Your job contains 1 sequence.
>006986
MAYMCADSGNLMAVAQQVIKQKQEQEKQQQQQQQQQHQQNSDQPQQQFFGLNPYSLNPWT
SSSQHSISVSNSPNFGYGFTGPGFPDPLDTGESGFPFPQIDHHSTSGGFRFSDFGGGPGG
EFDSDEWMESLMNTAHSTDSSNLPPACDAWQNNASDFGLYATDPFTSCPSQLGSPTSELN
RVVFADSQKTILPAWPPSPPPPLVPPESAVKELAKQVSPSPSPSPSPSRVPPPNDAVGAS
TSTGFAEAELAQPLTKALIDCACLVESEPDKAVKSLVRLRGSVCAHGNPTERVAYYFTEA
LYKRLTQRAEKSITTLEANCEDCILSFKTLNDACPYSKFAYLTANQAILEATENASHIHI
VDFGIVQGIQWSFLLQALANRPTGKPVKVRISGIPAPALGKSPAASLLATGDRLREFAGS
LSLNLEFEPILIPIRKLRASSFRVDPNEALVVNFMLQLNSLLDDNRLAVENALQMAKSLN
PIVVTLAEYEANLNRTGFLARFKNALKYYTAVFESLEPNMTTDSDERFQVERQILGPRIA
NLLAPEKQGAKRERVEDIENWRIFMENSDFEGIPFSHYALSQAEILLWNYNYSPLFTLNQ
SHDNLLTLSWKKVPLLTVSSWR
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 006986
(622 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2174974 - symbol:AT5G66770 "AT5G66770" species... 1167 7.1e-141 2
TAIR|locus:2101694 - symbol:AT3G50650 "AT3G50650" species... 1050 1.9e-120 3
TAIR|locus:2008076 - symbol:SCL5 "AT1G50600" species:3702... 515 1.8e-52 2
TAIR|locus:2099624 - symbol:RGL2 "RGA-like 2" species:370... 510 4.2e-51 2
TAIR|locus:2164783 - symbol:PAT1 "AT5G48150" species:3702... 496 2.0e-47 1
TAIR|locus:2020487 - symbol:LAS "AT1G55580" species:3702 ... 436 2.3e-46 2
TAIR|locus:2026982 - symbol:SCL1 "AT1G21450" species:3702... 479 1.3e-45 1
TAIR|locus:2157477 - symbol:RGL3 "RGA-like protein 3" spe... 475 3.4e-45 1
TAIR|locus:2044973 - symbol:SCL21 "AT2G04890" species:370... 459 1.7e-43 1
TAIR|locus:2080345 - symbol:SCR "SCARECROW" species:3702 ... 457 2.8e-43 1
TAIR|locus:2132482 - symbol:AT4G08250 "AT4G08250" species... 439 2.2e-41 1
TAIR|locus:2201557 - symbol:RGL1 "RGA-like 1" species:370... 439 2.2e-41 1
TAIR|locus:2015243 - symbol:AT1G63100 "AT1G63100" species... 440 3.2e-41 1
TAIR|locus:2006747 - symbol:GAI "GIBBERELLIC ACID INSENSI... 435 5.9e-41 1
TAIR|locus:2005516 - symbol:RGA1 "REPRESSOR OF GA1-3 1" s... 434 7.5e-41 1
TAIR|locus:2025022 - symbol:SCL14 "SCARECROW-like 14" spe... 433 5.3e-40 1
TAIR|locus:2165685 - symbol:AT5G41920 "AT5G41920" species... 423 1.1e-39 1
TAIR|locus:2075155 - symbol:AT3G46600 species:3702 "Arabi... 409 3.4e-38 1
TAIR|locus:2148293 - symbol:AT5G59450 species:3702 "Arabi... 396 1.8e-36 1
TAIR|locus:2025032 - symbol:AT1G07520 "AT1G07520" species... 372 2.4e-32 1
TAIR|locus:2008086 - symbol:SCL3 "AT1G50420" species:3702... 220 4.4e-30 2
TAIR|locus:2040701 - symbol:AT2G37650 species:3702 "Arabi... 345 7.9e-29 1
TAIR|locus:2101801 - symbol:HAM2 "AT3G60630" species:3702... 326 1.7e-26 2
TAIR|locus:2120106 - symbol:SHR "AT4G37650" species:3702 ... 305 1.3e-24 1
TAIR|locus:2126901 - symbol:HAM3 "AT4G00150" species:3702... 299 7.9e-24 1
TAIR|locus:2055622 - symbol:HAM1 "AT2G45160" species:3702... 299 1.2e-23 1
UNIPROTKB|Q84MM9 - symbol:MOC1 "Protein MONOCULM 1" speci... 275 1.6e-21 1
TAIR|locus:2083073 - symbol:AT3G49950 "AT3G49950" species... 264 2.0e-20 1
TAIR|locus:2184625 - symbol:SCL8 "AT5G52510" species:3702... 254 4.5e-18 2
UNIPROTKB|Q6DLS1 - symbol:SCL1 "SCARECROW-like protein" s... 215 1.4e-14 1
TAIR|locus:2115340 - symbol:HAM4 "AT4G36710" species:3702... 214 2.1e-14 1
TAIR|locus:2087994 - symbol:AT3G13840 "AT3G13840" species... 186 3.0e-11 1
TAIR|locus:1009023400 - symbol:AT5G67411 "AT5G67411" spec... 150 8.9e-10 1
>TAIR|locus:2174974 [details] [associations]
symbol:AT5G66770 "AT5G66770" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] Pfam:PF03514 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0003700 GO:GO:0006351 EMBL:AB010700
InterPro:IPR005202 PROSITE:PS50985 EMBL:AY062538 EMBL:BT002580
IPI:IPI00537848 RefSeq:NP_201478.1 UniGene:At.27307
ProteinModelPortal:Q9FL03 IntAct:Q9FL03 PRIDE:Q9FL03
EnsemblPlants:AT5G66770.1 GeneID:836810 KEGG:ath:AT5G66770
GeneFarm:4249 TAIR:At5g66770 eggNOG:NOG324692 HOGENOM:HOG000240374
InParanoid:Q9FL03 OMA:DASCSAP PhylomeDB:Q9FL03
ProtClustDB:CLSN2684429 Genevestigator:Q9FL03 Uniprot:Q9FL03
Length = 584
Score = 1167 (415.9 bits), Expect = 7.1e-141, Sum P(2) = 7.1e-141
Identities = 225/374 (60%), Positives = 292/374 (78%)
Query: 249 ELAQPLTKALIDCACLVESEPDKAVKSLVRLRGSVCAHGNPTERVAYYFTEALYKRLTQR 308
+L PL KA+ DCA + +S+P++A K+L+++R SV G+PTERVA+YFTEAL RL+
Sbjct: 212 DLEPPLLKAIYDCARISDSDPNEASKTLLQIRESVSELGDPTERVAFYFTEALSNRLSPN 271
Query: 309 AEKSITTLEANCEDCILSFKTLNDACPYSKFAYLTANQAILEATENASHIHIVDFGIVQG 368
+ + ++ ++ ED ILS+KTLNDACPYSKFA+LTANQAILEATE ++ IHIVDFGIVQG
Sbjct: 272 SPATSSS-SSSTEDLILSYKTLNDACPYSKFAHLTANQAILEATEKSNKIHIVDFGIVQG 330
Query: 369 IQWSFLLQALANRPTGKPVKVRISGIPAPALGKSPAASLLATGDRLREFAGSLSLNLEFE 428
IQW LLQALA R +GKP ++R+SGIPAP+LG+SP SL+ATG+RLR+FA L LN +F
Sbjct: 331 IQWPALLQALATRTSGKPTQIRVSGIPAPSLGESPEPSLIATGNRLRDFAKVLDLNFDFI 390
Query: 429 PILIPIRKLRASSFRVDPNEALVVNFMLQLNSLLDDNRLAVENALQMAKSLNPIVVTLAE 488
PIL PI L SSFRVDP+E L VNFMLQL LLD+ V+ AL++AKSLNP VVTL E
Sbjct: 391 PILTPIHLLNGSSFRVDPDEVLAVNFMLQLYKLLDETPTIVDTALRLAKSLNPRVVTLGE 450
Query: 489 YEANLNRTGFLARFKNALKYYTAVFESLEPNMTTDSDERFQVERQILGPRIANLLAPEKQ 548
YE +LNR GF R KNAL++Y+AVFESLEPN+ DS+ER +VER++ G RI+ L+ PEK
Sbjct: 451 YEVSLNRVGFANRVKNALQFYSAVFESLEPNLGRDSEERVRVERELFGRRISGLIGPEKT 510
Query: 549 GAKRERVEDIENWRIFMENSDFEGIPFSHYALSQAEILLWNYNYSPLFTLNQSHDNLLTL 608
G RER+E+ E WR+ MEN+ FE + S+YA+SQA+ILLWNYNYS L+++ +S ++L
Sbjct: 511 GIHRERMEEKEQWRVLMENAGFESVKLSNYAVSQAKILLWNYNYSNLYSIVESKPGFISL 570
Query: 609 SWKKVPLLTVSSWR 622
+W +PLLT+SSWR
Sbjct: 571 AWNDLPLLTLSSWR 584
Score = 232 (86.7 bits), Expect = 7.1e-141, Sum P(2) = 7.1e-141
Identities = 63/197 (31%), Positives = 81/197 (41%)
Query: 1 MAYMCADSGNLMAVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFFGLNPYSLNPWT 60
MAYMC DSGNLMA+A FG+NP SLNPW
Sbjct: 1 MAYMCTDSGNLMAIAQQVIKQKQQQEQQQQQHHQDHQ----------IFGINPLSLNPWP 50
Query: 61 XXXXXXXXXXXXPNFGYGFTGPGFPDPL------DTGESGFPFPQIDHHXXXXXXXXXXX 114
+ G+G +G FPDP D+ + GFPFP +DHH
Sbjct: 51 NT-----------SLGFGLSGSAFPDPFQVTGGGDSNDPGFPFPNLDHHHATTTGGGFRL 99
Query: 115 XXXXXXXXX----XXEWMESLMNTAHSTDSSNLPPACDAWQNNASDFGLYATDPFTSCPS 170
EWME+L++ S P CD W +N D+ +Y DPF + PS
Sbjct: 100 SDFGGGTGGGEFESDEWMETLISGGDSVADG---PDCDTWHDNP-DYVIYGPDPFDTYPS 155
Query: 171 QLGSPTSELNRVVFADS 187
+L S+LNRV+ S
Sbjct: 156 RLSVQPSDLNRVIDTSS 172
>TAIR|locus:2101694 [details] [associations]
symbol:AT3G50650 "AT3G50650" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] Pfam:PF03514 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0003700 GO:GO:0006351 EMBL:AL132979
InterPro:IPR005202 PROSITE:PS50985 HOGENOM:HOG000240374
ProtClustDB:CLSN2684429 EMBL:AK229252 EMBL:AF036304 IPI:IPI00542878
PIR:T46142 PIR:T51238 RefSeq:NP_190634.1 UniGene:At.42939
PaxDb:Q9SCR0 PRIDE:Q9SCR0 EnsemblPlants:AT3G50650.1 GeneID:824228
KEGG:ath:AT3G50650 GeneFarm:4248 TAIR:At3g50650 eggNOG:NOG329237
InParanoid:Q9SCR0 OMA:LIRIKES PhylomeDB:Q9SCR0
Genevestigator:Q9SCR0 Uniprot:Q9SCR0
Length = 542
Score = 1050 (374.7 bits), Expect = 1.9e-120, Sum P(3) = 1.9e-120
Identities = 212/378 (56%), Positives = 276/378 (73%)
Query: 249 ELAQPLTKALIDCACLVESEPDKAVKSLVRLRGSVCAHGNPTERVAYYFTEALYKRLTQR 308
+L QP+ KA+ D A E++PD +L+R++ SV G+P +RV YYF EAL + T+
Sbjct: 172 DLNQPIFKAIHDYARKPETKPD----TLIRIKESVSESGDPIQRVGYYFAEALSHKETES 227
Query: 309 AEKSITTLEANCEDCILSFKTLNDACPYSKFAYLTANQAILEATENASHIHIVDFGIVQG 368
S ++ + ED ILS+KTLNDACPYSKFA+LTANQAILEAT +++IHIVDFGI QG
Sbjct: 228 PSSSSSS---SLEDFILSYKTLNDACPYSKFAHLTANQAILEATNQSNNIHIVDFGIFQG 284
Query: 369 IQWSFLLQALANRPTGKPVKVRISGIPAPALGKSPAASLLATGDRLREFAGSLSLNLEFE 428
IQWS LLQALA R +GKP ++RISGIPAP+LG SP SL+ATG+RLR+FA L LN EF
Sbjct: 285 IQWSALLQALATRSSGKPTRIRISGIPAPSLGDSPGPSLIATGNRLRDFAAILDLNFEFY 344
Query: 429 PILIPIRKLRASSFRVDPNEALVVNFMLQLNSLLDDNRLAVENALQMAKSLNPIVVTLAE 488
P+L PI+ L SSFRVDP+E LVVNFML+L LLD+ V AL++A+SLNP +VTL E
Sbjct: 345 PVLTPIQLLNGSSFRVDPDEVLVVNFMLELYKLLDETATTVGTALRLARSLNPRIVTLGE 404
Query: 489 YEANLNRTGFLARFKNALKYYTAVFESLEPNMTTDSDERFQVERQILGPRIANLLAPE-- 546
YE +LNR F R KN+L++Y+AVFESLEPN+ DS ER +VER + G RI +L+ +
Sbjct: 405 YEVSLNRVEFANRVKNSLRFYSAVFESLEPNLDRDSKERLRVERVLFGRRIMDLVRSDDD 464
Query: 547 --KQGAKRERVEDIENWRIFMENSDFEGIPFSHYALSQAEILLWNYNYSPLFTLNQSHDN 604
K G + +E+ E WR+ ME + FE + S+YA+SQA++LLWNYNYS L++L +S
Sbjct: 465 NNKPGTRFGLMEEKEQWRVLMEKAGFEPVKPSNYAVSQAKLLLWNYNYSTLYSLVESEPG 524
Query: 605 LLTLSWKKVPLLTVSSWR 622
++L+W VPLLTVSSWR
Sbjct: 525 FISLAWNNVPLLTVSSWR 542
Score = 98 (39.6 bits), Expect = 1.9e-120, Sum P(3) = 1.9e-120
Identities = 22/70 (31%), Positives = 32/70 (45%)
Query: 73 PNFGYGFTGPGFPDPLD-TGESGFPFPQIDHHXXXXXXXXXXXXXXXXXXXXXXEWMESL 131
P+FG+ G GF DP T + GF FP ++HH EWMESL
Sbjct: 45 PSFGFTLPGSGFSDPFQVTNDPGFHFPHLEHHQNAAVASEEFDSD---------EWMESL 95
Query: 132 MNTAHSTDSS 141
+N ++ ++
Sbjct: 96 INGGDASQTN 105
Score = 92 (37.4 bits), Expect = 8.2e-120, Sum P(3) = 8.2e-120
Identities = 29/62 (46%), Positives = 33/62 (53%)
Query: 126 EWMESLMNTAHSTDSSNLPPACDAWQNNASDFGLYATDPFTSCPSQLGSPTSELNRVVFA 185
EWMESL+N DA Q N DF +Y DPF S PS+L +P S LNRV
Sbjct: 90 EWMESLINGG------------DASQTNP-DFPIYGHDPFVSFPSRLSAP-SYLNRVNKD 135
Query: 186 DS 187
DS
Sbjct: 136 DS 137
Score = 72 (30.4 bits), Expect = 1.9e-120, Sum P(3) = 1.9e-120
Identities = 13/15 (86%), Positives = 14/15 (93%)
Query: 1 MAYMCADSGNLMAVA 15
MAYMC DSGNLMA+A
Sbjct: 1 MAYMCTDSGNLMAIA 15
>TAIR|locus:2008076 [details] [associations]
symbol:SCL5 "AT1G50600" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0005829 "cytosol" evidence=IDA] Pfam:PF03514
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0005634
GO:GO:0003700 GO:GO:0006351 EMBL:AC079279 EMBL:AC012561
HOGENOM:HOG000238577 InterPro:IPR005202 PROSITE:PS50985
eggNOG:NOG287245 EMBL:AY034929 EMBL:AY039611 EMBL:BT000883
EMBL:AF036302 IPI:IPI00519165 PIR:E96542 PIR:T51236
RefSeq:NP_175475.2 UniGene:At.14827 STRING:Q8H125 PaxDb:Q8H125
PRIDE:Q8H125 EnsemblPlants:AT1G50600.1 GeneID:841482
KEGG:ath:AT1G50600 GeneFarm:4229 TAIR:At1g50600 InParanoid:Q8H125
OMA:REERHEP PhylomeDB:Q8H125 ProtClustDB:CLSN2918355
ArrayExpress:Q8H125 Genevestigator:Q8H125 Uniprot:Q8H125
Length = 597
Score = 515 (186.3 bits), Expect = 1.8e-52, Sum P(2) = 1.8e-52
Identities = 142/398 (35%), Positives = 198/398 (49%)
Query: 238 GASTSTGFAEAELAQ--PLTKALIDCACLVESEPDKAVKSLV-RLRGSVCAHGNPTERVA 294
G +S + E+ L L +CA VE+ + L+ +L+ V G P +R+
Sbjct: 209 GVVSSAMYRSMEMISRGDLKGVLYECAKAVENYDLEMTDWLISQLQQMVSVSGEPVQRLG 268
Query: 295 YYFTEALYKRLTQRAEKSITTLEANCEDC----ILSFK-TLNDACPYSKFAYLTANQAIL 349
Y E L RL L C+D +L++ L +ACPY KF Y +AN AI
Sbjct: 269 AYMLEGLVARLASSGSSIYKALR--CKDPTGPELLTYMHILYEACPYFKFGYESANGAIA 326
Query: 350 EATENASHIHIVDFGIVQGIQWSFLLQALANRPTGKPVKVRISGIPAPALGKSPAASLLA 409
EA +N S +HI+DF I QG QW L++AL RP G P VRI+GI P + L
Sbjct: 327 EAVKNESFVHIIDFQISQGGQWVSLIRALGARPGGPP-NVRITGIDDPRSSFARQGGLEL 385
Query: 410 TGDRLREFAGSLSLNLEFEPILIPIRKLRASSFRVDPNEALVVNFMLQLNSLLDDNRLAV 469
G RL + A + EF + ++ V EAL VNF L L+ + D++ + V
Sbjct: 386 VGQRLGKLAEMCGVPFEFHGAALCCTEVEIEKLGVRNGEALAVNFPLVLHHMPDES-VTV 444
Query: 470 EN----ALQMAKSLNPIVVTLAEYEANLNRTGFLARFKNALKYYTAVFESLEPNMTTDSD 525
EN L++ K L+P VVTL E EAN N FL RF + +Y AVFES++ + D
Sbjct: 445 ENHRDRLLRLVKHLSPNVVTLVEQEANTNTAPFLPRFVETMNHYLAVFESIDVKLARDHK 504
Query: 526 ERFQVERQILGPRIANLLAPEKQGAKRE-RVEDIENWRIFMENSDFEGIPFSHYALSQAE 584
ER VE+ L + NL+A E G +RE R E + WR + F+ P S Y + +
Sbjct: 505 ERINVEQHCLAREVVNLIACE--GVEREERHEPLGKWRSRFHMAGFKPYPLSSYVNATIK 562
Query: 585 ILLWNYNYSPLFTLNQSHDNLLTLSWKKVPLLTVSSWR 622
LL +YS +TL + D L L WK PL+T +WR
Sbjct: 563 GLL--ESYSEKYTLEE-RDGALYLGWKNQPLITSCAWR 597
Score = 46 (21.3 bits), Expect = 1.8e-52, Sum P(2) = 1.8e-52
Identities = 15/49 (30%), Positives = 23/49 (46%)
Query: 133 NTAHSTD-SSNLPPACDAWQNNASDFGLYATDPFTSCPSQLGSPTSELN 180
N++ +T SSN P A NN S F ++ + + P GS + N
Sbjct: 127 NSSSTTSFSSNESPISQANNNNLSRFNNHSPEENNNSPLS-GSSATNTN 174
>TAIR|locus:2099624 [details] [associations]
symbol:RGL2 "RGA-like 2" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA;TAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS;TAS] [GO:0009740 "gibberellic acid mediated signaling
pathway" evidence=RCA;TAS] [GO:0010187 "negative regulation of seed
germination" evidence=IMP] [GO:0009938 "negative regulation of
gibberellic acid mediated signaling pathway" evidence=TAS]
[GO:0009651 "response to salt stress" evidence=IGI] [GO:0009723
"response to ethylene stimulus" evidence=IGI;RCA] [GO:0009737
"response to abscisic acid stimulus" evidence=IEP;IGI;RCA]
[GO:0042538 "hyperosmotic salinity response" evidence=IGI;RCA]
[GO:0010029 "regulation of seed germination" evidence=IGI]
[GO:2000033 "regulation of seed dormancy process" evidence=IGI]
[GO:0009739 "response to gibberellin stimulus" evidence=IEP]
[GO:2000377 "regulation of reactive oxygen species metabolic
process" evidence=IGI] [GO:0009863 "salicylic acid mediated
signaling pathway" evidence=IGI;RCA] [GO:0009867 "jasmonic acid
mediated signaling pathway" evidence=IGI;RCA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0009062 "fatty acid catabolic process"
evidence=RCA] [GO:0009686 "gibberellin biosynthetic process"
evidence=RCA] [GO:0009793 "embryo development ending in seed
dormancy" evidence=RCA] [GO:0009845 "seed germination"
evidence=RCA] [GO:0010162 "seed dormancy process" evidence=RCA]
[GO:0010325 "raffinose family oligosaccharide biosynthetic process"
evidence=RCA] [GO:0048444 "floral organ morphogenesis"
evidence=RCA] [GO:0048608 "reproductive structure development"
evidence=RCA] Pfam:PF03514 GO:GO:0009737 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0030154 GO:GO:0006952
GO:GO:0009723 GO:GO:0003700 GO:GO:0006351 GO:GO:0010187
GO:GO:0009908 GO:GO:0042538 EMBL:AC009895 GO:GO:2000377
GO:GO:0040029 GO:GO:0009867 GO:GO:0009863 GO:GO:0009740
eggNOG:NOG243696 HOGENOM:HOG000238577 KO:K14494 GO:GO:0009938
GO:GO:2000033 InterPro:IPR021914 InterPro:IPR005202 Pfam:PF12041
PROSITE:PS50985 EMBL:AK118009 IPI:IPI00521981 RefSeq:NP_186995.1
UniGene:At.18489 UniGene:At.67027 ProteinModelPortal:Q8GXW1
SMR:Q8GXW1 IntAct:Q8GXW1 STRING:Q8GXW1 EnsemblPlants:AT3G03450.1
GeneID:821251 KEGG:ath:AT3G03450 GeneFarm:4240 TAIR:At3g03450
InParanoid:Q8GXW1 OMA:MLSELNN PhylomeDB:Q8GXW1
ProtClustDB:CLSN2684085 Genevestigator:Q8GXW1 GermOnline:AT3G03450
Uniprot:Q8GXW1
Length = 547
Score = 510 (184.6 bits), Expect = 4.2e-51, Sum P(2) = 4.2e-51
Identities = 133/376 (35%), Positives = 205/376 (54%)
Query: 254 LTKALIDCACLVESEPDKAVKSLVRLRGSVC-AHGNPTERVAYYFTEALYKRLTQ--RAE 310
L AL+ CA + E +LV+ G++ + +VA YF +AL +R+ + AE
Sbjct: 180 LVHALVACAEAIHQENLNLADALVKRVGTLAGSQAGAMGKVATYFAQALARRIYRDYTAE 239
Query: 311 KSI-TTLEANCEDCILSFKTLNDACPYSKFAYLTANQAILEATENASHIHIVDFGIVQGI 369
+ + + E+ +L ++CPY KFA+ TANQAILEA A +H++D G+ QG+
Sbjct: 240 TDVCAAVNPSFEE-VLEMH-FYESCPYLKFAHFTANQAILEAVTTARRVHVIDLGLNQGM 297
Query: 370 QWSFLLQALANRPTGKPVKVRISGIPAPALGKSPAASLLATGDRLREFAGSLSLNLEFEP 429
QW L+QALA RP G P R++GI P S SL G +L +FA ++ + EF+
Sbjct: 298 QWPALMQALALRPGGPP-SFRLTGIGPPQTENSD--SLQQLGWKLAQFAQNMGVEFEFKG 354
Query: 430 ILIP-IRKLRASSFRVDP-NEALVVNFMLQLNSLLDDNRLAVENALQMAKSLNPIVVTLA 487
+ + L F P +E LVVN + +L+ LL + ++E L K++ P +VT+
Sbjct: 355 LAAESLSDLEPEMFETRPESETLVVNSVFELHRLLARSG-SIEKLLNTVKAIKPSIVTVV 413
Query: 488 EYEANLNRTGFLARFKNALKYYTAVFESLEPNMTTDSDERFQVERQILGPRIANLLAPEK 547
E EAN N FL RF AL YY+++F+SLE + + S +R E LG +I N++A E
Sbjct: 414 EQEANHNGIVFLDRFNEALHYYSSLFDSLEDSYSLPSQDRVMSE-VYLGRQILNVVAAE- 471
Query: 548 QGAKR-ERVEDIENWRIFMENSDFEGIPFSHYALSQAEILLWNYNYSPLFTLNQSHDNLL 606
G+ R ER E WRI M+++ F+ I A QA +LL Y + + ++ D L
Sbjct: 472 -GSDRVERHETAAQWRIRMKSAGFDPIHLGSSAFKQASMLLSLYATGDGYRVEEN-DGCL 529
Query: 607 TLSWKKVPLLTVSSWR 622
+ W+ PL+T S+W+
Sbjct: 530 MIGWQTRPLITTSAWK 545
Score = 38 (18.4 bits), Expect = 4.2e-51, Sum P(2) = 4.2e-51
Identities = 9/19 (47%), Positives = 9/19 (47%)
Query: 76 GYGFTGPGFPDPLDTGESG 94
GYG T P PL SG
Sbjct: 4 GYGETWDPPPKPLPASRSG 22
>TAIR|locus:2164783 [details] [associations]
symbol:PAT1 "AT5G48150" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0004871 "signal transducer activity" evidence=IMP] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0009640 "photomorphogenesis"
evidence=IMP] Pfam:PF03514 GO:GO:0005737 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0003700 GO:GO:0006351 GO:GO:0009640
GO:GO:0004871 EMBL:AB023039 HOGENOM:HOG000238577 InterPro:IPR005202
PROSITE:PS50985 EMBL:AF153443 EMBL:BT025326 EMBL:AK117483
IPI:IPI00517897 RefSeq:NP_199626.1 RefSeq:NP_974903.1
UniGene:At.7076 PRIDE:Q9LDL7 EnsemblPlants:AT5G48150.1
EnsemblPlants:AT5G48150.2 GeneID:834867 KEGG:ath:AT5G48150
GeneFarm:4233 TAIR:At5g48150 eggNOG:NOG287245 InParanoid:Q9LDL7
OMA:NSAHARG PhylomeDB:Q9LDL7 ProtClustDB:CLSN2686580
Genevestigator:Q9LDL7 Uniprot:Q9LDL7
Length = 490
Score = 496 (179.7 bits), Expect = 2.0e-47, P = 2.0e-47
Identities = 130/386 (33%), Positives = 192/386 (49%)
Query: 247 EAELAQPLTKALIDCA-CLVESEPDKAVKSLVRLRGSVCAHGNPTERVAYYFTEALYKRL 305
EA + L L+ CA + E++ A + +LR V G P +R+ Y E L +L
Sbjct: 112 EAISRRDLRADLVSCAKAMSENDLMMAHSMMEKLRQMVSVSGEPIQRLGAYLLEGLVAQL 171
Query: 306 TQRAEKSITTLEANCEDC---ILSFK-TLNDACPYSKFAYLTANQAILEATENASHIHIV 361
L E +LS+ L + CPY KF Y++AN AI EA + + +HI+
Sbjct: 172 ASSGSSIYKALNRCPEPASTELLSYMHILYEVCPYFKFGYMSANGAIAEAMKEENRVHII 231
Query: 362 DFGIVQGIQWSFLLQALANRPTGKPVKVRISGIPAPALGKSPAASLLATGDRLREFAGSL 421
DF I QG QW L+QA A RP G P ++RI+GI + L G+RL + A
Sbjct: 232 DFQIGQGSQWVTLIQAFAARPGGPP-RIRITGIDDMTSAYARGGGLSIVGNRLAKLAKQF 290
Query: 422 SLNLEFEPILIPIRKLRASSFRVDPNEALVVNFMLQLNSLLDDNRLAVEN----ALQMAK 477
++ EF + + + +++ + V P EAL VNF L+ + D++ ++ EN L+M K
Sbjct: 291 NVPFEFNSVSVSVSEVKPKNLGVRPGEALAVNFAFVLHHMPDES-VSTENHRDRLLRMVK 349
Query: 478 SLNPIVVTLAEYEANLNRTGFLARFKNALKYYTAVFESLEPNMTTDSDERFQVERQILGP 537
SL+P VVTL E E+N N F RF + YY A+FES++ + D +R VE+ L
Sbjct: 350 SLSPKVVTLVEQESNTNTAAFFPRFMETMNYYAAMFESIDVTLPRDHKQRINVEQHCLAR 409
Query: 538 RIANLLAPEKQGAKR-ERVEDIENWRIFMENSDFEGIPFSHYALSQAEILLWNYNYSPLF 596
+ N++A E GA R ER E + WR + F P S S + LL NYS +
Sbjct: 410 DVVNIIACE--GADRVERHELLGKWRSRFGMAGFTPYPLSPLVNSTIKSLL--RNYSDKY 465
Query: 597 TLNQSHDNLLTLSWKKVPLLTVSSWR 622
L + D L L W L+ +W+
Sbjct: 466 RLEE-RDGALYLGWMHRDLVASCAWK 490
>TAIR|locus:2020487 [details] [associations]
symbol:LAS "AT1G55580" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0010223 "secondary shoot formation" evidence=IMP]
Pfam:PF03514 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0003700 GO:GO:0006351 EMBL:AC002328 GO:GO:0010223
HOGENOM:HOG000238577 InterPro:IPR005202 PROSITE:PS50985
eggNOG:NOG323432 EMBL:AY196482 EMBL:BT026519 EMBL:EF598379
EMBL:EF598380 EMBL:EF598381 EMBL:EF598382 EMBL:EF598383
EMBL:EF598384 EMBL:EF598385 EMBL:EF598386 EMBL:EF598387
EMBL:EF598388 EMBL:EF598389 EMBL:EF598390 EMBL:EF598391
EMBL:EF598392 EMBL:EF598393 EMBL:EF598394 EMBL:EF598395
EMBL:EF598396 EMBL:EF598397 EMBL:EF598398 EMBL:EF598399
EMBL:EF598400 EMBL:EF598401 EMBL:EF598402 IPI:IPI00532485
RefSeq:NP_175954.1 UniGene:At.45199 STRING:Q9ZWC5
EnsemblPlants:AT1G55580.1 GeneID:842007 KEGG:ath:AT1G55580
GeneFarm:4247 TAIR:At1g55580 InParanoid:Q9ZWC5 OMA:EREANHG
PhylomeDB:Q9ZWC5 ProtClustDB:CLSN2682663 Genevestigator:Q9ZWC5
Uniprot:Q9ZWC5
Length = 445
Score = 436 (158.5 bits), Expect = 2.3e-46, Sum P(2) = 2.3e-46
Identities = 113/314 (35%), Positives = 170/314 (54%)
Query: 321 EDCILSFKTLNDACPYSKFAYLTANQAILEATENASH--IHIVDFGIVQGIQWSFLLQAL 378
E C + LN P+ +F +LTANQAIL+ATE + +HI+D I QG+QW L+QAL
Sbjct: 142 ESCY--YLWLNQLTPFIRFGHLTANQAILDATETNDNGALHILDLDISQGLQWPPLMQAL 199
Query: 379 ANR---PTGKPVKVRISGIPAPALGKSPAASLLATGDRLREFAGSLSLNLEFEPILIP-- 433
A R P+ P +RI+G G L TGDRL FA SL L +F ++I
Sbjct: 200 AERSSNPSSPPPSLRITGCGRDVTG------LNRTGDRLTRFADSLGLQFQFHTLVIVEE 253
Query: 434 -----IRKLRASSFRVDPNEALVVNFMLQLNSLLDDNRLAVENALQMAKSLNPIVVTLAE 488
+ ++R + E + VN + L+ + +D+ + + L KSLN +VT+AE
Sbjct: 254 DLAGLLLQIRLLALSAVQGETIAVNCVHFLHKIFNDDGDMIGHFLSAIKSLNSRIVTMAE 313
Query: 489 YEANLNRTGFLARFKNALKYYTAVFESLEPNMTTDSDERFQVERQILGPRIANLLAPEKQ 548
EAN FL RF A+ +Y A+F+SLE + +S ER +E++ G I +++A E+
Sbjct: 314 REANHGDHSFLNRFSEAVDHYMAIFDSLEATLPPNSRERLTLEQRWFGKEILDVVAAEET 373
Query: 549 GAKRERVEDIENWRIFMENSDFEGIPFSHYALSQAEILLWNYNYSPLFTLNQSHDNLLTL 608
+++R E W M+ F +P +ALSQA++LL + S + L Q +N L L
Sbjct: 374 -ERKQRHRRFEIWEEMMKRFGFVNVPIGSFALSQAKLLLRLHYPSEGYNL-QFLNNSLFL 431
Query: 609 SWKKVPLLTVSSWR 622
W+ PL +VSSW+
Sbjct: 432 GWQNRPLFSVSSWK 445
Score = 67 (28.6 bits), Expect = 2.3e-46, Sum P(2) = 2.3e-46
Identities = 25/105 (23%), Positives = 48/105 (45%)
Query: 246 AEAELAQPLTKALIDCACLVESEPDKAVKSLVRLRG-SVCAHGNPTERVAYYFTEALYKR 304
A + L + L A V A ++L+ + + HG+ TER+ + FT+AL R
Sbjct: 33 AATSASHHLRRLLFTAANFVSQSNFTAAQNLLSILSLNSSPHGDSTERLVHLFTKALSVR 92
Query: 305 LT-QRAEKSITTLEA-NCEDCILSFKTL--NDACPYSKFAYLTAN 345
+ Q+ +++ T+ + +S T+ + C +F + T N
Sbjct: 93 INRQQQDQTAETVATWTTNEMTMSNSTVFTSSVCK-EQFLFRTKN 136
>TAIR|locus:2026982 [details] [associations]
symbol:SCL1 "AT1G21450" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] Pfam:PF03514 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003700 GO:GO:0006351
EMBL:AC015447 HOGENOM:HOG000238577 InterPro:IPR005202
PROSITE:PS50985 EMBL:AF210731 EMBL:AY045833 EMBL:AY096626
EMBL:AY084492 EMBL:AF036300 IPI:IPI00538394 PIR:E86347 PIR:T51234
RefSeq:NP_173566.1 UniGene:At.14825 ProteinModelPortal:Q9SDQ3
STRING:Q9SDQ3 PaxDb:Q9SDQ3 PRIDE:Q9SDQ3 EnsemblPlants:AT1G21450.1
GeneID:838743 KEGG:ath:AT1G21450 GeneFarm:4232 TAIR:At1g21450
eggNOG:NOG324880 InParanoid:Q9SDQ3 OMA:SINDEWA PhylomeDB:Q9SDQ3
ProtClustDB:CLSN2913658 Genevestigator:Q9SDQ3 Uniprot:Q9SDQ3
Length = 593
Score = 479 (173.7 bits), Expect = 1.3e-45, P = 1.3e-45
Identities = 125/398 (31%), Positives = 203/398 (51%)
Query: 235 DAVGASTSTGFAEAELAQPLT--KALIDCA-CLVESEPDKAVKSLVRLRGSVCAHGNPTE 291
++ A +++ + E+ T + LI CA L E + ++A+ + LR V G+P++
Sbjct: 201 ESSSADSNSHVSSKEVVSQATPKQILISCARALSEGKLEEALSMVNELRQIVSIQGDPSQ 260
Query: 292 RVAYYFTEALYKRLTQRAE---KSITTLEANCEDCILSFKTLNDACPYSKFAYLTANQAI 348
R+A Y E L R+ + +++ E ++ + + + L + CP KF +L AN AI
Sbjct: 261 RIAAYMVEGLAARMAASGKFIYRALKCKEPPSDERLAAMQVLFEVCPCFKFGFLAANGAI 320
Query: 349 LEATENASHIHIVDFGIVQGIQWSFLLQALANRPTGKPVKVRISGIPAPALGKSPAASLL 408
LEA + +HI+DF I QG Q+ L++++A P GK ++R++GI P + L
Sbjct: 321 LEAIKGEEEVHIIDFDINQGNQYMTLIRSIAELP-GKRPRLRLTGIDDPESVQRSIGGLR 379
Query: 409 ATGDRLREFAGSLSLNLEFEPILIPIRKLRASSFRVDPNEALVVNFMLQLNSLLDDNRLA 468
G RL + A ++ +F+ + + S+ P E L+VNF QL+ + D++
Sbjct: 380 IIGLRLEQLAEDNGVSFKFKAMPSKTSIVSPSTLGCKPGETLIVNFAFQLHHMPDESVTT 439
Query: 469 V---ENALQMAKSLNPIVVTLAEYEANLNRTGFLARFKNALKYYTAVFESLEPNMTTDSD 525
V + L M KSLNP +VT+ E + N N + F RF A +YY+AVFESL+ + +S
Sbjct: 440 VNQRDELLHMVKSLNPKLVTVVEQDVNTNTSPFFPRFIEAYEYYSAVFESLDMTLPRESQ 499
Query: 526 ERFQVERQILGPRIANLLAPEKQGAKR-ERVEDIENWRIFMENSDFEGIPFSHYALSQAE 584
ER VERQ L I N++A E G +R ER E WR M + F P S + +
Sbjct: 500 ERMNVERQCLARDIVNIVACE--GEERIERYEAAGKWRARMMMAGFNPKPMSAKVTNNIQ 557
Query: 585 ILLWNYNYSPLFTLNQSHDNLLTLSWKKVPLLTVSSWR 622
L+ Y + L + L W++ L+ S+WR
Sbjct: 558 NLI-KQQYCNKYKLKEEMGEL-HFCWEEKSLIVASAWR 593
>TAIR|locus:2157477 [details] [associations]
symbol:RGL3 "RGA-like protein 3" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS;TAS] [GO:0009739 "response to gibberellin
stimulus" evidence=IEP;ISS] [GO:0009740 "gibberellic acid mediated
signaling pathway" evidence=RCA;TAS] [GO:0009686 "gibberellin
biosynthetic process" evidence=RCA] [GO:0009694 "jasmonic acid
metabolic process" evidence=RCA] [GO:0009723 "response to ethylene
stimulus" evidence=RCA] [GO:0009737 "response to abscisic acid
stimulus" evidence=RCA] [GO:0009753 "response to jasmonic acid
stimulus" evidence=RCA] [GO:0009845 "seed germination"
evidence=RCA] [GO:0009863 "salicylic acid mediated signaling
pathway" evidence=RCA] [GO:0009867 "jasmonic acid mediated
signaling pathway" evidence=RCA] [GO:0010162 "seed dormancy
process" evidence=RCA] [GO:0010325 "raffinose family
oligosaccharide biosynthetic process" evidence=RCA] [GO:0042538
"hyperosmotic salinity response" evidence=RCA] [GO:0048444 "floral
organ morphogenesis" evidence=RCA] Pfam:PF03514 GO:GO:0007275
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003700
GO:GO:0006351 GO:GO:0040029 EMBL:AL391150 GO:GO:0009740
HOGENOM:HOG000238577 KO:K14494 InterPro:IPR021914
InterPro:IPR005202 Pfam:PF12041 PROSITE:PS50985
ProtClustDB:CLSN2684085 EMBL:AK117226 EMBL:BT005905 IPI:IPI00544591
PIR:T51475 RefSeq:NP_197251.1 UniGene:At.31541
ProteinModelPortal:Q9LF53 SMR:Q9LF53 PaxDb:Q9LF53 PRIDE:Q9LF53
EnsemblPlants:AT5G17490.1 GeneID:831615 KEGG:ath:AT5G17490
GeneFarm:4241 TAIR:At5g17490 eggNOG:NOG300920 InParanoid:Q9LF53
OMA:RRIYRIH PhylomeDB:Q9LF53 Genevestigator:Q9LF53
GermOnline:AT5G17490 Uniprot:Q9LF53
Length = 523
Score = 475 (172.3 bits), Expect = 3.4e-45, P = 3.4e-45
Identities = 133/393 (33%), Positives = 205/393 (52%)
Query: 235 DAVGA-STSTGFAEAELAQPLTKALIDCACLVESEPDKAVKSLVRLRGSVCA-HGNPTER 292
D+V + ST + E L +AL+ CA V+ E +LV+ G + A +
Sbjct: 137 DSVTSESTRSVVLIEETGVRLVQALVACAEAVQLENLSLADALVKRVGLLAASQAGAMGK 196
Query: 293 VAYYFTEALYKRLTQRAEKSITTLEANCEDCILSFKTLNDACPYSKFAYLTANQAILEAT 352
VA YF EAL +R+ R S ++ + E+ IL D+CPY KFA+ TANQAILEA
Sbjct: 197 VATYFAEALARRI-YRIHPSAAAIDPSFEE-ILQMN-FYDSCPYLKFAHFTANQAILEAV 253
Query: 353 ENASHIHIVDFGIVQGIQWSFLLQALANRPTGKPVKVRISGIPAPALGKSPAASLLATGD 412
+ +H++D G+ QG+QW L+QALA RP G P R++G+ P S + G
Sbjct: 254 TTSRVVHVIDLGLNQGMQWPALMQALALRPGGPP-SFRLTGVGNP----SNREGIQELGW 308
Query: 413 RLREFAGSLSLNLEFEPILIP-IRKLRASSFRV-DPNEALVVNFMLQLNSLLDDNRLAVE 470
+L + A ++ + +F + + L F +E LVVN + +L+ +L ++E
Sbjct: 309 KLAQLAQAIGVEFKFNGLTTERLSDLEPDMFETRTESETLVVNSVFELHPVLSQPG-SIE 367
Query: 471 NALQMAKSLNPIVVTLAEYEANLNRTGFLARFKNALKYYTAVFESLEPNMTTDSDERFQV 530
L K++ P +VT+ E EAN N FL RF AL YY+++F+SLE + S +R
Sbjct: 368 KLLATVKAVKPGLVTVVEQEANHNGDVFLDRFNEALHYYSSLFDSLEDGVVIPSQDRVMS 427
Query: 531 ERQILGPRIANLLAPEKQGAKR-ERVEDIENWRIFMENSDFEGIPFSHYALSQAEILLWN 589
E LG +I NL+A E G+ R ER E + WR M ++ F+ + A QA +LL
Sbjct: 428 E-VYLGRQILNLVATE--GSDRIERHETLAQWRKRMGSAGFDPVNLGSDAFKQASLLLAL 484
Query: 590 YNYSPLFTLNQSHDNLLTLSWKKVPLLTVSSWR 622
+ + ++ D L L+W+ PL+ S+W+
Sbjct: 485 SGGGDGYRVEEN-DGSLMLAWQTKPLIAASAWK 516
>TAIR|locus:2044973 [details] [associations]
symbol:SCL21 "AT2G04890" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006487 "protein N-linked glycosylation" evidence=RCA]
Pfam:PF03514 GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0003700 GO:GO:0006351 EMBL:AC006955 EMBL:AC007211
HOGENOM:HOG000238577 InterPro:IPR005202 PROSITE:PS50985
EMBL:AF210732 EMBL:AK175210 EMBL:AK175990 EMBL:AK176099
EMBL:AK221099 EMBL:BT026455 IPI:IPI00534889 PIR:G84462
RefSeq:NP_178566.1 UniGene:At.48419 UniGene:At.71110 IntAct:Q9S7H5
EnsemblPlants:AT2G04890.1 GeneID:815036 KEGG:ath:AT2G04890
GeneFarm:4231 TAIR:At2g04890 eggNOG:NOG292869 InParanoid:Q9S7H5
OMA:HKERINI PhylomeDB:Q9S7H5 ProtClustDB:CLSN2912915
Genevestigator:Q9S7H5 Uniprot:Q9S7H5
Length = 413
Score = 459 (166.6 bits), Expect = 1.7e-43, P = 1.7e-43
Identities = 126/378 (33%), Positives = 188/378 (49%)
Query: 254 LTKALIDCACLV-ESEPDKAVKSLVRLRGSVCAHGNPTERVAYYFTEALYKRLTQRAE-- 310
L L+ CA V E+ A + LRG V G P +R+ Y E L RL
Sbjct: 50 LKLVLVACAKAVSENNLLMARWCMGELRGMVSISGEPIQRLGAYMLEGLVARLAASGSSI 109
Query: 311 -KSITTLEANCEDCILSFKTLNDACPYSKFAYLTANQAILEATENASHIHIVDFGIVQGI 369
KS+ + E + + L++ CPY KF Y++AN AI EA ++ IHI+DF I QG
Sbjct: 110 YKSLQSREPESYEFLSYVYVLHEVCPYFKFGYMSANGAIAEAMKDEERIHIIDFQIGQGS 169
Query: 370 QWSFLLQALANRPTGKPVKVRISGIPAPALGKSPAASLLATGDRLREFAGSLSLNLEFEP 429
QW L+QA A RP G P +RI+G+ + L+ RL + A + F
Sbjct: 170 QWIALIQAFAARPGGAP-NIRITGV-------GDGSVLVTVKKRLEKLAKKFDVPFRFNA 221
Query: 430 ILIPIRKLRASSFRVDPNEALVVNFMLQLNSLLDDNRLAVEN----ALQMAKSLNPIVVT 485
+ P ++ + V EAL VNF L+ L D++ +++EN L+M KSL+P VVT
Sbjct: 222 VSRPSCEVEVENLDVRDGEALGVNFAYMLHHLPDES-VSMENHRDRLLRMVKSLSPKVVT 280
Query: 486 LAEYEANLNRTGFLARFKNALKYYTAVFESLEPNMTTDSDERFQVERQILGPRIANLLAP 545
L E E N N + FL RF L YYTA+FES++ + + ER +E+ + + N++A
Sbjct: 281 LVEQECNTNTSPFLPRFLETLSYYTAMFESIDVMLPRNHKERINIEQHCMARDVVNIIAC 340
Query: 546 EKQGAKR-ERVEDIENWRIFMENSDFEGIPFSHYALSQAEILLWNYNYSPLFTLNQSHDN 604
E GA+R ER E + W+ + FE P S + LL +Y+ + + + D
Sbjct: 341 E--GAERIERHELLGKWKSRFSMAGFEPYPLSSIISATIRALLRDYSNG--YAIEE-RDG 395
Query: 605 LLTLSWKKVPLLTVSSWR 622
L L W L++ +W+
Sbjct: 396 ALYLGWMDRILVSSCAWK 413
>TAIR|locus:2080345 [details] [associations]
symbol:SCR "SCARECROW" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0009630
"gravitropism" evidence=IMP] [GO:0009956 "radial pattern formation"
evidence=IMP] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0042803 "protein homodimerization
activity" evidence=IPI] [GO:0043565 "sequence-specific DNA binding"
evidence=IDA] [GO:0051457 "maintenance of protein location in
nucleus" evidence=IMP] [GO:0008356 "asymmetric cell division"
evidence=IMP] Pfam:PF03514 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
GO:GO:0009630 GO:GO:0008356 GO:GO:0051457 EMBL:AL132957
GO:GO:0010103 GO:GO:0009956 HOGENOM:HOG000238577 InterPro:IPR005202
PROSITE:PS50985 EMBL:U62798 EMBL:AY056315 EMBL:AY080840
EMBL:AY113991 IPI:IPI00524888 PIR:T47581 PIR:T51244
RefSeq:NP_190990.1 UniGene:At.71814 UniGene:At.932 IntAct:Q9M384
STRING:Q9M384 EnsemblPlants:AT3G54220.1 GeneID:824589
KEGG:ath:AT3G54220 GeneFarm:4242 TAIR:At3g54220 eggNOG:NOG311437
InParanoid:Q9M384 OMA:QERENSS PhylomeDB:Q9M384
ProtClustDB:CLSN2915643 Genevestigator:Q9M384 Uniprot:Q9M384
Length = 653
Score = 457 (165.9 bits), Expect = 2.8e-43, P = 2.8e-43
Identities = 135/376 (35%), Positives = 195/376 (51%)
Query: 254 LTKALIDCACLVESEP-DKAVKSLVRLRGSVCAHGNPTERVAYYFTEALYKRLTQRAEKS 312
L L+ CA V ++ ++A K L+ + +G +RVA YF+EA+ RL
Sbjct: 290 LLTLLLQCAEAVSADNLEEANKLLLEISQLSTPYGTSAQRVAAYFSEAMSARLLNSCLGI 349
Query: 313 ITTL------EANCEDCILSFKTLNDACPYSKFAYLTANQAILEATENASHIHIVDFGIV 366
L + + + +F+ N P KF++ TANQAI EA E +HI+D I+
Sbjct: 350 YAALPSRWMPQTHSLKMVSAFQVFNGISPLVKFSHFTANQAIQEAFEKEDSVHIIDLDIM 409
Query: 367 QGIQWSFLLQALANRPTGKPVKVRISGIPAPALGKSPAASLLATGDRLREFAGSLSLNLE 426
QG+QW L LA+RP G P VR++G LG S A L ATG RL +FA L L E
Sbjct: 410 QGLQWPGLFHILASRPGGPP-HVRLTG-----LGTSMEA-LQATGKRLSDFADKLGLPFE 462
Query: 427 FEPILIPIRKLRASSFRVDPNEALVVNFMLQLNSLLDDNRLAVENALQMAKSLNPIVVTL 486
F P+ + L V EA+ V++ LQ +SL D + + L + + L P VVT+
Sbjct: 463 FCPLAEKVGNLDTERLNVRKREAVAVHW-LQ-HSLYDVTG-SDAHTLWLLQRLAPKVVTV 519
Query: 487 AEYEANLNRTG-FLARFKNALKYYTAVFESLEPNMTTDSDERFQVERQILGPRIANLLAP 545
E + L+ G FL RF A+ YY+A+F+SL + +S+ER VE+Q+L I N+LA
Sbjct: 520 VEQD--LSHAGSFLGRFVEAIHYYSALFDSLGASYGEESEERHVVEQQLLSKEIRNVLAV 577
Query: 546 EKQGAKRERVEDIENWRIFMENSDFEGIPFSHYALSQAEILLWNYNYSPLFTLNQSHDNL 605
G R E+WR M+ F+GI + A +QA +LL + S +TL + L
Sbjct: 578 G--GPSRSGEVKFESWREKMQQCGFKGISLAGNAATQATLLLGMFP-SDGYTLVDDNGTL 634
Query: 606 LTLSWKKVPLLTVSSW 621
L WK + LLT S+W
Sbjct: 635 -KLGWKDLSLLTASAW 649
>TAIR|locus:2132482 [details] [associations]
symbol:AT4G08250 "AT4G08250" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] Pfam:PF03514 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0003700 GO:GO:0006351
InterPro:IPR005202 PROSITE:PS50985 EMBL:AL080252 EMBL:AL161510
EMBL:BT011797 IPI:IPI00529829 PIR:T10552 RefSeq:NP_192565.1
UniGene:At.50325 DNASU:826375 EnsemblPlants:AT4G08250.1
GeneID:826375 KEGG:ath:AT4G08250 GeneFarm:4263 TAIR:At4g08250
eggNOG:NOG320032 HOGENOM:HOG000239937 InParanoid:Q9SUF5 OMA:SLEAGFP
PhylomeDB:Q9SUF5 ProtClustDB:CLSN2685964 Genevestigator:Q9SUF5
Uniprot:Q9SUF5
Length = 483
Score = 439 (159.6 bits), Expect = 2.2e-41, P = 2.2e-41
Identities = 123/356 (34%), Positives = 185/356 (51%)
Query: 276 LVRLRGSVCAHGNPT--ERVAYYFTEALYKRLTQRAEKSITTLEANCEDC------ILSF 327
L RL+ V + G+ T ER+A +FT L K L +R S+ + + +D I +F
Sbjct: 129 LARLKDLV-SPGDRTNMERLAAHFTNGLSK-LLER--DSVLCPQQHRDDVYDQADVISAF 184
Query: 328 KTLNDACPYSKFAYLTANQAILEATENASHIHIVDFGIVQGIQWSFLLQALANRPTGKPV 387
+ L + PY F YLTA QAILEA + IHIVD+ I +G+QW+ L+QAL +R TG
Sbjct: 185 ELLQNMSPYVNFGYLTATQAILEAVKYERRIHIVDYDINEGVQWASLMQALVSRNTGPSA 244
Query: 388 K-VRISGIPAPALGKSPAASLLATGDRLREFAGSLSLNLEFEPILIPIRKLRASSFRVDP 446
+ +RI+ + GK A++ TG RL FA S+ ++ + SS ++
Sbjct: 245 QHLRITALSRATNGKKSVAAVQETGRRLTAFADSIGQPFSYQHCKLDTNAFSTSSLKLVR 304
Query: 447 NEALVVNFMLQLNSLLDDNRLAVENALQMAKSLNPIVVTLAEYEANL-NRTGFLARFKNA 505
EA+V+N ML L +V + L AK+LNP +VTL E L GFL RF +
Sbjct: 305 GEAVVINCMLHLPRFSHQTPSSVISFLSEAKTLNPKLVTLVHEEVGLMGNQGFLYRFMDL 364
Query: 506 LKYYTAVFESLEPNMTTDSDERFQVERQILGPRIANLLAPEKQGAKRERVEDIENWRIFM 565
L ++A+F+SLE ++ + R VER +GP +AN L + A VE +W ++
Sbjct: 365 LHQFSAIFDSLEAGLSIANPARGFVERVFIGPWVANWLT--RITANDAEVESFASWPQWL 422
Query: 566 ENSDFEGIPFSHYALSQAEILLWNYNYSPLFTLNQSHDNLLTLSWKKVPLLTVSSW 621
E + F+ + S QA++LL +N F + + N L L WK L++ S W
Sbjct: 423 ETNGFKPLEVSFTNRCQAKLLLSLFNDG--FRVEELGQNGLVLGWKSRRLVSASFW 476
>TAIR|locus:2201557 [details] [associations]
symbol:RGL1 "RGA-like 1" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA;TAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS;TAS] [GO:0009740 "gibberellic acid mediated signaling
pathway" evidence=RCA;TAS] [GO:0009938 "negative regulation of
gibberellic acid mediated signaling pathway" evidence=IMP]
[GO:0009651 "response to salt stress" evidence=IGI] [GO:0009723
"response to ethylene stimulus" evidence=IGI;RCA] [GO:0009737
"response to abscisic acid stimulus" evidence=IGI;RCA] [GO:0042538
"hyperosmotic salinity response" evidence=IGI;RCA] [GO:0009739
"response to gibberellin stimulus" evidence=IEP] [GO:2000377
"regulation of reactive oxygen species metabolic process"
evidence=IGI] [GO:0009863 "salicylic acid mediated signaling
pathway" evidence=IGI;RCA] [GO:0009867 "jasmonic acid mediated
signaling pathway" evidence=IGI;RCA] [GO:0009845 "seed germination"
evidence=RCA] [GO:0010162 "seed dormancy process" evidence=RCA]
[GO:0010325 "raffinose family oligosaccharide biosynthetic process"
evidence=RCA] [GO:0048444 "floral organ morphogenesis"
evidence=RCA] Pfam:PF03514 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0009737 GO:GO:0005634 GO:GO:0030154 GO:GO:0009723
GO:GO:0003700 GO:GO:0006351 GO:GO:0009908 GO:GO:0042538
GO:GO:2000377 EMBL:AC020665 GO:GO:0040029 GO:GO:0009867
GO:GO:0009863 GO:GO:0009740 HOGENOM:HOG000238577 KO:K14494
GO:GO:0009938 InterPro:IPR021914 InterPro:IPR005202 Pfam:PF12041
PROSITE:PS50985 EMBL:AJ224957 EMBL:AY048749 EMBL:AY070035
EMBL:AY096506 IPI:IPI00518407 PIR:G96688 RefSeq:NP_176809.1
UniGene:At.26400 UniGene:At.75607 ProteinModelPortal:Q9C8Y3
SMR:Q9C8Y3 IntAct:Q9C8Y3 STRING:Q9C8Y3 EnsemblPlants:AT1G66350.1
GeneID:842953 KEGG:ath:AT1G66350 GeneFarm:4239 TAIR:At1g66350
eggNOG:NOG314007 InParanoid:Q9C8Y3 OMA:TSAWRIN PhylomeDB:Q9C8Y3
ProtClustDB:CLSN2914366 Genevestigator:Q9C8Y3 GermOnline:AT1G66350
Uniprot:Q9C8Y3
Length = 511
Score = 439 (159.6 bits), Expect = 2.2e-41, P = 2.2e-41
Identities = 122/372 (32%), Positives = 192/372 (51%)
Query: 254 LTKALIDCACLVESEPDKAVKSLVRLRGSVCA-HGNPTERVAYYFTEALYKRLTQRAEKS 312
L AL+ CA V+ K +LV+ G + + +VA YF E L +R+ + +
Sbjct: 152 LVHALLACAEAVQQNNLKLADALVKHVGLLASSQAGAMRKVATYFAEGLARRIYRIYPRD 211
Query: 313 ITTLEANCEDCILSFKTLNDACPYSKFAYLTANQAILEATENASHIHIVDFGIVQGIQWS 372
L + + + F ++CPY KFA+ TANQAILE A +H++D G+ G+QW
Sbjct: 212 DVALSSFSDTLQIHFY---ESCPYLKFAHFTANQAILEVFATAEKVHVIDLGLNHGLQWP 268
Query: 373 FLLQALANRPTGKPVKVRISGIPAPALGKSPAASLLATGDRLREFAGSLSLNLEFEPILI 432
L+QALA RP G P R++GI G S + G +L + A ++ +N EF+ I +
Sbjct: 269 ALIQALALRPNGPP-DFRLTGI-----GYS-LTDIQEVGWKLGQLASTIGVNFEFKSIAL 321
Query: 433 P-IRKLRASSFRVDPN-EALVVNFMLQLNSLLDDNRLAVENALQMAKSLNPIVVTLAEYE 490
+ L+ + P E++ VN + +L+ LL +++ L KS+ P ++T+ E E
Sbjct: 322 NNLSDLKPEMLDIRPGLESVAVNSVFELHRLLAHPG-SIDKFLSTIKSIRPDIMTVVEQE 380
Query: 491 ANLNRTGFLARFKNALKYYTAVFESLEPNMTTDSDERFQVERQILGPRIANLLAPEKQGA 550
AN N T FL RF +L YY+++F+SLE S +R E LG +I NL+A E +
Sbjct: 381 ANHNGTVFLDRFTESLHYYSSLFDSLEG---PPSQDRVMSEL-FLGRQILNLVACEGED- 435
Query: 551 KRERVEDIENWRIFMENSDFEGIPFSHYALSQAEILLWNYNYSPLFTLNQSHDNLLTLSW 610
+ ER E + WR F+ + A QA +LL Y + + + ++ LL L W
Sbjct: 436 RVERHETLNQWRNRFGLGGFKPVSIGSNAYKQASMLLALYAGADGYNVEENEGCLL-LGW 494
Query: 611 KKVPLLTVSSWR 622
+ PL+ S+WR
Sbjct: 495 QTRPLIATSAWR 506
>TAIR|locus:2015243 [details] [associations]
symbol:AT1G63100 "AT1G63100" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0000226 "microtubule cytoskeleton organization"
evidence=RCA] [GO:0000911 "cytokinesis by cell plate formation"
evidence=RCA] [GO:0048451 "petal formation" evidence=RCA]
[GO:0048453 "sepal formation" evidence=RCA] Pfam:PF03514
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003700
GO:GO:0006351 EMBL:AC010795 InterPro:IPR005202 PROSITE:PS50985
IPI:IPI00520577 PIR:D96656 RefSeq:NP_176498.1 UniGene:At.66082
ProteinModelPortal:Q9CAN3 SMR:Q9CAN3 PRIDE:Q9CAN3
EnsemblPlants:AT1G63100.1 GeneID:842613 KEGG:ath:AT1G63100
GeneFarm:4261 TAIR:At1g63100 eggNOG:NOG286854 HOGENOM:HOG000241666
InParanoid:Q9CAN3 OMA:RTKCENE PhylomeDB:Q9CAN3
ProtClustDB:CLSN2682380 Genevestigator:Q9CAN3 Uniprot:Q9CAN3
Length = 658
Score = 440 (159.9 bits), Expect = 3.2e-41, P = 3.2e-41
Identities = 125/389 (32%), Positives = 192/389 (49%)
Query: 254 LTKALIDCACLVESEPDKAVKSLVRLRGSVCA-HGN-PTERVAYYFTEALYKRLTQRAEK 311
L L C + S A+ + G + + G P R+ Y+ EAL R+ +
Sbjct: 274 LVNLLTGCLDAIRSRNIAAINHFIARTGDLASPRGRTPMTRLIAYYIEALALRVARMWPH 333
Query: 312 SI-----TTLEANCED-CILSFKTLNDACPYSKFAYLTANQAILEATENASHIHIVDFGI 365
+ ED + + LN P KF + TAN+ +L A E +HI+DF I
Sbjct: 334 IFHIAPPREFDRTVEDESGNALRFLNQVTPIPKFIHFTANEMLLRAFEGKERVHIIDFDI 393
Query: 366 VQGIQWSFLLQALANRPTGKPVKVRISGIPAPALGKSPAASLLATGDRLREFAGSLSLNL 425
QG+QW Q+LA+R P VRI+GI G+S L TGDRL FA +++L
Sbjct: 394 KQGLQWPSFFQSLASR-INPPHHVRITGI-----GESKL-ELNETGDRLHGFAEAMNLQF 446
Query: 426 EFEPILIPIRKLRASSFRVDPNEALVVNFMLQLN-SLLDDNRLAVENALQMAKSLNPIVV 484
EF P++ + +R V E++ VN ++Q++ +L D A+ + L + +S NPI +
Sbjct: 447 EFHPVVDRLEDVRLWMLHVKEGESVAVNCVMQMHKTLYDGTGAAIRDFLGLIRSTNPIAL 506
Query: 485 TLAEYEANLNRTGFLARFKNALKYYTAVFESLEPNMTTDSDERFQVERQILGPRIANLLA 544
LAE EA N R N+LKYY+A+F+++ N+ TDS R +VE + G I N++A
Sbjct: 507 VLAEQEAEHNSEQLETRVCNSLKYYSAMFDAIHTNLATDSLMRVKVEEMLFGREIRNIVA 566
Query: 545 PEKQGAKR-ERVEDIENWRIFMENSDFEGIPFSHYALSQAEILLWNY--NYSPLFTLNQS 601
E G+ R ER +WR +E F + S + Q+++LL Y + F + +S
Sbjct: 567 CE--GSHRQERHVGFRHWRRMLEQLGFRSLGVSEREVLQSKMLLRMYGSDNEGFFNVERS 624
Query: 602 -HDNL--------LTLSWKKVPLLTVSSW 621
DN +TL W + PL T+S+W
Sbjct: 625 DEDNGGEGGRGGGVTLRWSEQPLYTISAW 653
>TAIR|locus:2006747 [details] [associations]
symbol:GAI "GIBBERELLIC ACID INSENSITIVE" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;ISS;IDA;TAS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS;TAS]
[GO:0009740 "gibberellic acid mediated signaling pathway"
evidence=RCA;TAS] [GO:0009938 "negative regulation of gibberellic
acid mediated signaling pathway" evidence=IMP;TAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0010233 "phloem transport"
evidence=IMP] [GO:0009651 "response to salt stress" evidence=IGI]
[GO:0009723 "response to ethylene stimulus" evidence=IGI;RCA]
[GO:0009737 "response to abscisic acid stimulus" evidence=IGI;RCA]
[GO:0042538 "hyperosmotic salinity response" evidence=IGI;RCA]
[GO:0010029 "regulation of seed germination" evidence=IGI]
[GO:2000033 "regulation of seed dormancy process" evidence=IGI]
[GO:0009739 "response to gibberellin stimulus" evidence=IEP]
[GO:0010187 "negative regulation of seed germination" evidence=IGI]
[GO:0010218 "response to far red light" evidence=IEP] [GO:2000377
"regulation of reactive oxygen species metabolic process"
evidence=IGI] [GO:0009863 "salicylic acid mediated signaling
pathway" evidence=IGI;RCA] [GO:0009867 "jasmonic acid mediated
signaling pathway" evidence=IGI;RCA] [GO:0009845 "seed germination"
evidence=RCA] [GO:0010162 "seed dormancy process" evidence=RCA]
[GO:0010325 "raffinose family oligosaccharide biosynthetic process"
evidence=RCA] [GO:0048444 "floral organ morphogenesis"
evidence=RCA] [GO:0006808 "regulation of nitrogen utilization"
evidence=IMP] Pfam:PF03514 GO:GO:0007275 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0009737 GO:GO:0005634 GO:GO:0009723
GO:GO:0003700 GO:GO:0006351 GO:GO:0010218 GO:GO:0010187
GO:GO:0006808 GO:GO:0042538 GO:GO:2000377 EMBL:AC006917
GO:GO:0010233 GO:GO:0040029 GO:GO:0009867 GO:GO:0009863
GO:GO:0009740 EMBL:Y11337 EMBL:Y15193 EMBL:AY058194 EMBL:AY142002
IPI:IPI00535232 PIR:H86282 RefSeq:NP_172945.1 UniGene:At.15032
UniGene:At.75604 PDB:2ZSH PDB:2ZSI PDBsum:2ZSH PDBsum:2ZSI
ProteinModelPortal:Q9LQT8 SMR:Q9LQT8 DIP:DIP-32985N IntAct:Q9LQT8
STRING:Q9LQT8 EnsemblPlants:AT1G14920.1 GeneID:838057
KEGG:ath:AT1G14920 GeneFarm:4235 TAIR:At1g14920 eggNOG:NOG243696
HOGENOM:HOG000238577 InParanoid:Q9LQT8 KO:K14494 OMA:RRVYRFR
PhylomeDB:Q9LQT8 ProtClustDB:CLSN2682993 EvolutionaryTrace:Q9LQT8
Genevestigator:Q9LQT8 GermOnline:AT1G14920 GO:GO:0009938
GO:GO:2000033 InterPro:IPR021914 InterPro:IPR005202 Pfam:PF12041
PROSITE:PS50985 Uniprot:Q9LQT8
Length = 533
Score = 435 (158.2 bits), Expect = 5.9e-41, P = 5.9e-41
Identities = 121/374 (32%), Positives = 190/374 (50%)
Query: 254 LTKALIDCACLVESEPDKAVKSLVRLRGSVCAHG-NPTERVAYYFTEALYKRLTQRAEKS 312
L AL+ CA V+ E ++LV+ G + +VA YF EAL +R+ R S
Sbjct: 169 LVHALLACAEAVQKENLTVAEALVKQIGFLAVSQIGAMRKVATYFAEALARRI-YRLSPS 227
Query: 313 ITTLEANCEDCILSFKTLNDACPYSKFAYLTANQAILEATENASHIHIVDFGIVQGIQWS 372
+ ++ + D + + CPY KFA+ TANQAILEA + +H++DF + QG+QW
Sbjct: 228 QSPIDHSLSDTLQMH--FYETCPYLKFAHFTANQAILEAFQGKKRVHVIDFSMSQGLQWP 285
Query: 373 FLLQALANRPTGKPVKVRISGIPAPALGKSPAASLLATGDRLREFAGSLSLNLEFEPILI 432
L+QALA RP G PV R++GI PA L G +L A ++ + E+ +
Sbjct: 286 ALMQALALRPGGPPV-FRLTGIGPPAPDNFDY--LHEVGCKLAHLAEAIHVEFEYRGFVA 342
Query: 433 -PIRKLRASSFRVDPNE--ALVVNFMLQLNSLLDDNRLAVENALQMAKSLNPIVVTLAEY 489
+ L AS + P+E ++ VN + +L+ LL A++ L + + P + T+ E
Sbjct: 343 NTLADLDASMLELRPSEIESVAVNSVFELHKLLGRPG-AIDKVLGVVNQIKPEIFTVVEQ 401
Query: 490 EANLNRTGFLARFKNALKYYTAVFESLEPNMTTDSDERFQVERQILGPRIANLLAPEKQG 549
E+N N FL RF +L YY+ +F+SLE + + D+ + LG +I N++A + G
Sbjct: 402 ESNHNSPIFLDRFTESLHYYSTLFDSLE-GVPSGQDK--VMSEVYLGKQICNVVACD--G 456
Query: 550 AKR-ERVEDIENWRIFMENSDFEGIPFSHYALSQAEILLWNYNYSPLFTLNQSHDNLLTL 608
R ER E + WR ++ F A QA +LL +N + + +S D L L
Sbjct: 457 PDRVERHETLSQWRNRFGSAGFAAAHIGSNAFKQASMLLALFNGGEGYRVEES-DGCLML 515
Query: 609 SWKKVPLLTVSSWR 622
W PL+ S+W+
Sbjct: 516 GWHTRPLIATSAWK 529
>TAIR|locus:2005516 [details] [associations]
symbol:RGA1 "REPRESSOR OF GA1-3 1" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA;TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS;IDA;TAS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=TAS] [GO:0009740
"gibberellic acid mediated signaling pathway" evidence=RCA;TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009651 "response
to salt stress" evidence=IGI;RCA] [GO:0009723 "response to ethylene
stimulus" evidence=IGI;RCA] [GO:0009737 "response to abscisic acid
stimulus" evidence=IGI;RCA] [GO:0042538 "hyperosmotic salinity
response" evidence=IGI;RCA] [GO:0010029 "regulation of seed
germination" evidence=IGI] [GO:2000033 "regulation of seed dormancy
process" evidence=IGI] [GO:0010187 "negative regulation of seed
germination" evidence=IGI] [GO:0010218 "response to far red light"
evidence=IEP] [GO:2000377 "regulation of reactive oxygen species
metabolic process" evidence=IGI] [GO:0009867 "jasmonic acid
mediated signaling pathway" evidence=IGI;RCA] [GO:0042176
"regulation of protein catabolic process" evidence=IMP] [GO:0006096
"glycolysis" evidence=RCA] [GO:0006833 "water transport"
evidence=RCA] [GO:0006972 "hyperosmotic response" evidence=RCA]
[GO:0007030 "Golgi organization" evidence=RCA] [GO:0009266
"response to temperature stimulus" evidence=RCA] [GO:0009733
"response to auxin stimulus" evidence=RCA] [GO:0009845 "seed
germination" evidence=RCA] [GO:0009863 "salicylic acid mediated
signaling pathway" evidence=RCA] [GO:0010162 "seed dormancy
process" evidence=RCA] [GO:0010325 "raffinose family
oligosaccharide biosynthetic process" evidence=RCA] [GO:0032880
"regulation of protein localization" evidence=RCA] [GO:0042744
"hydrogen peroxide catabolic process" evidence=RCA] [GO:0046686
"response to cadmium ion" evidence=RCA] [GO:0048444 "floral organ
morphogenesis" evidence=RCA] [GO:0009938 "negative regulation of
gibberellic acid mediated signaling pathway" evidence=IGI]
Pfam:PF03514 GO:GO:0007275 GO:GO:0009737 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0009723 GO:GO:0003700
GO:GO:0006351 GO:GO:0010218 GO:GO:0010187 GO:GO:0042176
GO:GO:0042538 EMBL:AC005560 GO:GO:2000377 GO:GO:0040029
GO:GO:0009867 GO:GO:0009740 eggNOG:NOG243696 HOGENOM:HOG000238577
KO:K14494 ProtClustDB:CLSN2682993 GO:GO:0009938 GO:GO:2000033
InterPro:IPR021914 InterPro:IPR005202 Pfam:PF12041 PROSITE:PS50985
EMBL:Y11336 EMBL:Y15194 EMBL:AY052239 EMBL:AY054160 EMBL:BT010467
IPI:IPI00523272 PIR:D84426 RefSeq:NP_178266.1 UniGene:At.24012
ProteinModelPortal:Q9SLH3 SMR:Q9SLH3 IntAct:Q9SLH3 STRING:Q9SLH3
PRIDE:Q9SLH3 EnsemblPlants:AT2G01570.1 GeneID:814686
KEGG:ath:AT2G01570 GeneFarm:4238 TAIR:At2g01570 InParanoid:Q9SLH3
OMA:VHALMAC PhylomeDB:Q9SLH3 Genevestigator:Q9SLH3
GermOnline:AT2G01570 Uniprot:Q9SLH3
Length = 587
Score = 434 (157.8 bits), Expect = 7.5e-41, P = 7.5e-41
Identities = 129/394 (32%), Positives = 197/394 (50%)
Query: 236 AVGAST-STGFAEA-ELAQPLTKALIDCACLVESEPDKAVKSLVRLRGSVC-AHGNPTER 292
A G ST S ++ E L AL+ CA ++ ++LV+ G + + +
Sbjct: 201 AAGESTRSVILVDSQENGVRLVHALMACAEAIQQNNLTLAEALVKQIGCLAVSQAGAMRK 260
Query: 293 VAYYFTEALYKRLTQRAEKSITTLEANCEDCILSFKTLNDACPYSKFAYLTANQAILEAT 352
VA YF EAL +R+ R ++ +C L + CPY KFA+ TANQAILEA
Sbjct: 261 VATYFAEALARRI-YRLSPPQNQID-HCLSDTLQMH-FYETCPYLKFAHFTANQAILEAF 317
Query: 353 ENASHIHIVDFGIVQGIQWSFLLQALANRPTGKPVKVRISGIPAPALGKSPAASLLATGD 412
E +H++DF + QG+QW L+QALA R G P R++GI PA S L G
Sbjct: 318 EGKKRVHVIDFSMNQGLQWPALMQALALREGGPPT-FRLTGIGPPAPDNSD--HLHEVGC 374
Query: 413 RLREFAGSLSLNLEFEPILI-PIRKLRASSFRVDPN--EALVVNFMLQLNSLLDDNRLAV 469
+L + A ++ + E+ + + L AS + P+ EA+ VN + +L+ LL +
Sbjct: 375 KLAQLAEAIHVEFEYRGFVANSLADLDASMLELRPSDTEAVAVNSVFELHKLLGRPG-GI 433
Query: 470 ENALQMAKSLNPIVVTLAEYEANLNRTGFLARFKNALKYYTAVFESLEPNMTTDSDERFQ 529
E L + K + P++ T+ E E+N N FL RF +L YY+ +F+SLE +S ++
Sbjct: 434 EKVLGVVKQIKPVIFTVVEQESNHNGPVFLDRFTESLHYYSTLFDSLEG--VPNSQDKVM 491
Query: 530 VERQILGPRIANLLAPEKQGAKR-ERVEDIENWRIFMENSDFEGIPFSHYALSQAEILLW 588
E LG +I NL+A E G R ER E + W +S A QA +LL
Sbjct: 492 SE-VYLGKQICNLVACE--GPDRVERHETLSQWGNRFGSSGLAPAHLGSNAFKQASMLLS 548
Query: 589 NYNYSPLFTLNQSHDNLLTLSWKKVPLLTVSSWR 622
+N + + +S+ L+ L W PL+T S+W+
Sbjct: 549 VFNSGQGYRVEESNGCLM-LGWHTRPLITTSAWK 581
>TAIR|locus:2025022 [details] [associations]
symbol:SCL14 "SCARECROW-like 14" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0005829 "cytosol" evidence=IDA]
[GO:0009410 "response to xenobiotic stimulus" evidence=IMP]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IMP] [GO:0000956 "nuclear-transcribed mRNA catabolic
process" evidence=RCA] [GO:0006486 "protein glycosylation"
evidence=RCA] Pfam:PF03514 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005829 GO:GO:0005634 GO:GO:0045893 GO:GO:0003700
GO:GO:0006351 GO:GO:0009410 EMBL:AC022464 InterPro:IPR005202
PROSITE:PS50985 HOGENOM:HOG000238576 EMBL:AF036309 IPI:IPI00525012
PIR:T51232 RefSeq:NP_172233.1 UniGene:At.21921 STRING:Q9XE58
PaxDb:Q9XE58 PRIDE:Q9XE58 EnsemblPlants:AT1G07530.1 GeneID:837267
KEGG:ath:AT1G07530 GeneFarm:4250 TAIR:At1g07530 eggNOG:NOG319005
OMA:HEDFVVD PhylomeDB:Q9XE58 Genevestigator:Q9XE58 Uniprot:Q9XE58
Length = 769
Score = 433 (157.5 bits), Expect = 5.3e-40, P = 5.3e-40
Identities = 116/394 (29%), Positives = 193/394 (48%)
Query: 240 STSTGFA---EAELAQPLTKALIDCACLVESEPDKAVKSLVR-LRGSVCAHGNPTERVAY 295
STST + + E A L L+ CA V + + ++R +R GN +ER+A+
Sbjct: 377 STSTSHSNDSKKETAD-LRTLLVLCAQAVSVDDRRTANEMLRQIREHSSPLGNGSERLAH 435
Query: 296 YFTEALYKRLTQRAEKSITTLEA---NCEDCILSFKTLNDACPYSKFAYLTANQAILEAT 352
YF +L RL + T L + + D + +++T CP+ K A + AN +++ T
Sbjct: 436 YFANSLEARLAGTGTQIYTALSSKKTSAADMLKAYQTYMSVCPFKKAAIIFANHSMMRFT 495
Query: 353 ENASHIHIVDFGIVQGIQWSFLLQALA-NRPTGKPVKVRISGIPAPALGKSPAASLLATG 411
NA+ IHI+DFGI G QW L+ L+ +RP G P K+RI+GI P G PA + TG
Sbjct: 496 ANANTIHIIDFGISYGFQWPALIHRLSLSRPGGSP-KLRITGIELPQRGFRPAEGVQETG 554
Query: 412 DRLREFAGSLSLNLEFEPILIPIRKLRASSFRVDPNEALVVNFMLQLNSLLDDNRLAV-- 469
RL + ++ E+ I ++ ++ E +VVN + + +LLD+ L
Sbjct: 555 HRLARYCQRHNVPFEYNAIAQKWETIQVEDLKLRQGEYVVVNSLFRFRNLLDETVLVNSP 614
Query: 470 -ENALQMAKSLNPIVVTLAEYEANLNRTGFLARFKNALKYYTAVFESLEPNMTTDSDERF 528
+ L++ + +NP V A N N F+ RF+ AL +Y+AVF+ + + + + R
Sbjct: 615 RDAVLKLIRKINPNVFIPAILSGNYNAPFFVTRFREALFHYSAVFDMCDSKLAREDEMRL 674
Query: 529 QVERQILGPRIANLLAPEKQGAKR-ERVEDIENWRIFMENSDFEGIPFSHYALSQAEILL 587
E++ G I N++A E G +R ER E + W+ + + F +P + ++ +
Sbjct: 675 MYEKEFYGREIVNVVACE--GTERVERPETYKQWQARLIRAGFRQLPLEKELMQNLKLKI 732
Query: 588 WNYNYSPLFTLNQSHDNLLTLSWKKVPLLTVSSW 621
N Y F ++Q+ N L WK + S W
Sbjct: 733 EN-GYDKNFDVDQN-GNWLLQGWKGRIVYASSLW 764
>TAIR|locus:2165685 [details] [associations]
symbol:AT5G41920 "AT5G41920" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] Pfam:PF03514 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0003700 GO:GO:0006351 EMBL:AB017067
HOGENOM:HOG000238577 InterPro:IPR005202 PROSITE:PS50985
EMBL:BT029760 IPI:IPI00535918 RefSeq:NP_199007.1 UniGene:At.67848
UniGene:At.72727 IntAct:Q9FHZ1 DNASU:834197
EnsemblPlants:AT5G41920.1 GeneID:834197 KEGG:ath:AT5G41920
GeneFarm:4246 TAIR:At5g41920 eggNOG:NOG72098 InParanoid:Q9FHZ1
OMA:PWKGYTL PhylomeDB:Q9FHZ1 ProtClustDB:CLSN2686419
Genevestigator:Q9FHZ1 Uniprot:Q9FHZ1
Length = 405
Score = 423 (154.0 bits), Expect = 1.1e-39, P = 1.1e-39
Identities = 124/382 (32%), Positives = 197/382 (51%)
Query: 254 LTKALIDCACLVESEPDKAVKSLVRLRGSVCA-HGNPTERVAYYFTEALYKRLTQR---- 308
L L+ CA V ++ + +L+ +C+ G+ ERV YF +AL R+
Sbjct: 40 LLSLLLQCAEYVATDHLREASTLLSEISEICSPFGSSPERVVAYFAQALQTRVISSYLSG 99
Query: 309 -----AEKSITTLEANCEDCILSFKTLNDACPYSKFAYLTANQAILEATENASHIHIVDF 363
+EK +T +++ + + +T N P KF++ TANQAI +A + +HI+D
Sbjct: 100 ACSPLSEKPLTVVQS--QKIFSALQTYNSVSPLIKFSHFTANQAIFQALDGEDSVHIIDL 157
Query: 364 GIVQGIQWSFLLQALANRPTGKPVKVRISGIPAPALGKSPAASLLA-TGDRLREFAGSLS 422
++QG+QW L LA+RP K +RI+G G S + LLA TG RL +FA SL+
Sbjct: 158 DVMQGLQWPALFHILASRPR-KLRSIRITGF-----GSS--SDLLASTGRRLADFASSLN 209
Query: 423 LNLEFEPILIPIRKL-RASSFRVDPNEALVVNFMLQLNSLLDDNRLAVENALQMAKSLNP 481
L EF PI I L S EA+VV++M + N L L++ + L P
Sbjct: 210 LPFEFHPIEGIIGNLIDPSQLATRQGEAVVVHWMQHRLYDVTGNNL---ETLEILRRLKP 266
Query: 482 IVVTLAEYEANLNRTG-FLARFKNALKYYTAVFESLEPNMTTDSDERFQVERQILGPRIA 540
++T+ E E + + G FL RF AL YY+A+F++L + +S ERF VE+ +LG I
Sbjct: 267 NLITVVEQELSYDDGGSFLGRFVEALHYYSALFDALGDGLGEESGERFTVEQIVLGTEIR 326
Query: 541 NLLAPEKQGAKRERVEDIENWRIFMENSDFEGIPFSHYALSQAEILLWNYNYSPLFTLNQ 600
N++A G +R+R++ W+ + F + +QA +LL ++ +TL +
Sbjct: 327 NIVA--HGGGRRKRMK----WKEELSRVGFRPVSLRGNPATQAGLLLGMLPWNG-YTLVE 379
Query: 601 SHDNLLTLSWKKVPLLTVSSWR 622
+ L L WK + LLT S+W+
Sbjct: 380 ENGTL-RLGWKDLSLLTASAWK 400
>TAIR|locus:2075155 [details] [associations]
symbol:AT3G46600 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0016671 "oxidoreductase
activity, acting on a sulfur group of donors, disulfide as
acceptor" evidence=IEA] [GO:0019538 "protein metabolic process"
evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0010200 "response to chitin" evidence=IEP;RCA] [GO:0002679
"respiratory burst involved in defense response" evidence=RCA]
[GO:0035556 "intracellular signal transduction" evidence=RCA]
Pfam:PF03514 GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0003700 GO:GO:0006351 GO:GO:0010200 EMBL:AL133314
InterPro:IPR005202 PROSITE:PS50985 HOGENOM:HOG000238576
ProtClustDB:CLSN2685117 EMBL:AK226419 EMBL:AY087418 IPI:IPI00537144
PIR:T45597 RefSeq:NP_190244.1 UniGene:At.595 STRING:Q9SNB8
EnsemblPlants:AT3G46600.1 GeneID:823813 KEGG:ath:AT3G46600
GeneFarm:4254 TAIR:At3g46600 eggNOG:NOG304481 InParanoid:Q9SNB8
OMA:FNESESQ PhylomeDB:Q9SNB8 Genevestigator:Q9SNB8 Uniprot:Q9SNB8
Length = 583
Score = 409 (149.0 bits), Expect = 3.4e-38, P = 3.4e-38
Identities = 111/392 (28%), Positives = 190/392 (48%)
Query: 241 TSTGFAEAELAQP--LTKALIDCACLVES-EPDKAVKSLVRLRGSVCAHGNPTERVAYYF 297
+S + + + QP + L+ CA V S + +A + L +R HG+ T+R+ Y+F
Sbjct: 194 SSNRYKQQKSDQPVDMRNLLMQCAQAVASFDQRRAFEKLKEIREHSSRHGDATQRLGYHF 253
Query: 298 TEALYKRLT--QRAEKSITTLEANCEDCILSFKTLNDACPYSKFAYLTANQAILEATENA 355
EAL R+T S T+ + D + ++K ACP Y TAN+ I E A
Sbjct: 254 AEALEARITGTMTTPISATSSRTSMVDILKAYKGFVQACPTLIMCYFTANRTINELASKA 313
Query: 356 SHIHIVDFGIVQGIQWSFLLQALANRPTGKPVKVRISGIPAPALGKSPAASLLATGDRLR 415
+ +HI+DFGI+ G QW L+QAL+ R G P+ +R++GI P G P+ + TG RL+
Sbjct: 314 TTLHIIDFGILYGFQWPCLIQALSKRDIGPPL-LRVTGIELPQSGFRPSERVEETGRRLK 372
Query: 416 EFAGSLSLNLEFEPILIPIRKLRASSFRVDPNEALVVNFMLQLNSLLDDN---RLAVENA 472
F ++ E+ I + ++ E VVN +L+L D+ + A
Sbjct: 373 RFCDKFNVPFEYSFIAKNWENITLDDLVINSGETTVVNCILRLQYTPDETVSLNSPRDTA 432
Query: 473 LQMAKSLNPIVVTLAEYEANLNRTGFLARFKNALKYYTAVFESLEPNMTTDSDERFQVER 532
L++ + +NP + AE N FL RF+ AL + +++F+ E ++ D + R VER
Sbjct: 433 LKLFRDINPDLFVFAEINGTYNSPFFLTRFREALFHCSSLFDMYETTLSEDDNCRTLVER 492
Query: 533 QILGPRIANLLAPEKQGAKR-ERVEDIENWRIFMENSDFEGIPFSHYALSQAEILLWNYN 591
+++ +++A E G++R R E + W++ + + F S + + ++
Sbjct: 493 ELIIRDAMSVIACE--GSERFARPETYKQWQVRILRAGFRPAKLSKQIVKDGKEIV-KER 549
Query: 592 YSPLFTL-NQSHDNLLTLSWKKVPLLTVSSWR 622
Y F + N +H + WK L VS W+
Sbjct: 550 YHKDFVIDNDNH--WMFQGWKGRVLYAVSCWK 579
>TAIR|locus:2148293 [details] [associations]
symbol:AT5G59450 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0010200 "response to chitin" evidence=IEP;RCA]
Pfam:PF03514 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0003700 GO:GO:0006351 GO:GO:0010200 EMBL:AB025604
InterPro:IPR005202 PROSITE:PS50985 EMBL:AY035001 EMBL:AY062942
EMBL:AF036307 IPI:IPI00541926 PIR:T51233 RefSeq:NP_200753.1
UniGene:At.29225 UniGene:At.63919 UniGene:At.72775 STRING:Q9LTI5
EnsemblPlants:AT5G59450.1 GeneID:836064 KEGG:ath:AT5G59450
GeneFarm:4255 TAIR:At5g59450 eggNOG:NOG254902 HOGENOM:HOG000238576
InParanoid:Q9LTI5 OMA:KPATISK PhylomeDB:Q9LTI5
ProtClustDB:CLSN2685117 Genevestigator:Q9LTI5 Uniprot:Q9LTI5
Length = 610
Score = 396 (144.5 bits), Expect = 1.8e-36, P = 1.8e-36
Identities = 106/382 (27%), Positives = 190/382 (49%)
Query: 254 LTKALIDCACLVES-EPDKAVKSLVRLRGSVCAHGNPTERVAYYFTEALYKRLTQRAEKS 312
L L CA V S + +A L +R ++G+ T+R+A+YF EAL R+T
Sbjct: 224 LRSLLTQCAQAVASFDQRRATDKLKEIRAHSSSNGDGTQRLAFYFAEALEARITGNISPP 283
Query: 313 IT----TLEANCEDCILSFKTLNDACPYSKFAYLTANQAILEATENASHIHIVDFGIVQG 368
++ + + D + ++K CP Y AN++I E A+ +HIVDFG++ G
Sbjct: 284 VSNPFPSSTTSMVDILKAYKLFVHTCPIYVTDYFAANKSIYELAMKATKLHIVDFGVLYG 343
Query: 369 IQWSFLLQALANRPTGKPVKVRISGIPAPALGKSPAASLLATGDRLREFAGSLSLNLEFE 428
QW LL+AL+ RP G P+ +R++GI P G P+ + TG RL+ F ++ EF
Sbjct: 344 FQWPCLLRALSKRPGGPPM-LRVTGIELPQAGFRPSDRVEETGRRLKRFCDQFNVPFEFN 402
Query: 429 PILIPIRKLRASSFRVDPNEALVVNFMLQLNSLLDDNRLAVEN----ALQMAKSLNPIVV 484
I + ++P E VVN + +L D+ +++++ L++ + +NP +
Sbjct: 403 FIAKKWETITLDELMINPGETTVVNCIHRLQYTPDET-VSLDSPRDTVLKLFRDINPDLF 461
Query: 485 TLAEYEANLNRTGFLARFKNALKYYTAVFESLEPNMTTDSD--ERFQVERQILGPRIANL 542
AE N F+ RF+ AL +Y+++F+ + + + + R +ER++L ++
Sbjct: 462 VFAEINGMYNSPFFMTRFREALFHYSSLFDMFDTTIHAEDEYKNRSLLERELLVRDAMSV 521
Query: 543 LAPEKQGAKR-ERVEDIENWRIFMENSDFEGIPFSHYALSQA-EILLWNYNYSPLFTLNQ 600
++ E GA+R R E + WR+ + + F+ S + +A EI+ Y+ F ++
Sbjct: 522 ISCE--GAERFARPETYKQWRVRILRAGFKPATISKQIMKEAKEIVRKRYHRD--FVID- 576
Query: 601 SHDNLLTLSWKKVPLLTVSSWR 622
S +N + WK + S W+
Sbjct: 577 SDNNWMLQGWKGRVIYAFSCWK 598
>TAIR|locus:2025032 [details] [associations]
symbol:AT1G07520 "AT1G07520" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0010200 "response to chitin" evidence=IEP;RCA] [GO:0002679
"respiratory burst involved in defense response" evidence=RCA]
[GO:0035556 "intracellular signal transduction" evidence=RCA]
Pfam:PF03514 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0006355 GO:GO:0006351 GO:GO:0010200 EMBL:AC022464
InterPro:IPR005202 PROSITE:PS50985 PIR:T51232 eggNOG:NOG319005
EMBL:AB493440 EMBL:BX839686 IPI:IPI00525480 IPI:IPI01019456
RefSeq:NP_172232.1 UniGene:At.63938 UniGene:At.71785 STRING:Q3EDH0
PRIDE:Q3EDH0 GeneID:837266 KEGG:ath:AT1G07520 GeneFarm:4253
TAIR:At1g07520 InParanoid:Q3EDH0 OMA:VRIENEV Genevestigator:Q3EDH0
Uniprot:Q3EDH0
Length = 695
Score = 372 (136.0 bits), Expect = 2.4e-32, P = 2.4e-32
Identities = 106/377 (28%), Positives = 175/377 (46%)
Query: 261 CACLVESEPDKAVKSLVRLRGSVCAH-GNPTERVAYYFTEALYKRLT-------QRAEKS 312
CA V + L+R C+ G+ ++R+A++F AL RL Q S
Sbjct: 322 CAQSVSAGDKITADDLLRQIRKQCSPVGDASQRLAHFFANALEARLEGSTGTMIQSYYDS 381
Query: 313 ITTLEANCEDCILSFKTLNDACPYSKFAYLTANQAILEATENASHIHIVDFGIVQGIQWS 372
I++ + + S+ A P+ Y +N+ IL+A ++AS +HIVDFGI+ G QW
Sbjct: 382 ISSKKRTAAQILKSYSVFLSASPFMTLIYFFSNKMILDAAKDASVLHIVDFGILYGFQWP 441
Query: 373 FLLQALANRPTGKPVKVRISGIPAPALGKSPAASLLATGDRLREFAGSLSLNLEFEPILI 432
+Q L+ G K+RI+GI P G P + TG RL E+ + E+ I
Sbjct: 442 MFIQHLSKSNPGLR-KLRITGIEIPQHGLRPTERIQDTGRRLTEYCKRFGVPFEYNAIAS 500
Query: 433 PI-RKLRASSFRVDPNEALVVNFMLQLNSLLD----DNRLAVENALQMAKSLNPIVVTLA 487
++ F++ PNE L VN +L+ +L D + + L++ + +NP V +
Sbjct: 501 KNWETIKMEEFKIRPNEVLAVNAVLRFKNLRDVIPGEEDCPRDGFLKLIRDMNPNVFLSS 560
Query: 488 EYEANLNRTGFLARFKNALKYYTAVFESLEPNMTTDSDERFQVERQILGPRIANLLAPEK 547
+ N F RFK AL +Y+A+F+ ++ ++ ER E + G + N++A E
Sbjct: 561 TVNGSFNAPFFTTRFKEALFHYSALFDLFGATLSKENPERIHFEGEFYGREVMNVIACE- 619
Query: 548 QGAKR-ERVEDIENWRIFMENSDFEGIPFSH--YALSQAEILLWNYNYSPLFTLNQSHDN 604
G R ER E + W++ M + F+ P L + ++ W Y+ F L++ N
Sbjct: 620 -GVDRVERPETYKQWQVRMIRAGFKQKPVEAELVQLFREKMKKWGYHKD--FVLDED-SN 675
Query: 605 LLTLSWKKVPLLTVSSW 621
WK L + S W
Sbjct: 676 WFLQGWKGRILFSSSCW 692
>TAIR|locus:2008086 [details] [associations]
symbol:SCL3 "AT1G50420" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0009739 "response to gibberellin
stimulus" evidence=IEP] Pfam:PF03514 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003700 GO:GO:0006351
GO:GO:0009739 EMBL:AC012561 HOGENOM:HOG000238577 InterPro:IPR005202
PROSITE:PS50985 EMBL:AY056154 EMBL:AY091260 EMBL:AF036301
IPI:IPI00539428 PIR:E96540 PIR:T51235 RefSeq:NP_175459.1
UniGene:At.14826 IntAct:Q9LPR8 STRING:Q9LPR8
EnsemblPlants:AT1G50420.1 GeneID:841464 KEGG:ath:AT1G50420
GeneFarm:4258 TAIR:At1g50420 eggNOG:NOG310008 InParanoid:Q9LPR8
OMA:MVHVIDL PhylomeDB:Q9LPR8 ProtClustDB:CLSN2913643
Genevestigator:Q9LPR8 Uniprot:Q9LPR8
Length = 482
Score = 220 (82.5 bits), Expect = 4.4e-30, Sum P(2) = 4.4e-30
Identities = 76/242 (31%), Positives = 113/242 (46%)
Query: 254 LTKALIDCACLVESEP-DKAVKSLVRLRGSVCAHGNPTERVAYYFTEALYKRLTQ----- 307
L L+ CA V S A +L +L G+ +R+A YFTEAL R+ +
Sbjct: 54 LIHLLLTCANHVASGSLQNANAALEQLSHLASPDGDTMQRIAAYFTEALANRILKSWPGL 113
Query: 308 -RAEKSITTLEANCEDCILSFKTLNDACPYSKFAYLTANQAILEATENASHIHIVDFGIV 366
+A + T N + I + + P K +YL N+AILEA E +H++D
Sbjct: 114 YKALNATQTRTNNVSEEIHVRRLFFEMFPILKVSYLLTNRAILEAMEGEKMVHVIDLDAS 173
Query: 367 QGIQWSFLLQALANRPTGKPVKVRISGIPAPALGKSPAASLLATGDRLREFAGSLSLNLE 426
+ QW LLQA +RP G P +RI+G+ + +A RL E A L + +
Sbjct: 174 EPAQWLALLQAFNSRPEGPP-HLRITGVHH----QKEVLEQMA--HRLIEEAEKLDIPFQ 226
Query: 427 FEPILIPIRKLRASSFRVDPNEALVVNFMLQLNSLL--DDNRLAVENALQMAKSLNPIVV 484
F P++ + L RV EAL V+ +LQL++ L DD+ + AL+ NP V
Sbjct: 227 FNPVVSRLDCLNVEQLRVKTGEALAVSSVLQLHTFLASDDDLMRKNCALRFQN--NPSGV 284
Query: 485 TL 486
L
Sbjct: 285 DL 286
Score = 186 (70.5 bits), Expect = 4.4e-30, Sum P(2) = 4.4e-30
Identities = 43/144 (29%), Positives = 76/144 (52%)
Query: 479 LNPIVVTLAEYEANLNRTGFLARFKNALKYYTAVFESLEPNMTTDSDERFQVERQILGPR 538
L+P V+ + E +++ N + + R +L Y A+F+ LE + S +R +VE+ + G
Sbjct: 339 LSPKVMVVTEQDSDHNGSTLMERLLESLYTYAALFDCLETKVPRTSQDRIKVEKMLFGEE 398
Query: 539 IANLLAPEKQGAKRERVEDIENWRIFMENSDFEGIPFSHYALSQAEILLWNYNYSPLFTL 598
I N+++ E +RER E +E W ++ + F +P S+YA+ QA LL +
Sbjct: 399 IKNIISCEGF-ERRERHEKLEKWSQRIDLAGFGNVPLSYYAMLQARRLLQGCGFDGYRIK 457
Query: 599 NQSHDNLLTLSWKKVPLLTVSSWR 622
+S + W+ PL +VS+WR
Sbjct: 458 EES--GCAVICWQDRPLYSVSAWR 479
>TAIR|locus:2040701 [details] [associations]
symbol:AT2G37650 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] EMBL:AC004684 Pfam:PF03514 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003700 GO:GO:0006351
InterPro:IPR005202 PROSITE:PS50985 HOGENOM:HOG000238576
eggNOG:NOG319005 EMBL:AF036306 IPI:IPI00536640 PIR:T02531
PIR:T51240 RefSeq:NP_181301.1 UniGene:At.26205 UniGene:At.66411
PaxDb:O80933 PRIDE:O80933 EnsemblPlants:AT2G37650.1 GeneID:818342
KEGG:ath:AT2G37650 GeneFarm:4256 TAIR:At2g37650 InParanoid:O80933
OMA:WERVERP PhylomeDB:O80933 ProtClustDB:CLSN2912903
Genevestigator:O80933 Uniprot:O80933
Length = 718
Score = 345 (126.5 bits), Expect = 7.9e-29, P = 7.9e-29
Identities = 98/378 (25%), Positives = 176/378 (46%)
Query: 254 LTKALIDCACLVESEPDKAVKSLVR-LRGSVCAHGNPTERVAYYFTEALYKRLT---QRA 309
L LI CA V ++ + L++ +R G+ +R+A+ F L RL +
Sbjct: 344 LRSLLIHCAQAVAADDRRCAGQLLKQIRLHSTPFGDGNQRLAHCFANGLEARLAGTGSQI 403
Query: 310 EKSITTLEANCEDCILSFKTLNDACPYSKFAYLTANQAILEATENASHIHIVDFGIVQGI 369
K I + + + + + CP+ K +Y N+ I + N+ +H++DFGI+ G
Sbjct: 404 YKGIVSKPRSAAAVLKAHQLFLACCPFRKLSYFITNKTIRDLVGNSQRVHVIDFGILYGF 463
Query: 370 QWSFLLQALANRPTGKPVKVRISGIPAPALGKSPAASLLATGDRLREFAGSLSLNLEFEP 429
QW L+ + G P KVRI+GI P G PA + TG RL +A + E++
Sbjct: 464 QWPTLIHRFSMY--GSP-KVRITGIEFPQPGFRPAQRVEETGQRLAAYAKLFGVPFEYKA 520
Query: 430 ILIPIRKLRASSFRVDPNEALVVNFMLQLNSLLDDNRLAVENA----LQMAKSLNPIVVT 485
I ++ +D +E VVN + + +L D++ + VE+ L + +NP +
Sbjct: 521 IAKKWDAIQLEDLDIDRDEITVVNCLYRAENLHDES-VKVESCRDTVLNLIGKINPDLFV 579
Query: 486 LAEYEANLNRTGFLARFKNALKYYTAVFESLEPNMTTDSDERFQVERQILGPRIANLLAP 545
N F+ RF+ AL +++++F+ LE + + +ER +E ++ G N++A
Sbjct: 580 FGIVNGAYNAPFFVTRFREALFHFSSIFDMLETIVPREDEERMFLEMEVFGREALNVIAC 639
Query: 546 EKQGAKR-ERVEDIENWRIFMENSDFEGIPFSHYALSQAEILLWNYNYSPLFTLNQSHDN 604
E G +R ER E + W + S +PF + + + + Y F ++Q +
Sbjct: 640 E--GWERVERPETYKQWHVRAMRSGLVQVPFDPSIMKTSLHKVHTF-YHKDFVIDQDNRW 696
Query: 605 LLTLSWKKVPLLTVSSWR 622
LL WK ++ +S W+
Sbjct: 697 LLQ-GWKGRTVMALSVWK 713
>TAIR|locus:2101801 [details] [associations]
symbol:HAM2 "AT3G60630" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0010492 "maintenance of shoot apical meristem
identity" evidence=IGI] [GO:0030154 "cell differentiation"
evidence=IMP] [GO:0048768 "root hair cell tip growth" evidence=IMP]
[GO:0051301 "cell division" evidence=IMP] [GO:0007020 "microtubule
nucleation" evidence=RCA] Pfam:PF03514 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0051301 GO:GO:0003700 GO:GO:0006351
GO:GO:0048768 GO:GO:0010492 EMBL:AL162295 InterPro:IPR005202
PROSITE:PS50985 EMBL:AY064062 EMBL:AY096372 EMBL:EU550731
EMBL:EU550732 EMBL:EU550733 EMBL:EU550734 EMBL:EU550735
EMBL:EU550736 EMBL:EU550737 EMBL:EU550738 EMBL:EU550739
EMBL:EU550740 EMBL:EU550741 EMBL:EU550742 EMBL:EU550743
EMBL:EU550744 EMBL:EU550745 EMBL:EU550746 EMBL:EU550747
EMBL:EU550748 EMBL:EU550749 EMBL:EU550750 EMBL:EU550752
EMBL:EU550754 EMBL:EU550751 EMBL:EU550753 IPI:IPI00520916
PIR:T47874 RefSeq:NP_191622.1 UniGene:At.27084 IntAct:Q9M000
EnsemblPlants:AT3G60630.1 GeneID:825234 KEGG:ath:AT3G60630
GeneFarm:4227 TAIR:At3g60630 eggNOG:NOG261649 HOGENOM:HOG000239326
InParanoid:Q9M000 OMA:ANQTILE PhylomeDB:Q9M000
ProtClustDB:CLSN2683334 Genevestigator:Q9M000 Uniprot:Q9M000
Length = 623
Score = 326 (119.8 bits), Expect = 1.7e-26, Sum P(2) = 1.7e-26
Identities = 110/346 (31%), Positives = 163/346 (47%)
Query: 289 PTERVAYYFTEALYKRLTQRAEKSITTLEA--NCEDCILSFKTLNDACPYSKFAYLTANQ 346
P R A Y TEAL+ L Q + S +L N I +++ ++ P+ +F TANQ
Sbjct: 291 PFHRAASYITEALHS-LLQDSSLSPPSLSPPQNLIFRIAAYRAFSETSPFLQFVNFTANQ 349
Query: 347 AILEATENASHIHIVDFGIVQGIQWSFLLQALA---NRPTGKPVKVRISGIPAPALGKSP 403
ILE+ E IHIVDF I G QW+ L+Q LA NR + P ++I+ +P+ S
Sbjct: 350 TILESFEGFDRIHIVDFDIGYGGQWASLIQELAGKRNRSSSAP-SLKITAFASPST-VSD 407
Query: 404 AASLLATGDRLREFAGSLSLNLEFE----PILIPIRKLRASSFRVDPNEALVVNFMLQLN 459
L T + LR FAG ++ E E IL+ S FR EA+ VN L ++
Sbjct: 408 EFELRFTEENLRSFAGETGVSFEIELLNMEILLNPTYWPLSLFRSSEKEAIAVN--LPIS 465
Query: 460 SLLDDNRLAVENALQMAKSLNPIVVTLAEYEANLNRTG-FLARFKNALKYYTAVFESLEP 518
S++ + L+ K ++P VV ++ + N F NAL+YYT++ ESL+
Sbjct: 466 SMVSGYLPLI---LRFLKQISPNVVVCSDRSCDRNNDAPFPNGVINALQYYTSLLESLDS 522
Query: 519 NMTTDSDERFQVERQILGPRIANLLAPEKQGAKRERVEDIENWRIFMENSDFEGIPFSHY 578
+++ +ER + P I LL + +R WR F + S
Sbjct: 523 GNLNNAEAATSIERFCVQPSIQKLLTNRYRWMERS-----PPWRSLFGQCGFTPVTLSQT 577
Query: 579 ALSQAEILLWNYNYSPLFTLN--QSHDNLLTLSWKKVPLLTVSSWR 622
A +QAE LL N F L QS L L W++ L+TVS+W+
Sbjct: 578 AETQAEYLLQR-NPMRGFHLEKRQSSSPSLVLCWQRKELVTVSAWK 622
Score = 37 (18.1 bits), Expect = 1.7e-26, Sum P(2) = 1.7e-26
Identities = 7/14 (50%), Positives = 8/14 (57%)
Query: 73 PNFGYGFTGPGFPD 86
P FGYGF P+
Sbjct: 156 PLFGYGFPFQNAPE 169
>TAIR|locus:2120106 [details] [associations]
symbol:SHR "AT4G37650" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS;TAS] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0008356 "asymmetric cell division"
evidence=IMP] [GO:0009956 "radial pattern formation" evidence=IMP]
[GO:0032350 "regulation of hormone metabolic process" evidence=NAS]
[GO:0043565 "sequence-specific DNA binding" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0055072 "iron ion
homeostasis" evidence=IMP] [GO:0045930 "negative regulation of
mitotic cell cycle" evidence=IMP] [GO:0048366 "leaf development"
evidence=IMP] Pfam:PF03514 GO:GO:0005634 GO:GO:0005737
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 GO:GO:0007049 EMBL:AL035605 EMBL:AL161591
GO:GO:0048366 GO:GO:0008356 GO:GO:0055072 GO:GO:0009956
GO:GO:0032350 InterPro:IPR005202 PROSITE:PS50985 EMBL:AF233752
EMBL:BT033026 EMBL:AY074547 IPI:IPI00525426 PIR:T04722
RefSeq:NP_195480.1 UniGene:At.2816 UniGene:At.71893 IntAct:Q9SZF7
STRING:Q9SZF7 PaxDb:Q9SZF7 PRIDE:Q9SZF7 EnsemblPlants:AT4G37650.1
GeneID:829919 KEGG:ath:AT4G37650 GeneFarm:4260 TAIR:At4g37650
eggNOG:NOG301144 HOGENOM:HOG000078767 InParanoid:Q9SZF7 OMA:EIGNRME
PhylomeDB:Q9SZF7 ProtClustDB:CLSN2685807 Genevestigator:Q9SZF7
Uniprot:Q9SZF7
Length = 531
Score = 305 (112.4 bits), Expect = 1.3e-24, P = 1.3e-24
Identities = 106/389 (27%), Positives = 183/389 (47%)
Query: 258 LIDCA-CLVESEPDKAVKSLVRLRGSVCAHGNPTERVAYYFTEALYKRLT---QRAEKSI 313
L++ A + + +A + L L +G+ +++A YF +AL+ R+T +R +++
Sbjct: 147 LLEAARAFSDKDTARAQQILWTLNELSSPYGDTEQKLASYFLQALFNRMTGSGERCYRTM 206
Query: 314 TTLEANCEDCILSF--KTL---NDACPYSKFAYLTANQAILEATENASHIHIVDFGIVQG 368
T A + C KT+ + P++ F ++ AN AILEA + + IHIVD
Sbjct: 207 VTAAATEKTCSFESTRKTVLKFQEVSPWATFGHVAANGAILEAVDGEAKIHIVDISSTFC 266
Query: 369 IQWSFLLQALANRPTGKPVKVRISGIP-APALGKSPAAS---LLATGDRLREFAGSLSLN 424
QW LL+ALA R P +R++ + A AS + G+R+ +FA + +
Sbjct: 267 TQWPTLLEALATRSDDTP-HLRLTTVVVANKFVNDQTASHRMMKEIGNRMEKFARLMGVP 325
Query: 425 LEFEPI--LIPIRKLRASSFRVDPNEALVVNFMLQLNSLLDDNRLAVENA-LQMAKSLNP 481
+F I + + + + V P+E L +N + ++ + +R + +A + + L P
Sbjct: 326 FKFNIIHHVGDLSEFDLNELDVKPDEVLAINCVGAMHGIA--SRGSPRDAVISSFRRLRP 383
Query: 482 IVVTLAEYEANL--NRTG-----FLARFKNALKYYTAVFESLEPNMTTDSDERFQVERQI 534
+VT+ E EA+L G FL F L+++ FES E + S+ER +ER
Sbjct: 384 RIVTVVEEEADLVGEEEGGFDDEFLRGFGECLRWFRVCFESWEESFPRTSNERLMLERAA 443
Query: 535 LGPRIANLLAPEKQGAKRERVEDIENWRIFMENSDFEGIPFSHYALSQAEILLWNYNYSP 594
G I +L+A E + ER E W M NS F + +S LL Y
Sbjct: 444 -GRAIVDLVACEPSDST-ERRETARKWSRRMRNSGFGAVGYSDEVADDVRALLRRYKEG- 500
Query: 595 LFTLNQSHDNL-LTLSWKKVPLLTVSSWR 622
++++ Q D + L W+ P++ S+WR
Sbjct: 501 VWSMVQCPDAAGIFLCWRDQPVVWASAWR 529
>TAIR|locus:2126901 [details] [associations]
symbol:HAM3 "AT4G00150" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0010492 "maintenance of shoot apical meristem identity"
evidence=IGI] [GO:0030154 "cell differentiation" evidence=IMP]
[GO:0048768 "root hair cell tip growth" evidence=IMP] [GO:0051301
"cell division" evidence=IMP] [GO:0007623 "circadian rhythm"
evidence=IEP] Pfam:PF03514 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0051301 GO:GO:0007623 GO:GO:0003700
GO:GO:0006351 GO:GO:0048768 GO:GO:0010492 EMBL:AL161471
EMBL:AF069299 InterPro:IPR005202 PROSITE:PS50985
HOGENOM:HOG000239326 eggNOG:NOG320780 EMBL:AF462831 EMBL:AY133537
EMBL:AF036303 EMBL:EU550755 EMBL:EU550756 EMBL:EU550757
EMBL:EU550758 EMBL:EU550759 EMBL:EU550760 EMBL:EU550761
EMBL:EU550762 EMBL:EU550763 EMBL:EU550764 EMBL:EU550765
EMBL:EU550766 EMBL:EU550767 EMBL:EU550768 EMBL:EU550769
EMBL:EU550770 EMBL:EU550771 EMBL:EU550772 EMBL:EU550773
EMBL:EU550774 EMBL:EU550775 EMBL:EU550776 EMBL:EU550777
IPI:IPI00542979 PIR:T01343 PIR:T51237 RefSeq:NP_191926.1
UniGene:At.3732 UniGene:At.67226 IntAct:O81316
EnsemblPlants:AT4G00150.1 GeneID:828208 KEGG:ath:AT4G00150
GeneFarm:4228 TAIR:At4g00150 InParanoid:O81316 OMA:KTPPWRA
PhylomeDB:O81316 ProtClustDB:CLSN2916162 Genevestigator:O81316
Uniprot:O81316
Length = 558
Score = 299 (110.3 bits), Expect = 7.9e-24, P = 7.9e-24
Identities = 93/355 (26%), Positives = 170/355 (47%)
Query: 254 LTKALIDCACLVESEPDKAVKSLVRLRGSVCAH-GNPTERVAYYFTEALYKRLTQRAEKS 312
+T+ L+ A ++ES+ A L RL + + G P ER A+YF EAL L ++
Sbjct: 205 ITEQLVKAAEVIESDTCLAQGILARLNQQLSSPVGKPLERAAFYFKEAL-NNLLHNVSQT 263
Query: 313 ITTLEANCEDCILSFKTLNDACPYSKFAYLTANQAILEATENASHIHIVDFGIVQGIQWS 372
+ + I ++K+ ++ P +FA T+NQA+LE+ +HI+DF I G QW+
Sbjct: 264 LNPYSLIFK--IAAYKSFSEISPVLQFANFTSNQALLESFHGFHRLHIIDFDIGYGGQWA 321
Query: 373 FLLQALANRPTGKPVKVRISGIPAPALGKSPAASLLATGDRLREFAGSLSLNLEFEPILI 432
L+Q L R P+ ++I+ +PA L T D L+ FA ++++L+ + + +
Sbjct: 322 SLMQELVLRDNAAPLSLKITVFASPA--NHDQLELGFTQDNLKHFASEINISLDIQVLSL 379
Query: 433 PIRKLRASSF-RVDPNEALVVNFMLQLNSLLDDNRLAVENALQMAKSLNPIVVTLAEYEA 491
+ L + S+ EA+ VN S + L + L+ K L+P ++ ++
Sbjct: 380 DL--LGSISWPNSSEKEAVAVNI-----SAASFSHLPL--VLRFVKHLSPTIIVCSDRGC 430
Query: 492 NLNRTGFLARFKNALKYYTAVFESLEPNMTTDSDERFQVERQILGPRIANLLAPEKQGAK 551
F + ++L +TA+FESL+ + + D ++ER ++ P I L+ + +
Sbjct: 431 ERTDLPFSQQLAHSLHSHTALFESLDA-VNANLDAMQKIERFLIQPEIEKLVLDRSRPIE 489
Query: 552 RERVEDIENWRIFMENSDFEGIPFSHYALSQAEILLWNYNYSPLFTLNQSHDNLL 606
R + W+ F + S++ SQAE L+ F + + H++LL
Sbjct: 490 RPMM----TWQAMFLQMGFSPVTHSNFTESQAECLVQRTPVRG-FHVEKKHNSLL 539
Score = 160 (61.4 bits), Expect = 2.5e-08, P = 2.5e-08
Identities = 53/216 (24%), Positives = 105/216 (48%)
Query: 410 TGDRLREFAGSLSLNLEFEPILIPIRKLRASSF-RVDPNEALVVNFMLQLNSLLDDNRLA 468
T D L+ FA ++++L+ + + + + L + S+ EA+ VN S + L
Sbjct: 357 TQDNLKHFASEINISLDIQVLSLDL--LGSISWPNSSEKEAVAVNI-----SAASFSHLP 409
Query: 469 VENALQMAKSLNPIVVTLAEYEANLNRTGFLARFKNALKYYTAVFESLEPNMTTDSDERF 528
+ L+ K L+P ++ ++ F + ++L +TA+FESL+ + + D
Sbjct: 410 L--VLRFVKHLSPTIIVCSDRGCERTDLPFSQQLAHSLHSHTALFESLDA-VNANLDAMQ 466
Query: 529 QVERQILGPRIANLLAPEKQGAKRERVEDIENWRIFMENSDFEGIPFSHYALSQAEILLW 588
++ER ++ P I L+ + +R + W+ F + S++ SQAE L+
Sbjct: 467 KIERFLIQPEIEKLVLDRSRPIERPMM----TWQAMFLQMGFSPVTHSNFTESQAECLVQ 522
Query: 589 NYNYSPL--FTLNQSHDNLLTLSWKKVPLLTVSSWR 622
+P+ F + + H++LL L W++ L+ VS+WR
Sbjct: 523 R---TPVRGFHVEKKHNSLL-LCWQRTELVGVSAWR 554
>TAIR|locus:2055622 [details] [associations]
symbol:HAM1 "AT2G45160" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0010492 "maintenance of shoot apical meristem
identity" evidence=IGI] [GO:0030154 "cell differentiation"
evidence=IMP] [GO:0048768 "root hair cell tip growth" evidence=IMP]
[GO:0051301 "cell division" evidence=IMP] Pfam:PF03514
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0051301
GO:GO:0003700 GO:GO:0006351 GO:GO:0048768 GO:GO:0010492
InterPro:IPR005202 PROSITE:PS50985 HOGENOM:HOG000239326
ProtClustDB:CLSN2683334 EMBL:BT004053 EMBL:BT020591 IPI:IPI00534274
PIR:B84887 RefSeq:NP_182041.1 UniGene:At.27046 UniGene:At.67081
UniGene:At.74179 STRING:Q7XJM8 PaxDb:Q7XJM8 PRIDE:Q7XJM8
EnsemblPlants:AT2G45160.1 GeneID:819124 KEGG:ath:AT2G45160
GeneFarm:4226 TAIR:At2g45160 eggNOG:NOG320780 InParanoid:Q7XJM8
OMA:HRWIERS PhylomeDB:Q7XJM8 Genevestigator:Q7XJM8 Uniprot:Q7XJM8
Length = 640
Score = 299 (110.3 bits), Expect = 1.2e-23, P = 1.2e-23
Identities = 98/348 (28%), Positives = 163/348 (46%)
Query: 286 HGNPTERVAYYFTEALYKRLTQRAEKSITTLEANCEDCILSFKTLNDACPYSKFAYLTAN 345
H +P +R A + EAL + + + T E N I ++++ ++ P+ +F TAN
Sbjct: 310 HKSPFQRAASHIAEALLSLIHNESSPPLITPE-NLILRIAAYRSFSETSPFLQFVNFTAN 368
Query: 346 QAILEATENAS--HIHIVDFGIVQGIQWSFLLQALAN----RPTGKPVKVRISGIPAPAL 399
Q+ILE+ + IHI+DF + G QWS L+Q LA+ R + ++++ P
Sbjct: 369 QSILESCNESGFDRIHIIDFDVGYGGQWSSLMQELASGVGGRRRNRASSLKLTVFAPPPS 428
Query: 400 GKSPAASLLATGDRLREFAGSLSLNLEFEPILIPIRKLRAS---SFRVDPNEALVVNFML 456
S L T + L+ FAG + + E E + + + A S R EA+ VN L
Sbjct: 429 TVSDEFELRFTEENLKTFAGEVKIPFEIELLSVELLLNPAYWPLSLRSSEKEAIAVN--L 486
Query: 457 QLNSLLDDNRLAVENALQMAKSLNPIVVTLAEYEANLNRTGFLARFKNALKYYTAVFESL 516
+NS+ + L+ K L+P +V ++ + N F ++L+Y+T++ ESL
Sbjct: 487 PVNSVASGYLPLI---LRFLKQLSPNIVVCSDRGCDRNDAPFPNAVIHSLQYHTSLLESL 543
Query: 517 EPNMTTDSDERFQVERQILGPRIANLLAPEKQGAKRER-VEDIENWRIFMENSDFEGIPF 575
+ N D +ER + P I LL KR R +E WRI F
Sbjct: 544 DANQNQDDSS---IERFWVQPSIEKLLM------KRHRWIERSPPWRILFTQCGFSPASL 594
Query: 576 SHYALSQAEILLWNYNYSPLFTLN-QSHDNLLTLSWKKVPLLTVSSWR 622
S A +QAE LL +P+ + + + L + W++ L+TVS+W+
Sbjct: 595 SQMAEAQAECLLQR---NPVRGFHVEKRQSSLVMCWQRKELVTVSAWK 639
>UNIPROTKB|Q84MM9 [details] [associations]
symbol:MOC1 "Protein MONOCULM 1" species:39947 "Oryza
sativa Japonica Group" [GO:0005634 "nucleus" evidence=IDA]
[GO:0010014 "meristem initiation" evidence=IMP] Pfam:PF03514
GO:GO:0005634 GO:GO:0006355 GO:GO:0006351 InterPro:IPR005202
PROSITE:PS50985 EMBL:AY242058 EMBL:AP003616 Gramene:Q84MM9
eggNOG:NOG323432 GO:GO:0010014 Uniprot:Q84MM9
Length = 441
Score = 275 (101.9 bits), Expect = 1.6e-21, P = 1.6e-21
Identities = 87/268 (32%), Positives = 129/268 (48%)
Query: 251 AQPLTK-ALIDCACLVESEPDKAVKSLVR--LRGSVCAHGNPTERVAYYFTEALYKRLTQ 307
A P T+ L+ CA L++ A + L + G+ +R+AY+F AL R+
Sbjct: 46 AAPSTRDLLLACADLLQRGDLPAARRAAEIVLAAAASPRGDAADRLAYHFARALALRVDA 105
Query: 308 RAEKSITTLEANCEDCILS--FKTLNDACPYSKFAYLTANQAILEATENASHIHIVDFGI 365
+A + S + N P+ +FA+LTANQAILEA + A +HI+D
Sbjct: 106 KAGHGHVVVGGGAARPASSGAYLAFNQIAPFLRFAHLTANQAILEAVDGARRVHILDLDA 165
Query: 366 VQGIQWSFLLQALANR--PTGKPVKVRISGIPAPALGKSPAASLLATGDRLREFAGSLSL 423
V G+QW LLQA+A R P P +VR++G A +LL TG+RLR FA S+ L
Sbjct: 166 VHGVQWPPLLQAIAERADPALGPPEVRVTGAGADR------DTLLRTGNRLRAFARSIHL 219
Query: 424 NLEFEPILIPIRKLR--------------------ASSFRVDPNEALVVNFMLQLNSLLD 463
F P+L+ A+ P+E L VN ++ L++L
Sbjct: 220 PFHFTPLLLSCATTAPHHVAGTSTGAAAAASTAAAATGLEFHPDETLAVNCVMFLHNLAG 279
Query: 464 DNRLAVENALQMAKSLNPIVVTLAEYEA 491
+ LA L+ K+++P VVT+AE EA
Sbjct: 280 HDELAA--FLKWVKAMSPAVVTIAEREA 305
Score = 208 (78.3 bits), Expect = 7.6e-14, P = 7.6e-14
Identities = 64/190 (33%), Positives = 95/190 (50%)
Query: 439 ASSFRVDPNEALVVNFMLQLNSLLDDNRLAVENALQMAKSLNPIVVTLAEYEANLNRTG- 497
A+ P+E L VN ++ L++L + LA L+ K+++P VVT+AE EA G
Sbjct: 255 ATGLEFHPDETLAVNCVMFLHNLAGHDELAA--FLKWVKAMSPAVVTIAEREAGGGGGGG 312
Query: 498 -----FLARFKNALKYYTAVFESLEPNMTTDSDERFQVERQILGPRIANLLAPEKQGAKR 552
R A+ +Y+AVFE+LE + S ER VE+++LG I + P G +
Sbjct: 313 DHIDDLPRRVGVAMDHYSAVFEALEATVPPGSRERLAVEQEVLGREIEAAVGPS--GGRW 370
Query: 553 ERVEDIENWRIFMENSDFEGIPFSHYALSQAEILLWNYNYSPLFTLNQSHDNLLTLSWKK 612
R IE W + F P S +A+SQA +LL +Y L Q L W+
Sbjct: 371 WR--GIERWGGAARAAGFAARPLSAFAVSQARLLL-RLHYPSEGYLVQEARGACFLGWQT 427
Query: 613 VPLLTVSSWR 622
PLL+VS+W+
Sbjct: 428 RPLLSVSAWQ 437
>TAIR|locus:2083073 [details] [associations]
symbol:AT3G49950 "AT3G49950" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] Pfam:PF03514 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0003700 GO:GO:0006351 EMBL:AL132978
InterPro:IPR005202 PROSITE:PS50985 eggNOG:NOG309215 EMBL:BT012553
EMBL:AK226623 IPI:IPI00534186 PIR:T45848 RefSeq:NP_190564.1
UniGene:At.50260 EnsemblPlants:AT3G49950.1 GeneID:824157
KEGG:ath:AT3G49950 GeneFarm:4259 TAIR:At3g49950
HOGENOM:HOG000241523 InParanoid:Q9SN22 OMA:MSMDFRV PhylomeDB:Q9SN22
ProtClustDB:CLSN2684384 Genevestigator:Q9SN22 Uniprot:Q9SN22
Length = 410
Score = 264 (98.0 bits), Expect = 2.0e-20, P = 2.0e-20
Identities = 94/390 (24%), Positives = 177/390 (45%)
Query: 254 LTKALIDCACLVESEPDKAVKSLVRLRGSVCA-HGNPTERVAYYFTEALYKRLTQRAEKS 312
+ + L+ CA ++S ++ + ++ G+ T+R+ F AL R +
Sbjct: 27 MEQLLLHCATAIDSNDAALTHQILWVLNNIAPPDGDSTQRLTSAFLRALLSRAVSKTPTL 86
Query: 313 ITTLE--ANCEDC----ILSFKTLNDACPYSKFAYLTANQAILEATENASHIHIVDFGIV 366
+T+ ++ ++ D P+ +F ++ AN AIL A E S +HIVD +
Sbjct: 87 SSTISFLPQADELHRFSVVELAAFVDLTPWHRFGFIAANAAILTAVEGYSTVHIVDLSLT 146
Query: 367 QGIQWSFLLQALANRPTGKPVKVRISGIPAPA-LGKSPAASLLATGDRLREFAGSLSLNL 425
+Q L+ A+A+R P ++++ + + S G +L FA + ++ +
Sbjct: 147 HCMQIPTLIDAMASRLNKPPPLLKLTVVSSSDHFPPFINISYEELGSKLVNFATTRNITM 206
Query: 426 EFEPILIPIRKLRASS-----FRVDP---NEALVVNFMLQLNSLLDDNRLAVENALQMA- 476
EF ++P S R+ P NEALVVN + L + ++ + ++L+
Sbjct: 207 EFT--IVPSTYSDGFSSLLQQLRIYPSSFNEALVVNCHMMLRYIPEEPLTSSSSSLRTVF 264
Query: 477 ----KSLNPIVVTLAEYEANLNRTGFLARFKNALKYYTAVFESLEPNMTTDSDERFQVER 532
+SLNP +VTL E + +L + R K+A Y+ F++ + M S++R E
Sbjct: 265 LKQLRSLNPRIVTLIEEDVDLTSENLVNRLKSAFNYFWIPFDTTDTFM---SEQRRWYEA 321
Query: 533 QILGPRIANLLAPEKQGAKR-ERVEDIENWRIFMENSDFEGIPFSHYALSQAEILLWNYN 591
+I +I N++A K+GA+R ER E W M ++F G+ A++ + +L +
Sbjct: 322 EISW-KIENVVA--KEGAERVERTETKRRWIERMREAEFGGVRVKEDAVADVKAMLEEHA 378
Query: 592 YSPLFTLNQSHDNLLTLSWKKVPLLTVSSW 621
+ D L L+WK ++ + W
Sbjct: 379 VG-WGMKKEDDDESLVLTWKGHSVVFATVW 407
>TAIR|locus:2184625 [details] [associations]
symbol:SCL8 "AT5G52510" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0005737 "cytoplasm" evidence=IDA]
Pfam:PF03514 GO:GO:0005634 GO:GO:0005737 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0003700 GO:GO:0006351
InterPro:IPR005202 PROSITE:PS50985 EMBL:AP000378 EMBL:AF036305
EMBL:AY099686 EMBL:AY128868 IPI:IPI00531227 PIR:T51239
RefSeq:NP_200064.3 UniGene:At.22412 UniGene:At.71617 STRING:Q9FYR7
PRIDE:Q9FYR7 EnsemblPlants:AT5G52510.1 GeneID:835327
KEGG:ath:AT5G52510 GeneFarm:4234 TAIR:At5g52510 eggNOG:NOG240925
HOGENOM:HOG000239354 InParanoid:Q9FYR7 OMA:PGAPWRD PhylomeDB:Q9FYR7
ProtClustDB:CLSN2680518 Genevestigator:Q9FYR7 Uniprot:Q9FYR7
Length = 640
Score = 254 (94.5 bits), Expect = 4.5e-18, Sum P(2) = 4.5e-18
Identities = 87/281 (30%), Positives = 130/281 (46%)
Query: 359 HIVDFGIVQGIQWSFLLQALANRPTGK------PVKVRISGIPAPALG----KSPAASLL 408
H++DF I +G Q+ LL+ L+ R GK PV V+I+ + G L
Sbjct: 369 HVIDFDIGEGGQYVNLLRTLSTRRNGKSQSQNSPV-VKITAVANNVYGCLVDDGGEERLK 427
Query: 409 ATGDRLREFAGSLSLNLEFEPIL-IPIRKLRASSFRVDPNEALVVNFMLQLNSLLDDNRL 467
A GD L + L +++ F + + + L S DP+E L VN +L + D++ +
Sbjct: 428 AVGDLLSQLGDRLGISVSFNVVTSLRLGDLNRESLGCDPDETLAVNLAFKLYRVPDES-V 486
Query: 468 AVENA----LQMAKSLNPIVVTLAEYEANLNRTGFLARFKNALKYYTAVFESLEPNMTTD 523
EN L+ K L P VVTL E E N N FL R + Y A+ ES+E + +
Sbjct: 487 CTENPRDELLRRVKGLKPRVVTLVEQEMNSNTAPFLGRVSESCACYGALLESVESTVPST 546
Query: 524 SDERFQVERQILGPRIANLLAPEKQGAKR-ERVEDIENWRIFMENSDFEGIPFSHYALSQ 582
+ +R +VE I G ++ N +A E G R ER E WR+ M + FE +P S
Sbjct: 547 NSDRAKVEEGI-GRKLVNAVACE--GIDRIERCEVFGKWRMRMSMAGFELMPLSEKI--- 600
Query: 583 AEILLWNYN-YSPLFTLNQSHDNLLTLSWKKVPLLTVSSWR 622
AE + N P FT+ + + + W L S+WR
Sbjct: 601 AESMKSRGNRVHPGFTVKEDNGGVC-FGWMGRALTVASAWR 640
Score = 39 (18.8 bits), Expect = 4.5e-18, Sum P(2) = 4.5e-18
Identities = 10/31 (32%), Positives = 14/31 (45%)
Query: 130 SLMNTAHSTDSSNLPPACDAWQNNASDFGLY 160
SL + S+ LP Q SD+GL+
Sbjct: 126 SLFGGSGSSQRYGLPVPRSQTQQQQSDYGLF 156
>UNIPROTKB|Q6DLS1 [details] [associations]
symbol:SCL1 "SCARECROW-like protein" species:3708 "Brassica
napus" [GO:0005515 "protein binding" evidence=IPI] Pfam:PF03514
GO:GO:0006355 GO:GO:0006351 InterPro:IPR005202 PROSITE:PS50985
EMBL:AY664405 IntAct:Q6DLS1 Uniprot:Q6DLS1
Length = 461
Score = 215 (80.7 bits), Expect = 1.4e-14, P = 1.4e-14
Identities = 91/374 (24%), Positives = 157/374 (41%)
Query: 258 LIDCACLVESEPDKAVKSLVRLRGSVCAHGNPTERVAYYFTEALYKRLTQRAEKSITTLE 317
++DC E V S + R A G P +R A+YF EAL LT + +
Sbjct: 106 VVDCIESDELHLAHVVLSQLNQRLQTSA-GRPLQRAAFYFKEALGSLLTGTNRNQLFSW- 163
Query: 318 ANCEDCILSFKTLNDACPYSKFAYLTANQAILEATENASH---IHIVDFGIVQGIQWSFL 374
++ I + K + P F++ TANQAIL++ + S +H+VDF I G Q++ L
Sbjct: 164 SDIVQKIRAIKEFSGISPIPLFSHFTANQAILDSLSSQSSSPFVHVVDFEIGFGGQYASL 223
Query: 375 LQALANRPTGKPVKVRISGIPAPALGKSPAASLLATGDRLREFAGSLSLNLEFEPILIP- 433
++ +A + +R++ + A + A + L +FA + + + E +L+
Sbjct: 224 MREIAEKSANGGF-LRVTAVVA----EDCAVETRLVKENLTQFAAEMKIRFQIEFVLMKT 278
Query: 434 --IRKLRASSFRVDPNEALVVNFMLQLNSLLDDNRLAVENALQMAKSLNPIVVTLAEYEA 491
I +A F VD +V+ ++ + + + + ++P VV + E
Sbjct: 279 FEILSFKAIRF-VDGERTVVL-----ISPAIFRRVIGIAEFVNNLGRVSPNVVVFVDSEG 332
Query: 492 NLNRTG---FLARFKNALKYYTAVFESLEPNMTTDSDERFQVERQILGPRIANLLAPEKQ 548
G F F +A ++YT V ESL+ + VE +L P+I+ A +
Sbjct: 333 CTETAGSGSFRREFVSAFEFYTMVLESLDAAAPPGDLVKKIVETFLLRPKIS---AAVET 389
Query: 549 GAKRERVEDIENWRIFMENSDFEGIPFSHYALSQAEILLWNYNYSPLFTLNQSHDNLLTL 608
A R + WR + + + S +A QAE LL + + L L
Sbjct: 390 AANRRSAGQM-TWREMLCAAGMRPVQLSQFADFQAECLLEKAQVRGFHVAKRQGE--LVL 446
Query: 609 SWKKVPLLTVSSWR 622
W L+ S+WR
Sbjct: 447 CWHGRALVATSAWR 460
>TAIR|locus:2115340 [details] [associations]
symbol:HAM4 "AT4G36710" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0030154 "cell differentiation" evidence=IMP]
[GO:0048831 "regulation of shoot system development" evidence=IGI]
Pfam:PF03514 GO:GO:0005634 GO:GO:0030154 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0003700 GO:GO:0006351 GO:GO:0048831
EMBL:AL161589 EMBL:Z99708 InterPro:IPR005202 PROSITE:PS50985
EMBL:AK118497 IPI:IPI00538111 PIR:E85433 RefSeq:NP_195389.4
UniGene:At.31304 PaxDb:O23210 PRIDE:O23210 DNASU:829824
EnsemblPlants:AT4G36710.1 GeneID:829824 KEGG:ath:AT4G36710
GeneFarm:4264 TAIR:At4g36710 eggNOG:NOG271584 HOGENOM:HOG000090733
InParanoid:O23210 OMA:ELVLCWH ProtClustDB:CLSN2717261
Genevestigator:O23210 Uniprot:O23210
Length = 486
Score = 214 (80.4 bits), Expect = 2.1e-14, P = 2.1e-14
Identities = 97/376 (25%), Positives = 158/376 (42%)
Query: 258 LIDCACLVESEPDKAVKSLV--RLRGSVCAHGNPTERVAYYFTEALYKRLTQRAEKSITT 315
++DC E + + V S + RLR G P +R A+YF EAL LT I
Sbjct: 129 VVDCVESDELQLAQVVLSRLNQRLRSPA---GRPLQRAAFYFKEALGSFLTGSNRNPIRL 185
Query: 316 LE-ANCEDCILSFKTLNDACPYSKFAYLTANQAILEATENASH---IHIVDFGIVQGIQW 371
+ I + K + P F++ TANQAIL++ + S +H+VDF I G Q+
Sbjct: 186 SSWSEIVQRIRAIKEYSGISPIPLFSHFTANQAILDSLSSQSSSPFVHVVDFEIGFGGQY 245
Query: 372 SFLLQALANRPTGKPVKVRISGIPAPALGKSPAASLLATGDRLREFAGSLSLNLEFEPIL 431
+ L++ + + +R++ + A + A + L +FA + + + E +L
Sbjct: 246 ASLMREITEKSVSGGF-LRVTAVVA----EECAVETRLVKENLTQFAAEMKIRFQIEFVL 300
Query: 432 IP-IRKLRASSFRVDPNEALVVNFMLQLNSLLDDNRLA-VENALQMAKSLNPIVVTLAEY 489
+ L + R E VV L S RL+ + + + + ++P VV +
Sbjct: 301 MKTFEMLSFKAIRFVEGERTVV-----LISPAIFRRLSGITDFVNNLRRVSPKVVVFVDS 355
Query: 490 EANLNRTG---FLARFKNALKYYTAVFESLEPNMTTDSDERFQVERQILGPRIANLLAPE 546
E G F F +AL++YT V ESL+ + VE +L P+I+ A
Sbjct: 356 EGWTEIAGSGSFRREFVSALEFYTMVLESLDAAAPPGDLVKKIVEAFVLRPKIS---AAV 412
Query: 547 KQGAKRERVEDIENWRIFMENSDFEGIPFSHYALSQAEILLWNYNYSPLFTLNQSHDNLL 606
+ A R ++ WR + I S +A QAE LL + + L
Sbjct: 413 ETAADRRHTGEM-TWREAFCAAGMRPIQLSQFADFQAECLLEKAQVRGFHVAKRQGE--L 469
Query: 607 TLSWKKVPLLTVSSWR 622
L W L+ S+WR
Sbjct: 470 VLCWHGRALVATSAWR 485
>TAIR|locus:2087994 [details] [associations]
symbol:AT3G13840 "AT3G13840" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] Pfam:PF03514 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0003700 GO:GO:0006351 EMBL:AB028610
InterPro:IPR005202 PROSITE:PS50985 IPI:IPI00544801
RefSeq:NP_188000.1 UniGene:At.64114 PaxDb:Q9LRW3 PRIDE:Q9LRW3
EnsemblPlants:AT3G13840.1 GeneID:820596 KEGG:ath:AT3G13840
GeneFarm:4262 TAIR:At3g13840 eggNOG:NOG262645 HOGENOM:HOG000240132
InParanoid:Q9LRW3 OMA:WFAFPNN PhylomeDB:Q9LRW3
ProtClustDB:CLSN2684819 Genevestigator:Q9LRW3 Uniprot:Q9LRW3
Length = 510
Score = 186 (70.5 bits), Expect = 3.0e-11, P = 3.0e-11
Identities = 102/401 (25%), Positives = 164/401 (40%)
Query: 240 STSTGFAEAELAQPLTKALIDCACLVESEPDKAVKS-LVRLRGSVCAHGNPTERVAYYFT 298
S+ G E A+ K L CA + + V+ L L + G+ R+A +
Sbjct: 134 SSKDGNKEGRWAE---KLLNPCALAITASNSSRVQHYLCVLSELASSSGDANRRLAAFGL 190
Query: 299 EALYKRLTQRAEKS----ITTLEANCEDCILSFKTL---NDACPYSKFAYLTANQAILEA 351
AL L+ + S + T A+ E + KTL + P+ AN AIL+
Sbjct: 191 RALQHHLSSSSVSSSFWPVFTF-ASAEVKMFQ-KTLLKFYEVSPWFALPNNMANSAILQI 248
Query: 352 T----ENASHIHIVDFGIVQGIQWSFLLQALANRPTGKPVKVRISGIP--APALGKSPAA 405
++ +HI+D G+ G+QW LL+AL+ R G P +VRI+ I + S
Sbjct: 249 LAQDPKDKKDLHIIDIGVSHGMQWPTLLEALSCRLEGPPPRVRITVISDLTADIPFSVGP 308
Query: 406 SLLATGDRLREFAGSLSLNLEFEPILIPIRKLRASSFRVDPNEALVVNFMLQLNSL---L 462
G +L FA SL +NL+ +L ++ + S P+E L+V +L+ L +
Sbjct: 309 PGYNYGSQLLGFARSLKINLQIS-VLDKLQLIDTS-----PHENLIVCAQFRLHHLKHSI 362
Query: 463 DDNRLAVENALQMAKSLNPIVVTLAEYEANLNRTG-FLARFKNALKYYTAVFESLEPNMT 521
+D R L+ +SL P V L E + + F A F L+Y +S
Sbjct: 363 NDER---GETLKAVRSLRPKGVVLCENNGECSSSADFAAGFSKKLEYVWKFLDSTSSGFK 419
Query: 522 TDSDERFQVERQILGPRIANLLAPEKQGAKRERVEDIENWRIFMENSDFEGIPFSHYALS 581
++ E ER+++ +L G + E E W M + F F A+
Sbjct: 420 EENSE----ERKLMEGEATKVLM--NAG---DMNEGKEKWYERMREAGFFVEAFEEDAVD 470
Query: 582 QAEILLWNYNYSPLFTLNQSHDNLLTLSWKKVPLLTVSSWR 622
A+ LL Y+ + + D L WK + S W+
Sbjct: 471 GAKSLLRKYDNNWEIRMEDG-DTFAGLMWKGEAVSFCSLWK 510
>TAIR|locus:1009023400 [details] [associations]
symbol:AT5G67411 "AT5G67411" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] Pfam:PF03514 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0006355 GO:GO:0006351 EMBL:AB007645
InterPro:IPR005202 PROSITE:PS50985 EMBL:DQ487622 IPI:IPI00657013
RefSeq:NP_001032167.1 UniGene:At.65711 EnsemblPlants:AT5G67411.1
GeneID:3771574 KEGG:ath:AT5G67411 TAIR:At5g67411 eggNOG:NOG309215
PhylomeDB:Q2V2T9 Genevestigator:Q2V2T9 Uniprot:Q2V2T9
Length = 202
Score = 150 (57.9 bits), Expect = 8.9e-10, P = 8.9e-10
Identities = 57/198 (28%), Positives = 101/198 (51%)
Query: 374 LLQALANRPTGKPVKV-RISGIPAPALGKSP---AASLLATGDRLREFAGSLSLNLEFEP 429
L+ ++AN+ KP + +++ I + A P S G +L FA + ++ +EF
Sbjct: 6 LIDSMANKLHKKPPPLLKLTVIASDAEFHPPPLLGISYEELGSKLVNFATTRNVAMEFRI 65
Query: 430 ILIPIRKLRAS---SFRVDP---NEALVVNFMLQLNSLLDDNRLAVENA----LQMAKSL 479
I +S R+DP NEALVVN + L+ + D+ + N L+ + L
Sbjct: 66 ISSSYSDGLSSLIEQLRIDPFVFNEALVVNCHMMLHYIPDE--ILTSNLRSVFLKELRDL 123
Query: 480 NPIVVTLAEYEANLNRTGFLARFKNALKYYTAVFESLEPNMTTDSDERFQVERQILGPRI 539
NP +VTL + +++ T F++R ++ Y +++ E +T S++R E I +I
Sbjct: 124 NPTIVTLIDEDSDFTSTNFISRLRSLYNYMWIPYDTAEMFLTRGSEQRQWYEADISW-KI 182
Query: 540 ANLLAPEKQGAKR-ERVE 556
N++A K+GA+R ER+E
Sbjct: 183 DNVVA--KEGAERVERLE 198
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.133 0.397 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 622 520 0.00089 119 3 11 22 0.40 34
35 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 33
No. of states in DFA: 627 (67 KB)
Total size of DFA: 310 KB (2158 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 39.95u 0.08s 40.03t Elapsed: 00:00:02
Total cpu time: 39.95u 0.08s 40.03t Elapsed: 00:00:02
Start: Sat May 11 08:57:38 2013 End: Sat May 11 08:57:40 2013