Query 006988
Match_columns 622
No_of_seqs 244 out of 1280
Neff 5.4
Searched_HMMs 29240
Date Mon Mar 25 14:14:47 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/006988.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/006988hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1a58_A Cyclophilin; isomerase, 100.0 3.2E-47 1.1E-51 368.8 19.6 174 1-174 1-175 (177)
2 2wfi_A Peptidyl-prolyl CIS-tra 100.0 5.5E-47 1.9E-51 367.8 20.4 174 1-174 3-178 (179)
3 2he9_A NK-tumor recognition pr 100.0 1.6E-46 5.6E-51 368.0 20.2 175 1-175 14-189 (192)
4 2poy_A Peptidyl-prolyl CIS-tra 100.0 4.5E-46 1.5E-50 363.3 19.5 172 2-174 15-186 (186)
5 2igv_A Peptidyl-prolyl CIS-tra 100.0 5.7E-46 2E-50 358.8 19.3 169 5-174 2-170 (173)
6 1qng_A Peptidyl-prolyl CIS-tra 100.0 1.5E-45 5.1E-50 355.0 18.1 168 5-174 2-169 (170)
7 1mzw_A Cyclophilin H, U-snRNP- 100.0 2.5E-45 8.5E-50 355.6 18.0 170 2-174 6-176 (177)
8 3pmp_A Cyclophilin A; peptidyl 100.0 5.9E-45 2E-49 348.9 19.0 162 5-175 1-163 (164)
9 2z6w_A Peptidyl-prolyl CIS-tra 100.0 7.6E-45 2.6E-49 348.5 19.4 160 6-174 3-163 (165)
10 2r99_A Peptidyl-prolyl CIS-tra 100.0 8.7E-45 3E-49 350.6 19.4 163 4-175 9-172 (173)
11 2cmt_A Peptidyl-prolyl CIS-tra 100.0 9.8E-45 3.4E-49 349.9 18.7 162 4-174 8-170 (172)
12 1z81_A Cyclophilin; structural 100.0 1.1E-44 3.6E-49 363.4 18.3 171 1-174 54-228 (229)
13 2haq_A Cyclophilin; rotamase, 100.0 2.1E-44 7.3E-49 347.5 18.2 161 4-174 9-171 (172)
14 3k2c_A Peptidyl-prolyl CIS-tra 100.0 3.9E-44 1.3E-48 351.5 19.8 166 1-175 22-190 (193)
15 3rdd_A Peptidyl-prolyl CIS-tra 100.0 3.1E-44 1E-48 349.9 18.7 163 4-175 20-183 (184)
16 3ich_A Peptidyl-prolyl CIS-tra 100.0 1.1E-43 3.8E-48 347.0 17.4 161 6-175 15-177 (188)
17 4fru_A Cyclophilin B, peptidyl 100.0 2.5E-43 8.4E-48 343.8 17.6 163 5-175 11-174 (185)
18 1ihg_A Cyclophilin 40; ppiase 100.0 5.2E-43 1.8E-47 371.0 19.5 170 6-175 15-184 (370)
19 2c3b_A Ppiase, cyclophilin; is 100.0 6.5E-43 2.2E-47 337.2 11.5 158 8-174 4-171 (172)
20 2ose_A Probable peptidyl-proly 100.0 7.7E-42 2.6E-46 344.1 16.7 171 3-175 11-206 (234)
21 2x7k_A Peptidyl-prolyl CIS-tra 100.0 1.3E-40 4.6E-45 319.4 15.3 154 3-173 8-163 (166)
22 2fu0_A Cyclophilin, putative; 100.0 5.5E-40 1.9E-44 313.4 15.5 152 5-173 4-157 (160)
23 2a2n_A Peptidylprolyl isomeras 100.0 6.7E-40 2.3E-44 317.2 16.3 151 5-172 20-173 (176)
24 1zkc_A Peptidyl-prolyl CIS-tra 100.0 6.3E-40 2.1E-44 322.3 16.1 154 4-174 17-173 (197)
25 1w74_A Peptidyl-prolyl CIS-tra 100.0 8.8E-40 3E-44 320.0 16.8 161 4-173 21-189 (191)
26 2k7n_A Peptidyl-prolyl CIS-tra 100.0 7.2E-40 2.4E-44 323.2 15.1 155 3-174 8-164 (203)
27 2poe_A Cyclophilin-like protei 100.0 9.7E-40 3.3E-44 318.4 15.7 154 4-174 14-173 (185)
28 2b71_A Cyclophilin-like protei 100.0 1.1E-39 3.6E-44 320.6 15.7 152 5-173 37-190 (196)
29 3bo7_A Peptidyl-prolyl CIS-tra 100.0 6.9E-40 2.4E-44 323.3 14.2 153 4-173 4-170 (201)
30 2ok3_A Peptidyl-prolyl CIS-tra 100.0 1.7E-39 5.9E-44 310.2 15.4 149 8-173 2-153 (161)
31 1v9t_A Cyclophilin B; beta bar 100.0 1.6E-38 5.4E-43 304.9 14.3 151 4-173 2-163 (166)
32 2hq6_A Serologically defined c 100.0 2.4E-38 8.2E-43 308.5 14.0 154 3-174 21-178 (185)
33 3bkp_A Cyclophilin; malaria, i 100.0 8.7E-38 3E-42 314.2 14.7 153 3-173 18-190 (232)
34 1lop_A Cyclophilin A; rotamase 100.0 6.8E-38 2.3E-42 299.9 11.6 146 8-173 1-161 (164)
35 3s6m_A Peptidyl-prolyl CIS-tra 100.0 1.4E-37 4.8E-42 298.5 12.2 149 5-172 2-164 (167)
36 3rfy_A Peptidyl-prolyl CIS-tra 100.0 3.8E-34 1.3E-38 303.6 8.1 151 5-173 169-357 (369)
37 2nnz_A Hypothetical protein; b 96.2 0.0056 1.9E-07 57.7 5.9 104 11-153 32-142 (153)
38 3kop_A Uncharacterized protein 95.8 0.047 1.6E-06 52.6 10.2 33 9-43 22-55 (188)
39 1zx8_A Hypothetical protein TM 87.3 1.8 6.1E-05 39.9 8.0 103 10-153 14-123 (136)
40 3q6c_A Probable receptor YHHM; 33.1 24 0.00081 29.8 2.6 46 9-71 37-82 (83)
No 1
>1a58_A Cyclophilin; isomerase, ppiase; 1.95A {Brugia malayi} SCOP: b.62.1.1 PDB: 1a33_A 1c5f_A*
Probab=100.00 E-value=3.2e-47 Score=368.76 Aligned_cols=174 Identities=56% Similarity=0.935 Sum_probs=163.9
Q ss_pred CCCCCCCeEEEEEEeCCceeeeEEEEEcCCCChHHHHHHHHHhhcCCCCCCCCCCCccccCceeEEeecCceEEecCCCC
Q 006988 1 MSEKKNPLVFLDVSIDGDPVEKIVIELFADVVPKTAENFRALCTGEKGIGKSTGKPLHYKGTMFHRIIKGFMIQGGDFSK 80 (622)
Q Consensus 1 m~~~~np~V~fDtsigg~~~GrIvIELf~d~APktv~NFl~Lctg~~g~g~~~~k~g~YdGt~F~RVipg~vIQgGd~~~ 80 (622)
|.++.||+|||||++++.++|+|+||||+++||+||+||++||+++.|.+...++.+||+||.||||+++|||||||+..
T Consensus 1 ~~~~~~~~v~~di~i~~~~~G~i~ieL~~~~aP~t~~NF~~L~~~~~g~~~~~g~~~~Y~g~~FhRvi~~f~iQgGd~~~ 80 (177)
T 1a58_A 1 MSKKDRRRVFLDVTIDGNLAGRIVMELYNDIAPRTCNNFLMLCTGMAGTGKISGKPLHYKGSTFHRVIKNFMIQGGDFTK 80 (177)
T ss_dssp CCGGGCEEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHCTTCBCTTTCSBCCCTTCBEEEEETTTEEEECCCSS
T ss_pred CCCCCCcEEEEEEEECCEeceeEEEEEcCCCCchHHHHHHHHhcCCcCcccccCCcceeCCCEEEEEECCCEEEeCCccC
Confidence 78889999999999999999999999999999999999999999987765444566799999999999999999999988
Q ss_pred CCCCCCCcccCCcccCCCCCCCCCCCeEEEeccCCCCCCCceeEEeeccCCCCCCCceEEEEEecChHHHHHHHhcCCcc
Q 006988 81 GNGTGGESIYGGKFTDENFKLDHNGPGILSMANSGANTNGSQFFITFRRQHHLDGKHVVFGKVVKGLNIVKKIEQVGTVK 160 (622)
Q Consensus 81 g~g~gg~si~g~~~~dE~~~lkh~~~G~Vsma~sg~ds~GSqFFItL~d~p~LDgk~tVFGkVv~G~eVld~I~~~~t~~ 160 (622)
+++.++.+||+..|++|++.++|+.+|+|+||+.++|+++|||||||.++++||++|||||+||+|||||++|+.++++.
T Consensus 81 ~~g~gg~si~g~~f~dE~~~~~h~~~G~lsmAn~gp~tngSQFfIt~~~~~~LDg~~~VFG~Vv~G~dvv~~I~~~~~~~ 160 (177)
T 1a58_A 81 GDGTGGESIYGGMFDDEEFVMKHDEPFVVSMANKGPNTNGSQFFITTTPAPHLNNIHVVFGKVVSGQEVVTKIEYLKTNS 160 (177)
T ss_dssp SSSSCCCCTTSSCBCCCCCCSCCCSSSEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCBCT
T ss_pred CCCCCCCcccCCcccCcccCcccCCCeEEEEeeCCCCCceeEEEEECCCCCccCCCEEEEEEEEcCHHHHHHHHhCCCCC
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999976
Q ss_pred -CcCCcccccccCCC
Q 006988 161 -KKKASHVSSSEDSS 174 (622)
Q Consensus 161 -gkp~~~ikIsd~g~ 174 (622)
+.|..+|.|.+|+.
T Consensus 161 ~~~P~~~v~I~~~G~ 175 (177)
T 1a58_A 161 KNRPLADVVILNCGE 175 (177)
T ss_dssp TSCBSSCEEEEEEEE
T ss_pred CCcCCCCeEEEEeEE
Confidence 68889999999984
No 2
>2wfi_A Peptidyl-prolyl CIS-trans isomerase G; phosphoprotein, PRE-mRNA splicing, alternative splicing, nucleus, rotamase, cyclosporin; HET: OCS; 0.75A {Homo sapiens} PDB: 2wfj_A* 2gw2_A
Probab=100.00 E-value=5.5e-47 Score=367.75 Aligned_cols=174 Identities=56% Similarity=0.950 Sum_probs=162.8
Q ss_pred CCCC-CCCeEEEEEEeCCceeeeEEEEEcCCCChHHHHHHHHHhhcCCCCCCCCCCCccccCceeEEeecCceEEecCCC
Q 006988 1 MSEK-KNPLVFLDVSIDGDPVEKIVIELFADVVPKTAENFRALCTGEKGIGKSTGKPLHYKGTMFHRIIKGFMIQGGDFS 79 (622)
Q Consensus 1 m~~~-~np~V~fDtsigg~~~GrIvIELf~d~APktv~NFl~Lctg~~g~g~~~~k~g~YdGt~F~RVipg~vIQgGd~~ 79 (622)
|.++ .||+|||||++++.++|+|+||||+++||+||+||++||+|+.|.+...++.+||+||.||||+++|||||||+.
T Consensus 3 ~~~~~~~~~vf~di~i~~t~~G~i~ieL~~~~aP~t~~NF~~L~~g~~g~~~~~~~~~~Y~g~~FhRvi~~f~iQgGd~~ 82 (179)
T 2wfi_A 3 MGIKVQRPRCFFDIAINNQPAGRVVFELFSDVCPKTCENFRCLCTGEKGTGKSTQKPLHYKSCLFHRVVKDFMVQGGDFS 82 (179)
T ss_dssp -----CCCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHCTTCBCTTTCSBSCCTTCBEEEEETTTEEEECCTT
T ss_pred CCcCCCCCeEEEEEEECCccceEEEEEEcCCCCChHHHHHHHHhcCCcCcccccccCCeECCCEEEEEECCCEEEccccc
Confidence 6666 699999999999999999999999999999999999999999888777778999999999999999999999998
Q ss_pred CCCCCCCCcccCCcccCCCCCCCCCCCeEEEeccCCCCCCCceeEEeeccCCCCCCCceEEEEEecChHHHHHHHhcCCc
Q 006988 80 KGNGTGGESIYGGKFTDENFKLDHNGPGILSMANSGANTNGSQFFITFRRQHHLDGKHVVFGKVVKGLNIVKKIEQVGTV 159 (622)
Q Consensus 80 ~g~g~gg~si~g~~~~dE~~~lkh~~~G~Vsma~sg~ds~GSqFFItL~d~p~LDgk~tVFGkVv~G~eVld~I~~~~t~ 159 (622)
.+++.++++||+..|++|++.++|+.+|+|+||+.++|+++|||||||.++++||++|||||+||+|||||++|+.++++
T Consensus 83 ~~~g~gg~si~g~~f~dE~~~~~h~~~G~lsMAn~gp~tngSQFfIt~~~~~~LDg~~tVFG~Vv~G~dvv~~I~~~~t~ 162 (179)
T 2wfi_A 83 EGNGRGGESIYGGFFEDESFAVKHNKEFLLSMANRGKDTNGSQFFITTKPTPHLDGHHVVFGQVISGQEVVREIENQKTD 162 (179)
T ss_dssp TSSSSCCCCTTSSCBCCCCCCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTCCBC
T ss_pred CCCCCCCCcccCCcccccccCcCcCCCeEEEEEeCCCCCcceEEEEEcCCCcccCCCeeEEEEEeCCHHHHHHHHcCCCC
Confidence 88999999999999999999999999999999999999999999999999999999999999999999999999999987
Q ss_pred c-CcCCcccccccCCC
Q 006988 160 K-KKKASHVSSSEDSS 174 (622)
Q Consensus 160 ~-gkp~~~ikIsd~g~ 174 (622)
. +.|..+|.|.+|+.
T Consensus 163 ~~~~P~~~v~I~~~G~ 178 (179)
T 2wfi_A 163 AASKPFAEVRILSCGE 178 (179)
T ss_dssp TTSCBSSCEEEEEEEE
T ss_pred CCCCCCCCeEEEeCee
Confidence 5 68899999999974
No 3
>2he9_A NK-tumor recognition protein; cyclosporin, isomerase, membrane, repeat, rotamase, peptidylprolyl isomerase, structural genomics; 2.00A {Homo sapiens}
Probab=100.00 E-value=1.6e-46 Score=368.03 Aligned_cols=175 Identities=51% Similarity=0.909 Sum_probs=162.9
Q ss_pred CCCCCCCeEEEEEEeCCceeeeEEEEEcCCCChHHHHHHHHHhhcCCCCCCCCCCCccccCceeEEeecCceEEecCCCC
Q 006988 1 MSEKKNPLVFLDVSIDGDPVEKIVIELFADVVPKTAENFRALCTGEKGIGKSTGKPLHYKGTMFHRIIKGFMIQGGDFSK 80 (622)
Q Consensus 1 m~~~~np~V~fDtsigg~~~GrIvIELf~d~APktv~NFl~Lctg~~g~g~~~~k~g~YdGt~F~RVipg~vIQgGd~~~ 80 (622)
|.+..||+|||||+|++.++|+|+||||+++||+||+||++||+|+.|.+...++.+||+|+.||||+++|||||||+..
T Consensus 14 ~~~~~~~~vf~di~i~~t~~G~I~ieL~~~~aP~t~~NF~~L~~g~~g~~~~~~k~~~Y~g~~FhRVi~~fmiQgGd~~~ 93 (192)
T 2he9_A 14 LVPRGSPQCHFDIEINREPVGRIMFQLFSDICPKTCKNFLCLCSGEKGLGKTTGKKLCYKGSTFHRVVKNFMIQGGDFSE 93 (192)
T ss_dssp -----CCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHCTTCBCTTTCSBSCCTTCBEEEEETTTEEEECCTTT
T ss_pred ccccCCCeEEEEEEECCEecceEEEEEcCCCCchHHHHHHHHhcCCCCcccccccCCeECCCEEEEEECCCEEEcCcccC
Confidence 45678999999999999999999999999999999999999999998887777789999999999999999999999988
Q ss_pred CCCCCCCcccCCcccCCCCCCCCCCCeEEEeccCCCCCCCceeEEeeccCCCCCCCceEEEEEecChHHHHHHHhcCCcc
Q 006988 81 GNGTGGESIYGGKFTDENFKLDHNGPGILSMANSGANTNGSQFFITFRRQHHLDGKHVVFGKVVKGLNIVKKIEQVGTVK 160 (622)
Q Consensus 81 g~g~gg~si~g~~~~dE~~~lkh~~~G~Vsma~sg~ds~GSqFFItL~d~p~LDgk~tVFGkVv~G~eVld~I~~~~t~~ 160 (622)
+++.++++||+..|++|++.++|+.+|+|+||+.++++++|||||||.++++||++|||||+||+|||||++|+.++++.
T Consensus 94 ~~G~gg~siyg~~f~dE~~~l~h~~~G~lsMAn~gp~tngSQFFIt~~~~~~LDg~~tVFG~Vv~Gmdvv~~I~~~~t~~ 173 (192)
T 2he9_A 94 GNGKGGESIYGGYFKDENFILKHDRAFLLSMANRGKHTNGSQFFITTKPAPHLDGVHVVFGLVISGFEVIEQIENLKTDA 173 (192)
T ss_dssp SSSSCCCCTTSSCBCCCCCCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCBCT
T ss_pred CCCCCCCcccCCcccCccccCCCCCCeEEEEEeCCCCCcceEEEEEcCCCcccCCCccEEEEEEeCHHHHHHHHcCCcCC
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999875
Q ss_pred -CcCCcccccccCCCC
Q 006988 161 -KKKASHVSSSEDSSD 175 (622)
Q Consensus 161 -gkp~~~ikIsd~g~~ 175 (622)
+.|..+|.|.+|+..
T Consensus 174 ~~~P~~~v~I~~~g~l 189 (192)
T 2he9_A 174 ASRPYADVRVIDCGVL 189 (192)
T ss_dssp TSCBSSCEEEEEEEEC
T ss_pred CCCCcCCeEEEEeEEE
Confidence 688999999999854
No 4
>2poy_A Peptidyl-prolyl CIS-trans isomerase; isomerase-immunosuppressant complex, immunosuppressant, cyclophilin, isomerase, S genomics, structural genomics consortium; HET: BMT; 1.80A {Cryptosporidium parvum iowa II} PDB: 2plu_A*
Probab=100.00 E-value=4.5e-46 Score=363.27 Aligned_cols=172 Identities=59% Similarity=0.992 Sum_probs=159.4
Q ss_pred CCCCCCeEEEEEEeCCceeeeEEEEEcCCCChHHHHHHHHHhhcCCCCCCCCCCCccccCceeEEeecCceEEecCCCCC
Q 006988 2 SEKKNPLVFLDVSIDGDPVEKIVIELFADVVPKTAENFRALCTGEKGIGKSTGKPLHYKGTMFHRIIKGFMIQGGDFSKG 81 (622)
Q Consensus 2 ~~~~np~V~fDtsigg~~~GrIvIELf~d~APktv~NFl~Lctg~~g~g~~~~k~g~YdGt~F~RVipg~vIQgGd~~~g 81 (622)
....||+|||||++++.++|+|+||||+++||+||+||++||+++.|.+. .+++++|+|+.||||+++|||||||+..+
T Consensus 15 ~~~~~~~v~~di~i~~t~~G~I~ieL~~~~aP~t~~NF~~L~~g~~g~~~-~~~~~~Y~g~~FhRVi~~f~iQgGd~~~~ 93 (186)
T 2poy_A 15 YFQGNPVVYFDISIGQTPAGRITMELFADKVPITAENFRALCTGEKGMGQ-SGKPLCYTGSFFHRIIPQFMIQGGDFTRG 93 (186)
T ss_dssp ---CCCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTTTCBCT-TSSBSCCTTCBCCEEETTTEEEECCTTTS
T ss_pred ccCCCCEEEEEEeECCEecccEEEEEeCCCCcHHHHHHHHHhcccCCccc-cCccceECCCEEEEEeCCCEEEeCCCCCC
Confidence 34679999999999999999999999999999999999999998766543 45777899999999999999999999888
Q ss_pred CCCCCCcccCCcccCCCCCCCCCCCeEEEeccCCCCCCCceeEEeeccCCCCCCCceEEEEEecChHHHHHHHhcCCccC
Q 006988 82 NGTGGESIYGGKFTDENFKLDHNGPGILSMANSGANTNGSQFFITFRRQHHLDGKHVVFGKVVKGLNIVKKIEQVGTVKK 161 (622)
Q Consensus 82 ~g~gg~si~g~~~~dE~~~lkh~~~G~Vsma~sg~ds~GSqFFItL~d~p~LDgk~tVFGkVv~G~eVld~I~~~~t~~g 161 (622)
++.++.+||+..|++|++.++|+.+|+|+||+.++|+++|||||||.++++||++|+|||+||+|||||++|+.+++..+
T Consensus 94 ~G~gg~si~g~~f~dE~~~l~h~~~G~lsMAn~gpntngSQFFIt~~~~~~LDg~~tVFG~Vv~Gmdvv~~I~~~~t~~~ 173 (186)
T 2poy_A 94 DGTGGESIYGSKFRDENFVYTHDAPFLLSMANAGPNTNGSQFFITTVPCPWLDGKHVVFGKVLEGMEVVKSIEKCGSQNG 173 (186)
T ss_dssp SSSCCCCTTC-CBCCCCCCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHHTCCTTS
T ss_pred CCCCCCccCCCcccCcccccccCCCcEEEEeeCCCCCcccEEEEECCCCcccCCCeeEEEEEecCHHHHHHHHhCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999989
Q ss_pred cCCcccccccCCC
Q 006988 162 KKASHVSSSEDSS 174 (622)
Q Consensus 162 kp~~~ikIsd~g~ 174 (622)
.|..+|.|.+|+.
T Consensus 174 ~P~~~v~I~~cG~ 186 (186)
T 2poy_A 174 KPTKSVCITASGV 186 (186)
T ss_dssp CCSSCEEEEEEEC
T ss_pred CCCCCEEEEeCCC
Confidence 9999999999973
No 5
>2igv_A Peptidyl-prolyl CIS-trans isomerase 3; rotamase; 1.67A {Caenorhabditis elegans} SCOP: b.62.1.1 PDB: 1e3b_A 1e8k_A 1dyw_A 2igw_A 2hqj_A
Probab=100.00 E-value=5.7e-46 Score=358.81 Aligned_cols=169 Identities=60% Similarity=1.042 Sum_probs=159.6
Q ss_pred CCCeEEEEEEeCCceeeeEEEEEcCCCChHHHHHHHHHhhcCCCCCCCCCCCccccCceeEEeecCceEEecCCCCCCCC
Q 006988 5 KNPLVFLDVSIDGDPVEKIVIELFADVVPKTAENFRALCTGEKGIGKSTGKPLHYKGTMFHRIIKGFMIQGGDFSKGNGT 84 (622)
Q Consensus 5 ~np~V~fDtsigg~~~GrIvIELf~d~APktv~NFl~Lctg~~g~g~~~~k~g~YdGt~F~RVipg~vIQgGd~~~g~g~ 84 (622)
.||+|||||++++.++|+|+||||+++||+||+||++||++++|.+ ..++++||+||.||||+++|||||||+..++++
T Consensus 2 ~~~~v~~di~i~~~~~G~i~ieL~~~~aP~t~~NF~~L~~~~~g~g-~~~~~~~Y~g~~FhRvi~~f~iQgGd~~~~~G~ 80 (173)
T 2igv_A 2 SRSKVFFDITIGGKASGRIVMELYDDVVPKTAGNFRALCTGENGIG-KSGKPLHFKGSKFHRIIPNFMIQGGDFTRGNGT 80 (173)
T ss_dssp CCCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTTTCBC-TTSSBSCCTTCBCCEEETTTEEEECCTTTSSSS
T ss_pred CCCEEEEEEEECCEecceEEEEEeCCCCcHHHHHHHHHhcCCCCCC-ccCccceECCCEEEEEECCCEEEcCCCCCCCCC
Confidence 3899999999999999999999999999999999999999876644 235677999999999999999999999888999
Q ss_pred CCCcccCCcccCCCCCCCCCCCeEEEeccCCCCCCCceeEEeeccCCCCCCCceEEEEEecChHHHHHHHhcCCccCcCC
Q 006988 85 GGESIYGGKFTDENFKLDHNGPGILSMANSGANTNGSQFFITFRRQHHLDGKHVVFGKVVKGLNIVKKIEQVGTVKKKKA 164 (622)
Q Consensus 85 gg~si~g~~~~dE~~~lkh~~~G~Vsma~sg~ds~GSqFFItL~d~p~LDgk~tVFGkVv~G~eVld~I~~~~t~~gkp~ 164 (622)
++.+||+..|++|++.++|+.+|+|+||+.++|+++|||||||.++++||++|+|||+||+||+||++|+.+++..+.|.
T Consensus 81 gg~siyg~~f~dE~~~l~h~~~G~lsmAn~gp~tngSQFfIt~~~~~~LDg~~~vFG~Vv~G~dvv~~I~~~~t~~~~P~ 160 (173)
T 2igv_A 81 GGESIYGEKFPDENFKEKHTGPGVLSMANAGPNTNGSQFFLCTVKTEWLDGKHVVFGRVVEGLDVVKAVESNGSQSGKPV 160 (173)
T ss_dssp CCCBTTBSCBCCCCCCSCCCSTTEEEECCSSTTCBSSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTTCCTTSCCS
T ss_pred CCCccCCCcccCcccccCCCCCeEEEEeeCCCCCcceEEEEEcCCccccCCCeeEEEEEecCHHHHHHHHhCCCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999989999
Q ss_pred cccccccCCC
Q 006988 165 SHVSSSEDSS 174 (622)
Q Consensus 165 ~~ikIsd~g~ 174 (622)
.+|.|.+|+.
T Consensus 161 ~~v~I~~~g~ 170 (173)
T 2igv_A 161 KDCMIADCGQ 170 (173)
T ss_dssp SCEEEEEEEE
T ss_pred CCEEEEEeEE
Confidence 9999999984
No 6
>1qng_A Peptidyl-prolyl CIS-trans isomerase; isomerase-immunosuppressant complex, cyclophilin-cyclosporin complex, immunosuppressant, cyclophilin; HET: BMT; 2.1A {Plasmodium falciparum} SCOP: b.62.1.1 PDB: 1qnh_A*
Probab=100.00 E-value=1.5e-45 Score=355.01 Aligned_cols=168 Identities=57% Similarity=0.968 Sum_probs=157.1
Q ss_pred CCCeEEEEEEeCCceeeeEEEEEcCCCChHHHHHHHHHhhcCCCCCCCCCCCccccCceeEEeecCceEEecCCCCCCCC
Q 006988 5 KNPLVFLDVSIDGDPVEKIVIELFADVVPKTAENFRALCTGEKGIGKSTGKPLHYKGTMFHRIIKGFMIQGGDFSKGNGT 84 (622)
Q Consensus 5 ~np~V~fDtsigg~~~GrIvIELf~d~APktv~NFl~Lctg~~g~g~~~~k~g~YdGt~F~RVipg~vIQgGd~~~g~g~ 84 (622)
.||+|||||++++.++|+|+||||+++||+||+||++||++. |.+ ..+++++|+||.||||+++|||||||+..++++
T Consensus 2 ~~~~v~~di~i~~~~~G~i~ieL~~~~aP~t~~NF~~L~~~~-g~g-~~~~~~~Y~g~~FhRvi~~f~iQgGd~~~~~g~ 79 (170)
T 1qng_A 2 KRSKVFFDISIDNSNAGRIIFELFSDITPRTCENFRALCTGE-KIG-SRGKNLHYKNSIFHRIIPQFMCQGGDITNGNGS 79 (170)
T ss_dssp CSCEEEEEEEESSSEEEEEEEEECTTTCHHHHHHHHHHHHTC-EEC-TTSSEECCTTCBCCEEETTTEEEECCTTTSSSS
T ss_pred CCCEEEEEEeECCEeceeEEEEEcCCCCCHHHHHHHHHhccC-CcC-ccCccceECCCEEEEEECCCEEEcCCccCCCCC
Confidence 589999999999999999999999999999999999999864 322 234666799999999999999999999888999
Q ss_pred CCCcccCCcccCCCCCCCCCCCeEEEeccCCCCCCCceeEEeeccCCCCCCCceEEEEEecChHHHHHHHhcCCccCcCC
Q 006988 85 GGESIYGGKFTDENFKLDHNGPGILSMANSGANTNGSQFFITFRRQHHLDGKHVVFGKVVKGLNIVKKIEQVGTVKKKKA 164 (622)
Q Consensus 85 gg~si~g~~~~dE~~~lkh~~~G~Vsma~sg~ds~GSqFFItL~d~p~LDgk~tVFGkVv~G~eVld~I~~~~t~~gkp~ 164 (622)
++.+||+..|++|++.++|+.+|+|+||+.++|+++|||||||.++++||++|+|||+||+|||||++|+.+++..+.|.
T Consensus 80 gg~si~g~~f~dE~~~l~h~~~G~lsmAn~gp~tngSQFfIt~~~~~~Ldg~~~vFG~Vv~G~dvv~~I~~~~t~~~~P~ 159 (170)
T 1qng_A 80 GGESIYGRSFTDENFNMKHDQPGLLSMANAGPNTNSSQFFITLVPCPWLDGKHVVFGKVIEGMNVVREMEKEGAKSGYVK 159 (170)
T ss_dssp CCCBTTBSCBCCCCCCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTTCCTTCCCS
T ss_pred CCccccCCcccccccccccCCCCEEEEeecCCCCcccEEEEECCCCcccCCCeeEEEEEECCHHHHHHHHhCCCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999888999
Q ss_pred cccccccCCC
Q 006988 165 SHVSSSEDSS 174 (622)
Q Consensus 165 ~~ikIsd~g~ 174 (622)
.+|.|.+|+.
T Consensus 160 ~~v~I~~cG~ 169 (170)
T 1qng_A 160 RSVVITDCGE 169 (170)
T ss_dssp SCEEEEEEEE
T ss_pred CCeEEEecee
Confidence 9999999974
No 7
>1mzw_A Cyclophilin H, U-snRNP-ASSOCIATED cyclophilin; cyclophilin, peptidyl-prolyl-CIS/trans isomerase, spliceosome, U4/U6-60K protein, WD protein; 2.00A {Homo sapiens} SCOP: b.62.1.1 PDB: 1qoi_A
Probab=100.00 E-value=2.5e-45 Score=355.56 Aligned_cols=170 Identities=60% Similarity=0.959 Sum_probs=158.5
Q ss_pred CCCCCCeEEEEEEeCCceeeeEEEEEcCCCChHHHHHHHHHhhcCCCCCCCCCCCccccCceeEEeecCceEEecCCCCC
Q 006988 2 SEKKNPLVFLDVSIDGDPVEKIVIELFADVVPKTAENFRALCTGEKGIGKSTGKPLHYKGTMFHRIIKGFMIQGGDFSKG 81 (622)
Q Consensus 2 ~~~~np~V~fDtsigg~~~GrIvIELf~d~APktv~NFl~Lctg~~g~g~~~~k~g~YdGt~F~RVipg~vIQgGd~~~g 81 (622)
.+..||+|||||++++..+|+|+||||+++||+||+||++||+++.|. .+++++|+|+.||||+++|||||||+..+
T Consensus 6 ~~~~~~~v~~di~i~~t~~G~i~ieL~~~~aP~t~~NF~~L~~~~~g~---~g~~~~Y~g~~FhRvi~~f~iQgGd~~~~ 82 (177)
T 1mzw_A 6 SSPVNPVVFFDVSIGGQEVGRMKIELFADVVPKTAENFRQFCTGEFRK---DGVPIGYKGSTFHRVIKDFMIQGGDFVNG 82 (177)
T ss_dssp CCCCCCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTCCEE---TTEECSSTTCBCCEEETTTEEEECCTTTS
T ss_pred cCCCCCEEEEEEEECCeeceeEEEEEcCCCCcHHHHHHHHHHhcccCC---cCccceECCCEEEEEECCCEEEcCCcccC
Confidence 456799999999999999999999999999999999999999887543 23566799999999999999999999888
Q ss_pred CCCCCCcccCCcccCCCCCCCCCCCeEEEeccCCCCCCCceeEEeeccCCCCCCCceEEEEEecChHHHHHHHhcCC-cc
Q 006988 82 NGTGGESIYGGKFTDENFKLDHNGPGILSMANSGANTNGSQFFITFRRQHHLDGKHVVFGKVVKGLNIVKKIEQVGT-VK 160 (622)
Q Consensus 82 ~g~gg~si~g~~~~dE~~~lkh~~~G~Vsma~sg~ds~GSqFFItL~d~p~LDgk~tVFGkVv~G~eVld~I~~~~t-~~ 160 (622)
++.++.+||+..|++|++.++|+.+|+|+||+.++++++|||||||.++++||++|+|||+||+||+||++|+.+++ ..
T Consensus 83 ~G~gg~si~g~~f~dE~~~l~h~~~G~lsmAn~gp~tngSQFfIt~~~~~~LDg~~~VFG~Vv~G~dvv~~I~~~~t~~~ 162 (177)
T 1mzw_A 83 DGTGVASIYRGPFADENFKLRHSAPGLLSMANSGPSTNGCQFFITCSKCDWLDGKHVVFGKIIDGLLVMRKIENVPTGPN 162 (177)
T ss_dssp SSCCCCCTTSSCBCCCCCCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCBCGG
T ss_pred CCCCCCccCCCcccCcccccccCCCCEEEEccCCCCCcceEEEEECCCCCccCCCeeEEEEEeCCHHHHHHHHhCCcCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999 45
Q ss_pred CcCCcccccccCCC
Q 006988 161 KKKASHVSSSEDSS 174 (622)
Q Consensus 161 gkp~~~ikIsd~g~ 174 (622)
+.|..+|.|.+|+.
T Consensus 163 ~~P~~~v~I~~cG~ 176 (177)
T 1mzw_A 163 NKPKLPVVISQCGE 176 (177)
T ss_dssp GCBSSCEEEEEEEE
T ss_pred CCCCCCEEEEecee
Confidence 78999999999974
No 8
>3pmp_A Cyclophilin A; peptidyl prolyl isomerase, isomerase-immunosuppressant compl; HET: BMT; 1.47A {Moniliophthora perniciosa} SCOP: b.62.1.1 PDB: 3o7t_A
Probab=100.00 E-value=5.9e-45 Score=348.89 Aligned_cols=162 Identities=52% Similarity=0.910 Sum_probs=155.1
Q ss_pred CCCeEEEEEEeCCceeeeEEEEEcCCCChHHHHHHHHHhhcCCCCCCCCCCCcc-ccCceeEEeecCceEEecCCCCCCC
Q 006988 5 KNPLVFLDVSIDGDPVEKIVIELFADVVPKTAENFRALCTGEKGIGKSTGKPLH-YKGTMFHRIIKGFMIQGGDFSKGNG 83 (622)
Q Consensus 5 ~np~V~fDtsigg~~~GrIvIELf~d~APktv~NFl~Lctg~~g~g~~~~k~g~-YdGt~F~RVipg~vIQgGd~~~g~g 83 (622)
.||+|||||++++.++|+|+||||+++||+||+||++||+|+. +| |+|+.||||+++|||||||+..+++
T Consensus 1 ~~p~vf~di~i~~t~~G~i~ieL~~~~aP~t~~nF~~L~~g~~---------g~~Y~g~~fhRvi~~f~iQgGd~~~~~g 71 (164)
T 3pmp_A 1 AMANVFFNISINDKPEGRIVFKLYDEAVPKTAKNFRELATGQH---------GFGYKDSIFHRVIPQFMLQGGDFTRHNG 71 (164)
T ss_dssp CCCCEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTTT---------SCSSTTCBEEEEETTTEEEECCTTTSSS
T ss_pred CCCEEEEEEEECCEEeeEEEEEEeCCCCcHHHHHHHHHhcccC---------CCcccCCEEEEEECCCeEEeCCCCCCCC
Confidence 3899999999999999999999999999999999999998754 46 9999999999999999999888999
Q ss_pred CCCCcccCCcccCCCCCCCCCCCeEEEeccCCCCCCCceeEEeeccCCCCCCCceEEEEEecChHHHHHHHhcCCccCcC
Q 006988 84 TGGESIYGGKFTDENFKLDHNGPGILSMANSGANTNGSQFFITFRRQHHLDGKHVVFGKVVKGLNIVKKIEQVGTVKKKK 163 (622)
Q Consensus 84 ~gg~si~g~~~~dE~~~lkh~~~G~Vsma~sg~ds~GSqFFItL~d~p~LDgk~tVFGkVv~G~eVld~I~~~~t~~gkp 163 (622)
.++.++|+.+|++|++.++|+.+|+|+||+.++++++|||||+|.++++||++|+|||+|++||+||++|+.++++.+.|
T Consensus 72 ~gg~si~g~~~~dE~~~l~h~~~G~lsma~~g~~t~~SQFfIt~~~~~~Ld~~~~vFG~Vv~G~~vv~~I~~~~~~~~~P 151 (164)
T 3pmp_A 72 TGGKSIYGEKFADENFQVKHTKPGLLSMANAGANTNGSQFFITTVPTSWLDGKHVVFGEVIEGLDIVRKVEGKGSASGKT 151 (164)
T ss_dssp SCCCBTTBSCBCCCCCCSCCCSTTEEEECBSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTTCCTTCCC
T ss_pred CCCcccCCccccccccccCcCCCcEEEEeeCCCCCcccEEEEECCCChhhCCCccEEEEEeCCHHHHHHHHhCCCCCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcccccccCCCC
Q 006988 164 ASHVSSSEDSSD 175 (622)
Q Consensus 164 ~~~ikIsd~g~~ 175 (622)
..+|+|.+|+..
T Consensus 152 ~~~v~I~~cg~l 163 (164)
T 3pmp_A 152 NATIKITDCGTV 163 (164)
T ss_dssp SSCEEEEEEEEC
T ss_pred ccCEEEEeCeEE
Confidence 999999999853
No 9
>2z6w_A Peptidyl-prolyl CIS-trans isomerase; isomerase-immunosuppressant complex, immunosuppressant, cyclophilin D; HET: BMT MLE CIT; 0.96A {Homo sapiens} SCOP: b.62.1.1 PDB: 3rcg_A* 3r49_A* 3r54_A 3r56_A* 3r57_A* 3r59_A* 3rcf_A* 3r4g_A* 3rci_X* 3rck_X* 3rcl_A* 3rd9_X* 3rda_X* 3rdb_A* 3rdc_A* 2bit_X 2biu_X 3qyu_A 3k0m_A 1ak4_A* ...
Probab=100.00 E-value=7.6e-45 Score=348.51 Aligned_cols=160 Identities=59% Similarity=1.024 Sum_probs=153.4
Q ss_pred CCeEEEEEEeCCceeeeEEEEEcCCCChHHHHHHHHHhhcCCCCCCCCCCCcc-ccCceeEEeecCceEEecCCCCCCCC
Q 006988 6 NPLVFLDVSIDGDPVEKIVIELFADVVPKTAENFRALCTGEKGIGKSTGKPLH-YKGTMFHRIIKGFMIQGGDFSKGNGT 84 (622)
Q Consensus 6 np~V~fDtsigg~~~GrIvIELf~d~APktv~NFl~Lctg~~g~g~~~~k~g~-YdGt~F~RVipg~vIQgGd~~~g~g~ 84 (622)
||+|||||++++.++|+|+||||+++||+||+||++||+|+. +| |+|+.||||+++||||||++..+++.
T Consensus 3 ~~~v~~di~i~~t~~G~i~ieL~~~~aP~t~~NF~~L~~g~~---------g~~Y~g~~fhRvi~~f~iQgGd~~~~~g~ 73 (165)
T 2z6w_A 3 NPLVYLDVDANGKPLGRVVLELKADVVPKTAENFRALCTGEK---------GFGYKGSTFHRVIPSFMCQAGDFTNHNGT 73 (165)
T ss_dssp CCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTTT---------SCCSTTCBEEEEETTTEEEECCTTTSSSS
T ss_pred CCEEEEEEEECCEeeeEEEEEEeCCCCcHHHHHHHHHhccCC---------CccCcCCEEEEEECCCEEEeCCccCCCCC
Confidence 899999999999999999999999999999999999998753 47 99999999999999999999888899
Q ss_pred CCCcccCCcccCCCCCCCCCCCeEEEeccCCCCCCCceeEEeeccCCCCCCCceEEEEEecChHHHHHHHhcCCccCcCC
Q 006988 85 GGESIYGGKFTDENFKLDHNGPGILSMANSGANTNGSQFFITFRRQHHLDGKHVVFGKVVKGLNIVKKIEQVGTVKKKKA 164 (622)
Q Consensus 85 gg~si~g~~~~dE~~~lkh~~~G~Vsma~sg~ds~GSqFFItL~d~p~LDgk~tVFGkVv~G~eVld~I~~~~t~~gkp~ 164 (622)
++.+||+..|++|++.++|..+|+|+||+.++++++|||||+|.++++||++|+|||+|++||+||++|+.+++..+.|.
T Consensus 74 gg~si~g~~f~dE~~~l~h~~~G~lsmA~~gp~s~~SQFfI~~~~~~~Ldg~~~vFG~Vv~G~dvv~~I~~~~~~~~~P~ 153 (165)
T 2z6w_A 74 GGKSIYGSRFPDENFTLKHVGPGVLSMANAGPNTNGSQFFICTIKTDWLDGKHVVFGHVIEGMDVVKKIESFGSKSGRTS 153 (165)
T ss_dssp CCCBTTBSCBCCCCCCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHHTCCTTSCCS
T ss_pred CCCcccCCcccCcccccccCCCCEEEEeeCCCCCcccEEEEEcCCCcccCCCeeEEEEEEcCHHHHHHHHhCCCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999889999
Q ss_pred cccccccCCC
Q 006988 165 SHVSSSEDSS 174 (622)
Q Consensus 165 ~~ikIsd~g~ 174 (622)
.+|.|.+|+.
T Consensus 154 ~~v~I~~~g~ 163 (165)
T 2z6w_A 154 KKIVITDCGQ 163 (165)
T ss_dssp SCEEEEEEEE
T ss_pred CcEEEEEeEE
Confidence 9999999974
No 10
>2r99_A Peptidyl-prolyl CIS-trans isomerase E; CIS-trans isomerization, structural genomics consortium, SGC, alternative splicing, mRNA processing; 1.61A {Homo sapiens} SCOP: b.62.1.1 PDB: 3uch_A 1zmf_A
Probab=100.00 E-value=8.7e-45 Score=350.58 Aligned_cols=163 Identities=55% Similarity=0.923 Sum_probs=154.8
Q ss_pred CCCCeEEEEEEeCCceeeeEEEEEcCCCChHHHHHHHHHhhcCCCCCCCCCCCcc-ccCceeEEeecCceEEecCCCCCC
Q 006988 4 KKNPLVFLDVSIDGDPVEKIVIELFADVVPKTAENFRALCTGEKGIGKSTGKPLH-YKGTMFHRIIKGFMIQGGDFSKGN 82 (622)
Q Consensus 4 ~~np~V~fDtsigg~~~GrIvIELf~d~APktv~NFl~Lctg~~g~g~~~~k~g~-YdGt~F~RVipg~vIQgGd~~~g~ 82 (622)
..||+|||||++++..+|+|+||||+++||+||+||++||+|+. +| |+|+.||||+++||||||++..++
T Consensus 9 ~~~~~v~~di~i~~t~~G~i~ieL~~~~aP~t~~NF~~L~~g~~---------g~~Y~g~~FhRvi~~f~iQgGd~~~~~ 79 (173)
T 2r99_A 9 RSNPQVYMDIKIGNKPAGRIQMLLRSDVVPMTAENFRCLCTHEK---------GFGFKGSSFHRIIPQFMCQGGDFTNHN 79 (173)
T ss_dssp -CCCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTTT---------SCCSTTCBEEEEETTTEEEECCTTTSS
T ss_pred cCCCEEEEEEEECCccceeEEEEECCCCCcHHHHHHHHHhcccC---------CceecCCEEEEeeCCCEEEeCCcCCCC
Confidence 46899999999999999999999999999999999999998753 35 999999999999999999998888
Q ss_pred CCCCCcccCCcccCCCCCCCCCCCeEEEeccCCCCCCCceeEEeeccCCCCCCCceEEEEEecChHHHHHHHhcCCccCc
Q 006988 83 GTGGESIYGGKFTDENFKLDHNGPGILSMANSGANTNGSQFFITFRRQHHLDGKHVVFGKVVKGLNIVKKIEQVGTVKKK 162 (622)
Q Consensus 83 g~gg~si~g~~~~dE~~~lkh~~~G~Vsma~sg~ds~GSqFFItL~d~p~LDgk~tVFGkVv~G~eVld~I~~~~t~~gk 162 (622)
+.++.+||+..|++|++.++|+.+|+|+||+.++|+++|||||||.++++||++|+|||+|++||+||++|+.++++.+.
T Consensus 80 g~gg~si~g~~f~dE~~~l~h~~~G~lsmA~~gp~t~gSQFfIt~~~~~~LDg~~tVFG~Vv~G~dvv~~I~~~~~~~~~ 159 (173)
T 2r99_A 80 GTGGKSIYGKKFDDENFILKHTGPGLLSMANSGPNTNGSQFFLTCDKTDWLDGKHVVFGEVTEGLDVLRQIEAQGSKDGK 159 (173)
T ss_dssp SSCCCBTTBSCBCCCCCCSCCCSSSEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTTCCTTCC
T ss_pred CCCCCccCCCcccCcccCcccCCCcEEEEccCCCCCcccEEEEECCCCCccCCCeeEEEEEEcCHHHHHHHHhCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999899
Q ss_pred CCcccccccCCCC
Q 006988 163 KASHVSSSEDSSD 175 (622)
Q Consensus 163 p~~~ikIsd~g~~ 175 (622)
|...|.|.+|+..
T Consensus 160 P~~~v~I~~cG~l 172 (173)
T 2r99_A 160 PKQKVIIADCGEY 172 (173)
T ss_dssp CSSCEEEEEEEEC
T ss_pred CCCCeEEEEeeeE
Confidence 9999999999853
No 11
>2cmt_A Peptidyl-prolyl CIS-trans isomerase E; rotamase activity, rotamase, RNA-binding, cyclosporin, cyclophilin, beta-barrel; 1.50A {Schistosoma mansoni} PDB: 2ck1_A
Probab=100.00 E-value=9.8e-45 Score=349.88 Aligned_cols=162 Identities=58% Similarity=0.929 Sum_probs=154.2
Q ss_pred CCCCeEEEEEEeCCceeeeEEEEEcCCCChHHHHHHHHHhhcCCCCCCCCCCCcc-ccCceeEEeecCceEEecCCCCCC
Q 006988 4 KKNPLVFLDVSIDGDPVEKIVIELFADVVPKTAENFRALCTGEKGIGKSTGKPLH-YKGTMFHRIIKGFMIQGGDFSKGN 82 (622)
Q Consensus 4 ~~np~V~fDtsigg~~~GrIvIELf~d~APktv~NFl~Lctg~~g~g~~~~k~g~-YdGt~F~RVipg~vIQgGd~~~g~ 82 (622)
..||+|||||++++..+|+|+||||+++||+||+||++||++.. +| |+|+.||||+++||||||++..++
T Consensus 8 ~~~~~v~~di~i~~t~~G~i~ieL~~~~aP~t~~NF~~L~~~~~---------g~~Y~g~~FhRvi~~f~iQgGd~~~~~ 78 (172)
T 2cmt_A 8 RNLPRVFFDIRIGNGDAGRIVMELRSDIVPRTAENFRALCTGER---------GFGYHNCCFHRVIPQFMCQGGDFVKGD 78 (172)
T ss_dssp -CCCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTTT---------SCSSTTCBEEEEETTTEEEECCTTTSS
T ss_pred CCCCEEEEEEEECCeecceEEEEEcCCCCCHHHHHHHHHhccCC---------CceECCCEEEEEECCCEEEcCCccCCC
Confidence 46899999999999999999999999999999999999998643 46 999999999999999999998888
Q ss_pred CCCCCcccCCcccCCCCCCCCCCCeEEEeccCCCCCCCceeEEeeccCCCCCCCceEEEEEecChHHHHHHHhcCCccCc
Q 006988 83 GTGGESIYGGKFTDENFKLDHNGPGILSMANSGANTNGSQFFITFRRQHHLDGKHVVFGKVVKGLNIVKKIEQVGTVKKK 162 (622)
Q Consensus 83 g~gg~si~g~~~~dE~~~lkh~~~G~Vsma~sg~ds~GSqFFItL~d~p~LDgk~tVFGkVv~G~eVld~I~~~~t~~gk 162 (622)
+.++.++|+..|++|++.++|+.+|+|+||+.++|+++|||||+|.++++||++|+|||+|++||+||++|+.+++..+.
T Consensus 79 G~gg~si~g~~f~dE~~~l~h~~~G~lsmA~~gp~t~gSQFfIt~~~~~~LDg~~tvFG~Vv~G~dvv~~I~~~~~~~~~ 158 (172)
T 2cmt_A 79 GTGGKSIYGRKFDDENFQLRHEGFGVLSMANSGPNTNGSQFFICTTKCDWLDGKHVVFGRVVDGQNVVKKMESVGSKSGK 158 (172)
T ss_dssp SSCCCBTTBSCBCCCCCCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHGGGGCCTTCC
T ss_pred CCCCCccCCCcccccccCcccCCceEEEEeeCCCCCcccEEEEECCCCCccCCCeeEEEEEEcCHHHHHHHHhCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcccccccCCC
Q 006988 163 KASHVSSSEDSS 174 (622)
Q Consensus 163 p~~~ikIsd~g~ 174 (622)
|..+|.|.+|+.
T Consensus 159 P~~~v~I~~~g~ 170 (172)
T 2cmt_A 159 VKEPVIISRCGE 170 (172)
T ss_dssp CSSCEEEEEEEE
T ss_pred CCCCEEEEEeEe
Confidence 999999999974
No 12
>1z81_A Cyclophilin; structural genomics, structural genomics consortium, SGC, isomerase; 2.80A {Plasmodium yoelii yoelii} SCOP: b.62.1.1
Probab=100.00 E-value=1.1e-44 Score=363.36 Aligned_cols=171 Identities=50% Similarity=0.865 Sum_probs=160.6
Q ss_pred CCCCCCCeEEEEEEeCCceeeeEEEEEcCCCChHHHHHHHHHhhcCCCCCCCCCCCccccCceeEEeecCceEEecCCCC
Q 006988 1 MSEKKNPLVFLDVSIDGDPVEKIVIELFADVVPKTAENFRALCTGEKGIGKSTGKPLHYKGTMFHRIIKGFMIQGGDFSK 80 (622)
Q Consensus 1 m~~~~np~V~fDtsigg~~~GrIvIELf~d~APktv~NFl~Lctg~~g~g~~~~k~g~YdGt~F~RVipg~vIQgGd~~~ 80 (622)
|.++.||+|||||++++.++|+|+||||+++||+||+||++||+++.|.+ ++.+||+||.|||||++|||||||+..
T Consensus 54 ~~~~~~~~V~~disi~~t~~G~I~ieL~~d~aP~tv~NF~~L~~~~~g~~---g~~~~Y~gt~FHRVi~~FmiQgGD~~~ 130 (229)
T 1z81_A 54 LTNPSNPVVFMDINLGNNFLGKFKFELFQNIVPKTSENFRQFCTGEYKVN---NLPVGYKNTIFHRVIKEFMIQGGDFIN 130 (229)
T ss_dssp SSSTTCCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTCCBSS---SSBCSSTTEECCEEETTTEEEECCTTT
T ss_pred ccCCCCcEEEEEEeECCeecccEEEEEcCCCCCHHHHHHHHHhhCCCCCc---CCCceECCCEEEEEeCCCEEEcCCCcC
Confidence 35668999999999999999999999999999999999999999876542 366799999999999999999999988
Q ss_pred CCCCCCCcccCCcccCCCCCCCCCCCeEEEeccCCCCCCCceeEEeeccCCCCCCCceEEEEEe--cChHHHHHHHhcCC
Q 006988 81 GNGTGGESIYGGKFTDENFKLDHNGPGILSMANSGANTNGSQFFITFRRQHHLDGKHVVFGKVV--KGLNIVKKIEQVGT 158 (622)
Q Consensus 81 g~g~gg~si~g~~~~dE~~~lkh~~~G~Vsma~sg~ds~GSqFFItL~d~p~LDgk~tVFGkVv--~G~eVld~I~~~~t 158 (622)
+++.++.+||+..|.+|++.++|+.+|+|+||+.++++++|||||||.++++||++|||||+|| +||+||++|+.+++
T Consensus 131 g~G~Gg~siyg~~f~dE~~~l~h~~~G~LsMAn~gpntngSQFFIt~~~~~~LDg~~tVFG~Vv~~eGmdVv~~I~~~~t 210 (229)
T 1z81_A 131 HNGSGSLSIYGEKFDDENFDIKHDKEGLLSMANSGPNTNGCQFFITTKKCEWLDGKNVVFGRIIDNDSLLLLKKIENVSV 210 (229)
T ss_dssp SSSCCCCBTTBSCCCCCCCCSCCCSTTEEEECCSSSSCCCSCEEEESSCCGGGBTTBCEEEEECSHHHHHHHHHHHHSCB
T ss_pred CCCCCCCccCCCcccccccccccCCCcEEEeccCCCCCcccEEEEECCCCcccCCCeeEEEEEEecCcHHHHHHHHhCCC
Confidence 8999999999999999999999999999999999999999999999999999999999999999 99999999999999
Q ss_pred cc--CcCCcccccccCCC
Q 006988 159 VK--KKKASHVSSSEDSS 174 (622)
Q Consensus 159 ~~--gkp~~~ikIsd~g~ 174 (622)
+. +.|..+|.|.+|+.
T Consensus 211 ~~~~~~P~~~V~I~~cG~ 228 (229)
T 1z81_A 211 TPYIYKPKIPINVVECGE 228 (229)
T ss_dssp CTTTCCBSSCEEEEEEEE
T ss_pred CCCCCCCCCCeEEEeCee
Confidence 87 78999999999974
No 13
>2haq_A Cyclophilin; rotamase, proline, isomerase, CIS-trans, protozoa, KAla-AZAR.; 1.97A {Leishmania donovani} PDB: 3eov_A* 3bt8_A
Probab=100.00 E-value=2.1e-44 Score=347.49 Aligned_cols=161 Identities=51% Similarity=0.857 Sum_probs=152.9
Q ss_pred CCCCeEEEEEEeCCceeeeEEEEEcCCCChHHHHHHHHHhhcCCCCCCCCCCCcc-ccCceeEEeecCceEEecCCCCCC
Q 006988 4 KKNPLVFLDVSIDGDPVEKIVIELFADVVPKTAENFRALCTGEKGIGKSTGKPLH-YKGTMFHRIIKGFMIQGGDFSKGN 82 (622)
Q Consensus 4 ~~np~V~fDtsigg~~~GrIvIELf~d~APktv~NFl~Lctg~~g~g~~~~k~g~-YdGt~F~RVipg~vIQgGd~~~g~ 82 (622)
..+|+||||+++++.++|+|+||||+++||+||+||++||+|.. +| |+||.||||+++||||||++..++
T Consensus 9 ~~~~~v~~di~i~~t~~G~i~ieL~~~~aP~t~~NF~~L~~g~~---------g~~Y~g~~FhRvi~~f~iQgGd~~~~~ 79 (172)
T 2haq_A 9 EVTAKVYFDVMIDSEPLGRITIGLFGKDAPLTTENFRQLCTGEH---------GFGYKDSIFHRVIQNFMIQGGDFTNFD 79 (172)
T ss_dssp CCCEEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTTT---------SCCSTTCBCCEEETTTEEEECCTTTSS
T ss_pred CCCCeEEEEEEECCEecceEEEEEeCCCCcHHHHHHHHHhccCC---------CcccCCCEEEEEECCCEEecCCccCCC
Confidence 46899999999999999999999999999999999999998754 47 999999999999999999988888
Q ss_pred CCCCCcccCCcccCCCCCCCCCCCeEEEeccCCCCCCCceeEEeeccCCCCCCCceEEEEEecChHHHHHHHhcCCccC-
Q 006988 83 GTGGESIYGGKFTDENFKLDHNGPGILSMANSGANTNGSQFFITFRRQHHLDGKHVVFGKVVKGLNIVKKIEQVGTVKK- 161 (622)
Q Consensus 83 g~gg~si~g~~~~dE~~~lkh~~~G~Vsma~sg~ds~GSqFFItL~d~p~LDgk~tVFGkVv~G~eVld~I~~~~t~~g- 161 (622)
+.++.+||+..|++|++.++|. +|+|+||+.++++++|||||||.++++||++|+|||+|++||+||++|+.++++.+
T Consensus 80 g~gg~si~g~~f~dE~~~l~h~-~G~lsmAn~gp~tngSQFfIt~~~~~~LDg~~~vFG~Vv~G~dvv~~I~~~~t~~~~ 158 (172)
T 2haq_A 80 GTGGKSIYGEKFADENLNVKHF-VGALSMANAGPNTNGSQFFITTAPTPWLDGRHVVFGKVLDGMDVVLRIEKTKTNSHD 158 (172)
T ss_dssp SSCCCCSSSSCBCCCCCCSCCC-TTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCBCGGG
T ss_pred CCCCccccCCcccCcCCCcccC-ceEEEEccCCCCCcccEEEEECCCCCccCCCEeEEEEEeCCHHHHHHHHhCCcCCCC
Confidence 9999999999999999999999 99999999999999999999999999999999999999999999999999999866
Q ss_pred cCCcccccccCCC
Q 006988 162 KKASHVSSSEDSS 174 (622)
Q Consensus 162 kp~~~ikIsd~g~ 174 (622)
.|...|.|.+|+.
T Consensus 159 ~P~~~v~I~~~g~ 171 (172)
T 2haq_A 159 RPVKPVKIVASGE 171 (172)
T ss_dssp CBSSCEEEEEEEE
T ss_pred cCCCCeEEEEeEE
Confidence 8889999999974
No 14
>3k2c_A Peptidyl-prolyl CIS-trans isomerase; ssgcid, NIH, niaid, SBRI, UW, decode, cytoplasm, rotamase, structural genomics; HET: PG5; 1.95A {Encephalitozoon cuniculi}
Probab=100.00 E-value=3.9e-44 Score=351.51 Aligned_cols=166 Identities=51% Similarity=0.875 Sum_probs=156.6
Q ss_pred CCCCCCCeEEEEEEeCCceeeeEEEEEcCCCChHHHHHHHHHhhcCCCCCCCCCCCcc-ccCceeEEeecCceEEecCCC
Q 006988 1 MSEKKNPLVFLDVSIDGDPVEKIVIELFADVVPKTAENFRALCTGEKGIGKSTGKPLH-YKGTMFHRIIKGFMIQGGDFS 79 (622)
Q Consensus 1 m~~~~np~V~fDtsigg~~~GrIvIELf~d~APktv~NFl~Lctg~~g~g~~~~k~g~-YdGt~F~RVipg~vIQgGd~~ 79 (622)
|....||+|||||++++..+|+|+||||+++||+||+||++||+++.| | |+|+.||||+++|||||||+.
T Consensus 22 ~~~~~~p~v~~di~i~~t~~G~I~ieL~~~~aP~tv~NF~~L~~g~~g---------~~Y~g~~FhRvi~~f~iQgGd~~ 92 (193)
T 3k2c_A 22 MAKEASGNVYFDVYANEESLGRIVMKLEDDIVPKTAKNFRTLCERPKG---------EGYKGSTFHRIIPGFMVQGGDYT 92 (193)
T ss_dssp CC--CTTCEEEEEEETTEEEEEEEEEECTTTSHHHHHHHHHHHHSCTT---------SSSTTCBEEEEETTTEEEECCTT
T ss_pred ccccCCCEEEEEEeECCEEeeEEEEEEcCCCChHHHHHHHHHhccccC---------CcccCCEEEEEeCCCEEEeCCCC
Confidence 566789999999999999999999999999999999999999987543 5 999999999999999999998
Q ss_pred CCCCCCCCcccCCcccCCCCCCCCCCCeEEEeccCCCCCCCceeEEeeccCCCCCCCceEEEEEecChHHHHHHHhcCCc
Q 006988 80 KGNGTGGESIYGGKFTDENFKLDHNGPGILSMANSGANTNGSQFFITFRRQHHLDGKHVVFGKVVKGLNIVKKIEQVGTV 159 (622)
Q Consensus 80 ~g~g~gg~si~g~~~~dE~~~lkh~~~G~Vsma~sg~ds~GSqFFItL~d~p~LDgk~tVFGkVv~G~eVld~I~~~~t~ 159 (622)
.+++.++.++|+..|++|++.++|+.+|+|+||+.++++++|||||+|.++++||++|+|||+||+|||||++|+.++++
T Consensus 93 ~~~g~gg~si~g~~f~dE~~~l~h~~~G~lsmAn~gp~t~gSQFFIt~~~~~~LDg~~tVFG~Vv~Gmdvv~~I~~~~t~ 172 (193)
T 3k2c_A 93 AHNGTGGRSIYGEKFPDENFELKHTKEGILSMANCGAHTNGSQFFITLGKTQWLDEKHVVFGEVVEGMDVVHKIAKYGSE 172 (193)
T ss_dssp TSSSSCCCCTTSSCBCCCCCCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTTCCT
T ss_pred CCCCcCCcccCCCcccccccccccCCCcEEEEEeCCCCCCccEEEEECCCCcccCCCccEEEEEeCCHHHHHHHHhcCCC
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCcCC--cccccccCCCC
Q 006988 160 KKKKA--SHVSSSEDSSD 175 (622)
Q Consensus 160 ~gkp~--~~ikIsd~g~~ 175 (622)
.+.|. .+|+|.+|+..
T Consensus 173 ~g~P~~~~~v~I~~cG~l 190 (193)
T 3k2c_A 173 SGQVKKGYRIEIRDCGVL 190 (193)
T ss_dssp TCCCCTTCCEEEEEEEEC
T ss_pred CCcCccCccEEEEEceEe
Confidence 99998 89999999854
No 15
>3rdd_A Peptidyl-prolyl CIS-trans isomerase A; beta barrel, cytosolic, inhibito isomerase-isomerase inhibitor complex; HET: EA4; 2.14A {Homo sapiens}
Probab=100.00 E-value=3.1e-44 Score=349.87 Aligned_cols=163 Identities=61% Similarity=1.025 Sum_probs=155.3
Q ss_pred CCCCeEEEEEEeCCceeeeEEEEEcCCCChHHHHHHHHHhhcCCCCCCCCCCCcc-ccCceeEEeecCceEEecCCCCCC
Q 006988 4 KKNPLVFLDVSIDGDPVEKIVIELFADVVPKTAENFRALCTGEKGIGKSTGKPLH-YKGTMFHRIIKGFMIQGGDFSKGN 82 (622)
Q Consensus 4 ~~np~V~fDtsigg~~~GrIvIELf~d~APktv~NFl~Lctg~~g~g~~~~k~g~-YdGt~F~RVipg~vIQgGd~~~g~ 82 (622)
..||+|||||++++.++|+|+||||+++||+||+||++||+++.| | |+|+.||||+++|||||||+..++
T Consensus 20 ~~~p~v~~di~i~~~~~G~I~ieL~~~~aP~t~~NF~~L~~~~~g---------~~Y~g~~FhRvi~~f~iQgGd~~~~~ 90 (184)
T 3rdd_A 20 MVNPTVFFDIAVDGEPLGRVSFELFADKVPKTAENFRALSTGEKG---------FGYKGSCFHRIIPGFMCQGGDFTRHN 90 (184)
T ss_dssp -CCCEEEEEEEETTEEEEEEEEEECTTTSHHHHHHHHHHHHTTTS---------CSSTTCBCCEEETTTEEEECCTTTSS
T ss_pred CCCCEEEEEEeECCEeeeEEEEEEeCCCCcHHHHHHHHHhccCcC---------cccCCCEEEEccCCcEEEeCCCCCCC
Confidence 368999999999999999999999999999999999999987643 5 999999999999999999998899
Q ss_pred CCCCCcccCCcccCCCCCCCCCCCeEEEeccCCCCCCCceeEEeeccCCCCCCCceEEEEEecChHHHHHHHhcCCccCc
Q 006988 83 GTGGESIYGGKFTDENFKLDHNGPGILSMANSGANTNGSQFFITFRRQHHLDGKHVVFGKVVKGLNIVKKIEQVGTVKKK 162 (622)
Q Consensus 83 g~gg~si~g~~~~dE~~~lkh~~~G~Vsma~sg~ds~GSqFFItL~d~p~LDgk~tVFGkVv~G~eVld~I~~~~t~~gk 162 (622)
+.++.++|+..|.+|++.++|+.+|+|+||+.++++++|||||+|.++++||++|+|||+||+|||||++|+.++++.+.
T Consensus 91 g~gg~si~g~~~~de~~~l~h~~~G~lsmA~~gp~s~gSQFfIt~~~~~~LDg~~tVFG~Vv~G~dvv~~I~~~~~~~g~ 170 (184)
T 3rdd_A 91 GTGGKSIYGEKFEDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKVKEGMNIVEAMERFGSRNGK 170 (184)
T ss_dssp SSCCCBTTBSCBCCCCCCSCCCSTTEEEECCSSTTCBSSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTTCCTTSC
T ss_pred CCCCcccCCCcccCcccccccCCCcEEEEEeCCCCCcccEEEEEeCCchhhCCCceEEEEEecCHHHHHHHHhcCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcccccccCCCC
Q 006988 163 KASHVSSSEDSSD 175 (622)
Q Consensus 163 p~~~ikIsd~g~~ 175 (622)
|..+|.|.+|+..
T Consensus 171 P~~~v~I~~cG~l 183 (184)
T 3rdd_A 171 TSKKITIADCGQL 183 (184)
T ss_dssp CSSCEEEEEEEEC
T ss_pred CcCCeEEEeCeEE
Confidence 9999999999853
No 16
>3ich_A Peptidyl-prolyl CIS-trans isomerase B; beta sandwich, cyclosporin, endoplasmic reticulum, glycoprot isomerase, rotamase; 1.20A {Homo sapiens} PDB: 3ici_A* 1cyn_A* 2esl_A* 2rmc_A* 1h0p_A 1xo7_A 1xq7_A*
Probab=100.00 E-value=1.1e-43 Score=347.00 Aligned_cols=161 Identities=53% Similarity=0.895 Sum_probs=152.5
Q ss_pred CCeEEEEEEeCCceeeeEEEEEcCCCChHHHHHHHHHhhcCCCCCCCCCCCcc-ccCceeEEeecCceEEecCCCCCCCC
Q 006988 6 NPLVFLDVSIDGDPVEKIVIELFADVVPKTAENFRALCTGEKGIGKSTGKPLH-YKGTMFHRIIKGFMIQGGDFSKGNGT 84 (622)
Q Consensus 6 np~V~fDtsigg~~~GrIvIELf~d~APktv~NFl~Lctg~~g~g~~~~k~g~-YdGt~F~RVipg~vIQgGd~~~g~g~ 84 (622)
+++|||||++++..+|+|+||||+++||+||+||++||+|+. +| |+||.||||+++||||||++..+++.
T Consensus 15 ~~~v~~di~i~~t~~G~i~ieL~~~~aP~t~~NF~~L~~g~~---------g~~Y~g~~FhRvi~~f~iQgGd~~~~~g~ 85 (188)
T 3ich_A 15 TVKVYFDLRIGDEDVGRVIFGLFGKTVPKTVDNFVALATGEK---------GFGYKNSKFHRVIKDFMIQGGDFTRGDGT 85 (188)
T ss_dssp EEEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTTT---------SCSSTTCBCCEEETTTEEEECCTTTSSSS
T ss_pred CCeEEEEEEECCEeceeEEEEEcCCCCcHHHHHHHHHhcccC---------CccccCCEEEEEECCCEEEcCCccCCCCC
Confidence 678999999999999999999999999999999999998753 47 99999999999999999998888999
Q ss_pred CCCcccCCcccCCCCCCCCCCCeEEEeccCCCCCCCceeEEeeccCCCCCCCceEEEEEecChHHHHHHHhcCCccC-cC
Q 006988 85 GGESIYGGKFTDENFKLDHNGPGILSMANSGANTNGSQFFITFRRQHHLDGKHVVFGKVVKGLNIVKKIEQVGTVKK-KK 163 (622)
Q Consensus 85 gg~si~g~~~~dE~~~lkh~~~G~Vsma~sg~ds~GSqFFItL~d~p~LDgk~tVFGkVv~G~eVld~I~~~~t~~g-kp 163 (622)
++.+||+..|.+|++.++|+.+|+|+||+.++|+++|||||||.++++||++|+|||+||+||+||++|+.++++.+ .|
T Consensus 86 gg~si~g~~f~dE~~~l~h~~~G~lsmAn~gp~tngSQFfIt~~~~~~LDg~~tVFG~Vv~G~dvv~~I~~~~~~~~~~P 165 (188)
T 3ich_A 86 GGKSIYGERFPDENFKLKHYGPGWVSMANAGKDTNGSQFFITTVKTAWLDGKHVVFGKVLEGMEVVRKVESTKTDSRDKP 165 (188)
T ss_dssp CCCBTTBSCBCCCCCCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCBCTTSCB
T ss_pred CCccccCCcccccccCcccCCCeEEEEccCCCCCcccEEEEECCCCcccCCCeeEEEEEeCCHHHHHHHHhCCcCCCCeE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999865 88
Q ss_pred CcccccccCCCC
Q 006988 164 ASHVSSSEDSSD 175 (622)
Q Consensus 164 ~~~ikIsd~g~~ 175 (622)
...|.|.+|+..
T Consensus 166 ~~~v~I~~~~~l 177 (188)
T 3ich_A 166 LKDVIIADCGKI 177 (188)
T ss_dssp SSCEEEEEEEEE
T ss_pred CCCEEEEEeEEE
Confidence 889999999744
No 17
>4fru_A Cyclophilin B, peptidyl-prolyl CIS-trans isomerase; cyclophilin-type ppiase, peptidyl-prolyl CIS-trans isomerase chaperone, foldase; HET: ME2 PEG; 1.10A {Equus caballus} PDB: 4frv_A* 3ich_A 3ici_A* 1cyn_A* 2esl_A* 2rmc_A* 1h0p_A 1xo7_A 1xq7_A*
Probab=100.00 E-value=2.5e-43 Score=343.75 Aligned_cols=163 Identities=53% Similarity=0.909 Sum_probs=153.9
Q ss_pred CCCeEEEEEEeCCceeeeEEEEEcCCCChHHHHHHHHHhhcCCCCCCCCCCCccccCceeEEeecCceEEecCCCCCCCC
Q 006988 5 KNPLVFLDVSIDGDPVEKIVIELFADVVPKTAENFRALCTGEKGIGKSTGKPLHYKGTMFHRIIKGFMIQGGDFSKGNGT 84 (622)
Q Consensus 5 ~np~V~fDtsigg~~~GrIvIELf~d~APktv~NFl~Lctg~~g~g~~~~k~g~YdGt~F~RVipg~vIQgGd~~~g~g~ 84 (622)
-+++|||||++++.++|+|+||||+++||+||+||++||++++| .||+|+.||||+++||||||++..+++.
T Consensus 11 ~~~~v~~di~i~~~~~G~i~ieL~~~~aP~t~~NF~~L~~~~~g--------~~Y~g~~FhRvi~~f~iQgGd~~~~~g~ 82 (185)
T 4fru_A 11 VTVKVYFDLRIGDEDIGRVVIGLFGKTVPKTVDNFVALATGEKG--------FGYKDSKFHRVIKDFMIQGGDFTRGDGT 82 (185)
T ss_dssp EEEEEEEEEEETTEEEEEEEEEECTTTSHHHHHHHHHHHHTTTS--------CCSTTCBCCEEETTTEEEECCTTTSSSS
T ss_pred cCcEEEEEEEECCEecceEEEEEeCCCCcHHHHHHHHHHhcCCC--------CeEcCCEEEEeeCCCeEEECCCCCCCCC
Confidence 47899999999999999999999999999999999999987532 2699999999999999999999889999
Q ss_pred CCCcccCCcccCCCCCCCCCCCeEEEeccCCCCCCCceeEEeeccCCCCCCCceEEEEEecChHHHHHHHhcCCcc-CcC
Q 006988 85 GGESIYGGKFTDENFKLDHNGPGILSMANSGANTNGSQFFITFRRQHHLDGKHVVFGKVVKGLNIVKKIEQVGTVK-KKK 163 (622)
Q Consensus 85 gg~si~g~~~~dE~~~lkh~~~G~Vsma~sg~ds~GSqFFItL~d~p~LDgk~tVFGkVv~G~eVld~I~~~~t~~-gkp 163 (622)
++.++|+..|++|++.++|+.+|+|+||+.++++++|||||+|.++++||++|+|||+|++||+||++|+.++++. +.|
T Consensus 83 gg~si~g~~f~de~~~~~h~~~G~lsma~~gp~t~~SQFfI~~~~~~~Ld~~~~vFG~Vv~G~dvv~~I~~~~t~~~~~P 162 (185)
T 4fru_A 83 GGKSIYGERFPDENFKLKHYGPGWVSMANAGKDTNGSQFFITTVKTAWLDGKHVVFGKVLEGMEVVRKVETTKTDGRDKP 162 (185)
T ss_dssp CCCBTTBSCBCCCCCCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCBCTTSCB
T ss_pred CCccccCCccCccccccCcCCCeEEEEeeCCCCCcceEEEEEeCCCcccCCCccEEEEEeCCHHHHHHHHhCCCCCCCcC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999975 789
Q ss_pred CcccccccCCCC
Q 006988 164 ASHVSSSEDSSD 175 (622)
Q Consensus 164 ~~~ikIsd~g~~ 175 (622)
...|.|.+|+..
T Consensus 163 ~~~v~I~~~g~l 174 (185)
T 4fru_A 163 LKDVTIADCGKI 174 (185)
T ss_dssp SSCEEEEEEEEE
T ss_pred CCCEEEEEceEE
Confidence 999999999854
No 18
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=100.00 E-value=5.2e-43 Score=370.96 Aligned_cols=170 Identities=65% Similarity=1.034 Sum_probs=161.7
Q ss_pred CCeEEEEEEeCCceeeeEEEEEcCCCChHHHHHHHHHhhcCCCCCCCCCCCccccCceeEEeecCceEEecCCCCCCCCC
Q 006988 6 NPLVFLDVSIDGDPVEKIVIELFADVVPKTAENFRALCTGEKGIGKSTGKPLHYKGTMFHRIIKGFMIQGGDFSKGNGTG 85 (622)
Q Consensus 6 np~V~fDtsigg~~~GrIvIELf~d~APktv~NFl~Lctg~~g~g~~~~k~g~YdGt~F~RVipg~vIQgGd~~~g~g~g 85 (622)
||+|||||+|++.++|+|+||||+++||+||+||+.||+++.|.+...++++||+||.|||||+||||||||++.++|++
T Consensus 15 ~~~v~~~~~~~~~~~G~i~~~l~~~~~P~t~~nf~~l~~~~~~~~~~~g~~~~y~~~~fhrv~~~f~~q~Gd~~~~~g~g 94 (370)
T 1ihg_A 15 NPRVFFDVDIGGERVGRIVLELFADIVPKTAENFRALCTGEKGIGPTTGKPLHFKGCPFHRIIKKFMIQGGDFSNQNGTG 94 (370)
T ss_dssp SCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHCTTCBCTTTSSBSCCTTCBEEEEETTTEEEECCTTTSSSSC
T ss_pred CCeEEEEEEECCEecccEEEEEcCCCCchHHHHHHHHcCCCcCcCccCCCcceeCCcEeEEEECCcEEECCCCCCCCCCC
Confidence 89999999999999999999999999999999999999998887655567779999999999999999999999899999
Q ss_pred CCcccCCcccCCCCCCCCCCCeEEEeccCCCCCCCceeEEeeccCCCCCCCceEEEEEecChHHHHHHHhcCCccCcCCc
Q 006988 86 GESIYGGKFTDENFKLDHNGPGILSMANSGANTNGSQFFITFRRQHHLDGKHVVFGKVVKGLNIVKKIEQVGTVKKKKAS 165 (622)
Q Consensus 86 g~si~g~~~~dE~~~lkh~~~G~Vsma~sg~ds~GSqFFItL~d~p~LDgk~tVFGkVv~G~eVld~I~~~~t~~gkp~~ 165 (622)
+.+|||..|.+|++.++|+.+|+|+||+.|+|++||||||||.++++||++|||||+||+||+||++|+.+++..+.|..
T Consensus 95 ~~~~~~~~~~~e~~~~~~~~~g~l~ma~~~~~~~~sqffi~~~~~~~ld~~~~vfG~v~~g~~v~~~i~~~~~~~~~P~~ 174 (370)
T 1ihg_A 95 GESIYGEKFEDENFHYKHDKEGLLSMANAGSNTNGSQFFITTVPTPHLDGKHVVFGQVIKGMGVAKILENVEVKGEKPAK 174 (370)
T ss_dssp CCBTTBSCBCCCCCCBCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCEETTEESS
T ss_pred CCCCCCCCcCCCcCCcCCCCCeEEEEeeCCCCCCCceEEEeCCCCcccCCCceEEEEEecCHHHHHHHHcCCCCCCccce
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999998888999
Q ss_pred ccccccCCCC
Q 006988 166 HVSSSEDSSD 175 (622)
Q Consensus 166 ~ikIsd~g~~ 175 (622)
.|.|.+|+..
T Consensus 175 ~v~I~~~g~l 184 (370)
T 1ihg_A 175 LCVIAECGEL 184 (370)
T ss_dssp CEEEEEEEEE
T ss_pred eEEEEEEEEe
Confidence 9999999744
No 19
>2c3b_A Ppiase, cyclophilin; isomerase, 3D domain swapping, misfolding, Asp F 11, allergen, rotamase; 1.85A {Aspergillus fumigatus} SCOP: b.62.1.1
Probab=100.00 E-value=6.5e-43 Score=337.20 Aligned_cols=158 Identities=53% Similarity=0.859 Sum_probs=120.5
Q ss_pred eEEEEEEeC--Ccee---eeEEEEEcCCCChHHHHHHHHHhhcCCCCCCCCCCCcc-ccCceeEEeecCceEEecCCCCC
Q 006988 8 LVFLDVSID--GDPV---EKIVIELFADVVPKTAENFRALCTGEKGIGKSTGKPLH-YKGTMFHRIIKGFMIQGGDFSKG 81 (622)
Q Consensus 8 ~V~fDtsig--g~~~---GrIvIELf~d~APktv~NFl~Lctg~~g~g~~~~k~g~-YdGt~F~RVipg~vIQgGd~~~g 81 (622)
+|||||+++ |.+. |+|+||||+++||+||+||++||+|.. +| |+|+.||||+++||||||++..+
T Consensus 4 ~vf~di~i~~~~~~~T~~G~i~ieL~~~~aP~t~~NF~~L~~g~~---------g~~Y~g~~fhRvi~~f~iQgGd~~~~ 74 (172)
T 2c3b_A 4 QVFFDVEYAPVGTAETKVGRIVFNLFDKDVPKTAKNFRELCKRPA---------GEGYRESTFHRIIPNFMIQGGDFTRG 74 (172)
T ss_dssp CEEEEEEECCTTCSCCEEEEEEEEECTTTSHHHHHHHHHHHHSCT---------TTSSTTCBCCEEETTTEEEECC----
T ss_pred EEEEEEEeCCCCceecccccEEEEEcCCCCcHHHHHHHHHhccCC---------CcccCCCEEEEEeCCCEEEeCCcCCC
Confidence 799999999 8777 999999999999999999999998754 35 99999999999999999998788
Q ss_pred CCCCCCcccCCcccCCCCCCCCCCCeEEEeccCCCCCCCceeEEeeccCCCCCCCceEEEEEec--ChHHHHHHHhcCCc
Q 006988 82 NGTGGESIYGGKFTDENFKLDHNGPGILSMANSGANTNGSQFFITFRRQHHLDGKHVVFGKVVK--GLNIVKKIEQVGTV 159 (622)
Q Consensus 82 ~g~gg~si~g~~~~dE~~~lkh~~~G~Vsma~sg~ds~GSqFFItL~d~p~LDgk~tVFGkVv~--G~eVld~I~~~~t~ 159 (622)
++.++.+||+..|++|++.++|+.+|+|+||+.++|+++|||||||.++++||++|+|||+|++ ||+||++|+.++++
T Consensus 75 ~g~gg~si~g~~f~dE~~~~~h~~~G~lsmA~~gp~t~gSQFfIt~~~~~~LDg~~tvFG~Vv~~~G~dvv~~I~~~~t~ 154 (172)
T 2c3b_A 75 NGTGGRSIYGDKFADENFSRKHDKKGILSMANAGPNTNGSQFFITTAVTSWLDGKHVVFGEVADEKSYSVVKEIEALGSS 154 (172)
T ss_dssp ------------------CHHHHHTCEEEEC---------CEEEECSCCTTCCSCCEEEEEECSHHHHHHHHHHHTTCCT
T ss_pred CCCCCcccCCCcccCcccccccCCCeEEEEeeCCCCCcccEEEEECCCCCccCCCeeEEEEEEecCCHHHHHHHHhCCCC
Confidence 8999999999999999999999999999999999999999999999999999999999999999 99999999999998
Q ss_pred cC--cCCcccccccCCC
Q 006988 160 KK--KKASHVSSSEDSS 174 (622)
Q Consensus 160 ~g--kp~~~ikIsd~g~ 174 (622)
.+ .|..+|.|.+|+.
T Consensus 155 ~~~~~P~~~v~I~~cG~ 171 (172)
T 2c3b_A 155 SGSVRSNTRPKIVNCGE 171 (172)
T ss_dssp TSCCCSSSCCEEEEEEE
T ss_pred CCCccCCCCeEEEeCee
Confidence 87 8899999999974
No 20
>2ose_A Probable peptidyl-prolyl CIS-trans isomerase; cyclophilin; 2.04A {Mimivirus}
Probab=100.00 E-value=7.7e-42 Score=344.14 Aligned_cols=171 Identities=30% Similarity=0.515 Sum_probs=147.0
Q ss_pred CCCCCeEEEEEEeCCceeeeEEEEEcCCCChHHHHHHHHHhhcCCCCCC--CCCCC----c--c-ccCceeEEeecCceE
Q 006988 3 EKKNPLVFLDVSIDGDPVEKIVIELFADVVPKTAENFRALCTGEKGIGK--STGKP----L--H-YKGTMFHRIIKGFMI 73 (622)
Q Consensus 3 ~~~np~V~fDtsigg~~~GrIvIELf~d~APktv~NFl~Lctg~~g~g~--~~~k~----g--~-YdGt~F~RVipg~vI 73 (622)
...||+|||||+|++..+|+|+||||.++||+||+||++||++....-. .+++. + | |+||.|||||++|||
T Consensus 11 ~~~~p~v~~di~i~~t~~G~I~ieL~~d~aP~tv~NF~~L~~g~~~~~~p~~~~~~~~~~G~~~~Y~gt~FHRVi~~Fmi 90 (234)
T 2ose_A 11 SGKNPRVYMDIVLNNEIIGRLQIKLFRDAFPAGVENFVQLTNGKTYRVNSNGTGKYKYNRHINRTYEGCKFHNVLHNNYI 90 (234)
T ss_dssp CCSSCEEEEEEEETTEEEEEEEEEECGGGCHHHHHHHHHHHHTCCCC---------------CCCSTTCBCCEEETTTEE
T ss_pred CCCCCEEEEEEEECCcccceEEEEEcCCCCcHHHHHHHHHhcCCccccccccccccccccCCceEECCcEEEEEECCCEE
Confidence 3479999999999999999999999999999999999999997621100 00011 3 6 999999999999999
Q ss_pred EecCCCCCCCCCCCcccCCc-----ccCCCCCCCCCCCeEEEecc----CCCCCCCceeEEeecc------CCCCCCCce
Q 006988 74 QGGDFSKGNGTGGESIYGGK-----FTDENFKLDHNGPGILSMAN----SGANTNGSQFFITFRR------QHHLDGKHV 138 (622)
Q Consensus 74 QgGd~~~g~g~gg~si~g~~-----~~dE~~~lkh~~~G~Vsma~----sg~ds~GSqFFItL~d------~p~LDgk~t 138 (622)
||||+..+++.++.+|||.. |. ++.|+|+.+|+|+||+ .++++++|||||||.+ +++||++||
T Consensus 91 QgGd~~~g~G~Gg~siyg~~~~p~~f~--~~~l~h~~~G~lsMAn~~~~~gpntngSQFFIt~~~~~~~~g~p~LDg~~t 168 (234)
T 2ose_A 91 VSGDIYNSNGSSAGTVYCDEPIPPVFG--DYFYPHESKGLLSLVPYTDESGNRYYDSTFMITLDDIRPSNVLDELDRDQV 168 (234)
T ss_dssp EECCCC----CCCCCTTTTCCBCCCCC--SCCCCSCSTTEEEECCEECTTSCEEBCSCEEEESSCCCTTSSGGGSCTTSE
T ss_pred EcCCccCCCCCCCccccCCccCccccc--CcCccCCCCCEEEEecccccCCCCCccceEEEEecCccccCCCcccCCCee
Confidence 99998888999999999987 65 5689999999999999 8999999999999999 999999999
Q ss_pred EEEEEecChHHHHHHHhcCCcc-CcCCcccccccCCCC
Q 006988 139 VFGKVVKGLNIVKKIEQVGTVK-KKKASHVSSSEDSSD 175 (622)
Q Consensus 139 VFGkVv~G~eVld~I~~~~t~~-gkp~~~ikIsd~g~~ 175 (622)
|||+||+|||||++|+.++++. +.|...|.|.+|+..
T Consensus 169 VFG~Vv~GmdVv~~I~~~~t~~~~~P~~~V~I~~~~~l 206 (234)
T 2ose_A 169 VIGQVYGGLDVLDKINSMIKPYAGRKYPTFSIGKCGAY 206 (234)
T ss_dssp EEEEEEECHHHHHHHHHHTCCCTTCCCCCEEEEEEEEC
T ss_pred EEEEEeCCHHHHHHHHhCCcCCCCCccCCEEEEEEEEe
Confidence 9999999999999999999977 789999999999744
No 21
>2x7k_A Peptidyl-prolyl CIS-trans isomerase-like 1; isomerase-immunosuppressant complex, immunosuppressant; HET: MLE MVA BMT ABA SAR; 1.15A {Homo sapiens} PDB: 1xwn_A
Probab=100.00 E-value=1.3e-40 Score=319.37 Aligned_cols=154 Identities=46% Similarity=0.772 Sum_probs=142.1
Q ss_pred CCCCCeEEEEEEeCCceeeeEEEEEcCCCChHHHHHHHHHhhcCCCCCCCCCCCccccCceeEEeecCceEEecCCCCCC
Q 006988 3 EKKNPLVFLDVSIDGDPVEKIVIELFADVVPKTAENFRALCTGEKGIGKSTGKPLHYKGTMFHRIIKGFMIQGGDFSKGN 82 (622)
Q Consensus 3 ~~~np~V~fDtsigg~~~GrIvIELf~d~APktv~NFl~Lctg~~g~g~~~~k~g~YdGt~F~RVipg~vIQgGd~~~g~ 82 (622)
...++.|+|+|++| +|+||||+++||+||+||++||+ .+||+||.||||+++||||||++. ++
T Consensus 8 ~~~~~~v~l~t~~G-----~i~ieL~~~~aP~t~~NF~~L~~-----------~g~Y~g~~fhRvi~~f~iQgGd~~-~~ 70 (166)
T 2x7k_A 8 SWQPPNVYLETSMG-----IIVLELYWKHAPKTCKNFAELAR-----------RGYYNGTKFHRIIKDFMIQGGDPT-GT 70 (166)
T ss_dssp TCCCSEEEEEETTE-----EEEEEECTTTCHHHHHHHHHHHH-----------HTTTTTEECCEEETTTEEEECCTT-SS
T ss_pred ccCCCEEEEEeCCC-----cEEEEEccCCCCHHHHHHHHHHh-----------cCCCCCCEEEEEECCCEEEcCCCC-CC
Confidence 34689999999865 99999999999999999999994 458999999999999999999985 77
Q ss_pred CCCCCcccCCcccCCC-CCCCCCCCeEEEeccCCCCCCCceeEEeeccCCCCCCCceEEEEEecChHHHHHHHhcCCcc-
Q 006988 83 GTGGESIYGGKFTDEN-FKLDHNGPGILSMANSGANTNGSQFFITFRRQHHLDGKHVVFGKVVKGLNIVKKIEQVGTVK- 160 (622)
Q Consensus 83 g~gg~si~g~~~~dE~-~~lkh~~~G~Vsma~sg~ds~GSqFFItL~d~p~LDgk~tVFGkVv~G~eVld~I~~~~t~~- 160 (622)
+.++.++|+..|++|+ +.++|..+|+|+||+.++|+++|||||+|.++++||++|+|||+|++||+||++|+.++++.
T Consensus 71 g~gg~si~g~~~~dE~~~~l~h~~~G~lsmAn~gp~s~gSQFfI~~~~~~~Ldg~~tvFG~Vv~G~dvv~~I~~~~t~~~ 150 (166)
T 2x7k_A 71 GRGGASIYGKQFEDELHPDLKFTGAGILAMANAGPDTNGSQFFVTLAPTQWLDGKHTIFGRVCQGIGMVNRVGMVETNSQ 150 (166)
T ss_dssp SSCCCCTTSSCBCCCCCTTSCCCSTTEEEECBSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHTTSCBCTT
T ss_pred CCCCCccCCCccccccccccCCCCCeEEEEeeCCCCCccceEEEECCCCCccCCCeeEEEEEEcCHHHHHHHHcCCcCCC
Confidence 8889999999999997 58999999999999999999999999999999999999999999999999999999999876
Q ss_pred CcCCcccccccCC
Q 006988 161 KKKASHVSSSEDS 173 (622)
Q Consensus 161 gkp~~~ikIsd~g 173 (622)
+.|..+|.|.+|.
T Consensus 151 ~~P~~~i~I~~~~ 163 (166)
T 2x7k_A 151 DRPVDDVKIIKAY 163 (166)
T ss_dssp SCBSSCCEEEEEE
T ss_pred CCcCCCeEEEEEE
Confidence 5888888887764
No 22
>2fu0_A Cyclophilin, putative; PFE0505W, cyclosporin-binding domain, structura genomics, structural genomics consortium, SGC, unknown FUNC; 1.80A {Plasmodium falciparum} SCOP: b.62.1.1
Probab=100.00 E-value=5.5e-40 Score=313.36 Aligned_cols=152 Identities=44% Similarity=0.637 Sum_probs=139.3
Q ss_pred CCCeEEEEEEeCCceeeeEEEEEcCCCChHHHHHHHHHhhcCCCCCCCCCCCccccCceeEEeecCceEEecCCCCCCCC
Q 006988 5 KNPLVFLDVSIDGDPVEKIVIELFADVVPKTAENFRALCTGEKGIGKSTGKPLHYKGTMFHRIIKGFMIQGGDFSKGNGT 84 (622)
Q Consensus 5 ~np~V~fDtsigg~~~GrIvIELf~d~APktv~NFl~Lctg~~g~g~~~~k~g~YdGt~F~RVipg~vIQgGd~~~g~g~ 84 (622)
-.+.|.|+|++| +|+||||+++||+||+||++||. .+||+|+.||||+++||||||++ .+++.
T Consensus 4 ~~~~v~~~T~~G-----~i~ieL~~~~aP~t~~NF~~L~~-----------~g~Y~g~~fhRvi~~f~iQgGd~-~~~g~ 66 (160)
T 2fu0_A 4 TPKSAIIYTTMG-----DIHISLFYKECKKTVQNFSVHSI-----------NGYYNNCIFHRVIKHFMVQTGDP-SGDGT 66 (160)
T ss_dssp -CCEEEEEETTE-----EEEEEECTTTCHHHHHHHHHHHH-----------TTTTTTCBCCEEETTTEEEECCT-TSSSS
T ss_pred CCCEEEEEecCc-----cEEEEEeCCCChHHHHHHHHHhc-----------cCccCCCEEEEEECCCEEEeCCc-CCCCC
Confidence 367899999766 99999999999999999999994 45999999999999999999998 46788
Q ss_pred CCCcccCCcccCCCC-CCCCCCCeEEEeccCCCCCCCceeEEeeccCCCCCCCceEEEEEecChHHHHHHHhcCCc-cCc
Q 006988 85 GGESIYGGKFTDENF-KLDHNGPGILSMANSGANTNGSQFFITFRRQHHLDGKHVVFGKVVKGLNIVKKIEQVGTV-KKK 162 (622)
Q Consensus 85 gg~si~g~~~~dE~~-~lkh~~~G~Vsma~sg~ds~GSqFFItL~d~p~LDgk~tVFGkVv~G~eVld~I~~~~t~-~gk 162 (622)
++.+||+..|++|++ .++|+.+|+|+||+.++++++|||||+|.++++||++|+|||+|++||+||++|+.++++ .+.
T Consensus 67 gg~si~g~~~~dE~~~~l~h~~~G~lsmA~~gp~s~~SQFfI~~~~~~~Ldg~~tvFG~Vv~G~dvv~~I~~~~t~~~~~ 146 (160)
T 2fu0_A 67 GGESIWGNEFEDEFFDHLNHSKPFMVSMANCGPNTNGSQFFITTVPCPWLDFKHTVFGKVTQGSKIVLDIEKVRTDKRDK 146 (160)
T ss_dssp CCCCTTSSCBCCCCBTTBCSSSSSEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCBCTTSC
T ss_pred CCCcccCCCccccccCCcccCCceEEEEecCCCCCcccEEEEECCCCCccCCCcEEEEEEEcCHHHHHHHHhCCcCCCCC
Confidence 899999999999987 699999999999999999999999999999999999999999999999999999999997 478
Q ss_pred CCcccccccCC
Q 006988 163 KASHVSSSEDS 173 (622)
Q Consensus 163 p~~~ikIsd~g 173 (622)
|..+|.|.++.
T Consensus 147 P~~~v~I~~~~ 157 (160)
T 2fu0_A 147 PLEDIKILNIK 157 (160)
T ss_dssp BSSCCBEEEEE
T ss_pred cCCCeEEEEEE
Confidence 88888887653
No 23
>2a2n_A Peptidylprolyl isomerase domain and WD repeat CON; CIS-trans isomerization, protein-folding, peptidylprolyl ISO structural genomics; 1.65A {Homo sapiens} SCOP: b.62.1.1
Probab=100.00 E-value=6.7e-40 Score=317.21 Aligned_cols=151 Identities=48% Similarity=0.711 Sum_probs=137.8
Q ss_pred CCCeEEEEEEeCCceeeeEEEEEcCCCChHHHHHHHHHhhcCCCCCCCCCCCccccCceeEEeecCceEEecCCCCCCCC
Q 006988 5 KNPLVFLDVSIDGDPVEKIVIELFADVVPKTAENFRALCTGEKGIGKSTGKPLHYKGTMFHRIIKGFMIQGGDFSKGNGT 84 (622)
Q Consensus 5 ~np~V~fDtsigg~~~GrIvIELf~d~APktv~NFl~Lctg~~g~g~~~~k~g~YdGt~F~RVipg~vIQgGd~~~g~g~ 84 (622)
....|.|+|++| +|+||||+++||+||+||++||+ .+||+||.||||+++||||||++. +++.
T Consensus 20 ~~~~v~~~t~~G-----~i~ieL~~~~aP~t~~NF~~L~~-----------~g~Y~g~~FhRvi~~f~iQgGd~~-~~g~ 82 (176)
T 2a2n_A 20 VSDSAIIHTSMG-----DIHTKLFPVECPKTVENFCVHSR-----------NGYYNGHTFHRIIKGFMIQTGDPT-GTGM 82 (176)
T ss_dssp CCSEEEEEETTE-----EEEEEECTTTCHHHHHHHHHHHH-----------TTTTTTCBCCEEETTTEEEECCTT-SSSS
T ss_pred CCCEEEEEecCc-----cEEEEEeCCCChHHHHHHHHHhh-----------cCccCCCEEEEEECCcEEEccCCC-CCCC
Confidence 455677777655 99999999999999999999994 458999999999999999999984 6788
Q ss_pred CCCcccCCcccCCCC-CCCCCCCeEEEeccCCCCCCCceeEEeeccCCCCCCCceEEEEEecChHHHHHHHhcCCc--cC
Q 006988 85 GGESIYGGKFTDENF-KLDHNGPGILSMANSGANTNGSQFFITFRRQHHLDGKHVVFGKVVKGLNIVKKIEQVGTV--KK 161 (622)
Q Consensus 85 gg~si~g~~~~dE~~-~lkh~~~G~Vsma~sg~ds~GSqFFItL~d~p~LDgk~tVFGkVv~G~eVld~I~~~~t~--~g 161 (622)
++.++|+..|.+|++ .|+|+.+|+|+||+.++|+++|||||+|.++++||++|+|||+|++||+||++|+.++++ .+
T Consensus 83 gg~si~g~~~~dE~~~~l~h~~~G~lsmA~~gp~s~gSQFFIt~~~~~~LDg~~tVFG~Vv~Gmdvv~~I~~~~t~~~~~ 162 (176)
T 2a2n_A 83 GGESIWGGEFEDEFHSTLRHDRPYTLSMANAGSNTNGSQFFITVVPTPWLDNKHTVFGRVTKGMEVVQRISNVKVNPKTD 162 (176)
T ss_dssp CCCCTTSSCBCCCCCTTCCSCSSSEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCBCTTTC
T ss_pred CCCcccCCccccccccccccCCceEEEEEeCCCCCcccEEEEECCCCCccCCCeeEEEEEeCCHHHHHHHHcCCccCCCC
Confidence 899999999999987 699999999999999999999999999999999999999999999999999999999997 67
Q ss_pred cCCcccccccC
Q 006988 162 KKASHVSSSED 172 (622)
Q Consensus 162 kp~~~ikIsd~ 172 (622)
.|...|.|.++
T Consensus 163 ~P~~~v~I~~v 173 (176)
T 2a2n_A 163 KPYEDVSIINI 173 (176)
T ss_dssp CBSSCCBEEEE
T ss_pred ccCCCeEEEEE
Confidence 88888888665
No 24
>1zkc_A Peptidyl-prolyl CIS-trans isomerase like 2; CIS-trans isomerization, peptidylprolyl isomerase, protein- folding, structural genomics consortium; 1.65A {Homo sapiens} SCOP: b.62.1.1
Probab=100.00 E-value=6.3e-40 Score=322.34 Aligned_cols=154 Identities=45% Similarity=0.760 Sum_probs=142.2
Q ss_pred CCCCeEEEEEEeCCceeeeEEEEEcCCCChHHHHHHHHHhhcCCCCCCCCCCCccccCceeEEeecCceEEecCCCCCCC
Q 006988 4 KKNPLVFLDVSIDGDPVEKIVIELFADVVPKTAENFRALCTGEKGIGKSTGKPLHYKGTMFHRIIKGFMIQGGDFSKGNG 83 (622)
Q Consensus 4 ~~np~V~fDtsigg~~~GrIvIELf~d~APktv~NFl~Lctg~~g~g~~~~k~g~YdGt~F~RVipg~vIQgGd~~~g~g 83 (622)
+.+.+|.|+|++| +|+||||+++||+||+||++||+ .+||+||.||||+++|||||||+. +++
T Consensus 17 ~~~~~v~l~T~~G-----~I~ieL~~~~aP~tv~NF~~L~~-----------~g~Ydg~~FhRVi~~f~iQgGd~~-~~g 79 (197)
T 1zkc_A 17 RGSGYVRLHTNKG-----DLNLELHCDLTPKTCENFIRLCK-----------KHYYDGTIFHRSIRNFVIQGGDPT-GTG 79 (197)
T ss_dssp CSCEEEEEEETTE-----EEEEEECTTTSHHHHHHHHHHHH-----------TTTTTTEEEEEEETTTEEEECCTT-SSS
T ss_pred CCCcEEEEEeCCc-----cEEEEEcCCCCcHHHHHHHHHHh-----------cCCCCCCEEEEEeCCCEEEcCCCC-CCC
Confidence 4567788888766 99999999999999999999994 459999999999999999999985 778
Q ss_pred CCCCcccCCcccCC-CCCCCCCCCeEEEeccCCCCCCCceeEEeeccCCCCCCCceEEEEEecChHHHHHHHhcCCcc--
Q 006988 84 TGGESIYGGKFTDE-NFKLDHNGPGILSMANSGANTNGSQFFITFRRQHHLDGKHVVFGKVVKGLNIVKKIEQVGTVK-- 160 (622)
Q Consensus 84 ~gg~si~g~~~~dE-~~~lkh~~~G~Vsma~sg~ds~GSqFFItL~d~p~LDgk~tVFGkVv~G~eVld~I~~~~t~~-- 160 (622)
.++.++||..|.+| ++.++|+.+|+|+||+.++++++|||||||.++++||++|||||+||+||+||++|+.++++.
T Consensus 80 ~Gg~si~g~~f~dE~~~~l~h~~~G~lsMAn~gp~sngSQFFIt~~~~~~LDg~~tVFG~Vv~Gmdvv~~I~~~~t~~~~ 159 (197)
T 1zkc_A 80 TGGESYWGKPFKDEFRPNLSHTGRGILSMANSGPNSNRSQFFITFRSCAYLDKKHTIFGRVVGGFDVLTAMENVESDPKT 159 (197)
T ss_dssp SCCCBTTBSCBCCCCCTTCCSCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHHSCBCTTT
T ss_pred CCCCccCCCccccccCcCcCCCCceEEEEecCCCCCcccEEEEEcCCCCccCCCccEEEEEEcCHHHHHHHHcCCCCCCC
Confidence 88999999999999 588999999999999999999999999999999999999999999999999999999999976
Q ss_pred CcCCcccccccCCC
Q 006988 161 KKKASHVSSSEDSS 174 (622)
Q Consensus 161 gkp~~~ikIsd~g~ 174 (622)
+.|...|.|.+|+.
T Consensus 160 ~~P~~~i~I~~~~v 173 (197)
T 1zkc_A 160 DRPKEEIRIDATTV 173 (197)
T ss_dssp CCBSSCCEEEEEEE
T ss_pred CCcCCCeEEEEEEE
Confidence 78888999988863
No 25
>1w74_A Peptidyl-prolyl CIS-trans isomerase A; cyclophilin, ppiase, RV0009, rotamase, structural proteomics in europe, spine; 2.6A {Mycobacterium tuberculosis} SCOP: b.62.1.1
Probab=100.00 E-value=8.8e-40 Score=320.04 Aligned_cols=161 Identities=39% Similarity=0.642 Sum_probs=142.4
Q ss_pred CCCCeEEEEEEeCCceeeeEEEEEcCCCChHHHHHHHHHhhcCCCCCC-CCC---CCccccCceeEEeecCceEEecCCC
Q 006988 4 KKNPLVFLDVSIDGDPVEKIVIELFADVVPKTAENFRALCTGEKGIGK-STG---KPLHYKGTMFHRIIKGFMIQGGDFS 79 (622)
Q Consensus 4 ~~np~V~fDtsigg~~~GrIvIELf~d~APktv~NFl~Lctg~~g~g~-~~~---k~g~YdGt~F~RVipg~vIQgGd~~ 79 (622)
..++.|.|++++| +|+||||+++||+||+||++||+|+++... .++ +.+||+||.|||||++|||||||+
T Consensus 21 ~~~~~v~l~t~~G-----~I~ieL~~~~aP~tv~NF~~L~tG~~~~~~~~~g~~~~~~~Y~g~~FhRVi~~fmiQgGd~- 94 (191)
T 1w74_A 21 LATATATLHTNRG-----DIKIALFGNHAPKTVANFVGLAQGTKDYSTQNASGGPSGPFYDGAVFHRVIQGFMIQGGDP- 94 (191)
T ss_dssp CCSEEEEEEETTE-----EEEEEECTTTSHHHHHHHHHHHHTCSCCSSCCTTBSSSSCSSTTEEEEEEETTTEEEECCT-
T ss_pred CCCeEEEEEecce-----eEEEEEcCCCChHHHHHHHHHhcCCcccccccccccccCCccCCCEEEEEeCCCEEecCCC-
Confidence 3578899988766 999999999999999999999999877531 111 358999999999999999999997
Q ss_pred CCCCCCCCcccCCcccCC-CCCCCCCCCeEEEeccCCCCCCCceeEEeeccCCCCCCCceEEEEEec--ChHHHHHHHhc
Q 006988 80 KGNGTGGESIYGGKFTDE-NFKLDHNGPGILSMANSGANTNGSQFFITFRRQHHLDGKHVVFGKVVK--GLNIVKKIEQV 156 (622)
Q Consensus 80 ~g~g~gg~si~g~~~~dE-~~~lkh~~~G~Vsma~sg~ds~GSqFFItL~d~p~LDgk~tVFGkVv~--G~eVld~I~~~ 156 (622)
.+++.++ ++..|++| ++.|+|+.+|+|+||+.++|+++|||||||.++++||++|||||+||+ ||+||++|+.+
T Consensus 95 ~g~G~gg---~g~~f~dE~~~~l~h~~~G~lsMAn~gpntngSQFFIt~~~~~~LDg~~tVFG~Vv~~~Gmdvv~~I~~~ 171 (191)
T 1w74_A 95 TGTGRGG---PGYKFADEFHPELQFDKPYLLAMANAGPGTNGSQFFITVGKTPHLNRRHTIFGEVIDAESQRVVEAISKT 171 (191)
T ss_dssp TSSSSCC---SSCCBCCCCCTTCCSCSSSEEEECCSSTTCBSSCEEEESSCCGGGTTTSCEEEEECSHHHHHHHHHHHTS
T ss_pred CCCCCCC---CCCccccccccCCCcCCCcEEEEeeCCCCCccceEEEEcCCCcccCCCeeEEEEEEECCCHHHHHHHHcC
Confidence 4566666 57889999 578999999999999999999999999999999999999999999999 99999999999
Q ss_pred CCcc-CcCCcccccccCC
Q 006988 157 GTVK-KKKASHVSSSEDS 173 (622)
Q Consensus 157 ~t~~-gkp~~~ikIsd~g 173 (622)
+++. +.|...|.|.+|+
T Consensus 172 ~t~~~~~P~~~v~I~~~~ 189 (191)
T 1w74_A 172 ATDGNDRPTDPVVIESIT 189 (191)
T ss_dssp CBCTTSCBSSCCEEEEEE
T ss_pred CcCCCCCcCCCeEEEEEE
Confidence 9964 7888999998875
No 26
>2k7n_A Peptidyl-prolyl CIS-trans isomerase-like 1; beta barrel, disorder-order transition, HOOK-like, mRNA processing, mRNA splicing, rotamase; NMR {Homo sapiens}
Probab=100.00 E-value=7.2e-40 Score=323.17 Aligned_cols=155 Identities=46% Similarity=0.767 Sum_probs=143.0
Q ss_pred CCCCCeEEEEEEeCCceeeeEEEEEcCCCChHHHHHHHHHhhcCCCCCCCCCCCccccCceeEEeecCceEEecCCCCCC
Q 006988 3 EKKNPLVFLDVSIDGDPVEKIVIELFADVVPKTAENFRALCTGEKGIGKSTGKPLHYKGTMFHRIIKGFMIQGGDFSKGN 82 (622)
Q Consensus 3 ~~~np~V~fDtsigg~~~GrIvIELf~d~APktv~NFl~Lctg~~g~g~~~~k~g~YdGt~F~RVipg~vIQgGd~~~g~ 82 (622)
...++.|+|+|++| +|+||||+++||+||+||++||+ .+||+||.||||+++||||||++. ++
T Consensus 8 ~~~~~~V~l~T~~G-----~I~ieL~~d~aP~tv~NF~~L~~-----------~g~Ydg~~FhRVi~~F~iQgGd~~-~~ 70 (203)
T 2k7n_A 8 SWQPPNVYLETSMG-----IIVLELYWKHAPKTCKNFAELAR-----------RGYYNGTKFHRIIKDFMIQGGDPT-GT 70 (203)
T ss_dssp SCCCSEEEEEESSC-----EEEEEECTTTCTTHHHHHHHHHH-----------HTCGGGCEEEEEETTTEEEEECSS-SS
T ss_pred ccCCCEEEEEeCCC-----cEEEEEccCCCcHHHHHHHHHHh-----------cCccCCCEEEEEeCCcEEEcCCCC-CC
Confidence 34689999999876 99999999999999999999994 459999999999999999999985 67
Q ss_pred CCCCCcccCCcccCCC-CCCCCCCCeEEEeccCCCCCCCceeEEeeccCCCCCCCceEEEEEecChHHHHHHHhcCCcc-
Q 006988 83 GTGGESIYGGKFTDEN-FKLDHNGPGILSMANSGANTNGSQFFITFRRQHHLDGKHVVFGKVVKGLNIVKKIEQVGTVK- 160 (622)
Q Consensus 83 g~gg~si~g~~~~dE~-~~lkh~~~G~Vsma~sg~ds~GSqFFItL~d~p~LDgk~tVFGkVv~G~eVld~I~~~~t~~- 160 (622)
+.++.+||+..|++|+ +.|+|..+|+|+||+.++|++++||||+|.++++||++|+|||+||+||+||++|+.++++.
T Consensus 71 g~gg~si~g~~f~dE~~~~l~h~~~G~lsMAn~gpnsngSQFFIt~~~~~~LDg~~tVFG~VveGmdvv~kI~~~~t~~~ 150 (203)
T 2k7n_A 71 GRGGASIYGKQFEDELHPDLKFTGAGILAMANAGPDTNGSQFFVTLAPTQWLDGKHTIFGRVCQGIGMVNRVGMVETNSQ 150 (203)
T ss_dssp SSCCCTTSCSCBCCCCCCSSCCCSSCEEEEEESSTTCEEEEEEEESSCCCSSTTTSCEEEEEESCHHHHHHHHSCCEEET
T ss_pred CCCCCccCCCcccccccccccCCCCeEEEEeeCCCCCcccEEEEEcCCCCccCCCeeEEEEEEcCHHHHHHHHcCCcCCC
Confidence 7889999999999997 58999999999999999999999999999999999999999999999999999999999876
Q ss_pred CcCCcccccccCCC
Q 006988 161 KKKASHVSSSEDSS 174 (622)
Q Consensus 161 gkp~~~ikIsd~g~ 174 (622)
+.|...|+|.+|..
T Consensus 151 ~~P~~~V~I~~~~v 164 (203)
T 2k7n_A 151 DRPVDDVKIIKAYP 164 (203)
T ss_dssp TEECCCCBEEEEEE
T ss_pred CCcCCCeEEEEEEE
Confidence 58888898888863
No 27
>2poe_A Cyclophilin-like protein, putative; cryptosporidium parvum cyclophilin isomerase, structural genomics; 2.01A {Cryptosporidium parvum iowa II} PDB: 2qer_A
Probab=100.00 E-value=9.7e-40 Score=318.39 Aligned_cols=154 Identities=42% Similarity=0.642 Sum_probs=139.9
Q ss_pred CCCCeEEEEEEeCCceeeeEEEEEcCCCChHHHHHHHHHhhcCCCCCCCCCCCccccCceeEEeecCceEEecCCCCCCC
Q 006988 4 KKNPLVFLDVSIDGDPVEKIVIELFADVVPKTAENFRALCTGEKGIGKSTGKPLHYKGTMFHRIIKGFMIQGGDFSKGNG 83 (622)
Q Consensus 4 ~~np~V~fDtsigg~~~GrIvIELf~d~APktv~NFl~Lctg~~g~g~~~~k~g~YdGt~F~RVipg~vIQgGd~~~g~g 83 (622)
...+.|.|+|++ |+|+||||+++||+||+||++||+ .+||+|+.||||+++||||||++. +++
T Consensus 14 ~~~~~v~i~t~~-----G~i~ieL~~~~aP~t~~NF~~L~~-----------~g~Y~g~~FhRvi~~f~iQgGd~~-~~g 76 (185)
T 2poe_A 14 LYFQGVRIITNY-----GDLKFELFCSQCPKACKNFLALSA-----------SGYYKNTIFHKNIKGFIIQGGDPT-GTG 76 (185)
T ss_dssp -CCCEEEEEETT-----EEEEEEECTTTCHHHHHHHHHHHH-----------TTTTTTEEEEEECTTSEEEEEETT-SSS
T ss_pred CCceEEEEEecC-----ccEEEEEeCCCCcHHHHHHHHHhc-----------cCCCCCCEEEEEECCCEEEcCCCC-CCC
Confidence 346677777654 499999999999999999999994 458999999999999999999986 778
Q ss_pred CCCCcccCCcccCCC-CCCCCCCCeEEEeccCC----CCCCCceeEEeeccCCCCCCCceEEEEEecChHHHHHHHhcCC
Q 006988 84 TGGESIYGGKFTDEN-FKLDHNGPGILSMANSG----ANTNGSQFFITFRRQHHLDGKHVVFGKVVKGLNIVKKIEQVGT 158 (622)
Q Consensus 84 ~gg~si~g~~~~dE~-~~lkh~~~G~Vsma~sg----~ds~GSqFFItL~d~p~LDgk~tVFGkVv~G~eVld~I~~~~t 158 (622)
.++.++||..|++|+ +.|+|+.+|+|+||+.+ +++++|||||||+++++||++|||||+|++||+||++|+.+++
T Consensus 77 ~gg~si~g~~~~dE~~~~l~h~~~G~lsmA~~g~~~~p~s~gSQFFIt~~~~~~LDg~~tVFG~Vv~Gmdvv~~I~~~~t 156 (185)
T 2poe_A 77 KGGESIYGRYFDDEIYPELKYDRRGILSMASKGASKKPNTNGSQFFITYSSLPQLNGEYVIFGKLIDGFETLNTLENCPS 156 (185)
T ss_dssp SCCCBTTBSCBCCCCCTTSCCCSTTEEEECCSCC-CCCSCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHHSCB
T ss_pred CCCCccCCCcccccccCCCccCCCeEEEEecCCCCCCCCCccceEEEECCCCCccCCCeeEEEEEeCCHHHHHHHHhCCc
Confidence 889999999999997 78999999999999999 9999999999999999999999999999999999999999998
Q ss_pred cc-CcCCcccccccCCC
Q 006988 159 VK-KKKASHVSSSEDSS 174 (622)
Q Consensus 159 ~~-gkp~~~ikIsd~g~ 174 (622)
+. +.|...|.|.+|..
T Consensus 157 ~~~~~P~~~v~I~~~~i 173 (185)
T 2poe_A 157 DKSHKPIDEIIIKDIVI 173 (185)
T ss_dssp CTTSCBSSCCEEEEEEE
T ss_pred CCCCCcCCCeEEEEEEE
Confidence 75 68888898888763
No 28
>2b71_A Cyclophilin-like protein; structural genomics, structural genomics consortium, SGC, isomerase; 2.50A {Plasmodium yoelii} SCOP: b.62.1.1
Probab=100.00 E-value=1.1e-39 Score=320.58 Aligned_cols=152 Identities=43% Similarity=0.710 Sum_probs=141.1
Q ss_pred CCCeEEEEEEeCCceeeeEEEEEcCCCChHHHHHHHHHhhcCCCCCCCCCCCccccCceeEEeecCceEEecCCCCCCCC
Q 006988 5 KNPLVFLDVSIDGDPVEKIVIELFADVVPKTAENFRALCTGEKGIGKSTGKPLHYKGTMFHRIIKGFMIQGGDFSKGNGT 84 (622)
Q Consensus 5 ~np~V~fDtsigg~~~GrIvIELf~d~APktv~NFl~Lctg~~g~g~~~~k~g~YdGt~F~RVipg~vIQgGd~~~g~g~ 84 (622)
.++.|+|+|++| +|+||||+++||+||+||++||+ .+||+||.||||+++||||||++. +++.
T Consensus 37 ~~~~V~l~T~~G-----~I~ieL~~~~aP~tv~NF~~L~~-----------~g~Y~g~~FhRVi~~f~iQgGd~~-~~g~ 99 (196)
T 2b71_A 37 ERGYITIYTNLG-----DFEVELYWYHSPKTCLNFYTLCE-----------MGFYDNTIFHRVIPNFVIQGGDPT-GTGK 99 (196)
T ss_dssp HSCEEEEEETTE-----EEEEEECTTTSHHHHHHHHHHHH-----------TTTTTTEEEEEEETTTEEEEEETT-SSSS
T ss_pred CCcEEEEEeCCC-----CEEEEEeCCCCcHHHHHHHHHhh-----------cCCcCCCEEEEEeCCcEEEcCCCC-CCCC
Confidence 478899999765 99999999999999999999994 458999999999999999999985 7788
Q ss_pred CCCcccCCcccCC-CCCCCCCCCeEEEeccCCCCCCCceeEEeeccCCCCCCCceEEEEEecChHHHHHHHhcCCcc-Cc
Q 006988 85 GGESIYGGKFTDE-NFKLDHNGPGILSMANSGANTNGSQFFITFRRQHHLDGKHVVFGKVVKGLNIVKKIEQVGTVK-KK 162 (622)
Q Consensus 85 gg~si~g~~~~dE-~~~lkh~~~G~Vsma~sg~ds~GSqFFItL~d~p~LDgk~tVFGkVv~G~eVld~I~~~~t~~-gk 162 (622)
++.+|||..|++| ++.++|+.+|+|+||+.++++++|||||||.++++||++|+|||+||+||+||++|+.++++. +.
T Consensus 100 gg~si~g~~~~dE~~~~l~h~~~G~lsMAn~gpns~gSQFFIt~~~~~~LDg~~tVFG~Vv~Gmdvv~~I~~~~t~~~~~ 179 (196)
T 2b71_A 100 GGKSIYGEYFEDEINKELKHTGAGILSMSNNGPNTNSSQFFITLAPLPHLDGKHTIFARVSKNMTCIENIASVQTTATNK 179 (196)
T ss_dssp CCCBTTBSCBCCCCCTTCCCCSTTEEEECCSSTTCBSSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCBCTTCC
T ss_pred CCCccCCCcccccccCCcCcCCCeEEEEccCCCCCcccEEEEECCCCCccCCCEeEEEEEecCHHHHHHHHhCCcCCCCC
Confidence 8999999999999 468999999999999999999999999999999999999999999999999999999999865 68
Q ss_pred CCcccccccCC
Q 006988 163 KASHVSSSEDS 173 (622)
Q Consensus 163 p~~~ikIsd~g 173 (622)
|...|.|.+|.
T Consensus 180 P~~~i~I~~~~ 190 (196)
T 2b71_A 180 PIFDLKILRTS 190 (196)
T ss_dssp BSSCCEEEEEE
T ss_pred CCCCeEEEEEE
Confidence 88889888875
No 29
>3bo7_A Peptidyl-prolyl CIS-trans isomerase cyclophilin-T; isomerase-immunosuppressant complex, immunosuppressant, cyclophilin, structural G structural genomics consortium, SGC; HET: BMT; 2.35A {Toxoplasma gondii}
Probab=100.00 E-value=6.9e-40 Score=323.29 Aligned_cols=153 Identities=39% Similarity=0.626 Sum_probs=134.9
Q ss_pred CCCCeEEEEEEeCCceeeeEEEEEcCCCChHHHHHHHHHhhcCCCCCCCCCCCccccCceeEEeecCceEEec-----CC
Q 006988 4 KKNPLVFLDVSIDGDPVEKIVIELFADVVPKTAENFRALCTGEKGIGKSTGKPLHYKGTMFHRIIKGFMIQGG-----DF 78 (622)
Q Consensus 4 ~~np~V~fDtsigg~~~GrIvIELf~d~APktv~NFl~Lctg~~g~g~~~~k~g~YdGt~F~RVipg~vIQgG-----d~ 78 (622)
+++.+|.|+|++| +|+||||+++||+||+||++||+ .+||+||.||||+++|||||| |+
T Consensus 4 ~~~~~v~l~T~~G-----~i~ieL~~~~aP~t~~NF~~L~~-----------~g~Ydg~~FhRvi~~f~iQgG~~~~~Dp 67 (201)
T 3bo7_A 4 KKKGYLRIVTTQG-----SLNIELHADMAPRACDSFLRLCA-----------VKYFDDTIFHRCIRNFMIQGGRAELRQP 67 (201)
T ss_dssp -CCEEEEEEETTE-----EEEEEECTTTCHHHHHHHHHHHH-----------TTTTTTCBEEEEETTTEEEECCGGGCCC
T ss_pred CCceEEEEEeCCC-----CEEEEEcCCCCcHHHHHHHHHHh-----------cCccCCCEEEEeeCCCEEEcCcccccCC
Confidence 4577899998766 99999999999999999999994 459999999999999999999 87
Q ss_pred CCCCCCCCCccc-------CCcccCC-CCCCCCCCCeEEEeccCCCCCCCceeEEeeccCCCCCCCceEEEEEecChHHH
Q 006988 79 SKGNGTGGESIY-------GGKFTDE-NFKLDHNGPGILSMANSGANTNGSQFFITFRRQHHLDGKHVVFGKVVKGLNIV 150 (622)
Q Consensus 79 ~~g~g~gg~si~-------g~~~~dE-~~~lkh~~~G~Vsma~sg~ds~GSqFFItL~d~p~LDgk~tVFGkVv~G~eVl 150 (622)
. +++.++.++| +..|.+| ++.++|+.+|+|+||+.++|+++|||||||.++++||++|||||+||+||+||
T Consensus 68 ~-~~g~gg~si~~~~~~~~g~~f~dE~~~~l~h~~~G~lsmA~~gp~s~gSQFFIt~~~~~~LDg~~tVFG~Vv~Gmdvv 146 (201)
T 3bo7_A 68 S-KKKEVQQSPRSISGFPGGAPFEDEFDNRLVHQGIGVLSMANDGKHSNLSEFFITFKSCEHLNNKHTIFGRVVGGLDVL 146 (201)
T ss_dssp --------CCSSCCCSSTTCCCBCCCCCTTCCCCSTTEEEECCSSTTCBSSCEEEESSCCGGGTTTSCEEEEEEECHHHH
T ss_pred C-CCCCCCccccccccccCCCcccCcccCCCCcCCCcEEEEeeCCCCCcccEEEEECCCCcccCCCceEEEEEecCHHHH
Confidence 5 6788889999 8899999 57899999999999999999999999999999999999999999999999999
Q ss_pred HHHHhcCCcc-CcCCcccccccCC
Q 006988 151 KKIEQVGTVK-KKKASHVSSSEDS 173 (622)
Q Consensus 151 d~I~~~~t~~-gkp~~~ikIsd~g 173 (622)
++|+.++++. +.|...|.|.+|+
T Consensus 147 ~~I~~~~t~~~~~P~~~i~I~~~~ 170 (201)
T 3bo7_A 147 RQWEKLETDKKDKPLKPPKVEEII 170 (201)
T ss_dssp HHHTTCCBCTTSCBSSCCBEEEEE
T ss_pred HHHHhCCcCCCCCcCCCeEEEEEE
Confidence 9999999975 6888888888775
No 30
>2ok3_A Peptidyl-prolyl CIS-trans isomerase-like 3; beta-barrel, helix, disulfide bridge; 2.00A {Homo sapiens} SCOP: b.62.1.1 PDB: 1xyh_A 2oju_A*
Probab=100.00 E-value=1.7e-39 Score=310.20 Aligned_cols=149 Identities=48% Similarity=0.781 Sum_probs=136.7
Q ss_pred eEEEEEEeCCceeeeEEEEEcCCCChHHHHHHHHHhhcCCCCCCCCCCCccccCceeEEeecCceEEecCCCCCCCCCCC
Q 006988 8 LVFLDVSIDGDPVEKIVIELFADVVPKTAENFRALCTGEKGIGKSTGKPLHYKGTMFHRIIKGFMIQGGDFSKGNGTGGE 87 (622)
Q Consensus 8 ~V~fDtsigg~~~GrIvIELf~d~APktv~NFl~Lctg~~g~g~~~~k~g~YdGt~F~RVipg~vIQgGd~~~g~g~gg~ 87 (622)
.|.|+|++| +|+||||+++||+||+||++||++ +||+||.||||+++||||||++. +++.++.
T Consensus 2 ~v~~~T~~G-----~i~ieL~~~~aP~t~~NF~~L~~~-----------g~Y~g~~fhRvi~~f~iQgGd~~-~~g~gg~ 64 (161)
T 2ok3_A 2 SVTLHTDVG-----DIKIEVFCERTPKTCENFLALCAS-----------NYYNGCIFHRNIKGFMVQTGDPT-GTGRGGN 64 (161)
T ss_dssp EEEEEETTE-----EEEEEECTTTCHHHHHHHHHHHHT-----------TTTTTCBCCEEETTTEEEECCTT-SSSSCCC
T ss_pred EEEEEeCCc-----cEEEEEcCCCCcHHHHHHHHHhhh-----------cccCCCEEEEEECCCEEecCCCC-CCCCCCC
Confidence 467777655 999999999999999999999953 58999999999999999999986 6788899
Q ss_pred cccCCcccCCCC-CCCCCCCeEEEeccCCCCCCCceeEEeeccCCCCCCCceEEEEEecChHHHHHHHhcCCcc--CcCC
Q 006988 88 SIYGGKFTDENF-KLDHNGPGILSMANSGANTNGSQFFITFRRQHHLDGKHVVFGKVVKGLNIVKKIEQVGTVK--KKKA 164 (622)
Q Consensus 88 si~g~~~~dE~~-~lkh~~~G~Vsma~sg~ds~GSqFFItL~d~p~LDgk~tVFGkVv~G~eVld~I~~~~t~~--gkp~ 164 (622)
++|+..|++|+. .++|+.+|+|+||+.++++++|||||+|.++++||++|+|||+|++||+||++|+.++++. +.|.
T Consensus 65 si~g~~~~dE~~~~l~h~~~G~lsma~~gp~s~~SQFfI~~~~~~~Ldg~~tvFG~Vv~G~dvv~~I~~~~~~~~~~~P~ 144 (161)
T 2ok3_A 65 SIWGKKFEDEYSEYLKHNVRGVVSMANNGPNTNGSQFFITYGKQPHLDMKYTVFGKVIDGLETLDELEKLPVNEKTYRPL 144 (161)
T ss_dssp CTTSSCBCCCCCTTCCSCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTCCBCTTTCCBS
T ss_pred cccCCccccccCcCcCcCCCeEEEEecCCCCCcceEEEEEcCCCCccCCCEeEEEEEeCCHHHHHHHHhCCccCCCCCcC
Confidence 999999999974 7899999999999999999999999999999999999999999999999999999999976 6888
Q ss_pred cccccccCC
Q 006988 165 SHVSSSEDS 173 (622)
Q Consensus 165 ~~ikIsd~g 173 (622)
..|.|.+|.
T Consensus 145 ~~v~I~~~~ 153 (161)
T 2ok3_A 145 NDVHIKDIT 153 (161)
T ss_dssp SCCBEEEEE
T ss_pred CCeEEEEEE
Confidence 888887765
No 31
>1v9t_A Cyclophilin B; beta barrel, isomerase-isomerase inhibitor complex; HET: NIT; 1.70A {Escherichia coli} SCOP: b.62.1.1 PDB: 1j2a_A* 1vai_A* 1clh_A
Probab=100.00 E-value=1.6e-38 Score=304.89 Aligned_cols=151 Identities=34% Similarity=0.479 Sum_probs=132.7
Q ss_pred CCCCeEEEEEEeCCceeeeEEEEEcCCCChHHHHHHHHHhhcCCCCCCCCCCCccccCceeEEeecCceEEecCCCCCCC
Q 006988 4 KKNPLVFLDVSIDGDPVEKIVIELFADVVPKTAENFRALCTGEKGIGKSTGKPLHYKGTMFHRIIKGFMIQGGDFSKGNG 83 (622)
Q Consensus 4 ~~np~V~fDtsigg~~~GrIvIELf~d~APktv~NFl~Lctg~~g~g~~~~k~g~YdGt~F~RVipg~vIQgGd~~~g~g 83 (622)
+.||.|+|+|++| +|+||||+++||+||+||++||. .+||+||.||||+++||||||++....+
T Consensus 2 ~~~~~v~~~t~~G-----~i~ieL~~~~aP~t~~NF~~L~~-----------~g~Y~g~~FhRvi~~f~iQgGd~~~~~~ 65 (166)
T 1v9t_A 2 KGDPHVLLTTSAG-----NIELELDKQKAPVSVQNFVDYVN-----------SGFYNNTTFHRVIPGFMIQGGGFTEQMQ 65 (166)
T ss_dssp CCSCEEEEEETTE-----EEEEEECTTTCHHHHHHHHHHHH-----------TTTTTTCBEEEEETTTEEEESSBCTTCC
T ss_pred CCCeEEEEEeCCc-----cEEEEEcCCCCcHHHHHHHHHhc-----------cCCCCCCEEEEEECCcEEEcCCcCcCCC
Confidence 5789999999765 99999999999999999999994 4699999999999999999999865432
Q ss_pred CCCCcccCCcccCCCCCCCCCCCeEEEeccC-CCCCCCceeEEeeccCCCCCCC-----ceEEEEEecChHHHHHHHhcC
Q 006988 84 TGGESIYGGKFTDENFKLDHNGPGILSMANS-GANTNGSQFFITFRRQHHLDGK-----HVVFGKVVKGLNIVKKIEQVG 157 (622)
Q Consensus 84 ~gg~si~g~~~~dE~~~lkh~~~G~Vsma~s-g~ds~GSqFFItL~d~p~LDgk-----~tVFGkVv~G~eVld~I~~~~ 157 (622)
...++..|.+|+....|+.+|+|+||+. ++|+++|||||||.++++||++ |||||+|++||+||++|+.++
T Consensus 66 ---~~~~g~~~~dE~~~~l~~~~G~lsmA~~~~p~t~gSQFfI~~~~~~~Ld~~~~~~~~tvFG~Vv~G~dvv~~I~~~~ 142 (166)
T 1v9t_A 66 ---QKKPNPPIKNEADNGLRNTRGTIAMARTADKDSATSQFFINVADNAFLDHGQRDFGYAVFGKVVKGMDVADKISQVP 142 (166)
T ss_dssp ---BCCCCCCBCCCGGGSCCCCTTEEEECCCSSTTCBCSCEEEESSCCGGGSCCSSCCCCCEEEEEEECHHHHHHHHTSC
T ss_pred ---CCCCCCcccccccccccCCceEEEEeecCCCCCccceEEEEeCCccccCCccCcCCeeEEEEEecCHHHHHHHHhCC
Confidence 2345778999976656667999999996 6999999999999999999998 999999999999999999999
Q ss_pred Ccc-----CcCCcccccccCC
Q 006988 158 TVK-----KKKASHVSSSEDS 173 (622)
Q Consensus 158 t~~-----gkp~~~ikIsd~g 173 (622)
++. +.|...|.|.+|.
T Consensus 143 ~~~~~~~~~~P~~~v~I~~~~ 163 (166)
T 1v9t_A 143 THDVGPYQNVPSKPVVILSAT 163 (166)
T ss_dssp EEEETTEEEEESSCCBEEEEE
T ss_pred CCCCCccCCCcCCCeEEEEEE
Confidence 875 5678888887764
No 32
>2hq6_A Serologically defined colon cancer antigen 10; protein folding, peptidyl-prolyl CIS-trans isomerase, struct genomics; 1.75A {Homo sapiens}
Probab=100.00 E-value=2.4e-38 Score=308.55 Aligned_cols=154 Identities=39% Similarity=0.696 Sum_probs=138.7
Q ss_pred CCCCCeEEEEEEeCCceeeeEEEEEcCCCChHHHHHHHHHhhcCCCCCCCCCCCccccCceeEEeecCceEEecCCCCCC
Q 006988 3 EKKNPLVFLDVSIDGDPVEKIVIELFADVVPKTAENFRALCTGEKGIGKSTGKPLHYKGTMFHRIIKGFMIQGGDFSKGN 82 (622)
Q Consensus 3 ~~~np~V~fDtsigg~~~GrIvIELf~d~APktv~NFl~Lctg~~g~g~~~~k~g~YdGt~F~RVipg~vIQgGd~~~g~ 82 (622)
.+.++.|+|+|++| +|+||||+++||+||+||++||+ .+||+||.||||+++||||||++. ++
T Consensus 21 ~~~~~~V~l~T~~G-----~I~ieL~~~~aP~tv~NF~~L~~-----------~g~Y~g~~FhRvi~~f~iQgGd~~-~~ 83 (185)
T 2hq6_A 21 PPTNGKVLLKTTAG-----DIDIELWSKEAPKACRNFIQLCL-----------EAYYDNTIFHRVVPGFIVQGGDPT-GT 83 (185)
T ss_dssp CCCBCEEEEEETTE-----EEEEEEBTTTCHHHHHHHHHHHH-----------TTTTTTEECCEEETTTEEEECCTT-SS
T ss_pred CCCCCEEEEEeCCc-----cEEEEEeCCCCcHHHHHHHHHhh-----------cCccCCCEEEEEECCCEEEcCCCC-CC
Confidence 35688999999755 99999999999999999999995 458999999999999999999985 77
Q ss_pred CCCCCcccCCcccCCCC-CCCCCCCeEEEeccCCCCCCCceeEEeeccCCCCCCCceEEEEEecChHHH--HHHHhcCCc
Q 006988 83 GTGGESIYGGKFTDENF-KLDHNGPGILSMANSGANTNGSQFFITFRRQHHLDGKHVVFGKVVKGLNIV--KKIEQVGTV 159 (622)
Q Consensus 83 g~gg~si~g~~~~dE~~-~lkh~~~G~Vsma~sg~ds~GSqFFItL~d~p~LDgk~tVFGkVv~G~eVl--d~I~~~~t~ 159 (622)
+.++.++|+..|.+|+. .++|+.+|+|+||+.+++++++||||+|.++++||++|||||+|+ ||+|+ ++|+.++++
T Consensus 84 g~gg~si~g~~~~dE~~~~l~h~~~G~lsMA~~g~~s~gSQFFIt~~~~~~LDg~~tVFG~V~-G~~v~~~~~i~~~~~~ 162 (185)
T 2hq6_A 84 GSGGESIYGAPFKDEFHSRLRFNRRGLVAMANAGSHDNGSQFFFTLGRADELNNKHTIFGKVT-GDTVYNMLRLSEVDID 162 (185)
T ss_dssp SSCCCCTTSSCBCCCCBTTBCSCSSSEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEC-GGGHHHHHHTTCSCBC
T ss_pred CCCCCcccCCccccccccCcccCCCeEEEEccCCCCCccceEEEECCCCCccCCCceEEEEEE-eCeeehhhHHhhCCcC
Confidence 88899999999999975 689999999999999999999999999999999999999999999 88875 577788774
Q ss_pred -cCcCCcccccccCCC
Q 006988 160 -KKKKASHVSSSEDSS 174 (622)
Q Consensus 160 -~gkp~~~ikIsd~g~ 174 (622)
.+.|...|+|.+|+.
T Consensus 163 ~~~~P~~~v~I~~~~v 178 (185)
T 2hq6_A 163 DDERPHNPHKIKSCEV 178 (185)
T ss_dssp TTSCBSSCCEEEEEEE
T ss_pred CCCCCCCCeEEEEEEE
Confidence 568888899988863
No 33
>3bkp_A Cyclophilin; malaria, isomerase, structural GENO structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=100.00 E-value=8.7e-38 Score=314.23 Aligned_cols=153 Identities=33% Similarity=0.555 Sum_probs=136.5
Q ss_pred CCCCCeEEEEEEeCCceeeeEEEEEcCCCChHHHHHHHHHhhcCCCCCCCCCCCccccCceeEEeecCceEEecCCCCCC
Q 006988 3 EKKNPLVFLDVSIDGDPVEKIVIELFADVVPKTAENFRALCTGEKGIGKSTGKPLHYKGTMFHRIIKGFMIQGGDFSKGN 82 (622)
Q Consensus 3 ~~~np~V~fDtsigg~~~GrIvIELf~d~APktv~NFl~Lctg~~g~g~~~~k~g~YdGt~F~RVipg~vIQgGd~~~g~ 82 (622)
.+.++.|+|+|++| +|+||||+++||+||+||++||+ .+||+||.|||||++||||||++. ++
T Consensus 18 p~~~~~V~l~T~~G-----~I~ieL~~d~aP~tv~NF~~L~~-----------~g~Ydgt~FhRVi~~FmiQgGdp~-~~ 80 (232)
T 3bkp_A 18 GSTRGKVVLHTSLG-----DLDVELWARECPLACRNFVQLCL-----------EGYYVNTIFHRVVKDFIVQGGDPT-GT 80 (232)
T ss_dssp CSCBCEEEEEETTE-----EEEEEEBTTTCHHHHHHHHHHHH-----------HTTTTTCBEEEEETTTEEEECCTT-SS
T ss_pred CCCCCEEEEEECCC-----cEEEEEcCCCCcHHHHHHHHHhh-----------cCccCCCEEEEEeCCCEEEcCCCC-CC
Confidence 34678999999865 99999999999999999999995 358999999999999999999986 77
Q ss_pred CCCCCccc--CCcccCCCC-CCCCCCCeEEEeccCCC--------------CCCCceeEEeeccCCCCCCCceEEEEEec
Q 006988 83 GTGGESIY--GGKFTDENF-KLDHNGPGILSMANSGA--------------NTNGSQFFITFRRQHHLDGKHVVFGKVVK 145 (622)
Q Consensus 83 g~gg~si~--g~~~~dE~~-~lkh~~~G~Vsma~sg~--------------ds~GSqFFItL~d~p~LDgk~tVFGkVv~ 145 (622)
+.++.+|| |..|++|+. .|+|+.+|+|+||+.++ ++++|||||||.++++||++|||||+|+
T Consensus 81 G~Gg~si~~~g~~f~dE~~~~l~h~~~G~lsMA~~g~~~~~~~n~e~g~~~~sngSQFFIt~~~~p~LDg~~tVFG~Vv- 159 (232)
T 3bkp_A 81 GRGGADTTFDGKPFDVETHPRLKFRYRGLVGVANLGRSSKDAENDERGRSLGTNGNQFFITLARADVLNNAYTLFGKVT- 159 (232)
T ss_dssp SSCCCCCTTTTCCBCCCCCTTCCCCSTTEEEECCCC----------------CBCSCEEEESSCCGGGTTTSCEEEEEC-
T ss_pred CCCCCccccCCCccCCccccCcCcCCCeEEEEeccCCcccccccccccccCCCcCCEEEEECCCCcccCCCccEEEEEE-
Confidence 88899999 899999975 78999999999999987 6999999999999999999999999999
Q ss_pred ChHH--HHHHHhcCCc-cCcCCcccccccCC
Q 006988 146 GLNI--VKKIEQVGTV-KKKKASHVSSSEDS 173 (622)
Q Consensus 146 G~eV--ld~I~~~~t~-~gkp~~~ikIsd~g 173 (622)
||+| |++|+.++++ .+.|...|.|.+|+
T Consensus 160 g~~v~~v~kI~~~~t~~~~~P~~~i~I~~~~ 190 (232)
T 3bkp_A 160 GHTLYNLMKFNDLEVGKEDRPMTPPFIKSVD 190 (232)
T ss_dssp GGGHHHHHHHTTSCBCGGGCBSSCCBEEEEE
T ss_pred eCchHHHHHHHcCCcCCCCCcCCCeEEEEEE
Confidence 7766 8899999985 46788888888775
No 34
>1lop_A Cyclophilin A; rotamase, isomerase-isomerase inhibitor complex; HET: NIT; 1.80A {Escherichia coli} SCOP: b.62.1.1 PDB: 2nul_A 2rs4_A
Probab=100.00 E-value=6.8e-38 Score=299.95 Aligned_cols=146 Identities=33% Similarity=0.524 Sum_probs=129.4
Q ss_pred eEEEEEEeCCceeeeEEEEEcCCCChHHHHHHHHHhhcCCCCCCCCCCCccccCceeEEeecCceEEecCCCCCCCCCCC
Q 006988 8 LVFLDVSIDGDPVEKIVIELFADVVPKTAENFRALCTGEKGIGKSTGKPLHYKGTMFHRIIKGFMIQGGDFSKGNGTGGE 87 (622)
Q Consensus 8 ~V~fDtsigg~~~GrIvIELf~d~APktv~NFl~Lctg~~g~g~~~~k~g~YdGt~F~RVipg~vIQgGd~~~g~g~gg~ 87 (622)
+|.|+|++| +|+||||+++||+||+||++||+ .+||+||.||||+++||||||++..+. +.
T Consensus 1 ~v~l~T~~G-----~i~ieL~~~~aP~t~~NF~~L~~-----------~g~Y~g~~FhRvi~~f~iQgGd~~~~~---g~ 61 (164)
T 1lop_A 1 MVTFHTNHG-----DIVIKTFDDKAPETVKNFLDYCR-----------EGFYNNTIFHRVINGFMIQGGGFEPGM---KQ 61 (164)
T ss_dssp CEEEEETTE-----EEEEEECTTTSHHHHHHHHHHHH-----------TTTTTTEECCEEETTTEEEESSEETTT---EE
T ss_pred CEEEEeCCC-----CEEEEEeCCCCcHHHHHHHHHHh-----------cCCCCCCEEEEEeCCceEecCCcccCC---Cc
Confidence 477888765 99999999999999999999994 469999999999999999999986443 45
Q ss_pred cccCCcccCCCCC-CCCCCCeEEEecc-CCCCCCCceeEEeeccCCCCCCC--------ceEEEEEecChHHHHHHHhcC
Q 006988 88 SIYGGKFTDENFK-LDHNGPGILSMAN-SGANTNGSQFFITFRRQHHLDGK--------HVVFGKVVKGLNIVKKIEQVG 157 (622)
Q Consensus 88 si~g~~~~dE~~~-lkh~~~G~Vsma~-sg~ds~GSqFFItL~d~p~LDgk--------~tVFGkVv~G~eVld~I~~~~ 157 (622)
.+++..|++|+.. +.| .+|+|+||+ .++++++|||||+|.++++||++ |+|||+|++||+||++|+.++
T Consensus 62 ~~~g~~~~dE~~~~l~~-~~G~lsmA~~~~p~s~gSQFfI~~~~~~~Ld~~~~~~~~~~~tvFG~Vv~G~dvv~~I~~~~ 140 (164)
T 1lop_A 62 KATKEPIKNEANNGLKN-TRGTLAMARTQAPHSATAQFFINVVDNDFLNFSGESLQGWGYCVFAEVVDGMDEVDKIKGVA 140 (164)
T ss_dssp CCCCCCBCCCCCSSCCC-CTTEEEECCCSSTTCBCSCEEEESSCCGGGSCCSSSTTTSCCCEEEEEEECHHHHHHHHTSC
T ss_pred CCCCCcccccccccccc-CccEEEEeecCCCCCccceEEEEcCCccccCCccccccCCceEEEEEEecCHHHHHHHHhCC
Confidence 6788999999764 555 699999997 47999999999999999999998 999999999999999999999
Q ss_pred Ccc-----CcCCcccccccCC
Q 006988 158 TVK-----KKKASHVSSSEDS 173 (622)
Q Consensus 158 t~~-----gkp~~~ikIsd~g 173 (622)
++. +.|...|.|.+|.
T Consensus 141 t~~~~~~~~~P~~~v~I~~~~ 161 (164)
T 1lop_A 141 TGRSGMHQDVPKEDVIIESVT 161 (164)
T ss_dssp EEEETTEEEEESSCCEEEEEE
T ss_pred cCCccccCCCcCCCeEEEEEE
Confidence 874 6788889888875
No 35
>3s6m_A Peptidyl-prolyl CIS-trans isomerase; seattle structural genomics center for infectious disease; 1.65A {Burkholderia pseudomallei} SCOP: b.62.1.1 PDB: 3t1u_A*
Probab=100.00 E-value=1.4e-37 Score=298.49 Aligned_cols=149 Identities=34% Similarity=0.485 Sum_probs=130.0
Q ss_pred CCCeEEEEEEeCCceeeeEEEEEcCCCChHHHHHHHHHhhcCCCCCCCCCCCccccCceeEEeecCceEEecCCCCCCCC
Q 006988 5 KNPLVFLDVSIDGDPVEKIVIELFADVVPKTAENFRALCTGEKGIGKSTGKPLHYKGTMFHRIIKGFMIQGGDFSKGNGT 84 (622)
Q Consensus 5 ~np~V~fDtsigg~~~GrIvIELf~d~APktv~NFl~Lctg~~g~g~~~~k~g~YdGt~F~RVipg~vIQgGd~~~g~g~ 84 (622)
.+|.|.|+|++| +|+||||+++||+||+||++||+ .+||+||.||||+++||||||++....
T Consensus 2 p~~~v~l~T~~G-----~i~ieL~~~~aP~t~~NF~~L~~-----------~g~Y~g~~FhRvi~~f~iQgGd~~~~~-- 63 (167)
T 3s6m_A 2 PGSMVELHTNHG-----VIKLELDEAKAPKTVENFLNYVK-----------KGHYDGTIFHRVINGFMIQGGGFEPGL-- 63 (167)
T ss_dssp CCCEEEEEETTE-----EEEEEECTTTCHHHHHHHHHHHH-----------HTTTTTEECCEEETTTEEEESSEETTT--
T ss_pred CCcEEEEEeCCc-----eEEEEEeCCCCcHHHHHHHHHhh-----------hcccCCCEeEEecCCcEEEeccccCCC--
Confidence 578999999876 99999999999999999999995 458999999999999999999986443
Q ss_pred CCCcccCCcccCCCCCCCCCCCeEEEecc-CCCCCCCceeEEeeccCCCCCCC--------ceEEEEEecChHHHHHHHh
Q 006988 85 GGESIYGGKFTDENFKLDHNGPGILSMAN-SGANTNGSQFFITFRRQHHLDGK--------HVVFGKVVKGLNIVKKIEQ 155 (622)
Q Consensus 85 gg~si~g~~~~dE~~~lkh~~~G~Vsma~-sg~ds~GSqFFItL~d~p~LDgk--------~tVFGkVv~G~eVld~I~~ 155 (622)
+..+++..|.+|.....++.+|+|+||+ .++++++|||||+|.++++||++ |+|||+|++||+||++|+.
T Consensus 64 -~~~~~~~~~~~E~~~~l~~~~G~lsmA~~~~p~t~gSQFfI~~~~~~~Ld~~~~~~~~~~~~VFG~Vv~G~dvv~~I~~ 142 (167)
T 3s6m_A 64 -KQKPTDAPIANEANNGLKNDTYTIAMARTNDPHSATAQFFINVNDNEFLNHSSPTPQGWGYAVFGKVVEGQDIVDKIKA 142 (167)
T ss_dssp -EECCCCCCBCCCGGGCCCCCTTEEEECCCSSTTCBCSCEEEESSCCGGGSCCSSSTTTCCCCEEEEEEECHHHHHHHTT
T ss_pred -CCCCCCCccCCcccccccCCccEEEEecCCCCCCccceEEEEcCCchhcCCcccccCCCCceEEEEEEcCHHHHHHHHc
Confidence 2234577888885443344799999999 67999999999999999999998 9999999999999999999
Q ss_pred cCCcc-----CcCCcccccccC
Q 006988 156 VGTVK-----KKKASHVSSSED 172 (622)
Q Consensus 156 ~~t~~-----gkp~~~ikIsd~ 172 (622)
++++. +.|..+|.|.+|
T Consensus 143 ~~t~~~~~~~~~P~~~v~I~~~ 164 (167)
T 3s6m_A 143 VKTGSKGFHQDVPNDDVVIEKA 164 (167)
T ss_dssp SCBBC---CBTCBSSCCEEEEE
T ss_pred CCcCCCcccCCCcCCCeEEEEE
Confidence 99975 688888888765
No 36
>3rfy_A Peptidyl-prolyl CIS-trans isomerase CYP38, chloro; cyclophilin, peptidyl prolyl isomerase, ppiase, TLP,; 2.39A {Arabidopsis thaliana}
Probab=100.00 E-value=3.8e-34 Score=303.65 Aligned_cols=151 Identities=25% Similarity=0.367 Sum_probs=128.6
Q ss_pred CCCeEEEEEEeCCc---eeeeEEEEEcCCCChHHHHHHHHHhhcCCCCCCCCCCCccccCceeEEeecCceEEecCCCCC
Q 006988 5 KNPLVFLDVSIDGD---PVEKIVIELFADVVPKTAENFRALCTGEKGIGKSTGKPLHYKGTMFHRIIKGFMIQGGDFSKG 81 (622)
Q Consensus 5 ~np~V~fDtsigg~---~~GrIvIELf~d~APktv~NFl~Lctg~~g~g~~~~k~g~YdGt~F~RVipg~vIQgGd~~~g 81 (622)
.++.|+|+|++++. .+|+|+||||+++||+||+||++||+ .+||+||.|||| ++|||||||+. +
T Consensus 169 gra~V~m~t~~~~~~~~~~G~I~IeL~~d~AP~Tv~NFl~L~~-----------~GfYdGt~FHRV-~gFmIQgGDp~-g 235 (369)
T 3rfy_A 169 GRASVDMKVKIKDNPNIEDCVFRIVLDGYNAPVTAGNFVDLVE-----------RHFYDGMEIQRS-DGFVVQTGDPE-G 235 (369)
T ss_dssp SEEEEEEEEECCSCSSCSEEEEEEEEETTTCHHHHHHHHHHHH-----------TTTTTTEECEEE-EEEEECCCCCC-C
T ss_pred CCeEEEEEEeccCCCcccceEEEEEEeCCCCcHHHHHHHHHhh-----------cCCcCCCeeeee-CCeeEecCCCC-C
Confidence 56778899987643 58999999999999999999999994 569999999999 99999999986 3
Q ss_pred CCCC---------------------CCcccCCcccCCCC-----CCCCCCCeEEEeccC--CCCCCCceeEEeec-----
Q 006988 82 NGTG---------------------GESIYGGKFTDENF-----KLDHNGPGILSMANS--GANTNGSQFFITFR----- 128 (622)
Q Consensus 82 ~g~g---------------------g~si~g~~~~dE~~-----~lkh~~~G~Vsma~s--g~ds~GSqFFItL~----- 128 (622)
++.+ +..+|+..|.+|++ .++|+.+|+|+||+. ++|+++|||||||.
T Consensus 236 ~G~G~~~~~~g~~~~iP~E~~~~G~g~piyg~~fedegf~~~~~~L~h~~~G~LsMAns~~gPnSngSQFFItl~d~~L~ 315 (369)
T 3rfy_A 236 PAEGFIDPSTEKTRTVPLEIMVTGEKTPFYGSTLEELGLYKAQVVIPFNAFGTMAMAREEFENDSGSSQVFWLLKESELT 315 (369)
T ss_dssp CCSCCCSCCCCCCCSSSSSSCSSSSCCSCCCSSTGGGTEEEEEEEECCCCCCCCCCSSCCCCCCCSSCCCCCCCEEEEEC
T ss_pred CCCCccCcccCcCcccCccccccCCCCCcCCCccccccccccccccccCCCceEEEeecCCCCCCccceEEEEecccccC
Confidence 4433 45678888888754 788999999999997 89999999999994
Q ss_pred --cCCCCCCCceEEEEEecChHHHHHHHhcCCccCcCCcccccccCC
Q 006988 129 --RQHHLDGKHVVFGKVVKGLNIVKKIEQVGTVKKKKASHVSSSEDS 173 (622)
Q Consensus 129 --d~p~LDgk~tVFGkVv~G~eVld~I~~~~t~~gkp~~~ikIsd~g 173 (622)
++++||++|||||+||+|||||++|+. |.++..++|+++.
T Consensus 316 ~~~~~~LDgkytVFG~VveGmdVVdkI~~-----GD~I~sv~I~~g~ 357 (369)
T 3rfy_A 316 PSNSNILDGRYAVFGYVTDNEDFLADLKV-----GDVIESIQVVSGL 357 (369)
T ss_dssp SCCCSSSCSCEEEEEEEEESTTGGGGCCT-----TCEEEEEEEEECG
T ss_pred CCCCcccCCCeeEEEEEecCHHHHHHHhC-----CCceEEEEEecCC
Confidence 689999999999999999999999976 4456666666544
No 37
>2nnz_A Hypothetical protein; beta-barrel, structural genomics, ontario centre for structu proteomics, OCSP, unknown function; NMR {Archaeoglobus fulgidus}
Probab=96.22 E-value=0.0056 Score=57.74 Aligned_cols=104 Identities=18% Similarity=0.208 Sum_probs=60.9
Q ss_pred EEEEeCCceeeeEEEEEcCCCChHHHHHHHHHhhcCCCCCCCCCCCccccCceeEEeecCceEEecCCCCCCCCCCCccc
Q 006988 11 LDVSIDGDPVEKIVIELFADVVPKTAENFRALCTGEKGIGKSTGKPLHYKGTMFHRIIKGFMIQGGDFSKGNGTGGESIY 90 (622)
Q Consensus 11 fDtsigg~~~GrIvIELf~d~APktv~NFl~Lctg~~g~g~~~~k~g~YdGt~F~RVipg~vIQgGd~~~g~g~gg~si~ 90 (622)
|.|++++. .|+++|+.+.||+||+.|+++.= +.... .+. -+ -+.+ ++.
T Consensus 32 I~i~~~~~---~~~a~L~D~~aP~Ta~~f~~~LP--------------l~~~~-~~~-g~-E~y~-~lp----------- 79 (153)
T 2nnz_A 32 LRIRFESA---ECEVELYEEWAPETVRAIADALP--------------IKSTA-NRW-GD-EIYF-TTQ----------- 79 (153)
T ss_dssp EEEEETTE---EEEECCCTTSCHHHHHHHHHTCS--------------EEEEE-EEE-TT-EEEE-CCS-----------
T ss_pred EEEEECCE---EEEEEEcCCCCHHHHHHHHHhCC--------------cEEEH-Hhh-CC-cEEE-ECC-----------
Confidence 55667763 79999999999999999999871 22221 111 11 1111 110
Q ss_pred CCcccC-CCCCCCCCCCeEEEeccCCCCCCCceeEEeeccCCCC------CCCceEEEEEecChHHHHHH
Q 006988 91 GGKFTD-ENFKLDHNGPGILSMANSGANTNGSQFFITFRRQHHL------DGKHVVFGKVVKGLNIVKKI 153 (622)
Q Consensus 91 g~~~~d-E~~~lkh~~~G~Vsma~sg~ds~GSqFFItL~d~p~L------Dgk~tVFGkVv~G~eVld~I 153 (622)
..+.. |+. ......|-|++...+ -.|.|-+++.+.+ -...++||+|++|++.|..|
T Consensus 80 -~~l~~~en~-~~~~~~GDI~Yy~pg-----~~LaIFYg~~p~s~~e~~~as~~~~lG~I~~gle~L~~~ 142 (153)
T 2nnz_A 80 -VAVEKEENS-KDVVELGDVAYWIPG-----KAICLFFGKTPISDDKIRPASAVNVIGRIVNSMEGLKGV 142 (153)
T ss_dssp -CCCCCSSCC-BCCCCTTEEEEETTT-----TEEEEESSCCTTCTTSCCCCSSEEEEEECCSCCCCGGGC
T ss_pred -CCCCCCCCC-cccCCCCeEEEeCCC-----CEEEEEECCccccccccccccccEEEEEEccCHHHHhhC
Confidence 00111 222 223457888876432 2466667666332 22368999999999888654
No 38
>3kop_A Uncharacterized protein; protein with A cyclophilin-like fold, structural genomics, J center for structural genomics, JCSG; 1.90A {Arthrobacter SP}
Probab=95.80 E-value=0.047 Score=52.60 Aligned_cols=33 Identities=15% Similarity=0.327 Sum_probs=25.9
Q ss_pred EEEEEEeCCceee-eEEEEEcCCCChHHHHHHHHHh
Q 006988 9 VFLDVSIDGDPVE-KIVIELFADVVPKTAENFRALC 43 (622)
Q Consensus 9 V~fDtsigg~~~G-rIvIELf~d~APktv~NFl~Lc 43 (622)
-||.|++.. .| .++.+|..+.||+||+.|+++.
T Consensus 22 r~i~itl~~--~g~~~~A~Lldd~APkTcaA~~~~L 55 (188)
T 3kop_A 22 RYINITLEK--RGVTCKALLLDDVAPRTSKAVWDAL 55 (188)
T ss_dssp CEEEEEETT--TTEEEEEEECTTTSHHHHHHHHHHC
T ss_pred eEEEEEEec--CCeEEEEEEccccChHHHHHHHHhC
Confidence 366777652 12 5889999999999999999976
No 39
>1zx8_A Hypothetical protein TM1367; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: 1PE; 1.90A {Thermotoga maritima} SCOP: b.62.1.3 PDB: 2ka0_A
Probab=87.27 E-value=1.8 Score=39.90 Aligned_cols=103 Identities=18% Similarity=0.169 Sum_probs=58.1
Q ss_pred EEEEEeCCceeeeEEEEEcCCCChHHHHHHHHHhhcCCCCCCCCCCCccccCceeEEeecCceEEecCCCCCCCCCCCcc
Q 006988 10 FLDVSIDGDPVEKIVIELFADVVPKTAENFRALCTGEKGIGKSTGKPLHYKGTMFHRIIKGFMIQGGDFSKGNGTGGESI 89 (622)
Q Consensus 10 ~fDtsigg~~~GrIvIELf~d~APktv~NFl~Lctg~~g~g~~~~k~g~YdGt~F~RVipg~vIQgGd~~~g~g~gg~si 89 (622)
-+++-+++. .|+++|+.+ |.||..|+++. +.+.....|- .-+|-.+|-.+
T Consensus 14 ~~~~~~~~~---~v~a~L~Dn--p~Ta~~~~~~L-------Pl~~~~~~~g-~E~y~~~p~~l----------------- 63 (136)
T 1zx8_A 14 RVELLFESG---KCVIDLNEE--YEVVKLLKEKI-------PFESVVNTWG-EEIYFSTPVNV----------------- 63 (136)
T ss_dssp EEEEECSSC---EEEEEEETT--SHHHHHHHHHC-------SEEEECEESS-SEEEEECSCCC-----------------
T ss_pred EEEEeeCCc---EEEEEEcCC--HHHHHHHHHHC-------CcEEEHHHhC-CcEEEECCccC-----------------
Confidence 345555543 789999754 88999999987 2222223342 33322222211
Q ss_pred cCCccc-CCCCCCCCCCCeEEEeccCCCCCCCceeEEeeccCCCCC------CCceEEEEEecChHHHHHH
Q 006988 90 YGGKFT-DENFKLDHNGPGILSMANSGANTNGSQFFITFRRQHHLD------GKHVVFGKVVKGLNIVKKI 153 (622)
Q Consensus 90 ~g~~~~-dE~~~lkh~~~G~Vsma~sg~ds~GSqFFItL~d~p~LD------gk~tVFGkVv~G~eVld~I 153 (622)
. +|+.. .....|-|+....+ ..|.|-+++.+.+. ...+|||+|+.|++.|..+
T Consensus 64 -----~~~e~~~-~~~~~GDIaYw~pg-----g~LaIFyg~~p~s~~e~~~a~~v~~lGrI~~~l~~l~~v 123 (136)
T 1zx8_A 64 -----QKMENPR-EVVEIGDVGYWPPG-----KALCLFFGKTPMSDDKIQPASAVNVIGKIVEGLEDLKKI 123 (136)
T ss_dssp -----CCCSSEE-SSBCTTEEEEEGGG-----TEEEEESSCCTTCSSSBCCSSCEEEEEEEEECGGGGGGC
T ss_pred -----CCCCCCC-ccCCCCcEEEeCCC-----CEEEEEeCCCccccCccccCcCcEEEEEEccCHHHHhhC
Confidence 1 11111 12346788776432 24666666654332 2478999999999988654
No 40
>3q6c_A Probable receptor YHHM; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG; 2.60A {Klebsiella variicola at-22}
Probab=33.11 E-value=24 Score=29.84 Aligned_cols=46 Identities=30% Similarity=0.440 Sum_probs=31.6
Q ss_pred EEEEEEeCCceeeeEEEEEcCCCChHHHHHHHHHhhcCCCCCCCCCCCccccCceeEEeecCc
Q 006988 9 VFLDVSIDGDPVEKIVIELFADVVPKTAENFRALCTGEKGIGKSTGKPLHYKGTMFHRIIKGF 71 (622)
Q Consensus 9 V~fDtsigg~~~GrIvIELf~d~APktv~NFl~Lctg~~g~g~~~~k~g~YdGt~F~RVipg~ 71 (622)
|+|+...+|. +|.|.|- ...|-.|+.|+.| .+.|.|+.|....++-
T Consensus 37 itF~~~~~G~---~~ef~v~-------~~~Y~~l~~Gd~G-------~Lt~QGTRF~~F~~~~ 82 (83)
T 3q6c_A 37 ASFRPENGGL---EVVFRLD-------APQYHALSVGDRG-------MLSYKGTAFVAFTPDP 82 (83)
T ss_dssp EEEEEC--CC---CEEEEEC-------HHHHHHCCTTCEE-------EEEEETTEEEEEEECC
T ss_pred EEEEECCCCc---eEEEEEC-------HHHcCCCCCCCEE-------EEEEeeeEEEEEecCC
Confidence 4555433343 5666664 4588999999876 4689999999887753
Done!