Query 006987
Match_columns 622
No_of_seqs 150 out of 215
Neff 4.1
Searched_HMMs 46136
Date Thu Mar 28 17:20:12 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/006987.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/006987hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG2769 Putative u4/u6 small n 100.0 2E-128 3E-133 1026.2 32.9 425 132-621 94-522 (522)
2 PF08572 PRP3: pre-mRNA proces 100.0 2.4E-72 5.2E-77 557.9 20.2 221 236-467 1-223 (223)
3 PF06544 DUF1115: Protein of u 100.0 4.1E-42 8.9E-47 314.3 11.1 128 489-616 1-128 (128)
4 PF04940 BLUF: Sensors of blue 94.4 0.076 1.7E-06 47.1 5.2 66 507-591 27-92 (93)
5 PRK14432 acylphosphatase; Prov 69.0 5.4 0.00012 35.6 3.4 45 502-546 17-63 (93)
6 PRK14436 acylphosphatase; Prov 68.0 5.4 0.00012 35.4 3.2 46 501-546 18-64 (91)
7 PRK14421 acylphosphatase; Prov 67.8 5.7 0.00012 36.1 3.3 44 502-545 19-63 (99)
8 PRK14452 acylphosphatase; Prov 66.7 5.9 0.00013 36.5 3.2 48 500-547 33-81 (107)
9 PRK14420 acylphosphatase; Prov 66.6 6.4 0.00014 34.6 3.3 46 502-547 17-63 (91)
10 PRK14441 acylphosphatase; Prov 65.8 6.7 0.00015 34.9 3.3 44 502-545 20-64 (93)
11 PRK14424 acylphosphatase; Prov 65.3 6.7 0.00015 35.2 3.2 45 501-545 21-66 (94)
12 PRK10363 cpxP periplasmic repr 65.2 33 0.00071 34.3 8.2 77 379-471 45-130 (166)
13 PRK10455 periplasmic protein; 65.1 32 0.00069 33.8 8.1 75 381-471 53-136 (161)
14 PRK14430 acylphosphatase; Prov 64.6 6.9 0.00015 34.9 3.2 43 502-544 19-62 (92)
15 PRK14445 acylphosphatase; Prov 64.4 8.1 0.00018 34.2 3.5 44 502-545 19-63 (91)
16 PRK14427 acylphosphatase; Prov 64.3 7.3 0.00016 34.8 3.3 46 501-546 20-66 (94)
17 PF00708 Acylphosphatase: Acyl 63.9 7 0.00015 34.0 3.0 52 499-550 16-68 (91)
18 PRK14449 acylphosphatase; Prov 63.5 7.6 0.00016 34.3 3.2 45 502-546 18-63 (90)
19 PRK14429 acylphosphatase; Prov 62.3 8.3 0.00018 34.0 3.2 46 502-547 17-63 (90)
20 PRK14440 acylphosphatase; Prov 61.9 8.4 0.00018 34.2 3.2 44 502-545 18-62 (90)
21 PRK14435 acylphosphatase; Prov 61.2 8.3 0.00018 34.1 3.0 44 502-545 17-61 (90)
22 PRK14437 acylphosphatase; Prov 60.7 8.4 0.00018 35.5 3.1 48 498-545 34-82 (109)
23 PRK14426 acylphosphatase; Prov 60.6 8.7 0.00019 34.1 3.1 45 501-545 18-63 (92)
24 PRK14448 acylphosphatase; Prov 60.2 8.9 0.00019 33.9 3.0 44 502-545 17-61 (90)
25 PRK14433 acylphosphatase; Prov 59.6 10 0.00022 33.5 3.3 44 502-545 16-60 (87)
26 PRK14442 acylphosphatase; Prov 59.0 11 0.00023 33.5 3.4 44 502-545 19-63 (91)
27 PRK12751 cpxP periplasmic stre 58.8 48 0.001 32.7 8.1 80 380-471 52-136 (162)
28 PRK14438 acylphosphatase; Prov 58.1 11 0.00023 33.5 3.1 44 502-545 18-62 (91)
29 PRK14423 acylphosphatase; Prov 57.8 11 0.00023 33.5 3.2 46 502-547 20-66 (92)
30 PRK14422 acylphosphatase; Prov 57.7 11 0.00025 33.5 3.3 46 501-546 20-66 (93)
31 PF13801 Metal_resist: Heavy-m 57.6 67 0.0015 27.7 8.1 79 382-471 39-124 (125)
32 PRK14450 acylphosphatase; Prov 57.2 11 0.00024 33.3 3.1 44 502-545 17-62 (91)
33 PRK14451 acylphosphatase; Prov 57.0 11 0.00025 33.2 3.2 45 502-546 18-63 (89)
34 PRK14425 acylphosphatase; Prov 55.6 12 0.00026 33.4 3.1 44 502-545 21-65 (94)
35 PRK14443 acylphosphatase; Prov 55.3 13 0.00029 33.3 3.4 45 502-546 19-64 (93)
36 PRK14446 acylphosphatase; Prov 54.5 15 0.00033 32.6 3.5 43 503-545 18-61 (88)
37 PF08690 GET2: GET complex sub 53.1 11 0.00024 40.5 2.9 26 385-410 2-32 (302)
38 PRK14444 acylphosphatase; Prov 50.1 18 0.00039 32.1 3.3 46 502-547 19-65 (92)
39 PRK14431 acylphosphatase; Prov 48.1 25 0.00054 31.2 3.8 45 502-546 17-61 (89)
40 PRK14439 acylphosphatase; Prov 48.0 18 0.0004 35.9 3.3 45 502-546 90-135 (163)
41 PRK14434 acylphosphatase; Prov 47.9 19 0.00041 32.1 3.1 45 502-546 17-64 (92)
42 PRK14428 acylphosphatase; Prov 47.3 20 0.00043 32.5 3.2 45 501-545 22-67 (97)
43 COG1254 AcyP Acylphosphatases 46.4 21 0.00046 32.1 3.2 49 497-545 14-63 (92)
44 PRK14447 acylphosphatase; Prov 45.3 27 0.00058 31.3 3.7 44 502-545 19-64 (95)
45 KOG3360 Acylphosphatase [Energ 37.3 67 0.0015 29.6 4.9 68 508-590 29-97 (98)
46 PRK12750 cpxP periplasmic repr 28.5 2.4E+02 0.0052 28.0 7.6 17 381-397 49-65 (170)
47 PHA00431 internal virion prote 27.9 50 0.0011 39.0 3.1 75 421-511 38-115 (746)
48 COG5154 BRX1 RNA-binding prote 24.7 64 0.0014 33.7 2.9 40 430-469 231-270 (283)
49 KOG2879 Predicted E3 ubiquitin 24.2 80 0.0017 34.1 3.6 11 40-50 229-239 (298)
50 PF12396 DUF3659: Protein of u 22.4 49 0.0011 28.1 1.3 19 185-203 38-56 (64)
51 TIGR00985 3a0801s04tom mitocho 20.7 2.2E+02 0.0048 28.0 5.6 19 434-452 79-97 (148)
52 PF07462 MSP1_C: Merozoite sur 20.5 1.5E+02 0.0033 34.7 5.1 21 56-76 237-257 (574)
No 1
>KOG2769 consensus Putative u4/u6 small nuclear ribonucleoprotein [RNA processing and modification]
Probab=100.00 E-value=1.5e-128 Score=1026.22 Aligned_cols=425 Identities=50% Similarity=0.749 Sum_probs=375.4
Q ss_pred ccccHHHHHHHHHHHHHhcCCCCCCCccccccCCCCCCCCCcC--CCCCCCCCceEecCCC--CccccCCCeeeccCCCc
Q 006987 132 NITNIEAVKRAQELAAKMGFRQDPEFAPIINCFPGQPPVDAAV--PQKPTKAPVLRVDALG--REIDEHGNVVNRTKPSN 207 (622)
Q Consensus 132 ~~~~~~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~--~~~~~kp~~L~lD~~G--R~ID~~G~vI~~~kp~~ 207 (622)
+....++++|++.|+.. ++++..+.+..+ +..|+++..|+-|+.| |.||+.|++|. ++|..
T Consensus 94 s~~~~~~~~r~~~L~~~--------------~~~~~~t~~~~~~~a~~~tkg~~l~~~~le~~r~i~e~~~~i~-t~~~~ 158 (522)
T KOG2769|consen 94 SKQILEAVKRPQELAQN--------------IQNSIRTPDMPISKAIKQTKGAVLRQDALEKKRKIDELGNVID-TKPSN 158 (522)
T ss_pred hHHHHHHHhhhhhhccc--------------cccccCCcccchhhhhcccccceeehhhhhhhhhHhhhcchhh-ccccc
Confidence 45667899999998665 223333444455 6789999999999999 99999999999 78888
Q ss_pred ccchhhhhhhhhhhHHHhcCCCcCCCCCCCCCCCCCCCCCcccccCCCccceeeccCchhHHHHHHHHHHhhhchHhHHH
Q 006987 208 LSTLKVNINKQKKDAFQILKPELEVDPNVNPHFDPRMGINKSKLLRPKRMTFQFVEEGKWSKEAEILRVKSQFGEAGAKE 287 (622)
Q Consensus 208 ~sTLKaNir~~k~e~f~~~k~~~~~~~~~npyfD~r~~~~~~k~~R~kR~~f~F~ekGKy~kqAe~lR~k~qlee~~~ee 287 (622)
.|+|..|++ ++ ... ...| +|++|+||++|+|++.|++.|.++++ ++
T Consensus 159 ~~~li~n~d-------------------------~~-~~~--~~~r-~rr~f~f~e~gkf~~~an~~r~~a~l-----e~ 204 (522)
T KOG2769|consen 159 LSGLIPNLD-------------------------PR-TKK--PRKR-GRRTFLFHESGKFIKLANRHRYKAQL-----ER 204 (522)
T ss_pred ccccccccC-------------------------hh-hcc--chhc-cccceeecccchHHHHHHHHHHHHHH-----HH
Confidence 888877654 33 111 2234 45699999999999999999987766 68
Q ss_pred HHHHHHHHHHhcCCCCCCcchhHHHhhhhccCCCCCCCCccccccccccCCCCCCCCCcccchhhhhccccccceeeCCC
Q 006987 288 RQAKQAQLAKAKGGTDINPNLIEVAERVITKEKPKDPIPEIEWWDAPLLLTGSYADISDDVTIEDKLKREKITIYVEHPR 367 (622)
Q Consensus 288 lk~~~a~~akak~~~~i~~~l~ei~e~~~~k~~~~~~iP~VEWWD~~iL~~~~y~~i~~~~~~~~~i~~~~It~yVEHPv 367 (622)
|+.++++++++. ||++ ++.++...+ .++||+|||||..||+.+.|.+.+ ...+....||+|||||+
T Consensus 205 Lq~eis~~a~k~---gI~~-~~~la~~~p-----~~~iP~iEwwD~~il~~~d~~dEn-----~~~i~~~~it~~IeHP~ 270 (522)
T KOG2769|consen 205 LQNEISQAARKT---GIST-ATKLALIAP-----KDDIPAIEWWDSNILTNDDTIDEN-----HLKIDQSIITNLIEHPI 270 (522)
T ss_pred HHHHHHHHHHhc---CCch-hhhhhhccC-----CCCCchhhhhcccccccCCccccc-----chhhhHHHHHHHhcCCc
Confidence 999999998853 5766 667777654 389999999999999987443321 23333578999999999
Q ss_pred CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhhhhhhhccccCCCChHHHHHHHH
Q 006987 368 PIEPPAEPAPPPPQPLKLTKKEQKKLRTQRRLAREKDRQEMIRQGLIEPPKPKVKMSNLMKVLGSEATQDPTRLEKEIRS 447 (622)
Q Consensus 368 pi~pp~e~~~p~~~plyLTKKEqKKLRRqrR~e~~KEkQdKIRLGL~PPPpPKVKLSNLMrVLg~eAV~DPTkvEa~VR~ 447 (622)
||.||.++..|+++|+|||||||||||||||+|++||+|+||||||+|||+|||||||||+|||+|||||||+||++||.
T Consensus 271 ~~~PP~e~~~p~~l~vyLTKKErKKLRRQ~R~ea~KEkqekIrLGL~~ppePKVKiSNLMrVLgsEAiqDPTK~E~~VR~ 350 (522)
T KOG2769|consen 271 PMLPPAENLTPVSLPVYLTKKERKKLRRQRRKEARKEKQEKIRLGLEPPPEPKVKLSNLMRVLGSEAIQDPTKLEAEVRD 350 (522)
T ss_pred ccCCCcccCCCCccceeecHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCcchHHHHHHHhhhccccCcHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhccCCHHHHHHHHHhhhcCCCCCCceEEEEEEEcCCCCCccccccccccccccceeEEEEcCCceE
Q 006987 448 AAAEREQAHIDRNIARKLTPAERREKKERKLFDDPSSVETIVSVYKINDLSHPKTRFKVDVNAHENRLTGCAVICEGINV 527 (622)
Q Consensus 448 QmeeR~~~He~~NeeRKLT~EqRreKk~~Kl~eD~~~~gv~vaVyrI~~LsnP~hrFKV~~NAqQl~LTG~cli~~~~nl 527 (622)
||++|+++||++|++||||+||||+|+.+|+.+|++ .||||+||+|++|+||++||||++||+||+||||||++.++|+
T Consensus 351 Q~aeR~kaHe~~N~aRKLT~~qkreKk~rKl~ED~s-t~v~~~V~r~K~l~~p~~rFKve~NAkql~ltG~~vl~~d~~v 429 (522)
T KOG2769|consen 351 QMAERQKAHEDENAARKLTPEQKREKKERKLFEDPS-TGVHCSVYRIKNLQNPKKRFKVEMNAKQLQLTGVCVLHRDMNV 429 (522)
T ss_pred HHHHHHHHhhhhhhhhcCCHHHHHHHHHhhhccCCC-ceEEEEEEEEecccCCccceeeeechhhhceeeeEEEecCCcE
Confidence 999999999999999999999999999999999985 7999999999999999999999999999999999999999999
Q ss_pred EEEecchhHHHHHHHHHhhhcCCCccCcccCcCccccCCCCCCeeEEEEeeecCCCCCCCeeeEecCCHHHHHHHHHhcC
Q 006987 528 VVVEGGSKSIKRYGKLMLRRIDWAKAVKEEDEDEDETTDKPVNKCVLVWQGNVARPSFNRFFVHECMTEAAAKKVFADAG 607 (622)
Q Consensus 528 VVVEGG~KsiKkYkkLMl~RIkW~e~~~~~d~~~~e~~d~~~N~C~LVWEG~vk~r~F~~w~~k~c~te~~Are~L~~~~ 607 (622)
||||||+||||||+||||+||||+|++... .++|++.+..+|+|+|||||++.+|+|++|+|+.|+||.+||+||++||
T Consensus 430 vVvEGg~Ka~KkykrLMl~RIkW~e~~~~k-~d~~~e~~~~~N~C~lvWEG~~~rr~F~~~~~k~c~~e~~Ar~~f~k~g 508 (522)
T KOG2769|consen 430 VVVEGGPKAQKKYKRLMLKRIKWEEDFELK-KDEDEEAVNGGNKCVLVWEGTVQRRSFREFKFKECPTEKMAREFFEKHG 508 (522)
T ss_pred EEEecCHHHHHHHHHHHHhhcCchhhhhhc-ccchhhccCCCceEEEEeeccccCCcccceeEEecCcHHHHHHHHHHcc
Confidence 999999999999999999999999996322 2556677889999999999999999999999999999999999999999
Q ss_pred chhHHHHHhcccCC
Q 006987 608 VAHYWDLAVNFNDE 621 (622)
Q Consensus 608 vehYWDlA~~~~~~ 621 (622)
|+||||||+||+..
T Consensus 509 veHyWdLa~s~s~~ 522 (522)
T KOG2769|consen 509 VEHYWDLAYSYSVL 522 (522)
T ss_pred hHHHHHHHhhccCC
Confidence 99999999999863
No 2
>PF08572 PRP3: pre-mRNA processing factor 3 (PRP3); InterPro: IPR013881 Pre-mRNA processing factor 3 (PRP3) is a U4/U6-associated splicing factor. The human PRP3 has been implicated in autosomal retinitis pigmentosa [].
Probab=100.00 E-value=2.4e-72 Score=557.89 Aligned_cols=221 Identities=49% Similarity=0.805 Sum_probs=185.0
Q ss_pred CCCCCCCCCCCCcccccCCCccceeeccCchhHHHHHHHHHHhhhchHhHHHHHHHHHHHHHhcCCCCCCcchhHHHhhh
Q 006987 236 VNPHFDPRMGINKSKLLRPKRMTFQFVEEGKWSKEAEILRVKSQFGEAGAKERQAKQAQLAKAKGGTDINPNLIEVAERV 315 (622)
Q Consensus 236 ~npyfD~r~~~~~~k~~R~kR~~f~F~ekGKy~kqAe~lR~k~qlee~~~eelk~~~a~~akak~~~~i~~~l~ei~e~~ 315 (622)
+||||||++... +..++++++|+||++|+|+++|+++|.+++++ +++.++++.++.. ++.++ ..+.+..
T Consensus 1 ~npy~d~~~~~~--~~~~r~~r~l~F~e~Gk~~~~a~~~R~~~~~e-----~~~~~~~~~~~~~---g~~~~-~~~~~~~ 69 (223)
T PF08572_consen 1 ENPYFDPRLKKS--KPKKRKRRALKFHEKGKFIKQAEQLRRKAQLE-----ELKKEIAEEARKA---GIQSA-EKLAEKI 69 (223)
T ss_pred CCCCcCCccccc--ccccCCCCCceecCcchHHHHHHHHHHHHHHH-----HHHHHHHHHHHHc---CCchh-hHHHHhh
Confidence 599999999822 23455567999999999999999999988764 4555565555533 34332 2344555
Q ss_pred hccCCCCCCCCccccccccccCCCCCCCCCcccchhhhhccccccceeeCCCCCCCCCCCCCCCC--CCCCCCHHHHHHH
Q 006987 316 ITKEKPKDPIPEIEWWDAPLLLTGSYADISDDVTIEDKLKREKITIYVEHPRPIEPPAEPAPPPP--QPLKLTKKEQKKL 393 (622)
Q Consensus 316 ~~k~~~~~~iP~VEWWD~~iL~~~~y~~i~~~~~~~~~i~~~~It~yVEHPvpi~pp~e~~~p~~--~plyLTKKEqKKL 393 (622)
+..+...++||+|||||.+||++++|++++++.....+..+..||+||||||||++|.+...+.+ +||||||||||||
T Consensus 70 ~~~~~~~~~iPdiEWWD~~~l~~~~y~~~~~~~~~~~~~~~~~It~~VeHPv~i~~p~~~~~~~~~~~~~~LTkkErKKl 149 (223)
T PF08572_consen 70 PKRELPEDEIPDIEWWDRPILPDPSYDDLNDESDLEIDEEESSITNYVEHPVPIKPPYEKNKPPPVVPPVYLTKKERKKL 149 (223)
T ss_pred cccccccccCCCccccchhhcCCCCccccccccchhcccchhhhhhhhhCCCCCCCccccccccccccCcccChHHHHHH
Confidence 55555668999999999999999999988765322222246789999999999999999665554 9999999999999
Q ss_pred HHHHHHHHHHHHHHHHHcCCCCCCCccchhhhhhhhhccccCCCChHHHHHHHHHHHHHHHHHHHHHHhccCCH
Q 006987 394 RTQRRLAREKDRQEMIRQGLIEPPKPKVKMSNLMKVLGSEATQDPTRLEKEIRSAAAEREQAHIDRNIARKLTP 467 (622)
Q Consensus 394 RRqrR~e~~KEkQdKIRLGL~PPPpPKVKLSNLMrVLg~eAV~DPTkvEa~VR~QmeeR~~~He~~NeeRKLT~ 467 (622)
|||+|+++++|+||||||||+|||+|||||||||||||++||+|||+||++||+||++|+++|+++|++||||+
T Consensus 150 Rr~rR~e~~kEkq~kIrlGL~ppP~PKVKlSNLMrVL~~eAV~DPT~vE~~Vr~Q~eeR~~~He~~N~~RkLt~ 223 (223)
T PF08572_consen 150 RRQRRQEKQKEKQDKIRLGLEPPPPPKVKLSNLMRVLGNEAVQDPTKVEAKVRKQMEERQQKHEERNEERKLTP 223 (223)
T ss_pred HHHHHHHHHHHHHHHHHcCCCCCCCCcccHHHHHHHhhcchhcCcHHHHHHHHHHHHHHHHHHHHHHHHcccCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999996
No 3
>PF06544 DUF1115: Protein of unknown function (DUF1115); InterPro: IPR010541 This entry represents the C terminus of several eukaryotic RWD domain-containing proteins of unknown function.
Probab=100.00 E-value=4.1e-42 Score=314.35 Aligned_cols=128 Identities=44% Similarity=0.755 Sum_probs=117.7
Q ss_pred EEEEEEcCCCCCccccccccccccccceeEEEEcCCceEEEEecchhHHHHHHHHHhhhcCCCccCcccCcCccccCCCC
Q 006987 489 VSVYKINDLSHPKTRFKVDVNAHENRLTGCAVICEGINVVVVEGGSKSIKRYGKLMLRRIDWAKAVKEEDEDEDETTDKP 568 (622)
Q Consensus 489 vaVyrI~~LsnP~hrFKV~~NAqQl~LTG~cli~~~~nlVVVEGG~KsiKkYkkLMl~RIkW~e~~~~~d~~~~e~~d~~ 568 (622)
|+||+|++|+||+|||||+.||+||+|||||++++++||||||||++||++|++||++||+|+|+....+.++++..+..
T Consensus 1 ~~~~~I~~L~~p~~R~kI~~nA~ql~LtG~~~~g~~pgiIvvEG~~k~i~~y~~lmlrri~W~e~~~~~~~~~e~~~~~~ 80 (128)
T PF06544_consen 1 CYVHHIKSLSNPKKRFKIDKNAKQLHLTGFCLPGPKPGIIVVEGGEKSIKEYKKLMLRRIKWNEPKKITVREEEDEEDDS 80 (128)
T ss_pred CEEEEeCcccCHHHHHHHHHHHHHhCCeEEEEEcCCcEEEEEECCHHHHHHHHHHHhceecccccccccccccccccccc
Confidence 68999999999999999999999999999999999999999999999999999999999999987654433333333347
Q ss_pred CCeeEEEEeeecCCCCCCCeeeEecCCHHHHHHHHHhcCchhHHHHHh
Q 006987 569 VNKCVLVWQGNVARPSFNRFFVHECMTEAAAKKVFADAGVAHYWDLAV 616 (622)
Q Consensus 569 ~N~C~LVWEG~vk~r~F~~w~~k~c~te~~Are~L~~~~vehYWDlA~ 616 (622)
+|+|.+||||++..++|++|+++.|.|+.+|+++|+++|++||||+|+
T Consensus 81 ~n~c~~vweg~~~~r~F~~~~~~~~~~~~~~~~~L~~~~~~~~~~~a~ 128 (128)
T PF06544_consen 81 DNSCSLVWEGTVKKRAFKGFREKECEDESEARKFLREHGLEHYFDLAL 128 (128)
T ss_pred CCceeEEEeccccccCCCCceEEeCCCHHHHHHHHHHCCCHHHHHhhC
Confidence 999999999999999999999999999999999999999999999985
No 4
>PF04940 BLUF: Sensors of blue-light using FAD; InterPro: IPR007024 An FAD-binding domain, BLUF, exemplified by the N terminus of the AppA protein, (Q53119 from SWISSPROT), from Rhodobacter sphaeroides, is present in various proteins, primarily from Bacteria. The BLUF domain is involved in sensing blue-light (and possibly redox) using FAD and is similar to the flavin-binding PAS domains and cryptochromes. The predicted secondary structure reveals that the BLUF domain is a novel FAD-binding fold [].; PDB: 2IYG_A 2IYI_B 1X0P_A 2HFN_G 3MZI_A 2HFO_E 3GFZ_A 3GG1_B 2KB2_A 3GFY_A ....
Probab=94.37 E-value=0.076 Score=47.07 Aligned_cols=66 Identities=18% Similarity=0.331 Sum_probs=52.9
Q ss_pred ccccccccceeEEEEcCCceEEEEecchhHHHHHHHHHhhhcCCCccCcccCcCccccCCCCCCeeEEEEeeecCCCCCC
Q 006987 507 DVNAHENRLTGCAVICEGINVVVVEGGSKSIKRYGKLMLRRIDWAKAVKEEDEDEDETTDKPVNKCVLVWQGNVARPSFN 586 (622)
Q Consensus 507 ~~NAqQl~LTG~cli~~~~nlVVVEGG~KsiKkYkkLMl~RIkW~e~~~~~d~~~~e~~d~~~N~C~LVWEG~vk~r~F~ 586 (622)
..|-.++++||+-+++.+.-+=|+||.+.++.. +..||.=+. .-..|..+-.|++..|.|.
T Consensus 27 ~~~N~~~~iTG~Ll~~~~~F~Q~LEG~~~~v~~----l~~rI~~D~---------------RH~~v~~l~~~~i~~R~F~ 87 (93)
T PF04940_consen 27 RRNNRRHGITGFLLYDGGHFFQVLEGPEEAVDA----LFERIKQDP---------------RHSNVVVLFRGPIEERRFP 87 (93)
T ss_dssp HHHHHHHTEEEEEEEETTEEEEEEEEEHHHHHH----HHHHHHT-T---------------TEEEEEEEEEEEESS-SST
T ss_pred HHhhhhcCCEEEEEEeCCEEEEEEECCHHHHHH----HHHHHhcCC---------------CcCCeEEEEeeecCCccCC
Confidence 346678999999999999999999999999986 336664322 2347999999999999999
Q ss_pred CeeeE
Q 006987 587 RFFVH 591 (622)
Q Consensus 587 ~w~~k 591 (622)
+|.|.
T Consensus 88 ~W~M~ 92 (93)
T PF04940_consen 88 DWSMG 92 (93)
T ss_dssp SCSSE
T ss_pred CCcCC
Confidence 99986
No 5
>PRK14432 acylphosphatase; Provisional
Probab=69.01 E-value=5.4 Score=35.61 Aligned_cols=45 Identities=22% Similarity=0.343 Sum_probs=35.5
Q ss_pred cccccccccccccceeEEE-EcCCceEEEEe-cchhHHHHHHHHHhh
Q 006987 502 TRFKVDVNAHENRLTGCAV-ICEGINVVVVE-GGSKSIKRYGKLMLR 546 (622)
Q Consensus 502 hrFKV~~NAqQl~LTG~cl-i~~~~nlVVVE-GG~KsiKkYkkLMl~ 546 (622)
-|+-+..-|++++|+|-|. +.++-=-|+++ |.+.++..|.+.+.+
T Consensus 17 FR~~v~~~A~~lgl~G~V~N~~dG~Vei~~~~G~~~~v~~f~~~l~~ 63 (93)
T PRK14432 17 FRFFTEQIANNMKLKGFVKNLNDGRVEIVAFFNTKEQMKKFEKLLKN 63 (93)
T ss_pred ehHHHHHHHHHhCCEEEEEECCCCCEEEEEEECCHHHHHHHHHHHHh
Confidence 4667788899999999885 55654467777 999999999886654
No 6
>PRK14436 acylphosphatase; Provisional
Probab=67.97 E-value=5.4 Score=35.39 Aligned_cols=46 Identities=15% Similarity=0.211 Sum_probs=37.7
Q ss_pred ccccccccccccccceeEEE-EcCCceEEEEecchhHHHHHHHHHhh
Q 006987 501 KTRFKVDVNAHENRLTGCAV-ICEGINVVVVEGGSKSIKRYGKLMLR 546 (622)
Q Consensus 501 ~hrFKV~~NAqQl~LTG~cl-i~~~~nlVVVEGG~KsiKkYkkLMl~ 546 (622)
-.|+-+..-|.+++|+|.|. +.++-=-|+++|.+.++..|.+++.+
T Consensus 18 GFR~~v~~~A~~l~l~G~V~N~~dG~Vei~~qG~~~~i~~f~~~l~~ 64 (91)
T PRK14436 18 GFRWSMQREARKLGVNGWVRNLPDGSVEAVLEGDEERVEALIGWAHQ 64 (91)
T ss_pred CcHHHHHHHHHHcCCEEEEEECCCCcEEEEEEcCHHHHHHHHHHHhh
Confidence 35778888999999999885 55664578889999999999997754
No 7
>PRK14421 acylphosphatase; Provisional
Probab=67.81 E-value=5.7 Score=36.06 Aligned_cols=44 Identities=16% Similarity=0.049 Sum_probs=36.5
Q ss_pred cccccccccccccceeEEE-EcCCceEEEEecchhHHHHHHHHHh
Q 006987 502 TRFKVDVNAHENRLTGCAV-ICEGINVVVVEGGSKSIKRYGKLML 545 (622)
Q Consensus 502 hrFKV~~NAqQl~LTG~cl-i~~~~nlVVVEGG~KsiKkYkkLMl 545 (622)
-|+=|...|.+++|+|.|. +.++-=-|+|+|.+.++..|.+.+.
T Consensus 19 FR~fv~~~A~~lgL~G~V~N~~dG~Vei~~~G~~~~i~~f~~~l~ 63 (99)
T PRK14421 19 YRAWVARTAEALGLEGWVRNRRDGSVEALFAGPADAVAEMIARCR 63 (99)
T ss_pred chHHHHHHHHHhCCEEEEEECCCCEEEEEEeCCHHHHHHHHHHHH
Confidence 5677888999999999885 5556457889999999999888774
No 8
>PRK14452 acylphosphatase; Provisional
Probab=66.70 E-value=5.9 Score=36.48 Aligned_cols=48 Identities=19% Similarity=0.130 Sum_probs=38.9
Q ss_pred CccccccccccccccceeEEE-EcCCceEEEEecchhHHHHHHHHHhhh
Q 006987 500 PKTRFKVDVNAHENRLTGCAV-ICEGINVVVVEGGSKSIKRYGKLMLRR 547 (622)
Q Consensus 500 P~hrFKV~~NAqQl~LTG~cl-i~~~~nlVVVEGG~KsiKkYkkLMl~R 547 (622)
=--|+-+...|.+++|+|-|. ..++-=-|+++|.+.++..|.+++.+-
T Consensus 33 VGFR~~v~~~A~~lgL~G~V~N~~dGsVeI~~qG~~~~ve~F~~~l~~g 81 (107)
T PRK14452 33 VGFRASCCRRALDLGLSGWVRNLSDGSVEVQAEGPPLALSELRAWCERG 81 (107)
T ss_pred cChhHHHHHHHHHhCCEEEEEECCCCCEEEEEEcCHHHHHHHHHHHhcC
Confidence 346888999999999999885 555545788899999999997777553
No 9
>PRK14420 acylphosphatase; Provisional
Probab=66.59 E-value=6.4 Score=34.62 Aligned_cols=46 Identities=20% Similarity=0.317 Sum_probs=37.8
Q ss_pred cccccccccccccceeEEE-EcCCceEEEEecchhHHHHHHHHHhhh
Q 006987 502 TRFKVDVNAHENRLTGCAV-ICEGINVVVVEGGSKSIKRYGKLMLRR 547 (622)
Q Consensus 502 hrFKV~~NAqQl~LTG~cl-i~~~~nlVVVEGG~KsiKkYkkLMl~R 547 (622)
-|+-+...|.+++|+|.|- ..++-=-|+++|.+.++..|.+.+..-
T Consensus 17 FR~~~~~~A~~~gl~G~V~N~~dG~Vei~~qG~~~~i~~f~~~l~~~ 63 (91)
T PRK14420 17 FRYFVQMEADKRKLTGWVKNRDDGTVEIEAEGPEEALQLFLDAIEKG 63 (91)
T ss_pred ChHHHHHHHHHcCCEEEEEECCCCcEEEEEEECHHHHHHHHHHHHhC
Confidence 4677888999999999985 445545899999999999998888653
No 10
>PRK14441 acylphosphatase; Provisional
Probab=65.85 E-value=6.7 Score=34.90 Aligned_cols=44 Identities=14% Similarity=0.083 Sum_probs=36.2
Q ss_pred cccccccccccccceeEEE-EcCCceEEEEecchhHHHHHHHHHh
Q 006987 502 TRFKVDVNAHENRLTGCAV-ICEGINVVVVEGGSKSIKRYGKLML 545 (622)
Q Consensus 502 hrFKV~~NAqQl~LTG~cl-i~~~~nlVVVEGG~KsiKkYkkLMl 545 (622)
-|+-+...|.+++|+|-|- ..++-=.|+++|.+.++..|..++.
T Consensus 20 FR~~v~~~A~~lgL~G~V~N~~dG~Vei~~qG~~~~i~~f~~~l~ 64 (93)
T PRK14441 20 FRQSAADEARRLGVEGWVRNLPDGRVEAEAEGERAAVGALVRWCH 64 (93)
T ss_pred chHHHHHHHhhcCcEEEEEECCCCEEEEEEEECHHHHHHHHHHHh
Confidence 5777888999999999875 5555457889999999999888874
No 11
>PRK14424 acylphosphatase; Provisional
Probab=65.28 E-value=6.7 Score=35.20 Aligned_cols=45 Identities=20% Similarity=0.237 Sum_probs=38.2
Q ss_pred ccccccccccccccceeEEE-EcCCceEEEEecchhHHHHHHHHHh
Q 006987 501 KTRFKVDVNAHENRLTGCAV-ICEGINVVVVEGGSKSIKRYGKLML 545 (622)
Q Consensus 501 ~hrFKV~~NAqQl~LTG~cl-i~~~~nlVVVEGG~KsiKkYkkLMl 545 (622)
-.|+-|...|.+++|+|.|- +.++-=-|+++|.+.++..|.+.+.
T Consensus 21 GFR~~v~~~A~~~gl~G~V~N~~dG~Vei~~qG~~~~v~~f~~~l~ 66 (94)
T PRK14424 21 GFRHATVREAHALGLRGWVANLEDGTVEAMIQGPAAQIDRMLAWLR 66 (94)
T ss_pred chHHHHHHHHHHcCCeEEEEECCCCCEEEEEEECHHHHHHHHHHHH
Confidence 46788889999999999885 5556568999999999999988884
No 12
>PRK10363 cpxP periplasmic repressor CpxP; Reviewed
Probab=65.18 E-value=33 Score=34.26 Aligned_cols=77 Identities=21% Similarity=0.336 Sum_probs=47.5
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhhhhhhhccccCCCChHHHHHHHHHHHHHHHHHHH
Q 006987 379 PPQPLKLTKKEQKKLRTQRRLAREKDRQEMIRQGLIEPPKPKVKMSNLMKVLGSEATQDPTRLEKEIRSAAAEREQAHID 458 (622)
Q Consensus 379 ~~~plyLTKKEqKKLRRqrR~e~~KEkQdKIRLGL~PPPpPKVKLSNLMrVLg~eAV~DPTkvEa~VR~QmeeR~~~He~ 458 (622)
....|-||...|..+|...++.+.. .|++ .---..-|-.++..+.+ =|+.||.++++..++|.+
T Consensus 45 MF~gLdLTdaQRqQmRdLm~~~r~~----------~~~~-~~~er~amh~LI~ad~F-----DEaavra~a~kma~~~~e 108 (166)
T PRK10363 45 MFDGISLTEHQRQQMRDLMQQARHE----------QPPV-NVSEMETMHRLVTAENF-----DENAVRAQAEKMAQEQVA 108 (166)
T ss_pred cccCCCCCHHHHHHHHHHHHHHHhc----------cccc-CHHHHHHHHHHHhcCCC-----CHHHHHHHHHHHHHHHHH
Confidence 3467999998888888776555431 1111 11123334456665554 367777777777776666
Q ss_pred HHHhc---------cCCHHHHH
Q 006987 459 RNIAR---------KLTPAERR 471 (622)
Q Consensus 459 ~NeeR---------KLT~EqRr 471 (622)
+-.+| =|||||+.
T Consensus 109 ~~Vem~k~~nqmy~lLTPEQKa 130 (166)
T PRK10363 109 RQVEMAKVRNQMYRLLTPEQQA 130 (166)
T ss_pred HHHHHHHHHHHHHHhCCHHHHH
Confidence 65554 49999974
No 13
>PRK10455 periplasmic protein; Reviewed
Probab=65.05 E-value=32 Score=33.80 Aligned_cols=75 Identities=20% Similarity=0.402 Sum_probs=40.8
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhhhhhhhccccCCCChHHHHHHHHHHHHHHHHHHHHH
Q 006987 381 QPLKLTKKEQKKLRTQRRLAREKDRQEMIRQGLIEPPKPKVKMSNLMKVLGSEATQDPTRLEKEIRSAAAEREQAHIDRN 460 (622)
Q Consensus 381 ~plyLTKKEqKKLRRqrR~e~~KEkQdKIRLGL~PPPpPKVKLSNLMrVLg~eAV~DPTkvEa~VR~QmeeR~~~He~~N 460 (622)
..|-||...|.++|...+..+..-++ | -+--...|+.++..+.+ | |+.||.++++..+.|.++=
T Consensus 53 ~~L~LT~~Qrqqir~im~~~r~~~~~----------~-~~~~r~~l~~li~ad~F-D----eaavra~~~k~~~~~~~~~ 116 (161)
T PRK10455 53 KGLNLTDAQKQQIRDIMKAQRDQMKR----------P-PLEERRAMHDIIASDTF-D----KAKAEAQITKMEAQRKARM 116 (161)
T ss_pred hhCCCCHHHHHHHHHHHHHHHHhhcc----------c-cHHHHHHHHHHHccCcc-C----HHHHHHHHHHHHHHHHHHH
Confidence 45899999999999766654433211 0 11122345555555432 3 5555555554333333222
Q ss_pred Hh---------ccCCHHHHH
Q 006987 461 IA---------RKLTPAERR 471 (622)
Q Consensus 461 ee---------RKLT~EqRr 471 (622)
.+ --||||||.
T Consensus 117 ~~~~~~~~qiy~vLTPEQr~ 136 (161)
T PRK10455 117 LAHMETQNKIYNVLTPEQKK 136 (161)
T ss_pred HHHHHHHHHHHHhCCHHHHH
Confidence 22 269999985
No 14
>PRK14430 acylphosphatase; Provisional
Probab=64.60 E-value=6.9 Score=34.86 Aligned_cols=43 Identities=19% Similarity=0.201 Sum_probs=36.7
Q ss_pred cccccccccccccceeEEE-EcCCceEEEEecchhHHHHHHHHH
Q 006987 502 TRFKVDVNAHENRLTGCAV-ICEGINVVVVEGGSKSIKRYGKLM 544 (622)
Q Consensus 502 hrFKV~~NAqQl~LTG~cl-i~~~~nlVVVEGG~KsiKkYkkLM 544 (622)
.|+-+...|++++|+|.|. +.++-=-|+++|.+.++..|...+
T Consensus 19 FR~~~~~~A~~lgl~G~VrN~~dGsVei~~qG~~~~i~~f~~~l 62 (92)
T PRK14430 19 YRAACADAADDLGLGGWVRNRADGTVEVMASGTVRQLEALRAWM 62 (92)
T ss_pred eHHHHHHHHHHhCCEEEEEECCCCcEEEEEEcCHHHHHHHHHHH
Confidence 5788889999999999985 556646799999999999988877
No 15
>PRK14445 acylphosphatase; Provisional
Probab=64.43 E-value=8.1 Score=34.16 Aligned_cols=44 Identities=25% Similarity=0.237 Sum_probs=36.7
Q ss_pred cccccccccccccceeEEE-EcCCceEEEEecchhHHHHHHHHHh
Q 006987 502 TRFKVDVNAHENRLTGCAV-ICEGINVVVVEGGSKSIKRYGKLML 545 (622)
Q Consensus 502 hrFKV~~NAqQl~LTG~cl-i~~~~nlVVVEGG~KsiKkYkkLMl 545 (622)
-|+-+..-|.+++|+|.|- ..++-=-|+++|.+.++..|...+.
T Consensus 19 FR~~v~~~A~~~gl~G~V~N~~dG~Vei~~qG~~~~l~~f~~~l~ 63 (91)
T PRK14445 19 FRMFIDRAASELNLSGWVRNLPDGTVEIEAQGSSGMIDELIKQAE 63 (91)
T ss_pred ChHHHHHHHhhCCCEEEEEECCCCeEEEEEEECHHHHHHHHHHHH
Confidence 5777888999999999885 5566457889999999999988884
No 16
>PRK14427 acylphosphatase; Provisional
Probab=64.30 E-value=7.3 Score=34.77 Aligned_cols=46 Identities=22% Similarity=0.256 Sum_probs=37.8
Q ss_pred ccccccccccccccceeEEE-EcCCceEEEEecchhHHHHHHHHHhh
Q 006987 501 KTRFKVDVNAHENRLTGCAV-ICEGINVVVVEGGSKSIKRYGKLMLR 546 (622)
Q Consensus 501 ~hrFKV~~NAqQl~LTG~cl-i~~~~nlVVVEGG~KsiKkYkkLMl~ 546 (622)
-.|+=|...|.+++|+|.|. +.++-=-|+++|.+.++..|...+..
T Consensus 20 GFR~fv~~~A~~lgl~G~V~N~~dGsVei~~qG~~~~i~~f~~~l~~ 66 (94)
T PRK14427 20 GFRYWTMRKAEELGLTGTVRNLDDGSVALVAEGTGEQVEKLLDWLNS 66 (94)
T ss_pred CChHHHHHHHHHcCCEEEEEECCCCeEEEEEEECHHHHHHHHHHHhh
Confidence 35778889999999999885 55554578899999999999888765
No 17
>PF00708 Acylphosphatase: Acylphosphatase; InterPro: IPR001792 Acylphosphatase (3.6.1.7 from EC) is an enzyme of approximately 98 amino acid residues that specifically catalyses the hydrolysis of the carboxyl-phosphate bond of acylphosphates [], its substrates including 1,3-diphosphoglycerate and carbamyl phosphate []. The enzyme has a mainly beta-sheet structure with 2 short alpha-helical segments. It is distributed in a tissue-specific manner in a wide variety of species, although its physiological role is as yet unknown []: it may, however, play a part in the regulation of the glycolytic pathway and pyrimidine biosynthesis []. There are two known isozymes. One seems to be specific to muscular tissues, the other, called 'organ-common type', is found in many different tissues. While bacterial and archebacterial hypothetical proteins that are highly similar to that enzyme and that probably possess the same activity. These proteins include: Escherichia coli putative acylphosphatase (3.6.1.7 from EC) (acylphosphate phosphohydrolase) (gene yccX). Bacillus subtilis putative acylphosphatase (3.6.1.7 from EC) (acylphosphate phosphohydrolase) (gene yflL). Archaeoglobus fulgidus putative acylphosphatase (3.6.1.7 from EC) (acylphosphate phosphohydrolase) (O29440 from SWISSPROT). An acylphosphatase-like domain is also found in some prokaryotic hydrogenase maturation HypF carbamoyltransferases [, ].; PDB: 1APS_A 1GXT_A 1GXU_A 2HLT_A 2FHM_A 2HLU_A 3BR8_A 1ULR_A 3TRG_A 2BJD_A ....
Probab=63.86 E-value=7 Score=34.00 Aligned_cols=52 Identities=19% Similarity=0.115 Sum_probs=40.1
Q ss_pred CCccccccccccccccceeEEE-EcCCceEEEEecchhHHHHHHHHHhhhcCC
Q 006987 499 HPKTRFKVDVNAHENRLTGCAV-ICEGINVVVVEGGSKSIKRYGKLMLRRIDW 550 (622)
Q Consensus 499 nP~hrFKV~~NAqQl~LTG~cl-i~~~~nlVVVEGG~KsiKkYkkLMl~RIkW 550 (622)
-=-.|+-|..-|++++|+|.|- ..++---|+++|.+..+..|.+.+..--.+
T Consensus 16 GVgFR~~v~~~A~~~gl~G~V~N~~dg~V~i~~~G~~~~l~~f~~~l~~g~p~ 68 (91)
T PF00708_consen 16 GVGFRPFVKRIARKLGLTGWVRNLPDGSVEIEAEGEEEQLEEFIKWLKKGPPP 68 (91)
T ss_dssp SSSHHHHHHHHHHHTT-EEEEEE-TTSEEEEEEEEEHHHHHHHHHHHHHSSTT
T ss_pred cCChhHHHHHHHHHhCCceEEEECCCCEEEEEEEeCHHHHHHHHHHHHhCCCC
Confidence 3346777888899999999885 556657899999999999999988874333
No 18
>PRK14449 acylphosphatase; Provisional
Probab=63.46 E-value=7.6 Score=34.28 Aligned_cols=45 Identities=29% Similarity=0.359 Sum_probs=37.7
Q ss_pred cccccccccccccceeEEE-EcCCceEEEEecchhHHHHHHHHHhh
Q 006987 502 TRFKVDVNAHENRLTGCAV-ICEGINVVVVEGGSKSIKRYGKLMLR 546 (622)
Q Consensus 502 hrFKV~~NAqQl~LTG~cl-i~~~~nlVVVEGG~KsiKkYkkLMl~ 546 (622)
-|+-|...|.+++|+|.|. +.++-=.|+++|.+.++..|.+.+..
T Consensus 18 FR~fv~~~A~~lgl~G~V~N~~dG~Vei~~~G~~~~v~~f~~~l~~ 63 (90)
T PRK14449 18 LRYSVYQKAVSLGITGYAENLYDGSVEVVAEGDEENIKELINFIKT 63 (90)
T ss_pred hHHHHHHHHHHcCCEEEEEECCCCeEEEEEEeCHHHHHHHHHHHhh
Confidence 5777888999999999885 55565689999999999999888854
No 19
>PRK14429 acylphosphatase; Provisional
Probab=62.28 E-value=8.3 Score=34.02 Aligned_cols=46 Identities=13% Similarity=0.093 Sum_probs=37.7
Q ss_pred cccccccccccccceeEEE-EcCCceEEEEecchhHHHHHHHHHhhh
Q 006987 502 TRFKVDVNAHENRLTGCAV-ICEGINVVVVEGGSKSIKRYGKLMLRR 547 (622)
Q Consensus 502 hrFKV~~NAqQl~LTG~cl-i~~~~nlVVVEGG~KsiKkYkkLMl~R 547 (622)
-|+-+..-|++++|+|.|. +.++-=.|+++|.+.++..|...+.+.
T Consensus 17 FR~~v~~~A~~~gl~G~V~N~~dG~Vei~~qG~~~~i~~f~~~l~~g 63 (90)
T PRK14429 17 CRRATLTKARALGVTGYVTNCEDGSVEILAQGSDPAVDNLIAWCEVG 63 (90)
T ss_pred eHHHHHHHHHHhCCEEEEEECCCCeEEEEEEeCHHHHHHHHHHHhhC
Confidence 3677778899999999885 555645788999999999999888654
No 20
>PRK14440 acylphosphatase; Provisional
Probab=61.92 E-value=8.4 Score=34.16 Aligned_cols=44 Identities=23% Similarity=0.230 Sum_probs=35.6
Q ss_pred cccccccccccccceeEEE-EcCCceEEEEecchhHHHHHHHHHh
Q 006987 502 TRFKVDVNAHENRLTGCAV-ICEGINVVVVEGGSKSIKRYGKLML 545 (622)
Q Consensus 502 hrFKV~~NAqQl~LTG~cl-i~~~~nlVVVEGG~KsiKkYkkLMl 545 (622)
-|+-+...|.+++|+|.|. +.++-=-|+++|.+.++..|.+.+.
T Consensus 18 FR~~v~~~A~~~gl~G~V~N~~dG~Vei~~~G~~~~v~~f~~~l~ 62 (90)
T PRK14440 18 FRKFVQIHAIRLGIKGYAKNLPDGSVEVVAEGYEEALSKLLERIK 62 (90)
T ss_pred chHHHHHHHHHcCCEEEEEECCCCCEEEEEEcCHHHHHHHHHHHh
Confidence 5777888999999999874 4555457889999999999887664
No 21
>PRK14435 acylphosphatase; Provisional
Probab=61.25 E-value=8.3 Score=34.13 Aligned_cols=44 Identities=16% Similarity=0.277 Sum_probs=36.5
Q ss_pred cccccccccccccceeEEE-EcCCceEEEEecchhHHHHHHHHHh
Q 006987 502 TRFKVDVNAHENRLTGCAV-ICEGINVVVVEGGSKSIKRYGKLML 545 (622)
Q Consensus 502 hrFKV~~NAqQl~LTG~cl-i~~~~nlVVVEGG~KsiKkYkkLMl 545 (622)
-|+-|...|.+++|+|.|. +.++-=-|+++|.+..+..|.+.+.
T Consensus 17 FR~~v~~~A~~~gl~G~V~N~~dG~Vei~~~G~~~~i~~f~~~l~ 61 (90)
T PRK14435 17 FRYFTRRVAKSLGVKGYVMNMDDGSVFIHAEGDENALRRFLNEVA 61 (90)
T ss_pred ChHHHHHHHHHhCCEEEEEECCCCCEEEEEEECHHHHHHHHHHHh
Confidence 5777888999999999886 4455457889999999999888774
No 22
>PRK14437 acylphosphatase; Provisional
Probab=60.75 E-value=8.4 Score=35.54 Aligned_cols=48 Identities=25% Similarity=0.171 Sum_probs=38.8
Q ss_pred CCCccccccccccccccceeEEE-EcCCceEEEEecchhHHHHHHHHHh
Q 006987 498 SHPKTRFKVDVNAHENRLTGCAV-ICEGINVVVVEGGSKSIKRYGKLML 545 (622)
Q Consensus 498 snP~hrFKV~~NAqQl~LTG~cl-i~~~~nlVVVEGG~KsiKkYkkLMl 545 (622)
.-=--|+=+...|++++|+|-|. +.++-=.|+|+|.+.++..|...+-
T Consensus 34 QGVGFR~fv~~~A~~lgL~G~V~N~~dG~Vei~~qG~~~~ie~f~~~L~ 82 (109)
T PRK14437 34 QGVFFRESVRKKAEELQLTGWVKNLSHGDVELVACGERDSIMILTEWLW 82 (109)
T ss_pred CCcCchHHHHHHHHHhCCeEEEEECCCCCEEEEEEECHHHHHHHHHHHH
Confidence 33456888999999999999885 5666467888999999999888773
No 23
>PRK14426 acylphosphatase; Provisional
Probab=60.60 E-value=8.7 Score=34.06 Aligned_cols=45 Identities=22% Similarity=0.275 Sum_probs=37.0
Q ss_pred ccccccccccccccceeEEE-EcCCceEEEEecchhHHHHHHHHHh
Q 006987 501 KTRFKVDVNAHENRLTGCAV-ICEGINVVVVEGGSKSIKRYGKLML 545 (622)
Q Consensus 501 ~hrFKV~~NAqQl~LTG~cl-i~~~~nlVVVEGG~KsiKkYkkLMl 545 (622)
--|+-+..-|.+++|+|.|. +.++-=-|+++|.+..+..|.+.+-
T Consensus 18 GFR~~v~~~A~~~gl~G~V~N~~dG~Vei~~~G~~~~i~~f~~~l~ 63 (92)
T PRK14426 18 GFRYHTQHEALKLGLTGYAKNLDDGSVEVVACGEEEQVEKLMEWLK 63 (92)
T ss_pred CchHHHHHHHHHhCCEEEEEECCCCcEEEEEEeCHHHHHHHHHHHh
Confidence 35788888999999999885 4555457889999999999988874
No 24
>PRK14448 acylphosphatase; Provisional
Probab=60.21 E-value=8.9 Score=33.94 Aligned_cols=44 Identities=18% Similarity=0.182 Sum_probs=36.7
Q ss_pred cccccccccccccceeEEE-EcCCceEEEEecchhHHHHHHHHHh
Q 006987 502 TRFKVDVNAHENRLTGCAV-ICEGINVVVVEGGSKSIKRYGKLML 545 (622)
Q Consensus 502 hrFKV~~NAqQl~LTG~cl-i~~~~nlVVVEGG~KsiKkYkkLMl 545 (622)
.|+-|...|.+++|+|.|. +.++-=-|+++|.+.++..|.+.+.
T Consensus 17 FR~~v~~~A~~lgl~G~V~N~~dG~Vei~~~G~~~~v~~f~~~l~ 61 (90)
T PRK14448 17 FRYFTWQEATKIGIKGYVKNRPDGSVEVVAVGSDAQIAAFRDWLQ 61 (90)
T ss_pred hHHHHHHHHHHhCCEEEEEECCCCCEEEEEEeCHHHHHHHHHHHH
Confidence 4777888999999999885 5555457899999999999988884
No 25
>PRK14433 acylphosphatase; Provisional
Probab=59.64 E-value=10 Score=33.46 Aligned_cols=44 Identities=30% Similarity=0.332 Sum_probs=35.8
Q ss_pred cccccccccccccceeEEE-EcCCceEEEEecchhHHHHHHHHHh
Q 006987 502 TRFKVDVNAHENRLTGCAV-ICEGINVVVVEGGSKSIKRYGKLML 545 (622)
Q Consensus 502 hrFKV~~NAqQl~LTG~cl-i~~~~nlVVVEGG~KsiKkYkkLMl 545 (622)
.|+=|-..|.+++|+|.|. +.++-=-|+++|.+.++..|.+.+.
T Consensus 16 FR~~v~~~A~~~~l~G~V~N~~dG~Vei~~~G~~~~i~~f~~~l~ 60 (87)
T PRK14433 16 YRAFVQKKARELGLSGYAENLSDGRVEVVAEGPKEALERLLHWLR 60 (87)
T ss_pred chHHHHHHHHHcCCEEEEEECCCCCEEEEEEECHHHHHHHHHHHh
Confidence 4666778899999999875 5556457889999999999988874
No 26
>PRK14442 acylphosphatase; Provisional
Probab=59.05 E-value=11 Score=33.50 Aligned_cols=44 Identities=23% Similarity=0.187 Sum_probs=36.5
Q ss_pred cccccccccccccceeEEE-EcCCceEEEEecchhHHHHHHHHHh
Q 006987 502 TRFKVDVNAHENRLTGCAV-ICEGINVVVVEGGSKSIKRYGKLML 545 (622)
Q Consensus 502 hrFKV~~NAqQl~LTG~cl-i~~~~nlVVVEGG~KsiKkYkkLMl 545 (622)
-|+=+..-|.+++|+|-|- +.++-=-|+++|.+.++..|.+++.
T Consensus 19 FR~~~~~~A~~~gl~G~V~N~~dG~Vei~~qG~~~~i~~f~~~l~ 63 (91)
T PRK14442 19 FRQATREEADRLELDGWVRNLDDGRVEVVWEGEEDRAKALERWLG 63 (91)
T ss_pred ccHHHHHHHHHcCCEEEEEECCCCCEEEEEEcCHHHHHHHHHHHh
Confidence 5677788899999999885 6666457888999999999988884
No 27
>PRK12751 cpxP periplasmic stress adaptor protein CpxP; Reviewed
Probab=58.83 E-value=48 Score=32.74 Aligned_cols=80 Identities=15% Similarity=0.248 Sum_probs=49.0
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhhhhhhhccccCCCChHHHHHHHHHHHHHHHHH---
Q 006987 380 PQPLKLTKKEQKKLRTQRRLAREKDRQEMIRQGLIEPPKPKVKMSNLMKVLGSEATQDPTRLEKEIRSAAAEREQAH--- 456 (622)
Q Consensus 380 ~~plyLTKKEqKKLRRqrR~e~~KEkQdKIRLGL~PPPpPKVKLSNLMrVLg~eAV~DPTkvEa~VR~QmeeR~~~H--- 456 (622)
...+-||...|..||...+..+... |.+. .--..-|-.++..+. =||.+|++.+.++.+.+...+
T Consensus 52 f~~l~LTd~QR~qmr~im~~~r~~~----------~~~~-~~~~~~m~~Li~Ad~-FDeaAvra~~~kma~~~~e~~v~~ 119 (162)
T PRK12751 52 FDGINLTEQQRQQMRDLMRQSHQSQ----------PRLD-LEDREAMHKLITADK-FDEAAVRAQAEKMSQNQIERHVEM 119 (162)
T ss_pred hccCCCCHHHHHHHHHHHHHhhhcc----------cchh-HHHHHHHHHHHhcCC-CCHHHHHHHHHHHHHHHHHHHHHH
Confidence 4568999999999998777665531 1110 111222445566655 599999888777655554333
Q ss_pred -HHHHHh-ccCCHHHHH
Q 006987 457 -IDRNIA-RKLTPAERR 471 (622)
Q Consensus 457 -e~~Nee-RKLT~EqRr 471 (622)
+.+|+- .-||||||.
T Consensus 120 ~~~~~qmy~lLTPEQra 136 (162)
T PRK12751 120 AKVRNQMYNLLTPEQKE 136 (162)
T ss_pred HHHHHHHHHcCCHHHHH
Confidence 333433 359999974
No 28
>PRK14438 acylphosphatase; Provisional
Probab=58.05 E-value=11 Score=33.49 Aligned_cols=44 Identities=14% Similarity=0.114 Sum_probs=35.3
Q ss_pred cccccccccccccceeEEE-EcCCceEEEEecchhHHHHHHHHHh
Q 006987 502 TRFKVDVNAHENRLTGCAV-ICEGINVVVVEGGSKSIKRYGKLML 545 (622)
Q Consensus 502 hrFKV~~NAqQl~LTG~cl-i~~~~nlVVVEGG~KsiKkYkkLMl 545 (622)
-|+=+...|.+++|+|-|- +.++-=.|+++|.+.++..|.+.+.
T Consensus 18 FR~~~~~~A~~~gl~G~V~N~~dG~Vei~~qG~~~~i~~f~~~l~ 62 (91)
T PRK14438 18 FRHHTQQTAQRLNVSGWVKNLPNGSVQGCFEGEETDVAALIDWCH 62 (91)
T ss_pred ccHHHHHHHHHcCCEEEEEECCCCEEEEEEEECHHHHHHHHHHHh
Confidence 4666778899999999885 5555457899999999999877763
No 29
>PRK14423 acylphosphatase; Provisional
Probab=57.79 E-value=11 Score=33.49 Aligned_cols=46 Identities=17% Similarity=0.142 Sum_probs=37.0
Q ss_pred cccccccccccccceeEEE-EcCCceEEEEecchhHHHHHHHHHhhh
Q 006987 502 TRFKVDVNAHENRLTGCAV-ICEGINVVVVEGGSKSIKRYGKLMLRR 547 (622)
Q Consensus 502 hrFKV~~NAqQl~LTG~cl-i~~~~nlVVVEGG~KsiKkYkkLMl~R 547 (622)
-|+=|...|++++|+|.+. +.++-=-|+++|.+.++..|...+.+.
T Consensus 20 FR~~v~~~A~~lgl~G~V~N~~dG~Vei~~~G~~~~i~~f~~~l~~g 66 (92)
T PRK14423 20 YRASTRDTARELGVDGWVRNLDDGRVEAVFEGPRDAVEAMVEWCHEG 66 (92)
T ss_pred ehHHHHHHHHHcCCEEEEEECCCCeEEEEEEECHHHHHHHHHHHHhC
Confidence 4677788899999999885 556644788999999999988877654
No 30
>PRK14422 acylphosphatase; Provisional
Probab=57.71 E-value=11 Score=33.49 Aligned_cols=46 Identities=28% Similarity=0.304 Sum_probs=38.0
Q ss_pred ccccccccccccccceeEEE-EcCCceEEEEecchhHHHHHHHHHhh
Q 006987 501 KTRFKVDVNAHENRLTGCAV-ICEGINVVVVEGGSKSIKRYGKLMLR 546 (622)
Q Consensus 501 ~hrFKV~~NAqQl~LTG~cl-i~~~~nlVVVEGG~KsiKkYkkLMl~ 546 (622)
-.|+=+..-|.+++|+|.|- +.++-=-|+++|.+.++..|.+.+..
T Consensus 20 GFR~~v~~~A~~~gl~G~V~N~~dG~Vei~~~G~~~~i~~f~~~l~~ 66 (93)
T PRK14422 20 GFRWWTRSRALELGLTGYAANLADGRVQVVAEGPRAACEKLLQLLRG 66 (93)
T ss_pred CcHHHHHHHHHHcCCEEEEEECCCCCEEEEEEcCHHHHHHHHHHHHh
Confidence 45778888999999999885 56664578899999999999888765
No 31
>PF13801 Metal_resist: Heavy-metal resistance; PDB: 3EPV_C 2Y3D_A 2Y3H_D 2Y3G_B 2Y3B_A 2Y39_A 3LAY_H.
Probab=57.57 E-value=67 Score=27.68 Aligned_cols=79 Identities=24% Similarity=0.268 Sum_probs=42.6
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHH--HHHHHHcCCCCCCCccchhhhhhhhhccccCCCChHHHHHHHHHHHH----HHHH
Q 006987 382 PLKLTKKEQKKLRTQRRLAREKD--RQEMIRQGLIEPPKPKVKMSNLMKVLGSEATQDPTRLEKEIRSAAAE----REQA 455 (622)
Q Consensus 382 plyLTKKEqKKLRRqrR~e~~KE--kQdKIRLGL~PPPpPKVKLSNLMrVLg~eAV~DPTkvEa~VR~Qmee----R~~~ 455 (622)
.+-||...+.++|...+....+- .+..++ .+-.-|...|..+ --||-++++.+++-.+. +...
T Consensus 39 ~l~Lt~eQ~~~l~~~~~~~~~~~~~~r~~~~----------~~r~~l~~ll~~~-~~D~~~i~a~~~~~~~~~~~l~~~~ 107 (125)
T PF13801_consen 39 MLNLTPEQQAKLRALMDEFRQEMRALRQELR----------AARQELRALLAAP-PPDEAAIEALLEEIREAQAELRQER 107 (125)
T ss_dssp HS-TTHHHHHHHHHHHHHHHHHHHHHHHHHH----------HHHHHHHHHHCCS-SS-HHHHHHHHHHHHHHHHHHHHHH
T ss_pred hcCCCHHHHHHHHHHHHHHHHHHHHHHHHHH----------HHHHHHHHHHcCC-CCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 36799999999997655443322 222222 2333455555554 45778887766554333 2333
Q ss_pred HHHHHHhc-cCCHHHHH
Q 006987 456 HIDRNIAR-KLTPAERR 471 (622)
Q Consensus 456 He~~NeeR-KLT~EqRr 471 (622)
++...+.+ -||||||.
T Consensus 108 ~~~~~~~~~~LtpeQR~ 124 (125)
T PF13801_consen 108 LEHLLEIRAVLTPEQRA 124 (125)
T ss_dssp HHHHHHHHHTT-GGGHH
T ss_pred HHHHHHHHHcCCHHHhC
Confidence 33344444 49999985
No 32
>PRK14450 acylphosphatase; Provisional
Probab=57.20 E-value=11 Score=33.27 Aligned_cols=44 Identities=27% Similarity=0.264 Sum_probs=35.0
Q ss_pred cccccccccccccceeEEE-EcCCc-eEEEEecchhHHHHHHHHHh
Q 006987 502 TRFKVDVNAHENRLTGCAV-ICEGI-NVVVVEGGSKSIKRYGKLML 545 (622)
Q Consensus 502 hrFKV~~NAqQl~LTG~cl-i~~~~-nlVVVEGG~KsiKkYkkLMl 545 (622)
.|+-+...|.+++|+|.|. +.++- =-|+++|.+.++..|...+.
T Consensus 17 FR~~v~~~A~~~~l~G~V~N~~dG~~Vei~~~G~~~~v~~f~~~l~ 62 (91)
T PRK14450 17 FRDFTRTQATRLGLCGYAKNLANGNEVEVVAEGDKDSLLEFLDLLR 62 (91)
T ss_pred cHHHHHHHHHHcCCEEEEEECCCCCEEEEEEEeCHHHHHHHHHHHh
Confidence 5677888899999999875 55552 35679999999999888773
No 33
>PRK14451 acylphosphatase; Provisional
Probab=56.98 E-value=11 Score=33.23 Aligned_cols=45 Identities=16% Similarity=0.210 Sum_probs=37.3
Q ss_pred cccccccccccccceeEEE-EcCCceEEEEecchhHHHHHHHHHhh
Q 006987 502 TRFKVDVNAHENRLTGCAV-ICEGINVVVVEGGSKSIKRYGKLMLR 546 (622)
Q Consensus 502 hrFKV~~NAqQl~LTG~cl-i~~~~nlVVVEGG~KsiKkYkkLMl~ 546 (622)
-|+-+...|.+++|+|-|- ..++-=-|+++|.+.++..|.+.+.+
T Consensus 18 FR~~~~~~A~~~gl~G~V~N~~dG~Vei~~qG~~~~i~~f~~~l~~ 63 (89)
T PRK14451 18 FRASAKKLAEQLMISGWARNLADGRVEVFACGKEDKLEEFYTWLQK 63 (89)
T ss_pred chHHHHHHHHHhCCEEEEEECCCCCEEEEEEECHHHHHHHHHHHhh
Confidence 5777888999999999885 56665578889999999998888853
No 34
>PRK14425 acylphosphatase; Provisional
Probab=55.64 E-value=12 Score=33.42 Aligned_cols=44 Identities=18% Similarity=0.102 Sum_probs=36.7
Q ss_pred cccccccccccccceeEEE-EcCCceEEEEecchhHHHHHHHHHh
Q 006987 502 TRFKVDVNAHENRLTGCAV-ICEGINVVVVEGGSKSIKRYGKLML 545 (622)
Q Consensus 502 hrFKV~~NAqQl~LTG~cl-i~~~~nlVVVEGG~KsiKkYkkLMl 545 (622)
-|+-+...|++++|+|-|. +.++-=-|+++|.+.++..|.+.+.
T Consensus 21 FR~~v~~~A~~~gl~G~V~N~~dGsVei~~qG~~~~le~f~~~l~ 65 (94)
T PRK14425 21 FRDWTRDEAERLGLTGWVRNESDGSVTALIAGPDSAISAMIERFR 65 (94)
T ss_pred chHHHHHHHHHhCCEEEEEECCCCeEEEEEEeCHHHHHHHHHHHh
Confidence 5788889999999999885 5666557889999999998887773
No 35
>PRK14443 acylphosphatase; Provisional
Probab=55.32 E-value=13 Score=33.33 Aligned_cols=45 Identities=9% Similarity=0.189 Sum_probs=37.6
Q ss_pred cccccccccccccceeEEE-EcCCceEEEEecchhHHHHHHHHHhh
Q 006987 502 TRFKVDVNAHENRLTGCAV-ICEGINVVVVEGGSKSIKRYGKLMLR 546 (622)
Q Consensus 502 hrFKV~~NAqQl~LTG~cl-i~~~~nlVVVEGG~KsiKkYkkLMl~ 546 (622)
-|+-+...|.+++|+|-|. +.++-=-|+++|.+..+..|.+.+..
T Consensus 19 FR~~~~~~A~~~gl~G~V~N~~dG~Vei~~qG~~~~l~~f~~~l~~ 64 (93)
T PRK14443 19 FRYTTKHVAYKYDISGTVKNLDDGSVEIHAIAEEENLNKFIDAIKK 64 (93)
T ss_pred CcHHHHHHHHHcCCEEEEEECCCCEEEEEEECCHHHHHHHHHHHhc
Confidence 5777888999999999885 66675678889999999999888854
No 36
>PRK14446 acylphosphatase; Provisional
Probab=54.46 E-value=15 Score=32.59 Aligned_cols=43 Identities=21% Similarity=0.219 Sum_probs=35.1
Q ss_pred ccccccccccccceeEEE-EcCCceEEEEecchhHHHHHHHHHh
Q 006987 503 RFKVDVNAHENRLTGCAV-ICEGINVVVVEGGSKSIKRYGKLML 545 (622)
Q Consensus 503 rFKV~~NAqQl~LTG~cl-i~~~~nlVVVEGG~KsiKkYkkLMl 545 (622)
|+=+...|++++|+|-|. ..++-=.|+++|.+.++..|-.++.
T Consensus 18 R~fv~~~A~~lgl~G~V~N~~dGsVei~~qG~~~~l~~f~~~l~ 61 (88)
T PRK14446 18 RASTRERAVALGLVGHARNQADGSVEVVAAGSAAALEALEAWLW 61 (88)
T ss_pred hHHHHHHHeeCCeEEEEEECCCCCEEEEEEeCHHHHHHHHHHHh
Confidence 566777899999999885 5566468889999999998877775
No 37
>PF08690 GET2: GET complex subunit GET2; InterPro: IPR014802 This family corresponds to the GET complex subunit GET2. The GET complex is involved in the retrieval of ER resident proteins from the Golgi []. ; PDB: 3SJD_D 3ZS9_C.
Probab=53.11 E-value=11 Score=40.50 Aligned_cols=26 Identities=38% Similarity=0.581 Sum_probs=20.2
Q ss_pred CCHHHHHHHHHHHHHHHHH-----HHHHHHH
Q 006987 385 LTKKEQKKLRTQRRLAREK-----DRQEMIR 410 (622)
Q Consensus 385 LTKKEqKKLRRqrR~e~~K-----EkQdKIR 410 (622)
||..|++||||.||++|-+ ++=+||-
T Consensus 2 ls~aEkrRLrRERReAKi~~GgaSaRLnKIT 32 (302)
T PF08690_consen 2 LSEAEKRRLRRERREAKIKAGGASARLNKIT 32 (302)
T ss_dssp --HHHHHHHHHHHHHHHHHCCCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHCCCcHHHHHHHh
Confidence 7899999999999999986 3556664
No 38
>PRK14444 acylphosphatase; Provisional
Probab=50.15 E-value=18 Score=32.14 Aligned_cols=46 Identities=17% Similarity=0.192 Sum_probs=37.3
Q ss_pred cccccccccccccceeEEE-EcCCceEEEEecchhHHHHHHHHHhhh
Q 006987 502 TRFKVDVNAHENRLTGCAV-ICEGINVVVVEGGSKSIKRYGKLMLRR 547 (622)
Q Consensus 502 hrFKV~~NAqQl~LTG~cl-i~~~~nlVVVEGG~KsiKkYkkLMl~R 547 (622)
-|+=+..-|++++|+|-|- +.++-=-|+++|.+..+..|...+.+.
T Consensus 19 FR~~v~~~A~~lgl~G~V~N~~dG~Vei~~qG~~~~i~~f~~~l~~g 65 (92)
T PRK14444 19 FRAYTRDRAREAGVKGWVRNLSDGRVEAVFEGSRPAVQKMISWCYSG 65 (92)
T ss_pred cHHHHHHHHHHhCCEEEEEECCCCcEEEEEEcCHHHHHHHHHHHHhC
Confidence 5667778899999999875 556645799999999999998886643
No 39
>PRK14431 acylphosphatase; Provisional
Probab=48.08 E-value=25 Score=31.19 Aligned_cols=45 Identities=11% Similarity=0.197 Sum_probs=35.4
Q ss_pred cccccccccccccceeEEEEcCCceEEEEecchhHHHHHHHHHhh
Q 006987 502 TRFKVDVNAHENRLTGCAVICEGINVVVVEGGSKSIKRYGKLMLR 546 (622)
Q Consensus 502 hrFKV~~NAqQl~LTG~cli~~~~nlVVVEGG~KsiKkYkkLMl~ 546 (622)
-|+=+..-|++++|+|-|.=.++-=.|+++|.+.++..|...+.+
T Consensus 17 FR~~~~~~A~~~gl~G~V~N~~dgVei~~qG~~~~l~~f~~~l~~ 61 (89)
T PRK14431 17 FRYFTQRIAMNYNIVGTVQNVDDYVEIYAQGDDADLERFIQGVIE 61 (89)
T ss_pred EhHHHHHHHhhcCCEEEEEECCCcEEEEEEcCHHHHHHHHHHHhc
Confidence 356677789999999988533443578899999999999887765
No 40
>PRK14439 acylphosphatase; Provisional
Probab=48.04 E-value=18 Score=35.87 Aligned_cols=45 Identities=22% Similarity=0.288 Sum_probs=38.1
Q ss_pred cccccccccccccceeEEE-EcCCceEEEEecchhHHHHHHHHHhh
Q 006987 502 TRFKVDVNAHENRLTGCAV-ICEGINVVVVEGGSKSIKRYGKLMLR 546 (622)
Q Consensus 502 hrFKV~~NAqQl~LTG~cl-i~~~~nlVVVEGG~KsiKkYkkLMl~ 546 (622)
.|+-|...|.|++|+|-|. +.++-=-|+++|.+.++..|.+.+.+
T Consensus 90 FR~fv~~~A~qlGLtGwVrNl~DGsVEI~aQG~ee~Ie~Fi~~L~~ 135 (163)
T PRK14439 90 FRYTTQYEAKKLGLTGYAKNLDDGSVEVVACGEEGQVEKLMQWLKS 135 (163)
T ss_pred chHHHHHHHHHhCCEEEEEECCCCCEEEEEEcCHHHHHHHHHHHhh
Confidence 5777888999999999884 56664578889999999999998875
No 41
>PRK14434 acylphosphatase; Provisional
Probab=47.89 E-value=19 Score=32.11 Aligned_cols=45 Identities=13% Similarity=0.156 Sum_probs=35.0
Q ss_pred ccccccccccccc-ceeEEE-EcCCceEEEEecch-hHHHHHHHHHhh
Q 006987 502 TRFKVDVNAHENR-LTGCAV-ICEGINVVVVEGGS-KSIKRYGKLMLR 546 (622)
Q Consensus 502 hrFKV~~NAqQl~-LTG~cl-i~~~~nlVVVEGG~-KsiKkYkkLMl~ 546 (622)
-|+-|...|++++ |+|-|. ..++-=.|+++|.+ .++..|-..+.+
T Consensus 17 FR~fv~~~A~~lg~l~G~V~N~~dGsVei~~qG~~~~~l~~f~~~l~~ 64 (92)
T PRK14434 17 FRYSVYSLALEIGDIYGRVWNNDDGTVEILAQSDDSAKLAKFIQEIRK 64 (92)
T ss_pred EhHHHHHHHHHcCCcEEEEEECCCCCEEEEEEcCCHHHHHHHHHHHhc
Confidence 3667788899999 999885 55564578889987 699988877754
No 42
>PRK14428 acylphosphatase; Provisional
Probab=47.35 E-value=20 Score=32.49 Aligned_cols=45 Identities=13% Similarity=0.153 Sum_probs=36.7
Q ss_pred ccccccccccccccceeEEE-EcCCceEEEEecchhHHHHHHHHHh
Q 006987 501 KTRFKVDVNAHENRLTGCAV-ICEGINVVVVEGGSKSIKRYGKLML 545 (622)
Q Consensus 501 ~hrFKV~~NAqQl~LTG~cl-i~~~~nlVVVEGG~KsiKkYkkLMl 545 (622)
--|+-+..-|++++|+|.|. ..++-=-|+++|.+.++..|-..+.
T Consensus 22 GFR~fv~~~A~~lgL~G~V~N~~dGsVei~~qG~~~~i~~fi~~l~ 67 (97)
T PRK14428 22 GFRYFTVTQARRLGVQGWVRNCRDGSVELEAQGSSDAVQALVEQLA 67 (97)
T ss_pred cchHHHHHHHHHcCCEEEEEECCCCEEEEEEEcCHHHHHHHHHHHh
Confidence 45777888999999999885 5566568889999999998877764
No 43
>COG1254 AcyP Acylphosphatases [Energy production and conversion]
Probab=46.41 E-value=21 Score=32.14 Aligned_cols=49 Identities=18% Similarity=0.238 Sum_probs=39.8
Q ss_pred CCCCccccccccccccccceeEEEEcC-CceEEEEecchhHHHHHHHHHh
Q 006987 497 LSHPKTRFKVDVNAHENRLTGCAVICE-GINVVVVEGGSKSIKRYGKLML 545 (622)
Q Consensus 497 LsnP~hrFKV~~NAqQl~LTG~cli~~-~~nlVVVEGG~KsiKkYkkLMl 545 (622)
...=-.|+-+..=|..|+|+|.+--.+ +-=-||++|-+.++.+|...+-
T Consensus 14 VQGVGFR~~~~~~A~~lgl~G~V~N~~DGsVeiva~G~~~~v~~~~~~l~ 63 (92)
T COG1254 14 VQGVGFRYFTRSEALRLGLTGWVKNLDDGSVEIVAEGPDEAVEKFIEWLR 63 (92)
T ss_pred eccccHHHHHHHHHHHCCCEEEEEECCCCeEEEEEEcCHHHHHHHHHHHH
Confidence 344456788888899999999997555 5557999999999999988887
No 44
>PRK14447 acylphosphatase; Provisional
Probab=45.32 E-value=27 Score=31.25 Aligned_cols=44 Identities=18% Similarity=0.179 Sum_probs=35.2
Q ss_pred cccccccccccccceeEEE-EcCC-ceEEEEecchhHHHHHHHHHh
Q 006987 502 TRFKVDVNAHENRLTGCAV-ICEG-INVVVVEGGSKSIKRYGKLML 545 (622)
Q Consensus 502 hrFKV~~NAqQl~LTG~cl-i~~~-~nlVVVEGG~KsiKkYkkLMl 545 (622)
.|+=+...|++++|+|.+- ..++ -=-|+++|.+.++..|-.++.
T Consensus 19 FR~~~~~~A~~~gl~G~V~N~~dG~~Vei~~qG~~~~l~~f~~~l~ 64 (95)
T PRK14447 19 FRQSMKEVANRNGVRGWVRNRSDGRTVEAVLEGPRDAVLKVIEWAR 64 (95)
T ss_pred chHHHHHHHhhcCeEEEEEECCCCCEEEEEEEeCHHHHHHHHHHHh
Confidence 5677888899999999885 4555 246778999999999888664
No 45
>KOG3360 consensus Acylphosphatase [Energy production and conversion]
Probab=37.34 E-value=67 Score=29.63 Aligned_cols=68 Identities=16% Similarity=0.224 Sum_probs=47.5
Q ss_pred cccccccceeEEEEcC-CceEEEEecchhHHHHHHHHHhhhcCCCccCcccCcCccccCCCCCCeeEEEEeeecCCCCCC
Q 006987 508 VNAHENRLTGCAVICE-GINVVVVEGGSKSIKRYGKLMLRRIDWAKAVKEEDEDEDETTDKPVNKCVLVWQGNVARPSFN 586 (622)
Q Consensus 508 ~NAqQl~LTG~cli~~-~~nlVVVEGG~KsiKkYkkLMl~RIkW~e~~~~~d~~~~e~~d~~~N~C~LVWEG~vk~r~F~ 586 (622)
.+|++|+|+|-|.=.. +-=-=-+||-+..+..++.+++.|=.= ...-.+|+.-=++++.+..|.
T Consensus 29 ~~a~~lGlrGWv~Nt~~GtvkG~leGp~~~vd~mk~wl~~~gsP---------------~s~I~~~ef~n~kei~~~~y~ 93 (98)
T KOG3360|consen 29 DEAKKLGLRGWVMNTSEGTVKGQLEGPPEKVDEMKEWLLTRGSP---------------VSAIDRAEFSNQKEISRYTYK 93 (98)
T ss_pred HHHHhhcceEEEEecCCceEEEEEeCCHHHHHHHHHHHHhcCCh---------------hHheeeeeecccceecccccc
Confidence 4899999999996544 443446899999999999999977111 111234554455677777777
Q ss_pred Ceee
Q 006987 587 RFFV 590 (622)
Q Consensus 587 ~w~~ 590 (622)
.|.+
T Consensus 94 ~F~I 97 (98)
T KOG3360|consen 94 DFSI 97 (98)
T ss_pred eeee
Confidence 7764
No 46
>PRK12750 cpxP periplasmic repressor CpxP; Reviewed
Probab=28.54 E-value=2.4e+02 Score=27.96 Aligned_cols=17 Identities=29% Similarity=0.561 Sum_probs=12.7
Q ss_pred CCCCCCHHHHHHHHHHH
Q 006987 381 QPLKLTKKEQKKLRTQR 397 (622)
Q Consensus 381 ~plyLTKKEqKKLRRqr 397 (622)
..|-||...+.+||..+
T Consensus 49 ~~L~LTdeQk~qik~i~ 65 (170)
T PRK12750 49 RQLDLTDAQKEQLKEMR 65 (170)
T ss_pred hhCCCCHHHHHHHHHHH
Confidence 45889988888876544
No 47
>PHA00431 internal virion protein C
Probab=27.92 E-value=50 Score=39.03 Aligned_cols=75 Identities=32% Similarity=0.402 Sum_probs=41.8
Q ss_pred chhhhhhhhhccccCCCChHHHHHHHHHHH--HHHHHHHHHHH-hccCCHHHHHHHHHhhhcCCCCCCceEEEEEEEcCC
Q 006987 421 VKMSNLMKVLGSEATQDPTRLEKEIRSAAA--EREQAHIDRNI-ARKLTPAERREKKERKLFDDPSSVETIVSVYKINDL 497 (622)
Q Consensus 421 VKLSNLMrVLg~eAV~DPTkvEa~VR~Qme--eR~~~He~~Ne-eRKLT~EqRreKk~~Kl~eD~~~~gv~vaVyrI~~L 497 (622)
|+=|||..-|+.=+-.- ...-.+.. .+.++.|+-|+ -|||||||||+-.. | | +.+|-=+.-
T Consensus 38 ~~~s~ll~sl~~f~~aG-----~~ay~~y~~~~k~~AdERSNEIIRKLTPEQrReAi~-----n----G--TLLYQDDPY 101 (746)
T PHA00431 38 VGQSNLLESLGKFAKAG-----ADAYGAYDERRKDKADERSNEIIRKLTPEQRREAIK-----N----G--TLLYQDDPY 101 (746)
T ss_pred cCCchHHHHHHHHHHHh-----HHHHHHHHHHHHHhHhhhHHHHHHhcCHHHHHHHHh-----c----C--ceeecCCHH
Confidence 66677776665421100 00112222 34456777776 59999999987532 1 2 445554444
Q ss_pred CCCccccccccccc
Q 006987 498 SHPKTRFKVDVNAH 511 (622)
Q Consensus 498 snP~hrFKV~~NAq 511 (622)
.=-..|||...||-
T Consensus 102 AMeALr~KtGRnaA 115 (746)
T PHA00431 102 AMEALRFKTGRNAA 115 (746)
T ss_pred HHHHHHHHhccchh
Confidence 44456788777763
No 48
>COG5154 BRX1 RNA-binding protein required for 60S ribosomal subunit biogenesis [Translation, ribosomal structure and biogenesis]
Probab=24.70 E-value=64 Score=33.69 Aligned_cols=40 Identities=25% Similarity=0.302 Sum_probs=35.0
Q ss_pred hccccCCCChHHHHHHHHHHHHHHHHHHHHHHhccCCHHH
Q 006987 430 LGSEATQDPTRLEKEIRSAAAEREQAHIDRNIARKLTPAE 469 (622)
Q Consensus 430 Lg~eAV~DPTkvEa~VR~QmeeR~~~He~~NeeRKLT~Eq 469 (622)
+.++..-.||-|-+.+|.|.+|+..+..+.|.+|+.-+.|
T Consensus 231 Ykn~~~vs~~~vra~ir~qaae~~~~R~es~~er~vr~~~ 270 (283)
T COG5154 231 YKNETFVSSTMVRAAIRNQAAENLFARKESNLERQVRAQQ 270 (283)
T ss_pred eecccccchHHHHHHHHHHHHHHHHhhhhHHHHHHHHHhc
Confidence 4567778899999999999999999999999999876544
No 49
>KOG2879 consensus Predicted E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]
Probab=24.23 E-value=80 Score=34.09 Aligned_cols=11 Identities=45% Similarity=0.597 Sum_probs=7.1
Q ss_pred CCccCCCCCCc
Q 006987 40 PFLLSTDGTSS 50 (622)
Q Consensus 40 ~~~~~~~~~~~ 50 (622)
|-+||+-||++
T Consensus 229 p~~sss~~t~~ 239 (298)
T KOG2879|consen 229 PKFSSSTGTSD 239 (298)
T ss_pred CCcccccccCC
Confidence 55666666665
No 50
>PF12396 DUF3659: Protein of unknown function (DUF3659) ; InterPro: IPR022124 This domain family is found in bacteria and eukaryotes, and is approximately 70 amino acids in length.
Probab=22.42 E-value=49 Score=28.13 Aligned_cols=19 Identities=37% Similarity=0.704 Sum_probs=15.3
Q ss_pred EecCCCCccccCCCeeecc
Q 006987 185 RVDALGREIDEHGNVVNRT 203 (622)
Q Consensus 185 ~lD~~GR~ID~~G~vI~~~ 203 (622)
.+|++|..+|.+|++|-..
T Consensus 38 ~vd~~G~I~d~~G~viGka 56 (64)
T PF12396_consen 38 KVDEDGDILDKDGNVIGKA 56 (64)
T ss_pred cCCCCCCEECCCCCEEEEE
Confidence 4788999999999988643
No 51
>TIGR00985 3a0801s04tom mitochondrial import receptor subunit translocase of outer membrane 20 kDa subunit.
Probab=20.74 E-value=2.2e+02 Score=27.96 Aligned_cols=19 Identities=16% Similarity=0.113 Sum_probs=14.3
Q ss_pred cCCCChHHHHHHHHHHHHH
Q 006987 434 ATQDPTRLEKEIRSAAAER 452 (622)
Q Consensus 434 AV~DPTkvEa~VR~QmeeR 452 (622)
-..|++.+|+---+||+.=
T Consensus 79 ~p~d~~e~E~~Fl~eV~~G 97 (148)
T TIGR00985 79 DPTDPSEKEAFFLQEVQLG 97 (148)
T ss_pred CCCCHHHHHHHHHHHHHHH
Confidence 3568888888888888754
No 52
>PF07462 MSP1_C: Merozoite surface protein 1 (MSP1) C-terminus; InterPro: IPR010901 This entry represents the C-terminal region of merozoite surface protein 1 (MSP1), which is found in a number of Plasmodium species. MSP-1 is a 200 kDa protein expressed on the surface of the Plasmodium vivax merozoite. MSP-1 of Plasmodium species is synthesised as a high-molecular-weight precursor and then processed into several fragments. At the time of red cell invasion by the merozoite, only the 19 kDa C-terminal fragment (MSP-119), which contains two epidermal growth factor-like domains, remains on the surface. Antibodies against MSP-119 inhibit merozoite entry into red cells, and immunisation with MSP-119 protects monkeys from challenging infections. Hence, MSP-119 is considered a promising vaccine candidate [].; GO: 0009405 pathogenesis, 0016020 membrane
Probab=20.54 E-value=1.5e+02 Score=34.67 Aligned_cols=21 Identities=38% Similarity=0.461 Sum_probs=15.1
Q ss_pred CCcchHHHHHHHHHHHHHHHH
Q 006987 56 GSLSLDALAKAKKALQMQKEL 76 (622)
Q Consensus 56 ~~~~~~~~~~~~~~~~~~~~~ 76 (622)
|+-.-+-.+..+.|||-=+||
T Consensus 237 G~~~~~n~~~Vk~ALq~YqEL 257 (574)
T PF07462_consen 237 GNDHAKNIAEVKEALQAYQEL 257 (574)
T ss_pred CCChhhhHHHHHHHHHHHHHh
Confidence 344455667789999988877
Done!