Query         006987
Match_columns 622
No_of_seqs    150 out of 215
Neff          4.1 
Searched_HMMs 29240
Date          Mon Mar 25 14:13:20 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/006987.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/006987hhsearch_pdb -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 1yrx_A Hypothetical protein RS  96.2   0.013 4.3E-07   53.4   7.9   85  507-622    30-114 (121)
  2 2iyg_A APPA, antirepressor of   95.0   0.046 1.6E-06   49.9   7.0   79  506-603    41-119 (124)
  3 2hfn_A Synechocystis photorece  94.3   0.081 2.8E-06   49.6   6.9   84  506-608    31-118 (153)
  4 1x0p_A Hypothetical protein TL  94.2   0.045 1.5E-06   50.8   5.0   83  507-608    29-115 (143)
  5 2byc_A Blue-light receptor of   92.4    0.18 6.3E-06   46.6   6.0   72  507-597    31-102 (137)
  6 3gfz_A Klebsiella pneumoniae B  86.7     1.2 4.2E-05   46.9   7.5   85  508-612    37-126 (413)
  7 2lxf_A Uncharacterized protein  78.3     2.9  0.0001   37.9   5.5   61  484-544    30-92  (121)
  8 2vh7_A Acylphosphatase-1; hydr  76.7       4 0.00014   35.3   5.7   49  497-545    18-67  (99)
  9 1aps_A Acylphosphatase; hydrol  75.2       5 0.00017   34.5   5.9   54  491-544    10-65  (98)
 10 1ulr_A Putative acylphosphatas  69.1     3.3 0.00011   35.1   3.2   45  501-545    16-61  (88)
 11 2fhm_A Probable acylphosphatas  68.9     3.2 0.00011   35.2   3.2   46  501-546    16-62  (91)
 12 2gv1_A Probable acylphosphatas  68.3     3.1  0.0001   35.5   2.9   48  498-545    15-63  (92)
 13 1urr_A CG18505 protein; acylph  67.4     3.1 0.00011   36.2   2.8   50  497-546    21-71  (102)
 14 1w2i_A Acylphosphatase; hydrol  64.9     3.1 0.00011   35.5   2.3   45  500-544    17-62  (91)
 15 3trg_A Acylphosphatase; fatty   64.6     3.4 0.00012   35.9   2.5   49  497-545    22-71  (98)
 16 2bjd_A Acylphosphatase; hypert  64.5     3.8 0.00013   35.7   2.8   49  496-544    23-72  (101)
 17 3zs9_C Golgi to ER traffic pro  55.7     8.3 0.00028   28.8   2.8   20  384-403     3-22  (38)
 18 3itf_A Periplasmic adaptor pro  54.3      60  0.0021   30.1   9.1   81  379-471    40-125 (145)
 19 1f32_A Major pepsin inhibitor   53.3     9.7 0.00033   35.7   3.5   36  385-420    96-144 (149)
 20 2kxh_B Peptide of FAR upstream  45.7      16 0.00056   26.1   2.9   16  135-150    10-25  (31)
 21 3sjd_D Golgi to ER traffic pro  44.2      18 0.00062   27.9   3.2   24  381-404    10-33  (46)
 22 1gxu_A Hydrogenase maturation   43.7      11 0.00037   32.2   2.1   37  497-534    17-54  (91)
 23 3o39_A Periplasmic protein rel  42.4      72  0.0025   28.2   7.3   78  379-472    12-98  (108)
 24 2kne_B CAM, ATPase, Ca++ trans  35.9      19 0.00063   25.3   1.9   24   20-43      4-27  (28)
 25 2ksw_A Oryctin; kazal-type, pr  28.2      47  0.0016   26.6   3.3   28  514-542    15-42  (66)
 26 3oeo_A Spheroplast protein Y;   27.9      52  0.0018   30.0   4.1   81  379-471    28-113 (138)

No 1  
>1yrx_A Hypothetical protein RSPH03001874; ferredoxin-like fold, flavin binding, photoreceptor, transcr; HET: FMN D9G; 2.30A {Rhodobacter sphaeroides 2} SCOP: d.58.10.2 PDB: 2bun_A*
Probab=96.19  E-value=0.013  Score=53.36  Aligned_cols=85  Identities=16%  Similarity=0.295  Sum_probs=66.8

Q ss_pred             ccccccccceeEEEEcCCceEEEEecchhHHHHHHHHHhhhcCCCccCcccCcCccccCCCCCCeeEEEEeeecCCCCCC
Q 006987          507 DVNAHENRLTGCAVICEGINVVVVEGGSKSIKRYGKLMLRRIDWAKAVKEEDEDEDETTDKPVNKCVLVWQGNVARPSFN  586 (622)
Q Consensus       507 ~~NAqQl~LTG~cli~~~~nlVVVEGG~KsiKkYkkLMl~RIkW~e~~~~~d~~~~e~~d~~~N~C~LVWEG~vk~r~F~  586 (622)
                      ..|=.+.++||+-+++.+.=+=|.||.+.++..   |+ .||.=+.               .-..|..+-.|.+.+|.|.
T Consensus        30 r~~N~~~gITG~Ll~~~g~F~Q~LEG~~~~V~~---Ly-~rI~~D~---------------RH~~v~~l~~~~i~~R~F~   90 (121)
T 1yrx_A           30 QAHNARAQLTGALFYSQGVFFQWLEGRPAAVAE---VM-THIQRDR---------------RHSNVEILAEEPIAKRRFA   90 (121)
T ss_dssp             HHHHHHHTCEEEEEEETTEEEEEEEECHHHHHH---HH-HHHHTCT---------------TEEEEEEEEEEEESSCSCS
T ss_pred             HHhhhhcCCEEEEEEeCCEEEEEecCCHHHHHH---HH-HHHhcCC---------------CcCCeEEEEeeeccccccC
Confidence            456678999999999999889999999999975   33 5665332               2346889999999999999


Q ss_pred             CeeeEecCCHHHHHHHHHhcCchhHHHHHhcccCCC
Q 006987          587 RFFVHECMTEAAAKKVFADAGVAHYWDLAVNFNDEI  622 (622)
Q Consensus       587 ~w~~k~c~te~~Are~L~~~~vehYWDlA~~~~~~~  622 (622)
                      +|.|..+..+.            ..|.++..++.+|
T Consensus        91 ~WsM~~~~~~~------------~~~~l~~~~~~~~  114 (121)
T 1yrx_A           91 GWHMQLSCSEA------------DMRSLGLAESRQI  114 (121)
T ss_dssp             SEEEEECCCHH------------HHHHTTCCCCCCC
T ss_pred             CCcccccchHH------------HHHhhcccchhhh
Confidence            99999998774            5566666666655


No 2  
>2iyg_A APPA, antirepressor of PPSR, sensor of blue light; signal transduction; HET: FMN; 2.3A {Rhodobacter sphaeroides} PDB: 2iyi_A*
Probab=95.02  E-value=0.046  Score=49.88  Aligned_cols=79  Identities=15%  Similarity=0.274  Sum_probs=63.9

Q ss_pred             cccccccccceeEEEEcCCceEEEEecchhHHHHHHHHHhhhcCCCccCcccCcCccccCCCCCCeeEEEEeeecCCCCC
Q 006987          506 VDVNAHENRLTGCAVICEGINVVVVEGGSKSIKRYGKLMLRRIDWAKAVKEEDEDEDETTDKPVNKCVLVWQGNVARPSF  585 (622)
Q Consensus       506 V~~NAqQl~LTG~cli~~~~nlVVVEGG~KsiKkYkkLMl~RIkW~e~~~~~d~~~~e~~d~~~N~C~LVWEG~vk~r~F  585 (622)
                      -..|-.+.++||+-+++.+.=+=|.||.+.++..   |+ .||.=+.               .-..|..+-.|.+.+|.|
T Consensus        41 ar~~N~~~gITG~Ll~~~g~F~Q~LEG~~~~V~~---Ly-~rI~~D~---------------RH~~v~~L~~~~i~~R~F  101 (124)
T 2iyg_A           41 SQAHNARAQLTGALFYSQGVFFQWLEGRPAAVAE---VM-THIQRDR---------------RHSNVEILAEEPIAKRRF  101 (124)
T ss_dssp             HHHHHHHHTCEEEEEEETTEEEEEEEECHHHHHH---HH-HHHHHCT---------------TEEEEEEEEEEECSSCSS
T ss_pred             HHHhhhhcCCEEEEEEcCCEEEEEeeCCHHHHHH---HH-HHHhcCC---------------CcCCeEEEEeeecccCcc
Confidence            3456678999999999999889999999999975   33 5664332               234688999999999999


Q ss_pred             CCeeeEecCCHHHHHHHH
Q 006987          586 NRFFVHECMTEAAAKKVF  603 (622)
Q Consensus       586 ~~w~~k~c~te~~Are~L  603 (622)
                      .+|.|..+..+.+.+.+.
T Consensus       102 ~~WsM~~~~~~~~~~~l~  119 (124)
T 2iyg_A          102 AGWHMQLSCSEADMRSLG  119 (124)
T ss_dssp             TTCSSEEECCHHHHHHHH
T ss_pred             CCCcccccchhHHHHHHh
Confidence            999999999888777654


No 3  
>2hfn_A Synechocystis photoreceptor (SLR1694); beta sheet ferredoxin-like fold, flavin binding protein, electron transport; HET: FMN; 1.80A {Synechocystis SP} PDB: 2hfo_A* 3mzi_A*
Probab=94.30  E-value=0.081  Score=49.63  Aligned_cols=84  Identities=14%  Similarity=0.141  Sum_probs=66.1

Q ss_pred             cccccccccceeEEEEcCCceEEEEecchhHHHHHHHHHhhhcCCCccCcccCcCccccCCCCCCeeEEEEeeecCCCCC
Q 006987          506 VDVNAHENRLTGCAVICEGINVVVVEGGSKSIKRYGKLMLRRIDWAKAVKEEDEDEDETTDKPVNKCVLVWQGNVARPSF  585 (622)
Q Consensus       506 V~~NAqQl~LTG~cli~~~~nlVVVEGG~KsiKkYkkLMl~RIkW~e~~~~~d~~~~e~~d~~~N~C~LVWEG~vk~r~F  585 (622)
                      -..|=.+.++||+-+++.+.=+=|.||.+.++..   |+ .||.=+.               .-..|..+-.|.+.+|.|
T Consensus        31 a~~~N~~~gITG~Ll~~~g~F~Q~LEG~~~~V~~---l~-~rI~~D~---------------RH~~v~~l~~~~i~~R~F   91 (153)
T 2hfn_A           31 SQRNNPANGITGLLCYSKPAFLQVLEGECEQVNE---TY-HRIVQDE---------------RHHSPQIIECMPIRRRNF   91 (153)
T ss_dssp             HHHHHHHHTCEEEEEEETTEEEEEEEEEHHHHHH---HH-HHHHTCT---------------TEEEEEEEEEEECSSCSS
T ss_pred             HHHhhhhcCcEEEEEEeCCEEEEEeeCCHHHHHH---HH-HHHhcCC---------------CcCCeEEEEecccCCCcc
Confidence            3456678999999999999889999999999975   33 5665332               234689999999999999


Q ss_pred             CCeeeEecCCH----HHHHHHHHhcCc
Q 006987          586 NRFFVHECMTE----AAAKKVFADAGV  608 (622)
Q Consensus       586 ~~w~~k~c~te----~~Are~L~~~~v  608 (622)
                      .+|.|....-+    ......|.+++.
T Consensus        92 ~~W~M~~~~~~~~~~~~~~~~~~~~~~  118 (153)
T 2hfn_A           92 EVWSMQAITVNDLSTEQVKTLVLKYSG  118 (153)
T ss_dssp             TTCSCEEEECSTTSCHHHHHHHHHTSS
T ss_pred             CCCcCeeecccccchhHHHHHHHhccc
Confidence            99999988766    666677766543


No 4  
>1x0p_A Hypothetical protein TLL0078; BLUF, FAD, structural genomics, electron transport; HET: FAD; 2.00A {Thermosynechococcus elongatus} SCOP: d.58.10.2
Probab=94.24  E-value=0.045  Score=50.78  Aligned_cols=83  Identities=13%  Similarity=0.159  Sum_probs=64.8

Q ss_pred             ccccccccceeEEEEcCCceEEEEecchhHHHHHHHHHhhhcCCCccCcccCcCccccCCCCCCeeEEEEeeecCCCCCC
Q 006987          507 DVNAHENRLTGCAVICEGINVVVVEGGSKSIKRYGKLMLRRIDWAKAVKEEDEDEDETTDKPVNKCVLVWQGNVARPSFN  586 (622)
Q Consensus       507 ~~NAqQl~LTG~cli~~~~nlVVVEGG~KsiKkYkkLMl~RIkW~e~~~~~d~~~~e~~d~~~N~C~LVWEG~vk~r~F~  586 (622)
                      ..|-.+.++||+-+++.+.=+=|.||.+.++..   |+ .||.=+.               .-..|..+-.|.+.+|.|.
T Consensus        29 ~~~N~~~~ITG~Ll~~~g~F~Q~LEG~~~~V~~---l~-~rI~~D~---------------RH~~v~~l~~~~i~~R~F~   89 (143)
T 1x0p_A           29 EVNNLRDGITGMLCYGNGMFLQTLEGDRQKVSE---TY-ARILKDP---------------RHHSAEIVEFKAIEERTFI   89 (143)
T ss_dssp             HHHHHHHTCEEEEEEETTEEEEEEEEEHHHHHH---HH-HHHHTCT---------------TEEEEEEEEEEECSSCSSC
T ss_pred             HHhhhhcCCEEEEEEcCCEEEEEecCCHHHHHH---HH-HHHhcCC---------------CcCCeEEEEeeeccccccC
Confidence            456678999999999999889999999999975   33 5665332               2346888999999999999


Q ss_pred             CeeeEecCCHH----HHHHHHHhcCc
Q 006987          587 RFFVHECMTEA----AAKKVFADAGV  608 (622)
Q Consensus       587 ~w~~k~c~te~----~Are~L~~~~v  608 (622)
                      +|.|....-+.    ....+|.+++.
T Consensus        90 ~W~M~~~~~~~~~~~~~~~~~~~~~~  115 (143)
T 1x0p_A           90 NWSMRLVQLGEMDSDTIRRLRLKYSP  115 (143)
T ss_dssp             SCSCCEEEGGGSCHHHHHHHHHHTCS
T ss_pred             CCcceeecccccchHHHHHHHHhccc
Confidence            99998776655    66677766544


No 5  
>2byc_A Blue-light receptor of the BLUF-family; signaling protein, photoreceptor, flavin; HET: FMN; 1.9A {Rhodobacter sphaeroides} SCOP: d.58.10.2
Probab=92.41  E-value=0.18  Score=46.57  Aligned_cols=72  Identities=14%  Similarity=0.083  Sum_probs=58.4

Q ss_pred             ccccccccceeEEEEcCCceEEEEecchhHHHHHHHHHhhhcCCCccCcccCcCccccCCCCCCeeEEEEeeecCCCCCC
Q 006987          507 DVNAHENRLTGCAVICEGINVVVVEGGSKSIKRYGKLMLRRIDWAKAVKEEDEDEDETTDKPVNKCVLVWQGNVARPSFN  586 (622)
Q Consensus       507 ~~NAqQl~LTG~cli~~~~nlVVVEGG~KsiKkYkkLMl~RIkW~e~~~~~d~~~~e~~d~~~N~C~LVWEG~vk~r~F~  586 (622)
                      ..|=.+.++||+-+++.+.=+=|.||.+.++..   |+ .||.=+.               .-..|..+-.|.+.+|.|.
T Consensus        31 r~~N~~~gITG~Ll~~~g~F~QvLEG~~~~V~~---L~-~rI~~D~---------------RH~~v~~L~~~~i~~R~F~   91 (137)
T 2byc_A           31 RVRNLRLGITGILLYNGVHFVQTIEGPRSACDE---LF-RLISADP---------------RHQEILAFDLEPITARRFP   91 (137)
T ss_dssp             HHHHHHHTCEEEEEECSSEEEEEEEEEHHHHHH---HH-HHHHTCT---------------TEEEEEEEEEEECSSCSST
T ss_pred             HHhhhhcCCEEEEEEeCCEEEEEeeCCHHHHHH---HH-HHHhcCC---------------CcCCeEEEEecccCCCcCC
Confidence            456678999999999999989999999999975   33 5664332               2346999999999999999


Q ss_pred             CeeeEecCCHH
Q 006987          587 RFFVHECMTEA  597 (622)
Q Consensus       587 ~w~~k~c~te~  597 (622)
                      +|.|....-+.
T Consensus        92 ~W~M~~~~~~~  102 (137)
T 2byc_A           92 DWSMRIVSRKE  102 (137)
T ss_dssp             TCSCEEECHHH
T ss_pred             CCcCccccccc
Confidence            99999877654


No 6  
>3gfz_A Klebsiella pneumoniae BLRP1; TIM-barrel, EAL domain, BLUF domain, hydrolase, signaling PR; HET: C2E FMN; 2.05A {Klebsiella pneumoniae subsp} PDB: 3gfy_A* 3gfx_A* 3gg0_A* 3gg1_A* 2kb2_A*
Probab=86.69  E-value=1.2  Score=46.94  Aligned_cols=85  Identities=14%  Similarity=0.070  Sum_probs=61.0

Q ss_pred             cccccccceeEEEEcCCceEEEEecchhHHHHHHHHHhhhcCCCccCcccCcCccccCCCCCCeeEEEEeeecCCCCCCC
Q 006987          508 VNAHENRLTGCAVICEGINVVVVEGGSKSIKRYGKLMLRRIDWAKAVKEEDEDEDETTDKPVNKCVLVWQGNVARPSFNR  587 (622)
Q Consensus       508 ~NAqQl~LTG~cli~~~~nlVVVEGG~KsiKkYkkLMl~RIkW~e~~~~~d~~~~e~~d~~~N~C~LVWEG~vk~r~F~~  587 (622)
                      .|-.+.++||+-+++.+.=+=|.||.+.++..   | ..||.=+.               .-..|..+-.|.+..|.|.+
T Consensus        37 ~~N~~~~itG~L~~~~~~F~Q~lEG~~~~v~~---l-~~~I~~D~---------------RH~~v~~l~~~~~~~r~F~~   97 (413)
T 3gfz_A           37 SKNLPLGITGILLFNGLQFFQVLEGTEEALES---L-FSEIQSDP---------------RHRDVVELMRDYSAYRRFHG   97 (413)
T ss_dssp             HHHGGGTCEEEEEECSSEEEEEEEEEHHHHHH---H-HHHHHTCT---------------TCEEEEEEEEEECSSCSSTT
T ss_pred             HhccccCcEEEEEEeCCEEEEEEeCCHHHHHH---H-HHHHhcCC---------------CcCCeEEEEEeecCcccCCC
Confidence            56678999999999999889999999999985   3 35765333               23468899999999999999


Q ss_pred             eeeEec-----CCHHHHHHHHHhcCchhHH
Q 006987          588 FFVHEC-----MTEAAAKKVFADAGVAHYW  612 (622)
Q Consensus       588 w~~k~c-----~te~~Are~L~~~~vehYW  612 (622)
                      |.|...     .++.....+| +++-.+|+
T Consensus        98 w~M~~~~l~~~~~~~~~~~i~-~~~~~~~~  126 (413)
T 3gfz_A           98 TGMRILDLRLFETDGALEEIL-RFSTFGVT  126 (413)
T ss_dssp             CSCCEEEGGGSCTTHHHHHHH-HHCC----
T ss_pred             cchhhccccccChHHHHHHHH-hhCCcccc
Confidence            999875     2333333444 55555554


No 7  
>2lxf_A Uncharacterized protein; beaver fever, giardiasis, seattle structural genomics center infectious disease, ssgcid, structural genomics; NMR {Giardia lamblia}
Probab=78.31  E-value=2.9  Score=37.92  Aligned_cols=61  Identities=18%  Similarity=0.180  Sum_probs=50.1

Q ss_pred             CCceEEEEEEEcCCC-CCccccccccccccccceeEEE-EcCCceEEEEecchhHHHHHHHHH
Q 006987          484 SVETIVSVYKINDLS-HPKTRFKVDVNAHENRLTGCAV-ICEGINVVVVEGGSKSIKRYGKLM  544 (622)
Q Consensus       484 ~~gv~vaVyrI~~Ls-nP~hrFKV~~NAqQl~LTG~cl-i~~~~nlVVVEGG~KsiKkYkkLM  544 (622)
                      +..+....|+|.=.. -=--|+-+...|++|+|+|.|. ..++-=.|++||.+.++..|...+
T Consensus        30 ~~di~t~~frV~G~VQGVGFR~~v~~~A~~lgL~G~VrN~~dG~Vei~~eG~~~~v~~f~~~l   92 (121)
T 2lxf_A           30 SEDVTTLCYRVTGKVQGVFFRKYTKKEADALSLVGYVTNNEDGSVSGVVQGPKEQVDAFVKYL   92 (121)
T ss_dssp             STTEEEEEEEEEECTTCCCCHHHHHHHHHHHTCEEEEEECTTSCEEEEEEEEHHHHHHHHHHH
T ss_pred             ccCEEEEEEEEEEeeCCcCchHHHHHHHHHcCCEEEEEECCCCCEEEEEEECHHHHHHHHHHH
Confidence            356778889998654 4578999999999999999886 556656789999999999998776


No 8  
>2vh7_A Acylphosphatase-1; hydrolase, acetylation; 1.45A {Homo sapiens} PDB: 2w4c_A 2w4p_A 2k7k_A 2k7j_A 2acy_A
Probab=76.72  E-value=4  Score=35.26  Aligned_cols=49  Identities=10%  Similarity=0.073  Sum_probs=39.3

Q ss_pred             CCCCccccccccccccccceeEEE-EcCCceEEEEecchhHHHHHHHHHh
Q 006987          497 LSHPKTRFKVDVNAHENRLTGCAV-ICEGINVVVVEGGSKSIKRYGKLML  545 (622)
Q Consensus       497 LsnP~hrFKV~~NAqQl~LTG~cl-i~~~~nlVVVEGG~KsiKkYkkLMl  545 (622)
                      ..-=--|+-+..-|++|+|+|.|. ..++-=.|++||.+.++..|...+.
T Consensus        18 VQGVGFR~~v~~~A~~lgL~G~V~N~~dG~Vei~~eG~~~~v~~f~~~l~   67 (99)
T 2vh7_A           18 VQGVFFRKHTQAEGKKLGLVGWVQNTDRGTVQGQLQGPISKVRHMQEWLE   67 (99)
T ss_dssp             CSSSCHHHHHHHHHHHTTCEEEEEECTTSCEEEEEEEEHHHHHHHHHHHH
T ss_pred             eCCcChHHHHHHHHHHcCCcEEEEECCCCCEEEEEEcCHHHHHHHHHHHH
Confidence            344556888889999999999875 5556457899999999999987775


No 9  
>1aps_A Acylphosphatase; hydrolase(acting on acid anhydrides); NMR {Equus caballus} SCOP: d.58.10.1
Probab=75.16  E-value=5  Score=34.55  Aligned_cols=54  Identities=13%  Similarity=0.167  Sum_probs=40.5

Q ss_pred             EEEEc-CCCCCccccccccccccccceeEEE-EcCCceEEEEecchhHHHHHHHHH
Q 006987          491 VYKIN-DLSHPKTRFKVDVNAHENRLTGCAV-ICEGINVVVVEGGSKSIKRYGKLM  544 (622)
Q Consensus       491 VyrI~-~LsnP~hrFKV~~NAqQl~LTG~cl-i~~~~nlVVVEGG~KsiKkYkkLM  544 (622)
                      -+.|. ...-=--|+-+..-|++|+|+|.|. ..++-=.|++||.+.++..|...+
T Consensus        10 ~i~V~G~VQGVGFR~~v~~~A~~lgL~G~V~N~~dG~Vei~~eG~~~~l~~f~~~l   65 (98)
T 1aps_A           10 DYEVFGRVQGVCFRMYAEDEARKIGVVGWVKNTSKGTVTGQVQGPEEKVNSMKSWL   65 (98)
T ss_dssp             EEEEECTTSCCCCTTHHHHHHHHHTCEEEEECCTTCEEEEEEEEEHHHHHHHHHSS
T ss_pred             EEEEEEEECCcCHHHHHHHHHHHcCCeEEEEECCCCcEEEEEEeCHHHHHHHHHHH
Confidence            34444 3445567888999999999999875 455645789999999999886555


No 10 
>1ulr_A Putative acylphosphatase; hydrolase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.30A {Thermus thermophilus} SCOP: d.58.10.1
Probab=69.13  E-value=3.3  Score=35.08  Aligned_cols=45  Identities=24%  Similarity=0.229  Sum_probs=36.2

Q ss_pred             ccccccccccccccceeEEE-EcCCceEEEEecchhHHHHHHHHHh
Q 006987          501 KTRFKVDVNAHENRLTGCAV-ICEGINVVVVEGGSKSIKRYGKLML  545 (622)
Q Consensus       501 ~hrFKV~~NAqQl~LTG~cl-i~~~~nlVVVEGG~KsiKkYkkLMl  545 (622)
                      --|+-+..-|++|+|+|.|. ..++-=.|++||.+.++..|...+.
T Consensus        16 GFR~~v~~~A~~lgl~G~V~N~~dG~Vei~~eG~~~~i~~f~~~l~   61 (88)
T 1ulr_A           16 GYRAFAQKKALELGLSGYAENLPDGRVEVVAEGPKEALELFLHHLK   61 (88)
T ss_dssp             SHHHHHHHHHHHTTCEEEEEECTTSCEEEEEESCHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHcCCeEEEEECCCCcEEEEEEeCHHHHHHHHHHHH
Confidence            35677788899999999885 4456457889999999999887774


No 11 
>2fhm_A Probable acylphosphatase; hydrolase; NMR {Bacillus subtilis} PDB: 2hlt_A 2hlu_A 3br8_A
Probab=68.88  E-value=3.2  Score=35.23  Aligned_cols=46  Identities=17%  Similarity=0.322  Sum_probs=36.9

Q ss_pred             ccccccccccccccceeEEE-EcCCceEEEEecchhHHHHHHHHHhh
Q 006987          501 KTRFKVDVNAHENRLTGCAV-ICEGINVVVVEGGSKSIKRYGKLMLR  546 (622)
Q Consensus       501 ~hrFKV~~NAqQl~LTG~cl-i~~~~nlVVVEGG~KsiKkYkkLMl~  546 (622)
                      --|+-+..-|++|+|+|.|. ..++-=.|++||.+.++..|...+.+
T Consensus        16 GFR~~v~~~A~~lgl~G~V~N~~dG~Vei~~eG~~~~i~~f~~~l~~   62 (91)
T 2fhm_A           16 GFRYFVQMEADKRKLAGWVKNRDDGRVEILAEGPENALQSFVEAVKN   62 (91)
T ss_dssp             CHHHHHHHHHHHTTCEEEEEECTTSCEEEEEEECHHHHHHHHHHHHT
T ss_pred             CHHHHHHHHHHHcCCeEEEEECCCCcEEEEEEeCHHHHHHHHHHHHh
Confidence            35677888899999999885 45564578999999999999887744


No 12 
>2gv1_A Probable acylphosphatase; globular alpha-helix/beta-sheet protein, hydrolase; NMR {Escherichia coli}
Probab=68.34  E-value=3.1  Score=35.51  Aligned_cols=48  Identities=21%  Similarity=0.238  Sum_probs=38.1

Q ss_pred             CCCccccccccccccccceeEEE-EcCCceEEEEecchhHHHHHHHHHh
Q 006987          498 SHPKTRFKVDVNAHENRLTGCAV-ICEGINVVVVEGGSKSIKRYGKLML  545 (622)
Q Consensus       498 snP~hrFKV~~NAqQl~LTG~cl-i~~~~nlVVVEGG~KsiKkYkkLMl  545 (622)
                      .-=--|+-+..-|++|+|+|.|. ..++-=.|++||.+.++..|...+.
T Consensus        15 QGVGFR~~v~~~A~~lgL~G~V~N~~dG~Vei~~eG~~~~i~~f~~~l~   63 (92)
T 2gv1_A           15 QGVGFRYTTQYEAKRLGLTGYAKNLDDGSVEVVACGEEGQVEKLMQWLK   63 (92)
T ss_dssp             TTTTCCSHHHHHHHHHTCCCEEEECSSSCEEEEECSCHHHHHHHHHHHH
T ss_pred             CCcCHHHHHHHHHHHcCCeEEEEECCCCcEEEEEEeCHHHHHHHHHHhh
Confidence            33456788888999999999885 4456457889999999999887773


No 13 
>1urr_A CG18505 protein; acylphosphatase, enzyme; 1.5A {Drosophila melanogaster} SCOP: d.58.10.1
Probab=67.40  E-value=3.1  Score=36.15  Aligned_cols=50  Identities=10%  Similarity=0.027  Sum_probs=40.2

Q ss_pred             CCCCccccccccccccccceeEEE-EcCCceEEEEecchhHHHHHHHHHhh
Q 006987          497 LSHPKTRFKVDVNAHENRLTGCAV-ICEGINVVVVEGGSKSIKRYGKLMLR  546 (622)
Q Consensus       497 LsnP~hrFKV~~NAqQl~LTG~cl-i~~~~nlVVVEGG~KsiKkYkkLMl~  546 (622)
                      ..-=--|+-+..-|++|+|+|.|. ..++-=.|++||.+.++..|...+.+
T Consensus        21 VQGVGFR~~v~~~A~~lgL~G~V~N~~dG~Vei~~eG~~~~l~~f~~~l~~   71 (102)
T 1urr_A           21 VQGVFFRKHTSHEAKRLGVRGWCMNTRDGTVKGQLEAPMMNLMEMKHWLEN   71 (102)
T ss_dssp             CSSSSHHHHHHHHHHHHTCEEEEEECTTSCEEEEEEECHHHHHHHHHHHHH
T ss_pred             ECCcChhHHHHHHHHHhCCcEEEEECCCCCEEEEEEcCHHHHHHHHHHHHh
Confidence            444557888899999999999875 55564578999999999999887753


No 14 
>1w2i_A Acylphosphatase; hydrolase, thermophilic, stability, amyloid; 1.5A {Pyrococcus horikoshii} SCOP: d.58.10.1 PDB: 1v3z_A 2w4d_A
Probab=64.94  E-value=3.1  Score=35.45  Aligned_cols=45  Identities=16%  Similarity=0.206  Sum_probs=36.0

Q ss_pred             CccccccccccccccceeEEE-EcCCceEEEEecchhHHHHHHHHH
Q 006987          500 PKTRFKVDVNAHENRLTGCAV-ICEGINVVVVEGGSKSIKRYGKLM  544 (622)
Q Consensus       500 P~hrFKV~~NAqQl~LTG~cl-i~~~~nlVVVEGG~KsiKkYkkLM  544 (622)
                      =--|+-+...|++|+|+|.|. ..++-=.|++||.+.++..|...+
T Consensus        17 VGFR~~v~~~A~~lgL~G~V~N~~dG~Vei~~~G~~~~v~~f~~~l   62 (91)
T 1w2i_A           17 VGFRWSMQREARKLGVNGWVRNLPDGSVEAVLEGDEERVEALIGWA   62 (91)
T ss_dssp             SSHHHHHHHHHHHHTCEEEEEECTTSCEEEEEEEEHHHHHHHHHHT
T ss_pred             cCHHHHHHHHHHHcCCeEEEEECCCCCEEEEEEeCHHHHHHHHHHH
Confidence            345777888999999999885 445645788999999999887665


No 15 
>3trg_A Acylphosphatase; fatty acid and phospholipid metabolism, hydrolase; 1.60A {Coxiella burnetii}
Probab=64.56  E-value=3.4  Score=35.86  Aligned_cols=49  Identities=24%  Similarity=0.179  Sum_probs=38.9

Q ss_pred             CCCCccccccccccccccceeEEE-EcCCceEEEEecchhHHHHHHHHHh
Q 006987          497 LSHPKTRFKVDVNAHENRLTGCAV-ICEGINVVVVEGGSKSIKRYGKLML  545 (622)
Q Consensus       497 LsnP~hrFKV~~NAqQl~LTG~cl-i~~~~nlVVVEGG~KsiKkYkkLMl  545 (622)
                      ..-=--|+-+..-|++|+|+|.|. ..++-=.|++||.+.++..|...+.
T Consensus        22 VQGVGFR~~v~~~A~~lgL~G~VrN~~dG~Vei~~eG~~~~l~~f~~~l~   71 (98)
T 3trg_A           22 VQGVFFRESVRKKAEELQLTGWVKNLSHGDVELVACGERDSIMILTEWLW   71 (98)
T ss_dssp             CSSSCHHHHHHHHHHHTTCEEEEEECTTSCEEEEEEEEHHHHHHHHHHTT
T ss_pred             ECCCCccHHHHHHHHHcCCeEEEEECCCCEEEEEEEECHHHHHHHHHHHH
Confidence            444567888899999999999986 4455467889999999998876653


No 16 
>2bjd_A Acylphosphatase; hyperthermophIle, hydrolase; 1.27A {Sulfolobus solfataricus} PDB: 2bje_A 1y9o_A
Probab=64.47  E-value=3.8  Score=35.70  Aligned_cols=49  Identities=20%  Similarity=0.178  Sum_probs=40.0

Q ss_pred             CCCCCccccccccccccccceeEEE-EcCCceEEEEecchhHHHHHHHHH
Q 006987          496 DLSHPKTRFKVDVNAHENRLTGCAV-ICEGINVVVVEGGSKSIKRYGKLM  544 (622)
Q Consensus       496 ~LsnP~hrFKV~~NAqQl~LTG~cl-i~~~~nlVVVEGG~KsiKkYkkLM  544 (622)
                      ...----|+-+..-|++|+|+|.|. ..++-=.|++||.+.++..|...+
T Consensus        23 ~VQGVGFR~~v~~~A~~lgL~G~V~N~~dG~Vei~~eG~~~~i~~f~~~l   72 (101)
T 2bjd_A           23 LVQGVGFRKFVQIHAIRLGIKGYAKNLPDGSVEVVAEGYEEALSKLLERI   72 (101)
T ss_dssp             ECSSSSHHHHHHHHHHHTTCEEEEEECTTSCEEEEEEEEHHHHHHHHHHH
T ss_pred             eECCcCHHHHHHHHHHHcCCeEEEEECCCCcEEEEEEeCHHHHHHHHHHH
Confidence            3555678899999999999999885 455645789999999999987776


No 17 
>3zs9_C Golgi to ER traffic protein 2; hydrolase-transport protein complex, membrane protein, targe factor; HET: ADP; 2.10A {Saccharomyces cerevisiae}
Probab=55.67  E-value=8.3  Score=28.77  Aligned_cols=20  Identities=30%  Similarity=0.478  Sum_probs=16.5

Q ss_pred             CCCHHHHHHHHHHHHHHHHH
Q 006987          384 KLTKKEQKKLRTQRRLAREK  403 (622)
Q Consensus       384 yLTKKEqKKLRRqrR~e~~K  403 (622)
                      -||..|+.+|||.||+++-+
T Consensus         3 els~~ekaRlrRERR~aKi~   22 (38)
T 3zs9_C            3 ELTEAEKRRLLRERRQKKFS   22 (38)
T ss_dssp             -CCHHHHHHHHHHHHHHHHT
T ss_pred             ccCHHHHHHHHHHHHHHHHH
Confidence            38899999999999987643


No 18 
>3itf_A Periplasmic adaptor protein CPXP; CPXR, CPXA, cpxrap, CPX-pathway, envelope stress, transduction; HET: MSE; 1.45A {Escherichia coli str} PDB: 3qzc_A
Probab=54.27  E-value=60  Score=30.12  Aligned_cols=81  Identities=16%  Similarity=0.291  Sum_probs=41.3

Q ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhhhhhhhccccCCCChHHHHHHHHHHHHHHHHHHH
Q 006987          379 PPQPLKLTKKEQKKLRTQRRLAREKDRQEMIRQGLIEPPKPKVKMSNLMKVLGSEATQDPTRLEKEIRSAAAEREQAHID  458 (622)
Q Consensus       379 ~~~plyLTKKEqKKLRRqrR~e~~KEkQdKIRLGL~PPPpPKVKLSNLMrVLg~eAV~DPTkvEa~VR~QmeeR~~~He~  458 (622)
                      ....|-||..-+.+||..+...+...+          ++ -+-...-|..++.+ .--|+.+|++.+.+..+.+.....+
T Consensus        40 m~~~L~LTdeQkqqir~L~~~~r~~~~----------~~-~~~~r~~l~~Li~a-d~fDeaa~ral~~~~~~~~~e~~v~  107 (145)
T 3itf_A           40 MFDGISLTEHQRQQMRDLMQQARHEQP----------PV-NVSELETMHRLVTA-ENFDENAVRAQAEKMANEQIARQVE  107 (145)
T ss_dssp             TTTTCCCCHHHHHHHHHHHHHHHHHSC----------CC-CHHHHHHHHHHHTC-SSCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ccccCCCCHHHHHHHHHHHHHHHHHhh----------hc-cHHHHHHHHHHHcc-CCCCHHHHHHHHHHHHHHHHHHHHH
Confidence            456789999999999987654443211          11 01111223333343 3346555554444443333332222


Q ss_pred             H----HHhcc-CCHHHHH
Q 006987          459 R----NIARK-LTPAERR  471 (622)
Q Consensus       459 ~----NeeRK-LT~EqRr  471 (622)
                      +    |.-.. ||||||.
T Consensus       108 r~k~~~qiy~vLTPEQk~  125 (145)
T 3itf_A          108 MAKVRNQMYRLLTPEQQA  125 (145)
T ss_dssp             HHHHHHHHHTTSCHHHHH
T ss_pred             HHHHHHHHHhhCCHHHHH
Confidence            2    33333 9999974


No 19 
>1f32_A Major pepsin inhibitor PI-3; proteinase inhibitor, hydrolase inhibitor; 1.75A {Ascaris suum} SCOP: d.62.1.1 PDB: 1f34_B*
Probab=53.26  E-value=9.7  Score=35.71  Aligned_cols=36  Identities=33%  Similarity=0.577  Sum_probs=20.8

Q ss_pred             CCHHHHHHHHH-HHHHHHHHHHHHHHHc------------CCCCCCCcc
Q 006987          385 LTKKEQKKLRT-QRRLAREKDRQEMIRQ------------GLIEPPKPK  420 (622)
Q Consensus       385 LTKKEqKKLRR-qrR~e~~KEkQdKIRL------------GL~PPPpPK  420 (622)
                      ||..|+..|-. +......+|+|+.+++            ||.||++|-
T Consensus        96 LT~~Eq~EL~~y~~k~~a~eer~e~~~~~~~~~k~~k~~~~~~pP~kPS  144 (149)
T 1f32_A           96 LTAKDHAEVQTFREKIAAFEEQQENQPPSSGMPHGAVPAGGLSPPPPPS  144 (149)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHC--------------------CCCCCCG
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHhccchhhcCCCCCcccccCCCCCCCC
Confidence            89999999876 5555666666666554            677777763


No 20 
>2kxh_B Peptide of FAR upstream element-binding protein 1; RRM, FIR, FBP, protein-protein complex, protein binding; NMR {Homo sapiens}
Probab=45.75  E-value=16  Score=26.07  Aligned_cols=16  Identities=44%  Similarity=0.696  Sum_probs=14.3

Q ss_pred             cHHHHHHHHHHHHHhc
Q 006987          135 NIEAVKRAQELAAKMG  150 (622)
Q Consensus       135 ~~~~~~r~~~~~~~~~  150 (622)
                      =-+++.||+.+|++|+
T Consensus        10 FadA~~RaRQIaAKig   25 (31)
T 2kxh_B           10 FKDALQRARQIAAKIG   25 (31)
T ss_dssp             HHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHHhc
Confidence            3589999999999988


No 21 
>3sjd_D Golgi to ER traffic protein 2; ATPase, receptor complex, TA-protein biogenesis, GET pathway hydrolase-transport protein complex; HET: ADP; 4.60A {Saccharomyces cerevisiae}
Probab=44.24  E-value=18  Score=27.90  Aligned_cols=24  Identities=25%  Similarity=0.364  Sum_probs=16.7

Q ss_pred             CCCCCCHHHHHHHHHHHHHHHHHH
Q 006987          381 QPLKLTKKEQKKLRTQRRLAREKD  404 (622)
Q Consensus       381 ~plyLTKKEqKKLRRqrR~e~~KE  404 (622)
                      ..--|+..|+.+|||.||+++-+.
T Consensus        10 ~~~~lsa~EkaRLrRERR~aKi~~   33 (46)
T 3sjd_D           10 MGSELTEAEKRRLLRERRQKKFSN   33 (46)
T ss_dssp             -----CHHHHHHHHHHHHHHHHHH
T ss_pred             ccccccHHHHHHHHHHHHHHHHHc
Confidence            445688999999999999987554


No 22 
>1gxu_A Hydrogenase maturation protein HYPF; phosphatase, acylphosphatases, hydrogenase maturations, fibril formation, zinc-finger, complete proteome; 1.27A {Escherichia coli} SCOP: d.58.10.1 PDB: 1gxt_A
Probab=43.67  E-value=11  Score=32.19  Aligned_cols=37  Identities=19%  Similarity=-0.004  Sum_probs=29.2

Q ss_pred             CCCCccccccccccccccceeEEE-EcCCceEEEEecch
Q 006987          497 LSHPKTRFKVDVNAHENRLTGCAV-ICEGINVVVVEGGS  534 (622)
Q Consensus       497 LsnP~hrFKV~~NAqQl~LTG~cl-i~~~~nlVVVEGG~  534 (622)
                      ..-=--|+-+...|++|+|+|.|. ..++ =.|++||.+
T Consensus        17 VQGVGFR~~v~~~A~~lgL~G~VrN~~dG-Vei~~eG~~   54 (91)
T 1gxu_A           17 VQGVGFRPFVWQLAQQLNLHGDVCNDGDG-VEVRLREDP   54 (91)
T ss_dssp             CSSSSHHHHHHHHHHHHTCCEEEEECSSS-EEEEESSCC
T ss_pred             eCCcCHHHHHHHHHHHcCCeEEEEECCCc-EEEEEEECH
Confidence            444557888899999999999875 5566 577889988


No 23 
>3o39_A Periplasmic protein related to spheroblast format; alpha-helical, structural genomics, montreal-kingston bacter structural genomics initiative; HET: MSE; 2.60A {Escherichia coli}
Probab=42.39  E-value=72  Score=28.22  Aligned_cols=78  Identities=19%  Similarity=0.355  Sum_probs=46.1

Q ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhhhhhhhccccCCCChHHHHHHHHHHHHHHHHHHH
Q 006987          379 PPQPLKLTKKEQKKLRTQRRLAREKDRQEMIRQGLIEPPKPKVKMSNLMKVLGSEATQDPTRLEKEIRSAAAEREQAHID  458 (622)
Q Consensus       379 ~~~plyLTKKEqKKLRRqrR~e~~KEkQdKIRLGL~PPPpPKVKLSNLMrVLg~eAV~DPTkvEa~VR~QmeeR~~~He~  458 (622)
                      ....|-||-.-+-+||..+...+..-+          .| .+--...|..++.++.. |    |+.||.+++++.+.+.+
T Consensus        12 ~~~~L~LTd~Qk~qir~L~~~~r~~~~----------~~-~~~~r~~m~~Li~ad~F-D----Eaaar~l~~~~~~~~~e   75 (108)
T 3o39_A           12 SFKDLNLTDAQKQQIREIMKGQRDQMK----------RP-PLEERRAMHDIIASDTF-D----KAKAEAQIAKMEEQRKA   75 (108)
T ss_dssp             -CCCSCCCHHHHHHHHHHHHTTTTSCC----------CC-CHHHHHHHHHHHSSSSC-C----HHHHHHHHHHTHHHHHH
T ss_pred             CcCCCCCCHHHHHHHHHHHHHHHHhcc----------cc-cHHHHHHHHHHhccCCC-C----HHHHHHHHHHHHHHHHH
Confidence            457899998888888876665544211          11 11112234444544443 4    67777777777776666


Q ss_pred             HHHhc---------cCCHHHHHH
Q 006987          459 RNIAR---------KLTPAERRE  472 (622)
Q Consensus       459 ~NeeR---------KLT~EqRre  472 (622)
                      +=.+|         =||||||..
T Consensus        76 ~~v~~~r~~~qmy~lLTPEQk~q   98 (108)
T 3o39_A           76 NMLAHMETQNKIYNILTPEQKKQ   98 (108)
T ss_dssp             HHHHHHHHHHHHHTTSCHHHHHH
T ss_pred             HHHHHHHHHHHHHHhCCHHHHHH
Confidence            55444         499999743


No 24 
>2kne_B CAM, ATPase, Ca++ transporting, plasma membrane 4; protein/peptide, calcium pump, calmodulin, acetylation, calcium, isopeptide bond, methylation; NMR {Homo sapiens}
Probab=35.87  E-value=19  Score=25.31  Aligned_cols=24  Identities=38%  Similarity=0.614  Sum_probs=16.4

Q ss_pred             HHHHHhhhhHHHHHHHHHHhCCcc
Q 006987           20 NQLLWHRGLRLILLWLLVILPFLL   43 (622)
Q Consensus        20 ~~~~~~~~~~~~~~~~~~~~~~~~   43 (622)
                      .|+||-|||-.|-.=+-++-++.|
T Consensus         4 gqiLW~RgL~riqtQ~rvi~af~s   27 (28)
T 2kne_B            4 GQILWFRGLNRIQTQIKVVKAFHS   27 (28)
T ss_dssp             THHHHHHHHHHHHHHHHHHHHHHC
T ss_pred             cceeeeccHHHHHHHHHHHHhhhc
Confidence            489999999877665555444433


No 25 
>2ksw_A Oryctin; kazal-type, protease inhibitor, hydrolase inhibitor; NMR {Oryctes rhinoceros}
Probab=28.24  E-value=47  Score=26.61  Aligned_cols=28  Identities=25%  Similarity=0.442  Sum_probs=22.4

Q ss_pred             cceeEEEEcCCceEEEEecchhHHHHHHH
Q 006987          514 RLTGCAVICEGINVVVVEGGSKSIKRYGK  542 (622)
Q Consensus       514 ~LTG~cli~~~~nlVVVEGG~KsiKkYkk  542 (622)
                      .|.--|.++|.-+||||-||- +..+||-
T Consensus        15 dlvphcflnpekgivvvhggc-alskykc   42 (66)
T 2ksw_A           15 DLVPHCFLNPEKGIVVVHGGC-ALSKYKC   42 (66)
T ss_dssp             CSCCEEEECTTSCEEEECSHH-HHHHHHH
T ss_pred             cccchhhcccccCEEEEecce-eeeeccc
Confidence            456678999999999999984 6677764


No 26 
>3oeo_A Spheroplast protein Y; LTXXQ, extracytoplasmic stress response-related, signaling P; 2.70A {Escherichia coli}
Probab=27.92  E-value=52  Score=30.00  Aligned_cols=81  Identities=20%  Similarity=0.347  Sum_probs=42.9

Q ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhhhhhhhccccCCCChHHHHHHHHHHHHHHHHHH-
Q 006987          379 PPQPLKLTKKEQKKLRTQRRLAREKDRQEMIRQGLIEPPKPKVKMSNLMKVLGSEATQDPTRLEKEIRSAAAEREQAHI-  457 (622)
Q Consensus       379 ~~~plyLTKKEqKKLRRqrR~e~~KEkQdKIRLGL~PPPpPKVKLSNLMrVLg~eAV~DPTkvEa~VR~QmeeR~~~He-  457 (622)
                      ....|-||..-+.+||..+...+..-.          .+--..+ .-|..++.++ --|+.+|++.+.+..+.+..... 
T Consensus        28 m~~~L~LT~eQ~~qir~i~~~~r~~~~----------~~~~~~r-~~l~~Li~a~-~fDeaav~al~~~~~~~~~e~~~~   95 (138)
T 3oeo_A           28 MFKDLNLTDAQKQQIREIMKGQRDQMK----------RPPLEER-RAMHDIITSD-TFDKVKAEAQIAKMEEQRKANMLA   95 (138)
T ss_dssp             --CCSCCCTTHHHHHHHHHHHHSSSSC----------CCCTTHH-HHHHHHHTCS-SCCHHHHHHHHGGGSHHHHHHHHH
T ss_pred             HHhcCCCCHHHHHHHHHHHHHHHHHHH----------HHHHHHH-HHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHHHH
Confidence            457799999999999976544432111          1111111 3344444443 34767766666554433332222 


Q ss_pred             ---HHHHhcc-CCHHHHH
Q 006987          458 ---DRNIARK-LTPAERR  471 (622)
Q Consensus       458 ---~~NeeRK-LT~EqRr  471 (622)
                         -.|.-+. ||||||.
T Consensus        96 ~~~~~~~~~~vLTPEQr~  113 (138)
T 3oeo_A           96 HMETQNKIYNILTPEQKK  113 (138)
T ss_dssp             HHHHHHHHHTTSCHHHHH
T ss_pred             HHHHHHHHHHhCCHHHHH
Confidence               2355555 9999974


Done!