BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 006995
(622 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q0WQF7|OPD21_ARATH Dihydrolipoyllysine-residue acetyltransferase component 1 of
pyruvate dehydrogenase complex, mitochondrial
OS=Arabidopsis thaliana GN=LTA3 PE=1 SV=2
Length = 637
Score = 782 bits (2019), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 412/629 (65%), Positives = 488/629 (77%), Gaps = 16/629 (2%)
Query: 1 MALSRLRQPVIARTLSLFRARLSLSSFSSSTSL-ARISSGKNSFVD----VNGILLRPLS 55
M L R+ IART SL RARL F+ ++ +R S+G D NG+ R S
Sbjct: 1 MVLPLFRRAAIARTSSLLRARL----FAPASEFHSRFSNGLYHLDDKISSSNGV--RSAS 54
Query: 56 STLAPEVHDSPLKLKMQIGVRHFSSSELPSHTVVGMPALSPTMSQGNIAKWRKKEGDKIE 115
L + DS K ++ GV++FSS+ S TV+ MPALSPTMS GN+ KW KKEGDK+E
Sbjct: 55 IDLITRMDDSSPKPILRFGVQNFSSTGPISQTVLAMPALSPTMSHGNVVKWMKKEGDKVE 114
Query: 116 IGDILCEIETDKATVEFESLEEGFLAKILVPEGSKDVPVGQPIAITVEDADDIQHIPATI 175
+GD+LCEIETDKATVEFES EEGFLAKILV EGSKD+PV +PIAI VE+ DDI+++PATI
Sbjct: 115 VGDVLCEIETDKATVEFESQEEGFLAKILVTEGSKDIPVNEPIAIMVEEEDDIKNVPATI 174
Query: 176 AGGAEAKEQSSTHQDVK-KEAVQETSASRINTSELPPRVVLEMPALSPTMNQGNIAKWRK 234
GG + KE++S HQ +K E+ Q+ S+ + + S+LPP VVLEMPALSPTMNQGNIAKW K
Sbjct: 175 EGGRDGKEETSAHQVMKPDESTQQKSSIQPDASDLPPHVVLEMPALSPTMNQGNIAKWWK 234
Query: 235 NEGDKIEVGDVICEIETDKATLEFECLEEGYLAKILAPEGSKDVAVGQPIAITVEDPGDV 294
EGDKIEVGDVI EIETDKATLEFE LEEGYLAKIL PEGSKDVAVG+PIA+ VED +
Sbjct: 235 KEGDKIEVGDVIGEIETDKATLEFESLEEGYLAKILIPEGSKDVAVGKPIALIVEDAESI 294
Query: 295 GTVKNSVTSGAEVKGEKETHHDSKDVVKVQKGSFTKISPSAKLLILEHGLDASSLQASGP 354
+K+S +EV KE D +K FTKISP+AKLLILEHGL+ASS++ASGP
Sbjct: 295 EAIKSSSAGSSEVDTVKEVPDSVVDKPTERKAGFTKISPAAKLLILEHGLEASSIEASGP 354
Query: 355 YGTLLKGDVLAAIKSGKVSSRISSHTEKTSPSPLPQTSTAVSPGSKSDLELSDS-FEDFP 413
YGTLLK DV+AAI S S P +T + S SK + SD+ +EDFP
Sbjct: 355 YGTLLKSDVVAAIAS---GKASKSSASTKKKQPSKETPSKSSSTSKPSVTQSDNNYEDFP 411
Query: 414 NTQIRKVIARRLLESKQNTPHLYLSSDVVLDPLLSFRKELKEKHNTKVSVNDIVIKAVAV 473
N+QIRK+IA+RLLESKQ PHLYL SDVVLDPLL+FRKEL+E H KVSVNDIVIKAVAV
Sbjct: 412 NSQIRKIIAKRLLESKQKIPHLYLQSDVVLDPLLAFRKELQENHGVKVSVNDIVIKAVAV 471
Query: 474 ALKNVPEANAYWDVEKGEIVLCDAIDISIAVATEKGLMTPIVRNADQKSISAISMEVKEL 533
AL+NV +ANA+WD EKG+IV+CD++DISIAVATEKGLMTPI++NADQKSISAIS+EVKEL
Sbjct: 472 ALRNVRQANAFWDAEKGDIVMCDSVDISIAVATEKGLMTPIIKNADQKSISAISLEVKEL 531
Query: 534 AEKARAGKLAPHEFQGGTFSISNLGMFPVDQFCAIINPPQAGILAVGRGNQVVEPVIGSD 593
A+KAR+GKLAPHEFQGGTFSISNLGM+PVD FCAIINPPQAGILAVGRGN+VVEPVIG D
Sbjct: 532 AQKARSGKLAPHEFQGGTFSISNLGMYPVDNFCAIINPPQAGILAVGRGNKVVEPVIGLD 591
Query: 594 GNETPAVVTKMNLTLSADHRVFEGKVGGT 622
G E P+VVTKMN+TLSADHR+F+G+VG +
Sbjct: 592 GIEKPSVVTKMNVTLSADHRIFDGQVGAS 620
>sp|P10515|ODP2_HUMAN Dihydrolipoyllysine-residue acetyltransferase component of pyruvate
dehydrogenase complex, mitochondrial OS=Homo sapiens
GN=DLAT PE=1 SV=3
Length = 647
Score = 390 bits (1002), Expect = e-107, Method: Compositional matrix adjust.
Identities = 244/580 (42%), Positives = 333/580 (57%), Gaps = 52/580 (8%)
Query: 67 LKLKMQIGVRHFSSSELPSHTVVGMPALSPTMSQGNIAKWRKKEGDKIEIGDILCEIETD 126
L+L G R++S LP H V +P+LSPTM G IA+W KKEGDKI GD++ E+ETD
Sbjct: 75 LQLLGSPGRRYYS---LPPHQKVPLPSLSPTMQAGTIARWEKKEGDKINEGDLIAEVETD 131
Query: 127 KATVEFESLEEGFLAKILVPEGSKDVPVGQPIAITVEDADDIQHIP-ATIAGGAEAKEQS 185
KATV FESLEE ++AKILV EG++DVP+G I ITV +DI+ T+ A Q+
Sbjct: 132 KATVGFESLEECYMAKILVAEGTRDVPIGAIICITVGKPEDIEAFKNYTLDSSAAPTPQA 191
Query: 186 STHQDVKKEAVQETSASRINTSELPPRVVLEMPALSPTMNQGNIAKWRKNEGDKIEVGDV 245
+ A T +++ S PP + + +PALSPTM G + +W K G+K+ GD+
Sbjct: 192 APAPTPAATASPPTPSAQAPGSSYPPHMQVLLPALSPTMTMGTVQRWEKKVGEKLSEGDL 251
Query: 246 ICEIETDKATLEFECLEEGYLAKILAPEGSKDVAVGQPIAITVEDPGDVGTVKN-SVTSG 304
+ EIETDKAT+ FE EEGYLAKIL PEG++DV +G P+ I VE D+ + T
Sbjct: 252 LAEIETDKATIGFEVQEEGYLAKILVPEGTRDVPLGTPLCIIVEKEADISAFADYRPTEV 311
Query: 305 AEVKGEKETHHDSKDVVKVQ--------------------KGSFTKISPSAKLLILEHGL 344
++K + KG +SP AK L +E G+
Sbjct: 312 TDLKPQVPPPTPPPVAAVPPTPQPLAPTPSAPCPATPAGPKGRVF-VSPLAKKLAVEKGI 370
Query: 345 DASSLQASGPYGTLLKGDVLAAIKSGKVSSRISSHTEKTSP--SPLPQTSTAVSPGSKSD 402
D + ++ +GP G + K D+ + + S KV+ ++ T P +P+P
Sbjct: 371 DLTQVKGTGPDGRITKKDIDSFVPS-KVAPAPAAVVPPTGPGMAPVP------------- 416
Query: 403 LELSDSFEDFPNTQIRKVIARRLLESKQNTPHLYLSSDVVLDPLLSFRKELKE--KHNTK 460
+ F D P + IR+VIA+RL++SKQ PH YLS DV + +L RKEL + + +K
Sbjct: 417 ---TGVFTDIPISNIRRVIAQRLMQSKQTIPHYYLSIDVNMGEVLLVRKELNKILEGRSK 473
Query: 461 VSVNDIVIKAVAVALKNVPEANAYWDVEKGEIVLCDAIDISIAVATEKGLMTPIVRNADQ 520
+SVND +IKA A+A VPEAN+ W I +D+S+AV+T GL+TPIV NA
Sbjct: 474 ISVNDFIIKASALACLKVPEANSSW--MDTVIRQNHVVDVSVAVSTPAGLITPIVFNAHI 531
Query: 521 KSISAISMEVKELAEKARAGKLAPHEFQGGTFSISNLGMFPVDQFCAIINPPQAGILAVG 580
K + I+ +V LA KAR GKL PHEFQGGTF+ISNLGMF + F AIINPPQA ILA+G
Sbjct: 532 KGVETIANDVVSLATKAREGKLQPHEFQGGTFTISNLGMFGIKNFSAIINPPQACILAIG 591
Query: 581 RGNQVVEPVIGSDGNETPAVVTKMNLTLSADHRVFEGKVG 620
+ P G + V + M++TLS DHRV +G VG
Sbjct: 592 ASEDKLVPADNEKGFD---VASMMSVTLSCDHRVVDGAVG 628
>sp|Q8BMF4|ODP2_MOUSE Dihydrolipoyllysine-residue acetyltransferase component of pyruvate
dehydrogenase complex, mitochondrial OS=Mus musculus
GN=Dlat PE=1 SV=2
Length = 642
Score = 388 bits (997), Expect = e-107, Method: Compositional matrix adjust.
Identities = 240/577 (41%), Positives = 328/577 (56%), Gaps = 51/577 (8%)
Query: 69 LKMQIGVRHFSSSELPSHTVVGMPALSPTMSQGNIAKWRKKEGDKIEIGDILCEIETDKA 128
L+ +G S LP H V +P+LSPTM G IA+W KKEG+KI GD++ E+ETDKA
Sbjct: 73 LRQLLGSPSRRSYSLPPHQKVPLPSLSPTMQAGTIARWEKKEGEKISEGDLIAEVETDKA 132
Query: 129 TVEFESLEEGFLAKILVPEGSKDVPVGQPIAITVEDADDIQHIP-ATIAGGAEAKEQSST 187
TV FESLEE ++AKILVPEG++DVPVG I ITVE DI+ T+ A A Q++
Sbjct: 133 TVGFESLEECYMAKILVPEGTRDVPVGSIICITVEKPQDIEAFKNYTLDLAAAAAPQAAP 192
Query: 188 HQDVKKEAVQETSASRINTSELPPRVVLEMPALSPTMNQGNIAKWRKNEGDKIEVGDVIC 247
A ++ S P + + +PALSPTM G + +W K G+K+ GD++
Sbjct: 193 AAAPAPAAAPAAPSASAPGSSYPTHMQIVLPALSPTMTMGTVQRWEKKVGEKLSEGDLLA 252
Query: 248 EIETDKATLEFECLEEGYLAKILAPEGSKDVAVGQPIAITVEDPGDVGTVKN----SVTS 303
EIETDKAT+ FE EEGYLAKIL PEG++DV +G P+ I VE D+ + VTS
Sbjct: 253 EIETDKATIGFEVQEEGYLAKILVPEGTRDVPLGAPLCIIVEKQEDIAAFADYRPTEVTS 312
Query: 304 GAEVKGEKETHHDSKDVVKVQKGSFTK------------ISPSAKLLILEHGLDASSLQA 351
+ Q + T +SP AK L E G+D + ++
Sbjct: 313 LKPQAAPPAPPPVAAVPPTPQPVAPTPSAAPAGPKGRVFVSPLAKKLAAEKGIDLTQVKG 372
Query: 352 SGPYGTLLKGDVLAAIKS---GKVSSRISSHTEKTSPSPLPQTSTAVSPGSKSDLELSDS 408
+GP G ++K D+ + + S ++ ++ + +P+P +
Sbjct: 373 TGPEGRIIKKDIDSFVPSKAAPAAAAAMAPPGPRVAPAP------------------AGV 414
Query: 409 FEDFPNTQIRKVIARRLLESKQNTPHLYLSSDVVLDPLLSFRKELKE--KHNTKVSVNDI 466
F D P + IR+VIA+RL++SKQ PH YLS DV + +L RKEL + + K+SVND
Sbjct: 415 FTDIPISNIRRVIAQRLMQSKQTIPHYYLSVDVNMGEVLLVRKELNKMLEGKGKISVNDF 474
Query: 467 VIKAVAVALKNVPEANAYWD---VEKGEIVLCDAIDISIAVATEKGLMTPIVRNADQKSI 523
+IKA A+A VPEAN+ W + + +V D+S+AV+T GL+TPIV NA K +
Sbjct: 475 IIKASALACLKVPEANSSWMDTVIRQNHVV-----DVSVAVSTPAGLITPIVFNAHIKGL 529
Query: 524 SAISMEVKELAEKARAGKLAPHEFQGGTFSISNLGMFPVDQFCAIINPPQAGILAVGRGN 583
I+ +V LA KAR GKL PHEFQGGTF+ISNLGMF + F AIINPPQA ILA+G
Sbjct: 530 ETIASDVVSLASKAREGKLQPHEFQGGTFTISNLGMFGIKNFSAIINPPQACILAIGASE 589
Query: 584 QVVEPVIGSDGNETPAVVTKMNLTLSADHRVFEGKVG 620
+ P G + +V M++TLS DHRV +G VG
Sbjct: 590 DKLIPADNEKGFDVASV---MSVTLSCDHRVVDGAVG 623
>sp|P08461|ODP2_RAT Dihydrolipoyllysine-residue acetyltransferase component of pyruvate
dehydrogenase complex, mitochondrial OS=Rattus
norvegicus GN=Dlat PE=1 SV=3
Length = 632
Score = 387 bits (994), Expect = e-106, Method: Compositional matrix adjust.
Identities = 250/625 (40%), Positives = 340/625 (54%), Gaps = 51/625 (8%)
Query: 18 FRARL-SLSSFSSSTSLARISSGKNSFVDVNGILLRPLSSTLAPEVHDSPLKLKMQIGVR 76
FRAR +L + + R SG S+ V + S P L+ +G
Sbjct: 18 FRARWATLKGPRTGPAAVRCGSGIPSY-GVRSLCGWSYGSATVPRNR----ILQQLLGSP 72
Query: 77 HFSSSELPSHTVVGMPALSPTMSQGNIAKWRKKEGDKIEIGDILCEIETDKATVEFESLE 136
S LP H V +P+LSPTM G IA+W KKEG+KI GD++ E+ETDKATV FESLE
Sbjct: 73 SRRSYSLPPHQKVPLPSLSPTMQAGTIARWEKKEGEKISEGDLIAEVETDKATVGFESLE 132
Query: 137 EGFLAKILVPEGSKDVPVGQPIAITVEDADDIQHIPATIAGGAEAKEQSSTHQDVKKEAV 196
E ++AKILVPEG++DVPVG I ITVE DI+ A A Q++ A
Sbjct: 133 ECYMAKILVPEGTRDVPVGSIICITVEKPQDIEAFKNYTLDSATAATQAAPAPAAAPAAA 192
Query: 197 QETSASRINTSELPPRVVLEMPALSPTMNQGNIAKWRKNEGDKIEVGDVICEIETDKATL 256
++ S P + + +PALSPTM G + +W K G+K+ GD++ EIETDKAT+
Sbjct: 193 PAAPSASAPGSSYPVHMQIVLPALSPTMTMGTVQRWEKKVGEKLSEGDLLAEIETDKATI 252
Query: 257 EFECLEEGYLAKILAPEGSKDVAVGQPIAITVEDPGDVGTVKN----SVTSGAEVKGEKE 312
FE EEGYLAKIL PEG++DV +G P+ I VE D+ + VTS
Sbjct: 253 GFEVQEEGYLAKILVPEGTRDVPLGTPLCIIVEKQEDIAAFADYRPTEVTSLKPQAPPPV 312
Query: 313 THHDSKDVVKVQKGSFTK------------ISPSAKLLILEHGLDASSLQASGPYGTLLK 360
+ Q + T +SP AK L E G+D + ++ +GP G ++K
Sbjct: 313 PPPVAAVPPIPQPLAPTPSAAPAGPKGRVFVSPLAKKLAAEKGIDLTQVKGTGPEGRIIK 372
Query: 361 GDVLAAIKSGKVSSRISSHTEKTSPSPLPQTSTAVSPGSKSDLELSDSFEDFPNTQIRKV 420
D+ + + + + ++ +P P + F D P + IR+V
Sbjct: 373 KDIDSFVPTKAAPAAAAAAPPGPRVAPTP----------------AGVFIDIPISNIRRV 416
Query: 421 IARRLLESKQNTPHLYLSSDVVLDPLLSFRKELKE--KHNTKVSVNDIVIKAVAVALKNV 478
IA+RL++SKQ PH YLS DV + +L RKEL + + K+SVND +IKA A+A V
Sbjct: 417 IAQRLMQSKQTIPHYYLSVDVNMGEVLLVRKELNKMLEGKGKISVNDFIIKASALACLKV 476
Query: 479 PEANAYWD---VEKGEIVLCDAIDISIAVATEKGLMTPIVRNADQKSISAISMEVKELAE 535
PEAN+ W + + +V D+S+AV+T GL+TPIV NA K + I+ +V LA
Sbjct: 477 PEANSSWMDTVIRQNHVV-----DVSVAVSTPAGLITPIVFNAHIKGLETIASDVVSLAS 531
Query: 536 KARAGKLAPHEFQGGTFSISNLGMFPVDQFCAIINPPQAGILAVGRGNQVVEPVIGSDGN 595
KAR GKL PHEFQGGTF+ISNLGMF + F AIINPPQA ILA+G + P G
Sbjct: 532 KAREGKLQPHEFQGGTFTISNLGMFGIKNFSAIINPPQACILAIGASEDKLIPADNEKGF 591
Query: 596 ETPAVVTKMNLTLSADHRVFEGKVG 620
+ +V M++TLS DHRV +G VG
Sbjct: 592 DVASV---MSVTLSCDHRVVDGAVG 613
>sp|P36413|ODP2_DICDI Dihydrolipoyllysine-residue acetyltransferase component of pyruvate
dehydrogenase complex, mitochondrial OS=Dictyostelium
discoideum GN=pdhC PE=1 SV=2
Length = 635
Score = 362 bits (930), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 216/553 (39%), Positives = 312/553 (56%), Gaps = 41/553 (7%)
Query: 89 VGMPALSPTMSQGNIAKWRKKEGDKIEIGDILCEIETDKATVEFESLE-EGFLAKILVPE 147
+ MPALSP+M++GNI +W+KKEGD+I+ GD++ E+ETDKAT++F+ + G+LAKIL+PE
Sbjct: 86 ITMPALSPSMTEGNIVQWKKKEGDQIKAGDVIAEVETDKATMDFQYEDGNGYLAKILIPE 145
Query: 148 GSKDVPVGQPIAITVEDADDIQHIPATIAGGAEAKEQSSTHQDVKKEAVQ-ETSASRINT 206
G+K + + +PIAI V +DI+ + + + + SST V++EA + + A + +T
Sbjct: 146 GTKGIEINKPIAIIVSKKEDIE---SAVKNYKPSSQASST--PVQEEAPKPKQEAPKKST 200
Query: 207 SELPPRVVLEMPALSPTMNQGNIAKWRKNEGDKIEVGDVICEIETDKATLEFECLE-EGY 265
P V+ MPALSP+M G IA W K EGD+I+ GD I E+ETDKAT++F+ + GY
Sbjct: 201 KTYPAHKVVGMPALSPSMETGGIASWTKKEGDQIKAGDAIAEVETDKATMDFQYEDGNGY 260
Query: 266 LAKILAPEGSKDVAVGQPIAITVEDPGDVGTVKNSVTSGAEVKGEKETHHDSKDVVKV-- 323
LAKIL P G+ + + QP+ I V++ D + + +
Sbjct: 261 LAKILVPGGTSGIQINQPVCIIVKNKEDCDKFADYSVEEQSSSSSSSSQESTPSSSSSSS 320
Query: 324 ---------------QKGSFTKISPSAKLLILEHGLDASSLQASGPYGTLLKGDVLAAIK 368
+ G +P+A+ G D S++ +GP +LK DVL +
Sbjct: 321 QESTPSQSSSQQTTRKSGERIFATPAARFEASSKGYDLSAINGTGPNNRILKADVLEFV- 379
Query: 369 SGKVSSRISSHTEKTSPSPLPQTSTAVSPGSKSDLELSDSFEDFPNTQIRKVIARRLLES 428
+K + Q T + + S F D P++ IRKV A RL ES
Sbjct: 380 -----------PQKQEVAQQQQQQTTTTTKKPTTPTSSGEFTDIPHSNIRKVTAARLTES 428
Query: 429 KQNTPHLYLSSDVVLDPLLSFRKELKEKHNTKVSVNDIVIKAVAVALKNVPEANAYWDVE 488
KQ PH YL+ + +D LL R EL + K+SVND ++KA A AL++ P N+ W +
Sbjct: 429 KQTIPHYYLTMECRVDKLLKLRSELNAMNTVKISVNDFIVKASAAALRDNPVVNSTWTDQ 488
Query: 489 KGEIVLCDAIDISIAVATEKGLMTPIVRNADQKSISAISMEVKELAEKARAGKLAPHEFQ 548
I IDI++AV T +GL TPIVR D K +++IS VK+LAEKA+ GKL P EF+
Sbjct: 489 --FIRRYHNIDINVAVNTPQGLFTPIVRGVDMKGLNSISTSVKQLAEKAQNGKLHPSEFE 546
Query: 549 GGTFSISNLGMFPVDQFCAIINPPQAGILAVGRGNQVVEPVIGSDGNETPAVVTKMNLTL 608
GTF+ISNLGM + QF A+INPPQA ILAVG V V+ + + T +++TL
Sbjct: 547 SGTFTISNLGMLGIKQFAAVINPPQAAILAVGTTETRV--VLSNKPDSPYETATILSVTL 604
Query: 609 SADHRVFEGKVGG 621
S DHRV +G VG
Sbjct: 605 SCDHRVIDGAVGA 617
Score = 103 bits (258), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 47/90 (52%), Positives = 66/90 (73%), Gaps = 1/90 (1%)
Query: 79 SSSELPSHTVVGMPALSPTMSQGNIAKWRKKEGDKIEIGDILCEIETDKATVEFESLE-E 137
S+ P+H VVGMPALSP+M G IA W KKEGD+I+ GD + E+ETDKAT++F+ +
Sbjct: 199 STKTYPAHKVVGMPALSPSMETGGIASWTKKEGDQIKAGDAIAEVETDKATMDFQYEDGN 258
Query: 138 GFLAKILVPEGSKDVPVGQPIAITVEDADD 167
G+LAKILVP G+ + + QP+ I V++ +D
Sbjct: 259 GYLAKILVPGGTSGIQINQPVCIIVKNKED 288
>sp|Q8RWN9|OPD22_ARATH Dihydrolipoyllysine-residue acetyltransferase component 2 of
pyruvate dehydrogenase complex, mitochondrial
OS=Arabidopsis thaliana GN=At3g13930 PE=1 SV=2
Length = 539
Score = 310 bits (795), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 180/441 (40%), Positives = 259/441 (58%), Gaps = 47/441 (10%)
Query: 205 NTSELPPRVVLEMPALSPTMNQGNIAKWRKNEGDKIEVGDVICEIETDKATLEFECLEEG 264
++S+LPP + MP+LSPTM +GNIA+W K EGDK+ G+V+CE+ETDKAT+E EC+EEG
Sbjct: 104 SSSDLPPHQEIGMPSLSPTMTEGNIARWLKKEGDKVAPGEVLCEVETDKATVEMECMEEG 163
Query: 265 YLAKILAPEGSKDVAVGQPIAITVEDPGDVGTVKNSVTSG-------------AEVKGEK 311
+LAKI+ EG+K++ VG+ IAITVED D+ K+ S + K EK
Sbjct: 164 FLAKIVKEEGAKEIQVGEVIAITVEDEDDIQKFKDYTPSSDTGPAAPEAKPAPSLPKEEK 223
Query: 312 ETHHDSKDVVKVQKGSFTK------ISPSAKLLILEHGLDASSLQASGPYGTLLKGDVLA 365
S K+ K S SP A+ L ++ + SS++ +GP G ++K DV
Sbjct: 224 VEKPASAPEAKISKPSSAPSEDRIFASPLARKLAEDNNVPLSSIKGTGPEGRIVKADVED 283
Query: 366 AIKSGKVSSRISSHTEKTSPSPLPQTSTAVSPGSKSDLELSDSFEDFPNTQIRKVIARRL 425
+ SG +++T+ P Q + V + + D P+TQIRKV A RL
Sbjct: 284 FLASG---------SKETTAKPSKQVDSKVP---------ALDYVDIPHTQIRKVTASRL 325
Query: 426 LESKQNTPHLYLSSDVVLDPLLSFRKELKEKHNT----KVSVNDIVIKAVAVALKNVPEA 481
SKQ PH YL+ D +D ++ R +L ++SVND+VIKA A+AL+ VP+
Sbjct: 326 AFSKQTIPHYYLTVDTCVDKMMGLRSQLNSFQEASGGKRISVNDLVIKAAALALRKVPQC 385
Query: 482 NAYWDVEKGEIVLCDAIDISIAVATEKGLMTPIVRNADQKSISAISMEVKELAEKARAGK 541
N+ W E I ++I++AV TE GL P+V++AD+K +S I EV+ LA+KA+
Sbjct: 386 NSSWTDEY--IRQFKNVNINVAVQTENGLYVPVVKDADKKGLSTIGEEVRFLAQKAKENS 443
Query: 542 LAPHEFQGGTFSISNLGM-FPVDQFCAIINPPQAGILAVGRGNQVVEPVIGSDGNETPAV 600
L P +++GGTF++SNLG F + QFCA+INPPQA ILA+G + V P G D V
Sbjct: 444 LKPEDYEGGTFTVSNLGGPFGIKQFCAVINPPQAAILAIGSAEKRVVPGTGPDQYN---V 500
Query: 601 VTKMNLTLSADHRVFEGKVGG 621
+ M++TLS DHRV +G +G
Sbjct: 501 ASYMSVTLSCDHRVIDGAIGA 521
Score = 145 bits (365), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 80/172 (46%), Positives = 113/172 (65%), Gaps = 6/172 (3%)
Query: 2 ALSRLRQPVIARTLSLFRARLSLSSFSSSTSLARISSGKNSFVDVNGILLRPLSSTLA-P 60
S P + +F+ARL+ +SS +++ +G + + LSS +A P
Sbjct: 29 CFSNSTHPSLVGREDIFKARLN---YSSVERISKCGTGNVTMLSGISTTSTKLSSPMAGP 85
Query: 61 EVHDSPLKLKMQIGVRHFSSS-ELPSHTVVGMPALSPTMSQGNIAKWRKKEGDKIEIGDI 119
++ + +M+ VR FSSS +LP H +GMP+LSPTM++GNIA+W KKEGDK+ G++
Sbjct: 86 KLFKEFISSQMR-SVRGFSSSSDLPPHQEIGMPSLSPTMTEGNIARWLKKEGDKVAPGEV 144
Query: 120 LCEIETDKATVEFESLEEGFLAKILVPEGSKDVPVGQPIAITVEDADDIQHI 171
LCE+ETDKATVE E +EEGFLAKI+ EG+K++ VG+ IAITVED DDIQ
Sbjct: 145 LCEVETDKATVEMECMEEGFLAKIVKEEGAKEIQVGEVIAITVEDEDDIQKF 196
>sp|Q5M729|OPD23_ARATH Dihydrolipoyllysine-residue acetyltransferase component 3 of
pyruvate dehydrogenase complex, mitochondrial
OS=Arabidopsis thaliana GN=At1g54220 PE=1 SV=1
Length = 539
Score = 306 bits (783), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 182/441 (41%), Positives = 257/441 (58%), Gaps = 51/441 (11%)
Query: 207 SELPPRVVLEMPALSPTMNQGNIAKWRKNEGDKIEVGDVICEIETDKATLEFECLEEGYL 266
S+LPP + MP+LSPTM +GNIA+W K EGDK+ G+V+CE+ETDKAT+E EC+EEGYL
Sbjct: 106 SDLPPHQEIGMPSLSPTMTEGNIARWLKKEGDKVAPGEVLCEVETDKATVEMECMEEGYL 165
Query: 267 AKILAPEGSKDVAVGQPIAITVEDPGDVGTVKNSVTSG-------------AEVKGEKET 313
AKI+ EGSK++ VG+ IAITVED D+G K+ S A K EK
Sbjct: 166 AKIVKAEGSKEIQVGEVIAITVEDEEDIGKFKDYTPSSTADAAPTKAEPTPAPPKEEKVK 225
Query: 314 HHDSKDVVKVQK------GSFTKISPSAKLLILEHGLDASSLQASGPYGTLLKGDVLAAI 367
S K K G SP A+ L ++ + S ++ +GP G ++K D+ +
Sbjct: 226 QPSSPPEPKASKPSTPPTGDRVFASPLARKLAEDNNVPLSDIEGTGPEGRIVKADIDEYL 285
Query: 368 -KSGK-VSSRISSHTEKTSPSPLPQTSTAVSPGSKSDLELSDSFEDFPNTQIRKVIARRL 425
SGK +++ S T+ +P + + D P++QIRKV A RL
Sbjct: 286 ASSGKGATAKPSKSTDSKAP--------------------ALDYVDIPHSQIRKVTASRL 325
Query: 426 LESKQNTPHLYLSSDVVLDPLLSFRKEL---KEKHNTK-VSVNDIVIKAVAVALKNVPEA 481
SKQ PH YL+ D +D L++ R +L KE K +SVND+V+KA A+AL+ VP+
Sbjct: 326 AFSKQTIPHYYLTVDTCVDKLMALRSQLNSFKEASGGKRISVNDLVVKAAALALRKVPQC 385
Query: 482 NAYWDVEKGEIVLCDAIDISIAVATEKGLMTPIVRNADQKSISAISMEVKELAEKARAGK 541
N+ W + I ++I++AV TE GL P+V++AD+K +S I EV+ LA+KA+
Sbjct: 386 NSSWTDDY--IRQFKNVNINVAVQTENGLYVPVVKDADRKGLSTIGEEVRLLAQKAKENS 443
Query: 542 LAPHEFQGGTFSISNL-GMFPVDQFCAIINPPQAGILAVGRGNQVVEPVIGSDGNETPAV 600
L P +++GGTF++SNL G F + QFCA++NPPQA ILAVG + V P G D
Sbjct: 444 LKPEDYEGGTFTVSNLGGPFGIKQFCAVVNPPQAAILAVGSAEKRVVPGNGPDQFN---F 500
Query: 601 VTKMNLTLSADHRVFEGKVGG 621
+ M +TLS DHRV +G +G
Sbjct: 501 ASYMPVTLSCDHRVVDGAIGA 521
Score = 138 bits (347), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 81/175 (46%), Positives = 109/175 (62%), Gaps = 15/175 (8%)
Query: 54 LSSTLAPEVHDSPLKLKMQIGVRHFSS-SELPSHTVVGMPALSPTMSQGNIAKWRKKEGD 112
LSS + + MQ R FSS S+LP H +GMP+LSPTM++GNIA+W KKEGD
Sbjct: 79 LSSAMGRPIFGKEFSCLMQ-SARGFSSGSDLPPHQEIGMPSLSPTMTEGNIARWLKKEGD 137
Query: 113 KIEIGDILCEIETDKATVEFESLEEGFLAKILVPEGSKDVPVGQPIAITVEDADDI---- 168
K+ G++LCE+ETDKATVE E +EEG+LAKI+ EGSK++ VG+ IAITVED +DI
Sbjct: 138 KVAPGEVLCEVETDKATVEMECMEEGYLAKIVKAEGSKEIQVGEVIAITVEDEEDIGKFK 197
Query: 169 QHIPATIAGGAEAKEQSSTHQDVKKEAVQETSASRINTSELPPRVVLEMPALSPT 223
+ P++ A A K + T K+E V++ S+ PP P+ PT
Sbjct: 198 DYTPSSTADAAPTKAE-PTPAPPKEEKVKQPSS--------PPEPKASKPSTPPT 243
>sp|O59816|ODP2_SCHPO Dihydrolipoyllysine-residue acetyltransferase component of pyruvate
dehydrogenase complex, mitochondrial
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=lat1 PE=3 SV=1
Length = 483
Score = 298 bits (763), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 193/460 (41%), Positives = 250/460 (54%), Gaps = 52/460 (11%)
Query: 191 VKKEA---VQETSASRINTSELPPRVVLEMPALSPTMNQGNIAKWRKNEGDKIEVGDVIC 247
VKK A V A T P V+ MPALSPTM GNI ++K GDKIE GDV+C
Sbjct: 29 VKKSALYPVMAKLARTYATKNYPAHTVINMPALSPTMTTGNIGAFQKKIGDKIEPGDVLC 88
Query: 248 EIETDKATLEFECLEEGYLAKILAPEGSKDVAVGQPIAITVEDPGDVGTVKN-------- 299
EIETDKA ++FE +EGYLAKIL G+KDV VG+P+A+TVE+ GDV + +
Sbjct: 89 EIETDKAQIDFEQQDEGYLAKILIETGTKDVPVGKPLAVTVENEGDVAAMADFTIEDSSA 148
Query: 300 ---SVTSGAEV------KGEKETHHDSKDVVKVQKGSFTKISPSAKLLILEHGLDASSLQ 350
S SG E K KET S +V ++G SP A+ L E LD S ++
Sbjct: 149 KEPSAKSGEEKSAPSSEKQSKETSSPS-NVSGEERGDRVFASPLARKLAEEKDLDLSQIR 207
Query: 351 ASGPYGTLLKGDVLAAIKSGKVSSRISSHTEKTSPSPLPQTST------AVSPGSKSDLE 404
SGP G ++K D+ E P P+ S S +D
Sbjct: 208 GSGPNGRIIKVDI-----------------ENFKPVVAPKPSNEAAAKATTPAASAADAA 250
Query: 405 LSDSFEDFPNTQIRKVIARRLLESKQNTPHLYLSSDVVLDPLLSFRKELKEKHN--TKVS 462
+ED P + +RK+IA RL ESK PH Y++ V ++ ++ R L + K+S
Sbjct: 251 APGDYEDLPLSNMRKIIASRLAESKNMNPHYYVTVSVNMEKIIRLRAALNAMADGRYKLS 310
Query: 463 VNDIVIKAVAVALKNVPEANAYWDVEKGEIVL-CDAIDISIAVATEKGLMTPIVRNADQK 521
VND+VIKA AL+ VPE NA W G+ + +DIS+AVAT GL+TP++RN
Sbjct: 311 VNDLVIKATTAALRQVPEVNAAW---MGDFIRQYKNVDISMAVATPSGLITPVIRNTHAL 367
Query: 522 SISAISMEVKELAEKARAGKLAPHEFQGGTFSISNLGMFPVDQFCAIINPPQAGILAVGR 581
++ IS K+ ++AR KL P E+QGGTF+ISNLGMFPVDQF AIINPPQA ILAVG
Sbjct: 368 GLAEISTLAKDYGQRARNNKLKPEEYQGGTFTISNLGMFPVDQFTAIINPPQACILAVGT 427
Query: 582 GNQVVEPVIGSDGNETPAVVTKMNLTLSADHRVFEGKVGG 621
V P S + V M TLS+DHRV +G +
Sbjct: 428 TVDTVVP--DSTSEKGFKVAPIMKCTLSSDHRVVDGAMAA 465
Score = 133 bits (334), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 71/159 (44%), Positives = 102/159 (64%), Gaps = 6/159 (3%)
Query: 61 EVHDSPLKLKMQIGVRHFSSSELPSHTVVGMPALSPTMSQGNIAKWRKKEGDKIEIGDIL 120
+V S L M R +++ P+HTV+ MPALSPTM+ GNI ++KK GDKIE GD+L
Sbjct: 28 QVKKSALYPVMAKLARTYATKNYPAHTVINMPALSPTMTTGNIGAFQKKIGDKIEPGDVL 87
Query: 121 CEIETDKATVEFESLEEGFLAKILVPEGSKDVPVGQPIAITVEDADDIQHIPATIAGGAE 180
CEIETDKA ++FE +EG+LAKIL+ G+KDVPVG+P+A+TVE+ D+ + +
Sbjct: 88 CEIETDKAQIDFEQQDEGYLAKILIETGTKDVPVGKPLAVTVENEGDVAAMADFTIEDSS 147
Query: 181 AKEQSSTHQDVK------KEAVQETSASRINTSELPPRV 213
AKE S+ + K K++ + +S S ++ E RV
Sbjct: 148 AKEPSAKSGEEKSAPSSEKQSKETSSPSNVSGEERGDRV 186
>sp|O66119|ODP2_ZYMMO Dihydrolipoyllysine-residue acetyltransferase component of pyruvate
dehydrogenase complex OS=Zymomonas mobilis subsp.
mobilis (strain ATCC 31821 / ZM4 / CP4) GN=pdhC PE=3
SV=2
Length = 440
Score = 297 bits (761), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 185/442 (41%), Positives = 251/442 (56%), Gaps = 68/442 (15%)
Query: 215 LEMPALSPTMNQGNIAKWRKNEGDKIEVGDVICEIETDKATLEFECLEEGYLAKILAPEG 274
++MPALSPTM +G +AKW EGD ++ GD++ EIETDKA +EFE ++ G +AKIL PEG
Sbjct: 5 VKMPALSPTMTEGTLAKWLVKEGDAVKAGDILAEIETDKAIMEFETVDAGIIAKILVPEG 64
Query: 275 SKDVAVGQPIAITVEDPGDVGTVKNSVTS-------GAEVKGEKETHHDSKDVV------ 321
S+++AVGQ IA+ E DV V S +S A+V +KET DS+ +
Sbjct: 65 SENIAVGQVIAVMAEAGEDVSQVAASASSQISEPSEKADV-AQKETA-DSETISIDASLD 122
Query: 322 ------------------KVQKGSFTKISPSAKLLILEHGLDASSLQASGPYGTLLKGDV 363
+K K SP AK L ++ +D + SGP+G ++K D+
Sbjct: 123 KAISNAGYGNKTENMTASYQEKAGRIKASPLAKRLAKKNHVDLKQVNGSGPHGRIIKADI 182
Query: 364 LAAIKSGKVSSRISSHTEKTSPSPLPQTSTAVSPGSKSDLELSDSFEDFPNTQI-----R 418
A I E S P ST + G + D P+ I R
Sbjct: 183 EAFI------------AEANQASSNPSVSTPEASGKIT--------HDTPHNSIKLSNMR 222
Query: 419 KVIARRLLESKQNTPHLYLSSDVVLDPLLSFRKELKEK---HNTKVSVNDIVIKAVAVAL 475
+VIARRL ESKQN PH+YL+ DV +D LL R EL E N K+SVND++IKA A+AL
Sbjct: 223 RVIARRLTESKQNIPHIYLTVDVQMDALLKLRSELNESLAVQNIKISVNDMLIKAQALAL 282
Query: 476 KNVPEANAYWDVEKGEIVLCDAIDISIAVATEKGLMTPIVRNADQKSISAISMEVKELAE 535
K P N +D + +++ DIS+AV+ E GL+TPI++ AD KS+SA+S+E+KEL
Sbjct: 283 KATPNVNVAFDGD--QMLQFSQADISVAVSVEGGLITPILKQADTKSLSALSVEMKELIA 340
Query: 536 KARAGKLAPHEFQGGTFSISNLGMFPVDQFCAIINPPQAGILAVGRGNQVVEPVIGSDGN 595
+AR G+L P E+QGGT SISN+GMF + QF A+INPPQA ILA+G G + P + D
Sbjct: 341 RAREGRLQPQEYQGGTSSISNMGMFGIKQFNAVINPPQASILAIGSGER--RPWVIDDAI 398
Query: 596 ETPAVVTKMNLTLSADHRVFEG 617
V T +T S DHRV +G
Sbjct: 399 TIATVAT---ITGSFDHRVIDG 417
Score = 110 bits (275), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 49/86 (56%), Positives = 67/86 (77%)
Query: 89 VGMPALSPTMSQGNIAKWRKKEGDKIEIGDILCEIETDKATVEFESLEEGFLAKILVPEG 148
V MPALSPTM++G +AKW KEGD ++ GDIL EIETDKA +EFE+++ G +AKILVPEG
Sbjct: 5 VKMPALSPTMTEGTLAKWLVKEGDAVKAGDILAEIETDKAIMEFETVDAGIIAKILVPEG 64
Query: 149 SKDVPVGQPIAITVEDADDIQHIPAT 174
S+++ VGQ IA+ E +D+ + A+
Sbjct: 65 SENIAVGQVIAVMAEAGEDVSQVAAS 90
>sp|Q1RJT3|ODP2_RICBR Dihydrolipoyllysine-residue acetyltransferase component of pyruvate
dehydrogenase complex OS=Rickettsia bellii (strain
RML369-C) GN=pdhC PE=3 SV=1
Length = 418
Score = 292 bits (747), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 182/434 (41%), Positives = 254/434 (58%), Gaps = 64/434 (14%)
Query: 213 VVLEMPALSPTMNQGNIAKWRKNEGDKIEVGDVICEIETDKATLEFECLEEGYLAKILAP 272
+ L MPALSPTM +GN+A+W K EGDKI G+VI EIETDKAT+E E ++EG LAKI+ P
Sbjct: 3 IKLLMPALSPTMTEGNLARWLKKEGDKINPGEVIAEIETDKATMEVEAVDEGTLAKIIIP 62
Query: 273 EGSKDVAVGQPIAITVEDPGDVGTV-------------KNSVTSGAE------VKGEKET 313
+GS++V V IA+ +E+ ++ + K ++ AE VK E T
Sbjct: 63 QGSQNVPVNSLIAVLIEEGEELSGIEEFIAKNNSNSPKKEEISKPAETIAPQNVKEENIT 122
Query: 314 HHDSKDVVKVQKGSFTKISPSAKLLILEHGLDASSLQASGPYGTLLKGDVLAAIKSGKVS 373
++ +KV F SP AK L + ++ SGP+G ++K DVL+ K G S
Sbjct: 123 TASDQNNIKV----FA--SPLAKRLAKIQNVRIEEIKGSGPHGRIIKQDVLSH-KGG--S 173
Query: 374 SRISSHTEKTSPSPLPQTSTAVSPGSKSDLELSDSFEDFPNTQIRKVIARRLLESKQNTP 433
+S+ +P + + PN IRK+IA+RLLESKQ P
Sbjct: 174 KALSNKIVSRNP---------------------EEYRLAPNNNIRKIIAKRLLESKQTVP 212
Query: 434 HLYLSSDVVLDPLLSFRKELK----EKHNTKVSVNDIVIKAVAVALKNVPEANAYWDVEK 489
H YLS + +D LL R+++ + + K+SVND +I AVA AL+ VP ANA W +
Sbjct: 213 HFYLSIECNVDKLLDIREDINKSFGDDKSAKISVNDFIILAVAKALQEVPNANASWGDDA 272
Query: 490 GEIVLCDAIDISIAVATEKGLMTPIVRNADQKSISAISMEVKELAEKARAGKLAPHEFQG 549
I + +DIS+AVA E GL+TPI+RNADQK+I +S E+K L +KAR KL P EFQG
Sbjct: 273 --IRYYNNVDISVAVAIENGLVTPIIRNADQKNIVDLSSEMKGLIKKARENKLTPEEFQG 330
Query: 550 GTFSISNLGMFPVDQFCAIINPPQAGILAVGRGNQ--VVEPVIGSDGNETPAVVTKMNLT 607
G F+ISNLGM+ + F AIINPPQ+ I+ VG ++ +V+ N+ ++ T M++T
Sbjct: 331 GGFTISNLGMYGIKNFNAIINPPQSCIMGVGSSSKRAIVK-------NDQISIATIMDVT 383
Query: 608 LSADHRVFEGKVGG 621
LSADHRV +G VG
Sbjct: 384 LSADHRVVDGAVGA 397
Score = 107 bits (268), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 48/86 (55%), Positives = 70/86 (81%)
Query: 91 MPALSPTMSQGNIAKWRKKEGDKIEIGDILCEIETDKATVEFESLEEGFLAKILVPEGSK 150
MPALSPTM++GN+A+W KKEGDKI G+++ EIETDKAT+E E+++EG LAKI++P+GS+
Sbjct: 7 MPALSPTMTEGNLARWLKKEGDKINPGEVIAEIETDKATMEVEAVDEGTLAKIIIPQGSQ 66
Query: 151 DVPVGQPIAITVEDADDIQHIPATIA 176
+VPV IA+ +E+ +++ I IA
Sbjct: 67 NVPVNSLIAVLIEEGEELSGIEEFIA 92
>sp|Q92HK7|ODP2_RICCN Dihydrolipoyllysine-residue acetyltransferase component of pyruvate
dehydrogenase complex OS=Rickettsia conorii (strain ATCC
VR-613 / Malish 7) GN=pdhC PE=3 SV=1
Length = 412
Score = 291 bits (744), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 179/425 (42%), Positives = 250/425 (58%), Gaps = 57/425 (13%)
Query: 217 MPALSPTMNQGNIAKWRKNEGDKIEVGDVICEIETDKATLEFECLEEGYLAKILAPEGSK 276
MPALSPTM +GN+A+W K EGDK+ G+VI EIETDKAT+E E ++EG LAKI+ P+ S+
Sbjct: 7 MPALSPTMTEGNLARWLKKEGDKVNPGEVIAEIETDKATMEVEAVDEGILAKIVIPQNSQ 66
Query: 277 DVAVGQPIAITVEDPG-----DVGTVKNSVTS-----GAEVKGEKETHHDSKDVVKVQKG 326
+V V IA+ E+ D KN+ S A + E + ++ V V K
Sbjct: 67 NVPVNSLIAVLSEEGEEKTDIDAFIAKNNSVSPSPKTDANLPKPHENIANVEEQVTVIKH 126
Query: 327 SFTKI--SPSAKLLILEHGLDASSLQASGPYGTLLKGDVLAAIKSGKVSSRISSHTEKTS 384
++I SP AK L + S++ SGP+G ++K D+L+ S ++H + S
Sbjct: 127 DVSRIFASPLAKRLAKMRNIRFESVKGSGPHGRIVKQDILSYTPS-------TAHNKIVS 179
Query: 385 PSPLPQTSTAVSPGSKSDLELSDSFEDFPNTQIRKVIARRLLESKQNTPHLYLSSDVVLD 444
+P + + PN IRK+IA+RLLESKQ PH YLS + +D
Sbjct: 180 RNP-------------------EEYRLVPNNNIRKIIAKRLLESKQTVPHFYLSIECNVD 220
Query: 445 PLLSFRKELK----EKHNTKVSVNDIVIKAVAVALKNVPEANAYWDVEKGE--IVLCDAI 498
LL R+++ E +T++SVND +I AVA AL+ VP ANA W GE I + +
Sbjct: 221 KLLDIREDINKFFSEDKSTRISVNDFIILAVAKALQEVPNANASW----GEDAIRYYNNV 276
Query: 499 DISIAVATEKGLMTPIVRNADQKSISAISMEVKELAEKARAGKLAPHEFQGGTFSISNLG 558
DIS+AVA E GL+TPIV+NA+QK+I +S E+K L +KA+ KL P EFQGG F+ISNLG
Sbjct: 277 DISVAVAIENGLVTPIVKNANQKNILELSREMKALIKKAKDNKLTPEEFQGGGFTISNLG 336
Query: 559 MFPVDQFCAIINPPQAGILAVGRGNQ--VVEPVIGSDGNETPAVVTKMNLTLSADHRVFE 616
M+ + F AIINPPQ+ I+ VG + +V+ N+ + T M++TLSADHRV +
Sbjct: 337 MYGIKNFNAIINPPQSCIMGVGASAKRAIVK-------NDQITIATIMDVTLSADHRVVD 389
Query: 617 GKVGG 621
G VG
Sbjct: 390 GAVGA 394
Score = 103 bits (257), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 47/86 (54%), Positives = 68/86 (79%)
Query: 91 MPALSPTMSQGNIAKWRKKEGDKIEIGDILCEIETDKATVEFESLEEGFLAKILVPEGSK 150
MPALSPTM++GN+A+W KKEGDK+ G+++ EIETDKAT+E E+++EG LAKI++P+ S+
Sbjct: 7 MPALSPTMTEGNLARWLKKEGDKVNPGEVIAEIETDKATMEVEAVDEGILAKIVIPQNSQ 66
Query: 151 DVPVGQPIAITVEDADDIQHIPATIA 176
+VPV IA+ E+ ++ I A IA
Sbjct: 67 NVPVNSLIAVLSEEGEEKTDIDAFIA 92
>sp|Q4ULG1|ODP2_RICFE Dihydrolipoyllysine-residue acetyltransferase component of pyruvate
dehydrogenase complex OS=Rickettsia felis (strain ATCC
VR-1525 / URRWXCal2) GN=pdhC PE=3 SV=1
Length = 412
Score = 287 bits (734), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 180/425 (42%), Positives = 246/425 (57%), Gaps = 57/425 (13%)
Query: 217 MPALSPTMNQGNIAKWRKNEGDKIEVGDVICEIETDKATLEFECLEEGYLAKILAPEGSK 276
MP LSPTM +GN+A+W K EGDK+ G+VI EIETDKAT+E E ++EG LAKI+ P+ S+
Sbjct: 7 MPVLSPTMTEGNLARWLKKEGDKVNPGEVIAEIETDKATMEVEAVDEGILAKIVIPQNSQ 66
Query: 277 DVAVGQPIAITVEDPG-----DVGTVKNSVTS-----GAEVKGEKETHHDSKDVVKVQKG 326
+V V IA+ E+ D KN+ S A + E ++ V V K
Sbjct: 67 NVPVNSLIAVLSEEGEEKTDIDAFIAKNNNVSPSPKTDANLPKPHENIAKVEEQVAVIKH 126
Query: 327 SFTKI--SPSAKLLILEHGLDASSLQASGPYGTLLKGDVLAAIKSGKVSSRISSHTEKTS 384
+KI SP AK L + S++ SGP+G ++K D+L+ S + H + S
Sbjct: 127 DASKIFASPLAKRLAKMGNIRLESVKGSGPHGRIVKQDILSYTPS-------TVHNKIVS 179
Query: 385 PSPLPQTSTAVSPGSKSDLELSDSFEDFPNTQIRKVIARRLLESKQNTPHLYLSSDVVLD 444
+P + + PN IRK+IA+RLLESKQ PH YLS + +D
Sbjct: 180 RNP-------------------EEYRLVPNNNIRKIIAKRLLESKQTVPHFYLSIECNVD 220
Query: 445 PLLSFR----KELKEKHNTKVSVNDIVIKAVAVALKNVPEANAYWDVEKGE--IVLCDAI 498
LL R K E +T++SVND +I AVA AL+ +P ANA W GE I + +
Sbjct: 221 KLLDIREDINKSFSEDKSTRISVNDFIILAVAKALQELPNANASW----GEDAIRYHNNV 276
Query: 499 DISIAVATEKGLMTPIVRNADQKSISAISMEVKELAEKARAGKLAPHEFQGGTFSISNLG 558
DIS+AVA E GL+TPIV+NA+QK+I +S E+KEL +KA+ KL P EFQGG F+ISNLG
Sbjct: 277 DISVAVAIENGLVTPIVKNANQKNIIELSREMKELIKKAKDNKLTPEEFQGGGFTISNLG 336
Query: 559 MFPVDQFCAIINPPQAGILAVGRGNQ--VVEPVIGSDGNETPAVVTKMNLTLSADHRVFE 616
M+ + F AIINPPQ+ I+ VG + +V+ N+ + T M++TLSADHRV +
Sbjct: 337 MYGIKNFNAIINPPQSCIMGVGASAKRAIVK-------NDQVTIATIMDVTLSADHRVVD 389
Query: 617 GKVGG 621
G VG
Sbjct: 390 GAVGA 394
Score = 103 bits (256), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 57/134 (42%), Positives = 84/134 (62%), Gaps = 11/134 (8%)
Query: 91 MPALSPTMSQGNIAKWRKKEGDKIEIGDILCEIETDKATVEFESLEEGFLAKILVPEGSK 150
MP LSPTM++GN+A+W KKEGDK+ G+++ EIETDKAT+E E+++EG LAKI++P+ S+
Sbjct: 7 MPVLSPTMTEGNLARWLKKEGDKVNPGEVIAEIETDKATMEVEAVDEGILAKIVIPQNSQ 66
Query: 151 DVPVGQPIAITVEDADDIQHIPATIAGGAEAKEQSST-------HQDVKK----EAVQET 199
+VPV IA+ E+ ++ I A IA T H+++ K AV +
Sbjct: 67 NVPVNSLIAVLSEEGEEKTDIDAFIAKNNNVSPSPKTDANLPKPHENIAKVEEQVAVIKH 126
Query: 200 SASRINTSELPPRV 213
AS+I S L R+
Sbjct: 127 DASKIFASPLAKRL 140
>sp|Q19749|ODP2_CAEEL Dihydrolipoyllysine-residue acetyltransferase component of pyruvate
dehydrogenase complex, mitochondrial OS=Caenorhabditis
elegans GN=F23B12.5 PE=1 SV=1
Length = 507
Score = 286 bits (732), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 183/450 (40%), Positives = 244/450 (54%), Gaps = 65/450 (14%)
Query: 205 NTSELPPRVVLEMPALSPTMNQGNIAKWRKNEGDKIEVGDVICEIETDKATLEFECLEEG 264
++ LP + +PALSPTM G + W+K EGD++ GD++CEIETDKAT+ FE EEG
Sbjct: 70 SSGNLPKHNRVALPALSPTMELGTVVSWQKKEGDQLSEGDLLCEIETDKATMGFETPEEG 129
Query: 265 YLAKILAPEGSKDVAVGQPIAITVEDPGDVGTVKNSVTSGAEVKGEKETHHDSKDVVK-- 322
YLAKIL EGSKDV +G+ + I V++ DV K+ GA G + + K
Sbjct: 130 YLAKILIQEGSKDVPIGKLLCIIVDNEADVAAFKDFKDDGASSGGSAPAAEKAPEPAKPA 189
Query: 323 -----------VQKGSFTK-------------ISPSAKLLILEHGLDASSLQASGPYGTL 358
Q S K SP AK L E+GLD S + SGP G +
Sbjct: 190 ASSQPSPPAQMYQAPSVPKSAPIPHSSSGRVSASPFAKKLAAENGLDLSGVSGSGPGGRI 249
Query: 359 LKGDVLAAIKSGKVSSRISSHTEKTSPSPLPQTSTAVSPGSKSDLELSDSFEDFPNTQIR 418
L D+ A G S+ T+ AVS + D P + +R
Sbjct: 250 LASDLSQAPAKGATST----------------TTQAVS---------GQDYTDIPLSNMR 284
Query: 419 KVIARRLLESKQNTPHLYLSSDVVLDPLLSFRKELK-------EKHNTKVSVNDIVIKAV 471
K IA+RL ESK PH YL+S++ LD LL R++L TK+S+ND +IKA
Sbjct: 285 KTIAKRLTESKSTIPHYYLTSEIQLDTLLQVREKLNGLLAKGTSGQATKISINDFIIKAS 344
Query: 472 AVALKNVPEANAYWDVEKGEIVLCDAIDISIAVATEKGLMTPIVRNADQKSISAISMEVK 531
A+A + VPEAN+YW I +D+S+AV+T GL+TPI+ NA K ++ I+ E+
Sbjct: 345 ALACQRVPEANSYW--MDSFIRENHHVDVSVAVSTPAGLITPIIFNAHAKGLATIASEIV 402
Query: 532 ELAEKARAGKLAPHEFQGGTFSISNLGMF-PVDQFCAIINPPQAGILAVGRGNQVVEPVI 590
ELA++AR GKL PHEFQGGTF++SNLGMF V F AIINPPQ+ ILA+G + + P
Sbjct: 403 ELAQRAREGKLQPHEFQGGTFTVSNLGMFGSVSDFTAIINPPQSCILAIGGASDKLVP-- 460
Query: 591 GSDGNETPAVVTKMNLTLSADHRVFEGKVG 620
D E + M +TLS DHR +G VG
Sbjct: 461 --DEAEGYKKIKTMKVTLSCDHRTVDGAVG 488
Score = 123 bits (308), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 55/94 (58%), Positives = 72/94 (76%)
Query: 75 VRHFSSSELPSHTVVGMPALSPTMSQGNIAKWRKKEGDKIEIGDILCEIETDKATVEFES 134
VR +SS LP H V +PALSPTM G + W+KKEGD++ GD+LCEIETDKAT+ FE+
Sbjct: 66 VRLYSSGNLPKHNRVALPALSPTMELGTVVSWQKKEGDQLSEGDLLCEIETDKATMGFET 125
Query: 135 LEEGFLAKILVPEGSKDVPVGQPIAITVEDADDI 168
EEG+LAKIL+ EGSKDVP+G+ + I V++ D+
Sbjct: 126 PEEGYLAKILIQEGSKDVPIGKLLCIIVDNEADV 159
>sp|Q9ZD20|ODP2_RICPR Dihydrolipoyllysine-residue acetyltransferase component of pyruvate
dehydrogenase complex OS=Rickettsia prowazekii (strain
Madrid E) GN=pdhC PE=3 SV=1
Length = 408
Score = 284 bits (726), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 176/427 (41%), Positives = 247/427 (57%), Gaps = 51/427 (11%)
Query: 209 LPPRVVLEMPALSPTMNQGNIAKWRKNEGDKIEVGDVICEIETDKATLEFECLEEGYLAK 268
+P +++ MPALSPTM +GN+A+W K EGDK+ G+VI EIETDKAT+E E ++EG LAK
Sbjct: 1 MPIKIL--MPALSPTMREGNLARWLKKEGDKVNPGEVIAEIETDKATMEVESVDEGILAK 58
Query: 269 ILAPEGSKDVAVGQPIAITV---EDPGDVGTV---KNSVTSGAEVKGEKETHHDSKDVVK 322
I+ P+ S++V V IA+ ED D+ + NSV+ + + +DS V+
Sbjct: 59 IIIPQNSQNVPVNSLIAVLSEEGEDKADIDSFIAQNNSVSLSLKTDATLKKSNDSITNVE 118
Query: 323 VQKGSFTKI--SPSAKLLILEHGLDASSLQASGPYGTLLKGDVLAAIKSGKVSSRISSHT 380
K KI SP AK L + ++Q SGP+G ++K D+L S+
Sbjct: 119 GIKHDSNKIFASPLAKRLAKIGDIRLENVQGSGPHGRIVKQDIL-------------SYD 165
Query: 381 EKTSPSPLPQTSTAVSPGSKSDLELSDSFEDFPNTQIRKVIARRLLESKQNTPHLYLSSD 440
TS + + T + + PN IRK+IA+RLLESKQ PH YLS +
Sbjct: 166 SSTSSNKIVYRDT-------------EEYRSVPNNNIRKIIAKRLLESKQTVPHFYLSIE 212
Query: 441 VVLDPLLSFR----KELKEKHNTKVSVNDIVIKAVAVALKNVPEANAYWDVEKGEIVLCD 496
+D LL R K E TK+SVND +I AVA AL+ VP ANA W + I +
Sbjct: 213 CNVDKLLDVREDINKSFSEDKVTKISVNDFIILAVAKALQEVPNANASW--SEDAIRYYN 270
Query: 497 AIDISIAVATEKGLMTPIVRNADQKSISAISMEVKELAEKARAGKLAPHEFQGGTFSISN 556
+DIS+AVA E G++TPIV++A++K+I +S E+K L +KA+ KL P EFQGG F+ISN
Sbjct: 271 NVDISVAVAIENGIVTPIVKDANKKNIIELSREMKTLIKKAKDNKLTPIEFQGGGFTISN 330
Query: 557 LGMFPVDQFCAIINPPQAGILAVGRGNQ--VVEPVIGSDGNETPAVVTKMNLTLSADHRV 614
LGM+ + F AIIN PQ+ I+ VG + +V+ N+ + T M++TLSADHRV
Sbjct: 331 LGMYGIKNFNAIINTPQSCIMGVGASTKRAIVK-------NDQIIIATIMDVTLSADHRV 383
Query: 615 FEGKVGG 621
+G V
Sbjct: 384 IDGAVSA 390
Score = 105 bits (262), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 48/86 (55%), Positives = 67/86 (77%)
Query: 91 MPALSPTMSQGNIAKWRKKEGDKIEIGDILCEIETDKATVEFESLEEGFLAKILVPEGSK 150
MPALSPTM +GN+A+W KKEGDK+ G+++ EIETDKAT+E ES++EG LAKI++P+ S+
Sbjct: 7 MPALSPTMREGNLARWLKKEGDKVNPGEVIAEIETDKATMEVESVDEGILAKIIIPQNSQ 66
Query: 151 DVPVGQPIAITVEDADDIQHIPATIA 176
+VPV IA+ E+ +D I + IA
Sbjct: 67 NVPVNSLIAVLSEEGEDKADIDSFIA 92
>sp|Q68WK6|ODP2_RICTY Dihydrolipoyllysine-residue acetyltransferase component of pyruvate
dehydrogenase complex OS=Rickettsia typhi (strain ATCC
VR-144 / Wilmington) GN=pdhC PE=3 SV=1
Length = 404
Score = 281 bits (719), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 175/427 (40%), Positives = 247/427 (57%), Gaps = 55/427 (12%)
Query: 209 LPPRVVLEMPALSPTMNQGNIAKWRKNEGDKIEVGDVICEIETDKATLEFECLEEGYLAK 268
+P +++ MPALSPTM GN+A+W K EGDK+ G+VI EIETDKAT+E E ++EG LAK
Sbjct: 1 MPIKIL--MPALSPTMKDGNLARWLKKEGDKVNPGEVIAEIETDKATMEVESVDEGILAK 58
Query: 269 ILAPEGSKDVAVGQPIAITVEDPGDVGTV------KNSVTSGAEVKGEKETHHDSKDVVK 322
I+ P+ S++V V IA+ E+ + NSV+ + + ++S V+
Sbjct: 59 IIIPQNSQNVPVNSLIAVLSEEGESTADIDAFIAKNNSVSLSLKTDTTLKKANESITNVE 118
Query: 323 VQKGSFTKI--SPSAKLLILEHGLDASSLQASGPYGTLLKGDVLAAIKSGKVSSRISSHT 380
V K +KI SP AK L + S+Q SGP+G ++K D+L
Sbjct: 119 VVKHDLSKIFASPLAKRLAKIRNIRLESVQGSGPHGRIVKQDIL---------------- 162
Query: 381 EKTSPSPLPQTSTAVSPGSKSDLELSDSFEDFPNTQIRKVIARRLLESKQNTPHLYLSSD 440
S SP STA + + + + PN IR++IA+RLLESKQ PH YLS +
Sbjct: 163 ---SYSP----STAYNRDT-------EEYRSVPNNNIRQIIAKRLLESKQTVPHFYLSIE 208
Query: 441 VVLDPLLSFR----KELKEKHNTKVSVNDIVIKAVAVALKNVPEANAYWDVEKGEIVLCD 496
+D LL R K E TK+SVND +I AVA AL+ VP ANA W + I +
Sbjct: 209 CNVDKLLDIREDINKSFSEDKLTKISVNDFIILAVAKALQEVPNANASW--AEDAIRYYN 266
Query: 497 AIDISIAVATEKGLMTPIVRNADQKSISAISMEVKELAEKARAGKLAPHEFQGGTFSISN 556
+DIS+AVA E G++TPI+++A++K+I +S E+K L +KA+ KL P EFQGG F+ISN
Sbjct: 267 NVDISVAVAIENGIVTPIIKDANKKNIIELSHEMKILIKKAKDNKLTPVEFQGGGFTISN 326
Query: 557 LGMFPVDQFCAIINPPQAGILAVGRGNQ--VVEPVIGSDGNETPAVVTKMNLTLSADHRV 614
LGM+ + F AIIN PQ+ I+ VG + +V+ N+ + T M++TLSADHRV
Sbjct: 327 LGMYGIKNFNAIINTPQSCIMGVGASTKRAIVK-------NDQIIIATIMDVTLSADHRV 379
Query: 615 FEGKVGG 621
+G V
Sbjct: 380 IDGAVSA 386
Score = 104 bits (259), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 51/103 (49%), Positives = 69/103 (66%)
Query: 91 MPALSPTMSQGNIAKWRKKEGDKIEIGDILCEIETDKATVEFESLEEGFLAKILVPEGSK 150
MPALSPTM GN+A+W KKEGDK+ G+++ EIETDKAT+E ES++EG LAKI++P+ S+
Sbjct: 7 MPALSPTMKDGNLARWLKKEGDKVNPGEVIAEIETDKATMEVESVDEGILAKIIIPQNSQ 66
Query: 151 DVPVGQPIAITVEDADDIQHIPATIAGGAEAKEQSSTHQDVKK 193
+VPV IA+ E+ + I A IA T +KK
Sbjct: 67 NVPVNSLIAVLSEEGESTADIDAFIAKNNSVSLSLKTDTTLKK 109
>sp|Q8BKZ9|ODPX_MOUSE Pyruvate dehydrogenase protein X component, mitochondrial OS=Mus
musculus GN=Pdhx PE=2 SV=1
Length = 501
Score = 279 bits (713), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 174/429 (40%), Positives = 252/429 (58%), Gaps = 31/429 (7%)
Query: 217 MPALSPTMNQGNIAKWRKNEGDKIEVGDVICEIETDKATLEFECLEEGYLAKILAPEGSK 276
MP+LSPTM QGNI KW + EG+ + GD +CEIETDKA + + ++G LAKI+ EG+K
Sbjct: 61 MPSLSPTMEQGNIVKWLRKEGEAVSAGDSLCEIETDKAVVTLDANDDGILAKIVVEEGAK 120
Query: 277 DVAVGQPIAITVEDPGDVGTV---KNSVTSGAEVKGEKETHHDSKDVV-----KVQKGSF 328
++ +G IA+ VE+ D V K+ K T + + K KG+
Sbjct: 121 NIQLGSLIALMVEEGEDWKQVEIPKDVSAPPPVSKPPAPTQPSPQPQIPCPARKEHKGTA 180
Query: 329 T-KISPSAKLLILEHGLDASSLQASGPYGTLLKGDVLAAI---KSGKVS-SRISSHTEKT 383
++SP+A+ ++ +H LDAS A+GP G K D L + + GK++ SR +S +
Sbjct: 181 RFRLSPAARNILEKHSLDASQGTATGPRGIFTKEDALKLVELKQMGKITESRPASAPPPS 240
Query: 384 -----------SPS-PLPQTSTAVSPGSKSDLELSDSFEDFPNTQIRKVIARRLLESKQN 431
PS P P T PG + + +F + P + IR+VIA+RL ESK
Sbjct: 241 LSASVPPQATAGPSYPRPMTPPVSIPGQPN---AAGTFTEIPASNIRRVIAKRLTESKST 297
Query: 432 TPHLYLSSDVVLDPLLSFRKELKEKHNTKVSVNDIVIKAVAVALKNVPEANAYWDVEKGE 491
PH Y ++D L +L R++L K + KVSVND +I+A AV LK +P N WD E +
Sbjct: 298 VPHAYATADCDLGAVLKVRRDLV-KDDIKVSVNDFIIRAAAVTLKQMPGVNVTWDGEGPK 356
Query: 492 IVLCDAIDISIAVATEKGLMTPIVRNADQKSISAISMEVKELAEKARAGKLAPHEFQGGT 551
+ ++DIS+AVAT+KGL+TPI+++A K I I+ VK L++KAR GKL P E+QGG+
Sbjct: 357 QL--PSVDISVAVATDKGLITPIIKDAAAKGIQEIADSVKVLSKKARDGKLMPEEYQGGS 414
Query: 552 FSISNLGMFPVDQFCAIINPPQAGILAVGRGNQVVEPVIGSDGNETPAVVTKMNLTLSAD 611
FSISNLGMF +D+F A+INPPQA ILAVGR V++ +GN + +T+S+D
Sbjct: 415 FSISNLGMFGIDEFAAVINPPQACILAVGRFRPVLKLTEDEEGNPQLQQHQLITVTMSSD 474
Query: 612 HRVFEGKVG 620
RV + ++
Sbjct: 475 SRVVDDELA 483
Score = 97.4 bits (241), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 48/98 (48%), Positives = 68/98 (69%), Gaps = 2/98 (2%)
Query: 76 RHFSSSEL--PSHTVVGMPALSPTMSQGNIAKWRKKEGDKIEIGDILCEIETDKATVEFE 133
R F S++L V MP+LSPTM QGNI KW +KEG+ + GD LCEIETDKA V +
Sbjct: 44 RWFHSTQLLQADPIKVLMPSLSPTMEQGNIVKWLRKEGEAVSAGDSLCEIETDKAVVTLD 103
Query: 134 SLEEGFLAKILVPEGSKDVPVGQPIAITVEDADDIQHI 171
+ ++G LAKI+V EG+K++ +G IA+ VE+ +D + +
Sbjct: 104 ANDDGILAKIVVEEGAKNIQLGSLIALMVEEGEDWKQV 141
>sp|P12695|ODP2_YEAST Dihydrolipoyllysine-residue acetyltransferase component of pyruvate
dehydrogenase complex, mitochondrial OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=LAT1 PE=1
SV=1
Length = 482
Score = 277 bits (709), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 178/444 (40%), Positives = 251/444 (56%), Gaps = 37/444 (8%)
Query: 207 SELPPRVVLEMPALSPTMNQGNIAKWRKNEGDKIEVGDVICEIETDKATLEFECLEEGYL 266
+ P ++ MPALSPTM QGN+A W K EGD++ G+VI EIETDKA ++FE E+GYL
Sbjct: 29 ASYPEHTIIGMPALSPTMTQGNLAAWTKKEGDQLSPGEVIAEIETDKAQMDFEFQEDGYL 88
Query: 267 AKILAPEGSKDVAVGQPIAITVEDPGDVGTVKN---------SVTSG----AEVKGEKET 313
AKIL PEG+KD+ V +PIA+ VED DV K+ S TS AE + EK+
Sbjct: 89 AKILVPEGTKDIPVNKPIAVYVEDKADVPAFKDFKLEDSGSDSKTSTKAQPAEPQAEKKQ 148
Query: 314 HHDSK------------DVVKVQKGSFTKISPSAKLLILEHGLDASSLQASGPYGTLLKG 361
++ DV Q F SP AK + LE G+ + +GP G + K
Sbjct: 149 EAPAEETKTSAPEAKKSDVAAPQGRIFA--SPLAKTIALEKGISLKDVHGTGPRGRITKA 206
Query: 362 DVLAAIKSGKVSSRISSHTEKTSPSPLPQTSTAVSPGSKSDLELSDSFEDFPNTQIRKVI 421
D+ + ++ S +S +P+ +++ + GS + S+ED P + +R +I
Sbjct: 207 DIESYLEKSSKQSSQTSGAAAATPA---AATSSTTAGSAPSPSSTASYEDVPISTMRSII 263
Query: 422 ARRLLESKQNTPHLYLSSDVVLDPLLSFRKELKEKHN--TKVSVNDIVIKAVAVALKNVP 479
RLL+S Q P +SS + + LL R+ L N K+S+ND+++KA+ VA K VP
Sbjct: 264 GERLLQSTQGIPSYIVSSKISISKLLKLRQSLNATANDKYKLSINDLLVKAITVAAKRVP 323
Query: 480 EANAYWDVEKGEIVLCDAIDISIAVATEKGLMTPIVRNADQKSISAISMEVKELAEKARA 539
+ANAYW + I +D+S+AVAT GL+TPIV+N + K +S IS E+KEL ++AR
Sbjct: 324 DANAYWLPNENVIRKFKNVDVSVAVATPTGLLTPIVKNCEAKGLSQISNEIKELVKRARI 383
Query: 540 GKLAPHEFQGGTFSISNLGM-FPVDQFCAIINPPQAGILAVGRGNQV-VEPVIGSDGNET 597
KLAP EFQGGT ISN+GM V+ F +IINPPQ+ ILA+ +V VE +G
Sbjct: 384 NKLAPEEFQGGTICISNMGMNNAVNMFTSIINPPQSTILAIATVERVAVEDAAAENGFSF 443
Query: 598 PAVVTKMNLTLSADHRVFEGKVGG 621
VT +T + DHR +G G
Sbjct: 444 DNQVT---ITGTFDHRTIDGAKGA 464
Score = 131 bits (329), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 58/106 (54%), Positives = 82/106 (77%), Gaps = 2/106 (1%)
Query: 63 HDSPLKLKMQIGVRHFSSSELPSHTVVGMPALSPTMSQGNIAKWRKKEGDKIEIGDILCE 122
S L +++ +R ++S P HT++GMPALSPTM+QGN+A W KKEGD++ G+++ E
Sbjct: 13 RSSVLTRSLRLQLRCYAS--YPEHTIIGMPALSPTMTQGNLAAWTKKEGDQLSPGEVIAE 70
Query: 123 IETDKATVEFESLEEGFLAKILVPEGSKDVPVGQPIAITVEDADDI 168
IETDKA ++FE E+G+LAKILVPEG+KD+PV +PIA+ VED D+
Sbjct: 71 IETDKAQMDFEFQEDGYLAKILVPEGTKDIPVNKPIAVYVEDKADV 116
>sp|O00330|ODPX_HUMAN Pyruvate dehydrogenase protein X component, mitochondrial OS=Homo
sapiens GN=PDHX PE=1 SV=3
Length = 501
Score = 277 bits (708), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 170/428 (39%), Positives = 246/428 (57%), Gaps = 37/428 (8%)
Query: 217 MPALSPTMNQGNIAKWRKNEGDKIEVGDVICEIETDKATLEFECLEEGYLAKILAPEGSK 276
MP+LSPTM +GNI KW K EG+ + GD +CEIETDKA + + ++G LAKI+ EGSK
Sbjct: 61 MPSLSPTMEEGNIVKWLKKEGEAVSAGDALCEIETDKAVVTLDASDDGILAKIVVEEGSK 120
Query: 277 DVAVGQPIAITVEDPGDVGTVKNSVTSGAEVKGEKETHHDSKDVVKVQ--------KGSF 328
++ +G I + VE+ D V+ G K + ++ G+
Sbjct: 121 NIRLGSLIGLIVEEGEDWKHVEIPKDVGPPPPVSKPSEPRPSPEPQISIPVKKEHIPGTL 180
Query: 329 T-KISPSAKLLILEHGLDASSLQASGPYGTLLKGDVLAAIK---SGKVS----------- 373
++SP+A+ ++ +H LDAS A+GP G K D L ++ +GK++
Sbjct: 181 RFRLSPAARNILEKHSLDASQGTATGPRGIFTKEDALKLVQLKQTGKITESRPTPAPTAT 240
Query: 374 ----SRISSHTEKTSPSP-LPQTSTAVSPGSKSDLELSDSFEDFPNTQIRKVIARRLLES 428
S + + + P P +P ST P + +F + P + IR+VIA+RL ES
Sbjct: 241 PTAPSPLQATAGPSYPRPVIPPVSTPGQPNAVG------TFTEIPASNIRRVIAKRLTES 294
Query: 429 KQNTPHLYLSSDVVLDPLLSFRKELKEKHNTKVSVNDIVIKAVAVALKNVPEANAYWDVE 488
K PH Y ++D L +L R++L K + KVSVND +IKA AV LK +P+ N WD E
Sbjct: 295 KSTVPHAYATADCDLGAVLKVRQDLV-KDDIKVSVNDFIIKAAAVTLKQMPDVNVSWDGE 353
Query: 489 KGEIVLCDAIDISIAVATEKGLMTPIVRNADQKSISAISMEVKELAEKARAGKLAPHEFQ 548
+ + IDIS+AVAT+KGL+TPI+++A K I I+ VK L++KAR GKL P E+Q
Sbjct: 354 GPKQL--PFIDISVAVATDKGLLTPIIKDAAAKGIQEIADSVKALSKKARDGKLLPEEYQ 411
Query: 549 GGTFSISNLGMFPVDQFCAIINPPQAGILAVGRGNQVVEPVIGSDGNETPAVVTKMNLTL 608
GG+FSISNLGMF +D+F A+INPPQA ILAVGR V++ +GN + +T+
Sbjct: 412 GGSFSISNLGMFGIDEFTAVINPPQACILAVGRFRPVLKLTEDEEGNAKLQQRQLITVTM 471
Query: 609 SADHRVFE 616
S+D RV +
Sbjct: 472 SSDSRVVD 479
Score = 98.2 bits (243), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 44/81 (54%), Positives = 61/81 (75%)
Query: 91 MPALSPTMSQGNIAKWRKKEGDKIEIGDILCEIETDKATVEFESLEEGFLAKILVPEGSK 150
MP+LSPTM +GNI KW KKEG+ + GD LCEIETDKA V ++ ++G LAKI+V EGSK
Sbjct: 61 MPSLSPTMEEGNIVKWLKKEGEAVSAGDALCEIETDKAVVTLDASDDGILAKIVVEEGSK 120
Query: 151 DVPVGQPIAITVEDADDIQHI 171
++ +G I + VE+ +D +H+
Sbjct: 121 NIRLGSLIGLIVEEGEDWKHV 141
>sp|P22439|ODPX_BOVIN Pyruvate dehydrogenase protein X component OS=Bos taurus GN=PDHX
PE=1 SV=3
Length = 501
Score = 275 bits (704), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 169/432 (39%), Positives = 251/432 (58%), Gaps = 45/432 (10%)
Query: 217 MPALSPTMNQGNIAKWRKNEGDKIEVGDVICEIETDKATLEFECLEEGYLAKILAPEGSK 276
MP+LSPTM +GNI KW K EG+ + GD +CEIETDKA + + ++G LAKI+ EGSK
Sbjct: 61 MPSLSPTMEEGNIVKWLKKEGEAVSAGDALCEIETDKAVVTLDASDDGILAKIVVAEGSK 120
Query: 277 DVAVGQPIAITVED---------PGDVG----TVKNSV---TSGAEVKGEKETHHDSKDV 320
++ +G I + VE+ P D G K SV ++ ++ + H
Sbjct: 121 NIRLGSLIGLLVEEGEDWKHVEIPKDTGPPPPAAKPSVPPPSAEPQIATPVKKEHPPG-- 178
Query: 321 VKVQKGSFTKISPSAKLLILEHGLDASSLQASGPYGTLLKGDVLAAIK---SGKVS---- 373
KVQ ++SP+A+ ++ +H LDA+ A+GP G K D L ++ +GK++
Sbjct: 179 -KVQ----FRLSPAARNILEKHALDANQGTATGPRGIFTKEDALKLVQLKQTGKITEPRP 233
Query: 374 ---------SRISSHTEKTSPSPLPQTSTAVSPGSKSDLELSDSFEDFPNTQIRKVIARR 424
+ + T+ P P +PG + + +F + P + IR+VIA+R
Sbjct: 234 TAALPTTPAAPLPPQAAATASYPRPMIPPVSTPGQPN---VEGTFTEIPASNIRRVIAKR 290
Query: 425 LLESKQNTPHLYLSSDVVLDPLLSFRKELKEKHNTKVSVNDIVIKAVAVALKNVPEANAY 484
L ESK PH Y ++D L +L+ R+ L + + KVSVND +IKA AV LK +P NA
Sbjct: 291 LTESKSTIPHAYATTDCDLGAVLTARQNLV-RDDIKVSVNDFIIKAAAVTLKQMPNVNAS 349
Query: 485 WDVEKGEIVLCDAIDISIAVATEKGLMTPIVRNADQKSISAISMEVKELAEKARAGKLAP 544
WD E + + +IDIS+AVAT++GL+TP++++A K + I+ VK L++KAR GKL P
Sbjct: 350 WDGEGAKQL--PSIDISVAVATDRGLITPVIKDAAAKGLQEIADSVKALSKKARDGKLLP 407
Query: 545 HEFQGGTFSISNLGMFPVDQFCAIINPPQAGILAVGRGNQVVEPVIGSDGNETPAVVTKM 604
E+QGG+FSISNLGMF +D+F A+INPPQA ILAVGR V++ +GN +
Sbjct: 408 EEYQGGSFSISNLGMFGIDEFTAVINPPQACILAVGRFRPVLKLTQDEEGNAQLQQRQLI 467
Query: 605 NLTLSADHRVFE 616
+T+S+D RV +
Sbjct: 468 TVTMSSDSRVVD 479
Score = 98.2 bits (243), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 44/81 (54%), Positives = 61/81 (75%)
Query: 91 MPALSPTMSQGNIAKWRKKEGDKIEIGDILCEIETDKATVEFESLEEGFLAKILVPEGSK 150
MP+LSPTM +GNI KW KKEG+ + GD LCEIETDKA V ++ ++G LAKI+V EGSK
Sbjct: 61 MPSLSPTMEEGNIVKWLKKEGEAVSAGDALCEIETDKAVVTLDASDDGILAKIVVAEGSK 120
Query: 151 DVPVGQPIAITVEDADDIQHI 171
++ +G I + VE+ +D +H+
Sbjct: 121 NIRLGSLIGLLVEEGEDWKHV 141
>sp|P20285|ODP2_NEUCR Dihydrolipoyllysine-residue acetyltransferase component of pyruvate
dehydrogenase complex, mitochondrial OS=Neurospora
crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 /
DSM 1257 / FGSC 987) GN=mrp-3 PE=1 SV=2
Length = 458
Score = 270 bits (690), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 181/463 (39%), Positives = 247/463 (53%), Gaps = 66/463 (14%)
Query: 193 KEAVQETSASRINTSEL-------PPRVVLEMPALSPTMNQGNIAKWRKNEGDKIEVGDV 245
++A++ S +R+ L PP V++MPALSPTM G I W+K GDKIE G+V
Sbjct: 8 RQALRHASVARVALPSLTRWYASYPPHTVVKMPALSPTMTSGGIGAWQKKPGDKIEPGEV 67
Query: 246 ICEIETDKATLEFECLEEGYLAKILAPEGSKDVAVGQPIAITVEDPGDVGTVKNSV---- 301
+ EIETDKA ++FE EEG LAKIL G KDVAVG PIAI VE+ DV K+
Sbjct: 68 LVEIETDKAQMDFEFQEEGVLAKILKDSGEKDVAVGNPIAILVEEGTDVNAFKDFTLKDA 127
Query: 302 ---TSGAEVKGEKETH-------HDSKDVVKVQKGSFT-----------KISPSAKLLIL 340
TS A K E + + + SFT P+AK L
Sbjct: 128 GGETSPAVPKDEPKNESTASAPTPAPTPAPEPENTSFTGRFQTALEREPNALPAAKRLAR 187
Query: 341 EHGLDASSLQASGPYGTLLKGDVLAAIKSGKVSSRISSHTEKTSPSPLPQTSTAVSPGSK 400
E G+D +++ SGP G + + DV A+ S + ++
Sbjct: 188 EKGIDLRNVKGSGPGGKITEEDVKKALASAPAAGAAAA---------------------- 225
Query: 401 SDLELSDSFEDFPNTQIRKVIARRLLESKQNTPHLYLSSDVVLDPLLSFRKELKEKHN-- 458
++ D P + +RK IA RL ES PH ++S+++ + LL R+ L +
Sbjct: 226 -------AYTDVPISGMRKTIAARLKESVTENPHFFVSTNLSVSKLLKLRQALNSSADGR 278
Query: 459 TKVSVNDIVIKAVAVALKNVPEANAYWDVEKGEIVLCDAIDISIAVATEKGLMTPIVRNA 518
K+SVND +IKA+ +A K VP N+ W G I + +D+S+AVAT GL+TPIV+
Sbjct: 279 YKLSVNDFLIKAMGIASKRVPTVNSSW--RDGVIRQFETVDVSVAVATPNGLITPIVKGV 336
Query: 519 DQKSISAISMEVKELAEKARAGKLAPHEFQGGTFSISNLGMFP-VDQFCAIINPPQAGIL 577
+ K + +IS VKELA+KAR GKL P E+QGG+ SISN+GM P V F AIINPPQA IL
Sbjct: 337 EGKGLESISAAVKELAKKARDGKLKPEEYQGGSISISNMGMNPAVQSFTAIINPPQAAIL 396
Query: 578 AVGRGNQVVEPVIGSDGNETPAVVTKMNLTLSADHRVFEGKVG 620
AVG +V PV DG + ++ +T S DH+V +G VG
Sbjct: 397 AVGAPQKVAVPVENEDGTTGVSWDEQIIVTASFDHKVVDGAVG 439
Score = 113 bits (283), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 59/107 (55%), Positives = 72/107 (67%), Gaps = 2/107 (1%)
Query: 63 HDSPLKLKMQIGVRHFSSSELPSHTVVGMPALSPTMSQGNIAKWRKKEGDKIEIGDILCE 122
H S ++ + R ++S P HTVV MPALSPTM+ G I W+KK GDKIE G++L E
Sbjct: 13 HASVARVALPSLTRWYAS--YPPHTVVKMPALSPTMTSGGIGAWQKKPGDKIEPGEVLVE 70
Query: 123 IETDKATVEFESLEEGFLAKILVPEGSKDVPVGQPIAITVEDADDIQ 169
IETDKA ++FE EEG LAKIL G KDV VG PIAI VE+ D+
Sbjct: 71 IETDKAQMDFEFQEEGVLAKILKDSGEKDVAVGNPIAILVEEGTDVN 117
>sp|Q9R9N3|ODP2_RHIME Dihydrolipoyllysine-residue acetyltransferase component of pyruvate
dehydrogenase complex OS=Rhizobium meliloti (strain
1021) GN=pdhC PE=3 SV=1
Length = 447
Score = 261 bits (668), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 166/435 (38%), Positives = 239/435 (54%), Gaps = 40/435 (9%)
Query: 215 LEMPALSPTMNQGNIAKWRKNEGDKIEVGDVICEIETDKATLEFECLEEGYLAKILAPEG 274
+ MPALSPTM +GN+AKW EGDK++ GDVI EIETDKAT+E E ++EG +AKI+ P G
Sbjct: 5 ITMPALSPTMEEGNLAKWLVKEGDKVKSGDVIAEIETDKATMEVEAVDEGTVAKIVVPAG 64
Query: 275 SKDVAVGQPIAITVEDPGDVG--------------------TVKNSVTSGAEVKGEKETH 314
++ V V IA+ + DV T + + +
Sbjct: 65 TEGVKVNALIAVLAAEGEDVATAAKGGNGAAGAVPAPKPKETAETAPAAAPAPAAAPAPQ 124
Query: 315 HDSKDVVKVQKGSFTKI--SPSAKLLILEHGLDASSLQASGPYGTLLKGDVLAAIKSGKV 372
+ G +I SP A+ L E G+D S++ SGP+G ++K DV A+ G
Sbjct: 125 AAAPASPAPADGEGKRIFSSPLARRLAKEAGIDLSAIAGSGPHGRVVKKDVETAVSGGAA 184
Query: 373 SSRISSHTEKTSPSPLPQTSTAVSPGSKSDLELSDSFEDFPNTQIRKVIARRLLESKQNT 432
+ + + +S + L S+E P+ +RK IA+RL+ESKQ
Sbjct: 185 KPAGAPAAAPAPAT----LAKGMSEDAVLKLFEPGSYELVPHDGMRKTIAKRLVESKQTI 240
Query: 433 PHLYLSSDVVLDPLLSFRKELKE-------KHNTKVSVNDIVIKAVAVALKNVPEANAYW 485
PH Y+S D LD L++ R +L K K+SVND+VIKA+A+AL++VP+AN W
Sbjct: 241 PHFYVSVDCELDALMALRAQLNAAAPEKDGKPVYKLSVNDMVIKALALALRDVPDANVSW 300
Query: 486 DVEKGEIVLCDAIDISIAVATEKGLMTPIVRNADQKSISAISMEVKELAEKARAGKLAPH 545
+ +V D+ +AV+ GL+TPIVR A+ KS+SAIS E+K+L ++A+ KL P
Sbjct: 301 TDQN--MVKHKHADVGVAVSIPGGLITPIVRQAELKSLSAISNEMKDLGKRAKERKLKPE 358
Query: 546 EFQGGTFSISNLGMFPVDQFCAIINPPQAGILAVGRGNQVVEPVIGSDGNETPAVVTKMN 605
E+QGGT ++SN+GM V F A++NPP A ILAVG G V V+ N+ + M
Sbjct: 359 EYQGGTTAVSNMGMMGVKDFAAVVNPPHATILAVGAGEDRV--VV---RNKEMVIANVMT 413
Query: 606 LTLSADHRVFEGKVG 620
+TLS DHR +G +G
Sbjct: 414 VTLSTDHRCVDGALG 428
Score = 95.1 bits (235), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 43/80 (53%), Positives = 62/80 (77%)
Query: 89 VGMPALSPTMSQGNIAKWRKKEGDKIEIGDILCEIETDKATVEFESLEEGFLAKILVPEG 148
+ MPALSPTM +GN+AKW KEGDK++ GD++ EIETDKAT+E E+++EG +AKI+VP G
Sbjct: 5 ITMPALSPTMEEGNLAKWLVKEGDKVKSGDVIAEIETDKATMEVEAVDEGTVAKIVVPAG 64
Query: 149 SKDVPVGQPIAITVEDADDI 168
++ V V IA+ + +D+
Sbjct: 65 TEGVKVNALIAVLAAEGEDV 84
>sp|Q86AD5|Y1564_DICDI Pyruvate dehydrogenase complex subunit homolog DDB_G0271564,
mitochondrial OS=Dictyostelium discoideum GN=pdhX PE=3
SV=1
Length = 413
Score = 224 bits (571), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 137/366 (37%), Positives = 195/366 (53%), Gaps = 79/366 (21%)
Query: 333 PSAKLLILEHGLDASS-LQASGPYGTLLKGDVLAAIKSGKVS--SRIS------------ 377
PS + L++E+G+++S + A+GP LLKGDVLA IK+ +S R+S
Sbjct: 32 PSVRRLLVEYGINSSKEVTATGPQNRLLKGDVLAYIKTKNLSPVDRLSLIASSVKSSQPS 91
Query: 378 ------SHTEKTSPSPLPQTSTAVSPGSKSDLELSDSFEDFPNTQIRKVIARRLLESKQN 431
T S + V+ + + +ED PN IR+VIA +L +SKQ
Sbjct: 92 SSSSPSIVDSPTLTSQIKDQIKIVTTITNDKNKSKVIYEDIPNNNIRRVIATKLSQSKQQ 151
Query: 432 TPHLYLSSDVVLDPLLSFRKELKEKHNTKVSVNDIVIKAVAVALKNVPEANAYWDVEKGE 491
PH Y++ + LD +L+ RK + E N K+SVND V++A A+AL++ P+AN+ W E GE
Sbjct: 152 VPHFYMTVECELDNVLAMRKSMPE--NVKISVNDFVLRACALALRDNPQANSKWSDEHGE 209
Query: 492 IVLCDAIDISIAVATEKGLMTPIVRNADQKSISAISMEVKELAEKARAGKLAPHEFQGGT 551
+L +DIS AV+T++GL+TPI+ N D+K + AIS E K+LA KAR GKL P EF GGT
Sbjct: 210 AILNPTVDISFAVSTDRGLITPIITNTDKKQLLAISNESKQLALKARDGKLKPEEFIGGT 269
Query: 552 FSISNLGMFPVDQFCAIINPPQAGILAVGRGNQVVEP----------------------V 589
FS+SNLGMF + F AIIN PQAGILA+G G +V+ P +
Sbjct: 270 FSVSNLGMFGITSFNAIINYPQAGILAIGTGRKVLRPPSTYQPIETNLNASYGSEGKSEI 329
Query: 590 IGSDG----------------------------------NETPAVVTKMNLTLSADHRVF 615
I ++G E P V M++TLS D+RVF
Sbjct: 330 INTNGPLTTEQLEKLFDNTVSKKQDIKQQIINEQPQPPKYEQPKVANVMDVTLSGDNRVF 389
Query: 616 EGKVGG 621
+ ++ G
Sbjct: 390 DDEIAG 395
>sp|P45302|ODO2_HAEIN Dihydrolipoyllysine-residue succinyltransferase component of
2-oxoglutarate dehydrogenase complex OS=Haemophilus
influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
GN=sucB PE=3 SV=1
Length = 409
Score = 186 bits (472), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 137/410 (33%), Positives = 214/410 (52%), Gaps = 38/410 (9%)
Query: 217 MPALSPTMNQGNIAKWRKNEGDKIEVGDVICEIETDKATLEFECLEEGYLAKILAPEGSK 276
+P L ++ +A W K GD ++ +VI EIETDK LE L +G LA+++ EG
Sbjct: 7 VPDLPESVADATVATWHKKLGDTVKRDEVIVEIETDKVVLEVPALSDGVLAEVVQAEGET 66
Query: 277 DVAVGQPIAITVEDPGDVGTVKNSVTSGAEVKGEKE-THHDSKDV-VKVQKGSFTKISPS 334
V+ I+ GDV S A +K E T D ++ ++ SP
Sbjct: 67 VVSKQLLGKISTAQEGDV--------SSATLKATNEPTPSDRQNAAIENSHNHNADQSPV 118
Query: 335 AKLLILEHGLDASSLQASGPYGTLLKGDVLAAIKSGKVSSRISSHTEKTSPSPLPQTSTA 394
+ L+ EH L A +Q SG G L + D+ +++ R + ++ + + ST
Sbjct: 119 IRRLLAEHDLQADQIQGSGVGGRLTREDI-----EREIAKRQAQQVKQEAATEQNTIST- 172
Query: 395 VSPGSKSDLELSDSFEDFPNTQIRKVIARRLLESKQNTPHLYLSSDVVLDPLLSFRKELK 454
V+ ++S+ + P T++RK IA RLLE+K +T L ++V + P+++ RK
Sbjct: 173 VAYSARSE-------KRVPMTRLRKRIAERLLEAKNSTAMLTTFNEVDMQPIMTLRKTYG 225
Query: 455 EK----HNTKVSVNDIVIKAVAVALKNVPEANAYWDVEKGEIVLCDAIDISIAVATEKGL 510
EK H+ ++ IKAV ALK PE NA D + ++V + DISIAV+T +GL
Sbjct: 226 EKFEKQHSVRLGFMSFYIKAVVEALKRYPEVNASIDGD--DVVYHNYFDISIAVSTPRGL 283
Query: 511 MTPIVRNADQKSISAISMEVKELAEKARAGKLAPHEFQGGTFSISNLGMFPVDQFCAIIN 570
+TP++R+ D+ S++ I ++K LAEK R GKL + GG F+I+N G+F IIN
Sbjct: 284 VTPVLRDCDKLSMAEIEKQIKALAEKGRDGKLTVEDLTGGNFTITNGGVFGSLMSTPIIN 343
Query: 571 PPQAGILAVGRGNQVVEPVIGSDGNETPAVVTK--MNLTLSADHRVFEGK 618
PPQ+ IL + + + E I +G VV + M L LS DHR+ +G+
Sbjct: 344 PPQSAILGM---HAIKERPIALNGQ----VVIRPMMYLALSYDHRLIDGR 386
Score = 48.5 bits (114), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 37/58 (63%)
Query: 91 MPALSPTMSQGNIAKWRKKEGDKIEIGDILCEIETDKATVEFESLEEGFLAKILVPEG 148
+P L +++ +A W KK GD ++ +++ EIETDK +E +L +G LA+++ EG
Sbjct: 7 VPDLPESVADATVATWHKKLGDTVKRDEVIVEIETDKVVLEVPALSDGVLAEVVQAEG 64
>sp|Q8CT13|ODP2_STAES Dihydrolipoyllysine-residue acetyltransferase component of pyruvate
dehydrogenase complex OS=Staphylococcus epidermidis
(strain ATCC 12228) GN=pdhC PE=3 SV=1
Length = 433
Score = 180 bits (456), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 135/426 (31%), Positives = 210/426 (49%), Gaps = 38/426 (8%)
Query: 215 LEMPALSPTMNQGNIAKWRKNEGDKIEVGDVICEIETDKATLEFECLEEGYLAKILAPEG 274
+P + +++G I KW GD IE DV+ E++ DK+ +E G + ++L EG
Sbjct: 5 FRLPDIGEGIHEGEIVKWFIKAGDTIEEDDVLAEVQNDKSVVEIPSPVSGTVEEVLVDEG 64
Query: 275 SKDVAVGQPIAITVEDP----------GDVGTVKNSVTSGAEVKGEKETHHDSKDVVKVQ 324
+ VAV + + ++ P GD K E+ + S++ +V
Sbjct: 65 T--VAVVGDVIVKIDAPDAEEMQFKGHGDDEDSKKEEKEQESPVQEEASSTQSQEKTEVD 122
Query: 325 KGSFTKISPSAKLLILEHGLDASSLQASGPYGTLLKGDVLAAIKSG--KVSSRISSHTEK 382
+ K PS + E+G++ ++ SG G + K D+ A + G + S S +E
Sbjct: 123 ESKTVKAMPSVRKYARENGVNIKAVNGSGKNGRITKEDIDAYLNGGSSEEGSNTSVASES 182
Query: 383 TSPSPLPQTSTAVSPGSKSDLELSDSFEDFPNTQ-----IRKVIARRLLESKQNTPHLYL 437
TS + ++T P DFP T +RK IA+ ++ SK PH+ L
Sbjct: 183 TSSDVVNASATQALPEG-----------DFPETTEKIPAMRKAIAKAMVNSKHTAPHVTL 231
Query: 438 SSDVVLDPLLSFRKELKE---KHNTKVSVNDIVIKAVAVALKNVPEANAYWDVEKGEIVL 494
++ + L RK+ KE + TK++ V+KA+ ALK P N ++ E GE+V
Sbjct: 232 MDEIDVQELWDHRKKFKEIAAEQGTKLTFLPYVVKALVSALKKYPALNTSFNEEAGEVVH 291
Query: 495 CDAIDISIAVATEKGLMTPIVRNADQKSISAISMEVKELAEKARAGKLAPHEFQGGTFSI 554
+I IA T+KGL+ P+V++AD+KSI IS E+ ELA KAR GKL E +G T +I
Sbjct: 292 KHYWNIGIAADTDKGLLVPVVKHADRKSIFEISDEINELAVKARDGKLTSEEMKGATCTI 351
Query: 555 SNLGMFPVDQFCAIINPPQAGILAVGRGNQVVEPVIGSDGNETPAVVTKMNLTLSADHRV 614
SN+G F +IN P+ IL +GR Q +P++ DG A V + L+LS DHR
Sbjct: 352 SNIGSAGGQWFTPVINHPEVAILGIGRIAQ--KPIV-KDGEIVAAPV--LALSLSFDHRQ 406
Query: 615 FEGKVG 620
+G G
Sbjct: 407 IDGATG 412
Score = 49.7 bits (117), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 44/79 (55%)
Query: 91 MPALSPTMSQGNIAKWRKKEGDKIEIGDILCEIETDKATVEFESLEEGFLAKILVPEGSK 150
+P + + +G I KW K GD IE D+L E++ DK+ VE S G + ++LV EG+
Sbjct: 7 LPDIGEGIHEGEIVKWFIKAGDTIEEDDVLAEVQNDKSVVEIPSPVSGTVEEVLVDEGTV 66
Query: 151 DVPVGQPIAITVEDADDIQ 169
V + I DA+++Q
Sbjct: 67 AVVGDVIVKIDAPDAEEMQ 85
>sp|P37942|ODB2_BACSU Lipoamide acyltransferase component of branched-chain alpha-keto
acid dehydrogenase complex OS=Bacillus subtilis (strain
168) GN=bfmBB PE=3 SV=1
Length = 424
Score = 180 bits (456), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 132/415 (31%), Positives = 213/415 (51%), Gaps = 24/415 (5%)
Query: 215 LEMPALSPTMNQGNIAKWRKNEGDKIEVGDVICEIETDKATLEFECLEEGYLAKILAPEG 274
+ MP L ++ +G I+KW GDK+ D I E+ TDK E G + +++ EG
Sbjct: 6 MTMPQLGESVTEGTISKWLVAPGDKVNKYDPIAEVMTDKVNAEVPSSFTGTITELVGEEG 65
Query: 275 SKDVAVGQPIA-ITVE--DPGDVGTVKNSVTSGAEVKGEKETHHDSKDVVKVQKGSFTKI 331
+ + VG+ I I E +P + + + + AE + +K + + +
Sbjct: 66 -QTLQVGEMICKIETEGANPAEQKQEQPAASEAAE-------NPVAKSAGAADQPNKKRY 117
Query: 332 SPSAKLLILEHGLDASSLQASGPYGTLLKGDVLAAIKSGKVSSRISSHTEKTSPSPLPQT 391
SP+ L EHG+D + +G G + + D+ I++G V + + E + +P P++
Sbjct: 118 SPAVLRLAGEHGIDLDQVTGTGAGGRITRKDIQRLIETGGVQEQ--NPEELKTAAPAPKS 175
Query: 392 STAVSPGSKSDLELSDSFE-DFPNTQIRKVIARRLLESKQNTPHLYLSSDVVLDPLLSFR 450
++ P ++ S + + + P T +RK IA + SK PH + +V + ++++R
Sbjct: 176 ASKPEPKEETSYPASAAGDKEIPVTGVRKAIASNMKRSKTEIPHAWTMMEVDVTNMVAYR 235
Query: 451 KELKEKHNTKVSVN----DIVIKAVAVALKNVPEANAYWDVEKGEIVLCDAIDISIAVAT 506
+K+ N +KAVA ALK P+ N+ W +K I+ I+ISIAVAT
Sbjct: 236 NSIKDSFKKTEGFNLTFFAFFVKAVAQALKEFPQMNSMWAGDK--IIQKKDINISIAVAT 293
Query: 507 EKGLMTPIVRNADQKSISAISMEVKELAEKARAGKLAPHEFQGGTFSISNLGMFPVDQFC 566
E L P+++NAD+K+I I+ ++ LA+K R GKL + QGGTF+++N G F Q
Sbjct: 294 EDSLFVPVIKNADEKTIKGIAKDITGLAKKVRDGKLTADDMQGGTFTVNNTGSFGSVQSM 353
Query: 567 AIINPPQAGILAVGRGNQVVEPVIGSDGNETPAVVTKMNLTLSADHRVFEGKVGG 621
IIN PQA IL V + V PV+ +G AV +NL LS DHRV +G V G
Sbjct: 354 GIINYPQAAILQV--ESIVKRPVVMDNG--MIAVRDMVNLCLSLDHRVLDGLVCG 404
Score = 39.7 bits (91), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 38/69 (55%), Gaps = 1/69 (1%)
Query: 91 MPALSPTMSQGNIAKWRKKEGDKIEIGDILCEIETDKATVEFESLEEGFLAKILVPEGSK 150
MP L ++++G I+KW GDK+ D + E+ TDK E S G + +++ EG +
Sbjct: 8 MPQLGESVTEGTISKWLVAPGDKVNKYDPIAEVMTDKVNAEVPSSFTGTITELVGEEG-Q 66
Query: 151 DVPVGQPIA 159
+ VG+ I
Sbjct: 67 TLQVGEMIC 75
>sp|Q1RHI5|ODO2_RICBR Dihydrolipoyllysine-residue succinyltransferase component of
2-oxoglutarate dehydrogenase complex OS=Rickettsia
bellii (strain RML369-C) GN=sucB PE=3 SV=1
Length = 400
Score = 178 bits (452), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 125/407 (30%), Positives = 216/407 (53%), Gaps = 41/407 (10%)
Query: 217 MPALSPTMNQGNIAKWRKNEGDKIEVGDVICEIETDKATLEFECLEEGYLAKILAPEGSK 276
+P+L ++ + IAKW K EGD ++ +++ EIET+K TLE G + KI+ +G+
Sbjct: 7 VPSLGESVTEATIAKWYKKEGDAVKTDELLLEIETEKVTLEVNSPCNGTIGKIIKADGA- 65
Query: 277 DVAVGQPIAITVEDPGDVGTVKNSVTSGAEV-KGEKETHHDSKDVVKVQKGSFTKISPSA 335
+VAVG+ I GD+ + T+ E K + + + V K + ++PS
Sbjct: 66 NVAVGEEI-------GDINEGEAVATNSNEAAKPQTASQPVPEKVPKKPAVANNTLAPSV 118
Query: 336 KLLILEHGLDASSLQASGPYGTLLKGDVLAAIKSGKVSSRISSHTEKTSPSPLPQTSTAV 395
+ L+ E+ LD ++++ +G G + KGDVL + +P+P ++T+
Sbjct: 119 QKLVTENKLDPNNIKGTGKDGRITKGDVLETM---------------NAPTPAATSTTSS 163
Query: 396 SPGSKSDLELSDSFEDFPNTQIRKVIARRLLESKQNTPHLYLSSDVVLDPLLSFR----K 451
+ S+ + E +++RK IA+RL +S+ L +++ + +++ R
Sbjct: 164 AKASE------ERVERVRMSRLRKTIAQRLKDSQNTAAILTTFNEIDMSKVIALRGKYKD 217
Query: 452 ELKEKHNTKVSVNDIVIKAVAVALKNVPEANAYWDVEKGEIVLCDAIDISIAVATEKGLM 511
E ++KH K+ ++A ALK +P NA +++ ++V + DI +AV TE+GL+
Sbjct: 218 EFEKKHGVKLGFMSFFVRATIEALKLIPSVNA--EIDGDDLVYKNYYDIGVAVGTEQGLV 275
Query: 512 TPIVRNADQKSISAISMEVKELAEKARAGKLAPHEFQGGTFSISNLGMFPVDQFCAIINP 571
P+VR+AD+ + I + LA+KAR GKL+ + GGTFSISN G++ IINP
Sbjct: 276 VPVVRDADKMGFADIEKTIGGLAKKARDGKLSMADLSGGTFSISNGGVYGSLLSTPIINP 335
Query: 572 PQAGILAVGRGNQVVEPVIGSDGNETPAVVTKMNLTLSADHRVFEGK 618
PQ+GIL + ++ E V+ DG + M + LS DHR+ +GK
Sbjct: 336 PQSGILGL---HKTEERVVAIDGK--IEIRPMMYIALSYDHRIIDGK 377
Score = 57.0 bits (136), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/153 (32%), Positives = 76/153 (49%), Gaps = 13/153 (8%)
Query: 91 MPALSPTMSQGNIAKWRKKEGDKIEIGDILCEIETDKATVEFESLEEGFLAKILVPEGSK 150
+P+L ++++ IAKW KKEGD ++ ++L EIET+K T+E S G + KI+ +G+
Sbjct: 7 VPSLGESVTEATIAKWYKKEGDAVKTDELLLEIETEKVTLEVNSPCNGTIGKIIKADGA- 65
Query: 151 DVPVGQPIAITVEDADDIQHIPATIAGGAEAKEQSSTHQDVKKEAVQETSASRINTSELP 210
+V VG+ I DI A EA + + Q V E V + A NT L
Sbjct: 66 NVAVGEEIG-------DINEGEAVATNSNEAAKPQTASQPV-PEKVPKKPAVANNT--LA 115
Query: 211 PRV--VLEMPALSPTMNQGNIAKWRKNEGDKIE 241
P V ++ L P +G R +GD +E
Sbjct: 116 PSVQKLVTENKLDPNNIKGTGKDGRITKGDVLE 148
>sp|Q92J43|ODO2_RICCN Dihydrolipoyllysine-residue succinyltransferase component of
2-oxoglutarate dehydrogenase complex OS=Rickettsia
conorii (strain ATCC VR-613 / Malish 7) GN=sucB PE=3
SV=1
Length = 395
Score = 177 bits (448), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 130/420 (30%), Positives = 220/420 (52%), Gaps = 58/420 (13%)
Query: 212 RVVLEMPALSPTMNQGNIAKWRKNEGDKIEVGDVICEIETDKATLEFECLEEGYLAKILA 271
RV + +P+L ++ + IAKW K +GD ++ +++ EIET+K TLE G + KI
Sbjct: 2 RVKIIVPSLGESITEATIAKWYKKQGDSVKTDELLLEIETEKVTLEVNAPCNGTIGKISK 61
Query: 272 PEGSKDVAVGQPIAITVEDPGDVGTVKNSVTSGAEVKGEKETHHDSKDVVKVQKGSFTK- 330
EG+ +VAVG+ I G++ ++ T+G T+++S V + + K
Sbjct: 62 TEGA-NVAVGEEI-------GEINEGASANTAG--------TNNESAKAQAVTQPTSEKP 105
Query: 331 ------ISPSAKLLILEHGLDASSLQASGPYGTLLKGDVLAAIKSGKVSSRISSHTEKTS 384
++PS + L+ E+ LD ++++ +G G + KGDVLA I +
Sbjct: 106 AVANNTLAPSVQKLVTENKLDPNNIKGTGRDGRITKGDVLATINT--------------- 150
Query: 385 PSPLPQTSTAVSPGSKSDLELSDSFEDFPNTQIRKVIARRLLESKQNTPHLYLSSDVVLD 444
T+T+ SKS+ E + +++RK IA+RL +S+ L +++ +
Sbjct: 151 ------TTTSAPAISKSNEE---RVQRVRMSRLRKTIAQRLKDSQNTAAILTTFNEIDMS 201
Query: 445 PLLSFRKELKE----KHNTKVSVNDIVIKAVAVALKNVPEANAYWDVEKGEIVLCDAIDI 500
+++ R + KE KH K+ +KA ALK +P NA +++ ++V + DI
Sbjct: 202 KVIALRNQYKEEFEKKHAVKLGFMSFFVKATIEALKLIPSVNA--EIDGDDLVYKNYYDI 259
Query: 501 SIAVATEKGLMTPIVRNADQKSISAISMEVKELAEKARAGKLAPHEFQGGTFSISNLGMF 560
+AV TE+GL+ P+VR+AD+ + + + LA++AR GKL+ + GGTFSISN G++
Sbjct: 260 GVAVGTEQGLVVPVVRDADKMGFAEVEKTIGILAKQAREGKLSMADLSGGTFSISNGGVY 319
Query: 561 PVDQFCAIINPPQAGILAVGRGNQVVEPVIGSDGNETPAVVTKMNLTLSADHRVFEGKVG 620
IINPPQ+GIL + ++ E + DG + M + LS DHR+ +GK G
Sbjct: 320 GSLLSTPIINPPQSGILGL---HKTEERAVVIDGK--IEIRPMMYIALSYDHRIIDGKEG 374
Score = 55.5 bits (132), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 81/165 (49%), Gaps = 25/165 (15%)
Query: 91 MPALSPTMSQGNIAKWRKKEGDKIEIGDILCEIETDKATVEFESLEEGFLAKILVPEGSK 150
+P+L ++++ IAKW KK+GD ++ ++L EIET+K T+E + G + KI EG+
Sbjct: 7 VPSLGESITEATIAKWYKKQGDSVKTDELLLEIETEKVTLEVNAPCNGTIGKISKTEGA- 65
Query: 151 DVPVGQPIAITVEDADDIQHIPATIAGGAEAKEQSSTHQDVKKEAVQETSASR--INTSE 208
+V VG+ I I GA A + ++ K +AV + ++ + + +
Sbjct: 66 NVAVGEEI--------------GEINEGASANTAGTNNESAKAQAVTQPTSEKPAVANNT 111
Query: 209 LPPRV--VLEMPALSPTMNQGNIAKWRKNEGDKIEVGDVICEIET 251
L P V ++ L P N K +G +I GDV+ I T
Sbjct: 112 LAPSVQKLVTENKLDP-----NNIKGTGRDG-RITKGDVLATINT 150
>sp|Q68XI8|ODO2_RICTY Dihydrolipoyllysine-residue succinyltransferase component of
2-oxoglutarate dehydrogenase complex OS=Rickettsia typhi
(strain ATCC VR-144 / Wilmington) GN=sucB PE=3 SV=1
Length = 398
Score = 176 bits (447), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 121/408 (29%), Positives = 216/408 (52%), Gaps = 41/408 (10%)
Query: 217 MPALSPTMNQGNIAKWRKNEGDKIEVGDVICEIETDKATLEFECLEEGYLAKILAPEGSK 276
+P+L ++ + IAKW K GD ++ +++ EIETDK TLE G + KI +G+
Sbjct: 7 IPSLGESVTEATIAKWYKKLGDAVKTDELLLEIETDKVTLEVNAPCNGTIGKISKTDGA- 65
Query: 277 DVAVGQPIAITVEDPGDVGTVKNSVTSGAEVKGEKETHHDSKDVVKVQKGSFTKISPSAK 336
+V VG E+ G++ + ++ T+ K ++ + H S+ +V + ++PS +
Sbjct: 66 NVTVG-------EEVGEINEIADTDTAWINNKKQEVSQHTSEQLVDKPAMASNILAPSVQ 118
Query: 337 LLILEHGLDASSLQASGPYGTLLKGDVLAAIKSGKVSSRISSHTEKTSPSPLPQTSTAVS 396
L+ E+ LD ++++ +G G + K DVL I + +P+ + A++
Sbjct: 119 KLVTENKLDPNNIKGTGRGGRITKYDVLETINT----------------TPITIETHAIN 162
Query: 397 PGSKSDLELSDSFEDFPNTQIRKVIARRLLESKQNTPHLYLSSDVVLDPLLSFRKELKE- 455
++ + + +++RK IA+RL +S+ L +++ + +++ R + KE
Sbjct: 163 KTNE------ERTQRVRMSRLRKTIAQRLKDSQNTAAILTTFNEIDMSKVIALRNQYKEE 216
Query: 456 ---KHNTKVSVNDIVIKAVAVALKNVPEANAYWDVEKGEIVLCDAIDISIAVATEKGLMT 512
KH K+ +KA ALK +P NA +++ +++ + DI +AV TE+GL+
Sbjct: 217 FEKKHTVKLGFMSFFVKATIEALKLIPSINA--EIDGDDLLYKNYYDIGVAVGTEQGLVV 274
Query: 513 PIVRNADQKSISAISMEVKELAEKARAGKLAPHEFQGGTFSISNLGMFPVDQFCAIINPP 572
P++R+AD+ S + I + LA+KAR GKL+ + GGTFSISN G++ IINPP
Sbjct: 275 PVIRDADKMSFADIEQAIGNLAKKAREGKLSISDLSGGTFSISNGGVYGSLLSTPIINPP 334
Query: 573 QAGILAVGRGNQVVEPVIGSDGNETPAVVTKMNLTLSADHRVFEGKVG 620
Q+GIL + ++ E + DG + M + LS DHR+ +GK G
Sbjct: 335 QSGILGL---HKTEERAVVIDGK--IEIRPMMYIALSYDHRIIDGKEG 377
Score = 52.8 bits (125), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 91 MPALSPTMSQGNIAKWRKKEGDKIEIGDILCEIETDKATVEFESLEEGFLAKILVPEGSK 150
+P+L ++++ IAKW KK GD ++ ++L EIETDK T+E + G + KI +G+
Sbjct: 7 IPSLGESVTEATIAKWYKKLGDAVKTDELLLEIETDKVTLEVNAPCNGTIGKISKTDGA- 65
Query: 151 DVPVGQPIAITVEDAD 166
+V VG+ + E AD
Sbjct: 66 NVTVGEEVGEINEIAD 81
>sp|Q5HQ74|ODP2_STAEQ Dihydrolipoyllysine-residue acetyltransferase component of pyruvate
dehydrogenase complex OS=Staphylococcus epidermidis
(strain ATCC 35984 / RP62A) GN=pdhC PE=3 SV=1
Length = 433
Score = 174 bits (442), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 133/419 (31%), Positives = 210/419 (50%), Gaps = 24/419 (5%)
Query: 215 LEMPALSPTMNQGNIAKWRKNEGDKIEVGDVICEIETDKATLEFECLEEGYLAKILAPEG 274
+P + +++G I KW GD IE DV+ E++ DK+ +E G + ++L EG
Sbjct: 5 FRLPDIGEGIHEGEIVKWFIKAGDTIEEDDVLAEVQNDKSVVEIPSPVSGTVEEVLVDEG 64
Query: 275 SKDVAVGQPIAITVEDP----------GDVGTVKNSVTSGAEVKGEKETHHDSKDVVKVQ 324
+ VAV + + ++ P GD K E+ + S++ +V
Sbjct: 65 T--VAVVGDVIVKIDAPDAEEMQFKGHGDDEDSKKEEKEQESPVQEEASSTQSQEKTEVD 122
Query: 325 KGSFTKISPSAKLLILEHGLDASSLQASGPYGTLLKGDVLAAIKSGKVSSRISSHTEKTS 384
+ K PS + E+G++ ++ SG G + K D+ A + G SS S+T S
Sbjct: 123 ESKTVKAMPSVRKYARENGVNIKAVNGSGKNGRITKEDIDAYLNGG--SSEEGSNTSAAS 180
Query: 385 PSPLPQTSTAVSPGSKSDLELSDSFEDFPNTQIRKVIARRLLESKQNTPHLYLSSDVVLD 444
S A + + + + ++ E P +RK IA+ ++ SK PH+ L ++ +
Sbjct: 181 ESTSSDVVNASATQALPEGDFPETTEKIP--AMRKAIAKAMVNSKHTAPHVTLMDEIDVQ 238
Query: 445 PLLSFRKELKE---KHNTKVSVNDIVIKAVAVALKNVPEANAYWDVEKGEIVLCDAIDIS 501
L RK+ KE + TK++ V+KA+ ALK P N ++ E GE+V +I
Sbjct: 239 ELWDHRKKFKEIAAEQGTKLTFLPYVVKALVSALKKYPALNTSFNEEAGEVVHKHYWNIG 298
Query: 502 IAVATEKGLMTPIVRNADQKSISAISMEVKELAEKARAGKLAPHEFQGGTFSISNLGMFP 561
IA T+KGL+ P+V++AD+KSI IS E+ ELA KAR GKL E +G T +ISN+G
Sbjct: 299 IAADTDKGLLVPVVKHADRKSIFEISDEINELAVKARDGKLTSEEMKGATCTISNIGSAG 358
Query: 562 VDQFCAIINPPQAGILAVGRGNQVVEPVIGSDGNETPAVVTKMNLTLSADHRVFEGKVG 620
F +IN P+ IL +GR Q +P++ DG A V + L+LS DHR +G G
Sbjct: 359 GQWFTPVINHPEVAILGIGRIAQ--KPIV-KDGEIVAAPV--LALSLSFDHRQIDGATG 412
Score = 49.7 bits (117), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 44/79 (55%)
Query: 91 MPALSPTMSQGNIAKWRKKEGDKIEIGDILCEIETDKATVEFESLEEGFLAKILVPEGSK 150
+P + + +G I KW K GD IE D+L E++ DK+ VE S G + ++LV EG+
Sbjct: 7 LPDIGEGIHEGEIVKWFIKAGDTIEEDDVLAEVQNDKSVVEIPSPVSGTVEEVLVDEGTV 66
Query: 151 DVPVGQPIAITVEDADDIQ 169
V + I DA+++Q
Sbjct: 67 AVVGDVIVKIDAPDAEEMQ 85
>sp|P65636|ODP2_STAAN Dihydrolipoyllysine-residue acetyltransferase component of pyruvate
dehydrogenase complex OS=Staphylococcus aureus (strain
N315) GN=pdhC PE=1 SV=1
Length = 430
Score = 174 bits (442), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 132/419 (31%), Positives = 206/419 (49%), Gaps = 27/419 (6%)
Query: 215 LEMPALSPTMNQGNIAKWRKNEGDKIEVGDVICEIETDKATLEFECLEEGYLAKILAPEG 274
+P + +++G I KW GD IE DV+ E++ DK+ +E G + +++ EG
Sbjct: 5 FRLPDIGEGIHEGEIVKWFVKAGDTIEEDDVLAEVQNDKSVVEIPSPVSGTVEEVMVEEG 64
Query: 275 SKDVAVGQPIAITVEDPGDVGTVKNSVTSGAEVKGEKETHHDSKDVVKVQ-----KGSFT 329
+ V + I D D+ + S ++ + KE + V Q +
Sbjct: 65 TVAVVGDVIVKIDAPDAEDMQFKGHDDDSSSKEEPAKEEAPAEQAPVATQTEEVDENRTV 124
Query: 330 KISPSAKLLILEHGLDASSLQASGPYGTLLKGDVLAAIKSGKVSSRISSHTEKTSPSPLP 389
K PS + E G++ ++ SG G + K DV A + G ++ S TS
Sbjct: 125 KAMPSVRKYAREKGVNIKAVSGSGKNGRITKEDVDAYLNGGAPTASNESAASATS----- 179
Query: 390 QTSTAVSPGSKSDLELSDSFEDFPNTQ-----IRKVIARRLLESKQNTPHLYLSSDVVLD 444
A +P + + + L DFP T +R+ IA+ ++ SK PH+ L ++ +
Sbjct: 180 -EEVAETPAAPAAVSLEG---DFPETTEKIPAMRRAIAKAMVNSKHTAPHVTLMDEIDVQ 235
Query: 445 PLLSFRKELKE---KHNTKVSVNDIVIKAVAVALKNVPEANAYWDVEKGEIVLCDAIDIS 501
L RK+ KE + TK++ V+KA+ ALK P N ++ E GEIV +I
Sbjct: 236 ALWDHRKKFKEIAAEQGTKLTFLPYVVKALVSALKKYPALNTSFNEEAGEIVHKHYWNIG 295
Query: 502 IAVATEKGLMTPIVRNADQKSISAISMEVKELAEKARAGKLAPHEFQGGTFSISNLGMFP 561
IA T++GL+ P+V++AD+KSI IS E+ ELA KAR GKL E +G T +ISN+G
Sbjct: 296 IAADTDRGLLVPVVKHADRKSIFQISDEINELAVKARDGKLTADEMKGATCTISNIGSAG 355
Query: 562 VDQFCAIINPPQAGILAVGRGNQVVEPVIGSDGNETPAVVTKMNLTLSADHRVFEGKVG 620
F +IN P+ IL +GR Q +P++ DG A V + L+LS DHR +G G
Sbjct: 356 GQWFTPVINHPEVAILGIGRIAQ--KPIV-KDGEIVAAPV--LALSLSFDHRQIDGATG 409
Score = 53.1 bits (126), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 63/131 (48%), Gaps = 8/131 (6%)
Query: 91 MPALSPTMSQGNIAKWRKKEGDKIEIGDILCEIETDKATVEFESLEEGFLAKILVPEGSK 150
+P + + +G I KW K GD IE D+L E++ DK+ VE S G + +++V EG+
Sbjct: 7 LPDIGEGIHEGEIVKWFVKAGDTIEEDDVLAEVQNDKSVVEIPSPVSGTVEEVMVEEGTV 66
Query: 151 DVPVGQPIAITVEDADDIQHIPATIAGGAEAKEQSSTHQDVKKEAVQETSASRINTSELP 210
V + I DA+D+Q + SS + K+EA E + T E+
Sbjct: 67 AVVGDVIVKIDAPDAEDMQF-------KGHDDDSSSKEEPAKEEAPAEQAPVATQTEEVD 119
Query: 211 P-RVVLEMPAL 220
R V MP++
Sbjct: 120 ENRTVKAMPSV 130
>sp|P65635|ODP2_STAAM Dihydrolipoyllysine-residue acetyltransferase component of pyruvate
dehydrogenase complex OS=Staphylococcus aureus (strain
Mu50 / ATCC 700699) GN=pdhC PE=1 SV=1
Length = 430
Score = 174 bits (442), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 132/419 (31%), Positives = 206/419 (49%), Gaps = 27/419 (6%)
Query: 215 LEMPALSPTMNQGNIAKWRKNEGDKIEVGDVICEIETDKATLEFECLEEGYLAKILAPEG 274
+P + +++G I KW GD IE DV+ E++ DK+ +E G + +++ EG
Sbjct: 5 FRLPDIGEGIHEGEIVKWFVKAGDTIEEDDVLAEVQNDKSVVEIPSPVSGTVEEVMVEEG 64
Query: 275 SKDVAVGQPIAITVEDPGDVGTVKNSVTSGAEVKGEKETHHDSKDVVKVQ-----KGSFT 329
+ V + I D D+ + S ++ + KE + V Q +
Sbjct: 65 TVAVVGDVIVKIDAPDAEDMQFKGHDDDSSSKEEPAKEEAPAEQAPVATQTEEVDENRTV 124
Query: 330 KISPSAKLLILEHGLDASSLQASGPYGTLLKGDVLAAIKSGKVSSRISSHTEKTSPSPLP 389
K PS + E G++ ++ SG G + K DV A + G ++ S TS
Sbjct: 125 KAMPSVRKYAREKGVNIKAVSGSGKNGRITKEDVDAYLNGGAPTASNESAASATS----- 179
Query: 390 QTSTAVSPGSKSDLELSDSFEDFPNTQ-----IRKVIARRLLESKQNTPHLYLSSDVVLD 444
A +P + + + L DFP T +R+ IA+ ++ SK PH+ L ++ +
Sbjct: 180 -EEVAETPAAPAAVSLEG---DFPETTEKIPAMRRAIAKAMVNSKHTAPHVTLMDEIDVQ 235
Query: 445 PLLSFRKELKE---KHNTKVSVNDIVIKAVAVALKNVPEANAYWDVEKGEIVLCDAIDIS 501
L RK+ KE + TK++ V+KA+ ALK P N ++ E GEIV +I
Sbjct: 236 ALWDHRKKFKEIAAEQGTKLTFLPYVVKALVSALKKYPALNTSFNEEAGEIVHKHYWNIG 295
Query: 502 IAVATEKGLMTPIVRNADQKSISAISMEVKELAEKARAGKLAPHEFQGGTFSISNLGMFP 561
IA T++GL+ P+V++AD+KSI IS E+ ELA KAR GKL E +G T +ISN+G
Sbjct: 296 IAADTDRGLLVPVVKHADRKSIFQISDEINELAVKARDGKLTADEMKGATCTISNIGSAG 355
Query: 562 VDQFCAIINPPQAGILAVGRGNQVVEPVIGSDGNETPAVVTKMNLTLSADHRVFEGKVG 620
F +IN P+ IL +GR Q +P++ DG A V + L+LS DHR +G G
Sbjct: 356 GQWFTPVINHPEVAILGIGRIAQ--KPIV-KDGEIVAAPV--LALSLSFDHRQIDGATG 409
Score = 53.1 bits (126), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 63/131 (48%), Gaps = 8/131 (6%)
Query: 91 MPALSPTMSQGNIAKWRKKEGDKIEIGDILCEIETDKATVEFESLEEGFLAKILVPEGSK 150
+P + + +G I KW K GD IE D+L E++ DK+ VE S G + +++V EG+
Sbjct: 7 LPDIGEGIHEGEIVKWFVKAGDTIEEDDVLAEVQNDKSVVEIPSPVSGTVEEVMVEEGTV 66
Query: 151 DVPVGQPIAITVEDADDIQHIPATIAGGAEAKEQSSTHQDVKKEAVQETSASRINTSELP 210
V + I DA+D+Q + SS + K+EA E + T E+
Sbjct: 67 AVVGDVIVKIDAPDAEDMQF-------KGHDDDSSSKEEPAKEEAPAEQAPVATQTEEVD 119
Query: 211 P-RVVLEMPAL 220
R V MP++
Sbjct: 120 ENRTVKAMPSV 130
>sp|Q8NX76|ODP2_STAAW Dihydrolipoyllysine-residue acetyltransferase component of pyruvate
dehydrogenase complex OS=Staphylococcus aureus (strain
MW2) GN=pdhC PE=3 SV=1
Length = 430
Score = 174 bits (441), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 132/419 (31%), Positives = 206/419 (49%), Gaps = 27/419 (6%)
Query: 215 LEMPALSPTMNQGNIAKWRKNEGDKIEVGDVICEIETDKATLEFECLEEGYLAKILAPEG 274
+P + +++G I KW GD IE DV+ E++ DK+ +E G + +++ EG
Sbjct: 5 FRLPDIGEGIHEGEIVKWFVKAGDTIEEDDVLAEVQNDKSVVEIPSPVSGTVEEVMVEEG 64
Query: 275 SKDVAVGQPIAITVEDPGDVGTVKNSVTSGAEVKGEKETHHDSKDVVKVQ-----KGSFT 329
+ V + I D D+ + S ++ + KE + V Q +
Sbjct: 65 TVAVVGDVIVKIDAPDAEDMQFKGHDDDSSSKEEPAKEEAPAEQAPVATQTEEVDENRTV 124
Query: 330 KISPSAKLLILEHGLDASSLQASGPYGTLLKGDVLAAIKSGKVSSRISSHTEKTSPSPLP 389
K PS + E G++ ++ SG G + K DV A + G ++ S TS
Sbjct: 125 KAMPSVRKYAREKGVNIKAVSGSGKNGRITKEDVDAYLNGGAPTASNESAASATS----- 179
Query: 390 QTSTAVSPGSKSDLELSDSFEDFPNTQ-----IRKVIARRLLESKQNTPHLYLSSDVVLD 444
A +P + + + L DFP T +R+ IA+ ++ SK PH+ L ++ +
Sbjct: 180 -EEVAETPAAPAAVTLEG---DFPETTEKIPAMRRAIAKAMVNSKHTAPHVTLMDEIDVQ 235
Query: 445 PLLSFRKELKE---KHNTKVSVNDIVIKAVAVALKNVPEANAYWDVEKGEIVLCDAIDIS 501
L RK+ KE + TK++ V+KA+ ALK P N ++ E GEIV +I
Sbjct: 236 ALWDHRKKFKEIAAEQGTKLTFLPYVVKALVSALKKYPALNTSFNEEAGEIVHKHYWNIG 295
Query: 502 IAVATEKGLMTPIVRNADQKSISAISMEVKELAEKARAGKLAPHEFQGGTFSISNLGMFP 561
IA T++GL+ P+V++AD+KSI IS E+ ELA KAR GKL E +G T +ISN+G
Sbjct: 296 IAADTDRGLLVPVVKHADRKSIFQISDEINELAVKARDGKLTADEMKGATCTISNIGSAG 355
Query: 562 VDQFCAIINPPQAGILAVGRGNQVVEPVIGSDGNETPAVVTKMNLTLSADHRVFEGKVG 620
F +IN P+ IL +GR Q +P++ DG A V + L+LS DHR +G G
Sbjct: 356 GQWFTPVINHPEVAILGIGRIAQ--KPIV-KDGEIVAAPV--LALSLSFDHRQIDGATG 409
Score = 53.1 bits (126), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 63/131 (48%), Gaps = 8/131 (6%)
Query: 91 MPALSPTMSQGNIAKWRKKEGDKIEIGDILCEIETDKATVEFESLEEGFLAKILVPEGSK 150
+P + + +G I KW K GD IE D+L E++ DK+ VE S G + +++V EG+
Sbjct: 7 LPDIGEGIHEGEIVKWFVKAGDTIEEDDVLAEVQNDKSVVEIPSPVSGTVEEVMVEEGTV 66
Query: 151 DVPVGQPIAITVEDADDIQHIPATIAGGAEAKEQSSTHQDVKKEAVQETSASRINTSELP 210
V + I DA+D+Q + SS + K+EA E + T E+
Sbjct: 67 AVVGDVIVKIDAPDAEDMQF-------KGHDDDSSSKEEPAKEEAPAEQAPVATQTEEVD 119
Query: 211 P-RVVLEMPAL 220
R V MP++
Sbjct: 120 ENRTVKAMPSV 130
>sp|Q6GAB9|ODP2_STAAS Dihydrolipoyllysine-residue acetyltransferase component of pyruvate
dehydrogenase complex OS=Staphylococcus aureus (strain
MSSA476) GN=pdhC PE=3 SV=1
Length = 430
Score = 174 bits (441), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 132/419 (31%), Positives = 206/419 (49%), Gaps = 27/419 (6%)
Query: 215 LEMPALSPTMNQGNIAKWRKNEGDKIEVGDVICEIETDKATLEFECLEEGYLAKILAPEG 274
+P + +++G I KW GD IE DV+ E++ DK+ +E G + +++ EG
Sbjct: 5 FRLPDIGEGIHEGEIVKWFVKAGDTIEEDDVLAEVQNDKSVVEIPSPVSGTVEEVMVEEG 64
Query: 275 SKDVAVGQPIAITVEDPGDVGTVKNSVTSGAEVKGEKETHHDSKDVVKVQ-----KGSFT 329
+ V + I D D+ + S ++ + KE + V Q +
Sbjct: 65 TVAVVGDVIVKIDAPDAEDMQFKGHDDDSSSKEEPAKEEAPAEQAPVATQTEEVDENRTV 124
Query: 330 KISPSAKLLILEHGLDASSLQASGPYGTLLKGDVLAAIKSGKVSSRISSHTEKTSPSPLP 389
K PS + E G++ ++ SG G + K DV A + G ++ S TS
Sbjct: 125 KAMPSVRKYAREKGVNIKAVSGSGKNGRITKEDVDAYLNGGAPTASNESAASATS----- 179
Query: 390 QTSTAVSPGSKSDLELSDSFEDFPNTQ-----IRKVIARRLLESKQNTPHLYLSSDVVLD 444
A +P + + + L DFP T +R+ IA+ ++ SK PH+ L ++ +
Sbjct: 180 -EEVAETPAAPAAVTLEG---DFPETTEKIPAMRRAIAKAMVNSKHTAPHVTLMDEIDVQ 235
Query: 445 PLLSFRKELKE---KHNTKVSVNDIVIKAVAVALKNVPEANAYWDVEKGEIVLCDAIDIS 501
L RK+ KE + TK++ V+KA+ ALK P N ++ E GEIV +I
Sbjct: 236 ALWDHRKKFKEIAAEQGTKLTFLPYVVKALVSALKKYPALNTSFNEEAGEIVHKHYWNIG 295
Query: 502 IAVATEKGLMTPIVRNADQKSISAISMEVKELAEKARAGKLAPHEFQGGTFSISNLGMFP 561
IA T++GL+ P+V++AD+KSI IS E+ ELA KAR GKL E +G T +ISN+G
Sbjct: 296 IAADTDRGLLVPVVKHADRKSIFQISDEINELAVKARDGKLTADEMKGATCTISNIGSAG 355
Query: 562 VDQFCAIINPPQAGILAVGRGNQVVEPVIGSDGNETPAVVTKMNLTLSADHRVFEGKVG 620
F +IN P+ IL +GR Q +P++ DG A V + L+LS DHR +G G
Sbjct: 356 GQWFTPVINHPEVAILGIGRIAQ--KPIV-KDGEIVAAPV--LALSLSFDHRQIDGATG 409
Score = 53.1 bits (126), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 63/131 (48%), Gaps = 8/131 (6%)
Query: 91 MPALSPTMSQGNIAKWRKKEGDKIEIGDILCEIETDKATVEFESLEEGFLAKILVPEGSK 150
+P + + +G I KW K GD IE D+L E++ DK+ VE S G + +++V EG+
Sbjct: 7 LPDIGEGIHEGEIVKWFVKAGDTIEEDDVLAEVQNDKSVVEIPSPVSGTVEEVMVEEGTV 66
Query: 151 DVPVGQPIAITVEDADDIQHIPATIAGGAEAKEQSSTHQDVKKEAVQETSASRINTSELP 210
V + I DA+D+Q + SS + K+EA E + T E+
Sbjct: 67 AVVGDVIVKIDAPDAEDMQF-------KGHDDDSSSKEEPAKEEAPAEQAPVATQTEEVD 119
Query: 211 P-RVVLEMPAL 220
R V MP++
Sbjct: 120 ENRTVKAMPSV 130
>sp|Q5HGY9|ODP2_STAAC Dihydrolipoyllysine-residue acetyltransferase component of pyruvate
dehydrogenase complex OS=Staphylococcus aureus (strain
COL) GN=pdhC PE=3 SV=1
Length = 430
Score = 174 bits (441), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 132/419 (31%), Positives = 206/419 (49%), Gaps = 27/419 (6%)
Query: 215 LEMPALSPTMNQGNIAKWRKNEGDKIEVGDVICEIETDKATLEFECLEEGYLAKILAPEG 274
+P + +++G I KW GD IE DV+ E++ DK+ +E G + +++ EG
Sbjct: 5 FRLPDIGEGIHEGEIVKWFVKAGDTIEEDDVLAEVQNDKSVVEIPSPVSGTVEEVMVEEG 64
Query: 275 SKDVAVGQPIAITVEDPGDVGTVKNSVTSGAEVKGEKETHHDSKDVVKVQ-----KGSFT 329
+ V + I D D+ + S ++ + KE + V Q +
Sbjct: 65 TVAVVGDVIVKIDAPDAEDMQFKGHDDDSSSKEEPAKEEAPAEQAPVATQTEEVDENRTV 124
Query: 330 KISPSAKLLILEHGLDASSLQASGPYGTLLKGDVLAAIKSGKVSSRISSHTEKTSPSPLP 389
K PS + E G++ ++ SG G + K DV A + G ++ S TS
Sbjct: 125 KAMPSVRKYAREKGVNIKAVSGSGKNGRITKEDVDAYLNGGAPTASNESAASATS----- 179
Query: 390 QTSTAVSPGSKSDLELSDSFEDFPNTQ-----IRKVIARRLLESKQNTPHLYLSSDVVLD 444
A +P + + + L DFP T +R+ IA+ ++ SK PH+ L ++ +
Sbjct: 180 -EEVAETPAAPAAVTLEG---DFPETTEKIPAMRRAIAKAMVNSKHTAPHVTLMDEIDVQ 235
Query: 445 PLLSFRKELKE---KHNTKVSVNDIVIKAVAVALKNVPEANAYWDVEKGEIVLCDAIDIS 501
L RK+ KE + TK++ V+KA+ ALK P N ++ E GEIV +I
Sbjct: 236 ALWDHRKKFKEIAAEQGTKLTFLPYVVKALVSALKKYPALNTSFNEEAGEIVHKHYWNIG 295
Query: 502 IAVATEKGLMTPIVRNADQKSISAISMEVKELAEKARAGKLAPHEFQGGTFSISNLGMFP 561
IA T++GL+ P+V++AD+KSI IS E+ ELA KAR GKL E +G T +ISN+G
Sbjct: 296 IAADTDRGLLVPVVKHADRKSIFQISDEINELAVKARDGKLTADEMKGATCTISNIGSAG 355
Query: 562 VDQFCAIINPPQAGILAVGRGNQVVEPVIGSDGNETPAVVTKMNLTLSADHRVFEGKVG 620
F +IN P+ IL +GR Q +P++ DG A V + L+LS DHR +G G
Sbjct: 356 GQWFTPVINHPEVAILGIGRIAQ--KPIV-KDGEIVAAPV--LALSLSFDHRQIDGATG 409
Score = 53.1 bits (126), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 63/131 (48%), Gaps = 8/131 (6%)
Query: 91 MPALSPTMSQGNIAKWRKKEGDKIEIGDILCEIETDKATVEFESLEEGFLAKILVPEGSK 150
+P + + +G I KW K GD IE D+L E++ DK+ VE S G + +++V EG+
Sbjct: 7 LPDIGEGIHEGEIVKWFVKAGDTIEEDDVLAEVQNDKSVVEIPSPVSGTVEEVMVEEGTV 66
Query: 151 DVPVGQPIAITVEDADDIQHIPATIAGGAEAKEQSSTHQDVKKEAVQETSASRINTSELP 210
V + I DA+D+Q + SS + K+EA E + T E+
Sbjct: 67 AVVGDVIVKIDAPDAEDMQF-------KGHDDDSSSKEEPAKEEAPAEQAPVATQTEEVD 119
Query: 211 P-RVVLEMPAL 220
R V MP++
Sbjct: 120 ENRTVKAMPSV 130
>sp|Q4UKI7|ODO2_RICFE Dihydrolipoyllysine-residue succinyltransferase component of
2-oxoglutarate dehydrogenase complex OS=Rickettsia felis
(strain ATCC VR-1525 / URRWXCal2) GN=sucB PE=3 SV=1
Length = 401
Score = 174 bits (441), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 127/409 (31%), Positives = 213/409 (52%), Gaps = 40/409 (9%)
Query: 217 MPALSPTMNQGNIAKWRKNEGDKIEVGDVICEIETDKATLEFECLEEGYLAKILAPEGSK 276
+P+L ++ + IAKW K EGD ++ +++ EIET+K TLE +G + KI +G+
Sbjct: 7 VPSLGESVTEATIAKWYKKEGDPVKTDELLLEIETEKVTLEVNAPCDGTIGKISKTDGA- 65
Query: 277 DVAVGQPIAITVEDPGDVGTVKNSV-TSGAEVKGEKETHHDSKDVVKVQKGSFTKISPSA 335
+VAVG+ I E G N+ T+ K + T S+ V+ ++PS
Sbjct: 66 NVAVGEEIGEINE-----GAAANTAGTNNESAKAQAVTQPTSEKPVEKPAVVNNILAPSV 120
Query: 336 KLLILEHGLDASSLQASGPYGTLLKGDVLAAIKSGKVSSRISSHTEKTSPSPLPQTSTAV 395
+ L+ E+ LD ++++ +G G + KGDVL I + P +T+
Sbjct: 121 QKLVTENKLDPNNIKGTGRDGRITKGDVLETINT-------------------PSAATST 161
Query: 396 SPGSKSDLELSDSFEDFPNTQIRKVIARRLLESKQNTPHLYLSSDVVLDPLLSFRKELKE 455
+K++ E + +++RK IA+RL +S+ L +++ + +++ R + KE
Sbjct: 162 PTVNKTNEE---RVQRVRMSRLRKTIAQRLKDSQNTAAILTTFNEIDMSKVIALRNQYKE 218
Query: 456 ----KHNTKVSVNDIVIKAVAVALKNVPEANAYWDVEKGEIVLCDAIDISIAVATEKGLM 511
KH K+ +KA ALK +P NA +++ ++V + DI +AV TE+GL+
Sbjct: 219 EFEKKHLVKLGFMSFFVKATIEALKLIPSVNA--EIDGDDLVYKNYYDIGVAVGTEQGLV 276
Query: 512 TPIVRNADQKSISAISMEVKELAEKARAGKLAPHEFQGGTFSISNLGMFPVDQFCAIINP 571
P+VR+AD+ + + + LA+KAR GKL+ + GGTFSISN G++ IINP
Sbjct: 277 VPVVRDADKMGFAEVEKAIGTLAKKAREGKLSMADLSGGTFSISNGGVYGSLLSTPIINP 336
Query: 572 PQAGILAVGRGNQVVEPVIGSDGNETPAVVTKMNLTLSADHRVFEGKVG 620
PQ+GIL + ++ E + DG + M + LS DHR+ +GK G
Sbjct: 337 PQSGILGL---HKTEERAVVIDGK--IEIRPMMYIALSYDHRIIDGKEG 380
Score = 53.9 bits (128), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 61/106 (57%), Gaps = 1/106 (0%)
Query: 91 MPALSPTMSQGNIAKWRKKEGDKIEIGDILCEIETDKATVEFESLEEGFLAKILVPEGSK 150
+P+L ++++ IAKW KKEGD ++ ++L EIET+K T+E + +G + KI +G+
Sbjct: 7 VPSLGESVTEATIAKWYKKEGDPVKTDELLLEIETEKVTLEVNAPCDGTIGKISKTDGA- 65
Query: 151 DVPVGQPIAITVEDADDIQHIPATIAGGAEAKEQSSTHQDVKKEAV 196
+V VG+ I E A + A+A Q ++ + V+K AV
Sbjct: 66 NVAVGEEIGEINEGAAANTAGTNNESAKAQAVTQPTSEKPVEKPAV 111
>sp|Q9ZDY4|ODO2_RICPR Dihydrolipoyllysine-residue succinyltransferase component of
2-oxoglutarate dehydrogenase complex OS=Rickettsia
prowazekii (strain Madrid E) GN=sucB PE=3 SV=1
Length = 401
Score = 173 bits (439), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 120/408 (29%), Positives = 213/408 (52%), Gaps = 38/408 (9%)
Query: 217 MPALSPTMNQGNIAKWRKNEGDKIEVGDVICEIETDKATLEFECLEEGYLAKILAPEGSK 276
+P+L ++ + IAKW K GD ++ +++ EIET+K TLE G + KI +G+
Sbjct: 7 IPSLGESVTEATIAKWYKKLGDSVKTDELLLEIETEKVTLEVNAPCNGTIEKIAKTDGA- 65
Query: 277 DVAVGQPIAITVEDPGDVGTVKNSVTSGAEVKGEKETHHDSKDVVKVQKGSFTKISPSAK 336
+V VG+ I + +V + T+ K + HDS+ +V S ++PS +
Sbjct: 66 NVTVGEEIG----EINEVVDTDTACTNNNSYKKQAIVQHDSEQIVDKPASSSNILAPSVQ 121
Query: 337 LLILEHGLDASSLQASGPYGTLLKGDVLAAIKSGKVSSRISSHTEKTSPSPLPQTSTAVS 396
L+ E+ LD ++++ +G G + K DVL I + +P+ + A++
Sbjct: 122 KLVTENKLDPNNIKGTGRGGRITKCDVLETINT----------------TPVTIETPALN 165
Query: 397 PGSKSDLELSDSFEDFPNTQIRKVIARRLLESKQNTPHLYLSSDVVLDPLLSFRKELKE- 455
++ + + +++RK IA+RL +S+ L +++ + +++ R + KE
Sbjct: 166 KTNE------ERTQRVRMSRLRKTIAQRLKDSQNTAAILTTFNEIDMSKVIALRNQYKEE 219
Query: 456 ---KHNTKVSVNDIVIKAVAVALKNVPEANAYWDVEKGEIVLCDAIDISIAVATEKGLMT 512
KH K+ +KA ALK +P NA +++ +++ + DI +AV T++GL+
Sbjct: 220 FEKKHTVKLGFMSFFVKATIEALKLIPSINA--EIDGDDLLYKNYYDIGVAVGTDQGLVV 277
Query: 513 PIVRNADQKSISAISMEVKELAEKARAGKLAPHEFQGGTFSISNLGMFPVDQFCAIINPP 572
P+VR+AD+ + + + +LA+KAR GKL+ + GGTFSISN G++ IINPP
Sbjct: 278 PVVRDADKMGFADVEQAIGDLAKKAREGKLSMSDLSGGTFSISNGGVYGSLLSTPIINPP 337
Query: 573 QAGILAVGRGNQVVEPVIGSDGNETPAVVTKMNLTLSADHRVFEGKVG 620
Q+GIL + ++ E + DG + M + LS DHR+ +GK G
Sbjct: 338 QSGILGL---HKTEERAVVIDGK--IEIRPMMYIALSYDHRIIDGKEG 380
Score = 50.4 bits (119), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 81/173 (46%), Gaps = 17/173 (9%)
Query: 91 MPALSPTMSQGNIAKWRKKEGDKIEIGDILCEIETDKATVEFESLEEGFLAKILVPEGSK 150
+P+L ++++ IAKW KK GD ++ ++L EIET+K T+E + G + KI +G+
Sbjct: 7 IPSLGESVTEATIAKWYKKLGDSVKTDELLLEIETEKVTLEVNAPCNGTIEKIAKTDGA- 65
Query: 151 DVPVGQPIAITVEDADDIQHIPATIAGGAEAKEQSSTHQDVKKEAVQETSASRINTSELP 210
+V VG+ I + +++ K+Q+ D ++ + S+S I L
Sbjct: 66 NVTVGEEIG----EINEVVDTDTACTNNNSYKKQAIVQHDSEQIVDKPASSSNI----LA 117
Query: 211 PRV--VLEMPALSPTMNQGNIAKWRKNEGDKIEVGDVICEIETDKATLEFECL 261
P V ++ L P +G G +I DV+ I T T+E L
Sbjct: 118 PSVQKLVTENKLDPNNIKGT------GRGGRITKCDVLETINTTPVTIETPAL 164
>sp|Q6GHZ0|ODP2_STAAR Dihydrolipoyllysine-residue acetyltransferase component of pyruvate
dehydrogenase complex OS=Staphylococcus aureus (strain
MRSA252) GN=pdhC PE=3 SV=1
Length = 430
Score = 173 bits (438), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 131/419 (31%), Positives = 206/419 (49%), Gaps = 27/419 (6%)
Query: 215 LEMPALSPTMNQGNIAKWRKNEGDKIEVGDVICEIETDKATLEFECLEEGYLAKILAPEG 274
+P + +++G I KW GD IE DV+ E++ DK+ +E G + +++ EG
Sbjct: 5 FRLPDIGEGIHEGEIVKWFVKAGDTIEEDDVLAEVQNDKSVVEIPSPVSGTVEEVMVEEG 64
Query: 275 SKDVAVGQPIAITVEDPGDVGTVKNSVTSGAEVKGEKETHHDSKDVVKVQ-----KGSFT 329
+ V + I D D+ + S ++ + KE + V Q +
Sbjct: 65 TVAVVGDVIVKIDAPDAEDMQFKGHDDDSSSKEEPAKEEAPAEQAPVATQTEEVDENRTV 124
Query: 330 KISPSAKLLILEHGLDASSLQASGPYGTLLKGDVLAAIKSGKVSSRISSHTEKTSPSPLP 389
K PS + E G++ ++ SG G + K DV A + G ++ S T+
Sbjct: 125 KAMPSVRKYAREKGVNIKAVSGSGKNGRITKEDVDAYLNGGAPTASNESAASATN----- 179
Query: 390 QTSTAVSPGSKSDLELSDSFEDFPNTQ-----IRKVIARRLLESKQNTPHLYLSSDVVLD 444
A +P + + + L DFP T +R+ IA+ ++ SK PH+ L ++ +
Sbjct: 180 -EEVAETPAAPAAVSLEG---DFPETTEKIPAMRRAIAKAMVNSKHTAPHVTLMDEIDVQ 235
Query: 445 PLLSFRKELKE---KHNTKVSVNDIVIKAVAVALKNVPEANAYWDVEKGEIVLCDAIDIS 501
L RK+ KE + TK++ V+KA+ ALK P N ++ E GEIV +I
Sbjct: 236 ALWDHRKKFKEIAAEQGTKLTFLPYVVKALVSALKKYPALNTSFNEEAGEIVHKHYWNIG 295
Query: 502 IAVATEKGLMTPIVRNADQKSISAISMEVKELAEKARAGKLAPHEFQGGTFSISNLGMFP 561
IA T++GL+ P+V++AD+KSI IS E+ ELA KAR GKL E +G T +ISN+G
Sbjct: 296 IAADTDRGLLVPVVKHADRKSIFQISDEINELAVKARDGKLTADEMKGATCTISNIGSAG 355
Query: 562 VDQFCAIINPPQAGILAVGRGNQVVEPVIGSDGNETPAVVTKMNLTLSADHRVFEGKVG 620
F +IN P+ IL +GR Q +P++ DG A V + L+LS DHR +G G
Sbjct: 356 GQWFTPVINHPEVAILGIGRIAQ--KPIV-KDGEIVAAPV--LALSLSFDHRQIDGATG 409
Score = 53.1 bits (126), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 63/131 (48%), Gaps = 8/131 (6%)
Query: 91 MPALSPTMSQGNIAKWRKKEGDKIEIGDILCEIETDKATVEFESLEEGFLAKILVPEGSK 150
+P + + +G I KW K GD IE D+L E++ DK+ VE S G + +++V EG+
Sbjct: 7 LPDIGEGIHEGEIVKWFVKAGDTIEEDDVLAEVQNDKSVVEIPSPVSGTVEEVMVEEGTV 66
Query: 151 DVPVGQPIAITVEDADDIQHIPATIAGGAEAKEQSSTHQDVKKEAVQETSASRINTSELP 210
V + I DA+D+Q + SS + K+EA E + T E+
Sbjct: 67 AVVGDVIVKIDAPDAEDMQF-------KGHDDDSSSKEEPAKEEAPAEQAPVATQTEEVD 119
Query: 211 P-RVVLEMPAL 220
R V MP++
Sbjct: 120 ENRTVKAMPSV 130
>sp|Q59821|ODP2_STAAU Dihydrolipoyllysine-residue acetyltransferase component of pyruvate
dehydrogenase complex OS=Staphylococcus aureus GN=pdhC
PE=3 SV=1
Length = 430
Score = 173 bits (438), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 131/419 (31%), Positives = 206/419 (49%), Gaps = 27/419 (6%)
Query: 215 LEMPALSPTMNQGNIAKWRKNEGDKIEVGDVICEIETDKATLEFECLEEGYLAKILAPEG 274
+P + +++G I KW GD IE DV+ E++ DK+ +E G + +++ EG
Sbjct: 5 FRLPDIGEGIHEGEIVKWFVKAGDTIEEDDVLAEVQNDKSVVEIPSPVSGTVEEVMVEEG 64
Query: 275 SKDVAVGQPIAITVEDPGDVGTVKNSVTSGAEVKGEKETHHDSKDVVKVQ-----KGSFT 329
+ V + I D D+ + S ++ + KE + V Q +
Sbjct: 65 TVAVVGDVIVKIDAPDAEDMQFKGHDDDSSSKEEPAKEEAPAEQAPVATQTEEVDENRTV 124
Query: 330 KISPSAKLLILEHGLDASSLQASGPYGTLLKGDVLAAIKSGKVSSRISSHTEKTSPSPLP 389
K PS + E G++ ++ SG G + K DV A + G ++ S T+
Sbjct: 125 KAMPSVRKYAREKGVNIKAVSGSGKNGRITKEDVDAYLNGGAPTASNESADSATN----- 179
Query: 390 QTSTAVSPGSKSDLELSDSFEDFPNTQ-----IRKVIARRLLESKQNTPHLYLSSDVVLD 444
A +P + + + L DFP T +R+ IA+ ++ SK PH+ L ++ +
Sbjct: 180 -EEVAETPAAPAAVSLEG---DFPETTEKIPAMRRAIAKAMVNSKHTAPHVTLMDEIDVQ 235
Query: 445 PLLSFRKELKE---KHNTKVSVNDIVIKAVAVALKNVPEANAYWDVEKGEIVLCDAIDIS 501
L RK+ KE + TK++ V+KA+ ALK P N ++ E GEIV +I
Sbjct: 236 ALWDHRKKFKEIAAEQGTKLTFLPYVVKALVSALKKYPALNTSFNEEAGEIVHKHYWNIG 295
Query: 502 IAVATEKGLMTPIVRNADQKSISAISMEVKELAEKARAGKLAPHEFQGGTFSISNLGMFP 561
IA T++GL+ P+V++AD+KSI IS E+ ELA KAR GKL E +G T +ISN+G
Sbjct: 296 IAADTDRGLLVPVVKHADRKSIFQISDEINELAVKARDGKLTADEMKGATCTISNIGSAG 355
Query: 562 VDQFCAIINPPQAGILAVGRGNQVVEPVIGSDGNETPAVVTKMNLTLSADHRVFEGKVG 620
F +IN P+ IL +GR Q +P++ DG A V + L+LS DHR +G G
Sbjct: 356 GQWFTPVINHPEVAILGIGRIAQ--KPIV-KDGEIVAAPV--LALSLSFDHRQIDGATG 409
Score = 53.1 bits (126), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 63/131 (48%), Gaps = 8/131 (6%)
Query: 91 MPALSPTMSQGNIAKWRKKEGDKIEIGDILCEIETDKATVEFESLEEGFLAKILVPEGSK 150
+P + + +G I KW K GD IE D+L E++ DK+ VE S G + +++V EG+
Sbjct: 7 LPDIGEGIHEGEIVKWFVKAGDTIEEDDVLAEVQNDKSVVEIPSPVSGTVEEVMVEEGTV 66
Query: 151 DVPVGQPIAITVEDADDIQHIPATIAGGAEAKEQSSTHQDVKKEAVQETSASRINTSELP 210
V + I DA+D+Q + SS + K+EA E + T E+
Sbjct: 67 AVVGDVIVKIDAPDAEDMQF-------KGHDDDSSSKEEPAKEEAPAEQAPVATQTEEVD 119
Query: 211 P-RVVLEMPAL 220
R V MP++
Sbjct: 120 ENRTVKAMPSV 130
>sp|O31550|ACOC_BACSU Dihydrolipoyllysine-residue acetyltransferase component of acetoin
cleaving system OS=Bacillus subtilis (strain 168)
GN=acoC PE=3 SV=1
Length = 398
Score = 170 bits (431), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 123/420 (29%), Positives = 206/420 (49%), Gaps = 69/420 (16%)
Query: 217 MPALSPTMNQGNIAKWRKNEGDKIEVGDVICEIETDKATLEFECLEEGYLAKILAPEGSK 276
MP L M QG ++ W K GD +E G+ I I+++K +E E E+G L I EG +
Sbjct: 7 MPKLGMAMKQGEVSIWNKKVGDPVEKGESIASIQSEKIEMEIEAPEKGTLIDIKVKEG-E 65
Query: 277 DVAVGQPIAI------TVEDPGDVGTVKNSVTSGAE-VKGEKETHHDSKDVVKVQKGSFT 329
+V G I +V++ ++++ + VK E + KD +K
Sbjct: 66 EVPPGTAICYIGDANESVQEEAGAPVAEDNMPQAVQPVKQENKPAASKKDRMK------- 118
Query: 330 KISPSAKLLILEHGLDASSLQASGPYGTLLKGDVLAAIKSGKVSSRISSHTEKTSPSPLP 389
ISP A+ + + GLD L+ +GP G ++K DV A+ K K P+
Sbjct: 119 -ISPVARKIAEKAGLDLKQLKGTGPGGRIVKDDVTKALAEQK----------KDQAKPVS 167
Query: 390 QTSTAVSPGSKSDLELSDSFEDFPNTQIRKVIARRLLESKQNTPHLYLSSDVVLDPLLSF 449
+ ++ P T +RKVIA R+ ES N+ L ++ + L +
Sbjct: 168 EQKA----------------QEIPVTGMRKVIAARMQESLANSAQLTITMKADITKLATL 211
Query: 450 RKEL----KEKHNTKVSVNDIVIKAVAVALKNVPEANAYWDVEKGEIVLCDAIDISIAVA 505
+K+L +E++ TK+++ V +A +AL+ P N+++ E+ I+ + + +AVA
Sbjct: 212 QKQLSPTAEERYGTKLTITHFVSRAAVLALQAHPVLNSFYQNER--IITHPHVHLGMAVA 269
Query: 506 TEKGLMTPIVRNADQKSISAISMEVKELAEKARAGKLAPHEFQGGTFSISNLGMFPVDQF 565
E GL+ P++R+A++ S+ ++ + E A+KAR G+ E QG TFSI+NLG F V+ F
Sbjct: 270 LENGLVVPVIRHAEKLSLIELAQSISENAKKAREGRAGSEELQGSTFSITNLGAFGVEHF 329
Query: 566 CAIINPPQAGILAVG--------RGNQVVEPVIGSDGNETPAVVTKMNLTLSADHRVFEG 617
I+NPP+ GIL +G +G ++V I + L+L+ DHR +G
Sbjct: 330 TPILNPPETGILGIGASYDTPVYQGEEIVRSTI-------------LPLSLTFDHRACDG 376
Score = 52.4 bits (124), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 46/81 (56%), Gaps = 1/81 (1%)
Query: 89 VGMPALSPTMSQGNIAKWRKKEGDKIEIGDILCEIETDKATVEFESLEEGFLAKILVPEG 148
V MP L M QG ++ W KK GD +E G+ + I+++K +E E+ E+G L I V EG
Sbjct: 5 VVMPKLGMAMKQGEVSIWNKKVGDPVEKGESIASIQSEKIEMEIEAPEKGTLIDIKVKEG 64
Query: 149 SKDVPVGQPIAITVEDADDIQ 169
++VP G I + + +Q
Sbjct: 65 -EEVPPGTAICYIGDANESVQ 84
>sp|P0AFG6|ODO2_ECOLI Dihydrolipoyllysine-residue succinyltransferase component of
2-oxoglutarate dehydrogenase complex OS=Escherichia coli
(strain K12) GN=sucB PE=1 SV=2
Length = 405
Score = 168 bits (426), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 121/409 (29%), Positives = 201/409 (49%), Gaps = 41/409 (10%)
Query: 217 MPALSPTMNQGNIAKWRKNEGDKIEVGDVICEIETDKATLEFECLEEGYLAKILAPEGSK 276
+P L ++ +A W K GD + +V+ EIETDK LE +G L +L EG+
Sbjct: 8 VPDLPESVADATVATWHKKPGDAVVRDEVLVEIETDKVVLEVPASADGILDAVLEDEGT- 66
Query: 277 DVAVGQPIAITVEDPGDVGTVKNSVTSGAEVKG---EKETHHDSKDVVKVQKGSFTKISP 333
TV +G ++ ++G E EK + + +++ + +SP
Sbjct: 67 ----------TVTSRQILGRLREGNSAGKETSAKSEEKASTPAQRQQASLEEQNNDALSP 116
Query: 334 SAKLLILEHGLDASSLQASGPYGTLLKGDVLAAIKSGKVSSRISSHTEKTSPSPLPQTST 393
+ + L+ EH LDAS+++ +G G L + DV H K +
Sbjct: 117 AIRRLLAEHNLDASAIKGTGVGGRLTREDV-------------EKHLAKAPAKESAPAAA 163
Query: 394 AVSPGSKSDLELSDSFEDFPNTQIRKVIARRLLESKQNTPHLYLSSDVVLDPLLSFRKEL 453
A + S + P T++RK +A RLLE+K +T L ++V + P++ RK+
Sbjct: 164 APAAQPALAAR---SEKRVPMTRLRKRVAERLLEAKNSTAMLTTFNEVNMKPIMDLRKQY 220
Query: 454 KE----KHNTKVSVNDIVIKAVAVALKNVPEANAYWDVEKGEIVLCDAIDISIAVATEKG 509
E +H ++ +KAV ALK PE NA D + ++V + D+S+AV+T +G
Sbjct: 221 GEAFEKRHGIRLGFMSFYVKAVVEALKRYPEVNASIDGD--DVVYHNYFDVSMAVSTPRG 278
Query: 510 LMTPIVRNADQKSISAISMEVKELAEKARAGKLAPHEFQGGTFSISNLGMFPVDQFCAII 569
L+TP++R+ D ++ I ++KELA K R GKL + GG F+I+N G+F II
Sbjct: 279 LVTPVLRDVDTLGMADIEKKIKELAVKGRDGKLTVEDLTGGNFTITNGGVFGSLMSTPII 338
Query: 570 NPPQAGILAVGRGNQVVEPVIGSDGNETPAVVTKMNLTLSADHRVFEGK 618
NPPQ+ IL + + + + + +G ++ M L LS DHR+ +G+
Sbjct: 339 NPPQSAILGM---HAIKDRPMAVNGQ--VEILPMMYLALSYDHRLIDGR 382
Score = 44.3 bits (103), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 34/59 (57%)
Query: 91 MPALSPTMSQGNIAKWRKKEGDKIEIGDILCEIETDKATVEFESLEEGFLAKILVPEGS 149
+P L +++ +A W KK GD + ++L EIETDK +E + +G L +L EG+
Sbjct: 8 VPDLPESVADATVATWHKKPGDAVVRDEVLVEIETDKVVLEVPASADGILDAVLEDEGT 66
>sp|P0AFG7|ODO2_ECO57 Dihydrolipoyllysine-residue succinyltransferase component of
2-oxoglutarate dehydrogenase complex OS=Escherichia coli
O157:H7 GN=sucB PE=1 SV=2
Length = 405
Score = 168 bits (426), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 121/409 (29%), Positives = 201/409 (49%), Gaps = 41/409 (10%)
Query: 217 MPALSPTMNQGNIAKWRKNEGDKIEVGDVICEIETDKATLEFECLEEGYLAKILAPEGSK 276
+P L ++ +A W K GD + +V+ EIETDK LE +G L +L EG+
Sbjct: 8 VPDLPESVADATVATWHKKPGDAVVRDEVLVEIETDKVVLEVPASADGILDAVLEDEGT- 66
Query: 277 DVAVGQPIAITVEDPGDVGTVKNSVTSGAEVKG---EKETHHDSKDVVKVQKGSFTKISP 333
TV +G ++ ++G E EK + + +++ + +SP
Sbjct: 67 ----------TVTSRQILGRLREGNSAGKETSAKSEEKASTPAQRQQASLEEQNNDALSP 116
Query: 334 SAKLLILEHGLDASSLQASGPYGTLLKGDVLAAIKSGKVSSRISSHTEKTSPSPLPQTST 393
+ + L+ EH LDAS+++ +G G L + DV H K +
Sbjct: 117 AIRRLLAEHNLDASAIKGTGVGGRLTREDV-------------EKHLAKAPAKESAPAAA 163
Query: 394 AVSPGSKSDLELSDSFEDFPNTQIRKVIARRLLESKQNTPHLYLSSDVVLDPLLSFRKEL 453
A + S + P T++RK +A RLLE+K +T L ++V + P++ RK+
Sbjct: 164 APAAQPALAAR---SEKRVPMTRLRKRVAERLLEAKNSTAMLTTFNEVNMKPIMDLRKQY 220
Query: 454 KE----KHNTKVSVNDIVIKAVAVALKNVPEANAYWDVEKGEIVLCDAIDISIAVATEKG 509
E +H ++ +KAV ALK PE NA D + ++V + D+S+AV+T +G
Sbjct: 221 GEAFEKRHGIRLGFMSFYVKAVVEALKRYPEVNASIDGD--DVVYHNYFDVSMAVSTPRG 278
Query: 510 LMTPIVRNADQKSISAISMEVKELAEKARAGKLAPHEFQGGTFSISNLGMFPVDQFCAII 569
L+TP++R+ D ++ I ++KELA K R GKL + GG F+I+N G+F II
Sbjct: 279 LVTPVLRDVDTLGMADIEKKIKELAVKGRDGKLTVEDLTGGNFTITNGGVFGSLMSTPII 338
Query: 570 NPPQAGILAVGRGNQVVEPVIGSDGNETPAVVTKMNLTLSADHRVFEGK 618
NPPQ+ IL + + + + + +G ++ M L LS DHR+ +G+
Sbjct: 339 NPPQSAILGM---HAIKDRPMAVNGQ--VEILPMMYLALSYDHRLIDGR 382
Score = 44.3 bits (103), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 34/59 (57%)
Query: 91 MPALSPTMSQGNIAKWRKKEGDKIEIGDILCEIETDKATVEFESLEEGFLAKILVPEGS 149
+P L +++ +A W KK GD + ++L EIETDK +E + +G L +L EG+
Sbjct: 8 VPDLPESVADATVATWHKKPGDAVVRDEVLVEIETDKVVLEVPASADGILDAVLEDEGT 66
>sp|P21883|ODP2_BACSU Dihydrolipoyllysine-residue acetyltransferase component of pyruvate
dehydrogenase complex OS=Bacillus subtilis (strain 168)
GN=pdhC PE=1 SV=2
Length = 442
Score = 167 bits (424), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 130/434 (29%), Positives = 208/434 (47%), Gaps = 51/434 (11%)
Query: 215 LEMPALSPTMNQGNIAKWRKNEGDKIEVGDVICEIETDKATLEFECLEEGYLAKILAPEG 274
++P + +++G I KW D+++ DV+ E++ DKA +E +G + ++ EG
Sbjct: 5 FKLPDIGEGIHEGEIVKWFVKPNDEVDEDDVLAEVQNDKAVVEIPSPVKGKVLELKVEEG 64
Query: 275 SKDVAVGQPIAITVEDPG-------------DVGT---VKNSVTSGAEVKGEKETHHDSK 318
+ VGQ I IT + PG D T V+++ +G +V E++ +K
Sbjct: 65 TV-ATVGQTI-ITFDAPGYEDLQFKGSDESDDAKTEAQVQSTAEAGQDVAKEEQAQEPAK 122
Query: 319 -------DVVKVQKGSFTKISPSAKLLILEHGLDASSLQASGPYGTLLKGDVLAAIKSGK 371
D +V PS + E G+D + SG G ++K D+ + + G
Sbjct: 123 ATGAGQQDQAEVDPNKRVIAMPSVRKYAREKGVDIRKVTGSGNNGRVVKEDIDSFVNGG- 181
Query: 372 VSSRISSHTEKTSPSPLPQTSTAVSPGSKSDLELSDSFEDFPNTQ-----IRKVIARRLL 426
+ PQ + A + +FP T+ IRK IA+ ++
Sbjct: 182 ------------AQEAAPQETAAPQETAAKPAAAPAPEGEFPETREKMSGIRKAIAKAMV 229
Query: 427 ESKQNTPHLYLSSDVVLDPLLSFRKELKE---KHNTKVSVNDIVIKAVAVALKNVPEANA 483
SK PH+ L +V + L++ RK+ K+ K++ V+KA+ ALK P N
Sbjct: 230 NSKHTAPHVTLMDEVDVTNLVAHRKQFKQVAADQGIKLTYLPYVVKALTSALKKFPVLNT 289
Query: 484 YWDVEKGEIVLCDAIDISIAVATEKGLMTPIVRNADQKSISAISMEVKELAEKARAGKLA 543
D + E++ +I IA TEKGL+ P+V+NAD+KS+ IS E+ LA KAR GKLA
Sbjct: 290 SIDDKTDEVIQKHYFNIGIAADTEKGLLVPVVKNADRKSVFEISDEINGLATKAREGKLA 349
Query: 544 PHEFQGGTFSISNLGMFPVDQFCAIINPPQAGILAVGRGNQVVEPVIGSDGNETPAVVTK 603
P E +G + +I+N+G F +IN P+ IL +GR + E I DG A V
Sbjct: 350 PAEMKGASCTITNIGSAGGQWFTPVINHPEVAILGIGR---IAEKAIVRDGEIVAAPV-- 404
Query: 604 MNLTLSADHRVFEG 617
+ L+LS DHR+ +G
Sbjct: 405 LALSLSFDHRMIDG 418
Score = 47.0 bits (110), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 78/142 (54%), Gaps = 14/142 (9%)
Query: 91 MPALSPTMSQGNIAKWRKKEGDKIEIGDILCEIETDKATVEFESLEEGFLAKILVPEGSK 150
+P + + +G I KW K D+++ D+L E++ DKA VE S +G + ++ V EG+
Sbjct: 7 LPDIGEGIHEGEIVKWFVKPNDEVDEDDVLAEVQNDKAVVEIPSPVKGKVLELKVEEGTV 66
Query: 151 DVPVGQPIAITVE--DADDIQHIPATIAGGA--EAKEQSSTH--QDV-KKEAVQE----T 199
VGQ I IT + +D+Q + + A EA+ QS+ QDV K+E QE T
Sbjct: 67 -ATVGQTI-ITFDAPGYEDLQFKGSDESDDAKTEAQVQSTAEAGQDVAKEEQAQEPAKAT 124
Query: 200 SASRINTSELPP-RVVLEMPAL 220
A + + +E+ P + V+ MP++
Sbjct: 125 GAGQQDQAEVDPNKRVIAMPSV 146
>sp|P16263|ODO2_BACSU Dihydrolipoyllysine-residue succinyltransferase component of
2-oxoglutarate dehydrogenase complex OS=Bacillus
subtilis (strain 168) GN=odhB PE=3 SV=2
Length = 417
Score = 164 bits (416), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 130/414 (31%), Positives = 203/414 (49%), Gaps = 33/414 (7%)
Query: 215 LEMPALSPTMNQGNIAKWRKNEGDKIEVGDVICEIETDKATLEFECLEEGYLAKILAPEG 274
+++P L+ ++++G IA+W K GD +E G+ + E+ETDK +E E G L ++L G
Sbjct: 4 IKVPELAESISEGTIAQWLKQPGDYVEQGEYLLELETDKVNVELTAEESGVLQEVLKDSG 63
Query: 275 SKDVAVGQPIAITVEDPGDVGTV--KNSVTSGAEVKGEKETHHDSKDV---VKVQKGSFT 329
V VG+ I E G+ S VK EK+ +++V + + S T
Sbjct: 64 DT-VQVGEIIGTISEGAGESSAPAPTEKTESKESVKEEKQAEPAAQEVSEEAQSEAKSRT 122
Query: 330 KISPSAKLLILEHGLDASSLQASGPYGTLLKGDVLAAIKSGKVSSRISSHTEKTSPSPLP 389
SPSA+ L E G+D S + P G + K DV A K S
Sbjct: 123 IASPSARKLAREKGIDLSQVPTGDPLGRVRKQDVEAYEKPA---------------SKPA 167
Query: 390 QTSTAVSPGSKSDLELSDSFEDFPNTQIRKVIARRLLESKQNTPHLYLSSDVVLDPLLSF 449
K+ E ++ R+ IA+RL+E +Q + L ++V + +++
Sbjct: 168 PQQKQQPQAQKAQQSFDKPVEVQKMSRRRQTIAKRLVEVQQTSAMLTTFNEVDMTAVMNL 227
Query: 450 RKELK----EKHNTKVSVNDIVIKAVAVALKNVPEANAYWDVEKGEIVLCDAIDISIAVA 505
RK K E++ K+ KAV ALK P NA +++ E+++ DI IAVA
Sbjct: 228 RKRRKDQFFEQNEVKLGFMSFFTKAVVAALKKYPLLNA--EIQGDELIVKKFYDIGIAVA 285
Query: 506 TEKGLMTPIVRNADQKSISAISMEVKELAEKARAGKLAPHEFQGGTFSISNLGMFPVDQF 565
++GL+ P+VR+AD+ + + I E+ ELA+KAR KL E QGG+F+I+N G F
Sbjct: 286 ADEGLVVPVVRDADRLTFAGIEKEIGELAKKARNNKLTLSELQGGSFTITNGGTFGSLMS 345
Query: 566 CAIINPPQAGILAVGRGNQVVEPV-IGSDGNETPAVVTKMNLTLSADHRVFEGK 618
I+N PQ GIL + + + PV I + E + M + LS DHR+ +GK
Sbjct: 346 TPILNSPQVGILGMHKIQ--LRPVAIDEERFENRPM---MYIALSYDHRIVDGK 394
Score = 57.0 bits (136), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 63/117 (53%), Gaps = 9/117 (7%)
Query: 89 VGMPALSPTMSQGNIAKWRKKEGDKIEIGDILCEIETDKATVEFESLEEGFLAKILVPEG 148
+ +P L+ ++S+G IA+W K+ GD +E G+ L E+ETDK VE + E G L ++L G
Sbjct: 4 IKVPELAESISEGTIAQWLKQPGDYVEQGEYLLELETDKVNVELTAEESGVLQEVLKDSG 63
Query: 149 SKDVPVGQPIAITVEDADDIQHIPATIAGGAEAKEQSSTHQDVKKEAVQETSASRIN 205
V VG+ I E A + PA E++ + + VK+E E +A ++
Sbjct: 64 DT-VQVGEIIGTISEGAGE-SSAPAPT-------EKTESKESVKEEKQAEPAAQEVS 111
>sp|Q6FYD4|ODO2_BARQU Dihydrolipoyllysine-residue succinyltransferase component of
2-oxoglutarate dehydrogenase complex OS=Bartonella
quintana (strain Toulouse) GN=sucB PE=3 SV=1
Length = 410
Score = 164 bits (416), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 133/419 (31%), Positives = 207/419 (49%), Gaps = 51/419 (12%)
Query: 215 LEMPALSPTMNQGNIAKWRKNEGDKIEVGDVICEIETDKATLEFECLEEGYLAKILAPEG 274
+ +P L ++ + I KW K G+ + V + + E+ETDK T+E G L +I+A EG
Sbjct: 5 IRVPTLGESVTEATIGKWFKKLGEAVAVDEPLVELETDKVTVEVPSPVMGKLTEIIAKEG 64
Query: 275 SKDVAVGQPIAITVEDPGDVGTVKN---SVTSGAEVKGEKETHHDSKDVVKVQKGSFTKI 331
D+ + VE G G ++ S TS E E E S G+
Sbjct: 65 --DIVEVNAVLGFVES-GAAGISQSFSPSATSIPEAPSELEQSPSSS---ATPSGTMPP- 117
Query: 332 SPSAKLLILEHGLDASSLQASGPYGTLLKGDVLAAIKSGKVSSRISSHTEKTSPSPLPQT 391
+PSA L+ E+ + S + SG G +LK DVL A+ G +S TS + L +
Sbjct: 118 APSAAKLMAENNIAKSDISGSGKRGQILKEDVLGALAQGTKAS--------TSVATLTAS 169
Query: 392 STAVSPGSKSDLELSDSFEDFPNTQIRKVIARRLLESKQNTPHLYLSSDVVLDPLLSFRK 451
S++ +P E+ + E T++R+ IARRL +++ L ++V + ++ RK
Sbjct: 170 SSSAAPIQ----EMRE--ERVRMTKLRQTIARRLKDAQNTAAMLTTFNEVDMSAVMDLRK 223
Query: 452 ELKE----KHNTKVSVNDIVIKAVAVALKNVPEANAYWDVEKGEIVLCDAIDISIAVATE 507
K+ KH K+ KAV ALK P NA +++ +IV + ++ IAV T+
Sbjct: 224 RYKDLFEKKHGVKLGFMGFFTKAVCHALKEFPTVNA--EIDGTDIVYKNYVNAGIAVGTD 281
Query: 508 KGLMTPIVRNADQKSISAISMEVKELAEKARAGKLAPHEFQGGTFSISNLGMFPVDQFCA 567
KGL+ P+VR+ADQ S++ I E+ L AR GKLA + QGGTF+I+N G++
Sbjct: 282 KGLVVPVVRDADQMSLAEIEKEISRLGRLARDGKLAVSDMQGGTFTITNGGVYGSLMSTP 341
Query: 568 IINPPQAGIL--------AVGRGNQVVEPVIGSDGNETPAVVTKMNLTLSADHRVFEGK 618
I+N PQ+GIL A+ G Q++ + M L LS DHR+ +G+
Sbjct: 342 ILNAPQSGILGMHAIKERAMVVGGQII-------------ICPMMYLALSYDHRIVDGQ 387
Score = 48.1 bits (113), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 67/150 (44%), Gaps = 25/150 (16%)
Query: 87 TVVGMPALSPTMSQGNIAKWRKKEGDKIEIGDILCEIETDKATVEFESLEEGFLAKILVP 146
T + +P L ++++ I KW KK G+ + + + L E+ETDK TVE S G L +I+
Sbjct: 3 TGIRVPTLGESVTEATIGKWFKKLGEAVAVDEPLVELETDKVTVEVPSPVMGKLTEIIAK 62
Query: 147 EGSKDVPVGQPIAITVEDADDIQHIPATIAGGAEAKEQS-----STHQDVKKEAVQETSA 201
EG D ++ + + GA QS ++ + E Q S+
Sbjct: 63 EG---------------DIVEVNAVLGFVESGAAGISQSFSPSATSIPEAPSELEQSPSS 107
Query: 202 SRINTSELPPRVVLEMPALSPTMNQGNIAK 231
S + +PP P+ + M + NIAK
Sbjct: 108 SATPSGTMPP-----APSAAKLMAENNIAK 132
>sp|Q89AJ6|ODO2_BUCBP Dihydrolipoyllysine-residue succinyltransferase component of
2-oxoglutarate dehydrogenase complex OS=Buchnera
aphidicola subsp. Baizongia pistaciae (strain Bp)
GN=sucB PE=3 SV=1
Length = 410
Score = 163 bits (413), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 125/407 (30%), Positives = 211/407 (51%), Gaps = 32/407 (7%)
Query: 217 MPALSPTMNQGNIAKWRKNEGDKIEVGDVICEIETDKATLEFECLEEGYLAKILAPEGSK 276
+P L ++ I KW K +GDK++ ++ +IETDK LE +G L I+A +G K
Sbjct: 8 IPDLPESVTDATIIKWHKKKGDKVQEDTILVDIETDKVILEIPSPSDGILNSIIADKG-K 66
Query: 277 DVAVGQPIAITVEDPGDVGTVKNSVTSGAEVKGEKETHHDSKDVVKVQKGSFTKISPSAK 336
V GQ I ++ +G +KN T ++ +K+ + ++ SP+ +
Sbjct: 67 IVLPGQVIGTLLK----IG-IKNEEKIIKTTNNVVNTDNNQNINLKLLEKTY---SPTVR 118
Query: 337 LLILEHGL-DASSLQASGPYGTLLKGDVLAAIKSGKVSSRISSHTEKTSPSPLPQTSTAV 395
LI H L D +Q +G L + D+L +K+ + S+ +K + L +
Sbjct: 119 RLISMHDLRDVDIIQGTGTKNRLTRKDILNYLKNIR-----SNTNKKINNYDLNAYNFNT 173
Query: 396 SPGSKSDLELSDSFEDFPNTQIRKVIARRLLESKQNTPHLYLSSDVVLDPLLSFRKE--- 452
+ + S + T++RK I+ RLL +K NT L ++V + +L+ R++
Sbjct: 174 THKNHR------SIKRVKMTRLRKKISERLLSTKNNTASLTTFNEVNMQSILNLRRKYGE 227
Query: 453 -LKEKHNTKVSVNDIVIKAVAVALKNVPEANAYWDVEKGEIVLCDAIDISIAVATEKGLM 511
K+KH K+ + +KAV ALK PE NA ++ EI+ + DISIA++T +GL+
Sbjct: 228 LFKQKHGIKLGLMSFYVKAVIEALKIFPEINA--SIDNDEIIYYNYFDISIAISTPRGLV 285
Query: 512 TPIVRNADQKSISAISMEVKELAEKARAGKLAPHEFQGGTFSISNLGMFPVDQFCAIINP 571
TP+++NAD S++ I +++K+ +EK + KL + GG F+I+N G+F +INP
Sbjct: 286 TPVLKNADLMSMAEIEIKIKDFSEKGKNSKLTIDDLIGGNFTITNGGVFGSLFSTPLINP 345
Query: 572 PQAGILAVGRGNQVVEPVIGSDGNETPAVVTKMNLTLSADHRVFEGK 618
PQ+ IL + ++ PVI + E + M L LS DHR+ +GK
Sbjct: 346 PQSAILGMHAIHK--RPVIVDENIEVHPM---MYLALSYDHRLIDGK 387
Score = 50.1 bits (118), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 41/71 (57%), Gaps = 1/71 (1%)
Query: 89 VGMPALSPTMSQGNIAKWRKKEGDKIEIGDILCEIETDKATVEFESLEEGFLAKILVPEG 148
+ +P L +++ I KW KK+GDK++ IL +IETDK +E S +G L I+ +G
Sbjct: 6 IFIPDLPESVTDATIIKWHKKKGDKVQEDTILVDIETDKVILEIPSPSDGILNSIIADKG 65
Query: 149 SKDVPVGQPIA 159
+P GQ I
Sbjct: 66 KIVLP-GQVIG 75
>sp|P11961|ODP2_GEOSE Dihydrolipoyllysine-residue acetyltransferase component of pyruvate
dehydrogenase complex OS=Geobacillus stearothermophilus
GN=pdhC PE=1 SV=3
Length = 428
Score = 160 bits (406), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 125/422 (29%), Positives = 211/422 (50%), Gaps = 41/422 (9%)
Query: 215 LEMPALSPTMNQGNIAKWRKNEGDKIEVGDVICEIETDKATLEFECLEEGYLAKILAPEG 274
++P + +++G I KW GD++ DV+CE++ DKA +E +G + +IL PEG
Sbjct: 5 FKLPDIGEGIHEGEIVKWFVKPGDEVNEDDVLCEVQNDKAVVEIPSPVKGKVLEILVPEG 64
Query: 275 SKDVAVGQPIAITVEDPGDVGTVKNSVTSGAEV-------------KGEK-ETHHDSKDV 320
+ VGQ + IT++ PG +N G E K EK + +
Sbjct: 65 TV-ATVGQTL-ITLDAPG----YENMTFKGQEQEEAKKEEKTETVSKEEKVDAVAPNAPA 118
Query: 321 VKVQKGSFTKI--SPSAKLLILEHGLDASSLQASGPYGTLLKGDVLAAIKSGKVSSRISS 378
+ + G ++ PS + E G+D +Q +G G +LK D+ A + G + ++
Sbjct: 119 AEAEAGPNRRVIAMPSVRKYAREKGVDIRLVQGTGKNGRVLKEDIDAFLAGGAKPAPAAA 178
Query: 379 HTEKTSPSPLPQTSTAVSPGSKSDLELSDSFEDFPNTQIRKVIARRLLESKQNTPHLYLS 438
+ + P T+ P ++ + + IR+ IA+ ++ SK PH+ L
Sbjct: 179 EEKAAPAAAKPATTEGEFPETREKM-----------SGIRRAIAKAMVHSKHTAPHVTLM 227
Query: 439 SDVVLDPLLSFRKELKE---KHNTKVSVNDIVIKAVAVALKNVPEANAYWDVEKGEIVLC 495
+ + L++ RK+ K + K++ V+KA+ AL+ P N D E EI+
Sbjct: 228 DEADVTKLVAHRKKFKAIAAEKGIKLTFLPYVVKALVSALREYPVLNTSIDDETEEIIQK 287
Query: 496 DAIDISIAVATEKGLMTPIVRNADQKSISAISMEVKELAEKARAGKLAPHEFQGGTFSIS 555
+I IA T++GL+ P++++AD+K I A++ E+ ELAEKAR GKL P E +G + +I+
Sbjct: 288 HYYNIGIAADTDRGLLVPVIKHADRKPIFALAQEINELAEKARDGKLTPGEMKGASCTIT 347
Query: 556 NLGMFPVDQFCAIINPPQAGILAVGRGNQVVEPVIGSDGNETPAVVTKMNLTLSADHRVF 615
N+G F +IN P+ IL +GR + E I DG A + + L+LS DHR+
Sbjct: 348 NIGSAGGQWFTPVINHPEVAILGIGR---IAEKPIVRDGEIVAAPM--LALSLSFDHRMI 402
Query: 616 EG 617
+G
Sbjct: 403 DG 404
Score = 54.7 bits (130), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 38/59 (64%)
Query: 91 MPALSPTMSQGNIAKWRKKEGDKIEIGDILCEIETDKATVEFESLEEGFLAKILVPEGS 149
+P + + +G I KW K GD++ D+LCE++ DKA VE S +G + +ILVPEG+
Sbjct: 7 LPDIGEGIHEGEIVKWFVKPGDEVNEDDVLCEVQNDKAVVEIPSPVKGKVLEILVPEGT 65
>sp|P57389|ODO2_BUCAI Dihydrolipoyllysine-residue succinyltransferase component of
2-oxoglutarate dehydrogenase complex OS=Buchnera
aphidicola subsp. Acyrthosiphon pisum (strain APS)
GN=sucB PE=3 SV=1
Length = 420
Score = 157 bits (398), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 124/422 (29%), Positives = 201/422 (47%), Gaps = 42/422 (9%)
Query: 212 RVVLEMPALSPTMNQGNIAKWRKNEGDKIEVGDVICEIETDKATLEFECLEEGYLAKILA 271
++ + +P L +++ + KW K GD + D I +IETDK LE +G L IL
Sbjct: 3 KINILVPDLPESISDATVVKWHKKIGDTVHCDDNIVDIETDKVMLEVSSPCDGILQSILE 62
Query: 272 PEGSKDVAVGQPIAITVEDPGDVGTVKNSVTSGAEVKGE-----KE----THHDSKDVVK 322
EG V + Q T+ + V N +++ ++ E KE T + K++
Sbjct: 63 KEGK--VVISQQ---TLGEINKSTVVDNHLSNNHIIEKEDNLLKKEEKYITTEEKKEIEY 117
Query: 323 VQKGSFTKISPSAKLLILEHGLDASSLQASGPYGTLLKGDVLAAIKSGKVSSRISSHTEK 382
+ K + ++PS + + H ++ L V+ K + I EK
Sbjct: 118 LLKDNHKHLTPSMRRSVKIHNINNGFL-----------NQVIETSKKTNFENIIKE--EK 164
Query: 383 TSPSPLPQTSTAVSPGSKSDLELSDSFEDFPNTQIRKVIARRLLESKQNTPHLYLSSDVV 442
+ + + + + T++R+ IA RLL+SK NT L +V
Sbjct: 165 KESNQILFNHNIFNANENNKNNNNKVTNRVKMTRLRQRIAERLLDSKNNTAMLTTFHEVN 224
Query: 443 LDPLLSFRK----ELKEKHNTKVSVNDIVIKAVAVALKNVPEANAYWDVEKGEIVLCDAI 498
+ P++ RK + ++KHN ++ +KAV ALKN PE NAY D + +IV
Sbjct: 225 MKPIILLRKKYGEDFEKKHNVRIGFMSFFVKAVIQALKNFPEINAYID--QTDIVFYKNF 282
Query: 499 DISIAVATEKGLMTPIVRNADQKSISAISMEVKELAEKARAGKLAPHEFQGGTFSISNLG 558
DISIA++T +GL+TP++RNAD +++ I ++K+ + K K+ E GG F+I+N G
Sbjct: 283 DISIAISTPRGLITPVIRNADTMTMAEIEKKIKDFSIKGLQNKINIKELMGGNFTITNGG 342
Query: 559 MFPVDQFCAIINPPQAGILAVGRGNQVVE--PVIGSDGNETPAVVTKMNLTLSADHRVFE 616
+F IINPPQ IL G V++ PV+ N ++ M L LS DHR+ +
Sbjct: 343 VFGSLMSTPIINPPQTAIL----GMHVIQERPVV---VNGQIKILPMMYLALSYDHRLID 395
Query: 617 GK 618
GK
Sbjct: 396 GK 397
Score = 45.4 bits (106), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 32/58 (55%)
Query: 91 MPALSPTMSQGNIAKWRKKEGDKIEIGDILCEIETDKATVEFESLEEGFLAKILVPEG 148
+P L ++S + KW KK GD + D + +IETDK +E S +G L IL EG
Sbjct: 8 VPDLPESISDATVVKWHKKIGDTVHCDDNIVDIETDKVMLEVSSPCDGILQSILEKEG 65
>sp|Q5HPC7|ODO2_STAEQ Dihydrolipoyllysine-residue succinyltransferase component of
2-oxoglutarate dehydrogenase complex OS=Staphylococcus
epidermidis (strain ATCC 35984 / RP62A) GN=odhB PE=3
SV=1
Length = 420
Score = 156 bits (395), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 136/419 (32%), Positives = 213/419 (50%), Gaps = 40/419 (9%)
Query: 215 LEMPALSPTMNQGNIAKWRKNEGDKIEVGDVICEIETDKATLEFECLEEGYLAKILAPEG 274
+++P L+ ++ +G IA+W KN GD ++ G+ I E+ETDK +E E G L++ LA EG
Sbjct: 4 VKVPELAESITEGTIAEWLKNVGDNVDKGEAILELETDKVNVEVVSEEAGVLSEQLAEEG 63
Query: 275 SKDVAVGQPIAITVEDPGDVGTVKNSV--TSGAEVKGEKET----HHDSKDVVKVQKGSF 328
V VGQ +A+ E G V T +S +S + EKET + +S + Q S
Sbjct: 64 DT-VEVGQAVAVVGE--GQVNTSNDSSNESSQKDEAKEKETPKQSNPNSSESENTQDNSQ 120
Query: 329 TKI--SPSAKLLILEHGLDASSLQASGPYGTLLKGDVLAAIKSGKVSSRISSHTEKTSPS 386
+I +PSA+ ++G+D S + G L K DV + KS SS+ + K+ S
Sbjct: 121 QRINATPSARRHARKNGVDLSEVSGKG-NDVLRKDDVENSQKS---SSQTAKSESKSQNS 176
Query: 387 PLPQTSTAVS-PGSKSDLELSDSFEDFPNTQIRKVIARRLLESKQNTPHLYLSSDVVLDP 445
QT+ S P + + ++ +K A++LLE T L ++V +
Sbjct: 177 GSKQTNNNPSKPVIREKM-----------SRRKKTAAKKLLEVSNQTAMLTTFNEVDMTN 225
Query: 446 LLSFRKELKEK----HN-TKVSVNDIVIKAVAVALKNVPEANAYWDVEKGEIVLCDAIDI 500
++ RK KE+ H+ TK+ KA ALK PE NA +++ +++ DI
Sbjct: 226 VMDLRKRKKEQFIKDHDGTKLGFMSFFTKAAVAALKKYPEVNA--EIDGDDMITKQFYDI 283
Query: 501 SIAVATEKGLMTPIVRNADQKSISAISMEVKELAEKARAGKLAPHEFQGGTFSISNLGMF 560
IAV+T+ GL+ P VR+ D+K+ + I E+ LA KAR KL + G+F+I+N G+F
Sbjct: 284 GIAVSTDDGLLVPFVRDCDKKNFAEIEQEIANLAVKARDKKLGLDDMVNGSFTITNGGIF 343
Query: 561 PVDQFCAIINPPQAGILAVGRGNQVVEPV-IGSDGNETPAVVTKMNLTLSADHRVFEGK 618
IIN QA IL G + + P+ + D E + M + LS DHR+ +GK
Sbjct: 344 GSMMSTPIINGNQAAIL--GMHSIITRPIAVDKDTIENRPM---MYIALSYDHRIIDGK 397
Score = 60.8 bits (146), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 67/124 (54%), Gaps = 6/124 (4%)
Query: 89 VGMPALSPTMSQGNIAKWRKKEGDKIEIGDILCEIETDKATVEFESLEEGFLAKILVPEG 148
V +P L+ ++++G IA+W K GD ++ G+ + E+ETDK VE S E G L++ L EG
Sbjct: 4 VKVPELAESITEGTIAEWLKNVGDNVDKGEAILELETDKVNVEVVSEEAGVLSEQLAEEG 63
Query: 149 SKDVPVGQPIAITVEDADDIQHIPATIAGGA-EAKEQSSTHQ----DVKKEAVQETSASR 203
V VGQ +A+ E + + + + EAKE+ + Q + E Q+ S R
Sbjct: 64 DT-VEVGQAVAVVGEGQVNTSNDSSNESSQKDEAKEKETPKQSNPNSSESENTQDNSQQR 122
Query: 204 INTS 207
IN +
Sbjct: 123 INAT 126
>sp|Q8CSL9|ODO2_STAES Dihydrolipoyllysine-residue succinyltransferase component of
2-oxoglutarate dehydrogenase complex OS=Staphylococcus
epidermidis (strain ATCC 12228) GN=odhB PE=3 SV=1
Length = 420
Score = 155 bits (391), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 135/419 (32%), Positives = 213/419 (50%), Gaps = 40/419 (9%)
Query: 215 LEMPALSPTMNQGNIAKWRKNEGDKIEVGDVICEIETDKATLEFECLEEGYLAKILAPEG 274
+++P L+ ++ +G IA+W KN GD ++ G+ I E+ETDK +E E G L++ LA EG
Sbjct: 4 VKVPELAESITEGTIAEWLKNVGDNVDKGEAILELETDKVNVEVVSEEAGVLSEQLAEEG 63
Query: 275 SKDVAVGQPIAITVEDPGDVGTVKNSV--TSGAEVKGEKET----HHDSKDVVKVQKGSF 328
V VGQ +A+ E G V T +S +S + EKET + +S + Q S
Sbjct: 64 DT-VEVGQAVAVVGE--GQVNTSNDSSNESSQKDEAKEKETPKQSNPNSSESENTQDNSQ 120
Query: 329 TKI--SPSAKLLILEHGLDASSLQASGPYGTLLKGDVLAAIKSGKVSSRISSHTEKTSPS 386
+I +PSA+ ++G+D S + G L K DV + KS SS+ + K+ S
Sbjct: 121 QRINATPSARRHARKNGVDLSEVSGKG-NDVLRKDDVENSQKS---SSQTAKSESKSQNS 176
Query: 387 PLPQTSTAVS-PGSKSDLELSDSFEDFPNTQIRKVIARRLLESKQNTPHLYLSSDVVLDP 445
Q++ S P + + ++ +K A++LLE T L ++V +
Sbjct: 177 GSKQSNNNPSKPVIREKM-----------SRRKKTAAKKLLEVSNQTAMLTTFNEVDMTN 225
Query: 446 LLSFRKELKEK----HN-TKVSVNDIVIKAVAVALKNVPEANAYWDVEKGEIVLCDAIDI 500
++ RK KE+ H+ TK+ KA ALK PE NA +++ +++ DI
Sbjct: 226 VMDLRKRKKEQFIKDHDGTKLGFMSFFTKAAVAALKKYPEVNA--EIDGDDMITKQFYDI 283
Query: 501 SIAVATEKGLMTPIVRNADQKSISAISMEVKELAEKARAGKLAPHEFQGGTFSISNLGMF 560
IAV+T+ GL+ P VR+ D+K+ + I E+ LA KAR KL + G+F+I+N G+F
Sbjct: 284 GIAVSTDDGLLVPFVRDCDKKNFAEIEQEIANLAVKARDKKLGLDDMVNGSFTITNGGIF 343
Query: 561 PVDQFCAIINPPQAGILAVGRGNQVVEPV-IGSDGNETPAVVTKMNLTLSADHRVFEGK 618
IIN QA IL G + + P+ + D E + M + LS DHR+ +GK
Sbjct: 344 GSMMSTPIINGNQAAIL--GMHSIITRPIAVDKDTIENRPM---MYIALSYDHRIIDGK 397
Score = 60.8 bits (146), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 67/124 (54%), Gaps = 6/124 (4%)
Query: 89 VGMPALSPTMSQGNIAKWRKKEGDKIEIGDILCEIETDKATVEFESLEEGFLAKILVPEG 148
V +P L+ ++++G IA+W K GD ++ G+ + E+ETDK VE S E G L++ L EG
Sbjct: 4 VKVPELAESITEGTIAEWLKNVGDNVDKGEAILELETDKVNVEVVSEEAGVLSEQLAEEG 63
Query: 149 SKDVPVGQPIAITVEDADDIQHIPATIAGGA-EAKEQSSTHQ----DVKKEAVQETSASR 203
V VGQ +A+ E + + + + EAKE+ + Q + E Q+ S R
Sbjct: 64 DT-VEVGQAVAVVGEGQVNTSNDSSNESSQKDEAKEKETPKQSNPNSSESENTQDNSQQR 122
Query: 204 INTS 207
IN +
Sbjct: 123 INAT 126
>sp|Q8GCY1|ODO2_BARVB Dihydrolipoyllysine-residue succinyltransferase component of
2-oxoglutarate dehydrogenase complex OS=Bartonella
vinsonii subsp. berkhofii GN=sucB PE=3 SV=1
Length = 411
Score = 154 bits (389), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 124/410 (30%), Positives = 203/410 (49%), Gaps = 32/410 (7%)
Query: 215 LEMPALSPTMNQGNIAKWRKNEGDKIEVGDVICEIETDKATLEFECLEEGYLAKILAPEG 274
+ +P L ++ + + KW K G+ + + + + E+ETDK T+E G L +I+A EG
Sbjct: 5 IRVPTLGESVTEATVGKWFKKLGEAVAIDEPLVELETDKVTVEVPSPVAGKLFEIIAKEG 64
Query: 275 SKDVAVGQPIAITVEDPGDVGTVKNSVTSGAEVKGEKETHHDSKDVVKVQKGSFTKI--S 332
TVE +G V+ S A+ ET + Q S + +
Sbjct: 65 D-----------TVEVNALLGAVEAGAASVAKSPSSSETSVSAAPSELEQSSSSNTMPPA 113
Query: 333 PSAKLLILEHGLDASSLQASGPYGTLLKGDVLAAIKSGKVSSRISSHTEKTSPSPLPQTS 392
PSA L+ E+ + S + SG G +LK DVL + G +S + ++P + ++
Sbjct: 114 PSAAKLMAENNIAKSDILGSGKRGQILKEDVLNVLAQGVKTSPPAVSASSSTPVSVSSSA 173
Query: 393 TAVSPGSKSDLELSDSFEDFPNTQIRKVIARRLLESKQNTPHLYLSSDVVLDPLLSFRKE 452
A + E T++R+ IARRL +++ L ++V + ++ RK
Sbjct: 174 VAPVQEMRE--------ERVRMTKLRQTIARRLKDAQNTAAMLTTFNEVDMSAVMGLRKR 225
Query: 453 LKE----KHNTKVSVNDIVIKAVAVALKNVPEANAYWDVEKGEIVLCDAIDISIAVATEK 508
K+ KH K+ KAV ALK +P NA +++ +I+ + ++ IAV T+K
Sbjct: 226 YKDLFEKKHGVKLGFMGFFTKAVCHALKELPAVNA--EIDGTDIIYKNYVNAGIAVGTDK 283
Query: 509 GLMTPIVRNADQKSISAISMEVKELAEKARAGKLAPHEFQGGTFSISNLGMFPVDQFCAI 568
GL+ P+VR+ADQ S++ I E+ L AR GKLA + QGGTF+I+N G++ I
Sbjct: 284 GLVVPVVRDADQMSLAEIEKEIGRLGRLARDGKLAVSDMQGGTFTITNGGVYGSLMSTPI 343
Query: 569 INPPQAGILAVGRGNQVVEPVIGSDGNETPAVVTKMNLTLSADHRVFEGK 618
+N PQ+GIL + + + E + DG A+ M L LS DHR+ +G+
Sbjct: 344 LNAPQSGILGM---HAIKERAMVVDGQ--IAIRPMMYLALSYDHRIVDGQ 388
Score = 45.8 bits (107), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 37/62 (59%)
Query: 87 TVVGMPALSPTMSQGNIAKWRKKEGDKIEIGDILCEIETDKATVEFESLEEGFLAKILVP 146
T + +P L ++++ + KW KK G+ + I + L E+ETDK TVE S G L +I+
Sbjct: 3 TEIRVPTLGESVTEATVGKWFKKLGEAVAIDEPLVELETDKVTVEVPSPVAGKLFEIIAK 62
Query: 147 EG 148
EG
Sbjct: 63 EG 64
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.312 0.129 0.356
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 227,853,693
Number of Sequences: 539616
Number of extensions: 10041152
Number of successful extensions: 27013
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 126
Number of HSP's successfully gapped in prelim test: 76
Number of HSP's that attempted gapping in prelim test: 26253
Number of HSP's gapped (non-prelim): 441
length of query: 622
length of database: 191,569,459
effective HSP length: 124
effective length of query: 498
effective length of database: 124,657,075
effective search space: 62079223350
effective search space used: 62079223350
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 64 (29.3 bits)