-RDPKQRISIPELLAHP 322 (390)
T ss_dssp HH---------HHCTTSCCCCCCCSCHH---HHHHHHHHTC-SSTTTSCCHHHHHTSH
T ss_pred HH---------HhCccccCCCCccchHH---HHHHHHHHcc-cChhhCCCHHHHhhCc
Confidence 11 1111111 1112233 3444556776 9999999999998653
No 144
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=100.00 E-value=3.2e-38 Score=341.18 Aligned_cols=247 Identities=19% Similarity=0.218 Sum_probs=188.5
Q ss_pred hccCcccceeeccCccEEEEEEeC-CCcEEEEEEecccc----ccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEE
Q 006982 304 TNSFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQ----RSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLV 378 (623)
Q Consensus 304 ~~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV 378 (623)
.++|...+.||+|+||.||+|... +++.||+|++.... .....+.+|++++.+++||||+++++++.+.+..++|
T Consensus 147 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv 226 (446)
T 4ejn_A 147 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFV 226 (446)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEEEE
T ss_pred hHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEEE
Confidence 367899999999999999999964 68999999997532 2345678899999999999999999999999999999
Q ss_pred EecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHh-cCCCCcEecCCCCCceeeCCCCCeEEeeccccccc
Q 006982 379 YKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHH-NCNPRIIHRNISSKCILLDDDFEPKISDFGLARLM 457 (623)
Q Consensus 379 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~-~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~ 457 (623)
|||+++|+|.+++.. ...+++..+..++.|++.||+|||+ . +|+||||||+|||++.++.+||+|||+++..
T Consensus 227 ~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~qi~~aL~~LH~~~---giiHrDlkp~NIll~~~~~~kl~DFG~a~~~ 299 (446)
T 4ejn_A 227 MEYANGGELFFHLSR----ERVFSEDRARFYGAEIVSALDYLHSEK---NVVYRDLKLENLMLDKDGHIKITDFGLCKEG 299 (446)
T ss_dssp ECCCSSCBHHHHHHH----HSCCCHHHHHHHHHHHHHHHHHHHHHT---CCCCCCCCGGGEEECSSSCEEECCCCCCCTT
T ss_pred EeeCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHhhcC---CEEECCCCHHHEEECCCCCEEEccCCCceec
Confidence 999999999999853 3468999999999999999999998 7 8999999999999999999999999999864
Q ss_pred CCCCCcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCcccccccHHHHHHHHhccCch
Q 006982 458 NPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQL 537 (623)
Q Consensus 458 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~ 537 (623)
..... ......||+.|+|||++.+..++.++|||||||++|||++|+.||..... ........... .
T Consensus 300 ~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~--------~~~~~~i~~~~-~ 366 (446)
T 4ejn_A 300 IKDGA----TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH--------EKLFELILMEE-I 366 (446)
T ss_dssp CC---------CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH--------HHHHHHHHHCC-C
T ss_pred cCCCc----ccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCCH--------HHHHHHHHhCC-C
Confidence 33221 12334589999999999999999999999999999999999999975321 11111111110 0
Q ss_pred hhhhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCC-----CHHHHHH
Q 006982 538 QDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERP-----TMFEVYQ 581 (623)
Q Consensus 538 ~~~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RP-----s~~ev~~ 581 (623)
.. ....++++.++ +..|+. .||++|| +++|+++
T Consensus 367 ------~~-p~~~~~~~~~l---i~~~L~-~dP~~R~~~~~~t~~ell~ 404 (446)
T 4ejn_A 367 ------RF-PRTLGPEAKSL---LSGLLK-KDPKQRLGGGSEDAKEIMQ 404 (446)
T ss_dssp ------CC-CTTSCHHHHHH---HHHHTC-SSTTTSTTCSTTTHHHHHT
T ss_pred ------CC-CccCCHHHHHH---HHHHcc-cCHHHhCCCCCCCHHHHHh
Confidence 00 11123344444 445655 9999999 9999876
No 145
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=100.00 E-value=1.8e-38 Score=356.44 Aligned_cols=250 Identities=24% Similarity=0.365 Sum_probs=193.1
Q ss_pred ceeeccCccEEEEEEeC---CCcEEEEEEecccc---ccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEEecCCC
Q 006982 311 NIIGSGRTGTMYKALLE---DGTSLMVKRLQDSQ---RSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKHMPN 384 (623)
Q Consensus 311 ~~lG~G~~g~Vy~~~~~---~~~~vavK~~~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~ 384 (623)
+.||+|+||.||+|.+. .++.||||+++... ...+++.+|++++.+++|||||++++++.. +..++||||+++
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-~~~~lv~E~~~~ 453 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAEL 453 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEEEEECCTT
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec-CCEEEEEEccCC
Confidence 47999999999999653 46789999997643 335789999999999999999999999964 557899999999
Q ss_pred CCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCCCCCcc
Q 006982 385 GSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHL 464 (623)
Q Consensus 385 gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~~~~~~ 464 (623)
|+|.+++.. ...+++..++.++.|++.||+|||+. +|+||||||+|||+++++.+||+|||+++.+.......
T Consensus 454 g~L~~~l~~----~~~l~~~~~~~i~~qi~~~L~yLH~~---~iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~~ 526 (635)
T 4fl3_A 454 GPLNKYLQQ----NRHVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYY 526 (635)
T ss_dssp EEHHHHHHH----CTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCTTHHHHTTC-----
T ss_pred CCHHHHHhh----CCCCCHHHHHHHHHHHHHHHHHHHHC---CEeCCCCChHhEEEeCCCCEEEEEcCCccccccCcccc
Confidence 999999963 35689999999999999999999999 99999999999999999999999999998765432211
Q ss_pred cccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCcccccccHHHHHHHHhccCchhhhhch
Q 006982 465 STFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVT-GERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAIDK 543 (623)
Q Consensus 465 ~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~ellt-g~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~ 543 (623)
. ......+|+.|+|||++....++.++|||||||++|||++ |+.||...... +........ ....
T Consensus 527 ~-~~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~--------~~~~~i~~~-~~~~---- 592 (635)
T 4fl3_A 527 K-AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGS--------EVTAMLEKG-ERMG---- 592 (635)
T ss_dssp ---------CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHH--------HHHHHHHTT-CCCC----
T ss_pred c-cccCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHH--------HHHHHHHcC-CCCC----
Confidence 1 1122336789999999999999999999999999999998 99999753221 111111111 0000
Q ss_pred hhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHhhc
Q 006982 544 CLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAIGE 588 (623)
Q Consensus 544 ~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~L~~i~~ 588 (623)
.....++++. +++..|+. .||++||++++|++.|+++-.
T Consensus 593 --~p~~~~~~l~---~li~~cl~-~dP~~RPs~~~l~~~L~~~~~ 631 (635)
T 4fl3_A 593 --CPAGCPREMY---DLMNLCWT-YDVENRPGFAAVELRLRNYYY 631 (635)
T ss_dssp --CCTTCCHHHH---HHHHHHTC-SSTTTSCCHHHHHHHHHHHHH
T ss_pred --CCCCCCHHHH---HHHHHHcC-CCHhHCcCHHHHHHHHHHHHH
Confidence 0112334444 44456776 999999999999999998754
No 146
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=100.00 E-value=1.1e-38 Score=330.50 Aligned_cols=263 Identities=22% Similarity=0.365 Sum_probs=199.4
Q ss_pred hccCcccceeeccCccEEEEEEe------CCCcEEEEEEeccc--cccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCee
Q 006982 304 TNSFSKNNIIGSGRTGTMYKALL------EDGTSLMVKRLQDS--QRSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKER 375 (623)
Q Consensus 304 ~~~f~~~~~lG~G~~g~Vy~~~~------~~~~~vavK~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 375 (623)
.++|...+.||+|+||.||+|.. .++..||+|++... ......+.+|+.++.+++||||+++++++.+....
T Consensus 29 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 108 (327)
T 2yfx_A 29 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPR 108 (327)
T ss_dssp GGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred hhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCCCc
Confidence 35788899999999999999984 35678999999643 23456788999999999999999999999999999
Q ss_pred eEEEecCCCCCHhhhccCCCCC---CCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCC---CCCeEEe
Q 006982 376 LLVYKHMPNGSLYDLLHPADDT---GKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDD---DFEPKIS 449 (623)
Q Consensus 376 ~lV~e~~~~gsL~~~l~~~~~~---~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~---~~~~kl~ 449 (623)
++||||+++|+|.+++...... ...+++..++.++.|++.||.|||+. +|+||||||+||+++. +..+||+
T Consensus 109 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~---~i~H~dlkp~NIli~~~~~~~~~kl~ 185 (327)
T 2yfx_A 109 FILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIG 185 (327)
T ss_dssp EEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCEEEC
T ss_pred EEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhC---CeecCcCCHhHEEEecCCCcceEEEC
Confidence 9999999999999999754321 24589999999999999999999999 9999999999999984 4569999
Q ss_pred ecccccccCCCCCcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCcccccccHHHHH
Q 006982 450 DFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVT-GERPTNVAKAPETFKGNLVEWI 528 (623)
Q Consensus 450 Dfgla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~ellt-g~~P~~~~~~~~~~~~~l~~~~ 528 (623)
|||+++......... ......+|+.|+|||.+.+..++.++||||||+++|||+| |+.||...... .....+
T Consensus 186 Dfg~~~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~-----~~~~~~ 258 (327)
T 2yfx_A 186 DFGMARDIYRASYYR--KGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQ-----EVLEFV 258 (327)
T ss_dssp CCHHHHHHHC--------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH-----HHHHHH
T ss_pred ccccccccccccccc--cCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcCHH-----HHHHHH
Confidence 999998653321111 1112347889999999988899999999999999999998 99998653211 111111
Q ss_pred HHHhccCchhhhhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHhhccc
Q 006982 529 AQLSSTGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAIGERY 590 (623)
Q Consensus 529 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~L~~i~~~~ 590 (623)
. ..... . .....+++ +.+++..|+. .||++||++.|+++.|+.+....
T Consensus 259 ~---~~~~~-~------~~~~~~~~---l~~li~~~l~-~dp~~Rps~~~ll~~l~~~~~~~ 306 (327)
T 2yfx_A 259 T---SGGRM-D------PPKNCPGP---VYRIMTQCWQ-HQPEDRPNFAIILERIEYCTQDP 306 (327)
T ss_dssp H---TTCCC-C------CCTTCCHH---HHHHHHHHTC-SSGGGSCCHHHHHHHHHHHHHCH
T ss_pred h---cCCCC-C------CCCCCCHH---HHHHHHHHhc-CChhhCcCHHHHHHHHHHHhcCH
Confidence 1 11000 0 01112333 3445556776 99999999999999999886543
No 147
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=100.00 E-value=4.9e-38 Score=326.65 Aligned_cols=241 Identities=23% Similarity=0.335 Sum_probs=195.3
Q ss_pred HhccCcccceeeccCccEEEEEEe-CCCcEEEEEEeccccc---------cHHHHHHHHHHhCCCCCCCCcceeEEEEeC
Q 006982 303 ATNSFSKNNIIGSGRTGTMYKALL-EDGTSLMVKRLQDSQR---------SEKEFVAEMATLGSVKNRNLVPLLGFCMAK 372 (623)
Q Consensus 303 ~~~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---------~~~~~~~e~~~l~~l~h~niv~l~~~~~~~ 372 (623)
..++|...+.||+|+||.||+|.. .+++.||+|++..... ....+.+|++++.+++||||+++++++.+.
T Consensus 22 ~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~ 101 (335)
T 3dls_A 22 YSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQ 101 (335)
T ss_dssp HHHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECS
T ss_pred cccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeC
Confidence 356799999999999999999995 4788999999865431 233567899999999999999999999999
Q ss_pred CeeeEEEecCCCC-CHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeec
Q 006982 373 KERLLVYKHMPNG-SLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDF 451 (623)
Q Consensus 373 ~~~~lV~e~~~~g-sL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Df 451 (623)
+..++||||+.+| +|.+++.. ...+++..+..++.|++.||.|||+. +|+||||||+|||+++++.+||+||
T Consensus 102 ~~~~lv~e~~~~g~~l~~~~~~----~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~Df 174 (335)
T 3dls_A 102 GFFQLVMEKHGSGLDLFAFIDR----HPRLDEPLASYIFRQLVSAVGYLRLK---DIIHRDIKDENIVIAEDFTIKLIDF 174 (335)
T ss_dssp SEEEEEEECCTTSCBHHHHHHT----CCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCC
T ss_pred CEEEEEEEeCCCCccHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhC---CeEEeccCHHHEEEcCCCcEEEeec
Confidence 9999999999777 99999963 34689999999999999999999999 9999999999999999999999999
Q ss_pred ccccccCCCCCcccccccCCCCcccccCcccccCCCC-CcchhHHHHHHHHHHHHhCCCCCCCCCCcccccccHHHHHHH
Q 006982 452 GLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVA-TPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQ 530 (623)
Q Consensus 452 gla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-s~k~DV~sfGvil~elltg~~P~~~~~~~~~~~~~l~~~~~~ 530 (623)
|+++........ ....||+.|+|||++.+..+ +.++||||||+++|||++|+.||.....
T Consensus 175 g~a~~~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~-------------- 235 (335)
T 3dls_A 175 GSAAYLERGKLF-----YTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEE-------------- 235 (335)
T ss_dssp TTCEECCTTCCB-----CEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGG--------------
T ss_pred ccceECCCCCce-----eccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHH--------------
Confidence 999876543221 12348999999999988776 7899999999999999999999964211
Q ss_pred HhccCchhhhhchhh-hcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHH
Q 006982 531 LSSTGQLQDAIDKCL-VAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQF 582 (623)
Q Consensus 531 ~~~~~~~~~~~d~~l-~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~ 582 (623)
...... .....++++.++ +..|+. .||++|||+.|+++.
T Consensus 236 ---------~~~~~~~~~~~~~~~l~~l---i~~~L~-~dP~~Rps~~ell~h 275 (335)
T 3dls_A 236 ---------TVEAAIHPPYLVSKELMSL---VSGLLQ-PVPERRTTLEKLVTD 275 (335)
T ss_dssp ---------GTTTCCCCSSCCCHHHHHH---HHHHTC-SSGGGSCCHHHHHHC
T ss_pred ---------HHhhccCCCcccCHHHHHH---HHHHcc-CChhhCcCHHHHhcC
Confidence 000000 011133444444 445666 999999999999874
No 148
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=100.00 E-value=1.1e-37 Score=337.76 Aligned_cols=244 Identities=20% Similarity=0.377 Sum_probs=197.8
Q ss_pred ccCcccceeeccCccEEEEEEeC-CCcEEEEEEecccc----ccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEE
Q 006982 305 NSFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQ----RSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVY 379 (623)
Q Consensus 305 ~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 379 (623)
++|...+.||+|+||.||+|... +|+.||+|++.... .....+.+|+++++.++||||+++++++.+.+..++||
T Consensus 16 ~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv~ 95 (476)
T 2y94_A 16 GHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVM 95 (476)
T ss_dssp TTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEE
Confidence 56888899999999999999975 79999999996532 23567889999999999999999999999999999999
Q ss_pred ecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCC
Q 006982 380 KHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNP 459 (623)
Q Consensus 380 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~ 459 (623)
||+++|+|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++....
T Consensus 96 E~~~gg~L~~~l~~----~~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDLkp~NIll~~~~~vkL~DFG~a~~~~~ 168 (476)
T 2y94_A 96 EYVSGGELFDYICK----NGRLDEKESRRLFQQILSGVDYCHRH---MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSD 168 (476)
T ss_dssp ECCSSEEHHHHTTS----SSSCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCSGGGEEECTTCCEEECCCSSCEECCT
T ss_pred eCCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CCCcccccHHHEEEecCCCeEEEeccchhhccc
Confidence 99999999999963 35689999999999999999999999 999999999999999999999999999987654
Q ss_pred CCCcccccccCCCCcccccCcccccCCCC-CcchhHHHHHHHHHHHHhCCCCCCCCCCcccccccHHHHHHHHhccCchh
Q 006982 460 IDTHLSTFVNGEFGDLGYVAPEYARTLVA-TPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQ 538 (623)
Q Consensus 460 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-s~k~DV~sfGvil~elltg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 538 (623)
.. ......||+.|+|||++.+..+ +.++||||+||++|||++|+.||...... .........
T Consensus 169 ~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~--------~~~~~i~~~---- 231 (476)
T 2y94_A 169 GE-----FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVP--------TLFKKICDG---- 231 (476)
T ss_dssp TC-----CBCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSSH--------HHHHHHHTT----
T ss_pred cc-----cccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCHH--------HHHHHHhcC----
Confidence 22 1223458999999999988765 68999999999999999999999753321 111111110
Q ss_pred hhhchhh-hcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHH
Q 006982 539 DAIDKCL-VAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQ 581 (623)
Q Consensus 539 ~~~d~~l-~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~ 581 (623)
.. .....+.++..+ +..|+. .||++|||+.|+++
T Consensus 232 -----~~~~p~~~s~~~~~L---i~~~L~-~dP~~Rpt~~eil~ 266 (476)
T 2y94_A 232 -----IFYTPQYLNPSVISL---LKHMLQ-VDPMKRATIKDIRE 266 (476)
T ss_dssp -----CCCCCTTCCHHHHHH---HHHHTC-SSTTTSCCHHHHHT
T ss_pred -----CcCCCccCCHHHHHH---HHHHcC-CCchhCcCHHHHHh
Confidence 00 011123444444 445665 99999999999987
No 149
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=100.00 E-value=1.1e-37 Score=320.44 Aligned_cols=199 Identities=25% Similarity=0.333 Sum_probs=169.6
Q ss_pred ccCcccceeeccCccEEEEEEeC-CCcEEEEEEeccccc---cHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEEe
Q 006982 305 NSFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQR---SEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYK 380 (623)
Q Consensus 305 ~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e 380 (623)
++|...+.||+|+||.||+|... +++.||+|++..... ..+.+.+|++++.+++||||+++++++.+.+..++|||
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 82 (311)
T 4agu_A 3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVFE 82 (311)
T ss_dssp CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred ccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEEE
Confidence 57888999999999999999975 589999999865432 24567899999999999999999999999999999999
Q ss_pred cCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCCC
Q 006982 381 HMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPI 460 (623)
Q Consensus 381 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~~ 460 (623)
|+++++|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 83 ~~~~~~l~~~~~~----~~~~~~~~~~~i~~~l~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 155 (311)
T 4agu_A 83 YCDHTVLHELDRY----QRGVPEHLVKSITWQTLQAVNFCHKH---NCIHRDVKPENILITKHSVIKLCDFGFARLLTGP 155 (311)
T ss_dssp CCSEEHHHHHHHT----SSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECC--
T ss_pred eCCCchHHHHHhh----hcCCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCChhhEEEcCCCCEEEeeCCCchhccCc
Confidence 9999999998853 34589999999999999999999999 9999999999999999999999999999876532
Q ss_pred CCcccccccCCCCcccccCcccccC-CCCCcchhHHHHHHHHHHHHhCCCCCCCC
Q 006982 461 DTHLSTFVNGEFGDLGYVAPEYART-LVATPKGDVYSFGTVLLELVTGERPTNVA 514 (623)
Q Consensus 461 ~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~k~DV~sfGvil~elltg~~P~~~~ 514 (623)
... .....||+.|+|||++.+ ..++.++||||||+++|||++|+.||...
T Consensus 156 ~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~ 206 (311)
T 4agu_A 156 SDY----YDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGK 206 (311)
T ss_dssp --------------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred ccc----cCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCC
Confidence 221 123358999999999875 66899999999999999999999999764
No 150
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=100.00 E-value=2e-37 Score=320.19 Aligned_cols=250 Identities=21% Similarity=0.300 Sum_probs=198.5
Q ss_pred hccCcccceeeccCccEEEEEEeC-CCcEEEEEEecccc-------ccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCee
Q 006982 304 TNSFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQ-------RSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKER 375 (623)
Q Consensus 304 ~~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-------~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 375 (623)
.+.|...+.||+|+||.||+|... ++..||+|.+.... ...+.+.+|++++.+++||||+++++++.+....
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 90 (321)
T 2a2a_A 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDV 90 (321)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred hccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEE
Confidence 356888999999999999999965 68999999986532 1367899999999999999999999999999999
Q ss_pred eEEEecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCC----CeEEeec
Q 006982 376 LLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDF----EPKISDF 451 (623)
Q Consensus 376 ~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~----~~kl~Df 451 (623)
++||||+++++|.+++.. ...+++..++.++.|++.||+|||+. +|+||||||+||++++++ .+||+||
T Consensus 91 ~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~aL~~lH~~---~ivH~dikp~NIl~~~~~~~~~~~kl~Df 163 (321)
T 2a2a_A 91 VLILELVSGGELFDFLAQ----KESLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDF 163 (321)
T ss_dssp EEEECCCCSCBHHHHHHT----CSCEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCTTSSSCCEEECCC
T ss_pred EEEEEcCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCChHHEEEecCCCCcCCEEEccC
Confidence 999999999999999963 35689999999999999999999999 999999999999999888 7999999
Q ss_pred ccccccCCCCCcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCcccccccHHHHHHHH
Q 006982 452 GLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQL 531 (623)
Q Consensus 452 gla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~~~~~~~~~~~l~~~~~~~ 531 (623)
|+++....... .....||+.|+|||.+.+..++.++||||||+++|||++|+.||..... .+.....
T Consensus 164 g~~~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~--------~~~~~~i 230 (321)
T 2a2a_A 164 GLAHEIEDGVE-----FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTK--------QETLANI 230 (321)
T ss_dssp TTCEECCTTCC-----CCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSH--------HHHHHHH
T ss_pred ccceecCcccc-----ccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCCH--------HHHHHHH
Confidence 99987654221 1233589999999999998999999999999999999999999965321 1111111
Q ss_pred hccCchhhhhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHH
Q 006982 532 SSTGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQ 581 (623)
Q Consensus 532 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~ 581 (623)
..... -.++... ...+++ +..++..|+. .||++|||+.|+++
T Consensus 231 ~~~~~---~~~~~~~-~~~~~~---~~~li~~~l~-~dp~~Rps~~e~l~ 272 (321)
T 2a2a_A 231 TSVSY---DFDEEFF-SHTSEL---AKDFIRKLLV-KETRKRLTIQEALR 272 (321)
T ss_dssp HTTCC---CCCHHHH-TTCCHH---HHHHHHTTSC-SSTTTSCCHHHHHH
T ss_pred Hhccc---ccChhhh-cccCHH---HHHHHHHHcC-CChhhCcCHHHHhc
Confidence 11000 0001110 112233 3344556766 99999999999976
No 151
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=100.00 E-value=6.6e-39 Score=324.06 Aligned_cols=256 Identities=21% Similarity=0.306 Sum_probs=197.2
Q ss_pred hccCcccceeeccCccEEEEEEeC-CCcEEEEEEecccc---ccHHHHHHHHHHhCCCCCCCCcceeEEEEe--CCeeeE
Q 006982 304 TNSFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQ---RSEKEFVAEMATLGSVKNRNLVPLLGFCMA--KKERLL 377 (623)
Q Consensus 304 ~~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~--~~~~~l 377 (623)
.++|...+.||+|+||.||++... +++.|++|.+.... ...+.+.+|++++.+++||||+++++++.+ ....++
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 84 (279)
T 2w5a_A 5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYI 84 (279)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEE
T ss_pred hhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEE
Confidence 357888999999999999999975 68999999996543 334678899999999999999999998864 567899
Q ss_pred EEecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCC-----cEecCCCCCceeeCCCCCeEEeecc
Q 006982 378 VYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPR-----IIHRNISSKCILLDDDFEPKISDFG 452 (623)
Q Consensus 378 V~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~-----i~H~dlk~~NILl~~~~~~kl~Dfg 452 (623)
||||+++|+|.+++.........+++..++.++.|++.||+|||+. + |+||||||+||+++.++.+||+|||
T Consensus 85 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg 161 (279)
T 2w5a_A 85 VMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRR---SDGGHTVLHRDLKPANVFLDGKQNVKLGDFG 161 (279)
T ss_dssp EEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHH---C------CCCCCSGGGEEECSSSCEEECCCC
T ss_pred EEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcc---cCCCCeeEEeccchhhEEEcCCCCEEEecCc
Confidence 9999999999999965433345689999999999999999999998 7 9999999999999999999999999
Q ss_pred cccccCCCCCcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCcccccccHHHHHHHHh
Q 006982 453 LARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLS 532 (623)
Q Consensus 453 la~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~~~~~~~~~~~l~~~~~~~~ 532 (623)
+++......... ....|++.|+|||.+.+..++.++||||||+++|||++|+.||..... ..+...+..
T Consensus 162 ~~~~~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~-----~~~~~~i~~-- 230 (279)
T 2w5a_A 162 LARILNHDTSFA----KTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQ-----KELAGKIRE-- 230 (279)
T ss_dssp HHHHC---CHHH----HHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSH-----HHHHHHHHH--
T ss_pred hheeeccccccc----cccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccCH-----HHHHHHHhh--
Confidence 998765422111 122378999999999988899999999999999999999999975321 111111111
Q ss_pred ccCchhhhhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHH
Q 006982 533 STGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRA 585 (623)
Q Consensus 533 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~L~~ 585 (623)
.... .+ ....++++. +++..|+. .||++||++.|+++.+..
T Consensus 231 --~~~~-----~~-~~~~~~~l~---~li~~~l~-~~p~~Rps~~~ll~~~~~ 271 (279)
T 2w5a_A 231 --GKFR-----RI-PYRYSDELN---EIITRMLN-LKDYHRPSVEEILENPLI 271 (279)
T ss_dssp --TCCC-----CC-CTTSCHHHH---HHHHHHTC-SSGGGSCCHHHHHTSTTC
T ss_pred --cccc-----cC-CcccCHHHH---HHHHHHcC-CCcccCCCHHHHHhChhh
Confidence 1100 00 011233444 44456776 999999999999986643
No 152
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=100.00 E-value=6.6e-38 Score=316.92 Aligned_cols=247 Identities=23% Similarity=0.345 Sum_probs=194.9
Q ss_pred hccCcccceeeccCccEEEEEEeC-CCcEEEEEEecccc----ccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEE
Q 006982 304 TNSFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQ----RSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLV 378 (623)
Q Consensus 304 ~~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV 378 (623)
.++|...+.||+|+||.||+|... ++..||+|++.... .....+.+|++++.+++||||+++++++.+....++|
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 87 (279)
T 3fdn_A 8 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLI 87 (279)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred cccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEEE
Confidence 367888999999999999999865 57789999986532 3356788999999999999999999999999999999
Q ss_pred EecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccC
Q 006982 379 YKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMN 458 (623)
Q Consensus 379 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~ 458 (623)
|||+++|+|.+++... ..+++..++.++.|++.||+|||+. +|+||||||+||+++.++.++|+|||++....
T Consensus 88 ~e~~~~~~l~~~l~~~----~~~~~~~~~~~~~qi~~~l~~LH~~---~i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~ 160 (279)
T 3fdn_A 88 LEYAPLGTVYRELQKL----SKFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAP 160 (279)
T ss_dssp ECCCTTEEHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHHTT---TCEECCCCGGGEEECTTSCEEECSCCEESCC-
T ss_pred EecCCCCcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHhC---CEecccCChHhEEEcCCCCEEEEeccccccCC
Confidence 9999999999998532 4589999999999999999999999 99999999999999999999999999986543
Q ss_pred CCCCcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCcccccccHHHHHHHHhccCchh
Q 006982 459 PIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQ 538 (623)
Q Consensus 459 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 538 (623)
.... ....||+.|+|||.+.+..++.++||||||+++|||++|+.||..... ...........
T Consensus 161 ~~~~------~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~--------~~~~~~~~~~~--- 223 (279)
T 3fdn_A 161 SSRR------TDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTY--------QETYKRISRVE--- 223 (279)
T ss_dssp -------------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSH--------HHHHHHHHHTC---
T ss_pred cccc------cccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCcH--------HHHHHHHHhCC---
Confidence 3211 123489999999999999999999999999999999999999974321 11111111000
Q ss_pred hhhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHH
Q 006982 539 DAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFL 583 (623)
Q Consensus 539 ~~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~L 583 (623)
... .....+++.+ ++..|+. .||++|||+.|+++.-
T Consensus 224 ----~~~-~~~~~~~~~~---li~~~l~-~~p~~Rps~~e~l~h~ 259 (279)
T 3fdn_A 224 ----FTF-PDFVTEGARD---LISRLLK-HNPSQRPMLREVLEHP 259 (279)
T ss_dssp ----CCC-CTTSCHHHHH---HHHHHCC-SSGGGSCCHHHHHHCH
T ss_pred ----CCC-CCcCCHHHHH---HHHHHhc-cChhhCCCHHHHhhCc
Confidence 000 1112334443 4445666 9999999999999753
No 153
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=100.00 E-value=7e-39 Score=341.25 Aligned_cols=210 Identities=20% Similarity=0.226 Sum_probs=180.1
Q ss_pred CHHHHHHHhccCcccceeeccCccEEEEEEeC-CCcEEEEEEecccc----ccHHHHHHHHHHhCCCCCCCCcceeEEEE
Q 006982 296 RLSDLMKATNSFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQ----RSEKEFVAEMATLGSVKNRNLVPLLGFCM 370 (623)
Q Consensus 296 ~~~~l~~~~~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~e~~~l~~l~h~niv~l~~~~~ 370 (623)
++.+.....++|...+.||+|+||.||+++.+ +++.||+|++.... .....+.+|.+++.+++||||+++++++.
T Consensus 52 ~~~~~~~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~ 131 (412)
T 2vd5_A 52 RLKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQ 131 (412)
T ss_dssp HHHHHSCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEE
T ss_pred hhhhccCChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEe
Confidence 34455556788999999999999999999975 68999999996532 22345788999999999999999999999
Q ss_pred eCCeeeEEEecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEee
Q 006982 371 AKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISD 450 (623)
Q Consensus 371 ~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~D 450 (623)
+.+..++||||+++|+|.+++... +..+++..+..++.|++.||+|||+. +|+||||||+|||++.++++||+|
T Consensus 132 ~~~~~~lVmE~~~gg~L~~~l~~~---~~~l~~~~~~~~~~qi~~aL~~LH~~---giiHrDLKp~NILld~~g~vkL~D 205 (412)
T 2vd5_A 132 DENYLYLVMEYYVGGDLLTLLSKF---GERIPAEMARFYLAEIVMAIDSVHRL---GYVHRDIKPDNILLDRCGHIRLAD 205 (412)
T ss_dssp CSSEEEEEECCCCSCBHHHHHHHH---SSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECC
T ss_pred eCCEEEEEEcCCCCCcHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecccCHHHeeecCCCCEEEee
Confidence 999999999999999999999632 24689999999999999999999999 999999999999999999999999
Q ss_pred cccccccCCCCCcccccccCCCCcccccCccccc-------CCCCCcchhHHHHHHHHHHHHhCCCCCCCC
Q 006982 451 FGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYAR-------TLVATPKGDVYSFGTVLLELVTGERPTNVA 514 (623)
Q Consensus 451 fgla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-------~~~~s~k~DV~sfGvil~elltg~~P~~~~ 514 (623)
||+++......... .....||+.|+|||++. ...++.++|||||||++|||++|+.||...
T Consensus 206 FGla~~~~~~~~~~---~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~ 273 (412)
T 2vd5_A 206 FGSCLKLRADGTVR---SLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYAD 273 (412)
T ss_dssp CTTCEECCTTSCEE---CSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCS
T ss_pred chhheeccCCCccc---cceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCC
Confidence 99998765432211 12345899999999987 457899999999999999999999999753
No 154
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=100.00 E-value=4.9e-38 Score=325.44 Aligned_cols=266 Identities=23% Similarity=0.376 Sum_probs=203.1
Q ss_pred ccCcccceeeccCccEEEEEEe-----CCCcEEEEEEecccc-ccHHHHHHHHHHhCCCCCCCCcceeEEEEeCC--eee
Q 006982 305 NSFSKNNIIGSGRTGTMYKALL-----EDGTSLMVKRLQDSQ-RSEKEFVAEMATLGSVKNRNLVPLLGFCMAKK--ERL 376 (623)
Q Consensus 305 ~~f~~~~~lG~G~~g~Vy~~~~-----~~~~~vavK~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~--~~~ 376 (623)
++|...+.||+|+||.||++.+ .+++.||+|++.... ...+.+.+|++++.+++||||+++++++...+ ..+
T Consensus 41 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 120 (326)
T 2w1i_A 41 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLK 120 (326)
T ss_dssp GGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----CCE
T ss_pred HHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCCceE
Confidence 5688889999999999999984 468899999997643 34567899999999999999999999987654 678
Q ss_pred EEEecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccc
Q 006982 377 LVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARL 456 (623)
Q Consensus 377 lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~ 456 (623)
+|+||+++|+|.+++... ...+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.
T Consensus 121 lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dikp~NIli~~~~~~kL~Dfg~~~~ 194 (326)
T 2w1i_A 121 LIMEYLPYGSLRDYLQKH---KERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKV 194 (326)
T ss_dssp EEECCCTTCBHHHHHHHS---TTSSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEEETTEEEECCCTTCEE
T ss_pred EEEECCCCCCHHHHHHhc---ccCCCHHHHHHHHHHHHHHHHHHHhC---CEeccCCCcceEEEcCCCcEEEecCcchhh
Confidence 999999999999999643 24589999999999999999999999 999999999999999999999999999987
Q ss_pred cCCCCCcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCcccccccHHHHHHHHhccC-
Q 006982 457 MNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTG- 535 (623)
Q Consensus 457 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~~~~~~~~~~~l~~~~~~~~~~~- 535 (623)
........ .......++..|+|||.+.+..++.++||||||+++|||+||..|+.... ..+........
T Consensus 195 ~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~---------~~~~~~~~~~~~ 264 (326)
T 2w1i_A 195 LPQDKEYY-KVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPP---------AEFMRMIGNDKQ 264 (326)
T ss_dssp CCSSCSEE-ECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHH---------HHHHHHHCTTCC
T ss_pred cccccccc-ccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCH---------HHHHHhhccccc
Confidence 65432211 11122346788999999988889999999999999999999999875311 00000000000
Q ss_pred ------chhhhhchhh---hcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHhhccc
Q 006982 536 ------QLQDAIDKCL---VAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAIGERY 590 (623)
Q Consensus 536 ------~~~~~~d~~l---~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~L~~i~~~~ 590 (623)
.+.+.+.... .....+++ +.+++..|+. .||++|||+.|+++.|++++++.
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---l~~li~~cl~-~dP~~Rps~~el~~~L~~l~~~l 324 (326)
T 2w1i_A 265 GQMIVFHLIELLKNNGRLPRPDGCPDE---IYMIMTECWN-NNVNQRPSFRDLALRVDQIRDQM 324 (326)
T ss_dssp THHHHHHHHHHHHTTCCCCCCTTCCHH---HHHHHHHHSC-SSGGGSCCHHHHHHHHHHHHHHH
T ss_pred hhhhHHHHHHHhhcCCCCCCCCcccHH---HHHHHHHHcC-CChhhCcCHHHHHHHHHHHHHHh
Confidence 0011111100 01122334 4445556777 99999999999999999987653
No 155
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=100.00 E-value=2e-37 Score=312.96 Aligned_cols=249 Identities=20% Similarity=0.283 Sum_probs=196.2
Q ss_pred hccCcccceeeccCccEEEEEEeC-CCcEEEEEEeccc-cccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEEec
Q 006982 304 TNSFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDS-QRSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKH 381 (623)
Q Consensus 304 ~~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 381 (623)
.++|...+.||+|+||.||+|... ++..+++|++... ....+.+.+|++++.+++||||+++++++.+....++||||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 87 (277)
T 3f3z_A 8 NQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMEL 87 (277)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred hhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEEEec
Confidence 356888999999999999999965 5778999998654 34567899999999999999999999999999999999999
Q ss_pred CCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceee---CCCCCeEEeecccccccC
Q 006982 382 MPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILL---DDDFEPKISDFGLARLMN 458 (623)
Q Consensus 382 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl---~~~~~~kl~Dfgla~~~~ 458 (623)
+++++|.+++.. ...+++..+..++.|++.||.|||+. +|+||||||+||++ +.++.+||+|||++....
T Consensus 88 ~~~~~L~~~~~~----~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~ 160 (277)
T 3f3z_A 88 CTGGELFERVVH----KRVFRESDAARIMKDVLSAVAYCHKL---NVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFK 160 (277)
T ss_dssp CCSCBHHHHHHH----HCSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSTTCCEEECCCTTCEECC
T ss_pred cCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHEEEecCCCCCcEEEEecccceecc
Confidence 999999999853 24589999999999999999999999 99999999999999 888999999999998765
Q ss_pred CCCCcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCcccccccHHHHHHHHhccCchh
Q 006982 459 PIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQ 538 (623)
Q Consensus 459 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 538 (623)
.... .....||+.|+|||.+.+. ++.++||||||+++|||++|+.||...... +..........
T Consensus 161 ~~~~-----~~~~~~t~~y~aPE~~~~~-~~~~~Di~slG~~l~~l~~g~~p~~~~~~~--------~~~~~~~~~~~-- 224 (277)
T 3f3z_A 161 PGKM-----MRTKVGTPYYVSPQVLEGL-YGPECDEWSAGVMMYVLLCGYPPFSAPTDS--------EVMLKIREGTF-- 224 (277)
T ss_dssp TTSC-----BCCCCSCTTTCCHHHHTTC-BCTTHHHHHHHHHHHHHHHSSCSSCCSSHH--------HHHHHHHHCCC--
T ss_pred Cccc-----hhccCCCCCccChHHhccc-CCchhhehhHHHHHHHHHHCCCCCCCCCHH--------HHHHHHHhCCC--
Confidence 4322 2234589999999998654 899999999999999999999999753221 11111111000
Q ss_pred hhhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHH
Q 006982 539 DAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQ 581 (623)
Q Consensus 539 ~~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~ 581 (623)
...... ....++++ ..++..|+. .||++|||+.|+++
T Consensus 225 ~~~~~~--~~~~~~~~---~~li~~~l~-~dp~~R~s~~~~l~ 261 (277)
T 3f3z_A 225 TFPEKD--WLNVSPQA---ESLIRRLLT-KSPKQRITSLQALE 261 (277)
T ss_dssp CCCHHH--HTTSCHHH---HHHHHHHTC-SSTTTSCCHHHHTT
T ss_pred CCCchh--hhcCCHHH---HHHHHHHcc-CChhhCcCHHHHhc
Confidence 000000 00123333 344456666 99999999999986
No 156
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=100.00 E-value=1.1e-37 Score=341.74 Aligned_cols=203 Identities=25% Similarity=0.370 Sum_probs=179.9
Q ss_pred ccCcccceeeccCccEEEEEEeC-CCcEEEEEEecccc----ccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEE
Q 006982 305 NSFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQ----RSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVY 379 (623)
Q Consensus 305 ~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 379 (623)
++|...++||+|+||.||+++.. +|+.||+|++.... .....+.+|++++.+++||||+++++++.+....++||
T Consensus 185 ~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lVm 264 (543)
T 3c4z_A 185 DWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLVM 264 (543)
T ss_dssp GGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEEEE
Confidence 57888899999999999999975 68999999996532 34567889999999999999999999999999999999
Q ss_pred ecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCC
Q 006982 380 KHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNP 459 (623)
Q Consensus 380 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~ 459 (623)
||+++|+|.+++.........+++..++.++.|++.||.|||+. +|+||||||+|||++.++.+||+|||+++....
T Consensus 265 E~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~---gIvHrDLKP~NILl~~~g~vkL~DFGla~~~~~ 341 (543)
T 3c4z_A 265 TIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVELKA 341 (543)
T ss_dssp CCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCTTCEECCT
T ss_pred EeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHc---CCcccCCChHHEEEeCCCCEEEeecceeeeccC
Confidence 99999999999975543446799999999999999999999999 999999999999999999999999999987654
Q ss_pred CCCcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCC
Q 006982 460 IDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVA 514 (623)
Q Consensus 460 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~~ 514 (623)
.... .....||+.|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 342 ~~~~----~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~ 392 (543)
T 3c4z_A 342 GQTK----TKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRAR 392 (543)
T ss_dssp TCCC----BCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCT
T ss_pred CCcc----cccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCC
Confidence 3221 12235899999999999999999999999999999999999999764
No 157
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=100.00 E-value=3.2e-38 Score=329.69 Aligned_cols=247 Identities=25% Similarity=0.344 Sum_probs=195.0
Q ss_pred ccCcccceeeccCccEEEEEEe-CCCcEEEEEEecccc----ccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEE
Q 006982 305 NSFSKNNIIGSGRTGTMYKALL-EDGTSLMVKRLQDSQ----RSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVY 379 (623)
Q Consensus 305 ~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~----~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 379 (623)
+.|...+.||+|+||.||+|.. .+++.||+|++.... ...+.+.+|++++.+++||||+++++++.+.+..++||
T Consensus 54 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 133 (348)
T 1u5q_A 54 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVM 133 (348)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEEE
Confidence 4588889999999999999995 578999999986432 22356889999999999999999999999999999999
Q ss_pred ecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCC
Q 006982 380 KHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNP 459 (623)
Q Consensus 380 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~ 459 (623)
||++ |+|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++....
T Consensus 134 e~~~-g~l~~~l~~~---~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~ 206 (348)
T 1u5q_A 134 EYCL-GSASDLLEVH---KKPLQEVEIAAVTHGALQGLAYLHSH---NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAP 206 (348)
T ss_dssp ECCS-EEHHHHHHHH---TSCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEEETTTEEEECCCTTCBSSSS
T ss_pred ecCC-CCHHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCEEEeeccCceecCC
Confidence 9997 6888887532 25689999999999999999999999 999999999999999999999999999987543
Q ss_pred CCCcccccccCCCCcccccCccccc---CCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCcccccccHHHHHHHHhccCc
Q 006982 460 IDTHLSTFVNGEFGDLGYVAPEYAR---TLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQ 536 (623)
Q Consensus 460 ~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~s~k~DV~sfGvil~elltg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~ 536 (623)
. ....||+.|+|||++. ...++.++|||||||++|||++|+.||..... ...........
T Consensus 207 ~--------~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~--------~~~~~~~~~~~- 269 (348)
T 1u5q_A 207 A--------NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNA--------MSALYHIAQNE- 269 (348)
T ss_dssp B--------CCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH--------HHHHHHHHHSC-
T ss_pred C--------CcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCh--------HHHHHHHHhcC-
Confidence 2 1234899999999984 56789999999999999999999999965321 11111111110
Q ss_pred hhhhhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHH
Q 006982 537 LQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLR 584 (623)
Q Consensus 537 ~~~~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~L~ 584 (623)
.+.+.....++++.. ++..|+. .||++|||++++++..-
T Consensus 270 -----~~~~~~~~~~~~l~~---li~~~l~-~dP~~Rps~~~ll~h~~ 308 (348)
T 1u5q_A 270 -----SPALQSGHWSEYFRN---FVDSCLQ-KIPQDRPTSEVLLKHRF 308 (348)
T ss_dssp -----CCCCCCTTSCHHHHH---HHHHHTC-SSGGGSCCHHHHTTCHH
T ss_pred -----CCCCCCCCCCHHHHH---HHHHHcc-cChhhCcCHHHHhhChh
Confidence 011111223344444 4446776 99999999999987543
No 158
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=100.00 E-value=5.1e-38 Score=330.70 Aligned_cols=247 Identities=23% Similarity=0.266 Sum_probs=187.1
Q ss_pred ccCcccceeeccCccEEEEEEeC-CCcEEEEEEecccc----ccHHHHHHHHHH-hCCCCCCCCcceeEEEEeCCeeeEE
Q 006982 305 NSFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQ----RSEKEFVAEMAT-LGSVKNRNLVPLLGFCMAKKERLLV 378 (623)
Q Consensus 305 ~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~e~~~-l~~l~h~niv~l~~~~~~~~~~~lV 378 (623)
++|...+.||+|+||.||+++.+ ++..||+|++.... .....+..|..+ +..++||||+++++++.+.+..++|
T Consensus 38 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~lv 117 (373)
T 2r5t_A 38 SDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFV 117 (373)
T ss_dssp GGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEEEE
T ss_pred hheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEEEE
Confidence 57889999999999999999975 58889999997643 223456677776 5778999999999999999999999
Q ss_pred EecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccC
Q 006982 379 YKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMN 458 (623)
Q Consensus 379 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~ 458 (623)
|||+++|+|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++...
T Consensus 118 ~E~~~gg~L~~~l~~----~~~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~ikL~DFG~a~~~~ 190 (373)
T 2r5t_A 118 LDYINGGELFYHLQR----ERCFLEPRARFYAAEIASALGYLHSL---NIVYRDLKPENILLDSQGHIVLTDFGLCKENI 190 (373)
T ss_dssp EECCCSCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCCBCGGGB
T ss_pred EeCCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEECCCCCEEEeeCccccccc
Confidence 999999999999963 24688999999999999999999999 99999999999999999999999999998643
Q ss_pred CCCCcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCcccccccHHHHHHHHhccCchh
Q 006982 459 PIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQ 538 (623)
Q Consensus 459 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 538 (623)
..... .....||+.|+|||++.+..++.++|||||||++|||++|+.||..... .+.......
T Consensus 191 ~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~--------~~~~~~i~~----- 253 (373)
T 2r5t_A 191 EHNST----TSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNT--------AEMYDNILN----- 253 (373)
T ss_dssp CCCCC----CCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSBH--------HHHHHHHHH-----
T ss_pred cCCCc----cccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCH--------HHHHHHHHh-----
Confidence 22111 2234589999999999999999999999999999999999999975321 111111111
Q ss_pred hhhchhhh-cCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHH
Q 006982 539 DAIDKCLV-AKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFL 583 (623)
Q Consensus 539 ~~~d~~l~-~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~L 583 (623)
..+. ......++..++ ..|+. .||++||++.+.++.+
T Consensus 254 ----~~~~~~~~~~~~~~~li---~~lL~-~dp~~R~~~~~~~~~i 291 (373)
T 2r5t_A 254 ----KPLQLKPNITNSARHLL---EGLLQ-KDRTKRLGAKDDFMEI 291 (373)
T ss_dssp ----SCCCCCSSSCHHHHHHH---HHHTC-SSGGGSTTTTTTHHHH
T ss_pred ----cccCCCCCCCHHHHHHH---HHHcc-cCHHhCCCCCCCHHHH
Confidence 1110 112334444444 34555 8999999986444333
No 159
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=100.00 E-value=2.5e-37 Score=317.41 Aligned_cols=201 Identities=26% Similarity=0.336 Sum_probs=168.3
Q ss_pred HhccCcccceeeccCccEEEEEEe-CCCcEEEEEEecccc------ccHHHHHHHHHHhCCCC---CCCCcceeEEEEeC
Q 006982 303 ATNSFSKNNIIGSGRTGTMYKALL-EDGTSLMVKRLQDSQ------RSEKEFVAEMATLGSVK---NRNLVPLLGFCMAK 372 (623)
Q Consensus 303 ~~~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~------~~~~~~~~e~~~l~~l~---h~niv~l~~~~~~~ 372 (623)
..++|...+.||+|+||+||+|.. .+++.||+|++.... .....+.+|++++++++ ||||+++++++...
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~ 86 (308)
T 3g33_A 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATS 86 (308)
T ss_dssp ---CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEEC
T ss_pred cccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeecc
Confidence 356899999999999999999995 578999999986432 12345667777776664 99999999999876
Q ss_pred C-----eeeEEEecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeE
Q 006982 373 K-----ERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPK 447 (623)
Q Consensus 373 ~-----~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~k 447 (623)
. ..++|+||++ |+|.+++..... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+|
T Consensus 87 ~~~~~~~~~lv~e~~~-~~L~~~~~~~~~--~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~Nil~~~~~~~k 160 (308)
T 3g33_A 87 RTDREIKVTLVFEHVD-QDLRTYLDKAPP--PGLPAETIKDLMRQFLRGLDFLHAN---CIVHRDLKPENILVTSGGTVK 160 (308)
T ss_dssp CSSSEEEEEEEEECCC-CBHHHHHHTCCT--TCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCTTTEEECTTSCEE
T ss_pred CCCCceeEEEEehhhh-cCHHHHHhhccC--CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCEE
Confidence 5 4689999997 599999975432 4489999999999999999999999 999999999999999999999
Q ss_pred EeecccccccCCCCCcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCC
Q 006982 448 ISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVA 514 (623)
Q Consensus 448 l~Dfgla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~~ 514 (623)
|+|||+++........ ....||+.|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 161 l~Dfg~a~~~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~ 222 (308)
T 3g33_A 161 LADFGLARIYSYQMAL-----TPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGN 222 (308)
T ss_dssp ECSCSCTTTSTTCCCS-----GGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCS
T ss_pred EeeCccccccCCCccc-----CCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCC
Confidence 9999999876432221 2234899999999999999999999999999999999999999754
No 160
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=100.00 E-value=2.2e-37 Score=313.67 Aligned_cols=251 Identities=20% Similarity=0.272 Sum_probs=197.6
Q ss_pred hccCcccceeeccCccEEEEEEeC-CCcEEEEEEecccc---ccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEE
Q 006982 304 TNSFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQ---RSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVY 379 (623)
Q Consensus 304 ~~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 379 (623)
.++|...+.||+|+||.||+|... ++..||+|++.... .....+.+|++++.+++||||+++++++.+....++|+
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 84 (284)
T 3kk8_A 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF 84 (284)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEEE
Confidence 467889999999999999999965 68999999996543 23456889999999999999999999999999999999
Q ss_pred ecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCC---eEEeecccccc
Q 006982 380 KHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFE---PKISDFGLARL 456 (623)
Q Consensus 380 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~---~kl~Dfgla~~ 456 (623)
||+++|+|.+.+.. ...+++..+..++.|++.||.|||+. +|+||||||+||+++.++. +||+|||++..
T Consensus 85 e~~~~~~l~~~~~~----~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~ 157 (284)
T 3kk8_A 85 DLVTGGELFEDIVA----REFYSEADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIE 157 (284)
T ss_dssp CCCCSCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESSSSTTCCEEECCCTTCEE
T ss_pred ecCCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CcCcCCCCHHHEEEecCCCCCcEEEeeceeeEE
Confidence 99999999998853 24689999999999999999999999 9999999999999986655 99999999987
Q ss_pred cCCCCCcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCcccccccHHHHHHHHhccCc
Q 006982 457 MNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQ 536 (623)
Q Consensus 457 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~ 536 (623)
...... .....||+.|+|||.+.+..++.++||||||+++|||++|+.||..... ............
T Consensus 158 ~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~--------~~~~~~~~~~~~ 224 (284)
T 3kk8_A 158 VNDSEA-----WHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQ--------HRLYAQIKAGAY 224 (284)
T ss_dssp CCSSCB-----CCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH--------HHHHHHHHHTCC
T ss_pred cccCcc-----ccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCch--------hHHHHHHHhccc
Confidence 654222 1234589999999999999999999999999999999999999965321 111111111000
Q ss_pred hhhhhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHH
Q 006982 537 LQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQF 582 (623)
Q Consensus 537 ~~~~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~ 582 (623)
....+. ....++++. .++..|+. .||++|||+.|+++.
T Consensus 225 --~~~~~~--~~~~~~~~~---~li~~~l~-~dp~~Rps~~~~l~h 262 (284)
T 3kk8_A 225 --DYPSPE--WDTVTPEAK---SLIDSMLT-VNPKKRITADQALKV 262 (284)
T ss_dssp --CCCTTT--TTTSCHHHH---HHHHHHSC-SSTTTSCCHHHHTTS
T ss_pred --cCCchh--hcccCHHHH---HHHHHHcc-cChhhCCCHHHHhcC
Confidence 000000 011234444 44456666 999999999999874
No 161
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=100.00 E-value=1e-37 Score=319.46 Aligned_cols=249 Identities=22% Similarity=0.359 Sum_probs=199.6
Q ss_pred ccCcccceeeccCccEEEEEEe-CCCcEEEEEEeccc--cccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEEec
Q 006982 305 NSFSKNNIIGSGRTGTMYKALL-EDGTSLMVKRLQDS--QRSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKH 381 (623)
Q Consensus 305 ~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 381 (623)
+.|...+.||+|+||.||+|.. .+++.||+|++... ....+.+.+|+.++.+++||||+++++++.+....++||||
T Consensus 22 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 101 (303)
T 3a7i_A 22 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEY 101 (303)
T ss_dssp GTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred HHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEEe
Confidence 4588889999999999999985 46899999998654 34467899999999999999999999999999999999999
Q ss_pred CCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCCCC
Q 006982 382 MPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPID 461 (623)
Q Consensus 382 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~~~ 461 (623)
+++++|.+++.. ..+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||++.......
T Consensus 102 ~~~~~L~~~~~~-----~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~ 173 (303)
T 3a7i_A 102 LGGGSALDLLEP-----GPLDETQIATILREILKGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQ 173 (303)
T ss_dssp CTTEEHHHHHTT-----SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECBTTB
T ss_pred CCCCcHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCChheEEECCCCCEEEeecccceecCccc
Confidence 999999999952 4689999999999999999999999 99999999999999999999999999998764322
Q ss_pred CcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCcccccccHHHHHHHHhccCchhhhh
Q 006982 462 THLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAI 541 (623)
Q Consensus 462 ~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 541 (623)
.. .....||+.|+|||++.+..++.++||||||+++|||++|+.||..... .......... .
T Consensus 174 ~~----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~--------~~~~~~~~~~-~----- 235 (303)
T 3a7i_A 174 IK----RNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHP--------MKVLFLIPKN-N----- 235 (303)
T ss_dssp CC----BCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH--------HHHHHHHHHS-C-----
T ss_pred cc----cCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCH--------HHHHHHhhcC-C-----
Confidence 11 1233589999999999999999999999999999999999999964321 1111111000 0
Q ss_pred chhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHH
Q 006982 542 DKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLR 584 (623)
Q Consensus 542 d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~L~ 584 (623)
.+.+. ...+.++ ..++..|+. .||++|||+.|+++..-
T Consensus 236 ~~~~~-~~~~~~l---~~li~~~l~-~dp~~Rps~~~ll~~~~ 273 (303)
T 3a7i_A 236 PPTLE-GNYSKPL---KEFVEACLN-KEPSFRPTAKELLKHKF 273 (303)
T ss_dssp CCCCC-SSCCHHH---HHHHHHHCC-SSGGGSCCHHHHTTCHH
T ss_pred CCCCc-cccCHHH---HHHHHHHcC-CChhhCcCHHHHhhChh
Confidence 00111 1223333 344456776 99999999999988643
No 162
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=6.3e-38 Score=316.36 Aligned_cols=244 Identities=18% Similarity=0.309 Sum_probs=174.7
Q ss_pred ccCcccceeeccCccEEEEEEe-CCCcEEEEEEecccc----ccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEE
Q 006982 305 NSFSKNNIIGSGRTGTMYKALL-EDGTSLMVKRLQDSQ----RSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVY 379 (623)
Q Consensus 305 ~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~----~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 379 (623)
++|...+.||+|+||.||+|.. .+++.||+|++.... ...+.+.+|++++++++||||+++++++.+.+..++||
T Consensus 13 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 92 (275)
T 2eue_A 13 GNYQIVKTLGEGSFAKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVI 92 (275)
T ss_dssp CCBCCCC---------EEEEECTTTCCEEEEEEECSCC-----CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSCEEEEE
T ss_pred cceEEEEEEEcCCCEEEEEEEECCCCCEEEEEEEEhhhcchHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCeEEEEe
Confidence 5688899999999999999985 478999999986542 33567889999999999999999999999999999999
Q ss_pred ecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCC
Q 006982 380 KHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNP 459 (623)
Q Consensus 380 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~ 459 (623)
||+ +++|.+++.. ...+++..+..++.|++.||.|||+. +|+||||||+||++++++.+||+|||++.....
T Consensus 93 e~~-~~~l~~~~~~----~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~ 164 (275)
T 2eue_A 93 EYA-GNELFDYIVQ----RDKMSEQEARRFFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTD 164 (275)
T ss_dssp ECC-CEEHHHHHHT----SSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTSCEEECCSSCC-----
T ss_pred hhc-CCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CCeeccCChHhEEECCCCCEEEeecccceeccC
Confidence 999 6788888753 34689999999999999999999999 999999999999999999999999999986543
Q ss_pred CCCcccccccCCCCcccccCcccccCCCC-CcchhHHHHHHHHHHHHhCCCCCCCCCCcccccccHHHHHHHHhccCchh
Q 006982 460 IDTHLSTFVNGEFGDLGYVAPEYARTLVA-TPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQ 538 (623)
Q Consensus 460 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-s~k~DV~sfGvil~elltg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 538 (623)
... .....||+.|+|||.+.+..+ +.++||||||+++|||++|+.||..... ............
T Consensus 165 ~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~--------~~~~~~~~~~~~-- 229 (275)
T 2eue_A 165 GNF-----LKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESI--------PVLFKNISNGVY-- 229 (275)
T ss_dssp ---------------CTTCCHHHHCC-----THHHHHHHHHHHHHHHHSSCSSCCSSH--------HHHHHHHHHTCC--
T ss_pred ccc-----ccCCCCCcCcCCceeeeCCCCCCcccchHHHHHHHHHHHhCCCCCCCCCH--------HHHHHHHHhCCC--
Confidence 221 123348999999999987765 7899999999999999999999975321 111111111000
Q ss_pred hhhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHH
Q 006982 539 DAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQ 581 (623)
Q Consensus 539 ~~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~ 581 (623)
. .....++++. .++..|+. .||++|||++|+++
T Consensus 230 -----~-~~~~~~~~~~---~li~~~l~-~dP~~Rps~~e~l~ 262 (275)
T 2eue_A 230 -----T-LPKFLSPGAA---GLIKRMLI-VNPLNRISIHEIMQ 262 (275)
T ss_dssp -----C-CCTTSCHHHH---HHHHHHSC-SSGGGSCCHHHHTT
T ss_pred -----C-CCccCCHHHH---HHHHHHhh-cCHhHCCCHHHHhh
Confidence 0 0111233333 44456666 99999999999975
No 163
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=100.00 E-value=3.6e-37 Score=311.97 Aligned_cols=257 Identities=22% Similarity=0.345 Sum_probs=200.1
Q ss_pred ccCcccceeeccCccEEEEEEeC-CCcEEEEEEecccc-------ccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeee
Q 006982 305 NSFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQ-------RSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERL 376 (623)
Q Consensus 305 ~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-------~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 376 (623)
++|...+.||+|+||.||++... +++.||+|.+.... ...+.+.+|++++.+++||||+++++++.+....+
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 84 (283)
T 3bhy_A 5 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVV 84 (283)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred hhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeEE
Confidence 46888999999999999999976 68999999986532 23678999999999999999999999999999999
Q ss_pred EEEecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCC----CeEEeecc
Q 006982 377 LVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDF----EPKISDFG 452 (623)
Q Consensus 377 lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~----~~kl~Dfg 452 (623)
+||||+++++|.+++.. ...+++..++.++.|++.||.|||+. +|+||||||+||+++.++ .+||+|||
T Consensus 85 lv~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~~~~kl~dfg 157 (283)
T 3bhy_A 85 LILELVSGGELFDFLAE----KESLTEDEATQFLKQILDGVHYLHSK---RIAHFDLKPENIMLLDKNVPNPRIKLIDFG 157 (283)
T ss_dssp EEEECCCSCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSSSSCCEEECCCT
T ss_pred EEEeecCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCChHHEEEecCCCCCCceEEEecc
Confidence 99999999999999953 24689999999999999999999999 999999999999999877 89999999
Q ss_pred cccccCCCCCcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCcccccccHHHHHHHHh
Q 006982 453 LARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLS 532 (623)
Q Consensus 453 la~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~~~~~~~~~~~l~~~~~~~~ 532 (623)
++........ .....|++.|+|||++.+..++.++||||||+++|||++|+.||..... .+......
T Consensus 158 ~~~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~--------~~~~~~~~ 224 (283)
T 3bhy_A 158 IAHKIEAGNE-----FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETK--------QETLTNIS 224 (283)
T ss_dssp TCEECC-------------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSH--------HHHHHHHH
T ss_pred cceeccCCCc-----ccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcch--------HHHHHHhH
Confidence 9987643221 1223489999999999988999999999999999999999999975321 11111111
Q ss_pred ccCchhhhhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHH--HHHHhhcc
Q 006982 533 STGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQ--FLRAIGER 589 (623)
Q Consensus 533 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~--~L~~i~~~ 589 (623)
.... . ...... ...+++ +..++..|+. .||++|||+.|+++ .++.++.+
T Consensus 225 ~~~~--~-~~~~~~-~~~~~~---~~~li~~~l~-~dp~~Rps~~~~l~h~~~~~~~~~ 275 (283)
T 3bhy_A 225 AVNY--D-FDEEYF-SNTSEL---AKDFIRRLLV-KDPKRRMTIAQSLEHSWIKAIRRR 275 (283)
T ss_dssp TTCC--C-CCHHHH-TTCCHH---HHHHHHTTSC-SSGGGSCCHHHHHHCHHHHHHHHC
T ss_pred hccc--C-Ccchhc-ccCCHH---HHHHHHHHcc-CCHhHCcCHHHHHhCHHHHHHHHH
Confidence 1000 0 000000 112233 3445556776 99999999999997 45666544
No 164
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=100.00 E-value=1.1e-37 Score=331.79 Aligned_cols=253 Identities=18% Similarity=0.246 Sum_probs=186.6
Q ss_pred ccCccc-ceeeccCccEEEEEEeC-CCcEEEEEEeccccccHHHHHHHHHHh-CCCCCCCCcceeEEEEe----CCeeeE
Q 006982 305 NSFSKN-NIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQRSEKEFVAEMATL-GSVKNRNLVPLLGFCMA----KKERLL 377 (623)
Q Consensus 305 ~~f~~~-~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~e~~~l-~~l~h~niv~l~~~~~~----~~~~~l 377 (623)
++|... ++||+|+||.||++... ++..||+|++... ..+.+|++++ +..+||||+++++++.. ....++
T Consensus 61 ~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~~----~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~~l 136 (400)
T 1nxk_A 61 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC----PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLI 136 (400)
T ss_dssp GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEE
T ss_pred ccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCcc----hhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEEEE
Confidence 345554 68999999999999965 6889999998643 3566788776 44589999999999876 456789
Q ss_pred EEecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCC---CCCeEEeecccc
Q 006982 378 VYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDD---DFEPKISDFGLA 454 (623)
Q Consensus 378 V~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~---~~~~kl~Dfgla 454 (623)
||||+++|+|.+++.... ...+++..+..++.|++.||.|||+. +|+||||||+|||++. ++.+||+|||++
T Consensus 137 v~E~~~gg~L~~~l~~~~--~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~~~~kl~DFG~a 211 (400)
T 1nxk_A 137 VMECLDGGELFSRIQDRG--DQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFGFA 211 (400)
T ss_dssp EEECCCSEEHHHHHHCC-----CCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSTTCCEEECCCTTC
T ss_pred EEEeCCCCcHHHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCcCcceEEEecCCCCccEEEEecccc
Confidence 999999999999997532 24689999999999999999999999 9999999999999997 789999999999
Q ss_pred cccCCCCCcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCcccccccHHHHHHHHhcc
Q 006982 455 RLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSST 534 (623)
Q Consensus 455 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~~~~~~~~~~~l~~~~~~~~~~ 534 (623)
+....... .....||+.|+|||++.+..++.++|||||||++|||++|+.||......... ......+......
T Consensus 212 ~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~-~~~~~~i~~~~~~ 285 (400)
T 1nxk_A 212 KETTSHNS-----LTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAIS-PGMKTRIRMGQYE 285 (400)
T ss_dssp EECC----------------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSC-CSHHHHHHHTCCC
T ss_pred cccCCCCc-----cccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCcccccc-HHHHHHHHcCccc
Confidence 87543211 12345899999999999999999999999999999999999999765433211 1122211111000
Q ss_pred CchhhhhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHH
Q 006982 535 GQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFL 583 (623)
Q Consensus 535 ~~~~~~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~L 583 (623)
...+. .....+++ ..++..|+. .||++|||+.|+++.-
T Consensus 286 -----~~~~~--~~~~s~~~---~~li~~~L~-~dP~~Rpt~~eil~hp 323 (400)
T 1nxk_A 286 -----FPNPE--WSEVSEEV---KMLIRNLLK-TEPTQRMTITEFMNHP 323 (400)
T ss_dssp -----CCTTT--TTTSCHHH---HHHHHTTSC-SSGGGSCCHHHHHHSH
T ss_pred -----CCCcc--cccCCHHH---HHHHHHHCC-CChhHCcCHHHHhcCc
Confidence 00000 01123333 344456666 9999999999998753
No 165
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=100.00 E-value=6.9e-38 Score=317.52 Aligned_cols=245 Identities=19% Similarity=0.288 Sum_probs=192.5
Q ss_pred hccCcccceeeccCccEEEEEEeC-CCcEEEEEEeccc---cccHHHHHHHHHHhCCC-CCCCCcceeEEEEeCCeeeEE
Q 006982 304 TNSFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDS---QRSEKEFVAEMATLGSV-KNRNLVPLLGFCMAKKERLLV 378 (623)
Q Consensus 304 ~~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lV 378 (623)
.++|...+.||+|+||.||+|... +++.||+|++... ......+.+|+..+.++ +||||+++++++.+.+..++|
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~lv 89 (289)
T 1x8b_A 10 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLIQ 89 (289)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEEE
T ss_pred cchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEE
Confidence 467899999999999999999975 7899999998753 23456788899999988 999999999999999999999
Q ss_pred EecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCC----------------
Q 006982 379 YKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDD---------------- 442 (623)
Q Consensus 379 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~---------------- 442 (623)
|||+++|+|.+++.........+++..++.++.|++.||+|||+. +|+||||||+||+++.
T Consensus 90 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~~ 166 (289)
T 1x8b_A 90 NEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSM---SLVHMDIKPSNIFISRTSIPNAASEEGDEDDW 166 (289)
T ss_dssp EECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEC-----------------
T ss_pred EEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhC---CEeecCCCHHHEEEcCCCCCcccccccccccc
Confidence 999999999999964322235689999999999999999999999 9999999999999984
Q ss_pred ---CCCeEEeecccccccCCCCCcccccccCCCCcccccCcccccCC-CCCcchhHHHHHHHHHHHHhCCCCCCCCCCcc
Q 006982 443 ---DFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTL-VATPKGDVYSFGTVLLELVTGERPTNVAKAPE 518 (623)
Q Consensus 443 ---~~~~kl~Dfgla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~k~DV~sfGvil~elltg~~P~~~~~~~~ 518 (623)
...+||+|||.+....... ...||+.|+|||.+.+. .++.++||||||+++|||++|..|+....
T Consensus 167 ~~~~~~~kl~Dfg~~~~~~~~~--------~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~--- 235 (289)
T 1x8b_A 167 ASNKVMFKIGDLGHVTRISSPQ--------VEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGD--- 235 (289)
T ss_dssp ---CCCEEECCCTTCEETTCSC--------CCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSSH---
T ss_pred cCCceEEEEcccccccccCCcc--------ccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcchh---
Confidence 4479999999998765422 12389999999999765 56689999999999999999998764310
Q ss_pred cccccHHHHHHHHhccCchhhhhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHH
Q 006982 519 TFKGNLVEWIAQLSSTGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQ 581 (623)
Q Consensus 519 ~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~ 581 (623)
....+ ...... .+ ....++++.+ ++..|+. .||++|||+.|+++
T Consensus 236 -----~~~~~----~~~~~~-----~~-~~~~~~~~~~---li~~~l~-~dp~~Rps~~~ll~ 279 (289)
T 1x8b_A 236 -----QWHEI----RQGRLP-----RI-PQVLSQEFTE---LLKVMIH-PDPERRPSAMALVK 279 (289)
T ss_dssp -----HHHHH----HTTCCC-----CC-SSCCCHHHHH---HHHHHTC-SSGGGSCCHHHHHT
T ss_pred -----HHHHH----HcCCCC-----CC-CcccCHHHHH---HHHHHhC-CCcccCCCHHHHhh
Confidence 00100 011110 01 1123344444 4446666 99999999999875
No 166
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=100.00 E-value=3.2e-37 Score=330.42 Aligned_cols=251 Identities=19% Similarity=0.288 Sum_probs=186.6
Q ss_pred HhccCcccceeeccCccEEEEEEeC-CCcEEEEEEeccccc---------cHHHHHHHHHHhCCCCCCCCcceeEEEEeC
Q 006982 303 ATNSFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQR---------SEKEFVAEMATLGSVKNRNLVPLLGFCMAK 372 (623)
Q Consensus 303 ~~~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---------~~~~~~~e~~~l~~l~h~niv~l~~~~~~~ 372 (623)
..++|...+.||+|+||.||+|... +++.||+|++..... ....+.+|++++.+++||||+++++++. .
T Consensus 133 ~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~-~ 211 (419)
T 3i6u_A 133 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFD-A 211 (419)
T ss_dssp HHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEE-S
T ss_pred hhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEe-c
Confidence 4578999999999999999999864 689999999865321 1224789999999999999999999975 4
Q ss_pred CeeeEEEecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCC---CCeEEe
Q 006982 373 KERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDD---FEPKIS 449 (623)
Q Consensus 373 ~~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~---~~~kl~ 449 (623)
+..++||||+++|+|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+|||++.+ +.+||+
T Consensus 212 ~~~~lv~e~~~~g~L~~~l~~----~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivHrDlkp~NIll~~~~~~~~~kl~ 284 (419)
T 3i6u_A 212 EDYYIVLELMEGGELFDKVVG----NKRLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKIT 284 (419)
T ss_dssp SEEEEEEECCTTCBGGGGTSS----SCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESSSSSSCCEEEC
T ss_pred CceEEEEEcCCCCcHHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEecCCCcceEEEe
Confidence 567999999999999999863 35689999999999999999999999 99999999999999754 459999
Q ss_pred ecccccccCCCCCcccccccCCCCcccccCcccccC---CCCCcchhHHHHHHHHHHHHhCCCCCCCCCCcccccccHHH
Q 006982 450 DFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYART---LVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVE 526 (623)
Q Consensus 450 Dfgla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~s~k~DV~sfGvil~elltg~~P~~~~~~~~~~~~~l~~ 526 (623)
|||+++...... ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||...... ..+..
T Consensus 285 DFG~a~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~----~~~~~ 355 (419)
T 3i6u_A 285 DFGHSKILGETS-----LMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQ----VSLKD 355 (419)
T ss_dssp CSSTTTSCC----------------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSS----CCHHH
T ss_pred ecccceecCCCc-----cccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcch----HHHHH
Confidence 999998765321 1223458999999999853 56788999999999999999999999754322 12222
Q ss_pred HHHHHhccCchhhhhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHH
Q 006982 527 WIAQLSSTGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQ 581 (623)
Q Consensus 527 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~ 581 (623)
.+...... ...+ .+ ....++ +..++..|+. .||++|||++|+++
T Consensus 356 ~i~~~~~~-~~~~----~~--~~~~~~---~~~li~~~L~-~dP~~Rps~~e~l~ 399 (419)
T 3i6u_A 356 QITSGKYN-FIPE----VW--AEVSEK---ALDLVKKLLV-VDPKARFTTEEALR 399 (419)
T ss_dssp HHHTTCCC-CCHH----HH--TTSCHH---HHHHHHHHSC-SSTTTSCCHHHHHH
T ss_pred HHhcCCCC-CCch----hh--cccCHH---HHHHHHHHcc-CChhHCcCHHHHhC
Confidence 21111000 0000 00 112233 3444556666 99999999999876
No 167
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=100.00 E-value=2.1e-37 Score=315.03 Aligned_cols=245 Identities=24% Similarity=0.312 Sum_probs=190.1
Q ss_pred cCcccceeeccCccEEEEEEeC-CCcEEEEEEecccc---ccHHHHHHHHHHhCCCCCCCCcceeEEEEe----CCeeeE
Q 006982 306 SFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQ---RSEKEFVAEMATLGSVKNRNLVPLLGFCMA----KKERLL 377 (623)
Q Consensus 306 ~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~----~~~~~l 377 (623)
.|...+.||+|+||.||+|... ++..|++|.+.... ...+.+.+|++++.+++||||+++++++.. ....++
T Consensus 27 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~l 106 (290)
T 1t4h_A 27 FLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVL 106 (290)
T ss_dssp EEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEE
T ss_pred eEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEEE
Confidence 3666788999999999999964 67889999986543 334678899999999999999999999875 345789
Q ss_pred EEecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCC--cEecCCCCCceeeC-CCCCeEEeecccc
Q 006982 378 VYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPR--IIHRNISSKCILLD-DDFEPKISDFGLA 454 (623)
Q Consensus 378 V~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~--i~H~dlk~~NILl~-~~~~~kl~Dfgla 454 (623)
||||+++|+|.+++.. ...+++..++.++.|++.||.|||+. + |+||||||+||+++ +++.+||+|||++
T Consensus 107 v~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~qi~~~l~~lH~~---~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~ 179 (290)
T 1t4h_A 107 VTELMTSGTLKTYLKR----FKVMKIKVLRSWCRQILKGLQFLHTR---TPPIIHRDLKCDNIFITGPTGSVKIGDLGLA 179 (290)
T ss_dssp EEECCCSCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHTS---SSCCCCSCCCGGGEEESSTTSCEEECCTTGG
T ss_pred EEEecCCCCHHHHHHH----ccCCCHHHHHHHHHHHHHHHHHHHcC---CCCEEECCCCHHHEEEECCCCCEEEeeCCCc
Confidence 9999999999999963 24688999999999999999999998 7 99999999999998 8899999999999
Q ss_pred cccCCCCCcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCcccccccHHHHHHHHhcc
Q 006982 455 RLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSST 534 (623)
Q Consensus 455 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~~~~~~~~~~~l~~~~~~~~~~ 534 (623)
........ ....||+.|+|||.+.+ .++.++||||||+++|||++|+.||...... ..........
T Consensus 180 ~~~~~~~~------~~~~~t~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~-------~~~~~~~~~~ 245 (290)
T 1t4h_A 180 TLKRASFA------KAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNA-------AQIYRRVTSG 245 (290)
T ss_dssp GGCCTTSB------EESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSH-------HHHHHHHTTT
T ss_pred cccccccc------ccccCCcCcCCHHHHhc-cCCCcchHHHHHHHHHHHHhCCCCCCCcCcH-------HHHHHHHhcc
Confidence 76543211 12348999999998864 5899999999999999999999999753221 1111111111
Q ss_pred CchhhhhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHH
Q 006982 535 GQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQ 581 (623)
Q Consensus 535 ~~~~~~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~ 581 (623)
.. .. .. .....++ +..++..|+. .||++|||+.|+++
T Consensus 246 ~~-~~----~~-~~~~~~~---l~~li~~~l~-~dp~~Rps~~ell~ 282 (290)
T 1t4h_A 246 VK-PA----SF-DKVAIPE---VKEIIEGCIR-QNKDERYSIKDLLN 282 (290)
T ss_dssp CC-CG----GG-GGCCCHH---HHHHHHHHSC-SSGGGSCCHHHHHT
T ss_pred CC-cc----cc-CCCCCHH---HHHHHHHHcc-CChhhCCCHHHHhh
Confidence 00 00 01 1112233 4455556776 99999999999975
No 168
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=100.00 E-value=1.2e-37 Score=342.37 Aligned_cols=252 Identities=24% Similarity=0.338 Sum_probs=199.6
Q ss_pred hccCcccceeeccCccEEEEEEeC-CCcEEEEEEeccc----cccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEE
Q 006982 304 TNSFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDS----QRSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLV 378 (623)
Q Consensus 304 ~~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~----~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV 378 (623)
.++|...++||+|+||.||++... +|+.||+|++... ......+.+|++++.+++||||+++++++.+.+..++|
T Consensus 183 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lV 262 (576)
T 2acx_A 183 KNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLV 262 (576)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEEE
Confidence 356888999999999999999975 7899999999653 23456788999999999999999999999999999999
Q ss_pred EecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccC
Q 006982 379 YKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMN 458 (623)
Q Consensus 379 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~ 458 (623)
|||+++|+|.+++.... ...+++..++.++.|++.||.|||+. +|+||||||+|||++.++.+||+|||+++...
T Consensus 263 mEy~~gg~L~~~l~~~~--~~~l~e~~~~~i~~qIl~aL~yLH~~---gIvHrDLKPeNILld~~g~vKL~DFGla~~~~ 337 (576)
T 2acx_A 263 LTLMNGGDLKFHIYHMG--QAGFPEARAVFYAAEICCGLEDLHRE---RIVYRDLKPENILLDDHGHIRISDLGLAVHVP 337 (576)
T ss_dssp ECCCCSCBHHHHHHSSS--SCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCTTCEECC
T ss_pred EEcCCCCcHHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHHHC---CEeccCCchheEEEeCCCCeEEEecccceecc
Confidence 99999999999986432 24589999999999999999999999 99999999999999999999999999998765
Q ss_pred CCCCcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCcccccccHHHHHHHHhccCchh
Q 006982 459 PIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQ 538 (623)
Q Consensus 459 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 538 (623)
.... .....||+.|+|||++.+..++.++|||||||++|||++|+.||........ ...+...+... ...
T Consensus 338 ~~~~-----~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~~-~~~i~~~i~~~--~~~-- 407 (576)
T 2acx_A 338 EGQT-----IKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIK-REEVERLVKEV--PEE-- 407 (576)
T ss_dssp TTCC-----EECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCCC-HHHHHHHHHHC--CCC--
T ss_pred cCcc-----ccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccchh-HHHHHHHhhcc--ccc--
Confidence 4321 1234689999999999998999999999999999999999999976432111 00111111110 000
Q ss_pred hhhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCC-----CHHHHHH
Q 006982 539 DAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERP-----TMFEVYQ 581 (623)
Q Consensus 539 ~~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RP-----s~~ev~~ 581 (623)
+ ....+.++..+++ .|+. .||++|| +++||++
T Consensus 408 ------~-p~~~s~~~~dLI~---~lL~-~dP~~R~g~~~~sa~eil~ 444 (576)
T 2acx_A 408 ------Y-SERFSPQARSLCS---QLLC-KDPAERLGCRGGSAREVKE 444 (576)
T ss_dssp ------C-CTTSCHHHHHHHH---HHTC-SSGGGSTTCSSSHHHHHHT
T ss_pred ------C-CccCCHHHHHHHH---Hhcc-CCHHHcCCCCCCCHHHHHh
Confidence 0 1123444544444 4555 8999999 6788765
No 169
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=100.00 E-value=6.1e-38 Score=318.70 Aligned_cols=253 Identities=21% Similarity=0.305 Sum_probs=182.0
Q ss_pred hccCcccceeeccCccEEEEEEe-CCCcEEEEEEeccccc--c-HHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEE
Q 006982 304 TNSFSKNNIIGSGRTGTMYKALL-EDGTSLMVKRLQDSQR--S-EKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVY 379 (623)
Q Consensus 304 ~~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~-~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 379 (623)
.++|...+.||+|+||.||++.. .+++.||+|++..... . ...+..+...++.++||||+++++++.+.+..++||
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~ 85 (290)
T 3fme_A 6 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICM 85 (290)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEEE
T ss_pred HHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEEE
Confidence 36788899999999999999996 4789999999975432 2 233445555688899999999999999999999999
Q ss_pred ecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCC
Q 006982 380 KHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNP 459 (623)
Q Consensus 380 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~ 459 (623)
||++ |+|.+++.........+++..++.++.|++.||+|||+++ +|+||||||+||+++.++.+||+|||+++....
T Consensus 86 e~~~-~~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~--~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 162 (290)
T 3fme_A 86 ELMD-TSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKL--SVIHRDVKPSNVLINALGQVKMCDFGISGYLVD 162 (290)
T ss_dssp ECCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHS--CCCCCCCSGGGCEECTTCCEEBCCC--------
T ss_pred ehhc-cchHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcC--CeecCCCCHHHEEECCCCCEEEeecCCcccccc
Confidence 9997 5888877543223467999999999999999999999853 899999999999999999999999999987644
Q ss_pred CCCcccccccCCCCcccccCcccc----cCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCcccccccHHHHHHHHhccC
Q 006982 460 IDTHLSTFVNGEFGDLGYVAPEYA----RTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTG 535 (623)
Q Consensus 460 ~~~~~~~~~~~~~gt~~y~aPE~~----~~~~~s~k~DV~sfGvil~elltg~~P~~~~~~~~~~~~~l~~~~~~~~~~~ 535 (623)
.... ....||+.|+|||++ ....++.++||||||+++|||++|+.||...... . ..........
T Consensus 163 ~~~~-----~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~------~-~~~~~~~~~~ 230 (290)
T 3fme_A 163 DVAK-----DIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTP------F-QQLKQVVEEP 230 (290)
T ss_dssp ------------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCH------H-HHHHHHHHSC
T ss_pred cccc-----cccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCch------H-HHHHHHhccC
Confidence 2211 123489999999996 5667899999999999999999999999743221 1 1111111110
Q ss_pred chhhhhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHH
Q 006982 536 QLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQ 581 (623)
Q Consensus 536 ~~~~~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~ 581 (623)
. +.......++++ .+++..|+. .||++|||+.|+++
T Consensus 231 ~------~~~~~~~~~~~~---~~li~~~l~-~~p~~Rpt~~e~l~ 266 (290)
T 3fme_A 231 S------PQLPADKFSAEF---VDFTSQCLK-KNSKERPTYPELMQ 266 (290)
T ss_dssp C------CCCCTTTSCHHH---HHHHHHHTC-SSGGGSCCHHHHTT
T ss_pred C------CCcccccCCHHH---HHHHHHHhh-cChhhCcCHHHHHh
Confidence 0 001111223333 444556776 99999999999987
No 170
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=100.00 E-value=6.3e-37 Score=322.18 Aligned_cols=253 Identities=20% Similarity=0.323 Sum_probs=197.1
Q ss_pred HHHhccCcccceeeccCccEEEEEEeC-CCcEEEEEEeccccc---------cHHHHHHHHHHhCCC-CCCCCcceeEEE
Q 006982 301 MKATNSFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQR---------SEKEFVAEMATLGSV-KNRNLVPLLGFC 369 (623)
Q Consensus 301 ~~~~~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---------~~~~~~~e~~~l~~l-~h~niv~l~~~~ 369 (623)
....++|...+.||+|+||.||+|... +|+.||||++..... ..+.+.+|+.++.++ +||||+++++++
T Consensus 90 ~~~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~ 169 (365)
T 2y7j_A 90 KEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSY 169 (365)
T ss_dssp HHHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEE
T ss_pred hhhhhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEEE
Confidence 445577999999999999999999975 799999999864321 135678899999998 799999999999
Q ss_pred EeCCeeeEEEecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEe
Q 006982 370 MAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKIS 449 (623)
Q Consensus 370 ~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~ 449 (623)
......++||||+++|+|.+++.. ...+++..+..++.|++.||.|||+. +|+||||||+||++++++.+||+
T Consensus 170 ~~~~~~~lv~e~~~g~~L~~~l~~----~~~l~~~~~~~i~~qi~~~L~~LH~~---gi~H~Dlkp~NIl~~~~~~ikl~ 242 (365)
T 2y7j_A 170 ESSSFMFLVFDLMRKGELFDYLTE----KVALSEKETRSIMRSLLEAVSFLHAN---NIVHRDLKPENILLDDNMQIRLS 242 (365)
T ss_dssp EBSSEEEEEECCCTTCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEEC
T ss_pred eeCCEEEEEEEeCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEEE
Confidence 999999999999999999999963 24689999999999999999999999 99999999999999999999999
Q ss_pred ecccccccCCCCCcccccccCCCCcccccCcccccC------CCCCcchhHHHHHHHHHHHHhCCCCCCCCCCccccccc
Q 006982 450 DFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYART------LVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGN 523 (623)
Q Consensus 450 Dfgla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~------~~~s~k~DV~sfGvil~elltg~~P~~~~~~~~~~~~~ 523 (623)
|||++..+..... .....||+.|+|||++.+ ..++.++|||||||++|||++|+.||...... .
T Consensus 243 DfG~~~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~-----~ 312 (365)
T 2y7j_A 243 DFGFSCHLEPGEK-----LRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQI-----L 312 (365)
T ss_dssp CCTTCEECCTTCC-----BCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHH-----H
T ss_pred ecCcccccCCCcc-----cccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCHH-----H
Confidence 9999987654322 123458999999998853 35789999999999999999999999653211 0
Q ss_pred HHHHHHHHhccCchhhhhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHH
Q 006982 524 LVEWIAQLSSTGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQ 581 (623)
Q Consensus 524 l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~ 581 (623)
....+...... ...+.+ ...+.+ +..++..|+. .||++|||+.|+++
T Consensus 313 ~~~~i~~~~~~-----~~~~~~--~~~~~~---~~~li~~~L~-~dP~~Rps~~ell~ 359 (365)
T 2y7j_A 313 MLRMIMEGQYQ-----FSSPEW--DDRSST---VKDLISRLLQ-VDPEARLTAEQALQ 359 (365)
T ss_dssp HHHHHHHTCCC-----CCHHHH--SSSCHH---HHHHHHHHSC-SSTTTSCCHHHHHH
T ss_pred HHHHHHhCCCC-----CCCccc--ccCCHH---HHHHHHHHcC-CChhHCcCHHHHhc
Confidence 11111110000 000000 112233 3344456666 99999999999986
No 171
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=100.00 E-value=1e-37 Score=323.75 Aligned_cols=199 Identities=26% Similarity=0.368 Sum_probs=168.9
Q ss_pred ccCcccceeeccCccEEEEEEeC-CCcEEEEEEeccccc---cHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEEe
Q 006982 305 NSFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQR---SEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYK 380 (623)
Q Consensus 305 ~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e 380 (623)
++|...+.||+|+||.||+|... +++.||+|++..... ..+.+.+|++++.+++||||+++++++.+.+..++|||
T Consensus 25 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 104 (331)
T 4aaa_A 25 EKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVFE 104 (331)
T ss_dssp GGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred hhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEEEe
Confidence 57888999999999999999975 589999999865432 24567899999999999999999999999999999999
Q ss_pred cCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCCC
Q 006982 381 HMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPI 460 (623)
Q Consensus 381 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~~ 460 (623)
|+++++|.+++.. ...+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 105 ~~~~~~l~~~~~~----~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 177 (331)
T 4aaa_A 105 FVDHTILDDLELF----PNGLDYQVVQKYLFQIINGIGFCHSH---NIIHRDIKPENILVSQSGVVKLCDFGFARTLAAP 177 (331)
T ss_dssp CCSEEHHHHHHHS----TTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCTTC------
T ss_pred cCCcchHHHHHhh----ccCCCHHHHHHHHHHHHHHHHHHHHC---CEEccCcChheEEEcCCCcEEEEeCCCceeecCC
Confidence 9999999988752 24589999999999999999999999 9999999999999999999999999999875432
Q ss_pred CCcccccccCCCCcccccCcccccCC-CCCcchhHHHHHHHHHHHHhCCCCCCCC
Q 006982 461 DTHLSTFVNGEFGDLGYVAPEYARTL-VATPKGDVYSFGTVLLELVTGERPTNVA 514 (623)
Q Consensus 461 ~~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~k~DV~sfGvil~elltg~~P~~~~ 514 (623)
... .....||+.|+|||++.+. .++.++||||||+++|||++|+.||...
T Consensus 178 ~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~ 228 (331)
T 4aaa_A 178 GEV----YDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGD 228 (331)
T ss_dssp ----------CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred ccc----cCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 211 2234589999999998765 7899999999999999999999999764
No 172
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=100.00 E-value=5.7e-38 Score=325.78 Aligned_cols=259 Identities=19% Similarity=0.253 Sum_probs=182.8
Q ss_pred ccCcccceeeccCccEEEEEEeC-CCcEEEEEEecccc-ccHHHHHHHHHHhCCCC-CCCCcceeEEEEe--------CC
Q 006982 305 NSFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQ-RSEKEFVAEMATLGSVK-NRNLVPLLGFCMA--------KK 373 (623)
Q Consensus 305 ~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~--------~~ 373 (623)
.+|...+.||+|+||.||+|... +++.||+|++.... ...+.+.+|+.++.++. ||||+++++++.. ..
T Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~~ 107 (337)
T 3ll6_A 28 LRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQA 107 (337)
T ss_dssp EEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTSSE
T ss_pred ceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhccccccccccccccCCc
Confidence 46888999999999999999964 78999999885543 34567889999999996 9999999999942 33
Q ss_pred eeeEEEecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCC--cEecCCCCCceeeCCCCCeEEeec
Q 006982 374 ERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPR--IIHRNISSKCILLDDDFEPKISDF 451 (623)
Q Consensus 374 ~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~--i~H~dlk~~NILl~~~~~~kl~Df 451 (623)
..++|+||++ |+|.+++.... ....+++..++.++.|++.||+|||+. + |+||||||+|||++.++.+||+||
T Consensus 108 ~~~lv~e~~~-g~L~~~l~~~~-~~~~~~~~~~~~i~~qi~~~l~~LH~~---~~~ivH~Dikp~NIl~~~~~~~kl~Df 182 (337)
T 3ll6_A 108 EFLLLTELCK-GQLVEFLKKME-SRGPLSCDTVLKIFYQTCRAVQHMHRQ---KPPIIHRDLKVENLLLSNQGTIKLCDF 182 (337)
T ss_dssp EEEEEEECCS-EEHHHHHHHHH-TTCSCCHHHHHHHHHHHHHHHHHHHTS---SSCCBCCCCCGGGCEECTTSCEEBCCC
T ss_pred eEEEEEEecC-CCHHHHHHHhh-ccCCCCHHHHHHHHHHHHHHHHHHHhC---CCCEEEccCCcccEEECCCCCEEEecC
Confidence 4689999996 79999885422 224699999999999999999999998 7 999999999999999999999999
Q ss_pred ccccccCCCCCccc--------ccccCCCCcccccCcccc---cCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCcccc
Q 006982 452 GLARLMNPIDTHLS--------TFVNGEFGDLGYVAPEYA---RTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETF 520 (623)
Q Consensus 452 gla~~~~~~~~~~~--------~~~~~~~gt~~y~aPE~~---~~~~~s~k~DV~sfGvil~elltg~~P~~~~~~~~~~ 520 (623)
|+++.......... .......||+.|+|||++ .+..++.++||||||+++|||++|+.||.......
T Consensus 183 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~-- 260 (337)
T 3ll6_A 183 GSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKLR-- 260 (337)
T ss_dssp TTCBCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC---------
T ss_pred ccceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhHHH--
Confidence 99987654221110 001123489999999998 56678999999999999999999999996432210
Q ss_pred cccHHHHHHHHhccCchhhhhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHhhccc
Q 006982 521 KGNLVEWIAQLSSTGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAIGERY 590 (623)
Q Consensus 521 ~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~L~~i~~~~ 590 (623)
........ . .......+ +..++..|+. .||++|||+.|+++.|+++....
T Consensus 261 ------~~~~~~~~-~---------~~~~~~~~---~~~li~~~l~-~~p~~Rps~~e~l~~l~~~~~~~ 310 (337)
T 3ll6_A 261 ------IVNGKYSI-P---------PHDTQYTV---FHSLIRAMLQ-VNPEERLSIAEVVHQLQEIAAAR 310 (337)
T ss_dssp -----------CCC-C---------TTCCSSGG---GHHHHHHHSC-SSGGGSCCHHHHHHHHHHHHHHT
T ss_pred ------hhcCcccC-C---------cccccchH---HHHHHHHHcc-CChhhCcCHHHHHHHHHHHHhcc
Confidence 00000000 0 00111122 3344556666 99999999999999999987654
No 173
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=100.00 E-value=8.3e-38 Score=325.69 Aligned_cols=252 Identities=20% Similarity=0.268 Sum_probs=192.5
Q ss_pred hccCcccceeeccCccEEEEEEeC-CCcEEEEEEeccccccHHHHHHHHHHhCCC-CCCCCcceeEEEEeCCeeeEEEec
Q 006982 304 TNSFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQRSEKEFVAEMATLGSV-KNRNLVPLLGFCMAKKERLLVYKH 381 (623)
Q Consensus 304 ~~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lV~e~ 381 (623)
.++|...+.||+|+||.||++..+ +++.||+|++...... ..+|++++.++ +||||+++++++.+.+..++||||
T Consensus 21 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~---~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~ 97 (342)
T 2qr7_A 21 TDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKRD---PTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTEL 97 (342)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTCC---CHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECC
T ss_pred cccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccCC---hHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEEEEeC
Confidence 457899999999999999999965 6889999999765432 34678887777 799999999999999999999999
Q ss_pred CCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCC----CCeEEeeccccccc
Q 006982 382 MPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDD----FEPKISDFGLARLM 457 (623)
Q Consensus 382 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~----~~~kl~Dfgla~~~ 457 (623)
+++|+|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+|||+.++ +.+||+|||+++..
T Consensus 98 ~~gg~L~~~i~~----~~~~~~~~~~~~~~qi~~al~~lH~~---givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~ 170 (342)
T 2qr7_A 98 MKGGELLDKILR----QKFFSEREASAVLFTITKTVEYLHAQ---GVVHRDLKPSNILYVDESGNPESIRICDFGFAKQL 170 (342)
T ss_dssp CCSCBHHHHHHT----CTTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESSSSCSGGGEEECCCTTCEEC
T ss_pred CCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CcEeccCCHHHEEEecCCCCcCeEEEEECCCcccC
Confidence 999999999863 34689999999999999999999999 99999999999998543 34999999999876
Q ss_pred CCCCCcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCcccccccHHHHHHHHhccCch
Q 006982 458 NPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQL 537 (623)
Q Consensus 458 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~ 537 (623)
...... .....||+.|+|||++.+..++.++|||||||++|||++|+.||...... ...+........ ..
T Consensus 171 ~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~-----~~~~~~~~i~~~-~~ 240 (342)
T 2qr7_A 171 RAENGL----LMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDD-----TPEEILARIGSG-KF 240 (342)
T ss_dssp BCTTCC----BCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTS-----CHHHHHHHHHHC-CC
T ss_pred cCCCCc----eeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcC-----CHHHHHHHHccC-Cc
Confidence 432221 22345899999999998888899999999999999999999999753211 111222211111 00
Q ss_pred hhhhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHH
Q 006982 538 QDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQF 582 (623)
Q Consensus 538 ~~~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~ 582 (623)
...... ....++++.+++ ..|+. .||++||++.|+++.
T Consensus 241 -~~~~~~--~~~~s~~~~~li---~~~L~-~dP~~R~t~~~il~h 278 (342)
T 2qr7_A 241 -SLSGGY--WNSVSDTAKDLV---SKMLH-VDPHQRLTAALVLRH 278 (342)
T ss_dssp -CCCSTT--TTTSCHHHHHHH---HHHTC-SSTTTSCCHHHHTTS
T ss_pred -ccCccc--cccCCHHHHHHH---HHHCC-CChhHCcCHHHHhcC
Confidence 000000 012344444444 45655 999999999998864
No 174
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=1.7e-37 Score=329.44 Aligned_cols=204 Identities=22% Similarity=0.330 Sum_probs=162.6
Q ss_pred HhccCcccceeeccCccEEEEEEe-CCCcEEEEEEecccc---ccHHHHHHHHHHhCCCC-CCCCcceeEEEEeCC--ee
Q 006982 303 ATNSFSKNNIIGSGRTGTMYKALL-EDGTSLMVKRLQDSQ---RSEKEFVAEMATLGSVK-NRNLVPLLGFCMAKK--ER 375 (623)
Q Consensus 303 ~~~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~--~~ 375 (623)
..++|...+.||+|+||.||+|.. .+++.||+|++.... .....+.+|+.++.++. ||||+++++++...+ ..
T Consensus 7 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~~ 86 (388)
T 3oz6_A 7 VLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRDV 86 (388)
T ss_dssp HHTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSCE
T ss_pred ccCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCEE
Confidence 346799999999999999999995 478999999986532 33456788999999997 999999999998654 67
Q ss_pred eEEEecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeeccccc
Q 006982 376 LLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLAR 455 (623)
Q Consensus 376 ~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~ 455 (623)
++||||++ |+|.+++.. ..+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++
T Consensus 87 ~lv~e~~~-~~L~~~~~~-----~~~~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~ 157 (388)
T 3oz6_A 87 YLVFDYME-TDLHAVIRA-----NILEPVHKQYVVYQLIKVIKYLHSG---GLLHRDMKPSNILLNAECHVKVADFGLSR 157 (388)
T ss_dssp EEEEECCS-EEHHHHHHH-----TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCE
T ss_pred EEEecccC-cCHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHeEEcCCCCEEecCCcccc
Confidence 99999998 599999853 4688999999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCCc-----------------ccccccCCCCcccccCcccccC-CCCCcchhHHHHHHHHHHHHhCCCCCCCCC
Q 006982 456 LMNPIDTH-----------------LSTFVNGEFGDLGYVAPEYART-LVATPKGDVYSFGTVLLELVTGERPTNVAK 515 (623)
Q Consensus 456 ~~~~~~~~-----------------~~~~~~~~~gt~~y~aPE~~~~-~~~s~k~DV~sfGvil~elltg~~P~~~~~ 515 (623)
........ .........||+.|+|||++.+ ..++.++||||+||++|||++|+.||....
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~ 235 (388)
T 3oz6_A 158 SFVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSS 235 (388)
T ss_dssp ESSSCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSS
T ss_pred cccccccccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCC
Confidence 75331110 0111223468999999999876 678999999999999999999999997643
No 175
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=100.00 E-value=1.7e-37 Score=325.87 Aligned_cols=198 Identities=23% Similarity=0.397 Sum_probs=173.3
Q ss_pred ccCcccceeeccCccEEEEEEeC-CCcEEEEEEecccc--ccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEEec
Q 006982 305 NSFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQ--RSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKH 381 (623)
Q Consensus 305 ~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 381 (623)
++|...+.||+|+||.||++... ++..||+|++.... ...+.+.+|++++.+++||||+++++++.+.+..++||||
T Consensus 33 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 112 (360)
T 3eqc_A 33 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEH 112 (360)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEEECC
T ss_pred ccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEEEEC
Confidence 56888999999999999999975 68999999987542 3356789999999999999999999999999999999999
Q ss_pred CCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCCCC
Q 006982 382 MPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPID 461 (623)
Q Consensus 382 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~~~ 461 (623)
+++|+|.+++... ..+++..+..++.+++.||+|||+.+ +|+||||||+||+++.++.+||+|||++......
T Consensus 113 ~~~~~L~~~l~~~----~~~~~~~~~~i~~~i~~~l~~lh~~~--~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~- 185 (360)
T 3eqc_A 113 MDGGSLDQVLKKA----GRIPEQILGKVSIAVIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS- 185 (360)
T ss_dssp CTTCBHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHHHHH--CCCCSCCSGGGEEECTTCCEEECCCCCCHHHHHH-
T ss_pred CCCCCHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHhC--CEEcCCccHHHEEECCCCCEEEEECCCCcccccc-
Confidence 9999999999632 45889999999999999999999842 7999999999999999999999999999754321
Q ss_pred CcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCC
Q 006982 462 THLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVA 514 (623)
Q Consensus 462 ~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~~ 514 (623)
......||+.|+|||++.+..++.++||||||+++|||++|+.||...
T Consensus 186 -----~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~ 233 (360)
T 3eqc_A 186 -----MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPP 233 (360)
T ss_dssp -----C----CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCC
T ss_pred -----cccCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence 112235899999999999999999999999999999999999999753
No 176
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=100.00 E-value=5.5e-37 Score=320.87 Aligned_cols=203 Identities=23% Similarity=0.321 Sum_probs=172.1
Q ss_pred ccCcccceeeccCccEEEEEEe-CCCcEEEEEEecccc---ccHHHHHHHHHHhCCCCCCCCcceeEEEEeC--------
Q 006982 305 NSFSKNNIIGSGRTGTMYKALL-EDGTSLMVKRLQDSQ---RSEKEFVAEMATLGSVKNRNLVPLLGFCMAK-------- 372 (623)
Q Consensus 305 ~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~-------- 372 (623)
++|...+.||+|+||.||+|.. .+++.||+|++.... .....+.+|++++.+++||||+++++++...
T Consensus 17 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 96 (351)
T 3mi9_A 17 SKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCK 96 (351)
T ss_dssp GGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC--------
T ss_pred cceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccCC
Confidence 5788899999999999999997 578999999986533 2345788999999999999999999999874
Q ss_pred CeeeEEEecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecc
Q 006982 373 KERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFG 452 (623)
Q Consensus 373 ~~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfg 452 (623)
+..++||||+++ +|.+.+... ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||
T Consensus 97 ~~~~lv~e~~~~-~l~~~l~~~---~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg 169 (351)
T 3mi9_A 97 GSIYLVFDFCEH-DLAGLLSNV---LVKFTLSEIKRVMQMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFG 169 (351)
T ss_dssp CEEEEEEECCSE-EHHHHHHCT---TSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCT
T ss_pred ceEEEEEeccCC-CHHHHHhhc---cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCHHHEEEcCCCCEEEccch
Confidence 457899999985 777777532 24589999999999999999999999 99999999999999999999999999
Q ss_pred cccccCCCCCcccccccCCCCcccccCcccccC-CCCCcchhHHHHHHHHHHHHhCCCCCCCC
Q 006982 453 LARLMNPIDTHLSTFVNGEFGDLGYVAPEYART-LVATPKGDVYSFGTVLLELVTGERPTNVA 514 (623)
Q Consensus 453 la~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~k~DV~sfGvil~elltg~~P~~~~ 514 (623)
+++.................||+.|+|||++.+ ..++.++|||||||++|||++|+.||...
T Consensus 170 ~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~ 232 (351)
T 3mi9_A 170 LARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGN 232 (351)
T ss_dssp TCEECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred hcccccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCC
Confidence 998765433322233344568999999998876 45799999999999999999999999753
No 177
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=100.00 E-value=3.8e-37 Score=313.82 Aligned_cols=248 Identities=21% Similarity=0.307 Sum_probs=198.1
Q ss_pred hccCcccceeeccCccEEEEEEeC-CCcEEEEEEecccc----ccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEE
Q 006982 304 TNSFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQ----RSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLV 378 (623)
Q Consensus 304 ~~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV 378 (623)
.++|...+.||+|+||.||++... +++.+|+|++.... ...+.+.+|+.++++++||||+++++++.+.+..++|
T Consensus 14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv 93 (294)
T 2rku_A 14 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVV 93 (294)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEEE
Confidence 357888999999999999999976 57889999986542 3356788999999999999999999999999999999
Q ss_pred EecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccC
Q 006982 379 YKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMN 458 (623)
Q Consensus 379 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~ 458 (623)
|||+++++|.+++.. ...+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 94 ~e~~~~~~L~~~~~~----~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~ 166 (294)
T 2rku_A 94 LELCRRRSLLELHKR----RKALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVE 166 (294)
T ss_dssp EECCTTCBHHHHHHH----HCSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred EecCCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEcCCCCEEEEeccCceecc
Confidence 999999999999853 24689999999999999999999999 99999999999999999999999999998765
Q ss_pred CCCCcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCcccccccHHHHHHHHhccCchh
Q 006982 459 PIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQ 538 (623)
Q Consensus 459 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 538 (623)
..... .....||+.|+|||.+.+..++.++||||||+++|||++|+.||..... .+......... .
T Consensus 167 ~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~--------~~~~~~~~~~~-~- 232 (294)
T 2rku_A 167 YDGER----KKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCL--------KETYLRIKKNE-Y- 232 (294)
T ss_dssp STTCC----BCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSH--------HHHHHHHHTTC-C-
T ss_pred cCccc----cccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH--------HHHHHHHhhcc-C-
Confidence 32221 1223489999999999988899999999999999999999999975321 11111111100 0
Q ss_pred hhhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHH
Q 006982 539 DAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQF 582 (623)
Q Consensus 539 ~~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~ 582 (623)
.+ ....++++. .++..|+. .||++|||++|+++.
T Consensus 233 -----~~-~~~~~~~~~---~li~~~l~-~~p~~Rps~~~ll~~ 266 (294)
T 2rku_A 233 -----SI-PKHINPVAA---SLIQKMLQ-TDPTARPTINELLND 266 (294)
T ss_dssp -----CC-CTTSCHHHH---HHHHHHTC-SSGGGSCCGGGGGGS
T ss_pred -----CC-ccccCHHHH---HHHHHHcc-cChhhCcCHHHHhhC
Confidence 00 111233333 44456666 999999999999874
No 178
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=100.00 E-value=1.7e-37 Score=321.55 Aligned_cols=256 Identities=20% Similarity=0.270 Sum_probs=195.5
Q ss_pred HHHhccCccc-ceeeccCccEEEEEEeC-CCcEEEEEEecccc---ccHHHHHHHHHHhCCC-CCCCCcceeEEEEeCCe
Q 006982 301 MKATNSFSKN-NIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQ---RSEKEFVAEMATLGSV-KNRNLVPLLGFCMAKKE 374 (623)
Q Consensus 301 ~~~~~~f~~~-~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~ 374 (623)
....+.|... +.||+|+||.||+|... +++.||+|++.... .....+.+|+.++.++ .||||+++++++.+...
T Consensus 24 ~~~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~~~~~ 103 (327)
T 3lm5_A 24 ENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYENTSE 103 (327)
T ss_dssp HHHHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSE
T ss_pred HhhhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEEEeCCe
Confidence 3445566666 88999999999999965 68999999987532 3467889999999998 46999999999999999
Q ss_pred eeEEEecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCC---CCCeEEeec
Q 006982 375 RLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDD---DFEPKISDF 451 (623)
Q Consensus 375 ~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~---~~~~kl~Df 451 (623)
.++||||+++|+|.+++.... ...+++..++.++.|++.||+|||+. +|+||||||+||+++. ++.+||+||
T Consensus 104 ~~lv~e~~~~~~L~~~~~~~~--~~~~~~~~~~~i~~ql~~~L~~LH~~---givH~Dikp~NIl~~~~~~~~~~kL~Df 178 (327)
T 3lm5_A 104 IILILEYAAGGEIFSLCLPEL--AEMVSENDVIRLIKQILEGVYYLHQN---NIVHLDLKPQNILLSSIYPLGDIKIVDF 178 (327)
T ss_dssp EEEEEECCTTEEGGGGGSSCC---CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESCBTTBCCEEECCG
T ss_pred EEEEEEecCCCcHHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHHC---CeecCcCChHHEEEecCCCCCcEEEeeC
Confidence 999999999999999986432 35689999999999999999999999 9999999999999998 789999999
Q ss_pred ccccccCCCCCcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCcccccccHHHHHHHH
Q 006982 452 GLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQL 531 (623)
Q Consensus 452 gla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~~~~~~~~~~~l~~~~~~~ 531 (623)
|+++....... .....||+.|+|||++.+..++.++||||||+++|||++|+.||......+ ....+...
T Consensus 179 g~a~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~-----~~~~i~~~ 248 (327)
T 3lm5_A 179 GMSRKIGHACE-----LREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQE-----TYLNISQV 248 (327)
T ss_dssp GGCEEC--------------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH-----HHHHHHHT
T ss_pred ccccccCCccc-----cccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchH-----HHHHHHhc
Confidence 99987653221 122358999999999999999999999999999999999999996532211 00001110
Q ss_pred hccCchhhhhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHH
Q 006982 532 SSTGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQF 582 (623)
Q Consensus 532 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~ 582 (623)
... ... .. .....+++. .++..|+. .||++|||++|+++.
T Consensus 249 ~~~-~~~----~~--~~~~~~~~~---~li~~~L~-~dP~~Rpt~~~ll~h 288 (327)
T 3lm5_A 249 NVD-YSE----ET--FSSVSQLAT---DFIQSLLV-KNPEKRPTAEICLSH 288 (327)
T ss_dssp CCC-CCT----TT--TTTSCHHHH---HHHHHHSC-SSGGGSCCHHHHTTC
T ss_pred ccc-cCc----hh--hcccCHHHH---HHHHHHcC-CChhhCcCHHHHhCC
Confidence 000 000 00 011233333 44456666 999999999998753
No 179
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=100.00 E-value=2.2e-38 Score=334.83 Aligned_cols=248 Identities=17% Similarity=0.186 Sum_probs=188.6
Q ss_pred hccCcccceeeccCccEEEEEEe-CCCcEEEEEEeccc----cccHHHHHHHH---HHhCCCCCCCCccee-------EE
Q 006982 304 TNSFSKNNIIGSGRTGTMYKALL-EDGTSLMVKRLQDS----QRSEKEFVAEM---ATLGSVKNRNLVPLL-------GF 368 (623)
Q Consensus 304 ~~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~----~~~~~~~~~e~---~~l~~l~h~niv~l~-------~~ 368 (623)
.++|...+.||+|+||.||+|.. .+|+.||+|++... ....+.+.+|+ +.+++++|||||+++ ++
T Consensus 72 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~ 151 (377)
T 3byv_A 72 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL 151 (377)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEE
T ss_pred CceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhh
Confidence 45788889999999999999995 56999999999642 23457788999 667777999999998 66
Q ss_pred EEeCCe-----------------eeEEEecCCCCCHhhhccCCC---CCCCccChHHHHHHHHHHHHHHHHHHhcCCCCc
Q 006982 369 CMAKKE-----------------RLLVYKHMPNGSLYDLLHPAD---DTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRI 428 (623)
Q Consensus 369 ~~~~~~-----------------~~lV~e~~~~gsL~~~l~~~~---~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i 428 (623)
+.+.+. .++||||+ +|+|.+++.... .....++|..++.++.|++.||+|||+. +|
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~i 227 (377)
T 3byv_A 152 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY---GL 227 (377)
T ss_dssp EECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHT---TE
T ss_pred hhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhC---Ce
Confidence 665532 78999999 689999996421 1123455788999999999999999999 99
Q ss_pred EecCCCCCceeeCCCCCeEEeecccccccCCCCCcccccccCCCCcccccCcccccCC-----------CCCcchhHHHH
Q 006982 429 IHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTL-----------VATPKGDVYSF 497 (623)
Q Consensus 429 ~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----------~~s~k~DV~sf 497 (623)
+||||||+|||++.++.+||+|||+++.... ......| +.|+|||++.+. .++.++|||||
T Consensus 228 vHrDikp~NIll~~~~~~kL~DFG~a~~~~~-------~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSl 299 (377)
T 3byv_A 228 VHTYLRPVDIVLDQRGGVFLTGFEHLVRDGA-------RVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWAL 299 (377)
T ss_dssp ECSCCCGGGEEECTTCCEEECCGGGCEETTC-------EEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHH
T ss_pred ecCCCCHHHEEEcCCCCEEEEechhheecCC-------cccCCCC-cCccChhhhcccccccccccccccCChhhhHHHH
Confidence 9999999999999999999999999986432 1123346 899999999877 89999999999
Q ss_pred HHHHHHHHhCCCCCCCCCCcccccccHHHHHHHHhccCchhhhhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHH
Q 006982 498 GTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMF 577 (623)
Q Consensus 498 Gvil~elltg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ 577 (623)
||++|||++|+.||......... ..+... ....++++.+ ++..|+. .||++|||+.
T Consensus 300 G~il~elltg~~Pf~~~~~~~~~-----------------~~~~~~---~~~~~~~~~~---li~~~L~-~dp~~Rpt~~ 355 (377)
T 3byv_A 300 GLVIYWIWCADLPITKDAALGGS-----------------EWIFRS---CKNIPQPVRA---LLEGFLR-YPKEDRLLPL 355 (377)
T ss_dssp HHHHHHHHHSSCCC------CCS-----------------GGGGSS---CCCCCHHHHH---HHHHHTC-SSGGGCCCHH
T ss_pred HHHHHHHHHCCCCCcccccccch-----------------hhhhhh---ccCCCHHHHH---HHHHHcC-CCchhCCCHH
Confidence 99999999999999754322111 111110 0123344444 4456766 9999999999
Q ss_pred HHHH--HHHHhh
Q 006982 578 EVYQ--FLRAIG 587 (623)
Q Consensus 578 ev~~--~L~~i~ 587 (623)
|+++ .++++.
T Consensus 356 e~l~hp~f~~~~ 367 (377)
T 3byv_A 356 QAMETPEYEQLR 367 (377)
T ss_dssp HHHTSHHHHHHH
T ss_pred HHhhChHHHHHH
Confidence 9986 445443
No 180
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=100.00 E-value=2.9e-37 Score=314.49 Aligned_cols=251 Identities=21% Similarity=0.307 Sum_probs=191.0
Q ss_pred cCcccceeeccCccEEEEEEe-CCCcEEEEEEecccc-ccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEEecCC
Q 006982 306 SFSKNNIIGSGRTGTMYKALL-EDGTSLMVKRLQDSQ-RSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKHMP 383 (623)
Q Consensus 306 ~f~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~ 383 (623)
+|....+||+|+||.||+|.. .++..||+|.+.... ...+.+.+|+.++.+++||||+++++++...+..++|+||++
T Consensus 23 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 102 (295)
T 2clq_A 23 ENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVP 102 (295)
T ss_dssp TTSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCS
T ss_pred CCCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEEeCC
Confidence 355566999999999999995 468899999986543 345678999999999999999999999999999999999999
Q ss_pred CCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCC-CCCeEEeecccccccCCCCC
Q 006982 384 NGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDD-DFEPKISDFGLARLMNPIDT 462 (623)
Q Consensus 384 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~-~~~~kl~Dfgla~~~~~~~~ 462 (623)
+++|.+++.... ....+++..+..++.|++.||.|||+. +|+||||||+||+++. ++.+||+|||+++.......
T Consensus 103 ~~~L~~~l~~~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~~~ 178 (295)
T 2clq_A 103 GGSLSALLRSKW-GPLKDNEQTIGFYTKQILEGLKYLHDN---QIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINP 178 (295)
T ss_dssp EEEHHHHHHHTT-CCCTTCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTCCEEECCTTTCEESCC---
T ss_pred CCCHHHHHHhhc-cCCCccHHHHHHHHHHHHHHHHHHHhC---CEEccCCChhhEEEECCCCCEEEeecccccccCCCCC
Confidence 999999996543 224567889999999999999999999 9999999999999987 89999999999987643221
Q ss_pred cccccccCCCCcccccCcccccCCC--CCcchhHHHHHHHHHHHHhCCCCCCCCCCcccccccHHHHHHHHhccCchhhh
Q 006982 463 HLSTFVNGEFGDLGYVAPEYARTLV--ATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDA 540 (623)
Q Consensus 463 ~~~~~~~~~~gt~~y~aPE~~~~~~--~s~k~DV~sfGvil~elltg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 540 (623)
. .....||+.|+|||++.+.. ++.++||||||+++|||++|+.||...... ...........
T Consensus 179 ~----~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~------~~~~~~~~~~~------ 242 (295)
T 2clq_A 179 C----TETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEP------QAAMFKVGMFK------ 242 (295)
T ss_dssp ------CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSH------HHHHHHHHHHC------
T ss_pred c----ccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCch------hHHHHhhcccc------
Confidence 1 12335899999999987643 789999999999999999999999642211 00111100000
Q ss_pred hchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHH
Q 006982 541 IDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQ 581 (623)
Q Consensus 541 ~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~ 581 (623)
..+.+ ....++++. .++..|+. .||++||++.|+++
T Consensus 243 ~~~~~-~~~~~~~~~---~li~~~l~-~dp~~Rps~~~ll~ 278 (295)
T 2clq_A 243 VHPEI-PESMSAEAK---AFILKCFE-PDPDKRACANDLLV 278 (295)
T ss_dssp CCCCC-CTTSCHHHH---HHHHHTTC-SSTTTSCCHHHHHT
T ss_pred ccccc-cccCCHHHH---HHHHHHcc-CChhhCCCHHHHhc
Confidence 00001 111233333 44456776 99999999999875
No 181
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=100.00 E-value=2.3e-37 Score=320.12 Aligned_cols=199 Identities=22% Similarity=0.351 Sum_probs=165.2
Q ss_pred ccCcccceeeccCccEEEEEEeC-CCcEEEEEEeccccccH--HHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEEec
Q 006982 305 NSFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQRSE--KEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKH 381 (623)
Q Consensus 305 ~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~--~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 381 (623)
++|...+.||+|+||.||+|... +++.||+|++....... ..+.+|++++.+++||||+++++++.+.+..++||||
T Consensus 2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (324)
T 3mtl_A 2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEY 81 (324)
T ss_dssp CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEecc
Confidence 46888999999999999999975 78999999986543221 2455799999999999999999999999999999999
Q ss_pred CCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCCCC
Q 006982 382 MPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPID 461 (623)
Q Consensus 382 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~~~ 461 (623)
++ |+|.+++... +..+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||+++......
T Consensus 82 ~~-~~l~~~~~~~---~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~ 154 (324)
T 3mtl_A 82 LD-KDLKQYLDDC---GNIINMHNVKLFLFQLLRGLAYCHRQ---KVLHRDLKPQNLLINERGELKLADFGLARAKSIPT 154 (324)
T ss_dssp CS-EEHHHHHHHT---TTCCCHHHHHHHHHHHHHHHHHHHHT---TEEESSCCGGGEEECTTCCEEECSSSEEECC----
T ss_pred cc-cCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCcCHHHEEECCCCCEEEccCcccccccCCc
Confidence 97 5999988643 34689999999999999999999999 99999999999999999999999999998654322
Q ss_pred CcccccccCCCCcccccCcccccC-CCCCcchhHHHHHHHHHHHHhCCCCCCCC
Q 006982 462 THLSTFVNGEFGDLGYVAPEYART-LVATPKGDVYSFGTVLLELVTGERPTNVA 514 (623)
Q Consensus 462 ~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~k~DV~sfGvil~elltg~~P~~~~ 514 (623)
.. .....||+.|+|||++.+ ..++.++|||||||++|||++|+.||...
T Consensus 155 ~~----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~ 204 (324)
T 3mtl_A 155 KT----YDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGS 204 (324)
T ss_dssp ------------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred cc----cccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 11 223357999999999876 56899999999999999999999999764
No 182
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=100.00 E-value=6.7e-37 Score=317.22 Aligned_cols=193 Identities=18% Similarity=0.332 Sum_probs=169.3
Q ss_pred ccCcccceeeccCccEEEEEEe-CCCcEEEEEEeccccccHHHHHHHHHHhCCCC-CCCCcceeEEEEe--CCeeeEEEe
Q 006982 305 NSFSKNNIIGSGRTGTMYKALL-EDGTSLMVKRLQDSQRSEKEFVAEMATLGSVK-NRNLVPLLGFCMA--KKERLLVYK 380 (623)
Q Consensus 305 ~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~--~~~~~lV~e 380 (623)
++|...+.||+|+||.||+|.. .+++.||+|++... ..+.+.+|++++.+++ ||||+++++++.+ ....++|||
T Consensus 36 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~lv~e 113 (330)
T 3nsz_A 36 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPV--KKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFE 113 (330)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC--CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEEEEE
T ss_pred CceEEEEEecccCCeEEEEEEECCCCcEEEEEEeccc--chHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEEEEe
Confidence 5788899999999999999985 57899999998743 3567899999999997 9999999999988 556789999
Q ss_pred cCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCC-CeEEeecccccccCC
Q 006982 381 HMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDF-EPKISDFGLARLMNP 459 (623)
Q Consensus 381 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~-~~kl~Dfgla~~~~~ 459 (623)
|+++++|.+++. .+++..+..++.|++.||+|||+. +|+||||||+|||++.++ .+||+|||+++....
T Consensus 114 ~~~~~~l~~~~~-------~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~ 183 (330)
T 3nsz_A 114 HVNNTDFKQLYQ-------TLTDYDIRFYMYEILKALDYCHSM---GIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHP 183 (330)
T ss_dssp CCCCCCHHHHGG-------GCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTTEEEECCCTTCEECCT
T ss_pred ccCchhHHHHHH-------hCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEEcCCCCEEEEEeCCCceEcCC
Confidence 999999999983 488899999999999999999999 999999999999999776 899999999987654
Q ss_pred CCCcccccccCCCCcccccCcccccC-CCCCcchhHHHHHHHHHHHHhCCCCCCCC
Q 006982 460 IDTHLSTFVNGEFGDLGYVAPEYART-LVATPKGDVYSFGTVLLELVTGERPTNVA 514 (623)
Q Consensus 460 ~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~k~DV~sfGvil~elltg~~P~~~~ 514 (623)
... .....+|..|+|||.+.+ ..++.++|||||||++|||++|+.||...
T Consensus 184 ~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~ 234 (330)
T 3nsz_A 184 GQE-----YNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHG 234 (330)
T ss_dssp TCC-----CCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCC
T ss_pred CCc-----cccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccC
Confidence 322 123358899999999877 67899999999999999999999999643
No 183
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=100.00 E-value=7.4e-37 Score=331.42 Aligned_cols=197 Identities=23% Similarity=0.308 Sum_probs=165.0
Q ss_pred hccCcccceeeccCccEEEEEEeC-CCcEEEEEEecccc---ccHHHHHHHHHHhCCCCCCCCcceeEEEEeC------C
Q 006982 304 TNSFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQ---RSEKEFVAEMATLGSVKNRNLVPLLGFCMAK------K 373 (623)
Q Consensus 304 ~~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~------~ 373 (623)
.++|...+.||+|+||.||+|... +++.||+|++.... ...+.+.+|+++++.++||||+++++++... .
T Consensus 61 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~ 140 (464)
T 3ttj_A 61 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQ 140 (464)
T ss_dssp ETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCC
T ss_pred cCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCC
Confidence 357888999999999999999854 68899999997542 3356788999999999999999999999654 3
Q ss_pred eeeEEEecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeeccc
Q 006982 374 ERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGL 453 (623)
Q Consensus 374 ~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgl 453 (623)
..++||||+++ +|.+.+. ..+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+
T Consensus 141 ~~~lv~E~~~~-~l~~~~~------~~l~~~~~~~~~~qil~aL~~lH~~---~iiHrDlkp~NIll~~~~~~kl~DFG~ 210 (464)
T 3ttj_A 141 DVYLVMELMDA-NLCQVIQ------MELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGL 210 (464)
T ss_dssp EEEEEEECCSE-EHHHHHT------SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCCC
T ss_pred eEEEEEeCCCC-CHHHHHh------hcCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChHhEEEeCCCCEEEEEEEe
Confidence 56999999976 5666663 2488999999999999999999999 999999999999999999999999999
Q ss_pred ccccCCCCCcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCC
Q 006982 454 ARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAK 515 (623)
Q Consensus 454 a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~~~ 515 (623)
++...... ......||+.|+|||++.+..++.++||||+||++|||++|+.||.+..
T Consensus 211 a~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~ 267 (464)
T 3ttj_A 211 ARTAGTSF-----MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRD 267 (464)
T ss_dssp C-----CC-----CC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred eeecCCCc-----ccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence 98764321 1223458999999999999999999999999999999999999997643
No 184
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=4.3e-37 Score=321.16 Aligned_cols=202 Identities=22% Similarity=0.315 Sum_probs=167.1
Q ss_pred HHhccCcccceeeccCccEEEEEEeC-CCcEEEEEEecccccc------HHHHHHHHHHhCCCCCCCCcceeEEEEeCCe
Q 006982 302 KATNSFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQRS------EKEFVAEMATLGSVKNRNLVPLLGFCMAKKE 374 (623)
Q Consensus 302 ~~~~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~------~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~ 374 (623)
...++|...+.||+|+||.||+|... +++.||+|++...... ...+.+|++++.+++||||+++++++.+...
T Consensus 7 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 86 (346)
T 1ua2_A 7 SRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSN 86 (346)
T ss_dssp ------CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTC
T ss_pred HHhcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCCc
Confidence 34567999999999999999999965 6899999999653211 2467899999999999999999999999999
Q ss_pred eeEEEecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccc
Q 006982 375 RLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLA 454 (623)
Q Consensus 375 ~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla 454 (623)
.++||||+++ +|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 87 ~~lv~e~~~~-~l~~~~~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a 159 (346)
T 1ua2_A 87 ISLVFDFMET-DLEVIIKDN---SLVLTPSHIKAYMLMTLQGLEYLHQH---WILHRDLKPNNLLLDENGVLKLADFGLA 159 (346)
T ss_dssp CEEEEECCSE-EHHHHHTTC---CSSCCSSHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECCCGGG
T ss_pred eEEEEEcCCC-CHHHHHHhc---CcCCCHHHHHHHHHHHHHHHHHHHHC---CEECCCCCHHHEEEcCCCCEEEEecccc
Confidence 9999999986 899888642 35688999999999999999999999 9999999999999999999999999999
Q ss_pred cccCCCCCcccccccCCCCcccccCcccccCC-CCCcchhHHHHHHHHHHHHhCCCCCCCC
Q 006982 455 RLMNPIDTHLSTFVNGEFGDLGYVAPEYARTL-VATPKGDVYSFGTVLLELVTGERPTNVA 514 (623)
Q Consensus 455 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~k~DV~sfGvil~elltg~~P~~~~ 514 (623)
+........ .....||+.|+|||++.+. .++.++|||||||++|||++|..||...
T Consensus 160 ~~~~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~ 216 (346)
T 1ua2_A 160 KSFGSPNRA----YTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGD 216 (346)
T ss_dssp STTTSCCCC----CCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred eeccCCccc----CCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCC
Confidence 876432221 1234589999999998654 5789999999999999999999998754
No 185
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=100.00 E-value=3.7e-37 Score=317.12 Aligned_cols=262 Identities=18% Similarity=0.259 Sum_probs=190.3
Q ss_pred ccCcc-cceeeccCccEEEEEEe-CCCcEEEEEEecccc-ccHHHHHHHHHHhCCC-CCCCCcceeEEEEeCCeeeEEEe
Q 006982 305 NSFSK-NNIIGSGRTGTMYKALL-EDGTSLMVKRLQDSQ-RSEKEFVAEMATLGSV-KNRNLVPLLGFCMAKKERLLVYK 380 (623)
Q Consensus 305 ~~f~~-~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lV~e 380 (623)
+.|.+ .+.||+|+||.||+|.. .+++.||+|++.... .....+.+|++++.++ +||||+++++++.+.+..++|||
T Consensus 12 ~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e 91 (316)
T 2ac3_A 12 DVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFE 91 (316)
T ss_dssp TSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred eeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEEE
Confidence 45666 37899999999999995 478999999996543 4467889999999885 79999999999999999999999
Q ss_pred cCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCC---eEEeeccccccc
Q 006982 381 HMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFE---PKISDFGLARLM 457 (623)
Q Consensus 381 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~---~kl~Dfgla~~~ 457 (623)
|+++|+|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++. +||+|||++...
T Consensus 92 ~~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~ 164 (316)
T 2ac3_A 92 KMRGGSILSHIHK----RRHFNELEASVVVQDVASALDFLHNK---GIAHRDLKPENILCEHPNQVSPVKICDFDLGSGI 164 (316)
T ss_dssp CCTTCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEESCSSSSCSEEECCTTCCC--
T ss_pred cCCCCcHHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHHhC---CceeCCCCHHHEEEccCCCcCceEEEEccCcccc
Confidence 9999999999963 24689999999999999999999999 9999999999999998776 999999999865
Q ss_pred CCCCCc---ccccccCCCCcccccCcccccC-----CCCCcchhHHHHHHHHHHHHhCCCCCCCCCCccccccc------
Q 006982 458 NPIDTH---LSTFVNGEFGDLGYVAPEYART-----LVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGN------ 523 (623)
Q Consensus 458 ~~~~~~---~~~~~~~~~gt~~y~aPE~~~~-----~~~s~k~DV~sfGvil~elltg~~P~~~~~~~~~~~~~------ 523 (623)
...... .........||+.|+|||++.. ..++.++|||||||++|||++|+.||......+.....
T Consensus 165 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~ 244 (316)
T 2ac3_A 165 KLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPA 244 (316)
T ss_dssp -----------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC----CCHH
T ss_pred ccCCccccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcccccccccccccccchh
Confidence 422111 0111223458999999999875 55789999999999999999999999765432211000
Q ss_pred -HHHHHHHHhccCchhhhhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHH
Q 006982 524 -LVEWIAQLSSTGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQ 581 (623)
Q Consensus 524 -l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~ 581 (623)
........... .. ...... ....+.+ +..++..|+. .||++|||++|+++
T Consensus 245 ~~~~~~~~i~~~-~~-~~~~~~--~~~~~~~---~~~li~~~L~-~dP~~Rps~~e~l~ 295 (316)
T 2ac3_A 245 CQNMLFESIQEG-KY-EFPDKD--WAHISCA---AKDLISKLLV-RDAKQRLSAAQVLQ 295 (316)
T ss_dssp HHHHHHHHHHHC-CC-CCCHHH--HTTSCHH---HHHHHHHHSC-SSTTTSCCHHHHHH
T ss_pred HHHHHHHHHhcc-Cc-ccCchh--cccCCHH---HHHHHHHHhh-CChhhCCCHHHHhc
Confidence 00001111000 00 000000 0112233 3445556766 99999999999976
No 186
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=100.00 E-value=4.2e-37 Score=319.75 Aligned_cols=248 Identities=21% Similarity=0.304 Sum_probs=198.2
Q ss_pred hccCcccceeeccCccEEEEEEeC-CCcEEEEEEecccc----ccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEE
Q 006982 304 TNSFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQ----RSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLV 378 (623)
Q Consensus 304 ~~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV 378 (623)
.++|...+.||+|+||.||++... +++.+++|++.... ...+.+.+|+.++.+++||||+++++++.+.+..++|
T Consensus 40 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 119 (335)
T 2owb_A 40 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVV 119 (335)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred CCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEE
Confidence 357888999999999999999975 57889999986542 3356788999999999999999999999999999999
Q ss_pred EecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccC
Q 006982 379 YKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMN 458 (623)
Q Consensus 379 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~ 458 (623)
|||+++++|.+++.. ...+++..++.++.|++.||.|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 120 ~e~~~~~~L~~~~~~----~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~ 192 (335)
T 2owb_A 120 LELCRRRSLLELHKR----RKALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVE 192 (335)
T ss_dssp ECCCTTCBHHHHHHH----HCSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred EecCCCCCHHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHHHC---CCEecCCCchhEEEcCCCCEEEeeccCceecc
Confidence 999999999999853 24689999999999999999999999 99999999999999999999999999998765
Q ss_pred CCCCcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCcccccccHHHHHHHHhccCchh
Q 006982 459 PIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQ 538 (623)
Q Consensus 459 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 538 (623)
..... .....||+.|+|||++.+..++.++||||||+++|||++|+.||..... .+..........
T Consensus 193 ~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~--------~~~~~~~~~~~~-- 258 (335)
T 2owb_A 193 YDGER----KKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCL--------KETYLRIKKNEY-- 258 (335)
T ss_dssp STTCC----BCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSH--------HHHHHHHHHTCC--
T ss_pred cCccc----ccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCCH--------HHHHHHHhcCCC--
Confidence 32221 1223489999999999988899999999999999999999999965321 111111111000
Q ss_pred hhhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHH
Q 006982 539 DAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQF 582 (623)
Q Consensus 539 ~~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~ 582 (623)
.+ ......++. .++..|+. .||++|||+.|+++.
T Consensus 259 -----~~-~~~~~~~~~---~li~~~l~-~dp~~Rps~~ell~~ 292 (335)
T 2owb_A 259 -----SI-PKHINPVAA---SLIQKMLQ-TDPTARPTINELLND 292 (335)
T ss_dssp -----CC-CTTSCHHHH---HHHHHHTC-SSGGGSCCGGGGGGS
T ss_pred -----CC-CccCCHHHH---HHHHHHcc-CChhHCcCHHHHhcC
Confidence 00 111233333 34456666 999999999999874
No 187
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=100.00 E-value=5.5e-37 Score=325.95 Aligned_cols=265 Identities=19% Similarity=0.238 Sum_probs=198.6
Q ss_pred hccCcccceeeccCccEEEEEEe-CCCcEEEEEEeccccccHHHHHHHHHHhCCCC--------CCCCcceeEEEE----
Q 006982 304 TNSFSKNNIIGSGRTGTMYKALL-EDGTSLMVKRLQDSQRSEKEFVAEMATLGSVK--------NRNLVPLLGFCM---- 370 (623)
Q Consensus 304 ~~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~--------h~niv~l~~~~~---- 370 (623)
.++|...+.||+|+||.||+|.. .+++.||+|++.......+.+.+|++++.+++ |+||+++++++.
T Consensus 36 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~~ 115 (397)
T 1wak_A 36 NGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAEHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISGV 115 (397)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEET
T ss_pred CCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecCCcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeecCC
Confidence 36789999999999999999985 46889999999876666678889999998886 788999999987
Q ss_pred eCCeeeEEEecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCC------
Q 006982 371 AKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDF------ 444 (623)
Q Consensus 371 ~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~------ 444 (623)
+....++||||+ +|+|.+.+.... ...+++..++.++.|++.||+|||+++ +|+||||||+|||++.++
T Consensus 116 ~~~~~~lv~e~~-~~~l~~~~~~~~--~~~~~~~~~~~i~~qi~~aL~~lH~~~--givHrDikp~NIll~~~~~~~~~~ 190 (397)
T 1wak_A 116 NGTHICMVFEVL-GHHLLKWIIKSN--YQGLPLPCVKKIIQQVLQGLDYLHTKC--RIIHTDIKPENILLSVNEQYIRRL 190 (397)
T ss_dssp TEEEEEEEECCC-CCBHHHHHHHTT--TSCCCHHHHHHHHHHHHHHHHHHHHTT--CEECCCCSGGGEEECCCHHHHHHH
T ss_pred CCceEEEEEecc-CccHHHHHHhcc--cCCCCHHHHHHHHHHHHHHHHHHHHhC--CEecCCCCHHHeeEeccchhhhhh
Confidence 455789999999 556666664322 256899999999999999999999964 799999999999999775
Q ss_pred -------------------------------------------CeEEeecccccccCCCCCcccccccCCCCcccccCcc
Q 006982 445 -------------------------------------------EPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPE 481 (623)
Q Consensus 445 -------------------------------------------~~kl~Dfgla~~~~~~~~~~~~~~~~~~gt~~y~aPE 481 (623)
.+||+|||+++..... .....||+.|+|||
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~-------~~~~~gt~~y~aPE 263 (397)
T 1wak_A 191 AAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKH-------FTEDIQTRQYRSLE 263 (397)
T ss_dssp HHHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBC-------SCSCCSCGGGCCHH
T ss_pred hhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEecccccccccccc-------CccCCCCCcccCCh
Confidence 7999999999876432 12235899999999
Q ss_pred cccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCcccccc-cHHHHHHHHhccCc---------hhhhhc---------
Q 006982 482 YARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKG-NLVEWIAQLSSTGQ---------LQDAID--------- 542 (623)
Q Consensus 482 ~~~~~~~s~k~DV~sfGvil~elltg~~P~~~~~~~~~~~~-~l~~~~~~~~~~~~---------~~~~~d--------- 542 (623)
++.+..++.++|||||||++|||++|+.||......+.... .....+........ ..+.+.
T Consensus 264 ~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 343 (397)
T 1wak_A 264 VLIGSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHIT 343 (397)
T ss_dssp HHHTSCCCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSSBSSCC
T ss_pred hhcCCCCCcHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhcccccccccCCcccccccc
Confidence 99999999999999999999999999999976543321110 01111111110000 000000
Q ss_pred ---------hhhh-cCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHH
Q 006982 543 ---------KCLV-AKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQ 581 (623)
Q Consensus 543 ---------~~l~-~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~ 581 (623)
.... .....+....+..++..|+. .||++|||++|+++
T Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~-~dP~~Rpt~~e~l~ 391 (397)
T 1wak_A 344 KLKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLE-LIPEKRATAAECLR 391 (397)
T ss_dssp CCCCCCHHHHHHHTSCCCHHHHHHHHHHHGGGGC-SSGGGSCCHHHHHT
T ss_pred ccCCcchhHhhhhhcccchhhHHHHHHHHHHHhc-cChhhcCCHHHHhh
Confidence 0000 01123444566777778887 99999999999985
No 188
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=100.00 E-value=5e-38 Score=325.13 Aligned_cols=257 Identities=23% Similarity=0.362 Sum_probs=194.8
Q ss_pred HHHHHHhccCcccceeeccCccEEEEEEe-CCCcEEEEEEeccccccHHHHHHHHHHhCCC-CCCCCcceeEEEEe----
Q 006982 298 SDLMKATNSFSKNNIIGSGRTGTMYKALL-EDGTSLMVKRLQDSQRSEKEFVAEMATLGSV-KNRNLVPLLGFCMA---- 371 (623)
Q Consensus 298 ~~l~~~~~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~---- 371 (623)
.++....++|...+.||+|+||.||+|.. .+++.||+|++.........+.+|++++.++ +||||+++++++..
T Consensus 17 ~~l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~ 96 (326)
T 2x7f_A 17 SALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPP 96 (326)
T ss_dssp CCCCCCTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSSTTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC--
T ss_pred hhccCCCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCcccHHHHHHHHHHHHhccCCCCeeeeeeEEeeccCc
Confidence 33344567899999999999999999996 4789999999976666667899999999998 89999999999987
Q ss_pred --CCeeeEEEecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEe
Q 006982 372 --KKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKIS 449 (623)
Q Consensus 372 --~~~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~ 449 (623)
....++||||+++|+|.+++.... ...+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+
T Consensus 97 ~~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~kl~ 171 (326)
T 2x7f_A 97 GMDDQLWLVMEFCGAGSVTDLIKNTK--GNTLKEEWIAYICREILRGLSHLHQH---KVIHRDIKGQNVLLTENAEVKLV 171 (326)
T ss_dssp CCCCEEEEEEECCTTEEHHHHHHHSG--GGCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTCCEEEC
T ss_pred cccceEEEEEEcCCCCcHHHHHHhcc--cCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCcHHHEEEcCCCCEEEe
Confidence 457899999999999999996432 25688999999999999999999999 99999999999999999999999
Q ss_pred ecccccccCCCCCcccccccCCCCcccccCccccc-----CCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCcccccccH
Q 006982 450 DFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYAR-----TLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNL 524 (623)
Q Consensus 450 Dfgla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~s~k~DV~sfGvil~elltg~~P~~~~~~~~~~~~~l 524 (623)
|||++......... .....||+.|+|||++. ...++.++||||||+++|||++|+.||......
T Consensus 172 Dfg~~~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~------- 240 (326)
T 2x7f_A 172 DFGVSAQLDRTVGR----RNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPM------- 240 (326)
T ss_dssp CCTTTC-----------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCHH-------
T ss_pred eCcCceecCcCccc----cccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcHH-------
Confidence 99999876432111 12234899999999987 567899999999999999999999999643211
Q ss_pred HHHHHHHhccCchhhhhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHH
Q 006982 525 VEWIAQLSSTGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQ 581 (623)
Q Consensus 525 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~ 581 (623)
......... . .+.+.....++++..+ +..|+. .||++||++.|+++
T Consensus 241 -~~~~~~~~~-~-----~~~~~~~~~~~~l~~l---i~~~l~-~dp~~Rps~~~ll~ 286 (326)
T 2x7f_A 241 -RALFLIPRN-P-----APRLKSKKWSKKFQSF---IESCLV-KNHSQRPATEQLMK 286 (326)
T ss_dssp -HHHHHHHHS-C-----CCCCSCSCSCHHHHHH---HHHHCC-SSGGGSCCHHHHHT
T ss_pred -HHHHHhhcC-c-----cccCCccccCHHHHHH---HHHHhc-cChhhCCCHHHHhh
Confidence 101111000 0 0111112233444444 446766 99999999999987
No 189
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.1e-37 Score=326.83 Aligned_cols=253 Identities=20% Similarity=0.262 Sum_probs=194.7
Q ss_pred ccCcccceeeccCccEEEEEEe----CCCcEEEEEEecccc-----ccHHHHHHHHHHhCCC-CCCCCcceeEEEEeCCe
Q 006982 305 NSFSKNNIIGSGRTGTMYKALL----EDGTSLMVKRLQDSQ-----RSEKEFVAEMATLGSV-KNRNLVPLLGFCMAKKE 374 (623)
Q Consensus 305 ~~f~~~~~lG~G~~g~Vy~~~~----~~~~~vavK~~~~~~-----~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~ 374 (623)
++|...+.||+|+||.||+++. .+++.||+|+++... .....+.+|++++.++ +||||+++++++.....
T Consensus 54 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~ 133 (355)
T 1vzo_A 54 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETK 133 (355)
T ss_dssp GGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETTE
T ss_pred cceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCce
Confidence 5789999999999999999997 478999999987532 2345677899999999 69999999999999999
Q ss_pred eeEEEecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccc
Q 006982 375 RLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLA 454 (623)
Q Consensus 375 ~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla 454 (623)
.++||||+++|+|.+++.. ...+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|||++
T Consensus 134 ~~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~DfG~a 206 (355)
T 1vzo_A 134 LHLILDYINGGELFTHLSQ----RERFTEHEVQIYVGEIVLALEHLHKL---GIIYRDIKLENILLDSNGHVVLTDFGLS 206 (355)
T ss_dssp EEEEECCCCSCBHHHHHHH----HSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEESCSSEE
T ss_pred EEEEeecCCCCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCcEEEeeCCCC
Confidence 9999999999999999963 24689999999999999999999999 9999999999999999999999999999
Q ss_pred cccCCCCCcccccccCCCCcccccCcccccC--CCCCcchhHHHHHHHHHHHHhCCCCCCCCCCcccccccHHHHHHHHh
Q 006982 455 RLMNPIDTHLSTFVNGEFGDLGYVAPEYART--LVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLS 532 (623)
Q Consensus 455 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~s~k~DV~sfGvil~elltg~~P~~~~~~~~~~~~~l~~~~~~~~ 532 (623)
+........ ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||....... ..........
T Consensus 207 ~~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~----~~~~~~~~~~ 279 (355)
T 1vzo_A 207 KEFVADETE---RAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKN----SQAEISRRIL 279 (355)
T ss_dssp EECCGGGGG---GGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCC----CHHHHHHHHH
T ss_pred eecccCCCC---cccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccc----hHHHHHHHHh
Confidence 876432211 1122348999999999985 357899999999999999999999997543221 1222221111
Q ss_pred ccCchhhhhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCC-----CHHHHHHHH
Q 006982 533 STGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERP-----TMFEVYQFL 583 (623)
Q Consensus 533 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RP-----s~~ev~~~L 583 (623)
.... .. ....... +..++..|+. .||++|| +++|+++..
T Consensus 280 ~~~~-------~~-~~~~~~~---~~~li~~~L~-~dP~~R~~~~~~s~~ell~h~ 323 (355)
T 1vzo_A 280 KSEP-------PY-PQEMSAL---AKDLIQRLLM-KDPKKRLGCGPRDADEIKEHL 323 (355)
T ss_dssp HCCC-------CC-CTTSCHH---HHHHHHHHTC-SSGGGSTTSSTTTHHHHHTSG
T ss_pred ccCC-------CC-CcccCHH---HHHHHHHHhh-hCHHHhcCCCCCCHHHHHcCc
Confidence 1100 00 0112233 3344456666 9999999 899987654
No 190
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=100.00 E-value=3.7e-37 Score=310.73 Aligned_cols=246 Identities=18% Similarity=0.329 Sum_probs=189.8
Q ss_pred ccCcccceeeccCccEEEEEEeC-CCcEEEEEEecccc----ccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEE
Q 006982 305 NSFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQ----RSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVY 379 (623)
Q Consensus 305 ~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 379 (623)
++|...+.||+|+||.||+|... +++.|++|++.... ...+.+.+|++++.+++||||+++++++.+.+..++|+
T Consensus 11 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 90 (276)
T 2h6d_A 11 GHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVM 90 (276)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred ccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEEEE
Confidence 56888999999999999999976 78999999986532 34567889999999999999999999999999999999
Q ss_pred ecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCC
Q 006982 380 KHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNP 459 (623)
Q Consensus 380 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~ 459 (623)
||+++++|.+++... ..+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||++.....
T Consensus 91 e~~~~~~L~~~l~~~----~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~ 163 (276)
T 2h6d_A 91 EYVSGGELFDYICKH----GRVEEMEARRLFQQILSAVDYCHRH---MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSD 163 (276)
T ss_dssp ECCCSCBHHHHHHHH----CSCCHHHHHHHHHHHHHHHHHHHHH---CSSCCCCCGGGEEECTTSCEEECCCCGGGCCCC
T ss_pred eccCCCcHHHHHhcc----CCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCChhhEEECCCCCEEEeecccccccCC
Confidence 999999999999632 4589999999999999999999999 999999999999999999999999999987654
Q ss_pred CCCcccccccCCCCcccccCcccccCCCC-CcchhHHHHHHHHHHHHhCCCCCCCCCCcccccccHHHHHHHHhccCchh
Q 006982 460 IDTHLSTFVNGEFGDLGYVAPEYARTLVA-TPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQ 538 (623)
Q Consensus 460 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-s~k~DV~sfGvil~elltg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 538 (623)
... .....+++.|+|||.+.+..+ +.++||||||+++|||++|+.||..... ............
T Consensus 164 ~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~--------~~~~~~~~~~~~-- 228 (276)
T 2h6d_A 164 GEF-----LRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHV--------PTLFKKIRGGVF-- 228 (276)
T ss_dssp ------------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSSH--------HHHHHHHHHCCC--
T ss_pred Ccc-----eecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCcH--------HHHHHHhhcCcc--
Confidence 221 122347899999999987765 6899999999999999999999964221 111111110000
Q ss_pred hhhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHH
Q 006982 539 DAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQF 582 (623)
Q Consensus 539 ~~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~ 582 (623)
. .....+.++ ..++..|+. .||++|||+.|+++.
T Consensus 229 -----~-~~~~~~~~l---~~li~~~l~-~~p~~Rps~~~~l~h 262 (276)
T 2h6d_A 229 -----Y-IPEYLNRSV---ATLLMHMLQ-VDPLKRATIKDIREH 262 (276)
T ss_dssp -----C-CCTTSCHHH---HHHHHHHTC-SSGGGSCCHHHHHHS
T ss_pred -----c-CchhcCHHH---HHHHHHHcc-CChhhCCCHHHHHhC
Confidence 0 011123333 344456666 999999999999874
No 191
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=100.00 E-value=9.7e-37 Score=309.17 Aligned_cols=244 Identities=20% Similarity=0.317 Sum_probs=196.4
Q ss_pred ccCcccceeeccCccEEEEEEeC-CCcEEEEEEecccc----ccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEE
Q 006982 305 NSFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQ----RSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVY 379 (623)
Q Consensus 305 ~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 379 (623)
++|...+.||+|+||.||+|... ++..||+|++.... .....+.+|++++.+++||||+++++++.+.+..++|+
T Consensus 14 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 93 (284)
T 2vgo_A 14 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLML 93 (284)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEEEE
Confidence 56888999999999999999975 57889999986532 23567899999999999999999999999999999999
Q ss_pred ecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCC
Q 006982 380 KHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNP 459 (623)
Q Consensus 380 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~ 459 (623)
||+++|+|.+++... ..+++..++.++.|++.||.|||+. +|+||||||+||+++.++.+||+|||++.....
T Consensus 94 e~~~~~~L~~~l~~~----~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~ 166 (284)
T 2vgo_A 94 EFAPRGELYKELQKH----GRFDEQRSATFMEELADALHYCHER---KVIHRDIKPENLLMGYKGELKIADFGWSVHAPS 166 (284)
T ss_dssp CCCTTEEHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECTTCCEEECCCTTCEECSS
T ss_pred EeCCCCcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEEcCCCCEEEecccccccCcc
Confidence 999999999998632 4589999999999999999999999 999999999999999999999999999976543
Q ss_pred CCCcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCcccccccHHHHHHHHhccCchhh
Q 006982 460 IDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQD 539 (623)
Q Consensus 460 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 539 (623)
.. .....|++.|+|||.+.+..++.++||||||+++|||++|+.||...... ......... .
T Consensus 167 ~~------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~--------~~~~~~~~~-~--- 228 (284)
T 2vgo_A 167 LR------RRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHT--------ETHRRIVNV-D--- 228 (284)
T ss_dssp SC------BCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHH--------HHHHHHHTT-C---
T ss_pred cc------cccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCHh--------HHHHHHhcc-c---
Confidence 21 12235899999999999989999999999999999999999999753211 111111110 0
Q ss_pred hhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHH
Q 006982 540 AIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQ 581 (623)
Q Consensus 540 ~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~ 581 (623)
..+ ....++++. .++..|+. .||.+||+++|+++
T Consensus 229 ---~~~-~~~~~~~~~---~li~~~l~-~~p~~Rps~~~ll~ 262 (284)
T 2vgo_A 229 ---LKF-PPFLSDGSK---DLISKLLR-YHPPQRLPLKGVME 262 (284)
T ss_dssp ---CCC-CTTSCHHHH---HHHHHHSC-SSGGGSCCHHHHHT
T ss_pred ---cCC-CCcCCHHHH---HHHHHHhh-cCHhhCCCHHHHhh
Confidence 000 011233444 44456666 99999999999986
No 192
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=100.00 E-value=1.2e-36 Score=330.13 Aligned_cols=266 Identities=19% Similarity=0.246 Sum_probs=201.3
Q ss_pred ccCcccceeeccCccEEEEEEe-CCCcEEEEEEeccccccHHHHHHHHHHhCCCCCC-CCcceeEEEEeCCeeeEEEecC
Q 006982 305 NSFSKNNIIGSGRTGTMYKALL-EDGTSLMVKRLQDSQRSEKEFVAEMATLGSVKNR-NLVPLLGFCMAKKERLLVYKHM 382 (623)
Q Consensus 305 ~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~h~-niv~l~~~~~~~~~~~lV~e~~ 382 (623)
++|...+.||+|+||.||+|.. .+++.||||++..... ...+..|++++..++|+ ++..+..++...+..++||||+
T Consensus 7 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~-~~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvme~~ 85 (483)
T 3sv0_A 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK-HPQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVMDLL 85 (483)
T ss_dssp TTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCS-SCCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEEECC
T ss_pred CcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEeccccc-cHHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEEECC
Confidence 5788899999999999999996 5789999998764432 23578899999999874 5555666667778889999999
Q ss_pred CCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceee---CCCCCeEEeecccccccCC
Q 006982 383 PNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILL---DDDFEPKISDFGLARLMNP 459 (623)
Q Consensus 383 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl---~~~~~~kl~Dfgla~~~~~ 459 (623)
+++|.+++... ...+++..++.++.|++.||+|||+. +|+||||||+|||+ ++++.+||+|||+++....
T Consensus 86 -g~sL~~ll~~~---~~~l~~~~~~~i~~qi~~aL~yLH~~---gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~ 158 (483)
T 3sv0_A 86 -GPSLEDLFNFC---SRKLSLKTVLMLADQMINRVEFVHSK---SFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRD 158 (483)
T ss_dssp -CCBHHHHHHHT---TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECCGGGTTCEEECCCTTCEECBC
T ss_pred -CCCHHHHHHhh---cCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccCcceEEEecCCCCCeEEEEeCCcceeccC
Confidence 99999999632 34699999999999999999999999 99999999999999 6889999999999987654
Q ss_pred CCCccc---ccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCcccccccHHHHHHHHhccCc
Q 006982 460 IDTHLS---TFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQ 536 (623)
Q Consensus 460 ~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~ 536 (623)
...... .......||+.|+|||++.+..++.++|||||||++|||++|+.||......... ..+.. +........
T Consensus 159 ~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~-~~~~~-i~~~~~~~~ 236 (483)
T 3sv0_A 159 TSTHQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKK-QKYEK-ISEKKVATS 236 (483)
T ss_dssp TTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSHH-HHHHH-HHHHHHHSC
T ss_pred CccccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchhHH-HHHHH-Hhhcccccc
Confidence 322211 1112345899999999999999999999999999999999999999764332111 11111 111100111
Q ss_pred hhhhhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHhhccc
Q 006982 537 LQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAIGERY 590 (623)
Q Consensus 537 ~~~~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~L~~i~~~~ 590 (623)
+..+. ...+++ +..++..|+. .+|++||++.+|++.|+++..+.
T Consensus 237 ~~~l~------~~~p~~---l~~li~~cl~-~dP~~RPs~~el~~~L~~l~~~~ 280 (483)
T 3sv0_A 237 IEALC------RGYPTE---FASYFHYCRS-LRFDDKPDYSYLKRLFRDLFIRE 280 (483)
T ss_dssp HHHHH------TTSCHH---HHHHHHHHHT-CCTTCCCCHHHHHHHHHHHHHHT
T ss_pred HHHHh------cCCcHH---HHHHHHHHhc-CChhhCcCHHHHHHHHHHHHHHc
Confidence 11111 122334 4445556776 99999999999999999986544
No 193
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=100.00 E-value=6.7e-38 Score=318.55 Aligned_cols=259 Identities=24% Similarity=0.399 Sum_probs=192.1
Q ss_pred ccCcccceeeccCccEEEEEEeC--CCc--EEEEEEeccc----cccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeee
Q 006982 305 NSFSKNNIIGSGRTGTMYKALLE--DGT--SLMVKRLQDS----QRSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERL 376 (623)
Q Consensus 305 ~~f~~~~~lG~G~~g~Vy~~~~~--~~~--~vavK~~~~~----~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 376 (623)
++|...+.||+|+||.||+|.+. ++. .||+|+++.. ....+.+.+|++++.+++||||+++++++.+.. .+
T Consensus 18 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~~ 96 (291)
T 1u46_A 18 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-MK 96 (291)
T ss_dssp GGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-CE
T ss_pred hHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC-ce
Confidence 56888999999999999999853 333 6899998653 234567899999999999999999999998754 88
Q ss_pred EEEecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccc
Q 006982 377 LVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARL 456 (623)
Q Consensus 377 lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~ 456 (623)
+|+||+++|+|.+++... ...+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||++..
T Consensus 97 ~v~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~~ 170 (291)
T 1u46_A 97 MVTELAPLGSLLDRLRKH---QGHFLLGTLSRYAVQVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRA 170 (291)
T ss_dssp EEEECCTTCBHHHHHHHH---GGGSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEEETTEEEECCCTTCEE
T ss_pred eeEecccCCCHHHHHHhc---cCCcCHHHHHHHHHHHHHHHHHHHhC---CcccCCCchheEEEcCCCCEEEcccccccc
Confidence 999999999999999642 24689999999999999999999999 999999999999999999999999999987
Q ss_pred cCCCCCcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCcccccccHHHHHHHHhccC
Q 006982 457 MNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVT-GERPTNVAKAPETFKGNLVEWIAQLSSTG 535 (623)
Q Consensus 457 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~ellt-g~~P~~~~~~~~~~~~~l~~~~~~~~~~~ 535 (623)
........ .......+|..|+|||.+.+..++.++||||||+++|||++ |+.||..... .+.........
T Consensus 171 ~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~--------~~~~~~~~~~~ 241 (291)
T 1u46_A 171 LPQNDDHY-VMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNG--------SQILHKIDKEG 241 (291)
T ss_dssp CCC-CCEE-EC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCH--------HHHHHHHHTSC
T ss_pred ccccccch-hhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCH--------HHHHHHHHccC
Confidence 65432211 11222347889999999988888999999999999999999 9999975321 11122111111
Q ss_pred chhhhhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHhhcc
Q 006982 536 QLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAIGER 589 (623)
Q Consensus 536 ~~~~~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~L~~i~~~ 589 (623)
.... .....+++ +.+++..|+. .||++|||+.++++.|+++...
T Consensus 242 ~~~~------~~~~~~~~---l~~li~~~l~-~~p~~Rps~~~l~~~l~~~~~~ 285 (291)
T 1u46_A 242 ERLP------RPEDCPQD---IYNVMVQCWA-HKPEDRPTFVALRDFLLEAQPT 285 (291)
T ss_dssp CCCC------CCTTCCHH---HHHHHHHHTC-SSGGGSCCHHHHHHHHHHHC--
T ss_pred CCCC------CCcCcCHH---HHHHHHHHcc-CCcccCcCHHHHHHHHHHhCcc
Confidence 0000 01122333 4444556776 9999999999999999988654
No 194
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=100.00 E-value=3.7e-37 Score=314.88 Aligned_cols=263 Identities=25% Similarity=0.376 Sum_probs=181.3
Q ss_pred hccCcccceeeccCccEEEEEEe-CCCcEEEEEEecccc--ccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEEe
Q 006982 304 TNSFSKNNIIGSGRTGTMYKALL-EDGTSLMVKRLQDSQ--RSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYK 380 (623)
Q Consensus 304 ~~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e 380 (623)
.++|...+.||+|+||.||+|.. .++..||+|++.... ...+.+.+|++++.+++||||+++++++...+..++|||
T Consensus 14 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 93 (303)
T 2vwi_A 14 RDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMK 93 (303)
T ss_dssp CCCCEEEEECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEESSSCEEEEEE
T ss_pred hhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcEEEeh
Confidence 46789999999999999999995 468999999986542 345678899999999999999999999999999999999
Q ss_pred cCCCCCHhhhccCC----CCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccc
Q 006982 381 HMPNGSLYDLLHPA----DDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARL 456 (623)
Q Consensus 381 ~~~~gsL~~~l~~~----~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~ 456 (623)
|+++|+|.+++... ......+++..++.++.|++.||.|||+. +|+||||||+||+++.++.+||+|||++..
T Consensus 94 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~ 170 (303)
T 2vwi_A 94 LLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKN---GQIHRDVKAGNILLGEDGSVQIADFGVSAF 170 (303)
T ss_dssp CCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTCCEEECCCHHHHH
T ss_pred hccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhC---CCCCCCCChhhEEEcCCCCEEEEeccchhe
Confidence 99999999998531 11235689999999999999999999999 999999999999999999999999999987
Q ss_pred cCCCCCc-ccccccCCCCcccccCcccccC-CCCCcchhHHHHHHHHHHHHhCCCCCCCCCCcccccccHHHHHHHHhcc
Q 006982 457 MNPIDTH-LSTFVNGEFGDLGYVAPEYART-LVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSST 534 (623)
Q Consensus 457 ~~~~~~~-~~~~~~~~~gt~~y~aPE~~~~-~~~s~k~DV~sfGvil~elltg~~P~~~~~~~~~~~~~l~~~~~~~~~~ 534 (623)
....... .........||+.|+|||.+.+ ..++.++||||||+++|||++|+.||....... ... ......
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~----~~~---~~~~~~ 243 (303)
T 2vwi_A 171 LATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMK----VLM---LTLQND 243 (303)
T ss_dssp CC---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGG----HHH---HHHTSS
T ss_pred eccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchhh----HHH---HHhccC
Confidence 6432211 1111223458999999999875 568999999999999999999999997543211 110 000000
Q ss_pred -Cchhh-hhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHH
Q 006982 535 -GQLQD-AIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQ 581 (623)
Q Consensus 535 -~~~~~-~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~ 581 (623)
..... ..+.... ....+++. +++..|+. .||++||++.|+++
T Consensus 244 ~~~~~~~~~~~~~~-~~~~~~~~---~li~~~l~-~dp~~Rps~~~ll~ 287 (303)
T 2vwi_A 244 PPSLETGVQDKEML-KKYGKSFR---KMISLCLQ-KDPEKRPTAAELLR 287 (303)
T ss_dssp CCCTTC-----CCC-CCCCHHHH---HHHHHHCC-SSGGGSCCHHHHHT
T ss_pred CCccccccccchhh-hhhhHHHH---HHHHHHcc-CChhhCcCHHHHhh
Confidence 00100 0111111 11233443 44556776 99999999999976
No 195
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=100.00 E-value=1.5e-37 Score=323.71 Aligned_cols=253 Identities=22% Similarity=0.324 Sum_probs=192.4
Q ss_pred hccCcccceeeccCccEEEEEEe-CCCcEEEEEEecccc--ccHHHHHHHHHH-hCCCCCCCCcceeEEEEeCCeeeEEE
Q 006982 304 TNSFSKNNIIGSGRTGTMYKALL-EDGTSLMVKRLQDSQ--RSEKEFVAEMAT-LGSVKNRNLVPLLGFCMAKKERLLVY 379 (623)
Q Consensus 304 ~~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~e~~~-l~~l~h~niv~l~~~~~~~~~~~lV~ 379 (623)
.++|...+.||+|+||.||+|.. .+|+.||+|++.... .....+..|... ++.++||||+++++++.+.+..++||
T Consensus 50 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~ 129 (340)
T 3an0_A 50 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICM 129 (340)
T ss_dssp SSCEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCCCCHHHHHHHHHHHHHHTTCCCTTTCCEEEEEECSSCEEEEE
T ss_pred hhheeEeeEecccCCEEEEEEEEcCCCCEEEEEEeccccCcHHHHHHHHHHHHHHhhcCCCcEEEEeeEEEeCCcEEEEH
Confidence 45788889999999999999996 578999999997643 233455566655 78899999999999999999999999
Q ss_pred ecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCC
Q 006982 380 KHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNP 459 (623)
Q Consensus 380 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~ 459 (623)
||+++ +|.+++.........+++..++.++.|++.||+|||++. +|+||||||+||+++.++.+||+|||+++....
T Consensus 130 e~~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~--~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~ 206 (340)
T 3an0_A 130 ELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKL--SVIHRDVKPSNVLINALGQVKMCDFGISGYLVD 206 (340)
T ss_dssp CCCSE-EHHHHHHHHHHTSCCCCHHHHHHHHHHHHHHHHHHHHHT--CCCCCSCCSTTEEECSTTCEEECCCSHHHHHSC
T ss_pred HHhhC-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcC--CeecCCCCHHHEEECCCCCEEEeeCCCceeccc
Confidence 99975 999888542223467999999999999999999999743 899999999999999999999999999987643
Q ss_pred CCCcccccccCCCCcccccCccccc----CCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCcccccccHHHHHHHHhccC
Q 006982 460 IDTHLSTFVNGEFGDLGYVAPEYAR----TLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTG 535 (623)
Q Consensus 460 ~~~~~~~~~~~~~gt~~y~aPE~~~----~~~~s~k~DV~sfGvil~elltg~~P~~~~~~~~~~~~~l~~~~~~~~~~~ 535 (623)
.. ......||+.|+|||++. ...++.++|||||||++|||++|+.||...... ...+.......
T Consensus 207 ~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~tg~~p~~~~~~~-------~~~~~~~~~~~ 274 (340)
T 3an0_A 207 SV-----AKTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTP-------FQQLKQVVEEP 274 (340)
T ss_dssp HH-----HHHHSSCCCCCCCHHHHSCCTTCCSCCHHHHHHHHHHHHHHHHHTSCSSCCCSCH-------HHHHHHHHHSC
T ss_pred cc-----ccccCCCCccccCccccccccccCCCCchhhHHHHHHHHHHHHHCCCCCccccch-------HHHHHHHhcCC
Confidence 11 111235899999999964 347899999999999999999999999753221 11111111110
Q ss_pred chhhhhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHH
Q 006982 536 QLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQ 581 (623)
Q Consensus 536 ~~~~~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~ 581 (623)
. +.+.....+++ +..++..|+. .||++||++.|+++
T Consensus 275 ~------~~~~~~~~~~~---~~~li~~~l~-~dp~~Rps~~ell~ 310 (340)
T 3an0_A 275 S------PQLPADKFSAE---FVDFTSQCLK-KNSKERPTYPELMQ 310 (340)
T ss_dssp C------CCCCGGGSCHH---HHHHHHHHTC-SSGGGSCCHHHHTT
T ss_pred C------CCCCcccCCHH---HHHHHHHHcc-CCcccCcCHHHHhc
Confidence 0 00001112333 4445556776 99999999999987
No 196
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=100.00 E-value=7.8e-37 Score=333.92 Aligned_cols=250 Identities=21% Similarity=0.321 Sum_probs=197.3
Q ss_pred hccCcccceeeccCccEEEEEEeC-CCcEEEEEEeccc----cccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEE
Q 006982 304 TNSFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDS----QRSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLV 378 (623)
Q Consensus 304 ~~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~----~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV 378 (623)
.++|...+.||+|+||.||++... +++.||+|++... ......+.+|++++++++||||+++++++.+....++|
T Consensus 25 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 104 (484)
T 3nyv_A 25 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLV 104 (484)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred cCceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEE
Confidence 357888999999999999999975 7899999998543 34567899999999999999999999999999999999
Q ss_pred EecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceee---CCCCCeEEeeccccc
Q 006982 379 YKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILL---DDDFEPKISDFGLAR 455 (623)
Q Consensus 379 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl---~~~~~~kl~Dfgla~ 455 (623)
+||+++|+|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+|||+ +.++.+||+|||+++
T Consensus 105 ~e~~~~~~L~~~~~~----~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~ 177 (484)
T 3nyv_A 105 GEVYTGGELFDEIIS----RKRFSEVDAARIIRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLST 177 (484)
T ss_dssp ECCCCSCBHHHHHHT----CSCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESSSSTTCCEEECCTTHHH
T ss_pred EecCCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEEecCCCCCcEEEEeeeeeE
Confidence 999999999999863 35689999999999999999999999 99999999999999 578899999999998
Q ss_pred ccCCCCCcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCcccccccHHHHHHHHhccC
Q 006982 456 LMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTG 535 (623)
Q Consensus 456 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~~~~~~~~~~~l~~~~~~~~~~~ 535 (623)
........ ....||+.|+|||++.+ .++.++||||+||++|||++|+.||...... +.........
T Consensus 178 ~~~~~~~~-----~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~--------~~~~~i~~~~ 243 (484)
T 3nyv_A 178 HFEASKKM-----KDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANEY--------DILKKVEKGK 243 (484)
T ss_dssp HBCCCCSH-----HHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--------HHHHHHHHCC
T ss_pred Eccccccc-----ccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCCCCHH--------HHHHHHHcCC
Confidence 76543221 12348999999999876 6899999999999999999999999753221 1111111110
Q ss_pred chhhhhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHH
Q 006982 536 QLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQF 582 (623)
Q Consensus 536 ~~~~~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~ 582 (623)
.. .-.+.+ ...++++.. ++..|+. .||++|||+.|+++.
T Consensus 244 ~~--~~~~~~--~~~s~~~~~---li~~~L~-~dp~~R~s~~e~l~h 282 (484)
T 3nyv_A 244 YT--FELPQW--KKVSESAKD---LIRKMLT-YVPSMRISARDALDH 282 (484)
T ss_dssp CC--CCSGGG--GGSCHHHHH---HHHHHTC-SSGGGSCCHHHHHTS
T ss_pred CC--CCCccc--ccCCHHHHH---HHHHHCC-CChhHCcCHHHHhhC
Confidence 00 000011 112334444 4445665 999999999999864
No 197
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=100.00 E-value=4e-37 Score=333.78 Aligned_cols=195 Identities=22% Similarity=0.327 Sum_probs=153.5
Q ss_pred ccCcccceeeccCccEEEEEEeC-CCcEEEEEEecccc---ccHHHHHHHHHHhCCCCCCCCcceeEEEEeC-----Cee
Q 006982 305 NSFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQ---RSEKEFVAEMATLGSVKNRNLVPLLGFCMAK-----KER 375 (623)
Q Consensus 305 ~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~-----~~~ 375 (623)
++|...+.||+|+||.||+|... +++.||+|++.... ...+.+.+|++++.+++||||+++++++... ...
T Consensus 53 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 132 (458)
T 3rp9_A 53 DRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDEL 132 (458)
T ss_dssp TTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCE
T ss_pred CCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCceE
Confidence 57899999999999999999855 78999999986532 3346788999999999999999999998543 467
Q ss_pred eEEEecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeeccccc
Q 006982 376 LLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLAR 455 (623)
Q Consensus 376 ~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~ 455 (623)
++||||+ +|+|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++
T Consensus 133 ~lv~e~~-~~~L~~~~~~----~~~l~~~~~~~~~~qi~~aL~~LH~~---~iiHrDlKp~NILl~~~~~~kl~DFGla~ 204 (458)
T 3rp9_A 133 YVVLEIA-DSDFKKLFRT----PVYLTELHIKTLLYNLLVGVKYVHSA---GILHRDLKPANCLVNQDCSVKVCDFGLAR 204 (458)
T ss_dssp EEEECCC-SEEHHHHHHS----SCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTCCEEECCCTTCB
T ss_pred EEEEecc-ccchhhhccc----CCCCCHHHHHHHHHHHHHHHHHHHhC---CcCCCCCChhhEEECCCCCEeecccccch
Confidence 9999998 5799999863 35689999999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCCcc-----------------------cccccCCCCcccccCcccc-cCCCCCcchhHHHHHHHHHHHHhC
Q 006982 456 LMNPIDTHL-----------------------STFVNGEFGDLGYVAPEYA-RTLVATPKGDVYSFGTVLLELVTG 507 (623)
Q Consensus 456 ~~~~~~~~~-----------------------~~~~~~~~gt~~y~aPE~~-~~~~~s~k~DV~sfGvil~elltg 507 (623)
......... .....+..||+.|+|||++ ....++.++|||||||++|||++|
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg 280 (458)
T 3rp9_A 205 TVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNM 280 (458)
T ss_dssp CTTSCTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTT
T ss_pred hccCccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHh
Confidence 764321110 0122345689999999976 566799999999999999999994
No 198
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=100.00 E-value=4.7e-37 Score=318.55 Aligned_cols=200 Identities=20% Similarity=0.296 Sum_probs=164.6
Q ss_pred HhccCcccceeeccCccEEEEEEeC-CCcEEEEEEeccccc---cHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEE
Q 006982 303 ATNSFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQR---SEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLV 378 (623)
Q Consensus 303 ~~~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV 378 (623)
..++|...+.||+|+||.||+|... +++.||+|++..... ..+.+.+|++++++++||||+++++++.+.+..++|
T Consensus 32 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 111 (329)
T 3gbz_A 32 SIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLHLI 111 (329)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTEEEEE
T ss_pred chhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEEEE
Confidence 3468999999999999999999854 788999999975432 245678999999999999999999999999999999
Q ss_pred EecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceee-----CCCCCeEEeeccc
Q 006982 379 YKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILL-----DDDFEPKISDFGL 453 (623)
Q Consensus 379 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl-----~~~~~~kl~Dfgl 453 (623)
|||+++ +|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+|||+ ++++.+||+|||+
T Consensus 112 ~e~~~~-~L~~~~~~~----~~~~~~~~~~i~~ql~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~ 183 (329)
T 3gbz_A 112 FEYAEN-DLKKYMDKN----PDVSMRVIKSFLYQLINGVNFCHSR---RCLHRDLKPQNLLLSVSDASETPVLKIGDFGL 183 (329)
T ss_dssp EECCSE-EHHHHHHHC----TTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEC-----CCEEEECCTTH
T ss_pred EecCCC-CHHHHHhhc----CCCCHHHHHHHHHHHHHHHHHHHhC---CEECCCCCHHHEEEecCCCCccceEEECcCCC
Confidence 999984 999998633 4589999999999999999999999 99999999999999 4555699999999
Q ss_pred ccccCCCCCcccccccCCCCcccccCcccccCC-CCCcchhHHHHHHHHHHHHhCCCCCCCC
Q 006982 454 ARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTL-VATPKGDVYSFGTVLLELVTGERPTNVA 514 (623)
Q Consensus 454 a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~k~DV~sfGvil~elltg~~P~~~~ 514 (623)
++........ .....||+.|+|||++.+. .++.++|||||||++|||++|+.||...
T Consensus 184 a~~~~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~ 241 (329)
T 3gbz_A 184 ARAFGIPIRQ----FTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGD 241 (329)
T ss_dssp HHHHC---------------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred ccccCCcccc----cCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCC
Confidence 9876432211 1223479999999999774 4899999999999999999999999753
No 199
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=2.4e-37 Score=327.66 Aligned_cols=202 Identities=22% Similarity=0.325 Sum_probs=166.4
Q ss_pred HHHhccCcccceeeccCccEEEEEEe-CCCcEEEEEEeccccccHHHHHHHHHHhCCCCCCCCcceeEEEEeC-------
Q 006982 301 MKATNSFSKNNIIGSGRTGTMYKALL-EDGTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGFCMAK------- 372 (623)
Q Consensus 301 ~~~~~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~------- 372 (623)
....++|...+.||+|+||.||+|.. .+++.||+|++..... ...+|++++++++||||+++++++...
T Consensus 3 ~~~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~---~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~ 79 (383)
T 3eb0_A 3 ETSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPR---YKNRELDIMKVLDHVNIIKLVDYFYTTGDEEPKP 79 (383)
T ss_dssp ---CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTT---SCCHHHHHHTTCCCTTBCCEEEEEEEC-------
T ss_pred ccccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcc---hHHHHHHHHHHcCCCCccchhheeeecCcccccc
Confidence 34567899999999999999999985 5789999999865432 223799999999999999999998543
Q ss_pred -------------------------------CeeeEEEecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHH
Q 006982 373 -------------------------------KERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLH 421 (623)
Q Consensus 373 -------------------------------~~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH 421 (623)
...++||||++ |+|.+.+......+..+++..+..++.|+++||+|||
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH 158 (383)
T 3eb0_A 80 PQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIH 158 (383)
T ss_dssp ------------------------------CCEEEEEECCCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred cccccccccccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 23789999998 5888777542223467999999999999999999999
Q ss_pred hcCCCCcEecCCCCCceeeC-CCCCeEEeecccccccCCCCCcccccccCCCCcccccCcccccCC-CCCcchhHHHHHH
Q 006982 422 HNCNPRIIHRNISSKCILLD-DDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTL-VATPKGDVYSFGT 499 (623)
Q Consensus 422 ~~~~~~i~H~dlk~~NILl~-~~~~~kl~Dfgla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~k~DV~sfGv 499 (623)
+. +|+||||||+||+++ +++.+||+|||+++........ ....+|..|+|||.+.+. .++.++||||+||
T Consensus 159 ~~---gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~~-----~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~ 230 (383)
T 3eb0_A 159 SL---GICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEPS-----VAYICSRFYRAPELMLGATEYTPSIDLWSIGC 230 (383)
T ss_dssp TT---TEECSCCCGGGEEEETTTTEEEECCCTTCEECCTTSCC-----CCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHH
T ss_pred HC---cCccCccCHHHEEEcCCCCcEEEEECCCCcccCCCCCC-----cCcccCCCccCHHHhcCCCCCCcchhhhhHHH
Confidence 99 999999999999997 6899999999999876543222 223478999999998764 4899999999999
Q ss_pred HHHHHHhCCCCCCCC
Q 006982 500 VLLELVTGERPTNVA 514 (623)
Q Consensus 500 il~elltg~~P~~~~ 514 (623)
++|||++|+.||...
T Consensus 231 il~ell~g~~pf~~~ 245 (383)
T 3eb0_A 231 VFGELILGKPLFSGE 245 (383)
T ss_dssp HHHHHHHSSCSSCCS
T ss_pred HHHHHHhCCCCCCCC
Confidence 999999999999764
No 200
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=100.00 E-value=5e-37 Score=320.62 Aligned_cols=200 Identities=21% Similarity=0.314 Sum_probs=174.7
Q ss_pred hccCcccceeeccCccEEEEEEeCCCcEEEEEEecccccc------------------HHHHHHHHHHhCCCCCCCCcce
Q 006982 304 TNSFSKNNIIGSGRTGTMYKALLEDGTSLMVKRLQDSQRS------------------EKEFVAEMATLGSVKNRNLVPL 365 (623)
Q Consensus 304 ~~~f~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~------------------~~~~~~e~~~l~~l~h~niv~l 365 (623)
.++|...+.||+|+||.||+|.. ++..||+|++...... .+.+.+|++++.+++||||+++
T Consensus 30 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~ 108 (348)
T 2pml_X 30 INDYRIIRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTC 108 (348)
T ss_dssp ETTEEEEEEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCC
T ss_pred cCceEEEEEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceE
Confidence 35788899999999999999999 8999999998653211 1789999999999999999999
Q ss_pred eEEEEeCCeeeEEEecCCCCCHhhh------ccCCCCCCCccChHHHHHHHHHHHHHHHHHHh-cCCCCcEecCCCCCce
Q 006982 366 LGFCMAKKERLLVYKHMPNGSLYDL------LHPADDTGKSVDWPRRLKIAIGAARGFAWLHH-NCNPRIIHRNISSKCI 438 (623)
Q Consensus 366 ~~~~~~~~~~~lV~e~~~~gsL~~~------l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~-~~~~~i~H~dlk~~NI 438 (623)
++++.+.+..++||||+++|+|.++ +... ....+++..++.++.|++.||.|||+ . +|+||||||+||
T Consensus 109 ~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~--~~~~~~~~~~~~i~~qi~~~l~~lH~~~---~i~H~dl~p~Ni 183 (348)
T 2pml_X 109 EGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKN--YTCFIPIQVIKCIIKSVLNSFSYIHNEK---NICHRDVKPSNI 183 (348)
T ss_dssp SEEEESSSEEEEEEECCTTCBSSEESSSEESSCSS--SCCCCCHHHHHHHHHHHHHHHHHHHHTS---CEECCCCCGGGE
T ss_pred EEEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhc--cccCCCHHHHHHHHHHHHHHHHHHhccC---CEeecCCChHhE
Confidence 9999999999999999999999999 5422 24679999999999999999999999 8 999999999999
Q ss_pred eeCCCCCeEEeecccccccCCCCCcccccccCCCCcccccCcccccCC-CCCc-chhHHHHHHHHHHHHhCCCCCCCCC
Q 006982 439 LLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTL-VATP-KGDVYSFGTVLLELVTGERPTNVAK 515 (623)
Q Consensus 439 Ll~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~-k~DV~sfGvil~elltg~~P~~~~~ 515 (623)
+++.++.+||+|||++...... ......||+.|+|||.+.+. .++. ++||||||+++|||++|+.||....
T Consensus 184 l~~~~~~~kl~dfg~~~~~~~~------~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~ 256 (348)
T 2pml_X 184 LMDKNGRVKLSDFGESEYMVDK------KIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKI 256 (348)
T ss_dssp EECTTSCEEECCCTTCEECBTT------EECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred EEcCCCcEEEeccccccccccc------cccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence 9999999999999999875432 12234589999999999877 5666 9999999999999999999997543
No 201
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=100.00 E-value=2.5e-36 Score=308.29 Aligned_cols=200 Identities=24% Similarity=0.369 Sum_probs=170.8
Q ss_pred ccCcccceeeccCccEEEEEEeC-CCcEEEEEEeccccc---cHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEEe
Q 006982 305 NSFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQR---SEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYK 380 (623)
Q Consensus 305 ~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e 380 (623)
++|...+.||+|+||.||+|... +++.||+|++..... ....+.+|++++.+++||||+++++++.+.+..++|||
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 82 (299)
T 2r3i_A 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFE 82 (299)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred chhhhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHcCCCCeeeEEEEEecCCceEEEEE
Confidence 56888999999999999999975 789999999865432 23678899999999999999999999999999999999
Q ss_pred cCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCCC
Q 006982 381 HMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPI 460 (623)
Q Consensus 381 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~~ 460 (623)
|++ |+|.+++..... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++......
T Consensus 83 ~~~-~~L~~~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~ 156 (299)
T 2r3i_A 83 FLH-QDLKKFMDASAL--TGIPLPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP 156 (299)
T ss_dssp CCS-EEHHHHHHHTTT--TCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECSTTHHHHHCCC
T ss_pred ccc-CCHHHHHHhhhc--cCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHeEEcCCCCEEECcchhhhhccCC
Confidence 998 699999865432 4588999999999999999999999 9999999999999999999999999999876432
Q ss_pred CCcccccccCCCCcccccCcccccCCC-CCcchhHHHHHHHHHHHHhCCCCCCCC
Q 006982 461 DTHLSTFVNGEFGDLGYVAPEYARTLV-ATPKGDVYSFGTVLLELVTGERPTNVA 514 (623)
Q Consensus 461 ~~~~~~~~~~~~gt~~y~aPE~~~~~~-~s~k~DV~sfGvil~elltg~~P~~~~ 514 (623)
... .....+|+.|+|||.+.+.. ++.++||||||+++|||++|+.||...
T Consensus 157 ~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~ 207 (299)
T 2r3i_A 157 VRT----YTHEVVTLWYRAPEILLGAKYYSTAVDIWSLGCIFAEMVTRRALFPGD 207 (299)
T ss_dssp SBC----TTSCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred ccc----cCcccccccccCcHHhhccccCChHHHHHHHHHHHHHHHhCCCCCCCc
Confidence 211 12234789999999987755 789999999999999999999999754
No 202
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=100.00 E-value=1.1e-36 Score=319.80 Aligned_cols=207 Identities=21% Similarity=0.253 Sum_probs=171.1
Q ss_pred CHHHHHHHhccCcccceeeccCccEEEEEEeCCCcEEEEEEeccccc------------cHHHHHHHHHHhCCCCCCCCc
Q 006982 296 RLSDLMKATNSFSKNNIIGSGRTGTMYKALLEDGTSLMVKRLQDSQR------------SEKEFVAEMATLGSVKNRNLV 363 (623)
Q Consensus 296 ~~~~l~~~~~~f~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~------------~~~~~~~e~~~l~~l~h~niv 363 (623)
.+.++....++|...+.||+|+||.||+|...++..||+|++..... ..+.+.+|++++.+++||||+
T Consensus 13 ~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv 92 (362)
T 3pg1_A 13 LIAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNIL 92 (362)
T ss_dssp HHHHHHHTTCSCEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBC
T ss_pred HHHHHHHhccceEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCcc
Confidence 45677888899999999999999999999988899999999864321 136789999999999999999
Q ss_pred ceeEEEEeC-----CeeeEEEecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCce
Q 006982 364 PLLGFCMAK-----KERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCI 438 (623)
Q Consensus 364 ~l~~~~~~~-----~~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NI 438 (623)
++++++... ...++||||++ |+|.+++... ...+++..+..++.|++.||.|||+. +|+||||||+||
T Consensus 93 ~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~NI 165 (362)
T 3pg1_A 93 GLRDIFVHFEEPAMHKLYLVTELMR-TDLAQVIHDQ---RIVISPQHIQYFMYHILLGLHVLHEA---GVVHRDLHPGNI 165 (362)
T ss_dssp CCSEEEEECCTTTCCEEEEEEECCS-EEHHHHHHCT---TSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGE
T ss_pred ceeeeEEeccCCCcceEEEEEccCC-CCHHHHHHhc---ccCCCHHHHHHHHHHHHHHHHHHHHC---cCEecCCChHHE
Confidence 999998653 35689999998 6888888632 34689999999999999999999999 999999999999
Q ss_pred eeCCCCCeEEeecccccccCCCCCcccccccCCCCcccccCcccccC-CCCCcchhHHHHHHHHHHHHhCCCCCCCC
Q 006982 439 LLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYART-LVATPKGDVYSFGTVLLELVTGERPTNVA 514 (623)
Q Consensus 439 Ll~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~k~DV~sfGvil~elltg~~P~~~~ 514 (623)
+++.++.+||+|||+++....... .....||+.|+|||++.+ ..++.++|||||||++|||++|+.||...
T Consensus 166 l~~~~~~~kl~Dfg~~~~~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~ 237 (362)
T 3pg1_A 166 LLADNNDITICDFNLAREDTADAN-----KTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGS 237 (362)
T ss_dssp EECTTCCEEECCTTC--------------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred EEcCCCCEEEEecCcccccccccc-----cceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCC
Confidence 999999999999999985443221 122347899999999876 67899999999999999999999999764
No 203
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=100.00 E-value=1.6e-36 Score=333.08 Aligned_cols=250 Identities=24% Similarity=0.302 Sum_probs=193.8
Q ss_pred hccCcccceeeccCccEEEEEEeC-CCcEEEEEEecccc--------------ccHHHHHHHHHHhCCCCCCCCcceeEE
Q 006982 304 TNSFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQ--------------RSEKEFVAEMATLGSVKNRNLVPLLGF 368 (623)
Q Consensus 304 ~~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--------------~~~~~~~~e~~~l~~l~h~niv~l~~~ 368 (623)
.++|...+.||+|+||.||+|... ++..||+|++.... ...+.+.+|++++.+++||||++++++
T Consensus 35 ~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~ 114 (504)
T 3q5i_A 35 GESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDV 114 (504)
T ss_dssp GGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEEE
T ss_pred ccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEEE
Confidence 467899999999999999999965 57899999986532 234678899999999999999999999
Q ss_pred EEeCCeeeEEEecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCC---C
Q 006982 369 CMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDF---E 445 (623)
Q Consensus 369 ~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~---~ 445 (623)
+.+....++||||+++|+|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++ .
T Consensus 115 ~~~~~~~~lv~e~~~gg~L~~~l~~----~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~ 187 (504)
T 3q5i_A 115 FEDKKYFYLVTEFYEGGELFEQIIN----RHKFDECDAANIMKQILSGICYLHKH---NIVHRDIKPENILLENKNSLLN 187 (504)
T ss_dssp EECSSEEEEEEECCTTCBHHHHHHH----HSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESSTTCCSS
T ss_pred EEcCCEEEEEEecCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCcHHHEEEecCCCCcc
Confidence 9999999999999999999999853 24689999999999999999999999 999999999999998776 6
Q ss_pred eEEeecccccccCCCCCcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCcccccccHH
Q 006982 446 PKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLV 525 (623)
Q Consensus 446 ~kl~Dfgla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~~~~~~~~~~~l~ 525 (623)
+||+|||+++....... .....||+.|+|||++.+ .++.++||||+||++|||++|+.||..... .
T Consensus 188 ~kl~Dfg~a~~~~~~~~-----~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~--------~ 253 (504)
T 3q5i_A 188 IKIVDFGLSSFFSKDYK-----LRDRLGTAYYIAPEVLKK-KYNEKCDVWSCGVIMYILLCGYPPFGGQND--------Q 253 (504)
T ss_dssp EEECCCTTCEECCTTSC-----BCCCCSCTTTCCHHHHTT-CBCTHHHHHHHHHHHHHHHHSSCSSCCSSH--------H
T ss_pred EEEEECCCCEEcCCCCc-----cccccCCcCCCCHHHhcc-CCCchHHHHHHHHHHHHHHhCCCCCCCCCH--------H
Confidence 99999999987654221 223458999999999874 689999999999999999999999975322 1
Q ss_pred HHHHHHhccCchhhhhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHH
Q 006982 526 EWIAQLSSTGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQF 582 (623)
Q Consensus 526 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~ 582 (623)
+............. .+. ....++++..+ +..|+. .||.+|||+.|+++.
T Consensus 254 ~~~~~i~~~~~~~~--~~~--~~~~s~~~~~l---i~~~L~-~dp~~R~t~~e~l~h 302 (504)
T 3q5i_A 254 DIIKKVEKGKYYFD--FND--WKNISDEAKEL---IKLMLT-YDYNKRCTAEEALNS 302 (504)
T ss_dssp HHHHHHHHCCCCCC--HHH--HTTSCHHHHHH---HHHHTC-SSTTTSCCHHHHHTS
T ss_pred HHHHHHHcCCCCCC--ccc--cCCCCHHHHHH---HHHHcC-CChhHCCCHHHHhcC
Confidence 11111111100000 000 01223444444 445665 999999999999864
No 204
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=100.00 E-value=1.3e-36 Score=326.55 Aligned_cols=197 Identities=23% Similarity=0.284 Sum_probs=171.0
Q ss_pred ccCcccceeeccCccEEEEEEeC-CCcEEEEEEeccccccHHHHHHHHHHhCCC------CCCCCcceeEEEEeCCeeeE
Q 006982 305 NSFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQRSEKEFVAEMATLGSV------KNRNLVPLLGFCMAKKERLL 377 (623)
Q Consensus 305 ~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~e~~~l~~l------~h~niv~l~~~~~~~~~~~l 377 (623)
.+|...+.||+|+||.||+|... +++.||+|++.........+.+|++++..+ .|+||+++++++......++
T Consensus 97 ~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~l 176 (429)
T 3kvw_A 97 YRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHICM 176 (429)
T ss_dssp TTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETTEEEE
T ss_pred CcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCccchHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCCeEEE
Confidence 46888999999999999999865 588999999987655556677777776665 67799999999999999999
Q ss_pred EEecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCC--eEEeeccccc
Q 006982 378 VYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFE--PKISDFGLAR 455 (623)
Q Consensus 378 V~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~--~kl~Dfgla~ 455 (623)
||||+. |+|.+++..... ..+++..+..++.|++.||+|||+. +|+||||||+|||++.++. +||+|||+++
T Consensus 177 v~e~~~-~~L~~~l~~~~~--~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlKp~NILl~~~~~~~vkL~DFG~a~ 250 (429)
T 3kvw_A 177 TFELLS-MNLYELIKKNKF--QGFSLPLVRKFAHSILQCLDALHKN---RIIHCDLKPENILLKQQGRSGIKVIDFGSSC 250 (429)
T ss_dssp EECCCC-CBHHHHHHHTTT--CCCCHHHHHHHHHHHHHHHHHHHHH---TEECSCCSGGGEEESSTTSCCEEECCCTTCE
T ss_pred EEeccC-CCHHHHHHhccC--CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEEccCCCcceEEeecccce
Confidence 999996 699999865432 4589999999999999999999999 9999999999999999887 9999999997
Q ss_pred ccCCCCCcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCC
Q 006982 456 LMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVA 514 (623)
Q Consensus 456 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~~ 514 (623)
..... .....||+.|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 251 ~~~~~-------~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~ 302 (429)
T 3kvw_A 251 YEHQR-------VYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGE 302 (429)
T ss_dssp ETTCC-------CCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred ecCCc-------ccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCC
Confidence 65432 12235899999999999999999999999999999999999999764
No 205
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=100.00 E-value=1.4e-36 Score=311.13 Aligned_cols=250 Identities=20% Similarity=0.288 Sum_probs=194.6
Q ss_pred hccCcccceeeccCccEEEEEEeC-CCcEEEEEEecccc-ccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEEec
Q 006982 304 TNSFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQ-RSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKH 381 (623)
Q Consensus 304 ~~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 381 (623)
.++|...+.||+|+||.||++... +++.||+|++.... .....+.+|++++.+++||||+++++++.+....++|+||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 87 (304)
T 2jam_A 8 RKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQL 87 (304)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred hccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEEEEc
Confidence 356888999999999999999965 78999999997543 2345688999999999999999999999999999999999
Q ss_pred CCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceee---CCCCCeEEeecccccccC
Q 006982 382 MPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILL---DDDFEPKISDFGLARLMN 458 (623)
Q Consensus 382 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl---~~~~~~kl~Dfgla~~~~ 458 (623)
+++|+|.+++.. ...+++..+..++.|++.||.|||+. +|+||||||+||++ ++++.+||+|||+++...
T Consensus 88 ~~~~~L~~~l~~----~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~ 160 (304)
T 2jam_A 88 VSGGELFDRILE----RGVYTEKDASLVIQQVLSAVKYLHEN---GIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQ 160 (304)
T ss_dssp CCSCBHHHHHHH----HSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCC
T ss_pred CCCccHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEecCCCCCCEEEccCCcceecC
Confidence 999999999853 24588999999999999999999999 99999999999999 788999999999997644
Q ss_pred CCCCcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCcccccccHHHHHHHHhccCchh
Q 006982 459 PIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQ 538 (623)
Q Consensus 459 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 538 (623)
.... ....||+.|+|||.+.+..++.++||||||+++|||++|+.||..... ............
T Consensus 161 ~~~~------~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~--------~~~~~~i~~~~~-- 224 (304)
T 2jam_A 161 NGIM------STACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETE--------SKLFEKIKEGYY-- 224 (304)
T ss_dssp CBTT------HHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCH--------HHHHHHHHHCCC--
T ss_pred CCcc------ccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCH--------HHHHHHHHcCCC--
Confidence 3211 112378999999999999999999999999999999999999975321 111111111100
Q ss_pred hhhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHH
Q 006982 539 DAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQF 582 (623)
Q Consensus 539 ~~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~ 582 (623)
....+ .....++++.+ ++..|+. .||++|||+.|+++.
T Consensus 225 ~~~~~--~~~~~~~~~~~---li~~~l~-~dp~~Rps~~~~l~h 262 (304)
T 2jam_A 225 EFESP--FWDDISESAKD---FICHLLE-KDPNERYTCEKALSH 262 (304)
T ss_dssp CCCTT--TTTTSCHHHHH---HHHHHHC-SSTTTSCCHHHHHTS
T ss_pred CCCcc--ccccCCHHHHH---HHHHHcC-CChhHCcCHHHHhcC
Confidence 00000 00112344444 4445665 999999999999863
No 206
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=100.00 E-value=1.8e-36 Score=331.05 Aligned_cols=250 Identities=20% Similarity=0.302 Sum_probs=195.5
Q ss_pred hccCcccceeeccCccEEEEEEeC-CCcEEEEEEeccc---cccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEE
Q 006982 304 TNSFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDS---QRSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVY 379 (623)
Q Consensus 304 ~~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 379 (623)
.++|...+.||+|+||.||++... +++.||+|++... ......+.+|++++++++||||+++++++.+....++|+
T Consensus 21 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 100 (486)
T 3mwu_A 21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVG 100 (486)
T ss_dssp HHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEEEE
Confidence 357899999999999999999965 7899999998643 245678899999999999999999999999999999999
Q ss_pred ecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeC---CCCCeEEeecccccc
Q 006982 380 KHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLD---DDFEPKISDFGLARL 456 (623)
Q Consensus 380 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~---~~~~~kl~Dfgla~~ 456 (623)
||+++|+|.+.+.. ...+++..+..++.|++.||.|||+. +|+||||||+|||++ .++.+||+|||+++.
T Consensus 101 e~~~~~~L~~~~~~----~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~ 173 (486)
T 3mwu_A 101 ELYTGGELFDEIIK----RKRFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLSTC 173 (486)
T ss_dssp CCCCSCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEESSSSTTCCEEECSCSCTTT
T ss_pred EcCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCchHHEEEecCCCCCCEEEEECCcCeE
Confidence 99999999998853 24689999999999999999999999 999999999999995 566799999999987
Q ss_pred cCCCCCcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCcccccccHHHHHHHHhccCc
Q 006982 457 MNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQ 536 (623)
Q Consensus 457 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~ 536 (623)
...... .....||+.|+|||++.+ .++.++||||+||++|||++|+.||...... +..........
T Consensus 174 ~~~~~~-----~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~--------~~~~~i~~~~~ 239 (486)
T 3mwu_A 174 FQQNTK-----MKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEY--------DILKRVETGKY 239 (486)
T ss_dssp BCCC---------CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCCSSHH--------HHHHHHHHTCC
T ss_pred CCCCCc-----cCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCHH--------HHHHHHHhCCC
Confidence 644221 223458999999999876 5899999999999999999999999753221 11111111100
Q ss_pred hhhhhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHH
Q 006982 537 LQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQF 582 (623)
Q Consensus 537 ~~~~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~ 582 (623)
.. -.+.+ ...++++.. ++..|+. .||++|||+.|+++.
T Consensus 240 ~~--~~~~~--~~~s~~~~~---li~~~L~-~dp~~R~t~~~~l~h 277 (486)
T 3mwu_A 240 AF--DLPQW--RTISDDAKD---LIRKMLT-FHPSLRITATQCLEH 277 (486)
T ss_dssp CS--CSGGG--GGSCHHHHH---HHHHHTC-SSTTTSCCHHHHHHC
T ss_pred CC--CCccc--CCCCHHHHH---HHHHHcC-CChhhCcCHHHHhcC
Confidence 00 00000 112334443 4445665 999999999999874
No 207
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=100.00 E-value=2.5e-36 Score=309.16 Aligned_cols=251 Identities=19% Similarity=0.283 Sum_probs=192.6
Q ss_pred hccCcccceeeccCccEEEEEEeC-CCcEEEEEEecccc-----ccHHHHHHHHHHhCCCCCCCCcceeEEEEe--CCee
Q 006982 304 TNSFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQ-----RSEKEFVAEMATLGSVKNRNLVPLLGFCMA--KKER 375 (623)
Q Consensus 304 ~~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-----~~~~~~~~e~~~l~~l~h~niv~l~~~~~~--~~~~ 375 (623)
.++|...+.||+|+||.||++... ++..||+|++.... .....+.+|++++.+++||||+++++++.. ....
T Consensus 4 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 83 (305)
T 2wtk_C 4 IGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKM 83 (305)
T ss_dssp -CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---CE
T ss_pred ccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCeE
Confidence 367999999999999999999964 68899999997542 345678999999999999999999999853 4577
Q ss_pred eEEEecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeeccccc
Q 006982 376 LLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLAR 455 (623)
Q Consensus 376 ~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~ 455 (623)
++||||++++ |.+++.... ...+++..++.++.|++.||.|||+. +|+||||||+||+++.++.+||+|||++.
T Consensus 84 ~lv~e~~~~~-l~~~~~~~~--~~~~~~~~~~~~~~qi~~al~~LH~~---~i~H~dlkp~NIl~~~~~~~kl~dfg~~~ 157 (305)
T 2wtk_C 84 YMVMEYCVCG-MQEMLDSVP--EKRFPVCQAHGYFCQLIDGLEYLHSQ---GIVHKDIKPGNLLLTTGGTLKISALGVAE 157 (305)
T ss_dssp EEEEECCSEE-HHHHHHHST--TCSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCE
T ss_pred EEEehhccCC-HHHHHHhCc--ccccCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCcccEEEcCCCcEEeecccccc
Confidence 9999999886 777765432 35689999999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCCcccccccCCCCcccccCcccccCCC--CCcchhHHHHHHHHHHHHhCCCCCCCCCCcccccccHHHHHHHHhc
Q 006982 456 LMNPIDTHLSTFVNGEFGDLGYVAPEYARTLV--ATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSS 533 (623)
Q Consensus 456 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~s~k~DV~sfGvil~elltg~~P~~~~~~~~~~~~~l~~~~~~~~~ 533 (623)
........ .......||+.|+|||++.+.. ++.++||||||+++|||++|+.||..... .+.......
T Consensus 158 ~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~--------~~~~~~i~~ 227 (305)
T 2wtk_C 158 ALHPFAAD--DTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNI--------YKLFENIGK 227 (305)
T ss_dssp ECCTTCSS--CEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSSH--------HHHHHHHHH
T ss_pred ccCccccc--cccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCchH--------HHHHHHHhc
Confidence 76532221 1123345899999999987643 47899999999999999999999975321 111111111
Q ss_pred cCchhhhhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHH
Q 006982 534 TGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQF 582 (623)
Q Consensus 534 ~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~ 582 (623)
.. . .+ .....+++. .++..|+. .||++|||+.|+++.
T Consensus 228 ~~-~------~~-~~~~~~~l~---~li~~~l~-~dp~~Rps~~~ll~~ 264 (305)
T 2wtk_C 228 GS-Y------AI-PGDCGPPLS---DLLKGMLE-YEPAKRFSIRQIRQH 264 (305)
T ss_dssp CC-C------CC-CSSSCHHHH---HHHHHHTC-SSTTTSCCHHHHHHS
T ss_pred CC-C------CC-CCccCHHHH---HHHHHHcc-CChhhCCCHHHHhcC
Confidence 10 0 00 111233444 44456666 999999999999875
No 208
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=100.00 E-value=1.4e-36 Score=312.46 Aligned_cols=250 Identities=21% Similarity=0.354 Sum_probs=193.2
Q ss_pred hccCcccceeeccCccEEEEEEeC-CCcEEEEEEeccccccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEEecC
Q 006982 304 TNSFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKHM 382 (623)
Q Consensus 304 ~~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~ 382 (623)
.++|...+.||+|+||.||+|... +++.||+|.+.... ....+.+|++++.+++||||+++++++...+..++||||+
T Consensus 28 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 106 (314)
T 3com_A 28 EEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES-DLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVMEYC 106 (314)
T ss_dssp --CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTS-CCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred hhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchH-HHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEeecC
Confidence 467889999999999999999975 58999999987543 3467889999999999999999999999999999999999
Q ss_pred CCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCCCCC
Q 006982 383 PNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDT 462 (623)
Q Consensus 383 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~~~~ 462 (623)
++|+|.+++... ...+++..++.++.|++.||.|||+. +++||||||+||+++.++.+||+|||++........
T Consensus 107 ~~~~L~~~~~~~---~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~ 180 (314)
T 3com_A 107 GAGSVSDIIRLR---NKTLTEDEIATILQSTLKGLEYLHFM---RKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDTMA 180 (314)
T ss_dssp TTEEHHHHHHHH---TCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECBTTBS
T ss_pred CCCCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHhC---CCcCCCcCHHHEEECCCCCEEEeecccchhhhhhcc
Confidence 999999998522 35689999999999999999999999 999999999999999999999999999987643221
Q ss_pred cccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCcccccccHHHHHHHHhccCchhhhhc
Q 006982 463 HLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAID 542 (623)
Q Consensus 463 ~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d 542 (623)
. .....||+.|+|||.+.+..++.++||||||+++|||++|+.||...... ......... .......
T Consensus 181 ~----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~--------~~~~~~~~~-~~~~~~~ 247 (314)
T 3com_A 181 K----RNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPM--------RAIFMIPTN-PPPTFRK 247 (314)
T ss_dssp C----BCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHH--------HHHHHHHHS-CCCCCSS
T ss_pred c----cCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCChH--------HHHHHHhcC-CCcccCC
Confidence 1 12335899999999999989999999999999999999999999743211 101110000 0000000
Q ss_pred hhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHH
Q 006982 543 KCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQ 581 (623)
Q Consensus 543 ~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~ 581 (623)
....+++ +..++..|+. .||.+|||+.++++
T Consensus 248 ----~~~~~~~---l~~li~~~l~-~dp~~Rpt~~~ll~ 278 (314)
T 3com_A 248 ----PELWSDN---FTDFVKQCLV-KSPEQRATATQLLQ 278 (314)
T ss_dssp ----GGGSCHH---HHHHHHHHTC-SCTTTSCCHHHHTT
T ss_pred ----cccCCHH---HHHHHHHHcc-CChhhCcCHHHHHh
Confidence 0112233 3444556776 99999999999976
No 209
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=100.00 E-value=3.3e-37 Score=323.49 Aligned_cols=208 Identities=21% Similarity=0.258 Sum_probs=161.9
Q ss_pred HHHHHHhccCcccceeeccCccEEEEEEeC-CCcEEEEEEeccccccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCe--
Q 006982 298 SDLMKATNSFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKE-- 374 (623)
Q Consensus 298 ~~l~~~~~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~-- 374 (623)
.......++|...+.||+|+||.||+|... ++..||+|++.........+.++++.+..++||||+++++++.....
T Consensus 16 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~ 95 (360)
T 3e3p_A 16 ERSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGERD 95 (360)
T ss_dssp HHHHHHHTTEEEC----------CEEEEETTTCCEEEEEEEECCTTCCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSSC
T ss_pred hhchhhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCccccHHHHHHHHHHHhcCCCCcccHHHhhhcccccc
Confidence 455677789999999999999999999974 68999999987655545567788888888999999999999976443
Q ss_pred -----eeEEEecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHH--hcCCCCcEecCCCCCceeeCC-CCCe
Q 006982 375 -----RLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLH--HNCNPRIIHRNISSKCILLDD-DFEP 446 (623)
Q Consensus 375 -----~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH--~~~~~~i~H~dlk~~NILl~~-~~~~ 446 (623)
.++||||+++ +|.+.+.........+++..+..++.|++.||.||| +. +|+||||||+|||++. ++.+
T Consensus 96 ~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~---~ivH~Dlkp~NIll~~~~~~~ 171 (360)
T 3e3p_A 96 RRDIYLNVVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSV---NVCHRDIKPHNVLVNEADGTL 171 (360)
T ss_dssp TTCEEEEEEEECCSC-BHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTTT---CCBCSCCCGGGEEEETTTTEE
T ss_pred ccceeEEEEeecccc-cHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCCC---CeecCcCCHHHEEEeCCCCcE
Confidence 6899999987 554443321123456889999999999999999999 77 9999999999999996 8999
Q ss_pred EEeecccccccCCCCCcccccccCCCCcccccCcccccCC-CCCcchhHHHHHHHHHHHHhCCCCCCCC
Q 006982 447 KISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTL-VATPKGDVYSFGTVLLELVTGERPTNVA 514 (623)
Q Consensus 447 kl~Dfgla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~k~DV~sfGvil~elltg~~P~~~~ 514 (623)
||+|||+++........ ....||+.|+|||++.+. .++.++|||||||++|||++|+.||...
T Consensus 172 kl~Dfg~a~~~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~ 235 (360)
T 3e3p_A 172 KLCDFGSAKKLSPSEPN-----VAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGD 235 (360)
T ss_dssp EECCCTTCBCCCTTSCC-----CSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred EEeeCCCceecCCCCCc-----ccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCC
Confidence 99999999876543221 223479999999998654 4899999999999999999999999764
No 210
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=100.00 E-value=3.4e-37 Score=317.71 Aligned_cols=260 Identities=23% Similarity=0.386 Sum_probs=193.4
Q ss_pred hccCcccceeeccCccEEEEEEeCCCcEEEEEEecccc---ccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEEe
Q 006982 304 TNSFSKNNIIGSGRTGTMYKALLEDGTSLMVKRLQDSQ---RSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYK 380 (623)
Q Consensus 304 ~~~f~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e 380 (623)
.++|...+.||+|+||.||+|...+ .+++|++.... ...+.+.+|+.++.+++||||+++++++.+.+..++|+|
T Consensus 32 ~~~~~~~~~lg~G~~g~V~~~~~~~--~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~iv~e 109 (319)
T 2y4i_B 32 FEQLEIGELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAIITS 109 (319)
T ss_dssp CSCEECCCBCCCSSSSEEEEEEESS--SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSSCEEEECB
T ss_pred HHHeEEeeEeccCCceEEEEEEEcC--eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCceEEEee
Confidence 4678889999999999999999864 48999886432 233567789999999999999999999999999999999
Q ss_pred cCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCCC
Q 006982 381 HMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPI 460 (623)
Q Consensus 381 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~~ 460 (623)
|+++++|.+++... ...+++..++.++.|++.||+|||+. +|+||||||+||+++ ++.+||+|||+++.....
T Consensus 110 ~~~~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~~~~~ 182 (319)
T 2y4i_B 110 LCKGRTLYSVVRDA---KIVLDVNKTRQIAQEIVKGMGYLHAK---GILHKDLKSKNVFYD-NGKVVITDFGLFSISGVL 182 (319)
T ss_dssp CCCSEEHHHHTTSS---CCCCCSHHHHHHHHHHHHHHHHHHHT---TCCCCCCCSTTEEEC---CCEECCCSCCC-----
T ss_pred cccCCcHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHhC---CccccCCChhhEEEe-CCCEEEeecCCccccccc
Confidence 99999999999642 24689999999999999999999999 999999999999998 679999999998765321
Q ss_pred CCc-ccccccCCCCcccccCcccccC---------CCCCcchhHHHHHHHHHHHHhCCCCCCCCCCcccccccHHHHHHH
Q 006982 461 DTH-LSTFVNGEFGDLGYVAPEYART---------LVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQ 530 (623)
Q Consensus 461 ~~~-~~~~~~~~~gt~~y~aPE~~~~---------~~~s~k~DV~sfGvil~elltg~~P~~~~~~~~~~~~~l~~~~~~ 530 (623)
... .........||+.|+|||.+.. ..++.++||||||+++|||++|+.||...... .....
T Consensus 183 ~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~--------~~~~~ 254 (319)
T 2y4i_B 183 QAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAE--------AIIWQ 254 (319)
T ss_dssp -----CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCHH--------HHHHH
T ss_pred cccccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH--------HHHHH
Confidence 111 1111223458899999999864 45788999999999999999999999753211 11111
Q ss_pred HhccCchhhhhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHhhccc
Q 006982 531 LSSTGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAIGERY 590 (623)
Q Consensus 531 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~L~~i~~~~ 590 (623)
.... ..+.+.....++++ ..++..|+. .||++|||+.+++++|+++.++.
T Consensus 255 ~~~~------~~~~~~~~~~~~~l---~~li~~~l~-~~p~~Rpt~~~l~~~l~~l~~~~ 304 (319)
T 2y4i_B 255 MGTG------MKPNLSQIGMGKEI---SDILLFCWA-FEQEERPTFTKLMDMLEKLPKRN 304 (319)
T ss_dssp HHTT------CCCCCCCSSCCTTH---HHHHHHHHC-SSTTTSCCHHHHHHHHTTC----
T ss_pred hccC------CCCCCCcCCCCHHH---HHHHHHHhc-CChhhCcCHHHHHHHHHHHHHhh
Confidence 1110 01111111122333 344456766 99999999999999999987765
No 211
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=100.00 E-value=4.5e-37 Score=346.35 Aligned_cols=258 Identities=21% Similarity=0.340 Sum_probs=199.0
Q ss_pred HhccCcccceeeccCccEEEEEEeCC----CcEEEEEEecccc--ccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeee
Q 006982 303 ATNSFSKNNIIGSGRTGTMYKALLED----GTSLMVKRLQDSQ--RSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERL 376 (623)
Q Consensus 303 ~~~~f~~~~~lG~G~~g~Vy~~~~~~----~~~vavK~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 376 (623)
..++|...+.||+|+||.||+|.+.. +..||+|++.... ...+.+.+|+.++.+++||||+++++++. .+..+
T Consensus 388 ~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~~~~~ 466 (656)
T 2j0j_A 388 QRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVW 466 (656)
T ss_dssp CGGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCE
T ss_pred ccccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe-cCceE
Confidence 34678888999999999999998642 4679999986533 33467899999999999999999999984 45689
Q ss_pred EEEecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccc
Q 006982 377 LVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARL 456 (623)
Q Consensus 377 lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~ 456 (623)
+||||+++|+|.+++... ...+++..++.++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.
T Consensus 467 lv~E~~~~g~L~~~l~~~---~~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDikp~NILl~~~~~vkL~DFG~a~~ 540 (656)
T 2j0j_A 467 IIMELCTLGELRSFLQVR---KFSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRY 540 (656)
T ss_dssp EEEECCTTCBHHHHHHHT---TTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCCCCCS
T ss_pred EEEEcCCCCcHHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHhC---CccccccchHhEEEeCCCCEEEEecCCCee
Confidence 999999999999999643 24689999999999999999999999 999999999999999999999999999987
Q ss_pred cCCCCCcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCcccccccHHHHHHHHhccC
Q 006982 457 MNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVT-GERPTNVAKAPETFKGNLVEWIAQLSSTG 535 (623)
Q Consensus 457 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~ellt-g~~P~~~~~~~~~~~~~l~~~~~~~~~~~ 535 (623)
........ .....+|+.|+|||++.+..++.++||||||+++|||++ |..||...... .....+.. ..
T Consensus 541 ~~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~-----~~~~~i~~---~~ 609 (656)
T 2j0j_A 541 MEDSTYYK---ASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN-----DVIGRIEN---GE 609 (656)
T ss_dssp CCC-------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH-----HHHHHHHH---TC
T ss_pred cCCCccee---ccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCHH-----HHHHHHHc---CC
Confidence 65422211 112346789999999998899999999999999999997 99998753221 11111111 10
Q ss_pred chhhhhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHhhcc
Q 006982 536 QLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAIGER 589 (623)
Q Consensus 536 ~~~~~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~L~~i~~~ 589 (623)
.. . .....++++ ..++..|+. .||++|||+.|+++.|+++.++
T Consensus 610 ~~-~------~~~~~~~~l---~~li~~~l~-~dP~~RPs~~el~~~L~~il~~ 652 (656)
T 2j0j_A 610 RL-P------MPPNCPPTL---YSLMTKCWA-YDPSRRPRFTELKAQLSTILEE 652 (656)
T ss_dssp CC-C------CCTTCCHHH---HHHHHHHTC-SSGGGSCCHHHHHHHHHHHHHH
T ss_pred CC-C------CCccccHHH---HHHHHHHcC-CChhHCcCHHHHHHHHHHHHHH
Confidence 00 0 011123333 445556777 9999999999999999998653
No 212
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=100.00 E-value=2.5e-36 Score=330.64 Aligned_cols=250 Identities=21% Similarity=0.312 Sum_probs=191.6
Q ss_pred hccCcccceeeccCccEEEEEEeC-CCcEEEEEEecccc---ccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEE
Q 006982 304 TNSFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQ---RSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVY 379 (623)
Q Consensus 304 ~~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 379 (623)
.+.|...+.||+|+||.||+|... ++..||+|++.... .....+.+|++++++++||||+++++++.+....++||
T Consensus 36 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 115 (494)
T 3lij_A 36 SEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVM 115 (494)
T ss_dssp HHHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hcCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 346888999999999999999965 68899999986542 33567899999999999999999999999999999999
Q ss_pred ecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCC---CCCeEEeecccccc
Q 006982 380 KHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDD---DFEPKISDFGLARL 456 (623)
Q Consensus 380 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~---~~~~kl~Dfgla~~ 456 (623)
||+++|+|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+|||++. ++.+||+|||+++.
T Consensus 116 e~~~~g~L~~~~~~----~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~ 188 (494)
T 3lij_A 116 ECYKGGELFDEIIH----RMKFNEVDAAVIIKQVLSGVTYLHKH---NIVHRDLKPENLLLESKEKDALIKIVDFGLSAV 188 (494)
T ss_dssp ECCCSCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSTTCCEEECCCTTCEE
T ss_pred ecCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCChhhEEEeCCCCCCcEEEEECCCCeE
Confidence 99999999998853 24689999999999999999999999 9999999999999976 45599999999987
Q ss_pred cCCCCCcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCcccccccHHHHHHHHhccCc
Q 006982 457 MNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQ 536 (623)
Q Consensus 457 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~ 536 (623)
...... .....||+.|+|||++. ..++.++||||+||++|||++|+.||...... +..........
T Consensus 189 ~~~~~~-----~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~--------~~~~~i~~~~~ 254 (494)
T 3lij_A 189 FENQKK-----MKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPFGGQTDQ--------EILRKVEKGKY 254 (494)
T ss_dssp CBTTBC-----BCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--------HHHHHHHHTCC
T ss_pred CCCCcc-----ccccCCCcCeeCHHHHc-ccCCCchhHHHHHHHHHHHHhCCCCCCCCCHH--------HHHHHHHhCCC
Confidence 643221 22345899999999986 46899999999999999999999999753221 11111111100
Q ss_pred hhhhhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHH
Q 006982 537 LQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQF 582 (623)
Q Consensus 537 ~~~~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~ 582 (623)
....+.+ ...++++..+ +..|+. .||++|||+.|+++.
T Consensus 255 --~~~~~~~--~~~s~~~~~l---i~~~L~-~dp~~R~s~~e~l~h 292 (494)
T 3lij_A 255 --TFDSPEW--KNVSEGAKDL---IKQMLQ-FDSQRRISAQQALEH 292 (494)
T ss_dssp --CCCSGGG--TTSCHHHHHH---HHHHTC-SSTTTSCCHHHHHTC
T ss_pred --CCCchhc--ccCCHHHHHH---HHHHCC-CChhhCccHHHHhcC
Confidence 0000111 1223444444 445665 999999999999864
No 213
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=100.00 E-value=1.9e-36 Score=312.91 Aligned_cols=250 Identities=21% Similarity=0.299 Sum_probs=190.3
Q ss_pred hccCcccceeeccCccEEEEEEeC-CCcEEEEEEecccc---------ccHHHHHHHHHHhCCCCCCCCcceeEEEEeCC
Q 006982 304 TNSFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQ---------RSEKEFVAEMATLGSVKNRNLVPLLGFCMAKK 373 (623)
Q Consensus 304 ~~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---------~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~ 373 (623)
.++|...+.||+|+||.||+|... +++.||+|++.... .....+.+|++++.+++||||+++++++....
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~ 88 (322)
T 2ycf_A 9 RDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAED 88 (322)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESSS
T ss_pred hhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCCc
Confidence 457899999999999999999965 57899999986532 12235789999999999999999999987654
Q ss_pred eeeEEEecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCC---eEEee
Q 006982 374 ERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFE---PKISD 450 (623)
Q Consensus 374 ~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~---~kl~D 450 (623)
.++||||+++|+|.+++.. ...+++..+..++.|++.||.|||+. +|+||||||+||+++.++. +||+|
T Consensus 89 -~~lv~e~~~~~~L~~~~~~----~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~~~~kl~D 160 (322)
T 2ycf_A 89 -YYIVLELMEGGELFDKVVG----NKRLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITD 160 (322)
T ss_dssp -EEEEEECCTTEETHHHHST----TCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSSSCCEEECC
T ss_pred -eEEEEecCCCCcHHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEecCCCCCeEEEcc
Confidence 8999999999999999863 35689999999999999999999999 9999999999999987665 99999
Q ss_pred cccccccCCCCCcccccccCCCCcccccCccccc---CCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCcccccccHHHH
Q 006982 451 FGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYAR---TLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEW 527 (623)
Q Consensus 451 fgla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~s~k~DV~sfGvil~elltg~~P~~~~~~~~~~~~~l~~~ 527 (623)
||+++....... .....||+.|+|||++. ...++.++||||||+++|||++|+.||....... .+...
T Consensus 161 fg~~~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~----~~~~~ 231 (322)
T 2ycf_A 161 FGHSKILGETSL-----MRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQV----SLKDQ 231 (322)
T ss_dssp CTTCEECCCCHH-----HHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSS----CHHHH
T ss_pred Cccceecccccc-----cccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHH----HHHHH
Confidence 999987643211 11223789999999873 5678899999999999999999999997543321 22222
Q ss_pred HHHHhccCchhhhhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHH
Q 006982 528 IAQLSSTGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQ 581 (623)
Q Consensus 528 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~ 581 (623)
+...... ...+ .. ....++ +.+++..|+. .||++||++.|+++
T Consensus 232 ~~~~~~~-~~~~-----~~-~~~~~~---~~~li~~~l~-~dP~~Rps~~~~l~ 274 (322)
T 2ycf_A 232 ITSGKYN-FIPE-----VW-AEVSEK---ALDLVKKLLV-VDPKARFTTEEALR 274 (322)
T ss_dssp HHHTCCC-CCHH-----HH-TTSCHH---HHHHHHHHSC-SSTTTSCCHHHHHT
T ss_pred HHhCccc-cCch-----hh-hhcCHH---HHHHHHHHcc-cCHhhCCCHHHHhh
Confidence 2111000 0000 00 112233 3445556776 99999999999884
No 214
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=100.00 E-value=6.6e-37 Score=313.05 Aligned_cols=251 Identities=18% Similarity=0.307 Sum_probs=191.5
Q ss_pred hccCcccceeeccCccEEEEEEeC-CCcEEEEEEecccc-ccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEEec
Q 006982 304 TNSFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQ-RSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKH 381 (623)
Q Consensus 304 ~~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 381 (623)
.+.|...+.||+|+||.||+|... ++..|++|++.... ...+.+.+|++++.+++||||+++++++...+..++|+||
T Consensus 18 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 97 (302)
T 2j7t_A 18 NEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEF 97 (302)
T ss_dssp GGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEEEEC
T ss_pred ccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEEEEe
Confidence 357888999999999999999976 58899999986543 4567889999999999999999999999999999999999
Q ss_pred CCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCCCC
Q 006982 382 MPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPID 461 (623)
Q Consensus 382 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~~~ 461 (623)
+++++|.+++... ...+++..+..++.|++.||.|||+. +++||||||+||+++.++.+||+|||++.......
T Consensus 98 ~~~~~l~~~~~~~---~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 171 (302)
T 2j7t_A 98 CPGGAVDAIMLEL---DRGLTEPQIQVVCRQMLEALNFLHSK---RIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTL 171 (302)
T ss_dssp CTTEEHHHHHHHH---TSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTSCEEECCCHHHHHHHHHH
T ss_pred CCCCcHHHHHHhh---ccCCCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHHHEEECCCCCEEEEECCCCccccccc
Confidence 9999999998532 24589999999999999999999999 99999999999999999999999999976432110
Q ss_pred CcccccccCCCCcccccCcccc-----cCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCcccccccHHHHHHHHhccCc
Q 006982 462 THLSTFVNGEFGDLGYVAPEYA-----RTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQ 536 (623)
Q Consensus 462 ~~~~~~~~~~~gt~~y~aPE~~-----~~~~~s~k~DV~sfGvil~elltg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~ 536 (623)
.......||+.|+|||++ ....++.++||||||+++|||++|+.||..... ............
T Consensus 172 ----~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~--------~~~~~~~~~~~~ 239 (302)
T 2j7t_A 172 ----QKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNP--------MRVLLKIAKSDP 239 (302)
T ss_dssp ----HC-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCH--------HHHHHHHHHSCC
T ss_pred ----cccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCH--------HHHHHHHhccCC
Confidence 111223489999999998 466789999999999999999999999975321 111111111100
Q ss_pred hhhhhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHH
Q 006982 537 LQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQ 581 (623)
Q Consensus 537 ~~~~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~ 581 (623)
. .. ......+.++ ..++..|+. .||++|||+.|+++
T Consensus 240 ~-~~----~~~~~~~~~l---~~li~~~l~-~dp~~Rps~~~ll~ 275 (302)
T 2j7t_A 240 P-TL----LTPSKWSVEF---RDFLKIALD-KNPETRPSAAQLLE 275 (302)
T ss_dssp C-CC----SSGGGSCHHH---HHHHHHHSC-SCTTTSCCHHHHTT
T ss_pred c-cc----CCccccCHHH---HHHHHHHcc-cChhhCCCHHHHhc
Confidence 0 00 0011122333 344456766 99999999999865
No 215
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=100.00 E-value=2.6e-36 Score=313.33 Aligned_cols=197 Identities=20% Similarity=0.297 Sum_probs=172.1
Q ss_pred ccCcccceeeccCccEEEEEEe--CCCcEEEEEEeccccccHHHHHHHHHHhCCCCCCC------CcceeEEEEeCCeee
Q 006982 305 NSFSKNNIIGSGRTGTMYKALL--EDGTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRN------LVPLLGFCMAKKERL 376 (623)
Q Consensus 305 ~~f~~~~~lG~G~~g~Vy~~~~--~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~h~n------iv~l~~~~~~~~~~~ 376 (623)
++|...+.||+|+||.||+|.. .++..||+|+++......+.+.+|++++..++|++ ++++++++.+.+..+
T Consensus 14 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~~~~~ 93 (339)
T 1z57_A 14 ARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHGHIC 93 (339)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSSHHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEETTEEE
T ss_pred CceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecCCchhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccCCcEE
Confidence 5788899999999999999986 36889999999876656677888999988887654 999999999999999
Q ss_pred EEEecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCC--------------
Q 006982 377 LVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDD-------------- 442 (623)
Q Consensus 377 lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~-------------- 442 (623)
+||||+ +++|.+++.... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.
T Consensus 94 lv~e~~-~~~l~~~l~~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~~~~~~~~ 167 (339)
T 1z57_A 94 IVFELL-GLSTYDFIKENG--FLPFRLDHIRKMAYQICKSVNFLHSN---KLTHTDLKPENILFVQSDYTEAYNPKIKRD 167 (339)
T ss_dssp EEEECC-CCBHHHHHHHTT--TCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESCCCEEEEEC----CE
T ss_pred EEEcCC-CCCHHHHHHhcC--CCCCcHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHEEEeccccccccCCccccc
Confidence 999999 889999986542 24688999999999999999999999 9999999999999987
Q ss_pred -----CCCeEEeecccccccCCCCCcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCC
Q 006982 443 -----DFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVA 514 (623)
Q Consensus 443 -----~~~~kl~Dfgla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~~ 514 (623)
++.+||+|||+++...... ....||+.|+|||++.+..++.++||||||+++|||++|+.||...
T Consensus 168 ~~~~~~~~~kl~Dfg~~~~~~~~~-------~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~ 237 (339)
T 1z57_A 168 ERTLINPDIKVVDFGSATYDDEHH-------STLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTH 237 (339)
T ss_dssp EEEESCCCEEECCCSSCEETTSCC-------CSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred cccccCCCceEeeCcccccCcccc-------ccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCC
Confidence 6789999999998654321 1235899999999999989999999999999999999999999754
No 216
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=100.00 E-value=1e-36 Score=344.41 Aligned_cols=201 Identities=21% Similarity=0.251 Sum_probs=175.7
Q ss_pred HhccCcccceeeccCccEEEEEEeC-CCcEEEEEEeccc----cccHHHHHHHHHHhCCC-CCCCCcceeEEEEeCCeee
Q 006982 303 ATNSFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDS----QRSEKEFVAEMATLGSV-KNRNLVPLLGFCMAKKERL 376 (623)
Q Consensus 303 ~~~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~----~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~ 376 (623)
..++|...++||+|+||.||+|... +++.||+|+++.. ......+..|.+++..+ +||||+++++++.+.+..+
T Consensus 339 ~~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~ 418 (674)
T 3pfq_A 339 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLY 418 (674)
T ss_dssp -CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEE
T ss_pred cccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEE
Confidence 3467999999999999999999965 6888999999753 23445678899999888 7999999999999999999
Q ss_pred EEEecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccc
Q 006982 377 LVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARL 456 (623)
Q Consensus 377 lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~ 456 (623)
+||||+++|+|.++++.. ..+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.
T Consensus 419 lV~E~~~gg~L~~~l~~~----~~~~~~~~~~~~~qi~~aL~~LH~~---gIiHrDLKp~NILl~~~g~ikL~DFGla~~ 491 (674)
T 3pfq_A 419 FVMEYVNGGDLMYHIQQV----GRFKEPHAVFYAAEIAIGLFFLQSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKE 491 (674)
T ss_dssp EEEECCCSCBHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHHHT---SEECCCCCSTTEEECSSSCEEECCCTTCEE
T ss_pred EEEeCcCCCcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHhC---CeEeccCChhhEEEcCCCcEEEeecceeec
Confidence 999999999999999632 4689999999999999999999999 999999999999999999999999999986
Q ss_pred cCCCCCcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCC
Q 006982 457 MNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVA 514 (623)
Q Consensus 457 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~~ 514 (623)
....... .....||+.|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 492 ~~~~~~~----~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~ 545 (674)
T 3pfq_A 492 NIWDGVT----TKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGE 545 (674)
T ss_dssp CCCTTCC----BCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred cccCCcc----cccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCC
Confidence 4332221 22345899999999999999999999999999999999999999753
No 217
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=100.00 E-value=2e-36 Score=309.08 Aligned_cols=254 Identities=21% Similarity=0.317 Sum_probs=187.3
Q ss_pred hccCcccceeeccCccEEEEEEeC-CCcEEEEEEeccccccHHHHHHHHHHhCCCCCCCCcceeEEEEe-----------
Q 006982 304 TNSFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGFCMA----------- 371 (623)
Q Consensus 304 ~~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~----------- 371 (623)
.++|...+.||+|+||.||+|... +++.||+|++.......+.+.+|++++.+++||||+++++++.+
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~ 84 (303)
T 1zy4_A 5 ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTAV 84 (303)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEEHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC-----
T ss_pred cccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEeccHHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhccc
Confidence 467899999999999999999964 78999999997665566788999999999999999999998865
Q ss_pred --CCeeeEEEecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEe
Q 006982 372 --KKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKIS 449 (623)
Q Consensus 372 --~~~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~ 449 (623)
....++||||+++|+|.+++... ...+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+
T Consensus 85 ~~~~~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dlkp~Nil~~~~~~~kl~ 158 (303)
T 1zy4_A 85 KKKSTLFIQMEYCENGTLYDLIHSE---NLNQQRDEYWRLFRQILEALSYIHSQ---GIIHRDLKPMNIFIDESRNVKIG 158 (303)
T ss_dssp -CEEEEEEEEECCCSCBHHHHHHHS---CGGGCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEEC
T ss_pred ccCCceEEEEecCCCCCHHHhhhcc---ccccchHHHHHHHHHHHHHHHHHHhC---CeecccCCHHhEEEcCCCCEEEe
Confidence 34578999999999999999642 34678899999999999999999999 99999999999999999999999
Q ss_pred ecccccccCCCCCc----------ccccccCCCCcccccCcccccCC-CCCcchhHHHHHHHHHHHHhCCCCCCCCCCcc
Q 006982 450 DFGLARLMNPIDTH----------LSTFVNGEFGDLGYVAPEYARTL-VATPKGDVYSFGTVLLELVTGERPTNVAKAPE 518 (623)
Q Consensus 450 Dfgla~~~~~~~~~----------~~~~~~~~~gt~~y~aPE~~~~~-~~s~k~DV~sfGvil~elltg~~P~~~~~~~~ 518 (623)
|||+++........ .........||+.|+|||.+.+. .++.++||||||+++|||++ ||....
T Consensus 159 dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~~~--- 232 (303)
T 1zy4_A 159 DFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGM--- 232 (303)
T ss_dssp CCCCCSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSSHH---
T ss_pred eCcchhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCCch---
Confidence 99999876432100 01112234589999999998754 68999999999999999998 553210
Q ss_pred cccccHHHHHHHHhccCchhhhhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHH
Q 006982 519 TFKGNLVEWIAQLSSTGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQ 581 (623)
Q Consensus 519 ~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~ 581 (623)
............. ..+.+.+. ....++ +.+++..|+. .||++|||+.|+++
T Consensus 233 ----~~~~~~~~~~~~~---~~~~~~~~-~~~~~~---~~~li~~~l~-~dp~~Rps~~~ll~ 283 (303)
T 1zy4_A 233 ----ERVNILKKLRSVS---IEFPPDFD-DNKMKV---EKKIIRLLID-HDPNKRPGARTLLN 283 (303)
T ss_dssp ----HHHHHHHHHHSTT---CCCCTTCC-TTTSHH---HHHHHHHHTC-SSGGGSCCHHHHHH
T ss_pred ----hHHHHHHhccccc---cccCcccc-ccchHH---HHHHHHHHHh-cCcccCcCHHHHhC
Confidence 0111111111100 00000000 112223 3444556666 99999999999976
No 218
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=100.00 E-value=1.9e-37 Score=327.00 Aligned_cols=251 Identities=8% Similarity=-0.013 Sum_probs=174.6
Q ss_pred ccCcccceeeccCccEEEEEEeC-CCcEEEEEEecccc----ccHHHHHHH---HHHhCCCCCCCCccee-------EEE
Q 006982 305 NSFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQ----RSEKEFVAE---MATLGSVKNRNLVPLL-------GFC 369 (623)
Q Consensus 305 ~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~e---~~~l~~l~h~niv~l~-------~~~ 369 (623)
.+|...+.||+|+||.||+|... +++.||+|++.... ...+.+.+| ++.+.. +|||+++++ +++
T Consensus 62 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~-~hp~iv~~~~~~~~p~d~~ 140 (371)
T 3q60_A 62 RKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLG-ESPEEARDRRRLLLPSDAV 140 (371)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC-----------CBCCCCEEE
T ss_pred eeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcc-cChhhhhhceeEEeeehhe
Confidence 45888899999999999999965 78999999997643 234556777 455666 799977754 454
Q ss_pred EeC-----------------CeeeEEEecCCCCCHhhhccCCCCCCCccChHHH------HHHHHHHHHHHHHHHhcCCC
Q 006982 370 MAK-----------------KERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRR------LKIAIGAARGFAWLHHNCNP 426 (623)
Q Consensus 370 ~~~-----------------~~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~------~~i~~~ia~~l~yLH~~~~~ 426 (623)
... ...++||||++ |+|.+++... +..+.+..+ +.++.|++.||+|||+.
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~---~~~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~--- 213 (371)
T 3q60_A 141 AVQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTL---DFVYVFRGDEGILALHILTAQLIRLAANLQSK--- 213 (371)
T ss_dssp EETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHH---HHSCCCCHHHHHHHHHHHHHHHHHHHHHHHHT---
T ss_pred ecCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHh---ccccchhhhhhhhhHHHHHHHHHHHHHHHHHC---
Confidence 433 23789999999 8999999643 234566666 78889999999999999
Q ss_pred CcEecCCCCCceeeCCCCCeEEeecccccccCCCCCcccccccCCCCcccccCcccccC--CCCCcchhHHHHHHHHHHH
Q 006982 427 RIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYART--LVATPKGDVYSFGTVLLEL 504 (623)
Q Consensus 427 ~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~s~k~DV~sfGvil~el 504 (623)
+|+||||||+|||++.++.+||+|||+++...... . ...+|+.|+|||++.+ ..++.++|||||||++|||
T Consensus 214 ~ivHrDikp~NIll~~~~~~kL~DFG~a~~~~~~~---~----~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~el 286 (371)
T 3q60_A 214 GLVHGHFTPDNLFIMPDGRLMLGDVSALWKVGTRG---P----ASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRV 286 (371)
T ss_dssp TEEETTCSGGGEEECTTSCEEECCGGGEEETTCEE---E----GGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHH
T ss_pred CCccCcCCHHHEEECCCCCEEEEecceeeecCCCc---c----CccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHH
Confidence 99999999999999999999999999998764311 0 2236799999999987 6789999999999999999
Q ss_pred HhCCCCCCCCCCcccccccHHHHHHHHhccCchhhhhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHH
Q 006982 505 VTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQ 581 (623)
Q Consensus 505 ltg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~ 581 (623)
++|+.||............ ..............+. ....++++..+ +..|+. .||++|||+.|+++
T Consensus 287 ltg~~Pf~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~--~~~~~~~~~~l---i~~~L~-~dP~~Rpt~~e~l~ 352 (371)
T 3q60_A 287 WCLFLPFGLVTPGIKGSWK-----RPSLRVPGTDSLAFGS--CTPLPDFVKTL---IGRFLN-FDRRRRLLPLEAME 352 (371)
T ss_dssp HHSSCSTTBCCTTCTTCCC-----BCCTTSCCCCSCCCTT--SSCCCHHHHHH---HHHHTC-SSTTTCCCHHHHTT
T ss_pred HhCCCCCCCcCcccccchh-----hhhhhhccccccchhh--ccCCCHHHHHH---HHHHcC-CChhhCCCHHHHhc
Confidence 9999999765332110000 0000000000000000 01234444444 445666 99999999999975
No 219
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=100.00 E-value=1.6e-36 Score=326.27 Aligned_cols=201 Identities=22% Similarity=0.301 Sum_probs=166.3
Q ss_pred hccCcccceeeccCccEEEEEEeC-CCcEEEEEEecccc---ccHHHHHHHHHHhCCCCCCCCcceeEEEEeC-----Ce
Q 006982 304 TNSFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQ---RSEKEFVAEMATLGSVKNRNLVPLLGFCMAK-----KE 374 (623)
Q Consensus 304 ~~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~-----~~ 374 (623)
.++|...+.||+|+||.||+|... +++.||+|++.... ...+.+.+|++++++++||||+++++++... ..
T Consensus 25 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~ 104 (432)
T 3n9x_A 25 PDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDE 104 (432)
T ss_dssp CTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred cCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCe
Confidence 357889999999999999999965 68889999997542 3346788999999999999999999999776 56
Q ss_pred eeEEEecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccc
Q 006982 375 RLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLA 454 (623)
Q Consensus 375 ~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla 454 (623)
.++||||++ |+|.+++.. ...+++..+..++.|+++||+|||+. +|+||||||+|||++.++.+||+|||++
T Consensus 105 ~~lv~e~~~-~~L~~~~~~----~~~l~~~~~~~i~~qil~aL~~LH~~---givHrDlkp~NILl~~~~~~kL~DFGla 176 (432)
T 3n9x_A 105 LYIVLEIAD-SDLKKLFKT----PIFLTEEHIKTILYNLLLGENFIHES---GIIHRDLKPANCLLNQDCSVKVCDFGLA 176 (432)
T ss_dssp EEEEEECCS-EEHHHHHHS----SCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTC
T ss_pred EEEEEecCC-cCHHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHHHC---CCCCCCCCHHHeEECCCCCEEEccCCCc
Confidence 899999986 599999963 35689999999999999999999999 9999999999999999999999999999
Q ss_pred cccCCCCCcc------------------cccccCCCCcccccCcccc-cCCCCCcchhHHHHHHHHHHHHhCCCCCC
Q 006982 455 RLMNPIDTHL------------------STFVNGEFGDLGYVAPEYA-RTLVATPKGDVYSFGTVLLELVTGERPTN 512 (623)
Q Consensus 455 ~~~~~~~~~~------------------~~~~~~~~gt~~y~aPE~~-~~~~~s~k~DV~sfGvil~elltg~~P~~ 512 (623)
+......... ........||+.|+|||++ ....++.++||||+||++|||++|..||.
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~ 253 (432)
T 3n9x_A 177 RTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHI 253 (432)
T ss_dssp EEC-------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTTC
T ss_pred ccccccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhcccccc
Confidence 9765322110 0112345689999999986 56679999999999999999998666554
No 220
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=100.00 E-value=2.4e-37 Score=328.67 Aligned_cols=198 Identities=23% Similarity=0.296 Sum_probs=163.2
Q ss_pred ccCcccceeeccCccEEEEEEeCCCcEEEEEEeccccccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCe------eeEE
Q 006982 305 NSFSKNNIIGSGRTGTMYKALLEDGTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKE------RLLV 378 (623)
Q Consensus 305 ~~f~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~------~~lV 378 (623)
.+|...+.||+|+||.||+|+..++..+|+|++...... ..+|++++++++||||+++++++..... .++|
T Consensus 40 ~~Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~~---~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~lv 116 (394)
T 4e7w_A 40 IAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKRF---KNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNLV 116 (394)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTEEEEEEEEECCTTS---CCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEEEE
T ss_pred ceEEEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCcch---HHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEEEE
Confidence 468889999999999999999887777999988543321 2369999999999999999999965443 6799
Q ss_pred EecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeC-CCCCeEEeeccccccc
Q 006982 379 YKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLD-DDFEPKISDFGLARLM 457 (623)
Q Consensus 379 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~-~~~~~kl~Dfgla~~~ 457 (623)
|||++++.+....+. ......+++..+..++.|+++||+|||+. +|+||||||+|||++ .++.+||+|||+++..
T Consensus 117 ~e~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~~kL~DFG~a~~~ 192 (394)
T 4e7w_A 117 LEYVPETVYRASRHY-AKLKQTMPMLLIKLYMYQLLRSLAYIHSI---GICHRDIKPQNLLLDPPSGVLKLIDFGSAKIL 192 (394)
T ss_dssp EECCSEEHHHHHHHH-HHTTSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEETTTTEEEECCCTTCEEC
T ss_pred eeccCccHHHHHHHH-HhhcCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHEEEcCCCCcEEEeeCCCcccc
Confidence 999987544433221 11235789999999999999999999999 999999999999999 8999999999999876
Q ss_pred CCCCCcccccccCCCCcccccCcccccCC-CCCcchhHHHHHHHHHHHHhCCCCCCCC
Q 006982 458 NPIDTHLSTFVNGEFGDLGYVAPEYARTL-VATPKGDVYSFGTVLLELVTGERPTNVA 514 (623)
Q Consensus 458 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~k~DV~sfGvil~elltg~~P~~~~ 514 (623)
...... ....||+.|+|||++.+. .++.++|||||||++|||++|+.||...
T Consensus 193 ~~~~~~-----~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~ 245 (394)
T 4e7w_A 193 IAGEPN-----VSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGE 245 (394)
T ss_dssp CTTCCC-----CSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred cCCCCC-----cccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 443222 123479999999998764 5899999999999999999999999764
No 221
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=100.00 E-value=1.9e-37 Score=332.29 Aligned_cols=198 Identities=25% Similarity=0.313 Sum_probs=163.0
Q ss_pred ccCcccceeeccCccEEEEEEeC-CCcEEEEEEeccccccHHHHHHHHHHhCCCCCCCCcceeEEEEeC----C--eeeE
Q 006982 305 NSFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGFCMAK----K--ERLL 377 (623)
Q Consensus 305 ~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~----~--~~~l 377 (623)
.+|...+.||+|+||.||+|+.. +++.||+|++..... ...+|++++++++||||+++++++... + ..++
T Consensus 54 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~~---~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~~l 130 (420)
T 1j1b_A 54 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR---FKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNL 130 (420)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCTT---SCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEEEE
T ss_pred ceEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccch---hHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeEEe
Confidence 45888899999999999999975 689999999865432 234799999999999999999998642 1 2568
Q ss_pred EEecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCC-CCeEEeecccccc
Q 006982 378 VYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDD-FEPKISDFGLARL 456 (623)
Q Consensus 378 V~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~-~~~kl~Dfgla~~ 456 (623)
||||+++ ++.+.+.........+++..+..++.|+++||+|||+. +|+||||||+|||++.+ +.+||+|||+++.
T Consensus 131 v~e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NILl~~~~~~~kl~DFG~a~~ 206 (420)
T 1j1b_A 131 VLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQ 206 (420)
T ss_dssp EEECCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCSGGGEEEETTTTEEEECCCTTCEE
T ss_pred ehhcccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChhhEEEeCCCCeEEeccchhhhh
Confidence 9999986 66666543222346789999999999999999999999 99999999999999955 6789999999987
Q ss_pred cCCCCCcccccccCCCCcccccCcccccCC-CCCcchhHHHHHHHHHHHHhCCCCCCCC
Q 006982 457 MNPIDTHLSTFVNGEFGDLGYVAPEYARTL-VATPKGDVYSFGTVLLELVTGERPTNVA 514 (623)
Q Consensus 457 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~k~DV~sfGvil~elltg~~P~~~~ 514 (623)
....... ....||+.|+|||++.+. .++.++|||||||++|||++|+.||...
T Consensus 207 ~~~~~~~-----~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~ 260 (420)
T 1j1b_A 207 LVRGEPN-----VSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD 260 (420)
T ss_dssp CCTTCCC-----CSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred cccCCCc-----eeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCC
Confidence 6543221 123589999999998764 7899999999999999999999999764
No 222
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=100.00 E-value=9.4e-37 Score=313.82 Aligned_cols=249 Identities=22% Similarity=0.325 Sum_probs=189.8
Q ss_pred hccCcccceeeccCccEEEEEEeCCCcEEEEEEecccc---ccHHHHHHHHHHhCCCC--CCCCcceeEEEEeCCeeeEE
Q 006982 304 TNSFSKNNIIGSGRTGTMYKALLEDGTSLMVKRLQDSQ---RSEKEFVAEMATLGSVK--NRNLVPLLGFCMAKKERLLV 378 (623)
Q Consensus 304 ~~~f~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~---~~~~~~~~e~~~l~~l~--h~niv~l~~~~~~~~~~~lV 378 (623)
.++|...+.||+|+||.||++...+++.||+|++.... ...+.+.+|++++.+++ ||||+++++++.+.+..++|
T Consensus 27 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv 106 (313)
T 3cek_A 27 GRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMV 106 (313)
T ss_dssp TEEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECSSEEEEE
T ss_pred cceEEEEEEecCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEeecCCEEEEE
Confidence 46788899999999999999999889999999986533 33467889999999997 59999999999999999999
Q ss_pred EecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccC
Q 006982 379 YKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMN 458 (623)
Q Consensus 379 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~ 458 (623)
|| +.+++|.+++.. ...+++..++.++.|++.||.|||+. +|+||||||+||++++ +.+||+|||+++...
T Consensus 107 ~e-~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~-~~~kL~Dfg~~~~~~ 177 (313)
T 3cek_A 107 ME-CGNIDLNSWLKK----KKSIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIVD-GMLKLIDFGIANQMQ 177 (313)
T ss_dssp EC-CCSEEHHHHHHH----CSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEET-TEEEECCCSSSCC--
T ss_pred Ee-cCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcccEEEEC-CeEEEeecccccccc
Confidence 99 668899999963 24689999999999999999999999 9999999999999975 899999999998764
Q ss_pred CCCCcccccccCCCCcccccCcccccC-----------CCCCcchhHHHHHHHHHHHHhCCCCCCCCCCcccccccHHHH
Q 006982 459 PIDTHLSTFVNGEFGDLGYVAPEYART-----------LVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEW 527 (623)
Q Consensus 459 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-----------~~~s~k~DV~sfGvil~elltg~~P~~~~~~~~~~~~~l~~~ 527 (623)
..... .......||+.|+|||.+.+ ..++.++||||||+++|||++|+.||...... ...
T Consensus 178 ~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~-------~~~ 248 (313)
T 3cek_A 178 PDTTS--VVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQ-------ISK 248 (313)
T ss_dssp --------------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCSH-------HHH
T ss_pred Ccccc--ccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHHH-------HHH
Confidence 42211 11223458999999999865 46788999999999999999999999643221 111
Q ss_pred HHHHhccCchhhhhchhhh---cCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHH
Q 006982 528 IAQLSSTGQLQDAIDKCLV---AKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFL 583 (623)
Q Consensus 528 ~~~~~~~~~~~~~~d~~l~---~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~L 583 (623)
.... ++.... ....++++. .++..|+. .||++||++.|+++.-
T Consensus 249 ~~~~---------~~~~~~~~~~~~~~~~l~---~li~~~l~-~dp~~Rps~~ell~h~ 294 (313)
T 3cek_A 249 LHAI---------IDPNHEIEFPDIPEKDLQ---DVLKCCLK-RDPKQRISIPELLAHP 294 (313)
T ss_dssp HHHH---------HCTTSCCCCCCCSCHHHH---HHHHHHTC-SSTTTSCCHHHHHTSH
T ss_pred HHHH---------HhcccccCCcccchHHHH---HHHHHHcc-CCcccCcCHHHHhcCc
Confidence 1111 111111 111233344 44456776 9999999999998743
No 223
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=100.00 E-value=9.5e-37 Score=328.26 Aligned_cols=254 Identities=21% Similarity=0.280 Sum_probs=181.3
Q ss_pred CcccceeeccCccEEEEEEeCCCcEEEEEEeccccccHHHHHHHHHHhCCC-CCCCCcceeEEEEeCCeeeEEEecCCCC
Q 006982 307 FSKNNIIGSGRTGTMYKALLEDGTSLMVKRLQDSQRSEKEFVAEMATLGSV-KNRNLVPLLGFCMAKKERLLVYKHMPNG 385 (623)
Q Consensus 307 f~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lV~e~~~~g 385 (623)
|...++||+|+||+||.+...+|+.||||++.... .+.+.+|++++.++ +||||+++++++.+.+..++||||++ |
T Consensus 17 ~~~~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~~--~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E~~~-g 93 (434)
T 2rio_A 17 VVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLIDF--CDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELCN-L 93 (434)
T ss_dssp EEEEEEEEECSTTCEEEEEESSSSEEEEEEEEGGG--HHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCS-E
T ss_pred eeccCeEeeCCCeEEEEEEEECCeEEEEEEEcHHH--HHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEecCC-C
Confidence 44568899999999987777789999999986532 45678899999876 89999999999999999999999996 6
Q ss_pred CHhhhccCCCCCCCc---cChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCC-------------CCeEEe
Q 006982 386 SLYDLLHPADDTGKS---VDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDD-------------FEPKIS 449 (623)
Q Consensus 386 sL~~~l~~~~~~~~~---l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~-------------~~~kl~ 449 (623)
+|.+++......... .++..++.++.|++.||+|||+. +|+||||||+|||++.+ +.+||+
T Consensus 94 sL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~kL~ 170 (434)
T 2rio_A 94 NLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSL---KIIHRDLKPQNILVSTSSRFTADQQTGAENLRILIS 170 (434)
T ss_dssp EHHHHHHTC------------CCHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEECCHHHHSCCTTCCCSCEEEEC
T ss_pred CHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEecCcccccccccCCCceEEEEc
Confidence 999999754332221 24445688999999999999999 99999999999999754 489999
Q ss_pred ecccccccCCCCCcccccccCCCCcccccCcccccC-------CCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCccccc
Q 006982 450 DFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYART-------LVATPKGDVYSFGTVLLELVT-GERPTNVAKAPETFK 521 (623)
Q Consensus 450 Dfgla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-------~~~s~k~DV~sfGvil~ellt-g~~P~~~~~~~~~~~ 521 (623)
|||+++.................||++|+|||++.+ ..++.++|||||||++|||++ |+.||......
T Consensus 171 DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~---- 246 (434)
T 2rio_A 171 DFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSR---- 246 (434)
T ss_dssp CCTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTTTH----
T ss_pred ccccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCchhh----
Confidence 999999875433222222234468999999999865 568999999999999999999 99999643221
Q ss_pred ccHHHHHHHHhccCchhhhhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHH
Q 006982 522 GNLVEWIAQLSSTGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQ 581 (623)
Q Consensus 522 ~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~ 581 (623)
............... . .........+..++..|+. .||++|||+.||++
T Consensus 247 --~~~i~~~~~~~~~~~-----~---~~~~~~~~~~~~li~~~L~-~dP~~Rps~~eil~ 295 (434)
T 2rio_A 247 --ESNIIRGIFSLDEMK-----C---LHDRSLIAEATDLISQMID-HDPLKRPTAMKVLR 295 (434)
T ss_dssp --HHHHHHTCCCCCCCT-----T---CCCHHHHHHHHHHHHHHTC-SSGGGSCCHHHHHT
T ss_pred --HHHHhcCCCCccccc-----c---cccccchHHHHHHHHHHhh-CChhhCCCHHHHHh
Confidence 011111111100110 0 0112222345556667776 99999999999975
No 224
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2e-36 Score=318.54 Aligned_cols=194 Identities=25% Similarity=0.369 Sum_probs=163.7
Q ss_pred ccCcccceeeccCccEEEEEEe-CCCcEEEEEEecccc---ccHHHHHHHHHHhCCCCCCCCcceeEEEEeCC------e
Q 006982 305 NSFSKNNIIGSGRTGTMYKALL-EDGTSLMVKRLQDSQ---RSEKEFVAEMATLGSVKNRNLVPLLGFCMAKK------E 374 (623)
Q Consensus 305 ~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~------~ 374 (623)
++|...+.||+|+||.||+|.. .+|+.||+|++.... ...+.+.+|++++++++||||+++++++.... .
T Consensus 25 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~~ 104 (367)
T 1cm8_A 25 AVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTD 104 (367)
T ss_dssp SSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCCC
T ss_pred ceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCce
Confidence 5688899999999999999996 478999999996533 23467889999999999999999999997653 4
Q ss_pred eeEEEecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccc
Q 006982 375 RLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLA 454 (623)
Q Consensus 375 ~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla 454 (623)
.++||||+ +++|.+++.. ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 105 ~~lv~e~~-~~~L~~~~~~-----~~l~~~~~~~~~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~a 175 (367)
T 1cm8_A 105 FYLVMPFM-GTDLGKLMKH-----EKLGEDRIQFLVYQMLKGLRYIHAA---GIIHRDLKPGNLAVNEDCELKILDFGLA 175 (367)
T ss_dssp CEEEEECC-SEEHHHHHHH-----CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTC
T ss_pred EEEEEecC-CCCHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCcCHHHEEEcCCCCEEEEeeecc
Confidence 59999999 8899999853 4588999999999999999999999 9999999999999999999999999999
Q ss_pred cccCCCCCcccccccCCCCcccccCcccccC-CCCCcchhHHHHHHHHHHHHhCCCCCCCC
Q 006982 455 RLMNPIDTHLSTFVNGEFGDLGYVAPEYART-LVATPKGDVYSFGTVLLELVTGERPTNVA 514 (623)
Q Consensus 455 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~k~DV~sfGvil~elltg~~P~~~~ 514 (623)
+..... .....+|..|+|||++.+ ..++.++||||+||++|||++|+.||...
T Consensus 176 ~~~~~~-------~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~ 229 (367)
T 1cm8_A 176 RQADSE-------MTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGS 229 (367)
T ss_dssp EECCSS-------CCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred cccccc-------cCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCC
Confidence 875432 123358999999999876 67899999999999999999999999764
No 225
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=100.00 E-value=2.6e-36 Score=318.23 Aligned_cols=195 Identities=24% Similarity=0.321 Sum_probs=161.7
Q ss_pred ccCcccceeeccCccEEEEEEeC-CCcEEEEEEecccc---ccHHHHHHHHHHhCCCCCCCCcceeEEEEeCC------e
Q 006982 305 NSFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQ---RSEKEFVAEMATLGSVKNRNLVPLLGFCMAKK------E 374 (623)
Q Consensus 305 ~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~------~ 374 (623)
++|...+.||+|+||.||+|... +++.||+|++.... ...+.+.+|+.+++.++||||+++++++.... .
T Consensus 25 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~ 104 (371)
T 2xrw_A 25 KRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQD 104 (371)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCCE
T ss_pred hheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeeccccccccccc
Confidence 57888999999999999999864 68899999986532 33456889999999999999999999997654 6
Q ss_pred eeEEEecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccc
Q 006982 375 RLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLA 454 (623)
Q Consensus 375 ~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla 454 (623)
.++||||+++ +|.+.+. ..+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||++
T Consensus 105 ~~lv~e~~~~-~l~~~~~------~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a 174 (371)
T 2xrw_A 105 VYIVMELMDA-NLCQVIQ------MELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLA 174 (371)
T ss_dssp EEEEEECCSE-EHHHHHH------SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECCCCC-
T ss_pred eEEEEEcCCC-CHHHHHh------hccCHHHHHHHHHHHHHHHHHHHHC---CeecccCCHHHEEEcCCCCEEEEEeecc
Confidence 7999999975 7888884 3488999999999999999999999 9999999999999999999999999999
Q ss_pred cccCCCCCcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCC
Q 006982 455 RLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVA 514 (623)
Q Consensus 455 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~~ 514 (623)
+...... ......||+.|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 175 ~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~ 229 (371)
T 2xrw_A 175 RTAGTSF-----MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGT 229 (371)
T ss_dssp --------------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred ccccccc-----ccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCC
Confidence 8654321 112335899999999999989999999999999999999999999764
No 226
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=100.00 E-value=3.9e-36 Score=306.72 Aligned_cols=250 Identities=21% Similarity=0.307 Sum_probs=195.0
Q ss_pred hccCcccceeeccCccEEEEEEeC-CCcEEEEEEecccc----------ccHHHHHHHHHHhCCCC-CCCCcceeEEEEe
Q 006982 304 TNSFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQ----------RSEKEFVAEMATLGSVK-NRNLVPLLGFCMA 371 (623)
Q Consensus 304 ~~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~----------~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~ 371 (623)
.++|...+.||+|+||.||+|... +++.||+|++.... ...+.+.+|++++.+++ ||||+++++++..
T Consensus 16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~ 95 (298)
T 1phk_A 16 YENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYET 95 (298)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEC
T ss_pred hhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeecc
Confidence 467888999999999999999975 68899999986432 12356789999999995 9999999999999
Q ss_pred CCeeeEEEecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeec
Q 006982 372 KKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDF 451 (623)
Q Consensus 372 ~~~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Df 451 (623)
....++||||+++|+|.+++.. ...+++..++.++.|++.||.|||+. +|+||||||+||+++.++.+||+||
T Consensus 96 ~~~~~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~df 168 (298)
T 1phk_A 96 NTFFFLVFDLMKKGELFDYLTE----KVTLSEKETRKIMRALLEVICALHKL---NIVHRDLKPENILLDDDMNIKLTDF 168 (298)
T ss_dssp SSEEEEEEECCTTCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCC
T ss_pred CCeEEEEEeccCCCcHHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEEcCCCcEEEecc
Confidence 9999999999999999999963 24689999999999999999999999 9999999999999999999999999
Q ss_pred ccccccCCCCCcccccccCCCCcccccCccccc------CCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCcccccccHH
Q 006982 452 GLARLMNPIDTHLSTFVNGEFGDLGYVAPEYAR------TLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLV 525 (623)
Q Consensus 452 gla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~------~~~~s~k~DV~sfGvil~elltg~~P~~~~~~~~~~~~~l~ 525 (623)
|++........ .....+++.|+|||++. ...++.++||||||+++|||++|+.||..... .
T Consensus 169 g~~~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~--------~ 235 (298)
T 1phk_A 169 GFSCQLDPGEK-----LREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQ--------M 235 (298)
T ss_dssp TTCEECCTTCC-----BCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH--------H
T ss_pred cchhhcCCCcc-----cccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCccH--------H
Confidence 99987654221 12335899999999885 45678999999999999999999999965321 1
Q ss_pred HHHHHHhccCchhhhhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHH
Q 006982 526 EWIAQLSSTGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQ 581 (623)
Q Consensus 526 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~ 581 (623)
........... ....+.. ...+++ +..++..|+. .||++|||+.|+++
T Consensus 236 ~~~~~~~~~~~--~~~~~~~--~~~~~~---l~~li~~~l~-~dp~~Rps~~~ll~ 283 (298)
T 1phk_A 236 LMLRMIMSGNY--QFGSPEW--DDYSDT---VKDLVSRFLV-VQPQKRYTAEEALA 283 (298)
T ss_dssp HHHHHHHHTCC--CCCTTTG--GGSCHH---HHHHHHHHCC-SSGGGSCCHHHHTT
T ss_pred HHHHHHhcCCc--ccCcccc--cccCHH---HHHHHHHHcc-CCcccCCCHHHHHh
Confidence 11111111000 0000000 012233 3444556666 99999999999875
No 227
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=100.00 E-value=3.6e-36 Score=316.41 Aligned_cols=202 Identities=22% Similarity=0.352 Sum_probs=171.2
Q ss_pred hccCcccceeeccCccEEEEEEeC-CCcEEEEEEecccc--ccHHHHHHHHHHhCCCCCCCCcceeEEEEeC-----Cee
Q 006982 304 TNSFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQ--RSEKEFVAEMATLGSVKNRNLVPLLGFCMAK-----KER 375 (623)
Q Consensus 304 ~~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~-----~~~ 375 (623)
.++|...+.||+|+||.||+|... ++..||+|++.... ...+.+.+|++++.+++||||+++++++... ...
T Consensus 26 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 105 (364)
T 3qyz_A 26 GPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDV 105 (364)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCE
T ss_pred cccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccceE
Confidence 357888999999999999999965 68889999997533 3346788999999999999999999999765 357
Q ss_pred eEEEecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeeccccc
Q 006982 376 LLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLAR 455 (623)
Q Consensus 376 ~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~ 455 (623)
++|+||++ |+|.+++.. ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++
T Consensus 106 ~iv~e~~~-~~L~~~l~~-----~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~ 176 (364)
T 3qyz_A 106 YIVQDLME-TDLYKLLKT-----QHLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLAR 176 (364)
T ss_dssp EEEEECCS-EEHHHHHHH-----CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCE
T ss_pred EEEEcccC-cCHHHHHHh-----CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCChHhEEECCCCCEEEEeCcceE
Confidence 89999997 599999853 4589999999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCCcccccccCCCCcccccCcccccC-CCCCcchhHHHHHHHHHHHHhCCCCCCCCC
Q 006982 456 LMNPIDTHLSTFVNGEFGDLGYVAPEYART-LVATPKGDVYSFGTVLLELVTGERPTNVAK 515 (623)
Q Consensus 456 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~k~DV~sfGvil~elltg~~P~~~~~ 515 (623)
........ ........||+.|+|||++.+ ..++.++|||||||++|||++|+.||....
T Consensus 177 ~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~ 236 (364)
T 3qyz_A 177 VADPDHDH-TGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 236 (364)
T ss_dssp ECCGGGCB-CCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred ecCCCCCc-cccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCC
Confidence 76542221 111233468999999998654 458999999999999999999999997644
No 228
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=100.00 E-value=4.8e-36 Score=317.55 Aligned_cols=201 Identities=23% Similarity=0.278 Sum_probs=170.3
Q ss_pred hccCcccceeeccCccEEEEEEeC-CCcEEEEEEeccccccHHHHHHHHHHhCCCC-CC-----CCcceeEEEEeCCeee
Q 006982 304 TNSFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQRSEKEFVAEMATLGSVK-NR-----NLVPLLGFCMAKKERL 376 (623)
Q Consensus 304 ~~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~-h~-----niv~l~~~~~~~~~~~ 376 (623)
.++|...+.||+|+||.||+|... +++.||+|++.........+..|++++..++ |+ +++++++++...+..+
T Consensus 53 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~ 132 (382)
T 2vx3_A 53 MDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRNHLC 132 (382)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSSHHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEETTEEE
T ss_pred eeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEeccHHHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccCCceE
Confidence 467899999999999999999965 6889999999866555567778888877774 44 4999999999999999
Q ss_pred EEEecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeC--CCCCeEEeecccc
Q 006982 377 LVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLD--DDFEPKISDFGLA 454 (623)
Q Consensus 377 lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~--~~~~~kl~Dfgla 454 (623)
+||||++ |+|.+++..... ..+++..+..++.|++.||.|||+. ..+|+||||||+|||++ .++.+||+|||++
T Consensus 133 lv~e~~~-~~L~~~l~~~~~--~~~~~~~~~~i~~qi~~al~~lH~~-~~~ivHrDlkp~NIll~~~~~~~~kL~DFG~a 208 (382)
T 2vx3_A 133 LVFEMLS-YNLYDLLRNTNF--RGVSLNLTRKFAQQMCTALLFLATP-ELSIIHCDLKPENILLCNPKRSAIKIVDFGSS 208 (382)
T ss_dssp EEEECCC-CBHHHHHHHTTT--SCCCHHHHHHHHHHHHHHHHHHTST-TTCEECCCCSGGGEEESSTTSCCEEECCCTTC
T ss_pred EEEecCC-CCHHHHHhhcCc--CCCCHHHHHHHHHHHHHHHHHhccC-CCCEEcCCCCcccEEEecCCCCcEEEEeccCc
Confidence 9999996 599999865432 4589999999999999999999952 12899999999999994 5788999999999
Q ss_pred cccCCCCCcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCC
Q 006982 455 RLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAK 515 (623)
Q Consensus 455 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~~~ 515 (623)
+...... ....||+.|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 209 ~~~~~~~-------~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~ 262 (382)
T 2vx3_A 209 CQLGQRI-------YQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGAN 262 (382)
T ss_dssp EETTCCC-------CSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred eeccccc-------ccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence 8764321 22358999999999999999999999999999999999999998643
No 229
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=100.00 E-value=2.3e-36 Score=318.52 Aligned_cols=199 Identities=19% Similarity=0.282 Sum_probs=168.9
Q ss_pred ccCcccceeeccCccEEEEEEe-CCCcEEEEEEeccccccHHHHHHHHHHhCCCC-----------CCCCcceeEEEEeC
Q 006982 305 NSFSKNNIIGSGRTGTMYKALL-EDGTSLMVKRLQDSQRSEKEFVAEMATLGSVK-----------NRNLVPLLGFCMAK 372 (623)
Q Consensus 305 ~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~-----------h~niv~l~~~~~~~ 372 (623)
++|...+.||+|+||.||+|.. .+++.||+|++.........+.+|++++.+++ ||||+++++++...
T Consensus 19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~~~ 98 (373)
T 1q8y_A 19 ARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHK 98 (373)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEEE
T ss_pred CeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCCccchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhhcc
Confidence 5688899999999999999996 57899999999876656677889999988886 89999999998865
Q ss_pred C----eeeEEEecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeC------C
Q 006982 373 K----ERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLD------D 442 (623)
Q Consensus 373 ~----~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~------~ 442 (623)
. ..++||||+ +++|.+++.... ...+++..+..++.|++.||+|||+++ +|+||||||+|||++ .
T Consensus 99 ~~~~~~~~lv~e~~-~~~L~~~~~~~~--~~~~~~~~~~~i~~qi~~aL~~lH~~~--~ivH~Dikp~NIll~~~~~~~~ 173 (373)
T 1q8y_A 99 GPNGVHVVMVFEVL-GENLLALIKKYE--HRGIPLIYVKQISKQLLLGLDYMHRRC--GIIHTDIKPENVLMEIVDSPEN 173 (373)
T ss_dssp ETTEEEEEEEECCC-CEEHHHHHHHTT--TSCCCHHHHHHHHHHHHHHHHHHHHTT--CEECSCCSGGGEEEEEEETTTT
T ss_pred CCCCceEEEEEecC-CCCHHHHHHHhh--ccCCcHHHHHHHHHHHHHHHHHHHhcC--CEEecCCChHHeEEeccCCCcC
Confidence 4 678999999 899999996543 245899999999999999999999953 799999999999994 4
Q ss_pred CCCeEEeecccccccCCCCCcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCC
Q 006982 443 DFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAK 515 (623)
Q Consensus 443 ~~~~kl~Dfgla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~~~ 515 (623)
.+.+||+|||+++...... ....||+.|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 174 ~~~~kl~Dfg~a~~~~~~~-------~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~ 239 (373)
T 1q8y_A 174 LIQIKIADLGNACWYDEHY-------TNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDE 239 (373)
T ss_dssp EEEEEECCCTTCEETTBCC-------CSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC----
T ss_pred cceEEEcccccccccCCCC-------CCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCc
Confidence 4589999999998764321 22358999999999999999999999999999999999999997543
No 230
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=100.00 E-value=1.1e-35 Score=302.04 Aligned_cols=250 Identities=20% Similarity=0.299 Sum_probs=195.1
Q ss_pred HhccCcccceeeccCccEEEEEEeC-CCcEEEEEEecccc---ccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEE
Q 006982 303 ATNSFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQ---RSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLV 378 (623)
Q Consensus 303 ~~~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV 378 (623)
..++|...+.||+|+||.||+|... +++.||+|++.... .....+.+|++++.+++||||+++++++.+....++|
T Consensus 20 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 99 (287)
T 2wei_A 20 FAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIV 99 (287)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred HhhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEEEE
Confidence 3467999999999999999999975 78999999986532 3567889999999999999999999999999999999
Q ss_pred EecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCC---CCeEEeeccccc
Q 006982 379 YKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDD---FEPKISDFGLAR 455 (623)
Q Consensus 379 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~---~~~kl~Dfgla~ 455 (623)
+||+++++|.+++.. ...+++..++.++.|++.||.|||+. +|+||||||+||+++.+ +.+||+|||++.
T Consensus 100 ~e~~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~ 172 (287)
T 2wei_A 100 GELYTGGELFDEIIK----RKRFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLST 172 (287)
T ss_dssp ECCCCSCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCEEECSTTGGG
T ss_pred EEccCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCChhhEEEecCCCcccEEEeccCcce
Confidence 999999999998853 24689999999999999999999999 99999999999999754 479999999998
Q ss_pred ccCCCCCcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCcccccccHHHHHHHHhccC
Q 006982 456 LMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTG 535 (623)
Q Consensus 456 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~~~~~~~~~~~l~~~~~~~~~~~ 535 (623)
........ ....+|+.|+|||.+.+ .++.++||||||+++|||++|+.||..... ...........
T Consensus 173 ~~~~~~~~-----~~~~~~~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~--------~~~~~~~~~~~ 238 (287)
T 2wei_A 173 CFQQNTKM-----KDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNE--------YDILKRVETGK 238 (287)
T ss_dssp TBCCCSSC-----SCHHHHHTTCCHHHHTT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSH--------HHHHHHHHHCC
T ss_pred eecCCCcc-----ccccCcccccChHHhcC-CCCCchhhHhHHHHHHHHHhCCCCCCCCCH--------HHHHHHHHcCC
Confidence 76542221 11237889999999876 489999999999999999999999975321 11111111110
Q ss_pred chhhhhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHH
Q 006982 536 QLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQ 581 (623)
Q Consensus 536 ~~~~~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~ 581 (623)
.... .+ .....++++. .++..|+. .||++|||+.|+++
T Consensus 239 ~~~~--~~--~~~~~~~~~~---~li~~~l~-~dp~~Rps~~ell~ 276 (287)
T 2wei_A 239 YAFD--LP--QWRTISDDAK---DLIRKMLT-FHPSLRITATQCLE 276 (287)
T ss_dssp CCCC--SG--GGTTSCHHHH---HHHHHHTC-SSGGGSCCHHHHHH
T ss_pred CCCC--ch--hhhhcCHHHH---HHHHHHcc-cChhhCcCHHHHhc
Confidence 0000 00 0012233444 44456666 99999999999987
No 231
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=100.00 E-value=8.9e-37 Score=315.62 Aligned_cols=201 Identities=24% Similarity=0.349 Sum_probs=168.8
Q ss_pred HhccCcccceeeccCccEEEEEEe--CCCcEEEEEEeccccc---cHHHHHHHHHHhCCC---CCCCCcceeEEEE----
Q 006982 303 ATNSFSKNNIIGSGRTGTMYKALL--EDGTSLMVKRLQDSQR---SEKEFVAEMATLGSV---KNRNLVPLLGFCM---- 370 (623)
Q Consensus 303 ~~~~f~~~~~lG~G~~g~Vy~~~~--~~~~~vavK~~~~~~~---~~~~~~~e~~~l~~l---~h~niv~l~~~~~---- 370 (623)
+.++|...+.||+|+||.||+|.. .+++.||+|++..... ....+.+|+++++.+ +||||+++++++.
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~ 88 (326)
T 1blx_A 9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRT 88 (326)
T ss_dssp GGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEEC
T ss_pred chhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeeccc
Confidence 457899999999999999999997 4688999999864321 123455677666655 8999999999987
Q ss_pred -eCCeeeEEEecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEe
Q 006982 371 -AKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKIS 449 (623)
Q Consensus 371 -~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~ 449 (623)
.....++|+||++ |+|.+++.... ...+++..++.++.|++.||.|||+. +|+||||||+||+++.++.+||+
T Consensus 89 ~~~~~~~lv~e~~~-~~L~~~l~~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~---gi~H~dlkp~Nili~~~~~~kl~ 162 (326)
T 1blx_A 89 DRETKLTLVFEHVD-QDLTTYLDKVP--EPGVPTETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLA 162 (326)
T ss_dssp SSEEEEEEEEECCS-CBHHHHHHHSC--TTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEEC
T ss_pred CCCceEEEEEecCC-CCHHHHHHhcc--cCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCCHHHeEEcCCCCEEEe
Confidence 4456789999998 69999986543 24589999999999999999999999 99999999999999999999999
Q ss_pred ecccccccCCCCCcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCC
Q 006982 450 DFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVA 514 (623)
Q Consensus 450 Dfgla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~~ 514 (623)
|||+++...... ......||+.|+|||++.+..++.++||||||+++|||++|+.||...
T Consensus 163 Dfg~~~~~~~~~-----~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~ 222 (326)
T 1blx_A 163 DFGLARIYSFQM-----ALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGS 222 (326)
T ss_dssp SCCSCCCCCGGG-----GGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred cCcccccccCCC-----CccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCC
Confidence 999998654321 122345899999999999989999999999999999999999999754
No 232
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=100.00 E-value=5.3e-36 Score=315.91 Aligned_cols=194 Identities=22% Similarity=0.365 Sum_probs=166.0
Q ss_pred hccCcccceeeccCccEEEEEEeC-CCcEEEEEEeccccc---cHHHHHHHHHHhCCCCCCCCcceeEEEEeCCee----
Q 006982 304 TNSFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQR---SEKEFVAEMATLGSVKNRNLVPLLGFCMAKKER---- 375 (623)
Q Consensus 304 ~~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~---- 375 (623)
.++|...+.||+|+||.||+|... +++.||+|++..... ..+.+.+|+.++++++||||+++++++...+..
T Consensus 41 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 120 (371)
T 4exu_A 41 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFY 120 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTCC
T ss_pred cccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccce
Confidence 357888999999999999999964 689999999976432 346788999999999999999999999877654
Q ss_pred --eEEEecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeeccc
Q 006982 376 --LLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGL 453 (623)
Q Consensus 376 --~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgl 453 (623)
++||||++ |+|.+++. ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 121 ~~~lv~e~~~-~~l~~~~~------~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kL~Dfg~ 190 (371)
T 4exu_A 121 DFYLVMPFMQ-TDLQKIMG------MEFSEEKIQYLVYQMLKGLKYIHSA---GVVHRDLKPGNLAVNEDCELKILDFGL 190 (371)
T ss_dssp CCEEEEECCC-EEHHHHTT------SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECSTTC
T ss_pred eEEEEEcccc-ccHHHHhh------cCCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCcCHHHeEECCCCCEEEEecCc
Confidence 99999997 68988873 3489999999999999999999999 999999999999999999999999999
Q ss_pred ccccCCCCCcccccccCCCCcccccCcccccC-CCCCcchhHHHHHHHHHHHHhCCCCCCCC
Q 006982 454 ARLMNPIDTHLSTFVNGEFGDLGYVAPEYART-LVATPKGDVYSFGTVLLELVTGERPTNVA 514 (623)
Q Consensus 454 a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~k~DV~sfGvil~elltg~~P~~~~ 514 (623)
++..... .....||+.|+|||++.+ ..++.++|||||||++|||++|+.||...
T Consensus 191 a~~~~~~-------~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~ 245 (371)
T 4exu_A 191 ARHADAE-------MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGK 245 (371)
T ss_dssp C---------------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred ccccccC-------cCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCC
Confidence 9865432 123357999999999877 67899999999999999999999999754
No 233
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=100.00 E-value=2.6e-36 Score=322.18 Aligned_cols=204 Identities=22% Similarity=0.312 Sum_probs=154.9
Q ss_pred cCcc-cceeeccCccEEEEEEeC---CCcEEEEEEeccccccHHHHHHHHHHhCCCCCCCCcceeEEEEe--CCeeeEEE
Q 006982 306 SFSK-NNIIGSGRTGTMYKALLE---DGTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGFCMA--KKERLLVY 379 (623)
Q Consensus 306 ~f~~-~~~lG~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~--~~~~~lV~ 379 (623)
.|.. .++||+|+||.||+|... ++..||+|++..... ...+.+|++++++++||||+++++++.. ....++||
T Consensus 21 ~y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~~-~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~lv~ 99 (405)
T 3rgf_A 21 LFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGI-SMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLF 99 (405)
T ss_dssp HEECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSSC-CHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEEEEEE
T ss_pred hhhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCCC-CHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeEEEEE
Confidence 3444 458999999999999965 578899999975543 3467899999999999999999999965 56789999
Q ss_pred ecCCCCCHhhhccCCC-----CCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceee----CCCCCeEEee
Q 006982 380 KHMPNGSLYDLLHPAD-----DTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILL----DDDFEPKISD 450 (623)
Q Consensus 380 e~~~~gsL~~~l~~~~-----~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl----~~~~~~kl~D 450 (623)
||+++ +|.+++.... .....+++..++.++.|++.||+|||+. +|+||||||+|||+ +.++.+||+|
T Consensus 100 e~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kl~D 175 (405)
T 3rgf_A 100 DYAEH-DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPERGRVKIAD 175 (405)
T ss_dssp ECCSE-EHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECCSSTTTTCEEECC
T ss_pred eCCCC-CHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhC---CEeCCCcCHHHeEEecCCCCCCcEEEEE
Confidence 99974 8888774211 1223589999999999999999999999 99999999999999 7789999999
Q ss_pred cccccccCCCCCcccccccCCCCcccccCcccccC-CCCCcchhHHHHHHHHHHHHhCCCCCCCCC
Q 006982 451 FGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYART-LVATPKGDVYSFGTVLLELVTGERPTNVAK 515 (623)
Q Consensus 451 fgla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~k~DV~sfGvil~elltg~~P~~~~~ 515 (623)
||+++........ ........||+.|+|||++.+ ..++.++|||||||++|||++|+.||....
T Consensus 176 fg~a~~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~ 240 (405)
T 3rgf_A 176 MGFARLFNSPLKP-LADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQ 240 (405)
T ss_dssp TTCCC-----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCCC
T ss_pred CCCceecCCCCcc-cccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCcc
Confidence 9999876432111 112233458999999999887 458999999999999999999999997543
No 234
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=100.00 E-value=2.4e-36 Score=317.82 Aligned_cols=194 Identities=25% Similarity=0.371 Sum_probs=153.2
Q ss_pred ccCcccceeeccCccEEEEEEe-CCCcEEEEEEecccc---ccHHHHHHHHHHhCCCCCCCCcceeEEEEeC------Ce
Q 006982 305 NSFSKNNIIGSGRTGTMYKALL-EDGTSLMVKRLQDSQ---RSEKEFVAEMATLGSVKNRNLVPLLGFCMAK------KE 374 (623)
Q Consensus 305 ~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~------~~ 374 (623)
++|...+.||+|+||.||+|.. .+|+.||+|++.... ...+.+.+|++++++++||||+++++++... ..
T Consensus 29 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~~ 108 (367)
T 2fst_X 29 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFND 108 (367)
T ss_dssp TTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCC
T ss_pred CceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCCe
Confidence 5788899999999999999985 468999999996532 2346788999999999999999999998754 45
Q ss_pred eeEEEecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccc
Q 006982 375 RLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLA 454 (623)
Q Consensus 375 ~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla 454 (623)
.++|+||+ +++|.+++.. ..+++..+..++.|+++||+|||+. +|+||||||+|||++.++.+||+|||++
T Consensus 109 ~~lv~e~~-~~~L~~~~~~-----~~l~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kL~DFG~a 179 (367)
T 2fst_X 109 VYLVTHLM-GADLNNIVKC-----QKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA 179 (367)
T ss_dssp CEEEEECC-CEECC----------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECC----
T ss_pred EEEEeccc-CCCHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHhhEEECCCCCEEEeecccc
Confidence 78999999 7899998852 4689999999999999999999999 9999999999999999999999999999
Q ss_pred cccCCCCCcccccccCCCCcccccCcccccC-CCCCcchhHHHHHHHHHHHHhCCCCCCCC
Q 006982 455 RLMNPIDTHLSTFVNGEFGDLGYVAPEYART-LVATPKGDVYSFGTVLLELVTGERPTNVA 514 (623)
Q Consensus 455 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~k~DV~sfGvil~elltg~~P~~~~ 514 (623)
+..... .....||..|+|||++.+ ..++.++||||+||++|||++|+.||...
T Consensus 180 ~~~~~~-------~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~ 233 (367)
T 2fst_X 180 RHTADE-------MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 233 (367)
T ss_dssp ------------------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred cccccc-------CCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence 865431 122358999999999876 67899999999999999999999999764
No 235
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=100.00 E-value=5.6e-36 Score=311.33 Aligned_cols=253 Identities=20% Similarity=0.269 Sum_probs=167.7
Q ss_pred hccCccc-ceeeccCccEEEEEEeC-CCcEEEEEEeccccccHHHHHHHHHHhCCCCCCCCcceeEEEEe----CCeeeE
Q 006982 304 TNSFSKN-NIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGFCMA----KKERLL 377 (623)
Q Consensus 304 ~~~f~~~-~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~----~~~~~l 377 (623)
.++|... ++||+|+||.||+|... +++.||+|++........++. ..+..++||||+++++++.. ....++
T Consensus 27 ~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~e~~---~~~~~~~h~~i~~~~~~~~~~~~~~~~~~l 103 (336)
T 3fhr_A 27 TDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSPKARQEVD---HHWQASGGPHIVCILDVYENMHHGKRCLLI 103 (336)
T ss_dssp GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESSHHHHHHHH---HHHHHTTSTTBCCEEEEEEEEETTEEEEEE
T ss_pred cceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCcHHHHHHHH---HHHHhcCCCChHHHHHHHhhccCCCceEEE
Confidence 4567774 57999999999999976 689999999966443333222 23455689999999999876 345789
Q ss_pred EEecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCC---CCCeEEeecccc
Q 006982 378 VYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDD---DFEPKISDFGLA 454 (623)
Q Consensus 378 V~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~---~~~~kl~Dfgla 454 (623)
||||+++|+|.+++.... ...+++..++.++.|++.||.|||+. +|+||||||+||+++. ++.+||+|||++
T Consensus 104 v~e~~~gg~L~~~l~~~~--~~~l~~~~~~~i~~ql~~~l~~LH~~---~ivH~dlkp~NIll~~~~~~~~~kl~Dfg~~ 178 (336)
T 3fhr_A 104 IMECMEGGELFSRIQERG--DQAFTEREAAEIMRDIGTAIQFLHSH---NIAHRDVKPENLLYTSKEKDAVLKLTDFGFA 178 (336)
T ss_dssp EEECCTTEEHHHHHHTC---CCCCBHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSTTCCEEECCCTTC
T ss_pred EEeccCCCCHHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEEecCCCceEEEeccccc
Confidence 999999999999997542 25689999999999999999999999 9999999999999976 455999999999
Q ss_pred cccCCCCCcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCcccccccHHHHHHHHhcc
Q 006982 455 RLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSST 534 (623)
Q Consensus 455 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~~~~~~~~~~~l~~~~~~~~~~ 534 (623)
+...... .....+|+.|+|||++....++.++||||||+++|||++|+.||........... ....+....
T Consensus 179 ~~~~~~~------~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~-~~~~~~~~~-- 249 (336)
T 3fhr_A 179 KETTQNA------LQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPG-MKRRIRLGQ-- 249 (336)
T ss_dssp EEC----------------------------CHHHHHHHHHHHHHHHHHHHHSSCCC-----------------------
T ss_pred eeccccc------cccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhhhh-HHHhhhccc--
Confidence 8654321 1223479999999999888899999999999999999999999975433211000 000000000
Q ss_pred CchhhhhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHH
Q 006982 535 GQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQF 582 (623)
Q Consensus 535 ~~~~~~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~ 582 (623)
.....+ .....++++.+ ++..|+. .||++|||++|+++.
T Consensus 250 ---~~~~~~--~~~~~~~~~~~---li~~~L~-~dP~~Rpt~~ell~h 288 (336)
T 3fhr_A 250 ---YGFPNP--EWSEVSEDAKQ---LIRLLLK-TDPTERLTITQFMNH 288 (336)
T ss_dssp ----CCCTT--TSTTCCHHHHH---HHHHHSC-SSGGGSCCHHHHHHS
T ss_pred ---cccCch--hhccCCHHHHH---HHHHHCC-CChhHCcCHHHHhcC
Confidence 000000 00123344444 4456666 999999999999873
No 236
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=100.00 E-value=4.7e-36 Score=309.00 Aligned_cols=200 Identities=20% Similarity=0.331 Sum_probs=161.4
Q ss_pred ccCcccceeeccCccEEEEEEeC-CCcEEEEEEecccc-ccHHHHHHHHHHhCCCCCCCCcceeEEEE------------
Q 006982 305 NSFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQ-RSEKEFVAEMATLGSVKNRNLVPLLGFCM------------ 370 (623)
Q Consensus 305 ~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~------------ 370 (623)
++|...+.||+|+||.||+|... +++.||+|++.... ...+.+.+|++++.+++||||+++++++.
T Consensus 11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~ 90 (320)
T 2i6l_A 11 SRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGS 90 (320)
T ss_dssp TTEEEEEECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC----
T ss_pred CceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhcCCCCeeEEEEecccccccccccccc
Confidence 56888999999999999999976 48999999986543 34567899999999999999999999874
Q ss_pred --eCCeeeEEEecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeC-CCCCeE
Q 006982 371 --AKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLD-DDFEPK 447 (623)
Q Consensus 371 --~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~-~~~~~k 447 (623)
+....++||||++ |+|.+++.. ..+++..++.++.|++.||+|||+. +|+||||||+||+++ +++.+|
T Consensus 91 ~~~~~~~~lv~e~~~-~~L~~~~~~-----~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~k 161 (320)
T 2i6l_A 91 LTELNSVYIVQEYME-TDLANVLEQ-----GPLLEEHARLFMYQLLRGLKYIHSA---NVLHRDLKPANLFINTEDLVLK 161 (320)
T ss_dssp CCSCSEEEEEEECCS-EEHHHHHTT-----CCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEEETTTTEEE
T ss_pred ccccCceeEEeeccC-CCHHHHhhc-----CCccHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCeEE
Confidence 3356789999998 699999952 4588999999999999999999999 999999999999997 677999
Q ss_pred EeecccccccCCCCCcccccccCCCCcccccCcccccC-CCCCcchhHHHHHHHHHHHHhCCCCCCCC
Q 006982 448 ISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYART-LVATPKGDVYSFGTVLLELVTGERPTNVA 514 (623)
Q Consensus 448 l~Dfgla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~k~DV~sfGvil~elltg~~P~~~~ 514 (623)
|+|||+++......... .......+|..|+|||.+.. ..++.++||||||+++|||++|+.||...
T Consensus 162 l~Dfg~~~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~ 228 (320)
T 2i6l_A 162 IGDFGLARIMDPHYSHK-GHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGA 228 (320)
T ss_dssp ECCCTTCBCC---------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred EccCccccccCCCcccc-cccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCC
Confidence 99999998764321111 11122346889999998865 67899999999999999999999999754
No 237
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=100.00 E-value=4.7e-36 Score=313.85 Aligned_cols=202 Identities=20% Similarity=0.292 Sum_probs=168.6
Q ss_pred hccCcccceeeccCccEEEEEEeC-CCcEEEEEEecccc--ccHHHHHHHHHHhCCCCCCCCcceeEEEEeC-----Cee
Q 006982 304 TNSFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQ--RSEKEFVAEMATLGSVKNRNLVPLLGFCMAK-----KER 375 (623)
Q Consensus 304 ~~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~-----~~~ 375 (623)
.++|...+.||+|+||.||+|... +++.||+|++.... .....+.+|++++.+++||||+++++++... ...
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 89 (353)
T 2b9h_A 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEV 89 (353)
T ss_dssp CTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCCE
T ss_pred ccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccceE
Confidence 357888999999999999999965 68899999996433 3345688999999999999999999998764 567
Q ss_pred eEEEecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeeccccc
Q 006982 376 LLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLAR 455 (623)
Q Consensus 376 ~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~ 455 (623)
++|+||++ |+|.+++.. ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++
T Consensus 90 ~lv~e~~~-~~L~~~~~~-----~~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~ 160 (353)
T 2b9h_A 90 YIIQELMQ-TDLHRVIST-----QMLSDDHIQYFIYQTLRAVKVLHGS---NVIHRDLKPSNLLINSNCDLKVCDFGLAR 160 (353)
T ss_dssp EEEECCCS-EEHHHHHHH-----CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEECCCTTCE
T ss_pred EEEEeccC-ccHHHHHhh-----cCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEEcCCCcEEEEeccccc
Confidence 99999997 599999853 4589999999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCCcccc------cccCCCCcccccCcccccC-CCCCcchhHHHHHHHHHHHHhCCCCCCCC
Q 006982 456 LMNPIDTHLST------FVNGEFGDLGYVAPEYART-LVATPKGDVYSFGTVLLELVTGERPTNVA 514 (623)
Q Consensus 456 ~~~~~~~~~~~------~~~~~~gt~~y~aPE~~~~-~~~s~k~DV~sfGvil~elltg~~P~~~~ 514 (623)
........... ......||+.|+|||++.. ..++.++|||||||++|||++|+.||...
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~ 226 (353)
T 2b9h_A 161 IIDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGR 226 (353)
T ss_dssp ECC----------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred ccccccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCC
Confidence 76532211110 1122358999999998754 67899999999999999999999999754
No 238
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=100.00 E-value=1e-35 Score=311.08 Aligned_cols=197 Identities=17% Similarity=0.295 Sum_probs=169.8
Q ss_pred ccCcccceeeccCccEEEEEEeC-CC-cEEEEEEeccccccHHHHHHHHHHhCCCCCCC------CcceeEEEEeCCeee
Q 006982 305 NSFSKNNIIGSGRTGTMYKALLE-DG-TSLMVKRLQDSQRSEKEFVAEMATLGSVKNRN------LVPLLGFCMAKKERL 376 (623)
Q Consensus 305 ~~f~~~~~lG~G~~g~Vy~~~~~-~~-~~vavK~~~~~~~~~~~~~~e~~~l~~l~h~n------iv~l~~~~~~~~~~~ 376 (623)
++|...+.||+|+||.||+|... ++ ..||+|++.........+.+|++++.+++|++ ++.+.+++......+
T Consensus 19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (355)
T 2eu9_A 19 ERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGHMC 98 (355)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEETTEEE
T ss_pred ccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEcccccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeCCeEE
Confidence 57888999999999999999964 34 68999999876656677888999998887765 899999999999999
Q ss_pred EEEecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceee----------------
Q 006982 377 LVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILL---------------- 440 (623)
Q Consensus 377 lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl---------------- 440 (623)
+||||+ ++++.+++.... ...+++..++.++.|++.||+|||+. +|+||||||+|||+
T Consensus 99 lv~e~~-~~~l~~~l~~~~--~~~~~~~~~~~i~~qi~~~L~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~~~~~~~~ 172 (355)
T 2eu9_A 99 IAFELL-GKNTFEFLKENN--FQPYPLPHVRHMAYQLCHALRFLHEN---QLTHTDLKPENILFVNSEFETLYNEHKSCE 172 (355)
T ss_dssp EEEECC-CCBHHHHHHHTT--TCCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEESCCCEEEEECCC-CCC
T ss_pred EEEecc-CCChHHHHHhcc--CCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEeccccccccccccccc
Confidence 999999 667777765432 24689999999999999999999999 99999999999999
Q ss_pred ---CCCCCeEEeecccccccCCCCCcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCC
Q 006982 441 ---DDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVA 514 (623)
Q Consensus 441 ---~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~~ 514 (623)
+.++.+||+|||+++...... ....||+.|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 173 ~~~~~~~~~kl~Dfg~~~~~~~~~-------~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~ 242 (355)
T 2eu9_A 173 EKSVKNTSIRVADFGSATFDHEHH-------TTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTH 242 (355)
T ss_dssp EEEESCCCEEECCCTTCEETTSCC-------CSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred ccccCCCcEEEeecCccccccccc-------cCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCC
Confidence 568899999999998654321 1235899999999999999999999999999999999999999754
No 239
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=100.00 E-value=1e-35 Score=308.01 Aligned_cols=256 Identities=21% Similarity=0.309 Sum_probs=172.8
Q ss_pred ccCcccceeeccCccEEEEEEeC-CCcEEEEEEecccc--ccHHHHHHHHH-HhCCCCCCCCcceeEEEEeCCeeeEEEe
Q 006982 305 NSFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQ--RSEKEFVAEMA-TLGSVKNRNLVPLLGFCMAKKERLLVYK 380 (623)
Q Consensus 305 ~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~e~~-~l~~l~h~niv~l~~~~~~~~~~~lV~e 380 (623)
++|...+.||+|+||.||+|... +++.||+|++.... .....+..|+. +++.++||||+++++++.+.+..++|||
T Consensus 22 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~lv~e 101 (327)
T 3aln_A 22 EDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICME 101 (327)
T ss_dssp CSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred HHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEEEEe
Confidence 56888899999999999999975 78999999996543 23345556665 7888899999999999999999999999
Q ss_pred cCCCCCHhhhccCCC-CCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCC
Q 006982 381 HMPNGSLYDLLHPAD-DTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNP 459 (623)
Q Consensus 381 ~~~~gsL~~~l~~~~-~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~ 459 (623)
|+++ +|.+++.... .....+++..+..++.|++.||.|||+.. +|+||||||+||+++.++.+||+|||+++....
T Consensus 102 ~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~--~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~ 178 (327)
T 3aln_A 102 LMST-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENL--KIIHRDIKPSNILLDRSGNIKLCDFGISGQLVD 178 (327)
T ss_dssp CCSE-EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHH--SCCCSCCCGGGEEEETTTEEEECCCSSSCC---
T ss_pred ecCC-ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhccC--CEeECCCCHHHEEEcCCCCEEEccCCCceeccc
Confidence 9985 8877764210 11356899999999999999999999853 799999999999999999999999999987643
Q ss_pred CCCcccccccCCCCcccccCcccc----cCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCcccccccHHHHHHHHhccC
Q 006982 460 IDTHLSTFVNGEFGDLGYVAPEYA----RTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTG 535 (623)
Q Consensus 460 ~~~~~~~~~~~~~gt~~y~aPE~~----~~~~~s~k~DV~sfGvil~elltg~~P~~~~~~~~~~~~~l~~~~~~~~~~~ 535 (623)
... .....||+.|+|||++ .+..++.++||||||+++|||++|+.||........ ....... .
T Consensus 179 ~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~-------~~~~~~~-~ 245 (327)
T 3aln_A 179 SIA-----KTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFD-------QLTQVVK-G 245 (327)
T ss_dssp --------------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC--------------CCCCC-S
T ss_pred ccc-----cccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHHH-------HHHHHhc-C
Confidence 211 1122489999999998 456789999999999999999999999975322100 0000000 0
Q ss_pred chhhhhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHH
Q 006982 536 QLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQF 582 (623)
Q Consensus 536 ~~~~~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~ 582 (623)
....+.. . ......++ +.+++..|+. .||++|||+.|+++.
T Consensus 246 ~~~~~~~-~-~~~~~~~~---l~~li~~~l~-~dp~~Rps~~ell~h 286 (327)
T 3aln_A 246 DPPQLSN-S-EEREFSPS---FINFVNLCLT-KDESKRPKYKELLKH 286 (327)
T ss_dssp CCCCCCC-C-SSCCCCHH---HHHHHHHHTC-SSGGGSCCHHHHTTS
T ss_pred CCCCCCC-c-ccccCCHH---HHHHHHHHhh-CChhhCcCHHHHHhC
Confidence 0000000 0 00112333 4444556776 999999999999763
No 240
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=100.00 E-value=3.9e-36 Score=310.34 Aligned_cols=239 Identities=21% Similarity=0.337 Sum_probs=190.5
Q ss_pred hccCcccceeeccCccEEEEEEe-CCCcEEEEEEeccccc-------cHHHHHHHHHHhCCCC--CCCCcceeEEEEeCC
Q 006982 304 TNSFSKNNIIGSGRTGTMYKALL-EDGTSLMVKRLQDSQR-------SEKEFVAEMATLGSVK--NRNLVPLLGFCMAKK 373 (623)
Q Consensus 304 ~~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-------~~~~~~~e~~~l~~l~--h~niv~l~~~~~~~~ 373 (623)
.++|...+.||+|+||.||+|.. .+++.||+|++..... ....+.+|+.++.+++ ||||+++++++...+
T Consensus 42 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~~~~ 121 (320)
T 3a99_A 42 ESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPD 121 (320)
T ss_dssp TTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECSS
T ss_pred cCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEecCC
Confidence 46788999999999999999985 4788999999865431 2245667899998886 599999999999999
Q ss_pred eeeEEEecCCC-CCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeC-CCCCeEEeec
Q 006982 374 ERLLVYKHMPN-GSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLD-DDFEPKISDF 451 (623)
Q Consensus 374 ~~~lV~e~~~~-gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~-~~~~~kl~Df 451 (623)
..++|+||+.+ ++|.+++.. ...+++..++.++.|++.||+|||+. +|+||||||+|||++ +++.+||+||
T Consensus 122 ~~~lv~e~~~~~~~L~~~l~~----~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~kL~Df 194 (320)
T 3a99_A 122 SFVLILERPEPVQDLFDFITE----RGALQEELARSFFWQVLEAVRHCHNC---GVLHRDIKDENILIDLNRGELKLIDF 194 (320)
T ss_dssp EEEEEEECCSSEEEHHHHHHH----HCSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTTEEEECCC
T ss_pred cEEEEEEcCCCCccHHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHHHC---CcEeCCCCHHHEEEeCCCCCEEEeeC
Confidence 99999999976 899999863 24689999999999999999999999 999999999999999 7899999999
Q ss_pred ccccccCCCCCcccccccCCCCcccccCcccccCCCC-CcchhHHHHHHHHHHHHhCCCCCCCCCCcccccccHHHHHHH
Q 006982 452 GLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVA-TPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQ 530 (623)
Q Consensus 452 gla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-s~k~DV~sfGvil~elltg~~P~~~~~~~~~~~~~l~~~~~~ 530 (623)
|+++....... ....||+.|+|||++.+..+ +.++||||||+++|||++|+.||.... .....
T Consensus 195 g~~~~~~~~~~------~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~----------~~~~~ 258 (320)
T 3a99_A 195 GSGALLKDTVY------TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE----------EIIRG 258 (320)
T ss_dssp TTCEECCSSCB------CCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH----------HHHHC
T ss_pred ccccccccccc------cCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChh----------hhhcc
Confidence 99987653211 22348999999999877665 688999999999999999999996310 00000
Q ss_pred HhccCchhhhhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHH
Q 006982 531 LSSTGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQ 581 (623)
Q Consensus 531 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~ 581 (623)
. .......++++. .++..|+. .||++|||++|+++
T Consensus 259 ---~---------~~~~~~~~~~~~---~li~~~l~-~dp~~Rps~~~ll~ 293 (320)
T 3a99_A 259 ---Q---------VFFRQRVSSECQ---HLIRWCLA-LRPSDRPTFEEIQN 293 (320)
T ss_dssp ---C---------CCCSSCCCHHHH---HHHHHHTC-SSGGGSCCHHHHHT
T ss_pred ---c---------ccccccCCHHHH---HHHHHHcc-CChhhCcCHHHHhc
Confidence 0 001112334444 44456776 99999999999976
No 241
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=100.00 E-value=3.3e-35 Score=307.69 Aligned_cols=193 Identities=22% Similarity=0.363 Sum_probs=165.1
Q ss_pred ccCcccceeeccCccEEEEEEeC-CCcEEEEEEeccccc---cHHHHHHHHHHhCCCCCCCCcceeEEEEeCCe------
Q 006982 305 NSFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQR---SEKEFVAEMATLGSVKNRNLVPLLGFCMAKKE------ 374 (623)
Q Consensus 305 ~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~------ 374 (623)
++|...+.||+|+||.||+|... +|+.||+|++..... ..+.+.+|+.++.+++||||+++++++.....
T Consensus 24 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 103 (353)
T 3coi_A 24 KTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYD 103 (353)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCC
T ss_pred ceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEeccccccccee
Confidence 56888899999999999999964 689999999975432 34578899999999999999999999987654
Q ss_pred eeEEEecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccc
Q 006982 375 RLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLA 454 (623)
Q Consensus 375 ~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla 454 (623)
.++||||++ |+|.+++. ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 104 ~~lv~e~~~-~~l~~~~~------~~~~~~~~~~i~~qi~~al~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~Dfg~~ 173 (353)
T 3coi_A 104 FYLVMPFMQ-TDLQKIMG------LKFSEEKIQYLVYQMLKGLKYIHSA---GVVHRDLKPGNLAVNEDCELKILDFGLA 173 (353)
T ss_dssp CEEEEECCS-EEGGGTTT------SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECTTCCEEECSTTCT
T ss_pred EEEEecccc-CCHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEeECCCCcEEEeecccc
Confidence 489999997 59988873 3489999999999999999999999 9999999999999999999999999999
Q ss_pred cccCCCCCcccccccCCCCcccccCcccccC-CCCCcchhHHHHHHHHHHHHhCCCCCCCC
Q 006982 455 RLMNPIDTHLSTFVNGEFGDLGYVAPEYART-LVATPKGDVYSFGTVLLELVTGERPTNVA 514 (623)
Q Consensus 455 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~k~DV~sfGvil~elltg~~P~~~~ 514 (623)
+..... .....+|+.|+|||++.+ ..++.++||||||+++|||++|+.||...
T Consensus 174 ~~~~~~-------~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~ 227 (353)
T 3coi_A 174 RHADAE-------MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGK 227 (353)
T ss_dssp TC---------------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSS
T ss_pred cCCCCC-------ccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence 865431 122347999999999876 67899999999999999999999999754
No 242
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=100.00 E-value=5.2e-36 Score=308.09 Aligned_cols=242 Identities=19% Similarity=0.295 Sum_probs=183.4
Q ss_pred HHHhccCcccceeeccCccEEEEEEe-CCCcEEEEEEeccccc-------cHHHHHHHHHHhCCC----CCCCCcceeEE
Q 006982 301 MKATNSFSKNNIIGSGRTGTMYKALL-EDGTSLMVKRLQDSQR-------SEKEFVAEMATLGSV----KNRNLVPLLGF 368 (623)
Q Consensus 301 ~~~~~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-------~~~~~~~e~~~l~~l----~h~niv~l~~~ 368 (623)
....++|...+.||+|+||.||+|.. .+++.||+|++..... ....+.+|++++.++ +||||++++++
T Consensus 27 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~ 106 (312)
T 2iwi_A 27 EAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDW 106 (312)
T ss_dssp ------CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEE
T ss_pred hhhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEE
Confidence 33457899999999999999999986 4788999999965432 123355788888877 89999999999
Q ss_pred EEeCCeeeEEEec-CCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeC-CCCCe
Q 006982 369 CMAKKERLLVYKH-MPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLD-DDFEP 446 (623)
Q Consensus 369 ~~~~~~~~lV~e~-~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~-~~~~~ 446 (623)
+...+..++|+|| +++++|.+++.. ...+++..++.++.|++.||.|||+. +|+||||||+||+++ +++.+
T Consensus 107 ~~~~~~~~~v~e~~~~~~~L~~~l~~----~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~ 179 (312)
T 2iwi_A 107 FETQEGFMLVLERPLPAQDLFDYITE----KGPLGEGPSRCFFGQVVAAIQHCHSR---GVVHRDIKDENILIDLRRGCA 179 (312)
T ss_dssp C-----CEEEEECCSSEEEHHHHHHH----HCSCCHHHHHHHHHHHHHHHHHHHHH---TEECCCCSGGGEEEETTTTEE
T ss_pred EecCCeEEEEEEecCCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChhhEEEeCCCCeE
Confidence 9999999999999 799999999963 24589999999999999999999999 999999999999999 89999
Q ss_pred EEeecccccccCCCCCcccccccCCCCcccccCcccccCCCCC-cchhHHHHHHHHHHHHhCCCCCCCCCCcccccccHH
Q 006982 447 KISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVAT-PKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLV 525 (623)
Q Consensus 447 kl~Dfgla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s-~k~DV~sfGvil~elltg~~P~~~~~~~~~~~~~l~ 525 (623)
||+|||+++....... ....||..|+|||++.+..+. .++||||||+++|||++|+.||... .
T Consensus 180 kl~dfg~~~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~----------~ 243 (312)
T 2iwi_A 180 KLIDFGSGALLHDEPY------TDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERD----------Q 243 (312)
T ss_dssp EECCCSSCEECCSSCB------CCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSH----------H
T ss_pred EEEEcchhhhcccCcc------cccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCCh----------H
Confidence 9999999987654221 223489999999998776654 5899999999999999999999631 0
Q ss_pred HHHHHHhccCchhhhhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHH
Q 006982 526 EWIAQLSSTGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQ 581 (623)
Q Consensus 526 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~ 581 (623)
+.... ... + ......++ .+++..|+. .||++|||++|+++
T Consensus 244 ~~~~~---~~~--------~-~~~~~~~~---~~li~~~l~-~~p~~Rps~~e~l~ 283 (312)
T 2iwi_A 244 EILEA---ELH--------F-PAHVSPDC---CALIRRCLA-PKPSSRPSLEEILL 283 (312)
T ss_dssp HHHHT---CCC--------C-CTTSCHHH---HHHHHHHTC-SSTTTSCCHHHHHH
T ss_pred HHhhh---ccC--------C-cccCCHHH---HHHHHHHcc-CChhhCcCHHHHhc
Confidence 00000 000 0 11123333 344556776 99999999999975
No 243
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=100.00 E-value=3.2e-35 Score=315.65 Aligned_cols=250 Identities=22% Similarity=0.285 Sum_probs=180.3
Q ss_pred ccCcccceeeccCccEEEEEEeCCCcEEEEEEeccccccHHHHHHHHHHhCCC-CCCCCcceeEEEEeCCeeeEEEecCC
Q 006982 305 NSFSKNNIIGSGRTGTMYKALLEDGTSLMVKRLQDSQRSEKEFVAEMATLGSV-KNRNLVPLLGFCMAKKERLLVYKHMP 383 (623)
Q Consensus 305 ~~f~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lV~e~~~ 383 (623)
.+|...++||+|+||+||.....+++.||||++...... .+.+|++++.++ +|||||++++++.+....++||||++
T Consensus 24 ~~y~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~~~--~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E~~~ 101 (432)
T 3p23_A 24 ISFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECFS--FADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIELCA 101 (432)
T ss_dssp EEEEEEEEEEECGGGCEEEEEESSSSEEEEEEECTTTEE--ECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEEECCS
T ss_pred EEEecCCeeecCcCEEEEEEEEeCCeEEEEEEECHHHHH--HHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEEECCC
Confidence 458888999999999976666668999999999654322 345799999988 89999999999999999999999996
Q ss_pred CCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCC-----CCCeEEeecccccccC
Q 006982 384 NGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDD-----DFEPKISDFGLARLMN 458 (623)
Q Consensus 384 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~-----~~~~kl~Dfgla~~~~ 458 (623)
|+|.+++.... ..+.+..++.++.|++.||+|||+. +|+||||||+|||++. ...+||+|||+++...
T Consensus 102 -g~L~~~l~~~~---~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~~ 174 (432)
T 3p23_A 102 -ATLQEYVEQKD---FAHLGLEPITLLQQTTSGLAHLHSL---NIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLA 174 (432)
T ss_dssp -EEHHHHHHSSS---CCCCSSCHHHHHHHHHHHHHHHHHT---TCCCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC-
T ss_pred -CCHHHHHHhcC---CCccchhHHHHHHHHHHHHHHHHHC---cCEeCCCCHHHEEEecCCCCCceeEEEecccceeecc
Confidence 59999996433 2345556789999999999999999 9999999999999943 3468899999998765
Q ss_pred CCCCcccccccCCCCcccccCccccc---CCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCcccccccHHHHHHHHhcc
Q 006982 459 PIDTHLSTFVNGEFGDLGYVAPEYAR---TLVATPKGDVYSFGTVLLELVT-GERPTNVAKAPETFKGNLVEWIAQLSST 534 (623)
Q Consensus 459 ~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~s~k~DV~sfGvil~ellt-g~~P~~~~~~~~~~~~~l~~~~~~~~~~ 534 (623)
...... .......||++|+|||++. ...++.++|||||||++|||++ |..||...... ........
T Consensus 175 ~~~~~~-~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~---------~~~~~~~~ 244 (432)
T 3p23_A 175 VGRHSF-SRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQR---------QANILLGA 244 (432)
T ss_dssp ------------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTH---------HHHHHTTC
T ss_pred CCCcce-eeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHH---------HHHHHhcc
Confidence 422111 1123345899999999997 4567889999999999999999 88888542211 01111111
Q ss_pred CchhhhhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHH
Q 006982 535 GQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQ 581 (623)
Q Consensus 535 ~~~~~~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~ 581 (623)
... . .+.. ....-..+..++..|+. .||++|||+.||++
T Consensus 245 ~~~-~----~~~~--~~~~~~~~~~li~~~L~-~dP~~Rps~~evl~ 283 (432)
T 3p23_A 245 CSL-D----CLHP--EKHEDVIARELIEKMIA-MDPQKRPSAKHVLK 283 (432)
T ss_dssp CCC-T----TSCT--TCHHHHHHHHHHHHHSC-SSGGGSCCHHHHHT
T ss_pred CCc-c----ccCc--cccccHHHHHHHHHHHh-CCHhhCCCHHHHHh
Confidence 000 0 0000 11112223455566776 99999999999984
No 244
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=100.00 E-value=8e-35 Score=299.74 Aligned_cols=249 Identities=20% Similarity=0.322 Sum_probs=173.7
Q ss_pred ccCcccceeeccCccEEEEEEeC-CCcEEEEEEeccccc--c-HHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEEe
Q 006982 305 NSFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQR--S-EKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYK 380 (623)
Q Consensus 305 ~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~-~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e 380 (623)
++|...+.||+|+||.||+|... +++.||+|++..... . .+.+..+..++..++||||+++++++.+.+..++|||
T Consensus 25 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e 104 (318)
T 2dyl_A 25 NDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAME 104 (318)
T ss_dssp GGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEC
T ss_pred ccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEEEEe
Confidence 56888899999999999999975 789999999965432 2 2334445556888899999999999999999999999
Q ss_pred cCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHh-cCCCCcEecCCCCCceeeCCCCCeEEeecccccccCC
Q 006982 381 HMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHH-NCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNP 459 (623)
Q Consensus 381 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~-~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~ 459 (623)
|+ ++.+..+.... ...+++..+..++.|++.||.|||+ . +|+||||||+||+++.++.+||+|||++.....
T Consensus 105 ~~-~~~~~~l~~~~---~~~~~~~~~~~~~~~i~~~l~~lH~~~---~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~ 177 (318)
T 2dyl_A 105 LM-GTCAEKLKKRM---QGPIPERILGKMTVAIVKALYYLKEKH---GVIHRDVKPSNILLDERGQIKLCDFGISGRLVD 177 (318)
T ss_dssp CC-SEEHHHHHHHH---TSCCCHHHHHHHHHHHHHHHHHHHHHH---CCCCCCCCGGGEEECTTSCEEECCCTTC-----
T ss_pred cc-CCcHHHHHHHh---ccCCCHHHHHHHHHHHHHHHHHHHhhC---CEEeCCCCHHHEEECCCCCEEEEECCCchhccC
Confidence 99 55555554321 2568999999999999999999998 5 899999999999999999999999999986543
Q ss_pred CCCcccccccCCCCcccccCccccc-----CCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCcccccccHHHHHHHHhcc
Q 006982 460 IDTHLSTFVNGEFGDLGYVAPEYAR-----TLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSST 534 (623)
Q Consensus 460 ~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~s~k~DV~sfGvil~elltg~~P~~~~~~~~~~~~~l~~~~~~~~~~ 534 (623)
... .....+|+.|+|||++. ...++.++||||||+++|||++|+.||...... ..........
T Consensus 178 ~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-------~~~~~~~~~~ 245 (318)
T 2dyl_A 178 DKA-----KDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTD-------FEVLTKVLQE 245 (318)
T ss_dssp --------------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCSH-------HHHHHHHHHS
T ss_pred Ccc-----ccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCcc-------HHHHHHHhcc
Confidence 221 11234899999999984 456889999999999999999999999753221 1111111111
Q ss_pred Cchhhhhchhhh-cCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHH
Q 006982 535 GQLQDAIDKCLV-AKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQF 582 (623)
Q Consensus 535 ~~~~~~~d~~l~-~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~ 582 (623)
.. +.+. ....+.++.. ++..|+. .||.+||+++|+++.
T Consensus 246 ~~------~~~~~~~~~~~~l~~---li~~~l~-~dp~~Rps~~~ll~h 284 (318)
T 2dyl_A 246 EP------PLLPGHMGFSGDFQS---FVKDCLT-KDHRKRPKYNKLLEH 284 (318)
T ss_dssp CC------CCCCSSSCCCHHHHH---HHHHHTC-SCTTTSCCHHHHTTS
T ss_pred CC------CCCCccCCCCHHHHH---HHHHHcc-CChhHCcCHHHHhhC
Confidence 00 0000 0112344444 4456776 999999999999863
No 245
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=100.00 E-value=8.4e-35 Score=330.61 Aligned_cols=237 Identities=20% Similarity=0.272 Sum_probs=187.1
Q ss_pred ccCcccceeeccCccEEEEEEeC--CCcEEEEEEecccc--ccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCe-----e
Q 006982 305 NSFSKNNIIGSGRTGTMYKALLE--DGTSLMVKRLQDSQ--RSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKE-----R 375 (623)
Q Consensus 305 ~~f~~~~~lG~G~~g~Vy~~~~~--~~~~vavK~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~-----~ 375 (623)
++|.+.+.||+|+||.||+|... +++.||+|++.... .....+.+|++++.+++||||+++++++...+. .
T Consensus 80 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~~ 159 (681)
T 2pzi_A 80 GQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPVG 159 (681)
T ss_dssp TTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEEE
T ss_pred CceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCcee
Confidence 67899999999999999999975 68999999986532 334578899999999999999999999987665 6
Q ss_pred eEEEecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeeccccc
Q 006982 376 LLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLAR 455 (623)
Q Consensus 376 ~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~ 455 (623)
++||||+++++|.+++. ..++|..++.++.|++.||.|||+. +|+||||||+|||++.+ .+||+|||+++
T Consensus 160 ~lv~E~~~g~~L~~~~~------~~l~~~~~~~~~~qi~~aL~~lH~~---giiHrDlkp~NIll~~~-~~kl~DFG~a~ 229 (681)
T 2pzi_A 160 YIVMEYVGGQSLKRSKG------QKLPVAEAIAYLLEILPALSYLHSI---GLVYNDLKPENIMLTEE-QLKLIDLGAVS 229 (681)
T ss_dssp EEEEECCCCEECC----------CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECSS-CEEECCCTTCE
T ss_pred EEEEEeCCCCcHHHHHh------CCCCHHHHHHHHHHHHHHHHHHHHC---CCeecccChHHeEEeCC-cEEEEecccch
Confidence 99999999999998874 2689999999999999999999999 99999999999999986 89999999998
Q ss_pred ccCCCCCcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCcccccccHHHHHHHHhccC
Q 006982 456 LMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTG 535 (623)
Q Consensus 456 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~~~~~~~~~~~l~~~~~~~~~~~ 535 (623)
..... ....||++|+|||++.+.. +.++|||||||++|||++|..||...........
T Consensus 230 ~~~~~--------~~~~gt~~y~aPE~~~~~~-~~~sDi~slG~~l~~l~~g~~~~~~~~~~~~~~~------------- 287 (681)
T 2pzi_A 230 RINSF--------GYLYGTPGFQAPEIVRTGP-TVATDIYTVGRTLAALTLDLPTRNGRYVDGLPED------------- 287 (681)
T ss_dssp ETTCC--------SCCCCCTTTSCTTHHHHCS-CHHHHHHHHHHHHHHHHSCCCEETTEECSSCCTT-------------
T ss_pred hcccC--------CccCCCccccCHHHHcCCC-CCceehhhhHHHHHHHHhCCCCCccccccccccc-------------
Confidence 76532 2234899999999987654 8999999999999999999988764211100000
Q ss_pred chhhhhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCC-CHHHHHHHHHHh
Q 006982 536 QLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERP-TMFEVYQFLRAI 586 (623)
Q Consensus 536 ~~~~~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RP-s~~ev~~~L~~i 586 (623)
.+. ......+..++..|+. .||++|| +++++...|..+
T Consensus 288 ------~~~------~~~~~~l~~li~~~l~-~dP~~R~~~~~~l~~~l~~~ 326 (681)
T 2pzi_A 288 ------DPV------LKTYDSYGRLLRRAID-PDPRQRFTTAEEMSAQLTGV 326 (681)
T ss_dssp ------CHH------HHHCHHHHHHHHHHTC-SSGGGSCSSHHHHHHHHHHH
T ss_pred ------ccc------cccCHHHHHHHhhhcc-CChhhCCCHHHHHHHHHHHH
Confidence 000 0001234455566776 9999999 567777777664
No 246
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=100.00 E-value=6.6e-34 Score=288.77 Aligned_cols=232 Identities=12% Similarity=0.092 Sum_probs=178.2
Q ss_pred ccCcccceeeccCccEEEEEEeC-CCcEEEEEEeccccc----cHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEE
Q 006982 305 NSFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQR----SEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVY 379 (623)
Q Consensus 305 ~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~----~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 379 (623)
++|...+.||+|+||.||+|... +++.||+|++..... ..+.+.+|++.+.+++||||+++++++.+.+..++||
T Consensus 31 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 110 (286)
T 3uqc_A 31 GRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLVVA 110 (286)
T ss_dssp TTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred CcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEEEE
Confidence 56888999999999999999975 489999999976532 2367899999999999999999999999999999999
Q ss_pred ecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCC
Q 006982 380 KHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNP 459 (623)
Q Consensus 380 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~ 459 (623)
||+++++|.+++.. . ....+..+++.|++.||+|||+. +|+||||||+|||+++++.+||++++
T Consensus 111 e~~~g~~L~~~l~~-----~-~~~~~~~~i~~ql~~aL~~lH~~---givH~Dikp~NIll~~~g~~kl~~~~------- 174 (286)
T 3uqc_A 111 EWIRGGSLQEVADT-----S-PSPVGAIRAMQSLAAAADAAHRA---GVALSIDHPSRVRVSIDGDVVLAYPA------- 174 (286)
T ss_dssp ECCCEEEHHHHHTT-----C-CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEEETTSCEEECSCC-------
T ss_pred EecCCCCHHHHHhc-----C-CChHHHHHHHHHHHHHHHHHHHC---CCccCCCCcccEEEcCCCCEEEEecc-------
Confidence 99999999999942 1 24456888999999999999999 99999999999999999999997432
Q ss_pred CCCcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCcccccccHHHHHHHHhccCchhh
Q 006982 460 IDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQD 539 (623)
Q Consensus 460 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 539 (623)
|++| ++.++|||||||++|||+||+.||.............. .... .
T Consensus 175 -----------------~~~~-------~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~~~~-----~~~~-~--- 221 (286)
T 3uqc_A 175 -----------------TMPD-------ANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLAPAER-----DTAG-Q--- 221 (286)
T ss_dssp -----------------CCTT-------CCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSEECCB-----CTTS-C---
T ss_pred -----------------ccCC-------CCchhHHHHHHHHHHHHHHCCCCCCcCCcchhhHHHHH-----Hhcc-C---
Confidence 3333 58899999999999999999999986543221100000 0000 0
Q ss_pred hhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHhhccc
Q 006982 540 AIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAIGERY 590 (623)
Q Consensus 540 ~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~L~~i~~~~ 590 (623)
.....-.....++++. .++.+|+. .||++| |+.|+++.|+++....
T Consensus 222 ~~~~~~~~~~~~~~l~---~li~~~l~-~dP~~R-s~~el~~~L~~~~~~~ 267 (286)
T 3uqc_A 222 PIEPADIDRDIPFQIS---AVAARSVQ-GDGGIR-SASTLLNLMQQATAVA 267 (286)
T ss_dssp BCCHHHHCTTSCHHHH---HHHHHHHC-TTSSCC-CHHHHHHHHHHHHC--
T ss_pred CCChhhcccCCCHHHH---HHHHHHcc-cCCccC-CHHHHHHHHHHHhccC
Confidence 0000000112333444 44456766 999999 9999999999987543
No 247
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=100.00 E-value=2.2e-35 Score=327.55 Aligned_cols=201 Identities=22% Similarity=0.346 Sum_probs=171.8
Q ss_pred ccCcccceeeccCccEEEEEEe-CCCcEEEEEEeccc--cccHHHHHHHHHHhCCCCCCCCcceeEEEEe------CCee
Q 006982 305 NSFSKNNIIGSGRTGTMYKALL-EDGTSLMVKRLQDS--QRSEKEFVAEMATLGSVKNRNLVPLLGFCMA------KKER 375 (623)
Q Consensus 305 ~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~------~~~~ 375 (623)
++|...+.||+|+||.||+|.. .+|..||+|++... ....+.+.+|++++.+++||||+++++++.. .+..
T Consensus 14 grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~~~ 93 (676)
T 3qa8_A 14 GPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLP 93 (676)
T ss_dssp ---CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTSSC
T ss_pred CCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCCeE
Confidence 6799999999999999999996 46899999998754 2345678999999999999999999998765 5677
Q ss_pred eEEEecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCC---eEEeecc
Q 006982 376 LLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFE---PKISDFG 452 (623)
Q Consensus 376 ~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~---~kl~Dfg 452 (623)
++||||+++|+|.+++..... ...+++..++.++.|++.||+|||+. +|+||||||+||+++.++. +||+|||
T Consensus 94 ~LVmEy~~ggsL~~~L~~~~~-~~~lse~~i~~I~~QLl~aL~yLHs~---gIVHrDLKP~NILl~~~g~~~~vKL~DFG 169 (676)
T 3qa8_A 94 LLAMEYCEGGDLRKYLNQFEN-CCGLKEGPIRTLLSDISSALRYLHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLG 169 (676)
T ss_dssp CCEEECCSSCBHHHHHHSSSC-TTCCCSSHHHHHHHHHHHHHHHHHHT---TBCCCCCCSTTEEEECCSSSCEEEECSCC
T ss_pred EEEEEeCCCCCHHHHHHhccc-CCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHeEeecCCCceeEEEcccc
Confidence 899999999999999975432 24689999999999999999999999 9999999999999997665 9999999
Q ss_pred cccccCCCCCcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCC
Q 006982 453 LARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVA 514 (623)
Q Consensus 453 la~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~~ 514 (623)
+++........ ....||+.|+|||++.+..++.++||||||+++|||++|+.||...
T Consensus 170 ~a~~~~~~~~~-----~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~ 226 (676)
T 3qa8_A 170 YAKELDQGELC-----TEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPN 226 (676)
T ss_dssp CCCBTTSCCCC-----CCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred ccccccccccc-----ccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCcc
Confidence 99876543221 2345899999999999999999999999999999999999999753
No 248
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=100.00 E-value=4.2e-33 Score=284.76 Aligned_cols=231 Identities=18% Similarity=0.249 Sum_probs=171.5
Q ss_pred ccCccc-ceeeccCccEEEEEEe-CCCcEEEEEEeccccccHHHHHHHHHHh-CCCCCCCCcceeEEEEe----CCeeeE
Q 006982 305 NSFSKN-NIIGSGRTGTMYKALL-EDGTSLMVKRLQDSQRSEKEFVAEMATL-GSVKNRNLVPLLGFCMA----KKERLL 377 (623)
Q Consensus 305 ~~f~~~-~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~e~~~l-~~l~h~niv~l~~~~~~----~~~~~l 377 (623)
++|... ++||+|+||.||++.. .+++.||+|++... ..+.+|++++ +..+||||+++++++.. ....++
T Consensus 17 ~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~----~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~l 92 (299)
T 3m2w_A 17 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC----PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLI 92 (299)
T ss_dssp GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEE
T ss_pred cchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEeccc----HHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCceEEE
Confidence 456655 7899999999999996 47899999998643 3566788877 55699999999999887 567899
Q ss_pred EEecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCC---CCCeEEeecccc
Q 006982 378 VYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDD---DFEPKISDFGLA 454 (623)
Q Consensus 378 V~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~---~~~~kl~Dfgla 454 (623)
||||+++|+|.+++.... ...+++..++.++.|++.||+|||+. +|+||||||+||+++. ++.+||+|||++
T Consensus 93 v~e~~~~~~L~~~l~~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a 167 (299)
T 3m2w_A 93 VMECLDGGELFSRIQDRG--DQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFGFA 167 (299)
T ss_dssp EECCCCSCBHHHHHHHCT--TCCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSTTCCEEECCCTTC
T ss_pred EEeecCCCcHHHHHHhcc--CCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEecCCCCCcEEEeccccc
Confidence 999999999999997542 24689999999999999999999999 9999999999999998 789999999998
Q ss_pred cccCCCCCcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCcccccccHHHHHHHHhcc
Q 006982 455 RLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSST 534 (623)
Q Consensus 455 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~~~~~~~~~~~l~~~~~~~~~~ 534 (623)
..... ..++.++|||||||++|||++|+.||............ ...
T Consensus 168 ~~~~~--------------------------~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~--------~~~ 213 (299)
T 3m2w_A 168 KETTG--------------------------EKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGM--------KTR 213 (299)
T ss_dssp EECTT--------------------------CGGGGHHHHHHHHHHHHHHHHSSCSCCC-------CCS--------CCS
T ss_pred ccccc--------------------------ccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhhhHHH--------HHH
Confidence 75421 23578999999999999999999999754322110000 000
Q ss_pred CchhhhhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHH
Q 006982 535 GQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQF 582 (623)
Q Consensus 535 ~~~~~~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~ 582 (623)
........+.......++++. .++..|+. .||++|||+.|+++.
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~---~li~~~l~-~dP~~Rps~~e~l~h 257 (299)
T 3m2w_A 214 IRMGQYEFPNPEWSEVSEEVK---MLIRNLLK-TEPTQRMTITEFMNH 257 (299)
T ss_dssp SCTTCCSSCHHHHTTSCHHHH---HHHHHHTC-SSTTTSCCHHHHHTS
T ss_pred HhhccccCCchhcccCCHHHH---HHHHHHcc-cChhhCCCHHHHhcC
Confidence 000000000000011233444 44446666 999999999999874
No 249
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=100.00 E-value=4.9e-34 Score=305.05 Aligned_cols=242 Identities=17% Similarity=0.213 Sum_probs=174.8
Q ss_pred hccCcccceeeccCccEEEEEEe-CCCcEEEEEEecccc----ccHHHHHHHHHHhCCCCC-CCC---------cceeEE
Q 006982 304 TNSFSKNNIIGSGRTGTMYKALL-EDGTSLMVKRLQDSQ----RSEKEFVAEMATLGSVKN-RNL---------VPLLGF 368 (623)
Q Consensus 304 ~~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~----~~~~~~~~e~~~l~~l~h-~ni---------v~l~~~ 368 (623)
+..|...++||+|+||.||+|.. .+|+.||||++.... ...+.+.+|+.++..++| +|. +.....
T Consensus 77 ~~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 156 (413)
T 3dzo_A 77 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL 156 (413)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEE
T ss_pred ceeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhh
Confidence 34577788999999999999994 579999999987332 235678999999999987 221 111111
Q ss_pred ------------EEe-----CCeeeEEEecCCCCCHhhhccCC---CCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCc
Q 006982 369 ------------CMA-----KKERLLVYKHMPNGSLYDLLHPA---DDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRI 428 (623)
Q Consensus 369 ------------~~~-----~~~~~lV~e~~~~gsL~~~l~~~---~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i 428 (623)
+.. ....+++|+++ +++|.+++... ......++|..++.++.|++.||+|||+. +|
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~i 232 (413)
T 3dzo_A 157 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY---GL 232 (413)
T ss_dssp EECCC---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHT---TE
T ss_pred cccCCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhC---Cc
Confidence 111 11235566654 68999988411 12345688999999999999999999999 99
Q ss_pred EecCCCCCceeeCCCCCeEEeecccccccCCCCCcccccccCCCCcccccCcccc----------cCCCCCcchhHHHHH
Q 006982 429 IHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYA----------RTLVATPKGDVYSFG 498 (623)
Q Consensus 429 ~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~----------~~~~~s~k~DV~sfG 498 (623)
+||||||+|||++.++.+||+|||+++..... .....| +.|+|||++ ....++.++||||||
T Consensus 233 iHrDiKp~NILl~~~~~~kL~DFG~a~~~~~~-------~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlG 304 (413)
T 3dzo_A 233 VHTYLRPVDIVLDQRGGVFLTGFEHLVRDGAS-------AVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLG 304 (413)
T ss_dssp ECSCCCGGGEEECTTCCEEECCGGGCEETTEE-------ECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHH
T ss_pred ccCCcccceEEEecCCeEEEEeccceeecCCc-------cccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHH
Confidence 99999999999999999999999999865431 223347 999999999 566688999999999
Q ss_pred HHHHHHHhCCCCCCCCCCcccccccHHHHHHHHhccCchhhhhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHH
Q 006982 499 TVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFE 578 (623)
Q Consensus 499 vil~elltg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~e 578 (623)
|++|||++|+.||......+.. ..++..+ ...++++.+ ++..|+. .||++||++.|
T Consensus 305 vil~elltg~~Pf~~~~~~~~~-----------------~~~~~~~---~~~~~~~~~---li~~~l~-~dP~~Rpt~~~ 360 (413)
T 3dzo_A 305 LAIYWIWCADLPNTDDAALGGS-----------------EWIFRSC---KNIPQPVRA---LLEGFLR-YPKEDRLLPLQ 360 (413)
T ss_dssp HHHHHHHHSSCCCCTTGGGSCS-----------------GGGGSSC---CCCCHHHHH---HHHHHTC-SSGGGSCCHHH
T ss_pred HHHHHHHHCCCCCCCcchhhhH-----------------HHHHhhc---ccCCHHHHH---HHHHHcc-CChhhCcCHHH
Confidence 9999999999999754322111 1111111 123344444 4446766 99999999777
Q ss_pred HHH
Q 006982 579 VYQ 581 (623)
Q Consensus 579 v~~ 581 (623)
+++
T Consensus 361 ~l~ 363 (413)
T 3dzo_A 361 AME 363 (413)
T ss_dssp HTT
T ss_pred HHh
Confidence 643
No 250
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=99.97 E-value=2e-33 Score=292.00 Aligned_cols=190 Identities=15% Similarity=0.125 Sum_probs=158.6
Q ss_pred hccCcccceeeccCccEEEEEEeCCCcEEEEEEecccc---------ccHHHHHHHHHHhCCCC---------CCCCcce
Q 006982 304 TNSFSKNNIIGSGRTGTMYKALLEDGTSLMVKRLQDSQ---------RSEKEFVAEMATLGSVK---------NRNLVPL 365 (623)
Q Consensus 304 ~~~f~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~---------~~~~~~~~e~~~l~~l~---------h~niv~l 365 (623)
.++|...+.||+|+||.||+|+. +|+.||+|++.... ...+.+.+|++++++++ ||||+++
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l 97 (336)
T 2vuw_A 19 TEKLQRCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGL 97 (336)
T ss_dssp HHHHHTCEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCE
T ss_pred cccchheeeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhh
Confidence 35688899999999999999998 68999999996532 23467888888887775 7788777
Q ss_pred eEEEE------------------------------eCCeeeEEEecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHH
Q 006982 366 LGFCM------------------------------AKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAAR 415 (623)
Q Consensus 366 ~~~~~------------------------------~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~ 415 (623)
.+.+. .....++||||+++|++.+.+.. ..+++..+..++.|++.
T Consensus 98 ~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~-----~~~~~~~~~~i~~qi~~ 172 (336)
T 2vuw_A 98 NSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT-----KLSSLATAKSILHQLTA 172 (336)
T ss_dssp EEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT-----TCCCHHHHHHHHHHHHH
T ss_pred cceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh-----cCCCHHHHHHHHHHHHH
Confidence 77643 25778999999999987777632 45899999999999999
Q ss_pred HHHHHH-hcCCCCcEecCCCCCceeeCCCC--------------------CeEEeecccccccCCCCCcccccccCCCCc
Q 006982 416 GFAWLH-HNCNPRIIHRNISSKCILLDDDF--------------------EPKISDFGLARLMNPIDTHLSTFVNGEFGD 474 (623)
Q Consensus 416 ~l~yLH-~~~~~~i~H~dlk~~NILl~~~~--------------------~~kl~Dfgla~~~~~~~~~~~~~~~~~~gt 474 (623)
||+||| +. +|+||||||+|||++.++ .+||+|||+++..... ...||
T Consensus 173 aL~~lH~~~---~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~---------~~~gt 240 (336)
T 2vuw_A 173 SLAVAEASL---RFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDG---------IVVFC 240 (336)
T ss_dssp HHHHHHHHH---CCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETT---------EEECC
T ss_pred HHHHHHHhC---CEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCC---------cEEEe
Confidence 999999 88 999999999999999887 8999999999876431 12489
Q ss_pred ccccCcccccCCCCCcchhHHHHHHH-HHHHHhCCCCCC
Q 006982 475 LGYVAPEYARTLVATPKGDVYSFGTV-LLELVTGERPTN 512 (623)
Q Consensus 475 ~~y~aPE~~~~~~~s~k~DV~sfGvi-l~elltg~~P~~ 512 (623)
+.|+|||++.+.. +.++||||+|++ .+++++|..||.
T Consensus 241 ~~y~aPE~~~g~~-~~~~Diwsl~~~~~~~~~~g~~p~~ 278 (336)
T 2vuw_A 241 DVSMDEDLFTGDG-DYQFDIYRLMKKENNNRWGEYHPYS 278 (336)
T ss_dssp CCTTCSGGGCCCS-SHHHHHHHHHHHHHTTCTTSCCTHH
T ss_pred ecccChhhhcCCC-ccceehhhhhCCCCcccccccCCCc
Confidence 9999999998766 899999998766 778888999874
No 251
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.95 E-value=5.1e-29 Score=275.74 Aligned_cols=183 Identities=16% Similarity=0.097 Sum_probs=127.7
Q ss_pred eeccCccEEEEEE-eCCCcEEEEEEeccc-----------cccHHHHHHHHHHhCCC-CCCCCcceeEEEEeCCeeeEEE
Q 006982 313 IGSGRTGTMYKAL-LEDGTSLMVKRLQDS-----------QRSEKEFVAEMATLGSV-KNRNLVPLLGFCMAKKERLLVY 379 (623)
Q Consensus 313 lG~G~~g~Vy~~~-~~~~~~vavK~~~~~-----------~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lV~ 379 (623)
.+.|++|.++.++ .--|..+++|.+... ....++|.+|+++|+++ .|+||++++++++++...||||
T Consensus 242 ~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLVM 321 (569)
T 4azs_A 242 PYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLVM 321 (569)
T ss_dssp -C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEEE
T ss_pred cccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEEE
Confidence 4556666665544 234788999998543 12345689999999999 7999999999999999999999
Q ss_pred ecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCC
Q 006982 380 KHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNP 459 (623)
Q Consensus 380 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~ 459 (623)
||++||+|.++|... ..++.. +|+.||+.||+|+|++ +|+||||||+|||+++++.+||+|||+|+....
T Consensus 322 Eyv~G~~L~d~i~~~----~~l~~~---~I~~QIl~AL~ylH~~---GIIHRDIKPeNILL~~dg~vKL~DFGlAr~~~~ 391 (569)
T 4azs_A 322 EKLPGRLLSDMLAAG----EEIDRE---KILGSLLRSLAALEKQ---GFWHDDVRPWNVMVDARQHARLIDFGSIVTTPQ 391 (569)
T ss_dssp ECCCSEEHHHHHHTT----CCCCHH---HHHHHHHHHHHHHHHT---TCEESCCCGGGEEECTTSCEEECCCTTEESCC-
T ss_pred ecCCCCcHHHHHHhC----CCCCHH---HHHHHHHHHHHHHHHC---CceeccCchHhEEECCCCCEEEeecccCeeCCC
Confidence 999999999999643 345543 5899999999999999 999999999999999999999999999987654
Q ss_pred CCCcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCC
Q 006982 460 IDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERP 510 (623)
Q Consensus 460 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P 510 (623)
....... ..||++|+|||++.+ .+..++|+||+|++++++.++..|
T Consensus 392 ~~~~~~t----~vGTp~YmAPE~l~g-~~~~~~d~~s~g~~~~~l~~~~~~ 437 (569)
T 4azs_A 392 DCSWPTN----LVQSFFVFVNELFAE-NKSWNGFWRSAPVHPFNLPQPWSN 437 (569)
T ss_dssp --CCSHH----HHHHHHHHHHHHC------------------CCCCTTHHH
T ss_pred CCccccC----ceechhhccHHHhCC-CCCCcccccccccchhhhccccch
Confidence 3322222 348999999999875 457789999999998887766544
No 252
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=99.93 E-value=8.1e-26 Score=232.24 Aligned_cols=163 Identities=33% Similarity=0.505 Sum_probs=148.3
Q ss_pred CCCHHHHHHHHHHHHHcCCCCCcccCCCCCCCCCCCCCCc--ccceeecCCC-CCcEEEEEecCCCcee--eCCccccCC
Q 006982 29 YGTKEDLACLKSIKDSLEDPFNYLNSSWNFNNDTEGFICK--FTGVECWHPD-ENRVLNLRLTDMGLKG--QFPRGIRNC 103 (623)
Q Consensus 29 ~~~~~d~~~Ll~~k~~~~~~~~~l~~sW~~~~~~~~~~c~--w~gv~c~~~~-~~~v~~l~l~~~~l~g--~~p~~l~~l 103 (623)
.|.++|++||++||+++.||. .+ .+|+.+. +||. |.||+|+... .++|+.|+|++++++| .+|+.++++
T Consensus 2 ~c~~~~~~aL~~~k~~~~~~~-~l-~~W~~~~----~~C~~~w~gv~C~~~~~~~~l~~L~L~~~~l~~~~~~~~~l~~l 75 (313)
T 1ogq_A 2 LCNPQDKQALLQIKKDLGNPT-TL-SSWLPTT----DCCNRTWLGVLCDTDTQTYRVNNLDLSGLNLPKPYPIPSSLANL 75 (313)
T ss_dssp CSCHHHHHHHHHHHHHTTCCG-GG-TTCCTTS----CTTTTCSTTEEECCSSSCCCEEEEEEECCCCSSCEECCGGGGGC
T ss_pred CCCHHHHHHHHHHHHhcCCcc-cc-cCCCCCC----CCCcCCCcceEeCCCCCCceEEEEECCCCCccCCcccChhHhCC
Confidence 578999999999999998876 44 5997533 4787 9999996422 2799999999999999 999999999
Q ss_pred CCCCEEEcCC-CCCCCCCChhHhhhcCCCCEEEccCccCCCCCCCCCCCCCCCceeeccCCcCCCCCCcccccccccccc
Q 006982 104 SSMTGLDLSS-NKLYGPLPDDISKLVGFLTSLDLSSNNFSGSIPSNLANCTYLNSLKLDHNRFSGQIPPQLGQLGRLKSF 182 (623)
Q Consensus 104 ~~L~~L~L~~-N~l~g~ip~~~~~l~~~L~~L~L~~N~l~g~ip~~~~~l~~L~~l~l~~N~~~g~iP~~l~~l~~L~~l 182 (623)
++|++|+|++ |.+.|.+|..++++.+ |++|+|++|+++|.+|..++++++|++|+|++|+++|.+|..++++++|+.|
T Consensus 76 ~~L~~L~L~~~n~l~~~~p~~l~~l~~-L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 154 (313)
T 1ogq_A 76 PYLNFLYIGGINNLVGPIPPAIAKLTQ-LHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGI 154 (313)
T ss_dssp TTCSEEEEEEETTEESCCCGGGGGCTT-CSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEE
T ss_pred CCCCeeeCCCCCcccccCChhHhcCCC-CCEEECcCCeeCCcCCHHHhCCCCCCEEeCCCCccCCcCChHHhcCCCCCeE
Confidence 9999999995 9999999999999755 9999999999999999999999999999999999999999999999999999
Q ss_pred ccccccccccCCcccc
Q 006982 183 SVANNLLSGSIPTFVN 198 (623)
Q Consensus 183 ~l~~N~l~g~ip~~~~ 198 (623)
+|++|+++|.+|..+.
T Consensus 155 ~L~~N~l~~~~p~~l~ 170 (313)
T 1ogq_A 155 TFDGNRISGAIPDSYG 170 (313)
T ss_dssp ECCSSCCEEECCGGGG
T ss_pred ECcCCcccCcCCHHHh
Confidence 9999999999997654
No 253
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.92 E-value=4.4e-26 Score=250.80 Aligned_cols=186 Identities=16% Similarity=0.166 Sum_probs=145.9
Q ss_pred ccceeeccCccEEEEEEeCCCcEEEEEEecccc---------ccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEE
Q 006982 309 KNNIIGSGRTGTMYKALLEDGTSLMVKRLQDSQ---------RSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVY 379 (623)
Q Consensus 309 ~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~---------~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 379 (623)
..++||+|+||.||++.. .+..+++|+..... ...+.+.+|++++.+++||||+++..++...+..++||
T Consensus 340 ~~~~LG~G~fg~Vy~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lVm 418 (540)
T 3en9_A 340 PEHLIGKGAEADIKRDSY-LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIMM 418 (540)
T ss_dssp --------CCEEEEEEEC-SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEEEE
T ss_pred CCCEEeeCCCEEEEEEEE-CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEEEE
Confidence 357899999999999955 47788888764321 11345889999999999999998777777888889999
Q ss_pred ecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCC
Q 006982 380 KHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNP 459 (623)
Q Consensus 380 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~ 459 (623)
||+++|+|.+++.. +..++.|++.||.|||++ +|+||||||+|||+++ .+||+|||+++....
T Consensus 419 E~~~ggsL~~~l~~------------~~~i~~qi~~aL~~LH~~---gIiHrDiKp~NILl~~--~~kL~DFGla~~~~~ 481 (540)
T 3en9_A 419 SYINGKLAKDVIED------------NLDIAYKIGEIVGKLHKN---DVIHNDLTTSNFIFDK--DLYIIDFGLGKISNL 481 (540)
T ss_dssp ECCCSEEHHHHSTT------------CTHHHHHHHHHHHHHHHT---TEECTTCCTTSEEESS--SEEECCCTTCEECCC
T ss_pred ECCCCCCHHHHHHH------------HHHHHHHHHHHHHHHHHC---cCccCCCCHHHEEECC--eEEEEECccCEECCC
Confidence 99999999999953 457999999999999999 9999999999999999 999999999998754
Q ss_pred CCCccc---ccccCCCCcccccCcccccC--CCCCcchhHHHHHHHHHHHHhCCCCCC
Q 006982 460 IDTHLS---TFVNGEFGDLGYVAPEYART--LVATPKGDVYSFGTVLLELVTGERPTN 512 (623)
Q Consensus 460 ~~~~~~---~~~~~~~gt~~y~aPE~~~~--~~~s~k~DV~sfGvil~elltg~~P~~ 512 (623)
...... .......||+.|+|||++.. ..|+..+|+|+..+-.++-+.++.+|.
T Consensus 482 ~~~~~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY~ 539 (540)
T 3en9_A 482 DEDKAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARYV 539 (540)
T ss_dssp HHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCCC
T ss_pred ccccccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhccccC
Confidence 221110 01112348999999999986 567888999999999999988887763
No 254
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=99.89 E-value=4.6e-24 Score=245.47 Aligned_cols=160 Identities=22% Similarity=0.323 Sum_probs=140.8
Q ss_pred CCCHHHHHHHHHHHHHcCCCCCcccCCCCCCC---CCCCCCCcc------------cceeecCCCCCcEEEEEecCCCce
Q 006982 29 YGTKEDLACLKSIKDSLEDPFNYLNSSWNFNN---DTEGFICKF------------TGVECWHPDENRVLNLRLTDMGLK 93 (623)
Q Consensus 29 ~~~~~d~~~Ll~~k~~~~~~~~~l~~sW~~~~---~~~~~~c~w------------~gv~c~~~~~~~v~~l~l~~~~l~ 93 (623)
++..+|+.||++||+++.+| +|+.+. ..+.++|+| .||+|+. .+||+.|+|++++|+
T Consensus 265 ~~~~~d~~ALl~~k~~l~~~------~W~~~~~~~~~~~~~C~W~~~~~~~~w~~~~GV~C~~--~~~V~~L~Ls~~~L~ 336 (876)
T 4ecn_A 265 AEYIKDYKALKAIWEALDGK------NWRYYSGTINNTIHSLNWNFNKELDMWGDQPGVDLDN--NGRVTGLSLAGFGAK 336 (876)
T ss_dssp CHHHHHHHHHHHHHHHTTGG------GCCCCCSSCSSCCCCCSCCCSSCGGGTTCCTTEEECT--TSCEEEEECTTTCCE
T ss_pred ccchHHHHHHHHHHHHcCCC------CCCcCCCcccccCCccccccccccccccCcCceEecC--CCCEEEEECccCCCC
Confidence 33467999999999999776 786543 122234999 9999965 589999999999999
Q ss_pred eeCCccccCCCCCCEEEc-CCCCCCCC-----------------------------------------------------
Q 006982 94 GQFPRGIRNCSSMTGLDL-SSNKLYGP----------------------------------------------------- 119 (623)
Q Consensus 94 g~~p~~l~~l~~L~~L~L-~~N~l~g~----------------------------------------------------- 119 (623)
|.+|++|++|++|+.|+| ++|.++|.
T Consensus 337 G~ip~~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~l~~~~l~~~~~~~~ 416 (876)
T 4ecn_A 337 GRVPDAIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSDLLQDAINRNPEMKP 416 (876)
T ss_dssp EEECGGGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHTCTTSCC
T ss_pred CcCchHHhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhHHHHHHhhhCccccc
Confidence 999999999999999999 77866555
Q ss_pred -----------------------CChhHhhhcCCCCEEEccCccCCC-----------------CCCCCCC--CCCCCce
Q 006982 120 -----------------------LPDDISKLVGFLTSLDLSSNNFSG-----------------SIPSNLA--NCTYLNS 157 (623)
Q Consensus 120 -----------------------ip~~~~~l~~~L~~L~L~~N~l~g-----------------~ip~~~~--~l~~L~~ 157 (623)
||.+++++.+ |++|+|++|+|+| .||..++ ++++|++
T Consensus 417 i~~~~~l~l~~l~l~~~~N~L~~IP~~l~~L~~-L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~~ 495 (876)
T 4ecn_A 417 IKKDSRISLKDTQIGNLTNRITFISKAIQRLTK-LQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTD 495 (876)
T ss_dssp CCCCCCCCCCTTTTTCCSCEEEEECGGGGGCTT-CCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCE
T ss_pred cccccccchhhceeccccCcccchhHHHhcCCC-CCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCCCE
Confidence 8999999755 9999999999999 4999998 9999999
Q ss_pred eeccCCcCCCCCCcccccccccccccccccc-ccc-cCCccc
Q 006982 158 LKLDHNRFSGQIPPQLGQLGRLKSFSVANNL-LSG-SIPTFV 197 (623)
Q Consensus 158 l~l~~N~~~g~iP~~l~~l~~L~~l~l~~N~-l~g-~ip~~~ 197 (623)
|+|++|++.|.+|..++++++|+.|+|++|+ |+| .+|..+
T Consensus 496 L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i 537 (876)
T 4ecn_A 496 VELYNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADW 537 (876)
T ss_dssp EEEESCTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHH
T ss_pred EECcCCCCCccChHHHhCCCCCCEEECcCCCCcccccchHHH
Confidence 9999999999999999999999999999998 999 888644
No 255
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=99.89 E-value=1.1e-23 Score=237.29 Aligned_cols=159 Identities=23% Similarity=0.317 Sum_probs=142.0
Q ss_pred CHHHHHHHHHHHHHcCCCCCcccC-------CCCCCCCCCCCCCcc---cceeecCCCCCcEEEEEecCCCceeeCCccc
Q 006982 31 TKEDLACLKSIKDSLEDPFNYLNS-------SWNFNNDTEGFICKF---TGVECWHPDENRVLNLRLTDMGLKGQFPRGI 100 (623)
Q Consensus 31 ~~~d~~~Ll~~k~~~~~~~~~l~~-------sW~~~~~~~~~~c~w---~gv~c~~~~~~~v~~l~l~~~~l~g~~p~~l 100 (623)
...|+.||.+||.++.++.+.... +|+.+. +||.| .||+|+. .+||+.|+|++++++|.+|++|
T Consensus 28 ~~~d~~aL~~~~~~~~~~~w~~~~~~~~~~~~W~~~~----~~c~w~~~~GV~C~~--~~~V~~L~L~~~~l~g~lp~~l 101 (636)
T 4eco_A 28 YIKDYLALKEIWDALNGKNWSQQGFGTQPGANWNFNK----ELDMWGAQPGVSLNS--NGRVTGLSLEGFGASGRVPDAI 101 (636)
T ss_dssp HHHHHHHHHHHHHHTTGGGCCCCC------CCCCCSS----CGGGTTCCTTEEECT--TCCEEEEECTTSCCEEEECGGG
T ss_pred HHHHHHHHHHHHHHcCCCCcccCCcCCccCCCCCCCC----CcccccCCCCeEEcC--CCCEEEEEecCcccCCcCChHH
Confidence 357999999999999877654332 797543 59999 9999965 3899999999999999999999
Q ss_pred cCCCCCCEEEcCCCC-----------------------------------------------------------------
Q 006982 101 RNCSSMTGLDLSSNK----------------------------------------------------------------- 115 (623)
Q Consensus 101 ~~l~~L~~L~L~~N~----------------------------------------------------------------- 115 (623)
++|++|++|+|++|.
T Consensus 102 ~~L~~L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~~~~l~l~l~~~~l~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~ 181 (636)
T 4eco_A 102 GQLTELEVLALGSHGEKVNERLFGPKGISANMSDEQKQKMRMHYQKTFVDYDPREDFSDLIKDCINSDPQQKSIKKSSRI 181 (636)
T ss_dssp GGCTTCCEEESCCGGGGGTCCSBSTTSBCTTCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHHCTTSCCCCCCCCC
T ss_pred hcCccceEEECcCCccccCCccccccccccCchHHHHHHHHhhHHHhhhccCchhhHHHHHHHHhhcCcccccccccccc
Confidence 999999999999984
Q ss_pred -------------CCCCCChhHhhhcCCCCEEEccCccCCCC-----------------CCCCCC--CCCCCceeeccCC
Q 006982 116 -------------LYGPLPDDISKLVGFLTSLDLSSNNFSGS-----------------IPSNLA--NCTYLNSLKLDHN 163 (623)
Q Consensus 116 -------------l~g~ip~~~~~l~~~L~~L~L~~N~l~g~-----------------ip~~~~--~l~~L~~l~l~~N 163 (623)
|+| ||.+++++.+ |++|+|++|+|+|. +|..++ ++++|++|+|++|
T Consensus 182 ~l~~l~l~~~~n~l~~-ip~~l~~l~~-L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n 259 (636)
T 4eco_A 182 TLKDTQIGQLSNNITF-VSKAVMRLTK-LRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNC 259 (636)
T ss_dssp CCCTTTTTCCSCEEEE-ECGGGGGCTT-CCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECC
T ss_pred chhhhhhccccCCCcc-CCHHHhcccC-CCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEecCC
Confidence 445 8999999755 99999999999996 999999 9999999999999
Q ss_pred cCCCCCCcccccccccccccccccc-ccc-cCCccc
Q 006982 164 RFSGQIPPQLGQLGRLKSFSVANNL-LSG-SIPTFV 197 (623)
Q Consensus 164 ~~~g~iP~~l~~l~~L~~l~l~~N~-l~g-~ip~~~ 197 (623)
+++|.+|..++++++|+.|+|++|+ ++| .+|..+
T Consensus 260 ~l~~~~p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~ 295 (636)
T 4eco_A 260 PNLTKLPTFLKALPEMQLINVACNRGISGEQLKDDW 295 (636)
T ss_dssp TTCSSCCTTTTTCSSCCEEECTTCTTSCHHHHHHHH
T ss_pred cCCccChHHHhcCCCCCEEECcCCCCCccccchHHH
Confidence 9999999999999999999999998 999 899754
No 256
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=99.88 E-value=5.1e-23 Score=237.02 Aligned_cols=160 Identities=30% Similarity=0.423 Sum_probs=125.4
Q ss_pred hccCCCHHHHHHHHHHHHHcCCCCCcccCCCCCCCCCCCCCCcccceeecCCCCCcEEEEEecCCCceee---CC-----
Q 006982 26 SLSYGTKEDLACLKSIKDSLEDPFNYLNSSWNFNNDTEGFICKFTGVECWHPDENRVLNLRLTDMGLKGQ---FP----- 97 (623)
Q Consensus 26 ~~~~~~~~d~~~Ll~~k~~~~~~~~~l~~sW~~~~~~~~~~c~w~gv~c~~~~~~~v~~l~l~~~~l~g~---~p----- 97 (623)
+.+.+.++|++||++||+++.||. .+ ++|+.+ .+||+|.||+|+ .++|+.|+|+++++.|. +|
T Consensus 5 ~~~~~~~~~~~all~~k~~~~~~~-~l-~~W~~~----~~~C~w~gv~C~---~~~v~~L~L~~~~l~g~~~~l~~~l~~ 75 (768)
T 3rgz_A 5 SPSQSLYREIHQLISFKDVLPDKN-LL-PDWSSN----KNPCTFDGVTCR---DDKVTSIDLSSKPLNVGFSAVSSSLLS 75 (768)
T ss_dssp ---CCHHHHHHHHHHHHTTCSCTT-SS-TTCCTT----SCGGGSTTEEEE---TTEEEEEECTTSCCCEEHHHHHHHTTT
T ss_pred ccccCCHHHHHHHHHHHhhCCCcc-cc-cCCCCC----CCCcCCcceEEC---CCcEEEEECCCCCcCCccCccChhHhc
Confidence 344557889999999999999887 55 699743 359999999996 58999999999999997 54
Q ss_pred ------------------ccccCCCCCCEEEcCCCCCCCCCCh--hHhhhcCCCCEEEccCccCCCCCCCCC-CCCCCCc
Q 006982 98 ------------------RGIRNCSSMTGLDLSSNKLYGPLPD--DISKLVGFLTSLDLSSNNFSGSIPSNL-ANCTYLN 156 (623)
Q Consensus 98 ------------------~~l~~l~~L~~L~L~~N~l~g~ip~--~~~~l~~~L~~L~L~~N~l~g~ip~~~-~~l~~L~ 156 (623)
+.++++++|++|||++|.++|.+|. .++++.+ |++|||++|.++|.+|..+ +++++|+
T Consensus 76 L~~L~~l~~~~~~~~~l~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~l~~l~~-L~~L~Ls~n~l~~~~~~~~~~~l~~L~ 154 (768)
T 3rgz_A 76 LTGLESLFLSNSHINGSVSGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSG-LKFLNVSSNTLDFPGKVSGGLKLNSLE 154 (768)
T ss_dssp CTTCCEEECTTSCEEECCCCCCCCTTCCEEECCSSEEEEEGGGGGGGGGCTT-CCEEECCSSEEECCSSCCSCCCCTTCS
T ss_pred cCcccccCCcCCCcCCCchhhccCCCCCEEECCCCcCCCcCCChHHHhCCCC-CCEEECcCCccCCcCCHHHhccCCCCC
Confidence 4677778888888888888888887 7887654 8888888888888888765 7788888
Q ss_pred eeeccCCcCCCCCCcc---ccccccccccccccccccccCCc
Q 006982 157 SLKLDHNRFSGQIPPQ---LGQLGRLKSFSVANNLLSGSIPT 195 (623)
Q Consensus 157 ~l~l~~N~~~g~iP~~---l~~l~~L~~l~l~~N~l~g~ip~ 195 (623)
+|+|++|+++|.+|.. ++++++|+.|++++|.++|.+|.
T Consensus 155 ~L~Ls~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~ 196 (768)
T 3rgz_A 155 VLDLSANSISGANVVGWVLSDGCGELKHLAISGNKISGDVDV 196 (768)
T ss_dssp EEECCSSCCEEETHHHHHHTTCCTTCCEEECCSSEEESCCBC
T ss_pred EEECCCCccCCcCChhhhhhccCCCCCEEECCCCcccccCCc
Confidence 8888888888777766 66667777777777777666654
No 257
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.87 E-value=8.3e-23 Score=206.17 Aligned_cols=152 Identities=14% Similarity=0.131 Sum_probs=122.7
Q ss_pred HHHHHHHhccCcccceeeccCccEEEEEEeCCCcEEEEEEeccccc-------------------cHHHHHHHHHHhCCC
Q 006982 297 LSDLMKATNSFSKNNIIGSGRTGTMYKALLEDGTSLMVKRLQDSQR-------------------SEKEFVAEMATLGSV 357 (623)
Q Consensus 297 ~~~l~~~~~~f~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~-------------------~~~~~~~e~~~l~~l 357 (623)
+..+......|...+.||+|+||.||+|...+|+.||+|.++.... ....+.+|++++.++
T Consensus 82 l~~~~~~~~~~~~~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l 161 (282)
T 1zar_A 82 LHRLVRSGKVDAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKL 161 (282)
T ss_dssp HHHHHHTTSCSEEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHhCCeEEEecCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhc
Confidence 3445555566778899999999999999997899999999964321 245688999999999
Q ss_pred CCCCCcceeEEEEeCCeeeEEEecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCc
Q 006982 358 KNRNLVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKC 437 (623)
Q Consensus 358 ~h~niv~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~N 437 (623)
+ | +++.+++.. +..++||||+++|+|.+ +.. .....++.|++.||.|||+. +|+||||||+|
T Consensus 162 ~--~-~~v~~~~~~-~~~~lvmE~~~g~~L~~-l~~----------~~~~~i~~qi~~~l~~lH~~---giiHrDlkp~N 223 (282)
T 1zar_A 162 Q--G-LAVPKVYAW-EGNAVLMELIDAKELYR-VRV----------ENPDEVLDMILEEVAKFYHR---GIVHGDLSQYN 223 (282)
T ss_dssp T--T-SSSCCEEEE-ETTEEEEECCCCEEGGG-CCC----------SCHHHHHHHHHHHHHHHHHT---TEECSCCSTTS
T ss_pred c--C-CCcCeEEec-cceEEEEEecCCCcHHH-cch----------hhHHHHHHHHHHHHHHHHHC---CCEeCCCCHHH
Confidence 8 5 666665543 55699999999999998 521 12347999999999999999 99999999999
Q ss_pred eeeCCCCCeEEeecccccccCCCCCcccccccCCCCcccccCccccc
Q 006982 438 ILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYAR 484 (623)
Q Consensus 438 ILl~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~ 484 (623)
||++ ++.+||+|||+++.. ..++|||++.
T Consensus 224 ILl~-~~~vkl~DFG~a~~~-----------------~~~~a~e~l~ 252 (282)
T 1zar_A 224 VLVS-EEGIWIIDFPQSVEV-----------------GEEGWREILE 252 (282)
T ss_dssp EEEE-TTEEEECCCTTCEET-----------------TSTTHHHHHH
T ss_pred EEEE-CCcEEEEECCCCeEC-----------------CCCCHHHHHH
Confidence 9999 999999999999743 3467888874
No 258
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.82 E-value=1.4e-21 Score=201.81 Aligned_cols=176 Identities=22% Similarity=0.318 Sum_probs=143.6
Q ss_pred CCCHHHHHHHHHHHHHc-CCCCCcccCCCCCCCCCCCCCCcccceeecC-------CCCCcEEEEEecCCCceeeCCccc
Q 006982 29 YGTKEDLACLKSIKDSL-EDPFNYLNSSWNFNNDTEGFICKFTGVECWH-------PDENRVLNLRLTDMGLKGQFPRGI 100 (623)
Q Consensus 29 ~~~~~d~~~Ll~~k~~~-~~~~~~l~~sW~~~~~~~~~~c~w~gv~c~~-------~~~~~v~~l~l~~~~l~g~~p~~l 100 (623)
.+..+|+.||++||.++ .|+...+ .+|........++|.|.|+.|.. ....+|+.|+|++|+++ .+|+.+
T Consensus 23 ~~~~~~~~aLl~~k~~~~~~~~~~~-~~w~~~~~~~~~~~~~~g~~~~~~~~~l~~~~~~~l~~L~L~~n~l~-~lp~~l 100 (328)
T 4fcg_A 23 TALRPYHDVLSQWQRHYNADRNRWH-SAWRQANSNNPQIETRTGRALKATADLLEDATQPGRVALELRSVPLP-QFPDQA 100 (328)
T ss_dssp CCCCCHHHHHHHHHHHHHHCCTTHH-HHHHHHTTTCTTSCCSHHHHHHHHHHHHHHHTSTTCCEEEEESSCCS-SCCSCG
T ss_pred ccCchHHHHHHHHHHhccCCchhhh-hhhcccccccccccccCCcchhhhHHHHhcccccceeEEEccCCCch-hcChhh
Confidence 34568999999999998 4665554 58953333445799999999942 12468999999999998 889999
Q ss_pred cCCCCCCEEEcCCCCCCCCCChhHhhhcCCCCEEEccCccCCCCCCCCCCCCCCCceeeccCCcCCCCCCccccc-----
Q 006982 101 RNCSSMTGLDLSSNKLYGPLPDDISKLVGFLTSLDLSSNNFSGSIPSNLANCTYLNSLKLDHNRFSGQIPPQLGQ----- 175 (623)
Q Consensus 101 ~~l~~L~~L~L~~N~l~g~ip~~~~~l~~~L~~L~L~~N~l~g~ip~~~~~l~~L~~l~l~~N~~~g~iP~~l~~----- 175 (623)
+++++|++|+|++|.++ .+|..++.+.+ |++|+|++|+++ .+|..++++++|++|+|++|++.|.+|..++.
T Consensus 101 ~~l~~L~~L~L~~n~l~-~lp~~~~~l~~-L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~L~~n~~~~~~p~~~~~~~~~~ 177 (328)
T 4fcg_A 101 FRLSHLQHMTIDAAGLM-ELPDTMQQFAG-LETLTLARNPLR-ALPASIASLNRLRELSIRACPELTELPEPLASTDASG 177 (328)
T ss_dssp GGGTTCSEEEEESSCCC-CCCSCGGGGTT-CSEEEEESCCCC-CCCGGGGGCTTCCEEEEEEETTCCCCCSCSEEEC-CC
T ss_pred hhCCCCCEEECCCCCcc-chhHHHhccCC-CCEEECCCCccc-cCcHHHhcCcCCCEEECCCCCCccccChhHhhccchh
Confidence 99999999999999999 99999998755 999999999999 89999999999999999999999999988765
Q ss_pred ----cccccccccccccccccCCcccc-c-cccccccCCCC
Q 006982 176 ----LGRLKSFSVANNLLSGSIPTFVN-L-TLSADSVTNNQ 210 (623)
Q Consensus 176 ----l~~L~~l~l~~N~l~g~ip~~~~-~-~~~~~~~~~n~ 210 (623)
+++|+.|+|++|+++ .+|..+. + .+....+.+|.
T Consensus 178 ~~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~ 217 (328)
T 4fcg_A 178 EHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSP 217 (328)
T ss_dssp CEEESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSC
T ss_pred hhccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCC
Confidence 999999999999998 7886543 1 23334444443
No 259
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=99.82 E-value=1.3e-20 Score=217.06 Aligned_cols=138 Identities=36% Similarity=0.549 Sum_probs=127.7
Q ss_pred EEecCCCceeeCCccccCCCCCCEEEcCCCCCCCCCChhHhhhcCCCCEEEccCccCCCCCCCCCCCCCCCceeeccCCc
Q 006982 85 LRLTDMGLKGQFPRGIRNCSSMTGLDLSSNKLYGPLPDDISKLVGFLTSLDLSSNNFSGSIPSNLANCTYLNSLKLDHNR 164 (623)
Q Consensus 85 l~l~~~~l~g~~p~~l~~l~~L~~L~L~~N~l~g~ip~~~~~l~~~L~~L~L~~N~l~g~ip~~~~~l~~L~~l~l~~N~ 164 (623)
+++..+.++|.+|..++++++|+.|||++|+++|.||.+++++.. |+.|+|++|+|+|.||..++++++|+.|||++|+
T Consensus 613 ~~l~~~~~~g~~~~~~~~l~~L~~LdLs~N~l~g~ip~~l~~l~~-L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~ 691 (768)
T 3rgz_A 613 CNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPY-LFILNLGHNDISGSIPDEVGDLRGLNILDLSSNK 691 (768)
T ss_dssp SCTTSCEEEEECCCSCSSSBCCCEEECCSSCCBSCCCGGGGGCTT-CCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSC
T ss_pred cccccceecccCchhhhccccccEEECcCCcccccCCHHHhcccc-CCEEeCcCCccCCCCChHHhCCCCCCEEECCCCc
Confidence 455668899999999999999999999999999999999999765 9999999999999999999999999999999999
Q ss_pred CCCCCCccccccccccccccccccccccCCccccc-cccccccCCCCCCCCCCCCCCCCC
Q 006982 165 FSGQIPPQLGQLGRLKSFSVANNLLSGSIPTFVNL-TLSADSVTNNQGLCGEPLDACKGT 223 (623)
Q Consensus 165 ~~g~iP~~l~~l~~L~~l~l~~N~l~g~ip~~~~~-~~~~~~~~~n~~l~~~~~~~c~~~ 223 (623)
++|.||..++++++|+.|+|++|+|+|.||....+ ++...+|.||+++||.|...|...
T Consensus 692 l~g~ip~~l~~l~~L~~L~ls~N~l~g~iP~~~~~~~~~~~~~~gN~~Lcg~~l~~C~~~ 751 (768)
T 3rgz_A 692 LDGRIPQAMSALTMLTEIDLSNNNLSGPIPEMGQFETFPPAKFLNNPGLCGYPLPRCDPS 751 (768)
T ss_dssp CEECCCGGGGGCCCCSEEECCSSEEEEECCSSSSGGGSCGGGGCSCTEEESTTSCCCCSC
T ss_pred ccCcCChHHhCCCCCCEEECcCCcccccCCCchhhccCCHHHhcCCchhcCCCCcCCCCC
Confidence 99999999999999999999999999999975433 677788999999999998888643
No 260
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.77 E-value=8.9e-19 Score=174.40 Aligned_cols=137 Identities=16% Similarity=0.158 Sum_probs=107.5
Q ss_pred cCcccceeeccCccEEEEEEe-CCCcE--EEEEEecccccc-------------------------HHHHHHHHHHhCCC
Q 006982 306 SFSKNNIIGSGRTGTMYKALL-EDGTS--LMVKRLQDSQRS-------------------------EKEFVAEMATLGSV 357 (623)
Q Consensus 306 ~f~~~~~lG~G~~g~Vy~~~~-~~~~~--vavK~~~~~~~~-------------------------~~~~~~e~~~l~~l 357 (623)
-|...+.||+|+||.||+|.. .+|+. ||+|+++..... ...+.+|++.+.++
T Consensus 48 ~~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l 127 (258)
T 1zth_A 48 ITAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERA 127 (258)
T ss_dssp EEEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHH
T ss_pred chhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHH
Confidence 356778999999999999997 68988 999987543111 13578899999999
Q ss_pred CCCCC--cceeEEEEeCCeeeEEEecCCC-C----CHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHH-hcCCCCcE
Q 006982 358 KNRNL--VPLLGFCMAKKERLLVYKHMPN-G----SLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLH-HNCNPRII 429 (623)
Q Consensus 358 ~h~ni--v~l~~~~~~~~~~~lV~e~~~~-g----sL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH-~~~~~~i~ 429 (623)
+|+++ ..++++ ...++||||+.+ | +|.++... .++.....++.|++.+|.||| +. +|+
T Consensus 128 ~~~~i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~~-------~~~~~~~~i~~qi~~~l~~lH~~~---giv 193 (258)
T 1zth_A 128 KEAGVSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGRE-------LKELDVEGIFNDVVENVKRLYQEA---ELV 193 (258)
T ss_dssp HHTTCCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGGG-------GGGSCHHHHHHHHHHHHHHHHHTS---CEE
T ss_pred HhCCCCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhhc-------cChHHHHHHHHHHHHHHHHHHHHC---CEE
Confidence 88864 333332 356899999942 4 67766521 234567889999999999999 87 999
Q ss_pred ecCCCCCceeeCCCCCeEEeecccccccC
Q 006982 430 HRNISSKCILLDDDFEPKISDFGLARLMN 458 (623)
Q Consensus 430 H~dlk~~NILl~~~~~~kl~Dfgla~~~~ 458 (623)
||||||+|||+++ .++|+|||++....
T Consensus 194 HrDlkp~NILl~~--~~~liDFG~a~~~~ 220 (258)
T 1zth_A 194 HADLSEYNIMYID--KVYFIDMGQAVTLR 220 (258)
T ss_dssp CSSCSTTSEEESS--SEEECCCTTCEETT
T ss_pred eCCCCHHHEEEcC--cEEEEECcccccCC
Confidence 9999999999998 99999999998653
No 261
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.76 E-value=2.9e-18 Score=167.47 Aligned_cols=149 Identities=23% Similarity=0.263 Sum_probs=125.9
Q ss_pred CCCCcccceeecCCC--------CCcEEEEEecCCCceeeCCccccCCCCCCEEEcCCCCCCCCCChh-HhhhcCCCCEE
Q 006982 64 GFICKFTGVECWHPD--------ENRVLNLRLTDMGLKGQFPRGIRNCSSMTGLDLSSNKLYGPLPDD-ISKLVGFLTSL 134 (623)
Q Consensus 64 ~~~c~w~gv~c~~~~--------~~~v~~l~l~~~~l~g~~p~~l~~l~~L~~L~L~~N~l~g~ip~~-~~~l~~~L~~L 134 (623)
.+.|+|++|.|.+.. ...++.|+|++|++++..|..++++++|+.|+|++|+|+ .+|.. +..+ ++|++|
T Consensus 16 ~~~Cs~~~v~c~~~~l~~ip~~~~~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~-~i~~~~~~~l-~~L~~L 93 (229)
T 3e6j_A 16 QCSCSGTTVDCRSKRHASVPAGIPTNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLG-ALPVGVFDSL-TQLTVL 93 (229)
T ss_dssp TCEEETTEEECTTSCCSSCCSCCCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTC-TTCCEE
T ss_pred CCEEeCCEeEccCCCcCccCCCCCCCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCC-CcChhhcccC-CCcCEE
Confidence 358999999997643 246889999999999999999999999999999999997 56655 4665 459999
Q ss_pred EccCccCCCCCCCCCCCCCCCceeeccCCcCCCCCCccccccccccccccccccccccCCcccc-c-cccccccCCCCCC
Q 006982 135 DLSSNNFSGSIPSNLANCTYLNSLKLDHNRFSGQIPPQLGQLGRLKSFSVANNLLSGSIPTFVN-L-TLSADSVTNNQGL 212 (623)
Q Consensus 135 ~L~~N~l~g~ip~~~~~l~~L~~l~l~~N~~~g~iP~~l~~l~~L~~l~l~~N~l~g~ip~~~~-~-~~~~~~~~~n~~l 212 (623)
+|++|+|++..|..+..+++|++|+|++|+|+ .+|..+..+++|+.|+|++|+|++..+..+. + .+....+.+|+..
T Consensus 94 ~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~ 172 (229)
T 3e6j_A 94 DLGTNQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFGNPWD 172 (229)
T ss_dssp ECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCBC
T ss_pred ECCCCcCCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCCcc
Confidence 99999999766666899999999999999999 8999999999999999999999977665443 1 4556677888877
Q ss_pred CCC
Q 006982 213 CGE 215 (623)
Q Consensus 213 ~~~ 215 (623)
|..
T Consensus 173 c~c 175 (229)
T 3e6j_A 173 CEC 175 (229)
T ss_dssp TTB
T ss_pred CCc
Confidence 753
No 262
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.74 E-value=5.2e-18 Score=164.62 Aligned_cols=151 Identities=21% Similarity=0.275 Sum_probs=130.0
Q ss_pred CCCCCcccceeecCCC--------CCcEEEEEecCCCceeeCCccccCCCCCCEEEcCCCCCCCCCChhHhhhcCCCCEE
Q 006982 63 EGFICKFTGVECWHPD--------ENRVLNLRLTDMGLKGQFPRGIRNCSSMTGLDLSSNKLYGPLPDDISKLVGFLTSL 134 (623)
Q Consensus 63 ~~~~c~w~gv~c~~~~--------~~~v~~l~l~~~~l~g~~p~~l~~l~~L~~L~L~~N~l~g~ip~~~~~l~~~L~~L 134 (623)
..|.|.|..|.|.+.. ...++.|+|++|++++..+..+..+++|+.|+|++|.+++..|..+..+. +|++|
T Consensus 7 ~~C~C~~~~v~c~~~~l~~iP~~l~~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~-~L~~L 85 (220)
T 2v9t_B 7 AACTCSNNIVDCRGKGLTEIPTNLPETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLR-SLNSL 85 (220)
T ss_dssp TTSEEETTEEECTTSCCSSCCSSCCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCS-SCCEE
T ss_pred CCCEECCCEEEcCCCCcCcCCCccCcCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCc-CCCEE
Confidence 4567899999997532 23689999999999998888999999999999999999988898998875 49999
Q ss_pred EccCccCCCCCCC-CCCCCCCCceeeccCCcCCCCCCccccccccccccccccccccccCCcccc-c-cccccccCCCCC
Q 006982 135 DLSSNNFSGSIPS-NLANCTYLNSLKLDHNRFSGQIPPQLGQLGRLKSFSVANNLLSGSIPTFVN-L-TLSADSVTNNQG 211 (623)
Q Consensus 135 ~L~~N~l~g~ip~-~~~~l~~L~~l~l~~N~~~g~iP~~l~~l~~L~~l~l~~N~l~g~ip~~~~-~-~~~~~~~~~n~~ 211 (623)
+|++|+|++ +|. .+..+++|++|+|++|++++..|..+..+++|+.|+|++|++++..|..+. + .+....+.+|+.
T Consensus 86 ~Ls~N~l~~-l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~ 164 (220)
T 2v9t_B 86 VLYGNKITE-LPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPF 164 (220)
T ss_dssp ECCSSCCCC-CCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCE
T ss_pred ECCCCcCCc-cCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCc
Confidence 999999994 555 578999999999999999998899999999999999999999998876544 2 455667888988
Q ss_pred CCCC
Q 006982 212 LCGE 215 (623)
Q Consensus 212 l~~~ 215 (623)
.|..
T Consensus 165 ~c~c 168 (220)
T 2v9t_B 165 ICDC 168 (220)
T ss_dssp ECSG
T ss_pred CCCC
Confidence 7753
No 263
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.74 E-value=3.9e-18 Score=165.53 Aligned_cols=152 Identities=18% Similarity=0.195 Sum_probs=129.9
Q ss_pred CCCCCcccceeecCCC--------CCcEEEEEecCCCceeeCCc-cccCCCCCCEEEcCCCCCCCCCChhHhhhcCCCCE
Q 006982 63 EGFICKFTGVECWHPD--------ENRVLNLRLTDMGLKGQFPR-GIRNCSSMTGLDLSSNKLYGPLPDDISKLVGFLTS 133 (623)
Q Consensus 63 ~~~~c~w~gv~c~~~~--------~~~v~~l~l~~~~l~g~~p~-~l~~l~~L~~L~L~~N~l~g~ip~~~~~l~~~L~~ 133 (623)
..|.|.|..+.|++.. ...++.|+|++|++++..|. .++++++|+.|+|++|.+++..|..+..+. +|++
T Consensus 7 ~~C~C~~~~l~~s~n~l~~iP~~~~~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~-~L~~ 85 (220)
T 2v70_A 7 EKCRCEGTTVDCSNQKLNKIPEHIPQYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGAS-GVNE 85 (220)
T ss_dssp TTCEEETTEEECCSSCCSSCCSCCCTTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCT-TCCE
T ss_pred CCCEECCCEeEeCCCCcccCccCCCCCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCC-CCCE
Confidence 4577899999997643 23567999999999998764 589999999999999999976666888865 4999
Q ss_pred EEccCccCCCCCCCCCCCCCCCceeeccCCcCCCCCCccccccccccccccccccccccCCcccc-c-cccccccCCCCC
Q 006982 134 LDLSSNNFSGSIPSNLANCTYLNSLKLDHNRFSGQIPPQLGQLGRLKSFSVANNLLSGSIPTFVN-L-TLSADSVTNNQG 211 (623)
Q Consensus 134 L~L~~N~l~g~ip~~~~~l~~L~~l~l~~N~~~g~iP~~l~~l~~L~~l~l~~N~l~g~ip~~~~-~-~~~~~~~~~n~~ 211 (623)
|+|++|++++..|..+.++++|++|+|++|++++..|..+..+++|+.|+|++|++++..|..+. + .+....+.+|+.
T Consensus 86 L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l 165 (220)
T 2v70_A 86 ILLTSNRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPF 165 (220)
T ss_dssp EECCSSCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCE
T ss_pred EECCCCccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCC
Confidence 99999999987777799999999999999999998899999999999999999999999887654 2 455667888887
Q ss_pred CCCC
Q 006982 212 LCGE 215 (623)
Q Consensus 212 l~~~ 215 (623)
.|..
T Consensus 166 ~c~c 169 (220)
T 2v70_A 166 NCNC 169 (220)
T ss_dssp ECSG
T ss_pred cCCC
Confidence 7753
No 264
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.74 E-value=1.4e-17 Score=160.05 Aligned_cols=152 Identities=25% Similarity=0.246 Sum_probs=124.0
Q ss_pred CCCCCcccceeecCCC--------CCcEEEEEecCCCceeeCCccccCCCCCCEEEcCCCCCCCCCChhHhhhcCCCCEE
Q 006982 63 EGFICKFTGVECWHPD--------ENRVLNLRLTDMGLKGQFPRGIRNCSSMTGLDLSSNKLYGPLPDDISKLVGFLTSL 134 (623)
Q Consensus 63 ~~~~c~w~gv~c~~~~--------~~~v~~l~l~~~~l~g~~p~~l~~l~~L~~L~L~~N~l~g~ip~~~~~l~~~L~~L 134 (623)
..|.|.|.+|.|+..+ ..+++.|+|++|++++..+..++++++|++|+|++|++++..+..+..+ ++|++|
T Consensus 3 ~~C~C~~~~v~c~~~~l~~~p~~~~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l-~~L~~L 81 (208)
T 2o6s_A 3 SRCSCSGTTVECYSQGRTSVPTGIPAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKL-TSLTYL 81 (208)
T ss_dssp TTCEEETTEEECCSSCCSSCCSCCCTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTC-TTCCEE
T ss_pred CCCEECCCEEEecCCCccCCCCCCCCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCC-CCcCEE
Confidence 3467999999997543 2468999999999998777778999999999999999995444445665 459999
Q ss_pred EccCccCCCCCCCCCCCCCCCceeeccCCcCCCCCCccccccccccccccccccccccCCcccc-c-cccccccCCCCCC
Q 006982 135 DLSSNNFSGSIPSNLANCTYLNSLKLDHNRFSGQIPPQLGQLGRLKSFSVANNLLSGSIPTFVN-L-TLSADSVTNNQGL 212 (623)
Q Consensus 135 ~L~~N~l~g~ip~~~~~l~~L~~l~l~~N~~~g~iP~~l~~l~~L~~l~l~~N~l~g~ip~~~~-~-~~~~~~~~~n~~l 212 (623)
+|++|++++..|..+.++++|++|+|++|++++..|..+.++++|+.|++++|++++..+..+. + ++....+.+|+..
T Consensus 82 ~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~ 161 (208)
T 2o6s_A 82 NLSTNQLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWD 161 (208)
T ss_dssp ECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBC
T ss_pred ECCCCcCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCCccEEEecCCCee
Confidence 9999999966556689999999999999999977677789999999999999999987665433 2 4556677888776
Q ss_pred CCC
Q 006982 213 CGE 215 (623)
Q Consensus 213 ~~~ 215 (623)
|..
T Consensus 162 ~~~ 164 (208)
T 2o6s_A 162 CTC 164 (208)
T ss_dssp CCT
T ss_pred cCC
Confidence 654
No 265
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.73 E-value=2.3e-18 Score=163.46 Aligned_cols=153 Identities=22% Similarity=0.249 Sum_probs=125.3
Q ss_pred CCCCCcccceeecCCC--------CCcEEEEEecCCCceeeCCc-cccCCCCCCEEEcCCCCCCCCCChhHhhhcCCCCE
Q 006982 63 EGFICKFTGVECWHPD--------ENRVLNLRLTDMGLKGQFPR-GIRNCSSMTGLDLSSNKLYGPLPDDISKLVGFLTS 133 (623)
Q Consensus 63 ~~~~c~w~gv~c~~~~--------~~~v~~l~l~~~~l~g~~p~-~l~~l~~L~~L~L~~N~l~g~ip~~~~~l~~~L~~ 133 (623)
..|.|.|+.+.|++.. ...++.|+|++|.+++..+. .++++++|++|+|++|+|++..|..+..+.+ |++
T Consensus 4 ~~C~C~~~~l~~s~~~l~~ip~~~~~~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~-L~~ 82 (192)
T 1w8a_A 4 AMCHCEGTTVDCTGRGLKEIPRDIPLHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASH-IQE 82 (192)
T ss_dssp TTSEEETTEEECTTSCCSSCCSCCCTTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTT-CCE
T ss_pred CCCEECCCEEEcCCCCcCcCccCCCCCCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCccc-CCE
Confidence 3467899999997643 23788999999999887775 4899999999999999999888999988754 999
Q ss_pred EEccCccCCCCCCCCCCCCCCCceeeccCCcCCCCCCccccccccccccccccccccccCCccccc-cccccccCCCCCC
Q 006982 134 LDLSSNNFSGSIPSNLANCTYLNSLKLDHNRFSGQIPPQLGQLGRLKSFSVANNLLSGSIPTFVNL-TLSADSVTNNQGL 212 (623)
Q Consensus 134 L~L~~N~l~g~ip~~~~~l~~L~~l~l~~N~~~g~iP~~l~~l~~L~~l~l~~N~l~g~ip~~~~~-~~~~~~~~~n~~l 212 (623)
|+|++|+|++..|..+.++++|++|+|++|+|++.+|..+..+++|+.|+|++|.|++..|-..-. .+....+.++...
T Consensus 83 L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~l~~~~~~l~~~~~~~~~~~ 162 (192)
T 1w8a_A 83 LQLGENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHLAWFAEWLRKKSLNGGAAR 162 (192)
T ss_dssp EECCSCCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGGGHHHHHHHHHHCCSGGGCB
T ss_pred EECCCCcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCcchHHHHHHHHcCCCCCCCC
Confidence 999999999888888999999999999999999999999999999999999999999987742111 1222344455555
Q ss_pred CCCC
Q 006982 213 CGEP 216 (623)
Q Consensus 213 ~~~~ 216 (623)
|+.|
T Consensus 163 C~~P 166 (192)
T 1w8a_A 163 CGAP 166 (192)
T ss_dssp BCSS
T ss_pred CCCC
Confidence 6544
No 266
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=99.72 E-value=3.9e-18 Score=174.84 Aligned_cols=136 Identities=31% Similarity=0.438 Sum_probs=94.1
Q ss_pred EEEEEecCCCceeeCCccccCCCCCCEEEcCCCCCCCCCChhHhhhcCCCCEEEccCccCCCCCCCCCCCCCCCceeecc
Q 006982 82 VLNLRLTDMGLKGQFPRGIRNCSSMTGLDLSSNKLYGPLPDDISKLVGFLTSLDLSSNNFSGSIPSNLANCTYLNSLKLD 161 (623)
Q Consensus 82 v~~l~l~~~~l~g~~p~~l~~l~~L~~L~L~~N~l~g~ip~~~~~l~~~L~~L~L~~N~l~g~ip~~~~~l~~L~~l~l~ 161 (623)
++.|+|++|.++|.+|..++.++ |+.|+|++|.+++.+|..+..+. +|+.|+|++|++++.+|. +..+++|++|+|+
T Consensus 176 L~~L~L~~N~l~~~~~~~~~~l~-L~~L~Ls~N~l~~~~~~~~~~l~-~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~Ls 252 (313)
T 1ogq_A 176 FTSMTISRNRLTGKIPPTFANLN-LAFVDLSRNMLEGDASVLFGSDK-NTQKIHLAKNSLAFDLGK-VGLSKNLNGLDLR 252 (313)
T ss_dssp CCEEECCSSEEEEECCGGGGGCC-CSEEECCSSEEEECCGGGCCTTS-CCSEEECCSSEECCBGGG-CCCCTTCCEEECC
T ss_pred CcEEECcCCeeeccCChHHhCCc-ccEEECcCCcccCcCCHHHhcCC-CCCEEECCCCceeeecCc-ccccCCCCEEECc
Confidence 34444444444444444444443 44444444444444444444443 366666666666655554 6777888888888
Q ss_pred CCcCCCCCCccccccccccccccccccccccCCccccc-cccccccCCCCCCCCCCCCCC
Q 006982 162 HNRFSGQIPPQLGQLGRLKSFSVANNLLSGSIPTFVNL-TLSADSVTNNQGLCGEPLDAC 220 (623)
Q Consensus 162 ~N~~~g~iP~~l~~l~~L~~l~l~~N~l~g~ip~~~~~-~~~~~~~~~n~~l~~~~~~~c 220 (623)
+|+++|.+|..++++++|+.|+|++|+++|.+|....+ ++....+.+|+.+||.|.+.|
T Consensus 253 ~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip~~~~l~~L~~l~l~~N~~lc~~p~~~C 312 (313)
T 1ogq_A 253 NNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQGGNLQRFDVSAYANNKCLCGSPLPAC 312 (313)
T ss_dssp SSCCEECCCGGGGGCTTCCEEECCSSEEEEECCCSTTGGGSCGGGTCSSSEEESTTSSCC
T ss_pred CCcccCcCChHHhcCcCCCEEECcCCcccccCCCCccccccChHHhcCCCCccCCCCCCC
Confidence 89998899999999999999999999999999986433 466778899999999988777
No 267
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.69 E-value=6.1e-17 Score=151.34 Aligned_cols=132 Identities=22% Similarity=0.212 Sum_probs=109.4
Q ss_pred CCCCCcccceeecCCC--------CCcEEEEEecCCCceeeCCccccCCCCCCEEEcCCCCCCCCCChhHhhhcCCCCEE
Q 006982 63 EGFICKFTGVECWHPD--------ENRVLNLRLTDMGLKGQFPRGIRNCSSMTGLDLSSNKLYGPLPDDISKLVGFLTSL 134 (623)
Q Consensus 63 ~~~~c~w~gv~c~~~~--------~~~v~~l~l~~~~l~g~~p~~l~~l~~L~~L~L~~N~l~g~ip~~~~~l~~~L~~L 134 (623)
..|.|+|++|.|.+.. ...++.|+|++|++++..+..++++++|++|+|++|.+++..|..+..+. +|++|
T Consensus 3 ~~C~C~~~~l~~~~~~l~~~p~~~~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~-~L~~L 81 (177)
T 2o6r_A 3 SRCSCSGTEIRCNSKGLTSVPTGIPSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLT-KLTIL 81 (177)
T ss_dssp TTCEEETTEEECCSSCCSSCCTTCCTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCT-TCCEE
T ss_pred CCCEeCCCEEEecCCCCccCCCCCCCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCC-ccCEE
Confidence 3467899999997533 24688999999999987777789999999999999999954444456654 59999
Q ss_pred EccCccCCCCCCCCCCCCCCCceeeccCCcCCCCCCccccccccccccccccccccccCCc
Q 006982 135 DLSSNNFSGSIPSNLANCTYLNSLKLDHNRFSGQIPPQLGQLGRLKSFSVANNLLSGSIPT 195 (623)
Q Consensus 135 ~L~~N~l~g~ip~~~~~l~~L~~l~l~~N~~~g~iP~~l~~l~~L~~l~l~~N~l~g~ip~ 195 (623)
+|++|++++..|..+.++++|++|+|++|++++..+..+..+++|+.|+|++|.+++..|.
T Consensus 82 ~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~ 142 (177)
T 2o6r_A 82 YLHENKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPR 142 (177)
T ss_dssp ECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCHHH
T ss_pred ECCCCCccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeeccCcc
Confidence 9999999976666789999999999999999965555568899999999999999998874
No 268
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.62 E-value=8.7e-16 Score=145.63 Aligned_cols=134 Identities=31% Similarity=0.377 Sum_probs=93.5
Q ss_pred CCCCcccceeecCCCCCcEEEEEecCCCceeeCCccccCCCCCCEEEcCCCCCCCCCChhHhhhcCCCCEEEccCccCCC
Q 006982 64 GFICKFTGVECWHPDENRVLNLRLTDMGLKGQFPRGIRNCSSMTGLDLSSNKLYGPLPDDISKLVGFLTSLDLSSNNFSG 143 (623)
Q Consensus 64 ~~~c~w~gv~c~~~~~~~v~~l~l~~~~l~g~~p~~l~~l~~L~~L~L~~N~l~g~ip~~~~~l~~~L~~L~L~~N~l~g 143 (623)
.|.|.|..|.|+ +++++ .+|..+. ++|+.|+|++|+++ .+|..+..+.. |+.|+|++|++++
T Consensus 7 ~C~C~~~~l~~~-------------~~~l~-~ip~~~~--~~l~~L~L~~n~i~-~ip~~~~~l~~-L~~L~Ls~N~i~~ 68 (193)
T 2wfh_A 7 ECTCLDTVVRCS-------------NKGLK-VLPKGIP--RDVTELYLDGNQFT-LVPKELSNYKH-LTLIDLSNNRIST 68 (193)
T ss_dssp TCEEETTEEECT-------------TSCCS-SCCSCCC--TTCCEEECCSSCCC-SCCGGGGGCTT-CCEEECCSSCCCC
T ss_pred CCEeCCCEEEcC-------------CCCCC-cCCCCCC--CCCCEEECCCCcCc-hhHHHhhcccC-CCEEECCCCcCCE
Confidence 355666666663 44444 4565543 57888888888887 77777777544 8888888888886
Q ss_pred CCCCCCCCCCCCceeeccCCcCCCCCCccccccccccccccccccccccCCcccc-c-cccccccCCCCCCCCC
Q 006982 144 SIPSNLANCTYLNSLKLDHNRFSGQIPPQLGQLGRLKSFSVANNLLSGSIPTFVN-L-TLSADSVTNNQGLCGE 215 (623)
Q Consensus 144 ~ip~~~~~l~~L~~l~l~~N~~~g~iP~~l~~l~~L~~l~l~~N~l~g~ip~~~~-~-~~~~~~~~~n~~l~~~ 215 (623)
..|..|.++++|++|+|++|++++..|..+..+++|+.|+|++|++++..+..+. + .+....+.+|+..|..
T Consensus 69 i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C~c 142 (193)
T 2wfh_A 69 LSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYCDC 142 (193)
T ss_dssp CCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEECSG
T ss_pred eCHhHccCCCCCCEEECCCCccCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCeecCC
Confidence 6666788888888888888888876667788888888888888888765554332 2 3455567777776653
No 269
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.62 E-value=2.2e-15 Score=149.11 Aligned_cols=130 Identities=23% Similarity=0.240 Sum_probs=103.9
Q ss_pred CcEEEEEecCCCceeeCCccccCCCCCCEEEcCCCCCCCCCChhHhhhcCCCCEEEccCccCCCCCCCCCCCCCCCceee
Q 006982 80 NRVLNLRLTDMGLKGQFPRGIRNCSSMTGLDLSSNKLYGPLPDDISKLVGFLTSLDLSSNNFSGSIPSNLANCTYLNSLK 159 (623)
Q Consensus 80 ~~v~~l~l~~~~l~g~~p~~l~~l~~L~~L~L~~N~l~g~ip~~~~~l~~~L~~L~L~~N~l~g~ip~~~~~l~~L~~l~ 159 (623)
..++.|+|++|++++..|..++++++|++|+|++|.+++..|..+..+. +|++|+|++|++++..|..+..+++|++|+
T Consensus 35 ~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~-~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 113 (251)
T 3m19_A 35 ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLT-ELGTLGLANNQLASLPLGVFDHLTQLDKLY 113 (251)
T ss_dssp TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCT-TCCEEECTTSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCC-cCCEEECCCCcccccChhHhcccCCCCEEE
Confidence 3578899999999998888899999999999999999977776677764 499999999999976667788899999999
Q ss_pred ccCCcCCCCCCccccccccccccccccccccccCCcccc-c-cccccccCCCC
Q 006982 160 LDHNRFSGQIPPQLGQLGRLKSFSVANNLLSGSIPTFVN-L-TLSADSVTNNQ 210 (623)
Q Consensus 160 l~~N~~~g~iP~~l~~l~~L~~l~l~~N~l~g~ip~~~~-~-~~~~~~~~~n~ 210 (623)
|++|++++..|..+..+++|+.|+|++|++++..|..+. + ++....+.+|.
T Consensus 114 L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~ 166 (251)
T 3m19_A 114 LGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQ 166 (251)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred cCCCcCCCcChhHhccCCcccEEECcCCcCCccCHHHcCcCcCCCEEECCCCc
Confidence 999999966666678899999999999999877664433 1 34444555553
No 270
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.60 E-value=2.9e-15 Score=155.21 Aligned_cols=138 Identities=15% Similarity=0.164 Sum_probs=101.5
Q ss_pred ccCcccceeeccCccEEEEEEeCCCcEEEEEEeccccc---------------cHHH--------HHHHHHHhCCCCCCC
Q 006982 305 NSFSKNNIIGSGRTGTMYKALLEDGTSLMVKRLQDSQR---------------SEKE--------FVAEMATLGSVKNRN 361 (623)
Q Consensus 305 ~~f~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~---------------~~~~--------~~~e~~~l~~l~h~n 361 (623)
.-|.+.+.||+|++|.||+|...+|+.||+|+++.... .... ...|...|.++.+..
T Consensus 95 ~iY~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~g 174 (397)
T 4gyi_A 95 DVYSVGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEG 174 (397)
T ss_dssp SCSEEEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CEEEecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcC
Confidence 34889999999999999999999999999998753210 0111 234666666665444
Q ss_pred CcceeEEEEeCCeeeEEEecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeC
Q 006982 362 LVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLD 441 (623)
Q Consensus 362 iv~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~ 441 (623)
+....-+.. ...++||||+++++|.++... .....++.|++.+|.|||+. +|+||||||.|||++
T Consensus 175 v~vp~p~~~--~~~~LVME~i~G~~L~~l~~~----------~~~~~l~~qll~~l~~lH~~---gIVHrDLKp~NILl~ 239 (397)
T 4gyi_A 175 FPVPEPIAQ--SRHTIVMSLVDALPMRQVSSV----------PDPASLYADLIALILRLAKH---GLIHGDFNEFNILIR 239 (397)
T ss_dssp CSCCCEEEE--ETTEEEEECCSCEEGGGCCCC----------SCHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEEE
T ss_pred CCCCeeeec--cCceEEEEecCCccHhhhccc----------HHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHEEEe
Confidence 322222222 234799999999998776521 12356789999999999998 999999999999998
Q ss_pred CCC----------CeEEeeccccccc
Q 006982 442 DDF----------EPKISDFGLARLM 457 (623)
Q Consensus 442 ~~~----------~~kl~Dfgla~~~ 457 (623)
+++ .+.|+||+-+...
T Consensus 240 ~dgd~~d~~~~~~~~~iID~~Q~V~~ 265 (397)
T 4gyi_A 240 EEKDAEDPSSITLTPIIIXFPQMVSM 265 (397)
T ss_dssp EEECSSCTTSEEEEEEECCCTTCEET
T ss_pred CCCCcccccccccceEEEEeCCcccC
Confidence 876 3899999977654
No 271
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.59 E-value=2.5e-15 Score=142.31 Aligned_cols=128 Identities=25% Similarity=0.357 Sum_probs=110.0
Q ss_pred EEEEecCCCceeeCCccccCCCCCCEEEcCCCCCCCCCChh-HhhhcCCCCEEEccCccCCCCCCCCCCCCCCCceeecc
Q 006982 83 LNLRLTDMGLKGQFPRGIRNCSSMTGLDLSSNKLYGPLPDD-ISKLVGFLTSLDLSSNNFSGSIPSNLANCTYLNSLKLD 161 (623)
Q Consensus 83 ~~l~l~~~~l~g~~p~~l~~l~~L~~L~L~~N~l~g~ip~~-~~~l~~~L~~L~L~~N~l~g~ip~~~~~l~~L~~l~l~ 161 (623)
..|+++++++ +.+|..+.. +|+.|+|++|++++..|.. +..+. +|++|+|++|+|++.+|..|+++++|++|+|+
T Consensus 11 ~~l~~s~~~l-~~ip~~~~~--~l~~L~l~~n~i~~~~~~~~~~~l~-~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls 86 (192)
T 1w8a_A 11 TTVDCTGRGL-KEIPRDIPL--HTTELLLNDNELGRISSDGLFGRLP-HLVKLELKRNQLTGIEPNAFEGASHIQELQLG 86 (192)
T ss_dssp TEEECTTSCC-SSCCSCCCT--TCSEEECCSCCCCSBCCSCSGGGCT-TCCEEECCSSCCCCBCTTTTTTCTTCCEEECC
T ss_pred CEEEcCCCCc-CcCccCCCC--CCCEEECCCCcCCccCCccccccCC-CCCEEECCCCCCCCcCHhHcCCcccCCEEECC
Confidence 4689999999 578887754 9999999999999655543 77764 59999999999999889999999999999999
Q ss_pred CCcCCCCCCccccccccccccccccccccccCCcccc-c-cccccccCCCCCCCC
Q 006982 162 HNRFSGQIPPQLGQLGRLKSFSVANNLLSGSIPTFVN-L-TLSADSVTNNQGLCG 214 (623)
Q Consensus 162 ~N~~~g~iP~~l~~l~~L~~l~l~~N~l~g~ip~~~~-~-~~~~~~~~~n~~l~~ 214 (623)
+|+|++..|..+..+++|+.|+|++|++++.+|..+. + .+....+.+|+..|.
T Consensus 87 ~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~ 141 (192)
T 1w8a_A 87 ENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCN 141 (192)
T ss_dssp SCCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCS
T ss_pred CCcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCc
Confidence 9999998888899999999999999999999997654 2 455667788887664
No 272
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.59 E-value=3.4e-15 Score=149.48 Aligned_cols=113 Identities=23% Similarity=0.260 Sum_probs=81.2
Q ss_pred cEEEEEecCCCceeeCCccccCCCCCCEEEcCCCCCCCCCChhH-hhhcCCCCEEEccCccCCCCCCCCCCCCCCCceee
Q 006982 81 RVLNLRLTDMGLKGQFPRGIRNCSSMTGLDLSSNKLYGPLPDDI-SKLVGFLTSLDLSSNNFSGSIPSNLANCTYLNSLK 159 (623)
Q Consensus 81 ~v~~l~l~~~~l~g~~p~~l~~l~~L~~L~L~~N~l~g~ip~~~-~~l~~~L~~L~L~~N~l~g~ip~~~~~l~~L~~l~ 159 (623)
.++.|+|++|++++..+..++++++|++|+|++|.++ .+|..+ ..+ ++|++|+|++|++++..|..+.++++|++|+
T Consensus 38 ~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~-~i~~~~~~~l-~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 115 (270)
T 2o6q_A 38 DTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQ-TLPAGIFKEL-KNLETLWVTDNKLQALPIGVFDQLVNLAELR 115 (270)
T ss_dssp TCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCS-CCCTTTTSSC-TTCCEEECCSSCCCCCCTTTTTTCSSCCEEE
T ss_pred CCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccC-eeChhhhcCC-CCCCEEECCCCcCCcCCHhHcccccCCCEEE
Confidence 3567777777777666667778888888888888877 455554 444 4488888888888755455567778888888
Q ss_pred ccCCcCCCCCCccccccccccccccccccccccCCc
Q 006982 160 LDHNRFSGQIPPQLGQLGRLKSFSVANNLLSGSIPT 195 (623)
Q Consensus 160 l~~N~~~g~iP~~l~~l~~L~~l~l~~N~l~g~ip~ 195 (623)
|++|++++..|..++++++|+.|+|++|.+++..+.
T Consensus 116 l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~ 151 (270)
T 2o6q_A 116 LDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKG 151 (270)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTT
T ss_pred CCCCccCeeCHHHhCcCcCCCEEECCCCcCCccCHh
Confidence 888888776666677778888888888877765544
No 273
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.58 E-value=6.4e-15 Score=145.78 Aligned_cols=134 Identities=20% Similarity=0.206 Sum_probs=114.3
Q ss_pred CcEEEEEecCCCceeeCCccccCCCCCCEEEcCCCCCCCCCChhHhhhcCCCCEEEccCccCCCCCCCCCCCCCCCceee
Q 006982 80 NRVLNLRLTDMGLKGQFPRGIRNCSSMTGLDLSSNKLYGPLPDDISKLVGFLTSLDLSSNNFSGSIPSNLANCTYLNSLK 159 (623)
Q Consensus 80 ~~v~~l~l~~~~l~g~~p~~l~~l~~L~~L~L~~N~l~g~ip~~~~~l~~~L~~L~L~~N~l~g~ip~~~~~l~~L~~l~ 159 (623)
.+++.|+|++|.+++..|..+.++++|++|+|++|++++..|..+..+ ++|++|+|++|++++..|..+.++++|++|+
T Consensus 59 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l-~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 137 (251)
T 3m19_A 59 TKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLPLGVFDHL-TQLDKLYLGGNQLKSLPSGVFDRLTKLKELR 137 (251)
T ss_dssp TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTC-TTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred ccCCEEECCCCcCCccCHhHhccCCcCCEEECCCCcccccChhHhccc-CCCCEEEcCCCcCCCcChhHhccCCcccEEE
Confidence 578999999999999888889999999999999999996555566675 4599999999999966556689999999999
Q ss_pred ccCCcCCCCCCccccccccccccccccccccccCCcccc-c-cccccccCCCCCCCC
Q 006982 160 LDHNRFSGQIPPQLGQLGRLKSFSVANNLLSGSIPTFVN-L-TLSADSVTNNQGLCG 214 (623)
Q Consensus 160 l~~N~~~g~iP~~l~~l~~L~~l~l~~N~l~g~ip~~~~-~-~~~~~~~~~n~~l~~ 214 (623)
|++|++++..|..++.+++|+.|+|++|++++..|..+. + ++....+.+|+..|.
T Consensus 138 Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 194 (251)
T 3m19_A 138 LNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFDCS 194 (251)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCTT
T ss_pred CcCCcCCccCHHHcCcCcCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCceeCC
Confidence 999999976666899999999999999999988775543 2 455667788887664
No 274
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.58 E-value=7.6e-15 Score=147.08 Aligned_cols=135 Identities=21% Similarity=0.181 Sum_probs=91.0
Q ss_pred CcEEEEEecCCCceeeCCccccCCCCCCEEEcCCCCCCCCCChhHhhhcCCCCEEEccCccCCCCCCCCCCCCCCCceee
Q 006982 80 NRVLNLRLTDMGLKGQFPRGIRNCSSMTGLDLSSNKLYGPLPDDISKLVGFLTSLDLSSNNFSGSIPSNLANCTYLNSLK 159 (623)
Q Consensus 80 ~~v~~l~l~~~~l~g~~p~~l~~l~~L~~L~L~~N~l~g~ip~~~~~l~~~L~~L~L~~N~l~g~ip~~~~~l~~L~~l~ 159 (623)
.++..|+|++|.+++..+..++++++|++|+|++|++++..|..+..+. +|++|+|++|++++..|..++++++|++|+
T Consensus 85 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~-~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 163 (272)
T 3rfs_A 85 TNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLT-NLTYLNLAHNQLQSLPKGVFDKLTNLTELD 163 (272)
T ss_dssp TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCT-TCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCCEEECCCCccCccChhHhcCCcCCCEEECCCCcCCccCHHHhccCC-CCCEEECCCCccCccCHHHhccCccCCEEE
Confidence 3567777777777766666677777777777777777755444455644 377777777777755555567777777777
Q ss_pred ccCCcCCCCCCccccccccccccccccccccccCCcccc-c-cccccccCCCCCCCCC
Q 006982 160 LDHNRFSGQIPPQLGQLGRLKSFSVANNLLSGSIPTFVN-L-TLSADSVTNNQGLCGE 215 (623)
Q Consensus 160 l~~N~~~g~iP~~l~~l~~L~~l~l~~N~l~g~ip~~~~-~-~~~~~~~~~n~~l~~~ 215 (623)
|++|++++..|..++.+++|+.|++++|++++..|..+. + .+....+.+|+..|..
T Consensus 164 l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~ 221 (272)
T 3rfs_A 164 LSYNQLQSLPEGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTC 221 (272)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCT
T ss_pred CCCCCcCccCHHHhcCCccCCEEECCCCcCCccCHHHHhCCcCCCEEEccCCCccccC
Confidence 777777766566667777777777777777776665432 1 3445556666655543
No 275
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.57 E-value=3.7e-15 Score=153.59 Aligned_cols=130 Identities=20% Similarity=0.272 Sum_probs=100.7
Q ss_pred CcEEEEEecCCCceeeCCccccC---------CCCCCEEEcCCCCCCCCCChhHhhhcCCCCEEEccCccCCCCCCCCCC
Q 006982 80 NRVLNLRLTDMGLKGQFPRGIRN---------CSSMTGLDLSSNKLYGPLPDDISKLVGFLTSLDLSSNNFSGSIPSNLA 150 (623)
Q Consensus 80 ~~v~~l~l~~~~l~g~~p~~l~~---------l~~L~~L~L~~N~l~g~ip~~~~~l~~~L~~L~L~~N~l~g~ip~~~~ 150 (623)
.++..|+|++|++.|.+|..++. +++|+.|+|++|.++ .+|..++.+.+ |++|+|++|++++ +|..++
T Consensus 150 ~~L~~L~L~~n~~~~~~p~~~~~~~~~~~~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~-L~~L~L~~N~l~~-l~~~l~ 226 (328)
T 4fcg_A 150 NRLRELSIRACPELTELPEPLASTDASGEHQGLVNLQSLRLEWTGIR-SLPASIANLQN-LKSLKIRNSPLSA-LGPAIH 226 (328)
T ss_dssp TTCCEEEEEEETTCCCCCSCSEEEC-CCCEEESTTCCEEEEEEECCC-CCCGGGGGCTT-CCEEEEESSCCCC-CCGGGG
T ss_pred cCCCEEECCCCCCccccChhHhhccchhhhccCCCCCEEECcCCCcC-cchHhhcCCCC-CCEEEccCCCCCc-Cchhhc
Confidence 46788888888888888887765 888888888888888 78888877654 8888888888884 677788
Q ss_pred CCCCCceeeccCCcCCCCCCccccccccccccccccccccccCCcccc-c-cccccccCCCCCC
Q 006982 151 NCTYLNSLKLDHNRFSGQIPPQLGQLGRLKSFSVANNLLSGSIPTFVN-L-TLSADSVTNNQGL 212 (623)
Q Consensus 151 ~l~~L~~l~l~~N~~~g~iP~~l~~l~~L~~l~l~~N~l~g~ip~~~~-~-~~~~~~~~~n~~l 212 (623)
++++|++|+|++|++.+.+|..++.+++|+.|+|++|++.+.+|..+. + .+....+++|+.+
T Consensus 227 ~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~ 290 (328)
T 4fcg_A 227 HLPKLEELDLRGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNL 290 (328)
T ss_dssp GCTTCCEEECTTCTTCCBCCCCTTCCCCCCEEECTTCTTCCBCCTTGGGCTTCCEEECTTCTTC
T ss_pred cCCCCCEEECcCCcchhhhHHHhcCCCCCCEEECCCCCchhhcchhhhcCCCCCEEeCCCCCch
Confidence 888888888888888888888888888888888888888888886543 1 3444556666543
No 276
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.57 E-value=4.2e-15 Score=166.77 Aligned_cols=154 Identities=19% Similarity=0.196 Sum_probs=114.3
Q ss_pred CCCCCCCCCCCCCccc----ceeecCCC--------CCcEEEEEecCCCceeeCCccccCCCCCCEEEcCCCCCCCCCCh
Q 006982 55 SWNFNNDTEGFICKFT----GVECWHPD--------ENRVLNLRLTDMGLKGQFPRGIRNCSSMTGLDLSSNKLYGPLPD 122 (623)
Q Consensus 55 sW~~~~~~~~~~c~w~----gv~c~~~~--------~~~v~~l~l~~~~l~g~~p~~l~~l~~L~~L~L~~N~l~g~ip~ 122 (623)
+|+.+-+...++|.+. -|.|.+.. +..++.|+|++|+|++..|..|.+|++|++|||++|+|++..|.
T Consensus 15 ~~~~~~p~~~~~c~~~~~~~~~~c~~~~l~~vP~~lp~~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~ 94 (635)
T 4g8a_A 15 AANSSIPESWEPCVEVVPNITYQCMELNFYKIPDNLPFSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDG 94 (635)
T ss_dssp ----------CCSEEEETTTEEECTTSCCSSCCSSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTT
T ss_pred cccCCCCCCCCCccccCCCCEEECCCCCcCccCCCCCcCCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCCcCCCcChh
Confidence 6665544444466543 36786532 24689999999999998888999999999999999999965555
Q ss_pred hHhhhcCCCCEEEccCccCCCCCCCCCCCCCCCceeeccCCcCCCCCCccccccccccccccccccccc-cCCcccc-c-
Q 006982 123 DISKLVGFLTSLDLSSNNFSGSIPSNLANCTYLNSLKLDHNRFSGQIPPQLGQLGRLKSFSVANNLLSG-SIPTFVN-L- 199 (623)
Q Consensus 123 ~~~~l~~~L~~L~L~~N~l~g~ip~~~~~l~~L~~l~l~~N~~~g~iP~~l~~l~~L~~l~l~~N~l~g-~ip~~~~-~- 199 (623)
.|.++. +|++|+|++|+|++..|..|.++++|++|+|++|++++..|..++++++|+.|+|++|.+++ .+|..+. +
T Consensus 95 ~f~~L~-~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~Ls~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~l~ 173 (635)
T 4g8a_A 95 AYQSLS-HLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLT 173 (635)
T ss_dssp TTTTCT-TCCEEECTTCCCCEECGGGGTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCT
T ss_pred HhcCCC-CCCEEEccCCcCCCCCHHHhcCCCCCCEEECCCCcCCCCChhhhhcCcccCeeccccCccccCCCchhhccch
Confidence 677765 49999999999996555678999999999999999997666779999999999999999976 5666543 1
Q ss_pred cccccccCCC
Q 006982 200 TLSADSVTNN 209 (623)
Q Consensus 200 ~~~~~~~~~n 209 (623)
.+....+.+|
T Consensus 174 ~L~~L~L~~N 183 (635)
T 4g8a_A 174 NLEHLDLSSN 183 (635)
T ss_dssp TCCEEECCSS
T ss_pred hhhhhcccCc
Confidence 2333444444
No 277
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.57 E-value=5.4e-15 Score=143.23 Aligned_cols=114 Identities=16% Similarity=0.166 Sum_probs=105.8
Q ss_pred CcEEEEEecCCCceeeCCccccCCCCCCEEEcCCCCCCCCCChhHhhhcCCCCEEEccCccCCCCCCCCCCCCCCCceee
Q 006982 80 NRVLNLRLTDMGLKGQFPRGIRNCSSMTGLDLSSNKLYGPLPDDISKLVGFLTSLDLSSNNFSGSIPSNLANCTYLNSLK 159 (623)
Q Consensus 80 ~~v~~l~l~~~~l~g~~p~~l~~l~~L~~L~L~~N~l~g~ip~~~~~l~~~L~~L~L~~N~l~g~ip~~~~~l~~L~~l~ 159 (623)
.++..|+|++|.+++..|..|+++++|+.|+|++|.+++..|..+..+. +|++|+|++|++++..|..+.++++|++|+
T Consensus 57 ~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~-~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 135 (220)
T 2v70_A 57 PQLRKINFSNNKITDIEEGAFEGASGVNEILLTSNRLENVQHKMFKGLE-SLKTLMLRSNRITCVGNDSFIGLSSVRLLS 135 (220)
T ss_dssp TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCCCCGGGGTTCS-SCCEEECTTSCCCCBCTTSSTTCTTCSEEE
T ss_pred CCCCEEECCCCcCCEECHHHhCCCCCCCEEECCCCccCccCHhHhcCCc-CCCEEECCCCcCCeECHhHcCCCccCCEEE
Confidence 4689999999999999888999999999999999999976666677765 599999999999988899999999999999
Q ss_pred ccCCcCCCCCCccccccccccccccccccccccCC
Q 006982 160 LDHNRFSGQIPPQLGQLGRLKSFSVANNLLSGSIP 194 (623)
Q Consensus 160 l~~N~~~g~iP~~l~~l~~L~~l~l~~N~l~g~ip 194 (623)
|++|++++..|..+..+++|+.|+|++|.+++..+
T Consensus 136 L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~ 170 (220)
T 2v70_A 136 LYDNQITTVAPGAFDTLHSLSTLNLLANPFNCNCY 170 (220)
T ss_dssp CTTSCCCCBCTTTTTTCTTCCEEECCSCCEECSGG
T ss_pred CCCCcCCEECHHHhcCCCCCCEEEecCcCCcCCCc
Confidence 99999999889999999999999999999998776
No 278
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.55 E-value=1.6e-15 Score=172.69 Aligned_cols=111 Identities=28% Similarity=0.416 Sum_probs=83.1
Q ss_pred EEEEEecCCCceeeCCccccCCCCCCEEEcCCCCCCCCCChhHhhhcCCCCEEEccCccCCCCCCCCCCCCCCCceeecc
Q 006982 82 VLNLRLTDMGLKGQFPRGIRNCSSMTGLDLSSNKLYGPLPDDISKLVGFLTSLDLSSNNFSGSIPSNLANCTYLNSLKLD 161 (623)
Q Consensus 82 v~~l~l~~~~l~g~~p~~l~~l~~L~~L~L~~N~l~g~ip~~~~~l~~~L~~L~L~~N~l~g~ip~~~~~l~~L~~l~l~ 161 (623)
+..|+|++|.+. .+|+.+.+|++|++|+|++|.|+ .||..++++.+ |++|+|++|+|+ .||..|++|++|++|+|+
T Consensus 226 L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~-L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~ 301 (727)
T 4b8c_D 226 WHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSN-LRVLDLSHNRLT-SLPAELGSCFQLKYFYFF 301 (727)
T ss_dssp CCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTT-CCEEECTTSCCS-SCCSSGGGGTTCSEEECC
T ss_pred CcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCC-CCEEeCcCCcCC-ccChhhcCCCCCCEEECC
Confidence 345666666666 67777777777777777777777 77777777644 788888888877 777777777778888888
Q ss_pred CCcCCCCCCccccccccccccccccccccccCCccc
Q 006982 162 HNRFSGQIPPQLGQLGRLKSFSVANNLLSGSIPTFV 197 (623)
Q Consensus 162 ~N~~~g~iP~~l~~l~~L~~l~l~~N~l~g~ip~~~ 197 (623)
+|.|+ .||..|++|++|+.|+|++|.|+|.+|..+
T Consensus 302 ~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~ 336 (727)
T 4b8c_D 302 DNMVT-TLPWEFGNLCNLQFLGVEGNPLEKQFLKIL 336 (727)
T ss_dssp SSCCC-CCCSSTTSCTTCCCEECTTSCCCSHHHHHH
T ss_pred CCCCC-ccChhhhcCCCccEEeCCCCccCCCChHHH
Confidence 87776 677777777788888888888877777654
No 279
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.55 E-value=1.3e-14 Score=134.62 Aligned_cols=107 Identities=22% Similarity=0.258 Sum_probs=90.5
Q ss_pred EEecCCCceeeCCccccCCCCCCEEEcCCCCCCCCCChhHhhhcCCCCEEEccCccCCCCCCCCCCCCCCCceeeccCCc
Q 006982 85 LRLTDMGLKGQFPRGIRNCSSMTGLDLSSNKLYGPLPDDISKLVGFLTSLDLSSNNFSGSIPSNLANCTYLNSLKLDHNR 164 (623)
Q Consensus 85 l~l~~~~l~g~~p~~l~~l~~L~~L~L~~N~l~g~ip~~~~~l~~~L~~L~L~~N~l~g~ip~~~~~l~~L~~l~l~~N~ 164 (623)
|++++|+|+. +|..+ .++|+.|+|++|+|++..|..+..+.+ |++|+|++|+|++..|..+.++++|++|+|++|+
T Consensus 14 l~~s~n~l~~-ip~~~--~~~l~~L~L~~N~i~~~~~~~~~~l~~-L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~ 89 (170)
T 3g39_A 14 VDCSGKSLAS-VPTGI--PTTTQVLYLYDNQITKLEPGVFDRLTQ-LTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDNQ 89 (170)
T ss_dssp EECTTSCCSS-CCSCC--CTTCSEEECCSSCCCCCCTTTTTTCTT-CSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred EEeCCCCcCc-cCccC--CCCCcEEEcCCCcCCccChhhhcCccc-CCEEECCCCCcCccChhhccCCCCCCEEECCCCc
Confidence 3445566664 77766 389999999999999877888888654 9999999999996655567999999999999999
Q ss_pred CCCCCCccccccccccccccccccccccCCc
Q 006982 165 FSGQIPPQLGQLGRLKSFSVANNLLSGSIPT 195 (623)
Q Consensus 165 ~~g~iP~~l~~l~~L~~l~l~~N~l~g~ip~ 195 (623)
|++..|..+.++++|+.|+|++|.+++..+.
T Consensus 90 l~~~~~~~~~~l~~L~~L~L~~N~~~c~c~~ 120 (170)
T 3g39_A 90 LKSIPRGAFDNLKSLTHIWLLNNPWDCACSD 120 (170)
T ss_dssp CCCCCTTTTTTCTTCCEEECCSSCBCTTBGG
T ss_pred cCEeCHHHhcCCCCCCEEEeCCCCCCCCchh
Confidence 9976666799999999999999999987664
No 280
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.54 E-value=2.1e-14 Score=136.05 Aligned_cols=112 Identities=23% Similarity=0.251 Sum_probs=100.5
Q ss_pred CcEEEEEecCCCceeeCCccccCCCCCCEEEcCCCCCCCCCChhHhhhcCCCCEEEccCccCCCCCCCCCCCCCCCceee
Q 006982 80 NRVLNLRLTDMGLKGQFPRGIRNCSSMTGLDLSSNKLYGPLPDDISKLVGFLTSLDLSSNNFSGSIPSNLANCTYLNSLK 159 (623)
Q Consensus 80 ~~v~~l~l~~~~l~g~~p~~l~~l~~L~~L~L~~N~l~g~ip~~~~~l~~~L~~L~L~~N~l~g~ip~~~~~l~~L~~l~ 159 (623)
..++.|+|++|+++ .+|..+.++++|+.|+|++|.+++..|..+..+. +|++|+|++|+|++..|..|.++++|++|+
T Consensus 31 ~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~-~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~ 108 (193)
T 2wfh_A 31 RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMT-QLLTLILSYNRLRCIPPRTFDGLKSLRLLS 108 (193)
T ss_dssp TTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCT-TCCEEECCSSCCCBCCTTTTTTCTTCCEEE
T ss_pred CCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCC-CCCEEECCCCccCEeCHHHhCCCCCCCEEE
Confidence 46899999999998 7889999999999999999999976667788865 499999999999987777899999999999
Q ss_pred ccCCcCCCCCCccccccccccccccccccccccC
Q 006982 160 LDHNRFSGQIPPQLGQLGRLKSFSVANNLLSGSI 193 (623)
Q Consensus 160 l~~N~~~g~iP~~l~~l~~L~~l~l~~N~l~g~i 193 (623)
|++|+|++..+..+..+++|+.|+|++|.+...-
T Consensus 109 L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C~c 142 (193)
T 2wfh_A 109 LHGNDISVVPEGAFNDLSALSHLAIGANPLYCDC 142 (193)
T ss_dssp CCSSCCCBCCTTTTTTCTTCCEEECCSSCEECSG
T ss_pred CCCCCCCeeChhhhhcCccccEEEeCCCCeecCC
Confidence 9999999655557899999999999999998643
No 281
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.53 E-value=1.8e-14 Score=150.63 Aligned_cols=132 Identities=18% Similarity=0.132 Sum_probs=112.0
Q ss_pred CCCCCcccceeecCCC--------CCcEEEEEecCCCceeeCCcccc-CCCCCCEEEcCCCCCCCCCChhHhhhcCCCCE
Q 006982 63 EGFICKFTGVECWHPD--------ENRVLNLRLTDMGLKGQFPRGIR-NCSSMTGLDLSSNKLYGPLPDDISKLVGFLTS 133 (623)
Q Consensus 63 ~~~~c~w~gv~c~~~~--------~~~v~~l~l~~~~l~g~~p~~l~-~l~~L~~L~L~~N~l~g~ip~~~~~l~~~L~~ 133 (623)
..|.|.|.-|.|.+.. ...++.|+|++|++++..+..+. ++++|+.|+|++|+|++..|..+..+. +|++
T Consensus 14 ~~C~C~~~~l~c~~~~l~~iP~~~~~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~-~L~~ 92 (361)
T 2xot_A 14 ANCLCASNILSCSKQQLPNVPQSLPSYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVP-NLRY 92 (361)
T ss_dssp TTCEEETTEEECCSSCCSSCCSSCCTTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCT-TCCE
T ss_pred CCCEECCCEEEeCCCCcCccCccCCCCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCC-CCCE
Confidence 4467889889997532 23477899999999998888887 999999999999999966666787765 4999
Q ss_pred EEccCccCCCCCCCCCCCCCCCceeeccCCcCCCCCCccccccccccccccccccccccCCc
Q 006982 134 LDLSSNNFSGSIPSNLANCTYLNSLKLDHNRFSGQIPPQLGQLGRLKSFSVANNLLSGSIPT 195 (623)
Q Consensus 134 L~L~~N~l~g~ip~~~~~l~~L~~l~l~~N~~~g~iP~~l~~l~~L~~l~l~~N~l~g~ip~ 195 (623)
|+|++|+|++..|..|.++++|+.|+|++|++++..|..+..+++|+.|+|++|+|++..+.
T Consensus 93 L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~ 154 (361)
T 2xot_A 93 LDLSSNHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVE 154 (361)
T ss_dssp EECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGG
T ss_pred EECCCCcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCeeCHH
Confidence 99999999976666789999999999999999988888999999999999999999874433
No 282
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=99.53 E-value=1.1e-14 Score=157.06 Aligned_cols=145 Identities=15% Similarity=0.159 Sum_probs=119.7
Q ss_pred CCCcccc--eeecCCC-------CCcEEEEEecCCCceeeCCccccCCCCCCEEEcCCCCCCCCCCh-hHhhhcCCCCEE
Q 006982 65 FICKFTG--VECWHPD-------ENRVLNLRLTDMGLKGQFPRGIRNCSSMTGLDLSSNKLYGPLPD-DISKLVGFLTSL 134 (623)
Q Consensus 65 ~~c~w~g--v~c~~~~-------~~~v~~l~l~~~~l~g~~p~~l~~l~~L~~L~L~~N~l~g~ip~-~~~~l~~~L~~L 134 (623)
..|.|.+ |.|++.. ..+++.|+|++|.+++..|..|+++++|++|+|++|.+.+.+|+ .+..+ ++|++|
T Consensus 6 ~~c~~~~~~~~c~~~~l~~lp~l~~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l-~~L~~L 84 (455)
T 3v47_A 6 SECSVIGYNAICINRGLHQVPELPAHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGL-SSLIIL 84 (455)
T ss_dssp -CCEEETTEEECCSSCCSSCCCCCTTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTC-TTCCEE
T ss_pred ceeEEEccccCcCCCCcccCCCCCCccCEEEecCCccCcCChhHhccCccccEEECcCCcccceECccccccc-ccCCEE
Confidence 3566666 8886543 25689999999999999999999999999999999999988865 46665 459999
Q ss_pred EccCccCCCCCCCCCCCCCCCceeeccCCcCCCCCCcc--ccccccccccccccccccccCCcc-cc-c-cccccccCCC
Q 006982 135 DLSSNNFSGSIPSNLANCTYLNSLKLDHNRFSGQIPPQ--LGQLGRLKSFSVANNLLSGSIPTF-VN-L-TLSADSVTNN 209 (623)
Q Consensus 135 ~L~~N~l~g~ip~~~~~l~~L~~l~l~~N~~~g~iP~~--l~~l~~L~~l~l~~N~l~g~ip~~-~~-~-~~~~~~~~~n 209 (623)
+|++|++++..|..++++++|++|+|++|++++.+|.. ++++++|+.|+|++|++++..|.. +. + ++....+++|
T Consensus 85 ~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n 164 (455)
T 3v47_A 85 KLDYNQFLQLETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFN 164 (455)
T ss_dssp ECTTCTTCEECTTTTTTCTTCCEEECTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCGGGGGCTTCCEEECTTC
T ss_pred eCCCCccCccChhhccCcccCCEEeCCCCCCCccccCcccccCcccCCEEECCCCccCccCcccccCCCCcccEEeCCCC
Confidence 99999999888999999999999999999999877665 899999999999999999988864 22 2 3344455555
Q ss_pred C
Q 006982 210 Q 210 (623)
Q Consensus 210 ~ 210 (623)
.
T Consensus 165 ~ 165 (455)
T 3v47_A 165 K 165 (455)
T ss_dssp C
T ss_pred c
Confidence 3
No 283
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.51 E-value=5.1e-15 Score=133.98 Aligned_cols=112 Identities=23% Similarity=0.253 Sum_probs=99.1
Q ss_pred CcEEEEEecCCCce-eeCCccccCCCCCCEEEcCCCCCCCCCChhHhhhcCCCCEEEccCccCCCCCCCCCCCCCCCcee
Q 006982 80 NRVLNLRLTDMGLK-GQFPRGIRNCSSMTGLDLSSNKLYGPLPDDISKLVGFLTSLDLSSNNFSGSIPSNLANCTYLNSL 158 (623)
Q Consensus 80 ~~v~~l~l~~~~l~-g~~p~~l~~l~~L~~L~L~~N~l~g~ip~~~~~l~~~L~~L~L~~N~l~g~ip~~~~~l~~L~~l 158 (623)
.+++.|++++|+++ |.+|..++.+++|+.|+|++|.+++. ..++.+. +|++|+|++|++++.+|..++++++|++|
T Consensus 17 ~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~-~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L 93 (149)
T 2je0_A 17 SDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLN-KLKKLELSDNRVSGGLEVLAEKCPNLTHL 93 (149)
T ss_dssp GGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCT-TCCEEECCSSCCCSCTHHHHHHCTTCCEE
T ss_pred ccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCC-CCCEEECCCCcccchHHHHhhhCCCCCEE
Confidence 46889999999998 89999999999999999999999965 6677764 49999999999998888888889999999
Q ss_pred eccCCcCCCC-CCccccccccccccccccccccccCC
Q 006982 159 KLDHNRFSGQ-IPPQLGQLGRLKSFSVANNLLSGSIP 194 (623)
Q Consensus 159 ~l~~N~~~g~-iP~~l~~l~~L~~l~l~~N~l~g~ip 194 (623)
+|++|++++. .|..++.+++|+.|++++|.+++..+
T Consensus 94 ~ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~ 130 (149)
T 2je0_A 94 NLSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLND 130 (149)
T ss_dssp ECTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTT
T ss_pred ECCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHH
Confidence 9999999972 45889999999999999999998765
No 284
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.50 E-value=4.7e-14 Score=136.57 Aligned_cols=111 Identities=20% Similarity=0.251 Sum_probs=101.4
Q ss_pred CcEEEEEecCCCceeeCCccccCCCCCCEEEcCCCCCCCCCChhH-hhhcCCCCEEEccCccCCCCCCCCCCCCCCCcee
Q 006982 80 NRVLNLRLTDMGLKGQFPRGIRNCSSMTGLDLSSNKLYGPLPDDI-SKLVGFLTSLDLSSNNFSGSIPSNLANCTYLNSL 158 (623)
Q Consensus 80 ~~v~~l~l~~~~l~g~~p~~l~~l~~L~~L~L~~N~l~g~ip~~~-~~l~~~L~~L~L~~N~l~g~ip~~~~~l~~L~~l 158 (623)
.++..|+|++|.+++..|..|.++++|++|+|++|.|+ .+|..+ ..+ ++|++|+|++|++++..|..|.++++|++|
T Consensus 56 ~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~-~l~~~~f~~l-~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 133 (220)
T 2v9t_B 56 KKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKIT-ELPKSLFEGL-FSLQLLLLNANKINCLRVDAFQDLHNLNLL 133 (220)
T ss_dssp TTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSSCCC-CCCTTTTTTC-TTCCEEECCSSCCCCCCTTTTTTCTTCCEE
T ss_pred CCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCCcCC-ccCHhHccCC-CCCCEEECCCCCCCEeCHHHcCCCCCCCEE
Confidence 57899999999999999999999999999999999999 677664 555 559999999999998888999999999999
Q ss_pred eccCCcCCCCCCcccccccccccccccccccccc
Q 006982 159 KLDHNRFSGQIPPQLGQLGRLKSFSVANNLLSGS 192 (623)
Q Consensus 159 ~l~~N~~~g~iP~~l~~l~~L~~l~l~~N~l~g~ 192 (623)
+|++|+|++..|..+..+++|+.|+|++|.++..
T Consensus 134 ~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~ 167 (220)
T 2v9t_B 134 SLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFICD 167 (220)
T ss_dssp ECCSSCCSCCCTTTTTTCTTCCEEECCSSCEECS
T ss_pred ECCCCcCCEECHHHHhCCCCCCEEEeCCCCcCCC
Confidence 9999999987777899999999999999999764
No 285
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.50 E-value=2.5e-14 Score=158.01 Aligned_cols=110 Identities=27% Similarity=0.271 Sum_probs=102.2
Q ss_pred cEEEEEecCCCceeeCCccccCCCCCCEEEcCCCCCCCCCChhHhhhcCCCCEEEccCccCCCCCCCCCCCCCCCceeec
Q 006982 81 RVLNLRLTDMGLKGQFPRGIRNCSSMTGLDLSSNKLYGPLPDDISKLVGFLTSLDLSSNNFSGSIPSNLANCTYLNSLKL 160 (623)
Q Consensus 81 ~v~~l~l~~~~l~g~~p~~l~~l~~L~~L~L~~N~l~g~ip~~~~~l~~~L~~L~L~~N~l~g~ip~~~~~l~~L~~l~l 160 (623)
.+..|+|++|+|++ +|. +++|++|+.|+|++|.|+ .+|..++.+.+ |+.|+|++|+|++ +| .++++++|+.|+|
T Consensus 442 ~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~-L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~L 515 (567)
T 1dce_A 442 DVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLR-ALPPALAALRC-LEVLQASDNALEN-VD-GVANLPRLQELLL 515 (567)
T ss_dssp TCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCC-CCCGGGGGCTT-CCEEECCSSCCCC-CG-GGTTCSSCCEEEC
T ss_pred CceEEEecCCCCCC-CcC-ccccccCcEeecCccccc-ccchhhhcCCC-CCEEECCCCCCCC-Cc-ccCCCCCCcEEEC
Confidence 36789999999997 676 999999999999999999 99999999765 9999999999996 88 8999999999999
Q ss_pred cCCcCCCCC-CccccccccccccccccccccccCCcc
Q 006982 161 DHNRFSGQI-PPQLGQLGRLKSFSVANNLLSGSIPTF 196 (623)
Q Consensus 161 ~~N~~~g~i-P~~l~~l~~L~~l~l~~N~l~g~ip~~ 196 (623)
++|+|++.+ |..++.+++|+.|+|++|.|++.+|..
T Consensus 516 s~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~ 552 (567)
T 1dce_A 516 CNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQ 552 (567)
T ss_dssp CSSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSSCT
T ss_pred CCCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCccHH
Confidence 999999887 999999999999999999999987753
No 286
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.50 E-value=7.6e-14 Score=140.65 Aligned_cols=129 Identities=22% Similarity=0.219 Sum_probs=109.2
Q ss_pred CcEEEEEecCCCceeeCCccccCCCCCCEEEcCCCCCCCCCChhHhhhcCCCCEEEccCcc-CCCCCCCCCCCCCCCcee
Q 006982 80 NRVLNLRLTDMGLKGQFPRGIRNCSSMTGLDLSSNKLYGPLPDDISKLVGFLTSLDLSSNN-FSGSIPSNLANCTYLNSL 158 (623)
Q Consensus 80 ~~v~~l~l~~~~l~g~~p~~l~~l~~L~~L~L~~N~l~g~ip~~~~~l~~~L~~L~L~~N~-l~g~ip~~~~~l~~L~~l 158 (623)
..++.|+|++|++++..+..++++++|++|+|++|.+++..|..+..+. +|++|+|++|. +++..|..+.++++|++|
T Consensus 32 ~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~-~L~~L~l~~n~~l~~~~~~~~~~l~~L~~L 110 (285)
T 1ozn_A 32 AASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLA-LLEQLDLSDNAQLRSVDPATFHGLGRLHTL 110 (285)
T ss_dssp TTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCT-TCCEEECCSCTTCCCCCTTTTTTCTTCCEE
T ss_pred CCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCcc-CCCEEeCCCCCCccccCHHHhcCCcCCCEE
Confidence 4688999999999998888899999999999999999987788888865 49999999998 775557889999999999
Q ss_pred eccCCcCCCCCCccccccccccccccccccccccCCcccc-c-cccccccCCC
Q 006982 159 KLDHNRFSGQIPPQLGQLGRLKSFSVANNLLSGSIPTFVN-L-TLSADSVTNN 209 (623)
Q Consensus 159 ~l~~N~~~g~iP~~l~~l~~L~~l~l~~N~l~g~ip~~~~-~-~~~~~~~~~n 209 (623)
+|++|++++..|..+.++++|+.|++++|.+++..+..+. + .+....+++|
T Consensus 111 ~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n 163 (285)
T 1ozn_A 111 HLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGN 163 (285)
T ss_dssp ECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred ECCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEECCCC
Confidence 9999999988888899999999999999999977665443 1 3344445555
No 287
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=99.49 E-value=6.3e-14 Score=156.79 Aligned_cols=118 Identities=24% Similarity=0.257 Sum_probs=99.3
Q ss_pred CcEEEEEecCCCceeeCCccccCCCCCCEEEcCCCCCCCCCChhHhhhcCCCCEEEccCccCCCCCCCCCCCCCCCceee
Q 006982 80 NRVLNLRLTDMGLKGQFPRGIRNCSSMTGLDLSSNKLYGPLPDDISKLVGFLTSLDLSSNNFSGSIPSNLANCTYLNSLK 159 (623)
Q Consensus 80 ~~v~~l~l~~~~l~g~~p~~l~~l~~L~~L~L~~N~l~g~ip~~~~~l~~~L~~L~L~~N~l~g~ip~~~~~l~~L~~l~ 159 (623)
.+++.|+|++|.+++..|..|+++++|++|+|++|.+++..|..+.++.+ |++|+|++|++++..|..|+++++|++|+
T Consensus 32 ~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~-L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~ 110 (606)
T 3vq2_A 32 SSTKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHH-LSNLILTGNPIQSFSPGSFSGLTSLENLV 110 (606)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTT-CCEEECTTCCCCCCCTTSSTTCTTCCEEE
T ss_pred CCcCEEECCCCCcCEeChhhccCCccCcEEeCCCCcccccCHHHhhchhh-cCEeECCCCcccccChhhcCCcccCCEEE
Confidence 56889999999999888888999999999999999998777777877654 99999999999987788888899999999
Q ss_pred ccCCcCCCCCCccccccccccccccccccccc-cCCcccc
Q 006982 160 LDHNRFSGQIPPQLGQLGRLKSFSVANNLLSG-SIPTFVN 198 (623)
Q Consensus 160 l~~N~~~g~iP~~l~~l~~L~~l~l~~N~l~g-~ip~~~~ 198 (623)
|++|++++..|..++++++|++|+|++|.+++ .+|..+.
T Consensus 111 L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~ 150 (606)
T 3vq2_A 111 AVETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFS 150 (606)
T ss_dssp CTTSCCCCSSSSCCTTCTTCCEEECCSSCCCCCCCCGGGG
T ss_pred ccCCccccccccccCCCCCCCEEeCCCCcccceechHhHh
Confidence 99998887666788888888888888888876 6676543
No 288
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.49 E-value=7.9e-14 Score=141.00 Aligned_cols=131 Identities=24% Similarity=0.227 Sum_probs=71.9
Q ss_pred cEEEEEecCCCceeeCCccccCCCCCCEEEcCCCCCCCCCChhHhhhcCCCCEEEccCccCCCCCCCCCCCCCCCceeec
Q 006982 81 RVLNLRLTDMGLKGQFPRGIRNCSSMTGLDLSSNKLYGPLPDDISKLVGFLTSLDLSSNNFSGSIPSNLANCTYLNSLKL 160 (623)
Q Consensus 81 ~v~~l~l~~~~l~g~~p~~l~~l~~L~~L~L~~N~l~g~ip~~~~~l~~~L~~L~L~~N~l~g~ip~~~~~l~~L~~l~l 160 (623)
.+..|+|++|.++ .+|..+..+++|++|+|++|++++..|..+..+. +|++|+|++|++++..|..+..+++|+.|+|
T Consensus 78 ~L~~L~Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~-~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 155 (290)
T 1p9a_G 78 VLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLG-ELQELYLKGNELKTLPPGLLTPTPKLEKLSL 155 (290)
T ss_dssp TCCEEECCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCT-TCCEEECTTSCCCCCCTTTTTTCTTCCEEEC
T ss_pred cCCEEECCCCcCC-cCchhhccCCCCCEEECCCCcCcccCHHHHcCCC-CCCEEECCCCCCCccChhhcccccCCCEEEC
Confidence 4555555555554 4555566666666666666666643334455543 3666666666666444444556666666666
Q ss_pred cCCcCCCCCCccccccccccccccccccccccCCcccc-c-cccccccCCCCCCCC
Q 006982 161 DHNRFSGQIPPQLGQLGRLKSFSVANNLLSGSIPTFVN-L-TLSADSVTNNQGLCG 214 (623)
Q Consensus 161 ~~N~~~g~iP~~l~~l~~L~~l~l~~N~l~g~ip~~~~-~-~~~~~~~~~n~~l~~ 214 (623)
++|+|++..+..+..+++|+.|+|++|+|+ .+|..+. . .+....+.+|++.|.
T Consensus 156 ~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~-~ip~~~~~~~~L~~l~L~~Np~~C~ 210 (290)
T 1p9a_G 156 ANNNLTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPWLCN 210 (290)
T ss_dssp TTSCCSCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCSCCBCCS
T ss_pred CCCcCCccCHHHhcCcCCCCEEECCCCcCC-ccChhhcccccCCeEEeCCCCccCc
Confidence 666666333333455666666666666666 3443221 1 233445566666554
No 289
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=99.49 E-value=3e-14 Score=153.49 Aligned_cols=136 Identities=19% Similarity=0.171 Sum_probs=119.0
Q ss_pred CcEEEEEecCCCceeeCCccccCCCCCCEEEcCCCCCCCCCChhHhhhcCCCCEEEccCccCCCCCCCCCCCCCCCceee
Q 006982 80 NRVLNLRLTDMGLKGQFPRGIRNCSSMTGLDLSSNKLYGPLPDDISKLVGFLTSLDLSSNNFSGSIPSNLANCTYLNSLK 159 (623)
Q Consensus 80 ~~v~~l~l~~~~l~g~~p~~l~~l~~L~~L~L~~N~l~g~ip~~~~~l~~~L~~L~L~~N~l~g~ip~~~~~l~~L~~l~ 159 (623)
..+..|+|++|.+++.+|..++++++|+.|+|++|.+++..|..+..+.+ |++|+|++|++++..|..++++++|++|+
T Consensus 275 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~-L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 353 (455)
T 3v47_A 275 SGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTH-LLKLNLSQNFLGSIDSRMFENLDKLEVLD 353 (455)
T ss_dssp SCCCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTT-CCEEECCSSCCCEECGGGGTTCTTCCEEE
T ss_pred cCceEEEecCccccccchhhcccCCCCCEEECCCCcccccChhHhcCccc-CCEEECCCCccCCcChhHhcCcccCCEEE
Confidence 36889999999999999999999999999999999999888888888654 99999999999987788899999999999
Q ss_pred ccCCcCCCCCCccccccccccccccccccccccCCcccc-c-cccccccCCCCCCCCCC
Q 006982 160 LDHNRFSGQIPPQLGQLGRLKSFSVANNLLSGSIPTFVN-L-TLSADSVTNNQGLCGEP 216 (623)
Q Consensus 160 l~~N~~~g~iP~~l~~l~~L~~l~l~~N~l~g~ip~~~~-~-~~~~~~~~~n~~l~~~~ 216 (623)
|++|++++..|..+..+++|+.|+|++|++++..|..+. + .+....+.+|+..|..|
T Consensus 354 Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~ 412 (455)
T 3v47_A 354 LSYNHIRALGDQSFLGLPNLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 412 (455)
T ss_dssp CCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTT
T ss_pred CCCCcccccChhhccccccccEEECCCCccccCCHhHhccCCcccEEEccCCCcccCCC
Confidence 999999988899999999999999999999986665433 2 45667788888777655
No 290
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.49 E-value=3.8e-14 Score=135.83 Aligned_cols=118 Identities=21% Similarity=0.197 Sum_probs=101.4
Q ss_pred CcEEEEEecCCCceeeCCccccCCCCCCEEEcCCCCCCCCCChhHhhhcCCCCEEEccCccCCCCCCCCCCCCCCCceee
Q 006982 80 NRVLNLRLTDMGLKGQFPRGIRNCSSMTGLDLSSNKLYGPLPDDISKLVGFLTSLDLSSNNFSGSIPSNLANCTYLNSLK 159 (623)
Q Consensus 80 ~~v~~l~l~~~~l~g~~p~~l~~l~~L~~L~L~~N~l~g~ip~~~~~l~~~L~~L~L~~N~l~g~ip~~~~~l~~L~~l~ 159 (623)
.++..|+|++|++++..+..+.++++|++|+|++|++++..|..+..+. +|++|+|++|++++..|..+.++++|++|+
T Consensus 52 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~-~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 130 (208)
T 2o6s_A 52 TSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTNQLQSLPNGVFDKLT-QLKELALNTNQLQSLPDGVFDKLTQLKDLR 130 (208)
T ss_dssp TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCT-TCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred ccCcEEECCCCccCccChhhcCCCCCcCEEECCCCcCCccCHhHhcCcc-CCCEEEcCCCcCcccCHhHhccCCcCCEEE
Confidence 5689999999999977667789999999999999999954444466754 599999999999976666689999999999
Q ss_pred ccCCcCCCCCCccccccccccccccccccccccCCcccc
Q 006982 160 LDHNRFSGQIPPQLGQLGRLKSFSVANNLLSGSIPTFVN 198 (623)
Q Consensus 160 l~~N~~~g~iP~~l~~l~~L~~l~l~~N~l~g~ip~~~~ 198 (623)
|++|++++..+..+..+++|+.|++++|.+++..|....
T Consensus 131 l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~l~~ 169 (208)
T 2o6s_A 131 LYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCPGIRY 169 (208)
T ss_dssp CCSSCCSCCCTTTTTTCTTCCEEECCSCCBCCCTTTTHH
T ss_pred CCCCccceeCHHHhccCCCccEEEecCCCeecCCCCHHH
Confidence 999999976666789999999999999999999886433
No 291
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.49 E-value=1e-13 Score=138.55 Aligned_cols=114 Identities=22% Similarity=0.172 Sum_probs=70.2
Q ss_pred cEEEEEecCCCceeeCCccccCCCCCCEEEcCCCCCCCCCChhHhhhcCCCCEEEccCccCCCCCCCCCCCCCCCceeec
Q 006982 81 RVLNLRLTDMGLKGQFPRGIRNCSSMTGLDLSSNKLYGPLPDDISKLVGFLTSLDLSSNNFSGSIPSNLANCTYLNSLKL 160 (623)
Q Consensus 81 ~v~~l~l~~~~l~g~~p~~l~~l~~L~~L~L~~N~l~g~ip~~~~~l~~~L~~L~L~~N~l~g~ip~~~~~l~~L~~l~l 160 (623)
+++.|+|++|.++...+..+.++++|++|+|++|.+++..|..+..+ ++|++|+|++|++++..|..++++++|++|+|
T Consensus 62 ~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l-~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L 140 (270)
T 2o6q_A 62 KLRLLYLNDNKLQTLPAGIFKELKNLETLWVTDNKLQALPIGVFDQL-VNLAELRLDRNQLKSLPPRVFDSLTKLTYLSL 140 (270)
T ss_dssp TCCEEECCSSCCSCCCTTTTSSCTTCCEEECCSSCCCCCCTTTTTTC-SSCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCEEECCCCccCeeChhhhcCCCCCCEEECCCCcCCcCCHhHcccc-cCCCEEECCCCccCeeCHHHhCcCcCCCEEEC
Confidence 46677777777765444445667777777777777764333334443 33777777777776555555666666666666
Q ss_pred cCCcCCCCCCccccccccccccccccccccccCCc
Q 006982 161 DHNRFSGQIPPQLGQLGRLKSFSVANNLLSGSIPT 195 (623)
Q Consensus 161 ~~N~~~g~iP~~l~~l~~L~~l~l~~N~l~g~ip~ 195 (623)
++|++++..+..+..+++|+.|+|++|.+++..|.
T Consensus 141 s~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~ 175 (270)
T 2o6q_A 141 GYNELQSLPKGVFDKLTSLKELRLYNNQLKRVPEG 175 (270)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTT
T ss_pred CCCcCCccCHhHccCCcccceeEecCCcCcEeChh
Confidence 66666654444456666666666666666655443
No 292
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=99.49 E-value=1.9e-14 Score=159.02 Aligned_cols=128 Identities=23% Similarity=0.253 Sum_probs=109.3
Q ss_pred CCcccceeecCCC----------CCcEEEEEecCCCceeeCCccccCCCCCCEEEcCCCCCCCCCChhHhhhcCCCCEEE
Q 006982 66 ICKFTGVECWHPD----------ENRVLNLRLTDMGLKGQFPRGIRNCSSMTGLDLSSNKLYGPLPDDISKLVGFLTSLD 135 (623)
Q Consensus 66 ~c~w~gv~c~~~~----------~~~v~~l~l~~~~l~g~~p~~l~~l~~L~~L~L~~N~l~g~ip~~~~~l~~~L~~L~ 135 (623)
.|.|.|+ |+... ..+++.|+|++|++++..|..++++++|++|+|++|++++..|..++.+.+ |++|+
T Consensus 3 ~C~~~~~-c~~~~~~l~~ip~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~-L~~L~ 80 (549)
T 2z81_A 3 SCDASGV-CDGRSRSFTSIPSGLTAAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGS-LEHLD 80 (549)
T ss_dssp EECTTSE-EECTTSCCSSCCSCCCTTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTT-CCEEE
T ss_pred cCCCCce-EECCCCccccccccCCCCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhcccccc-CCEEE
Confidence 5899998 85421 246899999999999999999999999999999999999877788888654 99999
Q ss_pred ccCccCCCCCCCCCCCCCCCceeeccCCcCCC-CCCccccccccccccccccccccccCCc
Q 006982 136 LSSNNFSGSIPSNLANCTYLNSLKLDHNRFSG-QIPPQLGQLGRLKSFSVANNLLSGSIPT 195 (623)
Q Consensus 136 L~~N~l~g~ip~~~~~l~~L~~l~l~~N~~~g-~iP~~l~~l~~L~~l~l~~N~l~g~ip~ 195 (623)
|++|++++..|..++++++|++|+|++|++++ .+|..++++++|+.|++++|.+.+.+|.
T Consensus 81 Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~ 141 (549)
T 2z81_A 81 LSDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRR 141 (549)
T ss_dssp CTTSCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECT
T ss_pred CCCCccCccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEEECCCCccccccCH
Confidence 99999997766669999999999999999987 5678889999999999999987777763
No 293
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.49 E-value=1.9e-14 Score=146.57 Aligned_cols=145 Identities=21% Similarity=0.214 Sum_probs=115.5
Q ss_pred CCCCCcccceeecCCC--------CCcEEEEEecCCCceeeCCccccCCCCCCEEEcCCCCCC--CCCChhHhhhcCCCC
Q 006982 63 EGFICKFTGVECWHPD--------ENRVLNLRLTDMGLKGQFPRGIRNCSSMTGLDLSSNKLY--GPLPDDISKLVGFLT 132 (623)
Q Consensus 63 ~~~~c~w~gv~c~~~~--------~~~v~~l~l~~~~l~g~~p~~l~~l~~L~~L~L~~N~l~--g~ip~~~~~l~~~L~ 132 (623)
..|.|.|.+|.|++.. ...++.|+|++|+++...+..++++++|+.|+|++|.++ |.+|..+..+. +|+
T Consensus 3 ~~C~C~~~~l~c~~~~l~~ip~~~~~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~-~L~ 81 (306)
T 2z66_A 3 SRCSCSGTEIRCNSKGLTSVPTGIPSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTT-SLK 81 (306)
T ss_dssp TTCEEETTEEECCSSCCSSCCSCCCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEEEEEHHHHSCS-CCC
T ss_pred CCCeeCCCEEEcCCCCcccCCCCCCCCCCEEECCCCccCccCHhHhhccccCCEEECCCCccCcccCccccccccc-ccC
Confidence 3467999999997633 247899999999998544445899999999999999998 34477777754 599
Q ss_pred EEEccCccCCCCCCCCCCCCCCCceeeccCCcCCCCCC-ccccccccccccccccccccccCCcccc-c-cccccccCCC
Q 006982 133 SLDLSSNNFSGSIPSNLANCTYLNSLKLDHNRFSGQIP-PQLGQLGRLKSFSVANNLLSGSIPTFVN-L-TLSADSVTNN 209 (623)
Q Consensus 133 ~L~L~~N~l~g~ip~~~~~l~~L~~l~l~~N~~~g~iP-~~l~~l~~L~~l~l~~N~l~g~ip~~~~-~-~~~~~~~~~n 209 (623)
+|+|++|.++ .+|..+.++++|++|+|++|++++..+ ..+..+++|+.|++++|.+++.+|..+. + .+....+.+|
T Consensus 82 ~L~Ls~n~i~-~l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n 160 (306)
T 2z66_A 82 YLDLSFNGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGN 160 (306)
T ss_dssp EEECCSCSEE-EEEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEEECTTC
T ss_pred EEECCCCccc-cChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEEECCCC
Confidence 9999999999 688889999999999999999996554 5788999999999999999988887543 1 3333444444
No 294
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.48 E-value=3e-14 Score=143.63 Aligned_cols=117 Identities=21% Similarity=0.185 Sum_probs=77.5
Q ss_pred CcEEEEEecCCC-ceeeCCccccCCCCCCEEEcCCCCCCCCCChhHhhhcCCCCEEEccCccCCCCCCCCCCCCCCCcee
Q 006982 80 NRVLNLRLTDMG-LKGQFPRGIRNCSSMTGLDLSSNKLYGPLPDDISKLVGFLTSLDLSSNNFSGSIPSNLANCTYLNSL 158 (623)
Q Consensus 80 ~~v~~l~l~~~~-l~g~~p~~l~~l~~L~~L~L~~N~l~g~ip~~~~~l~~~L~~L~L~~N~l~g~ip~~~~~l~~L~~l 158 (623)
.++..|+|++|. +....|..+..+++|++|+|++|.+++..|..+..+.+ |++|+|++|++++..+..++++++|++|
T Consensus 80 ~~L~~L~l~~n~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~-L~~L~l~~n~l~~~~~~~~~~l~~L~~L 158 (285)
T 1ozn_A 80 ALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAA-LQYLYLQDNALQALPDDTFRDLGNLTHL 158 (285)
T ss_dssp TTCCEEECCSCTTCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTT-CCEEECCSSCCCCCCTTTTTTCTTCCEE
T ss_pred cCCCEEeCCCCCCccccCHHHhcCCcCCCEEECCCCcCCEECHhHhhCCcC-CCEEECCCCcccccCHhHhccCCCccEE
Confidence 356677777776 55555666777777777777777777655666666443 7777777777775444456677777777
Q ss_pred eccCCcCCCCCCccccccccccccccccccccccCCccc
Q 006982 159 KLDHNRFSGQIPPQLGQLGRLKSFSVANNLLSGSIPTFV 197 (623)
Q Consensus 159 ~l~~N~~~g~iP~~l~~l~~L~~l~l~~N~l~g~ip~~~ 197 (623)
+|++|++++..+..+..+++|+.|++++|.+++..|..+
T Consensus 159 ~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~ 197 (285)
T 1ozn_A 159 FLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAF 197 (285)
T ss_dssp ECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTT
T ss_pred ECCCCcccccCHHHhcCccccCEEECCCCcccccCHhHc
Confidence 777777775444456667777777777777776666543
No 295
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.48 E-value=4.4e-14 Score=141.46 Aligned_cols=117 Identities=22% Similarity=0.215 Sum_probs=104.7
Q ss_pred CcEEEEEecCCCceeeCCccccCCCCCCEEEcCCCCCCCCCChhHhhhcCCCCEEEccCccCCCCCCCCCCCCCCCceee
Q 006982 80 NRVLNLRLTDMGLKGQFPRGIRNCSSMTGLDLSSNKLYGPLPDDISKLVGFLTSLDLSSNNFSGSIPSNLANCTYLNSLK 159 (623)
Q Consensus 80 ~~v~~l~l~~~~l~g~~p~~l~~l~~L~~L~L~~N~l~g~ip~~~~~l~~~L~~L~L~~N~l~g~ip~~~~~l~~L~~l~ 159 (623)
..+..|+|++|++++..|..++++++|++|+|++|.+++..|..+..+. +|+.|+|++|++++..|..++++++|++|+
T Consensus 109 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~-~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 187 (272)
T 3rfs_A 109 TNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLT-NLTELDLSYNQLQSLPEGVFDKLTQLKDLR 187 (272)
T ss_dssp TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCT-TCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred cCCCEEECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCc-cCCEEECCCCCcCccCHHHhcCCccCCEEE
Confidence 5689999999999988888899999999999999999965555567764 599999999999977777789999999999
Q ss_pred ccCCcCCCCCCccccccccccccccccccccccCCccc
Q 006982 160 LDHNRFSGQIPPQLGQLGRLKSFSVANNLLSGSIPTFV 197 (623)
Q Consensus 160 l~~N~~~g~iP~~l~~l~~L~~l~l~~N~l~g~ip~~~ 197 (623)
|++|++++..|..++++++|+.|++++|.++|..|...
T Consensus 188 L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~l~ 225 (272)
T 3rfs_A 188 LYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCPGIR 225 (272)
T ss_dssp CCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTTTTH
T ss_pred CCCCcCCccCHHHHhCCcCCCEEEccCCCccccCcHHH
Confidence 99999999888888999999999999999999998643
No 296
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.48 E-value=1.1e-13 Score=138.93 Aligned_cols=129 Identities=21% Similarity=0.230 Sum_probs=106.5
Q ss_pred CcEEEEEecCCCceeeCCccccCCCCCCEEEcCCCCCCCCCChhHhhhcCCCCEEEccCccCCCCCCCCCCCCCCCceee
Q 006982 80 NRVLNLRLTDMGLKGQFPRGIRNCSSMTGLDLSSNKLYGPLPDDISKLVGFLTSLDLSSNNFSGSIPSNLANCTYLNSLK 159 (623)
Q Consensus 80 ~~v~~l~l~~~~l~g~~p~~l~~l~~L~~L~L~~N~l~g~ip~~~~~l~~~L~~L~L~~N~l~g~ip~~~~~l~~L~~l~ 159 (623)
..++.|+|++|++++..+..++++++|++|+|++|.+++..|..+..+. +|++|+|++|++++..|..+.++++|++|+
T Consensus 28 ~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~-~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 106 (276)
T 2z62_A 28 FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLS-HLSTLILTGNPIQSLALGAFSGLSSLQKLV 106 (276)
T ss_dssp TTCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCT-TCCEEECTTCCCCEECTTTTTTCTTCCEEE
T ss_pred CCccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCc-CCCEEECCCCccCccChhhhcCCccccEEE
Confidence 3588999999999988888899999999999999999965566777764 499999999999987778899999999999
Q ss_pred ccCCcCCCCCCccccccccccccccccccccc-cCCcccc-c-cccccccCCC
Q 006982 160 LDHNRFSGQIPPQLGQLGRLKSFSVANNLLSG-SIPTFVN-L-TLSADSVTNN 209 (623)
Q Consensus 160 l~~N~~~g~iP~~l~~l~~L~~l~l~~N~l~g-~ip~~~~-~-~~~~~~~~~n 209 (623)
+++|++++..+..++++++|+.|++++|++++ .+|..+. + .+....+++|
T Consensus 107 l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N 159 (276)
T 2z62_A 107 AVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSN 159 (276)
T ss_dssp CTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSS
T ss_pred CCCCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCC
Confidence 99999998777689999999999999999987 4676544 1 3334444444
No 297
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=99.47 E-value=6.6e-14 Score=151.89 Aligned_cols=134 Identities=19% Similarity=0.185 Sum_probs=116.2
Q ss_pred CCCC--cccceeecCCC--------CCcEEEEEecCCCceeeCCccccCCCCCCEEEcCCCCCCCCCChhHhhhcCCCCE
Q 006982 64 GFIC--KFTGVECWHPD--------ENRVLNLRLTDMGLKGQFPRGIRNCSSMTGLDLSSNKLYGPLPDDISKLVGFLTS 133 (623)
Q Consensus 64 ~~~c--~w~gv~c~~~~--------~~~v~~l~l~~~~l~g~~p~~l~~l~~L~~L~L~~N~l~g~ip~~~~~l~~~L~~ 133 (623)
.|.| .|..|.|.+.. ...++.|+|++|++++..|..|.++++|++|+|++|.+++..|..+.++.+ |++
T Consensus 6 ~C~C~~~~~~v~c~~~~l~~ip~~~~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~-L~~ 84 (477)
T 2id5_A 6 RCECSAQDRAVLCHRKRFVAVPEGIPTETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFN-LRT 84 (477)
T ss_dssp TCEEETTTTEEECCSCCCSSCCSCCCTTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTT-CCE
T ss_pred CCeECCCCCEEEeCCCCcCcCCCCCCCCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCcc-CCE
Confidence 3456 46789996532 246889999999999999999999999999999999999888989988755 999
Q ss_pred EEccCccCCCCCCCCCCCCCCCceeeccCCcCCCCCCccccccccccccccccccccccCCcccc
Q 006982 134 LDLSSNNFSGSIPSNLANCTYLNSLKLDHNRFSGQIPPQLGQLGRLKSFSVANNLLSGSIPTFVN 198 (623)
Q Consensus 134 L~L~~N~l~g~ip~~~~~l~~L~~l~l~~N~~~g~iP~~l~~l~~L~~l~l~~N~l~g~ip~~~~ 198 (623)
|+|++|++++..+..|+++++|++|+|++|++++..|..+.++++|+.|+|++|.+++..|..+.
T Consensus 85 L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~ 149 (477)
T 2id5_A 85 LGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFS 149 (477)
T ss_dssp EECCSSCCCSCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEECCTTCCEECTTSST
T ss_pred EECCCCcCCccCcccccCCCCCCEEECCCCccccCChhHccccccCCEEECCCCccceeChhhcc
Confidence 99999999954445689999999999999999998899999999999999999999988776543
No 298
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.47 E-value=1.3e-13 Score=128.30 Aligned_cols=108 Identities=21% Similarity=0.249 Sum_probs=92.3
Q ss_pred EEEEecCCCceeeCCccccCCCCCCEEEcCCCCCCCCCChhHhhhcCCCCEEEccCccCCCCCCCCCCCCCCCceeeccC
Q 006982 83 LNLRLTDMGLKGQFPRGIRNCSSMTGLDLSSNKLYGPLPDDISKLVGFLTSLDLSSNNFSGSIPSNLANCTYLNSLKLDH 162 (623)
Q Consensus 83 ~~l~l~~~~l~g~~p~~l~~l~~L~~L~L~~N~l~g~ip~~~~~l~~~L~~L~L~~N~l~g~ip~~~~~l~~L~~l~l~~ 162 (623)
..+++++|+| +.+|..+. ++|+.|+|++|+|++..|..+..+.+ |++|+|++|+|++..|..+.++++|++|+|++
T Consensus 15 ~~l~~~~n~l-~~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~-L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~ 90 (174)
T 2r9u_A 15 TLVNCQNIRL-ASVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVN-LQQLYFNSNKLTAIPTGVFDKLTQLTQLDLND 90 (174)
T ss_dssp SEEECCSSCC-SSCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTT-CCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred cEEEeCCCCC-CccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcC-CCEEECCCCCCCccChhHhCCcchhhEEECCC
Confidence 3578888888 47888775 89999999999999888888888755 99999999999964444578999999999999
Q ss_pred CcCCCCCCccccccccccccccccccccccCC
Q 006982 163 NRFSGQIPPQLGQLGRLKSFSVANNLLSGSIP 194 (623)
Q Consensus 163 N~~~g~iP~~l~~l~~L~~l~l~~N~l~g~ip 194 (623)
|+|++..|..+..+++|+.|+|++|.++...+
T Consensus 91 N~l~~l~~~~~~~l~~L~~L~L~~N~~~c~~~ 122 (174)
T 2r9u_A 91 NHLKSIPRGAFDNLKSLTHIYLYNNPWDCECR 122 (174)
T ss_dssp SCCCCCCTTTTTTCTTCSEEECCSSCBCTTBG
T ss_pred CccceeCHHHhccccCCCEEEeCCCCcccccc
Confidence 99996555569999999999999999986654
No 299
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.47 E-value=3.1e-14 Score=154.77 Aligned_cols=142 Identities=19% Similarity=0.154 Sum_probs=114.4
Q ss_pred CcccceeecCCCCCcEEEEEecCCCceeeCCccccCCCCCCEEEcCCCCCCCCCChhHhhhcCCCCEEEccCccCCCCCC
Q 006982 67 CKFTGVECWHPDENRVLNLRLTDMGLKGQFPRGIRNCSSMTGLDLSSNKLYGPLPDDISKLVGFLTSLDLSSNNFSGSIP 146 (623)
Q Consensus 67 c~w~gv~c~~~~~~~v~~l~l~~~~l~g~~p~~l~~l~~L~~L~L~~N~l~g~ip~~~~~l~~~L~~L~L~~N~l~g~ip 146 (623)
|.+.++.|.. ...+..|+|++|.+++..|..++++++|+.|+|++|.+++.+|..++...++|+.|+|++|.|++. |
T Consensus 109 N~l~~~~~~~--l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l~~~-~ 185 (487)
T 3oja_A 109 NNISRVSCSR--GQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDV-K 185 (487)
T ss_dssp SCCCCEEECC--CSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEE-E
T ss_pred CcCCCCCccc--cCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCccccc-c
Confidence 5566777743 356899999999999999999999999999999999999988888873235599999999999965 4
Q ss_pred CCCCCCCCCceeeccCCcCCCCCCccccccccccccccccccccccCCcccc-c-cccccccCCCCCCCC
Q 006982 147 SNLANCTYLNSLKLDHNRFSGQIPPQLGQLGRLKSFSVANNLLSGSIPTFVN-L-TLSADSVTNNQGLCG 214 (623)
Q Consensus 147 ~~~~~l~~L~~l~l~~N~~~g~iP~~l~~l~~L~~l~l~~N~l~g~ip~~~~-~-~~~~~~~~~n~~l~~ 214 (623)
. +..+++|+.|+|++|+|++ +|+.++.+++|+.|+|++|.|++ +|..+. + .+....+.+|+..|+
T Consensus 186 ~-~~~l~~L~~L~Ls~N~l~~-~~~~~~~l~~L~~L~Ls~N~l~~-lp~~l~~l~~L~~L~l~~N~l~c~ 252 (487)
T 3oja_A 186 G-QVVFAKLKTLDLSSNKLAF-MGPEFQSAAGVTWISLRNNKLVL-IEKALRFSQNLEHFDLRGNGFHCG 252 (487)
T ss_dssp C-CCCCTTCCEEECCSSCCCE-ECGGGGGGTTCSEEECTTSCCCE-ECTTCCCCTTCCEEECTTCCBCHH
T ss_pred c-cccCCCCCEEECCCCCCCC-CCHhHcCCCCccEEEecCCcCcc-cchhhccCCCCCEEEcCCCCCcCc
Confidence 3 4469999999999999996 66679999999999999999997 565443 1 455667788887765
No 300
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.47 E-value=4.5e-14 Score=143.86 Aligned_cols=113 Identities=17% Similarity=0.200 Sum_probs=60.1
Q ss_pred cEEEEEecCCCceeeCC-ccccCCCCCCEEEcCCCCCCCCCChhHhhhcCCCCEEEccCccCCC-CCCCCCCCCCCCcee
Q 006982 81 RVLNLRLTDMGLKGQFP-RGIRNCSSMTGLDLSSNKLYGPLPDDISKLVGFLTSLDLSSNNFSG-SIPSNLANCTYLNSL 158 (623)
Q Consensus 81 ~v~~l~l~~~~l~g~~p-~~l~~l~~L~~L~L~~N~l~g~ip~~~~~l~~~L~~L~L~~N~l~g-~ip~~~~~l~~L~~l 158 (623)
.+..|+|++|.+++..+ ..+.++++|++|+|++|.+.+..|..+..+. +|++|+|++|.+++ .+|..+..+++|++|
T Consensus 102 ~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~-~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L 180 (306)
T 2z66_A 102 QLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLS-SLEVLKMAGNSFQENFLPDIFTELRNLTFL 180 (306)
T ss_dssp TCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCT-TCCEEECTTCEEGGGEECSCCTTCTTCCEE
T ss_pred CCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCc-CCCEEECCCCccccccchhHHhhCcCCCEE
Confidence 34555555555554433 3455555555555555555555554444433 25555555555554 345555555555555
Q ss_pred eccCCcCCCCCCccccccccccccccccccccccCC
Q 006982 159 KLDHNRFSGQIPPQLGQLGRLKSFSVANNLLSGSIP 194 (623)
Q Consensus 159 ~l~~N~~~g~iP~~l~~l~~L~~l~l~~N~l~g~ip 194 (623)
+|++|++++..|..+..+++|+.|+|++|.+++..+
T Consensus 181 ~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~ 216 (306)
T 2z66_A 181 DLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDT 216 (306)
T ss_dssp ECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCCS
T ss_pred ECCCCCcCCcCHHHhcCCCCCCEEECCCCccCccCh
Confidence 555555555445555555555555555555554433
No 301
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=99.47 E-value=9.6e-15 Score=164.29 Aligned_cols=113 Identities=14% Similarity=0.296 Sum_probs=101.4
Q ss_pred CcEEEEEecCCCceee-----------------CCcccc--CCCCCCEEEcCCCCCCCCCChhHhhhcCCCCEEEccCcc
Q 006982 80 NRVLNLRLTDMGLKGQ-----------------FPRGIR--NCSSMTGLDLSSNKLYGPLPDDISKLVGFLTSLDLSSNN 140 (623)
Q Consensus 80 ~~v~~l~l~~~~l~g~-----------------~p~~l~--~l~~L~~L~L~~N~l~g~ip~~~~~l~~~L~~L~L~~N~ 140 (623)
.+++.|+|++|.++|. +|++++ ++++|++|+|++|++.|.+|..++++.+ |++|+|++|+
T Consensus 206 ~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~-L~~L~Ls~n~ 284 (636)
T 4eco_A 206 TKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLKALPE-MQLINVACNR 284 (636)
T ss_dssp TTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECCTTCSSCCTTTTTCSS-CCEEECTTCT
T ss_pred cCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEecCCcCCccChHHHhcCCC-CCEEECcCCC
Confidence 5688999999999996 999998 9999999999999999999999988754 9999999998
Q ss_pred -CCC-CCCCCCCCC------CCCceeeccCCcCCCCCCc--cccccccccccccccccccccCC
Q 006982 141 -FSG-SIPSNLANC------TYLNSLKLDHNRFSGQIPP--QLGQLGRLKSFSVANNLLSGSIP 194 (623)
Q Consensus 141 -l~g-~ip~~~~~l------~~L~~l~l~~N~~~g~iP~--~l~~l~~L~~l~l~~N~l~g~ip 194 (623)
++| .+|..++++ ++|++|+|++|+++ .+|. .++++++|+.|++++|+++|.+|
T Consensus 285 ~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~ip~~~~l~~l~~L~~L~L~~N~l~g~ip 347 (636)
T 4eco_A 285 GISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK-TFPVETSLQKMKKLGMLECLYNQLEGKLP 347 (636)
T ss_dssp TSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-SCCCHHHHTTCTTCCEEECCSCCCEEECC
T ss_pred CCccccchHHHHhhhccccCCCCCEEECCCCcCC-ccCchhhhccCCCCCEEeCcCCcCccchh
Confidence 998 899888776 89999999999999 8998 89999999999999999999998
No 302
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=99.46 E-value=1.1e-13 Score=154.81 Aligned_cols=140 Identities=19% Similarity=0.109 Sum_probs=117.9
Q ss_pred ccceeecCCC--------CCcEEEEEecCCCceeeCCccccCCCCCCEEEcCCCCCCCCCChhHhhhcCCCCEEEccCcc
Q 006982 69 FTGVECWHPD--------ENRVLNLRLTDMGLKGQFPRGIRNCSSMTGLDLSSNKLYGPLPDDISKLVGFLTSLDLSSNN 140 (623)
Q Consensus 69 w~gv~c~~~~--------~~~v~~l~l~~~~l~g~~p~~l~~l~~L~~L~L~~N~l~g~ip~~~~~l~~~L~~L~L~~N~ 140 (623)
+.-+.|.+.. ...++.|+|++|.+++..|..|+++++|++|+|++|.+.+..|..+.++.+ |++|+|++|+
T Consensus 14 ~~~~~c~~~~l~~iP~~l~~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~-L~~L~Ls~n~ 92 (606)
T 3t6q_A 14 NKTYNCENLGLNEIPGTLPNSTECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHR-LDTLVLTANP 92 (606)
T ss_dssp TTEEECTTSCCSSCCTTSCTTCCEEECTTCCCSEECTTTSTTCTTCSEEECTTCCCCEECTTTTTTCTT-CCEEECTTCC
T ss_pred CceEECCCCCcccCcCCCCCcCcEEEccCCccCcCChhHhccCccceEEECCCCccceeChhhccCccc-cCeeeCCCCc
Confidence 4457886532 246899999999999999999999999999999999999888989998755 9999999999
Q ss_pred CCCCCCCCCCCCCCCceeeccCCcCCCCCCccccccccccccccccccccc-cCCccccc-cccccccCCC
Q 006982 141 FSGSIPSNLANCTYLNSLKLDHNRFSGQIPPQLGQLGRLKSFSVANNLLSG-SIPTFVNL-TLSADSVTNN 209 (623)
Q Consensus 141 l~g~ip~~~~~l~~L~~l~l~~N~~~g~iP~~l~~l~~L~~l~l~~N~l~g-~ip~~~~~-~~~~~~~~~n 209 (623)
+++..|..++++++|++|+|++|++++..|..++++++|++|++++|++++ .+|....+ ++....+.+|
T Consensus 93 l~~~~~~~~~~l~~L~~L~L~~n~i~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n 163 (606)
T 3t6q_A 93 LIFMAETALSGPKALKHLFFIQTGISSIDFIPLHNQKTLESLYLGSNHISSIKLPKGFPTEKLKVLDFQNN 163 (606)
T ss_dssp CSEECTTTTSSCTTCCEEECTTSCCSCGGGSCCTTCTTCCEEECCSSCCCCCCCCTTCCCTTCCEEECCSS
T ss_pred ccccChhhhcccccccEeeccccCcccCCcchhccCCcccEEECCCCcccccCcccccCCcccCEEEcccC
Confidence 998889999999999999999999997667889999999999999999998 55665442 2333334444
No 303
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.46 E-value=2.1e-14 Score=132.65 Aligned_cols=112 Identities=22% Similarity=0.211 Sum_probs=79.2
Q ss_pred CcEEEEEecCCCce-eeCCccccCCCCCCEEEcCCCCCCCCCChhHhhhcCCCCEEEccCccCCCCCCCCCCCCCCCcee
Q 006982 80 NRVLNLRLTDMGLK-GQFPRGIRNCSSMTGLDLSSNKLYGPLPDDISKLVGFLTSLDLSSNNFSGSIPSNLANCTYLNSL 158 (623)
Q Consensus 80 ~~v~~l~l~~~~l~-g~~p~~l~~l~~L~~L~L~~N~l~g~ip~~~~~l~~~L~~L~L~~N~l~g~ip~~~~~l~~L~~l 158 (623)
..++.|+|++|+++ |.+|..+..+++|+.|+|++|.+++. ..+..+. +|++|+|++|++++.+|..+.++++|++|
T Consensus 24 ~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~-~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 100 (168)
T 2ell_A 24 AAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLP-KLKKLELSENRIFGGLDMLAEKLPNLTHL 100 (168)
T ss_dssp TSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCS-SCCEEEEESCCCCSCCCHHHHHCTTCCEE
T ss_pred ccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCC-CCCEEECcCCcCchHHHHHHhhCCCCCEE
Confidence 45777777777777 67777777777777777777777754 5566643 37777777777776666666667777777
Q ss_pred eccCCcCCCC-CCccccccccccccccccccccccCC
Q 006982 159 KLDHNRFSGQ-IPPQLGQLGRLKSFSVANNLLSGSIP 194 (623)
Q Consensus 159 ~l~~N~~~g~-iP~~l~~l~~L~~l~l~~N~l~g~ip 194 (623)
+|++|++++. .+..+..+++|+.|++++|.+++..+
T Consensus 101 ~Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~ 137 (168)
T 2ell_A 101 NLSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLND 137 (168)
T ss_dssp ECBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTT
T ss_pred eccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHH
Confidence 7777777742 12567777777777777777776554
No 304
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.45 E-value=1.6e-13 Score=133.64 Aligned_cols=114 Identities=21% Similarity=0.206 Sum_probs=100.5
Q ss_pred CcEEEEEecCCCceeeCCccccCCCCCCEEEcCCCCCCCCCChhHhhhcCCCCEEEccCccCCCCCCCCCCCCCCCceee
Q 006982 80 NRVLNLRLTDMGLKGQFPRGIRNCSSMTGLDLSSNKLYGPLPDDISKLVGFLTSLDLSSNNFSGSIPSNLANCTYLNSLK 159 (623)
Q Consensus 80 ~~v~~l~l~~~~l~g~~p~~l~~l~~L~~L~L~~N~l~g~ip~~~~~l~~~L~~L~L~~N~l~g~ip~~~~~l~~L~~l~ 159 (623)
..+..|+|++|++++..+..+..+++|+.|+|++|+|++..|..+..+. +|++|+|++|+|+ .+|..+..+++|++|+
T Consensus 64 ~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~-~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~ 141 (229)
T 3e6j_A 64 INLKELYLGSNQLGALPVGVFDSLTQLTVLDLGTNQLTVLPSAVFDRLV-HLKELFMCCNKLT-ELPRGIERLTHLTHLA 141 (229)
T ss_dssp TTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCT-TCCEEECCSSCCC-SCCTTGGGCTTCSEEE
T ss_pred cCCcEEECCCCCCCCcChhhcccCCCcCEEECCCCcCCccChhHhCcch-hhCeEeccCCccc-ccCcccccCCCCCEEE
Confidence 5689999999999766666789999999999999999955444456654 5999999999999 8999999999999999
Q ss_pred ccCCcCCCCCCccccccccccccccccccccccCCc
Q 006982 160 LDHNRFSGQIPPQLGQLGRLKSFSVANNLLSGSIPT 195 (623)
Q Consensus 160 l~~N~~~g~iP~~l~~l~~L~~l~l~~N~l~g~ip~ 195 (623)
|++|+|++..+..+..+++|+.|+|++|.+++..+.
T Consensus 142 L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~~ 177 (229)
T 3e6j_A 142 LDQNQLKSIPHGAFDRLSSLTHAYLFGNPWDCECRD 177 (229)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECTTSCBCTTBGG
T ss_pred CCCCcCCccCHHHHhCCCCCCEEEeeCCCccCCcch
Confidence 999999976667799999999999999999988763
No 305
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.44 E-value=7.2e-14 Score=145.96 Aligned_cols=135 Identities=24% Similarity=0.162 Sum_probs=111.2
Q ss_pred CCcEEEEEecCCCceeeCCccccCCCCCCEEEcCCCCCCCCCChhHhhhcCCCCEEEccCccCCCCCCCCCCCCCCCcee
Q 006982 79 ENRVLNLRLTDMGLKGQFPRGIRNCSSMTGLDLSSNKLYGPLPDDISKLVGFLTSLDLSSNNFSGSIPSNLANCTYLNSL 158 (623)
Q Consensus 79 ~~~v~~l~l~~~~l~g~~p~~l~~l~~L~~L~L~~N~l~g~ip~~~~~l~~~L~~L~L~~N~l~g~ip~~~~~l~~L~~l 158 (623)
..++..|+|++|++++..|..|.++++|+.|+|++|+|++..|..+..+. +|++|+|++|++++..|..|.++++|+.|
T Consensus 63 l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~-~L~~L~L~~N~i~~~~~~~~~~l~~L~~L 141 (361)
T 2xot_A 63 LTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSSNHLHTLDEFLFSDLQ-ALEVLLLYNNHIVVVDRNAFEDMAQLQKL 141 (361)
T ss_dssp CTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCT-TCCEEECCSSCCCEECTTTTTTCTTCCEE
T ss_pred ccccCEEECCCCcCCccChhhccCCCCCCEEECCCCcCCcCCHHHhCCCc-CCCEEECCCCcccEECHHHhCCcccCCEE
Confidence 35789999999999999888999999999999999999965555677764 59999999999998878899999999999
Q ss_pred eccCCcCCCCCCccc----cccccccccccccccccccCCcccc-cc---ccccccCCCCCCCCC
Q 006982 159 KLDHNRFSGQIPPQL----GQLGRLKSFSVANNLLSGSIPTFVN-LT---LSADSVTNNQGLCGE 215 (623)
Q Consensus 159 ~l~~N~~~g~iP~~l----~~l~~L~~l~l~~N~l~g~ip~~~~-~~---~~~~~~~~n~~l~~~ 215 (623)
+|++|+|++ +|..+ ..+++|+.|+|++|+|++..+..+. +. +....+.+|+..|..
T Consensus 142 ~L~~N~l~~-l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~~~l~~l~l~~N~~~C~C 205 (361)
T 2xot_A 142 YLSQNQISR-FPVELIKDGNKLPKLMLLDLSSNKLKKLPLTDLQKLPAWVKNGLYLHNNPLECDC 205 (361)
T ss_dssp ECCSSCCCS-CCGGGTC----CTTCCEEECCSSCCCCCCHHHHHHSCHHHHTTEECCSSCEECCH
T ss_pred ECCCCcCCe-eCHHHhcCcccCCcCCEEECCCCCCCccCHHHhhhccHhhcceEEecCCCccCCc
Confidence 999999995 77665 6799999999999999965443332 11 244678889888863
No 306
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.44 E-value=3.6e-13 Score=125.48 Aligned_cols=128 Identities=29% Similarity=0.318 Sum_probs=102.5
Q ss_pred EEEEecCCCceeeCCccccCCCCCCEEEcCCCCCCCCCChhHhhhcCCCCEEEccCccCCCCCCCCCCCCCCCceeeccC
Q 006982 83 LNLRLTDMGLKGQFPRGIRNCSSMTGLDLSSNKLYGPLPDDISKLVGFLTSLDLSSNNFSGSIPSNLANCTYLNSLKLDH 162 (623)
Q Consensus 83 ~~l~l~~~~l~g~~p~~l~~l~~L~~L~L~~N~l~g~ip~~~~~l~~~L~~L~L~~N~l~g~ip~~~~~l~~L~~l~l~~ 162 (623)
..+++++++++ .+|..+ .++|+.|+|++|++++..|..+..+. +|++|+|++|++++..|..++++++|++|+|++
T Consensus 10 ~~l~~~~~~l~-~~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~-~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 85 (177)
T 2o6r_A 10 TEIRCNSKGLT-SVPTGI--PSSATRLELESNKLQSLPHGVFDKLT-QLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHE 85 (177)
T ss_dssp TEEECCSSCCS-SCCTTC--CTTCSEEECCSSCCCCCCTTTTTTCT-TCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CEEEecCCCCc-cCCCCC--CCCCcEEEeCCCcccEeCHHHhcCcc-cccEEECCCCcceEeChhHccCCCccCEEECCC
Confidence 46889999987 466554 47999999999999965555566754 599999999999966556689999999999999
Q ss_pred CcCCCCCCccccccccccccccccccccccCCcccc-c-cccccccCCCCCCCC
Q 006982 163 NRFSGQIPPQLGQLGRLKSFSVANNLLSGSIPTFVN-L-TLSADSVTNNQGLCG 214 (623)
Q Consensus 163 N~~~g~iP~~l~~l~~L~~l~l~~N~l~g~ip~~~~-~-~~~~~~~~~n~~l~~ 214 (623)
|++++..|..+..+++|+.|++++|++++..+..+. + .+....+.+|+..|.
T Consensus 86 N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~ 139 (177)
T 2o6r_A 86 NKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCS 139 (177)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCC
T ss_pred CCccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeecc
Confidence 999977777789999999999999999976665433 2 455667788876654
No 307
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=99.44 E-value=6.4e-14 Score=156.71 Aligned_cols=134 Identities=20% Similarity=0.202 Sum_probs=69.0
Q ss_pred cEEEEEecCCCceeeCCccccCCCCCCEEEcCCCCCCCC-CChhHhhhcCCCCEEEccCccCCCCCCCCCCCCCCCceee
Q 006982 81 RVLNLRLTDMGLKGQFPRGIRNCSSMTGLDLSSNKLYGP-LPDDISKLVGFLTSLDLSSNNFSGSIPSNLANCTYLNSLK 159 (623)
Q Consensus 81 ~v~~l~l~~~~l~g~~p~~l~~l~~L~~L~L~~N~l~g~-ip~~~~~l~~~L~~L~L~~N~l~g~ip~~~~~l~~L~~l~ 159 (623)
.++.|++++|.+++.+|..++++++|+.|+|++|.+++. +|..+..+.+ |+.|+|++|++++.+|..++++++|++|+
T Consensus 425 ~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~-L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~ 503 (606)
T 3vq2_A 425 KLLYLDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFANTTN-LTFLDLSKCQLEQISWGVFDTLHRLQLLN 503 (606)
T ss_dssp TCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTT-CCEEECTTSCCCEECTTTTTTCTTCCEEE
T ss_pred cCCEEECcCCCCCccchhhhcCCCCCCEEECCCCcCCCcchHHhhccCCC-CCEEECCCCcCCccChhhhcccccCCEEE
Confidence 344455555555555555555555555555555555542 4444444332 55555555555555555555555555555
Q ss_pred ccCCcCCCCCCccccccccccccccccccccccCCcccc-c--cccccccCCCCCCCCCC
Q 006982 160 LDHNRFSGQIPPQLGQLGRLKSFSVANNLLSGSIPTFVN-L--TLSADSVTNNQGLCGEP 216 (623)
Q Consensus 160 l~~N~~~g~iP~~l~~l~~L~~l~l~~N~l~g~ip~~~~-~--~~~~~~~~~n~~l~~~~ 216 (623)
|++|++++.+|..++++++|+.|+|++|+++ .+|..+. + .+....+.+|+..|..+
T Consensus 504 Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~-~~p~~~~~l~~~L~~l~l~~N~~~c~c~ 562 (606)
T 3vq2_A 504 MSHNNLLFLDSSHYNQLYSLSTLDCSFNRIE-TSKGILQHFPKSLAFFNLTNNSVACICE 562 (606)
T ss_dssp CCSSCCSCEEGGGTTTCTTCCEEECTTSCCC-CEESCGGGSCTTCCEEECCSCCCCCSST
T ss_pred CCCCcCCCcCHHHccCCCcCCEEECCCCcCc-ccCHhHhhhcccCcEEEccCCCcccCCc
Confidence 5555555555555555555555555555555 3333221 1 13344556666665443
No 308
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=99.44 E-value=2.7e-13 Score=153.82 Aligned_cols=132 Identities=23% Similarity=0.220 Sum_probs=110.7
Q ss_pred CCCcccceeecCCC--------CCcEEEEEecCCCceeeCCccccCCCCCCEEEcCCCCCCCCCChhHhhhcCCCCEEEc
Q 006982 65 FICKFTGVECWHPD--------ENRVLNLRLTDMGLKGQFPRGIRNCSSMTGLDLSSNKLYGPLPDDISKLVGFLTSLDL 136 (623)
Q Consensus 65 ~~c~w~gv~c~~~~--------~~~v~~l~l~~~~l~g~~p~~l~~l~~L~~L~L~~N~l~g~ip~~~~~l~~~L~~L~L 136 (623)
|.|.++-|.|++.. ..+++.|+|++|++++..+..|+++++|++|+|++|.+++..|..++++.. |++|+|
T Consensus 2 C~~~~~~~~cs~~~L~~ip~~~~~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~-L~~L~L 80 (680)
T 1ziw_A 2 CTVSHEVADCSHLKLTQVPDDLPTNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPM-LKVLNL 80 (680)
T ss_dssp --CBSSEEECCSSCCSSCCSCSCTTCSEEECCSSCCCCCCGGGGGGGTTCSEEECCSSCCCCCCTTHHHHCTT-CCEEEC
T ss_pred ceeECCeeECCCCCccccccccCCCCcEEECCCCCCCCcCHHHHhCCCcCcEEECCCCccCccCHHHHhcccC-cCEEEC
Confidence 34555567775421 357899999999999988888999999999999999999888888888754 999999
Q ss_pred cCccCCCCCCCCCCCCCCCceeeccCCcCCCCCCccccccccccccccccccccccCCccc
Q 006982 137 SSNNFSGSIPSNLANCTYLNSLKLDHNRFSGQIPPQLGQLGRLKSFSVANNLLSGSIPTFV 197 (623)
Q Consensus 137 ~~N~l~g~ip~~~~~l~~L~~l~l~~N~~~g~iP~~l~~l~~L~~l~l~~N~l~g~ip~~~ 197 (623)
++|++++..+..|+++++|++|+|++|++++..|..++++++|++|+|++|.+++..|..+
T Consensus 81 ~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~ 141 (680)
T 1ziw_A 81 QHNELSQLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQ 141 (680)
T ss_dssp CSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCSCTTTTCTTCCEEECCSSCCSCCCCCSS
T ss_pred CCCccCccChhhhccCCCCCEEECCCCccCccChhHccccCCCCEEECCCCcccccCchhh
Confidence 9999995433469999999999999999997777889999999999999999999888654
No 309
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.44 E-value=7.9e-14 Score=145.12 Aligned_cols=142 Identities=23% Similarity=0.282 Sum_probs=112.6
Q ss_pred CCCcccceeecCCC----------CCcEEEEEecCCCceeeCCccccCCCCCCEEEcCCCCCCCCCChhHhhhcCCCCEE
Q 006982 65 FICKFTGVECWHPD----------ENRVLNLRLTDMGLKGQFPRGIRNCSSMTGLDLSSNKLYGPLPDDISKLVGFLTSL 134 (623)
Q Consensus 65 ~~c~w~gv~c~~~~----------~~~v~~l~l~~~~l~g~~p~~l~~l~~L~~L~L~~N~l~g~ip~~~~~l~~~L~~L 134 (623)
+.|.|.|+ |+... ...++.|+|++|++++..+..+.++++|++|+|++|.+++..|..+.++. +|++|
T Consensus 28 ~~C~~~~~-c~~~~~~l~~iP~~~~~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~-~L~~L 105 (353)
T 2z80_A 28 LSCDRNGI-CKGSSGSLNSIPSGLTEAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLG-SLEHL 105 (353)
T ss_dssp CEECTTSE-EECCSTTCSSCCTTCCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCT-TCCEE
T ss_pred CCCCCCeE-eeCCCCCcccccccccccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCC-CCCEE
Confidence 57999987 64321 23789999999999988777899999999999999999987777888865 49999
Q ss_pred EccCccCCCCCCCC-CCCCCCCceeeccCCcCCCCCCc--ccccccccccccccccc-ccccCCcccc-c-cccccccCC
Q 006982 135 DLSSNNFSGSIPSN-LANCTYLNSLKLDHNRFSGQIPP--QLGQLGRLKSFSVANNL-LSGSIPTFVN-L-TLSADSVTN 208 (623)
Q Consensus 135 ~L~~N~l~g~ip~~-~~~l~~L~~l~l~~N~~~g~iP~--~l~~l~~L~~l~l~~N~-l~g~ip~~~~-~-~~~~~~~~~ 208 (623)
+|++|++++ +|.. ++++++|++|+|++|+++ .+|. .+.++++|+.|++++|+ +++..|..+. + .+....+.+
T Consensus 106 ~Ls~n~l~~-~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~ 183 (353)
T 2z80_A 106 DLSYNYLSN-LSSSWFKPLSSLTFLNLLGNPYK-TLGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTFLEELEIDA 183 (353)
T ss_dssp ECCSSCCSS-CCHHHHTTCTTCSEEECTTCCCS-SSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEE
T ss_pred ECCCCcCCc-CCHhHhCCCccCCEEECCCCCCc-ccCchhhhccCCCCcEEECCCCccccccCHHHccCCCCCCEEECCC
Confidence 999999995 5554 899999999999999999 5665 78999999999999995 5555454433 1 233344444
Q ss_pred CC
Q 006982 209 NQ 210 (623)
Q Consensus 209 n~ 210 (623)
|.
T Consensus 184 n~ 185 (353)
T 2z80_A 184 SD 185 (353)
T ss_dssp TT
T ss_pred CC
Confidence 43
No 310
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.44 E-value=3.8e-13 Score=138.70 Aligned_cols=143 Identities=22% Similarity=0.275 Sum_probs=117.6
Q ss_pred CCCCCcccceeecCCC--------CCcEEEEEecCCCceeeCCccccCCCCCCEEEcCCCCCCCCCChhHhhhcCCCCEE
Q 006982 63 EGFICKFTGVECWHPD--------ENRVLNLRLTDMGLKGQFPRGIRNCSSMTGLDLSSNKLYGPLPDDISKLVGFLTSL 134 (623)
Q Consensus 63 ~~~~c~w~gv~c~~~~--------~~~v~~l~l~~~~l~g~~p~~l~~l~~L~~L~L~~N~l~g~ip~~~~~l~~~L~~L 134 (623)
.+|.|.|+.+.|++.. ...++.|+|++|++++..|..++++++|++|+|++|.+++..|..+.++.+ |++|
T Consensus 29 ~~c~c~l~~l~~~~~~l~~ip~~~~~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~-L~~L 107 (332)
T 2ft3_A 29 FGCHCHLRVVQCSDLGLKAVPKEISPDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRK-LQKL 107 (332)
T ss_dssp SSCEEETTEEECCSSCCSSCCSCCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTT-CCEE
T ss_pred CCCcccCCEEECCCCCccccCCCCCCCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCC-CCEE
Confidence 3456899999997532 236889999999999988889999999999999999999877888988754 9999
Q ss_pred EccCccCCCCCCCCCCCCCCCceeeccCCcCCCCCCcccccccccccccccccccc--ccCCcccc-ccccccccCCC
Q 006982 135 DLSSNNFSGSIPSNLANCTYLNSLKLDHNRFSGQIPPQLGQLGRLKSFSVANNLLS--GSIPTFVN-LTLSADSVTNN 209 (623)
Q Consensus 135 ~L~~N~l~g~ip~~~~~l~~L~~l~l~~N~~~g~iP~~l~~l~~L~~l~l~~N~l~--g~ip~~~~-~~~~~~~~~~n 209 (623)
+|++|+++ .+|..+. ++|++|+|++|++++..+..+.++++|+.|++++|.++ |..|..+. +++....+++|
T Consensus 108 ~L~~n~l~-~l~~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~L~~L~l~~n 182 (332)
T 2ft3_A 108 YISKNHLV-EIPPNLP--SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGLKLNYLRISEA 182 (332)
T ss_dssp ECCSSCCC-SCCSSCC--TTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSCCCSCCBCCSS
T ss_pred ECCCCcCC-ccCcccc--ccCCEEECCCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCCccCEEECcCC
Confidence 99999999 7898776 89999999999999766667899999999999999996 35565433 23344444444
No 311
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.43 E-value=1.5e-13 Score=153.45 Aligned_cols=116 Identities=14% Similarity=0.073 Sum_probs=80.6
Q ss_pred cEEEEEecCCCceeeCCccccCCCCCCEEEcCCCCCCCCCChhHhhhcCCCCEEEccCccCCCCCCCCCCCCCCCceeec
Q 006982 81 RVLNLRLTDMGLKGQFPRGIRNCSSMTGLDLSSNKLYGPLPDDISKLVGFLTSLDLSSNNFSGSIPSNLANCTYLNSLKL 160 (623)
Q Consensus 81 ~v~~l~l~~~~l~g~~p~~l~~l~~L~~L~L~~N~l~g~ip~~~~~l~~~L~~L~L~~N~l~g~ip~~~~~l~~L~~l~l 160 (623)
.+..|+++++.+....+..++++++|++|+|++|.+++..|..++.+.. |++|+|++|.+++..|..|+++++|++|+|
T Consensus 52 ~l~~l~l~~~~l~~lp~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~-L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 130 (597)
T 3oja_B 52 NQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHT-IQKLYMGFNAIRYLPPHVFQNVPLLTVLVL 130 (597)
T ss_dssp CCSEEEESSCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTT-CCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CceEEEeeCCCCCCcCHHHHccCCCCcEEECCCCCCCCCChHHhcCCCC-CCEEECCCCcCCCCCHHHHcCCCCCCEEEe
Confidence 3456777777776555555677777777777777777666666766543 777777777777766666777777777777
Q ss_pred cCCcCCCCCCccccccccccccccccccccccCCccc
Q 006982 161 DHNRFSGQIPPQLGQLGRLKSFSVANNLLSGSIPTFV 197 (623)
Q Consensus 161 ~~N~~~g~iP~~l~~l~~L~~l~l~~N~l~g~ip~~~ 197 (623)
++|+|++..|..++++++|+.|+|++|.+++.+|..+
T Consensus 131 ~~n~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~ 167 (597)
T 3oja_B 131 ERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTF 167 (597)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTT
T ss_pred eCCCCCCCCHHHhccCCCCCEEEeeCCcCCCCChhhh
Confidence 7777774333345777777777777777777766544
No 312
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.43 E-value=1.4e-13 Score=142.93 Aligned_cols=111 Identities=18% Similarity=0.208 Sum_probs=92.1
Q ss_pred CCcccceeecCCCCCcEEEEEecCCCceeeCCccccCCCCCCEEEcCC-CCCCCCCChhHhhhcCCCCEEEccCccCCCC
Q 006982 66 ICKFTGVECWHPDENRVLNLRLTDMGLKGQFPRGIRNCSSMTGLDLSS-NKLYGPLPDDISKLVGFLTSLDLSSNNFSGS 144 (623)
Q Consensus 66 ~c~w~gv~c~~~~~~~v~~l~l~~~~l~g~~p~~l~~l~~L~~L~L~~-N~l~g~ip~~~~~l~~~L~~L~L~~N~l~g~ 144 (623)
.|.|..|.|++. |+|++ ||. |+.+++|+.|+|++ |.|++..|..+..+.+ |+.|+|++|+|+|.
T Consensus 7 ~C~~~~v~~~~~------------n~l~~-ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~-L~~L~l~~N~l~~~ 71 (347)
T 2ifg_A 7 PHGSSGLRCTRD------------GALDS-LHH-LPGAENLTELYIENQQHLQHLELRDLRGLGE-LRNLTIVKSGLRFV 71 (347)
T ss_dssp CSSSSCEECCSS------------CCCTT-TTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCC-CSEEECCSSCCCEE
T ss_pred cccCCEEEcCCC------------CCCCc-cCC-CCCCCCeeEEEccCCCCCCCcChhHhccccC-CCEEECCCCcccee
Confidence 489988888431 15654 888 99999999999996 9999766677888654 99999999999998
Q ss_pred CCCCCCCCCCCceeeccCCcCCCCCCcccccccccccccccccccccc
Q 006982 145 IPSNLANCTYLNSLKLDHNRFSGQIPPQLGQLGRLKSFSVANNLLSGS 192 (623)
Q Consensus 145 ip~~~~~l~~L~~l~l~~N~~~g~iP~~l~~l~~L~~l~l~~N~l~g~ 192 (623)
.|..|++|++|+.|+|++|+|++..|..+..++ |+.|+|++|.|...
T Consensus 72 ~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~-L~~l~l~~N~~~c~ 118 (347)
T 2ifg_A 72 APDAFHFTPRLSRLNLSFNALESLSWKTVQGLS-LQELVLSGNPLHCS 118 (347)
T ss_dssp CTTGGGSCSCCCEEECCSSCCSCCCSTTTCSCC-CCEEECCSSCCCCC
T ss_pred CHHHhcCCcCCCEEeCCCCccceeCHHHcccCC-ceEEEeeCCCccCC
Confidence 888899999999999999999964444444454 99999999999864
No 313
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.42 E-value=1.4e-13 Score=154.41 Aligned_cols=135 Identities=22% Similarity=0.244 Sum_probs=118.4
Q ss_pred CcEEEEEecCCCceeeCCccccCCCCCCEEEcCCCCCC-CCCChhHhhhcCCCCEEEccCccCCCCCCCCCCCCCCCcee
Q 006982 80 NRVLNLRLTDMGLKGQFPRGIRNCSSMTGLDLSSNKLY-GPLPDDISKLVGFLTSLDLSSNNFSGSIPSNLANCTYLNSL 158 (623)
Q Consensus 80 ~~v~~l~l~~~~l~g~~p~~l~~l~~L~~L~L~~N~l~-g~ip~~~~~l~~~L~~L~L~~N~l~g~ip~~~~~l~~L~~l 158 (623)
..+..++++.|.+.+..|..+..+++|+.|+|++|++. +.+|..+..+. +|++|||++|++++.+|..|+++++|++|
T Consensus 445 ~~l~~l~ls~n~l~~~~~~~~~~~~~L~~L~Ls~N~~~~~~~~~~~~~l~-~L~~L~Ls~N~L~~l~~~~f~~l~~L~~L 523 (635)
T 4g8a_A 445 RNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELR-NLTFLDLSQCQLEQLSPTAFNSLSSLQVL 523 (635)
T ss_dssp TTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCT-TCCEEECTTSCCCEECTTTTTTCTTCCEE
T ss_pred cccccccccccccccccccccccchhhhhhhhhhcccccccCchhhhhcc-ccCEEECCCCccCCcChHHHcCCCCCCEE
Confidence 35678899999999999999999999999999999854 44677777764 59999999999999889999999999999
Q ss_pred eccCCcCCCCCCccccccccccccccccccccccCCcccc-c--cccccccCCCCCCCCC
Q 006982 159 KLDHNRFSGQIPPQLGQLGRLKSFSVANNLLSGSIPTFVN-L--TLSADSVTNNQGLCGE 215 (623)
Q Consensus 159 ~l~~N~~~g~iP~~l~~l~~L~~l~l~~N~l~g~ip~~~~-~--~~~~~~~~~n~~l~~~ 215 (623)
+|++|+|++..|..+..+++|+.|+|++|+|++.+|..+. + ++....+.+|++.|.+
T Consensus 524 ~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~~L~~L~L~~Np~~C~C 583 (635)
T 4g8a_A 524 NMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTC 583 (635)
T ss_dssp ECTTSCCCBCCCGGGTTCTTCCEEECTTSCCCBCCSSCTTCCCTTCCEEECTTCCBCCSG
T ss_pred ECCCCcCCCCChhHHhCCCCCCEEECCCCcCCCCCHHHHHhhhCcCCEEEeeCCCCcccC
Confidence 9999999998888999999999999999999999998654 2 4566788999999864
No 314
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.42 E-value=3.8e-13 Score=136.00 Aligned_cols=113 Identities=26% Similarity=0.263 Sum_probs=86.5
Q ss_pred CcEEEEEecCCCceeeCCccccCCCCCCEEEcCCCCCCCCCChhHhhhcCCCCEEEccCccCCCCCCCCCCCCCCCceee
Q 006982 80 NRVLNLRLTDMGLKGQFPRGIRNCSSMTGLDLSSNKLYGPLPDDISKLVGFLTSLDLSSNNFSGSIPSNLANCTYLNSLK 159 (623)
Q Consensus 80 ~~v~~l~l~~~~l~g~~p~~l~~l~~L~~L~L~~N~l~g~ip~~~~~l~~~L~~L~L~~N~l~g~ip~~~~~l~~L~~l~ 159 (623)
..++.|+|++|.+++..|..+.++++|+.|+|++|.+++ +|.. +.+ ++|++|+|++|+++ .+|..+..+++|++|+
T Consensus 31 ~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~-~~~~-~~l-~~L~~L~Ls~N~l~-~l~~~~~~l~~L~~L~ 106 (290)
T 1p9a_G 31 KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTK-LQVD-GTL-PVLGTLDLSHNQLQ-SLPLLGQTLPALTVLD 106 (290)
T ss_dssp TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCE-EECC-SCC-TTCCEEECCSSCCS-SCCCCTTTCTTCCEEE
T ss_pred CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCc-ccCC-CCC-CcCCEEECCCCcCC-cCchhhccCCCCCEEE
Confidence 467888999999988888888888888888888888884 4443 443 34888888888887 6777777788888888
Q ss_pred ccCCcCCCCCCccccccccccccccccccccccCCcc
Q 006982 160 LDHNRFSGQIPPQLGQLGRLKSFSVANNLLSGSIPTF 196 (623)
Q Consensus 160 l~~N~~~g~iP~~l~~l~~L~~l~l~~N~l~g~ip~~ 196 (623)
|++|++++..|..+..+++|+.|+|++|++++..|..
T Consensus 107 l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~ 143 (290)
T 1p9a_G 107 VSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGL 143 (290)
T ss_dssp CCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTT
T ss_pred CCCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhh
Confidence 8888888665667777888888888888887655543
No 315
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=99.41 E-value=5e-14 Score=162.17 Aligned_cols=128 Identities=16% Similarity=0.246 Sum_probs=104.4
Q ss_pred CcEEEEEecCCCcee-----------------eCCcccc--CCCCCCEEEcCCCCCCCCCChhHhhhcCCCCEEEccCcc
Q 006982 80 NRVLNLRLTDMGLKG-----------------QFPRGIR--NCSSMTGLDLSSNKLYGPLPDDISKLVGFLTSLDLSSNN 140 (623)
Q Consensus 80 ~~v~~l~l~~~~l~g-----------------~~p~~l~--~l~~L~~L~L~~N~l~g~ip~~~~~l~~~L~~L~L~~N~ 140 (623)
.+++.|+|++|.|+| .+|++++ +|++|++|+|++|++.|.+|..++++.+ |+.|+|++|+
T Consensus 448 ~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~L~~-L~~L~Ls~N~ 526 (876)
T 4ecn_A 448 TKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTDVELYNCPNMTQLPDFLYDLPE-LQSLNIACNR 526 (876)
T ss_dssp TTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEESCTTCCSCCGGGGGCSS-CCEEECTTCT
T ss_pred CCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCCCEEECcCCCCCccChHHHhCCCC-CCEEECcCCC
Confidence 568889999999998 4899988 9999999999999999999998988754 9999999998
Q ss_pred -CCC-CCCCCCCCCC-------CCceeeccCCcCCCCCCc--cccccccccccccccccccccCCccccc-cccccccCC
Q 006982 141 -FSG-SIPSNLANCT-------YLNSLKLDHNRFSGQIPP--QLGQLGRLKSFSVANNLLSGSIPTFVNL-TLSADSVTN 208 (623)
Q Consensus 141 -l~g-~ip~~~~~l~-------~L~~l~l~~N~~~g~iP~--~l~~l~~L~~l~l~~N~l~g~ip~~~~~-~~~~~~~~~ 208 (623)
|+| .+|..+++++ +|++|+|++|+++ .+|. .++++++|+.|+|++|+++ .||.+..+ .+....+.+
T Consensus 527 ~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~l~~L~~L~~L~Ls~N~l~-~lp~~~~L~~L~~L~Ls~ 604 (876)
T 4ecn_A 527 GISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE-EFPASASLQKMVKLGLLDCVHNKVR-HLEAFGTNVKLTDLKLDY 604 (876)
T ss_dssp TSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-BCCCHHHHTTCTTCCEEECTTSCCC-BCCCCCTTSEESEEECCS
T ss_pred CcccccchHHHHhhhhcccccCCccEEEeeCCcCC-ccCChhhhhcCCCCCEEECCCCCcc-cchhhcCCCcceEEECcC
Confidence 998 8887766665 8999999999999 8888 8899999999999999998 88833222 333444555
Q ss_pred CC
Q 006982 209 NQ 210 (623)
Q Consensus 209 n~ 210 (623)
|.
T Consensus 605 N~ 606 (876)
T 4ecn_A 605 NQ 606 (876)
T ss_dssp SC
T ss_pred Cc
Confidence 54
No 316
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.40 E-value=4.5e-13 Score=144.37 Aligned_cols=130 Identities=16% Similarity=0.154 Sum_probs=110.6
Q ss_pred CCCc--ccceeecCCC--------CCcEEEEEecCCCceeeCCccccCCCCCCEEEcCCCCCCCCCChhHhhhcCCCCEE
Q 006982 65 FICK--FTGVECWHPD--------ENRVLNLRLTDMGLKGQFPRGIRNCSSMTGLDLSSNKLYGPLPDDISKLVGFLTSL 134 (623)
Q Consensus 65 ~~c~--w~gv~c~~~~--------~~~v~~l~l~~~~l~g~~p~~l~~l~~L~~L~L~~N~l~g~ip~~~~~l~~~L~~L 134 (623)
|.|. |..|.|.+.. ...++.|+|++|++++..|..|+++++|+.|+|++|.+++..|..+..+. +|++|
T Consensus 50 C~C~~~~~~v~c~~~~l~~iP~~~~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~-~L~~L 128 (452)
T 3zyi_A 50 CSCSNQFSKVVCTRRGLSEVPQGIPSNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLA-SLNTL 128 (452)
T ss_dssp SEECSSSCEEECCSSCCSSCCSCCCTTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCT-TCCEE
T ss_pred CEECCCCcEEEECCCCcCccCCCCCCCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcc-cCCEE
Confidence 4454 5678886532 24689999999999999999999999999999999999987778888865 49999
Q ss_pred EccCccCCCCCCCCCCCCCCCceeeccCCcCCCCCCccccccccccccccccccccccCCc
Q 006982 135 DLSSNNFSGSIPSNLANCTYLNSLKLDHNRFSGQIPPQLGQLGRLKSFSVANNLLSGSIPT 195 (623)
Q Consensus 135 ~L~~N~l~g~ip~~~~~l~~L~~l~l~~N~~~g~iP~~l~~l~~L~~l~l~~N~l~g~ip~ 195 (623)
+|++|++++..|..+.++++|++|+|++|++++..+..+.++++|+.|++++|+..+.+|.
T Consensus 129 ~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~ 189 (452)
T 3zyi_A 129 ELFDNWLTVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISE 189 (452)
T ss_dssp ECCSSCCSBCCTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECT
T ss_pred ECCCCcCCccChhhhcccCCCCEEECCCCCcceeCHhHHhcCCcccEEeCCCCCCccccCh
Confidence 9999999966566699999999999999999966666889999999999999766666664
No 317
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.40 E-value=5.9e-13 Score=142.88 Aligned_cols=130 Identities=16% Similarity=0.175 Sum_probs=109.4
Q ss_pred CCCc--ccceeecCCC--------CCcEEEEEecCCCceeeCCccccCCCCCCEEEcCCCCCCCCCChhHhhhcCCCCEE
Q 006982 65 FICK--FTGVECWHPD--------ENRVLNLRLTDMGLKGQFPRGIRNCSSMTGLDLSSNKLYGPLPDDISKLVGFLTSL 134 (623)
Q Consensus 65 ~~c~--w~gv~c~~~~--------~~~v~~l~l~~~~l~g~~p~~l~~l~~L~~L~L~~N~l~g~ip~~~~~l~~~L~~L 134 (623)
|.|. |..|.|.+.. ...++.|+|++|++++..+..|.++++|+.|+|++|.+++..|..+..+. +|++|
T Consensus 39 C~C~~~~~~v~c~~~~l~~iP~~~~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~-~L~~L 117 (440)
T 3zyj_A 39 CSCSNQFSKVICVRKNLREVPDGISTNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLA-NLNTL 117 (440)
T ss_dssp SEECTTSCEEECCSCCCSSCCSCCCTTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCS-SCCEE
T ss_pred CEeCCCCCEEEeCCCCcCcCCCCCCCCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCc-cCCEE
Confidence 4454 5678996532 24578899999999999999999999999999999999976667787765 59999
Q ss_pred EccCccCCCCCCCCCCCCCCCceeeccCCcCCCCCCccccccccccccccccccccccCCc
Q 006982 135 DLSSNNFSGSIPSNLANCTYLNSLKLDHNRFSGQIPPQLGQLGRLKSFSVANNLLSGSIPT 195 (623)
Q Consensus 135 ~L~~N~l~g~ip~~~~~l~~L~~l~l~~N~~~g~iP~~l~~l~~L~~l~l~~N~l~g~ip~ 195 (623)
+|++|++++..+..+..+++|++|+|++|++++..+..+.++++|+.|+|++|+..+.+|.
T Consensus 118 ~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~ 178 (440)
T 3zyj_A 118 ELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISE 178 (440)
T ss_dssp ECCSSCCSSCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECT
T ss_pred ECCCCcCCeeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCc
Confidence 9999999965555799999999999999999976666889999999999999776666664
No 318
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=99.40 E-value=3e-13 Score=157.17 Aligned_cols=124 Identities=19% Similarity=0.138 Sum_probs=94.5
Q ss_pred CcccceeecCCCCCcEEEEEecCCCceeeCCccccCCCCCCEEEcCCCCCCCCC-ChhHhhhcCCCCEEEccCccCCCCC
Q 006982 67 CKFTGVECWHPDENRVLNLRLTDMGLKGQFPRGIRNCSSMTGLDLSSNKLYGPL-PDDISKLVGFLTSLDLSSNNFSGSI 145 (623)
Q Consensus 67 c~w~gv~c~~~~~~~v~~l~l~~~~l~g~~p~~l~~l~~L~~L~L~~N~l~g~i-p~~~~~l~~~L~~L~L~~N~l~g~i 145 (623)
|+|..|.+ -..+++.|+|++|.+++..|..|+++++|++|+|++|.+.+.| |..+.++. +|++|+|++|++++..
T Consensus 14 ~~L~~vP~---lp~~l~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~-~L~~L~Ls~N~l~~~~ 89 (844)
T 3j0a_A 14 CNLTQVPQ---VLNTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLP-NLRILDLGSSKIYFLH 89 (844)
T ss_dssp CCSSCCCS---SCTTCCEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCT-TCCEEECTTCCCCEEC
T ss_pred CCCCCCCC---CCCCcCEEECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCC-CCCEEECCCCcCcccC
Confidence 45666666 2457888999999888888888888888888888888777777 55566654 4888888888888777
Q ss_pred CCCCCCCCCCceeeccCCcCCCCCCcc--ccccccccccccccccccccCC
Q 006982 146 PSNLANCTYLNSLKLDHNRFSGQIPPQ--LGQLGRLKSFSVANNLLSGSIP 194 (623)
Q Consensus 146 p~~~~~l~~L~~l~l~~N~~~g~iP~~--l~~l~~L~~l~l~~N~l~g~ip 194 (623)
|..|+++++|++|+|++|++++.+|.. ++++++|+.|+|++|.+++..|
T Consensus 90 p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~ 140 (844)
T 3j0a_A 90 PDAFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYL 140 (844)
T ss_dssp TTSSCSCSSCCCEECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCC
T ss_pred HhHccCCcccCEeeCcCCCCCcccccCccccccCCCCEEECCCCccccccc
Confidence 778888888888888888888766665 7777788888888887777654
No 319
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.39 E-value=2.2e-13 Score=149.94 Aligned_cols=122 Identities=30% Similarity=0.467 Sum_probs=97.7
Q ss_pred cccce-eecCCCCCcEEEEEecCCCceeeCCccccCCCCCCEEEcCCCCCCCCCChhHhhhcCCCCEEEccCccCCCCCC
Q 006982 68 KFTGV-ECWHPDENRVLNLRLTDMGLKGQFPRGIRNCSSMTGLDLSSNKLYGPLPDDISKLVGFLTSLDLSSNNFSGSIP 146 (623)
Q Consensus 68 ~w~gv-~c~~~~~~~v~~l~l~~~~l~g~~p~~l~~l~~L~~L~L~~N~l~g~ip~~~~~l~~~L~~L~L~~N~l~g~ip 146 (623)
.|.|+ .|.. ++++.|+|++|+|++ +|+.+. ++|++|+|++|+|+ .|| . . .++|++|+|++|+|++ ||
T Consensus 49 ~~~~l~~C~~---~~L~~L~Ls~n~L~~-lp~~l~--~~L~~L~Ls~N~l~-~ip-~--~-l~~L~~L~Ls~N~l~~-ip 116 (571)
T 3cvr_A 49 AVSLLKECLI---NQFSELQLNRLNLSS-LPDNLP--PQITVLEITQNALI-SLP-E--L-PASLEYLDACDNRLST-LP 116 (571)
T ss_dssp HHHHHHHHHH---TTCSEEECCSSCCSC-CCSCCC--TTCSEEECCSSCCS-CCC-C--C-CTTCCEEECCSSCCSC-CC
T ss_pred hhhhcccccc---CCccEEEeCCCCCCc-cCHhHc--CCCCEEECcCCCCc-ccc-c--c-cCCCCEEEccCCCCCC-cc
Confidence 79999 7853 579999999999998 888774 88999999999999 788 2 2 3459999999999997 88
Q ss_pred CCCCCCCCCceeeccCCcCCCCCCccccccccccccccccccccccCCccccccccccccCCCC
Q 006982 147 SNLANCTYLNSLKLDHNRFSGQIPPQLGQLGRLKSFSVANNLLSGSIPTFVNLTLSADSVTNNQ 210 (623)
Q Consensus 147 ~~~~~l~~L~~l~l~~N~~~g~iP~~l~~l~~L~~l~l~~N~l~g~ip~~~~~~~~~~~~~~n~ 210 (623)
. +.+ +|++|+|++|+|++ +|. .+++|+.|+|++|+|++ +|.... ++....+++|.
T Consensus 117 ~-l~~--~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-lp~~l~-~L~~L~Ls~N~ 171 (571)
T 3cvr_A 117 E-LPA--SLKHLDVDNNQLTM-LPE---LPALLEYINADNNQLTM-LPELPT-SLEVLSVRNNQ 171 (571)
T ss_dssp C-CCT--TCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCCCCT-TCCEEECCSSC
T ss_pred h-hhc--CCCEEECCCCcCCC-CCC---cCccccEEeCCCCccCc-CCCcCC-CcCEEECCCCC
Confidence 8 666 89999999999997 887 67889999999999987 666222 44445555553
No 320
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.39 E-value=6.2e-13 Score=133.29 Aligned_cols=117 Identities=17% Similarity=0.182 Sum_probs=104.7
Q ss_pred CcEEEEEecCCCceeeCCccccCCCCCCEEEcCCCCCCCCCChhHhhhcCCCCEEEccCccCCCCCCCCCCCCCCCceee
Q 006982 80 NRVLNLRLTDMGLKGQFPRGIRNCSSMTGLDLSSNKLYGPLPDDISKLVGFLTSLDLSSNNFSGSIPSNLANCTYLNSLK 159 (623)
Q Consensus 80 ~~v~~l~l~~~~l~g~~p~~l~~l~~L~~L~L~~N~l~g~ip~~~~~l~~~L~~L~L~~N~l~g~ip~~~~~l~~L~~l~ 159 (623)
.+++.|+|++|.+++..+..++++++|++|+|++|.+++..|..+.++. +|++|+|++|++++..+..++++++|++|+
T Consensus 52 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~-~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 130 (276)
T 2z62_A 52 PELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLS-SLQKLVAVETNLASLENFPIGHLKTLKELN 130 (276)
T ss_dssp TTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCT-TCCEEECTTSCCCCSTTCCCTTCTTCCEEE
T ss_pred cCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCc-cccEEECCCCCccccCchhcccCCCCCEEE
Confidence 5688999999999988888999999999999999999977777788865 499999999999977666899999999999
Q ss_pred ccCCcCCC-CCCccccccccccccccccccccccCCccc
Q 006982 160 LDHNRFSG-QIPPQLGQLGRLKSFSVANNLLSGSIPTFV 197 (623)
Q Consensus 160 l~~N~~~g-~iP~~l~~l~~L~~l~l~~N~l~g~ip~~~ 197 (623)
|++|++++ .+|..++++++|+.|++++|++++..|..+
T Consensus 131 l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~~~~ 169 (276)
T 2z62_A 131 VAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDL 169 (276)
T ss_dssp CCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGG
T ss_pred CcCCccceecCchhhccCCCCCEEECCCCCCCcCCHHHh
Confidence 99999987 479999999999999999999998766544
No 321
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.39 E-value=7.4e-13 Score=136.38 Aligned_cols=131 Identities=19% Similarity=0.235 Sum_probs=112.1
Q ss_pred CCCCCcccceeecCCC--------CCcEEEEEecCCCceeeCCccccCCCCCCEEEcCCCCCCCCCChhHhhhcCCCCEE
Q 006982 63 EGFICKFTGVECWHPD--------ENRVLNLRLTDMGLKGQFPRGIRNCSSMTGLDLSSNKLYGPLPDDISKLVGFLTSL 134 (623)
Q Consensus 63 ~~~~c~w~gv~c~~~~--------~~~v~~l~l~~~~l~g~~p~~l~~l~~L~~L~L~~N~l~g~ip~~~~~l~~~L~~L 134 (623)
..|.|.|+.+.|++.. ...++.|+|++|++++..+..++++++|++|+|++|.+++..|..+..+.+ |++|
T Consensus 27 ~~c~c~l~~l~~~~~~l~~lp~~~~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~-L~~L 105 (330)
T 1xku_A 27 FRCQCHLRVVQCSDLGLEKVPKDLPPDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVK-LERL 105 (330)
T ss_dssp TTCEEETTEEECTTSCCCSCCCSCCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTT-CCEE
T ss_pred CCCcCCCeEEEecCCCccccCccCCCCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCC-CCEE
Confidence 3467899999997532 246789999999999988889999999999999999999877999988754 9999
Q ss_pred EccCccCCCCCCCCCCCCCCCceeeccCCcCCCCCCccccccccccccccccccccc--cCCccc
Q 006982 135 DLSSNNFSGSIPSNLANCTYLNSLKLDHNRFSGQIPPQLGQLGRLKSFSVANNLLSG--SIPTFV 197 (623)
Q Consensus 135 ~L~~N~l~g~ip~~~~~l~~L~~l~l~~N~~~g~iP~~l~~l~~L~~l~l~~N~l~g--~ip~~~ 197 (623)
+|++|+++ .+|..+. ++|++|++++|++++..|..+.++++|+.|++++|.++. ..|..+
T Consensus 106 ~Ls~n~l~-~l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~ 167 (330)
T 1xku_A 106 YLSKNQLK-ELPEKMP--KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAF 167 (330)
T ss_dssp ECCSSCCS-BCCSSCC--TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGG
T ss_pred ECCCCcCC-ccChhhc--ccccEEECCCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhc
Confidence 99999999 7888765 799999999999997777788999999999999999963 555433
No 322
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=99.38 E-value=3.1e-13 Score=151.09 Aligned_cols=115 Identities=21% Similarity=0.153 Sum_probs=71.3
Q ss_pred cEEEEEecCCCceeeCCcc-ccCCCCCCEEEcCCCCCCCCCChhHhhhcCCCCEEEccCccCCCC---CCCCCCCCCCCc
Q 006982 81 RVLNLRLTDMGLKGQFPRG-IRNCSSMTGLDLSSNKLYGPLPDDISKLVGFLTSLDLSSNNFSGS---IPSNLANCTYLN 156 (623)
Q Consensus 81 ~v~~l~l~~~~l~g~~p~~-l~~l~~L~~L~L~~N~l~g~ip~~~~~l~~~L~~L~L~~N~l~g~---ip~~~~~l~~L~ 156 (623)
.++.|+|++|.+++..|+. +.++++|+.|+|++|.+++..|..+..+. +|++|+|++|++++. .+..+..+++|+
T Consensus 401 ~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~-~L~~L~L~~n~l~~~~~~~~~~~~~l~~L~ 479 (606)
T 3t6q_A 401 QLELLDLAFTRLKVKDAQSPFQNLHLLKVLNLSHSLLDISSEQLFDGLP-ALQHLNLQGNHFPKGNIQKTNSLQTLGRLE 479 (606)
T ss_dssp TCSEEECTTCCEECCTTCCTTTTCTTCCEEECTTCCCBTTCTTTTTTCT-TCCEEECTTCBCGGGEECSSCGGGGCTTCC
T ss_pred cCCeEECCCCcCCCcccchhhhCcccCCEEECCCCccCCcCHHHHhCCC-CCCEEECCCCCCCccccccchhhccCCCcc
Confidence 4666777777776665544 66666677777766666666666665543 366666666666652 223456666666
Q ss_pred eeeccCCcCCCCCCccccccccccccccccccccccCCcc
Q 006982 157 SLKLDHNRFSGQIPPQLGQLGRLKSFSVANNLLSGSIPTF 196 (623)
Q Consensus 157 ~l~l~~N~~~g~iP~~l~~l~~L~~l~l~~N~l~g~ip~~ 196 (623)
+|+|++|++++..|..++++++|+.|+|++|++++.+|..
T Consensus 480 ~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~ 519 (606)
T 3t6q_A 480 ILVLSFCDLSSIDQHAFTSLKMMNHVDLSHNRLTSSSIEA 519 (606)
T ss_dssp EEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCGGGGGG
T ss_pred EEECCCCccCccChhhhccccCCCEEECCCCccCcCChhH
Confidence 6666666666655666666666666666666666655543
No 323
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=99.37 E-value=5e-13 Score=148.16 Aligned_cols=133 Identities=19% Similarity=0.219 Sum_probs=77.1
Q ss_pred EEEEEecCCCceeeCC-ccccCCCCCCEEEcCCCCCCCCCChhHhhhcCCCCEEEccCccCC-CCCCCCCCCCCCCceee
Q 006982 82 VLNLRLTDMGLKGQFP-RGIRNCSSMTGLDLSSNKLYGPLPDDISKLVGFLTSLDLSSNNFS-GSIPSNLANCTYLNSLK 159 (623)
Q Consensus 82 v~~l~l~~~~l~g~~p-~~l~~l~~L~~L~L~~N~l~g~ip~~~~~l~~~L~~L~L~~N~l~-g~ip~~~~~l~~L~~l~ 159 (623)
+..|++++|.+.+..| ..+.++++|++|+|++|.+.+.+|..+..+. +|+.|+|++|.++ |.+|..+..+++|++|+
T Consensus 398 L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~-~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~ 476 (570)
T 2z63_A 398 LEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLS-SLEVLKMAGNSFQENFLPDIFTELRNLTFLD 476 (570)
T ss_dssp CCEEECTTSEEESCTTSCTTTTCTTCCEEECTTSCCEECCTTTTTTCT-TCCEEECTTCEEGGGEECSCCTTCTTCCEEE
T ss_pred CCEEEccCCccccccchhhhhcCCCCCEEeCcCCcccccchhhhhcCC-cCcEEECcCCcCccccchhhhhcccCCCEEE
Confidence 3344444455544444 2455666666666666666655555555543 3666666666665 45666666666666666
Q ss_pred ccCCcCCCCCCccccccccccccccccccccccCCcccc-c-cccccccCCCCCCCCC
Q 006982 160 LDHNRFSGQIPPQLGQLGRLKSFSVANNLLSGSIPTFVN-L-TLSADSVTNNQGLCGE 215 (623)
Q Consensus 160 l~~N~~~g~iP~~l~~l~~L~~l~l~~N~l~g~ip~~~~-~-~~~~~~~~~n~~l~~~ 215 (623)
|++|++++..|..++++++|+.|++++|++++.+|..+. + .+....+.+|+..|..
T Consensus 477 l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~ 534 (570)
T 2z63_A 477 LSQCQLEQLSPTAFNSLSSLQVLNMASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSC 534 (570)
T ss_dssp CTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCT
T ss_pred CCCCccccCChhhhhcccCCCEEeCCCCcCCCCCHHHhhcccCCcEEEecCCcccCCC
Confidence 666666666566666666666666666666665554332 1 3334455566555543
No 324
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.37 E-value=2.4e-13 Score=139.03 Aligned_cols=111 Identities=15% Similarity=0.161 Sum_probs=90.8
Q ss_pred CcEEEEEecCCCceeeCCccc--cCCCCCCEEEcCCCCCCCCCChhHhhhc----CCCCEEEccCccCCCCCCCCCCCCC
Q 006982 80 NRVLNLRLTDMGLKGQFPRGI--RNCSSMTGLDLSSNKLYGPLPDDISKLV----GFLTSLDLSSNNFSGSIPSNLANCT 153 (623)
Q Consensus 80 ~~v~~l~l~~~~l~g~~p~~l--~~l~~L~~L~L~~N~l~g~ip~~~~~l~----~~L~~L~L~~N~l~g~ip~~~~~l~ 153 (623)
.+++.|+|++|+++|.+|..+ +.+++|++|+|++|++++. |..++.+. ++|++|+|++|++++..|..+++++
T Consensus 95 ~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~ 173 (312)
T 1wwl_A 95 SGLQELTLENLEVTGTAPPPLLEATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFP 173 (312)
T ss_dssp SCCCEEEEEEEBCBSCCCCCSSSCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCS
T ss_pred CCccEEEccCCcccchhHHHHHHhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCC
Confidence 357788888888888888876 8888999999999998876 88887761 4589999999999877778888889
Q ss_pred CCceeeccCCcCCCC--CCccc--cccccccccccccccccc
Q 006982 154 YLNSLKLDHNRFSGQ--IPPQL--GQLGRLKSFSVANNLLSG 191 (623)
Q Consensus 154 ~L~~l~l~~N~~~g~--iP~~l--~~l~~L~~l~l~~N~l~g 191 (623)
+|++|+|++|+++|. +|..+ +++++|+.|+|++|++++
T Consensus 174 ~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~ 215 (312)
T 1wwl_A 174 ALSTLDLSDNPELGERGLISALCPLKFPTLQVLALRNAGMET 215 (312)
T ss_dssp SCCEEECCSCTTCHHHHHHHHSCTTSCTTCCEEECTTSCCCC
T ss_pred CCCEEECCCCCcCcchHHHHHHHhccCCCCCEEECCCCcCcc
Confidence 999999999988876 34455 788888888888888883
No 325
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.37 E-value=1.1e-12 Score=146.44 Aligned_cols=114 Identities=18% Similarity=0.174 Sum_probs=102.0
Q ss_pred cEEEEEecCCCceeeCCccccCCCCCCEEEcCCCCCCCCCChhHhhhcCCCCEEEccCccCCCCCCCCCCCCCCCceeec
Q 006982 81 RVLNLRLTDMGLKGQFPRGIRNCSSMTGLDLSSNKLYGPLPDDISKLVGFLTSLDLSSNNFSGSIPSNLANCTYLNSLKL 160 (623)
Q Consensus 81 ~v~~l~l~~~~l~g~~p~~l~~l~~L~~L~L~~N~l~g~ip~~~~~l~~~L~~L~L~~N~l~g~ip~~~~~l~~L~~l~l 160 (623)
.+..|+|++|.+++..|..|+++++|++|+|++|.+++..|..++.+. +|++|+|++|.|++..|..|+++++|++|+|
T Consensus 76 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~-~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L 154 (597)
T 3oja_B 76 QVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVP-LLTVLVLERNDLSSLPRGIFHNTPKLTTLSM 154 (597)
T ss_dssp CCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCT-TCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCC-CCCEEEeeCCCCCCCCHHHhccCCCCCEEEe
Confidence 578999999999999999999999999999999999987777778865 5999999999999544444699999999999
Q ss_pred cCCcCCCCCCccccccccccccccccccccccCCc
Q 006982 161 DHNRFSGQIPPQLGQLGRLKSFSVANNLLSGSIPT 195 (623)
Q Consensus 161 ~~N~~~g~iP~~l~~l~~L~~l~l~~N~l~g~ip~ 195 (623)
++|++++..|..++++++|+.|+|++|.+++..+.
T Consensus 155 s~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~ 189 (597)
T 3oja_B 155 SNNNLERIEDDTFQATTSLQNLQLSSNRLTHVDLS 189 (597)
T ss_dssp CSSCCCBCCTTTTTTCTTCCEEECTTSCCSBCCGG
T ss_pred eCCcCCCCChhhhhcCCcCcEEECcCCCCCCcChh
Confidence 99999998898999999999999999999986433
No 326
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.37 E-value=5e-13 Score=130.94 Aligned_cols=143 Identities=16% Similarity=0.195 Sum_probs=111.6
Q ss_pred CCCCcc-cc--eeecCC-----CCCcEEEEEecCCCceeeCCccccCCCCCCEEEcCCCC-CCCCCCh-hHhhhcCCCCE
Q 006982 64 GFICKF-TG--VECWHP-----DENRVLNLRLTDMGLKGQFPRGIRNCSSMTGLDLSSNK-LYGPLPD-DISKLVGFLTS 133 (623)
Q Consensus 64 ~~~c~w-~g--v~c~~~-----~~~~v~~l~l~~~~l~g~~p~~l~~l~~L~~L~L~~N~-l~g~ip~-~~~~l~~~L~~ 133 (623)
.|.|.+ .+ |.|.+. -...++.|+|++|++++..+..++++++|++|+|++|. ++ .+|+ .+..+. +|++
T Consensus 7 ~C~C~~~~~~~v~c~~l~~ip~~~~~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~-~i~~~~f~~l~-~L~~ 84 (239)
T 2xwt_C 7 PCECHQEEDFRVTCKDIQRIPSLPPSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQ-QLESHSFYNLS-KVTH 84 (239)
T ss_dssp SCSEEECSTTEEEECSCSSCCCCCTTCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCC-EECTTTEESCT-TCCE
T ss_pred CCeeCCCCcceeEccCccccCCCCCcccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcc-eeCHhHcCCCc-CCcE
Confidence 345654 55 448541 12478999999999999888899999999999999997 87 4554 666754 5999
Q ss_pred EEccC-ccCCCCCCCCCCCCCCCceeeccCCcCCCCCCcccccccccc---ccccccc-cccccCCcccc-c-ccc-ccc
Q 006982 134 LDLSS-NNFSGSIPSNLANCTYLNSLKLDHNRFSGQIPPQLGQLGRLK---SFSVANN-LLSGSIPTFVN-L-TLS-ADS 205 (623)
Q Consensus 134 L~L~~-N~l~g~ip~~~~~l~~L~~l~l~~N~~~g~iP~~l~~l~~L~---~l~l~~N-~l~g~ip~~~~-~-~~~-~~~ 205 (623)
|+|++ |++++..|..+.++++|++|+|++|++++ +|. ++.+++|+ .|++++| ++++..|..+. + .+. ...
T Consensus 85 L~l~~~n~l~~i~~~~f~~l~~L~~L~l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~ 162 (239)
T 2xwt_C 85 IEIRNTRNLTYIDPDALKELPLLKFLGIFNTGLKM-FPD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLK 162 (239)
T ss_dssp EEEEEETTCCEECTTSEECCTTCCEEEEEEECCCS-CCC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEE
T ss_pred EECCCCCCeeEcCHHHhCCCCCCCEEeCCCCCCcc-ccc-cccccccccccEEECCCCcchhhcCcccccchhcceeEEE
Confidence 99999 99996555678999999999999999996 887 88888888 9999999 88876665443 1 333 445
Q ss_pred cCCCC
Q 006982 206 VTNNQ 210 (623)
Q Consensus 206 ~~~n~ 210 (623)
+.+|.
T Consensus 163 l~~n~ 167 (239)
T 2xwt_C 163 LYNNG 167 (239)
T ss_dssp CCSCC
T ss_pred cCCCC
Confidence 55553
No 327
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.36 E-value=4.6e-13 Score=127.17 Aligned_cols=110 Identities=18% Similarity=0.263 Sum_probs=77.8
Q ss_pred cEEEEEecCCCceeeCCccccCCCCCCEEEcCCCCCCCCCChhHhhhcCCCCEEEccCccCCCCCCCCCCCCCCCceeec
Q 006982 81 RVLNLRLTDMGLKGQFPRGIRNCSSMTGLDLSSNKLYGPLPDDISKLVGFLTSLDLSSNNFSGSIPSNLANCTYLNSLKL 160 (623)
Q Consensus 81 ~v~~l~l~~~~l~g~~p~~l~~l~~L~~L~L~~N~l~g~ip~~~~~l~~~L~~L~L~~N~l~g~ip~~~~~l~~L~~l~l 160 (623)
+++.|++++|+++ .+| .+..+++|++|+|++|.++ .++.+..+. +|++|+|++|++++..|..++.+++|++|+|
T Consensus 45 ~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~--~~~~l~~l~-~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L 119 (197)
T 4ezg_A 45 SLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHAT--NYNPISGLS-NLERLRIMGKDVTSDKIPNLSGLTSLTLLDI 119 (197)
T ss_dssp TCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCS--CCGGGTTCT-TCCEEEEECTTCBGGGSCCCTTCTTCCEEEC
T ss_pred CccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCC--cchhhhcCC-CCCEEEeECCccCcccChhhcCCCCCCEEEe
Confidence 4667777777776 555 5777777777777777554 334566654 4777777777777767777777777777777
Q ss_pred cCCcCCCCCCccccccccccccccccccccccCCc
Q 006982 161 DHNRFSGQIPPQLGQLGRLKSFSVANNLLSGSIPT 195 (623)
Q Consensus 161 ~~N~~~g~iP~~l~~l~~L~~l~l~~N~l~g~ip~ 195 (623)
++|++++..|..++.+++|+.|++++|.+.+.+|.
T Consensus 120 s~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~~~~~ 154 (197)
T 4ezg_A 120 SHSAHDDSILTKINTLPKVNSIDLSYNGAITDIMP 154 (197)
T ss_dssp CSSBCBGGGHHHHTTCSSCCEEECCSCTBCCCCGG
T ss_pred cCCccCcHhHHHHhhCCCCCEEEccCCCCccccHh
Confidence 77777776777777777777777777774455553
No 328
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.36 E-value=8.1e-13 Score=141.80 Aligned_cols=135 Identities=20% Similarity=0.224 Sum_probs=76.8
Q ss_pred CcEEEEEecCCCceeeCCccccCCCCCCEEEcCCCCCCCCCChh-----------------------HhhhcCCCCEEEc
Q 006982 80 NRVLNLRLTDMGLKGQFPRGIRNCSSMTGLDLSSNKLYGPLPDD-----------------------ISKLVGFLTSLDL 136 (623)
Q Consensus 80 ~~v~~l~l~~~~l~g~~p~~l~~l~~L~~L~L~~N~l~g~ip~~-----------------------~~~l~~~L~~L~L 136 (623)
.++..|+|++|.+++..+..+.++++|+.|+|++|+..+.+|.. +..+. +|+.|+|
T Consensus 136 ~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~l~-~L~~L~L 214 (440)
T 3zyj_A 136 SKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLREIPNLTPLI-KLDELDL 214 (440)
T ss_dssp SSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCSSCCCCTTCS-SCCEEEC
T ss_pred ccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCccccccCCCc-ccCEEEC
Confidence 35778888888777655555555555555555553333333332 33332 3555566
Q ss_pred cCccCCCCCCCCCCCCCCCceeeccCCcCCCCCCccccccccccccccccccccccCCcccc-c-cccccccCCCCCCCC
Q 006982 137 SSNNFSGSIPSNLANCTYLNSLKLDHNRFSGQIPPQLGQLGRLKSFSVANNLLSGSIPTFVN-L-TLSADSVTNNQGLCG 214 (623)
Q Consensus 137 ~~N~l~g~ip~~~~~l~~L~~l~l~~N~~~g~iP~~l~~l~~L~~l~l~~N~l~g~ip~~~~-~-~~~~~~~~~n~~l~~ 214 (623)
++|++++..|..|.++++|+.|+|++|++++..|..+.++++|+.|+|++|+|++..+..+. + .+....+.+|++.|.
T Consensus 215 s~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~Cd 294 (440)
T 3zyj_A 215 SGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHHNPWNCN 294 (440)
T ss_dssp TTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTCCEEECTTSCCCCCCTTTTSSCTTCCEEECCSSCEECS
T ss_pred CCCccCccChhhhccCccCCEEECCCCceeEEChhhhcCCCCCCEEECCCCCCCccChhHhccccCCCEEEcCCCCccCC
Confidence 66666655555566666666666666666655555666666666666666666654444332 1 334455667776665
Q ss_pred C
Q 006982 215 E 215 (623)
Q Consensus 215 ~ 215 (623)
+
T Consensus 295 C 295 (440)
T 3zyj_A 295 C 295 (440)
T ss_dssp S
T ss_pred C
Confidence 3
No 329
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.36 E-value=1.1e-13 Score=157.53 Aligned_cols=115 Identities=23% Similarity=0.293 Sum_probs=103.7
Q ss_pred CcEEEEEecCCCceeeCCccccCCCCCCEEEcCCCCCCCCCChhHhhhcCCCCEEEccCccCCCCCCCCCCCCCCCceee
Q 006982 80 NRVLNLRLTDMGLKGQFPRGIRNCSSMTGLDLSSNKLYGPLPDDISKLVGFLTSLDLSSNNFSGSIPSNLANCTYLNSLK 159 (623)
Q Consensus 80 ~~v~~l~l~~~~l~g~~p~~l~~l~~L~~L~L~~N~l~g~ip~~~~~l~~~L~~L~L~~N~l~g~ip~~~~~l~~L~~l~ 159 (623)
..+..|+|++|.|+ .+|..|++|++|++|+|++|.|+ .||.+++.+.+ |++|+|++|.|+ .||..|++|++|++|+
T Consensus 247 ~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~-L~~L~L~~N~l~-~lp~~~~~l~~L~~L~ 322 (727)
T 4b8c_D 247 DFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT-SLPAELGSCFQ-LKYFYFFDNMVT-TLPWEFGNLCNLQFLG 322 (727)
T ss_dssp CSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS-SCCSSGGGGTT-CSEEECCSSCCC-CCCSSTTSCTTCCCEE
T ss_pred CCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC-ccChhhcCCCC-CCEEECCCCCCC-ccChhhhcCCCccEEe
Confidence 46889999999999 89999999999999999999999 89999999765 999999999998 8999999999999999
Q ss_pred ccCCcCCCCCCccccccccc-cccccccccccccCCcccc
Q 006982 160 LDHNRFSGQIPPQLGQLGRL-KSFSVANNLLSGSIPTFVN 198 (623)
Q Consensus 160 l~~N~~~g~iP~~l~~l~~L-~~l~l~~N~l~g~ip~~~~ 198 (623)
|++|+|+|.+|..++.+... ..|+|++|.++|.+|..+.
T Consensus 323 L~~N~l~~~~p~~~~~~~~~~~~l~l~~N~l~~~~p~~l~ 362 (727)
T 4b8c_D 323 VEGNPLEKQFLKILTEKSVTGLIFYLRDNRPEIPLPHERR 362 (727)
T ss_dssp CTTSCCCSHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC--
T ss_pred CCCCccCCCChHHHhhcchhhhHHhhccCcccCcCccccc
Confidence 99999999999988776443 4589999999999998654
No 330
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=99.36 E-value=6.9e-13 Score=139.92 Aligned_cols=128 Identities=16% Similarity=0.140 Sum_probs=96.5
Q ss_pred CcEEEEEecCCCceeeCCccccCCCCCCEEEcCCCCCCCCCChhHhhhcCCCCEEEccCccCCCCCCCCCCCCCCCceee
Q 006982 80 NRVLNLRLTDMGLKGQFPRGIRNCSSMTGLDLSSNKLYGPLPDDISKLVGFLTSLDLSSNNFSGSIPSNLANCTYLNSLK 159 (623)
Q Consensus 80 ~~v~~l~l~~~~l~g~~p~~l~~l~~L~~L~L~~N~l~g~ip~~~~~l~~~L~~L~L~~N~l~g~ip~~~~~l~~L~~l~ 159 (623)
..+..|+++++.++...+..+.++++|++|+|++|.+++..|..+..+. +|++|+|++|++++..|..++++++|++|+
T Consensus 45 ~~l~~l~l~~~~l~~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~-~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 123 (390)
T 3o6n_A 45 NNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAH-TIQKLYMGFNAIRYLPPHVFQNVPLLTVLV 123 (390)
T ss_dssp CCCSEEEEESCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCT-TCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCceEEEecCCchhhCChhHhcccccCcEEECCCCcccccChhhccCCC-CcCEEECCCCCCCcCCHHHhcCCCCCCEEE
Confidence 3567788888887754444578889999999999998865566777764 499999999999877777788899999999
Q ss_pred ccCCcCCCCCCcc-ccccccccccccccccccccCCcccc-c-cccccccCCC
Q 006982 160 LDHNRFSGQIPPQ-LGQLGRLKSFSVANNLLSGSIPTFVN-L-TLSADSVTNN 209 (623)
Q Consensus 160 l~~N~~~g~iP~~-l~~l~~L~~l~l~~N~l~g~ip~~~~-~-~~~~~~~~~n 209 (623)
|++|+++ .+|.. ++++++|+.|++++|.+++..|..+. + ++....+++|
T Consensus 124 L~~n~l~-~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n 175 (390)
T 3o6n_A 124 LERNDLS-SLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSN 175 (390)
T ss_dssp CCSSCCC-CCCTTTTTTCTTCCEEECCSSCCCBCCTTTTSSCTTCCEEECCSS
T ss_pred CCCCccC-cCCHHHhcCCCCCcEEECCCCccCccChhhccCCCCCCEEECCCC
Confidence 9999988 56655 58888999999999998887776443 1 3333444444
No 331
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.35 E-value=1.2e-12 Score=120.82 Aligned_cols=108 Identities=24% Similarity=0.257 Sum_probs=95.9
Q ss_pred CcEEEEEecCCCceeeCCccccCCCCCCEEEcCCCCCCCCCChhHhhhcCCCCEEEccCccCCCCCC--CCCCCCCCCce
Q 006982 80 NRVLNLRLTDMGLKGQFPRGIRNCSSMTGLDLSSNKLYGPLPDDISKLVGFLTSLDLSSNNFSGSIP--SNLANCTYLNS 157 (623)
Q Consensus 80 ~~v~~l~l~~~~l~g~~p~~l~~l~~L~~L~L~~N~l~g~ip~~~~~l~~~L~~L~L~~N~l~g~ip--~~~~~l~~L~~ 157 (623)
..+..|+|++|.+++. ..++.+++|++|+|++|.+++.+|..+..+. +|++|+|++|++++ +| ..++.+++|++
T Consensus 49 ~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~-~L~~L~Ls~N~l~~-~~~~~~l~~l~~L~~ 124 (168)
T 2ell_A 49 VNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLP-NLTHLNLSGNKLKD-ISTLEPLKKLECLKS 124 (168)
T ss_dssp GGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCT-TCCEEECBSSSCCS-SGGGGGGSSCSCCCE
T ss_pred CCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCC-CCCEEeccCCccCc-chhHHHHhcCCCCCE
Confidence 4688999999999986 7899999999999999999988888887765 59999999999995 44 78999999999
Q ss_pred eeccCCcCCCCCC---ccccccccccccccccccccc
Q 006982 158 LKLDHNRFSGQIP---PQLGQLGRLKSFSVANNLLSG 191 (623)
Q Consensus 158 l~l~~N~~~g~iP---~~l~~l~~L~~l~l~~N~l~g 191 (623)
|+|++|++++..+ ..+..+++|+.|++++|.+..
T Consensus 125 L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~~ 161 (168)
T 2ell_A 125 LDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQE 161 (168)
T ss_dssp EECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSCB
T ss_pred EEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChhh
Confidence 9999999996544 388999999999999998863
No 332
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.35 E-value=4.7e-13 Score=120.90 Aligned_cols=104 Identities=22% Similarity=0.217 Sum_probs=92.6
Q ss_pred CcEEEEEecCCCceeeCCccccCCCCCCEEEcCCCCCCCCCChhHhhhcCCCCEEEccCccCCCC-CCCCCCCCCCCcee
Q 006982 80 NRVLNLRLTDMGLKGQFPRGIRNCSSMTGLDLSSNKLYGPLPDDISKLVGFLTSLDLSSNNFSGS-IPSNLANCTYLNSL 158 (623)
Q Consensus 80 ~~v~~l~l~~~~l~g~~p~~l~~l~~L~~L~L~~N~l~g~ip~~~~~l~~~L~~L~L~~N~l~g~-ip~~~~~l~~L~~l 158 (623)
.+++.|+|++|.+++. +.++++++|++|+|++|.+++.+|..+..+.+ |++|+|++|++++. .|..++++++|++|
T Consensus 42 ~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~-L~~L~ls~N~i~~~~~~~~~~~l~~L~~L 118 (149)
T 2je0_A 42 EELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPN-LTHLNLSGNKIKDLSTIEPLKKLENLKSL 118 (149)
T ss_dssp TTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTT-CCEEECTTSCCCSHHHHGGGGGCTTCCEE
T ss_pred CCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCC-CCEEECCCCcCCChHHHHHHhhCCCCCEE
Confidence 5789999999999987 78999999999999999999888888877654 99999999999972 45889999999999
Q ss_pred eccCCcCCCCCC---cccccccccccccccc
Q 006982 159 KLDHNRFSGQIP---PQLGQLGRLKSFSVAN 186 (623)
Q Consensus 159 ~l~~N~~~g~iP---~~l~~l~~L~~l~l~~ 186 (623)
+|++|++++..+ ..++.+++|+.|++++
T Consensus 119 ~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~d 149 (149)
T 2je0_A 119 DLFNCEVTNLNDYRENVFKLLPQLTYLDGYD 149 (149)
T ss_dssp ECTTCGGGGSTTHHHHHHHHCTTCCEETTBC
T ss_pred eCcCCcccchHHHHHHHHHHCCCcccccCCC
Confidence 999999997655 4789999999999874
No 333
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.35 E-value=2e-12 Score=131.88 Aligned_cols=127 Identities=20% Similarity=0.226 Sum_probs=82.8
Q ss_pred CcEEEEEecCCCceeeCCccccCCCCCCEEEcCCCCCCCC--CChh--HhhhcCCCCEEEccCccCCCCCCCC----CCC
Q 006982 80 NRVLNLRLTDMGLKGQFPRGIRNCSSMTGLDLSSNKLYGP--LPDD--ISKLVGFLTSLDLSSNNFSGSIPSN----LAN 151 (623)
Q Consensus 80 ~~v~~l~l~~~~l~g~~p~~l~~l~~L~~L~L~~N~l~g~--ip~~--~~~l~~~L~~L~L~~N~l~g~ip~~----~~~ 151 (623)
.++..|+|++|.+++..|..++++++|++|+|++|++.|. +|.. ++.+ ++|++|+|++|+++ .+|.. +++
T Consensus 145 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l-~~L~~L~Ls~N~l~-~l~~~~~~l~~~ 222 (310)
T 4glp_A 145 PGLKVLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGERGLMAALCPHKF-PAIQNLALRNTGME-TPTGVCAALAAA 222 (310)
T ss_dssp SCCCEEEEECCSSCCCCTTSCCCCTTCCEEECCSCTTCHHHHHHTTSCTTSS-CCCCSCBCCSSCCC-CHHHHHHHHHHH
T ss_pred cCCCEEEeeCCCcchhhHHHhccCCCCCEEECCCCCCccchhhhHHHhhhcC-CCCCEEECCCCCCC-chHHHHHHHHhc
Confidence 4678888999998888888888888999999998887652 2211 2343 33667777777665 33331 355
Q ss_pred CCCCceeeccCCcCCCCCCcccccc---ccccccccccccccccCCccccccccccccCCC
Q 006982 152 CTYLNSLKLDHNRFSGQIPPQLGQL---GRLKSFSVANNLLSGSIPTFVNLTLSADSVTNN 209 (623)
Q Consensus 152 l~~L~~l~l~~N~~~g~iP~~l~~l---~~L~~l~l~~N~l~g~ip~~~~~~~~~~~~~~n 209 (623)
+++|++|+|++|++++.+|+.++.+ ++|+.|+|++|+|+ .+|..+.-++....+++|
T Consensus 223 l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~~~~~L~~L~Ls~N 282 (310)
T 4glp_A 223 GVQPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLE-QVPKGLPAKLRVLDLSSN 282 (310)
T ss_dssp TCCCSSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCC-SCCSCCCSCCSCEECCSC
T ss_pred CCCCCEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCC-chhhhhcCCCCEEECCCC
Confidence 6777777777777776666666665 46777777777776 556544323444444444
No 334
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.35 E-value=7.2e-13 Score=125.80 Aligned_cols=126 Identities=19% Similarity=0.204 Sum_probs=97.8
Q ss_pred CcEEEEEecCCCceeeCCccccCCCCCCEEEcCCCCCCCCCChhHhhhcCCCCEEEccCccCCCCCCCCCCCCCCCceee
Q 006982 80 NRVLNLRLTDMGLKGQFPRGIRNCSSMTGLDLSSNKLYGPLPDDISKLVGFLTSLDLSSNNFSGSIPSNLANCTYLNSLK 159 (623)
Q Consensus 80 ~~v~~l~l~~~~l~g~~p~~l~~l~~L~~L~L~~N~l~g~ip~~~~~l~~~L~~L~L~~N~l~g~ip~~~~~l~~L~~l~ 159 (623)
.++..|++++|.++ .++.+..+++|++|+|++|.+++..|..++.+. +|++|+|++|++++..|..++++++|++|+
T Consensus 66 ~~L~~L~l~~n~~~--~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~-~L~~L~Ls~n~i~~~~~~~l~~l~~L~~L~ 142 (197)
T 4ezg_A 66 HNIKDLTINNIHAT--NYNPISGLSNLERLRIMGKDVTSDKIPNLSGLT-SLTLLDISHSAHDDSILTKINTLPKVNSID 142 (197)
T ss_dssp TTCSEEEEESCCCS--CCGGGTTCTTCCEEEEECTTCBGGGSCCCTTCT-TCCEEECCSSBCBGGGHHHHTTCSSCCEEE
T ss_pred CCCCEEEccCCCCC--cchhhhcCCCCCEEEeECCccCcccChhhcCCC-CCCEEEecCCccCcHhHHHHhhCCCCCEEE
Confidence 36888999988554 455788899999999999999987888888865 499999999999988888889999999999
Q ss_pred ccCCcCCCCCCccccccccccccccccccccccCCccccc-cccccccCCCC
Q 006982 160 LDHNRFSGQIPPQLGQLGRLKSFSVANNLLSGSIPTFVNL-TLSADSVTNNQ 210 (623)
Q Consensus 160 l~~N~~~g~iP~~l~~l~~L~~l~l~~N~l~g~ip~~~~~-~~~~~~~~~n~ 210 (623)
|++|++.+.+| .+..+++|+.|++++|.+++ +|....+ ++....+.+|+
T Consensus 143 L~~n~~i~~~~-~l~~l~~L~~L~l~~n~i~~-~~~l~~l~~L~~L~l~~N~ 192 (197)
T 4ezg_A 143 LSYNGAITDIM-PLKTLPELKSLNIQFDGVHD-YRGIEDFPKLNQLYAFSQT 192 (197)
T ss_dssp CCSCTBCCCCG-GGGGCSSCCEEECTTBCCCC-CTTGGGCSSCCEEEECBC-
T ss_pred ccCCCCccccH-hhcCCCCCCEEECCCCCCcC-hHHhccCCCCCEEEeeCcc
Confidence 99998555777 68899999999999999887 3322222 34444555553
No 335
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.33 E-value=2.6e-12 Score=118.92 Aligned_cols=106 Identities=25% Similarity=0.249 Sum_probs=90.6
Q ss_pred CCEEEcCCCCCCCCCChhHhhhcCCCCEEEccCccCCCCCCCCCCCCCCCceeeccCCcCCCCCCccccccccccccccc
Q 006982 106 MTGLDLSSNKLYGPLPDDISKLVGFLTSLDLSSNNFSGSIPSNLANCTYLNSLKLDHNRFSGQIPPQLGQLGRLKSFSVA 185 (623)
Q Consensus 106 L~~L~L~~N~l~g~ip~~~~~l~~~L~~L~L~~N~l~g~ip~~~~~l~~L~~l~l~~N~~~g~iP~~l~~l~~L~~l~l~ 185 (623)
.+.|++++|.|+ .+|..+. +.|++|+|++|+|++..|..|+++++|++|+|++|+|++..|..+..+++|+.|+|+
T Consensus 11 ~~~l~~s~n~l~-~ip~~~~---~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~ 86 (170)
T 3g39_A 11 GTTVDCSGKSLA-SVPTGIP---TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLN 86 (170)
T ss_dssp TTEEECTTSCCS-SCCSCCC---TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CCEEEeCCCCcC-ccCccCC---CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECC
Confidence 578999999999 6998774 459999999999998888899999999999999999997666667999999999999
Q ss_pred cccccccCCcccc-c-cccccccCCCCCCCCC
Q 006982 186 NNLLSGSIPTFVN-L-TLSADSVTNNQGLCGE 215 (623)
Q Consensus 186 ~N~l~g~ip~~~~-~-~~~~~~~~~n~~l~~~ 215 (623)
+|+|++..|..+. + .+....+.+|+..|..
T Consensus 87 ~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c 118 (170)
T 3g39_A 87 DNQLKSIPRGAFDNLKSLTHIWLLNNPWDCAC 118 (170)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCBCTTB
T ss_pred CCccCEeCHHHhcCCCCCCEEEeCCCCCCCCc
Confidence 9999987776443 2 4566778889877754
No 336
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.32 E-value=4.2e-13 Score=137.18 Aligned_cols=112 Identities=16% Similarity=0.171 Sum_probs=59.8
Q ss_pred cEEEEEecCCCceeeCCccccCC-----CCCCEEEcCCCCCCCCCChhHhhhcCCCCEEEccCccCCCC--CCCCC--CC
Q 006982 81 RVLNLRLTDMGLKGQFPRGIRNC-----SSMTGLDLSSNKLYGPLPDDISKLVGFLTSLDLSSNNFSGS--IPSNL--AN 151 (623)
Q Consensus 81 ~v~~l~l~~~~l~g~~p~~l~~l-----~~L~~L~L~~N~l~g~ip~~~~~l~~~L~~L~L~~N~l~g~--ip~~~--~~ 151 (623)
+++.|+|++|.+++. |..++.+ ++|++|+|++|++++..|..++.+. +|++|+|++|+++|. +|..+ ++
T Consensus 122 ~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~-~L~~L~Ls~N~l~~~~~~~~~~~~~~ 199 (312)
T 1wwl_A 122 DLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFP-ALSTLDLSDNPELGERGLISALCPLK 199 (312)
T ss_dssp CCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCS-SCCEEECCSCTTCHHHHHHHHSCTTS
T ss_pred CccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCC-CCCEEECCCCCcCcchHHHHHHHhcc
Confidence 455666666666655 5555554 5666666666666654445555543 366666666665554 22233 55
Q ss_pred CCCCceeeccCCcCCC--CCCcc-ccccccccccccccccccccCC
Q 006982 152 CTYLNSLKLDHNRFSG--QIPPQ-LGQLGRLKSFSVANNLLSGSIP 194 (623)
Q Consensus 152 l~~L~~l~l~~N~~~g--~iP~~-l~~l~~L~~l~l~~N~l~g~ip 194 (623)
+++|++|+|++|++++ .+|.. +.++++|+.|+|++|++++.+|
T Consensus 200 l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~ 245 (312)
T 1wwl_A 200 FPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAG 245 (312)
T ss_dssp CTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCC
T ss_pred CCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccc
Confidence 5556666666665552 22221 2344555555555555555543
No 337
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.32 E-value=2.1e-12 Score=139.12 Aligned_cols=136 Identities=20% Similarity=0.202 Sum_probs=73.3
Q ss_pred CcEEEEEecCCCceeeCCccccCCCCCCEEEcCCCCCCCCCChh-Hhhhc---------------------CCCCEEEcc
Q 006982 80 NRVLNLRLTDMGLKGQFPRGIRNCSSMTGLDLSSNKLYGPLPDD-ISKLV---------------------GFLTSLDLS 137 (623)
Q Consensus 80 ~~v~~l~l~~~~l~g~~p~~l~~l~~L~~L~L~~N~l~g~ip~~-~~~l~---------------------~~L~~L~L~ 137 (623)
.++..|+|++|.+++..+..+.++++|+.|+|++|+.-+.+|.. +..+. ++|+.|+|+
T Consensus 147 ~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~l~~L~~L~Ls 226 (452)
T 3zyi_A 147 SKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKDMPNLTPLVGLEELEMS 226 (452)
T ss_dssp TTCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSSCCCCTTCTTCCEEECT
T ss_pred CCCCEEECCCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCcccccccccccccccEEECc
Confidence 46788888888888665555555555555555553333344432 22222 225555555
Q ss_pred CccCCCCCCCCCCCCCCCceeeccCCcCCCCCCccccccccccccccccccccccCCcccc-c-cccccccCCCCCCCCC
Q 006982 138 SNNFSGSIPSNLANCTYLNSLKLDHNRFSGQIPPQLGQLGRLKSFSVANNLLSGSIPTFVN-L-TLSADSVTNNQGLCGE 215 (623)
Q Consensus 138 ~N~l~g~ip~~~~~l~~L~~l~l~~N~~~g~iP~~l~~l~~L~~l~l~~N~l~g~ip~~~~-~-~~~~~~~~~n~~l~~~ 215 (623)
+|+|++..|..|.++++|+.|+|++|++++..|..+..+++|+.|+|++|+|++..+..+. + ++....+.+|+..|.+
T Consensus 227 ~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~CdC 306 (452)
T 3zyi_A 227 GNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFTPLRYLVELHLHHNPWNCDC 306 (452)
T ss_dssp TSCCSEECGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTSSTTCTTCCEEECCSSCEECST
T ss_pred CCcCcccCcccccCccCCCEEEeCCCcCceECHHHhcCCCCCCEEECCCCcCCccChHHhccccCCCEEEccCCCcCCCC
Confidence 5555544455555555555555555555555555555555555555555555544443322 1 2334455666665543
No 338
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=99.32 E-value=1.5e-12 Score=143.76 Aligned_cols=118 Identities=19% Similarity=0.183 Sum_probs=106.8
Q ss_pred CcEEEEEecCCCceeeCCccccCCCCCCEEEcCCCCCCCCCChhHhhhcCCCCEEEccCccCCC-CCCCCCCCCCCCcee
Q 006982 80 NRVLNLRLTDMGLKGQFPRGIRNCSSMTGLDLSSNKLYGPLPDDISKLVGFLTSLDLSSNNFSG-SIPSNLANCTYLNSL 158 (623)
Q Consensus 80 ~~v~~l~l~~~~l~g~~p~~l~~l~~L~~L~L~~N~l~g~ip~~~~~l~~~L~~L~L~~N~l~g-~ip~~~~~l~~L~~l 158 (623)
.+++.|+|++|.+++..|..|+++++|++|+|++|.+++..|..++.+. +|++|+|++|++++ .+|..++++++|++|
T Consensus 50 ~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~-~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L 128 (549)
T 2z81_A 50 ANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDNHLSSLSSSWFGPLS-SLKYLNLMGNPYQTLGVTSLFPNLTNLQTL 128 (549)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCSCCHHHHTTCT-TCCEEECTTCCCSSSCSSCSCTTCTTCCEE
T ss_pred CcccEEECCCCCcCccChhhccccccCCEEECCCCccCccCHHHhccCC-CCcEEECCCCcccccchhhhhhccCCccEE
Confidence 5789999999999999999999999999999999999976666688875 49999999999997 578899999999999
Q ss_pred eccCCcCCCCCC-ccccccccccccccccccccccCCcccc
Q 006982 159 KLDHNRFSGQIP-PQLGQLGRLKSFSVANNLLSGSIPTFVN 198 (623)
Q Consensus 159 ~l~~N~~~g~iP-~~l~~l~~L~~l~l~~N~l~g~ip~~~~ 198 (623)
+|++|++.+.+| ..++++++|+.|++++|++++.+|..+.
T Consensus 129 ~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~ 169 (549)
T 2z81_A 129 RIGNVETFSEIRRIDFAGLTSLNELEIKALSLRNYQSQSLK 169 (549)
T ss_dssp EEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTT
T ss_pred ECCCCccccccCHhhhhcccccCeeeccCCcccccChhhhh
Confidence 999999777887 5799999999999999999999887654
No 339
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=99.31 E-value=1.3e-12 Score=144.83 Aligned_cols=109 Identities=19% Similarity=0.185 Sum_probs=75.5
Q ss_pred CCcEEEEEecCCCceeeCCccccCCCCCCEEEcCCCCCCC--CCChhHhhhcCCCCEEEccCccCCCCCCCC-CCCCCCC
Q 006982 79 ENRVLNLRLTDMGLKGQFPRGIRNCSSMTGLDLSSNKLYG--PLPDDISKLVGFLTSLDLSSNNFSGSIPSN-LANCTYL 155 (623)
Q Consensus 79 ~~~v~~l~l~~~~l~g~~p~~l~~l~~L~~L~L~~N~l~g--~ip~~~~~l~~~L~~L~L~~N~l~g~ip~~-~~~l~~L 155 (623)
...++.|+|++|.+++.+|..++++++|+.|+|++|++++ .+|..+..+. +|++|+|++|++++.+|.. +..+++|
T Consensus 352 l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~-~L~~L~l~~N~l~~~~~~~~~~~l~~L 430 (562)
T 3a79_B 352 PSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMS-SLETLDVSLNSLNSHAYDRTCAWAESI 430 (562)
T ss_dssp CCCCCEEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCT-TCCEEECTTSCCBSCCSSCCCCCCTTC
T ss_pred CCCceEEECCCCccccchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCC-CCCEEECCCCcCCCccChhhhcCcccC
Confidence 3567888888888888888888888888888888888885 2345566654 4888888888888767754 5566666
Q ss_pred ceeeccCCcCCCCCCcccccccccccccccccccc
Q 006982 156 NSLKLDHNRFSGQIPPQLGQLGRLKSFSVANNLLS 190 (623)
Q Consensus 156 ~~l~l~~N~~~g~iP~~l~~l~~L~~l~l~~N~l~ 190 (623)
+.|+|++|+++|.+|..+. ++|+.|+|++|+++
T Consensus 431 ~~L~l~~n~l~~~~~~~l~--~~L~~L~L~~N~l~ 463 (562)
T 3a79_B 431 LVLNLSSNMLTGSVFRCLP--PKVKVLDLHNNRIM 463 (562)
T ss_dssp CEEECCSSCCCGGGGSSCC--TTCSEEECCSSCCC
T ss_pred CEEECCCCCCCcchhhhhc--CcCCEEECCCCcCc
Confidence 6666666666655554433 45555555555555
No 340
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=99.31 E-value=1.5e-12 Score=144.35 Aligned_cols=108 Identities=19% Similarity=0.227 Sum_probs=84.1
Q ss_pred cCCCCCCEEEcCCCCCCCCCChhHhhhcCCCCEEEccCccCCC--CCCCCCCCCCCCceeeccCCcCCCCCCcc-ccccc
Q 006982 101 RNCSSMTGLDLSSNKLYGPLPDDISKLVGFLTSLDLSSNNFSG--SIPSNLANCTYLNSLKLDHNRFSGQIPPQ-LGQLG 177 (623)
Q Consensus 101 ~~l~~L~~L~L~~N~l~g~ip~~~~~l~~~L~~L~L~~N~l~g--~ip~~~~~l~~L~~l~l~~N~~~g~iP~~-l~~l~ 177 (623)
+.+++|++|+|++|.+++.+|..++.+.+ |+.|+|++|++++ .+|..++++++|++|+|++|++++.+|.. +..++
T Consensus 350 ~~l~~L~~L~l~~n~l~~~~~~~~~~l~~-L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~ 428 (562)
T 3a79_B 350 PSPSSFTFLNFTQNVFTDSVFQGCSTLKR-LQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAE 428 (562)
T ss_dssp SSCCCCCEEECCSSCCCTTTTTTCCSCSS-CCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCT
T ss_pred cCCCCceEEECCCCccccchhhhhcccCC-CCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCCccChhhhcCcc
Confidence 67788888999999888888888887654 8999999998886 34567888888999999999988877764 67788
Q ss_pred cccccccccccccccCCccccccccccccCCC
Q 006982 178 RLKSFSVANNLLSGSIPTFVNLTLSADSVTNN 209 (623)
Q Consensus 178 ~L~~l~l~~N~l~g~ip~~~~~~~~~~~~~~n 209 (623)
+|+.|++++|+++|.+|..+.-.+....+++|
T Consensus 429 ~L~~L~l~~n~l~~~~~~~l~~~L~~L~L~~N 460 (562)
T 3a79_B 429 SILVLNLSSNMLTGSVFRCLPPKVKVLDLHNN 460 (562)
T ss_dssp TCCEEECCSSCCCGGGGSSCCTTCSEEECCSS
T ss_pred cCCEEECCCCCCCcchhhhhcCcCCEEECCCC
Confidence 88899999998888887655323444445555
No 341
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=99.31 E-value=7.7e-13 Score=145.07 Aligned_cols=108 Identities=21% Similarity=0.236 Sum_probs=95.1
Q ss_pred CcEEEEEecCCCceeeCCccccCCCCCCEEEcCCCCCCCCCChhHhhhcCCCCEEEccCccCCCCCCCCCCCCCCCceee
Q 006982 80 NRVLNLRLTDMGLKGQFPRGIRNCSSMTGLDLSSNKLYGPLPDDISKLVGFLTSLDLSSNNFSGSIPSNLANCTYLNSLK 159 (623)
Q Consensus 80 ~~v~~l~l~~~~l~g~~p~~l~~l~~L~~L~L~~N~l~g~ip~~~~~l~~~L~~L~L~~N~l~g~ip~~~~~l~~L~~l~ 159 (623)
.+++.|+|++|.+++..|..|.++++|++|+|++|++++..|..++++.+ |++|||++|+++ .||.. .+++|++|+
T Consensus 21 ~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~-L~~L~Ls~N~l~-~lp~~--~l~~L~~L~ 96 (520)
T 2z7x_B 21 QKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQE-LEYLDLSHNKLV-KISCH--PTVNLKHLD 96 (520)
T ss_dssp TTCSEEECCSSCCCCCCHHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTT-CCEEECCSSCCC-EEECC--CCCCCSEEE
T ss_pred ccccEEECCCCcccccChhhccccccccEEecCCCccCCcChHHhhcccC-CCEEecCCCcee-ecCcc--ccCCccEEe
Confidence 57888999999999888888999999999999999999777888888654 999999999999 68877 889999999
Q ss_pred ccCCcCCC-CCCccccccccccccccccccccc
Q 006982 160 LDHNRFSG-QIPPQLGQLGRLKSFSVANNLLSG 191 (623)
Q Consensus 160 l~~N~~~g-~iP~~l~~l~~L~~l~l~~N~l~g 191 (623)
|++|++++ .+|..++++++|+.|++++|.+++
T Consensus 97 L~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~ 129 (520)
T 2z7x_B 97 LSFNAFDALPICKEFGNMSQLKFLGLSTTHLEK 129 (520)
T ss_dssp CCSSCCSSCCCCGGGGGCTTCCEEEEEESSCCG
T ss_pred ccCCccccccchhhhccCCcceEEEecCcccch
Confidence 99999987 688899999999999999999876
No 342
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=99.31 E-value=1.6e-12 Score=143.99 Aligned_cols=116 Identities=22% Similarity=0.276 Sum_probs=108.8
Q ss_pred CcEEEEEecCCCceeeCCccccCCCCCCEEEcCCCCCC-CCCChhHhhhcCCCCEEEccCccCCCCCCCCCCCCCCCcee
Q 006982 80 NRVLNLRLTDMGLKGQFPRGIRNCSSMTGLDLSSNKLY-GPLPDDISKLVGFLTSLDLSSNNFSGSIPSNLANCTYLNSL 158 (623)
Q Consensus 80 ~~v~~l~l~~~~l~g~~p~~l~~l~~L~~L~L~~N~l~-g~ip~~~~~l~~~L~~L~L~~N~l~g~ip~~~~~l~~L~~l 158 (623)
.+++.|+|++|.+.+.+|..+.++++|+.|+|++|.+. +.+|..+..+.+ |+.|+|++|++++..|..++++++|++|
T Consensus 421 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~-L~~L~l~~n~l~~~~~~~~~~l~~L~~L 499 (570)
T 2z63_A 421 RNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRN-LTFLDLSQCQLEQLSPTAFNSLSSLQVL 499 (570)
T ss_dssp TTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTT-CCEEECTTSCCCEECTTTTTTCTTCCEE
T ss_pred CCCCEEeCcCCcccccchhhhhcCCcCcEEECcCCcCccccchhhhhcccC-CCEEECCCCccccCChhhhhcccCCCEE
Confidence 46889999999999999999999999999999999998 689998988754 9999999999999889999999999999
Q ss_pred eccCCcCCCCCCccccccccccccccccccccccCCcc
Q 006982 159 KLDHNRFSGQIPPQLGQLGRLKSFSVANNLLSGSIPTF 196 (623)
Q Consensus 159 ~l~~N~~~g~iP~~l~~l~~L~~l~l~~N~l~g~ip~~ 196 (623)
+|++|++++..|..+.++++|+.|++++|.++|.+|..
T Consensus 500 ~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~~ 537 (570)
T 2z63_A 500 NMASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPRI 537 (570)
T ss_dssp ECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTTTT
T ss_pred eCCCCcCCCCCHHHhhcccCCcEEEecCCcccCCCcch
Confidence 99999999988888999999999999999999999863
No 343
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=99.30 E-value=5.6e-12 Score=132.92 Aligned_cols=111 Identities=20% Similarity=0.255 Sum_probs=100.8
Q ss_pred CcEEEEEecCCCceeeCCccccCCCCCCEEEcCCCCCCCCCChhHhhhcCCCCEEEccCccCCCCCCCC-CCCCCCCcee
Q 006982 80 NRVLNLRLTDMGLKGQFPRGIRNCSSMTGLDLSSNKLYGPLPDDISKLVGFLTSLDLSSNNFSGSIPSN-LANCTYLNSL 158 (623)
Q Consensus 80 ~~v~~l~l~~~~l~g~~p~~l~~l~~L~~L~L~~N~l~g~ip~~~~~l~~~L~~L~L~~N~l~g~ip~~-~~~l~~L~~l 158 (623)
.+++.|+|++|.+++..|..++++++|++|+|++|.+++..|..++.+. +|++|+|++|+++ .+|.. ++++++|++|
T Consensus 69 ~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~-~L~~L~L~~n~l~-~l~~~~~~~l~~L~~L 146 (390)
T 3o6n_A 69 RQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVP-LLTVLVLERNDLS-SLPRGIFHNTPKLTTL 146 (390)
T ss_dssp CCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCT-TCCEEECCSSCCC-CCCTTTTTTCTTCCEE
T ss_pred ccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCC-CCCEEECCCCccC-cCCHHHhcCCCCCcEE
Confidence 3578999999999998888999999999999999999987777788865 4999999999999 66765 6899999999
Q ss_pred eccCCcCCCCCCcccccccccccccccccccccc
Q 006982 159 KLDHNRFSGQIPPQLGQLGRLKSFSVANNLLSGS 192 (623)
Q Consensus 159 ~l~~N~~~g~iP~~l~~l~~L~~l~l~~N~l~g~ 192 (623)
+|++|++++..|..++.+++|+.|++++|++++.
T Consensus 147 ~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~ 180 (390)
T 3o6n_A 147 SMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHV 180 (390)
T ss_dssp ECCSSCCCBCCTTTTSSCTTCCEEECCSSCCSBC
T ss_pred ECCCCccCccChhhccCCCCCCEEECCCCcCCcc
Confidence 9999999988888899999999999999999875
No 344
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=99.30 E-value=2.5e-12 Score=149.41 Aligned_cols=117 Identities=25% Similarity=0.280 Sum_probs=85.4
Q ss_pred CcEEEEEecCCCceeeC-CccccCCCCCCEEEcCCCCCCCCCChhHhhhcCCCCEEEccCccCCCCCCCC--CCCCCCCc
Q 006982 80 NRVLNLRLTDMGLKGQF-PRGIRNCSSMTGLDLSSNKLYGPLPDDISKLVGFLTSLDLSSNNFSGSIPSN--LANCTYLN 156 (623)
Q Consensus 80 ~~v~~l~l~~~~l~g~~-p~~l~~l~~L~~L~L~~N~l~g~ip~~~~~l~~~L~~L~L~~N~l~g~ip~~--~~~l~~L~ 156 (623)
..++.|+|++|++.+.+ |..|++|++|++|+|++|.+++..|..+.++.+ |++|+|++|++++.+|.. ++++++|+
T Consensus 48 ~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~-L~~L~Ls~n~l~~~~~~~~~~~~L~~L~ 126 (844)
T 3j0a_A 48 EQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPDAFQGLFH-LFELRLYFCGLSDAVLKDGYFRNLKALT 126 (844)
T ss_dssp CSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECTTSSCSCSS-CCCEECTTCCCSSCCSTTCCCSSCSSCC
T ss_pred ccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCHhHccCCcc-cCEeeCcCCCCCcccccCccccccCCCC
Confidence 45677777777666666 556777778888888888777766777777544 778888888777766655 77777788
Q ss_pred eeeccCCcCCCCCC-ccccccccccccccccccccccCCccc
Q 006982 157 SLKLDHNRFSGQIP-PQLGQLGRLKSFSVANNLLSGSIPTFV 197 (623)
Q Consensus 157 ~l~l~~N~~~g~iP-~~l~~l~~L~~l~l~~N~l~g~ip~~~ 197 (623)
+|+|++|++++..| ..++++++|+.|+|++|.+++..|..+
T Consensus 127 ~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~~~~~l 168 (844)
T 3j0a_A 127 RLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHEL 168 (844)
T ss_dssp EEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCCCSGGG
T ss_pred EEECCCCcccccccchhHhhCCCCCEEECCCCcCCeeCHHHc
Confidence 88888777776554 467777777777777777777766543
No 345
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=99.30 E-value=1.3e-12 Score=143.23 Aligned_cols=114 Identities=22% Similarity=0.234 Sum_probs=90.1
Q ss_pred CCcEEEEEecCCCceeeCCccccCCCCCCEEEcCCCCCCC--CCChhHhhhcCCCCEEEccCccCCCCCCCC-CCCCCCC
Q 006982 79 ENRVLNLRLTDMGLKGQFPRGIRNCSSMTGLDLSSNKLYG--PLPDDISKLVGFLTSLDLSSNNFSGSIPSN-LANCTYL 155 (623)
Q Consensus 79 ~~~v~~l~l~~~~l~g~~p~~l~~l~~L~~L~L~~N~l~g--~ip~~~~~l~~~L~~L~L~~N~l~g~ip~~-~~~l~~L 155 (623)
...++.|+|++|.+++.+|..++++++|+.|+|++|++++ .+|..+..+.+ |++|+|++|++++.+|.. +..+++|
T Consensus 323 l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~-L~~L~Ls~N~l~~~l~~~~~~~l~~L 401 (520)
T 2z7x_B 323 ISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKS-LQQLDISQNSVSYDEKKGDCSWTKSL 401 (520)
T ss_dssp CCCCCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTT-CCEEECCSSCCBCCGGGCSCCCCTTC
T ss_pred CCcccEEEeECCccChhhhhhhccCCCCCEEEccCCccCccccchHHHhhCCC-CCEEECCCCcCCcccccchhccCccC
Confidence 3568899999999999999999999999999999999996 66777888654 999999999999878765 6777777
Q ss_pred ceeeccCCcCCCCCCccccccccccccccccccccccCCcc
Q 006982 156 NSLKLDHNRFSGQIPPQLGQLGRLKSFSVANNLLSGSIPTF 196 (623)
Q Consensus 156 ~~l~l~~N~~~g~iP~~l~~l~~L~~l~l~~N~l~g~ip~~ 196 (623)
+.|+|++|++++.+|..+. ++|+.|+|++|+++ .+|..
T Consensus 402 ~~L~Ls~N~l~~~~~~~l~--~~L~~L~Ls~N~l~-~ip~~ 439 (520)
T 2z7x_B 402 LSLNMSSNILTDTIFRCLP--PRIKVLDLHSNKIK-SIPKQ 439 (520)
T ss_dssp CEEECCSSCCCGGGGGSCC--TTCCEEECCSSCCC-CCCGG
T ss_pred CEEECcCCCCCcchhhhhc--ccCCEEECCCCccc-ccchh
Confidence 7777777777776666554 56777777777776 56653
No 346
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.29 E-value=5.4e-12 Score=117.23 Aligned_cols=110 Identities=24% Similarity=0.261 Sum_probs=88.8
Q ss_pred CCCCcccceeecCCC--------CCcEEEEEecCCCceeeCCccccCCCCCCEEEcCCCCCCCCCChh-HhhhcCCCCEE
Q 006982 64 GFICKFTGVECWHPD--------ENRVLNLRLTDMGLKGQFPRGIRNCSSMTGLDLSSNKLYGPLPDD-ISKLVGFLTSL 134 (623)
Q Consensus 64 ~~~c~w~gv~c~~~~--------~~~v~~l~l~~~~l~g~~p~~l~~l~~L~~L~L~~N~l~g~ip~~-~~~l~~~L~~L 134 (623)
.|.|...-+.|++.. ...+..|+|++|.+++..|..|+++++|+.|+|++|+|++ +|.. +..+. +|++|
T Consensus 9 ~C~C~~~~l~~~~n~l~~iP~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-i~~~~~~~l~-~L~~L 86 (174)
T 2r9u_A 9 QCSCDQTLVNCQNIRLASVPAGIPTDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTA-IPTGVFDKLT-QLTQL 86 (174)
T ss_dssp TSEECSSEEECCSSCCSSCCSCCCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCC-CCTTTTTTCT-TCCEE
T ss_pred CCEECCcEEEeCCCCCCccCCCcCCCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCc-cChhHhCCcc-hhhEE
Confidence 355666678886532 2467899999999999999999999999999999999995 6665 46654 59999
Q ss_pred EccCccCCCCCCCCCCCCCCCceeeccCCcCCCCCCcccccc
Q 006982 135 DLSSNNFSGSIPSNLANCTYLNSLKLDHNRFSGQIPPQLGQL 176 (623)
Q Consensus 135 ~L~~N~l~g~ip~~~~~l~~L~~l~l~~N~~~g~iP~~l~~l 176 (623)
+|++|+|++..|..+.++++|++|+|++|.|.. .|..+..+
T Consensus 87 ~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~~~c-~~~~~~~l 127 (174)
T 2r9u_A 87 DLNDNHLKSIPRGAFDNLKSLTHIYLYNNPWDC-ECRDIMYL 127 (174)
T ss_dssp ECCSSCCCCCCTTTTTTCTTCSEEECCSSCBCT-TBGGGHHH
T ss_pred ECCCCccceeCHHHhccccCCCEEEeCCCCccc-ccccHHHH
Confidence 999999996544559999999999999999995 45444443
No 347
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.28 E-value=9.9e-13 Score=142.91 Aligned_cols=31 Identities=10% Similarity=-0.026 Sum_probs=25.7
Q ss_pred cHHHHHHHHHHhCCCCCCCCcceeEEEEeCC
Q 006982 343 SEKEFVAEMATLGSVKNRNLVPLLGFCMAKK 373 (623)
Q Consensus 343 ~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~ 373 (623)
+.++|..|++.+++++|+|+|+++|||....
T Consensus 322 g~~eF~~Eve~L~~i~HrNLV~L~gyC~s~~ 352 (487)
T 3oja_A 322 GSETERLECERENQARQREIDALKEQYRTVI 352 (487)
T ss_dssp ---CHHHHHHHHHHHHHHHHHHHHHHTCCCC
T ss_pred cHHHHHHHHHHHhcccccchhhHHHHhcChH
Confidence 4678999999999999999999999997653
No 348
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.28 E-value=3.3e-12 Score=130.83 Aligned_cols=129 Identities=19% Similarity=0.130 Sum_probs=93.2
Q ss_pred cEEEEEecCCCceeeCCccccCCCCCCEEEcCCCCCCCCCChhHhhhcCCCCEEEccCccCCCCCCCCCCCCCCCceeec
Q 006982 81 RVLNLRLTDMGLKGQFPRGIRNCSSMTGLDLSSNKLYGPLPDDISKLVGFLTSLDLSSNNFSGSIPSNLANCTYLNSLKL 160 (623)
Q Consensus 81 ~v~~l~l~~~~l~g~~p~~l~~l~~L~~L~L~~N~l~g~ip~~~~~l~~~L~~L~L~~N~l~g~ip~~~~~l~~L~~l~l 160 (623)
.+..|+|++|.+++..|..++.+++|+.|+|++|.+++..|..+....++|++|+|++|++++ +|. ...+++|++|+|
T Consensus 121 ~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~-~~~-~~~l~~L~~L~L 198 (317)
T 3o53_A 121 GKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYD-VKG-QVVFAKLKTLDL 198 (317)
T ss_dssp SCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCE-EEC-CCCCTTCCEEEC
T ss_pred CCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCcccHHHHhhccCcCCEEECCCCcCcc-ccc-ccccccCCEEEC
Confidence 467778888888777777788888888888888888876666665323458888888888884 343 345888888888
Q ss_pred cCCcCCCCCCccccccccccccccccccccccCCcccc-c-cccccccCCCCCCC
Q 006982 161 DHNRFSGQIPPQLGQLGRLKSFSVANNLLSGSIPTFVN-L-TLSADSVTNNQGLC 213 (623)
Q Consensus 161 ~~N~~~g~iP~~l~~l~~L~~l~l~~N~l~g~ip~~~~-~-~~~~~~~~~n~~l~ 213 (623)
++|++++ +|+.+..+++|+.|+|++|++++ +|..+. + ++....+.+|+..|
T Consensus 199 s~N~l~~-l~~~~~~l~~L~~L~L~~N~l~~-l~~~~~~l~~L~~L~l~~N~~~~ 251 (317)
T 3o53_A 199 SSNKLAF-MGPEFQSAAGVTWISLRNNKLVL-IEKALRFSQNLEHFDLRGNGFHC 251 (317)
T ss_dssp CSSCCCE-ECGGGGGGTTCSEEECTTSCCCE-ECTTCCCCTTCCEEECTTCCCBH
T ss_pred CCCcCCc-chhhhcccCcccEEECcCCcccc-hhhHhhcCCCCCEEEccCCCccC
Confidence 8888884 66668888888888888888884 555432 1 34455666676554
No 349
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.27 E-value=3.8e-12 Score=132.34 Aligned_cols=116 Identities=22% Similarity=0.249 Sum_probs=102.5
Q ss_pred CcEEEEEecCCCceeeCCccccCCCCCCEEEcCCCCCCCCCChh-HhhhcCCCCEEEccCccCCCCCCC--CCCCCCCCc
Q 006982 80 NRVLNLRLTDMGLKGQFPRGIRNCSSMTGLDLSSNKLYGPLPDD-ISKLVGFLTSLDLSSNNFSGSIPS--NLANCTYLN 156 (623)
Q Consensus 80 ~~v~~l~l~~~~l~g~~p~~l~~l~~L~~L~L~~N~l~g~ip~~-~~~l~~~L~~L~L~~N~l~g~ip~--~~~~l~~L~ 156 (623)
.+++.|+|++|++++..|..++++++|++|+|++|.++ .+|.. +..+. +|++|+|++|+++ .+|. .+.++++|+
T Consensus 76 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~-~~~~~~~~~l~-~L~~L~L~~n~l~-~l~~~~~~~~l~~L~ 152 (353)
T 2z80_A 76 VNLQALVLTSNGINTIEEDSFSSLGSLEHLDLSYNYLS-NLSSSWFKPLS-SLTFLNLLGNPYK-TLGETSLFSHLTKLQ 152 (353)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCS-SCCHHHHTTCT-TCSEEECTTCCCS-SSCSSCSCTTCTTCC
T ss_pred CCCCEEECCCCccCccCHhhcCCCCCCCEEECCCCcCC-cCCHhHhCCCc-cCCEEECCCCCCc-ccCchhhhccCCCCc
Confidence 57899999999999999999999999999999999999 56666 66754 5999999999999 5776 789999999
Q ss_pred eeeccCCc-CCCCCCccccccccccccccccccccccCCcccc
Q 006982 157 SLKLDHNR-FSGQIPPQLGQLGRLKSFSVANNLLSGSIPTFVN 198 (623)
Q Consensus 157 ~l~l~~N~-~~g~iP~~l~~l~~L~~l~l~~N~l~g~ip~~~~ 198 (623)
+|+|++|+ +++..|..++++++|+.|++++|.+++.+|..+.
T Consensus 153 ~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~ 195 (353)
T 2z80_A 153 ILRVGNMDTFTKIQRKDFAGLTFLEELEIDASDLQSYEPKSLK 195 (353)
T ss_dssp EEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTT
T ss_pred EEECCCCccccccCHHHccCCCCCCEEECCCCCcCccCHHHHh
Confidence 99999995 6655577899999999999999999998887654
No 350
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=99.27 E-value=3.4e-12 Score=138.33 Aligned_cols=114 Identities=21% Similarity=0.223 Sum_probs=102.1
Q ss_pred CcEEEEEecCCCceeeCCccccCCCCCCEEEcCCCCCCCCCChh-HhhhcCCCCEEEccCccCCCCCCCCCCCCCCCcee
Q 006982 80 NRVLNLRLTDMGLKGQFPRGIRNCSSMTGLDLSSNKLYGPLPDD-ISKLVGFLTSLDLSSNNFSGSIPSNLANCTYLNSL 158 (623)
Q Consensus 80 ~~v~~l~l~~~~l~g~~p~~l~~l~~L~~L~L~~N~l~g~ip~~-~~~l~~~L~~L~L~~N~l~g~ip~~~~~l~~L~~l 158 (623)
.+++.|+|++|.+++..|..|+++++|++|+|++|.++ .+|.. +.++ ++|++|+|++|++++..|..+.++++|++|
T Consensus 56 ~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~~l-~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L 133 (477)
T 2id5_A 56 PHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLK-LIPLGVFTGL-SNLTKLDISENKIVILLDYMFQDLYNLKSL 133 (477)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCC-SCCTTSSTTC-TTCCEEECTTSCCCEECTTTTTTCTTCCEE
T ss_pred CCCCEEECCCCccCEeChhhhhCCccCCEEECCCCcCC-ccCcccccCC-CCCCEEECCCCccccCChhHccccccCCEE
Confidence 57899999999999999999999999999999999999 45554 5665 459999999999998888899999999999
Q ss_pred eccCCcCCCCCCccccccccccccccccccccccCCc
Q 006982 159 KLDHNRFSGQIPPQLGQLGRLKSFSVANNLLSGSIPT 195 (623)
Q Consensus 159 ~l~~N~~~g~iP~~l~~l~~L~~l~l~~N~l~g~ip~ 195 (623)
+|++|++++..|..+.++++|+.|+|++|++++..+.
T Consensus 134 ~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~ 170 (477)
T 2id5_A 134 EVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTE 170 (477)
T ss_dssp EECCTTCCEECTTSSTTCTTCCEEEEESCCCSSCCHH
T ss_pred ECCCCccceeChhhccCCCCCCEEECCCCcCcccChh
Confidence 9999999988888999999999999999999876554
No 351
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=99.26 E-value=4e-12 Score=144.11 Aligned_cols=128 Identities=21% Similarity=0.198 Sum_probs=108.7
Q ss_pred CcEEEEEecCCCceeeCCccccCCCCCCEEEcCCCCCCCCCCh-hHhhhcCCCCEEEccCccCCCCCCCCCCCCCCCcee
Q 006982 80 NRVLNLRLTDMGLKGQFPRGIRNCSSMTGLDLSSNKLYGPLPD-DISKLVGFLTSLDLSSNNFSGSIPSNLANCTYLNSL 158 (623)
Q Consensus 80 ~~v~~l~l~~~~l~g~~p~~l~~l~~L~~L~L~~N~l~g~ip~-~~~~l~~~L~~L~L~~N~l~g~ip~~~~~l~~L~~l 158 (623)
.+++.|+|++|.+++..|..++++++|++|+|++|.++ .+|+ .++++. +|++|+|++|++++..|..++++++|++|
T Consensus 49 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~~~l~-~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 126 (680)
T 1ziw_A 49 SQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELS-QLSDKTFAFCT-NLTELHLMSNSIQKIKNNPFVKQKNLITL 126 (680)
T ss_dssp TTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSSCCC-CCCTTTTTTCT-TCSEEECCSSCCCCCCSCTTTTCTTCCEE
T ss_pred CcCcEEECCCCccCccCHHHHhcccCcCEEECCCCccC-ccChhhhccCC-CCCEEECCCCccCccChhHccccCCCCEE
Confidence 46889999999999999999999999999999999999 4665 577765 49999999999997667789999999999
Q ss_pred eccCCcCCCCCCccccccccccccccccccccccCCcccc----ccccccccCCC
Q 006982 159 KLDHNRFSGQIPPQLGQLGRLKSFSVANNLLSGSIPTFVN----LTLSADSVTNN 209 (623)
Q Consensus 159 ~l~~N~~~g~iP~~l~~l~~L~~l~l~~N~l~g~ip~~~~----~~~~~~~~~~n 209 (623)
+|++|++++..|..++++++|+.|++++|.+++..|..+. ..+....+.+|
T Consensus 127 ~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~L~~n 181 (680)
T 1ziw_A 127 DLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSEELDIFANSSLKKLELSSN 181 (680)
T ss_dssp ECCSSCCSCCCCCSSSCCTTCCEEECCSSCCCCBCHHHHGGGTTCEESEEECTTC
T ss_pred ECCCCcccccCchhhcccccCCEEEccCCcccccCHHHhhccccccccEEECCCC
Confidence 9999999999999999999999999999999988775432 13444455555
No 352
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.25 E-value=1.4e-11 Score=126.80 Aligned_cols=125 Identities=18% Similarity=0.305 Sum_probs=105.4
Q ss_pred CcEEEEEecCCCceeeCCccccCCCCCCEEEcCCCCCCCCCChhHhhhcCCCCEEEccCccCCCCCCCCCCCCCCCceee
Q 006982 80 NRVLNLRLTDMGLKGQFPRGIRNCSSMTGLDLSSNKLYGPLPDDISKLVGFLTSLDLSSNNFSGSIPSNLANCTYLNSLK 159 (623)
Q Consensus 80 ~~v~~l~l~~~~l~g~~p~~l~~l~~L~~L~L~~N~l~g~ip~~~~~l~~~L~~L~L~~N~l~g~ip~~~~~l~~L~~l~ 159 (623)
.+++.|+|++|.+++..|..++++++|++|+|++|.++ .+|..+. ++|++|+|++|++++..+..++++++|++|+
T Consensus 78 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~---~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~ 153 (332)
T 2ft3_A 78 QHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKNHLV-EIPPNLP---SSLVELRIHDNRIRKVPKGVFSGLRNMNCIE 153 (332)
T ss_dssp TTCCEEECCSSCCCEECGGGSTTCTTCCEEECCSSCCC-SCCSSCC---TTCCEEECCSSCCCCCCSGGGSSCSSCCEEE
T ss_pred CCCcEEECCCCccCccCHhHhhCcCCCCEEECCCCcCC-ccCcccc---ccCCEEECCCCccCccCHhHhCCCccCCEEE
Confidence 56899999999999999999999999999999999999 8998876 4599999999999965555689999999999
Q ss_pred ccCCcCC--CCCCccccccccccccccccccccccCCccccccccccccCCCC
Q 006982 160 LDHNRFS--GQIPPQLGQLGRLKSFSVANNLLSGSIPTFVNLTLSADSVTNNQ 210 (623)
Q Consensus 160 l~~N~~~--g~iP~~l~~l~~L~~l~l~~N~l~g~ip~~~~~~~~~~~~~~n~ 210 (623)
|++|+++ |..|..+..+ +|+.|++++|++++ +|..+.-.+....+++|.
T Consensus 154 l~~n~l~~~~~~~~~~~~l-~L~~L~l~~n~l~~-l~~~~~~~L~~L~l~~n~ 204 (332)
T 2ft3_A 154 MGGNPLENSGFEPGAFDGL-KLNYLRISEAKLTG-IPKDLPETLNELHLDHNK 204 (332)
T ss_dssp CCSCCCBGGGSCTTSSCSC-CCSCCBCCSSBCSS-CCSSSCSSCSCCBCCSSC
T ss_pred CCCCccccCCCCcccccCC-ccCEEECcCCCCCc-cCccccCCCCEEECCCCc
Confidence 9999996 5778888888 99999999999987 665443344455555553
No 353
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.24 E-value=4.6e-12 Score=117.91 Aligned_cols=103 Identities=21% Similarity=0.275 Sum_probs=60.2
Q ss_pred cEEEEEecCCCceeeCCccccCCC-CCCEEEcCCCCCCCCCChhHhhhcCCCCEEEccCccCCCCCCCCC-CCCCCCcee
Q 006982 81 RVLNLRLTDMGLKGQFPRGIRNCS-SMTGLDLSSNKLYGPLPDDISKLVGFLTSLDLSSNNFSGSIPSNL-ANCTYLNSL 158 (623)
Q Consensus 81 ~v~~l~l~~~~l~g~~p~~l~~l~-~L~~L~L~~N~l~g~ip~~~~~l~~~L~~L~L~~N~l~g~ip~~~-~~l~~L~~l 158 (623)
.++.|+|++|+++. +|. +..+. +|++|+|++|.+++ + ..+..+. +|++|+|++|++++ +|+.+ +.+++|++|
T Consensus 20 ~L~~L~l~~n~l~~-i~~-~~~~~~~L~~L~Ls~N~l~~-~-~~l~~l~-~L~~L~Ls~N~l~~-~~~~~~~~l~~L~~L 93 (176)
T 1a9n_A 20 RDRELDLRGYKIPV-IEN-LGATLDQFDAIDFSDNEIRK-L-DGFPLLR-RLKTLLVNNNRICR-IGEGLDQALPDLTEL 93 (176)
T ss_dssp SCEEEECTTSCCCS-CCC-GGGGTTCCSEEECCSSCCCE-E-CCCCCCS-SCCEEECCSSCCCE-ECSCHHHHCTTCCEE
T ss_pred CceEEEeeCCCCch-hHH-hhhcCCCCCEEECCCCCCCc-c-cccccCC-CCCEEECCCCcccc-cCcchhhcCCCCCEE
Confidence 45666666666663 333 44433 66666666666664 2 3455543 36666666666663 44333 666666666
Q ss_pred eccCCcCCCCCCc--ccccccccccccccccccc
Q 006982 159 KLDHNRFSGQIPP--QLGQLGRLKSFSVANNLLS 190 (623)
Q Consensus 159 ~l~~N~~~g~iP~--~l~~l~~L~~l~l~~N~l~ 190 (623)
+|++|+++ .+|. .+..+++|+.|++++|.++
T Consensus 94 ~L~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~ 126 (176)
T 1a9n_A 94 ILTNNSLV-ELGDLDPLASLKSLTYLCILRNPVT 126 (176)
T ss_dssp ECCSCCCC-CGGGGGGGGGCTTCCEEECCSSGGG
T ss_pred ECCCCcCC-cchhhHhhhcCCCCCEEEecCCCCC
Confidence 66666664 4555 5666666666666666665
No 354
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.24 E-value=1.2e-11 Score=127.15 Aligned_cols=126 Identities=20% Similarity=0.269 Sum_probs=94.9
Q ss_pred CcEEEEEecCCCce--eeCCccccCCCCCCEEEcCCCCCCCCCChhHhhhcCCCCEEEccCccCCCCCCCCCCCCCCCce
Q 006982 80 NRVLNLRLTDMGLK--GQFPRGIRNCSSMTGLDLSSNKLYGPLPDDISKLVGFLTSLDLSSNNFSGSIPSNLANCTYLNS 157 (623)
Q Consensus 80 ~~v~~l~l~~~~l~--g~~p~~l~~l~~L~~L~L~~N~l~g~ip~~~~~l~~~L~~L~L~~N~l~g~ip~~~~~l~~L~~ 157 (623)
..+..|+|++|.+. |..+..+.++++|+.|+|++|.++ .+|..+. ++|+.|+|++|++++..|..+.++++|+.
T Consensus 145 ~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~-~l~~~~~---~~L~~L~l~~n~l~~~~~~~~~~l~~L~~ 220 (330)
T 1xku_A 145 NQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNIT-TIPQGLP---PSLTELHLDGNKITKVDAASLKGLNNLAK 220 (330)
T ss_dssp TTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCC-SCCSSCC---TTCSEEECTTSCCCEECTGGGTTCTTCCE
T ss_pred ccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCccc-cCCcccc---ccCCEEECCCCcCCccCHHHhcCCCCCCE
Confidence 46788899998885 477778888888888888888888 5777654 34888888888888777778888888888
Q ss_pred eeccCCcCCCCCCccccccccccccccccccccccCCcccc-c-cccccccCCCC
Q 006982 158 LKLDHNRFSGQIPPQLGQLGRLKSFSVANNLLSGSIPTFVN-L-TLSADSVTNNQ 210 (623)
Q Consensus 158 l~l~~N~~~g~iP~~l~~l~~L~~l~l~~N~l~g~ip~~~~-~-~~~~~~~~~n~ 210 (623)
|+|++|++++..|..+..+++|+.|+|++|+++ .+|..+. + .+....+.+|.
T Consensus 221 L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~ 274 (330)
T 1xku_A 221 LGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPGGLADHKYIQVVYLHNNN 274 (330)
T ss_dssp EECCSSCCCEECTTTGGGSTTCCEEECCSSCCS-SCCTTTTTCSSCCEEECCSSC
T ss_pred EECCCCcCceeChhhccCCCCCCEEECCCCcCc-cCChhhccCCCcCEEECCCCc
Confidence 888888888776777888888888888888887 6665432 1 23334444443
No 355
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.22 E-value=5e-12 Score=128.97 Aligned_cols=109 Identities=16% Similarity=0.121 Sum_probs=92.6
Q ss_pred cEEEEEecCCCceeeCCccc--cCCCCCCEEEcCCCCCCCCCC----hhHhhhcCCCCEEEccCccCCCCCCCCCCCCCC
Q 006982 81 RVLNLRLTDMGLKGQFPRGI--RNCSSMTGLDLSSNKLYGPLP----DDISKLVGFLTSLDLSSNNFSGSIPSNLANCTY 154 (623)
Q Consensus 81 ~v~~l~l~~~~l~g~~p~~l--~~l~~L~~L~L~~N~l~g~ip----~~~~~l~~~L~~L~L~~N~l~g~ip~~~~~l~~ 154 (623)
+++.|+|++|.+++.+|..+ +.+++|++|+|++|.+++.+| ..+..+ ++|++|+|++|++++..|..++++++
T Consensus 92 ~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~-~~L~~L~Ls~n~l~~~~~~~~~~l~~ 170 (310)
T 4glp_A 92 RLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWLK-PGLKVLSIAQAHSPAFSCEQVRAFPA 170 (310)
T ss_dssp CCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBC-SCCCEEEEECCSSCCCCTTSCCCCTT
T ss_pred ceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhhc-cCCCEEEeeCCCcchhhHHHhccCCC
Confidence 38899999999999999998 999999999999999998777 233444 45999999999999888889999999
Q ss_pred CceeeccCCcCCCC--CC--cccccccccccccccccccc
Q 006982 155 LNSLKLDHNRFSGQ--IP--PQLGQLGRLKSFSVANNLLS 190 (623)
Q Consensus 155 L~~l~l~~N~~~g~--iP--~~l~~l~~L~~l~l~~N~l~ 190 (623)
|++|+|++|++.|. +| ..++++++|+.|+|++|+++
T Consensus 171 L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~ 210 (310)
T 4glp_A 171 LTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGME 210 (310)
T ss_dssp CCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCC
T ss_pred CCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCC
Confidence 99999999998763 32 23468889999999999986
No 356
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.22 E-value=5e-12 Score=117.66 Aligned_cols=104 Identities=15% Similarity=0.202 Sum_probs=78.9
Q ss_pred cEEEEEecCCCceeeCCccccCCCCCCEEEcCCCCCCCCCChhH-hhhcCCCCEEEccCccCCCCCCC--CCCCCCCCce
Q 006982 81 RVLNLRLTDMGLKGQFPRGIRNCSSMTGLDLSSNKLYGPLPDDI-SKLVGFLTSLDLSSNNFSGSIPS--NLANCTYLNS 157 (623)
Q Consensus 81 ~v~~l~l~~~~l~g~~p~~l~~l~~L~~L~L~~N~l~g~ip~~~-~~l~~~L~~L~L~~N~l~g~ip~--~~~~l~~L~~ 157 (623)
.+..|+|++|.+++. +.++.+++|++|+|++|.++ .+|+.+ ..+ ++|++|+|++|+++ .+|. .++.+++|+.
T Consensus 43 ~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~-~~~~~~~~~l-~~L~~L~L~~N~i~-~~~~~~~l~~l~~L~~ 117 (176)
T 1a9n_A 43 QFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRIC-RIGEGLDQAL-PDLTELILTNNSLV-ELGDLDPLASLKSLTY 117 (176)
T ss_dssp CCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCC-EECSCHHHHC-TTCCEEECCSCCCC-CGGGGGGGGGCTTCCE
T ss_pred CCCEEECCCCCCCcc--cccccCCCCCEEECCCCccc-ccCcchhhcC-CCCCEEECCCCcCC-cchhhHhhhcCCCCCE
Confidence 577888888888875 56788888888888888888 455544 554 44888888888885 6776 6778888888
Q ss_pred eeccCCcCCCCCCcc----cccccccccccccccccc
Q 006982 158 LKLDHNRFSGQIPPQ----LGQLGRLKSFSVANNLLS 190 (623)
Q Consensus 158 l~l~~N~~~g~iP~~----l~~l~~L~~l~l~~N~l~ 190 (623)
|+|++|.++ .+|.. +..+++|+.|++++|...
T Consensus 118 L~l~~N~i~-~~~~~~~~~~~~l~~L~~Ld~~~n~~~ 153 (176)
T 1a9n_A 118 LCILRNPVT-NKKHYRLYVIYKVPQVRVLDFQKVKLK 153 (176)
T ss_dssp EECCSSGGG-GSTTHHHHHHHHCTTCSEETTEECCHH
T ss_pred EEecCCCCC-CcHhHHHHHHHHCCccceeCCCcCCHH
Confidence 888888887 56764 778888888888887764
No 357
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=99.22 E-value=3.7e-11 Score=119.28 Aligned_cols=145 Identities=13% Similarity=0.038 Sum_probs=112.5
Q ss_pred HHHhccCcccceeeccCccEEEEEEeCCCcEEEEEEecccc-ccHHHHHHHHHHhCCCC-CCCCcceeEEEEeCCeeeEE
Q 006982 301 MKATNSFSKNNIIGSGRTGTMYKALLEDGTSLMVKRLQDSQ-RSEKEFVAEMATLGSVK-NRNLVPLLGFCMAKKERLLV 378 (623)
Q Consensus 301 ~~~~~~f~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~lV 378 (623)
......|.....++.|+.+.||++... +..+++|+..... .....+.+|++++..+. +.++.++++++.+.+..++|
T Consensus 10 ~~~l~~~~~~~~~~g~s~~~v~~~~~~-~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv 88 (263)
T 3tm0_A 10 KKLIEKYRCVKDTEGMSPAKVYKLVGE-NENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLL 88 (263)
T ss_dssp HHHHTTSEEEECCSCCSSSEEEEEECS-SCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEE
T ss_pred HHHhccceeEeeccCCCCCeEEEEECC-CCcEEEEeCCcccCCCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEEE
Confidence 344456777778888888999999865 6789999986532 22335778888888774 67788899999888889999
Q ss_pred EecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhc-----------------------------------
Q 006982 379 YKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHN----------------------------------- 423 (623)
Q Consensus 379 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~----------------------------------- 423 (623)
|||++|.+|.+.+.. ......++.+++++++.||+.
T Consensus 89 ~e~i~G~~l~~~~~~---------~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (263)
T 3tm0_A 89 MSEADGVLCSEEYED---------EQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWE 159 (263)
T ss_dssp EECCSSEEHHHHCCT---------TTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGGS
T ss_pred EEecCCeehhhccCC---------cccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhcccccccccccc
Confidence 999999999887421 122347888999999999981
Q ss_pred ---------------------CCCCcEecCCCCCceeeCCCCCeEEeeccccc
Q 006982 424 ---------------------CNPRIIHRNISSKCILLDDDFEPKISDFGLAR 455 (623)
Q Consensus 424 ---------------------~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~ 455 (623)
..+.++|+|++|.||+++++..+.|+||+.+.
T Consensus 160 ~~~~~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~ 212 (263)
T 3tm0_A 160 EDTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSG 212 (263)
T ss_dssp TTCSSSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCE
T ss_pred ccccCCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhcc
Confidence 01358999999999999887667799998775
No 358
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.22 E-value=1.8e-11 Score=134.60 Aligned_cols=111 Identities=28% Similarity=0.402 Sum_probs=86.4
Q ss_pred CcEEEEEecCCCceeeCCccccCCCCCCEEEcCCCCCCCCCChhHhhhcCCCCEEEccCccCCCCCCCCCCCCCCCceee
Q 006982 80 NRVLNLRLTDMGLKGQFPRGIRNCSSMTGLDLSSNKLYGPLPDDISKLVGFLTSLDLSSNNFSGSIPSNLANCTYLNSLK 159 (623)
Q Consensus 80 ~~v~~l~l~~~~l~g~~p~~l~~l~~L~~L~L~~N~l~g~ip~~~~~l~~~L~~L~L~~N~l~g~ip~~~~~l~~L~~l~ 159 (623)
..++.|+|++|+|+ .+| +.+++|+.|+|++|+|++ ||. +.+ +|++|+|++|+|++ ||. .+++|+.|+
T Consensus 80 ~~L~~L~Ls~N~l~-~ip---~~l~~L~~L~Ls~N~l~~-ip~-l~~---~L~~L~Ls~N~l~~-lp~---~l~~L~~L~ 146 (571)
T 3cvr_A 80 PQITVLEITQNALI-SLP---ELPASLEYLDACDNRLST-LPE-LPA---SLKHLDVDNNQLTM-LPE---LPALLEYIN 146 (571)
T ss_dssp TTCSEEECCSSCCS-CCC---CCCTTCCEEECCSSCCSC-CCC-CCT---TCCEEECCSSCCSC-CCC---CCTTCCEEE
T ss_pred CCCCEEECcCCCCc-ccc---cccCCCCEEEccCCCCCC-cch-hhc---CCCEEECCCCcCCC-CCC---cCccccEEe
Confidence 45888999999988 677 557899999999999986 887 554 48999999999986 777 678888888
Q ss_pred ccCCcCCCCCCccccccccccccccccccccccCCccccccccccccCCC
Q 006982 160 LDHNRFSGQIPPQLGQLGRLKSFSVANNLLSGSIPTFVNLTLSADSVTNN 209 (623)
Q Consensus 160 l~~N~~~g~iP~~l~~l~~L~~l~l~~N~l~g~ip~~~~~~~~~~~~~~n 209 (623)
|++|+|++ +|. .+++|+.|+|++|+|++ +|. +..++....+++|
T Consensus 147 Ls~N~l~~-lp~---~l~~L~~L~Ls~N~L~~-lp~-l~~~L~~L~Ls~N 190 (571)
T 3cvr_A 147 ADNNQLTM-LPE---LPTSLEVLSVRNNQLTF-LPE-LPESLEALDVSTN 190 (571)
T ss_dssp CCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC-CCTTCCEEECCSS
T ss_pred CCCCccCc-CCC---cCCCcCEEECCCCCCCC-cch-hhCCCCEEECcCC
Confidence 88888886 776 56788888888888887 666 3334444455555
No 359
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.19 E-value=2.1e-13 Score=129.68 Aligned_cols=105 Identities=21% Similarity=0.300 Sum_probs=66.4
Q ss_pred cEEEEEecCCCceeeCCc------cccCCCCCCEEEcCCCCCCCCCChhHhhhcCCCCEEEccCccCCCCCCCCCCCCCC
Q 006982 81 RVLNLRLTDMGLKGQFPR------GIRNCSSMTGLDLSSNKLYGPLPDDISKLVGFLTSLDLSSNNFSGSIPSNLANCTY 154 (623)
Q Consensus 81 ~v~~l~l~~~~l~g~~p~------~l~~l~~L~~L~L~~N~l~g~ip~~~~~l~~~L~~L~L~~N~l~g~ip~~~~~l~~ 154 (623)
+++.++|+++.++|.+|+ .++++++|++|+|++|.+++ +| .+..+.+ |++|+|++|+++ .+|..+..+++
T Consensus 19 ~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~-L~~L~l~~n~l~-~l~~~~~~~~~ 94 (198)
T 1ds9_A 19 SVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMEN-LRILSLGRNLIK-KIENLDAVADT 94 (198)
T ss_dssp CCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTT-CCEEEEEEEEEC-SCSSHHHHHHH
T ss_pred cccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCC-CCEEECCCCCcc-cccchhhcCCc
Confidence 344555555566666555 66666666666666666664 66 5666433 666666666666 56665566666
Q ss_pred CceeeccCCcCCCCCCccccccccccccccccccccc
Q 006982 155 LNSLKLDHNRFSGQIPPQLGQLGRLKSFSVANNLLSG 191 (623)
Q Consensus 155 L~~l~l~~N~~~g~iP~~l~~l~~L~~l~l~~N~l~g 191 (623)
|+.|+|++|++++ +| .++.+++|+.|++++|++++
T Consensus 95 L~~L~L~~N~l~~-l~-~~~~l~~L~~L~l~~N~i~~ 129 (198)
T 1ds9_A 95 LEELWISYNQIAS-LS-GIEKLVNLRVLYMSNNKITN 129 (198)
T ss_dssp CSEEEEEEEECCC-HH-HHHHHHHSSEEEESEEECCC
T ss_pred CCEEECcCCcCCc-CC-ccccCCCCCEEECCCCcCCc
Confidence 6666666666664 44 46666666666666666664
No 360
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.17 E-value=2e-11 Score=134.77 Aligned_cols=101 Identities=24% Similarity=0.261 Sum_probs=88.8
Q ss_pred CcEEEEEecCCCceeeCCccccCCCCCCEEEcCCCCCCCCCChhHhhhcCCCCEEEccCccCCCCC-CCCCCCCCCCcee
Q 006982 80 NRVLNLRLTDMGLKGQFPRGIRNCSSMTGLDLSSNKLYGPLPDDISKLVGFLTSLDLSSNNFSGSI-PSNLANCTYLNSL 158 (623)
Q Consensus 80 ~~v~~l~l~~~~l~g~~p~~l~~l~~L~~L~L~~N~l~g~ip~~~~~l~~~L~~L~L~~N~l~g~i-p~~~~~l~~L~~l 158 (623)
..++.|+|++|.|+ .+|..|++|++|+.|+|++|.|++ +| .++.+.+ |+.|+|++|+|++.+ |..++++++|+.|
T Consensus 463 ~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~-lp-~l~~l~~-L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L 538 (567)
T 1dce_A 463 LLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALEN-VD-GVANLPR-LQELLLCNNRLQQSAAIQPLVSCPRLVLL 538 (567)
T ss_dssp TTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSS-CCEEECCSSCCCSSSTTGGGGGCTTCCEE
T ss_pred ccCcEeecCccccc-ccchhhhcCCCCCEEECCCCCCCC-Cc-ccCCCCC-CcEEECCCCCCCCCCCcHHHhcCCCCCEE
Confidence 46899999999999 899999999999999999999996 88 8888754 999999999999877 9999999999999
Q ss_pred eccCCcCCCCCCcc---cccccccccccc
Q 006982 159 KLDHNRFSGQIPPQ---LGQLGRLKSFSV 184 (623)
Q Consensus 159 ~l~~N~~~g~iP~~---l~~l~~L~~l~l 184 (623)
+|++|+|++..|.. +..+++|+.|++
T Consensus 539 ~L~~N~l~~~~~~~~~l~~~lp~L~~L~l 567 (567)
T 1dce_A 539 NLQGNSLCQEEGIQERLAEMLPSVSSILT 567 (567)
T ss_dssp ECTTSGGGGSSSCTTHHHHHCTTCSEEEC
T ss_pred EecCCcCCCCccHHHHHHHHCcccCccCC
Confidence 99999999765532 234788888754
No 361
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.17 E-value=4.6e-11 Score=120.69 Aligned_cols=106 Identities=30% Similarity=0.392 Sum_probs=85.8
Q ss_pred CcEEEEEecCCCceeeCCccccCCCCCCEEEcCCCCCCCCCChhHhhhcCCCCEEEccCccCCCCCCCCCCCCCCCceee
Q 006982 80 NRVLNLRLTDMGLKGQFPRGIRNCSSMTGLDLSSNKLYGPLPDDISKLVGFLTSLDLSSNNFSGSIPSNLANCTYLNSLK 159 (623)
Q Consensus 80 ~~v~~l~l~~~~l~g~~p~~l~~l~~L~~L~L~~N~l~g~ip~~~~~l~~~L~~L~L~~N~l~g~ip~~~~~l~~L~~l~ 159 (623)
.+++.|+|++|.+++..| ++++++|+.|+|++|.+++ +| .+..+. +|++|+|++|++++ + +.+..+++|+.|+
T Consensus 68 ~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~-~~-~l~~l~-~L~~L~L~~n~i~~-~-~~l~~l~~L~~L~ 140 (291)
T 1h6t_A 68 PNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVKD-LS-SLKDLK-KLKSLSLEHNGISD-I-NGLVHLPQLESLY 140 (291)
T ss_dssp TTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-GG-GGTTCT-TCCEEECTTSCCCC-C-GGGGGCTTCCEEE
T ss_pred CCCCEEEccCCccCCCcc--cccCCCCCEEECCCCcCCC-Ch-hhccCC-CCCEEECCCCcCCC-C-hhhcCCCCCCEEE
Confidence 468889999998887544 8889999999999999885 44 477754 49999999999885 4 4688888999999
Q ss_pred ccCCcCCCCCCccccccccccccccccccccccCC
Q 006982 160 LDHNRFSGQIPPQLGQLGRLKSFSVANNLLSGSIP 194 (623)
Q Consensus 160 l~~N~~~g~iP~~l~~l~~L~~l~l~~N~l~g~ip 194 (623)
|++|++++. +.++.+++|+.|++++|++++..|
T Consensus 141 l~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~~~~ 173 (291)
T 1h6t_A 141 LGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP 173 (291)
T ss_dssp CCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG
T ss_pred ccCCcCCcc--hhhccCCCCCEEEccCCccccchh
Confidence 999998864 578888899999999998887655
No 362
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.17 E-value=1.2e-11 Score=121.16 Aligned_cols=127 Identities=17% Similarity=0.205 Sum_probs=101.2
Q ss_pred CcEEEEEecCCC-ceeeCCccccCCCCCCEEEcCC-CCCCCCCChhHhhhcCCCCEEEccCccCCCCCCCCCCCCCCCc-
Q 006982 80 NRVLNLRLTDMG-LKGQFPRGIRNCSSMTGLDLSS-NKLYGPLPDDISKLVGFLTSLDLSSNNFSGSIPSNLANCTYLN- 156 (623)
Q Consensus 80 ~~v~~l~l~~~~-l~g~~p~~l~~l~~L~~L~L~~-N~l~g~ip~~~~~l~~~L~~L~L~~N~l~g~ip~~~~~l~~L~- 156 (623)
.++..|+|++|. +++..+..+.++++|++|+|++ |.+++..|..+..+. +|++|+|++|++++ +|. ++.+++|+
T Consensus 55 ~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~-~L~~L~l~~n~l~~-lp~-~~~l~~L~~ 131 (239)
T 2xwt_C 55 PNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELP-LLKFLGIFNTGLKM-FPD-LTKVYSTDI 131 (239)
T ss_dssp TTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCT-TCCEEEEEEECCCS-CCC-CTTCCBCCS
T ss_pred CCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCC-CCCEEeCCCCCCcc-ccc-ccccccccc
Confidence 578999999997 8877777899999999999998 999954445566654 49999999999996 887 88888888
Q ss_pred --eeeccCC-cCCCCCCcccccccccc-ccccccccccccCCcc-cc-ccccccccCCCC
Q 006982 157 --SLKLDHN-RFSGQIPPQLGQLGRLK-SFSVANNLLSGSIPTF-VN-LTLSADSVTNNQ 210 (623)
Q Consensus 157 --~l~l~~N-~~~g~iP~~l~~l~~L~-~l~l~~N~l~g~ip~~-~~-~~~~~~~~~~n~ 210 (623)
+|+|++| ++++..|..+..+++|+ .|++++|+++ .+|.. +. .++....+.+|.
T Consensus 132 L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~-~i~~~~~~~~~L~~L~L~~n~ 190 (239)
T 2xwt_C 132 FFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFT-SVQGYAFNGTKLDAVYLNKNK 190 (239)
T ss_dssp EEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCC-EECTTTTTTCEEEEEECTTCT
T ss_pred ccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCc-ccCHhhcCCCCCCEEEcCCCC
Confidence 9999999 89866566789999999 9999999998 66653 22 134444555553
No 363
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.17 E-value=2.1e-11 Score=126.36 Aligned_cols=106 Identities=19% Similarity=0.172 Sum_probs=90.2
Q ss_pred CEEEcCCC-CCCCCCChhHhhhcCCCCEEEccC-ccCCCCCCCCCCCCCCCceeeccCCcCCCCCCcccccccccccccc
Q 006982 107 TGLDLSSN-KLYGPLPDDISKLVGFLTSLDLSS-NNFSGSIPSNLANCTYLNSLKLDHNRFSGQIPPQLGQLGRLKSFSV 184 (623)
Q Consensus 107 ~~L~L~~N-~l~g~ip~~~~~l~~~L~~L~L~~-N~l~g~ip~~~~~l~~L~~l~l~~N~~~g~iP~~l~~l~~L~~l~l 184 (623)
..+++++| +|+ .||. +..+. +|+.|+|++ |+|++..|..|++|++|+.|+|++|+|+|..|..|++|++|+.|+|
T Consensus 11 ~~v~~~~~n~l~-~ip~-l~~~~-~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l 87 (347)
T 2ifg_A 11 SGLRCTRDGALD-SLHH-LPGAE-NLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNL 87 (347)
T ss_dssp SCEECCSSCCCT-TTTT-SCSCS-CCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEEC
T ss_pred CEEEcCCCCCCC-ccCC-CCCCC-CeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeC
Confidence 35799998 899 6999 88865 499999996 9999777788999999999999999999988989999999999999
Q ss_pred ccccccccCCcccc-ccccccccCCCCCCCCC
Q 006982 185 ANNLLSGSIPTFVN-LTLSADSVTNNQGLCGE 215 (623)
Q Consensus 185 ~~N~l~g~ip~~~~-~~~~~~~~~~n~~l~~~ 215 (623)
++|+|++..|..+. +.+....+.+|+..|.+
T Consensus 88 ~~N~l~~~~~~~~~~~~L~~l~l~~N~~~c~c 119 (347)
T 2ifg_A 88 SFNALESLSWKTVQGLSLQELVLSGNPLHCSC 119 (347)
T ss_dssp CSSCCSCCCSTTTCSCCCCEEECCSSCCCCCG
T ss_pred CCCccceeCHHHcccCCceEEEeeCCCccCCC
Confidence 99999987665543 34666677888877754
No 364
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.16 E-value=3.2e-11 Score=119.96 Aligned_cols=103 Identities=21% Similarity=0.353 Sum_probs=74.8
Q ss_pred CcEEEEEecCCCceeeCCccccCCCCCCEEEcCCCCCCCCCChhHhhhcCCCCEEEccCccCCCCCCCCCCCCCCCceee
Q 006982 80 NRVLNLRLTDMGLKGQFPRGIRNCSSMTGLDLSSNKLYGPLPDDISKLVGFLTSLDLSSNNFSGSIPSNLANCTYLNSLK 159 (623)
Q Consensus 80 ~~v~~l~l~~~~l~g~~p~~l~~l~~L~~L~L~~N~l~g~ip~~~~~l~~~L~~L~L~~N~l~g~ip~~~~~l~~L~~l~ 159 (623)
..+..|+|++|.+++..| ++++++|+.|+|++|++++ +|.... .+|+.|+|++|++++ +| .++++++|+.|+
T Consensus 63 ~~L~~L~L~~N~i~~~~~--l~~l~~L~~L~L~~N~l~~-l~~~~~---~~L~~L~L~~N~l~~-~~-~l~~l~~L~~L~ 134 (263)
T 1xeu_A 63 TNLKELHLSHNQISDLSP--LKDLTKLEELSVNRNRLKN-LNGIPS---ACLSRLFLDNNELRD-TD-SLIHLKNLEILS 134 (263)
T ss_dssp TTCCEEECCSSCCCCCGG--GTTCSSCCEEECCSSCCSC-CTTCCC---SSCCEEECCSSCCSB-SG-GGTTCTTCCEEE
T ss_pred CCCCEEECCCCccCCChh--hccCCCCCEEECCCCccCC-cCcccc---CcccEEEccCCccCC-Ch-hhcCcccccEEE
Confidence 457778888887776444 7778888888888888874 554332 348888888888875 44 577788888888
Q ss_pred ccCCcCCCCCCcccccccccccccccccccccc
Q 006982 160 LDHNRFSGQIPPQLGQLGRLKSFSVANNLLSGS 192 (623)
Q Consensus 160 l~~N~~~g~iP~~l~~l~~L~~l~l~~N~l~g~ 192 (623)
|++|++++ +| .++.+++|+.|+|++|++++.
T Consensus 135 Ls~N~i~~-~~-~l~~l~~L~~L~L~~N~i~~~ 165 (263)
T 1xeu_A 135 IRNNKLKS-IV-MLGFLSKLEVLDLHGNEITNT 165 (263)
T ss_dssp CTTSCCCB-CG-GGGGCTTCCEEECTTSCCCBC
T ss_pred CCCCcCCC-Ch-HHccCCCCCEEECCCCcCcch
Confidence 88888875 44 577788888888888888766
No 365
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.15 E-value=4e-11 Score=121.13 Aligned_cols=121 Identities=22% Similarity=0.367 Sum_probs=97.9
Q ss_pred CcEEEEEecCCCceeeCCccccCCCCCCEEEcCCCCCCCCCChhHhhhcCCCCEEEccCccCCCCCCCCCCCCCCCceee
Q 006982 80 NRVLNLRLTDMGLKGQFPRGIRNCSSMTGLDLSSNKLYGPLPDDISKLVGFLTSLDLSSNNFSGSIPSNLANCTYLNSLK 159 (623)
Q Consensus 80 ~~v~~l~l~~~~l~g~~p~~l~~l~~L~~L~L~~N~l~g~ip~~~~~l~~~L~~L~L~~N~l~g~ip~~~~~l~~L~~l~ 159 (623)
.++..|+|++|.+++ + +.++.+++|+.|+|++|.+++ + +.+..+. +|+.|+|++|++++. ..++.+++|++|+
T Consensus 90 ~~L~~L~l~~n~l~~-~-~~l~~l~~L~~L~L~~n~i~~-~-~~l~~l~-~L~~L~l~~n~l~~~--~~l~~l~~L~~L~ 162 (291)
T 1h6t_A 90 KNLGWLFLDENKVKD-L-SSLKDLKKLKSLSLEHNGISD-I-NGLVHLP-QLESLYLGNNKITDI--TVLSRLTKLDTLS 162 (291)
T ss_dssp TTCCEEECCSSCCCC-G-GGGTTCTTCCEEECTTSCCCC-C-GGGGGCT-TCCEEECCSSCCCCC--GGGGGCTTCSEEE
T ss_pred CCCCEEECCCCcCCC-C-hhhccCCCCCEEECCCCcCCC-C-hhhcCCC-CCCEEEccCCcCCcc--hhhccCCCCCEEE
Confidence 568999999999987 3 459999999999999999996 4 4677765 599999999999964 5789999999999
Q ss_pred ccCCcCCCCCCccccccccccccccccccccccCCccccc-cccccccCCCC
Q 006982 160 LDHNRFSGQIPPQLGQLGRLKSFSVANNLLSGSIPTFVNL-TLSADSVTNNQ 210 (623)
Q Consensus 160 l~~N~~~g~iP~~l~~l~~L~~l~l~~N~l~g~ip~~~~~-~~~~~~~~~n~ 210 (623)
|++|++++..| +..+++|+.|+|++|.+++ +|....+ .+....+.+|+
T Consensus 163 L~~N~l~~~~~--l~~l~~L~~L~L~~N~i~~-l~~l~~l~~L~~L~l~~n~ 211 (291)
T 1h6t_A 163 LEDNQISDIVP--LAGLTKLQNLYLSKNHISD-LRALAGLKNLDVLELFSQE 211 (291)
T ss_dssp CCSSCCCCCGG--GTTCTTCCEEECCSSCCCB-CGGGTTCTTCSEEEEEEEE
T ss_pred ccCCccccchh--hcCCCccCEEECCCCcCCC-ChhhccCCCCCEEECcCCc
Confidence 99999997544 8999999999999999986 4543222 33344445553
No 366
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.14 E-value=8.8e-11 Score=126.32 Aligned_cols=102 Identities=25% Similarity=0.398 Sum_probs=72.7
Q ss_pred CcEEEEEecCCCceeeCCccccCCCCCCEEEcCCCCCCCCCChhHhhhcCCCCEEEccCccCCCCCCCCCCCCCCCceee
Q 006982 80 NRVLNLRLTDMGLKGQFPRGIRNCSSMTGLDLSSNKLYGPLPDDISKLVGFLTSLDLSSNNFSGSIPSNLANCTYLNSLK 159 (623)
Q Consensus 80 ~~v~~l~l~~~~l~g~~p~~l~~l~~L~~L~L~~N~l~g~ip~~~~~l~~~L~~L~L~~N~l~g~ip~~~~~l~~L~~l~ 159 (623)
..++.|+|++|.+++ +| +++++++|++|+|++|++++ +|..+ .+|++|+|++|++++ +| .++++++|++|+
T Consensus 131 ~~L~~L~L~~n~l~~-lp-~~~~l~~L~~L~l~~N~l~~-lp~~~----~~L~~L~L~~n~l~~-l~-~~~~l~~L~~L~ 201 (454)
T 1jl5_A 131 PLLEYLGVSNNQLEK-LP-ELQNSSFLKIIDVDNNSLKK-LPDLP----PSLEFIAAGNNQLEE-LP-ELQNLPFLTAIY 201 (454)
T ss_dssp TTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSC-CCCCC----TTCCEEECCSSCCSS-CC-CCTTCTTCCEEE
T ss_pred CCCCEEECcCCCCCC-Cc-ccCCCCCCCEEECCCCcCcc-cCCCc----ccccEEECcCCcCCc-Cc-cccCCCCCCEEE
Confidence 356777777777776 66 57888888888888888874 66543 247888888888885 66 577888888888
Q ss_pred ccCCcCCCCCCccccccccccccccccccccccCCc
Q 006982 160 LDHNRFSGQIPPQLGQLGRLKSFSVANNLLSGSIPT 195 (623)
Q Consensus 160 l~~N~~~g~iP~~l~~l~~L~~l~l~~N~l~g~ip~ 195 (623)
+++|++++ +|... ++|+.|++++|.++ .+|.
T Consensus 202 l~~N~l~~-l~~~~---~~L~~L~l~~n~l~-~lp~ 232 (454)
T 1jl5_A 202 ADNNSLKK-LPDLP---LSLESIVAGNNILE-ELPE 232 (454)
T ss_dssp CCSSCCSS-CCCCC---TTCCEEECCSSCCS-SCCC
T ss_pred CCCCcCCc-CCCCc---CcccEEECcCCcCC-cccc
Confidence 88888775 55432 46677777777776 5664
No 367
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.14 E-value=3.1e-13 Score=128.44 Aligned_cols=109 Identities=17% Similarity=0.222 Sum_probs=97.7
Q ss_pred CcEEEEEecCCCceeeCCccccCCCCCCEEEcCCCCCCCCCChhHhhhcCCCCEEEccCccCCCCCCCCCCCCCCCceee
Q 006982 80 NRVLNLRLTDMGLKGQFPRGIRNCSSMTGLDLSSNKLYGPLPDDISKLVGFLTSLDLSSNNFSGSIPSNLANCTYLNSLK 159 (623)
Q Consensus 80 ~~v~~l~l~~~~l~g~~p~~l~~l~~L~~L~L~~N~l~g~ip~~~~~l~~~L~~L~L~~N~l~g~ip~~~~~l~~L~~l~ 159 (623)
..+..|+|++|.+++ +| .++++++|++|+|++|.++ .+|..+..+.+ |++|+|++|++++ +| .++.+++|++|+
T Consensus 48 ~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~~~~~-L~~L~L~~N~l~~-l~-~~~~l~~L~~L~ 121 (198)
T 1ds9_A 48 KACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDAVADT-LEELWISYNQIAS-LS-GIEKLVNLRVLY 121 (198)
T ss_dssp TTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHHHHHH-CSEEEEEEEECCC-HH-HHHHHHHSSEEE
T ss_pred CCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhhcCCc-CCEEECcCCcCCc-CC-ccccCCCCCEEE
Confidence 468899999999998 77 8999999999999999999 79988877654 9999999999996 67 689999999999
Q ss_pred ccCCcCCCCCC--ccccccccccccccccccccccCCc
Q 006982 160 LDHNRFSGQIP--PQLGQLGRLKSFSVANNLLSGSIPT 195 (623)
Q Consensus 160 l~~N~~~g~iP--~~l~~l~~L~~l~l~~N~l~g~ip~ 195 (623)
|++|++++ +| ..+..+++|+.|++++|.+++.+|.
T Consensus 122 l~~N~i~~-~~~~~~l~~l~~L~~L~l~~N~l~~~~~~ 158 (198)
T 1ds9_A 122 MSNNKITN-WGEIDKLAALDKLEDLLLAGNPLYNDYKE 158 (198)
T ss_dssp ESEEECCC-HHHHHHHTTTTTCSEEEECSCHHHHHHHT
T ss_pred CCCCcCCc-hhHHHHHhcCCCCCEEEecCCcccccccc
Confidence 99999995 44 4789999999999999999998775
No 368
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.14 E-value=5.9e-11 Score=131.82 Aligned_cols=106 Identities=30% Similarity=0.396 Sum_probs=65.1
Q ss_pred CcEEEEEecCCCceeeCCccccCCCCCCEEEcCCCCCCCCCChhHhhhcCCCCEEEccCccCCCCCCCCCCCCCCCceee
Q 006982 80 NRVLNLRLTDMGLKGQFPRGIRNCSSMTGLDLSSNKLYGPLPDDISKLVGFLTSLDLSSNNFSGSIPSNLANCTYLNSLK 159 (623)
Q Consensus 80 ~~v~~l~l~~~~l~g~~p~~l~~l~~L~~L~L~~N~l~g~ip~~~~~l~~~L~~L~L~~N~l~g~ip~~~~~l~~L~~l~ 159 (623)
..+..|+|++|.+++..| +..|++|+.|+|++|.|++ +| .+..+. +|+.|+|++|++++ + +.+..+++|+.|+
T Consensus 65 ~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~-l~-~l~~l~-~L~~L~Ls~N~l~~-l-~~l~~l~~L~~L~ 137 (605)
T 1m9s_A 65 PNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLDENKIKD-LS-SLKDLK-KLKSLSLEHNGISD-I-NGLVHLPQLESLY 137 (605)
T ss_dssp TTCCEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCC-CT-TSTTCT-TCCEEECTTSCCCC-C-GGGGGCTTCSEEE
T ss_pred CCCCEEEeeCCCCCCChh--hccCCCCCEEECcCCCCCC-Ch-hhccCC-CCCEEEecCCCCCC-C-ccccCCCccCEEE
Confidence 356667777777665443 6666666666666666663 33 455543 36666666666664 3 2466666666666
Q ss_pred ccCCcCCCCCCccccccccccccccccccccccCC
Q 006982 160 LDHNRFSGQIPPQLGQLGRLKSFSVANNLLSGSIP 194 (623)
Q Consensus 160 l~~N~~~g~iP~~l~~l~~L~~l~l~~N~l~g~ip 194 (623)
|++|++++. +.++.+++|+.|+|++|.|++.+|
T Consensus 138 Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~~~~ 170 (605)
T 1m9s_A 138 LGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP 170 (605)
T ss_dssp CCSSCCCCC--GGGGSCTTCSEEECCSSCCCCCGG
T ss_pred CCCCccCCc--hhhcccCCCCEEECcCCcCCCchh
Confidence 666666643 456666666666666666666555
No 369
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.13 E-value=1.3e-11 Score=126.37 Aligned_cols=114 Identities=21% Similarity=0.306 Sum_probs=99.3
Q ss_pred CcEEEEEecCCCceeeCCccc-cCCCCCCEEEcCCCCCCCCCChhHhhhcCCCCEEEccCccCCCCCCCCCCCCCCCcee
Q 006982 80 NRVLNLRLTDMGLKGQFPRGI-RNCSSMTGLDLSSNKLYGPLPDDISKLVGFLTSLDLSSNNFSGSIPSNLANCTYLNSL 158 (623)
Q Consensus 80 ~~v~~l~l~~~~l~g~~p~~l-~~l~~L~~L~L~~N~l~g~ip~~~~~l~~~L~~L~L~~N~l~g~ip~~~~~l~~L~~l 158 (623)
.++..|+|++|.+++..|..+ ..+++|+.|+|++|.+++ +|... .+ ++|++|+|++|+++ .+|..+..+++|+.|
T Consensus 144 ~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~-~~~~~-~l-~~L~~L~Ls~N~l~-~l~~~~~~l~~L~~L 219 (317)
T 3o53_A 144 SRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYD-VKGQV-VF-AKLKTLDLSSNKLA-FMGPEFQSAAGVTWI 219 (317)
T ss_dssp SSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCE-EECCC-CC-TTCCEEECCSSCCC-EECGGGGGGTTCSEE
T ss_pred CCCCEEECCCCCCCcccHHHHhhccCcCCEEECCCCcCcc-ccccc-cc-ccCCEEECCCCcCC-cchhhhcccCcccEE
Confidence 469999999999999888877 489999999999999995 45443 34 45999999999999 467779999999999
Q ss_pred eccCCcCCCCCCcccccccccccccccccccc-ccCCcccc
Q 006982 159 KLDHNRFSGQIPPQLGQLGRLKSFSVANNLLS-GSIPTFVN 198 (623)
Q Consensus 159 ~l~~N~~~g~iP~~l~~l~~L~~l~l~~N~l~-g~ip~~~~ 198 (623)
+|++|+++ .+|..+..+++|+.|++++|.++ +.+|..+.
T Consensus 220 ~L~~N~l~-~l~~~~~~l~~L~~L~l~~N~~~~~~~~~~~~ 259 (317)
T 3o53_A 220 SLRNNKLV-LIEKALRFSQNLEHFDLRGNGFHCGTLRDFFS 259 (317)
T ss_dssp ECTTSCCC-EECTTCCCCTTCCEEECTTCCCBHHHHHHHHH
T ss_pred ECcCCccc-chhhHhhcCCCCCEEEccCCCccCcCHHHHHh
Confidence 99999999 68999999999999999999999 77776543
No 370
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.12 E-value=9.9e-11 Score=119.22 Aligned_cols=106 Identities=31% Similarity=0.482 Sum_probs=75.4
Q ss_pred CcEEEEEecCCCceeeCCccccCCCCCCEEEcCCCCCCCCCChhHhhhcCCCCEEEccCccCCCCCCCCCCCCCCCceee
Q 006982 80 NRVLNLRLTDMGLKGQFPRGIRNCSSMTGLDLSSNKLYGPLPDDISKLVGFLTSLDLSSNNFSGSIPSNLANCTYLNSLK 159 (623)
Q Consensus 80 ~~v~~l~l~~~~l~g~~p~~l~~l~~L~~L~L~~N~l~g~ip~~~~~l~~~L~~L~L~~N~l~g~ip~~~~~l~~L~~l~ 159 (623)
.+++.|+|++|.+++..+ +..+++|++|+|++|.+++ +| .+..+. +|++|+|++|++++ +|. +..+++|++|+
T Consensus 63 ~~L~~L~L~~n~i~~~~~--~~~l~~L~~L~L~~n~l~~-~~-~~~~l~-~L~~L~l~~n~l~~-~~~-l~~l~~L~~L~ 135 (308)
T 1h6u_A 63 NNLIGLELKDNQITDLAP--LKNLTKITELELSGNPLKN-VS-AIAGLQ-SIKTLDLTSTQITD-VTP-LAGLSNLQVLY 135 (308)
T ss_dssp TTCCEEECCSSCCCCCGG--GTTCCSCCEEECCSCCCSC-CG-GGTTCT-TCCEEECTTSCCCC-CGG-GTTCTTCCEEE
T ss_pred CCCCEEEccCCcCCCChh--HccCCCCCEEEccCCcCCC-ch-hhcCCC-CCCEEECCCCCCCC-chh-hcCCCCCCEEE
Confidence 457778888887776443 7778888888888888774 44 566654 48888888888875 443 77778888888
Q ss_pred ccCCcCCCCCCccccccccccccccccccccccCC
Q 006982 160 LDHNRFSGQIPPQLGQLGRLKSFSVANNLLSGSIP 194 (623)
Q Consensus 160 l~~N~~~g~iP~~l~~l~~L~~l~l~~N~l~g~ip 194 (623)
|++|++++. |+ ++.+++|+.|++++|.+++..|
T Consensus 136 l~~n~l~~~-~~-l~~l~~L~~L~l~~n~l~~~~~ 168 (308)
T 1h6u_A 136 LDLNQITNI-SP-LAGLTNLQYLSIGNAQVSDLTP 168 (308)
T ss_dssp CCSSCCCCC-GG-GGGCTTCCEEECCSSCCCCCGG
T ss_pred CCCCccCcC-cc-ccCCCCccEEEccCCcCCCChh
Confidence 888887753 33 7777778888888877776433
No 371
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.11 E-value=1.4e-10 Score=115.30 Aligned_cols=120 Identities=23% Similarity=0.311 Sum_probs=95.8
Q ss_pred CcEEEEEecCCCceeeCCccccCCCCCCEEEcCCCCCCCCCChhHhhhcCCCCEEEccCccCCCCCCCCCCCCCCCceee
Q 006982 80 NRVLNLRLTDMGLKGQFPRGIRNCSSMTGLDLSSNKLYGPLPDDISKLVGFLTSLDLSSNNFSGSIPSNLANCTYLNSLK 159 (623)
Q Consensus 80 ~~v~~l~l~~~~l~g~~p~~l~~l~~L~~L~L~~N~l~g~ip~~~~~l~~~L~~L~L~~N~l~g~ip~~~~~l~~L~~l~ 159 (623)
.+++.|++++|+++. +| .++.+++|+.|+|++|.+++ +|+ +..+. +|++|+|++|++++ +|.... ++|+.|+
T Consensus 41 ~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~L~~N~i~~-~~~-l~~l~-~L~~L~L~~N~l~~-l~~~~~--~~L~~L~ 112 (263)
T 1xeu_A 41 SGVQNFNGDNSNIQS-LA-GMQFFTNLKELHLSHNQISD-LSP-LKDLT-KLEELSVNRNRLKN-LNGIPS--ACLSRLF 112 (263)
T ss_dssp TTCSEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCC-CGG-GTTCS-SCCEEECCSSCCSC-CTTCCC--SSCCEEE
T ss_pred CcCcEEECcCCCccc-ch-HHhhCCCCCEEECCCCccCC-Chh-hccCC-CCCEEECCCCccCC-cCcccc--CcccEEE
Confidence 458899999999984 56 79999999999999999995 565 77765 59999999999995 665433 9999999
Q ss_pred ccCCcCCCCCCccccccccccccccccccccccCCccccc-cccccccCCCC
Q 006982 160 LDHNRFSGQIPPQLGQLGRLKSFSVANNLLSGSIPTFVNL-TLSADSVTNNQ 210 (623)
Q Consensus 160 l~~N~~~g~iP~~l~~l~~L~~l~l~~N~l~g~ip~~~~~-~~~~~~~~~n~ 210 (623)
|++|++++ +| .++.+++|+.|+|++|++++. |....+ .+....+.+|.
T Consensus 113 L~~N~l~~-~~-~l~~l~~L~~L~Ls~N~i~~~-~~l~~l~~L~~L~L~~N~ 161 (263)
T 1xeu_A 113 LDNNELRD-TD-SLIHLKNLEILSIRNNKLKSI-VMLGFLSKLEVLDLHGNE 161 (263)
T ss_dssp CCSSCCSB-SG-GGTTCTTCCEEECTTSCCCBC-GGGGGCTTCCEEECTTSC
T ss_pred ccCCccCC-Ch-hhcCcccccEEECCCCcCCCC-hHHccCCCCCEEECCCCc
Confidence 99999996 44 699999999999999999975 432222 33444555554
No 372
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.11 E-value=8.9e-11 Score=130.43 Aligned_cols=121 Identities=22% Similarity=0.348 Sum_probs=94.7
Q ss_pred CcEEEEEecCCCceeeCCccccCCCCCCEEEcCCCCCCCCCChhHhhhcCCCCEEEccCccCCCCCCCCCCCCCCCceee
Q 006982 80 NRVLNLRLTDMGLKGQFPRGIRNCSSMTGLDLSSNKLYGPLPDDISKLVGFLTSLDLSSNNFSGSIPSNLANCTYLNSLK 159 (623)
Q Consensus 80 ~~v~~l~l~~~~l~g~~p~~l~~l~~L~~L~L~~N~l~g~ip~~~~~l~~~L~~L~L~~N~l~g~ip~~~~~l~~L~~l~ 159 (623)
.++..|+|++|.+++ + +.++.|++|+.|+|++|.+++ +| .+..+. +|+.|+|++|++++. ..++.+++|+.|+
T Consensus 87 ~~L~~L~Ls~N~l~~-l-~~l~~l~~L~~L~Ls~N~l~~-l~-~l~~l~-~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~ 159 (605)
T 1m9s_A 87 KNLGWLFLDENKIKD-L-SSLKDLKKLKSLSLEHNGISD-IN-GLVHLP-QLESLYLGNNKITDI--TVLSRLTKLDTLS 159 (605)
T ss_dssp TTCCEEECCSSCCCC-C-TTSTTCTTCCEEECTTSCCCC-CG-GGGGCT-TCSEEECCSSCCCCC--GGGGSCTTCSEEE
T ss_pred CCCCEEECcCCCCCC-C-hhhccCCCCCEEEecCCCCCC-Cc-cccCCC-ccCEEECCCCccCCc--hhhcccCCCCEEE
Confidence 468889999999986 3 378999999999999999995 44 577764 499999999999964 5788999999999
Q ss_pred ccCCcCCCCCCccccccccccccccccccccccCCccccc-cccccccCCCC
Q 006982 160 LDHNRFSGQIPPQLGQLGRLKSFSVANNLLSGSIPTFVNL-TLSADSVTNNQ 210 (623)
Q Consensus 160 l~~N~~~g~iP~~l~~l~~L~~l~l~~N~l~g~ip~~~~~-~~~~~~~~~n~ 210 (623)
|++|+|++..| +..+++|+.|+|++|+|++. |....+ .+....+.+|+
T Consensus 160 Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~i~~l-~~l~~l~~L~~L~L~~N~ 208 (605)
T 1m9s_A 160 LEDNQISDIVP--LAGLTKLQNLYLSKNHISDL-RALAGLKNLDVLELFSQE 208 (605)
T ss_dssp CCSSCCCCCGG--GTTCTTCCEEECCSSCCCBC-GGGTTCTTCSEEECCSEE
T ss_pred CcCCcCCCchh--hccCCCCCEEECcCCCCCCC-hHHccCCCCCEEEccCCc
Confidence 99999997666 88999999999999999874 543222 33444455553
No 373
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.10 E-value=7.9e-11 Score=119.98 Aligned_cols=121 Identities=27% Similarity=0.398 Sum_probs=92.4
Q ss_pred CcEEEEEecCCCceeeCCccccCCCCCCEEEcCCCCCCCCCChhHhhhcCCCCEEEccCccCCCCCCCCCCCCCCCceee
Q 006982 80 NRVLNLRLTDMGLKGQFPRGIRNCSSMTGLDLSSNKLYGPLPDDISKLVGFLTSLDLSSNNFSGSIPSNLANCTYLNSLK 159 (623)
Q Consensus 80 ~~v~~l~l~~~~l~g~~p~~l~~l~~L~~L~L~~N~l~g~ip~~~~~l~~~L~~L~L~~N~l~g~ip~~~~~l~~L~~l~ 159 (623)
.++..|+|++|.+++. +.++.+++|+.|+|++|.+++ +|. +..+. +|++|+|++|++++. |. ++.+++|++|+
T Consensus 85 ~~L~~L~L~~n~l~~~--~~~~~l~~L~~L~l~~n~l~~-~~~-l~~l~-~L~~L~l~~n~l~~~-~~-l~~l~~L~~L~ 157 (308)
T 1h6u_A 85 TKITELELSGNPLKNV--SAIAGLQSIKTLDLTSTQITD-VTP-LAGLS-NLQVLYLDLNQITNI-SP-LAGLTNLQYLS 157 (308)
T ss_dssp CSCCEEECCSCCCSCC--GGGTTCTTCCEEECTTSCCCC-CGG-GTTCT-TCCEEECCSSCCCCC-GG-GGGCTTCCEEE
T ss_pred CCCCEEEccCCcCCCc--hhhcCCCCCCEEECCCCCCCC-chh-hcCCC-CCCEEECCCCccCcC-cc-ccCCCCccEEE
Confidence 5688999999998863 468899999999999999985 554 77754 499999999999854 43 88899999999
Q ss_pred ccCCcCCCCCCccccccccccccccccccccccCCccccc-cccccccCCCC
Q 006982 160 LDHNRFSGQIPPQLGQLGRLKSFSVANNLLSGSIPTFVNL-TLSADSVTNNQ 210 (623)
Q Consensus 160 l~~N~~~g~iP~~l~~l~~L~~l~l~~N~l~g~ip~~~~~-~~~~~~~~~n~ 210 (623)
|++|++++ +|. +..+++|+.|++++|++++..| ...+ .+....+++|.
T Consensus 158 l~~n~l~~-~~~-l~~l~~L~~L~l~~n~l~~~~~-l~~l~~L~~L~L~~N~ 206 (308)
T 1h6u_A 158 IGNAQVSD-LTP-LANLSKLTTLKADDNKISDISP-LASLPNLIEVHLKNNQ 206 (308)
T ss_dssp CCSSCCCC-CGG-GTTCTTCCEEECCSSCCCCCGG-GGGCTTCCEEECTTSC
T ss_pred ccCCcCCC-Chh-hcCCCCCCEEECCCCccCcChh-hcCCCCCCEEEccCCc
Confidence 99999985 554 8888999999999999887554 2111 33344455553
No 374
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.09 E-value=2.5e-11 Score=135.05 Aligned_cols=134 Identities=24% Similarity=0.289 Sum_probs=92.4
Q ss_pred CCCCCCCCCCCCCCcccceeecCC-----CCCcEEEEEecCCCceeeCCccccCCCCCCEEEcCCCCCCCCCChhHhhhc
Q 006982 54 SSWNFNNDTEGFICKFTGVECWHP-----DENRVLNLRLTDMGLKGQFPRGIRNCSSMTGLDLSSNKLYGPLPDDISKLV 128 (623)
Q Consensus 54 ~sW~~~~~~~~~~c~w~gv~c~~~-----~~~~v~~l~l~~~~l~g~~p~~l~~l~~L~~L~L~~N~l~g~ip~~~~~l~ 128 (623)
++|.... +||.|+|..|... ....++.|++++|+|+ .+|..+. ++|+.|+|++|+|+ .||. . .
T Consensus 13 ~~W~~~~----~~~~~~~r~~~~~~~~~c~~~~l~~L~ls~n~L~-~lp~~l~--~~L~~L~L~~N~l~-~lp~---~-l 80 (622)
T 3g06_A 13 SAWRRAA----PAEESRGRAAVVQKMRACLNNGNAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLT-SLPA---L-P 80 (622)
T ss_dssp HHHHHTC----CGGGHHHHHHHHHHHHHHHHHCCCEEECCSSCCS-CCCSCCC--TTCSEEEECSCCCS-CCCC---C-C
T ss_pred HHHHhcC----CcchhccccccCcccccccCCCCcEEEecCCCcC-ccChhhC--CCCcEEEecCCCCC-CCCC---c-C
Confidence 4786433 4889977422100 1134788899999988 7887775 78999999999888 6777 2 3
Q ss_pred CCCCEEEccCccCCCCCCCCCCCCCCCceeeccCCcCCCCCCccccccccccccccccccccccCCccccccccccccCC
Q 006982 129 GFLTSLDLSSNNFSGSIPSNLANCTYLNSLKLDHNRFSGQIPPQLGQLGRLKSFSVANNLLSGSIPTFVNLTLSADSVTN 208 (623)
Q Consensus 129 ~~L~~L~L~~N~l~g~ip~~~~~l~~L~~l~l~~N~~~g~iP~~l~~l~~L~~l~l~~N~l~g~ip~~~~~~~~~~~~~~ 208 (623)
++|++|+|++|+|+ .||. .+++|++|+|++|++++ +|. .+++|+.|++++|++++ +|.... ++....+++
T Consensus 81 ~~L~~L~Ls~N~l~-~lp~---~l~~L~~L~Ls~N~l~~-l~~---~l~~L~~L~L~~N~l~~-lp~~l~-~L~~L~Ls~ 150 (622)
T 3g06_A 81 PELRTLEVSGNQLT-SLPV---LPPGLLELSIFSNPLTH-LPA---LPSGLCKLWIFGNQLTS-LPVLPP-GLQELSVSD 150 (622)
T ss_dssp TTCCEEEECSCCCS-CCCC---CCTTCCEEEECSCCCCC-CCC---CCTTCCEEECCSSCCSC-CCCCCT-TCCEEECCS
T ss_pred CCCCEEEcCCCcCC-cCCC---CCCCCCEEECcCCcCCC-CCC---CCCCcCEEECCCCCCCc-CCCCCC-CCCEEECcC
Confidence 45888999999888 5776 67888888888888884 665 45677777788887775 454332 333444444
Q ss_pred C
Q 006982 209 N 209 (623)
Q Consensus 209 n 209 (623)
|
T Consensus 151 N 151 (622)
T 3g06_A 151 N 151 (622)
T ss_dssp S
T ss_pred C
Confidence 4
No 375
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=99.09 E-value=7.9e-11 Score=116.44 Aligned_cols=129 Identities=14% Similarity=0.125 Sum_probs=96.6
Q ss_pred eccCccEEEEEEeCCCcEEEEEEeccccccHHHHHHHHHHhCCCCCCC--CcceeEEEEeCCeeeEEEecCCCCCHhhhc
Q 006982 314 GSGRTGTMYKALLEDGTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRN--LVPLLGFCMAKKERLLVYKHMPNGSLYDLL 391 (623)
Q Consensus 314 G~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~h~n--iv~l~~~~~~~~~~~lV~e~~~~gsL~~~l 391 (623)
+.|..+.||++...+|..+++|..... ....+..|++++..+.+.+ +.+++++....+..++||||++|.++. .
T Consensus 29 ~gg~~~~v~~~~~~~g~~~vlK~~~~~--~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~e~i~G~~l~--~ 104 (264)
T 1nd4_A 29 IGCSDAAVFRLSAQGRPVLFVKTDLSG--ALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQDLL--S 104 (264)
T ss_dssp CTTSSCEEEEEECTTSCCEEEEEECSC--TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCSSEETT--T
T ss_pred cCCCCceEEEEecCCCCeEEEEeCCcc--cchhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEEEecCCcccC--c
Confidence 455669999998877888999987654 2245678888888885544 455888888777889999999998884 2
Q ss_pred cCCCCCCCccChHHHHHHHHHHHHHHHHHHhcC-----------------------------------------------
Q 006982 392 HPADDTGKSVDWPRRLKIAIGAARGFAWLHHNC----------------------------------------------- 424 (623)
Q Consensus 392 ~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~----------------------------------------------- 424 (623)
.. .+ ...++.++++.++.||+..
T Consensus 105 ~~-------~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 174 (264)
T 1nd4_A 105 SH-------LA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLAPAELFARL 174 (264)
T ss_dssp SC-------CC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTCCHHHHHHHH
T ss_pred Cc-------CC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhccCccHHHHHHHH
Confidence 10 11 2356777888888888642
Q ss_pred --------CCCcEecCCCCCceeeCCCCCeEEeecccccc
Q 006982 425 --------NPRIIHRNISSKCILLDDDFEPKISDFGLARL 456 (623)
Q Consensus 425 --------~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~ 456 (623)
.+.++|+|++|.||+++++..+.|+||+.+..
T Consensus 175 ~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~~ 214 (264)
T 1nd4_A 175 KARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLGV 214 (264)
T ss_dssp HHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCEE
T ss_pred HHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhccc
Confidence 11399999999999998876677999998763
No 376
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=99.09 E-value=1.2e-10 Score=125.32 Aligned_cols=121 Identities=17% Similarity=0.144 Sum_probs=89.8
Q ss_pred CcEEEEEecCCCceeeCCccccCCCCCCEEEcCCCCCCCCCChhHhhhcCCCCEEEccCccCCCCCCCCCCCCCCCceee
Q 006982 80 NRVLNLRLTDMGLKGQFPRGIRNCSSMTGLDLSSNKLYGPLPDDISKLVGFLTSLDLSSNNFSGSIPSNLANCTYLNSLK 159 (623)
Q Consensus 80 ~~v~~l~l~~~~l~g~~p~~l~~l~~L~~L~L~~N~l~g~ip~~~~~l~~~L~~L~L~~N~l~g~ip~~~~~l~~L~~l~ 159 (623)
..+..|+|++|++++ +| ++.+++|+.|+|++|.+++. + ++.+. +|++|+|++|+++| +| ++.+++|+.|+
T Consensus 170 ~~L~~L~ls~n~l~~-l~--l~~l~~L~~L~l~~N~l~~~-~--l~~l~-~L~~L~Ls~N~l~~-ip--~~~l~~L~~L~ 239 (457)
T 3bz5_A 170 TQLTTLDCSFNKITE-LD--VSQNKLLNRLNCDTNNITKL-D--LNQNI-QLTFLDCSSNKLTE-ID--VTPLTQLTYFD 239 (457)
T ss_dssp TTCCEEECCSSCCCC-CC--CTTCTTCCEEECCSSCCSCC-C--CTTCT-TCSEEECCSSCCSC-CC--CTTCTTCSEEE
T ss_pred CcCCEEECCCCccce-ec--cccCCCCCEEECcCCcCCee-c--cccCC-CCCEEECcCCcccc-cC--ccccCCCCEEE
Confidence 467889999999988 55 88889999999999999864 3 66654 49999999999997 77 78889999999
Q ss_pred ccCCcCCCCCCccccccc-------cccccccccccccccCCccccccccccccCCCC
Q 006982 160 LDHNRFSGQIPPQLGQLG-------RLKSFSVANNLLSGSIPTFVNLTLSADSVTNNQ 210 (623)
Q Consensus 160 l~~N~~~g~iP~~l~~l~-------~L~~l~l~~N~l~g~ip~~~~~~~~~~~~~~n~ 210 (623)
|++|+++|..+..+.++. +|+.|++++|.+.|.+|...--.+....+++|.
T Consensus 240 l~~N~l~~~~~~~l~~L~~L~l~~n~L~~L~l~~n~~~~~~~~~~l~~L~~L~Ls~n~ 297 (457)
T 3bz5_A 240 CSVNPLTELDVSTLSKLTTLHCIQTDLLEIDLTHNTQLIYFQAEGCRKIKELDVTHNT 297 (457)
T ss_dssp CCSSCCSCCCCTTCTTCCEEECTTCCCSCCCCTTCTTCCEEECTTCTTCCCCCCTTCT
T ss_pred eeCCcCCCcCHHHCCCCCEEeccCCCCCEEECCCCccCCcccccccccCCEEECCCCc
Confidence 999999886555555555 566778888887777773211134444455554
No 377
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=99.08 E-value=9.2e-11 Score=121.38 Aligned_cols=106 Identities=25% Similarity=0.339 Sum_probs=52.5
Q ss_pred cEEEEEecCCCceeeCCccccCCCCCCEEEcCCCCCCCCCChhHhhhcCCCCEEEccCccCCCCCCCCCCCCCCCceeec
Q 006982 81 RVLNLRLTDMGLKGQFPRGIRNCSSMTGLDLSSNKLYGPLPDDISKLVGFLTSLDLSSNNFSGSIPSNLANCTYLNSLKL 160 (623)
Q Consensus 81 ~v~~l~l~~~~l~g~~p~~l~~l~~L~~L~L~~N~l~g~ip~~~~~l~~~L~~L~L~~N~l~g~ip~~~~~l~~L~~l~l 160 (623)
.+..|++++|.+++..+ +..+++|+.|+|++|.+++ +|. +..+. +|+.|+|++|.+++ + +.+..+++|++|+|
T Consensus 200 ~L~~L~l~~n~l~~~~~--~~~~~~L~~L~l~~n~l~~-~~~-~~~l~-~L~~L~l~~n~l~~-~-~~~~~l~~L~~L~l 272 (347)
T 4fmz_A 200 SLHYFTAYVNQITDITP--VANMTRLNSLKIGNNKITD-LSP-LANLS-QLTWLEIGTNQISD-I-NAVKDLTKLKMLNV 272 (347)
T ss_dssp TCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCC-CGG-GTTCT-TCCEEECCSSCCCC-C-GGGTTCTTCCEEEC
T ss_pred ccceeecccCCCCCCch--hhcCCcCCEEEccCCccCC-Ccc-hhcCC-CCCEEECCCCccCC-C-hhHhcCCCcCEEEc
Confidence 34555555555554333 4555555555555555552 332 43432 25555555555553 2 23455555555555
Q ss_pred cCCcCCCCCCccccccccccccccccccccccCCc
Q 006982 161 DHNRFSGQIPPQLGQLGRLKSFSVANNLLSGSIPT 195 (623)
Q Consensus 161 ~~N~~~g~iP~~l~~l~~L~~l~l~~N~l~g~ip~ 195 (623)
++|++++ + +.+..+++|+.|++++|.+++..|.
T Consensus 273 ~~n~l~~-~-~~~~~l~~L~~L~L~~n~l~~~~~~ 305 (347)
T 4fmz_A 273 GSNQISD-I-SVLNNLSQLNSLFLNNNQLGNEDME 305 (347)
T ss_dssp CSSCCCC-C-GGGGGCTTCSEEECCSSCCCGGGHH
T ss_pred cCCccCC-C-hhhcCCCCCCEEECcCCcCCCcChh
Confidence 5555553 2 2345555555555555555554443
No 378
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.08 E-value=8e-11 Score=122.19 Aligned_cols=123 Identities=14% Similarity=0.124 Sum_probs=80.2
Q ss_pred CCCcccceeecCCC--------CCcEEEEEecCCCceeeCCccccCCCCCCEEEcCCCCCCCCCChhH-hhhcCCCCEEE
Q 006982 65 FICKFTGVECWHPD--------ENRVLNLRLTDMGLKGQFPRGIRNCSSMTGLDLSSNKLYGPLPDDI-SKLVGFLTSLD 135 (623)
Q Consensus 65 ~~c~w~gv~c~~~~--------~~~v~~l~l~~~~l~g~~p~~l~~l~~L~~L~L~~N~l~g~ip~~~-~~l~~~L~~L~ 135 (623)
|.|.|..|.|++.. ...++.|+|++|+|+...+..|.+|++|++|+|++|.+.+.+|... .++.+.++.++
T Consensus 7 C~C~~~~v~C~~~~Lt~iP~~l~~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~ 86 (350)
T 4ay9_X 7 CHCSNRVFLCQESKVTEIPSDLPRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRI 86 (350)
T ss_dssp SEEETTEEEEESTTCCSCCTTCCTTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEE
T ss_pred cEeeCCEEEecCCCCCccCcCcCCCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhc
Confidence 55889999996532 1346677777777775444567777777777777777766666543 34433233466
Q ss_pred ccCccCCCCCCCCCCCCCCCceeeccCCcCCCCCCccccccccccccccccc
Q 006982 136 LSSNNFSGSIPSNLANCTYLNSLKLDHNRFSGQIPPQLGQLGRLKSFSVANN 187 (623)
Q Consensus 136 L~~N~l~g~ip~~~~~l~~L~~l~l~~N~~~g~iP~~l~~l~~L~~l~l~~N 187 (623)
++.|++++..|..|.++++|++|++++|++++..+..+....++..|++.+|
T Consensus 87 ~~~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~ 138 (350)
T 4ay9_X 87 EKANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDN 138 (350)
T ss_dssp EEETTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESC
T ss_pred ccCCcccccCchhhhhccccccccccccccccCCchhhcccchhhhhhhccc
Confidence 6677777555566777777777777777777555555555556666666553
No 379
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.07 E-value=1.3e-10 Score=124.96 Aligned_cols=58 Identities=28% Similarity=0.394 Sum_probs=31.2
Q ss_pred CCEEEccCccCCCCCCCCCCCCCCCceeeccCCcCCCCCCccccccccccccccccccccc--cCCcc
Q 006982 131 LTSLDLSSNNFSGSIPSNLANCTYLNSLKLDHNRFSGQIPPQLGQLGRLKSFSVANNLLSG--SIPTF 196 (623)
Q Consensus 131 L~~L~L~~N~l~g~ip~~~~~l~~L~~l~l~~N~~~g~iP~~l~~l~~L~~l~l~~N~l~g--~ip~~ 196 (623)
|+.|+|++|++++ +|.. +++|++|+|++|+++ .+|. .+++|+.|++++|+++| .+|..
T Consensus 319 L~~L~Ls~N~l~~-lp~~---~~~L~~L~L~~N~l~-~lp~---~l~~L~~L~L~~N~l~~l~~ip~~ 378 (454)
T 1jl5_A 319 LEELNVSNNKLIE-LPAL---PPRLERLIASFNHLA-EVPE---LPQNLKQLHVEYNPLREFPDIPES 378 (454)
T ss_dssp CCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCS-CCCC---CCTTCCEEECCSSCCSSCCCCCTT
T ss_pred CCEEECCCCcccc-cccc---CCcCCEEECCCCccc-cccc---hhhhccEEECCCCCCCcCCCChHH
Confidence 5555555555553 4433 355555555555555 3554 24555555555555555 45543
No 380
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=99.06 E-value=3.1e-10 Score=122.08 Aligned_cols=105 Identities=22% Similarity=0.231 Sum_probs=93.0
Q ss_pred CcEEEEEecCCCceeeCCccccCCCCCCEEEcCCCCCCCCCChhHhhhcCCCCEEEccCccCCCCCCCCCCCCCCCceee
Q 006982 80 NRVLNLRLTDMGLKGQFPRGIRNCSSMTGLDLSSNKLYGPLPDDISKLVGFLTSLDLSSNNFSGSIPSNLANCTYLNSLK 159 (623)
Q Consensus 80 ~~v~~l~l~~~~l~g~~p~~l~~l~~L~~L~L~~N~l~g~ip~~~~~l~~~L~~L~L~~N~l~g~ip~~~~~l~~L~~l~ 159 (623)
..+..|++++|...|.+ .++.+++|+.|+|++|++++ +| ++.+. +|+.|+|++|++++. .++.+++|+.|+
T Consensus 148 ~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~ls~n~l~~-l~--l~~l~-~L~~L~l~~N~l~~~---~l~~l~~L~~L~ 218 (457)
T 3bz5_A 148 TQLTELDCHLNKKITKL--DVTPQTQLTTLDCSFNKITE-LD--VSQNK-LLNRLNCDTNNITKL---DLNQNIQLTFLD 218 (457)
T ss_dssp TTCCEEECTTCSCCCCC--CCTTCTTCCEEECCSSCCCC-CC--CTTCT-TCCEEECCSSCCSCC---CCTTCTTCSEEE
T ss_pred CcCCEEECCCCCccccc--ccccCCcCCEEECCCCccce-ec--cccCC-CCCEEECcCCcCCee---ccccCCCCCEEE
Confidence 46889999999888888 48999999999999999996 77 66754 599999999999974 489999999999
Q ss_pred ccCCcCCCCCCccccccccccccccccccccccCCcc
Q 006982 160 LDHNRFSGQIPPQLGQLGRLKSFSVANNLLSGSIPTF 196 (623)
Q Consensus 160 l~~N~~~g~iP~~l~~l~~L~~l~l~~N~l~g~ip~~ 196 (623)
|++|++++ +| ++.+++|+.|++++|+++|..+..
T Consensus 219 Ls~N~l~~-ip--~~~l~~L~~L~l~~N~l~~~~~~~ 252 (457)
T 3bz5_A 219 CSSNKLTE-ID--VTPLTQLTYFDCSVNPLTELDVST 252 (457)
T ss_dssp CCSSCCSC-CC--CTTCTTCSEEECCSSCCSCCCCTT
T ss_pred CcCCcccc-cC--ccccCCCCEEEeeCCcCCCcCHHH
Confidence 99999998 77 889999999999999999976543
No 381
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=99.04 E-value=2.3e-10 Score=123.62 Aligned_cols=103 Identities=25% Similarity=0.394 Sum_probs=59.7
Q ss_pred cEEEEEecCCCceeeCCccccCCCCCCEEEcCCCCCCCCCChhHhhhcCCCCEEEccCccCCCCCCCCCCCCCCCceeec
Q 006982 81 RVLNLRLTDMGLKGQFPRGIRNCSSMTGLDLSSNKLYGPLPDDISKLVGFLTSLDLSSNNFSGSIPSNLANCTYLNSLKL 160 (623)
Q Consensus 81 ~v~~l~l~~~~l~g~~p~~l~~l~~L~~L~L~~N~l~g~ip~~~~~l~~~L~~L~L~~N~l~g~ip~~~~~l~~L~~l~l 160 (623)
++..|+|++|.+++..| +..+++|+.|+|++|.+++ +|+ +..+. +|+.|+|++|++++..| ++.+++|+.|+|
T Consensus 244 ~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~-~~~-~~~l~-~L~~L~L~~n~l~~~~~--~~~l~~L~~L~L 316 (466)
T 1o6v_A 244 NLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISN-ISP-LAGLT-ALTNLELNENQLEDISP--ISNLKNLTYLTL 316 (466)
T ss_dssp TCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCCC-CGG-GTTCT-TCSEEECCSSCCSCCGG--GGGCTTCSEEEC
T ss_pred CCCEEECCCCccccchh--hhcCCCCCEEECCCCccCc-ccc-ccCCC-ccCeEEcCCCcccCchh--hcCCCCCCEEEC
Confidence 46666677666665443 6666666666666666664 333 44433 36666666666664332 555666666666
Q ss_pred cCCcCCCCCCcccccccccccccccccccccc
Q 006982 161 DHNRFSGQIPPQLGQLGRLKSFSVANNLLSGS 192 (623)
Q Consensus 161 ~~N~~~g~iP~~l~~l~~L~~l~l~~N~l~g~ 192 (623)
++|++++..| +..+++|+.|++++|.+++.
T Consensus 317 ~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~ 346 (466)
T 1o6v_A 317 YFNNISDISP--VSSLTKLQRLFFYNNKVSDV 346 (466)
T ss_dssp CSSCCSCCGG--GGGCTTCCEEECCSSCCCCC
T ss_pred cCCcCCCchh--hccCccCCEeECCCCccCCc
Confidence 6666665443 45555666666666655553
No 382
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=99.01 E-value=2.3e-10 Score=118.37 Aligned_cols=124 Identities=23% Similarity=0.352 Sum_probs=102.2
Q ss_pred CcEEEEEecCCCceeeCCccccCCCCCCEEEcCCCCCCCCCChhHhhhcCCCCEEEccCccCCCCCCCCCCCCCCCceee
Q 006982 80 NRVLNLRLTDMGLKGQFPRGIRNCSSMTGLDLSSNKLYGPLPDDISKLVGFLTSLDLSSNNFSGSIPSNLANCTYLNSLK 159 (623)
Q Consensus 80 ~~v~~l~l~~~~l~g~~p~~l~~l~~L~~L~L~~N~l~g~ip~~~~~l~~~L~~L~L~~N~l~g~ip~~~~~l~~L~~l~ 159 (623)
.++..|+|++|.+++..+ +..+++|+.|+|++|.+++ + +.+..+. +|++|+|++|++++ +| .+..+++|+.|+
T Consensus 221 ~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~-~-~~~~~l~-~L~~L~l~~n~l~~-~~-~~~~l~~L~~L~ 293 (347)
T 4fmz_A 221 TRLNSLKIGNNKITDLSP--LANLSQLTWLEIGTNQISD-I-NAVKDLT-KLKMLNVGSNQISD-IS-VLNNLSQLNSLF 293 (347)
T ss_dssp TTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-C-GGGTTCT-TCCEEECCSSCCCC-CG-GGGGCTTCSEEE
T ss_pred CcCCEEEccCCccCCCcc--hhcCCCCCEEECCCCccCC-C-hhHhcCC-CcCEEEccCCccCC-Ch-hhcCCCCCCEEE
Confidence 468999999999987544 9999999999999999995 4 4577754 59999999999996 44 689999999999
Q ss_pred ccCCcCCCCCCccccccccccccccccccccccCCccccccccccccCCCC
Q 006982 160 LDHNRFSGQIPPQLGQLGRLKSFSVANNLLSGSIPTFVNLTLSADSVTNNQ 210 (623)
Q Consensus 160 l~~N~~~g~iP~~l~~l~~L~~l~l~~N~l~g~ip~~~~~~~~~~~~~~n~ 210 (623)
|++|++++..|..++.+++|+.|++++|.+++..|-..--++....+.+|+
T Consensus 294 L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~l~~L~~L~l~~N~ 344 (347)
T 4fmz_A 294 LNNNQLGNEDMEVIGGLTNLTTLFLSQNHITDIRPLASLSKMDSADFANQV 344 (347)
T ss_dssp CCSSCCCGGGHHHHHTCTTCSEEECCSSSCCCCGGGGGCTTCSEESSSCC-
T ss_pred CcCCcCCCcChhHhhccccCCEEEccCCccccccChhhhhccceeehhhhc
Confidence 999999998899999999999999999999998772111144455566554
No 383
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=99.00 E-value=5e-10 Score=120.90 Aligned_cols=121 Identities=28% Similarity=0.330 Sum_probs=94.7
Q ss_pred CcEEEEEecCCCceeeCCccccCCCCCCEEEcCCCCCCCCCChhHhhhcCCCCEEEccCccCCCCCCCCCCCCCCCceee
Q 006982 80 NRVLNLRLTDMGLKGQFPRGIRNCSSMTGLDLSSNKLYGPLPDDISKLVGFLTSLDLSSNNFSGSIPSNLANCTYLNSLK 159 (623)
Q Consensus 80 ~~v~~l~l~~~~l~g~~p~~l~~l~~L~~L~L~~N~l~g~ip~~~~~l~~~L~~L~L~~N~l~g~ip~~~~~l~~L~~l~ 159 (623)
..+..|+|++|.+++. +.+..+++|+.|+|++|.+++..| +..+. +|+.|+|++|++++. |. +..+++|+.|+
T Consensus 221 ~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~-~L~~L~l~~n~l~~~-~~-~~~l~~L~~L~ 293 (466)
T 1o6v_A 221 TNLDELSLNGNQLKDI--GTLASLTNLTDLDLANNQISNLAP--LSGLT-KLTELKLGANQISNI-SP-LAGLTALTNLE 293 (466)
T ss_dssp TTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTTCT-TCSEEECCSSCCCCC-GG-GTTCTTCSEEE
T ss_pred CCCCEEECCCCCcccc--hhhhcCCCCCEEECCCCccccchh--hhcCC-CCCEEECCCCccCcc-cc-ccCCCccCeEE
Confidence 4688999999998864 468899999999999999996544 66654 499999999999964 43 88999999999
Q ss_pred ccCCcCCCCCCccccccccccccccccccccccCCccccccccccccCCC
Q 006982 160 LDHNRFSGQIPPQLGQLGRLKSFSVANNLLSGSIPTFVNLTLSADSVTNN 209 (623)
Q Consensus 160 l~~N~~~g~iP~~l~~l~~L~~l~l~~N~l~g~ip~~~~~~~~~~~~~~n 209 (623)
|++|++++..| ++.+++|+.|++++|++++..|-..--.+....+.+|
T Consensus 294 L~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~~~~l~~L~~L~l~~n 341 (466)
T 1o6v_A 294 LNENQLEDISP--ISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNN 341 (466)
T ss_dssp CCSSCCSCCGG--GGGCTTCSEEECCSSCCSCCGGGGGCTTCCEEECCSS
T ss_pred cCCCcccCchh--hcCCCCCCEEECcCCcCCCchhhccCccCCEeECCCC
Confidence 99999997444 8899999999999999998876211113444445555
No 384
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.00 E-value=2.6e-10 Score=126.90 Aligned_cols=83 Identities=28% Similarity=0.303 Sum_probs=49.3
Q ss_pred CCCCEEEcCCCCCCCCCChhHhhhcCCCCEEEccCccCCCCCCCCCCCCCCCceeeccCCcCCCCCCccccccccccccc
Q 006982 104 SSMTGLDLSSNKLYGPLPDDISKLVGFLTSLDLSSNNFSGSIPSNLANCTYLNSLKLDHNRFSGQIPPQLGQLGRLKSFS 183 (623)
Q Consensus 104 ~~L~~L~L~~N~l~g~ip~~~~~l~~~L~~L~L~~N~l~g~ip~~~~~l~~L~~l~l~~N~~~g~iP~~l~~l~~L~~l~ 183 (623)
++|+.|+|++|+|++ +|. . .++|+.|+|++|+|+ .||. .+++|+.|+|++|+|+ .+|..++++++|+.|+
T Consensus 221 ~~L~~L~Ls~N~L~~-lp~---~-l~~L~~L~Ls~N~L~-~lp~---~~~~L~~L~Ls~N~L~-~lp~~l~~l~~L~~L~ 290 (622)
T 3g06_A 221 SGLKELIVSGNRLTS-LPV---L-PSELKELMVSGNRLT-SLPM---LPSGLLSLSVYRNQLT-RLPESLIHLSSETTVN 290 (622)
T ss_dssp TTCCEEECCSSCCSC-CCC---C-CTTCCEEECCSSCCS-CCCC---CCTTCCEEECCSSCCC-SCCGGGGGSCTTCEEE
T ss_pred CCCCEEEccCCccCc-CCC---C-CCcCcEEECCCCCCC-cCCc---ccccCcEEeCCCCCCC-cCCHHHhhccccCEEE
Confidence 445555555555553 442 1 123666666666666 4554 4556666666666666 5666666666666666
Q ss_pred cccccccccCCcc
Q 006982 184 VANNLLSGSIPTF 196 (623)
Q Consensus 184 l~~N~l~g~ip~~ 196 (623)
|++|.++|.+|..
T Consensus 291 L~~N~l~~~~~~~ 303 (622)
T 3g06_A 291 LEGNPLSERTLQA 303 (622)
T ss_dssp CCSCCCCHHHHHH
T ss_pred ecCCCCCCcCHHH
Confidence 6666666666653
No 385
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=98.98 E-value=2.1e-11 Score=128.29 Aligned_cols=130 Identities=16% Similarity=0.213 Sum_probs=103.6
Q ss_pred CcEEEEEecCCCce-eeCC---ccccCCCCCCEEEcCCCCCC--C---CCChhHhhhcCCCCEEEccCccCC----CCCC
Q 006982 80 NRVLNLRLTDMGLK-GQFP---RGIRNCSSMTGLDLSSNKLY--G---PLPDDISKLVGFLTSLDLSSNNFS----GSIP 146 (623)
Q Consensus 80 ~~v~~l~l~~~~l~-g~~p---~~l~~l~~L~~L~L~~N~l~--g---~ip~~~~~l~~~L~~L~L~~N~l~----g~ip 146 (623)
.++..|+|++|.++ +.+| ..+..+++|+.|+|++|.++ | .+|..+..+. +|+.|+|++|.++ +.+|
T Consensus 159 ~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~-~L~~L~Ls~n~l~~~g~~~l~ 237 (386)
T 2ca6_A 159 PPLRSIICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQ-ELKVLDLQDNTFTHLGSSALA 237 (386)
T ss_dssp CCCCEEECCSSCCTGGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCT-TCCEEECCSSCCHHHHHHHHH
T ss_pred CCCcEEECCCCCCCcHHHHHHHHHHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCC-CccEEECcCCCCCcHHHHHHH
Confidence 47899999999997 5555 56788999999999999998 3 3444666754 4999999999996 6788
Q ss_pred CCCCCCCCCceeeccCCcCCCC----CCccc--cccccccccccccccccc----cCCccc-c--ccccccccCCCC
Q 006982 147 SNLANCTYLNSLKLDHNRFSGQ----IPPQL--GQLGRLKSFSVANNLLSG----SIPTFV-N--LTLSADSVTNNQ 210 (623)
Q Consensus 147 ~~~~~l~~L~~l~l~~N~~~g~----iP~~l--~~l~~L~~l~l~~N~l~g----~ip~~~-~--~~~~~~~~~~n~ 210 (623)
..+..+++|++|+|++|++++. +|..+ +.+++|+.|+|++|.+++ .+|..+ . -++....+.+|.
T Consensus 238 ~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~N~ 314 (386)
T 2ca6_A 238 IALKSWPNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNR 314 (386)
T ss_dssp HHGGGCTTCCEEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSB
T ss_pred HHHccCCCcCEEECCCCCCchhhHHHHHHHHhhccCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCceEEEccCCc
Confidence 8899999999999999999976 67776 448999999999999998 577654 1 134455566664
No 386
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=98.97 E-value=1.6e-09 Score=112.63 Aligned_cols=141 Identities=13% Similarity=0.189 Sum_probs=105.8
Q ss_pred cceeeccCccEEEEEEeCCCcEEEEEEec--ccc--ccHHHHHHHHHHhCCCC--CCCCcceeEEEEeC---CeeeEEEe
Q 006982 310 NNIIGSGRTGTMYKALLEDGTSLMVKRLQ--DSQ--RSEKEFVAEMATLGSVK--NRNLVPLLGFCMAK---KERLLVYK 380 (623)
Q Consensus 310 ~~~lG~G~~g~Vy~~~~~~~~~vavK~~~--~~~--~~~~~~~~e~~~l~~l~--h~niv~l~~~~~~~---~~~~lV~e 380 (623)
.+.++.|.++.||+....+ ..+++|+.. ... .....+.+|.+++..+. +..+.++++++.+. +..++|||
T Consensus 43 ~~~l~~G~sn~~y~v~~~~-~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~vme 121 (359)
T 3dxp_A 43 VEQFKGGQSNPTFKLVTPG-QTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYIME 121 (359)
T ss_dssp EEECCC-CCSCEEEEECSS-CEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEEEE
T ss_pred EEEcCCcccceEEEEEECC-ceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEEEE
Confidence 5678999999999998765 577888776 332 22446778998888886 45678888888766 34789999
Q ss_pred cCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcC------------------------------------
Q 006982 381 HMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNC------------------------------------ 424 (623)
Q Consensus 381 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~------------------------------------ 424 (623)
|++|..+.+.. ...++...+..++.++++.|+.||+..
T Consensus 122 ~v~G~~l~~~~------~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (359)
T 3dxp_A 122 FVSGRVLWDQS------LPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETESIP 195 (359)
T ss_dssp CCCCBCCCCTT------CTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSCCH
T ss_pred ecCCeecCCCc------cccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCcCCh
Confidence 99998775422 134677888899999999999999731
Q ss_pred -------------------CCCcEecCCCCCceeeCCCCC--eEEeeccccccc
Q 006982 425 -------------------NPRIIHRNISSKCILLDDDFE--PKISDFGLARLM 457 (623)
Q Consensus 425 -------------------~~~i~H~dlk~~NILl~~~~~--~kl~Dfgla~~~ 457 (623)
.+.++|+|+++.||++++++. +.|.||+.+..-
T Consensus 196 ~~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~g 249 (359)
T 3dxp_A 196 AMDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTLG 249 (359)
T ss_dssp HHHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEEE
T ss_pred HHHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECccccccC
Confidence 246999999999999997753 689999998753
No 387
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=98.93 E-value=4.2e-11 Score=123.34 Aligned_cols=114 Identities=20% Similarity=0.394 Sum_probs=80.3
Q ss_pred CcEEEEEecCCCceee-CCccccCCCCCCEEEcCCCCCCCCCChhHhhhcCCCCEEEccCc-cCCC-CCCCCCCCCCCCc
Q 006982 80 NRVLNLRLTDMGLKGQ-FPRGIRNCSSMTGLDLSSNKLYGPLPDDISKLVGFLTSLDLSSN-NFSG-SIPSNLANCTYLN 156 (623)
Q Consensus 80 ~~v~~l~l~~~~l~g~-~p~~l~~l~~L~~L~L~~N~l~g~ip~~~~~l~~~L~~L~L~~N-~l~g-~ip~~~~~l~~L~ 156 (623)
.+++.|+|++|.+++. +|..+..+++|++|+|++|.+++.+|..++.+ ++|++|+|++| .+++ .+|..+.++++|+
T Consensus 93 ~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~-~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~ 171 (336)
T 2ast_B 93 FRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKN-SNLVRLNLSGCSGFSEFALQTLLSSCSRLD 171 (336)
T ss_dssp BCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTC-TTCSEEECTTCBSCCHHHHHHHHHHCTTCC
T ss_pred CCCCEEEccCCCcCHHHHHHHHhhCCCCCEEeCcCcccCHHHHHHHhcC-CCCCEEECCCCCCCCHHHHHHHHhcCCCCC
Confidence 4577788888877765 77777777888888888887777777777775 34788888777 5665 2565666777777
Q ss_pred eeeccCC-cCCCC-CCccccccc-cccccccccc--ccc-ccCC
Q 006982 157 SLKLDHN-RFSGQ-IPPQLGQLG-RLKSFSVANN--LLS-GSIP 194 (623)
Q Consensus 157 ~l~l~~N-~~~g~-iP~~l~~l~-~L~~l~l~~N--~l~-g~ip 194 (623)
+|+|++| ++++. +|..+..++ +|+.|++++| .++ +.+|
T Consensus 172 ~L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l~~~~~~~~~~~l~ 215 (336)
T 2ast_B 172 ELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLS 215 (336)
T ss_dssp EEECCCCTTCCHHHHHHHHHHSCTTCCEEECCSCGGGSCHHHHH
T ss_pred EEcCCCCCCcChHHHHHHHHhcccCCCEEEeCCCcccCCHHHHH
Confidence 7777777 77654 566667777 7777777777 444 3444
No 388
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=98.92 E-value=6.7e-11 Score=121.76 Aligned_cols=109 Identities=20% Similarity=0.191 Sum_probs=71.1
Q ss_pred cEEEEEecCCCceeeCCccccCCCCCCEEEcCCCCCCCC-CChhHhhhcCCCCEEEccCccCCCCCCCCCCCCCCCceee
Q 006982 81 RVLNLRLTDMGLKGQFPRGIRNCSSMTGLDLSSNKLYGP-LPDDISKLVGFLTSLDLSSNNFSGSIPSNLANCTYLNSLK 159 (623)
Q Consensus 81 ~v~~l~l~~~~l~g~~p~~l~~l~~L~~L~L~~N~l~g~-ip~~~~~l~~~L~~L~L~~N~l~g~ip~~~~~l~~L~~l~ 159 (623)
++..|++++|.+.+.++. +.++++|+.|+|++|.+++. +|..+..+. +|++|+|++|++++.+|..++++++|++|+
T Consensus 71 ~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~-~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~ 148 (336)
T 2ast_B 71 GVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVSTLHGILSQCS-KLQNLSLEGLRLSDPIVNTLAKNSNLVRLN 148 (336)
T ss_dssp TCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHHHHHHHHTTBC-CCSEEECTTCBCCHHHHHHHTTCTTCSEEE
T ss_pred cceEEEcCCccccccchh-hccCCCCCEEEccCCCcCHHHHHHHHhhCC-CCCEEeCcCcccCHHHHHHHhcCCCCCEEE
Confidence 456666666666665544 45667777777777776654 665555543 477777777777666666666677777777
Q ss_pred ccCC-cCCC-CCCccccccccccccccccc-cccc
Q 006982 160 LDHN-RFSG-QIPPQLGQLGRLKSFSVANN-LLSG 191 (623)
Q Consensus 160 l~~N-~~~g-~iP~~l~~l~~L~~l~l~~N-~l~g 191 (623)
|++| .+++ .+|..+.++++|+.|++++| .+++
T Consensus 149 L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~ 183 (336)
T 2ast_B 149 LSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTE 183 (336)
T ss_dssp CTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCH
T ss_pred CCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcCh
Confidence 7777 5664 25656666777777777777 6665
No 389
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=98.92 E-value=2.7e-11 Score=127.47 Aligned_cols=110 Identities=19% Similarity=0.261 Sum_probs=55.8
Q ss_pred cEEEEEecCCCcee----eCCccccCCCCCCEEEcCCCCCCCCCChhHhhhc------------CCCCEEEccCccCC-C
Q 006982 81 RVLNLRLTDMGLKG----QFPRGIRNCSSMTGLDLSSNKLYGPLPDDISKLV------------GFLTSLDLSSNNFS-G 143 (623)
Q Consensus 81 ~v~~l~l~~~~l~g----~~p~~l~~l~~L~~L~L~~N~l~g~ip~~~~~l~------------~~L~~L~L~~N~l~-g 143 (623)
+++.|+|++|.+++ .+|..+.++++|++|+|++|.+++..+..+.... ++|++|+|++|+++ +
T Consensus 95 ~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~~ 174 (386)
T 2ca6_A 95 KLHTVRLSDNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENG 174 (386)
T ss_dssp TCCEEECCSCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGG
T ss_pred cccEEECCCCcCCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCCCCcH
Confidence 45555555555555 3555555555555555555555433222222211 23555555555555 3
Q ss_pred CCC---CCCCCCCCCceeeccCCcCC--C---CCCcccccccccccccccccccc
Q 006982 144 SIP---SNLANCTYLNSLKLDHNRFS--G---QIPPQLGQLGRLKSFSVANNLLS 190 (623)
Q Consensus 144 ~ip---~~~~~l~~L~~l~l~~N~~~--g---~iP~~l~~l~~L~~l~l~~N~l~ 190 (623)
.+| ..+..+++|++|+|++|+++ | .+|..+..+++|+.|+|++|.++
T Consensus 175 ~~~~l~~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~ 229 (386)
T 2ca6_A 175 SMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFT 229 (386)
T ss_dssp GHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCH
T ss_pred HHHHHHHHHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCC
Confidence 334 23445555555555555555 2 23334555555555666555554
No 390
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=98.91 E-value=1.2e-10 Score=121.51 Aligned_cols=113 Identities=27% Similarity=0.261 Sum_probs=77.8
Q ss_pred cEEEEEecCCCceeeCC----ccccCCC-CCCEEEcCCCCCCCCCChhHhhh----cCCCCEEEccCccCCCCCCCCCCC
Q 006982 81 RVLNLRLTDMGLKGQFP----RGIRNCS-SMTGLDLSSNKLYGPLPDDISKL----VGFLTSLDLSSNNFSGSIPSNLAN 151 (623)
Q Consensus 81 ~v~~l~l~~~~l~g~~p----~~l~~l~-~L~~L~L~~N~l~g~ip~~~~~l----~~~L~~L~L~~N~l~g~ip~~~~~ 151 (623)
.++.|+|++|.+++..+ ..+.+++ +|+.|+|++|.+++..+..+..+ .++|++|+|++|++++..+..++.
T Consensus 23 ~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~l~~ 102 (362)
T 3goz_A 23 GVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPANVTSLNLSGNFLSYKSSDELVK 102 (362)
T ss_dssp TCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHH
T ss_pred CceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCCccEEECcCCcCChHHHHHHHH
Confidence 47778888887776655 5666777 78888888888777667666664 134788888888877665554333
Q ss_pred ----C-CCCceeeccCCcCCCCCCccccc-----cccccccccccccccccC
Q 006982 152 ----C-TYLNSLKLDHNRFSGQIPPQLGQ-----LGRLKSFSVANNLLSGSI 193 (623)
Q Consensus 152 ----l-~~L~~l~l~~N~~~g~iP~~l~~-----l~~L~~l~l~~N~l~g~i 193 (623)
+ ++|++|+|++|++++..+..++. .++|+.|+|++|.+++.-
T Consensus 103 ~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~ 154 (362)
T 3goz_A 103 TLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKS 154 (362)
T ss_dssp HHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSC
T ss_pred HHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHH
Confidence 3 67888888888877655555443 257778888888777543
No 391
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=98.86 E-value=2.8e-10 Score=118.62 Aligned_cols=114 Identities=25% Similarity=0.257 Sum_probs=60.2
Q ss_pred cEEEEEecCCCceeeCCccccCC-----CCCCEEEcCCCCCCCCCChhHhhhc----CCCCEEEccCccCCCCCCCCCC-
Q 006982 81 RVLNLRLTDMGLKGQFPRGIRNC-----SSMTGLDLSSNKLYGPLPDDISKLV----GFLTSLDLSSNNFSGSIPSNLA- 150 (623)
Q Consensus 81 ~v~~l~l~~~~l~g~~p~~l~~l-----~~L~~L~L~~N~l~g~ip~~~~~l~----~~L~~L~L~~N~l~g~ip~~~~- 150 (623)
+++.|+|++|.+++..+..+..+ ++|+.|+|++|.+++..+..++... ++|+.|+|++|++++..+..++
T Consensus 52 ~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~ 131 (362)
T 3goz_A 52 SVTSLNLSGNSLGFKNSDELVQILAAIPANVTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQ 131 (362)
T ss_dssp TCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHH
T ss_pred ceeEEECcCCCCCHHHHHHHHHHHhccCCCccEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHH
Confidence 45666666666665555544443 5666666666666655555444421 2366666666666544333322
Q ss_pred ---C-CCCCceeeccCCcCCCCCCc----cccccc-cccccccccccccccCC
Q 006982 151 ---N-CTYLNSLKLDHNRFSGQIPP----QLGQLG-RLKSFSVANNLLSGSIP 194 (623)
Q Consensus 151 ---~-l~~L~~l~l~~N~~~g~iP~----~l~~l~-~L~~l~l~~N~l~g~ip 194 (623)
. .++|++|+|++|++++.-+. .+..++ +|+.|+|++|++++..+
T Consensus 132 ~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~ 184 (362)
T 3goz_A 132 AFSNLPASITSLNLRGNDLGIKSSDELIQILAAIPANVNSLNLRGNNLASKNC 184 (362)
T ss_dssp HHTTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCH
T ss_pred HHHhCCCceeEEEccCCcCCHHHHHHHHHHHhcCCccccEeeecCCCCchhhH
Confidence 2 24666666666666643222 223333 56666666666655444
No 392
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.83 E-value=1.3e-10 Score=114.75 Aligned_cols=125 Identities=15% Similarity=0.216 Sum_probs=84.6
Q ss_pred CCcccceeecCCCCCcEEEEEecC---CCceeeCCcc------------------------ccCCCCCCE--EEcCCCCC
Q 006982 66 ICKFTGVECWHPDENRVLNLRLTD---MGLKGQFPRG------------------------IRNCSSMTG--LDLSSNKL 116 (623)
Q Consensus 66 ~c~w~gv~c~~~~~~~v~~l~l~~---~~l~g~~p~~------------------------l~~l~~L~~--L~L~~N~l 116 (623)
.|+|.|+.|+. ...+|+.+...+ ..+.|.++++ +...+.|.. ++++.|..
T Consensus 77 l~~~~g~i~~~-~~~ki~~~v~~~~~~~~~~~~l~~~~~~~Lk~~l~~ryn~~~~~LdLs~l~~dp~L~~~~l~l~~N~~ 155 (267)
T 3rw6_A 77 LKAVNYKILDR-ENRRISIIINSSAPPHTILNELKPEQVEQLKLIMSKRYDGSQQALDLKGLRSDPDLVAQNIDVVLNRR 155 (267)
T ss_dssp HHHTTSSCBCT-TSCBCCCEEEECCCCHHHHTSCCHHHHHHHHHHHHHTEETTTTEEECTTGGGCHHHHHTTCCCCTTSH
T ss_pred HHhcCcEEECC-CCCEEEEEEecCCCcccccccCCHHHHHHHHHHHHhccchhccccCHHHcCCCcchhhcCccccCCHH
Confidence 68899999964 334666555544 3344444421 222223333 45566643
Q ss_pred CCCCChhH----hhhcCCCCEEEccCccCCC--CCCCCCCCCCCCceeeccCCcCCCCCCccccccc--ccccccccccc
Q 006982 117 YGPLPDDI----SKLVGFLTSLDLSSNNFSG--SIPSNLANCTYLNSLKLDHNRFSGQIPPQLGQLG--RLKSFSVANNL 188 (623)
Q Consensus 117 ~g~ip~~~----~~l~~~L~~L~L~~N~l~g--~ip~~~~~l~~L~~l~l~~N~~~g~iP~~l~~l~--~L~~l~l~~N~ 188 (623)
. .++..+ .+ .++|+.|+|++|+|++ .+|..+..+++|+.|+|++|+|++. ..+..+. +|+.|+|++|.
T Consensus 156 ~-~~~~~l~i~~~~-l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L~L~~Np 231 (267)
T 3rw6_A 156 S-CMAATLRIIEEN-IPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEELWLDGNS 231 (267)
T ss_dssp H-HHHHHHHHHHHH-CTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSEEECTTST
T ss_pred H-HHHHHHHHHHhh-CCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcceEEccCCc
Confidence 2 333222 23 3459999999999998 6677778899999999999999964 4566666 89999999999
Q ss_pred ccccCCc
Q 006982 189 LSGSIPT 195 (623)
Q Consensus 189 l~g~ip~ 195 (623)
+++.+|.
T Consensus 232 l~~~~~~ 238 (267)
T 3rw6_A 232 LCDTFRD 238 (267)
T ss_dssp TGGGCSS
T ss_pred CccccCc
Confidence 9998874
No 393
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=98.78 E-value=2.1e-09 Score=109.07 Aligned_cols=188 Identities=21% Similarity=0.252 Sum_probs=119.6
Q ss_pred cceeeccCccEEEEEEeCCCcEEEEEEeccccccHHHHHHHHHHhCCCC-CCC--CcceeEEEEeCC---eeeEEEecCC
Q 006982 310 NNIIGSGRTGTMYKALLEDGTSLMVKRLQDSQRSEKEFVAEMATLGSVK-NRN--LVPLLGFCMAKK---ERLLVYKHMP 383 (623)
Q Consensus 310 ~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~-h~n--iv~l~~~~~~~~---~~~lV~e~~~ 383 (623)
.+.++.|....||+.. ..+++|+.... .....+.+|.++++.+. +.. +.+++.+....+ ..|+||++++
T Consensus 25 i~~~~~G~~n~v~~v~----~~~vlR~~~~~-~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~~i~ 99 (304)
T 3sg8_A 25 IEISGEGNDCIAYEIN----RDFIFKFPKHS-RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFTKIK 99 (304)
T ss_dssp CCEEEECSSEEEEEST----TSEEEEEESSH-HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEECCC
T ss_pred eEecCCCCcceEEEEC----CEEEEEecCCc-chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEEcccC
Confidence 3568999999999863 45788876433 33467888999987773 332 334444433332 3478999999
Q ss_pred CCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhc----------------------------------------
Q 006982 384 NGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHN---------------------------------------- 423 (623)
Q Consensus 384 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~---------------------------------------- 423 (623)
|.++.+... ..++..++..++.++++.++.||+.
T Consensus 100 G~~l~~~~~------~~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 173 (304)
T 3sg8_A 100 GVPLTPLLL------NNLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQMKKV 173 (304)
T ss_dssp CEECCHHHH------HTSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHHHHH
T ss_pred CeECCcccc------ccCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccHHHH
Confidence 988865331 2356667778888888888888861
Q ss_pred ---------------CCCCcEecCCCCCceeeCC--CCCeEEeecccccccCCCCCcccccccC--CCC---------cc
Q 006982 424 ---------------CNPRIIHRNISSKCILLDD--DFEPKISDFGLARLMNPIDTHLSTFVNG--EFG---------DL 475 (623)
Q Consensus 424 ---------------~~~~i~H~dlk~~NILl~~--~~~~kl~Dfgla~~~~~~~~~~~~~~~~--~~g---------t~ 475 (623)
..+.++|+|++|.||++++ +..+.|+||+.+..-.+.. ........ ..+ .+
T Consensus 174 ~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~~-Dl~~~~~~~~~~~~~~~~~~l~~Y 252 (304)
T 3sg8_A 174 DDFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDN-DFISLMEDDEEYGMEFVSKILNHY 252 (304)
T ss_dssp HHHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECTTH-HHHTTCCTTTSCCHHHHHHHHHHH
T ss_pred HHHHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChHH-HHHHHHhhccccCHHHHHHHHHHc
Confidence 1245899999999999998 5668899999987643311 00000000 000 01
Q ss_pred cccC-cccccCCCCCcchhHHHHHHHHHHHHhCCCCC
Q 006982 476 GYVA-PEYARTLVATPKGDVYSFGTVLLELVTGERPT 511 (623)
Q Consensus 476 ~y~a-PE~~~~~~~s~k~DV~sfGvil~elltg~~P~ 511 (623)
+... |+.... .....+.|++|.++|++.+|..+|
T Consensus 253 ~~~~~~~~~~r--~~~~~~~~~l~~~~~~~~~g~~~~ 287 (304)
T 3sg8_A 253 KHKDIPTVLEK--YRMKEKYWSFEKIIYGKEYGYMDW 287 (304)
T ss_dssp TCSCHHHHHHH--HHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred CCCCcHHHHHH--HHHHHHHHHHHHHHHHHHcCCHHH
Confidence 1111 222111 112368999999999999998765
No 394
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=98.71 E-value=2.2e-08 Score=103.66 Aligned_cols=108 Identities=16% Similarity=0.037 Sum_probs=67.1
Q ss_pred EEEecCCCceeeCCccccCCCCCCEEEcCCCCCCCCCChhHh-------------------------hhcCCCCEEEccC
Q 006982 84 NLRLTDMGLKGQFPRGIRNCSSMTGLDLSSNKLYGPLPDDIS-------------------------KLVGFLTSLDLSS 138 (623)
Q Consensus 84 ~l~l~~~~l~g~~p~~l~~l~~L~~L~L~~N~l~g~ip~~~~-------------------------~l~~~L~~L~L~~ 138 (623)
.+.+.+|+++...|..+..+++|++|++++|++.+..+..+. .+...|+.|+|++
T Consensus 84 ~l~~~~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~~~~l~~L~L~~ 163 (350)
T 4ay9_X 84 IRIEKANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNK 163 (350)
T ss_dssp EEEEEETTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCS
T ss_pred hhcccCCcccccCchhhhhccccccccccccccccCCchhhcccchhhhhhhccccccccccccchhhcchhhhhhcccc
Confidence 344555666655566677777777777777777643222111 1122366677777
Q ss_pred ccCCCCCCCCCCCCCCCceeeccCCcCCCCCCc-ccccccccccccccccccccc
Q 006982 139 NNFSGSIPSNLANCTYLNSLKLDHNRFSGQIPP-QLGQLGRLKSFSVANNLLSGS 192 (623)
Q Consensus 139 N~l~g~ip~~~~~l~~L~~l~l~~N~~~g~iP~-~l~~l~~L~~l~l~~N~l~g~ 192 (623)
|+|+ .||......++|+.|++++|+..+.||. .+..+++|+.|+|++|+|+.-
T Consensus 164 N~i~-~i~~~~f~~~~L~~l~l~~~n~l~~i~~~~f~~l~~L~~LdLs~N~l~~l 217 (350)
T 4ay9_X 164 NGIQ-EIHNSAFNGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIHSL 217 (350)
T ss_dssp SCCC-EECTTSSTTEEEEEEECTTCTTCCCCCTTTTTTEECCSEEECTTSCCCCC
T ss_pred cccc-CCChhhccccchhHHhhccCCcccCCCHHHhccCcccchhhcCCCCcCcc
Confidence 7777 5666666666777777765444446664 457777777777777777743
No 395
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=98.63 E-value=4.5e-10 Score=120.88 Aligned_cols=113 Identities=19% Similarity=0.134 Sum_probs=68.7
Q ss_pred CcEEEEEecCCCceeeC-----CccccCCCCCCEEEcCCCCCCCC----CChhHhhhcCCCCEEEccCccCCCCCCCCCC
Q 006982 80 NRVLNLRLTDMGLKGQF-----PRGIRNCSSMTGLDLSSNKLYGP----LPDDISKLVGFLTSLDLSSNNFSGSIPSNLA 150 (623)
Q Consensus 80 ~~v~~l~l~~~~l~g~~-----p~~l~~l~~L~~L~L~~N~l~g~----ip~~~~~l~~~L~~L~L~~N~l~g~ip~~~~ 150 (623)
..++.|+|++|.+++.- +..+..+++|+.|+|++|.+++. +|..+..+. +|++|+|++|.+++..+..+.
T Consensus 227 ~~L~~L~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~-~L~~L~Ls~n~i~~~~~~~l~ 305 (461)
T 1z7x_W 227 ASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKE-SLKELSLAGNELGDEGARLLC 305 (461)
T ss_dssp TTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCT-TCCEEECTTCCCHHHHHHHHH
T ss_pred CCccEEeccCCcCChHHHHHHHHHHhcCCCCceEEECcCCCCCHHHHHHHHHHHhhCC-CcceEECCCCCCchHHHHHHH
Confidence 35667777777766532 12223567777777777777643 555555543 377777777776643333332
Q ss_pred C-----CCCCceeeccCCcCCCC----CCccccccccccccccccccccccC
Q 006982 151 N-----CTYLNSLKLDHNRFSGQ----IPPQLGQLGRLKSFSVANNLLSGSI 193 (623)
Q Consensus 151 ~-----l~~L~~l~l~~N~~~g~----iP~~l~~l~~L~~l~l~~N~l~g~i 193 (623)
. .++|++|+|++|++++. +|..+..+++|+.|++++|.+++..
T Consensus 306 ~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~ 357 (461)
T 1z7x_W 306 ETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAG 357 (461)
T ss_dssp HHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHH
T ss_pred HHhccCCccceeeEcCCCCCchHHHHHHHHHHhhCCCccEEEccCCcccccc
Confidence 2 25677777777777654 4555666677777777777766543
No 396
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.57 E-value=3.6e-08 Score=97.18 Aligned_cols=80 Identities=25% Similarity=0.345 Sum_probs=66.4
Q ss_pred cCCCCCCEEEcCCCCCCC--CCChhHhhhcCCCCEEEccCccCCCCCCCCCCCCC--CCceeeccCCcCCCCCCc-----
Q 006982 101 RNCSSMTGLDLSSNKLYG--PLPDDISKLVGFLTSLDLSSNNFSGSIPSNLANCT--YLNSLKLDHNRFSGQIPP----- 171 (623)
Q Consensus 101 ~~l~~L~~L~L~~N~l~g--~ip~~~~~l~~~L~~L~L~~N~l~g~ip~~~~~l~--~L~~l~l~~N~~~g~iP~----- 171 (623)
.++++|+.|+|++|+|++ .+|..+..+. +|+.|+|++|+|++. .++..++ +|+.|+|++|.+++.+|.
T Consensus 167 ~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~-~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L~L~~Npl~~~~~~~~~y~ 243 (267)
T 3rw6_A 167 ENIPELLSLNLSNNRLYRLDDMSSIVQKAP-NLKILNLSGNELKSE--RELDKIKGLKLEELWLDGNSLCDTFRDQSTYI 243 (267)
T ss_dssp HHCTTCCEEECTTSCCCCCGGGTTHHHHST-TCCEEECTTSCCCSG--GGGGGGTTSCCSEEECTTSTTGGGCSSHHHHH
T ss_pred hhCCCCCEEECCCCCCCCCccchhHHhhCC-CCCEEECCCCccCCc--hhhhhcccCCcceEEccCCcCccccCcchhHH
Confidence 568999999999999998 6677777764 599999999999964 4455555 999999999999998884
Q ss_pred --cccccccccccc
Q 006982 172 --QLGQLGRLKSFS 183 (623)
Q Consensus 172 --~l~~l~~L~~l~ 183 (623)
.+..+++|+.||
T Consensus 244 ~~il~~~P~L~~LD 257 (267)
T 3rw6_A 244 SAIRERFPKLLRLD 257 (267)
T ss_dssp HHHHHHCTTCCEES
T ss_pred HHHHHHCcccCeEC
Confidence 366788888765
No 397
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=98.55 E-value=1.5e-09 Score=116.73 Aligned_cols=131 Identities=24% Similarity=0.258 Sum_probs=102.3
Q ss_pred CcEEEEEecCCCceee----CCccccCCCCCCEEEcCCCCCCCCCChhHhhhc----CCCCEEEccCccCCCC----CCC
Q 006982 80 NRVLNLRLTDMGLKGQ----FPRGIRNCSSMTGLDLSSNKLYGPLPDDISKLV----GFLTSLDLSSNNFSGS----IPS 147 (623)
Q Consensus 80 ~~v~~l~l~~~~l~g~----~p~~l~~l~~L~~L~L~~N~l~g~ip~~~~~l~----~~L~~L~L~~N~l~g~----ip~ 147 (623)
.++..|+|++|++++. ++..+.++++|+.|+|++|.+++..+..+.... ++|+.|+|++|.+++. +|.
T Consensus 256 ~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~ 335 (461)
T 1z7x_W 256 SRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSS 335 (461)
T ss_dssp CCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHH
T ss_pred CCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCchHHHHHHHHHhccCCccceeeEcCCCCCchHHHHHHHH
Confidence 5789999999999875 788888899999999999999865555555432 3599999999999976 566
Q ss_pred CCCCCCCCceeeccCCcCCCCCCccccc-----cccccccccccccccc----cCCcccc--ccccccccCCCC
Q 006982 148 NLANCTYLNSLKLDHNRFSGQIPPQLGQ-----LGRLKSFSVANNLLSG----SIPTFVN--LTLSADSVTNNQ 210 (623)
Q Consensus 148 ~~~~l~~L~~l~l~~N~~~g~iP~~l~~-----l~~L~~l~l~~N~l~g----~ip~~~~--~~~~~~~~~~n~ 210 (623)
.+..+++|++|+|++|++++..+..+.. .++|+.|++++|.+++ .+|..+. -++....+.+|.
T Consensus 336 ~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~l~~N~ 409 (461)
T 1z7x_W 336 VLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNC 409 (461)
T ss_dssp HHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCCCCCEEECCSSS
T ss_pred HHhhCCCccEEEccCCccccccHHHHHHHHcCCCCceEEEECCCCCCChhhHHHHHHHHHhCCCccEEECCCCC
Confidence 7778899999999999998766666654 6799999999999986 6665432 134445555553
No 398
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=98.52 E-value=3.7e-07 Score=93.13 Aligned_cols=138 Identities=13% Similarity=0.143 Sum_probs=99.7
Q ss_pred cCcccceeeccCccEEEEEEeCCCcEEEEEEeccccccHHHHHHHHHHhCCCCC---C-CCcceeEEEEeCCeeeEEEec
Q 006982 306 SFSKNNIIGSGRTGTMYKALLEDGTSLMVKRLQDSQRSEKEFVAEMATLGSVKN---R-NLVPLLGFCMAKKERLLVYKH 381 (623)
Q Consensus 306 ~f~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~h---~-niv~l~~~~~~~~~~~lV~e~ 381 (623)
.....+.++.|....||+. +..+++|+..... ....+..|.+++..+.+ + .+.+++++ +..++||||
T Consensus 38 ~i~~v~~l~~G~~n~vy~v----g~~~vlR~~~~~~-~~~~~~~E~~~L~~L~~~~~~~~vP~v~~~----~~~~lvme~ 108 (320)
T 3r70_A 38 KINELRYLSSGDDSDTFLC----NEQYVVKVPKRDS-VRISQKRELELYRFLENCKLSYQIPAVVYQ----SDRFNIMKY 108 (320)
T ss_dssp CCSCEEEEEECSSEEEEEE----TTTEEEEEESSHH-HHHHHHHHHHHHHHHTTSCCSSBCCCEEEE----CSSCEEEEC
T ss_pred ceEEEEeCCCCCCceEEEE----CCEEEEEeCCcHH-HHHHHHHHHHHHHHHHhcCCCCCcceEEec----CCcEEEEee
Confidence 4556678999999999998 6677888764332 23457889888777755 2 23444444 567899999
Q ss_pred CCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCC------------------------------------
Q 006982 382 MPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCN------------------------------------ 425 (623)
Q Consensus 382 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~------------------------------------ 425 (623)
++|.++.+... ..++..++..++.++++.++.||+...
T Consensus 109 i~G~~l~~~~~------~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (320)
T 3r70_A 109 IKGERITYEQY------HKLSEKEKDALAYDEATFLKELHSIEIDCSVSLFSDALVNKKDKFLQDKKLLISILEKEQLLT 182 (320)
T ss_dssp CCCBCCCHHHH------TTSCHHHHHHHHHHHHHHHHHHHHSCCCTTSHHHHTTBCCHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred cCCcccccccc------ccCCHHHHHHHHHHHHHHHHHHhCCCcccCCCccccccccchHHHHHHHHHHHHHHhhccccc
Confidence 99988864321 234566667778888888888885421
Q ss_pred ------------------------CCcEecCCCCCceeeCCCCCeEEeecccccccC
Q 006982 426 ------------------------PRIIHRNISSKCILLDDDFEPKISDFGLARLMN 458 (623)
Q Consensus 426 ------------------------~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~ 458 (623)
+.++|+|++|.||+++++..+.|+||+.+..-.
T Consensus 183 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~H~D~~~~N~l~~~~~~~~~iD~~~~~~~~ 239 (320)
T 3r70_A 183 DEMLEHIETIYENILSNAVLFKYTPCLVHNDFSANNMIFRNNRLFGVIDFGDFNVGD 239 (320)
T ss_dssp HHHHHHHHHHHHHHHTCGGGTCCCCEEECSCCSGGGEEEETTEEEEECCCTTCEEEC
T ss_pred ccchHHHHHHHHHHHhccccccCCceeeECCCCCCcEEEECCceEEEECCcccccCC
Confidence 235999999999999997667999999987543
No 399
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=98.45 E-value=8.7e-09 Score=107.55 Aligned_cols=112 Identities=23% Similarity=0.215 Sum_probs=78.0
Q ss_pred CcEEEEEecCCCceeeCCccc-cCCCCCCEEEcCCCCCCCCCChhHhhh----cCCCCEEEccCccCCC----CCCCCCC
Q 006982 80 NRVLNLRLTDMGLKGQFPRGI-RNCSSMTGLDLSSNKLYGPLPDDISKL----VGFLTSLDLSSNNFSG----SIPSNLA 150 (623)
Q Consensus 80 ~~v~~l~l~~~~l~g~~p~~l-~~l~~L~~L~L~~N~l~g~ip~~~~~l----~~~L~~L~L~~N~l~g----~ip~~~~ 150 (623)
..+..|+|++|.++..-...+ ..+++|+.|+|++|.|+..-...+... ...|+.|+|++|.|+. .++..+.
T Consensus 101 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~ 180 (372)
T 3un9_A 101 HALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLLHDQCQITTLRLSNNPLTAAGVAVLMEGLA 180 (372)
T ss_dssp SCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHHSTTCCCCEEECCSSCCHHHHHHHHHHHHH
T ss_pred CCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHHhcCCccceeeCCCCCCChHHHHHHHHHHh
Confidence 468899999998865433333 235678888999888875433344322 2348888888888864 2344456
Q ss_pred CCCCCceeeccCCcCCC----CCCccccccccccccccccccccc
Q 006982 151 NCTYLNSLKLDHNRFSG----QIPPQLGQLGRLKSFSVANNLLSG 191 (623)
Q Consensus 151 ~l~~L~~l~l~~N~~~g----~iP~~l~~l~~L~~l~l~~N~l~g 191 (623)
.+++|++|+|++|+++. .++..+...++|+.|+|++|.++.
T Consensus 181 ~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~ 225 (372)
T 3un9_A 181 GNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGD 225 (372)
T ss_dssp TCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCH
T ss_pred cCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCH
Confidence 77888888888888874 235556677788888888888865
No 400
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=98.34 E-value=1.6e-06 Score=86.86 Aligned_cols=141 Identities=23% Similarity=0.272 Sum_probs=93.2
Q ss_pred ccceeeccCccEEEEEEeCCCcEEEEEEecccc-ccHHHHHHHHHHhCCCCCC---CCcceeEEEEeCCeeeEEEecCCC
Q 006982 309 KNNIIGSGRTGTMYKALLEDGTSLMVKRLQDSQ-RSEKEFVAEMATLGSVKNR---NLVPLLGFCMAKKERLLVYKHMPN 384 (623)
Q Consensus 309 ~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~e~~~l~~l~h~---niv~l~~~~~~~~~~~lV~e~~~~ 384 (623)
..+.|+.|.++.||++...+|..+++|+..... .....|..|++.|+.+++. .+.+++++. ..++||||+++
T Consensus 19 ~~~~l~gG~~n~vy~v~~~dG~~~vvK~~~~~~~~~~~~~~~E~~~L~~L~~~~~v~vP~v~~~~----~~~lvme~l~g 94 (288)
T 3d1u_A 19 AVAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAMEWVDE 94 (288)
T ss_dssp EEEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEECCCC
T ss_pred ceeeeCCcchhheEEEEeCCCCeEEEEecCCCCcchhHHHHHHHHHHHHHHhcCCCCcCeEEEec----CcEEEEEeccc
Confidence 356799999999999999899999999975432 2346789999999999775 567777753 46899999999
Q ss_pred CCHhh-----------hccCCCCCC-----------------CccChHHHHH---H-----------------HHHHHHH
Q 006982 385 GSLYD-----------LLHPADDTG-----------------KSVDWPRRLK---I-----------------AIGAARG 416 (623)
Q Consensus 385 gsL~~-----------~l~~~~~~~-----------------~~l~~~~~~~---i-----------------~~~ia~~ 416 (623)
+++.. .||...... ..-+|..... + ...+-+.
T Consensus 95 ~~~~~~~~~~lg~~LA~LH~~~~~~fG~~~~~~~G~~~q~~~w~~~W~~f~~~~rl~~~l~~a~~~~~~~~~~~~~~~~l 174 (288)
T 3d1u_A 95 RPPTPEAAERFGHQLAAMHLAGAESFGATWDGYIGPLPMDNTPRSTWPEFYAEQRILPYLRRAADRGALTPGDVRLVEKV 174 (288)
T ss_dssp CCCCHHHHHHHHHHHHHHHHTCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHHTHHHHHHHHHTTSSCHHHHHHHHHH
T ss_pred CCCChHHHHHHHHHHHHHHcCCCCccCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHH
Confidence 87531 123221110 0123432210 0 1111122
Q ss_pred HHHHH----hcCCCCcEecCCCCCceeeCCCCCeEEeeccccc
Q 006982 417 FAWLH----HNCNPRIIHRNISSKCILLDDDFEPKISDFGLAR 455 (623)
Q Consensus 417 l~yLH----~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~ 455 (623)
+..|. ....+.++|+|+.+.||+++++ .+.|.|| .+.
T Consensus 175 ~~~l~~~l~~~~~~~l~HgD~~~~N~l~~~~-~~~~iD~-~~~ 215 (288)
T 3d1u_A 175 LDALDHLAGDPEPPARIHGDLWNGNVLWQDD-GAVVIDP-AAH 215 (288)
T ss_dssp HHTHHHHTCSCCCCEEECSCCSGGGEEEETT-EEEECSC-CCE
T ss_pred HHHHHHHhcCCCCCcceECCCCcCcEEEeCC-CeEEEcC-CcC
Confidence 23333 2235689999999999999984 5889999 654
No 401
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=98.27 E-value=3.4e-06 Score=83.51 Aligned_cols=135 Identities=18% Similarity=0.210 Sum_probs=96.2
Q ss_pred eeeccCcc-EEEEEEeC-CCcEEEEEEeccccccHHHHHHHHHHhCCCC-CCCCcceeEEEEeCCeeeEEEecCCCCCHh
Q 006982 312 IIGSGRTG-TMYKALLE-DGTSLMVKRLQDSQRSEKEFVAEMATLGSVK-NRNLVPLLGFCMAKKERLLVYKHMPNGSLY 388 (623)
Q Consensus 312 ~lG~G~~g-~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~lV~e~~~~gsL~ 388 (623)
.+..|..| .||+.... ++..+++|+-... ....+.+|.+.|+.+. +-.+.++++++.+.+..++|||+++|.++.
T Consensus 31 ~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~~--~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~G~~~~ 108 (272)
T 4gkh_A 31 RDNVGQSGATIYRLYGKPNAPELFLKHGKGS--VANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPGKTAF 108 (272)
T ss_dssp EEECSSSSCEEEEEECCTTCCCEEEEEEETH--HHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCCSEEHH
T ss_pred EccCCCcCCeEEEEEecCCCeEEEEEECCCC--CHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeCCcccc
Confidence 45556655 68988754 5667888886433 3446778888877663 334677889999989999999999998887
Q ss_pred hhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcC--------------------------------------------
Q 006982 389 DLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNC-------------------------------------------- 424 (623)
Q Consensus 389 ~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~-------------------------------------------- 424 (623)
+.... .......+..+++..|+-||...
T Consensus 109 ~~~~~--------~~~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (272)
T 4gkh_A 109 QVLEE--------YPDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPVEQVW 180 (272)
T ss_dssp HHHHH--------CGGGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCCHHHHH
T ss_pred ccccC--------CHHHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccchHHHHHH
Confidence 75421 11233456666777777777431
Q ss_pred -----------CCCcEecCCCCCceeeCCCCCeEEeecccccc
Q 006982 425 -----------NPRIIHRNISSKCILLDDDFEPKISDFGLARL 456 (623)
Q Consensus 425 -----------~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~ 456 (623)
.+.++|+|+.+.||++++++.+-|+||+.+..
T Consensus 181 ~~l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~~ 223 (272)
T 4gkh_A 181 KEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVGI 223 (272)
T ss_dssp HHHHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCEE
T ss_pred HHHHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECccccc
Confidence 12378999999999999887778999988764
No 402
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=98.26 E-value=3.7e-06 Score=85.09 Aligned_cols=136 Identities=17% Similarity=0.164 Sum_probs=92.1
Q ss_pred cceeeccCccEEEEEEeCCCcEEEEEEeccccccHHHHHHHHHHhCCCCCC---CCcceeEEEE-eCCeeeEEEecCCCC
Q 006982 310 NNIIGSGRTGTMYKALLEDGTSLMVKRLQDSQRSEKEFVAEMATLGSVKNR---NLVPLLGFCM-AKKERLLVYKHMPNG 385 (623)
Q Consensus 310 ~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~h~---niv~l~~~~~-~~~~~~lV~e~~~~g 385 (623)
.+.++.|....||+. +..+++|+-.. ......+..|.+++..+.+. .+.+.+.+.. ..+..++||||++|.
T Consensus 24 v~~l~~G~~n~v~~v----g~~~VlR~~~~-~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~i~G~ 98 (306)
T 3tdw_A 24 VESLGEGFRNYAILV----NGDWVFRFPKS-QQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKVQGQ 98 (306)
T ss_dssp EEEEEECSSEEEEEE----TTTEEEEEESS-HHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEECCCSE
T ss_pred eeecCCCcceeEEEE----CCEEEEEecCC-chHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEeccCCe
Confidence 356788888899988 56678887432 23346788999999888653 3556666664 345578999999998
Q ss_pred CHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhc------------------------------------------
Q 006982 386 SLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHN------------------------------------------ 423 (623)
Q Consensus 386 sL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~------------------------------------------ 423 (623)
++.+... ..++...+..++.++++.|+.||+.
T Consensus 99 ~l~~~~~------~~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~~~~l 172 (306)
T 3tdw_A 99 ILGEDGM------AVLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESLRDYL 172 (306)
T ss_dssp ECHHHHH------TTSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHHHHHH
T ss_pred ECchhhh------hhCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhhHHHH
Confidence 8876321 1123344444555555555555532
Q ss_pred ---------------CCCCcEecCCCCCceeeCC---CCC-eEEeecccccc
Q 006982 424 ---------------CNPRIIHRNISSKCILLDD---DFE-PKISDFGLARL 456 (623)
Q Consensus 424 ---------------~~~~i~H~dlk~~NILl~~---~~~-~kl~Dfgla~~ 456 (623)
..+.++|+|+++.||++++ ++. ..|+||+.+..
T Consensus 173 ~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~ 224 (306)
T 3tdw_A 173 TLRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAI 224 (306)
T ss_dssp HHHHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEE
T ss_pred HHHHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCC
Confidence 2335799999999999997 455 48999998864
No 403
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=98.22 E-value=1.8e-08 Score=105.06 Aligned_cols=112 Identities=13% Similarity=0.125 Sum_probs=84.5
Q ss_pred CcEEEEEecCCCceeeCCcccc-----CCCCCCEEEcCCCCCCCCCChhHhhhcCCCCEEEccCccCCCCCCCCC-----
Q 006982 80 NRVLNLRLTDMGLKGQFPRGIR-----NCSSMTGLDLSSNKLYGPLPDDISKLVGFLTSLDLSSNNFSGSIPSNL----- 149 (623)
Q Consensus 80 ~~v~~l~l~~~~l~g~~p~~l~-----~l~~L~~L~L~~N~l~g~ip~~~~~l~~~L~~L~L~~N~l~g~ip~~~----- 149 (623)
..+..|+|++|.++..-...|. +.++|+.|+|++|.++..-...+....++|+.|+|++|+++..-...+
T Consensus 72 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~ 151 (372)
T 3un9_A 72 SSLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLL 151 (372)
T ss_dssp TTCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHH
T ss_pred hhCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHH
Confidence 4588999999998864333332 237999999999999754444444434459999999999985433333
Q ss_pred CCCCCCceeeccCCcCCC----CCCccccccccccccccccccccc
Q 006982 150 ANCTYLNSLKLDHNRFSG----QIPPQLGQLGRLKSFSVANNLLSG 191 (623)
Q Consensus 150 ~~l~~L~~l~l~~N~~~g----~iP~~l~~l~~L~~l~l~~N~l~g 191 (623)
...++|++|+|++|+|+. .++..+..+++|+.|+|++|.++.
T Consensus 152 ~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~ 197 (372)
T 3un9_A 152 HDQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGD 197 (372)
T ss_dssp STTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHH
T ss_pred hcCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCc
Confidence 346889999999999974 355566778999999999999875
No 404
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=98.21 E-value=4.8e-08 Score=108.46 Aligned_cols=112 Identities=7% Similarity=-0.001 Sum_probs=75.9
Q ss_pred CcEEEEEecCCCceeeCCccccC-CCCCCEEEcC----CCCCCCC-----CChhHhhhcCCCCEEEccCc--cCCCCCCC
Q 006982 80 NRVLNLRLTDMGLKGQFPRGIRN-CSSMTGLDLS----SNKLYGP-----LPDDISKLVGFLTSLDLSSN--NFSGSIPS 147 (623)
Q Consensus 80 ~~v~~l~l~~~~l~g~~p~~l~~-l~~L~~L~L~----~N~l~g~-----ip~~~~~l~~~L~~L~L~~N--~l~g~ip~ 147 (623)
.++..|+|..+++++..+..++. +++|+.|+|+ .|.+++. ++..+..+ ++|+.|+|+++ .+++..+.
T Consensus 378 ~~L~~L~l~~~~l~~~~~~~l~~~~~~L~~L~l~~~~~~n~l~~~p~~~~~~~~~~~~-~~L~~L~L~~~~~~l~~~~~~ 456 (592)
T 3ogk_B 378 QELEYMAVYVSDITNESLESIGTYLKNLCDFRLVLLDREERITDLPLDNGVRSLLIGC-KKLRRFAFYLRQGGLTDLGLS 456 (592)
T ss_dssp TTCSEEEEEESCCCHHHHHHHHHHCCSCCEEEEEECSCCSCCSSCCCHHHHHHHHHHC-TTCCEEEEECCGGGCCHHHHH
T ss_pred ccCeEEEeecCCccHHHHHHHHhhCCCCcEEEEeecCCCccccCchHHHHHHHHHHhC-CCCCEEEEecCCCCccHHHHH
Confidence 35777888888888777777765 8888888885 6777753 33334454 34888888643 36655554
Q ss_pred CCCC-CCCCceeeccCCcCCC-CCCcccccccccccccccccccccc
Q 006982 148 NLAN-CTYLNSLKLDHNRFSG-QIPPQLGQLGRLKSFSVANNLLSGS 192 (623)
Q Consensus 148 ~~~~-l~~L~~l~l~~N~~~g-~iP~~l~~l~~L~~l~l~~N~l~g~ 192 (623)
.++. +++|+.|+|++|++++ .+|..+..+++|+.|++++|.+++.
T Consensus 457 ~~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~l~~n~l~~~ 503 (592)
T 3ogk_B 457 YIGQYSPNVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRGCCFSER 503 (592)
T ss_dssp HHHHSCTTCCEEEECSCCSSHHHHHHHHTCCTTCCEEEEESCCCBHH
T ss_pred HHHHhCccceEeeccCCCCCHHHHHHHHhcCcccCeeeccCCCCcHH
Confidence 4443 6778888888888775 3455556777788888888877654
No 405
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.18 E-value=9.5e-08 Score=89.28 Aligned_cols=110 Identities=17% Similarity=0.244 Sum_probs=83.6
Q ss_pred CcEEEEEecCC-Ccee----eCCccccCCCCCCEEEcCCCCCCCC----CChhHhhhcCCCCEEEccCccCCCC----CC
Q 006982 80 NRVLNLRLTDM-GLKG----QFPRGIRNCSSMTGLDLSSNKLYGP----LPDDISKLVGFLTSLDLSSNNFSGS----IP 146 (623)
Q Consensus 80 ~~v~~l~l~~~-~l~g----~~p~~l~~l~~L~~L~L~~N~l~g~----ip~~~~~l~~~L~~L~L~~N~l~g~----ip 146 (623)
..++.|+|++| .+.. .+...+...++|++|+|++|.+... +...+... +.|++|+|++|.++.. +.
T Consensus 36 ~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n-~~L~~L~L~~N~i~~~g~~~l~ 114 (185)
T 1io0_A 36 PDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVN-NTLKSLNVESNFISGSGILALV 114 (185)
T ss_dssp TTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHC-SSCCEEECCSSCCCHHHHHHHH
T ss_pred CCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhC-CCcCEEECcCCcCCHHHHHHHH
Confidence 46889999999 8764 2555677889999999999998743 23333333 3499999999999853 45
Q ss_pred CCCCCCCCCceeec--cCCcCCCC----CCcccccccccccccccccccc
Q 006982 147 SNLANCTYLNSLKL--DHNRFSGQ----IPPQLGQLGRLKSFSVANNLLS 190 (623)
Q Consensus 147 ~~~~~l~~L~~l~l--~~N~~~g~----iP~~l~~l~~L~~l~l~~N~l~ 190 (623)
..+...++|++|+| ++|.++.. +...+...++|+.|+|++|.+.
T Consensus 115 ~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 115 EALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp HGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSHH
T ss_pred HHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCCC
Confidence 56777889999999 88999853 3344556689999999999874
No 406
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=98.15 E-value=1e-05 Score=83.89 Aligned_cols=146 Identities=13% Similarity=0.169 Sum_probs=90.7
Q ss_pred CcccceeeccCccEEEEEEeCCCcEEEEEEeccccccHHHHHHHHHHhCCCCCC--CCcceeEEEEeC-CeeeEEEecCC
Q 006982 307 FSKNNIIGSGRTGTMYKALLEDGTSLMVKRLQDSQRSEKEFVAEMATLGSVKNR--NLVPLLGFCMAK-KERLLVYKHMP 383 (623)
Q Consensus 307 f~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~h~--niv~l~~~~~~~-~~~~lV~e~~~ 383 (623)
....+.++.|....+|+... ++..+++|..... ..+..|..++..+... .+.++++++... ...++||||++
T Consensus 43 ~~~i~~l~gG~~n~~y~v~~-~g~~~vlK~~~~~----~~~~~E~~~l~~L~~~gvpvP~vl~~~~~~~g~~~lv~e~l~ 117 (362)
T 3ovc_A 43 VSDLMQLSEGEESRAFSFDV-GGRGYVLRVNSCA----DGFYKDRYVYRHFASAALPIPEVLDIGEFSESLTYCISRRAQ 117 (362)
T ss_dssp CEEEEEEEECSSEEEEEEEE-TTEEEEEEEESCC----HHHHHHHHHHHHHCCSSSCCCCEEEEEESSSSCEEEEEECCC
T ss_pred CceEEECCCCCcceEEEEEE-CCcEEEEEeCCch----hhHHHHHHHHHHHHhcCCCCceEEEeccCCCCCeEEEEEecC
Confidence 33456788999999999886 5788889887543 2577888887777543 355677776654 56789999999
Q ss_pred CCCHhhh------------------ccCCCCCC-------------CccChHHH---------------------HHHHH
Q 006982 384 NGSLYDL------------------LHPADDTG-------------KSVDWPRR---------------------LKIAI 411 (623)
Q Consensus 384 ~gsL~~~------------------l~~~~~~~-------------~~l~~~~~---------------------~~i~~ 411 (623)
|.++.+. ||...... ..-+|... .....
T Consensus 118 G~~l~~l~~~~~~~~~~~lg~~La~LH~~~~~~~~gl~~~~~~~~~~~~~w~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 197 (362)
T 3ovc_A 118 GVTLQDLPETELPAVLQPVAEAMDAIAAADLSQTSGFGPFGPQGIGQYTTWRDFICAIADPHVYHWQTVMDDTVSASVAQ 197 (362)
T ss_dssp SEETTTSCGGGSGGGHHHHHHHHHHHHHCCCTTCBCEEEECTTSBEEESSHHHHHHGGGCTTTCCHHHHCCTTTHHHHHH
T ss_pred CCCcccCCHHHHHHHHHHHHHHHHHHhcCCCccccCccCCCCCCCCccccHHHHHHHHHHHHHHHHHHHHhhcccccchH
Confidence 8666421 11111000 00011111 01111
Q ss_pred HHHHHHHHHHhc-CCCCcEecCCCCCceeeCCCCCeEEeeccccccc
Q 006982 412 GAARGFAWLHHN-CNPRIIHRNISSKCILLDDDFEPKISDFGLARLM 457 (623)
Q Consensus 412 ~ia~~l~yLH~~-~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~ 457 (623)
.+..-+.++... ..+.++|+|+++.||+++++..+.|+||+.+..-
T Consensus 198 ~~~~l~~~l~~lp~~~~l~HgDl~~~Nil~~~~~~~~viD~~~~~~g 244 (362)
T 3ovc_A 198 ALDELMLWAEDCPEVRHLVHADFGSNNVLTDNGRITAVIDWSEAMFG 244 (362)
T ss_dssp HHHHHHHHGGGCCCCCEEECSSCSSTTEEEETTEEEEECCCTTCEEE
T ss_pred HHHHHHHHHhhCCCCcEEEeCCCCCCeEEEeCCCEEEEECCcccccC
Confidence 122222233221 1246899999999999998878889999998754
No 407
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=97.99 E-value=6.8e-06 Score=84.94 Aligned_cols=79 Identities=5% Similarity=-0.030 Sum_probs=54.2
Q ss_pred cee-eccCccEEEEEEeC-------CCcEEEEEEecccc---c-cHHHHHHHHHHhCCCCC---CCCcceeEEEEeC---
Q 006982 311 NII-GSGRTGTMYKALLE-------DGTSLMVKRLQDSQ---R-SEKEFVAEMATLGSVKN---RNLVPLLGFCMAK--- 372 (623)
Q Consensus 311 ~~l-G~G~~g~Vy~~~~~-------~~~~vavK~~~~~~---~-~~~~~~~e~~~l~~l~h---~niv~l~~~~~~~--- 372 (623)
+.| +.|....+|+.... ++..+++|+..... . ....+..|++++..+.. -.+.++++++.+.
T Consensus 26 ~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~~ 105 (357)
T 3ats_A 26 SGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDVL 105 (357)
T ss_dssp EEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTTT
T ss_pred EECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCcc
Confidence 567 78888999998764 26678888765432 1 12456778888777742 3566778777654
Q ss_pred CeeeEEEecCCCCCHhh
Q 006982 373 KERLLVYKHMPNGSLYD 389 (623)
Q Consensus 373 ~~~~lV~e~~~~gsL~~ 389 (623)
...++||||++|..+.+
T Consensus 106 g~~~~v~e~l~G~~l~~ 122 (357)
T 3ats_A 106 GTPFFLMDYVEGVVPPD 122 (357)
T ss_dssp SSCEEEEECCCCBCCCB
T ss_pred CCceEEEEecCCCChhh
Confidence 34689999999877654
No 408
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=97.89 E-value=4.4e-06 Score=92.53 Aligned_cols=105 Identities=9% Similarity=0.028 Sum_probs=69.2
Q ss_pred CcEEEEEecCCCceee----CCccccCCCCCCEEEcCCCCCCC----CCChhHhhhcCCCCEEEccCccCCCCCCCCCCC
Q 006982 80 NRVLNLRLTDMGLKGQ----FPRGIRNCSSMTGLDLSSNKLYG----PLPDDISKLVGFLTSLDLSSNNFSGSIPSNLAN 151 (623)
Q Consensus 80 ~~v~~l~l~~~~l~g~----~p~~l~~l~~L~~L~L~~N~l~g----~ip~~~~~l~~~L~~L~L~~N~l~g~ip~~~~~ 151 (623)
..++.|+|++|.+++. ++..+.++++|+.|+|++|.+++ .++..+.++ ++|+.|+|++|.+.+ +|..+.+
T Consensus 164 ~~L~~L~L~~~~~~~~~~~~l~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~~~~~~-~~L~~L~L~~~~~~~-l~~~~~~ 241 (592)
T 3ogk_B 164 RKIKTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKISPKDLETIARNC-RSLVSVKVGDFEILE-LVGFFKA 241 (592)
T ss_dssp TTCSEEECTTCEEECCCSHHHHHHHHHCCCCCEEECTTCCCSSCCHHHHHHHHHHC-TTCCEEECSSCBGGG-GHHHHHH
T ss_pred CCCCEEECccccccCcchhHHHHHHhcCCCccEEEeeccCCCccCHHHHHHHHhhC-CCCcEEeccCccHHH-HHHHHhh
Confidence 3578888988888766 44456678888888888888873 334444454 458888888888875 6666667
Q ss_pred CCCCceeeccCCcCC---CCCCcccccccccccccccc
Q 006982 152 CTYLNSLKLDHNRFS---GQIPPQLGQLGRLKSFSVAN 186 (623)
Q Consensus 152 l~~L~~l~l~~N~~~---g~iP~~l~~l~~L~~l~l~~ 186 (623)
+++|+.|+++++... +..+..+..+++|+.|++++
T Consensus 242 ~~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~l~~ 279 (592)
T 3ogk_B 242 AANLEEFCGGSLNEDIGMPEKYMNLVFPRKLCRLGLSY 279 (592)
T ss_dssp CTTCCEEEECBCCCCTTCTTSSSCCCCCTTCCEEEETT
T ss_pred hhHHHhhcccccccccchHHHHHHhhccccccccCccc
Confidence 777777777643222 23334455555555555554
No 409
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=97.85 E-value=1.3e-05 Score=81.80 Aligned_cols=84 Identities=18% Similarity=0.262 Sum_probs=42.8
Q ss_pred CCCCCEEEcCCCCCCCCCChhHhhhcCCCCEEEccCccCCCCCC-CCCCCCCCCc-eeeccCCcCCCCCCcccccccccc
Q 006982 103 CSSMTGLDLSSNKLYGPLPDDISKLVGFLTSLDLSSNNFSGSIP-SNLANCTYLN-SLKLDHNRFSGQIPPQLGQLGRLK 180 (623)
Q Consensus 103 l~~L~~L~L~~N~l~g~ip~~~~~l~~~L~~L~L~~N~l~g~ip-~~~~~l~~L~-~l~l~~N~~~g~iP~~l~~l~~L~ 180 (623)
+++|+.|+|++|+++ .||...+.-..+|+.|+|++| ++ .|+ ..|.+|++|+ .++|.+ +++..-+.+|.++++|+
T Consensus 225 ~~~L~~l~L~~n~i~-~I~~~aF~~~~~L~~l~l~~n-i~-~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~ 300 (329)
T 3sb4_A 225 MPNLVSLDISKTNAT-TIPDFTFAQKKYLLKIKLPHN-LK-TIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLR 300 (329)
T ss_dssp CTTCCEEECTTBCCC-EECTTTTTTCTTCCEEECCTT-CC-EECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEE
T ss_pred cCCCeEEECCCCCcc-eecHhhhhCCCCCCEEECCcc-cc-eehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCC
Confidence 555555555555555 455443322333555555555 44 333 2355555555 555555 44422234555555555
Q ss_pred cccccccccc
Q 006982 181 SFSVANNLLS 190 (623)
Q Consensus 181 ~l~l~~N~l~ 190 (623)
.+++++|+++
T Consensus 301 ~l~l~~n~i~ 310 (329)
T 3sb4_A 301 YVLATGDKIT 310 (329)
T ss_dssp EEEECSSCCC
T ss_pred EEEeCCCccC
Confidence 5555555554
No 410
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=97.84 E-value=4.9e-05 Score=77.68 Aligned_cols=141 Identities=16% Similarity=0.281 Sum_probs=78.7
Q ss_pred ceeeccCccEEEEEEeCCCcEEEEEEeccccccHHHHHHHHHHhCCC-----CCCCCccee-E--EEEeCCeeeEEEecC
Q 006982 311 NIIGSGRTGTMYKALLEDGTSLMVKRLQDSQRSEKEFVAEMATLGSV-----KNRNLVPLL-G--FCMAKKERLLVYKHM 382 (623)
Q Consensus 311 ~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l-----~h~niv~l~-~--~~~~~~~~~lV~e~~ 382 (623)
+.|+.|..+.||+....+| .+++|+..... .....|.+++..+ ..|.++... + +....+..++|++|+
T Consensus 38 ~~l~gG~~n~~~~v~~~~~-~~vlk~~~~~~---~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~~~~l~~~i 113 (346)
T 2q83_A 38 DVIQGNQMALVWKVHTDSG-AVCLKRIHRPE---KKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFVVYDWI 113 (346)
T ss_dssp EECC----CEEEEEEETTE-EEEEEEECSCH---HHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTEEEEEEECC
T ss_pred eeccccccCcEEEEEeCCC-CEEEEecCCCH---HHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEEEEEee
Confidence 3466677889999988655 48889887532 2333344444333 224433311 1 123456778999999
Q ss_pred CCCCHh--------------hhccCC---C--CCC-----CccChHHHH-------------------------------
Q 006982 383 PNGSLY--------------DLLHPA---D--DTG-----KSVDWPRRL------------------------------- 407 (623)
Q Consensus 383 ~~gsL~--------------~~l~~~---~--~~~-----~~l~~~~~~------------------------------- 407 (623)
+|.++. ..+|.. . ... ..-.|....
T Consensus 114 ~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 193 (346)
T 2q83_A 114 EGRPFELTVKQDLEFIMKGLADFHTASVGYQPPNGVPIFTKLGRWPNHYTKRCKQMETWKLMAEAEKEDPFSQLYLQEID 193 (346)
T ss_dssp CCBCCCTTSHHHHHHHHHHHHHHHHHHTTCCCCTTCCCCBCTTCHHHHHHHHHHHHHHHHHHHHHCSSCHHHHHHHHHHH
T ss_pred cCccCCCCCHHHHHHHHHHHHHHHHhCCCCCCCccchhcccccchHHHHHHHHHHHHHHHHHHHhccCCcHHHHHHHHHH
Confidence 986542 111210 0 000 112342211
Q ss_pred HHHHHHHHHHHHHHh----------cCCCCcEecCCCCCceeeCCCCCeEEeeccccc
Q 006982 408 KIAIGAARGFAWLHH----------NCNPRIIHRNISSKCILLDDDFEPKISDFGLAR 455 (623)
Q Consensus 408 ~i~~~ia~~l~yLH~----------~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~ 455 (623)
.+...+..++.+|+. ...+.++|+|+++.||+++.++.+.|+||+.+.
T Consensus 194 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~ 251 (346)
T 2q83_A 194 GFIEDGLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQIWVIDLDTVS 251 (346)
T ss_dssp HHHHHHHHHHHHHHHTTHHHHHHHHHHSCCEECSSCSTTSEEECGGGCEEECCCTTCE
T ss_pred HHHHHHHHHHHHHHhchHHHHHHhccccCceecCCCCcccEEEeCCCcEEEEehhhcc
Confidence 011123345666763 124589999999999999888899999998775
No 411
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=97.77 E-value=7.5e-07 Score=98.77 Aligned_cols=111 Identities=13% Similarity=0.060 Sum_probs=76.7
Q ss_pred cEEEEEecCCCceeeCCcccc-CCCCCCEEEcC--C----CCCCCCCCh------hHhhhcCCCCEEEccCccCCCCCCC
Q 006982 81 RVLNLRLTDMGLKGQFPRGIR-NCSSMTGLDLS--S----NKLYGPLPD------DISKLVGFLTSLDLSSNNFSGSIPS 147 (623)
Q Consensus 81 ~v~~l~l~~~~l~g~~p~~l~-~l~~L~~L~L~--~----N~l~g~ip~------~~~~l~~~L~~L~L~~N~l~g~ip~ 147 (623)
++..|.+..+++++..+..+. .+++|+.|+|+ + |.+++ .|. -+..+ ++|+.|+|++ ++++..+.
T Consensus 373 ~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~-~~~~~~~~~l~~~~-~~L~~L~L~~-~l~~~~~~ 449 (594)
T 2p1m_B 373 KLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLTL-EPLDIGFGAIVEHC-KDLRRLSLSG-LLTDKVFE 449 (594)
T ss_dssp TCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEEESSTTCCCTTTC-CCTHHHHHHHHHHC-TTCCEEECCS-SCCHHHHH
T ss_pred hHHHHHHhcCCcCHHHHHHHHhhCCCcceeEeecccCCCcccccC-CchhhHHHHHHhhC-CCccEEeecC-cccHHHHH
Confidence 566777888888876666665 58888888888 4 55652 222 13343 4588888876 66655555
Q ss_pred CCCC-CCCCceeeccCCcCCCCCCccc-cccccccccccccccccccCC
Q 006982 148 NLAN-CTYLNSLKLDHNRFSGQIPPQL-GQLGRLKSFSVANNLLSGSIP 194 (623)
Q Consensus 148 ~~~~-l~~L~~l~l~~N~~~g~iP~~l-~~l~~L~~l~l~~N~l~g~ip 194 (623)
.++. +++|+.|+|++|.+++..+..+ ..+++|+.|+|++|.+++..+
T Consensus 450 ~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~L~~L~L~~n~~~~~~~ 498 (594)
T 2p1m_B 450 YIGTYAKKMEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCPFGDKAL 498 (594)
T ss_dssp HHHHHCTTCCEEEEESCCSSHHHHHHHHHHCTTCCEEEEESCSCCHHHH
T ss_pred HHHHhchhccEeeccCCCCcHHHHHHHHhcCCCcCEEECcCCCCcHHHH
Confidence 5555 7888888888888876555555 567888888888888855433
No 412
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=97.71 E-value=8.9e-05 Score=77.74 Aligned_cols=74 Identities=14% Similarity=0.147 Sum_probs=47.7
Q ss_pred cceeeccCccEEEEEEeC-CCcEEEEEEeccccc--------cHHHHHHHHHHhCCCCC--CCCc-ceeEEEEeCCeeeE
Q 006982 310 NNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQR--------SEKEFVAEMATLGSVKN--RNLV-PLLGFCMAKKERLL 377 (623)
Q Consensus 310 ~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--------~~~~~~~e~~~l~~l~h--~niv-~l~~~~~~~~~~~l 377 (623)
.+.||.|..+.||++... ++..+++|....... ....+..|.+++..+.. +..+ +++.+ +.+..++
T Consensus 35 ~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~--d~~~~~l 112 (397)
T 2olc_A 35 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMAVT 112 (397)
T ss_dssp EEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTEE
T ss_pred EEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEE--cCCccEE
Confidence 467899999999999754 467899997643211 22345678887776632 3333 44443 4455789
Q ss_pred EEecCCCC
Q 006982 378 VYKHMPNG 385 (623)
Q Consensus 378 V~e~~~~g 385 (623)
||||+++.
T Consensus 113 vmE~l~g~ 120 (397)
T 2olc_A 113 VMEDLSHL 120 (397)
T ss_dssp EECCCTTS
T ss_pred EEEeCCCc
Confidence 99999874
No 413
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=97.66 E-value=0.00023 Score=71.88 Aligned_cols=139 Identities=17% Similarity=0.198 Sum_probs=91.5
Q ss_pred cceeeccCccEEEEEEeCCCcEEEEEEeccccccHHHHHHHHHHhCCCC---CCCCcceeEEEEeCCeeeEEEecCCCCC
Q 006982 310 NNIIGSGRTGTMYKALLEDGTSLMVKRLQDSQRSEKEFVAEMATLGSVK---NRNLVPLLGFCMAKKERLLVYKHMPNGS 386 (623)
Q Consensus 310 ~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~---h~niv~l~~~~~~~~~~~lV~e~~~~gs 386 (623)
.+.|+.|....+|+... ++..+++|+.... ....+..|.+.|+.+. ...+.+++++....+..++||||+++..
T Consensus 41 ~~~l~gG~~n~~y~v~~-~~~~~vlK~~~~~--~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l~G~~ 117 (312)
T 3jr1_A 41 KEKLYSGEMNEIWLIND-EVQTVFVKINERS--YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEALNKSK 117 (312)
T ss_dssp EEEECCSSSSEEEEEES-SSCEEEEEEEEGG--GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEECCCCCC
T ss_pred eEEeCCccceeeeEEEE-CCCeEEEEeCCcc--cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEeccCCC
Confidence 45789999999999986 4678888887543 3556888888887773 3567888888888888999999999886
Q ss_pred Hhh-----------hccCCCC-C-----------------CCccChHHHH---HHHH--H--------------HHHHH-
Q 006982 387 LYD-----------LLHPADD-T-----------------GKSVDWPRRL---KIAI--G--------------AARGF- 417 (623)
Q Consensus 387 L~~-----------~l~~~~~-~-----------------~~~l~~~~~~---~i~~--~--------------ia~~l- 417 (623)
+.. .||.... . ...-+|.... ++.. + +...+
T Consensus 118 ~~~~~~~~lG~~LA~LH~~~~~~~fG~~~~~~~G~~~q~n~w~~~W~~f~~~~Rl~~~l~~a~~~g~~~~~~~~l~~~l~ 197 (312)
T 3jr1_A 118 NKQSSFTIFAEKIAQLHQIQGPDKYGLDFDTWLGPIYQPNDWQTSWAKFFSENRIGWQLQICKEKGLIFGNIDLIVQIVA 197 (312)
T ss_dssp CCTTHHHHHHHHHHHHHHCCCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHTHHHHHHHHHHHTCCCSCHHHHHHHHH
T ss_pred CCchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcCCCCCCcCCHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHH
Confidence 521 1232211 0 0012454321 1111 1 11111
Q ss_pred HHHHh-cCCCCcEecCCCCCceeeCCCCCeEEeecc
Q 006982 418 AWLHH-NCNPRIIHRNISSKCILLDDDFEPKISDFG 452 (623)
Q Consensus 418 ~yLH~-~~~~~i~H~dlk~~NILl~~~~~~kl~Dfg 452 (623)
..|.. ...|.++|+|+.+.|++++.++ +.|.|+.
T Consensus 198 ~~L~~~~~~~~l~HgD~~~~N~l~~~~~-~~~iD~~ 232 (312)
T 3jr1_A 198 DTLSKHNPKPSILHGNLWIENCIQVDDK-IFVCNPA 232 (312)
T ss_dssp HHHTTCCCCCEEECSSCSGGGEEEETTE-EEECSCC
T ss_pred HHhccCCCCceeEeCCCCcCcEeecCCC-eEEEcCc
Confidence 23321 2356899999999999999887 8888873
No 414
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=97.64 E-value=4.5e-06 Score=77.77 Aligned_cols=97 Identities=14% Similarity=0.220 Sum_probs=72.8
Q ss_pred eCCccccCCCCCCEEEcCCC-CCCCC----CChhHhhhcCCCCEEEccCccCCCC----CCCCCCCCCCCceeeccCCcC
Q 006982 95 QFPRGIRNCSSMTGLDLSSN-KLYGP----LPDDISKLVGFLTSLDLSSNNFSGS----IPSNLANCTYLNSLKLDHNRF 165 (623)
Q Consensus 95 ~~p~~l~~l~~L~~L~L~~N-~l~g~----ip~~~~~l~~~L~~L~L~~N~l~g~----ip~~~~~l~~L~~l~l~~N~~ 165 (623)
.+...+...++|+.|+|++| .+... +...+... +.|++|+|++|++... +...+...++|++|+|++|++
T Consensus 27 ~l~~~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~-~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i 105 (185)
T 1io0_A 27 TLKRIQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTN-TYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFI 105 (185)
T ss_dssp HHHHHHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTC-CSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCC
T ss_pred HHHHHHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhC-CCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcC
Confidence 44556778999999999999 88743 22333332 4599999999998742 233455668999999999999
Q ss_pred CCC----CCcccccccccccccc--cccccccc
Q 006982 166 SGQ----IPPQLGQLGRLKSFSV--ANNLLSGS 192 (623)
Q Consensus 166 ~g~----iP~~l~~l~~L~~l~l--~~N~l~g~ 192 (623)
+.. +...+...++|+.|+| ++|.++..
T Consensus 106 ~~~g~~~l~~~L~~n~~L~~L~L~~~~N~i~~~ 138 (185)
T 1io0_A 106 SGSGILALVEALQSNTSLIELRIDNQSQPLGNN 138 (185)
T ss_dssp CHHHHHHHHHGGGGCSSCCEEECCCCSSCCCHH
T ss_pred CHHHHHHHHHHHHhCCCceEEEecCCCCCCCHH
Confidence 853 4566777889999999 88988643
No 415
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=97.63 E-value=0.00015 Score=72.43 Aligned_cols=77 Identities=23% Similarity=0.307 Sum_probs=54.7
Q ss_pred CcccceeeccCccEEEEEEeCCCcEEEEEEecccc-ccHHHHHHHHHHhCCCCC---CCCcceeEEEEeCCeeeEEEecC
Q 006982 307 FSKNNIIGSGRTGTMYKALLEDGTSLMVKRLQDSQ-RSEKEFVAEMATLGSVKN---RNLVPLLGFCMAKKERLLVYKHM 382 (623)
Q Consensus 307 f~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~e~~~l~~l~h---~niv~l~~~~~~~~~~~lV~e~~ 382 (623)
....+.+|.|..+.||+....||+.+++|+-.... .....|..|.+.|+.+.. -.+.+++++ +..++||||+
T Consensus 17 v~~v~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~----~~~~lv~e~l 92 (288)
T 3f7w_A 17 VAAVAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGW----DDRTLAMEWV 92 (288)
T ss_dssp EEEEEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEE----ETTEEEEECC
T ss_pred eEEEEecCCCCCeEEEEEEECCCCEEEEEEeCCCCcchhhHHHHHHHHHHHHHhhCCCCcceEEec----cCceEEEEee
Confidence 34456789999999999999999999999875433 233457788888776632 234444443 2347899999
Q ss_pred CCCCH
Q 006982 383 PNGSL 387 (623)
Q Consensus 383 ~~gsL 387 (623)
+++..
T Consensus 93 ~~~~~ 97 (288)
T 3f7w_A 93 DERPP 97 (288)
T ss_dssp CCCCC
T ss_pred cccCC
Confidence 87654
No 416
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=97.57 E-value=7.1e-05 Score=76.30 Aligned_cols=98 Identities=12% Similarity=0.122 Sum_probs=45.2
Q ss_pred EEEEEecCCCceeeCCccccCCCCCCEEEcCCCCCCCCCChhHhhhcCCCC-EEEccCccCCCCCCCCCCCCCCCceeec
Q 006982 82 VLNLRLTDMGLKGQFPRGIRNCSSMTGLDLSSNKLYGPLPDDISKLVGFLT-SLDLSSNNFSGSIPSNLANCTYLNSLKL 160 (623)
Q Consensus 82 v~~l~l~~~~l~g~~p~~l~~l~~L~~L~L~~N~l~g~ip~~~~~l~~~L~-~L~L~~N~l~g~ip~~~~~l~~L~~l~l 160 (623)
++.|+|++|+++..-+..|.+|++|+.|+|++| +. .|+...+.-..+|+ .|+|++ +++-.-+..|.+|++|+.|+|
T Consensus 228 L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~~n-i~-~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l~l 304 (329)
T 3sb4_A 228 LVSLDISKTNATTIPDFTFAQKKYLLKIKLPHN-LK-TIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYVLA 304 (329)
T ss_dssp CCEEECTTBCCCEECTTTTTTCTTCCEEECCTT-CC-EECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEEEE
T ss_pred CeEEECCCCCcceecHhhhhCCCCCCEEECCcc-cc-eehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEEEe
Confidence 445555555554333344555555555555554 33 34433222223355 555554 444111234555555555555
Q ss_pred cCCcCCCCCCcccccccccccc
Q 006982 161 DHNRFSGQIPPQLGQLGRLKSF 182 (623)
Q Consensus 161 ~~N~~~g~iP~~l~~l~~L~~l 182 (623)
++|+++..-+..|.++++|+.+
T Consensus 305 ~~n~i~~I~~~aF~~~~~L~~l 326 (329)
T 3sb4_A 305 TGDKITTLGDELFGNGVPSKLI 326 (329)
T ss_dssp CSSCCCEECTTTTCTTCCCCEE
T ss_pred CCCccCccchhhhcCCcchhhh
Confidence 5555553223344455555444
No 417
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=97.54 E-value=8.5e-06 Score=90.21 Aligned_cols=105 Identities=20% Similarity=0.154 Sum_probs=69.6
Q ss_pred CcEEEEEecCCCceeeCCcccc-CCCCCCEEEcCCC-CCCCC-CChhHhhhcCCCCEEEccCccCCCCCCCCC----CCC
Q 006982 80 NRVLNLRLTDMGLKGQFPRGIR-NCSSMTGLDLSSN-KLYGP-LPDDISKLVGFLTSLDLSSNNFSGSIPSNL----ANC 152 (623)
Q Consensus 80 ~~v~~l~l~~~~l~g~~p~~l~-~l~~L~~L~L~~N-~l~g~-ip~~~~~l~~~L~~L~L~~N~l~g~ip~~~----~~l 152 (623)
.+++.|+|+++.+++..+..+. .+++|+.|+|++| .++.. ++..+.++ ++|++|+|++|.+++..+..+ ..+
T Consensus 105 ~~L~~L~L~~~~~~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~-~~L~~L~L~~~~i~~~~~~~l~~~~~~~ 183 (594)
T 2p1m_B 105 TWLEEIRLKRMVVTDDCLELIAKSFKNFKVLVLSSCEGFSTDGLAAIAATC-RNLKELDLRESDVDDVSGHWLSHFPDTY 183 (594)
T ss_dssp TTCCEEEEESCBCCHHHHHHHHHHCTTCCEEEEESCEEEEHHHHHHHHHHC-TTCCEEECTTCEEECCCGGGGGGSCTTC
T ss_pred CCCCeEEeeCcEEcHHHHHHHHHhCCCCcEEeCCCcCCCCHHHHHHHHHhC-CCCCEEeCcCCccCCcchHHHHHHhhcC
Confidence 3577888888887777666665 6788888888887 45432 33333344 458888888888776544333 356
Q ss_pred CCCceeeccCCcCCCCCCc-c----ccccccccccccccc
Q 006982 153 TYLNSLKLDHNRFSGQIPP-Q----LGQLGRLKSFSVANN 187 (623)
Q Consensus 153 ~~L~~l~l~~N~~~g~iP~-~----l~~l~~L~~l~l~~N 187 (623)
++|+.|+|++|. +.++. . +.++++|+.|++++|
T Consensus 184 ~~L~~L~l~~~~--~~~~~~~l~~l~~~~~~L~~L~L~~~ 221 (594)
T 2p1m_B 184 TSLVSLNISCLA--SEVSFSALERLVTRCPNLKSLKLNRA 221 (594)
T ss_dssp CCCCEEECTTCC--SCCCHHHHHHHHHHCTTCCEEECCTT
T ss_pred CcCcEEEecccC--CcCCHHHHHHHHHhCCCCcEEecCCC
Confidence 688888888876 23331 2 244578888888877
No 418
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=97.50 E-value=5.2e-06 Score=85.90 Aligned_cols=108 Identities=16% Similarity=0.198 Sum_probs=74.8
Q ss_pred CcEEEEEecCCC-ceeeCCccccCCCCCCEEEcCCCCCCCCCChhHh--hhcCCCCEEEccC--ccCCCC--C---CCCC
Q 006982 80 NRVLNLRLTDMG-LKGQFPRGIRNCSSMTGLDLSSNKLYGPLPDDIS--KLVGFLTSLDLSS--NNFSGS--I---PSNL 149 (623)
Q Consensus 80 ~~v~~l~l~~~~-l~g~~p~~l~~l~~L~~L~L~~N~l~g~ip~~~~--~l~~~L~~L~L~~--N~l~g~--i---p~~~ 149 (623)
.++..|+|+++. + .+++ +. +++|+.|+|..+.++...-..+. .+ ++|+.|+|+. |...|. + -..+
T Consensus 172 P~L~~L~L~g~~~l--~l~~-~~-~~~L~~L~L~~~~l~~~~l~~l~~~~l-p~L~~L~L~~~~~~~~~~~~~~~l~~~l 246 (362)
T 2ra8_A 172 PLLNNLKIKGTNNL--SIGK-KP-RPNLKSLEIISGGLPDSVVEDILGSDL-PNLEKLVLYVGVEDYGFDGDMNVFRPLF 246 (362)
T ss_dssp TTCCEEEEECCBTC--BCCS-CB-CTTCSEEEEECSBCCHHHHHHHHHSBC-TTCCEEEEECBCGGGTCCSCGGGTGGGS
T ss_pred CCCcEEEEeCCCCc--eecc-cc-CCCCcEEEEecCCCChHHHHHHHHccC-CCCcEEEEeccccccccchhHHHHHHHH
Confidence 468899998873 3 3444 43 89999999998877643333343 33 5699999864 332222 1 1112
Q ss_pred --CCCCCCceeeccCCcCCCCCCcccc---cccccccccccccccccc
Q 006982 150 --ANCTYLNSLKLDHNRFSGQIPPQLG---QLGRLKSFSVANNLLSGS 192 (623)
Q Consensus 150 --~~l~~L~~l~l~~N~~~g~iP~~l~---~l~~L~~l~l~~N~l~g~ 192 (623)
..+++|++|+|++|.+++..+..+. .+++|+.|+|+.|.+++.
T Consensus 247 ~~~~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~ 294 (362)
T 2ra8_A 247 SKDRFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDE 294 (362)
T ss_dssp CTTTCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBHH
T ss_pred hcCCCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCChH
Confidence 3589999999999999865554454 478999999999999874
No 419
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=97.29 E-value=0.00051 Score=68.96 Aligned_cols=139 Identities=12% Similarity=0.037 Sum_probs=73.7
Q ss_pred cceeeccCccEEEEEEeCCCcEEEEEEeccccccHHHHHHHHHHhCCCCCCCC-cceeEEEEeCCeeeEEEecC-CCCCH
Q 006982 310 NNIIGSGRTGTMYKALLEDGTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRNL-VPLLGFCMAKKERLLVYKHM-PNGSL 387 (623)
Q Consensus 310 ~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~h~ni-v~l~~~~~~~~~~~lV~e~~-~~gsL 387 (623)
.+.|+.|....+|+. ..+++|+.............|+.++..+....+ .+++++ +.+..++++||+ ++-++
T Consensus 23 i~~l~gG~tN~~~~~-----~~~vlR~~~~~~~~~~~r~~E~~~l~~l~~~g~~P~~~~~--~~~~~~~v~e~i~~g~~l 95 (301)
T 3dxq_A 23 PLERLGGLTNLVFRA-----GDLCLRIPGKGTEEYINRANEAVAAREAAKAGVSPEVLHV--DPATGVMVTRYIAGAQTM 95 (301)
T ss_dssp CEEEESCSSEEEEEE-----TTEEEEEECC----CCCHHHHHHHHHHHHHTTSSCCEEEE--CTTTCCEEEECCTTCEEC
T ss_pred eeEcCCcccccccee-----eeEEEECCCCCccceeCHHHHHHHHHHHHHcCCCCceEEE--ECCCCEEEEeecCCCccC
Confidence 567888999999998 457788775432111123457766665543333 344443 444567999999 55444
Q ss_pred hh------------------hccCCCC-CCCccChHHHH-HHHH--------------HHHHHHH----HHHh-cCCCCc
Q 006982 388 YD------------------LLHPADD-TGKSVDWPRRL-KIAI--------------GAARGFA----WLHH-NCNPRI 428 (623)
Q Consensus 388 ~~------------------~l~~~~~-~~~~l~~~~~~-~i~~--------------~ia~~l~----yLH~-~~~~~i 428 (623)
.. .+|.... .....+....+ .+.. .+...+. .+.. ...+.+
T Consensus 96 ~~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~~~~l 175 (301)
T 3dxq_A 96 SPEKFKTRPGSPARAGEAFRKLHGSGAVFPFRFELFAMIDDYLKVLSTKNVTLPAGYHDVVREAGGVRSALAAHPLPLAA 175 (301)
T ss_dssp CHHHHHHSTTHHHHHHHHHHHHHTSCCCCSSBCCHHHHHHHHHHHHC--CCCCCTTHHHHHHHHHHHHHHHHSSCCCCEE
T ss_pred CHhhHhhhHHHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHhhcCCCchhhHHHHHHHHHHHHHHHHhcCCCcee
Confidence 21 1122111 01111111111 0100 0111111 1111 123358
Q ss_pred EecCCCCCceeeCCCCCeEEeecccccc
Q 006982 429 IHRNISSKCILLDDDFEPKISDFGLARL 456 (623)
Q Consensus 429 ~H~dlk~~NILl~~~~~~kl~Dfgla~~ 456 (623)
+|+|+.+.||+ .+++.+.++||..+..
T Consensus 176 ~HgDl~~~Nil-~~~~~~~lID~e~a~~ 202 (301)
T 3dxq_A 176 CHCDPLCENFL-DTGERMWIVDWEYSGM 202 (301)
T ss_dssp ECSCCCGGGEE-ECSSCEEECCCTTCEE
T ss_pred eccCCCcCCEE-ECCCCEEEEecccccC
Confidence 99999999999 5566789999988864
No 420
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=97.27 E-value=0.001 Score=70.11 Aligned_cols=80 Identities=11% Similarity=0.080 Sum_probs=48.6
Q ss_pred CCCcEecCCCCCceeeCCCCCeEEeecccccccCCCCCcccccccCCCCcccccCcccccCCC---CCcchhHHHHHHHH
Q 006982 425 NPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLV---ATPKGDVYSFGTVL 501 (623)
Q Consensus 425 ~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~---~s~k~DV~sfGvil 501 (623)
.+.++|+|+++.||++++++ ++++||+.+..-.+. ......... -...|.+|+...... .....+++.....+
T Consensus 231 ~~~liHGDl~~~Nil~~~~~-~~lID~e~a~~G~p~-~Dla~~l~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (420)
T 2pyw_A 231 AQALIHGDLHTGSVMVTQDS-TQVIDPEFSFYGPMG-FDIGAYLGN--LILAFFAQDGHATQENDRKEYKQWILRTIEQT 306 (420)
T ss_dssp CCEEECSCCSGGGEEECSSC-EEECCCTTCEEECHH-HHHHHHHHH--HHHHHHHGGGGCCSSCCSHHHHHHHHHHHHHH
T ss_pred CCeEEecCCCCCcEEEeCCC-CEEEeCcccccCchH-HHHHHHHHH--HHHHHHhcccccccccchHHHHHHHHHHHHHH
Confidence 44799999999999999876 999999998754321 111111100 013456666553211 12235556778888
Q ss_pred HHHHhCC
Q 006982 502 LELVTGE 508 (623)
Q Consensus 502 ~elltg~ 508 (623)
|+.+++.
T Consensus 307 ~~~y~~~ 313 (420)
T 2pyw_A 307 WNLFNKR 313 (420)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 8877653
No 421
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=97.24 E-value=0.0029 Score=64.00 Aligned_cols=143 Identities=14% Similarity=0.127 Sum_probs=81.7
Q ss_pred ceeeccCccEEEEEEeCCCcEEEEEEeccccccHHHHHHHHHHhCCCCCC--CCcceeEE-----EEeCCeeeEEEecCC
Q 006982 311 NIIGSGRTGTMYKALLEDGTSLMVKRLQDSQRSEKEFVAEMATLGSVKNR--NLVPLLGF-----CMAKKERLLVYKHMP 383 (623)
Q Consensus 311 ~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~h~--niv~l~~~-----~~~~~~~~lV~e~~~ 383 (623)
..++ |....||+....+|..+++|...........+..|..++..+... .+++++.. ....+..+++++|++
T Consensus 32 ~~l~-g~~n~~y~v~~~~g~~~vlK~~~~~~~~~~~~~~E~~~~~~L~~~g~~vp~~~~~~g~~~~~~~g~~~~l~~~i~ 110 (328)
T 1zyl_A 32 TPLN-SYENRVYQFQDEDRRRFVVKFYRPERWTADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAVFPSVG 110 (328)
T ss_dssp EEEC-CSSSEEEEECCTTCCCEEEEEECTTTSCHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTEEEEEEECCC
T ss_pred Eeec-CcccceEEEEcCCCCEEEEEEcCCCCCCHHHHHHHHHHHHHHHHcCCeecceeecCCcEEEEECCEEEEEEEecC
Confidence 3466 788899998887787899999864433455666677776665321 23334332 122445678999998
Q ss_pred CCCHhh-----h---------ccC----CCC-CCCccChHHH----HHH---------------HHHHHHHHHHHHhc--
Q 006982 384 NGSLYD-----L---------LHP----ADD-TGKSVDWPRR----LKI---------------AIGAARGFAWLHHN-- 423 (623)
Q Consensus 384 ~gsL~~-----~---------l~~----~~~-~~~~l~~~~~----~~i---------------~~~ia~~l~yLH~~-- 423 (623)
|..+.. . +|. ... .....++... ..+ ...+...+..+...
T Consensus 111 G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 190 (328)
T 1zyl_A 111 GRQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATLIPSGLKAAFLKATDELIAAVTAHWR 190 (328)
T ss_dssp CEECCSSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCSSSCTTTHHHHHHHHHHHHHHHHHHCC
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHhhccCCCccCCCCCHHHHHhhHHHHHhhcCcCCHHHHHHHHHHHHHHHHHHHHHhh
Confidence 854321 0 111 000 0112222211 000 11111223333322
Q ss_pred --CCCCcEecCCCCCceeeCCCCCeEEeecccccc
Q 006982 424 --CNPRIIHRNISSKCILLDDDFEPKISDFGLARL 456 (623)
Q Consensus 424 --~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~ 456 (623)
..+.++|+|+++.||+++ + .+.|+||+.+..
T Consensus 191 ~~~~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~~ 223 (328)
T 1zyl_A 191 EDFTVLRLHGDCHAGNILWR-D-GPMFVDLDDARN 223 (328)
T ss_dssp SCSCCEECCSSCSGGGEEES-S-SEEECCCTTCCE
T ss_pred hcCCeeeeeCCCCcccEeEc-C-CCEEEECCCCCc
Confidence 234688999999999999 4 899999988764
No 422
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=97.15 E-value=0.0013 Score=66.57 Aligned_cols=159 Identities=10% Similarity=0.102 Sum_probs=85.7
Q ss_pred cCHHHHHHHhccCcc-----cceeeccCccEEEEEEeCCCcEEEEEEeccccccHHHHHHHHHHhCCCCCCC--CcceeE
Q 006982 295 MRLSDLMKATNSFSK-----NNIIGSGRTGTMYKALLEDGTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRN--LVPLLG 367 (623)
Q Consensus 295 ~~~~~l~~~~~~f~~-----~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~h~n--iv~l~~ 367 (623)
++.+++......|.. .+.|+.|....+|+....+| .+++|...... ....+..|.+++..+.... +.+++.
T Consensus 7 ~~~~~l~~~l~~~~~~~~~~~~~i~~G~~n~~~~v~~~~g-~~vlk~~~~~~-~~~~l~~e~~~l~~L~~~g~~vP~~~~ 84 (322)
T 2ppq_A 7 ITEDELRNFLTQYDVGSLTSYKGIAEGVENSNFLLHTTKD-PLILTLYEKRV-EKNDLPFFLGLMQHLAAKGLSCPLPLP 84 (322)
T ss_dssp CCHHHHHHHHTTBCCCCEEEEEEECC---EEEEEEEESSC-CEEEEEECC----CCHHHHHHHHHHHHHHTTCCCCCBCC
T ss_pred CCHHHHHHHHHhCCCCcceEeeccCCCcccceEEEEeCCc-cEEEEEeCCCC-CHHHHHHHHHHHHHHHHCCCCCCcccC
Confidence 445555555555654 23466688889999987766 57788876521 1223445666555442211 222321
Q ss_pred ------EEEeCCeeeEEEecCCCCCHhh--------------hccCC----CCCC----CccChHHHHH-----------
Q 006982 368 ------FCMAKKERLLVYKHMPNGSLYD--------------LLHPA----DDTG----KSVDWPRRLK----------- 408 (623)
Q Consensus 368 ------~~~~~~~~~lV~e~~~~gsL~~--------------~l~~~----~~~~----~~l~~~~~~~----------- 408 (623)
+....+..+++++|++|..+.. .+|.. .... ....|.....
T Consensus 85 ~~~g~~~~~~~g~~~~l~~~l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~ 164 (322)
T 2ppq_A 85 RKDGELLGELSGRPAALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEVEK 164 (322)
T ss_dssp BTTCCSCEEETTEEEEEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGTST
T ss_pred CCCCCEEEEECCEEEEEEEeCCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHHhhhh
Confidence 1122456689999999865421 01211 0000 1112332111
Q ss_pred -HHHHHHHHHHHHHhc----CCCCcEecCCCCCceeeCCCCCeEEeeccccc
Q 006982 409 -IAIGAARGFAWLHHN----CNPRIIHRNISSKCILLDDDFEPKISDFGLAR 455 (623)
Q Consensus 409 -i~~~ia~~l~yLH~~----~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~ 455 (623)
+...+...+.++++. ..++++|+|+++.||+++++..+.|+||+.+.
T Consensus 165 ~l~~~l~~~~~~l~~~~~~~~~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~ 216 (322)
T 2ppq_A 165 GLREEIRPEIDYLAAHWPKDLPAGVIHADLFQDNVFFLGDELSGLIDFYFAC 216 (322)
T ss_dssp THHHHHHHHHHHHHHHCCCSSCEEEECSCCCGGGEEEETTEEEEECCCTTCE
T ss_pred hhHHHHHHHHHHHHhhCcccCCcccCCCCCCccCEEEeCCceEEEecchhcc
Confidence 011244455666543 23479999999999999987666899998775
No 423
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=97.03 E-value=0.00083 Score=58.28 Aligned_cols=55 Identities=25% Similarity=0.310 Sum_probs=33.4
Q ss_pred EEEcCCCCCC-CCCChhHhhhcCCCCEEEccCccCCCCCCC-CCCCCCCCceeeccCCcCC
Q 006982 108 GLDLSSNKLY-GPLPDDISKLVGFLTSLDLSSNNFSGSIPS-NLANCTYLNSLKLDHNRFS 166 (623)
Q Consensus 108 ~L~L~~N~l~-g~ip~~~~~l~~~L~~L~L~~N~l~g~ip~-~~~~l~~L~~l~l~~N~~~ 166 (623)
.++.++++|+ ..+|..+. .+|+.|+|++|+|+ .||. .|..+++|+.|+|++|.+.
T Consensus 12 ~v~Cs~~~L~~~~vP~~lp---~~l~~L~Ls~N~l~-~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTAFP---VDTTELVLTGNNLT-ALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp EEECCSSCCCTTTSCSCCC---TTCSEEECTTSCCS-SCCTTTGGGCTTCCEEECCSSCCB
T ss_pred EEEeCCCCCccccCCCCCC---cCCCEEECCCCcCC-ccChhhhhhccccCEEEecCCCee
Confidence 4455555554 34554432 23777777777777 4544 4566777777777777665
No 424
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=96.99 E-value=0.00017 Score=74.53 Aligned_cols=110 Identities=13% Similarity=0.165 Sum_probs=72.8
Q ss_pred CcEEEEEecCCCc---------eeeCCccccCCCCCCEEEcCCCCCCCCCChhHhhhcCCCCEEEccCccCCCCCCCCCC
Q 006982 80 NRVLNLRLTDMGL---------KGQFPRGIRNCSSMTGLDLSSNKLYGPLPDDISKLVGFLTSLDLSSNNFSGSIPSNLA 150 (623)
Q Consensus 80 ~~v~~l~l~~~~l---------~g~~p~~l~~l~~L~~L~L~~N~l~g~ip~~~~~l~~~L~~L~L~~N~l~g~ip~~~~ 150 (623)
.++..|.+.++.. .+.+++.+..+++|+.|+|++|.-. .+|+ + . .++|+.|+|..+.++......++
T Consensus 139 ~~L~~L~l~~~~~e~~~is~~~~~~L~~ll~~~P~L~~L~L~g~~~l-~l~~-~-~-~~~L~~L~L~~~~l~~~~l~~l~ 214 (362)
T 2ra8_A 139 AHFEGLFWGDIDFEEQEISWIEQVDLSPVLDAMPLLNNLKIKGTNNL-SIGK-K-P-RPNLKSLEIISGGLPDSVVEDIL 214 (362)
T ss_dssp TTCSEEEECCCCTTTCCGGGCBCCBCHHHHHTCTTCCEEEEECCBTC-BCCS-C-B-CTTCSEEEEECSBCCHHHHHHHH
T ss_pred chhhheeecCcchhhcccccccccCHHHHHhcCCCCcEEEEeCCCCc-eecc-c-c-CCCCcEEEEecCCCChHHHHHHH
Confidence 3677888866533 2345566778899999999988311 3554 3 2 34599999998887643323343
Q ss_pred --CCCCCceeeccC--CcCCCCC-----Cccc--cccccccccccccccccccC
Q 006982 151 --NCTYLNSLKLDH--NRFSGQI-----PPQL--GQLGRLKSFSVANNLLSGSI 193 (623)
Q Consensus 151 --~l~~L~~l~l~~--N~~~g~i-----P~~l--~~l~~L~~l~l~~N~l~g~i 193 (623)
.+++|+.|+|+. |...|.. ...+ ..+++|+.|+|++|.++...
T Consensus 215 ~~~lp~L~~L~L~~~~~~~~~~~~~~~l~~~l~~~~~p~Lr~L~L~~~~i~~~~ 268 (362)
T 2ra8_A 215 GSDLPNLEKLVLYVGVEDYGFDGDMNVFRPLFSKDRFPNLKWLGIVDAEEQNVV 268 (362)
T ss_dssp HSBCTTCCEEEEECBCGGGTCCSCGGGTGGGSCTTTCTTCCEEEEESCTTHHHH
T ss_pred HccCCCCcEEEEeccccccccchhHHHHHHHHhcCCCCCcCEEeCCCCCCchHH
Confidence 789999999863 3332221 1122 35789999999999987543
No 425
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=96.86 E-value=0.0032 Score=63.97 Aligned_cols=33 Identities=21% Similarity=0.297 Sum_probs=28.1
Q ss_pred CCCcEecCCCCCceeeCCC----CCeEEeeccccccc
Q 006982 425 NPRIIHRNISSKCILLDDD----FEPKISDFGLARLM 457 (623)
Q Consensus 425 ~~~i~H~dlk~~NILl~~~----~~~kl~Dfgla~~~ 457 (623)
.+.++|||+.+.||+++.+ ..+.|+||+.+..-
T Consensus 182 ~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~G 218 (333)
T 3csv_A 182 DMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKLG 218 (333)
T ss_dssp CCEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEEE
T ss_pred CCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCcC
Confidence 3479999999999999875 67999999988753
No 426
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=96.73 E-value=0.0035 Score=66.21 Aligned_cols=73 Identities=18% Similarity=0.281 Sum_probs=48.6
Q ss_pred cceeeccCccEEEEEEeCC--------CcEEEEEEeccccccHHHHHHHHHHhCCCCCCCC-cceeEEEEeCCeeeEEEe
Q 006982 310 NNIIGSGRTGTMYKALLED--------GTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRNL-VPLLGFCMAKKERLLVYK 380 (623)
Q Consensus 310 ~~~lG~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~~~~~~~e~~~l~~l~h~ni-v~l~~~~~~~~~~~lV~e 380 (623)
.+.|+.|....+|+....+ +..+++|+.... .....+..|..++..+...++ .++++.+. + .+|+|
T Consensus 78 v~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~-~~~~~li~E~~~l~~L~~~g~~P~l~~~~~--~--g~v~e 152 (429)
T 1nw1_A 78 ISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNP-ETESHLVAESVIFTLLSERHLGPKLYGIFS--G--GRLEE 152 (429)
T ss_dssp EEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSC-CCHHHHHHHHHHHHHHHHTTSSSCEEEEET--T--EEEEC
T ss_pred EEEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCC-CcHHHHHHHHHHHHHHHhCCCCCcEEEEeC--C--CEEEE
Confidence 3567778889999998753 578899988432 122455678888877743344 45666543 2 38999
Q ss_pred cCCCCCH
Q 006982 381 HMPNGSL 387 (623)
Q Consensus 381 ~~~~gsL 387 (623)
|++|-++
T Consensus 153 ~l~G~~l 159 (429)
T 1nw1_A 153 YIPSRPL 159 (429)
T ss_dssp CCCEEEC
T ss_pred EeCCccc
Confidence 9986443
No 427
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.65 E-value=0.0027 Score=54.97 Aligned_cols=56 Identities=21% Similarity=0.302 Sum_probs=43.7
Q ss_pred CEEEccCccCC-CCCCCCCCCCCCCceeeccCCcCCCCCCccccccccccccccccccc
Q 006982 132 TSLDLSSNNFS-GSIPSNLANCTYLNSLKLDHNRFSGQIPPQLGQLGRLKSFSVANNLL 189 (623)
Q Consensus 132 ~~L~L~~N~l~-g~ip~~~~~l~~L~~l~l~~N~~~g~iP~~l~~l~~L~~l~l~~N~l 189 (623)
..++.+++.|+ ..+|..+. ++|++|+|++|+|+..-+..|..+++|+.|+|++|.+
T Consensus 11 ~~v~Cs~~~L~~~~vP~~lp--~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~ 67 (130)
T 3rfe_A 11 TLVDCGRRGLTWASLPTAFP--VDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPW 67 (130)
T ss_dssp TEEECCSSCCCTTTSCSCCC--TTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCC
T ss_pred CEEEeCCCCCccccCCCCCC--cCCCEEECCCCcCCccChhhhhhccccCEEEecCCCe
Confidence 57999999997 46786543 3699999999999954445567888999888887765
No 428
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=96.62 E-value=0.0052 Score=65.32 Aligned_cols=74 Identities=15% Similarity=0.080 Sum_probs=45.9
Q ss_pred cceeeccCccEEEEEEeCC-CcEEEEEEeccccccHHHHHHHHHHhCCCCCCCC-cceeEEEEeCCeeeEEEecCCCCCH
Q 006982 310 NNIIGSGRTGTMYKALLED-GTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRNL-VPLLGFCMAKKERLLVYKHMPNGSL 387 (623)
Q Consensus 310 ~~~lG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~e~~~l~~l~h~ni-v~l~~~~~~~~~~~lV~e~~~~gsL 387 (623)
.+.|+.|-...+|+....+ +..+++|+........-....|..++..+...++ .++++++. + ..|+||++|-+|
T Consensus 113 i~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~~~~idR~~E~~vl~~L~~~gl~P~ll~~~~--~--G~v~e~I~G~~l 188 (458)
T 2qg7_A 113 FQIINGGITNILIKVKDMSKQAKYLIRLYGPKTDEIINREREKKISCILYNKNIAKKIYVFFT--N--GRIEEFMDGYAL 188 (458)
T ss_dssp EEEECC--CEEEEEEEETTTTEEEEEEEECC-CCSCSCHHHHHHHHHHHTTSSSBCCEEEEET--T--EEEEECCCSEEC
T ss_pred EEEcCCCeEeEEEEEEECCCCceEEEEECCCChhhhcCHHHHHHHHHHHHhcCCCCCEEEEeC--C--eEEEEeeCCccC
Confidence 3567778889999998865 4778888874322111112477777777754445 45666552 2 359999987544
No 429
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=96.60 E-value=0.0021 Score=66.43 Aligned_cols=73 Identities=14% Similarity=0.160 Sum_probs=42.6
Q ss_pred ceeeccCccEEEEEEeCC---------CcEEEEEEeccccccHHHHHHHHHHhCCCCCCCC-cceeEEEEeCCeeeEEEe
Q 006982 311 NIIGSGRTGTMYKALLED---------GTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRNL-VPLLGFCMAKKERLLVYK 380 (623)
Q Consensus 311 ~~lG~G~~g~Vy~~~~~~---------~~~vavK~~~~~~~~~~~~~~e~~~l~~l~h~ni-v~l~~~~~~~~~~~lV~e 380 (623)
..++.|....+|+....+ +..+++|+.............|.+++..+....+ .++++.. . .++|+|
T Consensus 39 ~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~~~~~~~~~E~~~l~~L~~~g~~P~~~~~~--~--~~~v~e 114 (369)
T 3c5i_A 39 KQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHVDELYNTISEFEVYKTMSKYKIAPQLLNTF--N--GGRIEE 114 (369)
T ss_dssp EEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTGGGTSCHHHHHHHHHHHHHTTSSCCEEEEE--T--TEEEEE
T ss_pred EEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCccceecHHHHHHHHHHHHhcCCCCceEEec--C--CcEEEE
Confidence 456778888999998754 2678888875432221123567777766643333 3555443 2 378999
Q ss_pred cCCCCCH
Q 006982 381 HMPNGSL 387 (623)
Q Consensus 381 ~~~~gsL 387 (623)
|++|.++
T Consensus 115 ~i~G~~l 121 (369)
T 3c5i_A 115 WLYGDPL 121 (369)
T ss_dssp CCCSEEC
T ss_pred EecCCcC
Confidence 9987543
No 430
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=96.54 E-value=0.0054 Score=63.48 Aligned_cols=142 Identities=14% Similarity=0.169 Sum_probs=81.9
Q ss_pred ceeeccCccEEEEEEeC--------CCcEEEEEEeccccccHHHHHHHHHHhCCCCCCCC-cceeEEEEeCCeeeEEEec
Q 006982 311 NIIGSGRTGTMYKALLE--------DGTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRNL-VPLLGFCMAKKERLLVYKH 381 (623)
Q Consensus 311 ~~lG~G~~g~Vy~~~~~--------~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~h~ni-v~l~~~~~~~~~~~lV~e~ 381 (623)
+.+..|-...+|+.... ++..+++|+..........+.+|.++++.+....+ .++++++.+ .+|+||
T Consensus 56 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~~~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~~----g~v~e~ 131 (379)
T 3feg_A 56 YPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAILQGVDSLVLESVMFAILAERSLGPQLYGVFPE----GRLEQY 131 (379)
T ss_dssp EEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC---CCHHHHHHHHHHHHHHHHTTSSCCEEEEETT----EEEEEC
T ss_pred EEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCccchHHHHHHHHHHHHHHHhcCCCCeEEEEcCC----ccEEEE
Confidence 45666778899998875 34788999864433345566789888877743333 455655432 299999
Q ss_pred CCCCCHhhh-----------------ccCCCC-CCCccC--hHHHHHHHHHHH-------------------HHHHHHHh
Q 006982 382 MPNGSLYDL-----------------LHPADD-TGKSVD--WPRRLKIAIGAA-------------------RGFAWLHH 422 (623)
Q Consensus 382 ~~~gsL~~~-----------------l~~~~~-~~~~l~--~~~~~~i~~~ia-------------------~~l~yLH~ 422 (623)
++|.+|..- ||.... .+.... |.+..++..++. ..+..|.+
T Consensus 132 i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~ 211 (379)
T 3feg_A 132 IPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDEMGNLRK 211 (379)
T ss_dssp CSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHHHHHHHHH
T ss_pred ecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHHHHHHHHH
Confidence 998655311 122211 112222 344444443332 12333322
Q ss_pred ----c-CCCCcEecCCCCCceeeCCC----CCeEEeecccccc
Q 006982 423 ----N-CNPRIIHRNISSKCILLDDD----FEPKISDFGLARL 456 (623)
Q Consensus 423 ----~-~~~~i~H~dlk~~NILl~~~----~~~kl~Dfgla~~ 456 (623)
. ....++|+|+.+.||+++.+ +.+.++||..+..
T Consensus 212 ~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~~ 254 (379)
T 3feg_A 212 LLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSSY 254 (379)
T ss_dssp HHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCEE
T ss_pred HHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCCc
Confidence 1 22368999999999999876 7899999988763
No 431
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=96.35 E-value=0.0006 Score=62.22 Aligned_cols=85 Identities=12% Similarity=0.055 Sum_probs=57.6
Q ss_pred CcEEEEEecCCCceeeCCccccCCCCCCEEEcCCCC-CCCCCChhHhhh---cCCCCEEEccCcc-CCCCCCCCCCCCCC
Q 006982 80 NRVLNLRLTDMGLKGQFPRGIRNCSSMTGLDLSSNK-LYGPLPDDISKL---VGFLTSLDLSSNN-FSGSIPSNLANCTY 154 (623)
Q Consensus 80 ~~v~~l~l~~~~l~g~~p~~l~~l~~L~~L~L~~N~-l~g~ip~~~~~l---~~~L~~L~L~~N~-l~g~ip~~~~~l~~ 154 (623)
-+++.|||+++.++..--..+..|++|+.|+|+++. ++..-=..++.+ .++|++|+|+++. +|..-=..+.++++
T Consensus 61 ~~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~ 140 (176)
T 3e4g_A 61 YKIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRN 140 (176)
T ss_dssp CCEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTT
T ss_pred ceEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCC
Confidence 468999999988765434557889999999999974 664211223331 1248999998864 66322234677888
Q ss_pred CceeeccCCc
Q 006982 155 LNSLKLDHNR 164 (623)
Q Consensus 155 L~~l~l~~N~ 164 (623)
|++|+|++..
T Consensus 141 L~~L~L~~c~ 150 (176)
T 3e4g_A 141 LKYLFLSDLP 150 (176)
T ss_dssp CCEEEEESCT
T ss_pred CCEEECCCCC
Confidence 8888888764
No 432
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=96.32 E-value=0.0051 Score=64.33 Aligned_cols=95 Identities=16% Similarity=0.228 Sum_probs=63.3
Q ss_pred EEEEEecCCCceeeCCccccCCCCCCEEEcCCCCCCCCCChhHhhhcCCCCEEEccCccCCCCCC-CCCCCCCCCceeec
Q 006982 82 VLNLRLTDMGLKGQFPRGIRNCSSMTGLDLSSNKLYGPLPDDISKLVGFLTSLDLSSNNFSGSIP-SNLANCTYLNSLKL 160 (623)
Q Consensus 82 v~~l~l~~~~l~g~~p~~l~~l~~L~~L~L~~N~l~g~ip~~~~~l~~~L~~L~L~~N~l~g~ip-~~~~~l~~L~~l~l 160 (623)
+..+.|.+ ++.-.-+..|.+|++|+.++|++|++. .||...+.. ..|+.+.|.+| ++ .|+ ..|.++++|+.++|
T Consensus 159 L~~i~lp~-~l~~I~~~aF~~c~~L~~l~l~~n~l~-~I~~~aF~~-~~L~~l~lp~~-l~-~I~~~aF~~~~~L~~l~l 233 (401)
T 4fdw_A 159 VQEIVFPS-TLEQLKEDIFYYCYNLKKADLSKTKIT-KLPASTFVY-AGIEEVLLPVT-LK-EIGSQAFLKTSQLKTIEI 233 (401)
T ss_dssp CCEEECCT-TCCEECSSTTTTCTTCCEEECTTSCCS-EECTTTTTT-CCCSEEECCTT-CC-EECTTTTTTCTTCCCEEC
T ss_pred ceEEEeCC-CccEehHHHhhCcccCCeeecCCCcce-EechhhEee-cccCEEEeCCc-hh-eehhhHhhCCCCCCEEec
Confidence 55666664 555555567888888888888888888 677776665 44888888744 66 444 45778888888888
Q ss_pred cCCcCCCCCCc-ccccccccccccc
Q 006982 161 DHNRFSGQIPP-QLGQLGRLKSFSV 184 (623)
Q Consensus 161 ~~N~~~g~iP~-~l~~l~~L~~l~l 184 (623)
..| ++ .|+. .+.+ .+|+.+.+
T Consensus 234 ~~~-l~-~I~~~aF~~-~~L~~i~l 255 (401)
T 4fdw_A 234 PEN-VS-TIGQEAFRE-SGITTVKL 255 (401)
T ss_dssp CTT-CC-EECTTTTTT-CCCSEEEE
T ss_pred CCC-cc-Ccccccccc-CCccEEEe
Confidence 765 33 3333 2323 55666665
No 433
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=96.15 E-value=0.0061 Score=63.74 Aligned_cols=102 Identities=14% Similarity=0.192 Sum_probs=50.1
Q ss_pred cEEEEEecCCCceeeCCccccCCCCCCEEEcCCCCCCCCCChhHhhhcCCCCEEEccCccCCC----CCC-CCCCCCCCC
Q 006982 81 RVLNLRLTDMGLKGQFPRGIRNCSSMTGLDLSSNKLYGPLPDDISKLVGFLTSLDLSSNNFSG----SIP-SNLANCTYL 155 (623)
Q Consensus 81 ~v~~l~l~~~~l~g~~p~~l~~l~~L~~L~L~~N~l~g~ip~~~~~l~~~L~~L~L~~N~l~g----~ip-~~~~~l~~L 155 (623)
.+..|.|+++ ++-.-...|.+ .+|+.++| .|++. .|+...+.-..+|+.++|.+|.+.. .|+ ..|.+|++|
T Consensus 227 ~L~~l~l~~~-l~~I~~~aF~~-~~L~~i~l-p~~i~-~I~~~aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L 302 (401)
T 4fdw_A 227 QLKTIEIPEN-VSTIGQEAFRE-SGITTVKL-PNGVT-NIASRAFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKL 302 (401)
T ss_dssp TCCCEECCTT-CCEECTTTTTT-CCCSEEEE-ETTCC-EECTTTTTTCTTCCEEEEESSCCCCCTTCEECTTTTTTCTTC
T ss_pred CCCEEecCCC-ccCcccccccc-CCccEEEe-CCCcc-EEChhHhhCCCCCCEEEeCCccccCCcccEECHHHhhCCccC
Confidence 3555666542 33333333444 56666666 33344 3443333223346666666665541 122 345666666
Q ss_pred ceeeccCCcCCCCCCccccccccccccccccc
Q 006982 156 NSLKLDHNRFSGQIPPQLGQLGRLKSFSVANN 187 (623)
Q Consensus 156 ~~l~l~~N~~~g~iP~~l~~l~~L~~l~l~~N 187 (623)
+.++|. |+++-.-...+.++++|+.+.|.+|
T Consensus 303 ~~l~l~-~~i~~I~~~aF~~c~~L~~l~lp~~ 333 (401)
T 4fdw_A 303 ARFEIP-ESIRILGQGLLGGNRKVTQLTIPAN 333 (401)
T ss_dssp CEECCC-TTCCEECTTTTTTCCSCCEEEECTT
T ss_pred CeEEeC-CceEEEhhhhhcCCCCccEEEECcc
Confidence 666666 3344222334555666666666443
No 434
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=95.74 E-value=0.00076 Score=61.52 Aligned_cols=92 Identities=11% Similarity=0.136 Sum_probs=61.2
Q ss_pred CCccccCCCCCCEEEcCCCCCCCCCChhHhhhcCCCCEEEccCcc-CCCCCCCCCCCC----CCCceeeccCCc-CCCCC
Q 006982 96 FPRGIRNCSSMTGLDLSSNKLYGPLPDDISKLVGFLTSLDLSSNN-FSGSIPSNLANC----TYLNSLKLDHNR-FSGQI 169 (623)
Q Consensus 96 ~p~~l~~l~~L~~L~L~~N~l~g~ip~~~~~l~~~L~~L~L~~N~-l~g~ip~~~~~l----~~L~~l~l~~N~-~~g~i 169 (623)
+|...-.--+|+.|||+++.++..=-..+..+ ++|+.|+|+++. ++..-=..++.+ ++|++|+|+++. +|..=
T Consensus 53 LP~~~~~~~~L~~LDLs~~~Itd~GL~~L~~~-~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~G 131 (176)
T 3e4g_A 53 LPTGPLDKYKIQAIDATDSCIMSIGFDHMEGL-QYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKG 131 (176)
T ss_dssp SCCCSTTCCCEEEEEEESCCCCGGGGGGGTTC-SCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHH
T ss_pred CCcccCCCceEeEEeCcCCCccHHHHHHhcCC-CCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHH
Confidence 45433233479999999998764322345554 459999999985 653222234553 479999999974 66322
Q ss_pred Ccccccccccccccccccc
Q 006982 170 PPQLGQLGRLKSFSVANNL 188 (623)
Q Consensus 170 P~~l~~l~~L~~l~l~~N~ 188 (623)
=..+.++++|+.|+|++..
T Consensus 132 l~~L~~~~~L~~L~L~~c~ 150 (176)
T 3e4g_A 132 IIALHHFRNLKYLFLSDLP 150 (176)
T ss_dssp HHHGGGCTTCCEEEEESCT
T ss_pred HHHHhcCCCCCEEECCCCC
Confidence 2356788999999998764
No 435
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=95.67 E-value=0.029 Score=57.11 Aligned_cols=32 Identities=19% Similarity=0.229 Sum_probs=28.2
Q ss_pred CCcEecCCCCCceeeCCCCCeEEeeccccccc
Q 006982 426 PRIIHRNISSKCILLDDDFEPKISDFGLARLM 457 (623)
Q Consensus 426 ~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~ 457 (623)
..++|+|+.+.||++++++.+.|.||+.+..-
T Consensus 206 ~~~~HgD~~~~N~l~~~~~~~~~iD~e~~~~~ 237 (339)
T 3i1a_A 206 YVLCHSDIHAGNVLVGNEESIYIIDWDEPMLA 237 (339)
T ss_dssp CEEECSCCCGGGEEECGGGCEEECCCSSCEEE
T ss_pred ceeEeCCCCcCCEEEeCCCeEEEEECCCCeeC
Confidence 46999999999999998888999999887653
No 436
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=95.59 E-value=0.0014 Score=60.95 Aligned_cols=83 Identities=13% Similarity=0.180 Sum_probs=47.0
Q ss_pred CcEEEEEecCC-Ccee----eCCccccCCCCCCEEEcCCCCCCCC----CChhHhhhcCCCCEEEccCccCCCCC----C
Q 006982 80 NRVLNLRLTDM-GLKG----QFPRGIRNCSSMTGLDLSSNKLYGP----LPDDISKLVGFLTSLDLSSNNFSGSI----P 146 (623)
Q Consensus 80 ~~v~~l~l~~~-~l~g----~~p~~l~~l~~L~~L~L~~N~l~g~----ip~~~~~l~~~L~~L~L~~N~l~g~i----p 146 (623)
..++.|+|+++ ++.. .+-..+..-+.|+.|+|++|.+... |-..+.... .|+.|+|++|+|+..- -
T Consensus 41 ~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~-tL~~L~L~~N~Ig~~Ga~ala 119 (197)
T 1pgv_A 41 TDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSP-SLRVLNVESNFLTPELLARLL 119 (197)
T ss_dssp SSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCS-SCCEEECCSSBCCHHHHHHHH
T ss_pred CCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCC-ccCeEecCCCcCCHHHHHHHH
Confidence 45677777764 5432 2344556667777777777777632 222222322 3777777777776321 1
Q ss_pred CCCCCCCCCceeeccCC
Q 006982 147 SNLANCTYLNSLKLDHN 163 (623)
Q Consensus 147 ~~~~~l~~L~~l~l~~N 163 (623)
..+..-+.|+.|+|++|
T Consensus 120 ~aL~~N~tL~~L~L~n~ 136 (197)
T 1pgv_A 120 RSTLVTQSIVEFKADNQ 136 (197)
T ss_dssp HHTTTTCCCSEEECCCC
T ss_pred HHHhhCCceeEEECCCC
Confidence 12334455777777654
No 437
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=95.34 E-value=0.043 Score=56.96 Aligned_cols=142 Identities=15% Similarity=0.186 Sum_probs=79.2
Q ss_pred ceeeccCccEEEEEEeCC--------CcEEEEEEecccccc------------H-------HHHHHHHHHhCCCCCCC-C
Q 006982 311 NIIGSGRTGTMYKALLED--------GTSLMVKRLQDSQRS------------E-------KEFVAEMATLGSVKNRN-L 362 (623)
Q Consensus 311 ~~lG~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~------------~-------~~~~~e~~~l~~l~h~n-i 362 (623)
+.|..|-...+|+....+ +..|++++.-..... . .....|.+++..+.... .
T Consensus 58 ~~l~gGlTN~~~~v~~~~~~~~~~~~~~~~llRi~G~~te~~~~~~~~~~~idR~~~~~~~~~~~~E~~~l~~L~~~Gi~ 137 (401)
T 3f2s_A 58 SVIRGGLSNMLFQCSLPDTTATLGDEPRKVLLRLYGAILQMRSCNKEGSEQAQKENEFQGAEAMVLESVMFAILAERSLG 137 (401)
T ss_dssp EEEECSSEEEEEEEECCTTCCCSSSCCSEEEEEEEEC-----------------------CHHHHHHHHHHHHHHHTTSS
T ss_pred EEcCCCccCceEEEEeCCCcccccCCCccEEEEeCCCCcccccccccccchhhhhhhhccchhhHHHHHHHHHHHhcCCC
Confidence 456567778899988654 367888876432110 1 11234777777774333 4
Q ss_pred cceeEEEEeCCeeeEEEecCCCCCHhh--h---------------ccCCC-CCCCccC--hHHHHHHHHHHH--------
Q 006982 363 VPLLGFCMAKKERLLVYKHMPNGSLYD--L---------------LHPAD-DTGKSVD--WPRRLKIAIGAA-------- 414 (623)
Q Consensus 363 v~l~~~~~~~~~~~lV~e~~~~gsL~~--~---------------l~~~~-~~~~~l~--~~~~~~i~~~ia-------- 414 (623)
.++++++.+ .+|+||+++-+|.. + +|... ....... |....++..++.
T Consensus 138 Pkl~~~~~~----G~i~efI~G~~L~~~dl~~p~~~~~iA~~L~~LH~~~~~~~~~~~~l~~~i~~~~~~l~~~~~~~~~ 213 (401)
T 3f2s_A 138 PKLYGIFPQ----GRLEQFIPSRRLDTEELSLPDISAEIAEKMATFHGMKMPFNKEPKWLFGTMEKYLKEVLRIKFTEES 213 (401)
T ss_dssp CCEEEEETT----EEEEECCCEEECCGGGGGSHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSHH
T ss_pred CeEEEEeCC----CeEEEecCCccCCHHHHhhHHHHHHHHHHHHHHhCCCCCCCCCcchHHHHHHHHHHHHHhccCcchh
Confidence 456666532 28999999754421 1 12211 1112223 223333332221
Q ss_pred --------------HHHH----HHHhc-CCCCcEecCCCCCceeeCCC------CCeEEeecccccc
Q 006982 415 --------------RGFA----WLHHN-CNPRIIHRNISSKCILLDDD------FEPKISDFGLARL 456 (623)
Q Consensus 415 --------------~~l~----yLH~~-~~~~i~H~dlk~~NILl~~~------~~~kl~Dfgla~~ 456 (623)
.-+. +|... ....++|+|+.+.||+++++ +.+.++||..+..
T Consensus 214 ~~~~~~~~~~~~l~~e~~~l~~~l~~~~~~~v~~H~Dl~~~Nil~~~~~~~~~~~~~~lID~E~a~~ 280 (401)
T 3f2s_A 214 RIKKLHKLLSYNLPLELENLRSLLESTPSPVVFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHTSCCCEEEECSCCCGGGEEEETTGGGCSSSCEEECCCTTCEE
T ss_pred hhhhhhhhhhHHHHHHHHHHHHHHhhcCCCeeEEeccCCcccEEEcCCcccCcccceEEEeeccCCc
Confidence 1122 23222 22368999999999999877 7899999987753
No 438
>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A
Probab=95.12 E-value=0.22 Score=46.61 Aligned_cols=100 Identities=14% Similarity=0.109 Sum_probs=65.4
Q ss_pred CCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCCCCCc
Q 006982 384 NGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTH 463 (623)
Q Consensus 384 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~~~~~ 463 (623)
.-||.+.|.. .+.++++.++|.++.|.+.+|.-+-.+..+ ..+=+.|..|++..+|.+...+ ..+. .
T Consensus 32 ~vSL~eIL~~---~~~PlsEEqaWALc~Qc~~~L~~~~~~~~~--~~~i~~~~~i~l~~dG~V~f~~-~~s~------~- 98 (229)
T 2yle_A 32 ALSLEEILRL---YNQPINEEQAWAVCYQCCGSLRAAARRRQP--RHRVRSAAQIRVWRDGAVTLAP-AADD------A- 98 (229)
T ss_dssp EEEHHHHHHH---HTSCCCHHHHHHHHHHHHHHHHHHHHTTCC--CCCCCSGGGEEEETTSCEEECC-C-----------
T ss_pred cccHHHHHHH---cCCCcCHHHHHHHHHHHHHHHHhhhhcccC--CceecCCcceEEecCCceeccc-cccc------c-
Confidence 3478888864 347899999999999999988766221111 1233456889999999998764 1110 0
Q ss_pred ccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHh
Q 006982 464 LSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVT 506 (623)
Q Consensus 464 ~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~ellt 506 (623)
....+.|||... ...+.+.=|||+|+++|.-+-
T Consensus 99 ---------~~~~~~~pe~~~-~~~te~~~IysLG~tLY~ALD 131 (229)
T 2yle_A 99 ---------GEPPPVAGKLGY-SQCMETEVIESLGIIIYKALD 131 (229)
T ss_dssp -----------------CCSS-SSSCHHHHHHHHHHHHHHHHT
T ss_pred ---------cccCCCChhhcc-ccchHHHHHHHHHHHHHHHhh
Confidence 122366888764 345788999999999999885
No 439
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=94.20 E-value=0.056 Score=56.62 Aligned_cols=73 Identities=11% Similarity=0.102 Sum_probs=45.8
Q ss_pred ceeeccCccEEEEEEeCC--------CcEEEEEEeccccccHHHHHHHHHHhCCCCCCCC-cceeEEEEeCCeeeEEEec
Q 006982 311 NIIGSGRTGTMYKALLED--------GTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRNL-VPLLGFCMAKKERLLVYKH 381 (623)
Q Consensus 311 ~~lG~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~~~~~~~e~~~l~~l~h~ni-v~l~~~~~~~~~~~lV~e~ 381 (623)
+.+..|-...+|+....+ +..+++|+........-...+|.+++..+....+ .++++.+ . .+.|+||
T Consensus 76 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t~~~idR~~E~~~l~~L~~~gi~P~l~~~~--~--~~~I~ef 151 (424)
T 3mes_A 76 KQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHVGKFYDSKVELDVFRYLSNINIAPNIIADF--P--EGRIEEF 151 (424)
T ss_dssp EEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC-CCCCHHHHHHHHHHHHHTTSSCCEEEEE--T--TEEEEEC
T ss_pred EEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCcchhcCHHHHHHHHHHHHhcCCCCCEEEEc--C--CCEEEEE
Confidence 456667788999998763 5788888865432211223567777766643233 4455432 2 3789999
Q ss_pred CCCCCH
Q 006982 382 MPNGSL 387 (623)
Q Consensus 382 ~~~gsL 387 (623)
++|.+|
T Consensus 152 I~G~~l 157 (424)
T 3mes_A 152 IDGEPL 157 (424)
T ss_dssp CCSEEC
T ss_pred eCCccC
Confidence 998654
No 440
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=93.68 E-value=0.008 Score=55.77 Aligned_cols=88 Identities=10% Similarity=0.153 Sum_probs=58.4
Q ss_pred cccCCCCCCEEEcCCC-CCCCC----CChhHhhhcCCCCEEEccCccCCCCCCCC----CCCCCCCceeeccCCcCCCC-
Q 006982 99 GIRNCSSMTGLDLSSN-KLYGP----LPDDISKLVGFLTSLDLSSNNFSGSIPSN----LANCTYLNSLKLDHNRFSGQ- 168 (623)
Q Consensus 99 ~l~~l~~L~~L~L~~N-~l~g~----ip~~~~~l~~~L~~L~L~~N~l~g~ip~~----~~~l~~L~~l~l~~N~~~g~- 168 (623)
-+.+-+.|+.|+|++| .+... |-..+.... .|+.|+|++|++...--.. +..-+.|++|+|++|+|+..
T Consensus 36 ll~~n~~L~~L~L~~nn~igd~ga~~la~aL~~N~-~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~G 114 (197)
T 1pgv_A 36 LREDDTDLKEVNINNMKRVSKERIRSLIEAACNSK-HIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPEL 114 (197)
T ss_dssp HHTTCSSCCEEECTTCCSSCHHHHHHHHHHHTTCS-CCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHH
T ss_pred HHhcCCCccEEECCCCCCCCHHHHHHHHHHHhhCC-CcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHH
Confidence 3556788999999986 66521 222233323 4999999999998322222 33457899999999999842
Q ss_pred ---CCccccccccccccccccc
Q 006982 169 ---IPPQLGQLGRLKSFSVANN 187 (623)
Q Consensus 169 ---iP~~l~~l~~L~~l~l~~N 187 (623)
|-..+..-+.|+.|+|++|
T Consensus 115 a~ala~aL~~N~tL~~L~L~n~ 136 (197)
T 1pgv_A 115 LARLLRSTLVTQSIVEFKADNQ 136 (197)
T ss_dssp HHHHHHHTTTTCCCSEEECCCC
T ss_pred HHHHHHHHhhCCceeEEECCCC
Confidence 1223334466899999865
No 441
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=91.60 E-value=0.3 Score=50.08 Aligned_cols=82 Identities=12% Similarity=0.244 Sum_probs=33.0
Q ss_pred cccCCCCCCEEEcCCCCCCCCCChhHhhhcCCCCEEEccCccCCCCCC-CCCCCCCCCceeeccCCcCCCCCCccccccc
Q 006982 99 GIRNCSSMTGLDLSSNKLYGPLPDDISKLVGFLTSLDLSSNNFSGSIP-SNLANCTYLNSLKLDHNRFSGQIPPQLGQLG 177 (623)
Q Consensus 99 ~l~~l~~L~~L~L~~N~l~g~ip~~~~~l~~~L~~L~L~~N~l~g~ip-~~~~~l~~L~~l~l~~N~~~g~iP~~l~~l~ 177 (623)
.+.++.+|+.+.+..+ +. .|+.....-...|+.+.+..+ ++ .|+ ..+.++++|+.+.+.+|.++-.=+..+.++.
T Consensus 235 ~f~~~~~L~~i~lp~~-v~-~I~~~aF~~~~~l~~i~l~~~-i~-~i~~~aF~~c~~L~~i~l~~~~i~~I~~~aF~~c~ 310 (379)
T 4h09_A 235 AFYGMKALDEIAIPKN-VT-SIGSFLLQNCTALKTLNFYAK-VK-TVPYLLCSGCSNLTKVVMDNSAIETLEPRVFMDCV 310 (379)
T ss_dssp TTTTCSSCCEEEECTT-CC-EECTTTTTTCTTCCEEEECCC-CS-EECTTTTTTCTTCCEEEECCTTCCEECTTTTTTCT
T ss_pred cccCCccceEEEcCCC-cc-EeCccccceeehhcccccccc-ce-eccccccccccccccccccccccceehhhhhcCCC
Confidence 3444555555555443 22 232222221223444444332 22 222 2344445555555544444411122344444
Q ss_pred ccccccc
Q 006982 178 RLKSFSV 184 (623)
Q Consensus 178 ~L~~l~l 184 (623)
+|+.+.|
T Consensus 311 ~L~~i~l 317 (379)
T 4h09_A 311 KLSSVTL 317 (379)
T ss_dssp TCCEEEC
T ss_pred CCCEEEc
Confidence 4544444
No 442
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=89.77 E-value=0.27 Score=50.84 Aligned_cols=102 Identities=16% Similarity=0.337 Sum_probs=72.1
Q ss_pred cEEEEEecCCCceeeCCccccCCCCCCEEEcCCCCCCCCCChhHhhhcCCCCEEEccCccCCCCCC-CCCCCCCCCceee
Q 006982 81 RVLNLRLTDMGLKGQFPRGIRNCSSMTGLDLSSNKLYGPLPDDISKLVGFLTSLDLSSNNFSGSIP-SNLANCTYLNSLK 159 (623)
Q Consensus 81 ~v~~l~l~~~~l~g~~p~~l~~l~~L~~L~L~~N~l~g~ip~~~~~l~~~L~~L~L~~N~l~g~ip-~~~~~l~~L~~l~ 159 (623)
.+..+.+.++-. -.-...+.++++|+.+++. +.+. .|+...+.-..+|+.++|..| ++ .|. ..|.+|++|+.+.
T Consensus 266 ~L~~i~lp~~~~-~I~~~aF~~c~~L~~i~l~-~~i~-~I~~~aF~~c~~L~~i~lp~~-v~-~I~~~aF~~C~~L~~i~ 340 (394)
T 4gt6_A 266 YLASVKMPDSVV-SIGTGAFMNCPALQDIEFS-SRIT-ELPESVFAGCISLKSIDIPEG-IT-QILDDAFAGCEQLERIA 340 (394)
T ss_dssp SCCEEECCTTCC-EECTTTTTTCTTCCEEECC-TTCC-EECTTTTTTCTTCCEEECCTT-CC-EECTTTTTTCTTCCEEE
T ss_pred cccEEecccccc-eecCcccccccccccccCC-Cccc-ccCceeecCCCCcCEEEeCCc-cc-EehHhHhhCCCCCCEEE
Confidence 345566654332 2334467889999999996 4555 577665544456999999865 55 454 4688999999999
Q ss_pred ccCCcCCCCCC-ccccccccccccccccccc
Q 006982 160 LDHNRFSGQIP-PQLGQLGRLKSFSVANNLL 189 (623)
Q Consensus 160 l~~N~~~g~iP-~~l~~l~~L~~l~l~~N~l 189 (623)
|..| ++ .|+ .++.++++|+.+++.+|..
T Consensus 341 ip~s-v~-~I~~~aF~~C~~L~~i~~~~~~~ 369 (394)
T 4gt6_A 341 IPSS-VT-KIPESAFSNCTALNNIEYSGSRS 369 (394)
T ss_dssp ECTT-CC-BCCGGGGTTCTTCCEEEESSCHH
T ss_pred ECcc-cC-EEhHhHhhCCCCCCEEEECCcee
Confidence 9755 55 454 5788999999999988754
No 443
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=89.49 E-value=0.31 Score=50.40 Aligned_cols=84 Identities=19% Similarity=0.292 Sum_probs=62.3
Q ss_pred ccccCCCCCCEEEcCCCCCCCCCChhHhhhcCCCCEEEccCccCCCCCC-CCCCCCCCCceeeccCCcCCCCC-Cccccc
Q 006982 98 RGIRNCSSMTGLDLSSNKLYGPLPDDISKLVGFLTSLDLSSNNFSGSIP-SNLANCTYLNSLKLDHNRFSGQI-PPQLGQ 175 (623)
Q Consensus 98 ~~l~~l~~L~~L~L~~N~l~g~ip~~~~~l~~~L~~L~L~~N~l~g~ip-~~~~~l~~L~~l~l~~N~~~g~i-P~~l~~ 175 (623)
..+..+.+|+.+.+..+ +. .|+...+.-..+|+.++|.++ ++ .|+ ..|.+|++|+.+.|..| ++ .| ..++.+
T Consensus 291 ~~F~~~~~L~~i~l~~~-i~-~I~~~aF~~c~~L~~i~lp~~-v~-~I~~~aF~~c~~L~~i~lp~~-l~-~I~~~aF~~ 364 (394)
T 4fs7_A 291 KTFYGCSSLTEVKLLDS-VK-FIGEEAFESCTSLVSIDLPYL-VE-EIGKRSFRGCTSLSNINFPLS-LR-KIGANAFQG 364 (394)
T ss_dssp TTTTTCTTCCEEEECTT-CC-EECTTTTTTCTTCCEECCCTT-CC-EECTTTTTTCTTCCEECCCTT-CC-EECTTTBTT
T ss_pred ccccccccccccccccc-cc-eechhhhcCCCCCCEEEeCCc-cc-EEhHHhccCCCCCCEEEECcc-cc-EehHHHhhC
Confidence 35778999999999765 55 566554433345999999754 66 554 56889999999999877 55 34 457888
Q ss_pred cccccccccccc
Q 006982 176 LGRLKSFSVANN 187 (623)
Q Consensus 176 l~~L~~l~l~~N 187 (623)
+++|+.+++..|
T Consensus 365 C~~L~~i~lp~~ 376 (394)
T 4fs7_A 365 CINLKKVELPKR 376 (394)
T ss_dssp CTTCCEEEEEGG
T ss_pred CCCCCEEEECCC
Confidence 999999988655
No 444
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=88.97 E-value=0.67 Score=47.76 Aligned_cols=85 Identities=13% Similarity=0.338 Sum_probs=61.7
Q ss_pred CccccCCCCCCEEEcCCCCCCCCCChhHhhhcCCCCEEEccCccCCCCCCC-CCCCCCCCceeeccCCcCCCCC-Ccccc
Q 006982 97 PRGIRNCSSMTGLDLSSNKLYGPLPDDISKLVGFLTSLDLSSNNFSGSIPS-NLANCTYLNSLKLDHNRFSGQI-PPQLG 174 (623)
Q Consensus 97 p~~l~~l~~L~~L~L~~N~l~g~ip~~~~~l~~~L~~L~L~~N~l~g~ip~-~~~~l~~L~~l~l~~N~~~g~i-P~~l~ 174 (623)
...+.++.+|+.+.+..+... |+.....-...|+.+.+. +.++ .|+. .|.+|++|+.++|..| ++ .| ..++.
T Consensus 258 ~~aF~~c~~L~~i~lp~~~~~--I~~~aF~~c~~L~~i~l~-~~i~-~I~~~aF~~c~~L~~i~lp~~-v~-~I~~~aF~ 331 (394)
T 4gt6_A 258 THAFDSCAYLASVKMPDSVVS--IGTGAFMNCPALQDIEFS-SRIT-ELPESVFAGCISLKSIDIPEG-IT-QILDDAFA 331 (394)
T ss_dssp TTTTTTCSSCCEEECCTTCCE--ECTTTTTTCTTCCEEECC-TTCC-EECTTTTTTCTTCCEEECCTT-CC-EECTTTTT
T ss_pred cceeeecccccEEecccccce--ecCcccccccccccccCC-Cccc-ccCceeecCCCCcCEEEeCCc-cc-EehHhHhh
Confidence 446888999999999876543 444433334559999996 4566 4554 6889999999999865 54 34 45788
Q ss_pred ccccccccccccc
Q 006982 175 QLGRLKSFSVANN 187 (623)
Q Consensus 175 ~l~~L~~l~l~~N 187 (623)
++.+|+.+.+..+
T Consensus 332 ~C~~L~~i~ip~s 344 (394)
T 4gt6_A 332 GCEQLERIAIPSS 344 (394)
T ss_dssp TCTTCCEEEECTT
T ss_pred CCCCCCEEEECcc
Confidence 8999999988654
No 445
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=88.85 E-value=1.1 Score=46.44 Aligned_cols=29 Identities=21% Similarity=0.326 Sum_probs=24.8
Q ss_pred cEecCCCCCceee------CCCCCeEEeecccccc
Q 006982 428 IIHRNISSKCILL------DDDFEPKISDFGLARL 456 (623)
Q Consensus 428 i~H~dlk~~NILl------~~~~~~kl~Dfgla~~ 456 (623)
++|+|+.+.||++ +++..++++||.+|..
T Consensus 246 fcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~~ 280 (401)
T 3g15_A 246 FCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp EECSCCCGGGEEEETTGGGCSSCCEEECCCTTCEE
T ss_pred eEEecCCCCeEEEecCcccCcCCeEEEechHhccC
Confidence 5799999999999 4567799999988764
No 446
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=88.69 E-value=0.14 Score=34.39 Aligned_cols=31 Identities=23% Similarity=0.329 Sum_probs=16.2
Q ss_pred CCccceeeehhhhHHHHHHHHHHhheeeeeee
Q 006982 227 PHTGVIAGAAIGGVTFAALVVGIVMFFYFRRM 258 (623)
Q Consensus 227 ~~~~~i~~~~i~~v~~~~l~~~i~~~~~~~r~ 258 (623)
+.+..|++.+++++++.+++++. +++++||+
T Consensus 8 s~~~~IA~gVVgGv~~~~ii~~~-~~~~~RRr 38 (44)
T 2ks1_B 8 PKIPSIATGMVGALLLLLVVALG-IGLFMRRR 38 (44)
T ss_dssp SCSSSSTHHHHHHHHHHHHHHHH-HHHHHHTT
T ss_pred CCcceEEeehhHHHHHHHHHHHH-HHHHhhhh
Confidence 44555666666666655544433 33444443
No 447
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=87.69 E-value=0.48 Score=48.92 Aligned_cols=84 Identities=19% Similarity=0.175 Sum_probs=61.3
Q ss_pred CCccccCCCCCCEEEcCCCCCCCCCChhHhhhcCCCCEEEccCccCCCCCC-CCCCCCCCCceeeccCCcCCCCC-Cccc
Q 006982 96 FPRGIRNCSSMTGLDLSSNKLYGPLPDDISKLVGFLTSLDLSSNNFSGSIP-SNLANCTYLNSLKLDHNRFSGQI-PPQL 173 (623)
Q Consensus 96 ~p~~l~~l~~L~~L~L~~N~l~g~ip~~~~~l~~~L~~L~L~~N~l~g~ip-~~~~~l~~L~~l~l~~N~~~g~i-P~~l 173 (623)
-...+.++..|+.+.+..+. ||........+|+.+.+.+| ++ .|+ ..|.++++|+.++|.++ ++ .| ..++
T Consensus 268 ~~~~F~~~~~l~~~~~~~~~----i~~~~F~~~~~L~~i~l~~~-i~-~I~~~aF~~c~~L~~i~lp~~-v~-~I~~~aF 339 (394)
T 4fs7_A 268 GGSLFYNCSGLKKVIYGSVI----VPEKTFYGCSSLTEVKLLDS-VK-FIGEEAFESCTSLVSIDLPYL-VE-EIGKRSF 339 (394)
T ss_dssp CSCTTTTCTTCCEEEECSSE----ECTTTTTTCTTCCEEEECTT-CC-EECTTTTTTCTTCCEECCCTT-CC-EECTTTT
T ss_pred eccccccccccceeccCcee----eccccccccccccccccccc-cc-eechhhhcCCCCCCEEEeCCc-cc-EEhHHhc
Confidence 34467889999999888764 44443333455999999765 55 454 46889999999999754 55 45 4578
Q ss_pred cccccccccccccc
Q 006982 174 GQLGRLKSFSVANN 187 (623)
Q Consensus 174 ~~l~~L~~l~l~~N 187 (623)
.++++|+.+.+..|
T Consensus 340 ~~c~~L~~i~lp~~ 353 (394)
T 4fs7_A 340 RGCTSLSNINFPLS 353 (394)
T ss_dssp TTCTTCCEECCCTT
T ss_pred cCCCCCCEEEECcc
Confidence 88999999988765
No 448
>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}
Probab=87.06 E-value=1.2 Score=41.44 Aligned_cols=116 Identities=9% Similarity=0.098 Sum_probs=77.4
Q ss_pred CCCCCcceeEEEEeCCeeeEEEecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCc
Q 006982 358 KNRNLVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKC 437 (623)
Q Consensus 358 ~h~niv~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~N 437 (623)
.||++++. .+-.+.+...+.|+.-+.+.=+..+ ..++...+++++..++.-..++++ -+|--+.|+|
T Consensus 43 ~~~~Fl~~-~I~e~eD~v~~~y~~~~~~~~f~~i-------k~~~~~eKlr~l~ni~~l~~~~~~-----r~tf~L~P~N 109 (215)
T 4ann_A 43 HSPYFIDA-ELTELRDSFQIHYDINDNHTPFDNI-------KSFTKNEKLRYLLNIKNLEEVNRT-----RYTFVLAPDE 109 (215)
T ss_dssp CCTTBCCE-EEEECSSEEEEEECCCTTSEEGGGG-------GGSCHHHHHHHHHHGGGGGGGGGS-----SEECCCSGGG
T ss_pred cCCcccce-EEEEcccEEEEEEEcCcccCCHHHH-------HhcCHHHHHHHHHHHHHHHHHhcC-----ceEEEEecce
Confidence 58888876 4555566555555544422222223 457788999999999887766654 3788899999
Q ss_pred eeeCCCCCeEEeecccccccCCCCCcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCC
Q 006982 438 ILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTN 512 (623)
Q Consensus 438 ILl~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~ 512 (623)
+++|.++.+++.-.|+-..+.+ . ..++..=.-.+=+++..+++++..|.
T Consensus 110 L~f~~~~~p~i~~RGik~~l~P---------------------~-----~~~ee~fL~qyKAliiall~~K~~Fe 158 (215)
T 4ann_A 110 LFFTRDGLPIAKTRGLQNVVDP---------------------L-----PVSEAEFLTRYKALVICAFNEKQSFD 158 (215)
T ss_dssp EEECTTSCEEESCCEETTTBSC---------------------C-----CCCHHHHHHHHHHHHHHHHCTTCCHH
T ss_pred EEEcCCCCEEEEEccCccCCCC---------------------C-----CCCHHHHHHHHHHHHHHHHcCCCCHH
Confidence 9999999999987776543322 1 01112223347788899999988874
No 449
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=85.75 E-value=0.22 Score=33.35 Aligned_cols=32 Identities=31% Similarity=0.414 Sum_probs=16.7
Q ss_pred CCCccceeeehhhhHHHHHHHHHHhheeeeeee
Q 006982 226 GPHTGVIAGAAIGGVTFAALVVGIVMFFYFRRM 258 (623)
Q Consensus 226 ~~~~~~i~~~~i~~v~~~~l~~~i~~~~~~~r~ 258 (623)
++.+..|++.+++++++.+++++. .++++||+
T Consensus 6 ~s~~~aIA~gVVgGv~~v~ii~~~-~~~~~RRR 37 (44)
T 2l2t_A 6 HARTPLIAAGVIGGLFILVIVGLT-FAVYVRRK 37 (44)
T ss_dssp SCSSHHHHHHHHHHHHHHHHHHHH-HHHHHHTT
T ss_pred CCCcceEEEeehHHHHHHHHHHHH-HHHHhhhh
Confidence 345555666666666655544433 33444443
No 450
>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}
Probab=85.54 E-value=2 Score=40.17 Aligned_cols=114 Identities=13% Similarity=0.184 Sum_probs=75.9
Q ss_pred CCCCCcceeEEEEeCCeeeEEEecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHH-HHHhcCCCCcEecCCCCC
Q 006982 358 KNRNLVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFA-WLHHNCNPRIIHRNISSK 436 (623)
Q Consensus 358 ~h~niv~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~-yLH~~~~~~i~H~dlk~~ 436 (623)
.||++ -...-.+.+...+.|+.-+++.=...+ ..++...+++++..++.-.. +++ .-+|--+.|+
T Consensus 48 ~~~~f--~~~I~~~eD~~~i~y~~~~~~~~f~~i-------~~~~~~eKlrll~nl~~L~~~~~~-----~r~tf~l~P~ 113 (219)
T 4ano_A 48 VDPCI--VRDIDVSEDEVKVVIKPPSSFLTFAAI-------RKTTLLSRIRAAIHLVSKVKHHSA-----RRLIFIVCPE 113 (219)
T ss_dssp SCSSS--EEEEEECSSEEEEEEECCTTCEEHHHH-------HTSCHHHHHHHHHHHHHHHSSCCS-----SSEECCCCGG
T ss_pred cCCCC--CeEEEEeCCEEEEEEEcCcccCcHHHH-------HhcCHHHHHHHHHHHHHHHHHhhh-----CceeEEEeCc
Confidence 57887 444446666766777766454333344 34677889999888887655 444 3578889999
Q ss_pred ceeeCCCCCeEEeecccccccCCCCCcccccccCCCCcccccCcccccCCCCCcchhHH-HHHHHHHHHHhCCCCCC
Q 006982 437 CILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVY-SFGTVLLELVTGERPTN 512 (623)
Q Consensus 437 NILl~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~-sfGvil~elltg~~P~~ 512 (623)
|+++|.++.+++.-.|+-..+ +|.-+ ...|.| .+=+++..++.++..|.
T Consensus 114 NL~f~~~~~p~i~hRGi~~~l---------------------pP~e~------~ee~fl~qyKali~all~~K~~Fe 163 (219)
T 4ano_A 114 NLMFNRALEPFFLHVGVKESL---------------------PPDEW------DDERLLREVKATVLALTEGEYRFD 163 (219)
T ss_dssp GEEECTTCCEEESCCEETTTB---------------------SSCSC------CHHHHHHHHHHHHHHHTTCSSCHH
T ss_pred eEEEeCCCcEEEEEcCCcccC---------------------CCCCC------CHHHHHHHHHHHHHHHHcCCCCHH
Confidence 999999999999877765433 22211 122333 46778888888887764
No 451
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=83.21 E-value=1.6 Score=44.40 Aligned_cols=30 Identities=20% Similarity=0.424 Sum_probs=12.9
Q ss_pred CCEEEccCccCCCCCC-CCCCCCCCCceeecc
Q 006982 131 LTSLDLSSNNFSGSIP-SNLANCTYLNSLKLD 161 (623)
Q Consensus 131 L~~L~L~~N~l~g~ip-~~~~~l~~L~~l~l~ 161 (623)
|+.+++.+|.++ .|+ ..|.+|++|+.+.|.
T Consensus 288 L~~i~l~~~~i~-~I~~~aF~~c~~L~~i~lp 318 (379)
T 4h09_A 288 LTKVVMDNSAIE-TLEPRVFMDCVKLSSVTLP 318 (379)
T ss_dssp CCEEEECCTTCC-EECTTTTTTCTTCCEEECC
T ss_pred cccccccccccc-eehhhhhcCCCCCCEEEcC
Confidence 444444444444 222 234444444444443
No 452
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=79.93 E-value=0.41 Score=32.02 Aligned_cols=28 Identities=25% Similarity=0.463 Sum_probs=11.7
Q ss_pred cceeeehhhhHHHHHHHHHHhheeeeeeec
Q 006982 230 GVIAGAAIGGVTFAALVVGIVMFFYFRRMS 259 (623)
Q Consensus 230 ~~i~~~~i~~v~~~~l~~~i~~~~~~~r~~ 259 (623)
..+++++++ +. .++++++++++|.||++
T Consensus 12 ~~Ia~~vVG-vl-l~vi~~l~~~~~~RRR~ 39 (44)
T 2jwa_A 12 TSIISAVVG-IL-LVVVLGVVFGILIKRRQ 39 (44)
T ss_dssp HHHHHHHHH-HH-HHHHHHHHHHHHHHHHC
T ss_pred cchHHHHHH-HH-HHHHHHHHHHhheehhh
Confidence 345545554 32 33333334444454443
No 453
>2k1k_A Ephrin type-A receptor 1; EPHA1, receptor tyrosine kinase, dimeric transmembrane domain, ATP-binding, glycoprotein, nucleotide-binding; NMR {Homo sapiens} PDB: 2k1l_A
Probab=70.83 E-value=1.3 Score=28.70 Aligned_cols=25 Identities=32% Similarity=0.398 Sum_probs=13.6
Q ss_pred CCccceeeehhhhHHHHHHHHHHhh
Q 006982 227 PHTGVIAGAAIGGVTFAALVVGIVM 251 (623)
Q Consensus 227 ~~~~~i~~~~i~~v~~~~l~~~i~~ 251 (623)
...+.+++++++.++..++++++++
T Consensus 8 ls~GaIAGiVvG~v~gv~li~~l~~ 32 (38)
T 2k1k_A 8 LTGGEIVAVIFGLLLGAALLLGILV 32 (38)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCceeeeehHHHHHHHHHHHHHH
Confidence 3455666666666555544444443
No 454
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=70.38 E-value=0.6 Score=49.44 Aligned_cols=58 Identities=7% Similarity=0.050 Sum_probs=17.0
Q ss_pred ceeeccCccEEEEEEeCC-CcEEEE------EEecccc---ccHHHHHHHHHHhCCCCCCCCcceeEEEEe
Q 006982 311 NIIGSGRTGTMYKALLED-GTSLMV------KRLQDSQ---RSEKEFVAEMATLGSVKNRNLVPLLGFCMA 371 (623)
Q Consensus 311 ~~lG~G~~g~Vy~~~~~~-~~~vav------K~~~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~ 371 (623)
+.|| ||.||+|.+.. ..+||+ |..+... .....+.+|..++...+|||+++.+++...
T Consensus 148 ~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~H~niv~~h~f~~~ 215 (463)
T 3cxl_A 148 EHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIHNFKVH 215 (463)
T ss_dssp TTSS---BCCC---------CCBGGGC-----------------------------------CBCCCEEEE
T ss_pred ccCC---chhhhcccccccCCchhhhhccCccccccccccccccccccccccccccccccccCCCcceEEe
Confidence 4555 99999999764 367888 6665422 223467888999999999999999888654
No 455
>2klu_A T-cell surface glycoprotein CD4; cell membrane, disulfide bond, HOST- virus interaction, immune response, immunoglobulin domain, lipoprotein; NMR {Homo sapiens}
Probab=36.08 E-value=13 Score=26.87 Aligned_cols=23 Identities=35% Similarity=0.641 Sum_probs=12.8
Q ss_pred ehhhhHHHHHHHHHHhheeeeee
Q 006982 235 AAIGGVTFAALVVGIVMFFYFRR 257 (623)
Q Consensus 235 ~~i~~v~~~~l~~~i~~~~~~~r 257 (623)
+++++++..++++++.++++.++
T Consensus 12 ivlGg~~~lll~~glcI~ccvkc 34 (70)
T 2klu_A 12 IVLGGVAGLLLFIGLGIFFSVRS 34 (70)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHS
T ss_pred HHHhHHHHHHHHHHHHHHHhhHH
Confidence 45666666666555555544433
No 456
>2k9y_A Ephrin type-A receptor 2; receptor tyrosine kinase, membrane protein, dimeric transmembrane domain, ephrin receptor, ATP-binding, glycoprotein; NMR {Homo sapiens}
Probab=26.50 E-value=25 Score=22.82 Aligned_cols=11 Identities=27% Similarity=0.528 Sum_probs=4.3
Q ss_pred eeeehhhhHHH
Q 006982 232 IAGAAIGGVTF 242 (623)
Q Consensus 232 i~~~~i~~v~~ 242 (623)
+++.+++++++
T Consensus 15 I~~~vv~Gv~l 25 (41)
T 2k9y_A 15 VIGGVAVGVVL 25 (41)
T ss_dssp HHHHHHHHHHH
T ss_pred EEeehhHHHHH
Confidence 33334444433
No 457
>1cja_A Protein (actin-fragmin kinase); transferase; HET: AMP; 2.90A {Physarum polycephalum} SCOP: d.144.1.3
Probab=20.55 E-value=1.7e+02 Score=28.99 Aligned_cols=136 Identities=12% Similarity=0.095 Sum_probs=68.6
Q ss_pred eeeccCccEEEEEEeCCCcEEEEEEeccccccHHHHHHHHHHhCCCCCCCCcceeEEE--------------E-------
Q 006982 312 IIGSGRTGTMYKALLEDGTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGFC--------------M------- 370 (623)
Q Consensus 312 ~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~--------------~------- 370 (623)
..-.| .+.||.... ++..++||-.. ....+-+..++...-.+.-|+.- ++.+. .
T Consensus 76 ~s~~G-stgvff~~t-d~~~~VVK~s~--~l~~E~l~s~LA~~LGlpiP~~R-iv~~~~~E~~e~~~~L~~~~~~~~~l~ 150 (342)
T 1cja_A 76 RSEKG-TEGLFFVET-ESGVFIVKRST--NIESETFCSLLCMRLGLHAPKVR-VVSSNSEEGTNMLECLAAIDKSFRVIT 150 (342)
T ss_dssp ECCST-TSCEEEEEE-SSCEEEEECCT--THHHHHHHHHHHHHHTCCCCCEE-EEESSSHHHHHHHHHHHHHCSSSCHHH
T ss_pred eccCC-CCCeEEEEe-CCCEEEEeCcH--HHHHHHHHHHHHHHhCCCCCCee-EEeeCcHHHHHHHHHHHHhhhhhHHHH
Confidence 33445 455665555 57788999542 22333444455554445555421 11111 0
Q ss_pred --eCCeeeEEEecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCC-CC-cEecCCCCCceeeCCCCC-
Q 006982 371 --AKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCN-PR-IIHRNISSKCILLDDDFE- 445 (623)
Q Consensus 371 --~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~-~~-i~H~dlk~~NILl~~~~~- 445 (623)
.....+++|+|.+|..|.+.-+... ...+..... -..+-.-++.++...++ .+ +.+..-.+.|||+++++.
T Consensus 151 ~l~~~~~~l~meyv~G~~L~e~~~~~~--~~~f~~~~~--k~LG~Ii~FDi~InN~DR~Pl~W~n~GN~~NIL~~~~n~~ 226 (342)
T 1cja_A 151 TLANQANILLMELVRGITLNKLTTTSA--PEVLTKSTM--QQLGSLMALDVIVNNSDRLPIAWTNEGNLDNIMLSERGAT 226 (342)
T ss_dssp HHTTCSEEEEEECCCEEESTTCCSSSH--HHHSCHHHH--HHHHHHHHHHHHHTCCSSSCSSSCSCCCGGGEEEESBTTC
T ss_pred HhhcccceehhhhcCCCccccchhhhh--hhhcCHHHH--HhhchhheehhhhcCCccCcccccCCCChhheEEeCCCCe
Confidence 0123459999999766655422100 011221111 11222335555555532 12 222335789999987555
Q ss_pred eEEeecccccc
Q 006982 446 PKISDFGLARL 456 (623)
Q Consensus 446 ~kl~Dfgla~~ 456 (623)
+.++|.+.+..
T Consensus 227 ~~~IDhn~af~ 237 (342)
T 1cja_A 227 VVPIDSKIIPL 237 (342)
T ss_dssp EEECSCCCCCC
T ss_pred EEEEcCCcccc
Confidence 88899888854
Done!