BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 006985
(622 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 53/127 (41%), Gaps = 6/127 (4%)
Query: 201 FASRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQV 260
FA R Y+EL ++ ++ L DV PD D + L M ++ G L + +
Sbjct: 67 FAKRAYRELRLLKHMRHENVIGLL-----DVFTPDETLDDFTDFYLVMPFM-GTDLGKLM 120
Query: 261 AIESQGLKVLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPE 320
E G + + + LR + G H D PGNL + +L LDFG+ +
Sbjct: 121 KHEKLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLARQADS 180
Query: 321 EARFAII 327
E ++
Sbjct: 181 EMXGXVV 187
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 35.4 bits (80), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 69/190 (36%), Gaps = 44/190 (23%)
Query: 141 LGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDE 200
G VY A+ K S I+A+KV E G++ L R V + + +++ L
Sbjct: 21 FGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSH----LRHPNILRLYGY 76
Query: 201 F--ASRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNE 258
F A+RVY L Y G R +KL K +E
Sbjct: 77 FHDATRVYLILEYAPLGTVYRELQKL-----------------------------SKFDE 107
Query: 259 QVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSET 318
Q + +L N C ++++ H D P NLL G+L DFG
Sbjct: 108 Q----RTATYITELANALSYCHSKRVI-----HRDIKPENLLLGSAGELKIADFGWSVHA 158
Query: 319 PEEARFAIIG 328
P R A+ G
Sbjct: 159 PSSRRAALCG 168
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 69/190 (36%), Gaps = 44/190 (23%)
Query: 141 LGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDE 200
G VY A+ K S I+A+KV E G++ L R V + + +++ L
Sbjct: 24 FGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSH----LRHPNILRLYGY 79
Query: 201 F--ASRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNE 258
F A+RVY L Y G R +KL K +E
Sbjct: 80 FHDATRVYLILEYAPLGTVYRELQKL-----------------------------SKFDE 110
Query: 259 QVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSET 318
Q + +L N C ++++ H D P NLL G+L DFG
Sbjct: 111 Q----RTATYITELANALSYCHSKRVI-----HRDIKPENLLLGSAGELKIADFGWSVHA 161
Query: 319 PEEARFAIIG 328
P R A+ G
Sbjct: 162 PSSRRAALCG 171
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 34.7 bits (78), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 69/190 (36%), Gaps = 44/190 (23%)
Query: 141 LGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDE 200
G VY A+ K S I+A+KV E G++ L R V + + +++ L
Sbjct: 21 FGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSH----LRHPNILRLYGY 76
Query: 201 F--ASRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNE 258
F ++RVY L Y G R +KL K +E
Sbjct: 77 FHDSTRVYLILEYAPLGTVYRELQKL-----------------------------SKFDE 107
Query: 259 QVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSET 318
Q + +L N C ++++ H D P NLL G+L DFG
Sbjct: 108 Q----RTATYITELANALSYCHSKKVI-----HRDIKPENLLLGSAGELKIADFGWSVHA 158
Query: 319 PEEARFAIIG 328
P R A+ G
Sbjct: 159 PSSRRAALCG 168
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 34.7 bits (78), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 69/190 (36%), Gaps = 44/190 (23%)
Query: 141 LGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDE 200
G VY A+ K S I+A+KV E G++ L R V + + +++ L
Sbjct: 26 FGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSH----LRHPNILRLYGY 81
Query: 201 F--ASRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNE 258
F A+RVY L Y G+ + +KL K +E
Sbjct: 82 FHDATRVYLILEYAPRGEVYKELQKL-----------------------------SKFDE 112
Query: 259 QVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSET 318
Q + +L N C ++++ H D P NLL G+L DFG
Sbjct: 113 Q----RTATYITELANALSYCHSKRVI-----HRDIKPENLLLGSAGELKIADFGWSVHA 163
Query: 319 PEEARFAIIG 328
P R + G
Sbjct: 164 PSSRRTTLCG 173
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 34.3 bits (77), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 68/190 (35%), Gaps = 44/190 (23%)
Query: 141 LGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDE 200
G VY A+ K S I+A+KV E G++ L R V + + +++ L
Sbjct: 20 FGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSH----LRHPNILRLYGY 75
Query: 201 F--ASRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNE 258
F A+RVY L Y G R +KL K +E
Sbjct: 76 FHDATRVYLILEYAPLGTVYRELQKL-----------------------------SKFDE 106
Query: 259 QVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSET 318
Q + +L N C ++++ H D P NLL G+L DFG
Sbjct: 107 Q----RTATYITELANALSYCHSKRVI-----HRDIKPENLLLGSAGELKIADFGWSVHA 157
Query: 319 PEEARFAIIG 328
P R + G
Sbjct: 158 PSSRRTTLCG 167
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 33.9 bits (76), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 68/190 (35%), Gaps = 44/190 (23%)
Query: 141 LGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDE 200
G VY A+ K S I+A+KV E G++ L R V + + +++ L
Sbjct: 24 FGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSH----LRHPNILRLYGY 79
Query: 201 F--ASRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNE 258
F A+RVY L Y G R +KL K +E
Sbjct: 80 FHDATRVYLILEYAPLGTVYRELQKL-----------------------------SKFDE 110
Query: 259 QVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSET 318
Q + +L N C ++++ H D P NLL G+L DFG
Sbjct: 111 Q----RTATYITELANALSYCHSKRVI-----HRDIKPENLLLGSAGELKIADFGWSVHA 161
Query: 319 PEEARFAIIG 328
P R + G
Sbjct: 162 PSSRRTTLCG 171
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 33.9 bits (76), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 69/190 (36%), Gaps = 44/190 (23%)
Query: 141 LGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDE 200
G VY A+ K S I+A+KV E G++ L R V + + +++ L
Sbjct: 26 FGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSH----LRHPNILRLYGY 81
Query: 201 F--ASRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNE 258
F A+RVY L Y G+ + +KL K +E
Sbjct: 82 FHDATRVYLILEYAPRGEVYKELQKL-----------------------------SKFDE 112
Query: 259 QVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSET 318
Q + +L N C ++++ H D P NLL G+L DFG
Sbjct: 113 Q----RTATYITELANALSYCHSKRVI-----HRDIKPENLLLGSAGELKIADFGWSVHA 163
Query: 319 PEEARFAIIG 328
P R + G
Sbjct: 164 PSSRRXXLXG 173
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 33.9 bits (76), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 67/150 (44%), Gaps = 16/150 (10%)
Query: 201 FASRVYQELNYVQEGQNARRFKKLYADKEDVLVP---DIFWDY-TSGKV-LTMEWVEGVK 255
FA +V ++ V+ ++ K E+V P D+ + + T GK+ L +E++ G +
Sbjct: 48 FAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGE 107
Query: 256 LNEQVAIESQGLKVLDLVN---TGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDF 312
L Q +E +G+ + D I +L L + G + D P N++ +G + DF
Sbjct: 108 LFMQ--LEREGIFMEDTACFYLAEISMALGHLHQKGIIYRDLKPENIMLNHQGHVKLTDF 165
Query: 313 GMMSETPEEARFAIIGHVVHMVNRDYEAMA 342
G+ E+ + G V H E MA
Sbjct: 166 GLCKESIHD------GTVTHTFCGTIEYMA 189
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 33.9 bits (76), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 68/190 (35%), Gaps = 44/190 (23%)
Query: 141 LGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDE 200
G VY A+ K S I+A+KV E G++ L R V + + +++ L
Sbjct: 21 FGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSH----LRHPNILRLYGY 76
Query: 201 F--ASRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNE 258
F A+RVY L Y G R +KL K +E
Sbjct: 77 FHDATRVYLILEYAPLGTVYRELQKL-----------------------------SKFDE 107
Query: 259 QVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSET 318
Q + +L N C ++++ H D P NLL G+L DFG
Sbjct: 108 Q----RTATYITELANALSYCHSKRVI-----HRDIKPENLLLGSAGELKIADFGWSVHA 158
Query: 319 PEEARFAIIG 328
P R + G
Sbjct: 159 PSSRRXXLCG 168
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 33.9 bits (76), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 68/190 (35%), Gaps = 44/190 (23%)
Query: 141 LGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDE 200
G VY A+ K S I+A+KV E G++ L R V + + +++ L
Sbjct: 25 FGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSH----LRHPNILRLYGY 80
Query: 201 F--ASRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNE 258
F A+RVY L Y G R +KL K +E
Sbjct: 81 FHDATRVYLILEYAPLGTVYRELQKL-----------------------------SKFDE 111
Query: 259 QVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSET 318
Q + +L N C ++++ H D P NLL G+L DFG
Sbjct: 112 Q----RTATYITELANALSYCHSKRVI-----HRDIKPENLLLGSAGELKIADFGWSVHA 162
Query: 319 PEEARFAIIG 328
P R + G
Sbjct: 163 PSSRRTTLCG 172
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 33.9 bits (76), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 67/150 (44%), Gaps = 16/150 (10%)
Query: 201 FASRVYQELNYVQEGQNARRFKKLYADKEDVLVP---DIFWDY-TSGKV-LTMEWVEGVK 255
FA +V ++ V+ ++ K E+V P D+ + + T GK+ L +E++ G +
Sbjct: 48 FAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGE 107
Query: 256 LNEQVAIESQGLKVLDLVN---TGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDF 312
L Q +E +G+ + D I +L L + G + D P N++ +G + DF
Sbjct: 108 LFMQ--LEREGIFMEDTACFYLAEISMALGHLHQKGIIYRDLKPENIMLNHQGHVKLTDF 165
Query: 313 GMMSETPEEARFAIIGHVVHMVNRDYEAMA 342
G+ E+ + G V H E MA
Sbjct: 166 GLCKESIHD------GTVTHXFCGTIEYMA 189
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 33.9 bits (76), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 68/190 (35%), Gaps = 44/190 (23%)
Query: 141 LGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDE 200
G VY A+ K S I+A+KV E G++ L R V + + +++ L
Sbjct: 24 FGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSH----LRHPNILRLYGY 79
Query: 201 F--ASRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNE 258
F A+RVY L Y G R +KL K +E
Sbjct: 80 FHDATRVYLILEYAPLGTVYRELQKL-----------------------------SKFDE 110
Query: 259 QVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSET 318
Q + +L N C ++++ H D P NLL G+L DFG
Sbjct: 111 Q----RTATYITELANALSYCHSKRVI-----HRDIKPENLLLGSAGELKIADFGWSVHA 161
Query: 319 PEEARFAIIG 328
P R + G
Sbjct: 162 PSSRRXXLCG 171
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 33.9 bits (76), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 37/81 (45%), Gaps = 6/81 (7%)
Query: 277 IQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSET--PEEARFAIIGHVVHM- 333
+ +L L G + D P N+L EG + DFG+ E+ E+ ++ G V +M
Sbjct: 135 LALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMA 194
Query: 334 ---VNRDYEAMARDYYALDFL 351
VNR + D+++ L
Sbjct: 195 PEVVNRRGHTQSADWWSFGVL 215
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 33.9 bits (76), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 37/81 (45%), Gaps = 6/81 (7%)
Query: 277 IQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSET--PEEARFAIIGHVVHM- 333
+ +L L G + D P N+L EG + DFG+ E+ E+ ++ G V +M
Sbjct: 136 LALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMA 195
Query: 334 ---VNRDYEAMARDYYALDFL 351
VNR + D+++ L
Sbjct: 196 PEVVNRRGHTQSADWWSFGVL 216
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 33.9 bits (76), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 68/190 (35%), Gaps = 44/190 (23%)
Query: 141 LGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDE 200
G VY A+ K S I+A+KV E G++ L R V + + +++ L
Sbjct: 24 FGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSH----LRHPNILRLYGY 79
Query: 201 F--ASRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNE 258
F A+RVY L Y G R +KL K +E
Sbjct: 80 FHDATRVYLILEYAPLGTVYRELQKL-----------------------------SKFDE 110
Query: 259 QVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSET 318
Q + +L N C ++++ H D P NLL G+L DFG
Sbjct: 111 Q----RTATYITELANALSYCHSKRVI-----HRDIKPENLLLGSAGELKIADFGWSVHA 161
Query: 319 PEEARFAIIG 328
P R + G
Sbjct: 162 PSSRRTTLCG 171
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 33.5 bits (75), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 68/190 (35%), Gaps = 44/190 (23%)
Query: 141 LGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDE 200
G VY A+ K S I+A+KV E G++ L R V + + +++ L
Sbjct: 21 FGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSH----LRHPNILRLYGY 76
Query: 201 F--ASRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNE 258
F A+RVY L Y G R +KL K +E
Sbjct: 77 FHDATRVYLILEYAPLGTVYRELQKL-----------------------------SKFDE 107
Query: 259 QVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSET 318
Q + +L N C ++++ H D P NLL G+L DFG
Sbjct: 108 Q----RTATYITELANALSYCHSKRVI-----HRDIKPENLLLGSAGELKIADFGWSVHA 158
Query: 319 PEEARFAIIG 328
P R + G
Sbjct: 159 PSSRRTTLCG 168
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 33.5 bits (75), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 68/190 (35%), Gaps = 44/190 (23%)
Query: 141 LGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDE 200
G VY A+ K S I+A+KV E G++ L R V + + +++ L
Sbjct: 23 FGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSH----LRHPNILRLYGY 78
Query: 201 F--ASRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNE 258
F A+RVY L Y G R +KL K +E
Sbjct: 79 FHDATRVYLILEYAPLGTVYRELQKL-----------------------------SKFDE 109
Query: 259 QVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSET 318
Q + +L N C ++++ H D P NLL G+L DFG
Sbjct: 110 Q----RTATYITELANALSYCHSKRVI-----HRDIKPENLLLGSAGELKIADFGWSVHA 160
Query: 319 PEEARFAIIG 328
P R + G
Sbjct: 161 PSSRRXXLCG 170
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 33.5 bits (75), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 37/81 (45%), Gaps = 6/81 (7%)
Query: 277 IQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSET--PEEARFAIIGHVVHM- 333
+ +L L G + D P N+L EG + DFG+ E+ E+ ++ G V +M
Sbjct: 135 LALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMA 194
Query: 334 ---VNRDYEAMARDYYALDFL 351
VNR + D+++ L
Sbjct: 195 PEVVNRRGHTQSADWWSFGVL 215
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 33.5 bits (75), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 25/106 (23%), Positives = 47/106 (44%), Gaps = 12/106 (11%)
Query: 220 RFKKLYADKEDVLVPDIFWDYTSGKVLT---------MEWVEGVKLNEQVAIES--QGLK 268
RF++ + + P I Y +G+ T ME+V+GV L + V E +
Sbjct: 58 RFRREAQNAAALNHPAIVAVYATGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKR 117
Query: 269 VLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGM 314
++++ Q +L + G H D P N++ + + +DFG+
Sbjct: 118 AIEVIADACQ-ALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGI 162
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 33.5 bits (75), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 68/190 (35%), Gaps = 44/190 (23%)
Query: 141 LGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDE 200
G VY A+ K S I+A+KV E G++ L R V + + +++ L
Sbjct: 21 FGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSH----LRHPNILRLYGY 76
Query: 201 F--ASRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNE 258
F A+RVY L Y G R +KL K +E
Sbjct: 77 FHDATRVYLILEYAPLGTVYRELQKL-----------------------------SKFDE 107
Query: 259 QVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSET 318
Q + +L N C ++++ H D P NLL G+L DFG
Sbjct: 108 Q----RTATYITELANALSYCHSKRVI-----HRDIKPENLLLGSAGELKIADFGWSVHA 158
Query: 319 PEEARFAIIG 328
P R + G
Sbjct: 159 PSSRRTXLCG 168
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 33.5 bits (75), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 68/190 (35%), Gaps = 44/190 (23%)
Query: 141 LGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDE 200
G VY A+ K S I+A+KV E G++ L R V + + +++ L
Sbjct: 22 FGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSH----LRHPNILRLYGY 77
Query: 201 F--ASRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNE 258
F A+RVY L Y G R +KL K +E
Sbjct: 78 FHDATRVYLILEYAPLGTVYRELQKL-----------------------------SKFDE 108
Query: 259 QVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSET 318
Q + +L N C ++++ H D P NLL G+L DFG
Sbjct: 109 QRT----ATYITELANALSYCHSKRVI-----HRDIKPENLLLGSAGELKIADFGWSCHA 159
Query: 319 PEEARFAIIG 328
P R + G
Sbjct: 160 PSSRRTTLSG 169
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 33.5 bits (75), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 73/206 (35%), Gaps = 44/206 (21%)
Query: 141 LGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDE 200
G VY A+ K S I+A+KV E G++ L R V + + +++ L
Sbjct: 26 FGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSH----LRHPNILRLYGY 81
Query: 201 F--ASRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNE 258
F A+RVY L Y G R +KL K +E
Sbjct: 82 FHDATRVYLILEYAPLGTVYRELQKL-----------------------------SKFDE 112
Query: 259 QVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSET 318
Q + +L N C ++++ H D P NLL G+L DFG
Sbjct: 113 QRT----ATYITELANALSYCHSKRVI-----HRDIKPENLLLGSAGELKIADFGWSVHA 163
Query: 319 PEEARFAIIGHVVHMVNRDYEAMARD 344
P R + G + ++ E D
Sbjct: 164 PSSRRTTLCGTLDYLPPEXIEGRXHD 189
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 33.5 bits (75), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 68/190 (35%), Gaps = 44/190 (23%)
Query: 141 LGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDE 200
G VY A+ K S I+A+KV E G++ L R V + + +++ L
Sbjct: 26 FGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSH----LRHPNILRLYGY 81
Query: 201 F--ASRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNE 258
F A+RVY L Y G R +KL K +E
Sbjct: 82 FHDATRVYLILEYAPLGTVYRELQKL-----------------------------SKFDE 112
Query: 259 QVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSET 318
Q + +L N C ++++ H D P NLL G+L DFG
Sbjct: 113 Q----RTATYITELANALSYCHSKRVI-----HRDIKPENLLLGSAGELKIADFGWSVHA 163
Query: 319 PEEARFAIIG 328
P R + G
Sbjct: 164 PSSRRTTLCG 173
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 33.5 bits (75), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 41/91 (45%), Gaps = 2/91 (2%)
Query: 233 VPDIFWDYTSGKVL--TMEWVEGVKLNEQVAIESQGLKVLDLVNTGIQCSLRQLLEYGYF 290
V D++ Y G L ME++EG L + V + + V + +L L G
Sbjct: 104 VVDMYSSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIATVCLSVLRALSYLHNQGVI 163
Query: 291 HADPHPGNLLATPEGKLAFLDFGMMSETPEE 321
H D ++L T +G++ DFG ++ +E
Sbjct: 164 HRDIKSDSILLTSDGRIKLSDFGFCAQVSKE 194
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 33.5 bits (75), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 68/190 (35%), Gaps = 44/190 (23%)
Query: 141 LGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDE 200
G VY A+ K S I+A+KV E G++ L R V + + +++ L
Sbjct: 38 FGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSH----LRHPNILRLYGY 93
Query: 201 F--ASRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNE 258
F A+RVY L Y G R +KL K +E
Sbjct: 94 FHDATRVYLILEYAPLGTVYRELQKL-----------------------------SKFDE 124
Query: 259 QVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSET 318
Q + +L N C ++++ H D P NLL G+L DFG
Sbjct: 125 QRT----ATYITELANALSYCHSKRVI-----HRDIKPENLLLGSAGELKIADFGWSVHA 175
Query: 319 PEEARFAIIG 328
P R + G
Sbjct: 176 PSSRRTTLCG 185
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 33.1 bits (74), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 68/190 (35%), Gaps = 44/190 (23%)
Query: 141 LGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDE 200
G VY A+ K S I+A+KV E G++ L R V + + +++ L
Sbjct: 21 FGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSH----LRHPNILRLYGY 76
Query: 201 F--ASRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNE 258
F A+RVY L Y G R +KL K +E
Sbjct: 77 FHDATRVYLILEYAPLGTVYRELQKL-----------------------------SKFDE 107
Query: 259 QVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSET 318
Q + +L N C ++++ H D P NLL G+L DFG
Sbjct: 108 Q----RTATYITELANALSYCHSKRVI-----HRDIKPENLLLGSAGELKIADFGWSVHA 158
Query: 319 PEEARFAIIG 328
P R + G
Sbjct: 159 PSSRRTELCG 168
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 33.1 bits (74), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 68/190 (35%), Gaps = 44/190 (23%)
Query: 141 LGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDE 200
G VY A+ K S I+A+KV E G++ L R V + + +++ L
Sbjct: 47 FGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSH----LRHPNILRLYGY 102
Query: 201 F--ASRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNE 258
F A+RVY L Y G R +KL K +E
Sbjct: 103 FHDATRVYLILEYAPLGTVYRELQKL-----------------------------SKFDE 133
Query: 259 QVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSET 318
Q + +L N C ++++ H D P NLL G+L DFG
Sbjct: 134 QRT----ATYITELANALSYCHSKRVI-----HRDIKPENLLLGSAGELKIADFGWSVHA 184
Query: 319 PEEARFAIIG 328
P R + G
Sbjct: 185 PSSRRTTLCG 194
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 33.1 bits (74), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 68/190 (35%), Gaps = 44/190 (23%)
Query: 141 LGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDE 200
G VY A+ K S I+A+KV E G++ L R V + + +++ L
Sbjct: 22 FGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSH----LRHPNILRLYGY 77
Query: 201 F--ASRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNE 258
F A+RVY L Y G R +KL K +E
Sbjct: 78 FHDATRVYLILEYAPLGTVYRELQKL-----------------------------SKFDE 108
Query: 259 QVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSET 318
Q + +L N C ++++ H D P NLL G+L DFG
Sbjct: 109 Q----RTATYITELANALSYCHSKRVI-----HRDIKPENLLLGSAGELKIADFGWSVHA 159
Query: 319 PEEARFAIIG 328
P R + G
Sbjct: 160 PSSRRDTLCG 169
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 33.1 bits (74), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 68/190 (35%), Gaps = 44/190 (23%)
Query: 141 LGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDE 200
G VY A+ K S I+A+KV E G++ L R V + + +++ L
Sbjct: 21 FGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSH----LRHPNILRLYGY 76
Query: 201 F--ASRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNE 258
F A+RVY L Y G R +KL K +E
Sbjct: 77 FHDATRVYLILEYAPLGTVYRELQKL-----------------------------SKFDE 107
Query: 259 QVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSET 318
Q + +L N C ++++ H D P NLL G+L DFG
Sbjct: 108 Q----RTATYITELANALSYCHSKRVI-----HRDIKPENLLLGSAGELKIADFGWSVHA 158
Query: 319 PEEARFAIIG 328
P R + G
Sbjct: 159 PSSRRTDLCG 168
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 33.1 bits (74), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 68/190 (35%), Gaps = 44/190 (23%)
Query: 141 LGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDE 200
G VY A+ K S I+A+KV E G++ L R V + + +++ L
Sbjct: 21 FGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSH----LRHPNILRLYGY 76
Query: 201 F--ASRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNE 258
F A+RVY L Y G R +KL K +E
Sbjct: 77 FHDATRVYLILEYAPLGTVYRELQKL-----------------------------SKFDE 107
Query: 259 QVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSET 318
Q + +L N C ++++ H D P NLL G+L DFG
Sbjct: 108 Q----RTATYITELANALSYCHSKRVI-----HRDIKPENLLLGSAGELKIADFGWSVHA 158
Query: 319 PEEARFAIIG 328
P R + G
Sbjct: 159 PSSRRTDLCG 168
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 33.1 bits (74), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 47/106 (44%), Gaps = 12/106 (11%)
Query: 220 RFKKLYADKEDVLVPDIFWDYTSGKVLT---------MEWVEGVKLNEQVAIES--QGLK 268
RF++ + + P I Y +G+ T ME+V+GV L + V E +
Sbjct: 58 RFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKR 117
Query: 269 VLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGM 314
++++ Q +L + G H D P N+L + + +DFG+
Sbjct: 118 AIEVIADACQ-ALNFSHQNGIIHRDVKPANILISATNAVKVVDFGI 162
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 33.1 bits (74), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 36/81 (44%), Gaps = 6/81 (7%)
Query: 277 IQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSET--PEEARFAIIGHVVHM- 333
+ L L G + D P N+L EG + DFG+ E E+ ++ G V +M
Sbjct: 139 LALGLDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAYSFCGTVEYMA 198
Query: 334 ---VNRDYEAMARDYYALDFL 351
VNR + + D+++ L
Sbjct: 199 PEVVNRQGHSHSADWWSYGVL 219
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 33.1 bits (74), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 25/106 (23%), Positives = 47/106 (44%), Gaps = 12/106 (11%)
Query: 220 RFKKLYADKEDVLVPDIFWDYTSGKVLT---------MEWVEGVKLNEQVAIES--QGLK 268
RF++ + + P I Y +G+ T ME+V+GV L + V E +
Sbjct: 58 RFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKR 117
Query: 269 VLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGM 314
++++ Q +L + G H D P N++ + + +DFG+
Sbjct: 118 AIEVIADACQ-ALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGI 162
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 33.1 bits (74), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 68/190 (35%), Gaps = 44/190 (23%)
Query: 141 LGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDE 200
G VY A+ K S I+A+KV E G++ L R V + + +++ L
Sbjct: 22 FGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSH----LRHPNILRLYGY 77
Query: 201 F--ASRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNE 258
F A+RVY L Y G R +KL K +E
Sbjct: 78 FHDATRVYLILEYAPLGTVYRELQKL-----------------------------SKFDE 108
Query: 259 QVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSET 318
Q + +L N C ++++ H D P NLL G+L DFG
Sbjct: 109 Q----RTATYITELANALSYCHSKRVI-----HRDIKPENLLLGSAGELKIADFGWSVHA 159
Query: 319 PEEARFAIIG 328
P R + G
Sbjct: 160 PSSRRTDLCG 169
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 33.1 bits (74), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 25/106 (23%), Positives = 47/106 (44%), Gaps = 12/106 (11%)
Query: 220 RFKKLYADKEDVLVPDIFWDYTSGKVLT---------MEWVEGVKLNEQVAIES--QGLK 268
RF++ + + P I Y +G+ T ME+V+GV L + V E +
Sbjct: 58 RFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKR 117
Query: 269 VLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGM 314
++++ Q +L + G H D P N++ + + +DFG+
Sbjct: 118 AIEVIADACQ-ALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGI 162
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 33.1 bits (74), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 25/106 (23%), Positives = 47/106 (44%), Gaps = 12/106 (11%)
Query: 220 RFKKLYADKEDVLVPDIFWDYTSGKVLT---------MEWVEGVKLNEQVAIES--QGLK 268
RF++ + + P I Y +G+ T ME+V+GV L + V E +
Sbjct: 58 RFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKR 117
Query: 269 VLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGM 314
++++ Q +L + G H D P N++ + + +DFG+
Sbjct: 118 AIEVIADACQ-ALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGI 162
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 32.7 bits (73), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 41/91 (45%), Gaps = 8/91 (8%)
Query: 246 LTMEWVEGVKLNEQVAIESQG-LKVLDLVNTGIQC--SLRQLLEYGYFHADPHPGNLLAT 302
L ME++EG L+E IES G L V +N Q ++ + H D P N+L
Sbjct: 88 LVMEYIEGPTLSE--YIESHGPLSVDTAINFTNQILDGIKHAHDMRIVHRDIKPQNILID 145
Query: 303 PEGKLAFLDFGM---MSETPEEARFAIIGHV 330
L DFG+ +SET ++G V
Sbjct: 146 SNKTLKIFDFGIAKALSETSLTQTNHVLGTV 176
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 32.7 bits (73), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 68/190 (35%), Gaps = 44/190 (23%)
Query: 141 LGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDE 200
G VY A+ K S I+A+KV E G++ L R V + + +++ L
Sbjct: 26 FGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSH----LRHPNILRLYGY 81
Query: 201 F--ASRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNE 258
F A+RVY L Y G R +KL K +E
Sbjct: 82 FHDATRVYLILEYAPLGTVYRELQKL-----------------------------SKFDE 112
Query: 259 QVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSET 318
Q + +L N C ++++ H D P NLL G+L DFG
Sbjct: 113 Q----RTATYITELANALSYCHSKRVI-----HRDIKPENLLLGSAGELKIADFGWSVHA 163
Query: 319 PEEARFAIIG 328
P R + G
Sbjct: 164 PSSRRTDLCG 173
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 32.7 bits (73), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 18/36 (50%)
Query: 279 CSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGM 314
C ++ L G H D P N++ + L LDFG+
Sbjct: 137 CGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGL 172
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 32.7 bits (73), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 25/106 (23%), Positives = 47/106 (44%), Gaps = 12/106 (11%)
Query: 220 RFKKLYADKEDVLVPDIFWDYTSGKVLT---------MEWVEGVKLNEQVAIES--QGLK 268
RF++ + + P I Y +G+ T ME+V+GV L + V E +
Sbjct: 75 RFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKR 134
Query: 269 VLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGM 314
++++ Q +L + G H D P N++ + + +DFG+
Sbjct: 135 AIEVIADACQ-ALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGI 179
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 32.7 bits (73), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 18/36 (50%)
Query: 279 CSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGM 314
C ++ L G H D P N++ + L LDFG+
Sbjct: 137 CGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGL 172
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 32.3 bits (72), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 62/144 (43%), Gaps = 22/144 (15%)
Query: 201 FASRVYQELNYVQEGQNARRFKKLYADKEDVLVPDI----FWDYTSGKVLTMEWVEGVKL 256
FA R Y+EL ++ Q+ L DV P F+D+ L M +++ L
Sbjct: 84 FAKRAYRELLLLKHMQHENVIGLL-----DVFTPASSLRNFYDF----YLVMPFMQ-TDL 133
Query: 257 NEQVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMS 316
+ + +E K+ LV ++ L+ + G H D PGNL + +L LDFG+
Sbjct: 134 QKIMGMEFSEEKIQYLVYQMLK-GLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGL-- 190
Query: 317 ETPEEARFAIIGHVVHMVNRDYEA 340
AR A ++V R Y A
Sbjct: 191 -----ARHADAEMTGYVVTRWYRA 209
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 32.3 bits (72), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 68/190 (35%), Gaps = 44/190 (23%)
Query: 141 LGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDE 200
G VY A+ K S I+A+KV E G++ L R V + + +++ L
Sbjct: 24 FGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSH----LRHPNILRLYGY 79
Query: 201 F--ASRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNE 258
F A+RVY L Y G R +KL K +E
Sbjct: 80 FHDATRVYLILEYAPLGTVYRELQKL-----------------------------SKFDE 110
Query: 259 QVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSET 318
Q + +L N C ++++ H D P NLL G+L DFG
Sbjct: 111 Q----RTATYITELANALSYCHSKRVI-----HRDIKPENLLLGSAGELKIADFGWSVHA 161
Query: 319 PEEARFAIIG 328
P R + G
Sbjct: 162 PSSRRDDLCG 171
>pdb|3E2Z|B Chain B, Crystal Structure Of Mouse Kynurenine Aminotransferase
Iii In Complex With Kynurenine
pdb|3E2Y|A Chain A, Crystal Structure Of Mouse Kynurenine Aminotransferase
Iii In Complex With Glutamine
pdb|3E2Y|B Chain B, Crystal Structure Of Mouse Kynurenine Aminotransferase
Iii In Complex With Glutamine
Length = 410
Score = 32.3 bits (72), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 19/35 (54%), Positives = 23/35 (65%), Gaps = 6/35 (17%)
Query: 68 FTRLG--PTFVKLGQGLSTRPDICPPEYL-EELSE 99
FT+L P+ V LGQG PDI PP Y+ EELS+
Sbjct: 16 FTKLAADPSVVNLGQGF---PDISPPSYVKEELSK 47
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 32.3 bits (72), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 18/36 (50%)
Query: 279 CSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGM 314
C ++ L G H D P N++ + L LDFG+
Sbjct: 137 CGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGL 172
>pdb|3E2F|A Chain A, Crystal Structure Of Mouse Kynurenine Aminotransferase
Iii, Plp-Bound Form
pdb|3E2F|B Chain B, Crystal Structure Of Mouse Kynurenine Aminotransferase
Iii, Plp-Bound Form
pdb|3E2Z|A Chain A, Crystal Structure Of Mouse Kynurenine Aminotransferase
Iii In Complex With Kynurenine
pdb|2ZJG|A Chain A, Crystal Structural Of Mouse Kynurenine Aminotransferase
Iii
pdb|2ZJG|B Chain B, Crystal Structural Of Mouse Kynurenine Aminotransferase
Iii
Length = 410
Score = 32.3 bits (72), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 19/35 (54%), Positives = 23/35 (65%), Gaps = 6/35 (17%)
Query: 68 FTRLG--PTFVKLGQGLSTRPDICPPEYL-EELSE 99
FT+L P+ V LGQG PDI PP Y+ EELS+
Sbjct: 16 FTKLAADPSVVNLGQGF---PDISPPSYVKEELSK 47
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 32.3 bits (72), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 20/46 (43%)
Query: 277 IQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEA 322
I L L E G H D HPGN+L + DF + E +A
Sbjct: 143 ILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAREDTADA 188
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 32.3 bits (72), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 67/190 (35%), Gaps = 44/190 (23%)
Query: 141 LGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDE 200
G VY A+ K I+A+KV E G++ L R V + + +++ L
Sbjct: 18 FGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSH----LRHPNILRLYGY 73
Query: 201 F--ASRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNE 258
F A+RVY L Y G R +KL K +E
Sbjct: 74 FHDATRVYLILEYAPLGTVYRELQKL-----------------------------SKFDE 104
Query: 259 QVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSET 318
Q + +L N C ++++ H D P NLL G+L DFG
Sbjct: 105 Q----RTATYITELANALSYCHSKRVI-----HRDIKPENLLLGSAGELKIADFGWSVHA 155
Query: 319 PEEARFAIIG 328
P R + G
Sbjct: 156 PSSRRTTLCG 165
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 32.0 bits (71), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 20/46 (43%)
Query: 277 IQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEA 322
I L L E G H D HPGN+L + DF + E +A
Sbjct: 143 ILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAREDTADA 188
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 32.0 bits (71), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 18/36 (50%)
Query: 279 CSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGM 314
C ++ L G H D P N++ + L LDFG+
Sbjct: 137 CGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGL 172
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 32.0 bits (71), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 18/36 (50%)
Query: 279 CSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGM 314
C ++ L G H D P N++ + L LDFG+
Sbjct: 135 CGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGL 170
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 32.0 bits (71), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 18/36 (50%)
Query: 279 CSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGM 314
C ++ L G H D P N++ + L LDFG+
Sbjct: 137 CGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGL 172
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 32.0 bits (71), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 18/36 (50%)
Query: 279 CSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGM 314
C ++ L G H D P N++ + L LDFG+
Sbjct: 137 CGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGL 172
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 32.0 bits (71), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 18/36 (50%)
Query: 279 CSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGM 314
C ++ L G H D P N++ + L LDFG+
Sbjct: 139 CGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGL 174
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 32.0 bits (71), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 18/36 (50%)
Query: 279 CSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGM 314
C ++ L G H D P N++ + L LDFG+
Sbjct: 137 CGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGL 172
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 32.0 bits (71), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 18/36 (50%)
Query: 279 CSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGM 314
C ++ L G H D P N++ + L LDFG+
Sbjct: 137 CGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGL 172
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 32.0 bits (71), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 18/36 (50%)
Query: 279 CSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGM 314
C ++ L G H D P N++ + L LDFG+
Sbjct: 137 CGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGL 172
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 32.0 bits (71), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 18/36 (50%)
Query: 279 CSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGM 314
C ++ L G H D P N++ + L LDFG+
Sbjct: 137 CGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGL 172
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 32.0 bits (71), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 18/36 (50%)
Query: 279 CSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGM 314
C ++ L G H D P N++ + L LDFG+
Sbjct: 138 CGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGL 173
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 32.0 bits (71), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 18/36 (50%)
Query: 279 CSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGM 314
C ++ L G H D P N++ + L LDFG+
Sbjct: 136 CGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGL 171
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 32.0 bits (71), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 18/36 (50%)
Query: 279 CSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGM 314
C ++ L G H D P N++ + L LDFG+
Sbjct: 137 CGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGL 172
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 32.0 bits (71), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 18/36 (50%)
Query: 279 CSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGM 314
C ++ L G H D P N++ + L LDFG+
Sbjct: 137 CGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGL 172
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 32.0 bits (71), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 18/36 (50%)
Query: 279 CSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGM 314
C ++ L G H D P N++ + L LDFG+
Sbjct: 138 CGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGL 173
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 32.0 bits (71), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 18/36 (50%)
Query: 279 CSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGM 314
C ++ L G H D P N++ + L LDFG+
Sbjct: 138 CGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGL 173
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 18/36 (50%)
Query: 279 CSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGM 314
C ++ L G H D P N++ + L LDFG+
Sbjct: 137 CGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGL 172
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 18/36 (50%)
Query: 279 CSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGM 314
C ++ L G H D P N++ + L LDFG+
Sbjct: 131 CGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGL 166
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 18/36 (50%)
Query: 279 CSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGM 314
C ++ L G H D P N++ + L LDFG+
Sbjct: 130 CGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGL 165
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 18/36 (50%)
Query: 279 CSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGM 314
C ++ L G H D P N++ + L LDFG+
Sbjct: 131 CGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGL 166
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 18/36 (50%)
Query: 279 CSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGM 314
C ++ L G H D P N++ + L LDFG+
Sbjct: 175 CGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGL 210
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 18/36 (50%)
Query: 279 CSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGM 314
C ++ L G H D P N++ + L LDFG+
Sbjct: 131 CGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGL 166
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 18/36 (50%)
Query: 279 CSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGM 314
C ++ L G H D P N++ + L LDFG+
Sbjct: 142 CGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGL 177
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 18/36 (50%)
Query: 279 CSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGM 314
C ++ L G H D P N++ + L LDFG+
Sbjct: 175 CGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGL 210
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 31.6 bits (70), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 37/74 (50%), Gaps = 4/74 (5%)
Query: 245 VLTMEWVEGVKLNEQVAIESQGLKVLD--LVNTGIQCSLRQLLEYGYFHADPHPGNLLAT 302
VL ME+V+G +L +++ ES L LD L I +R + + H D P N+L
Sbjct: 162 VLVMEYVDGGELFDRIIDESYNLTELDTILFMKQICEGIRHMHQMYILHLDLKPENILCV 221
Query: 303 PEG--KLAFLDFGM 314
++ +DFG+
Sbjct: 222 NRDAKQIKIIDFGL 235
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 70/175 (40%), Gaps = 36/175 (20%)
Query: 142 GQVYKAQLKYSGQIVAVK-VQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDE 200
G VYKA+ +SG VA+K V+ P EE GL +R V L+ + +VV L+D
Sbjct: 18 GTVYKARDPHSGHFVALKSVRVPNGEE--GLPISTVREVA-LLRRLEAFEHPNVVRLMDV 74
Query: 201 FA-SRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQ 259
A SR +E+ ++ + + Y DK G+
Sbjct: 75 CATSRTDREIKVTLVFEHVDQDLRTYLDKAP--------------------PPGLPAETI 114
Query: 260 VAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGM 314
+ Q L+ LD ++ C + H D P N+L T G + DFG+
Sbjct: 115 KDLMRQFLRGLDFLHA--NCIV---------HRDLKPENILVTSGGTVKLADFGL 158
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 70/175 (40%), Gaps = 36/175 (20%)
Query: 142 GQVYKAQLKYSGQIVAVK-VQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDE 200
G VYKA+ +SG VA+K V+ P EE GL +R V L+ + +VV L+D
Sbjct: 18 GTVYKARDPHSGHFVALKSVRVPNGEE--GLPISTVREVA-LLRRLEAFEHPNVVRLMDV 74
Query: 201 FA-SRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQ 259
A SR +E+ ++ + + Y DK G+
Sbjct: 75 CATSRTDREIKVTLVFEHVDQDLRTYLDKAP--------------------PPGLPAETI 114
Query: 260 VAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGM 314
+ Q L+ LD ++ C + H D P N+L T G + DFG+
Sbjct: 115 KDLMRQFLRGLDFLHA--NCIV---------HRDLKPENILVTSGGTVKLADFGL 158
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 68/190 (35%), Gaps = 44/190 (23%)
Query: 141 LGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDE 200
G VY A+ K S I+A+KV E G++ L R V + + +++ L
Sbjct: 47 FGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSH----LRHPNILRLYGY 102
Query: 201 F--ASRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNE 258
F A+RVY L Y G R +KL K +E
Sbjct: 103 FHDATRVYLILEYAPLGTVYRELQKL-----------------------------SKFDE 133
Query: 259 QVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSET 318
Q + +L N C ++++ H D P NLL G+L DFG
Sbjct: 134 QRT----ATYITELANALSYCHSKRVI-----HRDIKPENLLLGSAGELKIADFGWSVHA 184
Query: 319 PEEARFAIIG 328
P R + G
Sbjct: 185 PSSRRDDLCG 194
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 39/90 (43%), Gaps = 7/90 (7%)
Query: 232 LVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFH 291
LV D W + ME++EG L + V + + V + +L L G H
Sbjct: 87 LVGDELW-------VVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIH 139
Query: 292 ADPHPGNLLATPEGKLAFLDFGMMSETPEE 321
D ++L T +G++ DFG ++ +E
Sbjct: 140 RDIKSDSILLTHDGRVKLSDFGFCAQVSKE 169
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 68/190 (35%), Gaps = 44/190 (23%)
Query: 141 LGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDE 200
G VY A+ + S I+A+KV E G++ L R V + + +++ L
Sbjct: 25 FGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSH----LRHPNILRLYGY 80
Query: 201 F--ASRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNE 258
F A+RVY L Y G R +KL + +E
Sbjct: 81 FHDATRVYLILEYAPLGTVYRELQKL-----------------------------SRFDE 111
Query: 259 QVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSET 318
Q + +L N C ++++ H D P NLL G+L DFG
Sbjct: 112 Q----RTATYITELANALSYCHSKRVI-----HRDIKPENLLLGSNGELKIADFGWSVHA 162
Query: 319 PEEARFAIIG 328
P R + G
Sbjct: 163 PSSRRTTLCG 172
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 70/175 (40%), Gaps = 36/175 (20%)
Query: 142 GQVYKAQLKYSGQIVAVK-VQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDE 200
G VYKA+ +SG VA+K V+ P EE GL +R V L+ + +VV L+D
Sbjct: 18 GTVYKARDPHSGHFVALKSVRVPNGEE--GLPISTVREVA-LLRRLEAFEHPNVVRLMDV 74
Query: 201 FA-SRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQ 259
A SR +E+ ++ + + Y DK G+
Sbjct: 75 CATSRTDREIKVTLVFEHVDQDLRTYLDKAP--------------------PPGLPAETI 114
Query: 260 VAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGM 314
+ Q L+ LD ++ C + H D P N+L T G + DFG+
Sbjct: 115 KDLMRQFLRGLDFLHA--NCIV---------HRDLKPENILVTSGGTVKLADFGL 158
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 31.2 bits (69), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 45/126 (35%), Gaps = 18/126 (14%)
Query: 286 EYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDY 345
++G H D P N+L G++ DFG I G +V +D A Y
Sbjct: 143 KHGVIHRDVKPSNILLDERGQIKLCDFG------------ISGRLVDDKAKDRSAGCAAY 190
Query: 346 YA------LDFLSPDVDVTPIVPALRNFFDDALNSSVSELNFKTIVDGLGAVLYQYPFNV 399
A D PD D+ V +L + N KT + L VL + P +
Sbjct: 191 MAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTKVLQEEPPLL 250
Query: 400 PAYYAL 405
P +
Sbjct: 251 PGHMGF 256
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 31.2 bits (69), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 39/90 (43%), Gaps = 7/90 (7%)
Query: 232 LVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFH 291
LV D W + ME++EG L + V + + V + +L L G H
Sbjct: 96 LVGDELW-------VVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIH 148
Query: 292 ADPHPGNLLATPEGKLAFLDFGMMSETPEE 321
D ++L T +G++ DFG ++ +E
Sbjct: 149 RDIKSDSILLTHDGRVKLSDFGFCAQVSKE 178
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 31.2 bits (69), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 39/90 (43%), Gaps = 7/90 (7%)
Query: 232 LVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFH 291
LV D W + ME++EG L + V + + V + +L L G H
Sbjct: 91 LVGDELW-------VVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIH 143
Query: 292 ADPHPGNLLATPEGKLAFLDFGMMSETPEE 321
D ++L T +G++ DFG ++ +E
Sbjct: 144 RDIKSDSILLTHDGRVKLSDFGFCAQVSKE 173
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 31.2 bits (69), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 39/90 (43%), Gaps = 7/90 (7%)
Query: 232 LVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFH 291
LV D W + ME++EG L + V + + V + +L L G H
Sbjct: 98 LVGDELW-------VVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIH 150
Query: 292 ADPHPGNLLATPEGKLAFLDFGMMSETPEE 321
D ++L T +G++ DFG ++ +E
Sbjct: 151 RDIKSDSILLTHDGRVKLSDFGFCAQVSKE 180
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 31.2 bits (69), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 28/123 (22%), Positives = 51/123 (41%), Gaps = 4/123 (3%)
Query: 203 SRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTS----GKVLTMEWVEGVKLNE 258
SR +Q L + + R K + + + D+F TS +V + + G LN
Sbjct: 62 SRPFQSLIHARRTYRELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNN 121
Query: 259 QVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSET 318
V ++ + + + + L+ + G H D P N+ + +L LDFG+ +
Sbjct: 122 IVKCQALSDEHVQFLVYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDSELRILDFGLARQA 181
Query: 319 PEE 321
EE
Sbjct: 182 DEE 184
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 31.2 bits (69), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 39/85 (45%), Gaps = 17/85 (20%)
Query: 277 IQCSLRQLLEY-----GYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVV 331
I S+ + LE+ H D P N+L G++ DFG I G++V
Sbjct: 114 IAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFG------------ISGYLV 161
Query: 332 HMVNRDYEAMARDYYALDFLSPDVD 356
V +D +A + Y A + ++P+++
Sbjct: 162 DDVAKDIDAGCKPYMAPERINPELN 186
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 31.2 bits (69), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 28/59 (47%), Gaps = 12/59 (20%)
Query: 268 KVLDLVNTGIQCS-----LRQLL-------EYGYFHADPHPGNLLATPEGKLAFLDFGM 314
KVLD TG+Q S L QLL ++ H D P NLL +G L DFG+
Sbjct: 107 KVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHRILHRDLKPQNLLINSDGALKLADFGL 165
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 31.2 bits (69), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 28/59 (47%), Gaps = 12/59 (20%)
Query: 268 KVLDLVNTGIQCS-----LRQLL-------EYGYFHADPHPGNLLATPEGKLAFLDFGM 314
KVLD TG+Q S L QLL ++ H D P NLL +G L DFG+
Sbjct: 107 KVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHRILHRDLKPQNLLINSDGALKLADFGL 165
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 31.2 bits (69), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 28/123 (22%), Positives = 51/123 (41%), Gaps = 4/123 (3%)
Query: 203 SRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTS----GKVLTMEWVEGVKLNE 258
SR +Q L + + R K + + + D+F TS +V + + G LN
Sbjct: 54 SRPFQSLIHARRTYRELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNN 113
Query: 259 QVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSET 318
V ++ + + + + L+ + G H D P N+ + +L LDFG+ +
Sbjct: 114 IVKCQALSDEHVQFLVYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDCELRILDFGLARQA 173
Query: 319 PEE 321
EE
Sbjct: 174 DEE 176
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 31.2 bits (69), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 62/144 (43%), Gaps = 22/144 (15%)
Query: 201 FASRVYQELNYVQEGQNARRFKKLYADKEDVLVPDI----FWDYTSGKVLTMEWVEGVKL 256
FA R Y+EL ++ Q+ L DV P F+D+ L M +++ L
Sbjct: 66 FAKRAYRELLLLKHMQHENVIGLL-----DVFTPASSLRNFYDF----YLVMPFMQ-TDL 115
Query: 257 NEQVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMS 316
+ + ++ K+ LV ++ L+ + G H D PGNL + +L LDFG+
Sbjct: 116 QKIMGLKFSEEKIQYLVYQMLK-GLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGL-- 172
Query: 317 ETPEEARFAIIGHVVHMVNRDYEA 340
AR A ++V R Y A
Sbjct: 173 -----ARHADAEMTGYVVTRWYRA 191
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 30.8 bits (68), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 34/145 (23%), Positives = 65/145 (44%), Gaps = 9/145 (6%)
Query: 233 VPDIFWDYTSGKVL--TMEWVEGVKLNEQVAIESQGLKVLDLVNTGIQCSLRQLLEYGYF 290
V +++ Y G+ L ME+++G L + V+ + + V + +L L G
Sbjct: 104 VVEMYKSYLVGEELWVLMEFLQGGALTDIVSQVRLNEEQIATVCEAVLQALAYLHAQGVI 163
Query: 291 HADPHPGNLLATPEGKLAFLDFGMMSETPEEA--RFAIIGHVVHMVNRDYEAMARDYYA- 347
H D ++L T +G++ DFG ++ ++ R ++G M E ++R YA
Sbjct: 164 HRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKXLVGTPYWMAP---EVISRSLYAT 220
Query: 348 -LDFLSPDVDVTPIVPALRNFFDDA 371
+D S + V +V +F D+
Sbjct: 221 EVDIWSLGIMVIEMVDGEPPYFSDS 245
>pdb|3ILK|A Chain A, The Structure Of A Probable Methylase Family Protein From
Haemophilus Influenzae Rd Kw20
pdb|3ILK|B Chain B, The Structure Of A Probable Methylase Family Protein From
Haemophilus Influenzae Rd Kw20
Length = 244
Score = 30.8 bits (68), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 13/35 (37%), Positives = 21/35 (60%)
Query: 191 TTDVVALIDEFASRVYQELNYVQEGQNARRFKKLY 225
TTD +A ++ R+YQ L ++Q R+ K+LY
Sbjct: 179 TTDQLAYFFDYTERIYQSLGFIQNQGVXRKLKRLY 213
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 30.8 bits (68), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 49/98 (50%), Gaps = 5/98 (5%)
Query: 240 YTSGKV-LTMEWVEGVKLNEQVAIESQGL--KVLDLVNTGIQCSLRQLLE-YGYFHADPH 295
Y+ G++ + ME ++G L+ QV E++ + ++L V+ + L L E + H D
Sbjct: 84 YSDGEISICMEHMDGGSLD-QVLKEAKRIPEEILGKVSIAVLRGLAYLREKHQIMHRDVK 142
Query: 296 PGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHM 333
P N+L G++ DFG+ + + + +G +M
Sbjct: 143 PSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYM 180
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 30.8 bits (68), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 68/190 (35%), Gaps = 44/190 (23%)
Query: 141 LGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDE 200
G VY A+ + S I+A+KV E G++ L R V + + +++ L
Sbjct: 25 FGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSH----LRHPNILRLYGY 80
Query: 201 F--ASRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNE 258
F A+RVY L Y G R +KL + +E
Sbjct: 81 FHDATRVYLILEYAPLGTVYRELQKL-----------------------------SRFDE 111
Query: 259 QVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSET 318
Q + +L N C ++++ H D P NLL G+L DFG
Sbjct: 112 Q----RTATYITELANALSYCHSKRVI-----HRDIKPENLLLGSNGELKIADFGWSVHA 162
Query: 319 PEEARFAIIG 328
P R + G
Sbjct: 163 PSSRRDTLCG 172
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 30.8 bits (68), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 24/46 (52%), Gaps = 5/46 (10%)
Query: 269 VLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGM 314
+L L+N C R++L H D P NLL EG+L DFG+
Sbjct: 106 LLQLLNGIAYCHDRRVL-----HRDLKPQNLLINREGELKIADFGL 146
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 30.8 bits (68), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 24/46 (52%), Gaps = 5/46 (10%)
Query: 269 VLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGM 314
+L L+N C R++L H D P NLL EG+L DFG+
Sbjct: 106 LLQLLNGIAYCHDRRVL-----HRDLKPQNLLINREGELKIADFGL 146
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 30.8 bits (68), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 24/46 (52%), Gaps = 5/46 (10%)
Query: 269 VLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGM 314
+L L+N C R++L H D P NLL EG+L DFG+
Sbjct: 106 LLQLLNGIAYCHDRRVL-----HRDLKPQNLLINREGELKIADFGL 146
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 30.8 bits (68), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 39/85 (45%), Gaps = 17/85 (20%)
Query: 277 IQCSLRQLLEY-----GYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVV 331
I S+ + LE+ H D P N+L G++ DFG I G++V
Sbjct: 141 IAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKXCDFG------------ISGYLV 188
Query: 332 HMVNRDYEAMARDYYALDFLSPDVD 356
V +D +A + Y A + ++P+++
Sbjct: 189 DDVAKDIDAGCKPYXAPERINPELN 213
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 30.4 bits (67), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 39/90 (43%), Gaps = 7/90 (7%)
Query: 232 LVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFH 291
LV D W + ME++EG L + V + + V + +L L G H
Sbjct: 141 LVGDELW-------VVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIH 193
Query: 292 ADPHPGNLLATPEGKLAFLDFGMMSETPEE 321
D ++L T +G++ DFG ++ +E
Sbjct: 194 RDIKSDSILLTHDGRVKLSDFGFCAQVSKE 223
>pdb|4AX8|A Chain A, Medium Resolution Structure Of The Bifunctional Kinase-
Methyltransferase Wbdd
Length = 569
Score = 30.4 bits (67), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 13/45 (28%), Positives = 23/45 (51%)
Query: 280 SLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARF 324
SL L + G++H D P N++ +DFG + TP++ +
Sbjct: 351 SLAALEKQGFWHDDVRPWNVMVDARQHARLIDFGSIVTTPQDCSW 395
>pdb|4AZS|A Chain A, High Resolution (2.2 A) Crystal Structure Of Wbdd.
pdb|4AZT|A Chain A, Co-Crystal Structure Of Wbdd And Kinase Inhibitor
Ly294002.
pdb|4AZV|A Chain A, Co-crystal Structure Of Wbdd And Kinase Inhibitor
Gw435821x
Length = 569
Score = 30.0 bits (66), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 13/45 (28%), Positives = 23/45 (51%)
Query: 280 SLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARF 324
SL L + G++H D P N++ +DFG + TP++ +
Sbjct: 351 SLAALEKQGFWHDDVRPWNVMVDARQHARLIDFGSIVTTPQDCSW 395
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 30.0 bits (66), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 39/90 (43%), Gaps = 7/90 (7%)
Query: 232 LVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFH 291
LV D W + ME++EG L + V + + V + +L L G H
Sbjct: 218 LVGDELW-------VVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIH 270
Query: 292 ADPHPGNLLATPEGKLAFLDFGMMSETPEE 321
D ++L T +G++ DFG ++ +E
Sbjct: 271 RDIKSDSILLTHDGRVKLSDFGFCAQVSKE 300
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 30.0 bits (66), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 28/123 (22%), Positives = 51/123 (41%), Gaps = 4/123 (3%)
Query: 203 SRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTS----GKVLTMEWVEGVKLNE 258
SR +Q L + + R K + + + D+F TS +V + + G LN
Sbjct: 62 SRPFQSLIHARRTYRELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNN 121
Query: 259 QVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSET 318
V ++ + + + + L+ + G H D P N+ + +L LDFG+ +
Sbjct: 122 IVKSQALSDEHVQFLVYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDSELRILDFGLARQA 181
Query: 319 PEE 321
EE
Sbjct: 182 DEE 184
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 30.0 bits (66), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 25/54 (46%), Gaps = 7/54 (12%)
Query: 272 LVNTGIQCSLRQLLEYGYF-------HADPHPGNLLATPEGKLAFLDFGMMSET 318
L IQ RQ+LE F H D GN+L T EG + DFG+ ++
Sbjct: 114 LTEPQIQVVCRQMLEALNFLHSKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKN 167
>pdb|4AZW|A Chain A, Crystal Structure Of Monomeric Wbdd
Length = 471
Score = 30.0 bits (66), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 13/45 (28%), Positives = 23/45 (51%)
Query: 280 SLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARF 324
SL L + G++H D P N++ +DFG + TP++ +
Sbjct: 351 SLAALEKKGFWHDDVRPWNVMVDARQHARLIDFGSIVTTPQDCSW 395
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 30.0 bits (66), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 25/54 (46%), Gaps = 7/54 (12%)
Query: 272 LVNTGIQCSLRQLLEYGYF-------HADPHPGNLLATPEGKLAFLDFGMMSET 318
L IQ RQ+LE F H D GN+L T EG + DFG+ ++
Sbjct: 106 LTEPQIQVVCRQMLEALNFLHSKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKN 159
>pdb|3JVN|A Chain A, Crystal Structure Of The Acetyltransferase Vf_1542 From
Vibrio Fischeri, Northeast Structural Genomics
Consortium Target Vfr136
Length = 166
Score = 29.6 bits (65), Expect = 4.6, Method: Composition-based stats.
Identities = 20/85 (23%), Positives = 39/85 (45%), Gaps = 6/85 (7%)
Query: 179 VGFLINKYVDIITTDVVALIDEFASRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIF- 237
+GF+ + ++I+T + +Y E Y +EG + ++ + +D V +IF
Sbjct: 68 IGFITGHFCELISTVSKLVXXATIDELYIEKEYRREGVAEQLXXRIEQELKDYGVKEIFV 127
Query: 238 --WDYTSGKVLTMEWVEGVKLNEQV 260
WD+ G +E+ LNE +
Sbjct: 128 EVWDFNKG---ALEFYNKQGLNEHI 149
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 29.6 bits (65), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 23/94 (24%), Positives = 45/94 (47%), Gaps = 7/94 (7%)
Query: 240 YTSGKV-LTMEWVEGVKLNEQVAIESQGL---KVLDLVNTGIQCSLRQLLE-YGYFHADP 294
Y+ G++ + ME ++G L++ ++ G ++L V+ + L L E + H D
Sbjct: 77 YSDGEISICMEHMDGGSLDQ--VLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDV 134
Query: 295 HPGNLLATPEGKLAFLDFGMMSETPEEARFAIIG 328
P N+L G++ DFG+ + +E +G
Sbjct: 135 KPSNILVNSRGEIKLCDFGVSGQLIDEMANEFVG 168
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 29.6 bits (65), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 21/85 (24%), Positives = 38/85 (44%), Gaps = 17/85 (20%)
Query: 277 IQCSLRQLLEY-----GYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVV 331
I S+ + LE+ H D P N+L G++ DFG I G++V
Sbjct: 158 IAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFG------------ISGYLV 205
Query: 332 HMVNRDYEAMARDYYALDFLSPDVD 356
V + +A + Y A + ++P+++
Sbjct: 206 DSVAKTIDAGCKPYMAPERINPELN 230
>pdb|2AVY|O Chain O, Crystal Structure Of The Bacterial Ribosome From
Escherichia Coli At 3.5 A Resolution. This File
Contains The 30s Subunit Of One 70s Ribosome. The
Entire Crystal Structure Contains Two 70s Ribosomes And
Is Described In Remark 400.
pdb|2AW7|O Chain O, Crystal Structure Of The Bacterial Ribosome From
Escherichia Coli At 3.5 A Resolution. This File
Contains The 30s Subunit Of The Second 70s Ribosome.
The Entire Crystal Structure Contains Two 70s Ribosomes
And Is Described In Remark 400.
pdb|1VS5|O Chain O, Crystal Structure Of The Bacterial Ribosome From
Escherichia Coli In Complex With The Antibiotic
Kasugamyin At 3.5a Resolution. This File Contains The
30s Subunit Of One 70s Ribosome. The Entire Crystal
Structure Contains Two 70s Ribosomes And Is Described
In Remark 400.
pdb|1VS7|O Chain O, Crystal Structure Of The Bacterial Ribosome From
Escherichia Coli In Complex With The Antibiotic
Kasugamyin At 3.5a Resolution. This File Contains The
30s Subunit Of One 70s Ribosome. The Entire Crystal
Structure Contains Two 70s Ribosomes And Is Described
In Remark 400.
pdb|2VHO|O Chain O, Structure Of Pdf Binding Helix In Complex With The
Ribosome (Part 3 Of 4)
pdb|2VHP|O Chain O, Structure Of Pdf Binding Helix In Complex With The
Ribosome (Part 4 Of 4)
pdb|3DF1|O Chain O, Crystal Structure Of The Bacterial Ribosome From
Escherichia Coli In Complex With Hygromycin B. This
File Contains The 30s Subunit Of The First 70s
Ribosome, With Hygromycin B Bound. The Entire Crystal
Structure Contains Two 70s Ribosomes.
pdb|3DF3|O Chain O, Crystal Structure Of The Bacterial Ribosome From
Escherichia Coli In Complex With Hygromycin B. This
File Contains The 30s Subunit Of The Second 70s
Ribosome, With Hygromycin B Bound. The Entire Crystal
Structure Contains Two 70s Ribosomes.
pdb|3E1A|H Chain H, Structure Of The 30s Subunit And The Trnas Of E. Coli
Ribosome In Pre- Accommodation State
pdb|3E1C|H Chain H, Structure Of The 30s Subunit And The Trnas Of E. Coli
Ribosome In Post-Accommodation State
pdb|3KC4|O Chain O, Ribosome-Secy Complex. This Entry 3kc4 Contains 30s
Ribosomal Subnit. The 50s Ribosomal Subunit Can Be
Found In Pdb Entry 3kcr
pdb|3IZV|S Chain S, Structural Insights Into Cognate Vs. Near-Cognate
Discrimination During Decoding. This Entry Contains The
Small Subunit Of A Ribosome Programmed With A
Near-Cognate Codon, AT-Site Trna, P-Site Trna, Mrna And
Ef-Tu
pdb|3IZW|S Chain S, Structural Insights Into Cognate Vs. Near-Cognate
Discrimination During Decoding.This Entry Contains The
Small Subunit Of A Ribosome Programmed With A Cognate
Codon, AT-Site Trna, P-Site Trna, Mrna And Ef-Tu
pdb|4ADV|O Chain O, Structure Of The E. Coli Methyltransferase Ksga Bound To
The E. Coli 30s Ribosomal Subunit
Length = 89
Score = 29.6 bits (65), Expect = 5.8, Method: Composition-based stats.
Identities = 23/68 (33%), Positives = 30/68 (44%), Gaps = 11/68 (16%)
Query: 16 ARNYGSRPVQLLRRTLQILVALGSFS-----------LKLLIDQRNGVLDQNKRKRAAEL 64
A + GS VQ+ T QI G F+ L ++ QR +LD KRK A
Sbjct: 19 ANDTGSTEVQVALLTAQINHLQGHFAEHKKDHHSRRGLLRMVSQRRKLLDYLKRKDVARY 78
Query: 65 RRIFTRLG 72
R+ RLG
Sbjct: 79 TRLIERLG 86
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 29.3 bits (64), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 47/92 (51%), Gaps = 8/92 (8%)
Query: 229 EDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGL---KVLDLVNTGIQCSLRQLL 285
E+++ + ++ T+ L M+ V G +L +++ +G+ K LV + +++ L
Sbjct: 66 ENIVTLEDIYESTTHYYLVMQLVSGGELFDRIL--ERGVYTEKDASLVIQQVLSAVKYLH 123
Query: 286 EYGYFHADPHPGNLL-ATPE--GKLAFLDFGM 314
E G H D P NLL TPE K+ DFG+
Sbjct: 124 ENGIVHRDLKPENLLYLTPEENSKIMITDFGL 155
>pdb|2I2P|O Chain O, Crystal Structure Of Ribosome With Messenger Rna And The
Anticodon Stem-Loop Of P-Site Trna. This File Contains
The 30s Subunit Of One 70s Ribosome. The Entire Crystal
Structure Contains Two 70s Ribosomes And Is Described
In Remark 400.
pdb|2I2U|O Chain O, Crystal Structure Of Ribosome With Messenger Rna And The
Anticodon Stem-Loop Of P-Site Trna. This File Contains
The 30s Subunit Of One 70s Ribosome. The Entire Crystal
Structure Contains Two 70s Ribosomes And Is Described
In Remark 400.
pdb|3FIH|O Chain O, Ternary Complex-Bound E.Coli 70s Ribosome. This Entry
Consists Of The 30s Subunit, Trnas And The Ternary
Complex.
pdb|3IY8|O Chain O, Leishmania Tarentolae Mitonchondrial Ribosome Small
Subunit
pdb|2WWL|O Chain O, E.Coli 70s Ribosome Stalled During Translation Of Tnac
Leader Peptide. This File Contains The 30s, The P-Site
Trna And The Tnac Leader Peptide (Part 1 Of 2).
pdb|3J00|O Chain O, Structure Of The Ribosome-Secye Complex In The Membrane
Environment
pdb|4A2I|O Chain O, Cryo-Electron Microscopy Structure Of The 30s Subunit In
Complex With The Yjeq Biogenesis Factor
pdb|3J0U|R Chain R, Structural Characterization Of Mrna-Trna Translocation
Intermediates (30s Ribosome Of Class2 Of The Six
Classes)
pdb|3J0V|R Chain R, Structural Characterization Of Mrna-Trna Translocation
Intermediates (30s Ribosome Of Class 4a Of The Six
Classes)
pdb|3J0X|R Chain R, Structural Characterization Of Mrna-Trna Translocation
Intermediates (30s Ribosome Of Class 4b Of The Six
Classes)
pdb|3J0Z|R Chain R, Structural Characterization Of Mrna-Trna Translocation
Intermediates (30s Ribosome Of Class 5 Of The Six
Classes)
pdb|3J10|R Chain R, Structural Characterization Of Mrna-Trna Translocation
Intermediates (30s Ribosome Of Class 6 Of The Six
Classes)
pdb|3J13|Q Chain Q, Structural Characterization Of Mrna-Trna Translocation
Intermediates (30s Ribosome Of Class 3 Of The Six
Classes)
Length = 88
Score = 29.3 bits (64), Expect = 6.1, Method: Composition-based stats.
Identities = 23/68 (33%), Positives = 30/68 (44%), Gaps = 11/68 (16%)
Query: 16 ARNYGSRPVQLLRRTLQILVALGSFS-----------LKLLIDQRNGVLDQNKRKRAAEL 64
A + GS VQ+ T QI G F+ L ++ QR +LD KRK A
Sbjct: 18 ANDTGSTEVQVALLTAQINHLQGHFAEHKKDHHSRRGLLRMVSQRRKLLDYLKRKDVARY 77
Query: 65 RRIFTRLG 72
R+ RLG
Sbjct: 78 TRLIERLG 85
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 29.3 bits (64), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 21/43 (48%)
Query: 276 GIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSET 318
GI L + GY H D P N+L EG+ +D G M++
Sbjct: 142 GICRGLEAIHAKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQA 184
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 29.3 bits (64), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 33/80 (41%), Gaps = 5/80 (6%)
Query: 277 IQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPE----EARFAIIGHVV- 331
I C L L + D P N+L G + D G+ PE + R +G++
Sbjct: 295 ICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAP 354
Query: 332 HMVNRDYEAMARDYYALDFL 351
+V + + D++AL L
Sbjct: 355 EVVKNERYTFSPDWWALGCL 374
>pdb|3OPY|B Chain B, Crystal Structure Of Pichia Pastoris Phosphofructokinase
In The T- State
pdb|3OPY|D Chain D, Crystal Structure Of Pichia Pastoris Phosphofructokinase
In The T- State
pdb|3OPY|F Chain F, Crystal Structure Of Pichia Pastoris Phosphofructokinase
In The T- State
pdb|3OPY|H Chain H, Crystal Structure Of Pichia Pastoris Phosphofructokinase
In The T- State
Length = 941
Score = 29.3 bits (64), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 34/155 (21%), Positives = 64/155 (41%), Gaps = 22/155 (14%)
Query: 209 LNYVQEGQNARRFKKLYADKE-----------DVLVPDIFWDYTSGKVLTMEWVEGVKLN 257
L +VQ G A F ++YA + D P ++ + V+ V+L
Sbjct: 464 LGHVQRGGTAVAFDRIYATLQGVEAVNAVLECDADTPSPMIAIKEDQITRVPLVDAVELT 523
Query: 258 EQVA--IESQGL-KVLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGM 314
+QVA IES+ K + L ++ ++ + AD P +L K+A ++ G
Sbjct: 524 QQVAKSIESRNFKKAISLRDSEFVEHMKNFISTN--SADHVPPSLPLEKRKKIAIINVGA 581
Query: 315 MSETPEEARFAII------GHVVHMVNRDYEAMAR 343
+ A +++ GHV + ++ + +AR
Sbjct: 582 PAGGMNSAVYSMATYCMSRGHVPYAIHNGFSGLAR 616
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 29.3 bits (64), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 47/99 (47%), Gaps = 7/99 (7%)
Query: 240 YTSGKV-LTMEWVEGVKLNEQVAIESQGL---KVLDLVNTGIQCSLRQLLE-YGYFHADP 294
Y+ G++ + ME ++G L++ ++ G ++L V+ + L L E + H D
Sbjct: 93 YSDGEISICMEHMDGGSLDQ--VLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDV 150
Query: 295 HPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHM 333
P N+L G++ DFG+ + + + +G +M
Sbjct: 151 KPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYM 189
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 29.3 bits (64), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 33/80 (41%), Gaps = 5/80 (6%)
Query: 277 IQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPE----EARFAIIGHVV- 331
I C L L + D P N+L G + D G+ PE + R +G++
Sbjct: 295 ICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAP 354
Query: 332 HMVNRDYEAMARDYYALDFL 351
+V + + D++AL L
Sbjct: 355 EVVKNERYTFSPDWWALGCL 374
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 28.9 bits (63), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 13/38 (34%), Positives = 18/38 (47%)
Query: 280 SLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSE 317
+L L G H D P N+ P G+ DFG++ E
Sbjct: 169 ALAHLHSQGLVHLDVKPANIFLGPRGRCKLGDFGLLVE 206
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 28.9 bits (63), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 47/99 (47%), Gaps = 7/99 (7%)
Query: 240 YTSGKV-LTMEWVEGVKLNEQVAIESQGL---KVLDLVNTGIQCSLRQLLE-YGYFHADP 294
Y+ G++ + ME ++G L++ ++ G ++L V+ + L L E + H D
Sbjct: 74 YSDGEISICMEHMDGGSLDQ--VLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDV 131
Query: 295 HPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHM 333
P N+L G++ DFG+ + + + +G +M
Sbjct: 132 KPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYM 170
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 28.9 bits (63), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 47/99 (47%), Gaps = 7/99 (7%)
Query: 240 YTSGKV-LTMEWVEGVKLNEQVAIESQGL---KVLDLVNTGIQCSLRQLLE-YGYFHADP 294
Y+ G++ + ME ++G L++ ++ G ++L V+ + L L E + H D
Sbjct: 74 YSDGEISICMEHMDGGSLDQ--VLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDV 131
Query: 295 HPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHM 333
P N+L G++ DFG+ + + + +G +M
Sbjct: 132 KPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYM 170
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 28.9 bits (63), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 47/99 (47%), Gaps = 7/99 (7%)
Query: 240 YTSGKV-LTMEWVEGVKLNEQVAIESQGL---KVLDLVNTGIQCSLRQLLE-YGYFHADP 294
Y+ G++ + ME ++G L++ ++ G ++L V+ + L L E + H D
Sbjct: 101 YSDGEISICMEHMDGGSLDQ--VLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDV 158
Query: 295 HPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHM 333
P N+L G++ DFG+ + + + +G +M
Sbjct: 159 KPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYM 197
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 28.9 bits (63), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 22/94 (23%), Positives = 45/94 (47%), Gaps = 7/94 (7%)
Query: 240 YTSGKV-LTMEWVEGVKLNEQVAIESQGL---KVLDLVNTGIQCSLRQLLE-YGYFHADP 294
Y+ G++ + ME ++G L++ ++ G ++L V+ + L L E + H D
Sbjct: 74 YSDGEISICMEHMDGGSLDQ--VLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDV 131
Query: 295 HPGNLLATPEGKLAFLDFGMMSETPEEARFAIIG 328
P N+L G++ DFG+ + + + +G
Sbjct: 132 KPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVG 165
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.322 0.140 0.404
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,135,342
Number of Sequences: 62578
Number of extensions: 653963
Number of successful extensions: 1992
Number of sequences better than 100.0: 136
Number of HSP's better than 100.0 without gapping: 71
Number of HSP's successfully gapped in prelim test: 65
Number of HSP's that attempted gapping in prelim test: 1915
Number of HSP's gapped (non-prelim): 145
length of query: 622
length of database: 14,973,337
effective HSP length: 105
effective length of query: 517
effective length of database: 8,402,647
effective search space: 4344168499
effective search space used: 4344168499
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 54 (25.4 bits)