BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 006983
         (623 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|O00187|MASP2_HUMAN Mannan-binding lectin serine protease 2 OS=Homo sapiens GN=MASP2
           PE=1 SV=4
          Length = 686

 Score = 34.3 bits (77), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 28/88 (31%), Positives = 41/88 (46%), Gaps = 9/88 (10%)

Query: 279 TERMEYEVRIEDGKLIYKKSGTVLDSTKGPKD------TKWIFVLSTSKTLYVGQKIK-G 331
            E   Y +++ DGK + +  G    S+KG K          +   +T   +Y GQK K G
Sbjct: 396 CEETFYTMKVNDGKYVCEADG-FWTSSKGEKSLPVCEPVCGLSARTTGGRIYGGQKAKPG 454

Query: 332 NFQHSSFLAGGATLSAGRLVVDNGYLKA 359
           +F     + GG T +AG L+ DN  L A
Sbjct: 455 DFPWQVLILGGTT-AAGALLYDNWVLTA 481


>sp|Q05866|GRP78_PLAFO 78 kDa glucose-regulated protein homolog OS=Plasmodium falciparum
           (isolate NF54) PE=3 SV=1
          Length = 655

 Score = 33.9 bits (76), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 22/84 (26%), Positives = 39/84 (46%), Gaps = 8/84 (9%)

Query: 341 GGATLSAGRLVVDNGYLKAIWPHSGHYLPTEENFQAFMS-----FLREHNVDLTNVKKSP 395
           GG T     LV+DNG  +        +L  E+  Q  M      F +++N+DL   K++ 
Sbjct: 224 GGGTFDVSILVIDNGVFEVYATAGNTHLGGEDFDQRVMDYFIKMFKKKNNIDLRTDKRAI 283

Query: 396 E---EEEEVAIKKSKSIHDNPLEV 416
           +   +E E+A +    +H   +E+
Sbjct: 284 QKLRKEVEIAKRNLSVVHSTQIEI 307


>sp|B3DV46|FTSH1_METI4 ATP-dependent zinc metalloprotease FtsH 1 OS=Methylacidiphilum
           infernorum (isolate V4) GN=ftsH1 PE=3 SV=1
          Length = 636

 Score = 33.5 bits (75), Expect = 5.3,   Method: Compositional matrix adjust.
 Identities = 17/42 (40%), Positives = 27/42 (64%)

Query: 371 EENFQAFMSFLREHNVDLTNVKKSPEEEEEVAIKKSKSIHDN 412
           EEN+Q  +S LR H+V+L  V K   ++E +  ++ KSI +N
Sbjct: 580 EENYQRALSILRHHHVELKEVTKYLLQKETLNAEEFKSILEN 621


>sp|Q9I596|NCASE_PSEAE Neutral ceramidase OS=Pseudomonas aeruginosa (strain ATCC 15692 /
           PAO1 / 1C / PRS 101 / LMG 12228) GN=PA0845 PE=1 SV=1
          Length = 670

 Score = 32.7 bits (73), Expect = 9.9,   Method: Compositional matrix adjust.
 Identities = 25/92 (27%), Positives = 38/92 (41%), Gaps = 9/92 (9%)

Query: 411 DNPLEVGISQDTEAADVKTSAQEDI----DSRKEGPNPAENPAQPEPRDEVPRSSDMIDI 466
           DN  E+G+ Q  +A ++   AQE++    DSR    +    P +PE  D  PR      +
Sbjct: 291 DNTREIGLRQFAKAYEIAGQAQEEVLGELDSRFRFVDFTRLPIRPEFTDGQPR-----QL 345

Query: 467 CKTEALPESCSSEYQEHPSDDGYETAEESFLS 498
           C         +   ++ P   G E     FLS
Sbjct: 346 CTAAIGTSLAAGSTEDGPGPLGLEEGNNPFLS 377


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.314    0.130    0.376 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 234,515,774
Number of Sequences: 539616
Number of extensions: 10066988
Number of successful extensions: 24794
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 163
Number of HSP's that attempted gapping in prelim test: 24542
Number of HSP's gapped (non-prelim): 365
length of query: 623
length of database: 191,569,459
effective HSP length: 124
effective length of query: 499
effective length of database: 124,657,075
effective search space: 62203880425
effective search space used: 62203880425
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 64 (29.3 bits)