BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 006997
(622 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|356561794|ref|XP_003549163.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19191,
mitochondrial-like [Glycine max]
Length = 615
Score = 761 bits (1966), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 363/599 (60%), Positives = 461/599 (76%), Gaps = 9/599 (1%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MIR+STNNG F +TL+ YSSM +GVHGN+ T+PL+LKACAN+ SI G +H HVLK+G
Sbjct: 17 MIRDSTNNGFFTQTLNIYSSMAHSGVHGNNLTYPLLLKACANLPSIQHGTMLHGHVLKLG 76
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
FQ D FVQT L+DMYSKCS S+R+V DEMP R SVVSWN+++SA+SR D+A+ +
Sbjct: 77 FQADTFVQTALVDMYSKCSHVASARQVFDEMPQR--SVVSWNAMVSAYSRRSSMDQALSL 134
Query: 121 LKEMWVLGLELSASTFVSVVSGCSFRQ-------GISMHCCVYKLGLLNNEIPLANSVMS 173
LKEMWVLG E +ASTFVS++SG S G S+HCC+ KLG++ E+ LANS+M
Sbjct: 135 LKEMWVLGFEPTASTFVSILSGYSNLDSFEFHLLGKSIHCCLIKLGIVYLEVSLANSLMG 194
Query: 174 MYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVV 233
MY +F ++EAR +FD + E SI+SWTT+IGGYV +G+ EA+GL QM+ SV D VV
Sbjct: 195 MYVQFCLMDEARKVFDLMDEKSIISWTTMIGGYVKIGHAVEAYGLFYQMQHQSVGIDFVV 254
Query: 234 FLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVL 293
FLNLI GC QV +L LA S+HSL+LK G N +DP++NLL++MY KCG+L ARR+FD ++
Sbjct: 255 FLNLISGCIQVRDLLLASSVHSLVLKCGCNEKDPVENLLITMYAKCGNLTSARRIFDLII 314
Query: 294 EKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKE 353
EKS+ WTSMI GY LG+P EA++LF+R+++T +RPN ATLAT +SACA+LGSLS G+E
Sbjct: 315 EKSMLSWTSMIAGYVHLGHPGEALDLFRRMIRTDIRPNGATLATVVSACADLGSLSIGQE 374
Query: 354 IEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGM 413
IEEYI LNGLES++QVQTSLIHM+SKCG I KA+EVFERV DKDL VW++MIN YAIHGM
Sbjct: 375 IEEYIFLNGLESDQQVQTSLIHMYSKCGSIVKAREVFERVTDKDLTVWTSMINSYAIHGM 434
Query: 414 GDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHY 473
G++A++LF+KM EG+ PDA+VYTS+ ACSHSG+V++GL +FKSMQ +FGI P++EH
Sbjct: 435 GNEAISLFHKMTTAEGIMPDAIVYTSVFLACSHSGLVEEGLKYFKSMQKDFGITPTVEHC 494
Query: 474 LCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNP 533
CL+DLLGR G+ DLAL I MP +VQAQVW PLLSAC H NVELGE A LL +P
Sbjct: 495 TCLIDLLGRVGQLDLALNAIQGMPPDVQAQVWGPLLSACRIHGNVELGELATVRLLDSSP 554
Query: 534 GSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSH 592
GS+G+Y+LMANL+TS G WKEA R MD + L KE GWSQVE+ + F G++S
Sbjct: 555 GSSGSYVLMANLYTSLGKWKEAHMMRNSMDGKGLVKESGWSQVEVTDTYHTFAVGNQSQ 613
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 68/254 (26%), Positives = 128/254 (50%), Gaps = 5/254 (1%)
Query: 195 SIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMH 254
S+ +W +I N G + + + M V + + + L+ CA + ++ +H
Sbjct: 10 SLYTWNLMIRDSTNNGFFTQTLNIYSSMAHSGVHGNNLTYPLLLKACANLPSIQHGTMLH 69
Query: 255 SLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPS 314
+LK G+ + + LV MY+KC + AR+VFD + ++SV W +M+ Y++
Sbjct: 70 GHVLKLGFQADTFVQTALVDMYSKCSHVASARQVFDEMPQRSVVSWNAMVSAYSRRSSMD 129
Query: 315 EAVNLFKRLLKTSVRPNEATLATTLSACAELGSLS---KGKEIEEYIVLNGLES-NRQVQ 370
+A++L K + P +T + LS + L S GK I ++ G+ +
Sbjct: 130 QALSLLKEMWVLGFEPTASTFVSILSGYSNLDSFEFHLLGKSIHCCLIKLGIVYLEVSLA 189
Query: 371 TSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGL 430
SL+ M+ + +++A++VF+ + +K + W+ MI GY G +A LFY+MQH + +
Sbjct: 190 NSLMGMYVQFCLMDEARKVFDLMDEKSIISWTTMIGGYVKIGHAVEAYGLFYQMQH-QSV 248
Query: 431 KPDAVVYTSILSAC 444
D VV+ +++S C
Sbjct: 249 GIDFVVFLNLISGC 262
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 86/154 (55%), Gaps = 1/154 (0%)
Query: 293 LEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGK 352
+S++ W MI G+ ++ +N++ + + V N T L ACA L S+ G
Sbjct: 7 FRRSLYTWNLMIRDSTNNGFFTQTLNIYSSMAHSGVHGNNLTYPLLLKACANLPSIQHGT 66
Query: 353 EIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHG 412
+ +++ G +++ VQT+L+ M+SKC + A++VF+ +P + + W+AM++ Y+
Sbjct: 67 MLHGHVLKLGFQADTFVQTALVDMYSKCSHVASARQVFDEMPQRSVVSWNAMVSAYSRRS 126
Query: 413 MGDQALNLFYKMQHVEGLKPDAVVYTSILSACSH 446
DQAL+L +M V G +P A + SILS S+
Sbjct: 127 SMDQALSLLKEMW-VLGFEPTASTFVSILSGYSN 159
>gi|297737195|emb|CBI26396.3| unnamed protein product [Vitis vinifera]
Length = 667
Score = 759 bits (1961), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 367/609 (60%), Positives = 473/609 (77%), Gaps = 9/609 (1%)
Query: 1 MIRNSTNNGSFEE--TLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLK 58
MI ++ + F++ +LS+++S GVHG+ FTFP VLKACA + S+ D ++HSH+L
Sbjct: 1 MIPSTWKHLIFKQIPSLSSHTS----GVHGSEFTFPFVLKACAKLPSLEDATKLHSHILL 56
Query: 59 VGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAI 118
GFQ FVQT L+D+YSKC F S+R V D+MP++ S+VSWNSIISAH R D++
Sbjct: 57 TGFQAHVFVQTALVDVYSKCCCFHSARLVFDQMPIK--SLVSWNSIISAHCRDFHIDQSF 114
Query: 119 LVLKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKF 178
+LK+M +LGLELS++TF ++ CS QG+S+H + KLGL + +PLANS+MSMY +
Sbjct: 115 GILKQMQLLGLELSSATFTGFLASCSLPQGLSIHGYITKLGL-DLHLPLANSIMSMYIRL 173
Query: 179 GKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLI 238
+++ A S+F + + SIVSWT I+GGY++ G+V + F + NQMR V PD +VF+NLI
Sbjct: 174 NQIDGALSVFYTLHQKSIVSWTIILGGYLSAGDVAKVFAVFNQMRCQCVGPDSIVFVNLI 233
Query: 239 LGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVF 298
C GNL LA+ +HSLLLKSG++++DP+DNLLV+MY KC DL ARRVFDAV EKSVF
Sbjct: 234 SCCKLSGNLLLAMLVHSLLLKSGFDHKDPIDNLLVAMYAKCKDLVSARRVFDAVHEKSVF 293
Query: 299 LWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYI 358
LWTSMI GYAQ GYP+EA++LF LL+T+ RPNE TLAT LSACAE+GSL G+EIE+YI
Sbjct: 294 LWTSMISGYAQFGYPNEALHLFNMLLRTASRPNELTLATVLSACAEMGSLRMGEEIEQYI 353
Query: 359 VLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQAL 418
+LNGL S+ +VQTSLIHMF KCG I KA+ +FER+P+KDLAVWSAMINGYA+HGMG +AL
Sbjct: 354 LLNGLGSDLRVQTSLIHMFCKCGSIKKAQALFERIPNKDLAVWSAMINGYAVHGMGKEAL 413
Query: 419 NLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVD 478
NLF+KMQ+ G+KPDA+VYTS+L ACSHSG+++DGL +F+SMQ +FGIEPSI+HY CLVD
Sbjct: 414 NLFHKMQNEVGIKPDAIVYTSVLLACSHSGLIEDGLKYFRSMQKDFGIEPSIQHYSCLVD 473
Query: 479 LLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGN 538
LLGRAG +LAL+TI EMPV VQA+VWAP LSAC HHN+ELGE+AAKNL L P STGN
Sbjct: 474 LLGRAGYVELALRTIQEMPVLVQARVWAPFLSACYTHHNLELGEFAAKNLFDLEPRSTGN 533
Query: 539 YILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDI 598
++LM NL+TS G WKEAA AR +++ R L KEPGWSQ+EIDG+V V A +SH S+DI
Sbjct: 534 FVLMTNLYTSMGKWKEAAKARSIINARGLVKEPGWSQIEIDGAVHVLAAEGQSHLESIDI 593
Query: 599 RKTLKELHI 607
+ E+ I
Sbjct: 594 HELCPEMRI 602
>gi|449439735|ref|XP_004137641.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g12770-like [Cucumis sativus]
gi|449514868|ref|XP_004164502.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g12770-like [Cucumis sativus]
Length = 601
Score = 606 bits (1563), Expect = e-170, Method: Compositional matrix adjust.
Identities = 308/581 (53%), Positives = 419/581 (72%), Gaps = 10/581 (1%)
Query: 2 IRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGF 61
IR+S N G F ++L TYS M +G+HGN+FTFPL+LKACAN+ SI DG +H+H++ VGF
Sbjct: 25 IRSSVNGGFFAQSLETYSFMRHSGIHGNNFTFPLLLKACANLASIGDGTMLHAHLIHVGF 84
Query: 62 QQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVL 121
+ D FVQT L+DMYSK S+ +SR+V DE R SV+SWNS+I+A+SR+ +EA+ +
Sbjct: 85 ESDVFVQTSLVDMYSKFSNLRASRQVFDETSTR--SVISWNSMIAAYSRSFRVNEALKLF 142
Query: 122 KEMWVLGLELSASTFVSVVSGC------SFRQGISMHCCVYKLGLLNNEIPLANSVMSMY 175
+EM G E ++STFVS++SG S QG +H C+ K L +++ P+ NS++ MY
Sbjct: 143 REMLGGGFEPNSSTFVSLLSGFADPTHGSLFQGRLLHGCLTKFQL-HDDTPVENSLVQMY 201
Query: 176 AKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFL 235
FG+++ A S+F I E +++SWT ++GGY+ G V + F +QMR+ +V D VF+
Sbjct: 202 VNFGQIDSACSVFYAISEKTVISWTIMLGGYLKAGAVAKVFETFSQMRQNNVVLDKFVFV 261
Query: 236 NLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEK 295
++I C Q+GNLFL S+HSLLLK+G EDP+ LL+SMY+KCGDL AR VFD + EK
Sbjct: 262 DIISSCIQLGNLFLGSSLHSLLLKTGLKYEDPIGCLLISMYSKCGDLLSARAVFDLLSEK 321
Query: 296 SVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIE 355
S++ WTSMI GYA GYP EA++LF + +VRPN A LAT +SACA+LGSLS +EIE
Sbjct: 322 SIYSWTSMISGYANAGYPREALSLFSMATQNNVRPNGAMLATAISACADLGSLSMRREIE 381
Query: 356 EYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGD 415
+I +GL S+ QV TSLIH++ K G I KA++VF + +DLA WS+M+NGYA+HGMG+
Sbjct: 382 AFIQQDGLASDSQVSTSLIHLYCKFGSIEKAEKVFNSMIHRDLAAWSSMMNGYAVHGMGE 441
Query: 416 QALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLC 475
+ +NLF++MQ G+KPD VY SIL ACSHSG+V+DGL FK+MQ ++GI P++ HY C
Sbjct: 442 KTMNLFHEMQR-SGIKPDGSVYASILLACSHSGLVEDGLEHFKNMQLDYGIVPTMVHYTC 500
Query: 476 LVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGS 535
LVD+L RAG +LAL TI EMP + Q+Q WAP LSAC + +VELGE A + LL+ NP +
Sbjct: 501 LVDILSRAGHLELALNTIQEMPTQFQSQAWAPFLSACRTYCDVELGEVANRCLLSSNPRN 560
Query: 536 TGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQV 576
N++LMANL+TS G WKEAA R L+DD+ L KEPG SQ+
Sbjct: 561 PVNHVLMANLYTSMGKWKEAAKVRSLIDDKGLVKEPGCSQL 601
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 71/260 (27%), Positives = 125/260 (48%), Gaps = 3/260 (1%)
Query: 191 IGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLA 250
I + + W I VN G ++ + MR + + F L+ CA + ++
Sbjct: 13 ITKKPLYLWNLTIRSSVNGGFFAQSLETYSFMRHSGIHGNNFTFPLLLKACANLASIGDG 72
Query: 251 LSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQL 310
+H+ L+ G+ ++ + LV MY+K +L +R+VFD +SV W SMI Y++
Sbjct: 73 TMLHAHLIHVGFESDVFVQTSLVDMYSKFSNLRASRQVFDETSTRSVISWNSMIAAYSRS 132
Query: 311 GYPSEAVNLFKRLLKTSVRPNEATLATTLSACAEL--GSLSKGKEIEEYIVLNGLESNRQ 368
+EA+ LF+ +L PN +T + LS A+ GSL +G+ + + L +
Sbjct: 133 FRVNEALKLFREMLGGGFEPNSSTFVSLLSGFADPTHGSLFQGRLLHGCLTKFQLHDDTP 192
Query: 369 VQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVE 428
V+ SL+ M+ G+I+ A VF + +K + W+ M+ GY G + F +M+
Sbjct: 193 VENSLVQMYVNFGQIDSACSVFYAISEKTVISWTIMLGGYLKAGAVAKVFETFSQMRQ-N 251
Query: 429 GLKPDAVVYTSILSACSHSG 448
+ D V+ I+S+C G
Sbjct: 252 NVVLDKFVFVDIISSCIQLG 271
Score = 58.9 bits (141), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 68/144 (47%), Gaps = 2/144 (1%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI N G E LS +S Q V N + ACA++ S+ + + + + + G
Sbjct: 329 MISGYANAGYPREALSLFSMATQNNVRPNGAMLATAISACADLGSLSMRREIEAFIQQDG 388
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
D+ V T LI +Y K + KV + M R + +W+S+++ ++ + ++ + +
Sbjct: 389 LASDSQVSTSLIHLYCKFGSIEKAEKVFNSMI--HRDLAAWSSMMNGYAVHGMGEKTMNL 446
Query: 121 LKEMWVLGLELSASTFVSVVSGCS 144
EM G++ S + S++ CS
Sbjct: 447 FHEMQRSGIKPDGSVYASILLACS 470
>gi|255569403|ref|XP_002525669.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223535105|gb|EEF36787.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 494
Score = 578 bits (1489), Expect = e-162, Method: Compositional matrix adjust.
Identities = 276/453 (60%), Positives = 357/453 (78%), Gaps = 5/453 (1%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MIR+ST G F + L YSSMLQ+GVHGN FTFPL+LKAC+N NSI DG ++HSH++++G
Sbjct: 21 MIRSSTKAGLFFQALDIYSSMLQSGVHGNGFTFPLLLKACSNTNSIRDGTKIHSHLIQLG 80
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
FQ FV T L+DMYSKC D SSRKV DEMP +RS VSWNSIISA+ R L DEAI +
Sbjct: 81 FQH-VFVMTTLLDMYSKCYDLASSRKVFDEMP--MRSTVSWNSIISAYCRFFLVDEAISM 137
Query: 121 LKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGLLN-NEIPLANSVMSMYAKFG 179
L++M ++G +++TF+ + C + G+S+ CC +K GLL ++IPL N++++MY K G
Sbjct: 138 LQKMRLIGFVPTSTTFLCFLPICLLQHGLSIQCCAFKFGLLEGSDIPLTNALLNMYVKHG 197
Query: 180 KVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLIL 239
+V+EAR++FD + E S++SWTT+IGGYV+ GNV EAF L NQMR +S+ D +VF+ LI
Sbjct: 198 QVHEARTLFDMMHEKSLISWTTVIGGYVDFGNVREAFSLFNQMR-ISMRLDFIVFITLIS 256
Query: 240 GCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFL 299
GCA+ GNL LA S+HSLL+K G +++DP+DNLLV+MY+KCGDL A+R FD EKS++L
Sbjct: 257 GCAREGNLLLASSVHSLLVKYGCDDKDPIDNLLVTMYSKCGDLISAQRAFDIAREKSLYL 316
Query: 300 WTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIV 359
WTSMI Y LGYP +A+ LF LL T+++PNEATLAT LSACA+LGSLS G+EIEEYI+
Sbjct: 317 WTSMIAAYTHLGYPVQALRLFNTLLGTAIKPNEATLATILSACADLGSLSMGEEIEEYIL 376
Query: 360 LNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALN 419
NGL S+ QVQTSLIHMF +CG + KAK VFER+ KDLA WS+MINGYAIHGM ++A +
Sbjct: 377 ANGLHSSVQVQTSLIHMFCRCGSLEKAKAVFERLATKDLAAWSSMINGYAIHGMAEEAFS 436
Query: 420 LFYKMQHVEGLKPDAVVYTSILSACSHSGMVDD 452
LF+KMQ VEG+KPDAV+YTSIL ACSHSG+++D
Sbjct: 437 LFHKMQTVEGIKPDAVIYTSILLACSHSGLIED 469
>gi|224118652|ref|XP_002331415.1| predicted protein [Populus trichocarpa]
gi|222873629|gb|EEF10760.1| predicted protein [Populus trichocarpa]
Length = 458
Score = 535 bits (1378), Expect = e-149, Method: Compositional matrix adjust.
Identities = 258/372 (69%), Positives = 307/372 (82%)
Query: 250 ALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQ 309
A S+HSL+ K G N+DPLDNLL+ MY KCGDL AR+VFD L K+VFLWTS+IGGY
Sbjct: 3 ASSLHSLIFKCGCENKDPLDNLLLGMYAKCGDLISARKVFDMALVKTVFLWTSIIGGYTH 62
Query: 310 LGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQV 369
+GYP+EA+ LFK+LLKT+++PN ATLAT LSACA+LGSL GKEIEEYI+ NG +S+RQV
Sbjct: 63 MGYPAEALLLFKKLLKTAIKPNGATLATILSACADLGSLDMGKEIEEYILSNGFQSDRQV 122
Query: 370 QTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEG 429
QTSLIHMFSKCG I KA VFER+ DKDLA WS+MINGYAIHGM ++AL LF+KM ++
Sbjct: 123 QTSLIHMFSKCGSIGKAISVFERISDKDLAAWSSMINGYAIHGMAEEALGLFHKMLEIKE 182
Query: 430 LKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLA 489
+KPDAVV+TSIL ACSH G+V+DGL FFKSMQ +FGI PS+EHY+CLVDLLGRAG+F+LA
Sbjct: 183 IKPDAVVFTSILLACSHVGLVEDGLKFFKSMQKDFGIVPSVEHYMCLVDLLGRAGQFELA 242
Query: 490 LKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSA 549
LKTI MPV++QAQVWAP LSAC KH N+ELGE AA+ LL +NPGS NY+LMANL+TS
Sbjct: 243 LKTIRVMPVKLQAQVWAPFLSACTKHCNLELGELAARKLLYMNPGSHANYVLMANLYTSM 302
Query: 550 GMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKELHIKL 609
G WKEAA R LM DR L K PGWSQVEI+GSV VF+AGDRSH S+DI K L+E+++KL
Sbjct: 303 GKWKEAAVTRSLMIDRGLVKAPGWSQVEINGSVHVFIAGDRSHTQSIDIYKKLEEINLKL 362
Query: 610 LEAGYIAEADIV 621
EAGY+ E D V
Sbjct: 363 AEAGYVPETDTV 374
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 73/265 (27%), Positives = 140/265 (52%), Gaps = 4/265 (1%)
Query: 150 SMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNV 209
S+H ++K G N + PL N ++ MYAK G + AR +FD ++ WT+IIGGY ++
Sbjct: 5 SLHSLIFKCGCENKD-PLDNLLLGMYAKCGDLISARKVFDMALVKTVFLWTSIIGGYTHM 63
Query: 210 GNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLD 269
G EA L ++ + ++ P+ ++ CA +G+L + + +L +G+ ++ +
Sbjct: 64 GYPAEALLLFKKLLKTAIKPNGATLATILSACADLGSLDMGKEIEEYILSNGFQSDRQVQ 123
Query: 270 NLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLK-TSV 328
L+ M++KCG + A VF+ + +K + W+SMI GYA G EA+ LF ++L+ +
Sbjct: 124 TSLIHMFSKCGSIGKAISVFERISDKDLAAWSSMINGYAIHGMAEEALGLFHKMLEIKEI 183
Query: 329 RPNEATLATTLSACAELGSLSKGKEIEEYIVLN-GLESNRQVQTSLIHMFSKCGRINKAK 387
+P+ + L AC+ +G + G + + + + G+ + + L+ + + G+ A
Sbjct: 184 KPDAVVFTSILLACSHVGLVEDGLKFFKSMQKDFGIVPSVEHYMCLVDLLGRAGQFELAL 243
Query: 388 EVFERVPDKDLA-VWSAMINGYAIH 411
+ +P K A VW+ ++ H
Sbjct: 244 KTIRVMPVKLQAQVWAPFLSACTKH 268
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 110/198 (55%), Gaps = 6/198 (3%)
Query: 52 VHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRA 111
+HS + K G + + L+ MY+KC D +S+RKV D V ++V W SII ++
Sbjct: 6 LHSLIFKCGCENKDPLDNLLLGMYAKCGDLISARKVFDMALV--KTVFLWTSIIGGYTHM 63
Query: 112 CLNDEAILVLKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGLLN---NEIPLA 168
EA+L+ K++ ++ + +T +++S C+ + M + + L N ++ +
Sbjct: 64 GYPAEALLLFKKLLKTAIKPNGATLATILSACADLGSLDMGKEIEEYILSNGFQSDRQVQ 123
Query: 169 NSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMS-V 227
S++ M++K G + +A S+F+ I + + +W+++I GY G EA GL ++M + +
Sbjct: 124 TSLIHMFSKCGSIGKAISVFERISDKDLAAWSSMINGYAIHGMAEEALGLFHKMLEIKEI 183
Query: 228 TPDLVVFLNLILGCAQVG 245
PD VVF +++L C+ VG
Sbjct: 184 KPDAVVFTSILLACSHVG 201
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 77/145 (53%), Gaps = 3/145 (2%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+I T+ G E L + +L+T + N T +L ACA++ S+ GK + ++L G
Sbjct: 56 IIGGYTHMGYPAEALLLFKKLLKTAIKPNGATLATILSACADLGSLDMGKEIEEYILSNG 115
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAI-L 119
FQ D VQT LI M+SKC + V + + + + +W+S+I+ ++ + +EA+ L
Sbjct: 116 FQSDRQVQTSLIHMFSKCGSIGKAISVFER--ISDKDLAAWSSMINGYAIHGMAEEALGL 173
Query: 120 VLKEMWVLGLELSASTFVSVVSGCS 144
K + + ++ A F S++ CS
Sbjct: 174 FHKMLEIKEIKPDAVVFTSILLACS 198
Score = 40.4 bits (93), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 53/114 (46%), Gaps = 3/114 (2%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTG-VHGNSFTFPLVLKACANINSIWDGKRVHSHVLK- 58
MI +G EE L + ML+ + ++ F +L AC+++ + DG + + K
Sbjct: 157 MINGYAIHGMAEEALGLFHKMLEIKEIKPDAVVFTSILLACSHVGLVEDGLKFFKSMQKD 216
Query: 59 VGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRAC 112
G L+D+ + F + K + MPV+L++ V W +SA ++ C
Sbjct: 217 FGIVPSVEHYMCLVDLLGRAGQFELALKTIRVMPVKLQAQV-WAPFLSACTKHC 269
>gi|148909481|gb|ABR17838.1| unknown [Picea sitchensis]
Length = 795
Score = 481 bits (1239), Expect = e-133, Method: Compositional matrix adjust.
Identities = 235/617 (38%), Positives = 377/617 (61%), Gaps = 8/617 (1%)
Query: 8 NGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFV 67
NG + + L Y M +TG++ + F V+KAC + + + G++VH ++ GF+ D V
Sbjct: 98 NGFWNKALRLYYQMQRTGINPDKLVFLSVIKACGSQSDLQAGRKVHEDIIARGFESDVIV 157
Query: 68 QTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVL 127
T L MY+KC ++R+V D MP R VVSWN+II+ +S+ EA+ + EM V
Sbjct: 158 GTALASMYTKCGSLENARQVFDRMP--KRDVVSWNAIIAGYSQNGQPYEALALFSEMQVN 215
Query: 128 GLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNE 183
G++ ++ST VSV+ C+ QG +HC + G+ +++ + N +++MYAK G VN
Sbjct: 216 GIKPNSSTLVSVMPVCAHLLALEQGKQIHCYAIRSGI-ESDVLVVNGLVNMYAKCGNVNT 274
Query: 184 ARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQ 243
A +F+ + + SW IIGGY +EA N+M+ + P+ + ++++ CA
Sbjct: 275 AHKLFERMPIRDVASWNAIIGGYSLNSQHHEALAFFNRMQVRGIKPNSITMVSVLPACAH 334
Query: 244 VGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSM 303
+ L +H ++SG+ + D + N LV+MY KCG++ A ++F+ + +K+V W ++
Sbjct: 335 LFALEQGQQIHGYAIRSGFESNDVVGNALVNMYAKCGNVNSAYKLFERMPKKNVVAWNAI 394
Query: 304 IGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGL 363
I GY+Q G+P EA+ LF + ++P+ + + L ACA +L +GK+I Y + +G
Sbjct: 395 ISGYSQHGHPHEALALFIEMQAQGIKPDSFAIVSVLPACAHFLALEQGKQIHGYTIRSGF 454
Query: 364 ESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYK 423
ESN V T L+ +++KCG +N A+++FER+P++D+ W+ MI Y IHG G+ AL LF K
Sbjct: 455 ESNVVVGTGLVDIYAKCGNVNTAQKLFERMPEQDVVSWTTMILAYGIHGHGEDALALFSK 514
Query: 424 MQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRA 483
MQ G K D + +T+IL+ACSH+G+VD GL +F+ M+S++G+ P +EHY CLVDLLGRA
Sbjct: 515 MQET-GTKLDHIAFTAILTACSHAGLVDQGLQYFQCMKSDYGLAPKLEHYACLVDLLGRA 573
Query: 484 GRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMA 543
G D A I M +E A VW LL AC H N+ELGE AAK+L L+P + G Y+L++
Sbjct: 574 GHLDEANGIIKNMSLEPDANVWGALLGACRIHCNIELGEQAAKHLFELDPDNAGYYVLLS 633
Query: 544 NLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLK 603
N++ A W++ A R +M ++ + K+PG S V + VQ F+ GDR+H S I L+
Sbjct: 634 NIYAEAQRWEDVAKLRKMMKEKGVKKQPGCSVVAVHRDVQTFLVGDRTHPQSEQIYAMLE 693
Query: 604 ELHIKLLEAGYIAEADI 620
L+ ++ +AGY+ ++
Sbjct: 694 ILYEQMRKAGYVPNTNL 710
Score = 224 bits (572), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 127/420 (30%), Positives = 225/420 (53%), Gaps = 10/420 (2%)
Query: 97 SVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGC----SFRQGISMH 152
+ V W I + + ++A+ + +M G+ F+SV+ C + G +H
Sbjct: 84 NAVVWKETIIGYVKNGFWNKALRLYYQMQRTGINPDKLVFLSVIKACGSQSDLQAGRKVH 143
Query: 153 CCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNV 212
+ G +++ + ++ SMY K G + AR +FD + + +VSW II GY G
Sbjct: 144 EDIIARG-FESDVIVGTALASMYTKCGSLENARQVFDRMPKRDVVSWNAIIAGYSQNGQP 202
Query: 213 NEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLL 272
EA L ++M+ + P+ ++++ CA + L +H ++SG ++ + N L
Sbjct: 203 YEALALFSEMQVNGIKPNSSTLVSVMPVCAHLLALEQGKQIHCYAIRSGIESDVLVVNGL 262
Query: 273 VSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNE 332
V+MY KCG++ A ++F+ + + V W ++IGGY+ EA+ F R+ ++PN
Sbjct: 263 VNMYAKCGNVNTAHKLFERMPIRDVASWNAIIGGYSLNSQHHEALAFFNRMQVRGIKPNS 322
Query: 333 ATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFER 392
T+ + L ACA L +L +G++I Y + +G ESN V +L++M++KCG +N A ++FER
Sbjct: 323 ITMVSVLPACAHLFALEQGQQIHGYAIRSGFESNDVVGNALVNMYAKCGNVNSAYKLFER 382
Query: 393 VPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDD 452
+P K++ W+A+I+GY+ HG +AL LF +MQ +G+KPD+ S+L AC+H ++
Sbjct: 383 MPKKNVVAWNAIISGYSQHGHPHEALALFIEMQ-AQGIKPDSFAIVSVLPACAHFLALEQ 441
Query: 453 GLSFFK-SMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSA 511
G +++S F E ++ LVD+ + G + A K MP E W ++ A
Sbjct: 442 GKQIHGYTIRSGF--ESNVVVGTGLVDIYAKCGNVNTAQKLFERMP-EQDVVSWTTMILA 498
Score = 221 bits (563), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 127/451 (28%), Positives = 238/451 (52%), Gaps = 18/451 (3%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+I + NG E L+ +S M G+ NS T V+ CA++ ++ GK++H + ++ G
Sbjct: 192 IIAGYSQNGQPYEALALFSEMQVNGIKPNSSTLVSVMPVCAHLLALEQGKQIHCYAIRSG 251
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+ D V GL++MY+KC + ++ K+ + MP+ R V SWN+II +S + EA+
Sbjct: 252 IESDVLVVNGLVNMYAKCGNVNTAHKLFERMPI--RDVASWNAIIGGYSLNSQHHEALAF 309
Query: 121 LKEMWVLGLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
M V G++ ++ T VSV+ C + QG +H + G +N++ + N++++MYA
Sbjct: 310 FNRMQVRGIKPNSITMVSVLPACAHLFALEQGQQIHGYAIRSGFESNDV-VGNALVNMYA 368
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K G VN A +F+ + + ++V+W II GY G+ +EA L +M+ + PD ++
Sbjct: 369 KCGNVNSAYKLFERMPKKNVVAWNAIISGYSQHGHPHEALALFIEMQAQGIKPDSFAIVS 428
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
++ CA L +H ++SG+ + + LV +Y KCG++ A+++F+ + E+
Sbjct: 429 VLPACAHFLALEQGKQIHGYTIRSGFESNVVVGTGLVDIYAKCGNVNTAQKLFERMPEQD 488
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEE 356
V WT+MI Y G+ +A+ LF ++ +T + + L+AC+ G + +G + +
Sbjct: 489 VVSWTTMILAYGIHGHGEDALALFSKMQETGTKLDHIAFTAILTACSHAGLVDQGLQYFQ 548
Query: 357 YIVLN-GLESNRQVQTSLIHMFSKCGRINKAKEVFERVP-DKDLAVWSAMINGYAIH--- 411
+ + GL + L+ + + G +++A + + + + D VW A++ IH
Sbjct: 549 CMKSDYGLAPKLEHYACLVDLLGRAGHLDEANGIIKNMSLEPDANVWGALLGACRIHCNI 608
Query: 412 GMGDQALNLFYKMQHVEGLKPDAVVYTSILS 442
+G+QA +H+ L PD Y +LS
Sbjct: 609 ELGEQA------AKHLFELDPDNAGYYVLLS 633
Score = 218 bits (555), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 124/377 (32%), Positives = 201/377 (53%), Gaps = 18/377 (4%)
Query: 149 ISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSI---------VSW 199
IS H C Y G PL S + + KV R + +T V W
Sbjct: 33 ISYHVCFYFYG----PSPLPTSTVVAQLRRNKVKTTREVSACANQTQFTQTDIRNNAVVW 88
Query: 200 TTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLK 259
I GYV G N+A L QM+R + PD +VFL++I C +L +H ++
Sbjct: 89 KETIIGYVKNGFWNKALRLYYQMQRTGINPDKLVFLSVIKACGSQSDLQAGRKVHEDIIA 148
Query: 260 SGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNL 319
G+ ++ + L SMYTKCG LE AR+VFD + ++ V W ++I GY+Q G P EA+ L
Sbjct: 149 RGFESDVIVGTALASMYTKCGSLENARQVFDRMPKRDVVSWNAIIAGYSQNGQPYEALAL 208
Query: 320 FKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSK 379
F + ++PN +TL + + CA L +L +GK+I Y + +G+ES+ V L++M++K
Sbjct: 209 FSEMQVNGIKPNSSTLVSVMPVCAHLLALEQGKQIHCYAIRSGIESDVLVVNGLVNMYAK 268
Query: 380 CGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTS 439
CG +N A ++FER+P +D+A W+A+I GY+++ +AL F +MQ V G+KP+++ S
Sbjct: 269 CGNVNTAHKLFERMPIRDVASWNAIIGGYSLNSQHHEALAFFNRMQ-VRGIKPNSITMVS 327
Query: 440 ILSACSHSGMVDDGLSFFK-SMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPV 498
+L AC+H ++ G +++S F + + LV++ + G + A K MP
Sbjct: 328 VLPACAHLFALEQGQQIHGYAIRSGFESNDVVGN--ALVNMYAKCGNVNSAYKLFERMP- 384
Query: 499 EVQAQVWAPLLSACMKH 515
+ W ++S +H
Sbjct: 385 KKNVVAWNAIISGYSQH 401
>gi|357148978|ref|XP_003574958.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Brachypodium distachyon]
Length = 598
Score = 472 bits (1215), Expect = e-130, Method: Compositional matrix adjust.
Identities = 239/587 (40%), Positives = 380/587 (64%), Gaps = 11/587 (1%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+I+ + +GS+ L Y +L G+HG++ TFP + K+CA + G VH+H L VG
Sbjct: 16 LIQLAAASGSYSRCLRHYVPLLAAGLHGDASTFPSLAKSCAALRLPRLGCSVHAHALLVG 75
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
D FV T L+DMY+KC+ +R++ DEMP +++SWN +++A+S++ EA+ +
Sbjct: 76 AASDVFVLTSLLDMYAKCACLPDARRLFDEMPSP--TLISWNCMVTAYSKSSCVTEAVAM 133
Query: 121 LKEMWVLGLELSASTFVSVVSG-----CSFRQGISMHCCVYKLGLLNNEIPLANSVMSMY 175
M +G+ S +T V ++SG + G+ ++ K GL + ++P+ NSV++M
Sbjct: 134 FNTMRGVGVRPSGATLVGLLSGRVDSLSTRNPGLCLYGYSMKSGL-DTDLPVLNSVLTML 192
Query: 176 AKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFL 235
+ G++ +A +FD + E S+V+W+ ++ G++ G+ + FGL N M+ D V +
Sbjct: 193 VRAGQLYDACLLFDSMHEKSVVTWSAMVSGFLQTGDYMKVFGLFNHMQTAGYKFDSVALV 252
Query: 236 NLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEK 295
NLI +GNL +A +H+LL+KSG+ +E L + LV++Y KCGDLE A+ VFDAV K
Sbjct: 253 NLISAAVLLGNLLVAKGVHALLIKSGFESEQDLMSSLVNLYAKCGDLEAAQEVFDAVHRK 312
Query: 296 SVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIE 355
+V LWTSMI GYA+ G+P +A+ +F +L T V PNEAT+++ LSACA LGS ++ K++E
Sbjct: 313 NVVLWTSMISGYAEGGHPDKALKMFDSMLCTDVEPNEATVSSVLSACANLGSANQAKKVE 372
Query: 356 EYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERV--PDKDLAVWSAMINGYAIHGM 413
+++V GL+ + +V T LI + KCG + A+E+F+ V ++DLA+WSAMINGYA G
Sbjct: 373 DHVVAIGLQKDLRVATGLIDTYCKCGNVTLAREIFDGVTTTNRDLAIWSAMINGYACIGE 432
Query: 414 GDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHY 473
G +AL LF +MQ+ +G++PDA+V+T +L+AC++SG+VD+GL F+S+ +GIEPSIEHY
Sbjct: 433 GSEALVLFNEMQN-QGVQPDAIVFTHLLTACNYSGLVDEGLQCFRSLTVEYGIEPSIEHY 491
Query: 474 LCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNP 533
+C +DLL +AG A + ++P+++Q QV AP+L+A H E ++ LL L P
Sbjct: 492 MCTIDLLCKAGHLSAAKEFFRKIPIQLQNQVLAPILTAYSAHCADSSIELVSEELLNLEP 551
Query: 534 GSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDG 580
++ + +LMAN+ G WK+A R L+ + L KEPG S +E+ G
Sbjct: 552 HNSDHCVLMANMLNCLGKWKKATDYRRLITKQGLVKEPGRSCIEMSG 598
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 68/276 (24%), Positives = 123/276 (44%), Gaps = 32/276 (11%)
Query: 300 WTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIV 359
W +I A G S + + LL + + +T + +CA L G + + +
Sbjct: 13 WNRLIQLAAASGSYSRCLRHYVPLLAAGLHGDASTFPSLAKSCAALRLPRLGCSVHAHAL 72
Query: 360 LNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALN 419
L G S+ V TSL+ M++KC + A+ +F+ +P L W+ M+ Y+ +A+
Sbjct: 73 LVGAASDVFVLTSLLDMYAKCACLPDARRLFDEMPSPTLISWNCMVTAYSKSSCVTEAVA 132
Query: 420 LFYKMQHVEGLKPDAVVYTSILSACSHSGMVDD------GLSFFK-SMQSNFGIEPSIEH 472
+F M+ V G++P +L SG VD GL + SM+S G++ +
Sbjct: 133 MFNTMRGV-GVRPSGATLVGLL-----SGRVDSLSTRNPGLCLYGYSMKS--GLDTDLPV 184
Query: 473 YLCLVDLLGRAGR-FD--LALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLL 529
++ +L RAG+ +D L ++HE V W+ ++S + + G+Y K
Sbjct: 185 LNSVLTMLVRAGQLYDACLLFDSMHEKSV----VTWSAMVSGFL-----QTGDY-MKVFG 234
Query: 530 TLNPGSTGNY----ILMANLFTSAGMWKEAATARGL 561
N T Y + + NL ++A + A+G+
Sbjct: 235 LFNHMQTAGYKFDSVALVNLISAAVLLGNLLVAKGV 270
>gi|293333352|ref|NP_001168668.1| uncharacterized protein LOC100382456 [Zea mays]
gi|223950067|gb|ACN29117.1| unknown [Zea mays]
Length = 602
Score = 450 bits (1157), Expect = e-123, Method: Compositional matrix adjust.
Identities = 236/587 (40%), Positives = 369/587 (62%), Gaps = 10/587 (1%)
Query: 2 IRNSTNNGSFEETLSTYSS-MLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
I+ + +GS+ L Y+ +L G+ G++ TFP + K+CA + G+ VH+ G
Sbjct: 18 IQLAAASGSYGHCLRLYAGPLLAAGLRGDASTFPSLAKSCAALRLPGLGRAVHALAFLSG 77
Query: 61 --FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAI 118
+DAFV+T L+DMY+KC + ++ DE P R++V+WN +ISA+ R+ +EA+
Sbjct: 78 AAVSRDAFVRTSLVDMYAKCGRLPDAHRLFDETPCSSRTLVAWNCMISAYGRSSQVEEAV 137
Query: 119 LVLKEMWVLGLELSASTFVSVVSGC----SFR-QGISMHCCVYKLGLLNNEIPLANSVMS 173
V M + S ST V ++SGC S R G+S++ K GL + ++ ++NSV++
Sbjct: 138 GVFNAMRRAEVRPSGSTVVGLLSGCADSVSARYPGVSVYGLTIKSGL-DADLLVSNSVLT 196
Query: 174 MYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVV 233
M + G+++ AR +FD + S+V+W+ + Y+ G+ E F L + MR D VV
Sbjct: 197 MLVRGGQLDSARLLFDRVENKSVVTWSAMASAYLQTGDWMEVFALFSSMRETEQPMDSVV 256
Query: 234 FLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVL 293
NLI GN +A +H+L +K G++ ++ L LV++Y+KCG+L AR VFD++
Sbjct: 257 LANLITAAMLFGNNLVAKGVHALAIKVGFDRQEDLAASLVNLYSKCGNLLAAREVFDSLQ 316
Query: 294 EKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKE 353
KSV +WTSM+ GY + GYP EA+ F +L V PN+AT+ LSA A LGS + ++
Sbjct: 317 WKSVIMWTSMLNGYVECGYPDEALATFDAMLCAKVEPNKATVLAVLSAGANLGSANVAQK 376
Query: 354 IEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGM 413
+EE++ L+S+ QV T LI M+ KCG I +A+++F+ VP++DLA+WSAMING+A +G
Sbjct: 377 VEEHVKAMELQSDLQVCTRLIDMYCKCGSIQRARKIFDSVPNRDLAIWSAMINGHACNGE 436
Query: 414 GDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHY 473
G +A+ LF +MQ +G++PDA+V+T IL+ACSHSG VD+GL F SM + GIEPS+EHY
Sbjct: 437 GSEAVVLFNEMQS-KGVRPDAIVFTHILTACSHSGSVDEGLRCFHSMTAEHGIEPSVEHY 495
Query: 474 LCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNP 533
+C++DLL +AG A+K EMPV ++ QV APL+SA + E+ ++ LL L
Sbjct: 496 MCMIDLLCKAGHLSSAIKFFGEMPVRLRNQVLAPLISAHRVNGADSSVEFMSEGLLNLGS 555
Query: 534 GSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDG 580
+G+ +L++N+ + G WK+A + R L+ + L K+PGWS +E+ G
Sbjct: 556 QDSGHCVLISNMLSCLGQWKKARSYRTLISKQGLVKKPGWSYIELGG 602
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 93/216 (43%), Gaps = 3/216 (1%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
M+ G +E L+T+ +ML V N T VL A AN+ S ++V HV +
Sbjct: 326 MLNGYVECGYPDEALATFDAMLCAKVEPNKATVLAVLSAGANLGSANVAQKVEEHVKAME 385
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
Q D V T LIDMY KC +RK+ D +P R ++ W+++I+ H+ EA+++
Sbjct: 386 LQSDLQVCTRLIDMYCKCGSIQRARKIFDSVPNRDLAI--WSAMINGHACNGEGSEAVVL 443
Query: 121 LKEMWVLGLELSASTFVSVVSGCSFRQGISMHC-CVYKLGLLNNEIPLANSVMSMYAKFG 179
EM G+ A F +++ CS + C + + + P M M
Sbjct: 444 FNEMQSKGVRPDAIVFTHILTACSHSGSVDEGLRCFHSMTAEHGIEPSVEHYMCMIDLLC 503
Query: 180 KVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEA 215
K S GE + ++ ++ VN A
Sbjct: 504 KAGHLSSAIKFFGEMPVRLRNQVLAPLISAHRVNGA 539
>gi|328774749|gb|AEB39774.1| pentatricopeptide repeat protein 65 [Funaria hygrometrica]
Length = 771
Score = 444 bits (1142), Expect = e-122, Method: Compositional matrix adjust.
Identities = 222/619 (35%), Positives = 371/619 (59%), Gaps = 8/619 (1%)
Query: 7 NNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAF 66
G +E L ++M+ G S F +L+ CA + S+ G+ VH+ +LK G Q + +
Sbjct: 73 KQGRLKEALGILNTMILQGTRVYSDVFRGLLQECARLRSLEQGREVHAAILKSGIQPNRY 132
Query: 67 VQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWV 126
++ L+ MY+KC +R+V D +R R++VSW ++I A N EA + M +
Sbjct: 133 LENTLLSMYAKCGSLTDARRVFD--GIRDRNIVSWTAMIEAFVAGNQNLEAYKCYETMKL 190
Query: 127 LGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVN 182
G + TFVS+++ + + G +H + K GL E + S++ MYAK G ++
Sbjct: 191 AGCKPDKVTFVSLLNAFTNPELLQVGQKVHMEIAKAGL-ELEPRVGTSLVGMYAKCGDIS 249
Query: 183 EARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCA 242
+A+ IFD++ E ++V+WT +I GY G V+ A L +M++ V P+ + + +++ GC
Sbjct: 250 KAQVIFDKLPEKNVVTWTLLIAGYAQQGQVDVALELLEKMQQAEVAPNKITYTSILQGCT 309
Query: 243 QVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTS 302
L +H +++SGY E + N L++MY KCG L+ AR++F + + V WT+
Sbjct: 310 TPLALEHGKKVHRYIIQSGYGREIWVVNALITMYCKCGGLKEARKLFGDLPHRDVVTWTA 369
Query: 303 MIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNG 362
M+ GYAQLG+ EA++LF+R+ + ++P++ T + L++C+ L +GK I + +V G
Sbjct: 370 MVTGYAQLGFHDEAIDLFRRMQQQGIKPDKMTFTSALTSCSSPAFLQEGKSIHQQLVHAG 429
Query: 363 LESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFY 422
+ +Q++L+ M++KCG ++ A+ VF ++ ++++ W+AMI G A HG +AL F
Sbjct: 430 YSLDVYLQSALVSMYAKCGSMDDARLVFNQMSERNVVAWTAMITGCAQHGRCREALEYFE 489
Query: 423 KMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGR 482
+M+ +G+KPD V +TS+LSAC+H G+V++G F+SM ++GI+P +EHY C VDLLGR
Sbjct: 490 QMKK-QGIKPDKVTFTSVLSACTHVGLVEEGRKHFRSMYLDYGIKPMVEHYSCFVDLLGR 548
Query: 483 AGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILM 542
AG + A I MP + VW LLSAC H +VE GE AA+N+L L+P G Y+ +
Sbjct: 549 AGHLEEAENVILTMPFQPGPSVWGALLSACRIHSDVERGERAAENVLKLDPDDDGAYVAL 608
Query: 543 ANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTL 602
+N++ +AG +++A R +M+ R + KEPG S +E+DG V VF D+SH + +I L
Sbjct: 609 SNIYAAAGRYEDAEKVRQVMEKRDVVKEPGQSWIEVDGKVHVFHVEDKSHPEAKEIYAEL 668
Query: 603 KELHIKLLEAGYIAEADIV 621
+L ++ E GY+ + V
Sbjct: 669 GKLTEQIKEQGYVPDTRFV 687
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 99/402 (24%), Positives = 191/402 (47%), Gaps = 41/402 (10%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+I G + L M Q V N T+ +L+ C ++ GK+VH ++++ G
Sbjct: 269 LIAGYAQQGQVDVALELLEKMQQAEVAPNKITYTSILQGCTTPLALEHGKKVHRYIIQSG 328
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+ ++ +V LI MY KC +RK+ ++P R VV+W ++++ +++ +DEAI +
Sbjct: 329 YGREIWVVNALITMYCKCGGLKEARKLFGDLP--HRDVVTWTAMVTGYAQLGFHDEAIDL 386
Query: 121 LKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
+ M G++ TF S ++ CS ++G S+H + G + ++ L ++++SMYA
Sbjct: 387 FRRMQQQGIKPDKMTFTSALTSCSSPAFLQEGKSIHQQLVHAG-YSLDVYLQSALVSMYA 445
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K G +++AR +F+++ E ++V+WT +I G G EA QM++ + PD V F +
Sbjct: 446 KCGSMDDARLVFNQMSERNVVAWTAMITGCAQHGRCREALEYFEQMKKQGIKPDKVTFTS 505
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
++ C VG L++ G + SMY D ++
Sbjct: 506 VLSACTHVG-----------LVEEGRKH-------FRSMY------------LDYGIKPM 535
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEE 356
V ++ + + G+ EA N+ +L +P + LSAC + +G+ E
Sbjct: 536 VEHYSCFVDLLGRAGHLEEAENV---ILTMPFQPGPSVWGALLSACRIHSDVERGERAAE 592
Query: 357 YIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDL 398
VL + +L ++++ GR A++V + + +D+
Sbjct: 593 N-VLKLDPDDDGAYVALSNIYAAAGRYEDAEKVRQVMEKRDV 633
>gi|168003497|ref|XP_001754449.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694551|gb|EDQ80899.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 723
Score = 437 bits (1125), Expect = e-120, Method: Compositional matrix adjust.
Identities = 224/620 (36%), Positives = 366/620 (59%), Gaps = 9/620 (1%)
Query: 7 NNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAF 66
G +E L ++M+ G S F +L+ CA + S+ G+ VH+ +LK G Q + +
Sbjct: 24 KTGRLKEALGIMNTMILQGTRVYSDVFRGLLQECARLRSLEQGREVHAAILKSGIQPNRY 83
Query: 67 VQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWV 126
++ L+ MY+KC +R+V D +R R++VSW ++I A N EA + M +
Sbjct: 84 LENTLLSMYAKCGSLTDARRVFDS--IRDRNIVSWTAMIEAFVAGNKNLEAFKCYETMKL 141
Query: 127 LGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVN 182
G + TFVS+++ + + G +H + + GL E + S++ MYAK G ++
Sbjct: 142 AGCKPDKVTFVSLLNAFTNPELLQLGQKVHMEIVEAGL-ELEPRVGTSLVGMYAKCGDIS 200
Query: 183 EARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCA 242
+AR IFD + E ++V+WT +I GY G V+ A L M++ V P+ + F +++ GC
Sbjct: 201 KARVIFDRLPEKNVVTWTLLIAGYAQQGQVDVALELLETMQQAEVAPNKITFASILQGCT 260
Query: 243 QVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTS 302
L +H +++SGY E + N L++MY KCG LE AR++F + + V WT+
Sbjct: 261 TPAALEHGKKVHRYIIQSGYGRELWVVNSLITMYCKCGGLEEARKLFSDLPHRDVVTWTA 320
Query: 303 MIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNG 362
M+ GYAQLG+ EA+NLF+R+ + ++P++ T + L++C+ L +GK I + +V G
Sbjct: 321 MVTGYAQLGFHDEAINLFRRMQQQGIKPDKMTFTSVLTSCSSPAFLQEGKRIHQQLVHAG 380
Query: 363 LESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGY-AIHGMGDQALNLF 421
+ +Q++L+ M++KCG ++ A VF ++ ++++ W+A+I G A HG +AL F
Sbjct: 381 YNLDVYLQSALVSMYAKCGSMDDASLVFNQMSERNVVAWTAIITGCCAQHGRCREALEYF 440
Query: 422 YKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLG 481
+M+ +G+KPD V +TS+LSAC+H G+V++G F+SM ++GI+P +EHY C VDLLG
Sbjct: 441 DQMKK-QGIKPDKVTFTSVLSACTHVGLVEEGRKHFRSMYLDYGIKPMVEHYSCFVDLLG 499
Query: 482 RAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYIL 541
RAG + A I MP VW LLSAC H +VE GE AA+N+L L+P G Y+
Sbjct: 500 RAGHLEEAENVILSMPFIPGPSVWGALLSACRVHSDVERGERAAENVLKLDPDDDGAYVA 559
Query: 542 MANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKT 601
+++++ +AG +++A R +M+ R + KEPG S +E+DG V VF D+SH S I
Sbjct: 560 LSSIYAAAGRYEDAEKVRQVMEKRDVVKEPGQSWIEVDGKVHVFHVEDKSHPESEQIYVE 619
Query: 602 LKELHIKLLEAGYIAEADIV 621
L +L ++ E GY+ + V
Sbjct: 620 LGKLTEQIKEMGYVPDTRFV 639
Score = 143 bits (361), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 101/403 (25%), Positives = 190/403 (47%), Gaps = 42/403 (10%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+I G + L +M Q V N TF +L+ C ++ GK+VH ++++ G
Sbjct: 220 LIAGYAQQGQVDVALELLETMQQAEVAPNKITFASILQGCTTPAALEHGKKVHRYIIQSG 279
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+ ++ +V LI MY KC +RK+ ++P R VV+W ++++ +++ +DEAI +
Sbjct: 280 YGRELWVVNSLITMYCKCGGLEEARKLFSDLP--HRDVVTWTAMVTGYAQLGFHDEAINL 337
Query: 121 LKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
+ M G++ TF SV++ CS ++G +H + G N ++ L ++++SMYA
Sbjct: 338 FRRMQQQGIKPDKMTFTSVLTSCSSPAFLQEGKRIHQQLVHAG-YNLDVYLQSALVSMYA 396
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGG-YVNVGNVNEAFGLCNQMRRMSVTPDLVVFL 235
K G +++A +F+++ E ++V+WT II G G EA +QM++ + PD V F
Sbjct: 397 KCGSMDDASLVFNQMSERNVVAWTAIITGCCAQHGRCREALEYFDQMKKQGIKPDKVTFT 456
Query: 236 NLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEK 295
+++ C VG L++ G + SMY D ++
Sbjct: 457 SVLSACTHVG-----------LVEEGRKH-------FRSMY------------LDYGIKP 486
Query: 296 SVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIE 355
V ++ + + G+ EA N+ +L P + LSAC + +G+
Sbjct: 487 MVEHYSCFVDLLGRAGHLEEAENV---ILSMPFIPGPSVWGALLSACRVHSDVERGERAA 543
Query: 356 EYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDL 398
E VL + +L +++ GR A++V + + +D+
Sbjct: 544 EN-VLKLDPDDDGAYVALSSIYAAAGRYEDAEKVRQVMEKRDV 585
>gi|449465002|ref|XP_004150218.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Cucumis sativus]
gi|449500809|ref|XP_004161200.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Cucumis sativus]
Length = 926
Score = 434 bits (1116), Expect = e-119, Method: Compositional matrix adjust.
Identities = 224/618 (36%), Positives = 352/618 (56%), Gaps = 8/618 (1%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI + +G++ E+++ + ML+ G+ NS+TF +LK A + + +G++VH + K+G
Sbjct: 222 MISEYSGSGNYGESINLFKQMLELGIKPNSYTFSSILKCFAAVARVEEGRQVHGLICKLG 281
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F V LI Y ++K+ DE+ R V+SWNS+IS + + L+D I +
Sbjct: 282 FNSYNTVVNSLISFYFVGRKVRCAQKLFDELTDR--DVISWNSMISGYVKNGLDDRGIEI 339
Query: 121 LKEMWVLGLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
+M V G+++ +T V+V C + G +H K L+ E+ N+++ MY+
Sbjct: 340 FIKMLVFGVDIDLATMVNVFVACANIGTLLLGKVLHSYSIKAATLDREVRFNNTLLDMYS 399
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K G +N A +F+ + E ++VSWT++I GYV G + A L ++M+ V PD+ +
Sbjct: 400 KCGDLNSAIRVFERMDEKTVVSWTSMITGYVREGLSDGAIKLFDEMKSRGVVPDVYAVTS 459
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
++ CA GNL +H + ++ + N L MY KCG ++ A VF + +K
Sbjct: 460 ILNACAINGNLKSGKIVHDYIRENNLETNSFVSNALTDMYAKCGSMKDAHDVFSHMKKKD 519
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEE 356
V W +MIGGY + P+EA+ LF + + S +P+ T+A L ACA L +L KG+EI
Sbjct: 520 VISWNTMIGGYTKNSLPNEALTLFAEMQRES-KPDGTTVACILPACASLAALDKGREIHG 578
Query: 357 YIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQ 416
Y + NG ++ V +++ M+ KCG + A+ +F+ +P+KDL W+ MI GY +HG G +
Sbjct: 579 YALRNGYSEDKYVTNAVVDMYVKCGLLVLARSLFDMIPNKDLVSWTVMIAGYGMHGYGSE 638
Query: 417 ALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCL 476
A+N F +M+ + G++PD V + SIL ACSHSG++D+G F M+ IEP++EHY C+
Sbjct: 639 AINTFNQMR-MTGIEPDEVSFISILYACSHSGLLDEGWKIFNIMKKECQIEPNLEHYACM 697
Query: 477 VDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGST 536
VDLL R G A K I MP++ A +W LL C HH+V+L E A+ + L P +T
Sbjct: 698 VDLLARTGNLVKAHKFIKAMPIKPDATIWGALLCGCRIHHDVKLAEKVAERIFELEPENT 757
Query: 537 GNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSV 596
G Y+L+AN++ A W+E R + R L K PG S +EI G + +FVAGD S +
Sbjct: 758 GYYVLLANIYAEAEKWEEVQKLRKKIGQRGLKKNPGCSWIEIKGKINIFVAGDCSKPQAK 817
Query: 597 DIRKTLKELHIKLLEAGY 614
I LK L K+ E GY
Sbjct: 818 KIELLLKRLRSKMKEEGY 835
Score = 244 bits (623), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 146/423 (34%), Positives = 226/423 (53%), Gaps = 10/423 (2%)
Query: 36 VLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRL 95
+L+ CA SI DG+RV S + G D + L+ MY KC D R V D++
Sbjct: 156 ILQLCAERKSIRDGRRVRSIIESSGVMIDGILGVKLVFMYVKCGDLKEGRMVFDKLSE-- 213
Query: 96 RSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVV----SGCSFRQGISM 151
+ WN +IS +S + E+I + K+M LG++ ++ TF S++ + +G +
Sbjct: 214 SKIFLWNLMISEYSGSGNYGESINLFKQMLELGIKPNSYTFSSILKCFAAVARVEEGRQV 273
Query: 152 HCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGN 211
H + KLG N+ + NS++S Y KV A+ +FDE+ + ++SW ++I GYV G
Sbjct: 274 HGLICKLG-FNSYNTVVNSLISFYFVGRKVRCAQKLFDELTDRDVISWNSMISGYVKNGL 332
Query: 212 VNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSG-YNNEDPLDN 270
+ + +M V DL +N+ + CA +G L L +HS +K+ + E +N
Sbjct: 333 DDRGIEIFIKMLVFGVDIDLATMVNVFVACANIGTLLLGKVLHSYSIKAATLDREVRFNN 392
Query: 271 LLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRP 330
L+ MY+KCGDL A RVF+ + EK+V WTSMI GY + G A+ LF + V P
Sbjct: 393 TLLDMYSKCGDLNSAIRVFERMDEKTVVSWTSMITGYVREGLSDGAIKLFDEMKSRGVVP 452
Query: 331 NEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVF 390
+ + + L+ACA G+L GK + +YI N LE+N V +L M++KCG + A +VF
Sbjct: 453 DVYAVTSILNACAINGNLKSGKIVHDYIRENNLETNSFVSNALTDMYAKCGSMKDAHDVF 512
Query: 391 ERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMV 450
+ KD+ W+ MI GY + + ++AL LF +MQ KPD IL AC+ +
Sbjct: 513 SHMKKKDVISWNTMIGGYTKNSLPNEALTLFAEMQRES--KPDGTTVACILPACASLAAL 570
Query: 451 DDG 453
D G
Sbjct: 571 DKG 573
Score = 172 bits (435), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 101/324 (31%), Positives = 169/324 (52%), Gaps = 7/324 (2%)
Query: 135 TFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDE 190
+ S++ C S R G + + G++ + I L ++ MY K G + E R +FD+
Sbjct: 152 AYCSILQLCAERKSIRDGRRVRSIIESSGVMIDGI-LGVKLVFMYVKCGDLKEGRMVFDK 210
Query: 191 IGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLA 250
+ E+ I W +I Y GN E+ L QM + + P+ F +++ A V +
Sbjct: 211 LSESKIFLWNLMISEYSGSGNYGESINLFKQMLELGIKPNSYTFSSILKCFAAVARVEEG 270
Query: 251 LSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQL 310
+H L+ K G+N+ + + N L+S Y + A+++FD + ++ V W SMI GY +
Sbjct: 271 RQVHGLICKLGFNSYNTVVNSLISFYFVGRKVRCAQKLFDELTDRDVISWNSMISGYVKN 330
Query: 311 GYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEY-IVLNGLESNRQV 369
G + +F ++L V + AT+ ACA +G+L GK + Y I L+ +
Sbjct: 331 GLDDRGIEIFIKMLVFGVDIDLATMVNVFVACANIGTLLLGKVLHSYSIKAATLDREVRF 390
Query: 370 QTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEG 429
+L+ M+SKCG +N A VFER+ +K + W++MI GY G+ D A+ LF +M+ G
Sbjct: 391 NNTLLDMYSKCGDLNSAIRVFERMDEKTVVSWTSMITGYVREGLSDGAIKLFDEMKS-RG 449
Query: 430 LKPDAVVYTSILSACSHSGMVDDG 453
+ PD TSIL+AC+ +G + G
Sbjct: 450 VVPDVYAVTSILNACAINGNLKSG 473
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 144/286 (50%), Gaps = 2/286 (0%)
Query: 230 DLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVF 289
DL + +++ CA+ ++ + S++ SG + L LV MY KCGDL+ R VF
Sbjct: 149 DLGAYCSILQLCAERKSIRDGRRVRSIIESSGVMIDGILGVKLVFMYVKCGDLKEGRMVF 208
Query: 290 DAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLS 349
D + E +FLW MI Y+ G E++NLFK++L+ ++PN T ++ L A + +
Sbjct: 209 DKLSESKIFLWNLMISEYSGSGNYGESINLFKQMLELGIKPNSYTFSSILKCFAAVARVE 268
Query: 350 KGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYA 409
+G+++ I G S V SLI + ++ A+++F+ + D+D+ W++MI+GY
Sbjct: 269 EGRQVHGLICKLGFNSYNTVVNSLISFYFVGRKVRCAQKLFDELTDRDVISWNSMISGYV 328
Query: 410 IHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPS 469
+G+ D+ + +F KM V G+ D ++ AC++ G + G ++
Sbjct: 329 KNGLDDRGIEIFIKML-VFGVDIDLATMVNVFVACANIGTLLLGKVLHSYSIKAATLDRE 387
Query: 470 IEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKH 515
+ L+D+ + G + A++ M E W +++ ++
Sbjct: 388 VRFNNTLLDMYSKCGDLNSAIRVFERMD-EKTVVSWTSMITGYVRE 432
>gi|357519003|ref|XP_003629790.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355523812|gb|AET04266.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 908
Score = 433 bits (1114), Expect = e-118, Method: Compositional matrix adjust.
Identities = 222/609 (36%), Positives = 361/609 (59%), Gaps = 7/609 (1%)
Query: 9 GSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQ 68
G+F E++S + M + GV GN +TF VLK A + + + KRVH +VLK+GF + V
Sbjct: 174 GNFRESVSLFKKMQKLGVVGNCYTFTCVLKCFAALGKVKECKRVHGYVLKLGFGSNTAVV 233
Query: 69 TGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLG 128
LI Y K S+ + DE+ VVSWNS+I+ + + + +M +LG
Sbjct: 234 NSLIAAYFKFGGVESAHNLFDELSEP--DVVSWNSMINGCVVNGFSGNGLEIFIQMLILG 291
Query: 129 LELSASTFVSVVSGCSFRQGISMHCCVYKLGL---LNNEIPLANSVMSMYAKFGKVNEAR 185
+E+ +T VSV+ C+ +S+ ++ G+ + E+ +N+++ MY+K G +N A
Sbjct: 292 VEVDLTTLVSVLVACANIGNLSLGRALHGFGVKACFSEEVVFSNTLLDMYSKCGNLNGAT 351
Query: 186 SIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVG 245
+F ++G+T+IVSWT+II YV G ++A GL ++M+ V PD+ +++ CA
Sbjct: 352 EVFVKMGDTTIVSWTSIIAAYVREGLYSDAIGLFDEMQSKGVRPDIYTVTSIVHACACSS 411
Query: 246 NLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIG 305
+L +HS ++K+G + P+ N L++MY KCG +E AR VF + K + W +MIG
Sbjct: 412 SLDKGRDVHSYVIKNGMGSNLPVTNALINMYAKCGSVEEARLVFSKIPVKDIVSWNTMIG 471
Query: 306 GYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLES 365
GY+Q P+EA+ LF + K +P++ T+A L ACA L +L KG+EI +I+ G S
Sbjct: 472 GYSQNLLPNEALELFLDMQK-QFKPDDITMACVLPACAGLAALDKGREIHGHILRRGYFS 530
Query: 366 NRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQ 425
+ V +L+ M++KCG + A+ +F+ +P KDL W+ MI GY +HG G++A++ F +M+
Sbjct: 531 DLHVACALVDMYAKCGLLVLAQLLFDMIPKKDLISWTVMIAGYGMHGFGNEAISTFNEMR 590
Query: 426 HVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGR 485
+ G++PD +++IL+ACSHSG++++G FF SM++ G+EP +EHY C+VDLL R G
Sbjct: 591 -IAGIEPDESSFSAILNACSHSGLLNEGWKFFNSMRNECGVEPKLEHYACVVDLLARMGN 649
Query: 486 FDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANL 545
A K I MP++ +W LLS C HH+V+L E A+++ L P +T Y+++AN+
Sbjct: 650 LSKAYKFIESMPIKPDTTIWGVLLSGCRIHHDVKLAEKVAEHIFELEPDNTRYYVVLANV 709
Query: 546 FTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKEL 605
+ A W+E R M R + PG S +E+ G +FVAG+ H + I L +L
Sbjct: 710 YAEAEKWEEVKKLRKRMQKRGFKQNPGCSWIEVGGKFNIFVAGNSKHPQAKKIDVLLSKL 769
Query: 606 HIKLLEAGY 614
+++ Y
Sbjct: 770 TMQMQNEDY 778
Score = 256 bits (655), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 158/497 (31%), Positives = 259/497 (52%), Gaps = 27/497 (5%)
Query: 6 TNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDA 65
T + S+E L++Y S+LQ CA S+ DGKRVHS ++ G D
Sbjct: 85 TKSKSYELGLNSYCSVLQL---------------CAEKKSLEDGKRVHSVIISNGISVDE 129
Query: 66 FVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMW 125
+ L+ MY C D V RK+ D+ + V WN ++S +++ E++ + K+M
Sbjct: 130 ALGAKLVFMYVNCGDLVQGRKIFDK--IMNDKVFLWNLLMSEYAKIGNFRESVSLFKKMQ 187
Query: 126 VLGLELSASTFVSVVSGC-----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGK 180
LG+ + TF V+ C ++ +H V KLG +N + NS+++ Y KFG
Sbjct: 188 KLGVVGNCYTFTCVLK-CFAALGKVKECKRVHGYVLKLGFGSN-TAVVNSLIAAYFKFGG 245
Query: 181 VNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILG 240
V A ++FDE+ E +VSW ++I G V G + QM + V DL +++++
Sbjct: 246 VESAHNLFDELSEPDVVSWNSMINGCVVNGFSGNGLEIFIQMLILGVEVDLTTLVSVLVA 305
Query: 241 CAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLW 300
CA +GNL L ++H +K+ ++ E N L+ MY+KCG+L A VF + + ++ W
Sbjct: 306 CANIGNLSLGRALHGFGVKACFSEEVVFSNTLLDMYSKCGNLNGATEVFVKMGDTTIVSW 365
Query: 301 TSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVL 360
TS+I Y + G S+A+ LF + VRP+ T+ + + ACA SL KG+++ Y++
Sbjct: 366 TSIIAAYVREGLYSDAIGLFDEMQSKGVRPDIYTVTSIVHACACSSSLDKGRDVHSYVIK 425
Query: 361 NGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNL 420
NG+ SN V +LI+M++KCG + +A+ VF ++P KD+ W+ MI GY+ + + ++AL L
Sbjct: 426 NGMGSNLPVTNALINMYAKCGSVEEARLVFSKIPVKDIVSWNTMIGGYSQNLLPNEALEL 485
Query: 421 FYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLL 480
F MQ + KPD + +L AC+ +D G + G + LVD+
Sbjct: 486 FLDMQ--KQFKPDDITMACVLPACAGLAALDKGREIHGHILRR-GYFSDLHVACALVDMY 542
Query: 481 GRAGRFDLALKTIHEMP 497
+ G LA +P
Sbjct: 543 AKCGLLVLAQLLFDMIP 559
Score = 212 bits (540), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 144/449 (32%), Positives = 232/449 (51%), Gaps = 15/449 (3%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI NG L + ML GV + T VL ACANI ++ G+ +H +K
Sbjct: 267 MINGCVVNGFSGNGLEIFIQMLILGVEVDLTTLVSVLVACANIGNLSLGRALHGFGVKAC 326
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F ++ L+DMYSKC + + +V +M ++VSW SII+A+ R L +AI +
Sbjct: 327 FSEEVVFSNTLLDMYSKCGNLNGATEVFVKMGD--TTIVSWTSIIAAYVREGLYSDAIGL 384
Query: 121 LKEMWVLGLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
EM G+ T S+V C S +G +H V K G+ +N +P+ N++++MYA
Sbjct: 385 FDEMQSKGVRPDIYTVTSIVHACACSSSLDKGRDVHSYVIKNGMGSN-LPVTNALINMYA 443
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K G V EAR +F +I IVSW T+IGGY NEA L M++ PD +
Sbjct: 444 KCGSVEEARLVFSKIPVKDIVSWNTMIGGYSQNLLPNEALELFLDMQK-QFKPDDITMAC 502
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
++ CA + L +H +L+ GY ++ + LV MY KCG L LA+ +FD + +K
Sbjct: 503 VLPACAGLAALDKGREIHGHILRRGYFSDLHVACALVDMYAKCGLLVLAQLLFDMIPKKD 562
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKG-KEIE 355
+ WT MI GY G+ +EA++ F + + P+E++ + L+AC+ G L++G K
Sbjct: 563 LISWTVMIAGYGMHGFGNEAISTFNEMRIAGIEPDESSFSAILNACSHSGLLNEGWKFFN 622
Query: 356 EYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDK-DLAVWSAMINGYAIHGMG 414
G+E + ++ + ++ G ++KA + E +P K D +W +++G IH
Sbjct: 623 SMRNECGVEPKLEHYACVVDLLARMGNLSKAYKFIESMPIKPDTTIWGVLLSGCRIH--- 679
Query: 415 DQALNLFYKM-QHVEGLKPDAVVYTSILS 442
+ L K+ +H+ L+PD Y +L+
Sbjct: 680 -HDVKLAEKVAEHIFELEPDNTRYYVVLA 707
>gi|357521733|ref|XP_003631155.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355525177|gb|AET05631.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 785
Score = 431 bits (1107), Expect = e-118, Method: Compositional matrix adjust.
Identities = 217/626 (34%), Positives = 365/626 (58%), Gaps = 7/626 (1%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MIR +G F++++ Y MLQ GV +FTFP +LKAC+++ ++ G+ +H+H +G
Sbjct: 78 MIRTYAWSGPFQQSIYLYLHMLQLGVTPTNFTFPFLLKACSSLQALQLGRLIHTHAHILG 137
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
D +V T L+ MY+KC ++ + + + + R +V+WN++I+A S L+ + I
Sbjct: 138 LSMDLYVSTALLHMYAKCGHLYQAQTLFNSISHQDRDIVAWNAMIAAFSFHALHAQTIHS 197
Query: 121 LKEMWVLGLELSASTFVSVV----SGCSFRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
+ +M G+ ++ST VS++ + QG ++H Y + + L +++ MYA
Sbjct: 198 VAQMQQAGVTPNSSTLVSILPTIGQANALHQGKAIHA-YYIRNFFFDNVVLQTALLDMYA 256
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRM-SVTPDLVVFL 235
K + AR IF+ + + + V W+ +IGGYV ++++A L + M + + P
Sbjct: 257 KCHLLFYARKIFNTVNKKNDVCWSAMIGGYVLHDSISDALALYDDMLCIYGLNPTPATLA 316
Query: 236 NLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEK 295
++ CAQ+ +L +H ++KSG + + + N L+SMY KCG ++ A D ++ K
Sbjct: 317 TMLRACAQLTDLKRGKKLHCHMIKSGMDLDTTVGNSLISMYAKCGIMDNAVGFLDEMIAK 376
Query: 296 SVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIE 355
++++I G Q GY +A+ +F+++ + + P T+ L AC+ L +L G
Sbjct: 377 DTVSYSAIISGCVQNGYAEKALLIFRQMQSSGIAPYLETMIALLPACSHLAALQHGTCCH 436
Query: 356 EYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGD 415
Y V+ G ++ + ++I M+SKCG+I ++E+F+R+ ++D+ W+ MI GY IHG+
Sbjct: 437 GYTVVRGFTNDTSICNAIIDMYSKCGKITISREIFDRMQNRDIISWNTMIIGYGIHGLCV 496
Query: 416 QALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLC 475
+AL+LF ++Q + GLKPD V ++LSACSHSG+V +G +F SM NF I+P + HY+C
Sbjct: 497 EALSLFQELQAL-GLKPDDVTLIAVLSACSHSGLVTEGKYWFSSMSQNFNIKPRMAHYIC 555
Query: 476 LVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGS 535
+VDLL RAG D A I MP ++W LL+AC H N+E+GE +K + L P
Sbjct: 556 MVDLLARAGNLDEAYTFIQRMPFVPNVRIWGALLAACRTHKNIEMGEQVSKKIQLLGPEG 615
Query: 536 TGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLS 595
TGN++LM+N+++S G W +AA R + K PG S VEI G + VF+ G +SH S
Sbjct: 616 TGNFVLMSNIYSSVGRWDDAAYIRSIQRHHGYKKSPGCSWVEISGVIHVFIGGHQSHPQS 675
Query: 596 VDIRKTLKELHIKLLEAGYIAEADIV 621
I K L+EL +++ + GY A++ V
Sbjct: 676 ASINKKLQELLVQMKKLGYRADSSFV 701
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 138/523 (26%), Positives = 251/523 (47%), Gaps = 60/523 (11%)
Query: 84 SRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGC 143
+R V D++P SVV WN +I ++ + ++I + M LG+ + TF ++ C
Sbjct: 60 ARHVFDQIPKP--SVVLWNMMIRTYAWSGPFQQSIYLYLHMLQLGVTPTNFTFPFLLKAC 117
Query: 144 SFRQGISM----HCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIG--ETSIV 197
S Q + + H + LG L+ ++ ++ +++ MYAK G + +A+++F+ I + IV
Sbjct: 118 SSLQALQLGRLIHTHAHILG-LSMDLYVSTALLHMYAKCGHLYQAQTLFNSISHQDRDIV 176
Query: 198 SWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLL 257
+W +I + + QM++ VTP+ ++++ Q L ++H+
Sbjct: 177 AWNAMIAAFSFHALHAQTIHSVAQMQQAGVTPNSSTLVSILPTIGQANALHQGKAIHAYY 236
Query: 258 LKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAV 317
+++ + + L L+ MY KC L AR++F+ V +K+ W++MIGGY S+A+
Sbjct: 237 IRNFFFDNVVLQTALLDMYAKCHLLFYARKIFNTVNKKNDVCWSAMIGGYVLHDSISDAL 296
Query: 318 NLFKRLLKT-SVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHM 376
L+ +L + P ATLAT L ACA+L L +GK++ +++ +G++ + V SLI M
Sbjct: 297 ALYDDMLCIYGLNPTPATLATMLRACAQLTDLKRGKKLHCHMIKSGMDLDTTVGNSLISM 356
Query: 377 FSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVV 436
++KCG ++ A + + KD +SA+I+G +G ++AL +F +MQ G+ P
Sbjct: 357 YAKCGIMDNAVGFLDEMIAKDTVSYSAIISGCVQNGYAEKALLIFRQMQ-SSGIAPYLET 415
Query: 437 YTSILSACSH-----SGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALK 491
++L ACSH G G + + ++ I +I +D+ + G+ ++ +
Sbjct: 416 MIALLPACSHLAALQHGTCCHGYTVVRGFTNDTSICNAI------IDMYSKCGKITISRE 469
Query: 492 T--------------------IHEMPV-------EVQAQVWAP-------LLSACMKHHN 517
IH + V E+QA P +LSAC
Sbjct: 470 IFDRMQNRDIISWNTMIIGYGIHGLCVEALSLFQELQALGLKPDDVTLIAVLSACSHSGL 529
Query: 518 VELGEYAAKNL---LTLNPGSTGNYILMANLFTSAGMWKEAAT 557
V G+Y ++ + P +YI M +L AG EA T
Sbjct: 530 VTEGKYWFSSMSQNFNIKP-RMAHYICMVDLLARAGNLDEAYT 571
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 92/353 (26%), Positives = 171/353 (48%), Gaps = 12/353 (3%)
Query: 180 KVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLIL 239
++ AR +FD+I + S+V W +I Y G ++ L M ++ VTP F L+
Sbjct: 56 EIQLARHVFDQIPKPSVVLWNMMIRTYAWSGPFQQSIYLYLHMLQLGVTPTNFTFPFLLK 115
Query: 240 GCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAV--LEKSV 297
C+ + L L +H+ G + + + L+ MY KCG L A+ +F+++ ++ +
Sbjct: 116 ACSSLQALQLGRLIHTHAHILGLSMDLYVSTALLHMYAKCGHLYQAQTLFNSISHQDRDI 175
Query: 298 FLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEY 357
W +MI ++ ++ ++ ++ + V PN +TL + L + +L +GK I Y
Sbjct: 176 VAWNAMIAAFSFHALHAQTIHSVAQMQQAGVTPNSSTLVSILPTIGQANALHQGKAIHAY 235
Query: 358 IVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQA 417
+ N N +QT+L+ M++KC + A+++F V K+ WSAMI GY +H A
Sbjct: 236 YIRNFFFDNVVLQTALLDMYAKCHLLFYARKIFNTVNKKNDVCWSAMIGGYVLHDSISDA 295
Query: 418 LNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSM-QSNFGIEPSIEHYLCL 476
L L+ M + GL P ++L AC+ + G M +S ++ ++ + L
Sbjct: 296 LALYDDMLCIYGLNPTPATLATMLRACAQLTDLKRGKKLHCHMIKSGMDLDTTVGN--SL 353
Query: 477 VDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLL 529
+ + + G D A+ + EM + ++ ++S C++ YA K LL
Sbjct: 354 ISMYAKCGIMDNAVGFLDEM-IAKDTVSYSAIISGCVQ------NGYAEKALL 399
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 103/204 (50%), Gaps = 3/204 (1%)
Query: 263 NNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKR 322
++ D L + +++LAR VFD + + SV LW MI YA G +++ L+
Sbjct: 38 SDSDAAATQLARYHISRNEIQLARHVFDQIPKPSVVLWNMMIRTYAWSGPFQQSIYLYLH 97
Query: 323 LLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGR 382
+L+ V P T L AC+ L +L G+ I + + GL + V T+L+HM++KCG
Sbjct: 98 MLQLGVTPTNFTFPFLLKACSSLQALQLGRLIHTHAHILGLSMDLYVSTALLHMYAKCGH 157
Query: 383 INKAKEVFERVP--DKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSI 440
+ +A+ +F + D+D+ W+AMI ++ H + Q ++ +MQ G+ P++ SI
Sbjct: 158 LYQAQTLFNSISHQDRDIVAWNAMIAAFSFHALHAQTIHSVAQMQQA-GVTPNSSTLVSI 216
Query: 441 LSACSHSGMVDDGLSFFKSMQSNF 464
L + + G + NF
Sbjct: 217 LPTIGQANALHQGKAIHAYYIRNF 240
>gi|115446089|ref|NP_001046824.1| Os02g0468800 [Oryza sativa Japonica Group]
gi|47497329|dbj|BAD19370.1| selenium binding protein-like protein [Oryza sativa Japonica Group]
gi|113536355|dbj|BAF08738.1| Os02g0468800 [Oryza sativa Japonica Group]
gi|125582005|gb|EAZ22936.1| hypothetical protein OsJ_06625 [Oryza sativa Japonica Group]
Length = 603
Score = 430 bits (1106), Expect = e-117, Method: Compositional matrix adjust.
Identities = 241/585 (41%), Positives = 366/585 (62%), Gaps = 8/585 (1%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSF-TFPLVLKACANINSIWDGKRVHSHVLKV 59
+I+++ +GS+ L Y+S+L G+ G TFP + K+CA + G VH+H L
Sbjct: 22 LIQHAAASGSYSRCLRHYASLLAAGLGGGGASTFPSLAKSCAALRLPRLGAAVHAHALLA 81
Query: 60 GFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAIL 119
G FV+T L+DMY+KC +R++ DEMP ++VSWN +++A+ R+ +E++
Sbjct: 82 GAASAVFVRTSLLDMYAKCGRLPDARRLFDEMP--RPTLVSWNCMVAAYGRSSQVEESVA 139
Query: 120 VLKEMWVLGLELSASTFVSVVSGCSFRQGIS-MHCCVYKLGL---LNNEIPLANSVMSMY 175
V M G+ S T V V+SGC S CVY + L+ +P+ NSV++M
Sbjct: 140 VFNAMRRAGVRPSEGTLVGVLSGCVDSVSASNPGMCVYGFSVKSGLDAGLPVLNSVLTML 199
Query: 176 AKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFL 235
+ ++ AR +FD I S+V+WT + GY+ G+ E F L N+MR + D VV +
Sbjct: 200 VRGSHLDAARLLFDGICNKSVVTWTALASGYLLRGDYLEVFDLFNRMRGVGKNVDSVVLV 259
Query: 236 NLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEK 295
NLI GNL +A +H+L++K G+ E+ L L+++Y KCGDLE AR VFDAV
Sbjct: 260 NLISAAVLFGNLSVAKGVHALIIKLGFECEEDLAASLINLYAKCGDLESAREVFDAVHMA 319
Query: 296 SVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIE 355
+V +WTSMI GY + G+ +EA+ +F ++ ++ PNEATL++ LSACA+LGS + GK++E
Sbjct: 320 NVVVWTSMISGYVEGGHLNEALVMFDSMVCANIEPNEATLSSVLSACAKLGSANLGKKVE 379
Query: 356 EYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGD 415
E + GL S +V T LI M+SK G IN A+++FE V ++D+AVWSAMINGYA +G G
Sbjct: 380 EQAIATGLHSEPRVATGLIDMYSKFGSINLARKIFEGVTNRDIAVWSAMINGYACNGEGS 439
Query: 416 QALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLC 475
+AL LF +M++ +G +PD + +T +L+AC++SG+VD+GL F SM +GIEPSIEH++C
Sbjct: 440 EALVLFKEMKN-KGFQPDGIAFTHVLTACNYSGLVDEGLECFHSMTMEYGIEPSIEHHMC 498
Query: 476 LVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGS 535
+VDLL +AG F ALK +MP EVQ +V AP++S+ ++ + LL L
Sbjct: 499 MVDLLCKAGHFGSALKFFKQMPSEVQNKVLAPIISSYSARCADSSIDFIPEELLNLETQD 558
Query: 536 TGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDG 580
+ + +LM+N+ + G WK+A + R + + L KEPGWS +E+ G
Sbjct: 559 SDHCVLMSNMLSCLGKWKKATSYRRQLSKQGLMKEPGWSCIELSG 603
>gi|218190710|gb|EEC73137.1| hypothetical protein OsI_07160 [Oryza sativa Indica Group]
Length = 603
Score = 430 bits (1106), Expect = e-117, Method: Compositional matrix adjust.
Identities = 241/585 (41%), Positives = 366/585 (62%), Gaps = 8/585 (1%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSF-TFPLVLKACANINSIWDGKRVHSHVLKV 59
+I+++ +GS+ L Y+S+L G+ G TFP + K+CA + G VH+H L
Sbjct: 22 LIQHAAASGSYSRCLRHYASLLAAGLGGGGASTFPSLAKSCAALRLPRLGAAVHAHALLA 81
Query: 60 GFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAIL 119
G FV+T L+DMY+KC +R++ DEMP ++VSWN +++A+ R+ +E++
Sbjct: 82 GAASAVFVRTSLLDMYAKCGRLPDARRLFDEMP--RPTLVSWNCMVAAYGRSSQVEESVA 139
Query: 120 VLKEMWVLGLELSASTFVSVVSGCSFRQGIS-MHCCVYKLGL---LNNEIPLANSVMSMY 175
V M G+ S T V V+SGC S CVY + L+ +P+ NSV++M
Sbjct: 140 VFNAMRRAGVRPSEGTLVGVLSGCVDSVSASNPGMCVYGFSVKSGLDAGLPVLNSVLTML 199
Query: 176 AKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFL 235
+ ++ AR +FD I S+V+WT + GY+ G+ E F L N+MR + D VV +
Sbjct: 200 VRGSHLDAARLLFDGICNKSVVTWTALASGYLLRGDYLEVFDLFNRMRGVGQNVDSVVLV 259
Query: 236 NLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEK 295
NLI GNL +A +H+L++K G+ E+ L L+++Y KCGDLE AR VFDAV
Sbjct: 260 NLISAAVLFGNLSVAKGVHALIIKLGFECEEDLAASLINLYAKCGDLESAREVFDAVHMA 319
Query: 296 SVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIE 355
+V +WTSMI GY + G+ +EA+ +F ++ ++ PNEATL++ LSACA+LGS + GK++E
Sbjct: 320 NVVVWTSMISGYVEGGHLNEALVMFDSMVCANIEPNEATLSSVLSACAKLGSANLGKKVE 379
Query: 356 EYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGD 415
E + GL S +V T LI M+SK G IN A+++FE V ++D+AVWSAMINGYA +G G
Sbjct: 380 EQAIATGLHSEPRVATGLIDMYSKFGSINLARKIFEGVTNRDIAVWSAMINGYACNGEGS 439
Query: 416 QALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLC 475
+AL LF +M++ +G +PD + +T +L+AC++SG+VD+GL F SM +GIEPSIEH++C
Sbjct: 440 EALVLFKEMKN-KGFQPDGIAFTHVLTACNYSGLVDEGLECFHSMTMEYGIEPSIEHHMC 498
Query: 476 LVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGS 535
+VDLL +AG F ALK +MP EVQ +V AP++S+ ++ + LL L
Sbjct: 499 MVDLLCKAGHFGSALKFFKQMPSEVQNKVLAPIISSYSARCADSSIDFIPEELLNLETQD 558
Query: 536 TGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDG 580
+ + +LM+N+ + G WK+A + R + + L KEPGWS +E+ G
Sbjct: 559 SDHCVLMSNMLSCLGKWKKATSYRRQLSKQGLMKEPGWSCIELSG 603
>gi|357475445|ref|XP_003608008.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355509063|gb|AES90205.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1183
Score = 428 bits (1100), Expect = e-117, Method: Compositional matrix adjust.
Identities = 220/611 (36%), Positives = 360/611 (58%), Gaps = 7/611 (1%)
Query: 9 GSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQ 68
G+F E++S + M + GV GN +TF VLK A + + + KRVH +VLK+GF + V
Sbjct: 449 GNFRESVSLFKKMQKLGVVGNCYTFTCVLKCFAALGKVKECKRVHGYVLKLGFGSNTAVV 508
Query: 69 TGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLG 128
LI Y K S+ + DE+ VVSWNS+I+ + + + +M +LG
Sbjct: 509 NSLIAAYFKFGGVESAHNLFDELSEP--DVVSWNSMINGCVVNGFSGNGLEIFIQMLILG 566
Query: 129 LELSASTFVSVVSGCSFRQGISMHCCVYKLGL---LNNEIPLANSVMSMYAKFGKVNEAR 185
+E+ +T VSV+ + +S+ ++ G+ + E+ +N+++ MY+K G +N A
Sbjct: 567 VEVDLTTLVSVLVAWANIGNLSLGRALHGFGVKACFSEEVVFSNTLLDMYSKCGNLNGAT 626
Query: 186 SIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVG 245
+F ++G+T+IVSWT+ I YV G ++A GL ++M+ V PD+ +++ CA
Sbjct: 627 EVFVKMGDTTIVSWTSTIAAYVREGLYSDAIGLFDEMQSKGVRPDIYTVTSIVHACACSS 686
Query: 246 NLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIG 305
+L +HS ++K+G + P+ N L++MY KCG +E AR VF + K + W +MIG
Sbjct: 687 SLDKGRDVHSYVIKNGMGSNLPVTNALINMYAKCGSVEEARLVFSKIPVKDIVSWNTMIG 746
Query: 306 GYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLES 365
GY+Q P+EA+ LF + K +P++ T+A L ACA L +L KG+EI +I+ G S
Sbjct: 747 GYSQNSLPNEALELFLDMQK-QFKPDDITMACVLPACAGLAALDKGREIHGHILRRGYFS 805
Query: 366 NRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQ 425
+ V +L+ M++KCG + A+ +F+ +P KDL W+ MI GY +HG G++A++ F +M+
Sbjct: 806 DLHVACALVDMYAKCGLLVLAQLLFDMIPKKDLISWTVMIAGYGMHGFGNEAISTFNEMR 865
Query: 426 HVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGR 485
+ G++PD ++ IL+ACSHSG++++G FF SM++ G+EP +EHY C+VDLL R G
Sbjct: 866 -IAGIEPDESSFSVILNACSHSGLLNEGWKFFNSMRNECGVEPKLEHYACVVDLLARMGN 924
Query: 486 FDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANL 545
A K I MP++ +W LLS C HH+V+L E A+++ L P +T Y+++AN+
Sbjct: 925 LSKAYKFIESMPIKPDTTIWGVLLSGCRIHHDVKLAEKVAEHIFELEPDNTRYYVVLANV 984
Query: 546 FTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKEL 605
+ A W+E R M R + PG S +E+ G +FVAG+ H + I L++L
Sbjct: 985 YAEAEKWEEVKKLRKRMQKRGFKQNPGCSWIEVGGKFNIFVAGNSKHPQAKRIDVLLRKL 1044
Query: 606 HIKLLEAGYIA 616
+++ Y +
Sbjct: 1045 TMQMQNEDYFS 1055
Score = 252 bits (644), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 155/488 (31%), Positives = 255/488 (52%), Gaps = 25/488 (5%)
Query: 6 TNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDA 65
T + S+E L++Y S+LQ CA S+ DGKRVHS ++ G D
Sbjct: 360 TKSKSYELGLNSYCSVLQL---------------CAEKKSLEDGKRVHSVIISNGISIDE 404
Query: 66 FVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMW 125
+ L+ MY C D V RK+ D+ + V WN ++S +++ E++ + K+M
Sbjct: 405 ALGAKLVFMYVNCGDLVQGRKIFDK--IMNDKVFLWNLLMSEYAKIGNFRESVSLFKKMQ 462
Query: 126 VLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKV 181
LG+ + TF V+ + ++ +H V KLG +N + NS+++ Y KFG V
Sbjct: 463 KLGVVGNCYTFTCVLKCFAALGKVKECKRVHGYVLKLGFGSN-TAVVNSLIAAYFKFGGV 521
Query: 182 NEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGC 241
A ++FDE+ E +VSW ++I G V G + QM + V DL +++++
Sbjct: 522 ESAHNLFDELSEPDVVSWNSMINGCVVNGFSGNGLEIFIQMLILGVEVDLTTLVSVLVAW 581
Query: 242 AQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWT 301
A +GNL L ++H +K+ ++ E N L+ MY+KCG+L A VF + + ++ WT
Sbjct: 582 ANIGNLSLGRALHGFGVKACFSEEVVFSNTLLDMYSKCGNLNGATEVFVKMGDTTIVSWT 641
Query: 302 SMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLN 361
S I Y + G S+A+ LF + VRP+ T+ + + ACA SL KG+++ Y++ N
Sbjct: 642 STIAAYVREGLYSDAIGLFDEMQSKGVRPDIYTVTSIVHACACSSSLDKGRDVHSYVIKN 701
Query: 362 GLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLF 421
G+ SN V +LI+M++KCG + +A+ VF ++P KD+ W+ MI GY+ + + ++AL LF
Sbjct: 702 GMGSNLPVTNALINMYAKCGSVEEARLVFSKIPVKDIVSWNTMIGGYSQNSLPNEALELF 761
Query: 422 YKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLG 481
MQ + KPD + +L AC+ +D G + G + LVD+
Sbjct: 762 LDMQ--KQFKPDDITMACVLPACAGLAALDKGREIHGHILRR-GYFSDLHVACALVDMYA 818
Query: 482 RAGRFDLA 489
+ G LA
Sbjct: 819 KCGLLVLA 826
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 142/449 (31%), Positives = 230/449 (51%), Gaps = 15/449 (3%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI NG L + ML GV + T VL A ANI ++ G+ +H +K
Sbjct: 542 MINGCVVNGFSGNGLEIFIQMLILGVEVDLTTLVSVLVAWANIGNLSLGRALHGFGVKAC 601
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F ++ L+DMYSKC + + +V +M ++VSW S I+A+ R L +AI +
Sbjct: 602 FSEEVVFSNTLLDMYSKCGNLNGATEVFVKMGD--TTIVSWTSTIAAYVREGLYSDAIGL 659
Query: 121 LKEMWVLGLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
EM G+ T S+V C S +G +H V K G+ +N +P+ N++++MYA
Sbjct: 660 FDEMQSKGVRPDIYTVTSIVHACACSSSLDKGRDVHSYVIKNGMGSN-LPVTNALINMYA 718
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K G V EAR +F +I IVSW T+IGGY NEA L M++ PD +
Sbjct: 719 KCGSVEEARLVFSKIPVKDIVSWNTMIGGYSQNSLPNEALELFLDMQK-QFKPDDITMAC 777
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
++ CA + L +H +L+ GY ++ + LV MY KCG L LA+ +FD + +K
Sbjct: 778 VLPACAGLAALDKGREIHGHILRRGYFSDLHVACALVDMYAKCGLLVLAQLLFDMIPKKD 837
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKG-KEIE 355
+ WT MI GY G+ +EA++ F + + P+E++ + L+AC+ G L++G K
Sbjct: 838 LISWTVMIAGYGMHGFGNEAISTFNEMRIAGIEPDESSFSVILNACSHSGLLNEGWKFFN 897
Query: 356 EYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDK-DLAVWSAMINGYAIHGMG 414
G+E + ++ + ++ G ++KA + E +P K D +W +++G IH
Sbjct: 898 SMRNECGVEPKLEHYACVVDLLARMGNLSKAYKFIESMPIKPDTTIWGVLLSGCRIH--- 954
Query: 415 DQALNLFYKM-QHVEGLKPDAVVYTSILS 442
+ L K+ +H+ L+PD Y +L+
Sbjct: 955 -HDVKLAEKVAEHIFELEPDNTRYYVVLA 982
>gi|147790745|emb|CAN61464.1| hypothetical protein VITISV_005683 [Vitis vinifera]
Length = 785
Score = 425 bits (1093), Expect = e-116, Method: Compositional matrix adjust.
Identities = 233/627 (37%), Positives = 368/627 (58%), Gaps = 11/627 (1%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+IR NG F+ + Y SML GV N +T+P VLKAC+ + +I DG +HSH G
Sbjct: 80 IIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVEIHSHAKMFG 139
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+ D FV T L+D Y+KC V ++++ M R VV+WN++I+ S L D+A+ +
Sbjct: 140 LESDVFVCTALVDFYAKCGILVEAQRLFSSMS--HRDVVAWNAMIAGCSLYGLCDDAVQL 197
Query: 121 LKEMWVLGLELSASTFVSVVSGC----SFRQGISMH-CCVYKLGLLNNEIPLANSVMSMY 175
+ +M G+ ++ST V V+ + G ++H CV + +N + + ++ MY
Sbjct: 198 IMQMQEEGICPNSSTIVGVLPTVGEAKALGHGKALHGYCVRRS--FDNGVVVGTGLLDMY 255
Query: 176 AKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQM-RRMSVTPDLVVF 234
AK + AR IFD +G + VSW+ +IGGYV + EA L +QM + ++ P V
Sbjct: 256 AKCQCLLYARKIFDVMGVRNEVSWSAMIGGYVXSDCMKEALELFDQMILKDAMDPTPVTL 315
Query: 235 LNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLE 294
+++ CA++ +L +H ++K G + L N L+SMY KCG ++ A R FD +
Sbjct: 316 GSVLRACAKLTDLSRGRKLHCYIIKLGXVLDILLGNTLLSMYAKCGVIDDAIRFFDXMNP 375
Query: 295 KSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEI 354
K +++++ G Q G + A+++F+ + + + P+ T+ L AC+ L +L G
Sbjct: 376 KDSVSFSAIVSGCVQNGNAAVALSIFRMMQLSGIDPDLTTMLGVLPACSHLAALQHGFCS 435
Query: 355 EEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMG 414
Y+++ G ++ + +LI M+SKCG+I+ A+EVF R+ D+ W+AMI GY IHG+G
Sbjct: 436 HGYLIVRGFATDTLICNALIDMYSKCGKISFAREVFNRMDRHDIVSWNAMIIGYGIHGLG 495
Query: 415 DQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYL 474
+AL LF+ + + GLKPD + + +LS+CSHSG+V +G +F +M +F I P +EH +
Sbjct: 496 MEALGLFHDLLAL-GLKPDDITFICLLSSCSHSGLVMEGRLWFDAMSRDFSIVPRMEHCI 554
Query: 475 CLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPG 534
C+VD+LGRAG D A I MP E ++W+ LLSAC H N+ELGE +K + +L P
Sbjct: 555 CMVDILGRAGLIDEAHHFIRNMPFEPDVRIWSALLSACRIHKNIELGEEVSKKIQSLGPE 614
Query: 535 STGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHL 594
STGN++L++N++++AG W +AA R D L K PG S +EI+G V FV GD+SH
Sbjct: 615 STGNFVLLSNIYSAAGRWDDAAHIRITQKDWGLKKIPGCSWIEINGIVHAFVGGDQSHLQ 674
Query: 595 SVDIRKTLKELHIKLLEAGYIAEADIV 621
I + L+EL +++ GY AE V
Sbjct: 675 LSQINRKLEELLVEMKRLGYQAECSFV 701
Score = 199 bits (506), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 132/467 (28%), Positives = 234/467 (50%), Gaps = 12/467 (2%)
Query: 36 VLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRL 95
+L+AC S+ + K++H H LK D+ V L +Y C+ V +R++ DE+P
Sbjct: 14 LLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIPN-- 71
Query: 96 RSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCS----FRQGISM 151
SV+ WN II A++ D AI + M LG+ + T+ V+ CS G+ +
Sbjct: 72 PSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVEI 131
Query: 152 HCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGN 211
H G L +++ + +++ YAK G + EA+ +F + +V+W +I G G
Sbjct: 132 HSHAKMFG-LESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGL 190
Query: 212 VNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNL 271
++A L QM+ + P+ + ++ + L ++H ++ ++N +
Sbjct: 191 CDDAVQLIMQMQEEGICPNSSTIVGVLPTVGEAKALGHGKALHGYCVRRSFDNGVVVGTG 250
Query: 272 LVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRL-LKTSVRP 330
L+ MY KC L AR++FD + ++ W++MIGGY EA+ LF ++ LK ++ P
Sbjct: 251 LLDMYAKCQCLLYARKIFDVMGVRNEVSWSAMIGGYVXSDCMKEALELFDQMILKDAMDP 310
Query: 331 NEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVF 390
TL + L ACA+L LS+G+++ YI+ G + + +L+ M++KCG I+ A F
Sbjct: 311 TPVTLGSVLRACAKLTDLSRGRKLHCYIIKLGXVLDILLGNTLLSMYAKCGVIDDAIRFF 370
Query: 391 ERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMV 450
+ + KD +SA+++G +G AL++F MQ + G+ PD +L ACSH +
Sbjct: 371 DXMNPKDSVSFSAIVSGCVQNGNAAVALSIFRMMQ-LSGIDPDLTTMLGVLPACSHLAAL 429
Query: 451 DDGL-SFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEM 496
G S + F + I + L+D+ + G+ A + + M
Sbjct: 430 QHGFCSHGYLIVRGFATDTLICN--ALIDMYSKCGKISFAREVFNRM 474
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 70/208 (33%), Positives = 117/208 (56%), Gaps = 1/208 (0%)
Query: 234 FLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVL 293
+L+L+ C Q +L A +H LK+ N + + + L +Y C + LARR+FD +
Sbjct: 11 YLHLLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIP 70
Query: 294 EKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKE 353
SV LW +I YA G A++L+ +L VRPN+ T L AC+ L ++ G E
Sbjct: 71 NPSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVE 130
Query: 354 IEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGM 413
I + + GLES+ V T+L+ ++KCG + +A+ +F + +D+ W+AMI G +++G+
Sbjct: 131 IHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGL 190
Query: 414 GDQALNLFYKMQHVEGLKPDAVVYTSIL 441
D A+ L +MQ EG+ P++ +L
Sbjct: 191 CDDAVQLIMQMQE-EGICPNSSTIVGVL 217
>gi|15234006|ref|NP_193610.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206861|sp|Q9SN39.1|PP320_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g18750, chloroplastic; Flags: Precursor
gi|4539394|emb|CAB37460.1| putative protein [Arabidopsis thaliana]
gi|7268669|emb|CAB78877.1| putative protein [Arabidopsis thaliana]
gi|332658686|gb|AEE84086.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 871
Score = 425 bits (1092), Expect = e-116, Method: Compositional matrix adjust.
Identities = 221/613 (36%), Positives = 356/613 (58%), Gaps = 7/613 (1%)
Query: 6 TNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDA 65
+G F ++ + M+ +GV +S+TF V K+ +++ S+ G+++H +LK GF +
Sbjct: 171 AKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERN 230
Query: 66 FVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMW 125
V L+ Y K S+RKV DEM R V+SWNSII+ + L ++ + V +M
Sbjct: 231 SVGNSLVAFYLKNQRVDSARKVFDEMTER--DVISWNSIINGYVSNGLAEKGLSVFVQML 288
Query: 126 VLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGL---LNNEIPLANSVMSMYAKFGKVN 182
V G+E+ +T VSV +GC+ + IS+ V+ +G+ + E N+++ MY+K G ++
Sbjct: 289 VSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLD 348
Query: 183 EARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCA 242
A+++F E+ + S+VS+T++I GY G EA L +M ++PD+ ++ CA
Sbjct: 349 SAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCA 408
Query: 243 QVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTS 302
+ L +H + ++ + + N L+ MY KCG ++ A VF + K + W +
Sbjct: 409 RYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNT 468
Query: 303 MIGGYAQLGYPSEAVNLFKRLLKTS-VRPNEATLATTLSACAELGSLSKGKEIEEYIVLN 361
+IGGY++ Y +EA++LF LL+ P+E T+A L ACA L + KG+EI YI+ N
Sbjct: 469 IIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRN 528
Query: 362 GLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLF 421
G S+R V SL+ M++KCG + A +F+ + KDL W+ MI GY +HG G +A+ LF
Sbjct: 529 GYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALF 588
Query: 422 YKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLG 481
+M+ G++ D + + S+L ACSHSG+VD+G FF M+ IEP++EHY C+VD+L
Sbjct: 589 NQMRQA-GIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLA 647
Query: 482 RAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYIL 541
R G A + I MP+ A +W LL C HH+V+L E A+ + L P +TG Y+L
Sbjct: 648 RTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKVFELEPENTGYYVL 707
Query: 542 MANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKT 601
MAN++ A W++ R + R L K PG S +EI G V +FVAGD S+ + +I
Sbjct: 708 MANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFVAGDSSNPETENIEAF 767
Query: 602 LKELHIKLLEAGY 614
L+++ +++E GY
Sbjct: 768 LRKVRARMIEEGY 780
Score = 226 bits (575), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 136/426 (31%), Positives = 230/426 (53%), Gaps = 7/426 (1%)
Query: 32 TFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEM 91
T VL+ CA+ S+ DGK V + + GF D+ + + L MY+ C D + +V DE
Sbjct: 96 TLCSVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDE- 154
Query: 92 PVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVV-SGCSFRQ--- 147
V++ + WN +++ +++ +I + K+M G+E+ + TF V S S R
Sbjct: 155 -VKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHG 213
Query: 148 GISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYV 207
G +H + K G + NS+++ Y K +V+ AR +FDE+ E ++SW +II GYV
Sbjct: 214 GEQLHGFILKSGF-GERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYV 272
Query: 208 NVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDP 267
+ G + + QM + DL +++ GCA + L ++HS+ +K+ ++ ED
Sbjct: 273 SNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDR 332
Query: 268 LDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTS 327
N L+ MY+KCGDL+ A+ VF + ++SV +TSMI GYA+ G EAV LF+ + +
Sbjct: 333 FCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEG 392
Query: 328 VRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAK 387
+ P+ T+ L+ CA L +GK + E+I N L + V +L+ M++KCG + +A+
Sbjct: 393 ISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAE 452
Query: 388 EVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHS 447
VF + KD+ W+ +I GY+ + ++AL+LF + + PD +L AC+
Sbjct: 453 LVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASL 512
Query: 448 GMVDDG 453
D G
Sbjct: 513 SAFDKG 518
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 92/206 (44%), Gaps = 6/206 (2%)
Query: 292 VLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKG 351
++SV + + + + G AV L K + P TL + L CA+ SL G
Sbjct: 56 TFDRSVTDANTQLRRFCESGNLENAVKLLCVSGKWDIDPR--TLCSVLQLCADSKSLKDG 113
Query: 352 KEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIH 411
KE++ +I NG + + + L M++ CG + +A VF+ V + W+ ++N A
Sbjct: 114 KEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMNELAKS 173
Query: 412 GMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKS-MQSNFGIEPSI 470
G ++ LF KM G++ D+ ++ + + S V G ++S FG S+
Sbjct: 174 GDFSGSIGLFKKMMS-SGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSV 232
Query: 471 EHYLCLVDLLGRAGRFDLALKTIHEM 496
+ LV + R D A K EM
Sbjct: 233 GN--SLVAFYLKNQRVDSARKVFDEM 256
>gi|359489786|ref|XP_002271725.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g16860-like [Vitis vinifera]
Length = 852
Score = 425 bits (1092), Expect = e-116, Method: Compositional matrix adjust.
Identities = 245/670 (36%), Positives = 367/670 (54%), Gaps = 55/670 (8%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+IR S + G E+ L Y M + G + +TFP VLKAC I S G VH+ V G
Sbjct: 97 LIRRSVHLGFLEDVLQLYRRMQRLGWRPDHYTFPFVLKACGEIPSFRCGASVHAVVFASG 156
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVR-LRSVVSWNSIISAHSRACLNDEAIL 119
F+ + FV GL+ MY +C + ++R+V DEM R + +VSWNSI++A+ + + A+
Sbjct: 157 FEWNVFVGNGLVSMYGRCGAWENARQVFDEMRERGVGDLVSWNSIVAAYMQGGDSIRAMK 216
Query: 120 VLKEMWV-LGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSM 174
+ + M LG+ A + V+V+ C+ + +G +H + GL ++ + N+V+ M
Sbjct: 217 MFERMTEDLGIRPDAVSLVNVLPACASVGAWSRGKQVHGYALRSGLFE-DVFVGNAVVDM 275
Query: 175 YAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLC--------------- 219
YAK G + EA +F+ + +VSW ++ GY +G ++A GL
Sbjct: 276 YAKCGMMEEANKVFERMKVKDVVSWNAMVTGYSQIGRFDDALGLFEKIREEKIELNVVTW 335
Query: 220 --------------------NQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLK 259
QMR P++V ++L+ GCA G L H +K
Sbjct: 336 SAVIAGYAQRGLGFEALDVFRQMRLCGSEPNVVTLVSLLSGCALAGTLLHGKETHCHAIK 395
Query: 260 SGYN--NEDPLDNL-----LVSMYTKCGDLELARRVFDAVLEK--SVFLWTSMIGGYAQL 310
N DP D+L L+ MY+KC + AR +FD + K SV WT +IGG AQ
Sbjct: 396 WILNLDENDPGDDLMVINALIDMYSKCKSPKAARAMFDLIPPKDRSVVTWTVLIGGNAQH 455
Query: 311 GYPSEAVNLFKRLLKTS--VRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQ 368
G +EA+ LF ++L+ V PN T++ L ACA LG+L G++I Y++ N ES
Sbjct: 456 GEANEALELFSQMLQPDNFVMPNAFTISCALMACARLGALRFGRQIHAYVLRNRFESAML 515
Query: 369 -VQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHV 427
V LI M+SK G ++ A+ VF+ + ++ W++++ GY +HG G++AL +FY+MQ V
Sbjct: 516 FVANCLIDMYSKSGDVDAARVVFDNMHQRNGVSWTSLMTGYGMHGRGEEALQIFYEMQKV 575
Query: 428 EGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFD 487
GL PD V + +L ACSHSGMVD G+++F M +FG+ P EHY C+VDLL RAGR D
Sbjct: 576 -GLVPDGVTFVVVLYACSHSGMVDQGINYFNGMNKDFGVVPGAEHYACMVDLLSRAGRLD 634
Query: 488 LALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFT 547
A++ I MP++ VW LLSAC + NVELGEYAA LL L G+ G+Y L++N++
Sbjct: 635 EAMELIRGMPMKPTPAVWVALLSACRVYANVELGEYAANQLLELESGNDGSYTLLSNIYA 694
Query: 548 SAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKELHI 607
+A WK+ A R LM + + K PG S V+ F AGD SH +S I L++L
Sbjct: 695 NARCWKDVARIRYLMKNTGIKKRPGCSWVQGRKGTATFFAGDWSHPMSQQIYDLLRDLMQ 754
Query: 608 KLLEAGYIAE 617
++ GY+ +
Sbjct: 755 RIKALGYVPD 764
Score = 181 bits (460), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 137/491 (27%), Positives = 220/491 (44%), Gaps = 57/491 (11%)
Query: 52 VHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRA 111
+H +L G D T +I MY + + VL + +V WN +I
Sbjct: 48 IHQQLLVQGLPHDP---THIISMYLTFNSPAKALSVLRRLHPSSHTVFWWNQLIRRSVHL 104
Query: 112 CLNDEAILVLKEMWVLGLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPL 167
++ + + + M LG TF V+ C SFR G S+H V+ G N + +
Sbjct: 105 GFLEDVLQLYRRMQRLGWRPDHYTFPFVLKACGEIPSFRCGASVHAVVFASGFEWN-VFV 163
Query: 168 ANSVMSMYAKFGKVNEARSIFDEIGETSI---VSWTTIIGGYVNVGNVNEAFGLCNQMRR 224
N ++SMY + G AR +FDE+ E + VSW +I+ Y+ G+ A + +M
Sbjct: 164 GNGLVSMYGRCGAWENARQVFDEMRERGVGDLVSWNSIVAAYMQGGDSIRAMKMFERMTE 223
Query: 225 -MSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLE 283
+ + PD V +N++ CA VG +H L+SG + + N +V MY KCG +E
Sbjct: 224 DLGIRPDAVSLVNVLPACASVGAWSRGKQVHGYALRSGLFEDVFVGNAVVDMYAKCGMME 283
Query: 284 LARRVFDAV-----------------------------------LEKSVFLWTSMIGGYA 308
A +VF+ + +E +V W+++I GYA
Sbjct: 284 EANKVFERMKVKDVVSWNAMVTGYSQIGRFDDALGLFEKIREEKIELNVVTWSAVIAGYA 343
Query: 309 QLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVL-------N 361
Q G EA+++F+++ PN TL + LS CA G+L GKE + + N
Sbjct: 344 QRGLGFEALDVFRQMRLCGSEPNVVTLVSLLSGCALAGTLLHGKETHCHAIKWILNLDEN 403
Query: 362 GLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAV--WSAMINGYAIHGMGDQALN 419
+ V +LI M+SKC A+ +F+ +P KD +V W+ +I G A HG ++AL
Sbjct: 404 DPGDDLMVINALIDMYSKCKSPKAARAMFDLIPPKDRSVVTWTVLIGGNAQHGEANEALE 463
Query: 420 LFYKM-QHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVD 478
LF +M Q + P+A + L AC+ G + G + N + CL+D
Sbjct: 464 LFSQMLQPDNFVMPNAFTISCALMACARLGALRFGRQIHAYVLRNRFESAMLFVANCLID 523
Query: 479 LLGRAGRFDLA 489
+ ++G D A
Sbjct: 524 MYSKSGDVDAA 534
>gi|62320406|dbj|BAD94843.1| putative protein [Arabidopsis thaliana]
Length = 720
Score = 425 bits (1092), Expect = e-116, Method: Compositional matrix adjust.
Identities = 221/613 (36%), Positives = 356/613 (58%), Gaps = 7/613 (1%)
Query: 6 TNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDA 65
+G F ++ + M+ +GV +S+TF V K+ +++ S+ G+++H +LK GF +
Sbjct: 20 AKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERN 79
Query: 66 FVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMW 125
V L+ Y K S+RKV DEM R V+SWNSII+ + L ++ + V +M
Sbjct: 80 SVGNSLVAFYLKNQRVDSARKVFDEMTER--DVISWNSIINGYVSNGLAEKGLSVFVQML 137
Query: 126 VLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGL---LNNEIPLANSVMSMYAKFGKVN 182
V G+E+ +T VSV +GC+ + IS+ V+ +G+ + E N+++ MY+K G ++
Sbjct: 138 VSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLD 197
Query: 183 EARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCA 242
A+++F E+ + S+VS+T++I GY G EA L +M ++PD+ ++ CA
Sbjct: 198 SAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCA 257
Query: 243 QVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTS 302
+ L +H + ++ + + N L+ MY KCG ++ A VF + K + W +
Sbjct: 258 RYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNT 317
Query: 303 MIGGYAQLGYPSEAVNLFKRLLKTS-VRPNEATLATTLSACAELGSLSKGKEIEEYIVLN 361
+IGGY++ Y +EA++LF LL+ P+E T+A L ACA L + KG+EI YI+ N
Sbjct: 318 IIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRN 377
Query: 362 GLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLF 421
G S+R V SL+ M++KCG + A +F+ + KDL W+ MI GY +HG G +A+ LF
Sbjct: 378 GYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALF 437
Query: 422 YKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLG 481
+M+ G++ D + + S+L ACSHSG+VD+G FF M+ IEP++EHY C+VD+L
Sbjct: 438 NQMRQA-GIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLA 496
Query: 482 RAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYIL 541
R G A + I MP+ A +W LL C HH+V+L E A+ + L P +TG Y+L
Sbjct: 497 RTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKVFELEPENTGYYVL 556
Query: 542 MANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKT 601
MAN++ A W++ R + R L K PG S +EI G V +FVAGD S+ + +I
Sbjct: 557 MANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFVAGDSSNPETENIEAF 616
Query: 602 LKELHIKLLEAGY 614
L+++ +++E GY
Sbjct: 617 LRKVRARMIEEGY 629
Score = 196 bits (497), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 115/365 (31%), Positives = 198/365 (54%), Gaps = 5/365 (1%)
Query: 93 VRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVV-SGCSFRQ---G 148
V++ + WN +++ +++ +I + K+M G+E+ + TF V S S R G
Sbjct: 4 VKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGG 63
Query: 149 ISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVN 208
+H + K G + NS+++ Y K +V+ AR +FDE+ E ++SW +II GYV+
Sbjct: 64 EQLHGFILKSGF-GERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVS 122
Query: 209 VGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPL 268
G + + QM + DL +++ GCA + L ++HS+ +K+ ++ ED
Sbjct: 123 NGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRF 182
Query: 269 DNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSV 328
N L+ MY+KCGDL+ A+ VF + ++SV +TSMI GYA+ G EAV LF+ + + +
Sbjct: 183 CNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGI 242
Query: 329 RPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKE 388
P+ T+ L+ CA L +GK + E+I N L + V +L+ M++KCG + +A+
Sbjct: 243 SPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAEL 302
Query: 389 VFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSG 448
VF + KD+ W+ +I GY+ + ++AL+LF + + PD +L AC+
Sbjct: 303 VFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLS 362
Query: 449 MVDDG 453
D G
Sbjct: 363 AFDKG 367
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 114/213 (53%), Gaps = 12/213 (5%)
Query: 289 FDAV-LEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGS 347
FD V +EK++F W ++ A+ G S ++ LFK+++ + V + T + + + L S
Sbjct: 1 FDEVKIEKALF-WNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRS 59
Query: 348 LSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMING 407
+ G+++ +I+ +G V SL+ + K R++ A++VF+ + ++D+ W+++ING
Sbjct: 60 VHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIING 119
Query: 408 YAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIE 467
Y +G+ ++ L++F +M V G++ D S+ + C+ S ++ G + + G++
Sbjct: 120 YVSNGLAEKGLSVFVQML-VSGIEIDLATIVSVFAGCADSRLISLGRAV-----HSIGVK 173
Query: 468 P--SIEHYLC--LVDLLGRAGRFDLALKTIHEM 496
S E C L+D+ + G D A EM
Sbjct: 174 ACFSREDRFCNTLLDMYSKCGDLDSAKAVFREM 206
>gi|225464281|ref|XP_002271266.1| PREDICTED: pentatricopeptide repeat-containing protein At3g16610
[Vitis vinifera]
Length = 785
Score = 424 bits (1090), Expect = e-116, Method: Compositional matrix adjust.
Identities = 233/627 (37%), Positives = 368/627 (58%), Gaps = 11/627 (1%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+IR NG F+ + Y SML GV N +T+P VLKAC+ + +I DG +HSH G
Sbjct: 80 IIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVEIHSHAKMFG 139
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+ D FV T L+D Y+KC V ++++ M R VV+WN++I+ S L D+A+ +
Sbjct: 140 LESDVFVCTALVDFYAKCGILVEAQRLFSSMS--HRDVVAWNAMIAGCSLYGLCDDAVQL 197
Query: 121 LKEMWVLGLELSASTFVSVVSGC----SFRQGISMH-CCVYKLGLLNNEIPLANSVMSMY 175
+ +M G+ ++ST V V+ + G ++H CV + +N + + ++ MY
Sbjct: 198 IMQMQEEGICPNSSTIVGVLPTVGEAKALGHGKALHGYCVRRS--FDNGVVVGTGLLDMY 255
Query: 176 AKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQM-RRMSVTPDLVVF 234
AK + AR IFD +G + VSW+ +IGGYV + EA L +QM + ++ P V
Sbjct: 256 AKCQCLLYARKIFDVMGVRNEVSWSAMIGGYVASDCMKEALELFDQMILKDAMDPTPVTL 315
Query: 235 LNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLE 294
+++ CA++ +L +H ++K G + L N L+SMY KCG ++ A R FD +
Sbjct: 316 GSVLRACAKLTDLSRGRKLHCYIIKLGSVLDILLGNTLLSMYAKCGVIDDAIRFFDEMNP 375
Query: 295 KSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEI 354
K +++++ G Q G + A+++F+ + + + P+ T+ L AC+ L +L G
Sbjct: 376 KDSVSFSAIVSGCVQNGNAAVALSIFRMMQLSGIDPDLTTMLGVLPACSHLAALQHGFCS 435
Query: 355 EEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMG 414
Y+++ G ++ + +LI M+SKCG+I+ A+EVF R+ D+ W+AMI GY IHG+G
Sbjct: 436 HGYLIVRGFATDTLICNALIDMYSKCGKISFAREVFNRMDRHDIVSWNAMIIGYGIHGLG 495
Query: 415 DQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYL 474
+AL LF+ + + GLKPD + + +LS+CSHSG+V +G +F +M +F I P +EH +
Sbjct: 496 MEALGLFHDLLAL-GLKPDDITFICLLSSCSHSGLVMEGRLWFDAMSRDFSIVPRMEHCI 554
Query: 475 CLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPG 534
C+VD+LGRAG D A I MP E ++W+ LLSAC H N+ELGE +K + +L P
Sbjct: 555 CMVDILGRAGLIDEAHHFIRNMPFEPDVRIWSALLSACRIHKNIELGEEVSKKIQSLGPE 614
Query: 535 STGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHL 594
STGN++L++N++++AG W +AA R D L K PG S +EI+G V FV GD+SH
Sbjct: 615 STGNFVLLSNIYSAAGRWDDAAHIRITQKDWGLKKIPGCSWIEINGIVHAFVGGDQSHLQ 674
Query: 595 SVDIRKTLKELHIKLLEAGYIAEADIV 621
I + L+EL +++ GY AE V
Sbjct: 675 LSQINRKLEELLVEMKRLGYQAECSFV 701
Score = 198 bits (504), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 132/467 (28%), Positives = 234/467 (50%), Gaps = 12/467 (2%)
Query: 36 VLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRL 95
+L+AC S+ + K++H H LK D+ V L +Y C+ V +R++ DE+P
Sbjct: 14 LLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIPN-- 71
Query: 96 RSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCS----FRQGISM 151
SV+ WN II A++ D AI + M LG+ + T+ V+ CS G+ +
Sbjct: 72 PSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVEI 131
Query: 152 HCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGN 211
H G L +++ + +++ YAK G + EA+ +F + +V+W +I G G
Sbjct: 132 HSHAKMFG-LESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGL 190
Query: 212 VNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNL 271
++A L QM+ + P+ + ++ + L ++H ++ ++N +
Sbjct: 191 CDDAVQLIMQMQEEGICPNSSTIVGVLPTVGEAKALGHGKALHGYCVRRSFDNGVVVGTG 250
Query: 272 LVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRL-LKTSVRP 330
L+ MY KC L AR++FD + ++ W++MIGGY EA+ LF ++ LK ++ P
Sbjct: 251 LLDMYAKCQCLLYARKIFDVMGVRNEVSWSAMIGGYVASDCMKEALELFDQMILKDAMDP 310
Query: 331 NEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVF 390
TL + L ACA+L LS+G+++ YI+ G + + +L+ M++KCG I+ A F
Sbjct: 311 TPVTLGSVLRACAKLTDLSRGRKLHCYIIKLGSVLDILLGNTLLSMYAKCGVIDDAIRFF 370
Query: 391 ERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMV 450
+ + KD +SA+++G +G AL++F MQ + G+ PD +L ACSH +
Sbjct: 371 DEMNPKDSVSFSAIVSGCVQNGNAAVALSIFRMMQ-LSGIDPDLTTMLGVLPACSHLAAL 429
Query: 451 DDGL-SFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEM 496
G S + F + I + L+D+ + G+ A + + M
Sbjct: 430 QHGFCSHGYLIVRGFATDTLICN--ALIDMYSKCGKISFAREVFNRM 474
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 70/208 (33%), Positives = 117/208 (56%), Gaps = 1/208 (0%)
Query: 234 FLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVL 293
+L+L+ C Q +L A +H LK+ N + + + L +Y C + LARR+FD +
Sbjct: 11 YLHLLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIP 70
Query: 294 EKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKE 353
SV LW +I YA G A++L+ +L VRPN+ T L AC+ L ++ G E
Sbjct: 71 NPSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVE 130
Query: 354 IEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGM 413
I + + GLES+ V T+L+ ++KCG + +A+ +F + +D+ W+AMI G +++G+
Sbjct: 131 IHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGL 190
Query: 414 GDQALNLFYKMQHVEGLKPDAVVYTSIL 441
D A+ L +MQ EG+ P++ +L
Sbjct: 191 CDDAVQLIMQMQE-EGICPNSSTIVGVL 217
>gi|168056582|ref|XP_001780298.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668246|gb|EDQ54857.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 986
Score = 424 bits (1089), Expect = e-116, Method: Compositional matrix adjust.
Identities = 212/625 (33%), Positives = 371/625 (59%), Gaps = 9/625 (1%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI +G F++ + + M + GV + F +L+AC + ++ GK+VH+ + +VG
Sbjct: 283 MITGLARHGRFKQACNLFQRMEEEGVQPDKVAFVSLLRACNHPEALEQGKKVHARMKEVG 342
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+ + +V T ++ MY+KC + +V D V+ R+VVSW ++I+ ++ DEA L
Sbjct: 343 WDTEIYVGTAILSMYTKCGSMEDALEVFD--LVKGRNVVSWTAMIAGFAQHGRIDEAFLF 400
Query: 121 LKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
+M G+E + TF+S++ CS ++G + + + G +++ + +++SMYA
Sbjct: 401 FNKMIESGIEPNRVTFMSILGACSSPSALKRGQQIQDHIIEAGYGSDD-RVRTALLSMYA 459
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K G + +A +F++I + ++V+W +I YV + A + + + P+ F +
Sbjct: 460 KCGSLKDAHRVFEKISKQNVVAWNAMITAYVQHEQYDNALATFQALLKEGIKPNSSTFTS 519
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
++ C +L L +H L++K+G ++ + N LVSM+ CGDL A+ +F+ + ++
Sbjct: 520 ILNVCKSSDSLELGKWVHFLIMKAGLESDLHVSNALVSMFVNCGDLMSAKNLFNDMPKRD 579
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEE 356
+ W ++I G+ Q G A + FK + ++ ++P++ T L+ACA +L++G+ +
Sbjct: 580 LVSWNTIIAGFVQHGKNQVAFDYFKMMQESGIKPDKITFTGLLNACASPEALTEGRRLHA 639
Query: 357 YIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQ 416
I + + V T LI M++KCG I A +VF ++P K++ W++MI GYA HG G +
Sbjct: 640 LITEAAFDCDVLVGTGLISMYTKCGSIEDAHQVFHKLPKKNVYSWTSMITGYAQHGRGKE 699
Query: 417 ALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCL 476
AL LFY+MQ EG+KPD + + LSAC+H+G++++GL F+SM+ F IEP +EHY C+
Sbjct: 700 ALELFYQMQQ-EGVKPDWITFVGALSACAHAGLIEEGLHHFQSMKE-FNIEPRMEHYGCM 757
Query: 477 VDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGST 536
VDL GRAG + A++ I +M VE ++VW LL AC H NVEL E AA+ L L+P
Sbjct: 758 VDLFGRAGLLNEAVEFIIKMQVEPDSRVWGALLGACQVHLNVELAEKAAQKKLELDPNDN 817
Query: 537 GNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSV 596
G +++++N++ +AGMWKE A R +M DR + K+PG S +E+DG V F + D++H +
Sbjct: 818 GVFVILSNIYAAAGMWKEVAKMRKVMLDRGVVKKPGQSWIEVDGKVHTFYSDDKTHPQTE 877
Query: 597 DIRKTLKELHIKLLEAGYIAEADIV 621
+I L+ LH+++ + GY+ + V
Sbjct: 878 EIHAELERLHMEMRQLGYVPDTRYV 902
Score = 278 bits (712), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 150/513 (29%), Positives = 272/513 (53%), Gaps = 10/513 (1%)
Query: 7 NNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAF 66
+G +EE + M+Q V + TF +L ACA+ ++ G+ +++ +LK G+ D F
Sbjct: 188 QHGLYEEAFKLHEQMVQDSVKPDKRTFVSMLNACADARNVDKGRELYNLILKAGWDTDLF 247
Query: 67 VQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWV 126
V T LI+M+ KC D + KV D +P R +V+W S+I+ +R +A + + M
Sbjct: 248 VGTALINMHIKCGDIGDATKVFDNLPTR--DLVTWTSMITGLARHGRFKQACNLFQRMEE 305
Query: 127 LGLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVN 182
G++ FVS++ C + QG +H + ++G + EI + +++SMY K G +
Sbjct: 306 EGVQPDKVAFVSLLRACNHPEALEQGKKVHARMKEVGW-DTEIYVGTAILSMYTKCGSME 364
Query: 183 EARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCA 242
+A +FD + ++VSWT +I G+ G ++EAF N+M + P+ V F++++ C+
Sbjct: 365 DALEVFDLVKGRNVVSWTAMIAGFAQHGRIDEAFLFFNKMIESGIEPNRVTFMSILGACS 424
Query: 243 QVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTS 302
L + ++++GY ++D + L+SMY KCG L+ A RVF+ + +++V W +
Sbjct: 425 SPSALKRGQQIQDHIIEAGYGSDDRVRTALLSMYAKCGSLKDAHRVFEKISKQNVVAWNA 484
Query: 303 MIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNG 362
MI Y Q A+ F+ LLK ++PN +T + L+ C SL GK + I+ G
Sbjct: 485 MITAYVQHEQYDNALATFQALLKEGIKPNSSTFTSILNVCKSSDSLELGKWVHFLIMKAG 544
Query: 363 LESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFY 422
LES+ V +L+ MF CG + AK +F +P +DL W+ +I G+ HG A + ++
Sbjct: 545 LESDLHVSNALVSMFVNCGDLMSAKNLFNDMPKRDLVSWNTIIAGFVQHGKNQVAFD-YF 603
Query: 423 KMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGR 482
KM G+KPD + +T +L+AC+ + +G ++ + + + L+ + +
Sbjct: 604 KMMQESGIKPDKITFTGLLNACASPEALTEGRR-LHALITEAAFDCDVLVGTGLISMYTK 662
Query: 483 AGRFDLALKTIHEMPVEVQAQVWAPLLSACMKH 515
G + A + H++P + W +++ +H
Sbjct: 663 CGSIEDAHQVFHKLP-KKNVYSWTSMITGYAQH 694
Score = 266 bits (679), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 148/511 (28%), Positives = 277/511 (54%), Gaps = 10/511 (1%)
Query: 9 GSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQ 68
G F E + + + + T+ +L+ C ++ DG+R+++H+ K G Q D F+
Sbjct: 89 GQFNEAMQVLERVDSSHIQIYRQTYSALLQLCIKFKNLGDGERIYNHIKKSGVQPDIFMW 148
Query: 69 TGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLG 128
LI+MY+KC + +S++++ D+M R + V SWN ++ + + L +EA + ++M
Sbjct: 149 NTLINMYAKCGNTISAKQIFDDM--REKDVYSWNLLLGGYVQHGLYEEAFKLHEQMVQDS 206
Query: 129 LELSASTFVSVVSGCSFRQGISMHCCVYKLGL---LNNEIPLANSVMSMYAKFGKVNEAR 185
++ TFVS+++ C+ + + +Y L L + ++ + ++++M+ K G + +A
Sbjct: 207 VKPDKRTFVSMLNACADARNVDKGRELYNLILKAGWDTDLFVGTALINMHIKCGDIGDAT 266
Query: 186 SIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVG 245
+FD + +V+WT++I G G +A L +M V PD V F++L+ C
Sbjct: 267 KVFDNLPTRDLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQPDKVAFVSLLRACNHPE 326
Query: 246 NLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIG 305
L +H+ + + G++ E + ++SMYTKCG +E A VFD V ++V WT+MI
Sbjct: 327 ALEQGKKVHARMKEVGWDTEIYVGTAILSMYTKCGSMEDALEVFDLVKGRNVVSWTAMIA 386
Query: 306 GYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLES 365
G+AQ G EA F +++++ + PN T + L AC+ +L +G++I+++I+ G S
Sbjct: 387 GFAQHGRIDEAFLFFNKMIESGIEPNRVTFMSILGACSSPSALKRGQQIQDHIIEAGYGS 446
Query: 366 NRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQ 425
+ +V+T+L+ M++KCG + A VFE++ +++ W+AMI Y H D AL F +
Sbjct: 447 DDRVRTALLSMYAKCGSLKDAHRVFEKISKQNVVAWNAMITAYVQHEQYDNALATFQALL 506
Query: 426 HVEGLKPDAVVYTSILSACSHSGMVDDG-LSFFKSMQSNFGIEPSIEHYLCLVDLLGRAG 484
EG+KP++ +TSIL+ C S ++ G F M++ G+E + LV + G
Sbjct: 507 K-EGIKPNSSTFTSILNVCKSSDSLELGKWVHFLIMKA--GLESDLHVSNALVSMFVNCG 563
Query: 485 RFDLALKTIHEMPVEVQAQVWAPLLSACMKH 515
A ++MP + W +++ ++H
Sbjct: 564 DLMSAKNLFNDMP-KRDLVSWNTIIAGFVQH 593
Score = 209 bits (532), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 125/426 (29%), Positives = 234/426 (54%), Gaps = 16/426 (3%)
Query: 102 NSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGC----SFRQGISMHCCVYK 157
N++++ S+A +EA+ VL+ + +++ T+ +++ C + G ++ + K
Sbjct: 79 NAVLNRLSKAGQFNEAMQVLERVDSSHIQIYRQTYSALLQLCIKFKNLGDGERIYNHIKK 138
Query: 158 LGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFG 217
G+ +I + N++++MYAK G A+ IFD++ E + SW ++GGYV G EAF
Sbjct: 139 SGV-QPDIFMWNTLINMYAKCGNTISAKQIFDDMREKDVYSWNLLLGGYVQHGLYEEAFK 197
Query: 218 LCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYT 277
L QM + SV PD F++++ CA N+ +++L+LK+G++ + + L++M+
Sbjct: 198 LHEQMVQDSVKPDKRTFVSMLNACADARNVDKGRELYNLILKAGWDTDLFVGTALINMHI 257
Query: 278 KCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLAT 337
KCGD+ A +VFD + + + WTSMI G A+ G +A NLF+R+ + V+P++ +
Sbjct: 258 KCGDIGDATKVFDNLPTRDLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQPDKVAFVS 317
Query: 338 TLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKD 397
L AC +L +GK++ + G ++ V T+++ M++KCG + A EVF+ V ++
Sbjct: 318 LLRACNHPEALEQGKKVHARMKEVGWDTEIYVGTAILSMYTKCGSMEDALEVFDLVKGRN 377
Query: 398 LAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFF 457
+ W+AMI G+A HG D+A F KM G++P+ V + SIL ACS + G
Sbjct: 378 VVSWTAMIAGFAQHGRIDEAFLFFNKMIE-SGIEPNRVTFMSILGACSSPSALKRGQQIQ 436
Query: 458 KS-MQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQ---VWAPLLSACM 513
+++ +G + + L+ + + G +LK H + ++ Q W +++A +
Sbjct: 437 DHIIEAGYGSDDRVR--TALLSMYAKCG----SLKDAHRVFEKISKQNVVAWNAMITAYV 490
Query: 514 KHHNVE 519
+H +
Sbjct: 491 QHEQYD 496
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 96/356 (26%), Positives = 183/356 (51%), Gaps = 42/356 (11%)
Query: 168 ANSVMSMYAKFGKVNEARSIFDEIGETSI----VSWTTIIGGYVNVGNVNEAFGLCNQMR 223
AN+V++ +K G+ NEA + + + + I +++ ++ + N+ + + N ++
Sbjct: 78 ANAVLNRLSKAGQFNEAMQVLERVDSSHIQIYRQTYSALLQLCIKFKNLGDGERIYNHIK 137
Query: 224 RMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLE 283
+ V PD+ ++ N L++MY KCG+
Sbjct: 138 KSGVQPDIFMW-----------------------------------NTLINMYAKCGNTI 162
Query: 284 LARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACA 343
A+++FD + EK V+ W ++GGY Q G EA L +++++ SV+P++ T + L+ACA
Sbjct: 163 SAKQIFDDMREKDVYSWNLLLGGYVQHGLYEEAFKLHEQMVQDSVKPDKRTFVSMLNACA 222
Query: 344 ELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSA 403
+ ++ KG+E+ I+ G +++ V T+LI+M KCG I A +VF+ +P +DL W++
Sbjct: 223 DARNVDKGRELYNLILKAGWDTDLFVGTALINMHIKCGDIGDATKVFDNLPTRDLVTWTS 282
Query: 404 MINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSN 463
MI G A HG QA NLF +M+ EG++PD V + S+L AC+H ++ G M+
Sbjct: 283 MITGLARHGRFKQACNLFQRMEE-EGVQPDKVAFVSLLRACNHPEALEQGKKVHARMKE- 340
Query: 464 FGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVE 519
G + I ++ + + G + AL+ + ++ W +++ +H ++
Sbjct: 341 VGWDTEIYVGTAILSMYTKCGSMEDALE-VFDLVKGRNVVSWTAMIAGFAQHGRID 395
>gi|224080660|ref|XP_002306200.1| predicted protein [Populus trichocarpa]
gi|222849164|gb|EEE86711.1| predicted protein [Populus trichocarpa]
Length = 784
Score = 424 bits (1089), Expect = e-115, Method: Compositional matrix adjust.
Identities = 228/619 (36%), Positives = 356/619 (57%), Gaps = 23/619 (3%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+IR TNNG F+E + Y M G+ ++FTFP V+KAC + ++ G++VH ++K+G
Sbjct: 95 IIRGYTNNGLFQEAIDFYYRMECEGIRSDNFTFPFVIKACGELLALMVGQKVHGKLIKIG 154
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F D +V LIDMY K + KV DEMPVR +VSWNS++S + +++
Sbjct: 155 FDLDVYVCNFLIDMYLKIGFIELAEKVFDEMPVR--DLVSWNSMVSGYQIDGDGLSSLMC 212
Query: 121 LKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
KEM LG + +S + CS R G+ +HC V + L +I + S++ MY
Sbjct: 213 FKEMLRLGNKADRFGMISALGACSIEHCLRSGMEIHCQVIR-SELELDIMVQTSLIDMYG 271
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K GKV+ A +F+ I +IV+W +IGG V PD++ +N
Sbjct: 272 KCGKVDYAERVFNRIYSKNIVAWNAMIGG---------------MQEDDKVIPDVITMIN 316
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
L+ C+Q G L S+H ++ + L+ LV MY KCG+L+LA VF+ + EK+
Sbjct: 317 LLPSCSQSGALLEGKSIHGFAIRKMFLPYLVLETALVDMYGKCGELKLAEHVFNQMNEKN 376
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEE 356
+ W +M+ Y Q EA+ +F+ +L ++P+ T+A+ L A AEL S S+GK+I
Sbjct: 377 MVSWNTMVAAYVQNEQYKEALKMFQHILNEPLKPDAITIASVLPAVAELASRSEGKQIHS 436
Query: 357 YIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQ 416
YI+ GL SN + ++++M++KCG + A+E F+ + KD+ W+ MI YAIHG G
Sbjct: 437 YIMKLGLGSNTFISNAIVYMYAKCGDLQTAREFFDGMVCKDVVSWNTMIMAYAIHGFGRT 496
Query: 417 ALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCL 476
++ F +M+ +G KP+ + S+L+ACS SG++D+G FF SM+ +GI+P IEHY C+
Sbjct: 497 SIQFFSEMRG-KGFKPNGSTFVSLLTACSISGLIDEGWGFFNSMKVEYGIDPGIEHYGCM 555
Query: 477 VDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGST 536
+DLLGR G D A I EMP+ A++W LL+A H++V L E AA+++L+L +T
Sbjct: 556 LDLLGRNGNLDEAKCFIEEMPLVPTARIWGSLLAASRNHNDVVLAELAARHILSLKHDNT 615
Query: 537 GNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSV 596
G Y+L++N++ AG W++ + LM ++ L K G S V+I+G + F+ DRSH +
Sbjct: 616 GCYVLLSNMYAEAGRWEDVDRIKYLMKEQGLVKTVGCSMVDINGRSESFINQDRSHAHTN 675
Query: 597 DIRKTLKELHIKLLEAGYI 615
I L L K+ E Y+
Sbjct: 676 LIYDVLDILLKKIGEDIYL 694
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 98/341 (28%), Positives = 162/341 (47%), Gaps = 26/341 (7%)
Query: 175 YAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVF 234
+ + G + A +F+++ + W II GY N G EA +M + D F
Sbjct: 68 FVESGLMGNALDMFEKMNHSDTFIWNVIIRGYTNNGLFQEAIDFYYRMECEGIRSDNFTF 127
Query: 235 LNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLE 294
+I C ++ L + +H L+K G++ + + N L+ MY K G +ELA +VFD +
Sbjct: 128 PFVIKACGELLALMVGQKVHGKLIKIGFDLDVYVCNFLIDMYLKIGFIELAEKVFDEMPV 187
Query: 295 KSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEI 354
+ + W SM+ GY G ++ FK +L+ + + + + L AC+ L G EI
Sbjct: 188 RDLVSWNSMVSGYQIDGDGLSSLMCFKEMLRLGNKADRFGMISALGACSIEHCLRSGMEI 247
Query: 355 EEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMG 414
++ + LE + VQTSLI M+ KCG+++ A+ VF R+ K++ W+AMI G
Sbjct: 248 HCQVIRSELELDIMVQTSLIDMYGKCGKVDYAERVFNRIYSKNIVAWNAMIGG------- 300
Query: 415 DQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYL 474
MQ + + PD + ++L +CS SG + +G S F I YL
Sbjct: 301 ---------MQEDDKVIPDVITMINLLPSCSQSGALLEGKSI-----HGFAIRKMFLPYL 346
Query: 475 ----CLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSA 511
LVD+ G+ G LA ++M E W +++A
Sbjct: 347 VLETALVDMYGKCGELKLAEHVFNQMN-EKNMVSWNTMVAA 386
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 93/349 (26%), Positives = 167/349 (47%), Gaps = 25/349 (7%)
Query: 101 WNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGC----SFRQGISMHCCVY 156
WN II ++ L EAI M G+ TF V+ C + G +H +
Sbjct: 92 WNVIIRGYTNNGLFQEAIDFYYRMECEGIRSDNFTFPFVIKACGELLALMVGQKVHGKLI 151
Query: 157 KLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAF 216
K+G + ++ + N ++ MY K G + A +FDE+ +VSW +++ GY G+ +
Sbjct: 152 KIG-FDLDVYVCNFLIDMYLKIGFIELAEKVFDEMPVRDLVSWNSMVSGYQIDGDGLSSL 210
Query: 217 GLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMY 276
+M R+ D ++ + C+ L + +H +++S + + L+ MY
Sbjct: 211 MCFKEMLRLGNKADRFGMISALGACSIEHCLRSGMEIHCQVIRSELELDIMVQTSLIDMY 270
Query: 277 TKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLA 336
KCG ++ A RVF+ + K++ W +MIGG + V P+ T+
Sbjct: 271 GKCGKVDYAERVFNRIYSKNIVAWNAMIGGMQE---------------DDKVIPDVITMI 315
Query: 337 TTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDK 396
L +C++ G+L +GK I + + ++T+L+ M+ KCG + A+ VF ++ +K
Sbjct: 316 NLLPSCSQSGALLEGKSIHGFAIRKMFLPYLVLETALVDMYGKCGELKLAEHVFNQMNEK 375
Query: 397 DLAVWSAMINGYAIHGMGDQALNLFYKMQHV--EGLKPDAVVYTSILSA 443
++ W+ M+ Y + +AL +F QH+ E LKPDA+ S+L A
Sbjct: 376 NMVSWNTMVAAYVQNEQYKEALKMF---QHILNEPLKPDAITIASVLPA 421
>gi|54695180|dbj|BAD67155.1| PpPPR_98 [Physcomitrella patens]
Length = 986
Score = 423 bits (1088), Expect = e-115, Method: Compositional matrix adjust.
Identities = 212/625 (33%), Positives = 371/625 (59%), Gaps = 9/625 (1%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI +G F++ + + M + GV + F +L+AC + ++ GK+VH+ + +VG
Sbjct: 283 MITGLARHGRFKQACNLFQRMEEEGVQPDKVAFVSLLRACNHPEALEQGKKVHARMKEVG 342
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+ + +V T ++ MY+KC + +V D V+ R+VVSW ++I+ ++ DEA L
Sbjct: 343 WDTEIYVGTAILSMYTKCGSMEDALEVFD--LVKGRNVVSWTAMIAGFAQHGRIDEAFLF 400
Query: 121 LKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
+M G+E + TF+S++ CS ++G + + + G +++ + +++SMYA
Sbjct: 401 FNKMIESGIEPNRVTFMSILGACSSPSALKRGQQIQDHIIEAGYGSDD-RVRTALLSMYA 459
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K G + +A +F++I + ++V+W +I YV + A + + + P+ F +
Sbjct: 460 KCGSLKDAHRVFEKISKQNVVAWNAMITAYVQHEQYDNALATFQALLKEGIKPNSSTFTS 519
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
++ C +L L +H L++K+G ++ + N LVSM+ CGDL A+ +F+ + ++
Sbjct: 520 ILNVCKSSDSLELGKWVHFLIMKAGLESDLHVSNALVSMFVNCGDLMSAKNLFNDMPKRD 579
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEE 356
+ W ++I G+ Q G A + FK + ++ ++P++ T L+ACA +L++G+ +
Sbjct: 580 LVSWNTIIAGFVQHGKNQVAFDYFKMMQESGIKPDKITFTGLLNACASPEALTEGRRLHA 639
Query: 357 YIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQ 416
I + + V T LI M++KCG I A +VF ++P K++ W++MI GYA HG G +
Sbjct: 640 LITEAAFDCDVLVGTGLISMYTKCGSIEDAHQVFHKLPKKNVYSWTSMIAGYAQHGRGKE 699
Query: 417 ALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCL 476
AL LFY+MQ EG+KPD + + LSAC+H+G++++GL F+SM+ F IEP +EHY C+
Sbjct: 700 ALELFYQMQQ-EGVKPDWITFVGALSACAHAGLIEEGLHHFQSMKE-FNIEPRMEHYGCM 757
Query: 477 VDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGST 536
VDL GRAG + A++ I +M VE ++VW LL AC H NVEL E AA+ L L+P
Sbjct: 758 VDLFGRAGLLNEAVEFIIKMQVEPDSRVWGALLGACQVHLNVELAEKAAQKKLELDPNDN 817
Query: 537 GNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSV 596
G +++++N++ +AGMWKE A R +M DR + K+PG S +E+DG V F + D++H +
Sbjct: 818 GVFVILSNIYAAAGMWKEVAKMRKVMLDRGVVKKPGQSWIEVDGKVHTFYSDDKTHPQTE 877
Query: 597 DIRKTLKELHIKLLEAGYIAEADIV 621
+I L+ LH+++ + GY+ + V
Sbjct: 878 EIHAELERLHMEMRQLGYVPDTRYV 902
Score = 278 bits (712), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 150/513 (29%), Positives = 272/513 (53%), Gaps = 10/513 (1%)
Query: 7 NNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAF 66
+G +EE + M+Q V + TF +L ACA+ ++ G+ +++ +LK G+ D F
Sbjct: 188 QHGLYEEAFKLHEQMVQDSVKPDKRTFVSMLNACADARNVDKGRELYNLILKAGWDTDLF 247
Query: 67 VQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWV 126
V T LI+M+ KC D + KV D +P R +V+W S+I+ +R +A + + M
Sbjct: 248 VGTALINMHIKCGDIGDATKVFDNLPTR--DLVTWTSMITGLARHGRFKQACNLFQRMEE 305
Query: 127 LGLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVN 182
G++ FVS++ C + QG +H + ++G + EI + +++SMY K G +
Sbjct: 306 EGVQPDKVAFVSLLRACNHPEALEQGKKVHARMKEVGW-DTEIYVGTAILSMYTKCGSME 364
Query: 183 EARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCA 242
+A +FD + ++VSWT +I G+ G ++EAF N+M + P+ V F++++ C+
Sbjct: 365 DALEVFDLVKGRNVVSWTAMIAGFAQHGRIDEAFLFFNKMIESGIEPNRVTFMSILGACS 424
Query: 243 QVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTS 302
L + ++++GY ++D + L+SMY KCG L+ A RVF+ + +++V W +
Sbjct: 425 SPSALKRGQQIQDHIIEAGYGSDDRVRTALLSMYAKCGSLKDAHRVFEKISKQNVVAWNA 484
Query: 303 MIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNG 362
MI Y Q A+ F+ LLK ++PN +T + L+ C SL GK + I+ G
Sbjct: 485 MITAYVQHEQYDNALATFQALLKEGIKPNSSTFTSILNVCKSSDSLELGKWVHFLIMKAG 544
Query: 363 LESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFY 422
LES+ V +L+ MF CG + AK +F +P +DL W+ +I G+ HG A + ++
Sbjct: 545 LESDLHVSNALVSMFVNCGDLMSAKNLFNDMPKRDLVSWNTIIAGFVQHGKNQVAFD-YF 603
Query: 423 KMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGR 482
KM G+KPD + +T +L+AC+ + +G ++ + + + L+ + +
Sbjct: 604 KMMQESGIKPDKITFTGLLNACASPEALTEGRR-LHALITEAAFDCDVLVGTGLISMYTK 662
Query: 483 AGRFDLALKTIHEMPVEVQAQVWAPLLSACMKH 515
G + A + H++P + W +++ +H
Sbjct: 663 CGSIEDAHQVFHKLP-KKNVYSWTSMIAGYAQH 694
Score = 267 bits (682), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 148/511 (28%), Positives = 278/511 (54%), Gaps = 10/511 (1%)
Query: 9 GSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQ 68
G F E + + + + T+ +L+ C ++ DG+R+++H+ K G Q D F++
Sbjct: 89 GQFNEAMQVLERVDSSHIQIYRQTYSALLQLCIKFKNLGDGERIYNHIKKSGVQPDIFMR 148
Query: 69 TGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLG 128
LI+MY+KC + +S++++ D+M R + V SWN ++ + + L +EA + ++M
Sbjct: 149 NTLINMYAKCGNTISAKQIFDDM--REKDVYSWNLLLGGYVQHGLYEEAFKLHEQMVQDS 206
Query: 129 LELSASTFVSVVSGCSFRQGISMHCCVYKLGL---LNNEIPLANSVMSMYAKFGKVNEAR 185
++ TFVS+++ C+ + + +Y L L + ++ + ++++M+ K G + +A
Sbjct: 207 VKPDKRTFVSMLNACADARNVDKGRELYNLILKAGWDTDLFVGTALINMHIKCGDIGDAT 266
Query: 186 SIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVG 245
+FD + +V+WT++I G G +A L +M V PD V F++L+ C
Sbjct: 267 KVFDNLPTRDLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQPDKVAFVSLLRACNHPE 326
Query: 246 NLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIG 305
L +H+ + + G++ E + ++SMYTKCG +E A VFD V ++V WT+MI
Sbjct: 327 ALEQGKKVHARMKEVGWDTEIYVGTAILSMYTKCGSMEDALEVFDLVKGRNVVSWTAMIA 386
Query: 306 GYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLES 365
G+AQ G EA F +++++ + PN T + L AC+ +L +G++I+++I+ G S
Sbjct: 387 GFAQHGRIDEAFLFFNKMIESGIEPNRVTFMSILGACSSPSALKRGQQIQDHIIEAGYGS 446
Query: 366 NRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQ 425
+ +V+T+L+ M++KCG + A VFE++ +++ W+AMI Y H D AL F +
Sbjct: 447 DDRVRTALLSMYAKCGSLKDAHRVFEKISKQNVVAWNAMITAYVQHEQYDNALATFQALL 506
Query: 426 HVEGLKPDAVVYTSILSACSHSGMVDDG-LSFFKSMQSNFGIEPSIEHYLCLVDLLGRAG 484
EG+KP++ +TSIL+ C S ++ G F M++ G+E + LV + G
Sbjct: 507 K-EGIKPNSSTFTSILNVCKSSDSLELGKWVHFLIMKA--GLESDLHVSNALVSMFVNCG 563
Query: 485 RFDLALKTIHEMPVEVQAQVWAPLLSACMKH 515
A ++MP + W +++ ++H
Sbjct: 564 DLMSAKNLFNDMP-KRDLVSWNTIIAGFVQH 593
Score = 210 bits (534), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 125/426 (29%), Positives = 234/426 (54%), Gaps = 16/426 (3%)
Query: 102 NSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGC----SFRQGISMHCCVYK 157
N++++ S+A +EA+ VL+ + +++ T+ +++ C + G ++ + K
Sbjct: 79 NAVLNRLSKAGQFNEAMQVLERVDSSHIQIYRQTYSALLQLCIKFKNLGDGERIYNHIKK 138
Query: 158 LGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFG 217
G+ +I + N++++MYAK G A+ IFD++ E + SW ++GGYV G EAF
Sbjct: 139 SGV-QPDIFMRNTLINMYAKCGNTISAKQIFDDMREKDVYSWNLLLGGYVQHGLYEEAFK 197
Query: 218 LCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYT 277
L QM + SV PD F++++ CA N+ +++L+LK+G++ + + L++M+
Sbjct: 198 LHEQMVQDSVKPDKRTFVSMLNACADARNVDKGRELYNLILKAGWDTDLFVGTALINMHI 257
Query: 278 KCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLAT 337
KCGD+ A +VFD + + + WTSMI G A+ G +A NLF+R+ + V+P++ +
Sbjct: 258 KCGDIGDATKVFDNLPTRDLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQPDKVAFVS 317
Query: 338 TLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKD 397
L AC +L +GK++ + G ++ V T+++ M++KCG + A EVF+ V ++
Sbjct: 318 LLRACNHPEALEQGKKVHARMKEVGWDTEIYVGTAILSMYTKCGSMEDALEVFDLVKGRN 377
Query: 398 LAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFF 457
+ W+AMI G+A HG D+A F KM G++P+ V + SIL ACS + G
Sbjct: 378 VVSWTAMIAGFAQHGRIDEAFLFFNKMIE-SGIEPNRVTFMSILGACSSPSALKRGQQIQ 436
Query: 458 KS-MQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQ---VWAPLLSACM 513
+++ +G + + L+ + + G +LK H + ++ Q W +++A +
Sbjct: 437 DHIIEAGYGSDDRVR--TALLSMYAKCG----SLKDAHRVFEKISKQNVVAWNAMITAYV 490
Query: 514 KHHNVE 519
+H +
Sbjct: 491 QHEQYD 496
Score = 168 bits (425), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 100/352 (28%), Positives = 183/352 (51%), Gaps = 34/352 (9%)
Query: 168 ANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSV 227
AN+V++ +K G+ NEA + + + + I Q+ R +
Sbjct: 78 ANAVLNRLSKAGQFNEAMQVLERVDSSHI------------------------QIYRQTY 113
Query: 228 TPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARR 287
+ L+ C + NL +++ + KSG + + N L++MY KCG+ A++
Sbjct: 114 SA-------LLQLCIKFKNLGDGERIYNHIKKSGVQPDIFMRNTLINMYAKCGNTISAKQ 166
Query: 288 VFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGS 347
+FD + EK V+ W ++GGY Q G EA L +++++ SV+P++ T + L+ACA+ +
Sbjct: 167 IFDDMREKDVYSWNLLLGGYVQHGLYEEAFKLHEQMVQDSVKPDKRTFVSMLNACADARN 226
Query: 348 LSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMING 407
+ KG+E+ I+ G +++ V T+LI+M KCG I A +VF+ +P +DL W++MI G
Sbjct: 227 VDKGRELYNLILKAGWDTDLFVGTALINMHIKCGDIGDATKVFDNLPTRDLVTWTSMITG 286
Query: 408 YAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIE 467
A HG QA NLF +M+ EG++PD V + S+L AC+H ++ G M+ G +
Sbjct: 287 LARHGRFKQACNLFQRMEE-EGVQPDKVAFVSLLRACNHPEALEQGKKVHARMKE-VGWD 344
Query: 468 PSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVE 519
I ++ + + G + AL+ + ++ W +++ +H ++
Sbjct: 345 TEIYVGTAILSMYTKCGSMEDALE-VFDLVKGRNVVSWTAMIAGFAQHGRID 395
>gi|147865382|emb|CAN79811.1| hypothetical protein VITISV_018821 [Vitis vinifera]
Length = 871
Score = 422 bits (1086), Expect = e-115, Method: Compositional matrix adjust.
Identities = 242/670 (36%), Positives = 367/670 (54%), Gaps = 55/670 (8%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+IR S + G E+ L Y M + G + +TFP VLKAC I S G VH+ V G
Sbjct: 116 LIRRSVHLGFLEDVLQLYRRMQRLGWRPDHYTFPFVLKACGEIPSFRCGASVHAVVFASG 175
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVR-LRSVVSWNSIISAHSRACLNDEAIL 119
F+ + FV GL+ MY +C + ++R+V DEM R + +VSWNSI++A+ + + A+
Sbjct: 176 FEWNVFVGNGLVSMYGRCGAWENARQVFDEMRERGVGDLVSWNSIVAAYMQGGDSIRAMK 235
Query: 120 VLKEMWV-LGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSM 174
+ + M LG+ A + V+V+ C+ + +G +H + GL ++ + N+V+ M
Sbjct: 236 MFERMTEDLGIRPDAVSLVNVLPACASVGAWSRGKQVHGYALRSGLFE-DVFVGNAVVDM 294
Query: 175 YAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVT------ 228
YAK G + EA +F+ + +VSW ++ GY +G ++A GL ++R +
Sbjct: 295 YAKCGMMEEANKVFERMKVKDVVSWNAMVTGYSQIGRFDDALGLFEKIREEKIELNVVTW 354
Query: 229 -----------------------------PDLVVFLNLILGCAQVGNLFLALSMHSLLLK 259
P++V ++L+ GCA G L H +K
Sbjct: 355 SAVIAGYAQRGLGFEALDVFRQMLLCGSEPNVVTLVSLLSGCASAGTLLHGKETHCHAIK 414
Query: 260 SGYN--NEDPLDNL-----LVSMYTKCGDLELARRVFDAVLEK--SVFLWTSMIGGYAQL 310
N DP D+L L+ MY+KC + AR +FD + K SV WT +IGG AQ
Sbjct: 415 WILNLDENDPGDDLMVINALIDMYSKCKSPKAARAMFDLIPPKDRSVVTWTVLIGGNAQH 474
Query: 311 GYPSEAVNLFKRLLKTS--VRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQ 368
G +EA+ LF ++L+ V PN T++ L ACA LG+L G++I Y++ N ES
Sbjct: 475 GEANEALELFSQMLQPDNFVMPNAFTISCALMACARLGALRFGRQIHAYVLRNRFESAML 534
Query: 369 -VQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHV 427
V LI M+SK G ++ A+ VF+ + ++ W++++ GY +HG G++AL +FY+MQ V
Sbjct: 535 FVANCLIDMYSKSGDVDAARVVFDNMHQRNGVSWTSLMTGYGMHGRGEEALQIFYEMQKV 594
Query: 428 EGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFD 487
L PD V + +L ACSHSGMVD G+++F M +FG+ P EHY C+VDLL RAGR D
Sbjct: 595 X-LVPDGVTFVVVLYACSHSGMVDQGINYFNGMNKDFGVVPGAEHYACMVDLLSRAGRLD 653
Query: 488 LALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFT 547
A++ I MP++ VW LLSAC + NVELGEYAA LL L G+ G+Y L++N++
Sbjct: 654 EAMELIRGMPMKPTPAVWVALLSACRVYANVELGEYAANQLLELESGNDGSYTLLSNIYA 713
Query: 548 SAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKELHI 607
+A WK+ A R LM + + K PG S V+ F AGD SH +S I L++L
Sbjct: 714 NARCWKDVARIRYLMKNTGIKKRPGCSWVQGRKGTATFFAGDWSHPMSQQIYDLLRDLMQ 773
Query: 608 KLLEAGYIAE 617
++ GY+ +
Sbjct: 774 RIKALGYVPD 783
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 137/491 (27%), Positives = 220/491 (44%), Gaps = 57/491 (11%)
Query: 52 VHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRA 111
H +L G D T +I MY + + VL + +V WN +I
Sbjct: 67 THQQLLVQGLPHDP---THIISMYLTFNSPAKALSVLRRLHPSSHTVFWWNQLIRRSVHL 123
Query: 112 CLNDEAILVLKEMWVLGLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPL 167
++ + + + M LG TF V+ C SFR G S+H V+ G N + +
Sbjct: 124 GFLEDVLQLYRRMQRLGWRPDHYTFPFVLKACGEIPSFRCGASVHAVVFASGFEWN-VFV 182
Query: 168 ANSVMSMYAKFGKVNEARSIFDEIGETSI---VSWTTIIGGYVNVGNVNEAFGLCNQMRR 224
N ++SMY + G AR +FDE+ E + VSW +I+ Y+ G+ A + +M
Sbjct: 183 GNGLVSMYGRCGAWENARQVFDEMRERGVGDLVSWNSIVAAYMQGGDSIRAMKMFERMTE 242
Query: 225 -MSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLE 283
+ + PD V +N++ CA VG +H L+SG + + N +V MY KCG +E
Sbjct: 243 DLGIRPDAVSLVNVLPACASVGAWSRGKQVHGYALRSGLFEDVFVGNAVVDMYAKCGMME 302
Query: 284 LARRVFDAV-----------------------------------LEKSVFLWTSMIGGYA 308
A +VF+ + +E +V W+++I GYA
Sbjct: 303 EANKVFERMKVKDVVSWNAMVTGYSQIGRFDDALGLFEKIREEKIELNVVTWSAVIAGYA 362
Query: 309 QLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVL-------N 361
Q G EA+++F+++L PN TL + LS CA G+L GKE + + N
Sbjct: 363 QRGLGFEALDVFRQMLLCGSEPNVVTLVSLLSGCASAGTLLHGKETHCHAIKWILNLDEN 422
Query: 362 GLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAV--WSAMINGYAIHGMGDQALN 419
+ V +LI M+SKC A+ +F+ +P KD +V W+ +I G A HG ++AL
Sbjct: 423 DPGDDLMVINALIDMYSKCKSPKAARAMFDLIPPKDRSVVTWTVLIGGNAQHGEANEALE 482
Query: 420 LFYKMQHVEG-LKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVD 478
LF +M + + P+A + L AC+ G + G + N + CL+D
Sbjct: 483 LFSQMLQPDNFVMPNAFTISCALMACARLGALRFGRQIHAYVLRNRFESAMLFVANCLID 542
Query: 479 LLGRAGRFDLA 489
+ ++G D A
Sbjct: 543 MYSKSGDVDAA 553
>gi|297804280|ref|XP_002870024.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297315860|gb|EFH46283.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 871
Score = 422 bits (1086), Expect = e-115, Method: Compositional matrix adjust.
Identities = 222/613 (36%), Positives = 352/613 (57%), Gaps = 7/613 (1%)
Query: 6 TNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDA 65
+G F ++ + M+ +GV +S+TF V K+ +++ S+ G+++H ++LK GF +
Sbjct: 171 AKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVNGGEQLHGYILKSGFGERN 230
Query: 66 FVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMW 125
V L+ Y K S+RKV DEM R V+SWNSII+ + L ++ + V +M
Sbjct: 231 SVGNSLVAFYLKNHRVDSARKVFDEMTER--DVISWNSIINGYVSNGLAEKGLSVFVQML 288
Query: 126 VLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGL---LNNEIPLANSVMSMYAKFGKVN 182
G+E+ +T VSV +GC+ + IS+ V+ G+ + E N+++ MY+K G ++
Sbjct: 289 FSGIEIDLATIVSVFAGCADSRLISLGRAVHCFGVKACFSREDRFCNTLLDMYSKCGDLD 348
Query: 183 EARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCA 242
A+ +F E+ S+VS+T++I GY G EA L +M ++PD+ ++ CA
Sbjct: 349 SAKVVFREMSGRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCA 408
Query: 243 QVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTS 302
+ L +H + ++ + + N L+ MY KCG + A VF + K + W +
Sbjct: 409 RNRLLDEGKRVHEWIKENDMGFDIFVSNALMDMYAKCGSMREAELVFSEMRVKDIISWNT 468
Query: 303 MIGGYAQLGYPSEAVNLFKRLL-KTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLN 361
+IGGY++ Y +EA++LF LL + P+E T+A L ACA L + KG+EI YI+ N
Sbjct: 469 VIGGYSKNCYANEALSLFNLLLVEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRN 528
Query: 362 GLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLF 421
G S+R V SL+ M++KCG + A+ +F+ + KDL W+ MI GY +HG G +A+ LF
Sbjct: 529 GYFSDRHVANSLVDMYAKCGALLLARLLFDDITSKDLVSWTVMIAGYGMHGFGKEAIALF 588
Query: 422 YKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLG 481
+M+ G++PD + + S+L ACSHSG+VD+G FF M+ IEP++EHY C+VD+L
Sbjct: 589 NQMRQA-GIEPDEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLA 647
Query: 482 RAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYIL 541
R G A + I MP+ A +W LL C HH+V+L E A+ + L P +TG Y+L
Sbjct: 648 RTGNLSKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAERVAEKVFELEPENTGYYVL 707
Query: 542 MANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKT 601
MAN++ A W+E R + R L K PG S +EI G V +FVAGD S+ + I
Sbjct: 708 MANIYAEAEKWEEVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFVAGDSSNPETEKIEAF 767
Query: 602 LKELHIKLLEAGY 614
L+ + +++E GY
Sbjct: 768 LRGVRARMIEEGY 780
Score = 217 bits (552), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 133/426 (31%), Positives = 227/426 (53%), Gaps = 7/426 (1%)
Query: 32 TFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEM 91
T VL+ CA+ S+ DGK V + + GF D+ + + L MY+ C D + +V D+
Sbjct: 96 TLCSVLQLCADSKSLKDGKEVDNFIRGNGFVLDSNLGSKLALMYTNCGDLKEASRVFDQ- 154
Query: 92 PVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVV-SGCSFRQ--- 147
V++ + WN +++ +++ +I + K+M G+E+ + TF V S S R
Sbjct: 155 -VKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVNG 213
Query: 148 GISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYV 207
G +H + K G + NS+++ Y K +V+ AR +FDE+ E ++SW +II GYV
Sbjct: 214 GEQLHGYILKSGF-GERNSVGNSLVAFYLKNHRVDSARKVFDEMTERDVISWNSIINGYV 272
Query: 208 NVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDP 267
+ G + + QM + DL +++ GCA + L ++H +K+ ++ ED
Sbjct: 273 SNGLAEKGLSVFVQMLFSGIEIDLATIVSVFAGCADSRLISLGRAVHCFGVKACFSREDR 332
Query: 268 LDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTS 327
N L+ MY+KCGDL+ A+ VF + +SV +TSMI GYA+ G EAV LF+ + +
Sbjct: 333 FCNTLLDMYSKCGDLDSAKVVFREMSGRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEG 392
Query: 328 VRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAK 387
+ P+ T+ L+ CA L +GK + E+I N + + V +L+ M++KCG + +A+
Sbjct: 393 ISPDVYTVTAVLNCCARNRLLDEGKRVHEWIKENDMGFDIFVSNALMDMYAKCGSMREAE 452
Query: 388 EVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHS 447
VF + KD+ W+ +I GY+ + ++AL+LF + + PD +L AC+
Sbjct: 453 LVFSEMRVKDIISWNTVIGGYSKNCYANEALSLFNLLLVEKRFSPDERTVACVLPACASL 512
Query: 448 GMVDDG 453
D G
Sbjct: 513 SAFDKG 518
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 94/206 (45%), Gaps = 6/206 (2%)
Query: 292 VLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKG 351
++SV + + + + G AV L K + P TL + L CA+ SL G
Sbjct: 56 TFDRSVTDANTQLRRFCESGNLKNAVKLLHVSGKWDIDPR--TLCSVLQLCADSKSLKDG 113
Query: 352 KEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIH 411
KE++ +I NG + + + L M++ CG + +A VF++V + W+ ++N A
Sbjct: 114 KEVDNFIRGNGFVLDSNLGSKLALMYTNCGDLKEASRVFDQVKIEKALFWNILMNELAKS 173
Query: 412 GMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKS-MQSNFGIEPSI 470
G ++ LF KM G++ D+ ++ + + S V+ G ++S FG S+
Sbjct: 174 GDFSGSIGLFKKMMS-SGVEMDSYTFSCVSKSFSSLRSVNGGEQLHGYILKSGFGERNSV 232
Query: 471 EHYLCLVDLLGRAGRFDLALKTIHEM 496
+ LV + R D A K EM
Sbjct: 233 GN--SLVAFYLKNHRVDSARKVFDEM 256
>gi|356503240|ref|XP_003520419.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Glycine max]
Length = 801
Score = 422 bits (1085), Expect = e-115, Method: Compositional matrix adjust.
Identities = 222/626 (35%), Positives = 351/626 (56%), Gaps = 8/626 (1%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+I + N + Y+ M T ++F P VLKAC I S G+ VH V+K G
Sbjct: 95 LITSYIKNNCPADAAKIYAYMRGTDTEVDNFVIPSVLKACCLIPSFLLGQEVHGFVVKNG 154
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F D FV LI MYS+ +R + D+ + + VVSW+++I ++ R+ L DEA+ +
Sbjct: 155 FHGDVFVCNALIMMYSEVGSLALARLLFDK--IENKDVVSWSTMIRSYDRSGLLDEALDL 212
Query: 121 LKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNE-IPLANSVMSMY 175
L++M V+ ++ S +S+ + + G +MH V + G +PL +++ MY
Sbjct: 213 LRDMHVMRVKPSEIGMISITHVLAELADLKLGKAMHAYVMRNGKCGKSGVPLCTALIDMY 272
Query: 176 AKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFL 235
K + AR +FD + + SI+SWT +I Y++ N+NE L +M + P+ + L
Sbjct: 273 VKCENLAYARRVFDGLSKASIISWTAMIAAYIHCNNLNEGVRLFVKMLGEGMFPNEITML 332
Query: 236 NLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEK 295
+L+ C G L L +H+ L++G+ L + MY KCGD+ AR VFD+ K
Sbjct: 333 SLVKECGTAGALELGKLLHAFTLRNGFTLSLVLATAFIDMYGKCGDVRSARSVFDSFKSK 392
Query: 296 SVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIE 355
+ +W++MI YAQ EA ++F + +RPNE T+ + L CA+ GSL GK I
Sbjct: 393 DLMMWSAMISSYAQNNCIDEAFDIFVHMTGCGIRPNERTMVSLLMICAKAGSLEMGKWIH 452
Query: 356 EYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGD 415
YI G++ + ++TS + M++ CG I+ A +F D+D+++W+AMI+G+A+HG G+
Sbjct: 453 SYIDKQGIKGDMILKTSFVDMYANCGDIDTAHRLFAEATDRDISMWNAMISGFAMHGHGE 512
Query: 416 QALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLC 475
AL LF +M+ + G+ P+ + + L ACSHSG++ +G F M FG P +EHY C
Sbjct: 513 AALELFEEMEAL-GVTPNDITFIGALHACSHSGLLQEGKRLFHKMVHEFGFTPKVEHYGC 571
Query: 476 LVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGS 535
+VDLLGRAG D A + I MP+ V+ L+AC H N++LGE+AAK L+L P
Sbjct: 572 MVDLLGRAGLLDEAHELIKSMPMRPNIAVFGSFLAACKLHKNIKLGEWAAKQFLSLEPHK 631
Query: 536 TGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLS 595
+G +LM+N++ SA W + A R M D + KEPG S +E++G + F+ GDR H +
Sbjct: 632 SGYNVLMSNIYASANRWGDVAYIRRAMKDEGIVKEPGVSSIEVNGLLHEFIMGDREHPDA 691
Query: 596 VDIRKTLKELHIKLLEAGYIAEADIV 621
+ + + E+ KL +AGY + V
Sbjct: 692 KKVYEMIDEMREKLEDAGYTPDVSCV 717
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 64/290 (22%), Positives = 116/290 (40%), Gaps = 59/290 (20%)
Query: 252 SMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEK---------------- 295
++HS L+ S N P D + Y + D E+ V +VL+
Sbjct: 90 AIHSFLITSYIKNNCPADAAKIYAYMRGTDTEVDNFVIPSVLKACCLIPSFLLGQEVHGF 149
Query: 296 --------SVFLWTSMIGGYAQLGYPS-------------------------------EA 316
VF+ ++I Y+++G + EA
Sbjct: 150 VVKNGFHGDVFVCNALIMMYSEVGSLALARLLFDKIENKDVVSWSTMIRSYDRSGLLDEA 209
Query: 317 VNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGL--ESNRQVQTSLI 374
++L + + V+P+E + + AEL L GK + Y++ NG +S + T+LI
Sbjct: 210 LDLLRDMHVMRVKPSEIGMISITHVLAELADLKLGKAMHAYVMRNGKCGKSGVPLCTALI 269
Query: 375 HMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDA 434
M+ KC + A+ VF+ + + W+AMI Y ++ + LF KM EG+ P+
Sbjct: 270 DMYVKCENLAYARRVFDGLSKASIISWTAMIAAYIHCNNLNEGVRLFVKMLG-EGMFPNE 328
Query: 435 VVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAG 484
+ S++ C +G ++ G + G S+ +D+ G+ G
Sbjct: 329 ITMLSLVKECGTAGALELG-KLLHAFTLRNGFTLSLVLATAFIDMYGKCG 377
>gi|356528338|ref|XP_003532761.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Glycine max]
Length = 785
Score = 421 bits (1082), Expect = e-115, Method: Compositional matrix adjust.
Identities = 222/610 (36%), Positives = 357/610 (58%), Gaps = 9/610 (1%)
Query: 9 GSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQ 68
G++ E++ + M + G+ G+S+TF VLK A + + KRVH +VLK+GF V
Sbjct: 137 GNYRESVGLFEKMQELGIRGDSYTFTCVLKGFAASAKVRECKRVHGYVLKLGFGSYNAVV 196
Query: 69 TGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLG 128
LI Y KC + S+R + DE+ R VVSWNS+IS + + + +M LG
Sbjct: 197 NSLIAAYFKCGEVESARILFDELSDR--DVVSWNSMISGCTMNGFSRNGLEFFIQMLNLG 254
Query: 129 LELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEA 184
+++ ++T V+V+ C+ G ++H K G + + N+++ MY+K G +N A
Sbjct: 255 VDVDSATLVNVLVACANVGNLTLGRALHAYGVKAGF-SGGVMFNNTLLDMYSKCGNLNGA 313
Query: 185 RSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQV 244
+F ++GET+IVSWT+II +V G EA GL ++M+ + PD+ +++ CA
Sbjct: 314 NEVFVKMGETTIVSWTSIIAAHVREGLHYEAIGLFDEMQSKGLRPDIYAVTSVVHACACS 373
Query: 245 GNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMI 304
+L +H+ + K+ + P+ N L++MY KCG +E A +F + K++ W +MI
Sbjct: 374 NSLDKGREVHNHIKKNNMGSNLPVSNALMNMYAKCGSMEEANLIFSQLPVKNIVSWNTMI 433
Query: 305 GGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLE 364
GGY+Q P+EA+ LF + K ++P++ T+A L ACA L +L KG+EI +I+ G
Sbjct: 434 GGYSQNSLPNEALQLFLDMQK-QLKPDDVTMACVLPACAGLAALEKGREIHGHILRKGYF 492
Query: 365 SNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKM 424
S+ V +L+ M+ KCG + A+++F+ +P KD+ +W+ MI GY +HG G +A++ F KM
Sbjct: 493 SDLHVACALVDMYVKCGLLVLAQQLFDMIPKKDMILWTVMIAGYGMHGFGKEAISTFEKM 552
Query: 425 QHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAG 484
+ V G++P+ +TSIL AC+HSG++ +G F SM+S IEP +EHY C+VDLL R+G
Sbjct: 553 R-VAGIEPEESSFTSILYACTHSGLLKEGWKLFDSMKSECNIEPKLEHYACMVDLLIRSG 611
Query: 485 RFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMAN 544
A K I MP++ A +W LLS C HH+VEL E A+++ L P +T Y+L+AN
Sbjct: 612 NLSRAYKFIETMPIKPDAAIWGALLSGCRIHHDVELAEKVAEHIFELEPENTRYYVLLAN 671
Query: 545 LFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKE 604
++ A W+E + + L + G S +E+ G +F AGD SH + I L++
Sbjct: 672 VYAEAEKWEEVKKIQRRISKGGLKNDQGCSWIEVQGKFNIFFAGDTSHPQAKMIDSLLRK 731
Query: 605 LHIKLLEAGY 614
L +K+ GY
Sbjct: 732 LTMKMNRGGY 741
Score = 241 bits (615), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 145/470 (30%), Positives = 245/470 (52%), Gaps = 10/470 (2%)
Query: 32 TFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEM 91
T+ VL+ CA + S+ DGKRVHS + G D + L+ MY C D V R++ D
Sbjct: 59 TYCSVLQLCAELKSLEDGKRVHSIISSNGMAIDEVLGAKLVFMYVNCGDLVKGRRIFD-- 116
Query: 92 PVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSG----CSFRQ 147
+ + WN ++S +++ E++ + ++M LG+ + TF V+ G R+
Sbjct: 117 GILNDKIFLWNLLMSEYAKIGNYRESVGLFEKMQELGIRGDSYTFTCVLKGFAASAKVRE 176
Query: 148 GISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYV 207
+H V KLG + + NS+++ Y K G+V AR +FDE+ + +VSW ++I G
Sbjct: 177 CKRVHGYVLKLGF-GSYNAVVNSLIAAYFKCGEVESARILFDELSDRDVVSWNSMISGCT 235
Query: 208 NVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDP 267
G QM + V D +N+++ CA VGNL L ++H+ +K+G++
Sbjct: 236 MNGFSRNGLEFFIQMLNLGVDVDSATLVNVLVACANVGNLTLGRALHAYGVKAGFSGGVM 295
Query: 268 LDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTS 327
+N L+ MY+KCG+L A VF + E ++ WTS+I + + G EA+ LF +
Sbjct: 296 FNNTLLDMYSKCGNLNGANEVFVKMGETTIVSWTSIIAAHVREGLHYEAIGLFDEMQSKG 355
Query: 328 VRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAK 387
+RP+ + + + ACA SL KG+E+ +I N + SN V +L++M++KCG + +A
Sbjct: 356 LRPDIYAVTSVVHACACSNSLDKGREVHNHIKKNNMGSNLPVSNALMNMYAKCGSMEEAN 415
Query: 388 EVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHS 447
+F ++P K++ W+ MI GY+ + + ++AL LF MQ + LKPD V +L AC+
Sbjct: 416 LIFSQLPVKNIVSWNTMIGGYSQNSLPNEALQLFLDMQ--KQLKPDDVTMACVLPACAGL 473
Query: 448 GMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMP 497
++ G + G + LVD+ + G LA + +P
Sbjct: 474 AALEKGREIHGHILRK-GYFSDLHVACALVDMYVKCGLLVLAQQLFDMIP 522
Score = 224 bits (570), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 148/454 (32%), Positives = 239/454 (52%), Gaps = 25/454 (5%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI T NG L + ML GV +S T VL ACAN+ ++ G+ +H++ +K G
Sbjct: 230 MISGCTMNGFSRNGLEFFIQMLNLGVDVDSATLVNVLVACANVGNLTLGRALHAYGVKAG 289
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F L+DMYSKC + + +V +M ++VSW SII+AH R L+ EAI +
Sbjct: 290 FSGGVMFNNTLLDMYSKCGNLNGANEVFVKMGE--TTIVSWTSIIAAHVREGLHYEAIGL 347
Query: 121 LKEMWVLGLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
EM GL SVV C S +G +H + K + +N +P++N++M+MYA
Sbjct: 348 FDEMQSKGLRPDIYAVTSVVHACACSNSLDKGREVHNHIKKNNMGSN-LPVSNALMNMYA 406
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K G + EA IF ++ +IVSW T+IGGY NEA L M++ + PD V
Sbjct: 407 KCGSMEEANLIFSQLPVKNIVSWNTMIGGYSQNSLPNEALQLFLDMQK-QLKPDDVTMAC 465
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
++ CA + L +H +L+ GY ++ + LV MY KCG L LA+++FD + +K
Sbjct: 466 VLPACAGLAALEKGREIHGHILRKGYFSDLHVACALVDMYVKCGLLVLAQQLFDMIPKKD 525
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEE 356
+ LWT MI GY G+ EA++ F+++ + P E++ + L AC G L +G
Sbjct: 526 MILWTVMIAGYGMHGFGKEAISTFEKMRVAGIEPEESSFTSILYACTHSGLLKEG----- 580
Query: 357 YIVLNGLESNRQVQTSLIH------MFSKCGRINKAKEVFERVPDK-DLAVWSAMINGYA 409
+ + + ++S ++ L H + + G +++A + E +P K D A+W A+++G
Sbjct: 581 WKLFDSMKSECNIEPKLEHYACMVDLLIRSGNLSRAYKFIETMPIKPDAAIWGALLSGCR 640
Query: 410 IHGMGDQALNLFYKM-QHVEGLKPDAVVYTSILS 442
IH + L K+ +H+ L+P+ Y +L+
Sbjct: 641 IH----HDVELAEKVAEHIFELEPENTRYYVLLA 670
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 79/309 (25%), Positives = 155/309 (50%), Gaps = 5/309 (1%)
Query: 203 IGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGY 262
I + +G++ A L ++ +R + +L + +++ CA++ +L +HS++ +G
Sbjct: 31 ICKFCEMGDLRNAMKLLSRSQRSEL--ELNTYCSVLQLCAELKSLEDGKRVHSIISSNGM 88
Query: 263 NNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKR 322
++ L LV MY CGDL RR+FD +L +FLW ++ YA++G E+V LF++
Sbjct: 89 AIDEVLGAKLVFMYVNCGDLVKGRRIFDGILNDKIFLWNLLMSEYAKIGNYRESVGLFEK 148
Query: 323 LLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGR 382
+ + +R + T L A + + K + Y++ G S V SLI + KCG
Sbjct: 149 MQELGIRGDSYTFTCVLKGFAASAKVRECKRVHGYVLKLGFGSYNAVVNSLIAAYFKCGE 208
Query: 383 INKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILS 442
+ A+ +F+ + D+D+ W++MI+G ++G L F +M ++ G+ D+ ++L
Sbjct: 209 VESARILFDELSDRDVVSWNSMISGCTMNGFSRNGLEFFIQMLNL-GVDVDSATLVNVLV 267
Query: 443 ACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQA 502
AC++ G + G + + G + L+D+ + G + A + +M E
Sbjct: 268 ACANVGNLTLGRA-LHAYGVKAGFSGGVMFNNTLLDMYSKCGNLNGANEVFVKMG-ETTI 325
Query: 503 QVWAPLLSA 511
W +++A
Sbjct: 326 VSWTSIIAA 334
>gi|224094835|ref|XP_002310258.1| predicted protein [Populus trichocarpa]
gi|222853161|gb|EEE90708.1| predicted protein [Populus trichocarpa]
Length = 666
Score = 421 bits (1081), Expect = e-115, Method: Compositional matrix adjust.
Identities = 222/622 (35%), Positives = 349/622 (56%), Gaps = 15/622 (2%)
Query: 1 MIRNSTNNGSFEETLSTYSSM-LQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKV 59
+I N + E LS +S M ++ G+H + F L LKAC S+ G+ +H + +K
Sbjct: 38 IISGYVNGMNTTEALSLFSKMWVEPGLHMDPFILSLALKACGLNMSVSFGESLHGYSVKT 97
Query: 60 GFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAIL 119
F FV + L+DMY K V EMP LR+VVSW +II+ RA N EA+
Sbjct: 98 DFVNSVFVGSALVDMYMKIGKVDEGCIVFKEMP--LRNVVSWTAIIAGLVRAGYNKEALA 155
Query: 120 VLKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMY 175
+MW+ + TF S + C+ G +HC K G +AN++ +MY
Sbjct: 156 YFSDMWIQKVGCDTYTFSSALKACADSGALNYGREIHCQTLKKGFTAVSF-VANTLATMY 214
Query: 176 AKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFL 235
K GK++ +F+ + + +VSWTTII V +G A +MR V+P+ F
Sbjct: 215 NKCGKLDYGLRLFESMTQRDVVSWTTIIMSNVQIGQEENAVKAFRRMRETDVSPNEFTFA 274
Query: 236 NLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEK 295
+I GCA +G + +H+ +++ G + + N +++MY+KC L+LA VF + +
Sbjct: 275 AVISGCATLGRIEWGEQLHAHVIRRGLVDSLSVANSIMAMYSKCWQLDLASTVFQGLSRR 334
Query: 296 SVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIE 355
+ W++MI GYAQ G EA + + + RPNE A+ LS C + L +GK++
Sbjct: 335 DIISWSTMISGYAQGGCGEEAFDYLSWMRREGPRPNEFAFASVLSVCGNMAILEQGKQLH 394
Query: 356 EYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGD 415
+++ GLE N VQ++LI+M+SKCG I +A ++F+ ++ W+AMINGYA HG
Sbjct: 395 AHVLCVGLEQNTMVQSALINMYSKCGSIKEASKIFDEAEYNNIVSWTAMINGYAEHGYSQ 454
Query: 416 QALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLC 475
+A++LF K+ V GL+PD+V + ++L+ACSH+G+VD G +F S+ I PS +HY C
Sbjct: 455 EAIDLFKKLPKV-GLRPDSVTFIAVLAACSHAGLVDLGFHYFNSLSKVHQICPSKDHYGC 513
Query: 476 LVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGS 535
++DLL RAGR + A I MP + VW+ LL AC H +V+ G+ AA+ +L L+P
Sbjct: 514 MIDLLCRAGRLNDAESMIQSMPFQRDDVVWSTLLRACRIHGDVDCGKRAAEKILQLDPNC 573
Query: 536 TGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSH--- 592
+I +AN++ + G WKEAA R +M + + KEPGWS ++ V FV+GDRSH
Sbjct: 574 AVTHITLANMYAAKGKWKEAAEVRKMMKSKGVVKEPGWSWIKFKDRVSAFVSGDRSHPEG 633
Query: 593 ---HLSVDIRKTLKELHIKLLE 611
+ +D+ + E+H++ ++
Sbjct: 634 EYIYDVLDLLASQAEMHMQEMD 655
Score = 208 bits (530), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 127/421 (30%), Positives = 215/421 (51%), Gaps = 16/421 (3%)
Query: 83 SSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWV-LGLELSASTFVSVVS 141
++R++ D+M R +SW +IIS + EA+ + +MWV GL + +
Sbjct: 19 NARQLFDKM--LQRDEISWTTIISGYVNGMNTTEALSLFSKMWVEPGLHMDPFILSLALK 76
Query: 142 GC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIV 197
C S G S+H K +N+ + + ++++ MY K GKV+E +F E+ ++V
Sbjct: 77 ACGLNMSVSFGESLHGYSVKTDFVNS-VFVGSALVDMYMKIGKVDEGCIVFKEMPLRNVV 135
Query: 198 SWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLL 257
SWT II G V G EA + M V D F + + CA G L +H
Sbjct: 136 SWTAIIAGLVRAGYNKEALAYFSDMWIQKVGCDTYTFSSALKACADSGALNYGREIHCQT 195
Query: 258 LKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAV 317
LK G+ + N L +MY KCG L+ R+F+++ ++ V WT++I Q+G AV
Sbjct: 196 LKKGFTAVSFVANTLATMYNKCGKLDYGLRLFESMTQRDVVSWTTIIMSNVQIGQEENAV 255
Query: 318 NLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMF 377
F+R+ +T V PNE T A +S CA LG + G+++ +++ GL + V S++ M+
Sbjct: 256 KAFRRMRETDVSPNEFTFAAVISGCATLGRIEWGEQLHAHVIRRGLVDSLSVANSIMAMY 315
Query: 378 SKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVY 437
SKC +++ A VF+ + +D+ WS MI+GYA G G++A + M+ EG +P+ +
Sbjct: 316 SKCWQLDLASTVFQGLSRRDIISWSTMISGYAQGGCGEEAFDYLSWMRR-EGPRPNEFAF 374
Query: 438 TSILSACSHSGMVDDGLSFFKSMQSN---FGIEPSIEHYLCLVDLLGRAGRFDLALKTIH 494
S+LS C + +++ G K + ++ G+E + L+++ + G A K
Sbjct: 375 ASVLSVCGNMAILEQG----KQLHAHVLCVGLEQNTMVQSALINMYSKCGSIKEASKIFD 430
Query: 495 E 495
E
Sbjct: 431 E 431
Score = 135 bits (339), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 85/289 (29%), Positives = 148/289 (51%), Gaps = 8/289 (2%)
Query: 169 NSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVT 228
N V+ K G +N AR +FD++ + +SWTTII GYVN N EA L +M V
Sbjct: 5 NLVLKNLVKTGHLNNARQLFDKMLQRDEISWTTIISGYVNGMNTTEALSL---FSKMWVE 61
Query: 229 PDLVV---FLNLIL-GCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLEL 284
P L + L+L L C ++ S+H +K+ + N + + LV MY K G ++
Sbjct: 62 PGLHMDPFILSLALKACGLNMSVSFGESLHGYSVKTDFVNSVFVGSALVDMYMKIGKVDE 121
Query: 285 ARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAE 344
VF + ++V WT++I G + GY EA+ F + V + T ++ L ACA+
Sbjct: 122 GCIVFKEMPLRNVVSWTAIIAGLVRAGYNKEALAYFSDMWIQKVGCDTYTFSSALKACAD 181
Query: 345 LGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAM 404
G+L+ G+EI + G + V +L M++KCG+++ +FE + +D+ W+ +
Sbjct: 182 SGALNYGREIHCQTLKKGFTAVSFVANTLATMYNKCGKLDYGLRLFESMTQRDVVSWTTI 241
Query: 405 INGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDG 453
I G + A+ F +M+ + + P+ + +++S C+ G ++ G
Sbjct: 242 IMSNVQIGQEENAVKAFRRMRETD-VSPNEFTFAAVISGCATLGRIEWG 289
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 65/123 (52%), Gaps = 5/123 (4%)
Query: 379 KCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMG-DQALNLFYKMQHVEGLKPDAVVY 437
K G +N A+++F+++ +D W+ +I+GY ++GM +AL+LF KM GL D +
Sbjct: 13 KTGHLNNARQLFDKMLQRDEISWTTIISGY-VNGMNTTEALSLFSKMWVEPGLHMDPFIL 71
Query: 438 TSILSACSHSGMVDDGLSFFK-SMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEM 496
+ L AC + V G S S++++F S+ LVD+ + G+ D EM
Sbjct: 72 SLALKACGLNMSVSFGESLHGYSVKTDF--VNSVFVGSALVDMYMKIGKVDEGCIVFKEM 129
Query: 497 PVE 499
P+
Sbjct: 130 PLR 132
>gi|225440839|ref|XP_002276333.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Vitis vinifera]
Length = 705
Score = 418 bits (1074), Expect = e-114, Method: Compositional matrix adjust.
Identities = 216/630 (34%), Positives = 359/630 (56%), Gaps = 18/630 (2%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
M+ G + T+ +++ G +++T P V++AC ++ ++ G+ +H V K G
Sbjct: 1 MVGGFAKVGDYINCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFG 60
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
D FV L+DMY KC + +R + D+M + R +V+W +I ++ +E++++
Sbjct: 61 LDLDHFVCAALVDMYVKCREIEDARFLFDKM--QERDLVTWTVMIGGYAECGKANESLVL 118
Query: 121 LKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGLLNN---------EIPLANSV 171
++M G+ V+VV C+ + G +MH K ++++ ++ L ++
Sbjct: 119 FEKMREEGVVPDKVAMVTVVFACA-KLG-AMH----KARIIDDYIQRKKFQLDVILGTAM 172
Query: 172 MSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDL 231
+ MYAK G V AR IFD + E +++SW+ +I Y G +A L M + PD
Sbjct: 173 IDMYAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFRMMLSSGMLPDK 232
Query: 232 VVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDA 291
+ +L+ C+ + NL + +H ++ K G + + + LV MY KC ++E AR +FD
Sbjct: 233 ITLASLLYACSDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYGKCREIEDARFLFDK 292
Query: 292 VLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKG 351
+ E+ + WT MIGGYA+ G +E++ LF ++ + V P++ + T + ACA+LG++ K
Sbjct: 293 MPERDLVTWTVMIGGYAECGNANESLVLFDKMREEGVVPDKVAMVTVVFACAKLGAMHKA 352
Query: 352 KEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIH 411
+ I++YI + + + T++I M +KCG + A+E+F+R+ +K++ WSAMI Y H
Sbjct: 353 RTIDDYIQRKKFQLDVILGTAMIDMHAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYH 412
Query: 412 GMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIE 471
G G +AL+LF M G+ P+ + S+L ACSH+G+V++GL FF M ++ + ++
Sbjct: 413 GQGRKALDLF-PMMLRSGILPNKITLVSLLYACSHAGLVEEGLRFFSLMWEDYSVRADVK 471
Query: 472 HYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTL 531
HY C+VDLLGRAGR D ALK I M VE +W L AC H +V L E AA +LL L
Sbjct: 472 HYTCVVDLLGRAGRLDEALKLIESMTVEKDEGLWGAFLGACRTHKDVVLAEKAATSLLEL 531
Query: 532 NPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRS 591
P + G+YIL++N++ +AG W++ A R LM RRL K PGW+ +E+D F GD +
Sbjct: 532 QPQNPGHYILLSNIYANAGRWEDVAKTRDLMSQRRLKKIPGWTWIEVDNKSHQFSVGDTT 591
Query: 592 HHLSVDIRKTLKELHIKLLEAGYIAEADIV 621
H S +I + LK L KL GY+ + + V
Sbjct: 592 HPRSKEIYEMLKSLGNKLELVGYVPDTNFV 621
>gi|328774759|gb|AEB39779.1| pentatricopeptide repeat protein 98 [Funaria hygrometrica]
Length = 980
Score = 417 bits (1071), Expect = e-113, Method: Compositional matrix adjust.
Identities = 214/625 (34%), Positives = 366/625 (58%), Gaps = 9/625 (1%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI + F++ + + M + GV + F +LKAC + ++ GKRVH+ + +VG
Sbjct: 277 MITGLARHRQFKQACNLFQVMEEEGVQPDKVAFVSLLKACNHPEALEQGKRVHARMKEVG 336
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+ +V T L+ MY+KC + +V + V+ R+VVSW ++I+ ++ +EA L
Sbjct: 337 LDTEIYVGTALLSMYTKCGSMEDALEVFN--LVKGRNVVSWTAMIAGFAQHGRMEEAFLF 394
Query: 121 LKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
+M G+E + TF+S++ CS +QG +H + K G + ++ + +++SMYA
Sbjct: 395 FNKMIESGIEPNRVTFMSILGACSRPSALKQGRQIHDRIIKAGYITDD-RVRTALLSMYA 453
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K G + +AR++F+ I + ++V+W +I YV + A + + + PD F +
Sbjct: 454 KCGSLMDARNVFERISKQNVVAWNAMITAYVQHEKYDNAVATFQALLKEGIKPDSSTFTS 513
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
++ C L L + SL++++G+ ++ + N LVSM+ CGDL A +F+ + E+
Sbjct: 514 ILNVCKSPDALELGKWVQSLIIRAGFESDLHIRNALVSMFVNCGDLMSAMNLFNDMPERD 573
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEE 356
+ W ++I G+ Q G A + FK + ++ V+P++ T L+ACA +L++G+ +
Sbjct: 574 LVSWNTIIAGFVQHGENQFAFDYFKMMQESGVKPDQITFTGLLNACASPEALTEGRRLHA 633
Query: 357 YIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQ 416
I L+ + V T LI M++KCG I+ A VF +P K++ W++MI GYA HG G +
Sbjct: 634 LITEAALDCDVVVGTGLISMYTKCGSIDDAHLVFHNLPKKNVYSWTSMITGYAQHGRGKE 693
Query: 417 ALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCL 476
AL LF +MQ EG+KPD + + LSAC+H+G++ +GL F+SM+ +F IEP +EHY C+
Sbjct: 694 ALELFCQMQQ-EGVKPDWITFVGALSACAHAGLIKEGLHHFESMK-DFNIEPRMEHYGCM 751
Query: 477 VDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGST 536
VDL GRAG A++ I++M V+ +++W LL AC H +VEL E A+ L L+P
Sbjct: 752 VDLFGRAGLLHEAVEFINKMQVKPDSRLWGALLGACQVHLDVELAEKVAQKKLELDPNDD 811
Query: 537 GNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSV 596
G Y++++N++ +AGMWKE R +M DR + K+PG S +E+DG V +F + D++H
Sbjct: 812 GVYVILSNIYAAAGMWKEVTKMRKVMLDRGVVKKPGQSWIEVDGRVHIFCSDDKTHPQIE 871
Query: 597 DIRKTLKELHIKLLEAGYIAEADIV 621
+I L LH+++ + GY+ + V
Sbjct: 872 EIHAELGRLHMEMKKLGYVPDTRYV 896
Score = 268 bits (684), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 146/509 (28%), Positives = 268/509 (52%), Gaps = 10/509 (1%)
Query: 11 FEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTG 70
+EE + M+Q GV + +TF +L ACA+ ++ G + S +L G+ D FV T
Sbjct: 186 YEEAFRLHEQMVQDGVKPDKYTFVYMLNACADAKNVDKGGELFSLILNAGWDTDLFVGTA 245
Query: 71 LIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLE 130
LI+M+ KC + KV + +P R +++W S+I+ +R +A + + M G++
Sbjct: 246 LINMHIKCGGVDDALKVFNNLP--RRDLITWTSMITGLARHRQFKQACNLFQVMEEEGVQ 303
Query: 131 LSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARS 186
FVS++ C + QG +H + ++GL + EI + +++SMY K G + +A
Sbjct: 304 PDKVAFVSLLKACNHPEALEQGKRVHARMKEVGL-DTEIYVGTALLSMYTKCGSMEDALE 362
Query: 187 IFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGN 246
+F+ + ++VSWT +I G+ G + EAF N+M + P+ V F++++ C++
Sbjct: 363 VFNLVKGRNVVSWTAMIAGFAQHGRMEEAFLFFNKMIESGIEPNRVTFMSILGACSRPSA 422
Query: 247 LFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGG 306
L +H ++K+GY +D + L+SMY KCG L AR VF+ + +++V W +MI
Sbjct: 423 LKQGRQIHDRIIKAGYITDDRVRTALLSMYAKCGSLMDARNVFERISKQNVVAWNAMITA 482
Query: 307 YAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESN 366
Y Q AV F+ LLK ++P+ +T + L+ C +L GK ++ I+ G ES+
Sbjct: 483 YVQHEKYDNAVATFQALLKEGIKPDSSTFTSILNVCKSPDALELGKWVQSLIIRAGFESD 542
Query: 367 RQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQH 426
++ +L+ MF CG + A +F +P++DL W+ +I G+ HG A + ++KM
Sbjct: 543 LHIRNALVSMFVNCGDLMSAMNLFNDMPERDLVSWNTIIAGFVQHGENQFAFD-YFKMMQ 601
Query: 427 VEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRF 486
G+KPD + +T +L+AC+ + +G ++ + ++ + L+ + + G
Sbjct: 602 ESGVKPDQITFTGLLNACASPEALTEGRR-LHALITEAALDCDVVVGTGLISMYTKCGSI 660
Query: 487 DLALKTIHEMPVEVQAQVWAPLLSACMKH 515
D A H +P + W +++ +H
Sbjct: 661 DDAHLVFHNLP-KKNVYSWTSMITGYAQH 688
Score = 246 bits (629), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 143/510 (28%), Positives = 268/510 (52%), Gaps = 8/510 (1%)
Query: 9 GSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQ 68
G E + S+ + + T+ +L+ C ++ DG+R+H+H+ Q D F+
Sbjct: 83 GQLSEAMLVLLSVDSPHIQIHRQTYSSLLQLCIKHKNLGDGERIHNHIKFSKIQPDIFMW 142
Query: 69 TGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLG 128
LI MY+KC + S++++ DEMP + V SWN ++ + + +EA + ++M G
Sbjct: 143 NMLISMYAKCGNTNSAKQIFDEMPD--KDVYSWNLLLGGYVQHRRYEEAFRLHEQMVQDG 200
Query: 129 LELSASTFVSVVSGCSFRQGISMHCCVYKLGL---LNNEIPLANSVMSMYAKFGKVNEAR 185
++ TFV +++ C+ + + ++ L L + ++ + ++++M+ K G V++A
Sbjct: 201 VKPDKYTFVYMLNACADAKNVDKGGELFSLILNAGWDTDLFVGTALINMHIKCGGVDDAL 260
Query: 186 SIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVG 245
+F+ + +++WT++I G +A L M V PD V F++L+ C
Sbjct: 261 KVFNNLPRRDLITWTSMITGLARHRQFKQACNLFQVMEEEGVQPDKVAFVSLLKACNHPE 320
Query: 246 NLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIG 305
L +H+ + + G + E + L+SMYTKCG +E A VF+ V ++V WT+MI
Sbjct: 321 ALEQGKRVHARMKEVGLDTEIYVGTALLSMYTKCGSMEDALEVFNLVKGRNVVSWTAMIA 380
Query: 306 GYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLES 365
G+AQ G EA F +++++ + PN T + L AC+ +L +G++I + I+ G +
Sbjct: 381 GFAQHGRMEEAFLFFNKMIESGIEPNRVTFMSILGACSRPSALKQGRQIHDRIIKAGYIT 440
Query: 366 NRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQ 425
+ +V+T+L+ M++KCG + A+ VFER+ +++ W+AMI Y H D A+ F +
Sbjct: 441 DDRVRTALLSMYAKCGSLMDARNVFERISKQNVVAWNAMITAYVQHEKYDNAVATFQALL 500
Query: 426 HVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGR 485
EG+KPD+ +TSIL+ C ++ G + +S+ G E + LV + G
Sbjct: 501 K-EGIKPDSSTFTSILNVCKSPDALELG-KWVQSLIIRAGFESDLHIRNALVSMFVNCGD 558
Query: 486 FDLALKTIHEMPVEVQAQVWAPLLSACMKH 515
A+ ++MP E W +++ ++H
Sbjct: 559 LMSAMNLFNDMP-ERDLVSWNTIIAGFVQH 587
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 115/365 (31%), Positives = 198/365 (54%), Gaps = 6/365 (1%)
Query: 93 VRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGC----SFRQG 148
V +++ N+ ++ S+A EA+LVL + +++ T+ S++ C + G
Sbjct: 64 VDIKNTQRANAFLNRLSKAGQLSEAMLVLLSVDSPHIQIHRQTYSSLLQLCIKHKNLGDG 123
Query: 149 ISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVN 208
+H + K + +I + N ++SMYAK G N A+ IFDE+ + + SW ++GGYV
Sbjct: 124 ERIHNHI-KFSKIQPDIFMWNMLISMYAKCGNTNSAKQIFDEMPDKDVYSWNLLLGGYVQ 182
Query: 209 VGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPL 268
EAF L QM + V PD F+ ++ CA N+ + SL+L +G++ + +
Sbjct: 183 HRRYEEAFRLHEQMVQDGVKPDKYTFVYMLNACADAKNVDKGGELFSLILNAGWDTDLFV 242
Query: 269 DNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSV 328
L++M+ KCG ++ A +VF+ + + + WTSMI G A+ +A NLF+ + + V
Sbjct: 243 GTALINMHIKCGGVDDALKVFNNLPRRDLITWTSMITGLARHRQFKQACNLFQVMEEEGV 302
Query: 329 RPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKE 388
+P++ + L AC +L +GK + + GL++ V T+L+ M++KCG + A E
Sbjct: 303 QPDKVAFVSLLKACNHPEALEQGKRVHARMKEVGLDTEIYVGTALLSMYTKCGSMEDALE 362
Query: 389 VFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSG 448
VF V +++ W+AMI G+A HG ++A F KM G++P+ V + SIL ACS
Sbjct: 363 VFNLVKGRNVVSWTAMIAGFAQHGRMEEAFLFFNKMIE-SGIEPNRVTFMSILGACSRPS 421
Query: 449 MVDDG 453
+ G
Sbjct: 422 ALKQG 426
>gi|78183583|dbj|BAD67156.2| PpPPR_77 [Physcomitrella patens]
Length = 1106
Score = 416 bits (1068), Expect = e-113, Method: Compositional matrix adjust.
Identities = 221/613 (36%), Positives = 347/613 (56%), Gaps = 8/613 (1%)
Query: 13 ETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLI 72
E + Y M GV TF +L ACAN ++ DGK +H +L+ G + + + L+
Sbjct: 414 EAMRLYKQMQSEGVKPGRVTFLHLLSACANSSAYADGKMIHEDILRSGIKSNGHLANALM 473
Query: 73 DMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELS 132
+MY +C + ++ V + + R V+SWNS+I+ H++ + A + +EM LE
Sbjct: 474 NMYRRCGSLMEAQNVFE--GTQARDVISWNSMIAGHAQHGSYETAYKLFQEMQNEELEPD 531
Query: 133 ASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIF 188
TF SV+SGC + G +H + + GL ++ L N++++MY + G + +AR++F
Sbjct: 532 NITFASVLSGCKNPEALELGKQIHGRITESGL-QLDVNLGNALINMYIRCGSLQDARNVF 590
Query: 189 DEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLF 248
+ ++SWT +IGG + G +A L QM+ P F +++ C L
Sbjct: 591 HSLQHRDVMSWTAMIGGCADQGEDMKAIELFWQMQNEGFRPVKSTFSSILKVCTSSACLD 650
Query: 249 LALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYA 308
+ + +L SGY + + N L+S Y+K G + AR VFD + + + W +I GYA
Sbjct: 651 EGKKVIAYILNSGYELDTGVGNALISAYSKSGSMTDAREVFDKMPSRDIVSWNKIIAGYA 710
Query: 309 QLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQ 368
Q G AV ++ + V PN+ + + L+AC+ +L +GK + IV L+ + +
Sbjct: 711 QNGLGQTAVEFAYQMQEQDVVPNKFSFVSLLNACSSFSALEEGKRVHAEIVKRKLQGDVR 770
Query: 369 VQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVE 428
V +LI M++KCG +A+EVF+ + +K++ W+AMIN YA HG+ +AL F M+ E
Sbjct: 771 VGAALISMYAKCGSQGEAQEVFDNIIEKNVVTWNAMINAYAQHGLASKALGFFNCMEK-E 829
Query: 429 GLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDL 488
G+KPD +TSILSAC+H+G+V +G F SM+S +G+ P+IEHY CLV LLGRA RF
Sbjct: 830 GIKPDGSTFTSILSACNHAGLVLEGYQIFSSMESEYGVLPTIEHYGCLVGLLGRARRFQE 889
Query: 489 ALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTS 548
A I++MP A VW LL AC H N+ L E+AA N L LN + YIL++N++ +
Sbjct: 890 AETLINQMPFPPDAAVWETLLGACRIHGNIALAEHAANNALKLNARNPAVYILLSNVYAA 949
Query: 549 AGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKELHIK 608
AG W + A R +M+ R + KEPG S +E+D + F+A DRSH + +I LK L ++
Sbjct: 950 AGRWDDVAKIRRVMEGRGIRKEPGRSWIEVDNIIHEFIAADRSHPETAEIYAELKRLSVE 1009
Query: 609 LLEAGYIAEADIV 621
+ EAGY + V
Sbjct: 1010 MEEAGYFPDTQHV 1022
Score = 263 bits (673), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 140/445 (31%), Positives = 248/445 (55%), Gaps = 8/445 (1%)
Query: 13 ETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLI 72
E Y M GV N T+ +L AC+ ++ GK +HSH+ + G D + LI
Sbjct: 313 EAFEQYYRMRSDGVALNRTTYLSILNACSTSKALEAGKLIHSHISEDGHSSDVQIGNALI 372
Query: 73 DMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELS 132
MY++C D +R++ MP R ++SWN+II+ ++R EA+ + K+M G++
Sbjct: 373 SMYARCGDLPKARELFYTMPK--RDLISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPG 430
Query: 133 ASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIF 188
TF+ ++S C ++ G +H + + G+ +N LAN++M+MY + G + EA+++F
Sbjct: 431 RVTFLHLLSACANSSAYADGKMIHEDILRSGIKSNG-HLANALMNMYRRCGSLMEAQNVF 489
Query: 189 DEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLF 248
+ ++SW ++I G+ G+ A+ L +M+ + PD + F +++ GC L
Sbjct: 490 EGTQARDVISWNSMIAGHAQHGSYETAYKLFQEMQNEELEPDNITFASVLSGCKNPEALE 549
Query: 249 LALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYA 308
L +H + +SG + L N L++MY +CG L+ AR VF ++ + V WT+MIGG A
Sbjct: 550 LGKQIHGRITESGLQLDVNLGNALINMYIRCGSLQDARNVFHSLQHRDVMSWTAMIGGCA 609
Query: 309 QLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQ 368
G +A+ LF ++ RP ++T ++ L C L +GK++ YI+ +G E +
Sbjct: 610 DQGEDMKAIELFWQMQNEGFRPVKSTFSSILKVCTSSACLDEGKKVIAYILNSGYELDTG 669
Query: 369 VQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVE 428
V +LI +SK G + A+EVF+++P +D+ W+ +I GYA +G+G A+ Y+MQ +
Sbjct: 670 VGNALISAYSKSGSMTDAREVFDKMPSRDIVSWNKIIAGYAQNGLGQTAVEFAYQMQE-Q 728
Query: 429 GLKPDAVVYTSILSACSHSGMVDDG 453
+ P+ + S+L+ACS +++G
Sbjct: 729 DVVPNKFSFVSLLNACSSFSALEEG 753
Score = 241 bits (616), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 139/456 (30%), Positives = 237/456 (51%), Gaps = 10/456 (2%)
Query: 2 IRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGF 61
+RN + G E +S T T+ +L+ C + + KR+H+ +++
Sbjct: 1 MRNERHCGPDREDVSNTHQPRPTETE--RATYVALLQNCTRKRLLPEAKRIHAQMVEAWV 58
Query: 62 QQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVL 121
D F+ LI+MY KC + + +V EMP R V+SWNS+IS +++ +A +
Sbjct: 59 GPDIFLSNLLINMYVKCRSVLDAHQVFKEMP--RRDVISWNSLISCYAQQGFKKKAFQLF 116
Query: 122 KEMWVLGLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAK 177
+EM G + T++S+++ C G +H + K G + + NS++SMY K
Sbjct: 117 EEMQNAGFIPNKITYISILTACYSPAELENGKKIHSQIIKAG-YQRDPRVQNSLLSMYGK 175
Query: 178 FGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNL 237
G + AR +F I +VS+ T++G Y V E GL QM ++PD V ++NL
Sbjct: 176 CGDLPRARQVFAGISPRDVVSYNTMLGLYAQKAYVKECLGLFGQMSSEGISPDKVTYINL 235
Query: 238 ILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSV 297
+ L +H L ++ G N++ + LV+M +CGD++ A++ F ++ V
Sbjct: 236 LDAFTTPSMLDEGKRIHKLTVEEGLNSDIRVGTALVTMCVRCGDVDSAKQAFKGTADRDV 295
Query: 298 FLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEY 357
++ ++I AQ G+ EA + R+ V N T + L+AC+ +L GK I +
Sbjct: 296 VVYNALIAALAQHGHNVEAFEQYYRMRSDGVALNRTTYLSILNACSTSKALEAGKLIHSH 355
Query: 358 IVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQA 417
I +G S+ Q+ +LI M+++CG + KA+E+F +P +DL W+A+I GYA +A
Sbjct: 356 ISEDGHSSDVQIGNALISMYARCGDLPKARELFYTMPKRDLISWNAIIAGYARREDRGEA 415
Query: 418 LNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDG 453
+ L+ +MQ EG+KP V + +LSAC++S DG
Sbjct: 416 MRLYKQMQS-EGVKPGRVTFLHLLSACANSSAYADG 450
Score = 236 bits (601), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 143/491 (29%), Positives = 253/491 (51%), Gaps = 11/491 (2%)
Query: 12 EETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGL 71
+E L + M G+ + T+ +L A + + +GKR+H ++ G D V T L
Sbjct: 211 KECLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDEGKRIHKLTVEEGLNSDIRVGTAL 270
Query: 72 IDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLEL 131
+ M +C D S+++ R VV +N++I+A ++ N EA M G+ L
Sbjct: 271 VTMCVRCGDVDSAKQAFKGTADR--DVVVYNALIAALAQHGHNVEAFEQYYRMRSDGVAL 328
Query: 132 SASTFVSVVSGCSFRQGIS----MHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSI 187
+ +T++S+++ CS + + +H + + G ++++ + N+++SMYA+ G + +AR +
Sbjct: 329 NRTTYLSILNACSTSKALEAGKLIHSHISEDGH-SSDVQIGNALISMYARCGDLPKAREL 387
Query: 188 FDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNL 247
F + + ++SW II GY + EA L QM+ V P V FL+L+ CA
Sbjct: 388 FYTMPKRDLISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHLLSACANSSAY 447
Query: 248 FLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGY 307
+H +L+SG + L N L++MY +CG L A+ VF+ + V W SMI G+
Sbjct: 448 ADGKMIHEDILRSGIKSNGHLANALMNMYRRCGSLMEAQNVFEGTQARDVISWNSMIAGH 507
Query: 308 AQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNR 367
AQ G A LF+ + + P+ T A+ LS C +L GK+I I +GL+ +
Sbjct: 508 AQHGSYETAYKLFQEMQNEELEPDNITFASVLSGCKNPEALELGKQIHGRITESGLQLDV 567
Query: 368 QVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHV 427
+ +LI+M+ +CG + A+ VF + +D+ W+AMI G A G +A+ LF++MQ+
Sbjct: 568 NLGNALINMYIRCGSLQDARNVFHSLQHRDVMSWTAMIGGCADQGEDMKAIELFWQMQN- 626
Query: 428 EGLKPDAVVYTSILSACSHSGMVDDGLSFFKS-MQSNFGIEPSIEHYLCLVDLLGRAGRF 486
EG +P ++SIL C+ S +D+G + S + ++ + + L+ ++G
Sbjct: 627 EGFRPVKSTFSSILKVCTSSACLDEGKKVIAYILNSGYELDTGVGN--ALISAYSKSGSM 684
Query: 487 DLALKTIHEMP 497
A + +MP
Sbjct: 685 TDAREVFDKMP 695
Score = 235 bits (599), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 137/516 (26%), Positives = 262/516 (50%), Gaps = 10/516 (1%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+I G ++ + M G N T+ +L AC + + +GK++HS ++K G
Sbjct: 99 LISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTACYSPAELENGKKIHSQIIKAG 158
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+Q+D VQ L+ MY KC D +R+V + R VVS+N+++ +++ E + +
Sbjct: 159 YQRDPRVQNSLLSMYGKCGDLPRARQVF--AGISPRDVVSYNTMLGLYAQKAYVKECLGL 216
Query: 121 LKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
+M G+ T+++++ + +G +H + G LN++I + ++++M
Sbjct: 217 FGQMSSEGISPDKVTYINLLDAFTTPSMLDEGKRIHKLTVEEG-LNSDIRVGTALVTMCV 275
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
+ G V+ A+ F + +V + +I G+ EAF +MR V + +L+
Sbjct: 276 RCGDVDSAKQAFKGTADRDVVVYNALIAALAQHGHNVEAFEQYYRMRSDGVALNRTTYLS 335
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
++ C+ L +HS + + G++++ + N L+SMY +CGDL AR +F + ++
Sbjct: 336 ILNACSTSKALEAGKLIHSHISEDGHSSDVQIGNALISMYARCGDLPKARELFYTMPKRD 395
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEE 356
+ W ++I GYA+ EA+ L+K++ V+P T LSACA + + GK I E
Sbjct: 396 LISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHLLSACANSSAYADGKMIHE 455
Query: 357 YIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQ 416
I+ +G++SN + +L++M+ +CG + +A+ VFE +D+ W++MI G+A HG +
Sbjct: 456 DILRSGIKSNGHLANALMNMYRRCGSLMEAQNVFEGTQARDVISWNSMIAGHAQHGSYET 515
Query: 417 ALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCL 476
A LF +MQ+ E L+PD + + S+LS C + ++ G + + G++ + L
Sbjct: 516 AYKLFQEMQNEE-LEPDNITFASVLSGCKNPEALELGKQIHGRITES-GLQLDVNLGNAL 573
Query: 477 VDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSAC 512
+++ R G A H + W ++ C
Sbjct: 574 INMYIRCGSLQDARNVFHSLQ-HRDVMSWTAMIGGC 608
Score = 184 bits (468), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 107/372 (28%), Positives = 192/372 (51%), Gaps = 7/372 (1%)
Query: 130 ELSASTFVSVVSGCSFR----QGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEAR 185
E +T+V+++ C+ + + +H + + + +I L+N +++MY K V +A
Sbjct: 24 ETERATYVALLQNCTRKRLLPEAKRIHAQMVE-AWVGPDIFLSNLLINMYVKCRSVLDAH 82
Query: 186 SIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVG 245
+F E+ ++SW ++I Y G +AF L +M+ P+ + +++++ C
Sbjct: 83 QVFKEMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTACYSPA 142
Query: 246 NLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIG 305
L +HS ++K+GY + + N L+SMY KCGDL AR+VF + + V + +M+G
Sbjct: 143 ELENGKKIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGISPRDVVSYNTMLG 202
Query: 306 GYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLES 365
YAQ Y E + LF ++ + P++ T L A L +GK I + V GL S
Sbjct: 203 LYAQKAYVKECLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDEGKRIHKLTVEEGLNS 262
Query: 366 NRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQ 425
+ +V T+L+ M +CG ++ AK+ F+ D+D+ V++A+I A HG +A +Y+M+
Sbjct: 263 DIRVGTALVTMCVRCGDVDSAKQAFKGTADRDVVVYNALIAALAQHGHNVEAFEQYYRMR 322
Query: 426 HVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGR 485
+G+ + Y SIL+ACS S ++ G S S G ++ L+ + R G
Sbjct: 323 S-DGVALNRTTYLSILNACSTSKALEAG-KLIHSHISEDGHSSDVQIGNALISMYARCGD 380
Query: 486 FDLALKTIHEMP 497
A + + MP
Sbjct: 381 LPKARELFYTMP 392
>gi|147857367|emb|CAN80796.1| hypothetical protein VITISV_034275 [Vitis vinifera]
Length = 771
Score = 415 bits (1067), Expect = e-113, Method: Compositional matrix adjust.
Identities = 221/599 (36%), Positives = 349/599 (58%), Gaps = 12/599 (2%)
Query: 30 SFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLD 89
+F P VLKAC ++ GK +H VLK G +D FV L+ MY +C+ +R V D
Sbjct: 94 NFMAPSVLKACGQVSWTQLGKEIHGFVLKKGLDRDVFVGNALMLMYGECACVEYARLVFD 153
Query: 90 EMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVS----GCSF 145
+M R VVSW+++I + SR D A+ +++EM + + S VS+V+ +
Sbjct: 154 KM--MERDVVSWSTMIRSLSRNKEFDMALELIREMNFMQVRPSEVAMVSMVNLFADTANM 211
Query: 146 RQGISMHCCVYKLGLLNNE---IPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTI 202
R G +MH V + NNE +P +++ MYAK G + AR +F+ + + ++VSWT +
Sbjct: 212 RMGKAMHAYVIRNS--NNEHMGVPTTTALLDMYAKCGHLGLARQLFNGLTQKTVVSWTAM 269
Query: 203 IGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGY 262
I G + + E L +M+ ++ P+ + L+LI+ C G L L +H+ +L++G+
Sbjct: 270 IAGCIRSNRLEEGTKLFIRMQEENIFPNEITMLSLIVECGFTGALQLGKQLHAYILRNGF 329
Query: 263 NNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKR 322
+ L LV MY KC D+ AR +FD+ + V +WT+M+ YAQ +A NLF +
Sbjct: 330 SVSLALATALVDMYGKCSDIRNARALFDSTQNRDVMIWTAMLSAYAQANCIDQAFNLFDQ 389
Query: 323 LLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGR 382
+ + VRP + T+ + LS CA G+L GK + YI +E + + T+L+ M++KCG
Sbjct: 390 MRTSGVRPTKVTIVSLLSLCAVAGALDLGKWVHSYIDKERVEVDCILNTALVDMYAKCGD 449
Query: 383 INKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILS 442
IN A +F +D+ +W+A+I G+A+HG G++AL++F +M+ +G+KP+ + + +L
Sbjct: 450 INAAGRLFIEAISRDICMWNAIITGFAMHGYGEEALDIFAEMER-QGVKPNDITFIGLLH 508
Query: 443 ACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQA 502
ACSH+G+V +G F+ M FG+ P IEHY C+VDLLGRAG D A + I MP++
Sbjct: 509 ACSHAGLVTEGKKLFEKMVHTFGLVPQIEHYGCMVDLLGRAGLLDEAHEMIKSMPIKPNT 568
Query: 503 QVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLM 562
VW L++AC H N +LGE AA LL + P + G +LM+N++ +A W +AA R M
Sbjct: 569 IVWGALVAACRLHKNPQLGELAATQLLEIEPENCGYNVLMSNIYAAANRWSDAAGVRKTM 628
Query: 563 DDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKELHIKLLEAGYIAEADIV 621
+ KEPG S +E++G+V F+ GD+SH I + L E+ KL EAGY+ + V
Sbjct: 629 KTVGMKKEPGHSVIEVNGTVHEFLMGDQSHPQIRRINEMLAEMRRKLNEAGYVPDTSTV 687
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/248 (27%), Positives = 120/248 (48%), Gaps = 5/248 (2%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI + EE + M + + N T ++ C ++ GK++H+++L+ G
Sbjct: 269 MIAGCIRSNRLEEGTKLFIRMQEENIFPNEITMLSLIVECGFTGALQLGKQLHAYILRNG 328
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F + T L+DMY KCSD ++R + D + R V+ W +++SA+++A D+A +
Sbjct: 329 FSVSLALATALVDMYGKCSDIRNARALFDS--TQNRDVMIWTAMLSAYAQANCIDQAFNL 386
Query: 121 LKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKL---GLLNNEIPLANSVMSMYAK 177
+M G+ + T VS++S C+ + + V+ + + L +++ MYAK
Sbjct: 387 FDQMRTSGVRPTKVTIVSLLSLCAVAGALDLGKWVHSYIDKERVEVDCILNTALVDMYAK 446
Query: 178 FGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNL 237
G +N A +F E I W II G+ G EA + +M R V P+ + F+ L
Sbjct: 447 CGDINAAGRLFIEAISRDICMWNAIITGFAMHGYGEEALDIFAEMERQGVKPNDITFIGL 506
Query: 238 ILGCAQVG 245
+ C+ G
Sbjct: 507 LHACSHAG 514
Score = 39.7 bits (91), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 22/101 (21%), Positives = 51/101 (50%), Gaps = 2/101 (1%)
Query: 8 NGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKV-GFQQDAF 66
+G EE L ++ M + GV N TF +L AC++ + +GK++ ++ G
Sbjct: 478 HGYGEEALDIFAEMERQGVKPNDITFIGLLHACSHAGLVTEGKKLFEKMVHTFGLVPQIE 537
Query: 67 VQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISA 107
++D+ + + +++ MP++ ++V W ++++A
Sbjct: 538 HYGCMVDLLGRAGLLDEAHEMIKSMPIKPNTIV-WGALVAA 577
>gi|328774757|gb|AEB39778.1| pentatricopeptide repeat protein 77 [Funaria hygrometrica]
Length = 1161
Score = 415 bits (1066), Expect = e-113, Method: Compositional matrix adjust.
Identities = 218/613 (35%), Positives = 346/613 (56%), Gaps = 8/613 (1%)
Query: 13 ETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLI 72
E + Y M GV TF +L AC N ++ DGK +H +L+ G + + + L+
Sbjct: 469 EAMKLYKQMQSEGVKPGRVTFLHLLSACTNSSAYSDGKMIHEDILRSGIKSNGHLANALM 528
Query: 73 DMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELS 132
+MY +C + ++ V + R R ++SWNS+I+ H++ + A + EM GLE
Sbjct: 529 NMYRRCGSIMEAQNVFE--GTRARDIISWNSMIAGHAQHGSYEAAYKLFLEMKKEGLEPD 586
Query: 133 ASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIF 188
TF SV+ GC + G +H + + GL ++ L N++++MY + G + +A +F
Sbjct: 587 KITFASVLVGCKNPEALELGRQIHMLIIESGL-QLDVNLGNALINMYIRCGSLQDAYEVF 645
Query: 189 DEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLF 248
+ +++SWT +IGG+ + G +AF L QM+ P F +++ C L
Sbjct: 646 HSLRHRNVMSWTAMIGGFADQGEDRKAFELFWQMQNDGFKPVKSTFSSILKACMSSACLD 705
Query: 249 LALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYA 308
+ + +L SGY + + N L+S Y+K G + AR+VFD + + + W MI GYA
Sbjct: 706 EGKKVIAHILNSGYELDTGVGNALISAYSKSGSMTDARKVFDKMPNRDIMSWNKMIAGYA 765
Query: 309 QLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQ 368
Q G A+ ++ + V N+ + + L+AC+ +L +GK + IV ++ + +
Sbjct: 766 QNGLGGTALQFAYQMQEQGVVLNKFSFVSILNACSSFSALEEGKRVHAEIVKRKMQGDVR 825
Query: 369 VQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVE 428
V +LI M++KCG + +A+EVF+ +K++ W+AMIN YA HG+ +AL+ F M E
Sbjct: 826 VGAALISMYAKCGSLEEAQEVFDNFTEKNVVTWNAMINAYAQHGLASKALDFFNCMDK-E 884
Query: 429 GLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDL 488
G+KPD +TSILSAC+HSG+V +G F S++S G+ P+IEHY CLV LLGRAGRF
Sbjct: 885 GIKPDGSTFTSILSACNHSGLVMEGNRIFSSLESQHGLSPTIEHYGCLVGLLGRAGRFQE 944
Query: 489 ALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTS 548
A I++MP A VW LL AC H NV L E+AA N L LN + Y+L++N++ +
Sbjct: 945 AETLINQMPFPPDAAVWETLLGACRIHGNVALAEHAANNALKLNARNPAVYVLLSNVYAA 1004
Query: 549 AGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKELHIK 608
AG W + A R +M+ R + KEPG S +E+D + F+A DRSH + +I + LK L ++
Sbjct: 1005 AGRWDDVAKIRRVMEGRGIRKEPGRSWIEVDNIIHEFIAADRSHPETAEIYEELKRLSLE 1064
Query: 609 LLEAGYIAEADIV 621
+ AGY + V
Sbjct: 1065 MERAGYSPDTQYV 1077
Score = 276 bits (705), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 154/519 (29%), Positives = 284/519 (54%), Gaps = 20/519 (3%)
Query: 6 TNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDA 65
+G +EE Y M GV N T+ VL AC+ ++ G+ +HSH+ +VG D
Sbjct: 361 AQHGHYEEAFEQYYQMRSDGVVMNRTTYLSVLNACSTSKALGAGELIHSHISEVGHSSDV 420
Query: 66 FVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMW 125
+ LI MY++C D +R++ + MP R ++SWN+II+ ++R EA+ + K+M
Sbjct: 421 QIGNSLISMYARCGDLPRARELFNTMPK--RDLISWNAIIAGYARREDRGEAMKLYKQMQ 478
Query: 126 VLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKV 181
G++ TF+ ++S C+ + G +H + + G+ +N LAN++M+MY + G +
Sbjct: 479 SEGVKPGRVTFLHLLSACTNSSAYSDGKMIHEDILRSGIKSNG-HLANALMNMYRRCGSI 537
Query: 182 NEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGC 241
EA+++F+ I+SW ++I G+ G+ A+ L +M++ + PD + F ++++GC
Sbjct: 538 MEAQNVFEGTRARDIISWNSMIAGHAQHGSYEAAYKLFLEMKKEGLEPDKITFASVLVGC 597
Query: 242 AQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWT 301
L L +H L+++SG + L N L++MY +CG L+ A VF ++ ++V WT
Sbjct: 598 KNPEALELGRQIHMLIIESGLQLDVNLGNALINMYIRCGSLQDAYEVFHSLRHRNVMSWT 657
Query: 302 SMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLN 361
+MIGG+A G +A LF ++ +P ++T ++ L AC L +GK++ +I+ +
Sbjct: 658 AMIGGFADQGEDRKAFELFWQMQNDGFKPVKSTFSSILKACMSSACLDEGKKVIAHILNS 717
Query: 362 GLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLF 421
G E + V +LI +SK G + A++VF+++P++D+ W+ MI GYA +G+G AL
Sbjct: 718 GYELDTGVGNALISAYSKSGSMTDARKVFDKMPNRDIMSWNKMIAGYAQNGLGGTALQFA 777
Query: 422 YKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFF-----KSMQSNFGIEPSIEHYLCL 476
Y+MQ +G+ + + SIL+ACS +++G + MQ + + + L
Sbjct: 778 YQMQE-QGVVLNKFSFVSILNACSSFSALEEGKRVHAEIVKRKMQGDVRVGAA------L 830
Query: 477 VDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKH 515
+ + + G + A + + + E W +++A +H
Sbjct: 831 ISMYAKCGSLEEA-QEVFDNFTEKNVVTWNAMINAYAQH 868
Score = 239 bits (611), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 141/491 (28%), Positives = 255/491 (51%), Gaps = 11/491 (2%)
Query: 12 EETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGL 71
EE + + M G+ + T+ +L A + + +GKR+H + G D V T L
Sbjct: 266 EECIGLFGQMSSEGIPPDKVTYINLLDAFTTPSMLDEGKRIHKLAVNEGLNSDIRVGTAL 325
Query: 72 IDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLEL 131
M+ +C D +++ L+ R VV +N++I+A ++ +EA +M G+ +
Sbjct: 326 ATMFVRCGDVAGAKQALEAFADR--DVVVYNALIAALAQHGHYEEAFEQYYQMRSDGVVM 383
Query: 132 SASTFVSVVSGCSFRQGIS----MHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSI 187
+ +T++SV++ CS + + +H + ++G ++++ + NS++SMYA+ G + AR +
Sbjct: 384 NRTTYLSVLNACSTSKALGAGELIHSHISEVGH-SSDVQIGNSLISMYARCGDLPRAREL 442
Query: 188 FDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNL 247
F+ + + ++SW II GY + EA L QM+ V P V FL+L+ C
Sbjct: 443 FNTMPKRDLISWNAIIAGYARREDRGEAMKLYKQMQSEGVKPGRVTFLHLLSACTNSSAY 502
Query: 248 FLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGY 307
+H +L+SG + L N L++MY +CG + A+ VF+ + + W SMI G+
Sbjct: 503 SDGKMIHEDILRSGIKSNGHLANALMNMYRRCGSIMEAQNVFEGTRARDIISWNSMIAGH 562
Query: 308 AQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNR 367
AQ G A LF + K + P++ T A+ L C +L G++I I+ +GL+ +
Sbjct: 563 AQHGSYEAAYKLFLEMKKEGLEPDKITFASVLVGCKNPEALELGRQIHMLIIESGLQLDV 622
Query: 368 QVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHV 427
+ +LI+M+ +CG + A EVF + +++ W+AMI G+A G +A LF++MQ+
Sbjct: 623 NLGNALINMYIRCGSLQDAYEVFHSLRHRNVMSWTAMIGGFADQGEDRKAFELFWQMQN- 681
Query: 428 EGLKPDAVVYTSILSACSHSGMVDDGLSFFKS-MQSNFGIEPSIEHYLCLVDLLGRAGRF 486
+G KP ++SIL AC S +D+G + S + ++ + + L+ ++G
Sbjct: 682 DGFKPVKSTFSSILKACMSSACLDEGKKVIAHILNSGYELDTGVGN--ALISAYSKSGSM 739
Query: 487 DLALKTIHEMP 497
A K +MP
Sbjct: 740 TDARKVFDKMP 750
Score = 233 bits (595), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 134/499 (26%), Positives = 259/499 (51%), Gaps = 7/499 (1%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+I G ++ + M G + T+ +L AC + + GK++HS +++ G
Sbjct: 154 LISCYAQQGFKKKAFQLFEEMQTAGFIPSKITYISILTACCSPAELEYGKKIHSKIIEAG 213
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+Q+D VQ L++MY KC D S+R+V + R VVS+N+++ +++ +E I +
Sbjct: 214 YQRDPRVQNSLLNMYGKCEDLPSARQVFS--GIYRRDVVSYNTMLGLYAQKAYVEECIGL 271
Query: 121 LKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGL---LNNEIPLANSVMSMYAK 177
+M G+ T+++++ + + ++KL + LN++I + ++ +M+ +
Sbjct: 272 FGQMSSEGIPPDKVTYINLLDAFTTPSMLDEGKRIHKLAVNEGLNSDIRVGTALATMFVR 331
Query: 178 FGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNL 237
G V A+ + + +V + +I G+ EAF QMR V + +L++
Sbjct: 332 CGDVAGAKQALEAFADRDVVVYNALIAALAQHGHYEEAFEQYYQMRSDGVVMNRTTYLSV 391
Query: 238 ILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSV 297
+ C+ L +HS + + G++++ + N L+SMY +CGDL AR +F+ + ++ +
Sbjct: 392 LNACSTSKALGAGELIHSHISEVGHSSDVQIGNSLISMYARCGDLPRARELFNTMPKRDL 451
Query: 298 FLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEY 357
W ++I GYA+ EA+ L+K++ V+P T LSAC + S GK I E
Sbjct: 452 ISWNAIIAGYARREDRGEAMKLYKQMQSEGVKPGRVTFLHLLSACTNSSAYSDGKMIHED 511
Query: 358 IVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQA 417
I+ +G++SN + +L++M+ +CG I +A+ VFE +D+ W++MI G+A HG + A
Sbjct: 512 ILRSGIKSNGHLANALMNMYRRCGSIMEAQNVFEGTRARDIISWNSMIAGHAQHGSYEAA 571
Query: 418 LNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLV 477
LF +M+ EGL+PD + + S+L C + ++ G + + G++ + L+
Sbjct: 572 YKLFLEMKK-EGLEPDKITFASVLVGCKNPEALELGRQIHMLIIES-GLQLDVNLGNALI 629
Query: 478 DLLGRAGRFDLALKTIHEM 496
++ R G A + H +
Sbjct: 630 NMYIRCGSLQDAYEVFHSL 648
Score = 233 bits (595), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 135/457 (29%), Positives = 236/457 (51%), Gaps = 10/457 (2%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
++R+ + GS E LS T N + +++ C S+ + KR+H+ +++ G
Sbjct: 55 VMRDEQHRGSEREDLSNAYQPRPTET--NRAAYVDLVQNCTRKRSLAEAKRIHAQMVEAG 112
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
D F+ LI+MY KC + +V +MP R V+SWNS+IS +++ +A +
Sbjct: 113 VGPDIFLSNLLINMYVKCRSVSDAHQVFLKMP--RRDVISWNSLISCYAQQGFKKKAFQL 170
Query: 121 LKEMWVLGLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
+EM G S T++S+++ C G +H + + G + + NS+++MY
Sbjct: 171 FEEMQTAGFIPSKITYISILTACCSPAELEYGKKIHSKIIEAG-YQRDPRVQNSLLNMYG 229
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K + AR +F I +VS+ T++G Y V E GL QM + PD V ++N
Sbjct: 230 KCEDLPSARQVFSGIYRRDVVSYNTMLGLYAQKAYVEECIGLFGQMSSEGIPPDKVTYIN 289
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
L+ L +H L + G N++ + L +M+ +CGD+ A++ +A ++
Sbjct: 290 LLDAFTTPSMLDEGKRIHKLAVNEGLNSDIRVGTALATMFVRCGDVAGAKQALEAFADRD 349
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEE 356
V ++ ++I AQ G+ EA + ++ V N T + L+AC+ +L G+ I
Sbjct: 350 VVVYNALIAALAQHGHYEEAFEQYYQMRSDGVVMNRTTYLSVLNACSTSKALGAGELIHS 409
Query: 357 YIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQ 416
+I G S+ Q+ SLI M+++CG + +A+E+F +P +DL W+A+I GYA +
Sbjct: 410 HISEVGHSSDVQIGNSLISMYARCGDLPRARELFNTMPKRDLISWNAIIAGYARREDRGE 469
Query: 417 ALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDG 453
A+ L+ +MQ EG+KP V + +LSAC++S DG
Sbjct: 470 AMKLYKQMQS-EGVKPGRVTFLHLLSACTNSSAYSDG 505
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 104/372 (27%), Positives = 191/372 (51%), Gaps = 7/372 (1%)
Query: 130 ELSASTFVSVVSGCSFRQGIS----MHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEAR 185
E + + +V +V C+ ++ ++ +H + + G+ +I L+N +++MY K V++A
Sbjct: 79 ETNRAAYVDLVQNCTRKRSLAEAKRIHAQMVEAGV-GPDIFLSNLLINMYVKCRSVSDAH 137
Query: 186 SIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVG 245
+F ++ ++SW ++I Y G +AF L +M+ P + +++++ C
Sbjct: 138 QVFLKMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQTAGFIPSKITYISILTACCSPA 197
Query: 246 NLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIG 305
L +HS ++++GY + + N L++MY KC DL AR+VF + + V + +M+G
Sbjct: 198 ELEYGKKIHSKIIEAGYQRDPRVQNSLLNMYGKCEDLPSARQVFSGIYRRDVVSYNTMLG 257
Query: 306 GYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLES 365
YAQ Y E + LF ++ + P++ T L A L +GK I + V GL S
Sbjct: 258 LYAQKAYVEECIGLFGQMSSEGIPPDKVTYINLLDAFTTPSMLDEGKRIHKLAVNEGLNS 317
Query: 366 NRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQ 425
+ +V T+L MF +CG + AK+ E D+D+ V++A+I A HG ++A +Y+M+
Sbjct: 318 DIRVGTALATMFVRCGDVAGAKQALEAFADRDVVVYNALIAALAQHGHYEEAFEQYYQMR 377
Query: 426 HVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGR 485
+G+ + Y S+L+ACS S + G S S G ++ L+ + R G
Sbjct: 378 S-DGVVMNRTTYLSVLNACSTSKALGAG-ELIHSHISEVGHSSDVQIGNSLISMYARCGD 435
Query: 486 FDLALKTIHEMP 497
A + + MP
Sbjct: 436 LPRARELFNTMP 447
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 83/302 (27%), Positives = 151/302 (50%), Gaps = 3/302 (0%)
Query: 218 LCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYT 277
L N + + +++L+ C + +L A +H+ ++++G + L NLL++MY
Sbjct: 69 LSNAYQPRPTETNRAAYVDLVQNCTRKRSLAEAKRIHAQMVEAGVGPDIFLSNLLINMYV 128
Query: 278 KCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLAT 337
KC + A +VF + + V W S+I YAQ G+ +A LF+ + P++ T +
Sbjct: 129 KCRSVSDAHQVFLKMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQTAGFIPSKITYIS 188
Query: 338 TLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKD 397
L+AC L GK+I I+ G + + +VQ SL++M+ KC + A++VF + +D
Sbjct: 189 ILTACCSPAELEYGKKIHSKIIEAGYQRDPRVQNSLLNMYGKCEDLPSARQVFSGIYRRD 248
Query: 398 LAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFF 457
+ ++ M+ YA ++ + LF +M EG+ PD V Y ++L A + M+D+G
Sbjct: 249 VVSYNTMLGLYAQKAYVEECIGLFGQMSS-EGIPPDKVTYINLLDAFTTPSMLDEGKRIH 307
Query: 458 KSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHN 517
K + N G+ I L + R G A + + E + V+ L++A +H +
Sbjct: 308 K-LAVNEGLNSDIRVGTALATMFVRCGDVAGAKQAL-EAFADRDVVVYNALIAALAQHGH 365
Query: 518 VE 519
E
Sbjct: 366 YE 367
>gi|18483237|gb|AAL73981.1|AF466201_10 putative vegetative storage protein [Sorghum bicolor]
Length = 779
Score = 413 bits (1061), Expect = e-112, Method: Compositional matrix adjust.
Identities = 226/637 (35%), Positives = 359/637 (56%), Gaps = 27/637 (4%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+IR + G F + Y SML V N +TFP VLKAC+ + + G+ +H+H VG
Sbjct: 70 LIRAYSWRGPFHAAIDLYRSMLYFRVPPNKYTFPFVLKACSALADLCAGRTIHAHAAAVG 129
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
D FV T LID+Y +C+ F + V +MP +R VV+WN++++ ++ + AI
Sbjct: 130 LHTDLFVSTALIDLYIRCARFGPAANVFAKMP--MRDVVAWNAMLAGYANHGMYHHAIAH 187
Query: 121 LKEMWVLG-LELSASTFVSVVS-----GCSFRQGISMHCCVYKLGLLNNE--IPLANSVM 172
L +M G L +AST VS++ G F QG S+H + L NE + + +++
Sbjct: 188 LLDMQDRGGLRPNASTLVSLLPLLAQHGALF-QGTSVHAYCLRAYLDQNEEQVLIGTALL 246
Query: 173 SMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQM--------RR 224
MYAK + A +F + + V+W+ +IGG+V + EAF L M
Sbjct: 247 DMYAKCKHLVYACRVFHGMTVRNEVTWSALIGGFVLCDRMTEAFNLFKDMLVEGMCFLSA 306
Query: 225 MSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLEL 284
SV L V CA + +L + +H+LL KSG + + N L+SMY K G +
Sbjct: 307 TSVASALRV-------CASLADLRMGTQLHALLAKSGIHADLTAGNSLLSMYAKAGLINE 359
Query: 285 ARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAE 344
A +FD + K + +++ GY Q G EA +FK++ +V+P+ AT+ + + AC+
Sbjct: 360 ATMLFDEIAIKDTISYGALLSGYVQNGKAEEAFLVFKKMQACNVQPDIATMVSLIPACSH 419
Query: 345 LGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAM 404
L +L G+ +++ GL + SLI M++KCGRI+ +++VF+++P +D+ W+ M
Sbjct: 420 LAALQHGRCSHGSVIIRGLALETSICNSLIDMYAKCGRIDLSRQVFDKMPARDIVSWNTM 479
Query: 405 INGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNF 464
I GY IHG+G +A LF M++ +G +PD V + +++ACSHSG+V +G +F +M +
Sbjct: 480 IAGYGIHGLGKEATTLFLSMKN-QGFEPDDVTFICLIAACSHSGLVTEGKHWFDTMTHKY 538
Query: 465 GIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYA 524
GI P +EHY+C+VDLL R G D A + I MP++ +VW LL AC H N++LG+
Sbjct: 539 GILPRMEHYICMVDLLARGGFLDEAYQFIQSMPLKADVRVWGALLGACRIHKNIDLGKQV 598
Query: 525 AKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQV 584
++ + L P TGN++L++N+F++AG + EAA R + + K PG S +EI+GS+
Sbjct: 599 SRMIQKLGPEGTGNFVLLSNIFSAAGRFDEAAEVRIIQKVKGFKKSPGCSWIEINGSLHA 658
Query: 585 FVAGDRSHHLSVDIRKTLKELHIKLLEAGYIAEADIV 621
FV GD+SH S DI L + I + + GY A+ V
Sbjct: 659 FVGGDQSHPCSPDIYHELDNILIDIKKLGYQADTSFV 695
Score = 115 bits (288), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 69/233 (29%), Positives = 113/233 (48%), Gaps = 5/233 (2%)
Query: 280 GDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTL 339
G L LAR+VFD + + ++I Y+ G A++L++ +L V PN+ T L
Sbjct: 47 GQLALARQVFDRIPAPDARAYNALIRAYSWRGPFHAAIDLYRSMLYFRVPPNKYTFPFVL 106
Query: 340 SACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLA 399
AC+ L L G+ I + GL ++ V T+LI ++ +C R A VF ++P +D+
Sbjct: 107 KACSALADLCAGRTIHAHAAAVGLHTDLFVSTALIDLYIRCARFGPAANVFAKMPMRDVV 166
Query: 400 VWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKS 459
W+AM+ GYA HGM A+ MQ GL+P+A S+L + G + G S
Sbjct: 167 AWNAMLAGYANHGMYHHAIAHLLDMQDRGGLRPNASTLVSLLPLLAQHGALFQGTSVHAY 226
Query: 460 MQSNFGIEPSIEHYL---CLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLL 509
+ ++ + E L L+D+ + A + H M V + W+ L+
Sbjct: 227 CLRAY-LDQNEEQVLIGTALLDMYAKCKHLVYACRVFHGMTVRNEV-TWSALI 277
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 121/256 (47%), Gaps = 5/256 (1%)
Query: 179 GKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLI 238
G++ AR +FD I ++ +I Y G + A L M V P+ F ++
Sbjct: 47 GQLALARQVFDRIPAPDARAYNALIRAYSWRGPFHAAIDLYRSMLYFRVPPNKYTFPFVL 106
Query: 239 LGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVF 298
C+ + +L ++H+ G + + + L+ +Y +C A VF + + V
Sbjct: 107 KACSALADLCAGRTIHAHAAAVGLHTDLFVSTALIDLYIRCARFGPAANVFAKMPMRDVV 166
Query: 299 LWTSMIGGYAQLGYPSEAV-NLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEY 357
W +M+ GYA G A+ +L + +RPN +TL + L A+ G+L +G + Y
Sbjct: 167 AWNAMLAGYANHGMYHHAIAHLLDMQDRGGLRPNASTLVSLLPLLAQHGALFQGTSVHAY 226
Query: 358 IVLNGLESNRQ---VQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMG 414
+ L+ N + + T+L+ M++KC + A VF + ++ WSA+I G+ +
Sbjct: 227 CLRAYLDQNEEQVLIGTALLDMYAKCKHLVYACRVFHGMTVRNEVTWSALIGGFVLCDRM 286
Query: 415 DQALNLFYKMQHVEGL 430
+A NLF M VEG+
Sbjct: 287 TEAFNLFKDML-VEGM 301
>gi|297807711|ref|XP_002871739.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297317576|gb|EFH47998.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 850
Score = 412 bits (1060), Expect = e-112, Method: Compositional matrix adjust.
Identities = 236/670 (35%), Positives = 359/670 (53%), Gaps = 58/670 (8%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+IR+ NNG + LS++ M +++TFP V KAC I+S+ G H+ G
Sbjct: 98 LIRSYGNNGRANKCLSSFCLMHSLSWTPDNYTFPFVFKACGEISSVRCGDSSHALSRVTG 157
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F + FV L+ MYS+C +RKV DEMPV VVSWNSII ++++ A+ +
Sbjct: 158 FMSNVFVGNALVAMYSRCGSLSDARKVFDEMPVW--DVVSWNSIIESYAKLGKPKMALEM 215
Query: 121 LKEMW-VLGLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMY 175
+M G T V+V+ C + G H ++ N + N ++ MY
Sbjct: 216 FSKMTNEFGFRPDDITLVNVLPPCASVGTRSLGKQFHGFAVTSEMIQNMF-VGNCLVDMY 274
Query: 176 AKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVN---------------------- 213
AKFG ++EA ++F + +VSW ++ GY +G
Sbjct: 275 AKFGMMDEANTVFSNMPVKDVVSWNAMVAGYSQIGRFEDAVRLFEQMQEEKIKMDVVTWS 334
Query: 214 -------------EAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSL---- 256
EA G+C QM + P+ V ++++ GCA VG L +H
Sbjct: 335 AAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKY 394
Query: 257 ---LLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAV--LEKSVFLWTSMIGGYAQLG 311
L K+G+ +E+ + N L+ MY KC +++AR +FD++ E+ V WT MIGGY+Q G
Sbjct: 395 PMDLRKNGHGDENMVINQLIDMYAKCKKVDIARAMFDSLSPKERDVVTWTVMIGGYSQHG 454
Query: 312 YPSEAVNLFKRLLK--TSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLES-NRQ 368
++A+ L + + RPN T++ L ACA L +LS GK+I Y + N +
Sbjct: 455 DANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALSIGKQIHAYALRNQQNAVPLF 514
Query: 369 VQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVE 428
V LI M++KCG I A+ VF+ + +K+ W++++ GY +HG G++AL +F +M+ +
Sbjct: 515 VSNCLIDMYAKCGDIGDARLVFDNMMEKNEVTWTSLMTGYGMHGYGEEALGIFEEMRRI- 573
Query: 429 GLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDL 488
G K D V +L ACSHSGM+D G+ +F M+++FG+ P EHY CLVDLLGRAGR +
Sbjct: 574 GFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTDFGVSPGPEHYACLVDLLGRAGRLNA 633
Query: 489 ALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTS 548
AL+ I EMP+E VW LLS C H VELGEYAAK + L + G+Y L++N++ +
Sbjct: 634 ALRLIEEMPMEPPPVVWVALLSCCRIHGKVELGEYAAKKITELASNNDGSYTLLSNMYAN 693
Query: 549 AGMWKEAATARGLMDDRRLTKEPGWSQVE-IDGSVQVFVAGDRSHHLSVDIRKTLKELHI 607
AG WK+ R LM + + K PG S VE I G+ FV GD++H + +I + L +
Sbjct: 694 AGRWKDVTRIRSLMRHKGIKKRPGCSWVEGIKGTTTFFV-GDKTHPHAKEIYQVLSDHMQ 752
Query: 608 KLLEAGYIAE 617
++ + GY+ E
Sbjct: 753 RIKDIGYVPE 762
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 136/532 (25%), Positives = 226/532 (42%), Gaps = 56/532 (10%)
Query: 34 PLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPV 93
P + C I+ + K +H +L G + + LI Y + +L P
Sbjct: 32 PPFIHKCKTISQV---KLIHQKLLSFGILT-LNLTSHLISTYISLGCLSHAVSLLRRFPP 87
Query: 94 RLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGC----SFRQGI 149
V WNS+I ++ ++ + M L TF V C S R G
Sbjct: 88 SDAGVYHWNSLIRSYGNNGRANKCLSSFCLMHSLSWTPDNYTFPFVFKACGEISSVRCGD 147
Query: 150 SMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNV 209
S H G ++N + + N++++MY++ G +++AR +FDE+ +VSW +II Y +
Sbjct: 148 SSHALSRVTGFMSN-VFVGNALVAMYSRCGSLSDARKVFDEMPVWDVVSWNSIIESYAKL 206
Query: 210 GNVNEAFGLCNQM-RRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPL 268
G A + ++M PD + +N++ CA VG L H + S +
Sbjct: 207 GKPKMALEMFSKMTNEFGFRPDDITLVNVLPPCASVGTRSLGKQFHGFAVTSEMIQNMFV 266
Query: 269 DNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLF-------- 320
N LV MY K G ++ A VF + K V W +M+ GY+Q+G +AV LF
Sbjct: 267 GNCLVDMYAKFGMMDEANTVFSNMPVKDVVSWNAMVAGYSQIGRFEDAVRLFEQMQEEKI 326
Query: 321 ---------------------------KRLLKTSVRPNEATLATTLSACAELGSLSKGKE 353
+++L + ++PNE TL + LS CA +G+L GKE
Sbjct: 327 KMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKE 386
Query: 354 IEEYIV-------LNGLESNRQVQTSLIHMFSKCGRINKAKEVFERV--PDKDLAVWSAM 404
I Y + NG V LI M++KC +++ A+ +F+ + ++D+ W+ M
Sbjct: 387 IHCYAIKYPMDLRKNGHGDENMVINQLIDMYAKCKKVDIARAMFDSLSPKERDVVTWTVM 446
Query: 405 INGYAIHGMGDQALNLFYKMQHVE-GLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSN 463
I GY+ HG ++AL L +M + +P+A + L AC+ + G N
Sbjct: 447 IGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALSIGKQIHAYALRN 506
Query: 464 FGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKH 515
+ CL+D+ + G A M +E W L++ H
Sbjct: 507 QQNAVPLFVSNCLIDMYAKCGDIGDARLVFDNM-MEKNEVTWTSLMTGYGMH 557
>gi|357479991|ref|XP_003610281.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355511336|gb|AES92478.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 783
Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust.
Identities = 222/627 (35%), Positives = 363/627 (57%), Gaps = 14/627 (2%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQ-TGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKV 59
++R + N S ++S Y+ + + T + ++FT+ + AC+N + +H+H +
Sbjct: 81 LVRGFSLNDSPSSSISLYTHLRRNTNLSPDNFTYAFAVAACSNDKHLM---LLHAHSIID 137
Query: 60 GFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAIL 119
G+ + FV + L+D+Y K S V +RKV D MP R V WN++I+ + C D++I
Sbjct: 138 GYGSNVFVGSALVDLYCKFSRVVYARKVFDGMPER--DTVLWNTMINGLVKNCCFDDSIQ 195
Query: 120 VLKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMY 175
+ +EM G+ + +ST +V+ + + G+ + C K+G + L ++S+Y
Sbjct: 196 LFREMVADGVRVDSSTVTAVLPAAAELQELKVGMGIQCLALKIGFGFCDYVLT-GLISLY 254
Query: 176 AKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFL 235
+K G VN AR +F I ++++ +I G+ G + L ++ +
Sbjct: 255 SKCGDVNTARLLFRRINRPDLIAYNAMISGFTANGGTECSVKLFRELLFSGERVSSSTIV 314
Query: 236 NLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEK 295
LI + G+L LA S+H +KSG + ++Y K +++LAR +FD EK
Sbjct: 315 GLIPLHSPFGHLHLACSIHGFCVKSGIILNPTVSTAFTAIYNKLNEIDLARHLFDESPEK 374
Query: 296 SVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIE 355
+V W +MI GY Q G A++LFK ++KT PN T+ T LSACA+LGSLS GK +
Sbjct: 375 TVVAWNAMISGYTQNGSTETAISLFKEMMKTEFTPNAVTITTILSACAQLGSLSFGKWVH 434
Query: 356 EYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGD 415
I LE N V T+L+ M++KCG I++A ++F+ + +K+ W+ MI GY +HG G
Sbjct: 435 HLIKSENLEPNIYVSTALVDMYAKCGNISEAWQLFDSMSEKNTVTWNTMIFGYGLHGYGH 494
Query: 416 QALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLC 475
+AL L+ +M H+ G P AV + S+L ACSH+G+V +G F +M + + IEP IEHY C
Sbjct: 495 EALKLYNEMLHL-GYNPSAVTFLSVLYACSHAGLVGEGEEIFHNMVNKYRIEPLIEHYAC 553
Query: 476 LVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGS 535
+VD+LGR+G+ + AL+ I +MPVE VW LL ACM H + ++ A++ L L+PGS
Sbjct: 554 MVDILGRSGQLEKALEFIKKMPVEPGPAVWGTLLGACMIHKDTDIARLASERLFELDPGS 613
Query: 536 TGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLS 595
G Y+L++N+++ + +AA+ R ++ R+L K PG + +E++G+ VFV+GDRSH +
Sbjct: 614 VGYYVLLSNIYSVERNFPKAASIRQVVKKRKLAKSPGCTLIEVNGTPHVFVSGDRSHSHA 673
Query: 596 VDIRKTLKELHIKLLEAGYIAEADIVP 622
DI L++L K+ E GY +A+ VP
Sbjct: 674 TDIYAKLEKLTGKMREMGY--QAETVP 698
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 94/162 (58%), Gaps = 5/162 (3%)
Query: 285 ARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLK-TSVRPNEATLATTLSACA 343
AR +F +V + +FL+ ++ G++ PS +++L+ L + T++ P+ T A ++AC+
Sbjct: 63 ARALFFSVPKPDIFLFNVLVRGFSLNDSPSSSISLYTHLRRNTNLSPDNFTYAFAVAACS 122
Query: 344 ELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSA 403
L + + +++G SN V ++L+ ++ K R+ A++VF+ +P++D +W+
Sbjct: 123 NDKHLML---LHAHSIIDGYGSNVFVGSALVDLYCKFSRVVYARKVFDGMPERDTVLWNT 179
Query: 404 MINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACS 445
MING + D ++ LF +M +G++ D+ T++L A +
Sbjct: 180 MINGLVKNCCFDDSIQLFREMV-ADGVRVDSSTVTAVLPAAA 220
Score = 46.2 bits (108), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 35/160 (21%), Positives = 68/160 (42%), Gaps = 9/160 (5%)
Query: 358 IVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQA 417
+LNG + T L A+ +F VP D+ +++ ++ G++++ +
Sbjct: 35 FILNGYRFDLATLTKLTQKLFDFSATRHARALFFSVPKPDIFLFNVLVRGFSLNDSPSSS 94
Query: 418 LNLFYKMQHVEGLKPDAVVYTSILSACSHSG--MVDDGLSFFKSMQSNFGIEPSIEHYLC 475
++L+ ++ L PD Y ++ACS+ M+ S SN + +
Sbjct: 95 ISLYTHLRRNTNLSPDNFTYAFAVAACSNDKHLMLLHAHSIIDGYGSNVFVGSA------ 148
Query: 476 LVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKH 515
LVDL + R A K MP E +W +++ +K+
Sbjct: 149 LVDLYCKFSRVVYARKVFDGMP-ERDTVLWNTMINGLVKN 187
>gi|225430696|ref|XP_002266026.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g47840 [Vitis vinifera]
Length = 713
Score = 411 bits (1057), Expect = e-112, Method: Compositional matrix adjust.
Identities = 223/627 (35%), Positives = 339/627 (54%), Gaps = 9/627 (1%)
Query: 1 MIRNSTNNGSFEETLSTYSSM-LQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKV 59
+I N E L + +M +++G+ + F L KAC + + G+ +H + +K
Sbjct: 86 LISGYVNANDSSEALLLFKNMRVESGLRIDPFILSLAHKACGLNSDVNYGELLHGYAVKT 145
Query: 60 GFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAIL 119
G FV + L+DMY+K R+V EMP +R+VVSW +II+ RA N EA++
Sbjct: 146 GLVNSVFVGSALLDMYTKNGKIFEGRRVFHEMP--MRNVVSWTAIITGLVRAGYNKEALV 203
Query: 120 VLKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMY 175
EMW +E + TF + C+ G +H K G + +AN++ +MY
Sbjct: 204 YFSEMWRSRVEYDSYTFAIALKACADSGALNYGREIHAQAMKKGFDVSSF-VANTLATMY 262
Query: 176 AKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFL 235
K GK+ ++F+++ +VSWTTII V +G A +MR V+P+ F
Sbjct: 263 NKCGKLEYGLTLFEKMSMRDVVSWTTIITTLVQMGQEECAVQAFIRMRESDVSPNEYTFA 322
Query: 236 NLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEK 295
+I GCA + + +H+L+L G ++N +++MY KCG L + +F + +
Sbjct: 323 AVISGCANLARIEWGEQLHALILHLGLAASLSVENSIMTMYAKCGQLTSSSVIFHEMTRR 382
Query: 296 SVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIE 355
+ W+++I GY+Q G+ SEA L + +P E LA+ LSAC + L GK++
Sbjct: 383 DIVSWSTIIAGYSQGGHVSEAFELLSWMRMEGPKPTEFALASVLSACGNMAILEHGKQLH 442
Query: 356 EYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGD 415
Y++ GLE V ++LI+M+ KCG I +A +F+ + D+ W+AMINGYA HG
Sbjct: 443 AYVLSIGLEHTAMVLSALINMYCKCGSIEEASRIFDAAENDDIVSWTAMINGYAEHGYSR 502
Query: 416 QALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLC 475
+ ++LF K+ V GL+PD+V + +LSACSH+G+VD G +F +M + I PS EHY C
Sbjct: 503 EVIDLFEKIPRV-GLRPDSVTFIGVLSACSHAGLVDLGFRYFNAMSKKYQISPSKEHYGC 561
Query: 476 LVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGS 535
++DLL RAGR A I MP VW+ LL AC H +VE G A+ +L L P
Sbjct: 562 MIDLLCRAGRLSDAEHMIEAMPFHRDDVVWSTLLRACRVHGDVERGRRTAERILQLEPNC 621
Query: 536 TGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLS 595
G +I +AN++ S G W+EAA R LM + + KEPGWS +++ V FVAGDRSH
Sbjct: 622 AGTHITLANIYASKGKWREAADIRKLMKSKGVIKEPGWSWIKVKDLVFAFVAGDRSHPQG 681
Query: 596 VDIRKTLKELHIKLLEAGYIAEADIVP 622
DI L L + A + E +P
Sbjct: 682 EDIYNMLDLLASRTELADCVQETGFLP 708
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 121/412 (29%), Positives = 209/412 (50%), Gaps = 10/412 (2%)
Query: 83 SSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWV-LGLELSASTFVSVVS 141
++R++ D+M + +SW ++IS + A + EA+L+ K M V GL +
Sbjct: 67 NARRMFDKMSQK--DEISWTTLISGYVNANDSSEALLLFKNMRVESGLRIDPFILSLAHK 124
Query: 142 GCSFRQGIS----MHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIV 197
C ++ +H K GL+N+ + + ++++ MY K GK+ E R +F E+ ++V
Sbjct: 125 ACGLNSDVNYGELLHGYAVKTGLVNS-VFVGSALLDMYTKNGKIFEGRRVFHEMPMRNVV 183
Query: 198 SWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLL 257
SWT II G V G EA ++M R V D F + CA G L +H+
Sbjct: 184 SWTAIITGLVRAGYNKEALVYFSEMWRSRVEYDSYTFAIALKACADSGALNYGREIHAQA 243
Query: 258 LKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAV 317
+K G++ + N L +MY KCG LE +F+ + + V WT++I Q+G AV
Sbjct: 244 MKKGFDVSSFVANTLATMYNKCGKLEYGLTLFEKMSMRDVVSWTTIITTLVQMGQEECAV 303
Query: 318 NLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMF 377
F R+ ++ V PNE T A +S CA L + G+++ I+ GL ++ V+ S++ M+
Sbjct: 304 QAFIRMRESDVSPNEYTFAAVISGCANLARIEWGEQLHALILHLGLAASLSVENSIMTMY 363
Query: 378 SKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVY 437
+KCG++ + +F + +D+ WS +I GY+ G +A L M+ +EG KP
Sbjct: 364 AKCGQLTSSSVIFHEMTRRDIVSWSTIIAGYSQGGHVSEAFELLSWMR-MEGPKPTEFAL 422
Query: 438 TSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLA 489
S+LSAC + +++ G + S G+E + L+++ + G + A
Sbjct: 423 ASVLSACGNMAILEHGKQLHAYVLS-IGLEHTAMVLSALINMYCKCGSIEEA 473
Score = 143 bits (361), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 87/336 (25%), Positives = 167/336 (49%), Gaps = 3/336 (0%)
Query: 162 NNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQ 221
++P +N + K G + AR +FD++ + +SWTT+I GYVN + +EA L
Sbjct: 46 QTDLPESNKQLKELVKTGHLGNARRMFDKMSQKDEISWTTLISGYVNANDSSEALLLFKN 105
Query: 222 MRRMS-VTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCG 280
MR S + D + C ++ +H +K+G N + + L+ MYTK G
Sbjct: 106 MRVESGLRIDPFILSLAHKACGLNSDVNYGELLHGYAVKTGLVNSVFVGSALLDMYTKNG 165
Query: 281 DLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLS 340
+ RRVF + ++V WT++I G + GY EA+ F + ++ V + T A L
Sbjct: 166 KIFEGRRVFHEMPMRNVVSWTAIITGLVRAGYNKEALVYFSEMWRSRVEYDSYTFAIALK 225
Query: 341 ACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAV 400
ACA+ G+L+ G+EI + G + + V +L M++KCG++ +FE++ +D+
Sbjct: 226 ACADSGALNYGREIHAQAMKKGFDVSSFVANTLATMYNKCGKLEYGLTLFEKMSMRDVVS 285
Query: 401 WSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSM 460
W+ +I G + A+ F +M+ + + P+ + +++S C++ ++ G ++
Sbjct: 286 WTTIITTLVQMGQEECAVQAFIRMRESD-VSPNEYTFAAVISGCANLARIEWGEQ-LHAL 343
Query: 461 QSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEM 496
+ G+ S+ ++ + + G+ + HEM
Sbjct: 344 ILHLGLAASLSVENSIMTMYAKCGQLTSSSVIFHEM 379
>gi|168023826|ref|XP_001764438.1| predicted protein [Physcomitrella patens subsp. patens]
gi|54695178|dbj|BAD67154.1| PpPPR_91 [Physcomitrella patens]
gi|162684302|gb|EDQ70705.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 868
Score = 411 bits (1057), Expect = e-112, Method: Compositional matrix adjust.
Identities = 230/661 (34%), Positives = 354/661 (53%), Gaps = 44/661 (6%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI N + T+ M + N TF +LKAC N + + G+++H+ V +G
Sbjct: 128 MIAAYAGNNHPAKAFDTFERMTDANIEPNRITFLSILKACNNYSILEKGRKIHTIVKAMG 187
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+ D V T LI MYSKC + + +V +M R+VVSW +II A+++ +EA +
Sbjct: 188 METDVAVATALITMYSKCGEISVACEVFHKMTE--RNVVSWTAIIQANAQHRKLNEAFEL 245
Query: 121 LKEMWVLGLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
++M G+ +A TFVS+++ C + +G +H + + GL + I +AN++++MY
Sbjct: 246 YEQMLQAGISPNAVTFVSLLNSCNTPEALNRGRRIHSHISERGLETDMI-VANALITMYC 304
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVG-----NVNEAFGLCNQMRRMSVTPDL 231
K V EAR IFD + + ++SW+ +I GY G +++E F L +MRR V P+
Sbjct: 305 KCNSVQEAREIFDRMSKRDVISWSAMIAGYAQSGYKDKESIDEVFQLLERMRREGVFPNK 364
Query: 232 VVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDA 291
V F++++ C G L +H+ L K G+ + L + +MY KCG + A +VF
Sbjct: 365 VTFMSILRACTAHGALEQGRQIHAELSKVGFELDRSLQTAIFNMYAKCGSIYEAEQVFSK 424
Query: 292 VLEKSVFLWTS-------------------------------MIGGYAQLGYPSEAVNLF 320
+ K+V WTS MI GYAQ G + L
Sbjct: 425 MANKNVVAWTSFLSMYIKCGDLSSAEKVFSEMPTRNVVSWNLMIAGYAQNGDIVKVFELL 484
Query: 321 KRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKC 380
+ +P+ T+ T L AC L L +GK + V GLES+ V TSLI M+SKC
Sbjct: 485 SSMKAEGFQPDRVTVITILEACGALAGLERGKLVHAEAVKLGLESDTVVATSLIGMYSKC 544
Query: 381 GRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSI 440
G++ +A+ VF+++ ++D W+AM+ GY HG G +A++LF +M E + P+ + T++
Sbjct: 545 GQVAEARTVFDKMSNRDTVAWNAMLAGYGQHGDGLEAVDLFKRMLK-ERVSPNEITLTAV 603
Query: 441 LSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEV 500
+SACS +G+V +G F+ MQ +F + P +HY C+VDLLGRAGR A + I MP E
Sbjct: 604 ISACSRAGLVQEGREIFRMMQEDFKMTPRKQHYGCMVDLLGRAGRLQEAEEFIQSMPCEP 663
Query: 501 QAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARG 560
VW LL AC H+NV+L E AA ++L L P YI ++N++ AG W ++ R
Sbjct: 664 DISVWHALLGACKSHNNVQLAERAAHHILELEPSYASVYITLSNIYAQAGRWDDSTKVRR 723
Query: 561 LMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKELHIKLLEAGYIAEADI 620
+MDDR L K+ G S +EIDG + FVA D +H I L+ L ++ EAGY +
Sbjct: 724 VMDDRGLKKDRGESSIEIDGRIHTFVAEDCAHPEIDAIHAELETLTKEMKEAGYTPDMRF 783
Query: 621 V 621
V
Sbjct: 784 V 784
Score = 240 bits (612), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 151/547 (27%), Positives = 269/547 (49%), Gaps = 46/547 (8%)
Query: 9 GSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQ 68
G E + + Q G+ NS T+ V++ CA DGK VH + ++G + D ++
Sbjct: 35 GRLREAIQLLGIIKQRGLLVNSNTYGCVIEHCAKARRFEDGKMVHKQLDELGVEIDIYLG 94
Query: 69 TGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLG 128
LI+ YSK D S+ +V M LR VV+W+S+I+A++ +A + M
Sbjct: 95 NSLINFYSKFEDVASAEQVFRRMT--LRDVVTWSSMIAAYAGNNHPAKAFDTFERMTDAN 152
Query: 129 LELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEA 184
+E + TF+S++ C+ +G +H V +G + ++ +A ++++MY+K G+++ A
Sbjct: 153 IEPNRITFLSILKACNNYSILEKGRKIHTIVKAMG-METDVAVATALITMYSKCGEISVA 211
Query: 185 RSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQV 244
+F ++ E ++VSWT II +NEAF L QM + ++P+ V F++L+ C
Sbjct: 212 CEVFHKMTERNVVSWTAIIQANAQHRKLNEAFELYEQMLQAGISPNAVTFVSLLNSCNTP 271
Query: 245 GNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMI 304
L +HS + + G + + N L++MY KC ++ AR +FD + ++ V W++MI
Sbjct: 272 EALNRGRRIHSHISERGLETDMIVANALITMYCKCNSVQEAREIFDRMSKRDVISWSAMI 331
Query: 305 GGYAQLGYP-----SEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIV 359
GYAQ GY E L +R+ + V PN+ T + L AC G+L +G++I +
Sbjct: 332 AGYAQSGYKDKESIDEVFQLLERMRREGVFPNKVTFMSILRACTAHGALEQGRQIHAELS 391
Query: 360 LNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSA---------------- 403
G E +R +QT++ +M++KCG I +A++VF ++ +K++ W++
Sbjct: 392 KVGFELDRSLQTAIFNMYAKCGSIYEAEQVFSKMANKNVVAWTSFLSMYIKCGDLSSAEK 451
Query: 404 ---------------MINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSG 448
MI GYA +G + L M+ EG +PD V +IL AC
Sbjct: 452 VFSEMPTRNVVSWNLMIAGYAQNGDIVKVFELLSSMK-AEGFQPDRVTVITILEACGALA 510
Query: 449 MVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPL 508
++ G + G+E L+ + + G+ A +T+ + W +
Sbjct: 511 GLERG-KLVHAEAVKLGLESDTVVATSLIGMYSKCGQVAEA-RTVFDKMSNRDTVAWNAM 568
Query: 509 LSACMKH 515
L+ +H
Sbjct: 569 LAGYGQH 575
Score = 189 bits (480), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 117/426 (27%), Positives = 217/426 (50%), Gaps = 13/426 (3%)
Query: 116 EAILVLKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSV 171
EAI +L + GL ++++T+ V+ C+ F G +H + +LG+ +I L NS+
Sbjct: 39 EAIQLLGIIKQRGLLVNSNTYGCVIEHCAKARRFEDGKMVHKQLDELGV-EIDIYLGNSL 97
Query: 172 MSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDL 231
++ Y+KF V A +F + +V+W+++I Y + +AF +M ++ P+
Sbjct: 98 INFYSKFEDVASAEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMTDANIEPNR 157
Query: 232 VVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDA 291
+ FL+++ C L +H+++ G + + L++MY+KCG++ +A VF
Sbjct: 158 ITFLSILKACNNYSILEKGRKIHTIVKAMGMETDVAVATALITMYSKCGEISVACEVFHK 217
Query: 292 VLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKG 351
+ E++V WT++I AQ +EA L++++L+ + PN T + L++C +L++G
Sbjct: 218 MTERNVVSWTAIIQANAQHRKLNEAFELYEQMLQAGISPNAVTFVSLLNSCNTPEALNRG 277
Query: 352 KEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIH 411
+ I +I GLE++ V +LI M+ KC + +A+E+F+R+ +D+ WSAMI GYA
Sbjct: 278 RRIHSHISERGLETDMIVANALITMYCKCNSVQEAREIFDRMSKRDVISWSAMIAGYAQS 337
Query: 412 GMG-----DQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGI 466
G D+ L +M+ EG+ P+ V + SIL AC+ G ++ G + S G
Sbjct: 338 GYKDKESIDEVFQLLERMRR-EGVFPNKVTFMSILRACTAHGALEQGRQIHAEL-SKVGF 395
Query: 467 EPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAK 526
E + ++ + G A + +M + W LS +K ++ E
Sbjct: 396 ELDRSLQTAIFNMYAKCGSIYEAEQVFSKMANK-NVVAWTSFLSMYIKCGDLSSAEKVFS 454
Query: 527 NLLTLN 532
+ T N
Sbjct: 455 EMPTRN 460
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 76/258 (29%), Positives = 137/258 (53%), Gaps = 5/258 (1%)
Query: 200 TTIIGGYV----NVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHS 255
T++ GG V G + EA L +++ + + + +I CA+ +H
Sbjct: 21 TSVSGGEVWRLCKAGRLREAIQLLGIIKQRGLLVNSNTYGCVIEHCAKARRFEDGKMVHK 80
Query: 256 LLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSE 315
L + G + L N L++ Y+K D+ A +VF + + V W+SMI YA +P++
Sbjct: 81 QLDELGVEIDIYLGNSLINFYSKFEDVASAEQVFRRMTLRDVVTWSSMIAAYAGNNHPAK 140
Query: 316 AVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIH 375
A + F+R+ ++ PN T + L AC L KG++I + G+E++ V T+LI
Sbjct: 141 AFDTFERMTDANIEPNRITFLSILKACNNYSILEKGRKIHTIVKAMGMETDVAVATALIT 200
Query: 376 MFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAV 435
M+SKCG I+ A EVF ++ ++++ W+A+I A H ++A L+ +M G+ P+AV
Sbjct: 201 MYSKCGEISVACEVFHKMTERNVVSWTAIIQANAQHRKLNEAFELYEQMLQA-GISPNAV 259
Query: 436 VYTSILSACSHSGMVDDG 453
+ S+L++C+ ++ G
Sbjct: 260 TFVSLLNSCNTPEALNRG 277
>gi|147812559|emb|CAN70631.1| hypothetical protein VITISV_020725 [Vitis vinifera]
Length = 713
Score = 410 bits (1055), Expect = e-112, Method: Compositional matrix adjust.
Identities = 223/627 (35%), Positives = 338/627 (53%), Gaps = 9/627 (1%)
Query: 1 MIRNSTNNGSFEETLSTYSSM-LQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKV 59
+I N E L + +M +++G+ + F L KAC + + G+ +H + +K
Sbjct: 86 LISGYVNANDSSEALLLFKNMRVESGLRIDPFILSLAHKACGLNSDVNYGELLHGYAVKT 145
Query: 60 GFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAIL 119
G FV + L+DMY+K R+V EMP +R+VVSW +II+ RA N EA++
Sbjct: 146 GLVNSVFVGSALLDMYTKNGKIFEGRRVFHEMP--MRNVVSWTAIITGLVRAGYNKEALV 203
Query: 120 VLKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMY 175
EMW +E + TF + C+ G +H K G + +AN++ +MY
Sbjct: 204 YFSEMWRSRVEYDSYTFAIALKACADSGALNYGREIHAQAMKKGFDVSSF-VANTLATMY 262
Query: 176 AKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFL 235
K GK+ ++F+++ +VSWTTII V +G A +MR V+P+ F
Sbjct: 263 NKCGKLEYGLTLFEKMSMRDVVSWTTIITTLVQMGQEECAVQAFIRMRESDVSPNEYTFA 322
Query: 236 NLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEK 295
+I GCA + + +H+L+L G ++N +++MY KCG L + +F + +
Sbjct: 323 AVISGCANLARIEWGEQLHALILHLGLAASLSVENSIMTMYAKCGQLTSSSVIFHEMTRR 382
Query: 296 SVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIE 355
+ W+++I GY Q G+ SEA L + +P E LA+ LSAC + L GK++
Sbjct: 383 DIVSWSTIIAGYXQGGHVSEAFELLSWMRMEGPKPTEFALASVLSACGNMAILEHGKQLH 442
Query: 356 EYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGD 415
Y++ GLE V ++LI+M+ KCG I +A +F+ + D+ W+AMINGYA HG
Sbjct: 443 AYVLSIGLEHTAMVLSALINMYCKCGSIEEASRIFDAAENDDIVSWTAMINGYAEHGYSR 502
Query: 416 QALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLC 475
+ ++LF K+ V GL+PD+V + +LSACSH+G+VD G +F +M + I PS EHY C
Sbjct: 503 EVIDLFEKIPRV-GLRPDSVTFIGVLSACSHAGLVDLGFHYFNAMSKKYQISPSKEHYGC 561
Query: 476 LVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGS 535
++DLL RAGR A I MP VW+ LL AC H +VE G A+ +L L P
Sbjct: 562 MIDLLCRAGRLSDAEHMIEAMPFHRDDVVWSTLLRACRVHGDVERGRRTAERILQLEPNC 621
Query: 536 TGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLS 595
G +I +AN++ S G W+EAA R LM + + KEPGWS +++ V FVAGDRSH
Sbjct: 622 AGTHITLANIYASKGKWREAADIRKLMKSKGVIKEPGWSWIKVKDLVFAFVAGDRSHPQG 681
Query: 596 VDIRKTLKELHIKLLEAGYIAEADIVP 622
DI L L + A + E +P
Sbjct: 682 EDIYNMLDLLASRTELADCVQETGFLP 708
Score = 192 bits (489), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 121/412 (29%), Positives = 208/412 (50%), Gaps = 10/412 (2%)
Query: 83 SSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWV-LGLELSASTFVSVVS 141
++R++ D+M + +SW ++IS + A + EA+L+ K M V GL +
Sbjct: 67 NARRMFDKMSQK--DEISWTTLISGYVNANDSSEALLLFKNMRVESGLRIDPFILSLAHK 124
Query: 142 GCSFRQGIS----MHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIV 197
C ++ +H K GL+N+ + + ++++ MY K GK+ E R +F E+ ++V
Sbjct: 125 ACGLNSDVNYGELLHGYAVKTGLVNS-VFVGSALLDMYTKNGKIFEGRRVFHEMPMRNVV 183
Query: 198 SWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLL 257
SWT II G V G EA ++M R V D F + CA G L +H+
Sbjct: 184 SWTAIITGLVRAGYNKEALVYFSEMWRSRVEYDSYTFAIALKACADSGALNYGREIHAQA 243
Query: 258 LKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAV 317
+K G++ + N L +MY KCG LE +F+ + + V WT++I Q+G AV
Sbjct: 244 MKKGFDVSSFVANTLATMYNKCGKLEYGLTLFEKMSMRDVVSWTTIITTLVQMGQEECAV 303
Query: 318 NLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMF 377
F R+ ++ V PNE T A +S CA L + G+++ I+ GL ++ V+ S++ M+
Sbjct: 304 QAFIRMRESDVSPNEYTFAAVISGCANLARIEWGEQLHALILHLGLAASLSVENSIMTMY 363
Query: 378 SKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVY 437
+KCG++ + +F + +D+ WS +I GY G +A L M+ +EG KP
Sbjct: 364 AKCGQLTSSSVIFHEMTRRDIVSWSTIIAGYXQGGHVSEAFELLSWMR-MEGPKPTEFAL 422
Query: 438 TSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLA 489
S+LSAC + +++ G + S G+E + L+++ + G + A
Sbjct: 423 ASVLSACGNMAILEHGKQLHAYVLS-IGLEHTAMVLSALINMYCKCGSIEEA 473
Score = 143 bits (361), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 87/336 (25%), Positives = 167/336 (49%), Gaps = 3/336 (0%)
Query: 162 NNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQ 221
++P +N + K G + AR +FD++ + +SWTT+I GYVN + +EA L
Sbjct: 46 QTDLPESNKQLKELVKTGHLGNARRMFDKMSQKDEISWTTLISGYVNANDSSEALLLFKN 105
Query: 222 MRRMS-VTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCG 280
MR S + D + C ++ +H +K+G N + + L+ MYTK G
Sbjct: 106 MRVESGLRIDPFILSLAHKACGLNSDVNYGELLHGYAVKTGLVNSVFVGSALLDMYTKNG 165
Query: 281 DLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLS 340
+ RRVF + ++V WT++I G + GY EA+ F + ++ V + T A L
Sbjct: 166 KIFEGRRVFHEMPMRNVVSWTAIITGLVRAGYNKEALVYFSEMWRSRVEYDSYTFAIALK 225
Query: 341 ACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAV 400
ACA+ G+L+ G+EI + G + + V +L M++KCG++ +FE++ +D+
Sbjct: 226 ACADSGALNYGREIHAQAMKKGFDVSSFVANTLATMYNKCGKLEYGLTLFEKMSMRDVVS 285
Query: 401 WSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSM 460
W+ +I G + A+ F +M+ + + P+ + +++S C++ ++ G ++
Sbjct: 286 WTTIITTLVQMGQEECAVQAFIRMRESD-VSPNEYTFAAVISGCANLARIEWGEQ-LHAL 343
Query: 461 QSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEM 496
+ G+ S+ ++ + + G+ + HEM
Sbjct: 344 ILHLGLAASLSVENSIMTMYAKCGQLTSSSVIFHEM 379
>gi|356557757|ref|XP_003547177.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Glycine max]
Length = 1227
Score = 410 bits (1055), Expect = e-112, Method: Compositional matrix adjust.
Identities = 217/609 (35%), Positives = 343/609 (56%), Gaps = 7/609 (1%)
Query: 9 GSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQ 68
G + E++ + M + G+ GNS+TF +LK A + + + KR+H V K+GF V
Sbjct: 532 GDYRESIYLFKKMQKLGITGNSYTFSCILKCFATLGRVGECKRIHGCVYKLGFGSYNTVV 591
Query: 69 TGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLG 128
LI Y K + S+ K+ DE+ R VVSWNS+IS + A+ +M +L
Sbjct: 592 NSLIATYFKSGEVDSAHKLFDELGDR--DVVSWNSMISGCVMNGFSHSALEFFVQMLILR 649
Query: 129 LELSASTFVSVVSGCSFRQGISMHCCVYKLGL---LNNEIPLANSVMSMYAKFGKVNEAR 185
+ + +T V+ V+ C+ +S+ ++ G+ + E+ N+++ MY+K G +N+A
Sbjct: 650 VGVDLATLVNSVAACANVGSLSLGRALHGQGVKACFSREVMFNNTLLDMYSKCGNLNDAI 709
Query: 186 SIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVG 245
F+++G+ ++VSWT++I YV G ++A L +M V+PD+ +++ CA
Sbjct: 710 QAFEKMGQKTVVSWTSLIAAYVREGLYDDAIRLFYEMESKGVSPDVYSMTSVLHACACGN 769
Query: 246 NLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIG 305
+L +H+ + K+ P+ N L+ MY KCG +E A VF + K + W +MIG
Sbjct: 770 SLDKGRDVHNYIRKNNMALCLPVSNALMDMYAKCGSMEEAYLVFSQIPVKDIVSWNTMIG 829
Query: 306 GYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLES 365
GY++ P+EA+ LF + K S RP+ T+A L AC L +L G+ I I+ NG S
Sbjct: 830 GYSKNSLPNEALKLFAEMQKES-RPDGITMACLLPACGSLAALEIGRGIHGCILRNGYSS 888
Query: 366 NRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQ 425
V +LI M+ KCG + A+ +F+ +P+KDL W+ MI+G +HG+G++A+ F KM+
Sbjct: 889 ELHVANALIDMYVKCGSLVHARLLFDMIPEKDLITWTVMISGCGMHGLGNEAIATFQKMR 948
Query: 426 HVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGR 485
+ G+KPD + +TSIL ACSHSG++++G FF SM S +EP +EHY C+VDLL R G
Sbjct: 949 -IAGIKPDEITFTSILYACSHSGLLNEGWGFFNSMISECNMEPKLEHYACMVDLLARTGN 1007
Query: 486 FDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANL 545
A I MP++ A +W LL C HH+VEL E A+++ L P + G Y+L+AN+
Sbjct: 1008 LSKAYNLIETMPIKPDATIWGALLCGCRIHHDVELAEKVAEHVFELEPDNAGYYVLLANI 1067
Query: 546 FTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKEL 605
+ A W+E R + R L K PG S +E+ G FV+ D +H + I L L
Sbjct: 1068 YAEAEKWEEVKKLRERIGKRGLKKSPGCSWIEVQGKFTTFVSADTAHPQAKSIFSLLNNL 1127
Query: 606 HIKLLEAGY 614
IK+ G+
Sbjct: 1128 RIKMKNEGH 1136
Score = 231 bits (590), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 145/488 (29%), Positives = 249/488 (51%), Gaps = 12/488 (2%)
Query: 33 FPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMP 92
+ +L+ CA + +GK VHS + G + + L+ MY C R++ D +
Sbjct: 454 YSSILQLCAEHKCLQEGKMVHSVISSNGIPIEGVLGAKLVFMYVSCGALREGRRIFDHI- 512
Query: 93 VRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCSFRQG---- 148
+ V WN ++S +++ E+I + K+M LG+ ++ TF S + C G
Sbjct: 513 LSDNKVFLWNLMMSEYAKIGDYRESIYLFKKMQKLGITGNSYTF-SCILKCFATLGRVGE 571
Query: 149 -ISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYV 207
+H CVYKLG + + NS+++ Y K G+V+ A +FDE+G+ +VSW ++I G V
Sbjct: 572 CKRIHGCVYKLGF-GSYNTVVNSLIATYFKSGEVDSAHKLFDELGDRDVVSWNSMISGCV 630
Query: 208 NVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDP 267
G + A QM + V DL +N + CA VG+L L ++H +K+ ++ E
Sbjct: 631 MNGFSHSALEFFVQMLILRVGVDLATLVNSVAACANVGSLSLGRALHGQGVKACFSREVM 690
Query: 268 LDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTS 327
+N L+ MY+KCG+L A + F+ + +K+V WTS+I Y + G +A+ LF +
Sbjct: 691 FNNTLLDMYSKCGNLNDAIQAFEKMGQKTVVSWTSLIAAYVREGLYDDAIRLFYEMESKG 750
Query: 328 VRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAK 387
V P+ ++ + L ACA SL KG+++ YI N + V +L+ M++KCG + +A
Sbjct: 751 VSPDVYSMTSVLHACACGNSLDKGRDVHNYIRKNNMALCLPVSNALMDMYAKCGSMEEAY 810
Query: 388 EVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHS 447
VF ++P KD+ W+ MI GY+ + + ++AL LF +MQ +PD + +L AC
Sbjct: 811 LVFSQIPVKDIVSWNTMIGGYSKNSLPNEALKLFAEMQKES--RPDGITMACLLPACGSL 868
Query: 448 GMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAP 507
++ G + N G + L+D+ + G + + + +M E W
Sbjct: 869 AALEIGRGIHGCILRN-GYSSELHVANALIDMYVKCGSL-VHARLLFDMIPEKDLITWTV 926
Query: 508 LLSACMKH 515
++S C H
Sbjct: 927 MISGCGMH 934
Score = 211 bits (538), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 142/452 (31%), Positives = 230/452 (50%), Gaps = 21/452 (4%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI NG L + ML V + T + ACAN+ S+ G+ +H +K
Sbjct: 625 MISGCVMNGFSHSALEFFVQMLILRVGVDLATLVNSVAACANVGSLSLGRALHGQGVKAC 684
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F ++ L+DMYSKC + + + ++M ++VVSW S+I+A+ R L D+AI +
Sbjct: 685 FSREVMFNNTLLDMYSKCGNLNDAIQAFEKMG--QKTVVSWTSLIAAYVREGLYDDAIRL 742
Query: 121 LKEMWVLGLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNE---IPLANSVMS 173
EM G+ + SV+ C S +G +H + K NN +P++N++M
Sbjct: 743 FYEMESKGVSPDVYSMTSVLHACACGNSLDKGRDVHNYIRK----NNMALCLPVSNALMD 798
Query: 174 MYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVV 233
MYAK G + EA +F +I IVSW T+IGGY NEA L +M++ S PD +
Sbjct: 799 MYAKCGSMEEAYLVFSQIPVKDIVSWNTMIGGYSKNSLPNEALKLFAEMQKES-RPDGIT 857
Query: 234 FLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVL 293
L+ C + L + +H +L++GY++E + N L+ MY KCG L AR +FD +
Sbjct: 858 MACLLPACGSLAALEIGRGIHGCILRNGYSSELHVANALIDMYVKCGSLVHARLLFDMIP 917
Query: 294 EKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKG-K 352
EK + WT MI G G +EA+ F+++ ++P+E T + L AC+ G L++G
Sbjct: 918 EKDLITWTVMISGCGMHGLGNEAIATFQKMRIAGIKPDEITFTSILYACSHSGLLNEGWG 977
Query: 353 EIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDK-DLAVWSAMINGYAIH 411
I +E + ++ + ++ G ++KA + E +P K D +W A++ G IH
Sbjct: 978 FFNSMISECNMEPKLEHYACMVDLLARTGNLSKAYNLIETMPIKPDATIWGALLCGCRIH 1037
Query: 412 GMGDQALNLFYKM-QHVEGLKPDAVVYTSILS 442
+ L K+ +HV L+PD Y +L+
Sbjct: 1038 ----HDVELAEKVAEHVFELEPDNAGYYVLLA 1065
Score = 122 bits (305), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 97/402 (24%), Positives = 181/402 (45%), Gaps = 42/402 (10%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+I G +++ + + M GV + ++ VL ACA NS+ G+ VH+++ K
Sbjct: 726 LIAAYVREGLYDDAIRLFYEMESKGVSPDVYSMTSVLHACACGNSLDKGRDVHNYIRKNN 785
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
V L+DMY+KC + V ++PV + +VSWN++I +S+ L +EA+ +
Sbjct: 786 MALCLPVSNALMDMYAKCGSMEEAYLVFSQIPV--KDIVSWNTMIGGYSKNSLPNEALKL 843
Query: 121 LKEMWVLGLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
EM T ++ C + G +H C+ + G ++E+ +AN+++ MY
Sbjct: 844 FAEMQKES-RPDGITMACLLPACGSLAALEIGRGIHGCILRNG-YSSELHVANALIDMYV 901
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K G + AR +FD I E +++WT +I G G NEA +MR + PD + F +
Sbjct: 902 KCGSLVHARLLFDMIPEKDLITWTVMISGCGMHGLGNEAIATFQKMRIAGIKPDEITFTS 961
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
++ C+ HS LL G+ SM ++C +E
Sbjct: 962 ILYACS-----------HSGLLNEGW-------GFFNSMISECN------------MEPK 991
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEE 356
+ + M+ A+ G S+A NL + + ++P+ L C + +++ E
Sbjct: 992 LEHYACMVDLLARTGNLSKAYNLIETM---PIKPDATIWGALLCGCRIHHDVELAEKVAE 1048
Query: 357 YIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDL 398
+ V N L +++++ + + K++ ER+ + L
Sbjct: 1049 H-VFELEPDNAGYYVLLANIYAEAEKWEEVKKLRERIGKRGL 1089
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 88/325 (27%), Positives = 159/325 (48%), Gaps = 12/325 (3%)
Query: 191 IGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTP--DLVVFLNLILGCAQVGNLF 248
+G + + T I + VG++ A ++ RMS DL + +++ CA+ L
Sbjct: 413 VGAFAKLDENTKICKFCEVGDLRNAV----ELLRMSQKSELDLNAYSSILQLCAEHKCLQ 468
Query: 249 LALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVL-EKSVFLWTSMIGGY 307
+HS++ +G E L LV MY CG L RR+FD +L + VFLW M+ Y
Sbjct: 469 EGKMVHSVISSNGIPIEGVLGAKLVFMYVSCGALREGRRIFDHILSDNKVFLWNLMMSEY 528
Query: 308 AQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNR 367
A++G E++ LFK++ K + N T + L A LG + + K I + G S
Sbjct: 529 AKIGDYRESIYLFKKMQKLGITGNSYTFSCILKCFATLGRVGECKRIHGCVYKLGFGSYN 588
Query: 368 QVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHV 427
V SLI + K G ++ A ++F+ + D+D+ W++MI+G ++G AL F +M +
Sbjct: 589 TVVNSLIATYFKSGEVDSAHKLFDELGDRDVVSWNSMISGCVMNGFSHSALEFFVQMLIL 648
Query: 428 EGLKPDAVVYTSILSACSHSGMVDDGLSFF-KSMQSNFGIEPSIEHYLCLVDLLGRAGRF 486
+ D + ++AC++ G + G + + +++ F E + L+D+ + G
Sbjct: 649 R-VGVDLATLVNSVAACANVGSLSLGRALHGQGVKACFSREVMFNNT--LLDMYSKCGNL 705
Query: 487 DLALKTIHEMPVEVQAQVWAPLLSA 511
+ A++ +M + W L++A
Sbjct: 706 NDAIQAFEKMGQKTVVS-WTSLIAA 729
>gi|356540339|ref|XP_003538647.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g22690-like [Glycine max]
Length = 836
Score = 410 bits (1054), Expect = e-111, Method: Compositional matrix adjust.
Identities = 229/652 (35%), Positives = 359/652 (55%), Gaps = 39/652 (5%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+IR + G ++ + Y ML G+ + +TFP +L AC+ I ++ +G +VH VLK+G
Sbjct: 101 LIRGYASAGLGDQAILLYVQMLVMGIVPDKYTFPFLLSACSKILALSEGVQVHGAVLKMG 160
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+ D FV LI Y++C RK+ D M R+VVSW S+I+ +S L+ EA+ +
Sbjct: 161 LEGDIFVSNSLIHFYAECGKVDLGRKLFDGM--LERNVVSWTSLINGYSGRDLSKEAVSL 218
Query: 121 LKEMWVLGLELSASTFVSVVSGCSFRQGISM--HCCVY--KLGLLNNEIPLANSVMSMYA 176
+M G+E + T V V+S C+ + + + C Y +LG+ + I + N+++ MY
Sbjct: 219 FFQMGEAGVEPNPVTMVCVISACAKLKDLELGKKVCSYISELGMELSTI-MVNALVDMYM 277
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K G + AR IFDE ++V + TI+ YV+ ++ + ++M + PD V L+
Sbjct: 278 KCGDICAARQIFDECANKNLVMYNTIMSNYVHHEWASDVLVILDEMLQKGPRPDKVTMLS 337
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCG---------------- 280
I CAQ+G+L + S H+ +L++G D + N ++ MY KCG
Sbjct: 338 TIAACAQLGDLSVGKSSHAYVLRNGLEGWDNISNAIIDMYMKCGKREAACKVFEHMPNKT 397
Query: 281 ---------------DLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLK 325
D+ELA R+FD +LE+ + W +MIG Q+ EA+ LF+ +
Sbjct: 398 VVTWNSLIAGLVRDGDMELAWRIFDEMLERDLVSWNTMIGALVQVSMFEEAIELFREMQN 457
Query: 326 TSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINK 385
+ + T+ SAC LG+L K + YI N + + Q+ T+L+ MFS+CG +
Sbjct: 458 QGIPGDRVTMVGIASACGYLGALDLAKWVCTYIEKNDIHVDLQLGTALVDMFSRCGDPSS 517
Query: 386 AKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACS 445
A VF+R+ +D++ W+A I A+ G + A+ LF +M + +KPD VV+ ++L+ACS
Sbjct: 518 AMHVFKRMEKRDVSAWTAAIGVMAMEGNTEGAIELFNEMLE-QKVKPDDVVFVALLTACS 576
Query: 446 HSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVW 505
H G VD G F SM+ GI P I HY C+VDLLGRAG + A+ I MP+E VW
Sbjct: 577 HGGSVDQGRQLFWSMEKAHGIRPHIVHYGCMVDLLGRAGLLEEAVDLIQSMPIEPNDVVW 636
Query: 506 APLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDR 565
LL+AC KH NVEL YAA+ L L P G ++L++N++ SAG W + A R M ++
Sbjct: 637 GSLLAACRKHKNVELAHYAAEKLTQLAPERVGIHVLLSNIYASAGKWTDVARVRLQMKEK 696
Query: 566 RLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKELHIKLLEAGYIAE 617
+ K PG S +E+ G + F +GD SH + I L+E++ +L EAGY+ +
Sbjct: 697 GVQKVPGSSSIEVQGLIHEFTSGDESHAENTHIGLMLEEINCRLSEAGYVPD 748
Score = 213 bits (541), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 126/399 (31%), Positives = 217/399 (54%), Gaps = 11/399 (2%)
Query: 95 LRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCS----FRQGIS 150
+ S+ +N +I ++ A L D+AIL+ +M V+G+ TF ++S CS +G+
Sbjct: 92 MASLFMYNCLIRGYASAGLGDQAILLYVQMLVMGIVPDKYTFPFLLSACSKILALSEGVQ 151
Query: 151 MHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVG 210
+H V K+G L +I ++NS++ YA+ GKV+ R +FD + E ++VSWT++I GY
Sbjct: 152 VHGAVLKMG-LEGDIFVSNSLIHFYAECGKVDLGRKLFDGMLERNVVSWTSLINGYSGRD 210
Query: 211 NVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDN 270
EA L QM V P+ V + +I CA++ +L L + S + + G + N
Sbjct: 211 LSKEAVSLFFQMGEAGVEPNPVTMVCVISACAKLKDLELGKKVCSYISELGMELSTIMVN 270
Query: 271 LLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRP 330
LV MY KCGD+ AR++FD K++ ++ +++ Y + S+ + + +L+ RP
Sbjct: 271 ALVDMYMKCGDICAARQIFDECANKNLVMYNTIMSNYVHHEWASDVLVILDEMLQKGPRP 330
Query: 331 NEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVF 390
++ T+ +T++ACA+LG LS GK Y++ NGLE + ++I M+ KCG+ A +VF
Sbjct: 331 DKVTMLSTIAACAQLGDLSVGKSSHAYVLRNGLEGWDNISNAIIDMYMKCGKREAACKVF 390
Query: 391 ERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMV 450
E +P+K + W+++I G G + A +F +M L+ D V + +++ A M
Sbjct: 391 EHMPNKTVVTWNSLIAGLVRDGDMELAWRIFDEM-----LERDLVSWNTMIGALVQVSMF 445
Query: 451 DDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLA 489
++ + F+ MQ N GI + + G G DLA
Sbjct: 446 EEAIELFREMQ-NQGIPGDRVTMVGIASACGYLGALDLA 483
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 109/385 (28%), Positives = 202/385 (52%), Gaps = 11/385 (2%)
Query: 144 SFRQGISMHCCVYKLGLLNNEIPLAN--SVMSMYAKFG---KVNEARSIF--DEIGETSI 196
+ ++ +HC + K GLL ++ P +N +++ + G ++ AR+ F D+ S+
Sbjct: 37 TLKELKQLHCDMMKKGLLCHK-PASNLNKLIASSVQIGTLESLDYARNAFGDDDGNMASL 95
Query: 197 VSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSL 256
+ +I GY + G ++A L QM M + PD F L+ C+++ L + +H
Sbjct: 96 FMYNCLIRGYASAGLGDQAILLYVQMLVMGIVPDKYTFPFLLSACSKILALSEGVQVHGA 155
Query: 257 LLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEA 316
+LK G + + N L+ Y +CG ++L R++FD +LE++V WTS+I GY+ EA
Sbjct: 156 VLKMGLEGDIFVSNSLIHFYAECGKVDLGRKLFDGMLERNVVSWTSLINGYSGRDLSKEA 215
Query: 317 VNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHM 376
V+LF ++ + V PN T+ +SACA+L L GK++ YI G+E + + +L+ M
Sbjct: 216 VSLFFQMGEAGVEPNPVTMVCVISACAKLKDLELGKKVCSYISELGMELSTIMVNALVDM 275
Query: 377 FSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVV 436
+ KCG I A+++F+ +K+L +++ +++ Y H L + +M +G +PD V
Sbjct: 276 YMKCGDICAARQIFDECANKNLVMYNTIMSNYVHHEWASDVLVILDEMLQ-KGPRPDKVT 334
Query: 437 YTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEM 496
S ++AC+ G + G S + N G+E ++D+ + G+ + A K M
Sbjct: 335 MLSTIAACAQLGDLSVGKSSHAYVLRN-GLEGWDNISNAIIDMYMKCGKREAACKVFEHM 393
Query: 497 PVEVQAQVWAPLLSACMKHHNVELG 521
P + W L++ ++ ++EL
Sbjct: 394 PNKT-VVTWNSLIAGLVRDGDMELA 417
>gi|359483532|ref|XP_002265722.2| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Vitis vinifera]
Length = 824
Score = 410 bits (1053), Expect = e-111, Method: Compositional matrix adjust.
Identities = 222/637 (34%), Positives = 348/637 (54%), Gaps = 54/637 (8%)
Query: 32 TFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLD-- 89
T+ VL+ CA++ SI DG+R+HS + + D + + L+ MY C D R++ D
Sbjct: 103 TYCSVLQLCADLKSIQDGRRIHSIIQSNDVEVDGVLGSKLVFMYVTCGDLREGRRIFDKV 162
Query: 90 --------------------------------EMPVRL-------------RSVVSWNSI 104
E+ +R R V+SWNS+
Sbjct: 163 ANEKVFLWNLLMNGYAKIGNFRESLSLFKRMRELGIRRVESARKLFDELGDRDVISWNSM 222
Query: 105 ISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGL 160
IS + L+++ + + ++M +LG+ +T VSVV+GCS G ++H K
Sbjct: 223 ISGYVSNGLSEKGLDLFEQMLLLGINTDLATMVSVVAGCSNTGMLLLGRALHGYAIKASF 282
Query: 161 LNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCN 220
E+ L N ++ MY+K G +N A +F+ +GE S+VSWT++I GY G + + L +
Sbjct: 283 -GKELTLNNCLLDMYSKSGNLNSAIQVFETMGERSVVSWTSMIAGYAREGLSDMSVRLFH 341
Query: 221 QMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCG 280
+M + ++PD+ ++ CA G L +H+ + ++ ++ + N L+ MY KCG
Sbjct: 342 EMEKEGISPDIFTITTILHACACTGLLENGKDVHNYIKENKMQSDLFVSNALMDMYAKCG 401
Query: 281 DLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLS 340
+ A VF + K + W +MIGGY++ P+EA+NLF + S +PN T+A L
Sbjct: 402 SMGDAHSVFSEMQVKDIVSWNTMIGGYSKNSLPNEALNLFVEMQYNS-KPNSITMACILP 460
Query: 341 ACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAV 400
ACA L +L +G+EI +I+ NG +R V +L+ M+ KCG + A+ +F+ +P+KDL
Sbjct: 461 ACASLAALERGQEIHGHILRNGFSLDRHVANALVDMYLKCGALGLARLLFDMIPEKDLVS 520
Query: 401 WSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSM 460
W+ MI GY +HG G +A+ F +M++ G++PD V + SIL ACSHSG++D+G FF M
Sbjct: 521 WTVMIAGYGMHGYGSEAIAAFNEMRN-SGIEPDEVSFISILYACSHSGLLDEGWGFFNMM 579
Query: 461 QSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVEL 520
++N IEP EHY C+VDLL RAG A K I MP+E A +W LL C +H+V+L
Sbjct: 580 RNNCCIEPKSEHYACIVDLLARAGNLSKAYKFIKMMPIEPDATIWGALLCGCRIYHDVKL 639
Query: 521 GEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDG 580
E A+++ L P +TG Y+L+AN++ A W+E R + R L K PG S +EI G
Sbjct: 640 AEKVAEHVFELEPENTGYYVLLANIYAEAEKWEEVKKLRERIGRRGLRKNPGCSWIEIKG 699
Query: 581 SVQVFVAGDRSHHLSVDIRKTLKELHIKLLEAGYIAE 617
V +FV GD SH L+ I LK+ ++ E G+ +
Sbjct: 700 KVHIFVTGDSSHPLANKIELLLKKTRTRMKEEGHFPK 736
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 133/449 (29%), Positives = 234/449 (52%), Gaps = 15/449 (3%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI +NG E+ L + ML G++ + T V+ C+N + G+ +H + +K
Sbjct: 222 MISGYVSNGLSEKGLDLFEQMLLLGINTDLATMVSVVAGCSNTGMLLLGRALHGYAIKAS 281
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F ++ + L+DMYSK + S+ +V + M RSVVSW S+I+ ++R L+D ++ +
Sbjct: 282 FGKELTLNNCLLDMYSKSGNLNSAIQVFETMGE--RSVVSWTSMIAGYAREGLSDMSVRL 339
Query: 121 LKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
EM G+ T +++ C+ G +H + K + +++ ++N++M MYA
Sbjct: 340 FHEMEKEGISPDIFTITTILHACACTGLLENGKDVHNYI-KENKMQSDLFVSNALMDMYA 398
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K G + +A S+F E+ IVSW T+IGGY NEA L +M+ S P+ +
Sbjct: 399 KCGSMGDAHSVFSEMQVKDIVSWNTMIGGYSKNSLPNEALNLFVEMQYNS-KPNSITMAC 457
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
++ CA + L +H +L++G++ + + N LV MY KCG L LAR +FD + EK
Sbjct: 458 ILPACASLAALERGQEIHGHILRNGFSLDRHVANALVDMYLKCGALGLARLLFDMIPEKD 517
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEE 356
+ WT MI GY GY SEA+ F + + + P+E + + L AC+ G L +G
Sbjct: 518 LVSWTVMIAGYGMHGYGSEAIAAFNEMRNSGIEPDEVSFISILYACSHSGLLDEGWGFFN 577
Query: 357 YIVLN-GLESNRQVQTSLIHMFSKCGRINKAKEVFERVP-DKDLAVWSAMINGYAIHGMG 414
+ N +E + ++ + ++ G ++KA + + +P + D +W A++ G I+
Sbjct: 578 MMRNNCCIEPKSEHYACIVDLLARAGNLSKAYKFIKMMPIEPDATIWGALLCGCRIY--- 634
Query: 415 DQALNLFYKM-QHVEGLKPDAVVYTSILS 442
+ L K+ +HV L+P+ Y +L+
Sbjct: 635 -HDVKLAEKVAEHVFELEPENTGYYVLLA 662
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 93/361 (25%), Positives = 166/361 (45%), Gaps = 57/361 (15%)
Query: 190 EIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVV--FLNLILGCAQVGNL 247
E + I + I + +GN+ A L NQ S PDL + + +++ CA + ++
Sbjct: 62 ETIDCKITDYNIEICRFCELGNLRRAMELINQ----SPKPDLELRTYCSVLQLCADLKSI 117
Query: 248 FLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGY 307
+HS++ + + L + LV MY CGDL RR+FD V + VFLW ++ GY
Sbjct: 118 QDGRRIHSIIQSNDVEVDGVLGSKLVFMYVTCGDLREGRRIFDKVANEKVFLWNLLMNGY 177
Query: 308 AQLGYPSEAVNLFKRLLKTSVRPNE----------------------------------- 332
A++G E+++LFKR+ + +R E
Sbjct: 178 AKIGNFRESLSLFKRMRELGIRRVESARKLFDELGDRDVISWNSMISGYVSNGLSEKGLD 237
Query: 333 --------------ATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFS 378
AT+ + ++ C+ G L G+ + Y + + L+ M+S
Sbjct: 238 LFEQMLLLGINTDLATMVSVVAGCSNTGMLLLGRALHGYAIKASFGKELTLNNCLLDMYS 297
Query: 379 KCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYT 438
K G +N A +VFE + ++ + W++MI GYA G+ D ++ LF++M+ EG+ PD T
Sbjct: 298 KSGNLNSAIQVFETMGERSVVSWTSMIAGYAREGLSDMSVRLFHEMEK-EGISPDIFTIT 356
Query: 439 SILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPV 498
+IL AC+ +G++++G ++ N ++ + L+D+ + G A EM V
Sbjct: 357 TILHACACTGLLENGKDVHNYIKEN-KMQSDLFVSNALMDMYAKCGSMGDAHSVFSEMQV 415
Query: 499 E 499
+
Sbjct: 416 K 416
>gi|449438556|ref|XP_004137054.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g16860-like [Cucumis sativus]
gi|449479088|ref|XP_004155501.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g16860-like [Cucumis sativus]
Length = 855
Score = 405 bits (1042), Expect = e-110, Method: Compositional matrix adjust.
Identities = 237/672 (35%), Positives = 364/672 (54%), Gaps = 57/672 (8%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+IR S G ++TL Y M + G + +TFP VLKAC I S+ G VH+ V G
Sbjct: 98 LIRRSVKLGLLDDTLGFYCQMQRLGWLPDHYTFPFVLKACGEIPSLRHGASVHAIVCANG 157
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVR-LRSVVSWNSIISAHSRACLNDEAIL 119
+ F+ ++ MY +C + ++ DE+ R + +VSWNSI++A+ + + A+
Sbjct: 158 LGSNVFICNSIVAMYGRCGALDDAHQMFDEVLERKIEDIVSWNSILAAYVQGGQSRTALR 217
Query: 120 VLKEM---WVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVM 172
+ M + L L A T V+++ C+ + G +H + GL++ ++ + N+++
Sbjct: 218 IAFRMGNHYSLKLRPDAITLVNILPACASVFALQHGKQVHGFSVRNGLVD-DVFVGNALV 276
Query: 173 SMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVN------------------- 213
SMYAK K+NEA +F+ I + +VSW ++ GY +G+ +
Sbjct: 277 SMYAKCSKMNEANKVFEGIKKKDVVSWNAMVTGYSQIGSFDSALSLFKMMQEEDIKLDVI 336
Query: 214 ----------------EAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLL 257
EA + QM+ + P++V +L+ GCA VG L H+ +
Sbjct: 337 TWSAVIAGYAQKGHGFEALDVFRQMQLYGLEPNVVTLASLLSGCASVGALLYGKQTHAYV 396
Query: 258 LKS--GYNNEDPLDNLLV-----SMYTKCGDLELARRVFDAV--LEKSVFLWTSMIGGYA 308
+K+ N D D+LLV MY KC +AR +FD++ +K+V WT MIGGYA
Sbjct: 397 IKNILNLNWNDKEDDLLVLNGLIDMYAKCKSYRVARSIFDSIEGKDKNVVTWTVMIGGYA 456
Query: 309 QLGYPSEAVNLFKRLLK--TSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESN 366
Q G ++A+ LF ++ K TS++PN TL+ L ACA LG L G+++ Y + N ES
Sbjct: 457 QHGEANDALKLFAQIFKQKTSLKPNAFTLSCALMACARLGELRLGRQLHAYALRNENESE 516
Query: 367 -RQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQ 425
V LI M+SK G I+ A+ VF+ + +++ W++++ GY +HG G++AL+LF +MQ
Sbjct: 517 VLYVGNCLIDMYSKSGDIDAARAVFDNMKLRNVVSWTSLMTGYGMHGRGEEALHLFDQMQ 576
Query: 426 HVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGR 485
+ G D + + +L ACSHSGMVD G+ +F M FGI P EHY C+VDLLGRAGR
Sbjct: 577 KL-GFAVDGITFLVVLYACSHSGMVDQGMIYFHDMVKGFGITPGAEHYACMVDLLGRAGR 635
Query: 486 FDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANL 545
+ A++ I M +E A VW LLSA H N+ELGEYAA L L + G+Y L++NL
Sbjct: 636 LNEAMELIKNMSMEPTAVVWVALLSASRIHANIELGEYAASKLTELGAENDGSYTLLSNL 695
Query: 546 FTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKEL 605
+ +A WK+ A R LM + K PG S ++ S F GDRSH S I L +L
Sbjct: 696 YANARRWKDVARIRSLMKHTGIRKRPGCSWIQGKKSTTTFFVGDRSHPESEQIYNLLLDL 755
Query: 606 HIKLLEAGYIAE 617
++ + GY+ +
Sbjct: 756 IKRIKDMGYVPQ 767
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 92/304 (30%), Positives = 167/304 (54%), Gaps = 10/304 (3%)
Query: 175 YAKFGKVNEARSIFDEI--GETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLV 232
Y + G EA S+ + +++ W +I V +G +++ G QM+R+ PD
Sbjct: 69 YIECGASAEAVSLLQRLIPSHSTVFWWNALIRRSVKLGLLDDTLGFYCQMQRLGWLPDHY 128
Query: 233 VFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAV 292
F ++ C ++ +L S+H+++ +G + + N +V+MY +CG L+ A ++FD V
Sbjct: 129 TFPFVLKACGEIPSLRHGASVHAIVCANGLGSNVFICNSIVAMYGRCGALDDAHQMFDEV 188
Query: 293 LEK---SVFLWTSMIGGYAQLGYPSEAVNLFKRL---LKTSVRPNEATLATTLSACAELG 346
LE+ + W S++ Y Q G A+ + R+ +RP+ TL L ACA +
Sbjct: 189 LERKIEDIVSWNSILAAYVQGGQSRTALRIAFRMGNHYSLKLRPDAITLVNILPACASVF 248
Query: 347 SLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMIN 406
+L GK++ + V NGL + V +L+ M++KC ++N+A +VFE + KD+ W+AM+
Sbjct: 249 ALQHGKQVHGFSVRNGLVDDVFVGNALVSMYAKCSKMNEANKVFEGIKKKDVVSWNAMVT 308
Query: 407 GYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGI 466
GY+ G D AL+LF KM E +K D + ++++++ + G + L F+ MQ +G+
Sbjct: 309 GYSQIGSFDSALSLF-KMMQEEDIKLDVITWSAVIAGYAQKGHGFEALDVFRQMQL-YGL 366
Query: 467 EPSI 470
EP++
Sbjct: 367 EPNV 370
>gi|334185294|ref|NP_187883.2| mitochondrial editing factor 22 [Arabidopsis thaliana]
gi|75274142|sp|Q9LTV8.1|PP224_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g12770
gi|11994419|dbj|BAB02421.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332641723|gb|AEE75244.1| mitochondrial editing factor 22 [Arabidopsis thaliana]
Length = 694
Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust.
Identities = 211/602 (35%), Positives = 352/602 (58%), Gaps = 15/602 (2%)
Query: 24 TGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVS 83
+G+H +SF L+ A K++H+ +L +G Q F+ T LI S D
Sbjct: 16 SGIHSDSFYASLIDSATHKAQL----KQIHARLLVLGLQFSGFLITKLIHASSSFGDITF 71
Query: 84 SRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGC 143
+R+V D++P + WN+II +SR +A+L+ M + + + TF ++ C
Sbjct: 72 ARQVFDDLP--RPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKAC 129
Query: 144 S----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFD--EIGETSIV 197
S + G +H V++LG + ++ + N ++++YAK ++ AR++F+ + E +IV
Sbjct: 130 SGLSHLQMGRFVHAQVFRLGF-DADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIV 188
Query: 198 SWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLL 257
SWT I+ Y G EA + +QMR+M V PD V ++++ + +L S+H+ +
Sbjct: 189 SWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASV 248
Query: 258 LKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAV 317
+K G E L L +MY KCG + A+ +FD + ++ LW +MI GYA+ GY EA+
Sbjct: 249 VKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAI 308
Query: 318 NLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMF 377
++F ++ VRP+ ++ + +SACA++GSL + + + EY+ + + + ++LI MF
Sbjct: 309 DMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMF 368
Query: 378 SKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVY 437
+KCG + A+ VF+R D+D+ VWSAMI GY +HG +A++L+ M+ G+ P+ V +
Sbjct: 369 AKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMER-GGVHPNDVTF 427
Query: 438 TSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMP 497
+L AC+HSGMV +G FF M ++ I P +HY C++DLLGRAG D A + I MP
Sbjct: 428 LGLLMACNHSGMVREGWWFFNRM-ADHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMP 486
Query: 498 VEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAAT 557
V+ VW LLSAC KH +VELGEYAA+ L +++P +TG+Y+ ++NL+ +A +W A
Sbjct: 487 VQPGVTVWGALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAE 546
Query: 558 ARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKELHIKLLEAGYIAE 617
R M ++ L K+ G S VE+ G ++ F GD+SH +I + ++ + +L E G++A
Sbjct: 547 VRVRMKEKGLNKDVGCSWVEVRGRLEAFRVGDKSHPRYEEIERQVEWIESRLKEGGFVAN 606
Query: 618 AD 619
D
Sbjct: 607 KD 608
Score = 247 bits (630), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 151/492 (30%), Positives = 255/492 (51%), Gaps = 44/492 (8%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+IR + N F++ L YS+M V +SFTFP +LKAC+ ++ + G+ VH+ V ++G
Sbjct: 90 IIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLG 149
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F D FVQ GLI +Y+KC S+R V + +P+ R++VSW +I+SA+++ EA+ +
Sbjct: 150 FDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEI 209
Query: 121 LKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
+M + ++ VSV++ + +QG S+H V K+G L E L S+ +MYA
Sbjct: 210 FSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMG-LEIEPDLLISLNTMYA 268
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K G+V A+ +FD++ +++ W +I GY G EA + ++M V PD + +
Sbjct: 269 KCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITS 328
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
I CAQVG+L A SM+ + +S Y ++ + + L+ M+ KCG +E AR VFD L++
Sbjct: 329 AISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRD 388
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEE 356
V +W++MI GY G EA++L++ + + V PN+ T L AC G + +G
Sbjct: 389 VVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFN 448
Query: 357 YIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQ 416
+ + + +Q +I + + G +++A EV + +P
Sbjct: 449 RMADHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMP---------------------- 486
Query: 417 ALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPS-IEHYLC 475
++P V+ ++LSAC V+ G + Q F I+PS HY+
Sbjct: 487 -------------VQPGVTVWGALLSACKKHRHVELGE---YAAQQLFSIDPSNTGHYVQ 530
Query: 476 LVDLLGRAGRFD 487
L +L A +D
Sbjct: 531 LSNLYAAARLWD 542
>gi|328774753|gb|AEB39776.1| pentatricopeptide repeat protein 78 [Funaria hygrometrica]
Length = 1020
Score = 404 bits (1037), Expect = e-110, Method: Compositional matrix adjust.
Identities = 213/613 (34%), Positives = 352/613 (57%), Gaps = 8/613 (1%)
Query: 9 GSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQ 68
G E + M Q GV N T+ VL A + ++ GK VHSH+L G + D V
Sbjct: 324 GHSEIAFEIFQKMQQEGVVPNRITYINVLNAFSGPAALKWGKTVHSHILNAGHESDLAVG 383
Query: 69 TGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLG 128
T L+ MY+KC + R+V +++ R +++WN++I + +EA + +M G
Sbjct: 384 TALVKMYAKCGSYKDCRQVFEKLVNR--DLIAWNTMIGGLAEGGNWEEASEIYHQMQREG 441
Query: 129 LELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEA 184
+ + T+V +++ C + G +H V K G + +I + N+++SMYA+ G + +A
Sbjct: 442 MMPNKITYVILLNACVNPTALHWGREIHSRVVKDGFMF-DISVQNALISMYARCGSIKDA 500
Query: 185 RSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQV 244
R +F+++ I+SWT +IGG G EA + M++ + P+ V + +++ C+
Sbjct: 501 RLLFNKMVRKDIISWTAMIGGLAKSGLGAEALAVFQDMQQAGLKPNRVTYTSILNACSSP 560
Query: 245 GNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMI 304
L +H ++++G + + N LV+MY+ CG ++ AR+VFD + ++ + + +MI
Sbjct: 561 AALDWGRRIHQQVIEAGLATDAHVANTLVNMYSMCGSVKDARQVFDRMTQRDIVAYNAMI 620
Query: 305 GGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLE 364
GGYA EA+ LF RL + ++P++ T L+ACA GSL KEI ++ +G
Sbjct: 621 GGYAAHNLGKEALKLFDRLQEEGLKPDKVTYINMLNACANSGSLEWAKEIHSLVLKDGYL 680
Query: 365 SNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKM 424
S+ + +L+ ++KCG + A VF+++ +++ W+A+I G A HG G L LF +M
Sbjct: 681 SDTSLGNALVSTYAKCGSFSDALLVFDKMMKRNVISWNAIIGGCAQHGRGQDVLQLFERM 740
Query: 425 QHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAG 484
+ +EG+KPD V + S+LSACSH+G++++G +F SM +FGI P+IEHY C+VDLLGRAG
Sbjct: 741 K-MEGIKPDIVTFVSLLSACSHAGLLEEGRRYFCSMSRDFGITPTIEHYGCMVDLLGRAG 799
Query: 485 RFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMAN 544
+ D I MP + ++W LL AC H NV + E AA++ L L+P + Y+ +++
Sbjct: 800 QLDEVEALIKTMPFQANTRIWGALLGACRIHGNVPVAERAAESSLKLDPDNAAVYVALSH 859
Query: 545 LFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKE 604
++ +AGMW AA R LM+ R +TKEPG S +E+ + FVA DRSH S I L +
Sbjct: 860 MYAAAGMWDSAAKLRKLMEQRGVTKEPGRSWIEVGDKLHYFVAEDRSHPESEKIYAELDK 919
Query: 605 LHIKLLEAGYIAE 617
L + GY+ +
Sbjct: 920 LTHAMKMEGYVPD 932
Score = 270 bits (691), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 158/522 (30%), Positives = 279/522 (53%), Gaps = 21/522 (4%)
Query: 12 EETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGL 71
+ + + Q G NS + +LK C + + G+ VH H+++ D + L
Sbjct: 123 DRAMDVVQYLQQQGARVNSCDYMKMLKRCIEVKDLVAGREVHEHIIQHCTVLDQYTVNAL 182
Query: 72 IDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLEL 131
I+MY +C +R+V +++ R+V SWN+++ + + +EA+ +L+EM GL L
Sbjct: 183 INMYIQCGSIEEARQVWNKLNHTERTVHSWNAMVVGYVQYGYIEEALKLLREMQQHGLAL 242
Query: 132 SASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSI 187
+T + ++S C + G +H K LL ++ +AN +++MYAK G ++EAR +
Sbjct: 243 GRATTMRLLSSCKSPSALECGREIHVEAMKARLL-FDVNVANCILNMYAKCGSIHEAREV 301
Query: 188 FDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNL 247
FD++ S+VSWT IIGGY + G+ AF + +M++ V P+ + ++N++ + L
Sbjct: 302 FDKMETKSVVSWTIIIGGYADCGHSEIAFEIFQKMQQEGVVPNRITYINVLNAFSGPAAL 361
Query: 248 FLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGY 307
++HS +L +G+ ++ + LV MY KCG + R+VF+ ++ + + W +MIGG
Sbjct: 362 KWGKTVHSHILNAGHESDLAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGL 421
Query: 308 AQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNR 367
A+ G EA ++ ++ + + PN+ T L+AC +L G+EI +V +G +
Sbjct: 422 AEGGNWEEASEIYHQMQREGMMPNKITYVILLNACVNPTALHWGREIHSRVVKDGFMFDI 481
Query: 368 QVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHV 427
VQ +LI M+++CG I A+ +F ++ KD+ W+AMI G A G+G +AL +F MQ
Sbjct: 482 SVQNALISMYARCGSIKDARLLFNKMVRKDIISWTAMIGGLAKSGLGAEALAVFQDMQQA 541
Query: 428 EGLKPDAVVYTSILSACSHSGMVDDGLSFFKS-MQSNFGIEPSIEHYLCLVDLLGRAGRF 486
GLKP+ V YTSIL+ACS +D G + +++ + + + LV++ G
Sbjct: 542 -GLKPNRVTYTSILNACSSPAALDWGRRIHQQVIEAGLATDAHVAN--TLVNMYSMCG-- 596
Query: 487 DLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNL 528
V+ QV+ + + +N +G YAA NL
Sbjct: 597 ----------SVKDARQVFDRMTQRDIVAYNAMIGGYAAHNL 628
Score = 266 bits (679), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 151/522 (28%), Positives = 279/522 (53%), Gaps = 16/522 (3%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
M+ G EE L M Q G+ T +L +C + +++ G+ +H +K
Sbjct: 215 MVVGYVQYGYIEEALKLLREMQQHGLALGRATTMRLLSSCKSPSALECGREIHVEAMKAR 274
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
D V +++MY+KC +R+V D+M + SVVSW II ++ ++ A +
Sbjct: 275 LLFDVNVANCILNMYAKCGSIHEAREVFDKMETK--SVVSWTIIIGGYADCGHSEIAFEI 332
Query: 121 LKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
++M G+ + T+++V++ S + G ++H + G +++ + +++ MYA
Sbjct: 333 FQKMQQEGVVPNRITYINVLNAFSGPAALKWGKTVHSHILNAGH-ESDLAVGTALVKMYA 391
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K G + R +F+++ +++W T+IGG GN EA + +QM+R + P+ + ++
Sbjct: 392 KCGSYKDCRQVFEKLVNRDLIAWNTMIGGLAEGGNWEEASEIYHQMQREGMMPNKITYVI 451
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
L+ C L +HS ++K G+ + + N L+SMY +CG ++ AR +F+ ++ K
Sbjct: 452 LLNACVNPTALHWGREIHSRVVKDGFMFDISVQNALISMYARCGSIKDARLLFNKMVRKD 511
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEE 356
+ WT+MIGG A+ G +EA+ +F+ + + ++PN T + L+AC+ +L G+ I +
Sbjct: 512 IISWTAMIGGLAKSGLGAEALAVFQDMQQAGLKPNRVTYTSILNACSSPAALDWGRRIHQ 571
Query: 357 YIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQ 416
++ GL ++ V +L++M+S CG + A++VF+R+ +D+ ++AMI GYA H +G +
Sbjct: 572 QVIEAGLATDAHVANTLVNMYSMCGSVKDARQVFDRMTQRDIVAYNAMIGGYAAHNLGKE 631
Query: 417 ALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQS---NFGIEPSIEHY 473
AL LF ++Q EGLKPD V Y ++L+AC++SG L + K + S G
Sbjct: 632 ALKLFDRLQE-EGLKPDKVTYINMLNACANSG----SLEWAKEIHSLVLKDGYLSDTSLG 686
Query: 474 LCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKH 515
LV + G F AL +M ++ W ++ C +H
Sbjct: 687 NALVSTYAKCGSFSDALLVFDKM-MKRNVISWNAIIGGCAQH 727
>gi|225452956|ref|XP_002279032.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39350
[Vitis vinifera]
gi|296082987|emb|CBI22288.3| unnamed protein product [Vitis vinifera]
Length = 676
Score = 404 bits (1037), Expect = e-109, Method: Compositional matrix adjust.
Identities = 217/584 (37%), Positives = 343/584 (58%), Gaps = 9/584 (1%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVH-GNSFTFPLVLKACANINSIWDGKRVHSHVLKV 59
MIR TN+G + L + ML +G +++T+P V+KAC + G +H+ +
Sbjct: 93 MIRMYTNSGLSYDALGLFVQMLASGRRWPDNYTYPFVIKACGDYLLPEMGALIHARTVMS 152
Query: 60 GFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAIL 119
GF DAFVQ L+ MY C + +R+V D M R R++VSWN++I+ + + EA++
Sbjct: 153 GFDSDAFVQNSLMAMYMNCGEMEVARRVFDLM--RERTLVSWNTMINGYFKNGCVKEALM 210
Query: 120 VLKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGLLNN---EIPLANSVMSMYA 176
V M G+E +T VSV+ CS+ + + + V+ L + N +I + NS++ MYA
Sbjct: 211 VFDWMIGKGIEPDCATVVSVLPVCSYLKELEVGRRVHALVEVKNLGEDISVWNSLLDMYA 270
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K G ++EA+ IF E+ + +VSWTT++ GY+ G+ A LC M+ SV P+ V +
Sbjct: 271 KCGNMDEAQMIFYEMDKRDVVSWTTMMNGYILNGDARSALLLCQMMQFESVKPNFVTLAS 330
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
++ CA + +L +H ++ +E ++ L+ MY KC ++ L+ RVF ++
Sbjct: 331 VLSACASLYSLKHGRCLHGWAIRQKLESEVIVETALIDMYAKCNNVNLSFRVFSKTSKQR 390
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEE 356
W ++I G G +A+ LFK++L +V PN+ATL + L A A L L + + +
Sbjct: 391 TAPWNAIISGCIHNGLSRKAIELFKQMLMEAVDPNDATLNSLLPAYAFLTDLQQARNMHG 450
Query: 357 YIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVP--DKDLAVWSAMINGYAIHGMG 414
Y++ +G S +V T LI ++SKCG + A +F +P DKD+ WSA+I GY +HG G
Sbjct: 451 YLIRSGFLSRIEVATILIDIYSKCGSLESAHNIFNGIPKKDKDIITWSAIIAGYGMHGHG 510
Query: 415 DQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYL 474
+ A++LF +M G+KP+ + +TSIL ACSH+G+VD+GL FK M + + +HY
Sbjct: 511 ETAISLFDQMVQ-SGVKPNEITFTSILHACSHAGLVDEGLGLFKFMLEDNQMSLRTDHYT 569
Query: 475 CLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPG 534
C++DLLGRAGR + A + I M VW LL +C+ H NVELGE AAK L L PG
Sbjct: 570 CVIDLLGRAGRLEEAYELIRTMAFRPNHAVWGALLGSCVIHENVELGEVAAKWLFELEPG 629
Query: 535 STGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEI 578
+TGNY+L+AN++++ G W++A R +M++ L K P S +E+
Sbjct: 630 NTGNYVLLANIYSAVGRWRDAEHVRLMMNNIGLRKTPAHSLIEV 673
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 132/473 (27%), Positives = 241/473 (50%), Gaps = 19/473 (4%)
Query: 36 VLKACANINSIWDGKRVHSHVLKVGFQQDAFVQ---TGLIDMYSKCSDFVSSRKVLDEMP 92
+L+ C + SI + K++H+H + +G + + L Y+ +RK+ DE+
Sbjct: 24 LLQRCTSRKSIPNTKQIHAHTITLGLLSSPYSHHLLSSLAAAYAMFGCAPHARKLFDEL- 82
Query: 93 VRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSAS-TFVSVVSGCS----FRQ 147
R S+ SWN++I ++ + L+ +A+ + +M G + T+ V+ C
Sbjct: 83 -RNPSLFSWNAMIRMYTNSGLSYDALGLFVQMLASGRRWPDNYTYPFVIKACGDYLLPEM 141
Query: 148 GISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYV 207
G +H G +++ + NS+M+MY G++ AR +FD + E ++VSW T+I GY
Sbjct: 142 GALIHARTVMSGF-DSDAFVQNSLMAMYMNCGEMEVARRVFDLMRERTLVSWNTMINGYF 200
Query: 208 NVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDP 267
G V EA + + M + PD ++++ C+ + L + +H+L+ +
Sbjct: 201 KNGCVKEALMVFDWMIGKGIEPDCATVVSVLPVCSYLKELEVGRRVHALVEVKNLGEDIS 260
Query: 268 LDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTS 327
+ N L+ MY KCG+++ A+ +F + ++ V WT+M+ GY G A+ L + + S
Sbjct: 261 VWNSLLDMYAKCGNMDEAQMIFYEMDKRDVVSWTTMMNGYILNGDARSALLLCQMMQFES 320
Query: 328 VRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAK 387
V+PN TLA+ LSACA L SL G+ + + + LES V+T+LI M++KC +N +
Sbjct: 321 VKPNFVTLASVLSACASLYSLKHGRCLHGWAIRQKLESEVIVETALIDMYAKCNNVNLSF 380
Query: 388 EVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHS 447
VF + + A W+A+I+G +G+ +A+ LF +M +E + P+ S+L A ++
Sbjct: 381 RVFSKTSKQRTAPWNAIISGCIHNGLSRKAIELFKQML-MEAVDPNDATLNSLLPA--YA 437
Query: 448 GMVDDGLSFFKSMQSNF---GIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMP 497
+ D L ++M G IE L+D+ + G + A + +P
Sbjct: 438 FLTD--LQQARNMHGYLIRSGFLSRIEVATILIDIYSKCGSLESAHNIFNGIP 488
>gi|328774755|gb|AEB39777.1| pentatricopeptide repeat protein 91 [Funaria hygrometrica]
Length = 890
Score = 404 bits (1037), Expect = e-109, Method: Compositional matrix adjust.
Identities = 218/661 (32%), Positives = 356/661 (53%), Gaps = 44/661 (6%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI N + T+ M + N TF +LKAC N + + + +H+ V G
Sbjct: 150 MIAAYAGNNHPAKAFDTFERMKDANIEPNRITFLSILKACNNYSMLEKAREIHTVVKASG 209
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+ D V T LI MYSKC + + ++ +M + R+VVSW +II A+++ +EA +
Sbjct: 210 METDVAVATALITMYSKCGEISLACEIFQKM--KERNVVSWTAIIQANAQHRKLNEAFEL 267
Query: 121 LKEMWVLGLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
++M G+ +A TFVS+++ C + +G +H + + GL ++ +AN++++MY
Sbjct: 268 YEKMLQAGISPNAVTFVSLLNSCNTPEALNRGRRIHSHISERGL-ETDVVVANALITMYC 326
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVG-----NVNEAFGLCNQMRRMSVTPDL 231
K + +AR FD + + ++SW+ +I GY G +++E F L +MRR V P+
Sbjct: 327 KCNCIQDARETFDRMSKRDVISWSAMIAGYAQSGYQDKESLDEVFQLLERMRREGVFPNK 386
Query: 232 VVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYT-------------- 277
V F++++ C+ G L +H+ + K G+ ++ L + +MY
Sbjct: 387 VTFMSILKACSVHGALEQGRQIHAEISKVGFESDRSLQTAIFNMYAKCGSIYEAEQVFSK 446
Query: 278 -----------------KCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLF 320
KCGDL A +VF + ++V W MI GYAQ G ++ L
Sbjct: 447 MENKNVVAWASLLTMYIKCGDLTSAEKVFSEMSTRNVVSWNLMIAGYAQSGDIAKVFELL 506
Query: 321 KRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKC 380
+ +P+ T+ + L AC L +L +GK + V GLES+ V TSLI M+SKC
Sbjct: 507 SSMKVEGFQPDRVTIISILEACGALSALERGKLVHAEAVKLGLESDTVVATSLIGMYSKC 566
Query: 381 GRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSI 440
G + +A+ VF+++ ++D W+AM+ GY HG+G +A++LF +M E + P+ + +T++
Sbjct: 567 GEVTEARTVFDKISNRDTVAWNAMLAGYGQHGIGPEAVDLFKRMLK-ERVPPNEITFTAV 625
Query: 441 LSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEV 500
+SAC +G+V +G F+ MQ +F ++P +HY C+VDLLGRAGR A + I MP E
Sbjct: 626 ISACGRAGLVQEGREIFRIMQEDFRMKPGKQHYGCMVDLLGRAGRLQEAEEFIQRMPCEP 685
Query: 501 QAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARG 560
VW LL AC H NV+L E+AA ++L L P + Y+ ++N++ AG W ++ R
Sbjct: 686 DISVWHALLGACKSHDNVQLAEWAAHHILRLEPSNASVYVTLSNIYAQAGRWDDSTKVRK 745
Query: 561 LMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKELHIKLLEAGYIAEADI 620
+MDD+ L K+ G S +EIDG + FVA D +H I L+ L ++ EAGY +
Sbjct: 746 VMDDKGLKKDRGESSIEIDGRIHTFVAEDCAHPEIDSIHAELEMLTKEMKEAGYTPDMRF 805
Query: 621 V 621
V
Sbjct: 806 V 806
Score = 238 bits (607), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 153/547 (27%), Positives = 267/547 (48%), Gaps = 46/547 (8%)
Query: 9 GSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQ 68
G +E + + Q G+ NS T+ +++ CA + DGK VH + ++G D ++
Sbjct: 57 GRLKEAIQLLGIIKQRGLLVNSNTYGCIIEHCAKLRRFEDGKMVHKQLDELGLAIDIYLG 116
Query: 69 TGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLG 128
LI+ YSK D S +V M LR VV+W+S+I+A++ +A + M
Sbjct: 117 NSLINFYSKFGDVASVEQVFRRMT--LRDVVTWSSMIAAYAGNNHPAKAFDTFERMKDAN 174
Query: 129 LELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEA 184
+E + TF+S++ C+ + +H V G + ++ +A ++++MY+K G+++ A
Sbjct: 175 IEPNRITFLSILKACNNYSMLEKAREIHTVVKASG-METDVAVATALITMYSKCGEISLA 233
Query: 185 RSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQV 244
IF ++ E ++VSWT II +NEAF L +M + ++P+ V F++L+ C
Sbjct: 234 CEIFQKMKERNVVSWTAIIQANAQHRKLNEAFELYEKMLQAGISPNAVTFVSLLNSCNTP 293
Query: 245 GNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMI 304
L +HS + + G + + N L++MY KC ++ AR FD + ++ V W++MI
Sbjct: 294 EALNRGRRIHSHISERGLETDVVVANALITMYCKCNCIQDARETFDRMSKRDVISWSAMI 353
Query: 305 GGYAQLGYP-----SEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIV 359
GYAQ GY E L +R+ + V PN+ T + L AC+ G+L +G++I I
Sbjct: 354 AGYAQSGYQDKESLDEVFQLLERMRREGVFPNKVTFMSILKACSVHGALEQGRQIHAEIS 413
Query: 360 LNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSA---------------- 403
G ES+R +QT++ +M++KCG I +A++VF ++ +K++ W++
Sbjct: 414 KVGFESDRSLQTAIFNMYAKCGSIYEAEQVFSKMENKNVVAWASLLTMYIKCGDLTSAEK 473
Query: 404 ---------------MINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSG 448
MI GYA G + L M+ VEG +PD V SIL AC
Sbjct: 474 VFSEMSTRNVVSWNLMIAGYAQSGDIAKVFELLSSMK-VEGFQPDRVTIISILEACGALS 532
Query: 449 MVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPL 508
++ G + G+E L+ + + G A +T+ + W +
Sbjct: 533 ALERG-KLVHAEAVKLGLESDTVVATSLIGMYSKCGEVTEA-RTVFDKISNRDTVAWNAM 590
Query: 509 LSACMKH 515
L+ +H
Sbjct: 591 LAGYGQH 597
Score = 197 bits (502), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 122/426 (28%), Positives = 220/426 (51%), Gaps = 13/426 (3%)
Query: 116 EAILVLKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSV 171
EAI +L + GL ++++T+ ++ C+ F G +H + +LGL + I L NS+
Sbjct: 61 EAIQLLGIIKQRGLLVNSNTYGCIIEHCAKLRRFEDGKMVHKQLDELGLAID-IYLGNSL 119
Query: 172 MSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDL 231
++ Y+KFG V +F + +V+W+++I Y + +AF +M+ ++ P+
Sbjct: 120 INFYSKFGDVASVEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMKDANIEPNR 179
Query: 232 VVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDA 291
+ FL+++ C L A +H+++ SG + + L++MY+KCG++ LA +F
Sbjct: 180 ITFLSILKACNNYSMLEKAREIHTVVKASGMETDVAVATALITMYSKCGEISLACEIFQK 239
Query: 292 VLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKG 351
+ E++V WT++I AQ +EA L++++L+ + PN T + L++C +L++G
Sbjct: 240 MKERNVVSWTAIIQANAQHRKLNEAFELYEKMLQAGISPNAVTFVSLLNSCNTPEALNRG 299
Query: 352 KEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIH 411
+ I +I GLE++ V +LI M+ KC I A+E F+R+ +D+ WSAMI GYA
Sbjct: 300 RRIHSHISERGLETDVVVANALITMYCKCNCIQDARETFDRMSKRDVISWSAMIAGYAQS 359
Query: 412 GMG-----DQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGI 466
G D+ L +M+ EG+ P+ V + SIL ACS G ++ G + S G
Sbjct: 360 GYQDKESLDEVFQLLERMRR-EGVFPNKVTFMSILKACSVHGALEQGRQIHAEI-SKVGF 417
Query: 467 EPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAK 526
E + ++ + G A + +M + WA LL+ +K ++ E
Sbjct: 418 ESDRSLQTAIFNMYAKCGSIYEAEQVFSKMENK-NVVAWASLLTMYIKCGDLTSAEKVFS 476
Query: 527 NLLTLN 532
+ T N
Sbjct: 477 EMSTRN 482
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 78/274 (28%), Positives = 144/274 (52%), Gaps = 6/274 (2%)
Query: 201 TIIGGYV----NVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSL 256
++ GG V G + EA L +++ + + + +I CA++ +H
Sbjct: 44 SVSGGEVWRLCKAGRLKEAIQLLGIIKQRGLLVNSNTYGCIIEHCAKLRRFEDGKMVHKQ 103
Query: 257 LLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEA 316
L + G + L N L++ Y+K GD+ +VF + + V W+SMI YA +P++A
Sbjct: 104 LDELGLAIDIYLGNSLINFYSKFGDVASVEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKA 163
Query: 317 VNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHM 376
+ F+R+ ++ PN T + L AC L K +EI + +G+E++ V T+LI M
Sbjct: 164 FDTFERMKDANIEPNRITFLSILKACNNYSMLEKAREIHTVVKASGMETDVAVATALITM 223
Query: 377 FSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVV 436
+SKCG I+ A E+F+++ ++++ W+A+I A H ++A L+ KM G+ P+AV
Sbjct: 224 YSKCGEISLACEIFQKMKERNVVSWTAIIQANAQHRKLNEAFELYEKMLQA-GISPNAVT 282
Query: 437 YTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSI 470
+ S+L++C+ ++ G + S G+E +
Sbjct: 283 FVSLLNSCNTPEALNRGRRIHSHI-SERGLETDV 315
>gi|168044807|ref|XP_001774871.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673765|gb|EDQ60283.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 902
Score = 404 bits (1037), Expect = e-109, Method: Compositional matrix adjust.
Identities = 213/613 (34%), Positives = 351/613 (57%), Gaps = 8/613 (1%)
Query: 9 GSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQ 68
G E + M Q GV N T+ VL A ++ ++ GK VHS +L G + D V
Sbjct: 206 GRSETAFEIFQKMEQEGVVPNRITYISVLNAFSSPAALKWGKAVHSRILNAGHESDTAVG 265
Query: 69 TGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLG 128
T L+ MY+KC + R+V +++ R +++WN++I + +EA V +M G
Sbjct: 266 TALVKMYAKCGSYKDCRQVFEKLVNR--DLIAWNTMIGGLAEGGYWEEASEVYNQMQREG 323
Query: 129 LELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEA 184
+ + T+V +++ C + G +H V K G ++I + N+++SMY++ G + +A
Sbjct: 324 VMPNKITYVILLNACVNSAALHWGKEIHSRVAKAGF-TSDIGVQNALISMYSRCGSIKDA 382
Query: 185 RSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQV 244
R +FD++ ++SWT +IGG G EA + +M++ V P+ V + +++ C+
Sbjct: 383 RLVFDKMVRKDVISWTAMIGGLAKSGFGAEALTVYQEMQQAGVEPNRVTYTSILNACSSP 442
Query: 245 GNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMI 304
L +H ++++G + + N LV+MY+ CG ++ AR+VFD ++++ + + +MI
Sbjct: 443 AALEWGRRIHQQVVEAGLATDAHVGNTLVNMYSMCGSVKDARQVFDRMIQRDIVAYNAMI 502
Query: 305 GGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLE 364
GGYA EA+ LF RL + ++P++ T L+ACA GSL +EI + G
Sbjct: 503 GGYAAHNLGKEALKLFDRLQEEGLKPDKVTYINMLNACANSGSLEWAREIHTLVRKGGFF 562
Query: 365 SNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKM 424
S+ V +L+ ++KCG + A VFE++ +++ W+A+I G A HG G AL LF +M
Sbjct: 563 SDTSVGNALVSTYAKCGSFSDASIVFEKMTKRNVISWNAIIGGSAQHGRGQDALQLFERM 622
Query: 425 QHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAG 484
+ +EG+KPD V + S+LSACSH+G++++G +F SM +F I P+IEHY C+VDLLGRAG
Sbjct: 623 K-MEGVKPDIVTFVSLLSACSHAGLLEEGRRYFCSMSQDFAIIPTIEHYGCMVDLLGRAG 681
Query: 485 RFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMAN 544
+ D A I MP + ++W LL AC H NV + E AA++ L L+ + Y+ +++
Sbjct: 682 QLDEAEALIKTMPFQANTRIWGALLGACRIHGNVPVAERAAESSLKLDLDNAVVYVALSH 741
Query: 545 LFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKE 604
++ +AGMW AA R LM+ R +TKEPG S +++ + FVA DRSH S I L
Sbjct: 742 MYAAAGMWDSAAKLRKLMEQRGVTKEPGRSWIQVGDKLHYFVAEDRSHPQSEKIYAELDR 801
Query: 605 LHIKLLEAGYIAE 617
L + GY+ +
Sbjct: 802 LTHAMKMKGYVPD 814
Score = 274 bits (700), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 155/513 (30%), Positives = 276/513 (53%), Gaps = 21/513 (4%)
Query: 21 MLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSD 80
+ Q G NS + +LK C + + G++VH H+++ D + LI+MY +C
Sbjct: 14 LQQQGAQVNSSDYMKMLKRCIEVKDLVAGRQVHQHIIQHRTVPDQYTVNALINMYIQCGS 73
Query: 81 FVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVV 140
+R+V ++ R+V SWN+++ + + ++A+ +L++M GL +T +S +
Sbjct: 74 IEEARQVWKKLSYMERTVHSWNAMVVGYIQYGYIEKALKLLRQMQQHGLAPDRTTIMSFL 133
Query: 141 SGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSI 196
S C + G +H + GLL + + +AN +++MYAK G + EAR +FD++ + S+
Sbjct: 134 SSCKSPGALEWGREIHFQAMQAGLLFD-VKVANCILNMYAKCGSIEEAREVFDKMEKKSV 192
Query: 197 VSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSL 256
VSWT IGGY + G AF + +M + V P+ + +++++ + L ++HS
Sbjct: 193 VSWTITIGGYADCGRSETAFEIFQKMEQEGVVPNRITYISVLNAFSSPAALKWGKAVHSR 252
Query: 257 LLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEA 316
+L +G+ ++ + LV MY KCG + R+VF+ ++ + + W +MIGG A+ GY EA
Sbjct: 253 ILNAGHESDTAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGLAEGGYWEEA 312
Query: 317 VNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHM 376
++ ++ + V PN+ T L+AC +L GKEI + G S+ VQ +LI M
Sbjct: 313 SEVYNQMQREGVMPNKITYVILLNACVNSAALHWGKEIHSRVAKAGFTSDIGVQNALISM 372
Query: 377 FSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVV 436
+S+CG I A+ VF+++ KD+ W+AMI G A G G +AL ++ +MQ G++P+ V
Sbjct: 373 YSRCGSIKDARLVFDKMVRKDVISWTAMIGGLAKSGFGAEALTVYQEMQQA-GVEPNRVT 431
Query: 437 YTSILSACSHSGMVDDGLSFFKS-MQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHE 495
YTSIL+ACS ++ G + +++ + + + LV++ G
Sbjct: 432 YTSILNACSSPAALEWGRRIHQQVVEAGLATDAHVGN--TLVNMYSMCG----------- 478
Query: 496 MPVEVQAQVWAPLLSACMKHHNVELGEYAAKNL 528
V+ QV+ ++ + +N +G YAA NL
Sbjct: 479 -SVKDARQVFDRMIQRDIVAYNAMIGGYAAHNL 510
Score = 272 bits (696), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 141/455 (30%), Positives = 257/455 (56%), Gaps = 8/455 (1%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
M+ G E+ L M Q G+ + T L +C + ++ G+ +H ++ G
Sbjct: 97 MVVGYIQYGYIEKALKLLRQMQQHGLAPDRTTIMSFLSSCKSPGALEWGREIHFQAMQAG 156
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
D V +++MY+KC +R+V D+M +SVVSW I ++ ++ A +
Sbjct: 157 LLFDVKVANCILNMYAKCGSIEEAREVFDKM--EKKSVVSWTITIGGYADCGRSETAFEI 214
Query: 121 LKEMWVLGLELSASTFVSVV----SGCSFRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
++M G+ + T++SV+ S + + G ++H + G ++ + +++ MYA
Sbjct: 215 FQKMEQEGVVPNRITYISVLNAFSSPAALKWGKAVHSRILNAGH-ESDTAVGTALVKMYA 273
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K G + R +F+++ +++W T+IGG G EA + NQM+R V P+ + ++
Sbjct: 274 KCGSYKDCRQVFEKLVNRDLIAWNTMIGGLAEGGYWEEASEVYNQMQREGVMPNKITYVI 333
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
L+ C L +HS + K+G+ ++ + N L+SMY++CG ++ AR VFD ++ K
Sbjct: 334 LLNACVNSAALHWGKEIHSRVAKAGFTSDIGVQNALISMYSRCGSIKDARLVFDKMVRKD 393
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEE 356
V WT+MIGG A+ G+ +EA+ +++ + + V PN T + L+AC+ +L G+ I +
Sbjct: 394 VISWTAMIGGLAKSGFGAEALTVYQEMQQAGVEPNRVTYTSILNACSSPAALEWGRRIHQ 453
Query: 357 YIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQ 416
+V GL ++ V +L++M+S CG + A++VF+R+ +D+ ++AMI GYA H +G +
Sbjct: 454 QVVEAGLATDAHVGNTLVNMYSMCGSVKDARQVFDRMIQRDIVAYNAMIGGYAAHNLGKE 513
Query: 417 ALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVD 451
AL LF ++Q EGLKPD V Y ++L+AC++SG ++
Sbjct: 514 ALKLFDRLQE-EGLKPDKVTYINMLNACANSGSLE 547
Score = 235 bits (599), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 145/482 (30%), Positives = 253/482 (52%), Gaps = 26/482 (5%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI G +EE Y+ M + GV N T+ ++L AC N ++ GK +HS V K G
Sbjct: 299 MIGGLAEGGYWEEASEVYNQMQREGVMPNKITYVILLNACVNSAALHWGKEIHSRVAKAG 358
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F D VQ LI MYS+C +R V D+M VR + V+SW ++I +++ EA+ V
Sbjct: 359 FTSDIGVQNALISMYSRCGSIKDARLVFDKM-VR-KDVISWTAMIGGLAKSGFGAEALTV 416
Query: 121 LKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
+EM G+E + T+ S+++ CS G +H V + GL + + N++++MY+
Sbjct: 417 YQEMQQAGVEPNRVTYTSILNACSSPAALEWGRRIHQQVVEAGLATDA-HVGNTLVNMYS 475
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
G V +AR +FD + + IV++ +IGGY EA L ++++ + PD V ++N
Sbjct: 476 MCGSVKDARQVFDRMIQRDIVAYNAMIGGYAAHNLGKEALKLFDRLQEEGLKPDKVTYIN 535
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
++ CA G+L A +H+L+ K G+ ++ + N LVS Y KCG A VF+ + +++
Sbjct: 536 MLNACANSGSLEWAREIHTLVRKGGFFSDTSVGNALVSTYAKCGSFSDASIVFEKMTKRN 595
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEI-- 354
V W ++IGG AQ G +A+ LF+R+ V+P+ T + LSAC+ G L +G+
Sbjct: 596 VISWNAIIGGSAQHGRGQDALQLFERMKMEGVKPDIVTFVSLLSACSHAGLLEEGRRYFC 655
Query: 355 ---EEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVP-DKDLAVWSAMINGYAI 410
+++ ++ +E ++ + + G++++A+ + + +P + +W A++ I
Sbjct: 656 SMSQDFAIIPTIEH----YGCMVDLLGRAGQLDEAEALIKTMPFQANTRIWGALLGACRI 711
Query: 411 HG---MGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSM-QSNFGI 466
HG + ++A K+ +AVVY ++ + +GM D K M Q
Sbjct: 712 HGNVPVAERAAESSLKLD-----LDNAVVYVALSHMYAAAGMWDSAAKLRKLMEQRGVTK 766
Query: 467 EP 468
EP
Sbjct: 767 EP 768
Score = 185 bits (469), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 106/376 (28%), Positives = 198/376 (52%), Gaps = 7/376 (1%)
Query: 114 NDEAILVLKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGLLNNEIP---LANS 170
D A+ V++ + G ++++S ++ ++ C + + V++ + + +P N+
Sbjct: 4 KDGAVDVVQYLQQQGAQVNSSDYMKMLKRCIEVKDLVAGRQVHQHIIQHRTVPDQYTVNA 63
Query: 171 VMSMYAKFGKVNEARSIFDEIG--ETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVT 228
+++MY + G + EAR ++ ++ E ++ SW ++ GY+ G + +A L QM++ +
Sbjct: 64 LINMYIQCGSIEEARQVWKKLSYMERTVHSWNAMVVGYIQYGYIEKALKLLRQMQQHGLA 123
Query: 229 PDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRV 288
PD ++ + C G L +H +++G + + N +++MY KCG +E AR V
Sbjct: 124 PDRTTIMSFLSSCKSPGALEWGREIHFQAMQAGLLFDVKVANCILNMYAKCGSIEEAREV 183
Query: 289 FDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSL 348
FD + +KSV WT IGGYA G A +F+++ + V PN T + L+A + +L
Sbjct: 184 FDKMEKKSVVSWTITIGGYADCGRSETAFEIFQKMEQEGVVPNRITYISVLNAFSSPAAL 243
Query: 349 SKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGY 408
GK + I+ G ES+ V T+L+ M++KCG ++VFE++ ++DL W+ MI G
Sbjct: 244 KWGKAVHSRILNAGHESDTAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGL 303
Query: 409 AIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEP 468
A G ++A ++ +MQ EG+ P+ + Y +L+AC +S + G S + G
Sbjct: 304 AEGGYWEEASEVYNQMQR-EGVMPNKITYVILLNACVNSAALHWGKEIH-SRVAKAGFTS 361
Query: 469 SIEHYLCLVDLLGRAG 484
I L+ + R G
Sbjct: 362 DIGVQNALISMYSRCG 377
>gi|224126883|ref|XP_002319950.1| predicted protein [Populus trichocarpa]
gi|222858326|gb|EEE95873.1| predicted protein [Populus trichocarpa]
Length = 746
Score = 403 bits (1036), Expect = e-109, Method: Compositional matrix adjust.
Identities = 205/575 (35%), Positives = 345/575 (60%), Gaps = 9/575 (1%)
Query: 51 RVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSR 110
++++ +L G Q F+ L++ S + +RK+ D+ P V WN+I+ +SR
Sbjct: 93 QIYAKLLVTGLQYGGFLIAKLVNKASNIGEVSCARKLFDKFPDP--DVFLWNAIVRCYSR 150
Query: 111 ACLNDEAILVLKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIP 166
AI + M V + +F V+ CS G +H +++ G +++
Sbjct: 151 HGFFGHAIEMYARMQVACVSPDGFSFPCVLKACSALPALEMGRRVHGQIFRHGF-ESDVF 209
Query: 167 LANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMS 226
+ N ++++YAK G++ A ++F + + +IVSWT+II GY G EA + ++MR+ +
Sbjct: 210 VQNGLVALYAKCGEIVRANAVFGRLVDRTIVSWTSIISGYAQNGQPIEALRIFSEMRKTN 269
Query: 227 VTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELAR 286
V PD + ++++ V +L S+H ++K G E L L S+Y KCG + +AR
Sbjct: 270 VRPDWIALVSVLRAYTDVEDLEHGKSIHGCVIKMGLECEFDLLISLTSLYAKCGHVMVAR 329
Query: 287 RVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELG 346
F+ V S+ W +MI GY + GY EA+ LF+ + ++RP+ T+ ++++ACA++G
Sbjct: 330 LFFNQVENPSLIFWNAMISGYVKNGYAEEAIELFRLMKSKNIRPDSITVTSSIAACAQIG 389
Query: 347 SLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMIN 406
SL + ++EYI ++ ++ V TSLI ++KCG ++ A+ VF+R+PDKD+ VWSAM+
Sbjct: 390 SLELARWMDEYISMSEFRNDVIVNTSLIDTYAKCGSVDMARFVFDRIPDKDVVVWSAMMV 449
Query: 407 GYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGI 466
GY +HG G +++ LF+ M+ G+ P+ V + +L+AC +SG+V++G F M+ ++GI
Sbjct: 450 GYGLHGQGRESIILFHAMRQA-GVSPNDVTFVGLLTACKNSGLVEEGWDLFHRMR-DYGI 507
Query: 467 EPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAK 526
EP +HY C+VDLLGRAG D A + MP+E VW LLSAC H +V LGEYAA+
Sbjct: 508 EPRHQHYACVVDLLGRAGHLDRAYNFVMNMPIEPGVSVWGALLSACKIHRHVTLGEYAAE 567
Query: 527 NLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFV 586
L +L+P +TG+Y+ ++NL+ S+ +W A R LM ++ LTK G+S +EI+G +Q F
Sbjct: 568 RLFSLDPYNTGHYVQLSNLYASSCLWDCVAKVRVLMREKGLTKHLGYSVIEINGKLQAFQ 627
Query: 587 AGDRSHHLSVDIRKTLKELHIKLLEAGYIAEADIV 621
AGD++H S +I + +++L +L EAG++ + V
Sbjct: 628 AGDKTHPRSKEIFEEVEDLERRLKEAGFVPHTESV 662
Score = 231 bits (589), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 130/416 (31%), Positives = 220/416 (52%), Gaps = 8/416 (1%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
++R + +G F + Y+ M V + F+FP VLKAC+ + ++ G+RVH + + G
Sbjct: 144 IVRCYSRHGFFGHAIEMYARMQVACVSPDGFSFPCVLKACSALPALEMGRRVHGQIFRHG 203
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F+ D FVQ GL+ +Y+KC + V + V + R++VSW SIIS +++ EA+ +
Sbjct: 204 FESDVFVQNGLVALYAKCGEIVRANAVFGRLVD--RTIVSWTSIISGYAQNGQPIEALRI 261
Query: 121 LKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
EM + VSV+ + G S+H CV K+G L E L S+ S+YA
Sbjct: 262 FSEMRKTNVRPDWIALVSVLRAYTDVEDLEHGKSIHGCVIKMG-LECEFDLLISLTSLYA 320
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K G V AR F+++ S++ W +I GYV G EA L M+ ++ PD + +
Sbjct: 321 KCGHVMVARLFFNQVENPSLIFWNAMISGYVKNGYAEEAIELFRLMKSKNIRPDSITVTS 380
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
I CAQ+G+L LA M + S + N+ ++ L+ Y KCG +++AR VFD + +K
Sbjct: 381 SIAACAQIGSLELARWMDEYISMSEFRNDVIVNTSLIDTYAKCGSVDMARFVFDRIPDKD 440
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEE 356
V +W++M+ GY G E++ LF + + V PN+ T L+AC G + +G ++
Sbjct: 441 VVVWSAMMVGYGLHGQGRESIILFHAMRQAGVSPNDVTFVGLLTACKNSGLVEEGWDLFH 500
Query: 357 YIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVP-DKDLAVWSAMINGYAIH 411
+ G+E Q ++ + + G +++A +P + ++VW A+++ IH
Sbjct: 501 RMRDYGIEPRHQHYACVVDLLGRAGHLDRAYNFVMNMPIEPGVSVWGALLSACKIH 556
>gi|356564895|ref|XP_003550682.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g30700-like [Glycine max]
Length = 778
Score = 403 bits (1036), Expect = e-109, Method: Compositional matrix adjust.
Identities = 220/612 (35%), Positives = 356/612 (58%), Gaps = 18/612 (2%)
Query: 14 TLSTYSSMLQ-TGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLI 72
++S Y+ +L+ T + ++FT+ + A + N G +H+H + GF + FV + L+
Sbjct: 89 SISFYTHLLKNTTLSPDNFTYAFAISASPDDNL---GMCLHAHAVVDGFDSNLFVASALV 145
Query: 73 DMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELS 132
D+Y K S +RKV D+MP R V WN++I+ R C D+++ V K+M G+ L
Sbjct: 146 DLYCKFSRVAYARKVFDKMPDR--DTVLWNTMITGLVRNCCYDDSVQVFKDMVAQGVRLD 203
Query: 133 ASTFVSVVSGCSFRQ----GISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIF 188
++T +V+ + Q G+ + C KLG ++ L ++S+++K V+ AR +F
Sbjct: 204 STTVATVLPAVAEMQEVKVGMGIQCLALKLGFHFDDYVL-TGLISVFSKCEDVDTARLLF 262
Query: 189 DEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLV---VFLNLILGCAQVG 245
I + +VS+ +I G+ G A R + V+ V + LI + G
Sbjct: 263 GMIRKPDLVSYNALISGFSCNGETECAV---KYFRELLVSGQRVSSSTMVGLIPVSSPFG 319
Query: 246 NLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIG 305
+L LA + +KSG + + L ++Y++ +++LAR++FD EK+V W +MI
Sbjct: 320 HLHLACCIQGFCVKSGTILQPSVSTALTTIYSRLNEIDLARQLFDESSEKTVAAWNAMIS 379
Query: 306 GYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLES 365
GYAQ G A++LF+ ++ T PN T+ + LSACA+LG+LS GK + + I LE
Sbjct: 380 GYAQSGLTEMAISLFQEMMTTEFTPNPVTITSILSACAQLGALSFGKSVHQLIKSKNLEQ 439
Query: 366 NRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQ 425
N V T+LI M++KCG I++A ++F+ +K+ W+ MI GY +HG GD+AL LF +M
Sbjct: 440 NIYVSTALIDMYAKCGNISEASQLFDLTSEKNTVTWNTMIFGYGLHGYGDEALKLFNEML 499
Query: 426 HVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGR 485
H+ G +P +V + S+L ACSH+G+V +G F +M + + IEP EHY C+VD+LGRAG+
Sbjct: 500 HL-GFQPSSVTFLSVLYACSHAGLVREGDEIFHAMVNKYRIEPLAEHYACMVDILGRAGQ 558
Query: 486 FDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANL 545
+ AL+ I +MPVE VW LL ACM H + L A++ L L+PG+ G Y+L++N+
Sbjct: 559 LEKALEFIRKMPVEPGPAVWGTLLGACMIHKDTNLARVASERLFELDPGNVGYYVLLSNI 618
Query: 546 FTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKEL 605
++ + +AA+ R + R L+K PG + +E++G+ VFV GDRSH + I L+EL
Sbjct: 619 YSVERNFPKAASVREAVKKRNLSKTPGCTLIEVNGTPHVFVCGDRSHSQTTSIYAKLEEL 678
Query: 606 HIKLLEAGYIAE 617
K+ E GY +E
Sbjct: 679 TGKMREMGYQSE 690
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 119/416 (28%), Positives = 209/416 (50%), Gaps = 7/416 (1%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI N +++++ + M+ GV +S T VL A A + + G + LK+G
Sbjct: 175 MITGLVRNCCYDDSVQVFKDMVAQGVRLDSTTVATVLPAVAEMQEVKVGMGIQCLALKLG 234
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F D +V TGLI ++SKC D V + ++L M +R +VS+N++IS S + A+
Sbjct: 235 FHFDDYVLTGLISVFSKCED-VDTARLLFGM-IRKPDLVSYNALISGFSCNGETECAVKY 292
Query: 121 LKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGLLNNEI---PLANSVMSMYAK 177
+E+ V G +S+ST V ++ S + + CC+ + + I ++ ++ ++Y++
Sbjct: 293 FRELLVSGQRVSSSTMVGLIPVSSPFGHLHLACCIQGFCVKSGTILQPSVSTALTTIYSR 352
Query: 178 FGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNL 237
+++ AR +FDE E ++ +W +I GY G A L +M TP+ V ++
Sbjct: 353 LNEIDLARQLFDESSEKTVAAWNAMISGYAQSGLTEMAISLFQEMMTTEFTPNPVTITSI 412
Query: 238 ILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSV 297
+ CAQ+G L S+H L+ + L+ MY KCG++ A ++FD EK+
Sbjct: 413 LSACAQLGALSFGKSVHQLIKSKNLEQNIYVSTALIDMYAKCGNISEASQLFDLTSEKNT 472
Query: 298 FLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEY 357
W +MI GY GY EA+ LF +L +P+ T + L AC+ G + +G EI
Sbjct: 473 VTWNTMIFGYGLHGYGDEALKLFNEMLHLGFQPSSVTFLSVLYACSHAGLVREGDEIFHA 532
Query: 358 IVLN-GLESNRQVQTSLIHMFSKCGRINKAKEVFERVP-DKDLAVWSAMINGYAIH 411
+V +E + ++ + + G++ KA E ++P + AVW ++ IH
Sbjct: 533 MVNKYRIEPLAEHYACMVDILGRAGQLEKALEFIRKMPVEPGPAVWGTLLGACMIH 588
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 107/202 (52%), Gaps = 6/202 (2%)
Query: 254 HSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYP 313
H+ L+++GY ++ L G AR +F +V + +FL+ +I G++
Sbjct: 28 HAQLIRNGYQHDLATVTKLTQKLFDVGATRHARALFFSVPKPDIFLFNVLIKGFS-FSPD 86
Query: 314 SEAVNLFKRLLK-TSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTS 372
+ +++ + LLK T++ P+ T A +SA + + G + + V++G +SN V ++
Sbjct: 87 ASSISFYTHLLKNTTLSPDNFTYAFAISASPD---DNLGMCLHAHAVVDGFDSNLFVASA 143
Query: 373 LIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKP 432
L+ ++ K R+ A++VF+++PD+D +W+ MI G + D ++ +F M +G++
Sbjct: 144 LVDLYCKFSRVAYARKVFDKMPDRDTVLWNTMITGLVRNCCYDDSVQVFKDMV-AQGVRL 202
Query: 433 DAVVYTSILSACSHSGMVDDGL 454
D+ ++L A + V G+
Sbjct: 203 DSTTVATVLPAVAEMQEVKVGM 224
>gi|147819295|emb|CAN68962.1| hypothetical protein VITISV_019277 [Vitis vinifera]
Length = 676
Score = 403 bits (1036), Expect = e-109, Method: Compositional matrix adjust.
Identities = 217/584 (37%), Positives = 343/584 (58%), Gaps = 9/584 (1%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVH-GNSFTFPLVLKACANINSIWDGKRVHSHVLKV 59
MIR TN+G + L + ML +G +++T+P V+KAC + G +H+ +
Sbjct: 93 MIRMYTNSGLSYDALGLFVQMLASGRRWPDNYTYPFVIKACGDYLLPEMGALIHARTVMS 152
Query: 60 GFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAIL 119
GF DAFVQ L+ MY C + +R+V D M R R++VSWN++I+ + + EA++
Sbjct: 153 GFDSDAFVQNSLMAMYMNCGEMEVARRVFDLM--RERTLVSWNTMINGYFKNGCVKEALM 210
Query: 120 VLKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGLLNN---EIPLANSVMSMYA 176
V M G+E +T VSV+ CS+ + + + V+ L + N +I + NS++ MYA
Sbjct: 211 VFDWMIGKGIEPDCATVVSVLPVCSYLKELEVGRRVHALVEVKNLGEDISVWNSLLDMYA 270
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K G ++EA+ IF E+ + +VSWTT++ GY+ G+ A LC M+ SV P+ V +
Sbjct: 271 KCGNMDEAQMIFYEMDKRDVVSWTTMMNGYILNGDARSALLLCQMMQFESVKPNFVTLAS 330
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
++ CA + +L +H ++ +E ++ L+ MY KC ++ L+ RVF ++
Sbjct: 331 VLSACASLYSLKHGRCLHGWAIRQKLESEVIVETALIDMYAKCNNVNLSFRVFSKXSKQR 390
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEE 356
W ++I G G +A+ LFK++L +V PN+ATL + L A A L L + + +
Sbjct: 391 TAPWNAIISGCIHNGLSRKAIELFKQMLMEAVDPNDATLNSLLPAYAFLTDLQQARNMHG 450
Query: 357 YIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVP--DKDLAVWSAMINGYAIHGMG 414
Y++ +G S +V T LI ++SKCG + A +F +P DKD+ WSA+I GY +HG G
Sbjct: 451 YLIRSGFLSRIEVATILIDIYSKCGSLESAHNIFNGIPKKDKDIITWSAIIAGYGMHGHG 510
Query: 415 DQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYL 474
+ A++LF +M G+KP+ + +TSIL ACSH+G+VD+GL FK M + + +HY
Sbjct: 511 ETAISLFDQMVQ-SGVKPNEITFTSILHACSHAGLVDEGLGLFKFMLEDNQMSLRTDHYT 569
Query: 475 CLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPG 534
C++DLLGRAGR + A + I M VW LL +C+ H NVELGE AAK L L PG
Sbjct: 570 CVIDLLGRAGRLEEAYELIRTMAFRPNHAVWGALLGSCVIHENVELGEVAAKWLFELEPG 629
Query: 535 STGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEI 578
+TGNY+L+AN++++ G W++A R +M++ L K P S +E+
Sbjct: 630 NTGNYVLLANIYSAVGRWRDAEHVRLMMNNIGLRKTPAHSLIEV 673
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 133/473 (28%), Positives = 242/473 (51%), Gaps = 19/473 (4%)
Query: 36 VLKACANINSIWDGKRVHSHVLKVGFQQDAFVQ---TGLIDMYSKCSDFVSSRKVLDEMP 92
+L+ C + SI + K++H+H + +G + + L Y+ C +RK+ DE+
Sbjct: 24 LLQRCTSRKSIPNTKQIHAHTITLGLLSSPYSHHLLSSLAAAYAMCGCAPHARKLFDEL- 82
Query: 93 VRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSAS-TFVSVVSGCS----FRQ 147
R S+ SWN++I ++ + L+ +A+ + +M G + T+ V+ C
Sbjct: 83 -RNPSLFSWNAMIRMYTNSGLSYDALGLFVQMLASGRRWPDNYTYPFVIKACGDYLLPEM 141
Query: 148 GISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYV 207
G +H G +++ + NS+M+MY G++ AR +FD + E ++VSW T+I GY
Sbjct: 142 GALIHARTVMSGF-DSDAFVQNSLMAMYMNCGEMEVARRVFDLMRERTLVSWNTMINGYF 200
Query: 208 NVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDP 267
G V EA + + M + PD ++++ C+ + L + +H+L+ +
Sbjct: 201 KNGCVKEALMVFDWMIGKGIEPDCATVVSVLPVCSYLKELEVGRRVHALVEVKNLGEDIS 260
Query: 268 LDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTS 327
+ N L+ MY KCG+++ A+ +F + ++ V WT+M+ GY G A+ L + + S
Sbjct: 261 VWNSLLDMYAKCGNMDEAQMIFYEMDKRDVVSWTTMMNGYILNGDARSALLLCQMMQFES 320
Query: 328 VRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAK 387
V+PN TLA+ LSACA L SL G+ + + + LES V+T+LI M++KC +N +
Sbjct: 321 VKPNFVTLASVLSACASLYSLKHGRCLHGWAIRQKLESEVIVETALIDMYAKCNNVNLSF 380
Query: 388 EVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHS 447
VF + + A W+A+I+G +G+ +A+ LF +M +E + P+ S+L A ++
Sbjct: 381 RVFSKXSKQRTAPWNAIISGCIHNGLSRKAIELFKQML-MEAVDPNDATLNSLLPA--YA 437
Query: 448 GMVDDGLSFFKSMQSNF---GIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMP 497
+ D L ++M G IE L+D+ + G + A + +P
Sbjct: 438 FLTD--LQQARNMHGYLIRSGFLSRIEVATILIDIYSKCGSLESAHNIFNGIP 488
>gi|449491114|ref|XP_004158804.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g15510, chloroplastic-like [Cucumis sativus]
Length = 878
Score = 402 bits (1034), Expect = e-109, Method: Compositional matrix adjust.
Identities = 221/610 (36%), Positives = 340/610 (55%), Gaps = 10/610 (1%)
Query: 9 GSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQ 68
G F+E L+ Y ML + N +TFP VLK CA ++ I GK +H+HV++ GF+ D V
Sbjct: 177 GCFDEALNLYHRMLWAEIRPNVYTFPSVLKTCAGVSDIARGKEIHAHVIRFGFESDVDVG 236
Query: 69 TGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLG 128
LI MY KC D ++R + D+MP R R +SWN++IS + E + + M L
Sbjct: 237 NALITMYVKCGDISNARMLFDKMPKRDR--ISWNAMISGYFENGGGLEGLELFSMMRELS 294
Query: 129 LELSASTFVSVVSGCSF----RQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEA 184
++ T +V S C R G +H V K +I + NS++ MY+ G++ EA
Sbjct: 295 VDPDLITMTTVASACELLDNERLGRGVHGYVVK-SEFGGDISMNNSLIQMYSSLGRLEEA 353
Query: 185 RSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQV 244
++F + +VSWT +I V+ +A M + PD + ++++ CA +
Sbjct: 354 ETVFSRMESKDVVSWTAMIASLVSHKLPFKAVETYKMMELEGILPDEITLVSVLSACACI 413
Query: 245 GNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMI 304
G+L L + +H + +K+G + + N L+ MY+KC ++ A VF + K+V WTS+I
Sbjct: 414 GHLDLGIRLHEIAIKTGLVSHVIVSNSLIDMYSKCKCVDNALEVFRNISGKNVVSWTSLI 473
Query: 305 GGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLE 364
G EA+ LF R +K S++PN TL + LSACA +G+L +GKEI + + G+
Sbjct: 474 LGLRINNRSFEAL-LFFRQMKESMKPNSVTLISVLSACARIGALMRGKEIHAHALRTGVG 532
Query: 365 SNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKM 424
+ + +++ M+ +CGR A F KD+ W+ ++ GYA G A+ LF KM
Sbjct: 533 FDGFLPNAILDMYVRCGRKVPALNQFNS-QKKDVTAWNILLTGYAQQGQAKLAVELFDKM 591
Query: 425 QHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAG 484
+E + PD + + S+L ACS SGMV +GL +F M++ + + P+++HY C+VD+LGRAG
Sbjct: 592 LELE-IHPDEITFISLLCACSKSGMVTEGLEYFNIMKNKYNLTPNLKHYACVVDILGRAG 650
Query: 485 RFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMAN 544
+ D A I +MP+ A +W LL+AC H NVELGE AAK + + S G YIL+ N
Sbjct: 651 QLDDAYDFIQDMPIRPDAAIWGALLNACRIHRNVELGEIAAKRVFEKDNKSVGYYILLCN 710
Query: 545 LFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKE 604
L+ G W + + R LM +R L+ +PG S VEI G V F++GD SH S +I L
Sbjct: 711 LYAGCGNWDKVSKVRSLMRERGLSADPGCSWVEIKGKVHAFLSGDNSHSQSKEINGVLDG 770
Query: 605 LHIKLLEAGY 614
K+ E G+
Sbjct: 771 FCSKMKENGF 780
Score = 213 bits (543), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 145/518 (27%), Positives = 254/518 (49%), Gaps = 14/518 (2%)
Query: 9 GSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQ 68
G+ E+ + SML+ + + +L+ C + +G RV+ V +
Sbjct: 76 GNLEQAMKRLESMLELRIEVEEDAYIALLRLCEWRRAPDEGSRVYELVSSSKSCLCVRLG 135
Query: 69 TGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLG 128
L+ M+ + + + + V +M R V SWN ++ +++A DEA+ + M
Sbjct: 136 NALLSMFVRFGNLLDAWYVFGKMSER--DVFSWNVLVGGYAKAGCFDEALNLYHRMLWAE 193
Query: 129 LELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEA 184
+ + TF SV+ C+ +G +H V + G +++ + N++++MY K G ++ A
Sbjct: 194 IRPNVYTFPSVLKTCAGVSDIARGKEIHAHVIRFG-FESDVDVGNALITMYVKCGDISNA 252
Query: 185 RSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQV 244
R +FD++ + +SW +I GY G E L + MR +SV PDL+ + C +
Sbjct: 253 RMLFDKMPKRDRISWNAMISGYFENGGGLEGLELFSMMRELSVDPDLITMTTVASACELL 312
Query: 245 GNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMI 304
N L +H ++KS + + ++N L+ MY+ G LE A VF + K V WT+MI
Sbjct: 313 DNERLGRGVHGYVVKSEFGGDISMNNSLIQMYSSLGRLEEAETVFSRMESKDVVSWTAMI 372
Query: 305 GGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLE 364
P +AV +K + + P+E TL + LSACA +G L G + E + GL
Sbjct: 373 ASLVSHKLPFKAVETYKMMELEGILPDEITLVSVLSACACIGHLDLGIRLHEIAIKTGLV 432
Query: 365 SNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKM 424
S+ V SLI M+SKC ++ A EVF + K++ W+++I G I+ +AL F +M
Sbjct: 433 SHVIVSNSLIDMYSKCKCVDNALEVFRNISGKNVVSWTSLILGLRINNRSFEALLFFRQM 492
Query: 425 QHVEGLKPDAVVYTSILSACSHSGMVDDGLSFF-KSMQSNFGIEPSIEHYLCLVDLLGRA 483
+ E +KP++V S+LSAC+ G + G ++++ G + + + ++D+ R
Sbjct: 493 K--ESMKPNSVTLISVLSACARIGALMRGKEIHAHALRTGVGFDGFLPN--AILDMYVRC 548
Query: 484 GRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELG 521
GR AL + +V A W LL+ + +L
Sbjct: 549 GRKVPALNQFNSQKKDVTA--WNILLTGYAQQGQAKLA 584
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 121/419 (28%), Positives = 210/419 (50%), Gaps = 15/419 (3%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI NG E L +S M + V + T V AC +++ G+ VH +V+K
Sbjct: 270 MISGYFENGGGLEGLELFSMMRELSVDPDLITMTTVASACELLDNERLGRGVHGYVVKSE 329
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F D + LI MYS + V M + VVSW ++I++ L +A+
Sbjct: 330 FGGDISMNNSLIQMYSSLGRLEEAETVFSRMES--KDVVSWTAMIASLVSHKLPFKAVET 387
Query: 121 LKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
K M + G+ T VSV+S C+ GI +H K GL+++ I ++NS++ MY+
Sbjct: 388 YKMMELEGILPDEITLVSVLSACACIGHLDLGIRLHEIAIKTGLVSHVI-VSNSLIDMYS 446
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K V+ A +F I ++VSWT++I G EA QM+ S+ P+ V ++
Sbjct: 447 KCKCVDNALEVFRNISGKNVVSWTSLILGLRINNRSFEALLFFRQMKE-SMKPNSVTLIS 505
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
++ CA++G L +H+ L++G + L N ++ MY +CG A F++ +K
Sbjct: 506 VLSACARIGALMRGKEIHAHALRTGVGFDGFLPNAILDMYVRCGRKVPALNQFNS-QKKD 564
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEE 356
V W ++ GYAQ G AV LF ++L+ + P+E T + L AC++ G +++G +E
Sbjct: 565 VTAWNILLTGYAQQGQAKLAVELFDKMLELEIHPDEITFISLLCACSKSGMVTEG--LEY 622
Query: 357 YIVLN---GLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDK-DLAVWSAMINGYAIH 411
+ ++ L N + ++ + + G+++ A + + +P + D A+W A++N IH
Sbjct: 623 FNIMKNKYNLTPNLKHYACVVDILGRAGQLDDAYDFIQDMPIRPDAAIWGALLNACRIH 681
>gi|449436591|ref|XP_004136076.1| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
chloroplastic-like [Cucumis sativus]
Length = 878
Score = 402 bits (1034), Expect = e-109, Method: Compositional matrix adjust.
Identities = 221/610 (36%), Positives = 340/610 (55%), Gaps = 10/610 (1%)
Query: 9 GSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQ 68
G F+E L+ Y ML + N +TFP VLK CA ++ I GK +H+HV++ GF+ D V
Sbjct: 177 GCFDEALNLYHRMLWAEIRPNVYTFPSVLKTCAGVSDIARGKEIHAHVIRFGFESDVDVG 236
Query: 69 TGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLG 128
LI MY KC D ++R + D+MP R R +SWN++IS + E + + M L
Sbjct: 237 NALITMYVKCGDISNARMLFDKMPKRDR--ISWNAMISGYFENGGGLEGLELFSMMRELS 294
Query: 129 LELSASTFVSVVSGCSF----RQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEA 184
++ T +V S C R G +H V K +I + NS++ MY+ G++ EA
Sbjct: 295 VDPDLITMTTVASACELLDNERLGRGVHGYVVK-SEFGGDISMNNSLIQMYSSLGRLEEA 353
Query: 185 RSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQV 244
++F + +VSWT +I V+ +A M + PD + ++++ CA +
Sbjct: 354 ETVFSRMESKDVVSWTAMIASLVSHKLPFKAVETYKMMELEGILPDEITLVSVLSACACI 413
Query: 245 GNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMI 304
G+L L + +H + +K+G + + N L+ MY+KC ++ A VF + K+V WTS+I
Sbjct: 414 GHLDLGIRLHEIAIKTGLVSHVIVSNSLIDMYSKCKCVDNALEVFRNISGKNVVSWTSLI 473
Query: 305 GGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLE 364
G EA+ LF R +K S++PN TL + LSACA +G+L +GKEI + + G+
Sbjct: 474 LGLRINNRSFEAL-LFFRQMKESMKPNSVTLISVLSACARIGALMRGKEIHAHALRTGVG 532
Query: 365 SNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKM 424
+ + +++ M+ +CGR A F KD+ W+ ++ GYA G A+ LF KM
Sbjct: 533 FDGFLPNAILDMYVRCGRKVPALNQFNS-QKKDVTAWNILLTGYAQQGQAKLAVELFDKM 591
Query: 425 QHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAG 484
+E + PD + + S+L ACS SGMV +GL +F M++ + + P+++HY C+VD+LGRAG
Sbjct: 592 LELE-IHPDEITFISLLCACSKSGMVTEGLEYFNIMKNKYNLTPNLKHYACVVDILGRAG 650
Query: 485 RFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMAN 544
+ D A I +MP+ A +W LL+AC H NVELGE AAK + + S G YIL+ N
Sbjct: 651 QLDDAYDFIQDMPIRPDAAIWGALLNACRIHRNVELGEIAAKRVFEKDNKSVGYYILLCN 710
Query: 545 LFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKE 604
L+ G W + + R LM +R L+ +PG S VEI G V F++GD SH S +I L
Sbjct: 711 LYAGCGNWDKVSKVRSLMRERGLSADPGCSWVEIKGKVHAFLSGDNSHSQSKEINGVLDG 770
Query: 605 LHIKLLEAGY 614
K+ E G+
Sbjct: 771 FCSKMKENGF 780
Score = 213 bits (543), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 145/518 (27%), Positives = 254/518 (49%), Gaps = 14/518 (2%)
Query: 9 GSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQ 68
G+ E+ + SML+ + + +L+ C + +G RV+ V +
Sbjct: 76 GNLEQAMKRLESMLELRIEVEEDAYIALLRLCEWRRAPDEGSRVYELVSSSKSCLCVRLG 135
Query: 69 TGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLG 128
L+ M+ + + + + V +M R V SWN ++ +++A DEA+ + M
Sbjct: 136 NALLSMFVRFGNLLDAWYVFGKMSER--DVFSWNVLVGGYAKAGCFDEALNLYHRMLWAE 193
Query: 129 LELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEA 184
+ + TF SV+ C+ +G +H V + G +++ + N++++MY K G ++ A
Sbjct: 194 IRPNVYTFPSVLKTCAGVSDIARGKEIHAHVIRFG-FESDVDVGNALITMYVKCGDISNA 252
Query: 185 RSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQV 244
R +FD++ + +SW +I GY G E L + MR +SV PDL+ + C +
Sbjct: 253 RMLFDKMPKRDRISWNAMISGYFENGGGLEGLELFSMMRELSVDPDLITMTTVASACELL 312
Query: 245 GNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMI 304
N L +H ++KS + + ++N L+ MY+ G LE A VF + K V WT+MI
Sbjct: 313 DNERLGRGVHGYVVKSEFGGDISMNNSLIQMYSSLGRLEEAETVFSRMESKDVVSWTAMI 372
Query: 305 GGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLE 364
P +AV +K + + P+E TL + LSACA +G L G + E + GL
Sbjct: 373 ASLVSHKLPFKAVETYKMMELEGILPDEITLVSVLSACACIGHLDLGIRLHEIAIKTGLV 432
Query: 365 SNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKM 424
S+ V SLI M+SKC ++ A EVF + K++ W+++I G I+ +AL F +M
Sbjct: 433 SHVIVSNSLIDMYSKCKCVDNALEVFRNISGKNVVSWTSLILGLRINNRSFEALLFFRQM 492
Query: 425 QHVEGLKPDAVVYTSILSACSHSGMVDDGLSFF-KSMQSNFGIEPSIEHYLCLVDLLGRA 483
+ E +KP++V S+LSAC+ G + G ++++ G + + + ++D+ R
Sbjct: 493 K--ESMKPNSVTLISVLSACARIGALMRGKEIHAHALRTGVGFDGFLPN--AILDMYVRC 548
Query: 484 GRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELG 521
GR AL + +V A W LL+ + +L
Sbjct: 549 GRKVPALNQFNSQKKDVTA--WNILLTGYAQQGQAKLA 584
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 121/419 (28%), Positives = 210/419 (50%), Gaps = 15/419 (3%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI NG E L +S M + V + T V AC +++ G+ VH +V+K
Sbjct: 270 MISGYFENGGGLEGLELFSMMRELSVDPDLITMTTVASACELLDNERLGRGVHGYVVKSE 329
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F D + LI MYS + V M + VVSW ++I++ L +A+
Sbjct: 330 FGGDISMNNSLIQMYSSLGRLEEAETVFSRMES--KDVVSWTAMIASLVSHKLPFKAVET 387
Query: 121 LKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
K M + G+ T VSV+S C+ GI +H K GL+++ I ++NS++ MY+
Sbjct: 388 YKMMELEGILPDEITLVSVLSACACIGHLDLGIRLHEIAIKTGLVSHVI-VSNSLIDMYS 446
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K V+ A +F I ++VSWT++I G EA QM+ S+ P+ V ++
Sbjct: 447 KCKCVDNALEVFRNISGKNVVSWTSLILGLRINNRSFEALLFFRQMKE-SMKPNSVTLIS 505
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
++ CA++G L +H+ L++G + L N ++ MY +CG A F++ +K
Sbjct: 506 VLSACARIGALMRGKEIHAHALRTGVGFDGFLPNAILDMYVRCGRKVPALNQFNS-QKKD 564
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEE 356
V W ++ GYAQ G AV LF ++L+ + P+E T + L AC++ G +++G +E
Sbjct: 565 VTAWNILLTGYAQQGQAKLAVELFDKMLELEIHPDEITFISLLCACSKSGMVTEG--LEY 622
Query: 357 YIVLN---GLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDK-DLAVWSAMINGYAIH 411
+ ++ L N + ++ + + G+++ A + + +P + D A+W A++N IH
Sbjct: 623 FNIMKNKYNLTPNLKHYACVVDILGRAGQLDDAYDFIQDMPIRPDAAIWGALLNACRIH 681
>gi|357468777|ref|XP_003604673.1| hypothetical protein MTR_4g015760 [Medicago truncatula]
gi|355505728|gb|AES86870.1| hypothetical protein MTR_4g015760 [Medicago truncatula]
Length = 838
Score = 402 bits (1034), Expect = e-109, Method: Compositional matrix adjust.
Identities = 217/631 (34%), Positives = 354/631 (56%), Gaps = 15/631 (2%)
Query: 1 MIRNSTNNGSFEETLSTYSSM-----LQTGVHGNSFTFPLVLKACANINSIWDGKRVHSH 55
++R+ G + ETLS + M + ++++ + LK+CA + + GK +H
Sbjct: 208 LLRSYCFEGEWVETLSLFRQMNNVSSVSIEERPDNYSVSIALKSCAGLRKLLLGKVIHGF 267
Query: 56 VLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLND 115
+ KV D FV + LID+Y+KC + KV E P VV W SIIS + ++ +
Sbjct: 268 LKKVRIDGDMFVGSALIDLYTKCGQMNDAVKVFMEYPKP--DVVLWTSIISGYEQSGSPE 325
Query: 116 EAILVLKEMWVLGLELSAS--TFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLAN 169
A+ M V+ ++S T VSV S C+ F+ G S+H V + GL +N++ LAN
Sbjct: 326 LALAFFSRM-VVSEKVSPDPVTLVSVASACAQLSNFKLGRSVHGFVKRKGL-DNKLCLAN 383
Query: 170 SVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTP 229
S++ +Y K G + A ++F E+ + I+SW+T++ Y + G + L N+M + P
Sbjct: 384 SLLHLYGKTGSIKNASNLFREMSDKDIISWSTMVACYADNGAETDVLDLFNEMLDKRIKP 443
Query: 230 DLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVF 289
+ V ++++ CA + NL + +H L + G+ E + L+ MY KC E A +F
Sbjct: 444 NWVTVVSVLRACACISNLEEGMKIHELAVNYGFEMETTVSTALMDMYMKCFSPEKAVDLF 503
Query: 290 DAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLS 349
+ + +K V W + GYA G E++ +F+ +L + RP+ L L+ +ELG L
Sbjct: 504 NRMPKKDVIAWAVLFSGYADNGMVHESMWVFRNMLSSGTRPDAIALVKILTTISELGILQ 563
Query: 350 KGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYA 409
+ + +++ NG E+N+ + SLI +++KC I A +VF+ + KD+ WS++I Y
Sbjct: 564 QAVCLHAFVIKNGFENNQFIGASLIEVYAKCSSIEDANKVFKGMTYKDVVTWSSIIAAYG 623
Query: 410 IHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPS 469
HG G++AL LFY+M + KP+ V + SILSACSHSG++ +G++ F M + + ++P+
Sbjct: 624 FHGQGEEALKLFYQMANHSDTKPNNVTFISILSACSHSGLIKEGINMFDIMVNKYKLKPN 683
Query: 470 IEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLL 529
EHY +VDLLGR G D+AL I+ MP++ +W LL AC H N+++GE AAKNL
Sbjct: 684 SEHYAIMVDLLGRMGELDMALDVINNMPMQAGPDIWGALLGACRIHQNIKMGEVAAKNLF 743
Query: 530 TLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGD 589
+L+P G YIL++N+++ W A R L+ ++RL K G S VE+ V+ F+AGD
Sbjct: 744 SLDPNHAGYYILLSNIYSVDENWHSATKLRRLVKEKRLNKIVGQSVVELKNEVRSFIAGD 803
Query: 590 RSHHLSVDIRKTLKELHIKLLEAGYIAEADI 620
R H S I + L +LH K+ E + + I
Sbjct: 804 RIHDESDHIYEILTKLHAKMREVAFDPQVQI 834
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 119/429 (27%), Positives = 227/429 (52%), Gaps = 17/429 (3%)
Query: 36 VLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRL 95
+L+ C + SI ++HS LK G D+F+ T L +Y++ + + K+ E P
Sbjct: 145 LLETCCSKLSI---SQLHSQCLKAGLVHDSFIVTKLNVLYARYASIHHAHKLFQETP--H 199
Query: 96 RSVVSWNSIISAHSRACLNDEAILVLKEM---WVLGLELSASTF---VSVVSGCSFRQ-- 147
R+V WN+++ ++ E + + ++M + +E + +++ S R+
Sbjct: 200 RTVYLWNALLRSYCFEGEWVETLSLFRQMNNVSSVSIEERPDNYSVSIALKSCAGLRKLL 259
Query: 148 -GISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGY 206
G +H + K+ ++ ++ + ++++ +Y K G++N+A +F E + +V WT+II GY
Sbjct: 260 LGKVIHGFLKKVR-IDGDMFVGSALIDLYTKCGQMNDAVKVFMEYPKPDVVLWTSIISGY 318
Query: 207 VNVGNVNEAFGLCNQM-RRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNE 265
G+ A ++M V+PD V +++ CAQ+ N L S+H + + G +N+
Sbjct: 319 EQSGSPELALAFFSRMVVSEKVSPDPVTLVSVASACAQLSNFKLGRSVHGFVKRKGLDNK 378
Query: 266 DPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLK 325
L N L+ +Y K G ++ A +F + +K + W++M+ YA G ++ ++LF +L
Sbjct: 379 LCLANSLLHLYGKTGSIKNASNLFREMSDKDIISWSTMVACYADNGAETDVLDLFNEMLD 438
Query: 326 TSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINK 385
++PN T+ + L ACA + +L +G +I E V G E V T+L+ M+ KC K
Sbjct: 439 KRIKPNWVTVVSVLRACACISNLEEGMKIHELAVNYGFEMETTVSTALMDMYMKCFSPEK 498
Query: 386 AKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACS 445
A ++F R+P KD+ W+ + +GYA +GM +++ +F M G +PDA+ IL+ S
Sbjct: 499 AVDLFNRMPKKDVIAWAVLFSGYADNGMVHESMWVFRNMLS-SGTRPDAIALVKILTTIS 557
Query: 446 HSGMVDDGL 454
G++ +
Sbjct: 558 ELGILQQAV 566
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 112/420 (26%), Positives = 199/420 (47%), Gaps = 13/420 (3%)
Query: 136 FVSVVSGCSFRQGIS-MHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGET 194
V ++ C + IS +H K GL+++ + + +YA++ ++ A +F E
Sbjct: 142 LVKLLETCCSKLSISQLHSQCLKAGLVHDSF-IVTKLNVLYARYASIHHAHKLFQETPHR 200
Query: 195 SIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVT-----PDLVVFLNLILGCAQVGNLFL 249
++ W ++ Y G E L QM +S PD + CA + L L
Sbjct: 201 TVYLWNALLRSYCFEGEWVETLSLFRQMNNVSSVSIEERPDNYSVSIALKSCAGLRKLLL 260
Query: 250 ALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQ 309
+H L K + + + + L+ +YTKCG + A +VF + V LWTS+I GY Q
Sbjct: 261 GKVIHGFLKKVRIDGDMFVGSALIDLYTKCGQMNDAVKVFMEYPKPDVVLWTSIISGYEQ 320
Query: 310 LGYPSEAVNLFKRLLKT-SVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQ 368
G P A+ F R++ + V P+ TL + SACA+L + G+ + ++ GL++
Sbjct: 321 SGSPELALAFFSRMVVSEKVSPDPVTLVSVASACAQLSNFKLGRSVHGFVKRKGLDNKLC 380
Query: 369 VQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVE 428
+ SL+H++ K G I A +F + DKD+ WS M+ YA +G L+LF +M +
Sbjct: 381 LANSLLHLYGKTGSIKNASNLFREMSDKDIISWSTMVACYADNGAETDVLDLFNEMLD-K 439
Query: 429 GLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDL 488
+KP+ V S+L AC+ +++G+ + + N+G E L+D+ + +
Sbjct: 440 RIKPNWVTVVSVLRACACISNLEEGMKIHE-LAVNYGFEMETTVSTALMDMYMKCFSPEK 498
Query: 489 ALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTS 548
A+ + MP + WA L S + V + +N+L+ G+ + I + + T+
Sbjct: 499 AVDLFNRMP-KKDVIAWAVLFSGYADNGMVHESMWVFRNMLS--SGTRPDAIALVKILTT 555
>gi|147795292|emb|CAN64990.1| hypothetical protein VITISV_001772 [Vitis vinifera]
Length = 891
Score = 402 bits (1033), Expect = e-109, Method: Compositional matrix adjust.
Identities = 228/628 (36%), Positives = 363/628 (57%), Gaps = 15/628 (2%)
Query: 1 MIRNSTNNGSFEETLST-YSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKV 59
MI +NG F E + Y +L + + + +TFP VLKAC ++ DG+R+H K+
Sbjct: 188 MISAYVHNGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKACG---TLVDGRRIHCWAFKL 244
Query: 60 GFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAIL 119
GFQ + FV LI MYS+ +R + D+MP R + SWN++IS + +A+
Sbjct: 245 GFQWNVFVAASLIHMYSRFGFTGIARSLFDDMP--FRDMGSWNAMISGLIQNGNAAQALD 302
Query: 120 VLKEMWVLGLELSASTFVSVVSGCSFRQGIS----MHCCVYKLGLLNNEIPLANSVMSMY 175
VL EM + G++++ T VS++ C IS +H V K GL ++ ++N++++MY
Sbjct: 303 VLDEMRLEGIKMNFVTVVSILPVCPQLGDISTAMLIHLYVIKHGL-EFDLFVSNALINMY 361
Query: 176 AKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFL 235
AKFG + +AR F ++ T +VSW +II Y + A G +M+ PDL+ +
Sbjct: 362 AKFGNLEDARKAFQQMFITDVVSWNSIIAAYEQNDDPVTAHGFFVKMQLNGFQPDLLTLV 421
Query: 236 NLILGCAQVGNLFLALSMHSLLLKSGYNNEDP-LDNLLVSMYTKCGDLELARRVFDAVLE 294
+L AQ + + S+H +++ G+ ED + N +V MY K G L+ A +VF+ +L
Sbjct: 422 SLASIVAQSRDCKNSRSVHGFIMRRGWLMEDVVIGNAVVDMYAKLGLLDSAHKVFEIILV 481
Query: 295 KSVFLWTSMIGGYAQLGYPSEAVNLFKRLLK-TSVRPNEATLATTLSACAELGSLSKGKE 353
K V W ++I GYAQ G SEA+ ++K + + + PN+ T + L A A +G+L +G
Sbjct: 482 KDVISWNTLITGYAQNGLASEAIEVYKMMEECKEIIPNQGTWVSILPAYAHVGALQQGMR 541
Query: 354 IEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGM 413
I ++ L + V T LI ++ KCGR+ A +F +VP + W+A+I+ + IHG
Sbjct: 542 IHGRVIKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQESSVTWNAIISCHGIHGH 601
Query: 414 GDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHY 473
++ L LF +M EG+KPD V + S+LSACSHSG V++G F+ MQ +GI+PS++HY
Sbjct: 602 AEKTLKLFGEMLD-EGVKPDHVTFVSLLSACSHSGFVEEGKWCFRLMQE-YGIKPSLKHY 659
Query: 474 LCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNP 533
C+VDLLGRAG ++A I +MP++ A +W LL AC H N+ELG++A+ L ++
Sbjct: 660 GCMVDLLGRAGYLEMAYGFIKDMPLQPDASIWGALLGACRIHGNIELGKFASDRLFEVDS 719
Query: 534 GSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHH 593
+ G Y+L++N++ + G W+ R L +R L K PGWS +E++ V VF G++SH
Sbjct: 720 KNVGYYVLLSNIYANVGKWEGVDKVRSLARERGLKKTPGWSTIEVNRKVDVFYTGNQSHP 779
Query: 594 LSVDIRKTLKELHIKLLEAGYIAEADIV 621
+I + L+ L K+ GYI + V
Sbjct: 780 KCKEIYEELRVLTAKMKSLGYIPDYSFV 807
Score = 207 bits (528), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 129/475 (27%), Positives = 246/475 (51%), Gaps = 10/475 (2%)
Query: 49 GKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAH 108
K +H+ ++ G Q F+ T L+++Y+ D SR D++P + V +WNS+ISA+
Sbjct: 135 AKCLHALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIP--QKDVYTWNSMISAY 192
Query: 109 SRACLNDEAILVLKEMWVLG-LELSASTFVSVVSGC-SFRQGISMHCCVYKLGLLNNEIP 166
EAI ++ ++ + TF V+ C + G +HC +KLG N +
Sbjct: 193 VHNGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKACGTLVDGRRIHCWAFKLGFQWN-VF 251
Query: 167 LANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMS 226
+A S++ MY++FG ARS+FD++ + SW +I G + GN +A + ++MR
Sbjct: 252 VAASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEG 311
Query: 227 VTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELAR 286
+ + V ++++ C Q+G++ A+ +H ++K G + + N L++MY K G+LE AR
Sbjct: 312 IKMNFVTVVSILPVCPQLGDISTAMLIHLYVIKHGLEFDLFVSNALINMYAKFGNLEDAR 371
Query: 287 RVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELG 346
+ F + V W S+I Y Q P A F ++ +P+ TL + S A+
Sbjct: 372 KAFQQMFITDVVSWNSIIAAYEQNDDPVTAHGFFVKMQLNGFQPDLLTLVSLASIVAQSR 431
Query: 347 SLSKGKEIEEYIVLNG-LESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMI 405
+ + +I+ G L + + +++ M++K G ++ A +VFE + KD+ W+ +I
Sbjct: 432 DCKNSRSVHGFIMRRGWLMEDVVIGNAVVDMYAKLGLLDSAHKVFEIILVKDVISWNTLI 491
Query: 406 NGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFF-KSMQSNF 464
GYA +G+ +A+ ++ M+ + + P+ + SIL A +H G + G+ + +++N
Sbjct: 492 TGYAQNGLASEAIEVYKMMEECKEIIPNQGTWVSILPAYAHVGALQQGMRIHGRVIKTNL 551
Query: 465 GIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVE 519
++ + CL+D+ G+ GR A+ +++P E + W ++S H + E
Sbjct: 552 HLDVFVA--TCLIDVYGKCGRLVDAMSLFYQVPQE-SSVTWNAIISCHGIHGHAE 603
>gi|356528513|ref|XP_003532847.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19191,
mitochondrial-like [Glycine max]
Length = 651
Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust.
Identities = 215/609 (35%), Positives = 342/609 (56%), Gaps = 8/609 (1%)
Query: 2 IRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGF 61
R+ N G + L + M Q+G+ N+ TFP VLKACA ++ + + + +H+HVLK F
Sbjct: 25 FRHLVNQGHAQNALILFRQMKQSGITPNNSTFPFVLKACAKLSHLRNSQIIHAHVLKSCF 84
Query: 62 QQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVL 121
Q + FVQT +DMY KC + V EMPVR + SWN+++ +++ D +L
Sbjct: 85 QSNIFVQTATVDMYVKCGRLEDAHNVFVEMPVR--DIASWNAMLLGFAQSGFLDRLSCLL 142
Query: 122 KEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGL---LNNEIPLANSVMSMYAKF 178
+ M + G+ A T + ++ + ++ VY G+ ++ ++ +AN++++ Y+K
Sbjct: 143 RHMRLSGIRPDAVTVLLLIDSILRVKSLTSLGAVYSFGIRIGVHMDVSVANTLIAAYSKC 202
Query: 179 GKVNEARSIFDEI--GETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
G + A ++FDEI G S+VSW ++I Y N +A M +PD+ LN
Sbjct: 203 GNLCSAETLFDEINSGLRSVVSWNSMIAAYANFEKHVKAVNCYKGMLDGGFSPDISTILN 262
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
L+ C Q LF L +HS +K G +++ + N L+ MY+KCGD+ AR +F+ + +K+
Sbjct: 263 LLSSCMQPKALFHGLLVHSHGVKLGCDSDVCVVNTLICMYSKCGDVHSARFLFNGMSDKT 322
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEE 356
WT MI YA+ GY SEA+ LF + +P+ T+ +S C + G+L GK I+
Sbjct: 323 CVSWTVMISAYAEKGYMSEAMTLFNAMEAAGEKPDLVTVLALISGCGQTGALELGKWIDN 382
Query: 357 YIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQ 416
Y + NGL+ N V +LI M++KCG N AKE+F + ++ + W+ MI A++G
Sbjct: 383 YSINNGLKDNVVVCNALIDMYAKCGGFNDAKELFYTMANRTVVSWTTMITACALNGDVKD 442
Query: 417 ALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCL 476
AL LF+ M + G+KP+ + + ++L AC+H G+V+ GL F M +GI P I+HY C+
Sbjct: 443 ALELFFMMLEM-GMKPNHITFLAVLQACAHGGLVERGLECFNMMTQKYGINPGIDHYSCM 501
Query: 477 VDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGST 536
VDLLGR G AL+ I MP E + +W+ LLSAC H +E+G+Y ++ L L P
Sbjct: 502 VDLLGRKGHLREALEIIKSMPFEPDSGIWSALLSACKLHGKMEMGKYVSEQLFELEPQVA 561
Query: 537 GNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSV 596
Y+ MAN++ SA MW+ A R M ++ K PG S ++++G +F DR H ++
Sbjct: 562 VPYVEMANIYASAEMWEGVAAIRRNMKYLQVRKSPGQSIIQVNGKPTIFTVEDRDHPETL 621
Query: 597 DIRKTLKEL 605
I L L
Sbjct: 622 YIYDMLDGL 630
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 72/289 (24%), Positives = 141/289 (48%), Gaps = 8/289 (2%)
Query: 194 TSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSM 253
+++ +W + VN G+ A L QM++ +TP+ F ++ CA++ +L + +
Sbjct: 16 STLFTWNSNFRHLVNQGHAQNALILFRQMKQSGITPNNSTFPFVLKACAKLSHLRNSQII 75
Query: 254 HSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYP 313
H+ +LKS + + + V MY KCG LE A VF + + + W +M+ G+AQ G+
Sbjct: 76 HAHVLKSCFQSNIFVQTATVDMYVKCGRLEDAHNVFVEMPVRDIASWNAMLLGFAQSGFL 135
Query: 314 SEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSL 373
L + + + +RP+ T+ + + + SL+ + + + G+ + V +L
Sbjct: 136 DRLSCLLRHMRLSGIRPDAVTVLLLIDSILRVKSLTSLGAVYSFGIRIGVHMDVSVANTL 195
Query: 374 IHMFSKCGRINKAKEVFERVPD--KDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLK 431
I +SKCG + A+ +F+ + + + W++MI YA +A+N YK G
Sbjct: 196 IAAYSKCGNLCSAETLFDEINSGLRSVVSWNSMIAAYANFEKHVKAVNC-YKGMLDGGFS 254
Query: 432 PDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLL 480
PD ++LS+C + GL + + G++ + +C+V+ L
Sbjct: 255 PDISTILNLLSSCMQPKALFHGL-----LVHSHGVKLGCDSDVCVVNTL 298
>gi|225435852|ref|XP_002265253.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Vitis vinifera]
Length = 972
Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust.
Identities = 230/723 (31%), Positives = 380/723 (52%), Gaps = 113/723 (15%)
Query: 9 GSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQ----- 63
G +EET+ + M+ GV + F FP V KAC+ + + GK V+ ++L +GF+
Sbjct: 169 GDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKDVYDYMLSIGFEGNSCVK 228
Query: 64 ----DAFVQTGLIDM----------------------YSKCSDFVSSRKVLDEMPVRLRS 97
D F++ G +D+ Y+ +F + K + +M +L
Sbjct: 229 GSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGEFKKALKCISDM--KLSG 286
Query: 98 V----VSWNSIISAHSRAC--------------LND----------------------EA 117
V V+WN+IIS ++++ L D EA
Sbjct: 287 VKPDQVTWNAIISGYAQSGQFEEASKYFLEMGGLKDFKPNVVSWTALIAGSEQNGYDFEA 346
Query: 118 ILVLKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMS 173
+ V ++M + G++ ++ T S VS C+ R G +H K+ L++++ + NS++
Sbjct: 347 LSVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVGNSLVD 406
Query: 174 MYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVV 233
YAK V AR F I +T +VSW ++ GY G+ EA L ++M+ + PD++
Sbjct: 407 YYAKCRSVEVARRKFGMIKQTDLVSWNAMLAGYALRGSHEEAIELLSEMKFQGIEPDIIT 466
Query: 234 FLNLILG-----------------------------------CAQVGNLFLALSMHSLLL 258
+ L+ G C QV NL L +H +L
Sbjct: 467 WNGLVTGFTQYGDGKAALEFFQRMHSMGMDPNTTTISGALAACGQVRNLKLGKEIHGYVL 526
Query: 259 KSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVN 318
++ + + L+SMY+ C LE+A VF + + V +W S+I AQ G A++
Sbjct: 527 RNHIELSTGVGSALISMYSGCDSLEVACSVFSELSTRDVVVWNSIISACAQSGRSVNALD 586
Query: 319 LFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFS 378
L + + ++V N T+ + L AC++L +L +GKEI ++I+ GL++ + SLI M+
Sbjct: 587 LLREMNLSNVEVNTVTMVSALPACSKLAALRQGKEIHQFIIRCGLDTCNFILNSLIDMYG 646
Query: 379 KCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYT 438
+CG I K++ +F+ +P +DL W+ MI+ Y +HG G A+NLF + + + GLKP+ + +T
Sbjct: 647 RCGSIQKSRRIFDLMPQRDLVSWNVMISVYGMHGFGMDAVNLFQQFRTM-GLKPNHITFT 705
Query: 439 SILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPV 498
++LSACSHSG++++G +FK M++ + ++P++E Y C+VDLL RAG+F+ L+ I +MP
Sbjct: 706 NLLSACSHSGLIEEGWKYFKMMKTEYAMDPAVEQYACMVDLLSRAGQFNETLEFIEKMPF 765
Query: 499 EVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATA 558
E A VW LL AC H N +L EYAA+ L L P S+GNY+LMAN++++AG W++AA
Sbjct: 766 EPNAAVWGSLLGACRIHCNPDLAEYAARYLFELEPQSSGNYVLMANIYSAAGRWEDAAKI 825
Query: 559 RGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKELHIKLLEAGYIAEA 618
R LM +R +TK PG S +E+ + FV GD SH L I ++ L+ + E GY+ +
Sbjct: 826 RCLMKERGVTKPPGCSWIEVKRKLHSFVVGDTSHPLMEQISAKMESLYFDIKEIGYVPDT 885
Query: 619 DIV 621
+ V
Sbjct: 886 NFV 888
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 113/444 (25%), Positives = 211/444 (47%), Gaps = 50/444 (11%)
Query: 36 VLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRL 95
+L+ C + ++ G +VH+ ++ G F+ + L+++Y + +R++ D+M
Sbjct: 95 ILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDKMSE-- 152
Query: 96 RSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCS----FRQGISM 151
R+V SW +I+ + +E I + M G+ F V CS +R G +
Sbjct: 153 RNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKDV 212
Query: 152 HCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGN 211
+ + +G N + S++ M+ K G+++ AR F+EI + W ++ GY + G
Sbjct: 213 YDYMLSIGFEGNSC-VKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGE 271
Query: 212 VNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNL 271
+A + M+ V PD V + N
Sbjct: 272 FKKALKCISDMKLSGVKPDQVTW-----------------------------------NA 296
Query: 272 LVSMYTKCGDLELARRVFDAV-----LEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKT 326
++S Y + G E A + F + + +V WT++I G Q GY EA+++F++++
Sbjct: 297 IISGYAQSGQFEEASKYFLEMGGLKDFKPNVVSWTALIAGSEQNGYDFEALSVFRKMVLE 356
Query: 327 SVRPNEATLATTLSACAELGSLSKGKEIEEY-IVLNGLESNRQVQTSLIHMFSKCGRINK 385
V+PN T+A+ +SAC L L G+EI Y I + L+S+ V SL+ ++KC +
Sbjct: 357 GVKPNSITIASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVGNSLVDYYAKCRSVEV 416
Query: 386 AKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACS 445
A+ F + DL W+AM+ GYA+ G ++A+ L +M+ +G++PD + + +++ +
Sbjct: 417 ARRKFGMIKQTDLVSWNAMLAGYALRGSHEEAIELLSEMK-FQGIEPDIITWNGLVTGFT 475
Query: 446 HSGMVDDGLSFFKSMQSNFGIEPS 469
G L FF+ M S G++P+
Sbjct: 476 QYGDGKAALEFFQRMHS-MGMDPN 498
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 126/488 (25%), Positives = 228/488 (46%), Gaps = 50/488 (10%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKV- 59
+I S NG E LS + M+ GV NS T + AC N++ + G+ +H + +KV
Sbjct: 333 LIAGSEQNGYDFEALSVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIHGYCIKVE 392
Query: 60 GFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAIL 119
D V L+D Y+KC +R+ ++ +VSWN++++ ++ ++EAI
Sbjct: 393 ELDSDLLVGNSLVDYYAKCRSVEVARRKFG--MIKQTDLVSWNAMLAGYALRGSHEEAIE 450
Query: 120 VLKEMWVLGLELSASTFVSVVSGCS-----------FRQGISM-------------HCC- 154
+L EM G+E T+ +V+G + F++ SM C
Sbjct: 451 LLSEMKFQGIEPDIITWNGLVTGFTQYGDGKAALEFFQRMHSMGMDPNTTTISGALAACG 510
Query: 155 ---VYKLG------LLNNEIPLANSV----MSMYAKFGKVNEARSIFDEIGETSIVSWTT 201
KLG +L N I L+ V +SMY+ + A S+F E+ +V W +
Sbjct: 511 QVRNLKLGKEIHGYVLRNHIELSTGVGSALISMYSGCDSLEVACSVFSELSTRDVVVWNS 570
Query: 202 IIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSG 261
II G A L +M +V + V ++ + C+++ L +H +++ G
Sbjct: 571 IISACAQSGRSVNALDLLREMNLSNVEVNTVTMVSALPACSKLAALRQGKEIHQFIIRCG 630
Query: 262 YNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFK 321
+ + + N L+ MY +CG ++ +RR+FD + ++ + W MI Y G+ +AVNLF+
Sbjct: 631 LDTCNFILNSLIDMYGRCGSIQKSRRIFDLMPQRDLVSWNVMISVYGMHGFGMDAVNLFQ 690
Query: 322 RLLKTSVRPNEATLATTLSACAELGSLSKG-KEIEEYIVLNGLESNRQVQTSLIHMFSKC 380
+ ++PN T LSAC+ G + +G K + ++ + ++ + S+
Sbjct: 691 QFRTMGLKPNHITFTNLLSACSHSGLIEEGWKYFKMMKTEYAMDPAVEQYACMVDLLSRA 750
Query: 381 GRINKAKEVFERVP-DKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDA----V 435
G+ N+ E E++P + + AVW +++ IH D A Y +++ L+P + V
Sbjct: 751 GQFNETLEFIEKMPFEPNAAVWGSLLGACRIHCNPDLAE---YAARYLFELEPQSSGNYV 807
Query: 436 VYTSILSA 443
+ +I SA
Sbjct: 808 LMANIYSA 815
Score = 149 bits (376), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 96/331 (29%), Positives = 172/331 (51%), Gaps = 9/331 (2%)
Query: 204 GGYVNV-GNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGY 262
GG V+ G +N A L + M + + ++ +++ C ++ NL L +H+ L+ +G
Sbjct: 61 GGSVHRNGVLNNAAMLLSSMDLTNPDECIEIYASILQKCRKLYNLRLGFQVHAQLVVNGV 120
Query: 263 NNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKR 322
+ + L + L+ +Y + G +E ARR+FD + E++VF WT+++ Y LG E + LF
Sbjct: 121 DVCEFLGSRLLEVYCQTGCVEDARRMFDKMSERNVFSWTAIMEMYCGLGDYEETIKLFYL 180
Query: 323 LLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGR 382
++ VRP+ AC+EL + GK++ +Y++ G E N V+ S++ MF KCGR
Sbjct: 181 MVNEGVRPDHFVFPKVFKACSELKNYRVGKDVYDYMLSIGFEGNSCVKGSILDMFIKCGR 240
Query: 383 INKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILS 442
++ A+ FE + KD+ +W+ M++GY G +AL M+ + G+KPD V + +I+S
Sbjct: 241 MDIARRFFEEIEFKDVFMWNIMVSGYTSKGEFKKALKCISDMK-LSGVKPDQVTWNAIIS 299
Query: 443 ACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVE--- 499
+ SG ++ +F M +P++ + L+ + G AL +M +E
Sbjct: 300 GYAQSGQFEEASKYFLEMGGLKDFKPNVVSWTALIAGSEQNGYDFEALSVFRKMVLEGVK 359
Query: 500 VQAQVWAPLLSAC----MKHHNVELGEYAAK 526
+ A +SAC + H E+ Y K
Sbjct: 360 PNSITIASAVSACTNLSLLRHGREIHGYCIK 390
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 86/352 (24%), Positives = 165/352 (46%), Gaps = 37/352 (10%)
Query: 106 SAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLL 161
S H LN+ A+L L M + + + S++ C + R G +H + G+
Sbjct: 63 SVHRNGVLNNAAML-LSSMDLTNPDECIEIYASILQKCRKLYNLRLGFQVHAQLVVNGVD 121
Query: 162 NNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQ 221
E L + ++ +Y + G V +AR +FD++ E ++ SWT I+ Y +G+ E L
Sbjct: 122 VCEF-LGSRLLEVYCQTGCVEDARRMFDKMSERNVFSWTAIMEMYCGLGDYEETIKLFYL 180
Query: 222 MRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGD 281
M V PD VF + C+++ N + ++ +L G+ + ++ M+ KCG
Sbjct: 181 MVNEGVRPDHFVFPKVFKACSELKNYRVGKDVYDYMLSIGFEGNSCVKGSILDMFIKCGR 240
Query: 282 LELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSA 341
+++ARR F+ + K VF+W M+ GY G +A+ + + V+P++ T +S
Sbjct: 241 MDIARRFFEEIEFKDVFMWNIMVSGYTSKGEFKKALKCISDMKLSGVKPDQVTWNAIISG 300
Query: 342 CAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVW 401
A+ G + + ++ + GL+ + ++ W
Sbjct: 301 YAQSGQFEEASKY--FLEMGGLKDFK----------------------------PNVVSW 330
Query: 402 SAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDG 453
+A+I G +G +AL++F KM +EG+KP+++ S +SAC++ ++ G
Sbjct: 331 TALIAGSEQNGYDFEALSVFRKMV-LEGVKPNSITIASAVSACTNLSLLRHG 381
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 103/396 (26%), Positives = 174/396 (43%), Gaps = 47/396 (11%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
++ T G + L + M G+ N+ T L AC + ++ GK +H +VL+
Sbjct: 470 LVTGFTQYGDGKAALEFFQRMHSMGMDPNTTTISGALAACGQVRNLKLGKEIHGYVLRNH 529
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+ V + LI MYS C + V E+ R VV WNSIISA +++ + A+ +
Sbjct: 530 IELSTGVGSALISMYSGCDSLEVACSVFSELST--RDVVVWNSIISACAQSGRSVNALDL 587
Query: 121 LKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
L+EM + +E++ T VS + CS RQG +H + + GL L NS++ MY
Sbjct: 588 LREMNLSNVEVNTVTMVSALPACSKLAALRQGKEIHQFIIRCGLDTCNFIL-NSLIDMYG 646
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
+ G + ++R IFD + + +VSW +I Y G +A L Q R M + P+ + F N
Sbjct: 647 RCGSIQKSRRIFDLMPQRDLVSWNVMISVYGMHGFGMDAVNLFQQFRTMGLKPNHITFTN 706
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
L+ C+ HS L++ G+ Y K E A ++ +
Sbjct: 707 LLSACS-----------HSGLIEEGWK------------YFKMMKTEYA-------MDPA 736
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEE 356
V + M+ ++ G +E + +++ PN A + L AC + ++ E
Sbjct: 737 VEQYACMVDLLSRAGQFNETLEFIEKM---PFEPNAAVWGSLLGAC----RIHCNPDLAE 789
Query: 357 YIVLNGLESNRQVQTSLIHM---FSKCGRINKAKEV 389
Y E Q + + M +S GR A ++
Sbjct: 790 YAARYLFELEPQSSGNYVLMANIYSAAGRWEDAAKI 825
>gi|62320270|dbj|BAD94552.1| hypothetical protein [Arabidopsis thaliana]
Length = 694
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 210/602 (34%), Positives = 351/602 (58%), Gaps = 15/602 (2%)
Query: 24 TGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVS 83
+G+H +SF L+ A K++H+ +L +G Q F+ T LI S D
Sbjct: 16 SGIHSDSFYASLIDSATHKAQL----KQIHARLLVLGLQFSGFLITKLIHASSSFGDITF 71
Query: 84 SRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGC 143
+R+V D++P + WN+II +SR +A+L+ M + + + TF ++ C
Sbjct: 72 ARQVFDDLP--RPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKAC 129
Query: 144 S----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFD--EIGETSIV 197
S + G +H V++LG + ++ + N ++++YAK ++ AR++F+ + E +IV
Sbjct: 130 SGLSHLQMGRFVHAQVFRLGF-DADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIV 188
Query: 198 SWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLL 257
SWT I+ Y G EA + + MR+M V PD V ++++ + +L S+H+ +
Sbjct: 189 SWTAIVSAYAQNGEPMEALEIFSHMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASV 248
Query: 258 LKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAV 317
+K G E L L +MY KCG + A+ +FD + ++ LW +MI GYA+ GY EA+
Sbjct: 249 VKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAI 308
Query: 318 NLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMF 377
++F ++ VRP+ ++ + +SACA++GSL + + + EY+ + + + ++LI MF
Sbjct: 309 DMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMF 368
Query: 378 SKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVY 437
+KCG + A+ VF+R D+D+ VWSAMI GY +HG +A++L+ M+ G+ P+ V +
Sbjct: 369 AKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMER-GGVHPNDVTF 427
Query: 438 TSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMP 497
+L AC+HSGMV +G FF M ++ I P +HY C++DLLGRAG D A + I MP
Sbjct: 428 LGLLMACNHSGMVREGWWFFNLM-ADHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMP 486
Query: 498 VEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAAT 557
V+ VW LLSAC KH +VELGEYAA+ L +++P +TG+Y+ ++NL+ +A +W A
Sbjct: 487 VQPGVTVWGALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAE 546
Query: 558 ARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKELHIKLLEAGYIAE 617
R M ++ L K+ G S VE+ G ++ F GD+SH +I + ++ + +L E G++A
Sbjct: 547 VRVRMKEKGLNKDVGCSWVEVRGRLEAFRVGDKSHPRYEEIERQVEWIESRLKEGGFVAN 606
Query: 618 AD 619
D
Sbjct: 607 KD 608
Score = 246 bits (628), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 151/492 (30%), Positives = 254/492 (51%), Gaps = 44/492 (8%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+IR + N F++ L YS+M V +SFTFP +LKAC+ ++ + G+ VH+ V ++G
Sbjct: 90 IIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLG 149
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F D FVQ GLI +Y+KC S+R V + +P+ R++VSW +I+SA+++ EA+ +
Sbjct: 150 FDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEI 209
Query: 121 LKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
M + ++ VSV++ + +QG S+H V K+G L E L S+ +MYA
Sbjct: 210 FSHMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMG-LEIEPDLLISLNTMYA 268
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K G+V A+ +FD++ +++ W +I GY G EA + ++M V PD + +
Sbjct: 269 KCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITS 328
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
I CAQVG+L A SM+ + +S Y ++ + + L+ M+ KCG +E AR VFD L++
Sbjct: 329 AISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRD 388
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEE 356
V +W++MI GY G EA++L++ + + V PN+ T L AC G + +G
Sbjct: 389 VVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFN 448
Query: 357 YIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQ 416
+ + + +Q +I + + G +++A EV + +P
Sbjct: 449 LMADHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMP---------------------- 486
Query: 417 ALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPS-IEHYLC 475
++P V+ ++LSAC V+ G + Q F I+PS HY+
Sbjct: 487 -------------VQPGVTVWGALLSACKKHRHVELGE---YAAQQLFSIDPSNTGHYVQ 530
Query: 476 LVDLLGRAGRFD 487
L +L A +D
Sbjct: 531 LSNLYAAARLWD 542
>gi|224132926|ref|XP_002321443.1| predicted protein [Populus trichocarpa]
gi|222868439|gb|EEF05570.1| predicted protein [Populus trichocarpa]
Length = 723
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 227/631 (35%), Positives = 360/631 (57%), Gaps = 14/631 (2%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+I NN E +S + ML+ G + N + F V +AC+N +I GK + +LK G
Sbjct: 13 LISCYANNEKAFEAISAFFDMLECGFYPNEYCFTGVFRACSNKENISLGKIIFGFLLKTG 72
Query: 61 -FQQDAFVQTGLIDMYSKCS-DFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAI 118
F+ D V LIDM+ K + D S+ KV D MP R +VV+W +I+ + + +A+
Sbjct: 73 YFESDVCVGCALIDMFVKGNGDLESAYKVFDRMPDR--NVVTWTLMITRFQQLGFSRDAV 130
Query: 119 LVLKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSM 174
+ +M + G T VVS C+ G HC V K GL + ++ + S++ M
Sbjct: 131 DLFLDMVLSGYVPDRFTLSGVVSACAEMGLLSLGRQFHCLVMKSGL-DLDVCVGCSLVDM 189
Query: 175 YAKF---GKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVN-EAFGLCNQMRRMSVTPD 230
YAK G V++AR +FD + +++SWT II GYV G + EA L +M + V P+
Sbjct: 190 YAKCVADGSVDDARKVFDRMPVHNVMSWTAIITGYVQSGGCDREAIELFLEMVQGQVKPN 249
Query: 231 LVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFD 290
F +++ CA + +++L +++L++K + + + N L+SMY++CG++E AR+ FD
Sbjct: 250 HFTFSSVLKACANLSDIWLGEQVYALVVKMRLASINCVGNSLISMYSRCGNMENARKAFD 309
Query: 291 AVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSK 350
+ EK++ + +++ YA+ EA LF + N T A+ LS + +G++ K
Sbjct: 310 VLFEKNLVSYNTIVNAYAKSLNSEEAFELFNEIEGAGTGVNAFTFASLLSGASSIGAIGK 369
Query: 351 GKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAI 410
G++I I+ +G +SN + +LI M+S+CG I A +VF + D ++ W++MI G+A
Sbjct: 370 GEQIHSRILKSGFKSNLHICNALISMYSRCGNIEAAFQVFNEMGDGNVISWTSMITGFAK 429
Query: 411 HGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSI 470
HG +AL F+KM G+ P+ V Y ++LSACSH G++ +GL FKSM+ GI P +
Sbjct: 430 HGFATRALETFHKMLEA-GVSPNEVTYIAVLSACSHVGLISEGLKHFKSMKVEHGIVPRM 488
Query: 471 EHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLT 530
EHY C+VDLLGR+G + A++ ++ MP + A V L AC H N++LG++AA+ +L
Sbjct: 489 EHYACVVDLLGRSGHLEEAMELVNSMPFKADALVLRTFLGACRVHGNMDLGKHAAEMILE 548
Query: 531 LNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDR 590
+P YIL++NL SAG W+E A R M +R LTKE G S +E++ V F GD
Sbjct: 549 QDPHDPAAYILLSNLHASAGQWEEVAEIRKKMKERNLTKEAGCSWIEVENKVHKFYVGDT 608
Query: 591 SHHLSVDIRKTLKELHIKLLEAGYIAEADIV 621
SH + +I L +L +K+ E GYI D V
Sbjct: 609 SHPQAQEIYDELDQLALKIKELGYIPSTDFV 639
Score = 175 bits (444), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 118/429 (27%), Positives = 214/429 (49%), Gaps = 12/429 (2%)
Query: 96 RSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCV 155
R +VSW+++IS ++ EAI +M G + F V CS ++ IS+ +
Sbjct: 5 RDLVSWSALISCYANNEKAFEAISAFFDMLECGFYPNEYCFTGVFRACSNKENISLGKII 64
Query: 156 Y----KLGLLNNEIPLANSVMSMYAKF-GKVNEARSIFDEIGETSIVSWTTIIGGYVNVG 210
+ K G +++ + +++ M+ K G + A +FD + + ++V+WT +I + +G
Sbjct: 65 FGFLLKTGYFESDVCVGCALIDMFVKGNGDLESAYKVFDRMPDRNVVTWTLMITRFQQLG 124
Query: 211 NVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDN 270
+A L M PD ++ CA++G L L H L++KSG + + +
Sbjct: 125 FSRDAVDLFLDMVLSGYVPDRFTLSGVVSACAEMGLLSLGRQFHCLVMKSGLDLDVCVGC 184
Query: 271 LLVSMYTKC---GDLELARRVFDAVLEKSVFLWTSMIGGYAQL-GYPSEAVNLFKRLLKT 326
LV MY KC G ++ AR+VFD + +V WT++I GY Q G EA+ LF +++
Sbjct: 185 SLVDMYAKCVADGSVDDARKVFDRMPVHNVMSWTAIITGYVQSGGCDREAIELFLEMVQG 244
Query: 327 SVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKA 386
V+PN T ++ L ACA L + G+++ +V L S V SLI M+S+CG + A
Sbjct: 245 QVKPNHFTFSSVLKACANLSDIWLGEQVYALVVKMRLASINCVGNSLISMYSRCGNMENA 304
Query: 387 KEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSH 446
++ F+ + +K+L ++ ++N YA ++A LF +++ G +A + S+LS S
Sbjct: 305 RKAFDVLFEKNLVSYNTIVNAYAKSLNSEEAFELFNEIEGA-GTGVNAFTFASLLSGASS 363
Query: 447 SGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWA 506
G + G + + G + ++ L+ + R G + A + +EM + W
Sbjct: 364 IGAIGKGEQIHSRILKS-GFKSNLHICNALISMYSRCGNIEAAFQVFNEMG-DGNVISWT 421
Query: 507 PLLSACMKH 515
+++ KH
Sbjct: 422 SMITGFAKH 430
>gi|359475558|ref|XP_003631701.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Vitis vinifera]
Length = 848
Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust.
Identities = 225/628 (35%), Positives = 363/628 (57%), Gaps = 15/628 (2%)
Query: 1 MIRNSTNNGSFEETLST-YSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKV 59
MI NG F E + Y +L T + +TFP VLKAC ++ DG+++H V K+
Sbjct: 145 MISAYVRNGHFREAIDCFYQLLLVTKFQADFYTFPPVLKAC---QTLVDGRKIHCWVFKL 201
Query: 60 GFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAIL 119
GFQ D FV LI MYS+ +R + D+MP R + SWN++IS + +A+
Sbjct: 202 GFQWDVFVAASLIHMYSRFGFVGIARSLFDDMP--FRDMGSWNAMISGLIQNGNAAQALD 259
Query: 120 VLKEMWVLGLELSASTFVSVVSGCSFRQGIS----MHCCVYKLGLLNNEIPLANSVMSMY 175
VL EM + G+ + + T S++ C+ IS +H V K GL E+ ++N++++MY
Sbjct: 260 VLDEMRLEGINMDSVTVASILPVCAQLGDISTATLIHLYVIKHGL-EFELFVSNALINMY 318
Query: 176 AKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFL 235
AKFG + +A+ +F ++ +VSW +II Y + A G +M+ + PDL+ +
Sbjct: 319 AKFGNLGDAQKVFQQMFLRDVVSWNSIIAAYEQNDDPVTARGFFFKMQLNGLEPDLLTLV 378
Query: 236 NLILGCAQVGNLFLALSMHSLLLKSGYNNEDP-LDNLLVSMYTKCGDLELARRVFDAVLE 294
+L AQ + + S+H +++ G+ E + N ++ MY K G ++ A +VF+ +
Sbjct: 379 SLASIAAQSRDYKNSRSVHGFIMRRGWLMEAVVIGNAVMDMYAKLGVIDSAHKVFNLIPV 438
Query: 295 KSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKT-SVRPNEATLATTLSACAELGSLSKGKE 353
K V W ++I GY Q G SEA+ +++ + + ++ N+ T + L+A A +G+L +G
Sbjct: 439 KDVVSWNTLISGYTQNGLASEAIEVYRMMEECREIKLNQGTWVSILAAYAHVGALQQGMR 498
Query: 354 IEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGM 413
I +++ L + V T LI ++ KCGR+ A +F +VP + W+A+I+ + IHG
Sbjct: 499 IHGHLIKTNLHLDVFVGTCLIDLYGKCGRLVDAMCLFYQVPRESSVPWNAIISCHGIHGH 558
Query: 414 GDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHY 473
G++AL LF +MQ EG+KPD V + S+LSACSHSG+VD+G FF MQ +GI+PS++HY
Sbjct: 559 GEKALKLFREMQD-EGVKPDHVTFISLLSACSHSGLVDEGKWFFHLMQE-YGIKPSLKHY 616
Query: 474 LCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNP 533
C+VDLLGRAG ++A I +MP+ A +W LL AC H N+ELG++A+ L ++
Sbjct: 617 GCMVDLLGRAGFLEMAYDFIKDMPLHPDASIWGALLGACRIHGNIELGKFASDRLFEVDS 676
Query: 534 GSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHH 593
+ G Y+L++N++ + G W+ R L +R L K PGWS +E++ V +F G++SH
Sbjct: 677 ENVGYYVLLSNIYANVGKWEGVDKVRSLARERGLKKTPGWSSIEVNRRVDIFYTGNQSHP 736
Query: 594 LSVDIRKTLKELHIKLLEAGYIAEADIV 621
+I L+ L K+ GYI + V
Sbjct: 737 KCKEIYAELRILTAKMKSLGYIPDYSFV 764
Score = 210 bits (535), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 140/496 (28%), Positives = 254/496 (51%), Gaps = 20/496 (4%)
Query: 42 NINSIWD-------GKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVR 94
+ NS++D KR+H+ ++ G Q F+ L+++Y+ D SR D+ ++
Sbjct: 78 DFNSLFDSCTKTLLAKRLHALLVVSGKIQSNFISIRLVNLYASLGDVSLSRGTFDQ--IQ 135
Query: 95 LRSVVSWNSIISAHSRACLNDEAILVLKE-MWVLGLELSASTFVSVVSGC-SFRQGISMH 152
+ V +WNS+ISA+ R EAI + + V + TF V+ C + G +H
Sbjct: 136 RKDVYTWNSMISAYVRNGHFREAIDCFYQLLLVTKFQADFYTFPPVLKACQTLVDGRKIH 195
Query: 153 CCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNV 212
C V+KLG ++ +A S++ MY++FG V ARS+FD++ + SW +I G + GN
Sbjct: 196 CWVFKLG-FQWDVFVAASLIHMYSRFGFVGIARSLFDDMPFRDMGSWNAMISGLIQNGNA 254
Query: 213 NEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLL 272
+A + ++MR + D V +++ CAQ+G++ A +H ++K G E + N L
Sbjct: 255 AQALDVLDEMRLEGINMDSVTVASILPVCAQLGDISTATLIHLYVIKHGLEFELFVSNAL 314
Query: 273 VSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNE 332
++MY K G+L A++VF + + V W S+I Y Q P A F ++ + P+
Sbjct: 315 INMYAKFGNLGDAQKVFQQMFLRDVVSWNSIIAAYEQNDDPVTARGFFFKMQLNGLEPDL 374
Query: 333 ATLATTLSACAELGSLSKGKEIEEYIVLNG-LESNRQVQTSLIHMFSKCGRINKAKEVFE 391
TL + S A+ + + +I+ G L + +++ M++K G I+ A +VF
Sbjct: 375 LTLVSLASIAAQSRDYKNSRSVHGFIMRRGWLMEAVVIGNAVMDMYAKLGVIDSAHKVFN 434
Query: 392 RVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVD 451
+P KD+ W+ +I+GY +G+ +A+ ++ M+ +K + + SIL+A +H G +
Sbjct: 435 LIPVKDVVSWNTLISGYTQNGLASEAIEVYRMMEECREIKLNQGTWVSILAAYAHVGALQ 494
Query: 452 DGLSFFKSM-QSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLS 510
G+ + ++N ++ + CL+DL G+ GR A+ +++P E W ++S
Sbjct: 495 QGMRIHGHLIKTNLHLDVFVG--TCLIDLYGKCGRLVDAMCLFYQVPRESSVP-WNAIIS 551
Query: 511 ACMKHHNVELGEYAAK 526
H + GE A K
Sbjct: 552 CHGIHGH---GEKALK 564
>gi|357502643|ref|XP_003621610.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355496625|gb|AES77828.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 881
Score = 400 bits (1028), Expect = e-108, Method: Compositional matrix adjust.
Identities = 213/623 (34%), Positives = 346/623 (55%), Gaps = 8/623 (1%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+I N F E L Y ML G+ + TF ++CA +++ G ++H++ LK
Sbjct: 242 VIAGYVRNDRFTEGLKLYKVMLDEGMGVSQATFASAFRSCAGLSAFELGTQLHAYALKTN 301
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F D V T +DMY+KC V +RKV + P R S N++I ++R EA+ +
Sbjct: 302 FGYDNIVGTATLDMYAKCDRMVDARKVFNTFPNPTRQ--SHNALIVGYARQDQVLEALEI 359
Query: 121 LKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
+ + L+ + ++ CS + +GI +H K GL N I +AN+++ MYA
Sbjct: 360 FRSLQKSYLDFDEISLSGALTACSAIKGYLEGIQLHGLAVKCGLDFN-ICVANTILDMYA 418
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K G + EA IFD++ VSW II + +V E L M R ++ PD F +
Sbjct: 419 KCGALMEACLIFDDMEIKDAVSWNAIIAAHEQNEHVEETLALFVSMLRSTMEPDDYTFGS 478
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
++ CA L + +H ++KSG + + + ++ MY KCG L A ++ + + E++
Sbjct: 479 VVKACAGKKALNYGMEVHGRVIKSGMGLDWFVGSAIIDMYCKCGMLVEAEKIHERLEERT 538
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEE 356
W S+I G++ A++ F R+L+ V P+ T AT L CA L ++ GK+I
Sbjct: 539 TVSWNSIISGFSSEKQGENALSYFSRMLQVGVIPDNFTYATVLDICANLATVELGKQIHG 598
Query: 357 YIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQ 416
I+ L S+ + ++++ M+SKCG + ++ +FE+ P +D WSAMI YA HG+G+
Sbjct: 599 QILKLQLHSDVYIASTIVDMYSKCGNMQDSRIMFEKAPKRDYVTWSAMICAYAYHGLGED 658
Query: 417 ALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCL 476
A+ LF +MQ ++ +KP+ ++ S+L AC+H G VD GL +F+ M+S++G++P +EHY C+
Sbjct: 659 AIKLFEEMQ-LQNVKPNHTIFISVLRACAHMGFVDKGLHYFREMRSHYGLDPQMEHYSCM 717
Query: 477 VDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGST 536
VDLLGR+G+ + AL+ I MP E +W LL C NVE+ E AA +LL L+P +
Sbjct: 718 VDLLGRSGQVNEALELIESMPFEADDVIWRTLLGICRLQGNVEVAEKAANSLLQLDPQDS 777
Query: 537 GNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSV 596
Y+L++N++ AGMW E A R M + +L KEPG S +++ V F+ GD++H S
Sbjct: 778 SAYVLLSNVYAIAGMWGEVAKIRSFMKNYKLKKEPGCSWIQVRDEVHAFLVGDKAHPRSE 837
Query: 597 DIRKTLKELHIKLLEAGYIAEAD 619
+I + L ++ GY+ E D
Sbjct: 838 EIYQQTHLLVDEMKWDGYVPEID 860
Score = 202 bits (514), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 120/457 (26%), Positives = 227/457 (49%), Gaps = 8/457 (1%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
M+ NG +++ ++ M + + TF +VLKAC I G +VH +++G
Sbjct: 141 MLSCYLQNGFHRKSIEIFTKMRLLEIQHDYATFAVVLKACTGIEDYGLGLQVHCLAIQMG 200
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F D T L+DMYS C + + EMP R+ V W+++I+ + R E + +
Sbjct: 201 FDSDVVTGTALVDMYSTCKKLDHAFNIFCEMPE--RNSVCWSAVIAGYVRNDRFTEGLKL 258
Query: 121 LKEMWVLGLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
K M G+ +S +TF S C +F G +H K + I + + + MYA
Sbjct: 259 YKVMLDEGMGVSQATFASAFRSCAGLSAFELGTQLHAYALKTNFGYDNI-VGTATLDMYA 317
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K ++ +AR +F+ + S +I GY V EA + +++ + D +
Sbjct: 318 KCDRMVDARKVFNTFPNPTRQSHNALIVGYARQDQVLEALEIFRSLQKSYLDFDEISLSG 377
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
+ C+ + + +H L +K G + + N ++ MY KCG L A +FD + K
Sbjct: 378 ALTACSAIKGYLEGIQLHGLAVKCGLDFNICVANTILDMYAKCGALMEACLIFDDMEIKD 437
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEE 356
W ++I + Q + E + LF +L++++ P++ T + + ACA +L+ G E+
Sbjct: 438 AVSWNAIIAAHEQNEHVEETLALFVSMLRSTMEPDDYTFGSVVKACAGKKALNYGMEVHG 497
Query: 357 YIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQ 416
++ +G+ + V +++I M+ KCG + +A+++ ER+ ++ W+++I+G++ G+
Sbjct: 498 RVIKSGMGLDWFVGSAIIDMYCKCGMLVEAEKIHERLEERTTVSWNSIISGFSSEKQGEN 557
Query: 417 ALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDG 453
AL+ F +M V G+ PD Y ++L C++ V+ G
Sbjct: 558 ALSYFSRMLQV-GVIPDNFTYATVLDICANLATVELG 593
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 125/515 (24%), Positives = 242/515 (46%), Gaps = 39/515 (7%)
Query: 31 FTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDE 90
TF + + C+N+ +I GK+ H+ + GF FV L+ Y KC + + V D+
Sbjct: 39 LTFSHIFQKCSNLKAINPGKQAHAQITVTGFVPTVFVSNCLLQFYCKCLNLNYAFNVFDK 98
Query: 91 MPVR-----------------------------LRSVVSWNSIISAHSRACLNDEAILVL 121
MP R R VVSWNS++S + + + ++I +
Sbjct: 99 MPQRDVISWNTMIFGYAGVGNMEFAQFLFDSMPERDVVSWNSMLSCYLQNGFHRKSIEIF 158
Query: 122 KEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAK 177
+M +L ++ +TF V+ C+ + G+ +HC ++G ++++ +++ MY+
Sbjct: 159 TKMRLLEIQHDYATFAVVLKACTGIEDYGLGLQVHCLAIQMGF-DSDVVTGTALVDMYST 217
Query: 178 FGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNL 237
K++ A +IF E+ E + V W+ +I GYV E L M + F +
Sbjct: 218 CKKLDHAFNIFCEMPERNSVCWSAVIAGYVRNDRFTEGLKLYKVMLDEGMGVSQATFASA 277
Query: 238 ILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSV 297
CA + L +H+ LK+ + ++ + + MY KC + AR+VF+ +
Sbjct: 278 FRSCAGLSAFELGTQLHAYALKTNFGYDNIVGTATLDMYAKCDRMVDARKVFNTFPNPTR 337
Query: 298 FLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEY 357
++I GYA+ EA+ +F+ L K+ + +E +L+ L+AC+ + +G ++
Sbjct: 338 QSHNALIVGYARQDQVLEALEIFRSLQKSYLDFDEISLSGALTACSAIKGYLEGIQLHGL 397
Query: 358 IVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQA 417
V GL+ N V +++ M++KCG + +A +F+ + KD W+A+I + + ++
Sbjct: 398 AVKCGLDFNICVANTILDMYAKCGALMEACLIFDDMEIKDAVSWNAIIAAHEQNEHVEET 457
Query: 418 LNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFF-KSMQSNFGIEPSIEHYLCL 476
L LF M ++PD + S++ AC+ ++ G+ + ++S G++ + +
Sbjct: 458 LALFVSMLR-STMEPDDYTFGSVVKACAGKKALNYGMEVHGRVIKSGMGLDWFVGS--AI 514
Query: 477 VDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSA 511
+D+ + G A K IHE E W ++S
Sbjct: 515 IDMYCKCGMLVEAEK-IHERLEERTTVSWNSIISG 548
Score = 132 bits (331), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 85/351 (24%), Positives = 173/351 (49%), Gaps = 3/351 (0%)
Query: 169 NSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVT 228
N+++ YA G + A+ +FD + E +VSW +++ Y+ G ++ + +MR + +
Sbjct: 108 NTMIFGYAGVGNMEFAQFLFDSMPERDVVSWNSMLSCYLQNGFHRKSIEIFTKMRLLEIQ 167
Query: 229 PDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRV 288
D F ++ C + + L L +H L ++ G++++ LV MY+ C L+ A +
Sbjct: 168 HDYATFAVVLKACTGIEDYGLGLQVHCLAIQMGFDSDVVTGTALVDMYSTCKKLDHAFNI 227
Query: 289 FDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSL 348
F + E++ W+++I GY + +E + L+K +L + ++AT A+ +CA L +
Sbjct: 228 FCEMPERNSVCWSAVIAGYVRNDRFTEGLKLYKVMLDEGMGVSQATFASAFRSCAGLSAF 287
Query: 349 SKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGY 408
G ++ Y + + V T+ + M++KC R+ A++VF P+ +A+I GY
Sbjct: 288 ELGTQLHAYALKTNFGYDNIVGTATLDMYAKCDRMVDARKVFNTFPNPTRQSHNALIVGY 347
Query: 409 AIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEP 468
A +AL +F +Q L D + + L+ACS +G+ + G++
Sbjct: 348 ARQDQVLEALEIFRSLQK-SYLDFDEISLSGALTACSAIKGYLEGIQ-LHGLAVKCGLDF 405
Query: 469 SIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVE 519
+I ++D+ + G A +M ++ A W +++A ++ +VE
Sbjct: 406 NICVANTILDMYAKCGALMEACLIFDDMEIK-DAVSWNAIIAAHEQNEHVE 455
>gi|225449798|ref|XP_002272111.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Vitis vinifera]
Length = 849
Score = 400 bits (1027), Expect = e-108, Method: Compositional matrix adjust.
Identities = 209/625 (33%), Positives = 355/625 (56%), Gaps = 8/625 (1%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
M++ N S ++ +S + M GV + F +LK C + + GK +H ++ G
Sbjct: 146 MLKGYARNSSLDDAVSFFCRMRYDGVRPVVYNFTYLLKVCGDNADLRKGKEIHCQLIVNG 205
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F + F TG+++MY+KC + K+ D MP R +V WN+IIS +++ A+ +
Sbjct: 206 FASNVFAMTGVVNMYAKCRLVEEAYKMFDRMPER--DLVCWNTIISGYAQNGFGKTALEL 263
Query: 121 LKEMWVLGLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
+ M G + T VS++ S R G S+H + G + + ++ +++ MY+
Sbjct: 264 VLRMQEEGKRPDSITIVSILPAVADVGSLRIGRSIHGYSMRAGF-ESFVNVSTALVDMYS 322
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K G V AR IFD + ++VSW ++I GYV G+ A + +M V V +
Sbjct: 323 KCGSVGTARLIFDRMTGKTVVSWNSMIDGYVQNGDPGAAMEIFQKMMDEQVEMTNVTVMG 382
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
+ CA +G++ +H LL + ++ + N L+SMY+KC +++A +F+ + K+
Sbjct: 383 ALHACADLGDVEQGRFVHKLLDQLELGSDVSVMNSLISMYSKCKRVDIAAEIFENLQHKT 442
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEE 356
+ W +MI GYAQ G +EA++ F ++ +++P+ T+ + + A AEL L + K I
Sbjct: 443 LVSWNAMILGYAQNGRINEAIDYFCKMQLQNIKPDSFTMVSVIPALAELSVLPQAKWIHG 502
Query: 357 YIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQ 416
++ L+ N V T+L+ M++KCG ++ A+++F+ + ++ + W+AMI+GY HG+G
Sbjct: 503 LVIRTCLDKNVFVATALVDMYAKCGAVHTARKLFDMMDERHVTTWNAMIDGYGTHGLGKA 562
Query: 417 ALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCL 476
AL LF KM+ E +KP+ V + +LSACSHSG+V++G +F SM+ ++G+EP+++HY +
Sbjct: 563 ALELFEKMKK-EVIKPNEVTFLCVLSACSHSGLVEEGFQYFGSMKKDYGLEPAMDHYGAM 621
Query: 477 VDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGST 536
VDLLGRA R + A I +MP+E V+ +L AC H NVELGE AA + L+P
Sbjct: 622 VDLLGRANRLNEAWDFIQKMPIEPAISVFGAMLGACRIHKNVELGEKAANRIFDLDPDDG 681
Query: 537 GNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSV 596
G ++L+AN++ +A MW + A R M+ + + K PGWS VE+ V F +G SH +
Sbjct: 682 GYHVLLANIYATASMWDKVARVRTTMEKKGIQKTPGWSVVELQNEVHTFYSGTTSHPQAK 741
Query: 597 DIRKTLKELHIKLLEAGYIAEADIV 621
I L+ L ++ AGY+ + + V
Sbjct: 742 KIYAFLETLGNRIKAAGYMPDTNSV 766
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 137/490 (27%), Positives = 239/490 (48%), Gaps = 24/490 (4%)
Query: 56 VLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLND 115
++K G + QT L+ ++ K + +V + ++ + +++++ ++R D
Sbjct: 100 IIKNGLYSEHLFQTKLVSLFCKFGSLHEAARVFQPIEDKIDEL--YHTMLKGYARNSSLD 157
Query: 116 EAILVLKEMWVLGLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSV 171
+A+ M G+ F ++ C R+G +HC + G +N + V
Sbjct: 158 DAVSFFCRMRYDGVRPVVYNFTYLLKVCGDNADLRKGKEIHCQLIVNGFASNVFAM-TGV 216
Query: 172 MSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDL 231
++MYAK V EA +FD + E +V W TII GY G A L +M+ PD
Sbjct: 217 VNMYAKCRLVEEAYKMFDRMPERDLVCWNTIISGYAQNGFGKTALELVLRMQEEGKRPDS 276
Query: 232 VVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDA 291
+ ++++ A VG+L + S+H +++G+ + + LV MY+KCG + AR +FD
Sbjct: 277 ITIVSILPAVADVGSLRIGRSIHGYSMRAGFESFVNVSTALVDMYSKCGSVGTARLIFDR 336
Query: 292 VLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKG 351
+ K+V W SMI GY Q G P A+ +F++++ V T+ L ACA+LG + +G
Sbjct: 337 MTGKTVVSWNSMIDGYVQNGDPGAAMEIFQKMMDEQVEMTNVTVMGALHACADLGDVEQG 396
Query: 352 KEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIH 411
+ + + + L S+ V SLI M+SKC R++ A E+FE + K L W+AMI GYA +
Sbjct: 397 RFVHKLLDQLELGSDVSVMNSLISMYSKCKRVDIAAEIFENLQHKTLVSWNAMILGYAQN 456
Query: 412 GMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDD-----GLSFFKSMQSNFGI 466
G ++A++ F KMQ ++ +KPD+ S++ A + ++ GL + N +
Sbjct: 457 GRINEAIDYFCKMQ-LQNIKPDSFTMVSVIPALAELSVLPQAKWIHGLVIRTCLDKNVFV 515
Query: 467 EPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKH----HNVELGE 522
+ LVD+ + G A K + +M E W ++ H +EL E
Sbjct: 516 ATA------LVDMYAKCGAVHTARK-LFDMMDERHVTTWNAMIDGYGTHGLGKAALELFE 568
Query: 523 YAAKNLLTLN 532
K ++ N
Sbjct: 569 KMKKEVIKPN 578
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 80/230 (34%), Positives = 127/230 (55%), Gaps = 4/230 (1%)
Query: 256 LLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSE 315
L++K+G +E LVS++ K G L A RVF + +K L+ +M+ GYA+ +
Sbjct: 99 LIIKNGLYSEHLFQTKLVSLFCKFGSLHEAARVFQPIEDKIDELYHTMLKGYARNSSLDD 158
Query: 316 AVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIH 375
AV+ F R+ VRP L C + L KGKEI +++NG SN T +++
Sbjct: 159 AVSFFCRMRYDGVRPVVYNFTYLLKVCGDNADLRKGKEIHCQLIVNGFASNVFAMTGVVN 218
Query: 376 MFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAV 435
M++KC + +A ++F+R+P++DL W+ +I+GYA +G G AL L +MQ EG +PD++
Sbjct: 219 MYAKCRLVEEAYKMFDRMPERDLVCWNTIISGYAQNGFGKTALELVLRMQE-EGKRPDSI 277
Query: 436 VYTSILSACSHSGMVDDGLSFFK-SMQSNFGIEPSIEHYLCLVDLLGRAG 484
SIL A + G + G S SM++ F E + LVD+ + G
Sbjct: 278 TIVSILPAVADVGSLRIGRSIHGYSMRAGF--ESFVNVSTALVDMYSKCG 325
>gi|297834086|ref|XP_002884925.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297330765|gb|EFH61184.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 694
Score = 400 bits (1027), Expect = e-108, Method: Compositional matrix adjust.
Identities = 207/602 (34%), Positives = 353/602 (58%), Gaps = 15/602 (2%)
Query: 24 TGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVS 83
+G+H +SF L+ + +++H+ +L +G Q F+ T LI S D
Sbjct: 16 SGIHSDSFYASLIDSSTHKAQL----RQIHARLLVLGLQFSGFLITKLIHASSSYGDITF 71
Query: 84 SRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGC 143
+R+V D++P V WN+II +SR +A+L+ +M + + + TF ++ C
Sbjct: 72 ARQVFDDLP--RPQVFPWNAIIRGYSRNNHFQDALLMYSKMQLARVSPDSFTFPHLLKAC 129
Query: 144 S----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFD--EIGETSIV 197
+ G +H V++LG ++ + N ++++YAK ++ AR++F+ + E +IV
Sbjct: 130 GGLSHLQMGRFVHAQVFRLGF-EADVFVQNGLIALYAKCRRLGCARTVFEGLPLPERTIV 188
Query: 198 SWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLL 257
SWT I+ Y G EA + +QMR+M V PD V ++++ + +L S+H+ +
Sbjct: 189 SWTAIVSAYAQNGEPVEALEIFSQMRKMDVKPDCVALVSVLNAFTCLQDLEQGRSIHASV 248
Query: 258 LKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAV 317
+K G E L L +MY KCG + A+ +FD + ++ LW +MI GYA+ G+ +A+
Sbjct: 249 MKMGLETEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGFAKDAI 308
Query: 318 NLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMF 377
+LF ++ VRP+ ++ + +SACA++GSL + + ++EY+ + + + ++LI MF
Sbjct: 309 DLFHEMINKDVRPDTISITSAISACAQVGSLEQARWMDEYVSRSDYRDDVFISSALIDMF 368
Query: 378 SKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVY 437
+KCG + A+ VF+R D+D+ VWSAMI GY +HG +A++L+ M+ +G+ P+ V +
Sbjct: 369 AKCGSVECARSVFDRTLDRDVVVWSAMIVGYGLHGQAREAISLYRAMER-DGVHPNDVTF 427
Query: 438 TSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMP 497
+L AC+HSGMV +G FF M ++ I P +HY C++DLLGRAG D A + I MP
Sbjct: 428 LGLLIACNHSGMVREGWWFFNRM-ADHKINPQQQHYACIIDLLGRAGHLDQAYEVIKCMP 486
Query: 498 VEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAAT 557
V+ VW LLSAC KH +VELG+YAA+ L +++P +TG+Y+ ++NL+ +A +W A
Sbjct: 487 VQPGVTVWGALLSACKKHRHVELGKYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAE 546
Query: 558 ARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKELHIKLLEAGYIAE 617
R M ++ L K+ G S VE+ G ++ F GD+SH +I + ++ + +L E G++A
Sbjct: 547 VRVRMKEKGLNKDVGCSWVEVRGRLEGFRVGDKSHPRYEEIERQVEWIESRLKEGGFVAN 606
Query: 618 AD 619
D
Sbjct: 607 KD 608
Score = 244 bits (623), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 149/492 (30%), Positives = 250/492 (50%), Gaps = 44/492 (8%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+IR + N F++ L YS M V +SFTFP +LKAC ++ + G+ VH+ V ++G
Sbjct: 90 IIRGYSRNNHFQDALLMYSKMQLARVSPDSFTFPHLLKACGGLSHLQMGRFVHAQVFRLG 149
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F+ D FVQ GLI +Y+KC +R V + +P+ R++VSW +I+SA+++ EA+ +
Sbjct: 150 FEADVFVQNGLIALYAKCRRLGCARTVFEGLPLPERTIVSWTAIVSAYAQNGEPVEALEI 209
Query: 121 LKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
+M + ++ VSV++ + QG S+H V K+G L E L S+ +MYA
Sbjct: 210 FSQMRKMDVKPDCVALVSVLNAFTCLQDLEQGRSIHASVMKMG-LETEPDLLISLNTMYA 268
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K G+V A+ +FD++ +++ W +I GY G +A L ++M V PD + +
Sbjct: 269 KCGQVATAKILFDKMKSPNLILWNAMISGYAKNGFAKDAIDLFHEMINKDVRPDTISITS 328
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
I CAQVG+L A M + +S Y ++ + + L+ M+ KCG +E AR VFD L++
Sbjct: 329 AISACAQVGSLEQARWMDEYVSRSDYRDDVFISSALIDMFAKCGSVECARSVFDRTLDRD 388
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEE 356
V +W++MI GY G EA++L++ + + V PN+ T L AC G + +G
Sbjct: 389 VVVWSAMIVGYGLHGQAREAISLYRAMERDGVHPNDVTFLGLLIACNHSGMVREGWWFFN 448
Query: 357 YIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQ 416
+ + + +Q +I + + G +++A EV + +P
Sbjct: 449 RMADHKINPQQQHYACIIDLLGRAGHLDQAYEVIKCMP---------------------- 486
Query: 417 ALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPS-IEHYLC 475
++P V+ ++LSAC V+ G + Q F I+PS HY+
Sbjct: 487 -------------VQPGVTVWGALLSACKKHRHVELGKY---AAQQLFSIDPSNTGHYVQ 530
Query: 476 LVDLLGRAGRFD 487
L +L A +D
Sbjct: 531 LSNLYAAARLWD 542
>gi|359482660|ref|XP_002285225.2| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
chloroplastic-like [Vitis vinifera]
Length = 872
Score = 399 bits (1026), Expect = e-108, Method: Compositional matrix adjust.
Identities = 225/610 (36%), Positives = 345/610 (56%), Gaps = 12/610 (1%)
Query: 9 GSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQ 68
G F+E L+ Y ML G+ + +TFP VL+ C + + G+ VH HV++ GF+ D V
Sbjct: 174 GYFDEALNLYHRMLWVGIRPDVYTFPCVLRTCGGLPDLARGREVHLHVIRYGFESDVDVV 233
Query: 69 TGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLG 128
LI MY KC D S+R V D MP R R +SWN++IS + + E + + M
Sbjct: 234 NALITMYVKCGDIFSARLVFDRMPRRDR--ISWNAMISGYFENDVCLEGLRLFFMMREFF 291
Query: 129 LELSASTFVSVVSGCSF----RQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEA 184
++ T SV+S C R G +H V K G + E+ + NS++ M++ G +EA
Sbjct: 292 VDPDLMTMTSVISACEALGDERLGREVHGYVIKTGFVA-EVSVNNSLIQMHSSVGCWDEA 350
Query: 185 RSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQV 244
+F ++ +VSWT +I GY G +A M V PD + +++ CA +
Sbjct: 351 EMVFSKMEFKDLVSWTAMISGYEKNGLPEKAVETYTIMEHEGVVPDEITIASVLSACAGL 410
Query: 245 GNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMI 304
G L + +H ++G + + N L+ MY+KC ++ A VF + K+V WTS+I
Sbjct: 411 GLLDKGIMLHEFADRTGLTSYVIVANSLIDMYSKCRCIDKALEVFHRIPNKNVISWTSII 470
Query: 305 GGYAQLGYPS-EAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGL 363
G +L Y S EA+ F++++ S++PN TL + LSACA +G+LS GKEI + + GL
Sbjct: 471 LGL-RLNYRSFEALFFFQQMI-LSLKPNSVTLVSVLSACARIGALSCGKEIHAHALRTGL 528
Query: 364 ESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYK 423
+ + +L+ M+ +CGR+ A F +KD+A W+ ++ GYA G G A+ LF+K
Sbjct: 529 GFDGFLPNALLDMYVRCGRMEPAWNQFNSC-EKDVASWNILLTGYAQQGKGGLAVELFHK 587
Query: 424 MQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRA 483
M + + PD + +TS+L ACS SGMV DGL +F+SM+ F I P+++HY +VDLLGRA
Sbjct: 588 MIESD-VNPDEITFTSLLCACSRSGMVTDGLEYFESMEHKFHIAPNLKHYASVVDLLGRA 646
Query: 484 GRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMA 543
GR + A + I +MP++ +W LL+AC + NVELGE AA+++ ++ S G YIL+
Sbjct: 647 GRLEDAYEFIKKMPIDPDPAIWGALLNACRIYQNVELGELAAQHIFEMDTKSVGYYILLC 706
Query: 544 NLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLK 603
NL+ +G W E A R +M + RLT +PG S VE+ G V F+ GD H +I L+
Sbjct: 707 NLYADSGKWDEVARVRKIMRENRLTVDPGCSWVEVAGQVHAFLTGDDFHPQIKEINAVLE 766
Query: 604 ELHIKLLEAG 613
+ K+ G
Sbjct: 767 GFYEKMEATG 776
Score = 231 bits (588), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 153/509 (30%), Positives = 256/509 (50%), Gaps = 14/509 (2%)
Query: 8 NGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFV 67
G E+ L SM + V T+ +L+ C + +G RVHS+V K + +
Sbjct: 72 KGDLEKALIHLDSMQELQVSVEEETYIALLRLCEWKRAASEGSRVHSYVSKTVTRLGVRL 131
Query: 68 QTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVL 127
L+ M+ + D V + V +M R + SWN ++ +++A DEA+ + M +
Sbjct: 132 GNALLSMFVRFGDLVEAWYVFGKMAE--RDLFSWNVLVGGYAKAGYFDEALNLYHRMLWV 189
Query: 128 GLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNE 183
G+ TF V+ C +G +H V + G +++ + N++++MY K G +
Sbjct: 190 GIRPDVYTFPCVLRTCGGLPDLARGREVHLHVIRYG-FESDVDVVNALITMYVKCGDIFS 248
Query: 184 ARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQ 243
AR +FD + +SW +I GY E L MR V PDL+ ++I C
Sbjct: 249 ARLVFDRMPRRDRISWNAMISGYFENDVCLEGLRLFFMMREFFVDPDLMTMTSVISACEA 308
Query: 244 VGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSM 303
+G+ L +H ++K+G+ E ++N L+ M++ G + A VF + K + WT+M
Sbjct: 309 LGDERLGREVHGYVIKTGFVAEVSVNNSLIQMHSSVGCWDEAEMVFSKMEFKDLVSWTAM 368
Query: 304 IGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGL 363
I GY + G P +AV + + V P+E T+A+ LSACA LG L KG + E+ GL
Sbjct: 369 ISGYEKNGLPEKAVETYTIMEHEGVVPDEITIASVLSACAGLGLLDKGIMLHEFADRTGL 428
Query: 364 ESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYK 423
S V SLI M+SKC I+KA EVF R+P+K++ W+++I G ++ +A LF+
Sbjct: 429 TSYVIVANSLIDMYSKCRCIDKALEVFHRIPNKNVISWTSIILGLRLNYRSFEA--LFFF 486
Query: 424 MQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFF-KSMQSNFGIEPSIEHYLCLVDLLGR 482
Q + LKP++V S+LSAC+ G + G ++++ G + + + L+D+ R
Sbjct: 487 QQMILSLKPNSVTLVSVLSACARIGALSCGKEIHAHALRTGLGFDGFLPN--ALLDMYVR 544
Query: 483 AGRFDLALKTIHEMPVEVQAQVWAPLLSA 511
GR + A + +V + W LL+
Sbjct: 545 CGRMEPAWNQFNSCEKDVAS--WNILLTG 571
Score = 204 bits (520), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 121/429 (28%), Positives = 225/429 (52%), Gaps = 15/429 (3%)
Query: 115 DEAILVLKEMWVLGLELSASTFVSVVSGCSFR----QGISMHCCVYKLGLLNNEIPLANS 170
++A++ L M L + + T+++++ C ++ +G +H V K + + L N+
Sbjct: 76 EKALIHLDSMQELQVSVEEETYIALLRLCEWKRAASEGSRVHSYVSKT-VTRLGVRLGNA 134
Query: 171 VMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPD 230
++SM+ +FG + EA +F ++ E + SW ++GGY G +EA L ++M + + PD
Sbjct: 135 LLSMFVRFGDLVEAWYVFGKMAERDLFSWNVLVGGYAKAGYFDEALNLYHRMLWVGIRPD 194
Query: 231 LVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFD 290
+ F ++ C + +L +H +++ G+ ++ + N L++MY KCGD+ AR VFD
Sbjct: 195 VYTFPCVLRTCGGLPDLARGREVHLHVIRYGFESDVDVVNALITMYVKCGDIFSARLVFD 254
Query: 291 AVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSK 350
+ + W +MI GY + E + LF + + V P+ T+ + +SAC LG
Sbjct: 255 RMPRRDRISWNAMISGYFENDVCLEGLRLFFMMREFFVDPDLMTMTSVISACEALGDERL 314
Query: 351 GKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAI 410
G+E+ Y++ G + V SLI M S G ++A+ VF ++ KDL W+AMI+GY
Sbjct: 315 GREVHGYVIKTGFVAEVSVNNSLIQMHSSVGCWDEAEMVFSKMEFKDLVSWTAMISGYEK 374
Query: 411 HGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSI 470
+G+ ++A+ + M+H EG+ PD + S+LSAC+ G++D G+ M F +
Sbjct: 375 NGLPEKAVETYTIMEH-EGVVPDEITIASVLSACAGLGLLDKGI-----MLHEFADRTGL 428
Query: 471 EHYL----CLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAK 526
Y+ L+D+ + D AL+ H +P + + +L + + + E + +
Sbjct: 429 TSYVIVANSLIDMYSKCRCIDKALEVFHRIPNKNVISWTSIILGLRLNYRSFEALFFFQQ 488
Query: 527 NLLTLNPGS 535
+L+L P S
Sbjct: 489 MILSLKPNS 497
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 136/475 (28%), Positives = 235/475 (49%), Gaps = 26/475 (5%)
Query: 4 NSTNNGSFE-----ETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLK 58
N+ +G FE E L + M + V + T V+ AC + G+ VH +V+K
Sbjct: 265 NAMISGYFENDVCLEGLRLFFMMREFFVDPDLMTMTSVISACEALGDERLGREVHGYVIK 324
Query: 59 VGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAI 118
GF + V LI M+S + + V +M + +VSW ++IS + + L ++A+
Sbjct: 325 TGFVAEVSVNNSLIQMHSSVGCWDEAEMVFSKM--EFKDLVSWTAMISGYEKNGLPEKAV 382
Query: 119 LVLKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSM 174
M G+ T SV+S C+ +GI +H + GL + I +ANS++ M
Sbjct: 383 ETYTIMEHEGVVPDEITIASVLSACAGLGLLDKGIMLHEFADRTGLTSYVI-VANSLIDM 441
Query: 175 YAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVF 234
Y+K +++A +F I +++SWT+II G EA QM +S+ P+ V
Sbjct: 442 YSKCRCIDKALEVFHRIPNKNVISWTSIILGLRLNYRSFEALFFFQQM-ILSLKPNSVTL 500
Query: 235 LNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLE 294
++++ CA++G L +H+ L++G + L N L+ MY +CG +E A F++ E
Sbjct: 501 VSVLSACARIGALSCGKEIHAHALRTGLGFDGFLPNALLDMYVRCGRMEPAWNQFNSC-E 559
Query: 295 KSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEI 354
K V W ++ GYAQ G AV LF +++++ V P+E T + L AC+ G ++ G E
Sbjct: 560 KDVASWNILLTGYAQQGKGGLAVELFHKMIESDVNPDEITFTSLLCACSRSGMVTDGLEY 619
Query: 355 EEYIVLN-GLESNRQVQTSLIHMFSKCGRINKAKEVFERVP-DKDLAVWSAMINGYAIHG 412
E + + N + S++ + + GR+ A E +++P D D A+W A++N I+
Sbjct: 620 FESMEHKFHIAPNLKHYASVVDLLGRAGRLEDAYEFIKKMPIDPDPAIWGALLNACRIYQ 679
Query: 413 ---MGDQALNLFYKMQHVEGLKPDAVVYTSIL-SACSHSGMVDDGLSFFKSMQSN 463
+G+ A QH+ + +V Y +L + + SG D+ K M+ N
Sbjct: 680 NVELGELA------AQHIFEMDTKSVGYYILLCNLYADSGKWDEVARVRKIMREN 728
Score = 105 bits (261), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 74/249 (29%), Positives = 119/249 (47%), Gaps = 9/249 (3%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI NG E+ + TY+ M GV + T VL ACA + + G +H + G
Sbjct: 368 MISGYEKNGLPEKAVETYTIMEHEGVVPDEITIASVLSACAGLGLLDKGIMLHEFADRTG 427
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
V LIDMYSKC + +V +P ++V+SW SII + EA+
Sbjct: 428 LTSYVIVANSLIDMYSKCRCIDKALEVFHRIPN--KNVISWTSIILGLRLNYRSFEALFF 485
Query: 121 LKEMWVLGLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
++M +L L+ ++ T VSV+S C + G +H + GL + L N+++ MY
Sbjct: 486 FQQM-ILSLKPNSVTLVSVLSACARIGALSCGKEIHAHALRTGLGFDGF-LPNALLDMYV 543
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
+ G++ A + F+ E + SW ++ GY G A L ++M V PD + F +
Sbjct: 544 RCGRMEPAWNQFNSC-EKDVASWNILLTGYAQQGKGGLAVELFHKMIESDVNPDEITFTS 602
Query: 237 LILGCAQVG 245
L+ C++ G
Sbjct: 603 LLCACSRSG 611
>gi|297798510|ref|XP_002867139.1| EMB2758 [Arabidopsis lyrata subsp. lyrata]
gi|297312975|gb|EFH43398.1| EMB2758 [Arabidopsis lyrata subsp. lyrata]
Length = 824
Score = 399 bits (1026), Expect = e-108, Method: Compositional matrix adjust.
Identities = 221/630 (35%), Positives = 365/630 (57%), Gaps = 21/630 (3%)
Query: 1 MIRNSTNNGSFEETLSTYS-SMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKV 59
MI G E + +S ML +G+ + TFP VLKAC N+ DG ++H LK
Sbjct: 123 MISGYGRAGYSSEVIRCFSLFMLSSGLQPDYRTFPSVLKACRNVT---DGNKIHCLALKF 179
Query: 60 GFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAIL 119
GF D +V LI +Y + V++R + DEMP R + SWN++IS + ++ EA L
Sbjct: 180 GFMWDVYVAASLIHLYCRYGAVVNARILFDEMPTR--DMGSWNAMISGYCQSGNAKEA-L 236
Query: 120 VLKEMWVLGLE-LSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSM 174
L + GL + + T VS++S C+ F +G+++H K GL +E+ ++N ++ +
Sbjct: 237 TLSD----GLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGL-ESELFVSNKLIDL 291
Query: 175 YAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVF 234
YA+FG + + + +FD + ++SW +II Y A L +MR + PD +
Sbjct: 292 YAEFGSLKDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAILLFQEMRLSRIQPDCLTL 351
Query: 235 LNLILGCAQVGNLFLALSMHSLLLKSGYNNED-PLDNLLVSMYTKCGDLELARRVFDAVL 293
++L +Q+G + S+ L+ G+ ED + N +V MY K G ++ AR VF+ +
Sbjct: 352 ISLASILSQLGEIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLP 411
Query: 294 EKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKT--SVRPNEATLATTLSACAELGSLSKG 351
K V W ++I GYAQ G+ SEA+ ++ + + + N+ T + L AC++ G+L +G
Sbjct: 412 NKDVISWNTIISGYAQNGFASEAIEMYNIMEEEGGEISANQGTWVSVLPACSQAGALRQG 471
Query: 352 KEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIH 411
++ ++ NGL + V TSL M+ KCGR++ A +F ++P + W+ +I + H
Sbjct: 472 MKLHGRLLKNGLYLDVFVGTSLADMYGKCGRLDDALSLFYQIPRVNSVPWNTLIACHGFH 531
Query: 412 GMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIE 471
G G++A+ LF +M EG+KPD + + ++LSACSHSG+VD+G F+ MQ+++GI PS++
Sbjct: 532 GHGEKAVMLFKEMLD-EGVKPDHITFVTLLSACSHSGLVDEGEWCFEMMQTDYGITPSLK 590
Query: 472 HYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTL 531
HY C+VDL GRAG+ ++AL I MP++ A +W LLSAC H NV+LG+ A+++L +
Sbjct: 591 HYGCMVDLYGRAGQLEIALNFIKSMPLQPDASIWGALLSACRVHGNVDLGKIASEHLFEV 650
Query: 532 NPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRS 591
P G ++L++N++ SAG W+ R + + L K PGWS +E+D V+VF G+++
Sbjct: 651 EPEHVGYHVLLSNMYASAGKWEGVDEIRSITSGKGLRKTPGWSSMEVDNKVEVFYTGNQT 710
Query: 592 HHLSVDIRKTLKELHIKLLEAGYIAEADIV 621
H + ++ + L LH KL GY+ + V
Sbjct: 711 HPMYEEMYRELTALHEKLKMVGYVPDHRFV 740
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 85/304 (27%), Positives = 152/304 (50%), Gaps = 18/304 (5%)
Query: 154 CVYKLGLLNNEIP---LANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVG 210
C++ +++N I ++ ++++Y G V AR FD I + +W +I GY G
Sbjct: 72 CLHARLVVSNAIQNVCISAKLVNLYCYLGNVALARYTFDHIHNRDVYAWNLMISGYGRAG 131
Query: 211 NVNEAFGLCNQMRRMS--VTPDLVVFLNLILGCAQV--GNLFLALSMHSLLLKSGYNNED 266
+E C + +S + PD F +++ C V GN +H L LK G+ +
Sbjct: 132 YSSEVI-RCFSLFMLSSGLQPDYRTFPSVLKACRNVTDGN-----KIHCLALKFGFMWDV 185
Query: 267 PLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKT 326
+ L+ +Y + G + AR +FD + + + W +MI GY Q G EA+ L L
Sbjct: 186 YVAASLIHLYCRYGAVVNARILFDEMPTRDMGSWNAMISGYCQSGNAKEALTLSDGLRAM 245
Query: 327 SVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKA 386
+ T+ + LSAC E G ++G I Y + +GLES V LI ++++ G +
Sbjct: 246 ----DSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGSLKDC 301
Query: 387 KEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSH 446
++VF+R+ +DL W+++I Y ++ +A+ LF +M+ + ++PD + S+ S S
Sbjct: 302 QKVFDRMYVRDLISWNSIIKAYELNEQPLRAILLFQEMR-LSRIQPDCLTLISLASILSQ 360
Query: 447 SGMV 450
G +
Sbjct: 361 LGEI 364
Score = 112 bits (279), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 76/256 (29%), Positives = 126/256 (49%), Gaps = 12/256 (4%)
Query: 246 NLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIG 305
NL A +H+ L+ S + LV++Y G++ LAR FD + + V+ W MI
Sbjct: 66 NLQSAKCLHARLVVSNAIQNVCISAKLVNLYCYLGNVALARYTFDHIHNRDVYAWNLMIS 125
Query: 306 GYAQLGYPSEAVNLFKR-LLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLE 364
GY + GY SE + F +L + ++P+ T + L AC +++ G +I + G
Sbjct: 126 GYGRAGYSSEVIRCFSLFMLSSGLQPDYRTFPSVLKACR---NVTDGNKIHCLALKFGFM 182
Query: 365 SNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKM 424
+ V SLIH++ + G + A+ +F+ +P +D+ W+AMI+GY G +AL L
Sbjct: 183 WDVYVAASLIHLYCRYGAVVNARILFDEMPTRDMGSWNAMISGYCQSGNAKEALTL---- 238
Query: 425 QHVEGLKP-DAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRA 483
+GL+ D+V S+LSAC+ +G + G++ S G+E + L+DL
Sbjct: 239 --SDGLRAMDSVTVVSLLSACTEAGDFNRGVT-IHSYSIKHGLESELFVSNKLIDLYAEF 295
Query: 484 GRFDLALKTIHEMPVE 499
G K M V
Sbjct: 296 GSLKDCQKVFDRMYVR 311
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 79/188 (42%), Gaps = 12/188 (6%)
Query: 347 SLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMIN 406
+L K + +V++ N + L++++ G + A+ F+ + ++D+ W+ MI+
Sbjct: 66 NLQSAKCLHARLVVSNAIQNVCISAKLVNLYCYLGNVALARYTFDHIHNRDVYAWNLMIS 125
Query: 407 GYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGI 466
GY G + + F GL+PD + S+L AC + V DG + + FG
Sbjct: 126 GYGRAGYSSEVIRCFSLFMLSSGLQPDYRTFPSVLKACRN---VTDG-NKIHCLALKFGF 181
Query: 467 EPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAK 526
+ L+ L R G A EMP W ++S + N AK
Sbjct: 182 MWDVYVAASLIHLYCRYGAVVNARILFDEMPTRDMGS-WNAMISGYCQSGN-------AK 233
Query: 527 NLLTLNPG 534
LTL+ G
Sbjct: 234 EALTLSDG 241
>gi|297743367|emb|CBI36234.3| unnamed protein product [Vitis vinifera]
Length = 906
Score = 399 bits (1026), Expect = e-108, Method: Compositional matrix adjust.
Identities = 225/610 (36%), Positives = 345/610 (56%), Gaps = 12/610 (1%)
Query: 9 GSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQ 68
G F+E L+ Y ML G+ + +TFP VL+ C + + G+ VH HV++ GF+ D V
Sbjct: 174 GYFDEALNLYHRMLWVGIRPDVYTFPCVLRTCGGLPDLARGREVHLHVIRYGFESDVDVV 233
Query: 69 TGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLG 128
LI MY KC D S+R V D MP R R +SWN++IS + + E + + M
Sbjct: 234 NALITMYVKCGDIFSARLVFDRMPRRDR--ISWNAMISGYFENDVCLEGLRLFFMMREFF 291
Query: 129 LELSASTFVSVVSGCSF----RQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEA 184
++ T SV+S C R G +H V K G + E+ + NS++ M++ G +EA
Sbjct: 292 VDPDLMTMTSVISACEALGDERLGREVHGYVIKTGFVA-EVSVNNSLIQMHSSVGCWDEA 350
Query: 185 RSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQV 244
+F ++ +VSWT +I GY G +A M V PD + +++ CA +
Sbjct: 351 EMVFSKMEFKDLVSWTAMISGYEKNGLPEKAVETYTIMEHEGVVPDEITIASVLSACAGL 410
Query: 245 GNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMI 304
G L + +H ++G + + N L+ MY+KC ++ A VF + K+V WTS+I
Sbjct: 411 GLLDKGIMLHEFADRTGLTSYVIVANSLIDMYSKCRCIDKALEVFHRIPNKNVISWTSII 470
Query: 305 GGYAQLGYPS-EAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGL 363
G +L Y S EA+ F++++ S++PN TL + LSACA +G+LS GKEI + + GL
Sbjct: 471 LGL-RLNYRSFEALFFFQQMI-LSLKPNSVTLVSVLSACARIGALSCGKEIHAHALRTGL 528
Query: 364 ESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYK 423
+ + +L+ M+ +CGR+ A F +KD+A W+ ++ GYA G G A+ LF+K
Sbjct: 529 GFDGFLPNALLDMYVRCGRMEPAWNQFNSC-EKDVASWNILLTGYAQQGKGGLAVELFHK 587
Query: 424 MQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRA 483
M + + PD + +TS+L ACS SGMV DGL +F+SM+ F I P+++HY +VDLLGRA
Sbjct: 588 MIESD-VNPDEITFTSLLCACSRSGMVTDGLEYFESMEHKFHIAPNLKHYASVVDLLGRA 646
Query: 484 GRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMA 543
GR + A + I +MP++ +W LL+AC + NVELGE AA+++ ++ S G YIL+
Sbjct: 647 GRLEDAYEFIKKMPIDPDPAIWGALLNACRIYQNVELGELAAQHIFEMDTKSVGYYILLC 706
Query: 544 NLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLK 603
NL+ +G W E A R +M + RLT +PG S VE+ G V F+ GD H +I L+
Sbjct: 707 NLYADSGKWDEVARVRKIMRENRLTVDPGCSWVEVAGQVHAFLTGDDFHPQIKEINAVLE 766
Query: 604 ELHIKLLEAG 613
+ K+ G
Sbjct: 767 GFYEKMEATG 776
Score = 230 bits (587), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 153/509 (30%), Positives = 256/509 (50%), Gaps = 14/509 (2%)
Query: 8 NGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFV 67
G E+ L SM + V T+ +L+ C + +G RVHS+V K + +
Sbjct: 72 KGDLEKALIHLDSMQELQVSVEEETYIALLRLCEWKRAASEGSRVHSYVSKTVTRLGVRL 131
Query: 68 QTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVL 127
L+ M+ + D V + V +M R + SWN ++ +++A DEA+ + M +
Sbjct: 132 GNALLSMFVRFGDLVEAWYVFGKMAE--RDLFSWNVLVGGYAKAGYFDEALNLYHRMLWV 189
Query: 128 GLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNE 183
G+ TF V+ C +G +H V + G +++ + N++++MY K G +
Sbjct: 190 GIRPDVYTFPCVLRTCGGLPDLARGREVHLHVIRYG-FESDVDVVNALITMYVKCGDIFS 248
Query: 184 ARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQ 243
AR +FD + +SW +I GY E L MR V PDL+ ++I C
Sbjct: 249 ARLVFDRMPRRDRISWNAMISGYFENDVCLEGLRLFFMMREFFVDPDLMTMTSVISACEA 308
Query: 244 VGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSM 303
+G+ L +H ++K+G+ E ++N L+ M++ G + A VF + K + WT+M
Sbjct: 309 LGDERLGREVHGYVIKTGFVAEVSVNNSLIQMHSSVGCWDEAEMVFSKMEFKDLVSWTAM 368
Query: 304 IGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGL 363
I GY + G P +AV + + V P+E T+A+ LSACA LG L KG + E+ GL
Sbjct: 369 ISGYEKNGLPEKAVETYTIMEHEGVVPDEITIASVLSACAGLGLLDKGIMLHEFADRTGL 428
Query: 364 ESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYK 423
S V SLI M+SKC I+KA EVF R+P+K++ W+++I G ++ +A LF+
Sbjct: 429 TSYVIVANSLIDMYSKCRCIDKALEVFHRIPNKNVISWTSIILGLRLNYRSFEA--LFFF 486
Query: 424 MQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFF-KSMQSNFGIEPSIEHYLCLVDLLGR 482
Q + LKP++V S+LSAC+ G + G ++++ G + + + L+D+ R
Sbjct: 487 QQMILSLKPNSVTLVSVLSACARIGALSCGKEIHAHALRTGLGFDGFLPN--ALLDMYVR 544
Query: 483 AGRFDLALKTIHEMPVEVQAQVWAPLLSA 511
GR + A + +V + W LL+
Sbjct: 545 CGRMEPAWNQFNSCEKDVAS--WNILLTG 571
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 121/429 (28%), Positives = 225/429 (52%), Gaps = 15/429 (3%)
Query: 115 DEAILVLKEMWVLGLELSASTFVSVVSGCSFR----QGISMHCCVYKLGLLNNEIPLANS 170
++A++ L M L + + T+++++ C ++ +G +H V K + + L N+
Sbjct: 76 EKALIHLDSMQELQVSVEEETYIALLRLCEWKRAASEGSRVHSYVSKT-VTRLGVRLGNA 134
Query: 171 VMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPD 230
++SM+ +FG + EA +F ++ E + SW ++GGY G +EA L ++M + + PD
Sbjct: 135 LLSMFVRFGDLVEAWYVFGKMAERDLFSWNVLVGGYAKAGYFDEALNLYHRMLWVGIRPD 194
Query: 231 LVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFD 290
+ F ++ C + +L +H +++ G+ ++ + N L++MY KCGD+ AR VFD
Sbjct: 195 VYTFPCVLRTCGGLPDLARGREVHLHVIRYGFESDVDVVNALITMYVKCGDIFSARLVFD 254
Query: 291 AVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSK 350
+ + W +MI GY + E + LF + + V P+ T+ + +SAC LG
Sbjct: 255 RMPRRDRISWNAMISGYFENDVCLEGLRLFFMMREFFVDPDLMTMTSVISACEALGDERL 314
Query: 351 GKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAI 410
G+E+ Y++ G + V SLI M S G ++A+ VF ++ KDL W+AMI+GY
Sbjct: 315 GREVHGYVIKTGFVAEVSVNNSLIQMHSSVGCWDEAEMVFSKMEFKDLVSWTAMISGYEK 374
Query: 411 HGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSI 470
+G+ ++A+ + M+H EG+ PD + S+LSAC+ G++D G+ M F +
Sbjct: 375 NGLPEKAVETYTIMEH-EGVVPDEITIASVLSACAGLGLLDKGI-----MLHEFADRTGL 428
Query: 471 EHYL----CLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAK 526
Y+ L+D+ + D AL+ H +P + + +L + + + E + +
Sbjct: 429 TSYVIVANSLIDMYSKCRCIDKALEVFHRIPNKNVISWTSIILGLRLNYRSFEALFFFQQ 488
Query: 527 NLLTLNPGS 535
+L+L P S
Sbjct: 489 MILSLKPNS 497
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 136/475 (28%), Positives = 235/475 (49%), Gaps = 26/475 (5%)
Query: 4 NSTNNGSFE-----ETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLK 58
N+ +G FE E L + M + V + T V+ AC + G+ VH +V+K
Sbjct: 265 NAMISGYFENDVCLEGLRLFFMMREFFVDPDLMTMTSVISACEALGDERLGREVHGYVIK 324
Query: 59 VGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAI 118
GF + V LI M+S + + V +M + +VSW ++IS + + L ++A+
Sbjct: 325 TGFVAEVSVNNSLIQMHSSVGCWDEAEMVFSKM--EFKDLVSWTAMISGYEKNGLPEKAV 382
Query: 119 LVLKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSM 174
M G+ T SV+S C+ +GI +H + GL + I +ANS++ M
Sbjct: 383 ETYTIMEHEGVVPDEITIASVLSACAGLGLLDKGIMLHEFADRTGLTSYVI-VANSLIDM 441
Query: 175 YAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVF 234
Y+K +++A +F I +++SWT+II G EA QM +S+ P+ V
Sbjct: 442 YSKCRCIDKALEVFHRIPNKNVISWTSIILGLRLNYRSFEALFFFQQM-ILSLKPNSVTL 500
Query: 235 LNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLE 294
++++ CA++G L +H+ L++G + L N L+ MY +CG +E A F++ E
Sbjct: 501 VSVLSACARIGALSCGKEIHAHALRTGLGFDGFLPNALLDMYVRCGRMEPAWNQFNSC-E 559
Query: 295 KSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEI 354
K V W ++ GYAQ G AV LF +++++ V P+E T + L AC+ G ++ G E
Sbjct: 560 KDVASWNILLTGYAQQGKGGLAVELFHKMIESDVNPDEITFTSLLCACSRSGMVTDGLEY 619
Query: 355 EEYIVLN-GLESNRQVQTSLIHMFSKCGRINKAKEVFERVP-DKDLAVWSAMINGYAIHG 412
E + + N + S++ + + GR+ A E +++P D D A+W A++N I+
Sbjct: 620 FESMEHKFHIAPNLKHYASVVDLLGRAGRLEDAYEFIKKMPIDPDPAIWGALLNACRIYQ 679
Query: 413 ---MGDQALNLFYKMQHVEGLKPDAVVYTSIL-SACSHSGMVDDGLSFFKSMQSN 463
+G+ A QH+ + +V Y +L + + SG D+ K M+ N
Sbjct: 680 NVELGELA------AQHIFEMDTKSVGYYILLCNLYADSGKWDEVARVRKIMREN 728
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/249 (29%), Positives = 119/249 (47%), Gaps = 9/249 (3%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI NG E+ + TY+ M GV + T VL ACA + + G +H + G
Sbjct: 368 MISGYEKNGLPEKAVETYTIMEHEGVVPDEITIASVLSACAGLGLLDKGIMLHEFADRTG 427
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
V LIDMYSKC + +V +P ++V+SW SII + EA+
Sbjct: 428 LTSYVIVANSLIDMYSKCRCIDKALEVFHRIPN--KNVISWTSIILGLRLNYRSFEALFF 485
Query: 121 LKEMWVLGLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
++M +L L+ ++ T VSV+S C + G +H + GL + L N+++ MY
Sbjct: 486 FQQM-ILSLKPNSVTLVSVLSACARIGALSCGKEIHAHALRTGLGFDGF-LPNALLDMYV 543
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
+ G++ A + F+ E + SW ++ GY G A L ++M V PD + F +
Sbjct: 544 RCGRMEPAWNQFNSC-EKDVASWNILLTGYAQQGKGGLAVELFHKMIESDVNPDEITFTS 602
Query: 237 LILGCAQVG 245
L+ C++ G
Sbjct: 603 LLCACSRSG 611
>gi|359475368|ref|XP_003631669.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Vitis vinifera]
Length = 891
Score = 399 bits (1025), Expect = e-108, Method: Compositional matrix adjust.
Identities = 226/628 (35%), Positives = 363/628 (57%), Gaps = 15/628 (2%)
Query: 1 MIRNSTNNGSFEETLST-YSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKV 59
MI +NG F E + Y +L + + + +TFP VLKAC ++ DG+++H K+
Sbjct: 188 MISAYVHNGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKACG---TLVDGRKIHCWAFKL 244
Query: 60 GFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAIL 119
GFQ + FV LI MYS+ +R + D+MP R + SWN++IS + +A+
Sbjct: 245 GFQWNVFVAASLIHMYSRFGFTGIARSLFDDMP--FRDMGSWNAMISGLIQNGNAAQALD 302
Query: 120 VLKEMWVLGLELSASTFVSVVSGCSFRQGIS----MHCCVYKLGLLNNEIPLANSVMSMY 175
VL EM + G++++ T VS++ C IS +H V K GL ++ ++N++++MY
Sbjct: 303 VLDEMRLEGIKMNFVTVVSILPVCPQLGDISTAMLIHLYVIKHGL-EFDLFVSNALINMY 361
Query: 176 AKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFL 235
AKFG + +AR F ++ T +VSW +II Y + A G +M+ PDL+ +
Sbjct: 362 AKFGNLEDARKAFQQMFITDVVSWNSIIAAYEQNDDPVTAHGFFVKMQLNGFQPDLLTLV 421
Query: 236 NLILGCAQVGNLFLALSMHSLLLKSGYNNEDP-LDNLLVSMYTKCGDLELARRVFDAVLE 294
+L AQ + + S+H +++ G+ ED + N +V MY K G L+ A +VF+ +
Sbjct: 422 SLASIVAQSRDCKNSRSVHGFIMRRGWLMEDVVIGNAVVDMYAKLGLLDSAHKVFEIIPV 481
Query: 295 KSVFLWTSMIGGYAQLGYPSEAVNLFKRLLK-TSVRPNEATLATTLSACAELGSLSKGKE 353
K V W ++I GYAQ G SEA+ ++K + + + PN+ T + L A A +G+L +G +
Sbjct: 482 KDVISWNTLITGYAQNGLASEAIEVYKMMEECKEIIPNQGTWVSILPAYAHVGALQQGMK 541
Query: 354 IEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGM 413
I ++ L + V T LI ++ KCGR+ A +F +VP + W+A+I+ + IHG
Sbjct: 542 IHGRVIKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQESSVTWNAIISCHGIHGH 601
Query: 414 GDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHY 473
++ L LF +M EG+KPD V + S+LSACSHSG V++G F+ MQ +GI+PS++HY
Sbjct: 602 AEKTLKLFGEMLD-EGVKPDHVTFVSLLSACSHSGFVEEGKWCFRLMQE-YGIKPSLKHY 659
Query: 474 LCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNP 533
C+VDLLGRAG ++A I +MP++ A +W LL AC H N+ELG++A+ L ++
Sbjct: 660 GCMVDLLGRAGYLEMAYDFIKDMPLQPDASIWGALLGACRIHGNIELGKFASDRLFEVDS 719
Query: 534 GSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHH 593
+ G Y+L++N++ + G W+ R L +R L K PGWS +E++ V VF G++SH
Sbjct: 720 KNVGYYVLLSNIYANVGKWEGVDKVRSLARERGLKKTPGWSTIEVNRKVDVFYTGNQSHP 779
Query: 594 LSVDIRKTLKELHIKLLEAGYIAEADIV 621
+I + L+ L K+ GYI + V
Sbjct: 780 KCKEIYEELRVLTAKMKSLGYIPDYSFV 807
Score = 213 bits (541), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 130/475 (27%), Positives = 247/475 (52%), Gaps = 10/475 (2%)
Query: 49 GKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAH 108
K +H+ ++ G Q F+ T L+++Y+ D SR D++P + V +WNS+ISA+
Sbjct: 135 AKCLHALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIP--QKDVYAWNSMISAY 192
Query: 109 SRACLNDEAILVLKEMWVLG-LELSASTFVSVVSGC-SFRQGISMHCCVYKLGLLNNEIP 166
EAI ++ ++ + TF V+ C + G +HC +KLG N +
Sbjct: 193 VHNGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKACGTLVDGRKIHCWAFKLGFQWN-VF 251
Query: 167 LANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMS 226
+A S++ MY++FG ARS+FD++ + SW +I G + GN +A + ++MR
Sbjct: 252 VAASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEG 311
Query: 227 VTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELAR 286
+ + V ++++ C Q+G++ A+ +H ++K G + + N L++MY K G+LE AR
Sbjct: 312 IKMNFVTVVSILPVCPQLGDISTAMLIHLYVIKHGLEFDLFVSNALINMYAKFGNLEDAR 371
Query: 287 RVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELG 346
+ F + V W S+I Y Q P A F ++ +P+ TL + S A+
Sbjct: 372 KAFQQMFITDVVSWNSIIAAYEQNDDPVTAHGFFVKMQLNGFQPDLLTLVSLASIVAQSR 431
Query: 347 SLSKGKEIEEYIVLNG-LESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMI 405
+ + +I+ G L + + +++ M++K G ++ A +VFE +P KD+ W+ +I
Sbjct: 432 DCKNSRSVHGFIMRRGWLMEDVVIGNAVVDMYAKLGLLDSAHKVFEIIPVKDVISWNTLI 491
Query: 406 NGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFF-KSMQSNF 464
GYA +G+ +A+ ++ M+ + + P+ + SIL A +H G + G+ + +++N
Sbjct: 492 TGYAQNGLASEAIEVYKMMEECKEIIPNQGTWVSILPAYAHVGALQQGMKIHGRVIKTNL 551
Query: 465 GIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVE 519
++ + CL+D+ G+ GR A+ +++P E + W ++S H + E
Sbjct: 552 HLDVFVA--TCLIDVYGKCGRLVDAMSLFYQVPQE-SSVTWNAIISCHGIHGHAE 603
>gi|225436683|ref|XP_002262885.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Vitis vinifera]
Length = 866
Score = 399 bits (1025), Expect = e-108, Method: Compositional matrix adjust.
Identities = 220/621 (35%), Positives = 357/621 (57%), Gaps = 14/621 (2%)
Query: 7 NNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAF 66
NG E+ L +S M G+ N FTF VL A ++ G +VH+ V+K G F
Sbjct: 170 QNGLNEQALKLFSQMQLEGIKPNPFTFAAVLGGLAADGAVEKGVQVHTMVIKSGLDSTIF 229
Query: 67 VQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWV 126
V +++MYSK ++ V D M R+ VSWNS+I+ L+ EA + M +
Sbjct: 230 VGNSMVNMYSKSLMVSDAKAVFDSM--ENRNAVSWNSMIAGFVTNGLDLEAFELFYRMRL 287
Query: 127 LGLELSASTFVSVVSGCSFRQGIS----MHCCVYKLGLLNNEIPLANSVMSMYAKFGKVN 182
G++L+ + F +V+ C+ + +S +HC V K G + ++ + ++M Y+K +++
Sbjct: 288 EGVKLTQTIFATVIKLCANIKEMSFAKQLHCQVIKNGS-DFDLNIKTALMVAYSKCSEID 346
Query: 183 EARSIFDEI-GETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGC 241
+A +F + G ++VSWT II GYV G + A L QMRR V P+ + ++
Sbjct: 347 DAFKLFCMMHGVQNVVSWTAIISGYVQNGRTDRAMNLFCQMRREGVRPNHFTYSTILTAN 406
Query: 242 AQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWT 301
A V +H+L++K+ Y N + L Y+K GD A ++F+ + EK + W+
Sbjct: 407 AAVS----PSQIHALVVKTNYENSPSVGTALSDSYSKIGDANEAAKIFELIDEKDIVAWS 462
Query: 302 SMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACA-ELGSLSKGKEIEEYIVL 360
+M+ GYAQ+G AV +F +L K V PNE T ++ L+ACA S+ +GK+ +
Sbjct: 463 AMLSGYAQMGDIEGAVKIFLQLAKEGVEPNEFTFSSVLNACAAPTASVEQGKQFHSCSIK 522
Query: 361 NGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNL 420
+G + V ++L+ M++K G I A EVF+R D+DL W++MI+GYA HG G ++L +
Sbjct: 523 SGFSNALCVSSALVTMYAKRGNIESANEVFKRQVDRDLVSWNSMISGYAQHGCGKKSLKI 582
Query: 421 FYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLL 480
F +M+ + L+ D + + ++SAC+H+G+V++G +F M ++ I P++EHY C+VDL
Sbjct: 583 FEEMRS-KNLELDGITFIGVISACTHAGLVNEGQRYFDLMVKDYHIVPTMEHYSCMVDLY 641
Query: 481 GRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYI 540
RAG + A+ I++MP A +W LL+AC H NV+LGE AA+ L++L P + Y+
Sbjct: 642 SRAGMLEKAMDLINKMPFPAGATIWRTLLAACRVHLNVQLGELAAEKLISLQPQDSAAYV 701
Query: 541 LMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRK 600
L++N++ +AG W+E A R LMD +++ KE G+S +E+ F+AGD SH S I
Sbjct: 702 LLSNIYATAGNWQERAKVRKLMDMKKVKKEAGYSWIEVKNKTFSFMAGDLSHPQSDRIYL 761
Query: 601 TLKELHIKLLEAGYIAEADIV 621
L+EL I+L +AGY + V
Sbjct: 762 KLEELSIRLKDAGYYPDTKYV 782
Score = 236 bits (601), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 155/521 (29%), Positives = 282/521 (54%), Gaps = 26/521 (4%)
Query: 6 TNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDA 65
+ N +E L+ + + ++G + + VLK C + GK+VH +K GF +D
Sbjct: 68 SRNDQNKEALNLFLGLRRSGSPTDGSSLSCVLKVCGCLFDRIVGKQVHCQCIKCGFVEDV 127
Query: 66 FVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMW 125
V T L+DMY K +V DEM R+++VVSW S+++ + + LN++A+ + +M
Sbjct: 128 SVGTSLVDMYMKTESVEDGERVFDEM--RVKNVVSWTSLLAGYRQNGLNEQALKLFSQMQ 185
Query: 126 VLGLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKV 181
+ G++ + TF +V+ G + +G+ +H V K G L++ I + NS+++MY+K V
Sbjct: 186 LEGIKPNPFTFAAVLGGLAADGAVEKGVQVHTMVIKSG-LDSTIFVGNSMVNMYSKSLMV 244
Query: 182 NEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGC 241
++A+++FD + + VSW ++I G+V G EAF L +MR V +F +I C
Sbjct: 245 SDAKAVFDSMENRNAVSWNSMIAGFVTNGLDLEAFELFYRMRLEGVKLTQTIFATVIKLC 304
Query: 242 AQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLE-KSVFLW 300
A + + A +H ++K+G + + + L+ Y+KC +++ A ++F + ++V W
Sbjct: 305 ANIKEMSFAKQLHCQVIKNGSDFDLNIKTALMVAYSKCSEIDDAFKLFCMMHGVQNVVSW 364
Query: 301 TSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVL 360
T++I GY Q G A+NLF ++ + VRPN T +T L+A A + +I +V
Sbjct: 365 TAIISGYVQNGRTDRAMNLFCQMRREGVRPNHFTYSTILTANAAVSP----SQIHALVVK 420
Query: 361 NGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNL 420
E++ V T+L +SK G N+A ++FE + +KD+ WSAM++GYA G + A+ +
Sbjct: 421 TNYENSPSVGTALSDSYSKIGDANEAAKIFELIDEKDIVAWSAMLSGYAQMGDIEGAVKI 480
Query: 421 FYKMQHVEGLKPDAVVYTSILSACSH-SGMVDDGLSFFK-SMQSNFGIEPSIEHYLC--- 475
F ++ EG++P+ ++S+L+AC+ + V+ G F S++S F + LC
Sbjct: 481 FLQLAK-EGVEPNEFTFSSVLNACAAPTASVEQGKQFHSCSIKSGFS------NALCVSS 533
Query: 476 -LVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKH 515
LV + + G + A + + V+ W ++S +H
Sbjct: 534 ALVTMYAKRGNIESA-NEVFKRQVDRDLVSWNSMISGYAQH 573
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 122/441 (27%), Positives = 228/441 (51%), Gaps = 15/441 (3%)
Query: 84 SRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSV--VS 141
S+++ DE P + + N ++ SR N EA+ + + G S+ V V
Sbjct: 45 SQQLFDETP--QQGLSRNNHLLFEFSRNDQNKEALNLFLGLRRSGSPTDGSSLSCVLKVC 102
Query: 142 GCSFRQ--GISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSW 199
GC F + G +HC K G + ++ + S++ MY K V + +FDE+ ++VSW
Sbjct: 103 GCLFDRIVGKQVHCQCIKCGFVE-DVSVGTSLVDMYMKTESVEDGERVFDEMRVKNVVSW 161
Query: 200 TTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLK 259
T+++ GY G +A L +QM+ + P+ F ++ G A G + + +H++++K
Sbjct: 162 TSLLAGYRQNGLNEQALKLFSQMQLEGIKPNPFTFAAVLGGLAADGAVEKGVQVHTMVIK 221
Query: 260 SGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNL 319
SG ++ + N +V+MY+K + A+ VFD++ ++ W SMI G+ G EA L
Sbjct: 222 SGLDSTIFVGNSMVNMYSKSLMVSDAKAVFDSMENRNAVSWNSMIAGFVTNGLDLEAFEL 281
Query: 320 FKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSK 379
F R+ V+ + AT + CA + +S K++ ++ NG + + ++T+L+ +SK
Sbjct: 282 FYRMRLEGVKLTQTIFATVIKLCANIKEMSFAKQLHCQVIKNGSDFDLNIKTALMVAYSK 341
Query: 380 CGRINKAKEVFERVPD-KDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYT 438
C I+ A ++F + +++ W+A+I+GY +G D+A+NLF +M+ EG++P+ Y+
Sbjct: 342 CSEIDDAFKLFCMMHGVQNVVSWTAIISGYVQNGRTDRAMNLFCQMRR-EGVRPNHFTYS 400
Query: 439 SILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPV 498
+IL+A + V +++N+ PS+ L D + G + A K I E+
Sbjct: 401 TILTA---NAAVSPSQIHALVVKTNYENSPSVG--TALSDSYSKIGDANEAAK-IFELID 454
Query: 499 EVQAQVWAPLLSACMKHHNVE 519
E W+ +LS + ++E
Sbjct: 455 EKDIVAWSAMLSGYAQMGDIE 475
Score = 168 bits (426), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 110/418 (26%), Positives = 208/418 (49%), Gaps = 13/418 (3%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI NG E + M GV F V+K CANI + K++H V+K G
Sbjct: 265 MIAGFVTNGLDLEAFELFYRMRLEGVKLTQTIFATVIKLCANIKEMSFAKQLHCQVIKNG 324
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
D ++T L+ YSKCS+ + K+ M +++VVSW +IIS + + D A+ +
Sbjct: 325 SDFDLNIKTALMVAYSKCSEIDDAFKLFCMMH-GVQNVVSWTAIISGYVQNGRTDRAMNL 383
Query: 121 LKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGK 180
+M G+ + T+ ++++ + +H V K N + ++ Y+K G
Sbjct: 384 FCQMRREGVRPNHFTYSTILTANAAVSPSQIHALVVKTN-YENSPSVGTALSDSYSKIGD 442
Query: 181 VNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILG 240
NEA IF+ I E IV+W+ ++ GY +G++ A + Q+ + V P+ F +++
Sbjct: 443 ANEAAKIFELIDEKDIVAWSAMLSGYAQMGDIEGAVKIFLQLAKEGVEPNEFTFSSVLNA 502
Query: 241 CAQ-VGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFL 299
CA ++ HS +KSG++N + + LV+MY K G++E A VF +++ +
Sbjct: 503 CAAPTASVEQGKQFHSCSIKSGFSNALCVSSALVTMYAKRGNIESANEVFKRQVDRDLVS 562
Query: 300 WTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKE-----I 354
W SMI GYAQ G +++ +F+ + ++ + T +SAC G +++G+ +
Sbjct: 563 WNSMISGYAQHGCGKKSLKIFEEMRSKNLELDGITFIGVISACTHAGLVNEGQRYFDLMV 622
Query: 355 EEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVP-DKDLAVWSAMINGYAIH 411
++Y ++ +E + ++ ++S+ G + KA ++ ++P +W ++ +H
Sbjct: 623 KDYHIVPTMEH----YSCMVDLYSRAGMLEKAMDLINKMPFPAGATIWRTLLAACRVH 676
>gi|413923916|gb|AFW63848.1| hypothetical protein ZEAMMB73_561595 [Zea mays]
Length = 1174
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 222/637 (34%), Positives = 358/637 (56%), Gaps = 27/637 (4%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+IR + G F + Y SML+ V N +TFP VLKAC+ + + G+ +H+H G
Sbjct: 71 LIRAYSWLGPFHAAIDLYRSMLRFRVAPNKYTFPFVLKACSALVDLRAGRTIHAHAAAAG 130
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
D FV T LID+Y +C+ F +R V +MP +R VV+WN++++ ++ + AI
Sbjct: 131 LHTDLFVSTALIDLYIRCARFGPARNVFAKMP--MRDVVAWNAMLAGYANHGMYHHAIAH 188
Query: 121 LKEMWVLG-LELSASTFVSVVS-----GCSFRQGISMHCCVYKLGLLNNE--IPLANSVM 172
L +M G L +AST VS++ G F QG S+H + L NE + + +++
Sbjct: 189 LLDMQDHGGLRPNASTLVSLLPLLAQHGALF-QGTSIHAYCLRACLEQNEEQVLIGTALL 247
Query: 173 SMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQM--------RR 224
MYAK ++ A +F + + V+W+ +IGG+V + EAF L M
Sbjct: 248 DMYAKCKQLVYACRVFHGMPVRNDVTWSALIGGFVLCDRMTEAFNLFKDMLVEGLCFLSA 307
Query: 225 MSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLEL 284
SV L V CA + +L + +H+L+ KSG + + N L+SMY K G +
Sbjct: 308 TSVASALRV-------CASLADLHMGTQLHALIAKSGIHADLTASNSLLSMYAKAGLINE 360
Query: 285 ARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAE 344
A FD + K + +++ G Q G EA +FK++ ++ P+ AT+ + + AC+
Sbjct: 361 ATMFFDEIAVKDTISYGALLSGCVQNGKAEEAFLVFKKMQACNMEPDIATMVSLIPACSH 420
Query: 345 LGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAM 404
L +L GK +++ GL + SLI M++KCG+I+ +++VF+++P +D+ W+ M
Sbjct: 421 LAALQHGKCSHGSVIIRGLALETSICNSLIDMYAKCGKIDLSRQVFDKMPARDVVSWNTM 480
Query: 405 INGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNF 464
I GY IHG+G +A LF M++ +G PD V + +++ACSHSG+V +G +F +M +
Sbjct: 481 IAGYGIHGLGKEATTLFLGMKN-QGFAPDDVTFICLIAACSHSGLVTEGKHWFDTMTHKY 539
Query: 465 GIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYA 524
GI P +EHY+C+VDLL R G D A + I MP++ +VW LL AC H N++LG+
Sbjct: 540 GILPRMEHYICMVDLLARGGLLDEAYQFIQSMPLKADVRVWGALLGACRIHKNIDLGKQV 599
Query: 525 AKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQV 584
++ + L P TGN++L++N+F++AG + EAA R + + K PG+S +EI+GS+
Sbjct: 600 SRIIQKLGPEGTGNFVLLSNIFSAAGRFDEAAEVRIIQKVKGFKKSPGYSWIEINGSLHA 659
Query: 585 FVAGDRSHHLSVDIRKTLKELHIKLLEAGYIAEADIV 621
FV GD+SH S DI L + + + + GY A+ V
Sbjct: 660 FVGGDQSHPCSRDIYHELDNIMVDIKKLGYQADTSFV 696
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 72/233 (30%), Positives = 117/233 (50%), Gaps = 5/233 (2%)
Query: 280 GDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTL 339
G L LAR+VFD + + ++I Y+ LG A++L++ +L+ V PN+ T L
Sbjct: 48 GQLALARQVFDRIPAPDARAYNALIRAYSWLGPFHAAIDLYRSMLRFRVAPNKYTFPFVL 107
Query: 340 SACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLA 399
AC+ L L G+ I + GL ++ V T+LI ++ +C R A+ VF ++P +D+
Sbjct: 108 KACSALVDLRAGRTIHAHAAAAGLHTDLFVSTALIDLYIRCARFGPARNVFAKMPMRDVV 167
Query: 400 VWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKS 459
W+AM+ GYA HGM A+ MQ GL+P+A S+L + G + G S +
Sbjct: 168 AWNAMLAGYANHGMYHHAIAHLLDMQDHGGLRPNASTLVSLLPLLAQHGALFQGTS-IHA 226
Query: 460 MQSNFGIEPSIEHYL---CLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLL 509
+E + E L L+D+ + + A + H MPV W+ L+
Sbjct: 227 YCLRACLEQNEEQVLIGTALLDMYAKCKQLVYACRVFHGMPVRNDV-TWSALI 278
Score = 118 bits (296), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 92/346 (26%), Positives = 160/346 (46%), Gaps = 8/346 (2%)
Query: 179 GKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLI 238
G++ AR +FD I ++ +I Y +G + A L M R V P+ F ++
Sbjct: 48 GQLALARQVFDRIPAPDARAYNALIRAYSWLGPFHAAIDLYRSMLRFRVAPNKYTFPFVL 107
Query: 239 LGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVF 298
C+ + +L ++H+ +G + + + L+ +Y +C AR VF + + V
Sbjct: 108 KACSALVDLRAGRTIHAHAAAAGLHTDLFVSTALIDLYIRCARFGPARNVFAKMPMRDVV 167
Query: 299 LWTSMIGGYAQLGYPSEAV-NLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEY 357
W +M+ GYA G A+ +L +RPN +TL + L A+ G+L +G I Y
Sbjct: 168 AWNAMLAGYANHGMYHHAIAHLLDMQDHGGLRPNASTLVSLLPLLAQHGALFQGTSIHAY 227
Query: 358 IVLNGLESNRQ---VQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMG 414
+ LE N + + T+L+ M++KC ++ A VF +P ++ WSA+I G+ +
Sbjct: 228 CLRACLEQNEEQVLIGTALLDMYAKCKQLVYACRVFHGMPVRNDVTWSALIGGFVLCDRM 287
Query: 415 DQALNLFYKMQHVEGLK-PDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHY 473
+A NLF M VEGL A S L C+ + G ++ + GI +
Sbjct: 288 TEAFNLFKDML-VEGLCFLSATSVASALRVCASLADLHMGTQ-LHALIAKSGIHADLTAS 345
Query: 474 LCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVE 519
L+ + +AG + A E+ V+ + LLS C+++ E
Sbjct: 346 NSLLSMYAKAGLINEATMFFDEIAVK-DTISYGALLSGCVQNGKAE 390
>gi|15237421|ref|NP_197188.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174141|sp|Q9LFL5.1|PP390_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g16860
gi|9755687|emb|CAC01699.1| putative protein [Arabidopsis thaliana]
gi|332004967|gb|AED92350.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 850
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 232/670 (34%), Positives = 353/670 (52%), Gaps = 58/670 (8%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+IR+ +NG + L + M +++TFP V KAC I+S+ G+ H+ L G
Sbjct: 98 LIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHALSLVTG 157
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F + FV L+ MYS+C +RKV DEM V VVSWNSII ++++ A+ +
Sbjct: 158 FISNVFVGNALVAMYSRCRSLSDARKVFDEMSVW--DVVSWNSIIESYAKLGKPKVALEM 215
Query: 121 LKEMW-VLGLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMY 175
M G T V+V+ C + G +HC ++ N + N ++ MY
Sbjct: 216 FSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMF-VGNCLVDMY 274
Query: 176 AKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVN---------------------- 213
AK G ++EA ++F + +VSW ++ GY +G
Sbjct: 275 AKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWS 334
Query: 214 -------------EAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSL---- 256
EA G+C QM + P+ V ++++ GCA VG L +H
Sbjct: 335 AAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKY 394
Query: 257 ---LLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAV--LEKSVFLWTSMIGGYAQLG 311
L K+G+ +E+ + N L+ MY KC ++ AR +FD++ E+ V WT MIGGY+Q G
Sbjct: 395 PIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHG 454
Query: 312 YPSEAVNLFKRLLK--TSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQ- 368
++A+ L + + RPN T++ L ACA L +L GK+I Y + N +
Sbjct: 455 DANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPLF 514
Query: 369 VQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVE 428
V LI M++KCG I+ A+ VF+ + K+ W++++ GY +HG G++AL +F +M+ +
Sbjct: 515 VSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRI- 573
Query: 429 GLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDL 488
G K D V +L ACSHSGM+D G+ +F M++ FG+ P EHY CLVDLLGRAGR +
Sbjct: 574 GFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLLGRAGRLNA 633
Query: 489 ALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTS 548
AL+ I EMP+E VW LS C H VELGEYAA+ + L G+Y L++NL+ +
Sbjct: 634 ALRLIEEMPMEPPPVVWVAFLSCCRIHGKVELGEYAAEKITELASNHDGSYTLLSNLYAN 693
Query: 549 AGMWKEAATARGLMDDRRLTKEPGWSQVE-IDGSVQVFVAGDRSHHLSVDIRKTLKELHI 607
AG WK+ R LM + + K PG S VE I G+ FV GD++H + +I + L +
Sbjct: 694 AGRWKDVTRIRSLMRHKGVKKRPGCSWVEGIKGTTTFFV-GDKTHPHAKEIYQVLLDHMQ 752
Query: 608 KLLEAGYIAE 617
++ + GY+ E
Sbjct: 753 RIKDIGYVPE 762
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 134/532 (25%), Positives = 228/532 (42%), Gaps = 56/532 (10%)
Query: 34 PLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPV 93
P + C I+ + K +H +L G + + LI Y + +L P
Sbjct: 32 PPFIHKCKTISQV---KLIHQKLLSFGILT-LNLTSHLISTYISVGCLSHAVSLLRRFPP 87
Query: 94 RLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGC----SFRQGI 149
V WNS+I ++ ++ + + M L TF V C S R G
Sbjct: 88 SDAGVYHWNSLIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGE 147
Query: 150 SMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNV 209
S H G ++N + + N++++MY++ +++AR +FDE+ +VSW +II Y +
Sbjct: 148 SAHALSLVTGFISN-VFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKL 206
Query: 210 GNVNEAFGLCNQM-RRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPL 268
G A + ++M PD + +N++ CA +G L +H + S +
Sbjct: 207 GKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFV 266
Query: 269 DNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLF-------- 320
N LV MY KCG ++ A VF + K V W +M+ GY+Q+G +AV LF
Sbjct: 267 GNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKI 326
Query: 321 ---------------------------KRLLKTSVRPNEATLATTLSACAELGSLSKGKE 353
+++L + ++PNE TL + LS CA +G+L GKE
Sbjct: 327 KMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKE 386
Query: 354 IEEYIV-------LNGLESNRQVQTSLIHMFSKCGRINKAKEVFERV--PDKDLAVWSAM 404
I Y + NG V LI M++KC +++ A+ +F+ + ++D+ W+ M
Sbjct: 387 IHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVM 446
Query: 405 INGYAIHGMGDQALNLFYKMQHVE-GLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSN 463
I GY+ HG ++AL L +M + +P+A + L AC+ + G N
Sbjct: 447 IGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRN 506
Query: 464 FGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKH 515
+ CL+D+ + G A M + + W L++ H
Sbjct: 507 QQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEV-TWTSLMTGYGMH 557
>gi|225447423|ref|XP_002276196.1| PREDICTED: pentatricopeptide repeat-containing protein At3g12770
[Vitis vinifera]
gi|296081235|emb|CBI17979.3| unnamed protein product [Vitis vinifera]
Length = 742
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 212/575 (36%), Positives = 341/575 (59%), Gaps = 9/575 (1%)
Query: 51 RVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSR 110
++H+ ++ G + F+ T ++ + +RKV DE P SV WN+II +S
Sbjct: 89 QIHAQLVVSGLVESGFLVTKFVNASWNIGEIGYARKVFDEFPEP--SVFLWNAIIRGYSS 146
Query: 111 ACLNDEAILVLKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIP 166
+AI + M G+ T V+ CS G +H +++LG +++
Sbjct: 147 HNFFGDAIEMYSRMQASGVNPDGFTLPCVLKACSGVPVLEVGKRVHGQIFRLGF-ESDVF 205
Query: 167 LANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMS 226
+ N ++++YAK G+V +AR +F+ + + +IVSWT++I GY G EA + QMR+ +
Sbjct: 206 VQNGLVALYAKCGRVEQARIVFEGLDDRNIVSWTSMISGYGQNGLPMEALRIFGQMRQRN 265
Query: 227 VTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELAR 286
V PD + ++++ V +L S+H ++K G E L L +MY KCG + +AR
Sbjct: 266 VKPDWIALVSVLRAYTDVEDLEQGKSIHGCVVKMGLEFEPDLLISLTAMYAKCGQVMVAR 325
Query: 287 RVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELG 346
FD + +V +W +MI GYA+ GY +EAV LF+ ++ ++R + T+ + + ACA++G
Sbjct: 326 SFFDQMEIPNVMMWNAMISGYAKNGYTNEAVGLFQEMISKNIRTDSITVRSAILACAQVG 385
Query: 347 SLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMIN 406
SL K + +YI ++ V T+LI MF+KCG ++ A+EVF+R DKD+ VWSAMI
Sbjct: 386 SLDLAKWMGDYINKTEYRNDVFVNTALIDMFAKCGSVDLAREVFDRTLDKDVVVWSAMIV 445
Query: 407 GYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGI 466
GY +HG G A++LFY M+ G+ P+ V + +L+AC+HSG+V++G F SM+ +GI
Sbjct: 446 GYGLHGRGQDAIDLFYAMKQA-GVCPNDVTFVGLLTACNHSGLVEEGWELFHSMKY-YGI 503
Query: 467 EPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAK 526
E +HY C+VDLLGR+G + A I MP+E VW LL AC + +V LGEYAA+
Sbjct: 504 EARHQHYACVVDLLGRSGHLNEAYDFITTMPIEPGVSVWGALLGACKIYRHVTLGEYAAE 563
Query: 527 NLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFV 586
L +L+P +TG+Y+ ++NL+ S+ +W A R LM ++ L+K+ G+S +EI+G +Q F
Sbjct: 564 QLFSLDPFNTGHYVQLSNLYASSRLWDSVAKVRILMREKGLSKDLGYSLIEINGKLQAFR 623
Query: 587 AGDRSHHLSVDIRKTLKELHIKLLEAGYIAEADIV 621
GD+SH +I + L+ L +L EAG+I + V
Sbjct: 624 VGDKSHPRFKEIFEELESLERRLKEAGFIPHIESV 658
Score = 251 bits (642), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 141/416 (33%), Positives = 232/416 (55%), Gaps = 8/416 (1%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+IR +++ F + + YS M +GV+ + FT P VLKAC+ + + GKRVH + ++G
Sbjct: 140 IIRGYSSHNFFGDAIEMYSRMQASGVNPDGFTLPCVLKACSGVPVLEVGKRVHGQIFRLG 199
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F+ D FVQ GL+ +Y+KC +R V + + R++VSW S+IS + + L EA+ +
Sbjct: 200 FESDVFVQNGLVALYAKCGRVEQARIVFEGLDD--RNIVSWTSMISGYGQNGLPMEALRI 257
Query: 121 LKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
+M ++ VSV+ + QG S+H CV K+G L E L S+ +MYA
Sbjct: 258 FGQMRQRNVKPDWIALVSVLRAYTDVEDLEQGKSIHGCVVKMG-LEFEPDLLISLTAMYA 316
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K G+V ARS FD++ +++ W +I GY G NEA GL +M ++ D + +
Sbjct: 317 KCGQVMVARSFFDQMEIPNVMMWNAMISGYAKNGYTNEAVGLFQEMISKNIRTDSITVRS 376
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
IL CAQVG+L LA M + K+ Y N+ ++ L+ M+ KCG ++LAR VFD L+K
Sbjct: 377 AILACAQVGSLDLAKWMGDYINKTEYRNDVFVNTALIDMFAKCGSVDLAREVFDRTLDKD 436
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEE 356
V +W++MI GY G +A++LF + + V PN+ T L+AC G + +G E+
Sbjct: 437 VVVWSAMIVGYGLHGRGQDAIDLFYAMKQAGVCPNDVTFVGLLTACNHSGLVEEGWELFH 496
Query: 357 YIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVP-DKDLAVWSAMINGYAIH 411
+ G+E+ Q ++ + + G +N+A + +P + ++VW A++ I+
Sbjct: 497 SMKYYGIEARHQHYACVVDLLGRSGHLNEAYDFITTMPIEPGVSVWGALLGACKIY 552
>gi|413923915|gb|AFW63847.1| hypothetical protein ZEAMMB73_561595 [Zea mays]
Length = 1274
Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust.
Identities = 222/637 (34%), Positives = 358/637 (56%), Gaps = 27/637 (4%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+IR + G F + Y SML+ V N +TFP VLKAC+ + + G+ +H+H G
Sbjct: 71 LIRAYSWLGPFHAAIDLYRSMLRFRVAPNKYTFPFVLKACSALVDLRAGRTIHAHAAAAG 130
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
D FV T LID+Y +C+ F +R V +MP +R VV+WN++++ ++ + AI
Sbjct: 131 LHTDLFVSTALIDLYIRCARFGPARNVFAKMP--MRDVVAWNAMLAGYANHGMYHHAIAH 188
Query: 121 LKEMWVLG-LELSASTFVSVVS-----GCSFRQGISMHCCVYKLGLLNNE--IPLANSVM 172
L +M G L +AST VS++ G F QG S+H + L NE + + +++
Sbjct: 189 LLDMQDHGGLRPNASTLVSLLPLLAQHGALF-QGTSIHAYCLRACLEQNEEQVLIGTALL 247
Query: 173 SMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQM--------RR 224
MYAK ++ A +F + + V+W+ +IGG+V + EAF L M
Sbjct: 248 DMYAKCKQLVYACRVFHGMPVRNDVTWSALIGGFVLCDRMTEAFNLFKDMLVEGLCFLSA 307
Query: 225 MSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLEL 284
SV L V CA + +L + +H+L+ KSG + + N L+SMY K G +
Sbjct: 308 TSVASALRV-------CASLADLHMGTQLHALIAKSGIHADLTASNSLLSMYAKAGLINE 360
Query: 285 ARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAE 344
A FD + K + +++ G Q G EA +FK++ ++ P+ AT+ + + AC+
Sbjct: 361 ATMFFDEIAVKDTISYGALLSGCVQNGKAEEAFLVFKKMQACNMEPDIATMVSLIPACSH 420
Query: 345 LGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAM 404
L +L GK +++ GL + SLI M++KCG+I+ +++VF+++P +D+ W+ M
Sbjct: 421 LAALQHGKCSHGSVIIRGLALETSICNSLIDMYAKCGKIDLSRQVFDKMPARDVVSWNTM 480
Query: 405 INGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNF 464
I GY IHG+G +A LF M++ +G PD V + +++ACSHSG+V +G +F +M +
Sbjct: 481 IAGYGIHGLGKEATTLFLGMKN-QGFAPDDVTFICLIAACSHSGLVTEGKHWFDTMTHKY 539
Query: 465 GIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYA 524
GI P +EHY+C+VDLL R G D A + I MP++ +VW LL AC H N++LG+
Sbjct: 540 GILPRMEHYICMVDLLARGGLLDEAYQFIQSMPLKADVRVWGALLGACRIHKNIDLGKQV 599
Query: 525 AKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQV 584
++ + L P TGN++L++N+F++AG + EAA R + + K PG+S +EI+GS+
Sbjct: 600 SRIIQKLGPEGTGNFVLLSNIFSAAGRFDEAAEVRIIQKVKGFKKSPGYSWIEINGSLHA 659
Query: 585 FVAGDRSHHLSVDIRKTLKELHIKLLEAGYIAEADIV 621
FV GD+SH S DI L + + + + GY A+ V
Sbjct: 660 FVGGDQSHPCSRDIYHELDNIMVDIKKLGYQADTSFV 696
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 72/233 (30%), Positives = 117/233 (50%), Gaps = 5/233 (2%)
Query: 280 GDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTL 339
G L LAR+VFD + + ++I Y+ LG A++L++ +L+ V PN+ T L
Sbjct: 48 GQLALARQVFDRIPAPDARAYNALIRAYSWLGPFHAAIDLYRSMLRFRVAPNKYTFPFVL 107
Query: 340 SACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLA 399
AC+ L L G+ I + GL ++ V T+LI ++ +C R A+ VF ++P +D+
Sbjct: 108 KACSALVDLRAGRTIHAHAAAAGLHTDLFVSTALIDLYIRCARFGPARNVFAKMPMRDVV 167
Query: 400 VWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKS 459
W+AM+ GYA HGM A+ MQ GL+P+A S+L + G + G S +
Sbjct: 168 AWNAMLAGYANHGMYHHAIAHLLDMQDHGGLRPNASTLVSLLPLLAQHGALFQGTS-IHA 226
Query: 460 MQSNFGIEPSIEHYL---CLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLL 509
+E + E L L+D+ + + A + H MPV W+ L+
Sbjct: 227 YCLRACLEQNEEQVLIGTALLDMYAKCKQLVYACRVFHGMPVRNDV-TWSALI 278
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 92/346 (26%), Positives = 160/346 (46%), Gaps = 8/346 (2%)
Query: 179 GKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLI 238
G++ AR +FD I ++ +I Y +G + A L M R V P+ F ++
Sbjct: 48 GQLALARQVFDRIPAPDARAYNALIRAYSWLGPFHAAIDLYRSMLRFRVAPNKYTFPFVL 107
Query: 239 LGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVF 298
C+ + +L ++H+ +G + + + L+ +Y +C AR VF + + V
Sbjct: 108 KACSALVDLRAGRTIHAHAAAAGLHTDLFVSTALIDLYIRCARFGPARNVFAKMPMRDVV 167
Query: 299 LWTSMIGGYAQLGYPSEAV-NLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEY 357
W +M+ GYA G A+ +L +RPN +TL + L A+ G+L +G I Y
Sbjct: 168 AWNAMLAGYANHGMYHHAIAHLLDMQDHGGLRPNASTLVSLLPLLAQHGALFQGTSIHAY 227
Query: 358 IVLNGLESNRQ---VQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMG 414
+ LE N + + T+L+ M++KC ++ A VF +P ++ WSA+I G+ +
Sbjct: 228 CLRACLEQNEEQVLIGTALLDMYAKCKQLVYACRVFHGMPVRNDVTWSALIGGFVLCDRM 287
Query: 415 DQALNLFYKMQHVEGLK-PDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHY 473
+A NLF M VEGL A S L C+ + G ++ + GI +
Sbjct: 288 TEAFNLFKDML-VEGLCFLSATSVASALRVCASLADLHMGTQ-LHALIAKSGIHADLTAS 345
Query: 474 LCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVE 519
L+ + +AG + A E+ V+ + LLS C+++ E
Sbjct: 346 NSLLSMYAKAGLINEATMFFDEIAVK-DTISYGALLSGCVQNGKAE 390
>gi|328774763|gb|AEB39781.1| pentatricopeptide repeat protein 79 [Funaria hygrometrica]
Length = 820
Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust.
Identities = 208/625 (33%), Positives = 354/625 (56%), Gaps = 8/625 (1%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI + G +E + ++ M Q G+ + FTF +L AC++ ++ G+ VH V++ G
Sbjct: 116 MISGYAHRGLGQEAFNLFTLMQQEGLEPDKFTFVSILSACSSPAALNWGREVHVRVMEAG 175
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+A V LI MY+KC +R+V D M R VSW ++ A++ + E++
Sbjct: 176 LANNATVGNALISMYAKCGSVRDARRVFDAMASR--DEVSWTTLTGAYAESGYAQESLKT 233
Query: 121 LKEMWVLGLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
M G+ S T+++V+S C + +G +H + + ++++ ++ ++ MY
Sbjct: 234 YHAMLQEGVRPSRITYMNVLSACGSLAALEKGKQIHAQIVE-SEHHSDVRVSTALTKMYI 292
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K G V +AR +F+ + +++W T+IGG V+ G + EA G+ ++M + V PD V +L
Sbjct: 293 KCGAVKDAREVFECLPNRDVIAWNTMIGGLVDSGQLEEAHGMFHRMLKECVAPDRVTYLA 352
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
++ CA+ G L +H+ +K G ++ N L++MY+K G ++ AR+VFD + ++
Sbjct: 353 ILSACARPGGLACGKEIHARAVKDGLVSDVRFGNALINMYSKAGSMKDARQVFDRMPKRD 412
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEE 356
V WT+++GGYA G E+ + FK++L+ V N+ T L AC+ +L GKEI
Sbjct: 413 VVSWTALVGGYADCGQVVESFSTFKKMLQQGVEANKITYMCVLKACSNPVALKWGKEIHA 472
Query: 357 YIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQ 416
+V G+ ++ V +L+ M+ KCG + A V E + +D+ W+ +I G A +G G +
Sbjct: 473 EVVKAGIFADLAVANALMSMYFKCGSVEDAIRVSEGMSTRDVVTWNTLIGGLAQNGRGLE 532
Query: 417 ALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCL 476
AL F M+ E ++P+A + +++SAC +V++G F SM+ ++GI P+ +HY C+
Sbjct: 533 ALQKFEVMKS-EEMRPNATTFVNVMSACRVRNLVEEGRRQFASMRKDYGIVPTEKHYACM 591
Query: 477 VDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGST 536
VD+L RAG A I MP + A +W LL+AC H NVE+GE AA+ L L P +
Sbjct: 592 VDILARAGHLGEAEDVILTMPFKPSAAMWGALLAACRAHGNVEIGEQAAEQCLKLEPQNA 651
Query: 537 GNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSV 596
G Y+ ++ ++ +AGMW++ A R LM +R + KEPG S +E+ G V FVAGD+SH +
Sbjct: 652 GTYVSLSFIYAAAGMWRDVAKLRKLMKERGVKKEPGRSWIEVAGEVHSFVAGDQSHPRTE 711
Query: 597 DIRKTLKELHIKLLEAGYIAEADIV 621
+I L+ L ++ GY+ + V
Sbjct: 712 EIYSELEALTKQIKSLGYVPDTRFV 736
Score = 224 bits (572), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 124/385 (32%), Positives = 206/385 (53%), Gaps = 13/385 (3%)
Query: 120 VLKEMWVLGLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMY 175
VL+ + G ++ + +V ++ C G +H + + G+ N + + N+++ +Y
Sbjct: 31 VLQYLHQKGSQVDSYDYVKLLQSCVKAKDLAVGKQVHEHILRFGMKPN-VYIINTLLKLY 89
Query: 176 AKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFL 235
G VNEAR +FD+ S+VSW +I GY + G EAF L M++ + PD F+
Sbjct: 90 VHCGSVNEARRLFDKFSNKSVVSWNVMISGYAHRGLGQEAFNLFTLMQQEGLEPDKFTFV 149
Query: 236 NLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEK 295
+++ C+ L +H ++++G N + N L+SMY KCG + ARRVFDA+ +
Sbjct: 150 SILSACSSPAALNWGREVHVRVMEAGLANNATVGNALISMYAKCGSVRDARRVFDAMASR 209
Query: 296 SVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIE 355
WT++ G YA+ GY E++ + +L+ VRP+ T LSAC L +L KGK+I
Sbjct: 210 DEVSWTTLTGAYAESGYAQESLKTYHAMLQEGVRPSRITYMNVLSACGSLAALEKGKQIH 269
Query: 356 EYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGD 415
IV + S+ +V T+L M+ KCG + A+EVFE +P++D+ W+ MI G G +
Sbjct: 270 AQIVESEHHSDVRVSTALTKMYIKCGAVKDAREVFECLPNRDVIAWNTMIGGLVDSGQLE 329
Query: 416 QALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNF---GIEPSIEH 472
+A +F++M E + PD V Y +ILSAC+ G GL+ K + + G+ +
Sbjct: 330 EAHGMFHRMLK-ECVAPDRVTYLAILSACARPG----GLACGKEIHARAVKDGLVSDVRF 384
Query: 473 YLCLVDLLGRAGRFDLALKTIHEMP 497
L+++ +AG A + MP
Sbjct: 385 GNALINMYSKAGSMKDARQVFDRMP 409
>gi|168068035|ref|XP_001785902.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162662428|gb|EDQ49285.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 908
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 226/629 (35%), Positives = 356/629 (56%), Gaps = 15/629 (2%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACA--NINSIWDGKRVHSHVLK 58
MI +G +E S + M + G N T+ +L A A + ++ K VH H K
Sbjct: 203 MIGGLAQHGRGQEAFSLFLQMERGGCLPNLTTYLSILNASAITSTGALEWVKEVHKHAGK 262
Query: 59 VGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAI 118
GF D V LI MY+KC +R V D M R V+SWN++I ++ EA
Sbjct: 263 AGFISDLRVGNALIHMYAKCGSIDDARLVFDGMCDR--DVISWNAMIGGLAQNGCGHEAF 320
Query: 119 LVLKEMWVLGLELSASTFVSV----VSGCSFRQGISMHCCVYKLGLLNNEIPLANSVMSM 174
+ +M G ++T++S+ VS ++ +H ++GL+++ + + ++ + M
Sbjct: 321 TIFLKMQQEGFVPDSTTYLSLLNTHVSTGAWEWVKEVHKHAVEVGLVSD-LRVGSAFVHM 379
Query: 175 YAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVF 234
Y + G +++A+ IFD++ ++ +W +IGG EA L QMRR PD F
Sbjct: 380 YIRCGSIDDAQLIFDKLAVRNVTTWNAMIGGVAQQKCGREALSLFLQMRREGFFPDATTF 439
Query: 235 LNLILGCAQVGN--LFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAV 292
+N++ A VG L +HS + +G + + N LV MY KCG+ A++VFD +
Sbjct: 440 VNIL--SANVGEEALEWVKEVHSYAIDAGLVDL-RVGNALVHMYAKCGNTMYAKQVFDDM 496
Query: 293 LEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGK 352
+E++V WT MI G AQ G EA +LF ++L+ + P+ T + LSACA G+L K
Sbjct: 497 VERNVTTWTVMISGLAQHGCGHEAFSLFLQMLREGIVPDATTYVSILSACASTGALEWVK 556
Query: 353 EIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHG 412
E+ + V GL S+ +V +L+HM++KCG ++ A+ VF+ + ++D+ W+ MI G A HG
Sbjct: 557 EVHSHAVNAGLVSDLRVGNALVHMYAKCGSVDDARRVFDDMLERDVYSWTVMIGGLAQHG 616
Query: 413 MGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEH 472
G AL+LF KM+ +EG KP+ + ++LSACSH+G+VD+G F S+ ++GIEP++EH
Sbjct: 617 RGLDALDLFVKMK-LEGFKPNGYSFVAVLSACSHAGLVDEGRRQFLSLTQDYGIEPTMEH 675
Query: 473 YLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLN 532
Y C+VDLLGRAG+ + A I MP+E W LL AC+ + N+E+ E+AAK L L
Sbjct: 676 YTCMVDLLGRAGQLEEAKHFILNMPIEPGDAPWGALLGACVTYGNLEMAEFAAKERLKLK 735
Query: 533 PGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSH 592
P S Y+L++N++ + G W++ R +M R + KEPG S +E+D + FV GD SH
Sbjct: 736 PKSASTYVLLSNIYAATGNWEQKLLVRSMMQRRGIRKEPGRSWIEVDNQIHSFVVGDTSH 795
Query: 593 HLSVDIRKTLKELHIKLLEAGYIAEADIV 621
S +I LK+L +L GY+ + +V
Sbjct: 796 PESKEIYAKLKDLIKRLKAEGYVPDTRLV 824
Score = 253 bits (647), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 160/524 (30%), Positives = 271/524 (51%), Gaps = 19/524 (3%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI G E+ + YS M + G N T+ +LKAC + S+ GK++H+H+++ G
Sbjct: 1 MIGGYAEYGYAEDAMKVYSQMRREGGQPNEITYLSILKACCSPVSLKWGKKIHAHIIQSG 60
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
FQ D V+T L++MY KC ++ + D+M R+V+SW +I + EA
Sbjct: 61 FQSDVRVETALVNMYVKCGSIDDAQLIFDKMVE--RNVISWTVMIGGLAHYGRGQEAFHR 118
Query: 121 LKEMWVLGLELSASTFVSVV----SGCSFRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
+M G ++ T+VS++ S + +H GL ++ + N+++ MYA
Sbjct: 119 FLQMQREGFIPNSYTYVSILNANASAGALEWVKEVHSHAVNAGLA-LDLRVGNALVHMYA 177
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K G +++AR +FD + E I SWT +IGG G EAF L QM R P+L +L+
Sbjct: 178 KSGSIDDARVVFDGMVERDIFSWTVMIGGLAQHGRGQEAFSLFLQMERGGCLPNLTTYLS 237
Query: 237 LILGCA--QVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLE 294
++ A G L +H K+G+ ++ + N L+ MY KCG ++ AR VFD + +
Sbjct: 238 ILNASAITSTGALEWVKEVHKHAGKAGFISDLRVGNALIHMYAKCGSIDDARLVFDGMCD 297
Query: 295 KSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEI 354
+ V W +MIGG AQ G EA +F ++ + P+ T + L+ G+ KE+
Sbjct: 298 RDVISWNAMIGGLAQNGCGHEAFTIFLKMQQEGFVPDSTTYLSLLNTHVSTGAWEWVKEV 357
Query: 355 EEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMG 414
++ V GL S+ +V ++ +HM+ +CG I+ A+ +F+++ +++ W+AMI G A G
Sbjct: 358 HKHAVEVGLVSDLRVGSAFVHMYIRCGSIDDAQLIFDKLAVRNVTTWNAMIGGVAQQKCG 417
Query: 415 DQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYL 474
+AL+LF +M+ EG PDA + +ILSA + ++ L + K + S + I+ +
Sbjct: 418 REALSLFLQMRR-EGFFPDATTFVNILSA----NVGEEALEWVKEVHS-YAIDAGLVDLR 471
Query: 475 ---CLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKH 515
LV + + G A + +M VE W ++S +H
Sbjct: 472 VGNALVHMYAKCGNTMYAKQVFDDM-VERNVTTWTVMISGLAQH 514
>gi|449470293|ref|XP_004152852.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g30700-like [Cucumis sativus]
Length = 788
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 217/622 (34%), Positives = 360/622 (57%), Gaps = 10/622 (1%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQ-TGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKV 59
+IR ++NG + ++ Y+ + + T + ++FT+ + A + + G +H+H +
Sbjct: 83 LIRGFSDNGLPKSSIFLYTHLRKKTNLRPDNFTYAFAISAASRLEDERVGVLLHAHSIVD 142
Query: 60 GFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAIL 119
G + FV + ++D+Y K + +RKV D MP R V WN++IS SR +++I
Sbjct: 143 GVASNLFVGSAIVDLYFKFTRAELARKVFDVMPER--DTVLWNTMISGFSRNSYFEDSIR 200
Query: 120 VLKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMY 175
V +M +GL ++T +V++ + +R G+ + C K GL ++++ + ++S+Y
Sbjct: 201 VFVDMLDVGLSFDSTTLATVLTAVAELQEYRLGMGIQCLASKKGL-HSDVYVLTGLISLY 259
Query: 176 AKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFL 235
+K GK + R +FD+I + ++S+ +I GY A L ++ + +
Sbjct: 260 SKCGKSCKGRILFDQIDQPDLISYNAMISGYTFNHETESAVTLFRELLASGQRVNSSTLV 319
Query: 236 NLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEK 295
LI +L L+ + +L LK G + + L ++Y + +++ AR++FD EK
Sbjct: 320 GLIPVYLPFNHLQLSRLIQNLSLKIGIILQPSVSTALTTVYCRLNEVQFARQLFDESPEK 379
Query: 296 SVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIE 355
S+ W +MI GY Q G A++LF+ ++ + PN T+ + LSACA+LG+LS GK +
Sbjct: 380 SLASWNAMISGYTQNGLTDRAISLFQEMMP-QLSPNPVTVTSILSACAQLGALSIGKWVH 438
Query: 356 EYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGD 415
I LESN V T+L+ M++KCG I +A+++F+ + DK++ W+AMI GY +HG G
Sbjct: 439 GLIKSERLESNVYVSTALVDMYAKCGSIVEARQLFDLMVDKNVVTWNAMITGYGLHGHGK 498
Query: 416 QALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLC 475
+AL LFY+M G+ P V + SIL ACSHSG+V +G F SM +N+G +P EHY C
Sbjct: 499 EALKLFYEMLQ-SGIPPTGVTFLSILYACSHSGLVSEGNEIFHSMANNYGFQPMSEHYAC 557
Query: 476 LVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGS 535
+VD+LGRAG+ AL+ I MP+E VW LL ACM H N E+ A+K L L+P +
Sbjct: 558 MVDILGRAGQLTNALEFIERMPLEPGPAVWGALLGACMIHKNTEMANVASKRLFQLDPEN 617
Query: 536 TGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLS 595
G Y+L++N++++ + +AA+ R ++ R+L K PG + +EID VF +GDRSH +
Sbjct: 618 VGYYVLLSNIYSTDRNFPKAASVRQVVKKRKLAKTPGCTLIEIDDQQYVFTSGDRSHPQA 677
Query: 596 VDIRKTLKELHIKLLEAGYIAE 617
I + L++L K+ EAGY AE
Sbjct: 678 TAIFEMLEKLTGKMREAGYQAE 699
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 112/215 (52%), Gaps = 3/215 (1%)
Query: 272 LVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLL-KTSVRP 330
L + G + R++F+ V + +FL+ +I G++ G P ++ L+ L KT++RP
Sbjct: 52 LTHKFFDLGAVAHVRQLFNKVSKPDLFLFNVLIRGFSDNGLPKSSIFLYTHLRKKTNLRP 111
Query: 331 NEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVF 390
+ T A +SA + L G + + +++G+ SN V ++++ ++ K R A++VF
Sbjct: 112 DNFTYAFAISAASRLEDERVGVLLHAHSIVDGVASNLFVGSAIVDLYFKFTRAELARKVF 171
Query: 391 ERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMV 450
+ +P++D +W+ MI+G++ + + ++ +F M V GL D+ ++L+A +
Sbjct: 172 DVMPERDTVLWNTMISGFSRNSYFEDSIRVFVDMLDV-GLSFDSTTLATVLTAVAELQEY 230
Query: 451 DDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGR 485
G+ + + S G+ + L+ L + G+
Sbjct: 231 RLGMG-IQCLASKKGLHSDVYVLTGLISLYSKCGK 264
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 84/178 (47%), Gaps = 12/178 (6%)
Query: 347 SLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMIN 406
+LS+ +I+ ++L+G+ + T L H F G + +++F +V DL +++ +I
Sbjct: 26 TLSQLLQIQAQLILHGIHYDLSSITKLTHKFFDLGAVAHVRQLFNKVSKPDLFLFNVLIR 85
Query: 407 GYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACS-----HSGMVDDGLSFFKSMQ 461
G++ +G+ ++ L+ ++ L+PD Y +SA S G++ S +
Sbjct: 86 GFSDNGLPKSSIFLYTHLRKKTNLRPDNFTYAFAISAASRLEDERVGVLLHAHSIVDGVA 145
Query: 462 SNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVE 519
SN + +I VDL + R +LA K MP E +W ++S ++ E
Sbjct: 146 SNLFVGSAI------VDLYFKFTRAELARKVFDVMP-ERDTVLWNTMISGFSRNSYFE 196
>gi|224120094|ref|XP_002331135.1| predicted protein [Populus trichocarpa]
gi|222872863|gb|EEF09994.1| predicted protein [Populus trichocarpa]
Length = 799
Score = 397 bits (1020), Expect = e-108, Method: Compositional matrix adjust.
Identities = 226/633 (35%), Positives = 353/633 (55%), Gaps = 19/633 (3%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+IR NG +EE + Y ML G+ N FTFP VLKAC+ + +G+ +H + ++
Sbjct: 90 LIRAYAWNGPYEEAIDLYYKMLGYGITPNRFTFPFVLKACSALKEASEGREIHCDIKRLR 149
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHS-RACLNDEAIL 119
+ + +V T L+D Y+KC +++V D+M R VV+WNS+IS S DE
Sbjct: 150 LESNVYVSTALVDFYAKCGCLDDAKEVFDKM--HKRDVVAWNSMISGFSLHEGSYDEVAR 207
Query: 120 VLKEMWVLGLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMY 175
+L +M + ++ST V V+ S R G +H + G + ++ + ++ +Y
Sbjct: 208 LLVQMQN-DVSPNSSTIVGVLPAVAQVNSLRHGKEIHGFCVRRGFVG-DVVVGTGILDVY 265
Query: 176 AKFGKVNEARSIFDEIG-ETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVF 234
K ++ AR IFD +G + V+W+ ++G YV + EA L Q+ + + D++V
Sbjct: 266 GKCQCIDYARRIFDMMGIVKNEVTWSAMVGAYVVCDFMREALELFCQL--LMLKDDVIVL 323
Query: 235 LNLILG-----CAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVF 289
+ L CA + +L +H +KSG+ + + N L+SMY KCG + A R F
Sbjct: 324 SAVTLATVIRVCANLTDLSTGTCLHCYAIKSGFVLDLMVGNTLLSMYAKCGIINGAMRFF 383
Query: 290 DAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLS 349
+ + + +T++I GY Q G E + +F + + + P +ATLA+ L ACA L L
Sbjct: 384 NEMDLRDAVSFTAIISGYVQNGNSEEGLRMFLEMQLSGINPEKATLASVLPACAHLAGLH 443
Query: 350 KGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYA 409
G Y ++ G ++ + +LI M++KCG+I+ A++VF+R+ + + W+ MI Y
Sbjct: 444 YGSCSHCYAIICGFTADTMICNALIDMYAKCGKIDTARKVFDRMHKRGIVSWNTMIIAYG 503
Query: 410 IHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPS 469
IHG+G +AL LF MQ EGLKPD V + ++SACSHSG+V +G +F +M +FGI P
Sbjct: 504 IHGIGLEALLLFDNMQS-EGLKPDDVTFICLISACSHSGLVAEGKYWFNAMTQDFGIIPR 562
Query: 470 IEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLL 529
+EHY C+VDLL RAG F I +MP+E +VW LLSAC + NVELGE +K +
Sbjct: 563 MEHYACMVDLLSRAGLFKEVHSFIEKMPLEPDVRVWGALLSACRVYKNVELGEGVSKKIQ 622
Query: 530 TLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGD 589
L P STGN++L++N++++ G W +AA R ++ K PG S +EI G V F+ G
Sbjct: 623 KLGPESTGNFVLLSNMYSAVGRWDDAAQVRFTQKEQGFEKSPGCSWIEISGVVHTFLGGG 682
Query: 590 -RSHHLSVDIRKTLKELHIKLLEAGYIAEADIV 621
RSH I L EL +++ GY AE+ V
Sbjct: 683 YRSHPQLTQISNKLDELLVEMKRLGYQAESSYV 715
Score = 208 bits (529), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 157/574 (27%), Positives = 289/574 (50%), Gaps = 60/574 (10%)
Query: 35 LVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTG-------LIDMYSKCSDFVSSRKV 87
++L++C S++ GK +H H+LK + T L+D+Y CS+ +R V
Sbjct: 14 VLLESCIQSKSLFRGKLIHQHLLKCLHRTHETNLTNFDVPFEKLVDLYIACSELKIARHV 73
Query: 88 LDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCS--- 144
D+MP R ++VV WN +I A++ +EAI + +M G+ + TF V+ CS
Sbjct: 74 FDKMPHRPKNVVLWNLLIRAYAWNGPYEEAIDLYYKMLGYGITPNRFTFPFVLKACSALK 133
Query: 145 -FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTII 203
+G +HC + +L L +N + ++ +++ YAK G +++A+ +FD++ + +V+W ++I
Sbjct: 134 EASEGREIHCDIKRLRLESN-VYVSTALVDFYAKCGCLDDAKEVFDKMHKRDVVAWNSMI 192
Query: 204 GGY-VNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGY 262
G+ ++ G+ +E L QM+ V+P+ + ++ AQV +L +H ++ G+
Sbjct: 193 SGFSLHEGSYDEVARLLVQMQN-DVSPNSSTIVGVLPAVAQVNSLRHGKEIHGFCVRRGF 251
Query: 263 NNEDPLDNLLVSMYTKCGDLELARRVFDAV-LEKSVFLWTSMIGGYAQLGYPSEAVNLFK 321
+ + ++ +Y KC ++ ARR+FD + + K+ W++M+G Y + EA+ LF
Sbjct: 252 VGDVVVGTGILDVYGKCQCIDYARRIFDMMGIVKNEVTWSAMVGAYVVCDFMREALELFC 311
Query: 322 RLLKTS---VRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFS 378
+LL + + TLAT + CA L LS G + Y + +G + V +L+ M++
Sbjct: 312 QLLMLKDDVIVLSAVTLATVIRVCANLTDLSTGTCLHCYAIKSGFVLDLMVGNTLLSMYA 371
Query: 379 KCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYT 438
KCG IN A F + +D ++A+I+GY +G ++ L +F +MQ + G+ P+
Sbjct: 372 KCGIINGAMRFFNEMDLRDAVSFTAIISGYVQNGNSEEGLRMFLEMQ-LSGINPEKATLA 430
Query: 439 SILSACSH-SGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKT----- 492
S+L AC+H +G+ S ++ F + I + L+D+ + G+ D A K
Sbjct: 431 SVLPACAHLAGLHYGSCSHCYAIICGFTADTMICN--ALIDMYAKCGKIDTARKVFDRMH 488
Query: 493 ---------------IHEMPVE-------VQAQVWAP-------LLSACMKHHNVELGEY 523
IH + +E +Q++ P L+SAC V G+Y
Sbjct: 489 KRGIVSWNTMIIAYGIHGIGLEALLLFDNMQSEGLKPDDVTFICLISACSHSGLVAEGKY 548
Query: 524 AAKNLLTLNPG---STGNYILMANLFTSAGMWKE 554
N +T + G +Y M +L + AG++KE
Sbjct: 549 WF-NAMTQDFGIIPRMEHYACMVDLLSRAGLFKE 581
>gi|449507535|ref|XP_004163058.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g30700-like [Cucumis sativus]
Length = 788
Score = 397 bits (1020), Expect = e-107, Method: Compositional matrix adjust.
Identities = 217/622 (34%), Positives = 360/622 (57%), Gaps = 10/622 (1%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQ-TGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKV 59
+IR ++NG + ++ Y+ + + T + ++FT+ + A + + G +H+H +
Sbjct: 83 LIRGFSDNGLPKSSIFLYTHLRKXTNLRPDNFTYAFAISAASRLEDERVGVLLHAHSIVD 142
Query: 60 GFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAIL 119
G + FV + ++D+Y K + +RKV D MP R V WN++IS SR +++I
Sbjct: 143 GVASNLFVGSAIVDLYFKFTRAELARKVFDVMPER--DTVLWNTMISGFSRNSYFEDSIR 200
Query: 120 VLKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMY 175
V +M +GL ++T +V++ + +R G+ + C K GL ++++ + ++S+Y
Sbjct: 201 VFVDMLDVGLSFDSTTLATVLTAVAELQEYRLGMGIQCLASKKGL-HSDVYVLTGLISLY 259
Query: 176 AKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFL 235
+K GK + R +FD+I + ++S+ +I GY A L ++ + +
Sbjct: 260 SKCGKSCKGRILFDQIDQPDLISYNAMISGYTFNHETESAVTLFRELLASGQRVNSSTLV 319
Query: 236 NLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEK 295
LI +L L+ + +L LK G + + L ++Y + +++ AR++FD EK
Sbjct: 320 GLIPVYLPFNHLQLSRLIQNLSLKIGIILQPSVSTALTTVYCRLNEVQFARQLFDESPEK 379
Query: 296 SVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIE 355
S+ W +MI GY Q G A++LF+ ++ + PN T+ + LSACA+LG+LS GK +
Sbjct: 380 SLASWNAMISGYTQNGLTDRAISLFQEMMP-QLSPNPVTVTSILSACAQLGALSIGKWVH 438
Query: 356 EYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGD 415
I LESN V T+L+ M++KCG I +A+++F+ + DK++ W+AMI GY +HG G
Sbjct: 439 GLIKSERLESNVYVSTALVDMYAKCGSIVEARQLFDLMVDKNVVTWNAMITGYGLHGHGK 498
Query: 416 QALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLC 475
+AL LFY+M G+ P V + SIL ACSHSG+V +G F SM +N+G +P EHY C
Sbjct: 499 EALKLFYEMLQ-SGIPPTGVTFLSILYACSHSGLVSEGNEIFHSMANNYGFQPMSEHYAC 557
Query: 476 LVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGS 535
+VD+LGRAG+ AL+ I MP+E VW LL ACM H N E+ A+K L L+P +
Sbjct: 558 MVDILGRAGQLTNALEFIERMPLEPGPAVWGALLGACMIHKNTEMANVASKRLFQLDPEN 617
Query: 536 TGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLS 595
G Y+L++N++++ + +AA+ R ++ R+L K PG + +EID VF +GDRSH +
Sbjct: 618 VGYYVLLSNIYSTDRNFPKAASVRQVVKKRKLAKTPGCTLIEIDDQQYVFTSGDRSHPQA 677
Query: 596 VDIRKTLKELHIKLLEAGYIAE 617
I + L++L K+ EAGY AE
Sbjct: 678 TAIFEMLEKLTGKMREAGYQAE 699
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 112/215 (52%), Gaps = 3/215 (1%)
Query: 272 LVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLK-TSVRP 330
L + G + R++F+ V + +FL+ +I G++ G P ++ L+ L K T++RP
Sbjct: 52 LTHKFFDLGAVAHVRQLFNKVSKPDLFLFNVLIRGFSDNGLPKSSIFLYTHLRKXTNLRP 111
Query: 331 NEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVF 390
+ T A +SA + L G + + +++G+ SN V ++++ ++ K R A++VF
Sbjct: 112 DNFTYAFAISAASRLEDERVGVLLHAHSIVDGVASNLFVGSAIVDLYFKFTRAELARKVF 171
Query: 391 ERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMV 450
+ +P++D +W+ MI+G++ + + ++ +F M V GL D+ ++L+A +
Sbjct: 172 DVMPERDTVLWNTMISGFSRNSYFEDSIRVFVDMLDV-GLSFDSTTLATVLTAVAELQEY 230
Query: 451 DDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGR 485
G+ + + S G+ + L+ L + G+
Sbjct: 231 RLGMG-IQCLASKKGLHSDVYVLTGLISLYSKCGK 264
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 84/178 (47%), Gaps = 12/178 (6%)
Query: 347 SLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMIN 406
+LS+ +I+ ++L+G+ + T L H F G + +++F +V DL +++ +I
Sbjct: 26 TLSQLLQIQAQLILHGIHYDLSSITKLTHKFFDLGAVAHVRQLFNKVSKPDLFLFNVLIR 85
Query: 407 GYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACS-----HSGMVDDGLSFFKSMQ 461
G++ +G+ ++ L+ ++ L+PD Y +SA S G++ S +
Sbjct: 86 GFSDNGLPKSSIFLYTHLRKXTNLRPDNFTYAFAISAASRLEDERVGVLLHAHSIVDGVA 145
Query: 462 SNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVE 519
SN + +I VDL + R +LA K MP E +W ++S ++ E
Sbjct: 146 SNLFVGSAI------VDLYFKFTRAELARKVFDVMP-ERDTVLWNTMISGFSRNSYFE 196
>gi|255585601|ref|XP_002533488.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223526650|gb|EEF28892.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 939
Score = 397 bits (1019), Expect = e-107, Method: Compositional matrix adjust.
Identities = 205/611 (33%), Positives = 340/611 (55%), Gaps = 8/611 (1%)
Query: 15 LSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDM 74
L + M + G+ + + V ++CA ++++ G ++H+H LK F D V T +DM
Sbjct: 262 LELFKEMQKVGIGVSQSIYASVFRSCAGLSALKVGTQLHAHALKCDFGSDITVGTATLDM 321
Query: 75 YSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSAS 134
Y+KC ++++ + +P S+ +N+II R EA+ + + GL +
Sbjct: 322 YAKCGSLADAQRIFNSLPKH--SLQCYNAIIVGCVRNEKGFEALQFFQLLLKSGLGFNEI 379
Query: 135 TFVSVVSGCSFRQG----ISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDE 190
+ S C+ +G +H K L +N I +ANS++ MY K ++EA +FDE
Sbjct: 380 SLSGAFSACASIKGDLDGRQLHSLSVKSTLRSN-ICVANSILDMYGKCEALSEACCMFDE 438
Query: 191 IGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLA 250
+ VSW +I + GN E L M R+ + PD + +++ C+ L
Sbjct: 439 MERRDAVSWNAVIAAHEQNGNEEETLNLFASMLRLRMEPDQFTYGSVLKACSSQQALNSG 498
Query: 251 LSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQL 310
+ +H+ ++KSG + + L+ MY KCG +E A+++ D + ++++ W ++I G+ L
Sbjct: 499 MEIHNRIIKSGLGLDSFVGGALIDMYCKCGMIEEAKKIHDRIEQQTMVSWNAIIAGFTLL 558
Query: 311 GYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQ 370
+ +A + F +LK SV+P+ T A L ACA L S+ GK+I I+ L S+ +
Sbjct: 559 KHSEDAHSFFYEMLKMSVKPDNFTYAIVLDACANLASVGLGKQIHGQIIKLELHSDVYIT 618
Query: 371 TSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGL 430
++L+ M+SKCG + + VFE+ P+KD W+AMI GYA HG+G++AL F +MQ +E +
Sbjct: 619 STLVDMYSKCGNMQDSALVFEKAPNKDFVTWNAMICGYAQHGLGEEALGYFERMQ-LENV 677
Query: 431 KPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLAL 490
+P+ + SIL AC+H G +D GL +F +M + +G+EP IEHY C++D++GR+GR AL
Sbjct: 678 RPNHATFVSILRACAHMGFIDKGLHYFNAMLTEYGLEPQIEHYSCMIDIIGRSGRISEAL 737
Query: 491 KTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSAG 550
K I EMP E A +W LLS C H N+E+ E A +L L P + IL++N++ AG
Sbjct: 738 KLIQEMPFEADAVIWRTLLSICKIHGNIEIAEKATNAILQLEPEDSSACILLSNIYADAG 797
Query: 551 MWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKELHIKLL 610
MW + + R +M +L KEPG S +E+ V F+ G+++H +I K L L ++
Sbjct: 798 MWGKVSEMRKMMRYNKLKKEPGCSWIEVKDEVHAFLVGNKTHPRYEEIYKILSVLLDEMK 857
Query: 611 EAGYIAEADIV 621
GYI + D +
Sbjct: 858 WIGYIPDIDFL 868
Score = 201 bits (510), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 130/455 (28%), Positives = 231/455 (50%), Gaps = 17/455 (3%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHG-NSFTFPLVLKACANINSIWDGKRVHSHVLKV 59
M+ NG +++ + M ++ G + TF +VLKAC+ + G +VH ++++
Sbjct: 146 MLSGFLQNGECRKSIDVFLDMGRSEEVGFDQTTFAVVLKACSVLEDGGLGIQVHGLIVRM 205
Query: 60 GFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACL-NDEAI 118
GF +D + L+DMY+KC S K+ E+PV ++ V W++II+ C+ NDE I
Sbjct: 206 GFYKDVVTGSALLDMYAKCKRLDDSLKIFSEIPV--KNWVCWSAIIA----GCVQNDEHI 259
Query: 119 L---VLKEMWVLGLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSV 171
L + KEM +G+ +S S + SV C + + G +H K ++I + +
Sbjct: 260 LGLELFKEMQKVGIGVSQSIYASVFRSCAGLSALKVGTQLHAHALKCD-FGSDITVGTAT 318
Query: 172 MSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDL 231
+ MYAK G + +A+ IF+ + + S+ + II G V EA + + + +
Sbjct: 319 LDMYAKCGSLADAQRIFNSLPKHSLQCYNAIIVGCVRNEKGFEALQFFQLLLKSGLGFNE 378
Query: 232 VVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDA 291
+ CA + +HSL +KS + + N ++ MY KC L A +FD
Sbjct: 379 ISLSGAFSACASIKGDLDGRQLHSLSVKSTLRSNICVANSILDMYGKCEALSEACCMFDE 438
Query: 292 VLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKG 351
+ + W ++I + Q G E +NLF +L+ + P++ T + L AC+ +L+ G
Sbjct: 439 MERRDAVSWNAVIAAHEQNGNEEETLNLFASMLRLRMEPDQFTYGSVLKACSSQQALNSG 498
Query: 352 KEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIH 411
EI I+ +GL + V +LI M+ KCG I +AK++ +R+ + + W+A+I G+ +
Sbjct: 499 MEIHNRIIKSGLGLDSFVGGALIDMYCKCGMIEEAKKIHDRIEQQTMVSWNAIIAGFTLL 558
Query: 412 GMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSH 446
+ A + FY+M + +KPD Y +L AC++
Sbjct: 559 KHSEDAHSFFYEMLKM-SVKPDNFTYAIVLDACAN 592
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 136/536 (25%), Positives = 261/536 (48%), Gaps = 44/536 (8%)
Query: 14 TLSTYSSMLQ--TGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGL 71
T T S++ Q T + TF +++ C++ NS+ GK+ H+ ++ GF D ++ L
Sbjct: 25 TFCTISTLQQNQTKLPTKIRTFSHIIQECSDYNSLKPGKQAHARMIVSGFIPDVYISNCL 84
Query: 72 IDMYSKCSDFVSSRKVLDEMPVR-----------------------------LRSVVSWN 102
+ MY +CS + KV ++M R R VVSWN
Sbjct: 85 MKMYLRCSHLNYAYKVFEKMSQRDVISYNTMISGYADAGEMNLANEFFYDTPKRDVVSWN 144
Query: 103 SIISAHSRACLNDEAILVLKEM-WVLGLELSASTFVSVVSGCSFRQ----GISMHCCVYK 157
S++S + ++I V +M + +TF V+ CS + GI +H + +
Sbjct: 145 SMLSGFLQNGECRKSIDVFLDMGRSEEVGFDQTTFAVVLKACSVLEDGGLGIQVHGLIVR 204
Query: 158 LGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFG 217
+G + + ++++ MYAK +++++ IF EI + V W+ II G V
Sbjct: 205 MGFYKD-VVTGSALLDMYAKCKRLDDSLKIFSEIPVKNWVCWSAIIAGCVQNDEHILGLE 263
Query: 218 LCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYT 277
L +M+++ + ++ ++ CA + L + +H+ LK + ++ + + MY
Sbjct: 264 LFKEMQKVGIGVSQSIYASVFRSCAGLSALKVGTQLHAHALKCDFGSDITVGTATLDMYA 323
Query: 278 KCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLAT 337
KCG L A+R+F+++ + S+ + ++I G + EA+ F+ LLK+ + NE +L+
Sbjct: 324 KCGSLADAQRIFNSLPKHSLQCYNAIIVGCVRNEKGFEALQFFQLLLKSGLGFNEISLSG 383
Query: 338 TLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKD 397
SACA + G+++ V + L SN V S++ M+ KC +++A +F+ + +D
Sbjct: 384 AFSACASIKGDLDGRQLHSLSVKSTLRSNICVANSILDMYGKCEALSEACCMFDEMERRD 443
Query: 398 LAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFF 457
W+A+I + +G ++ LNLF M + ++PD Y S+L ACS ++ G+
Sbjct: 444 AVSWNAVIAAHEQNGNEEETLNLFASMLRLR-MEPDQFTYGSVLKACSSQQALNSGMEIH 502
Query: 458 -KSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQV-WAPLLSA 511
+ ++S G++ + L+D+ + G + A K IH+ +E Q V W +++
Sbjct: 503 NRIIKSGLGLDSFVGG--ALIDMYCKCGMIEEA-KKIHD-RIEQQTMVSWNAIIAG 554
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 80/312 (25%), Positives = 164/312 (52%), Gaps = 13/312 (4%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+I NG+ EETL+ ++SML+ + + FT+ VLKAC++ ++ G +H+ ++K G
Sbjct: 450 VIAAHEQNGNEEETLNLFASMLRLRMEPDQFTYGSVLKACSSQQALNSGMEIHNRIIKSG 509
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
D+FV LIDMY KC ++K+ D + +++VSWN+II+ + +++A
Sbjct: 510 LGLDSFVGGALIDMYCKCGMIEEAKKIHDR--IEQQTMVSWNAIIAGFTLLKHSEDAHSF 567
Query: 121 LKEMWVLGLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
EM + ++ T+ V+ C S G +H + KL L++++ + ++++ MY+
Sbjct: 568 FYEMLKMSVKPDNFTYAIVLDACANLASVGLGKQIHGQIIKLE-LHSDVYITSTLVDMYS 626
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K G + ++ +F++ V+W +I GY G EA G +M+ +V P+ F++
Sbjct: 627 KCGNMQDSALVFEKAPNKDFVTWNAMICGYAQHGLGEEALGYFERMQLENVRPNHATFVS 686
Query: 237 LILGCAQVGNLFLALSMH---SLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAV- 292
++ CA +G F+ +H ++L + G + + ++ + + G + A ++ +
Sbjct: 687 ILRACAHMG--FIDKGLHYFNAMLTEYGLEPQIEHYSCMIDIIGRSGRISEALKLIQEMP 744
Query: 293 LEKSVFLWTSMI 304
E +W +++
Sbjct: 745 FEADAVIWRTLL 756
>gi|359484317|ref|XP_003633097.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Vitis vinifera]
Length = 1005
Score = 397 bits (1019), Expect = e-107, Method: Compositional matrix adjust.
Identities = 212/619 (34%), Positives = 342/619 (55%), Gaps = 12/619 (1%)
Query: 9 GSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQ 68
G E+ L+ + M + ++ + FT VLK CAN ++ G+ VHS +++G + D F+
Sbjct: 309 GDAEKVLNLFCRMTGSEINFSKFTLSTVLKGCANSGNLRAGQIVHSLAIRIGCELDEFIS 368
Query: 69 TGLIDMYSKCSDFVSSRKVLDEMPVRLRS--VVSWNSIISAHSRACLNDEAILVLKEMWV 126
L+DMYSKC + KV VR+ VVSW++II+ + + EA V K M
Sbjct: 369 CCLVDMYSKCGLAGDALKVF----VRIEDPDVVSWSAIITCLDQKGQSREAAEVFKRMRH 424
Query: 127 LGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVN 182
G+ + T S+VS + G S+H CV K G + + N++++MY K G V
Sbjct: 425 SGVIPNQFTLASLVSAATDLGDLYYGESIHACVCKYGFEYDNT-VCNALVTMYMKIGSVQ 483
Query: 183 EARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCA 242
+ +F+ ++SW ++ G+ + + + NQM P++ F++++ C+
Sbjct: 484 DGCRVFEATTNRDLISWNALLSGFHDNETCDTGLRIFNQMLAEGFNPNMYTFISILRSCS 543
Query: 243 QVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTS 302
+ ++ L +H+ ++K+ + D + LV MY K LE A +F+ ++++ +F WT
Sbjct: 544 SLSDVDLGKQVHAQIVKNSLDGNDFVGTALVDMYAKNRFLEDAETIFNRLIKRDLFAWTV 603
Query: 303 MIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNG 362
++ GYAQ G +AV F ++ + V+PNE TLA++LS C+ + +L G+++ + G
Sbjct: 604 IVAGYAQDGQGEKAVKCFIQMQREGVKPNEFTLASSLSGCSRIATLDSGRQLHSMAIKAG 663
Query: 363 LESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFY 422
+ V ++L+ M++KCG + A+ VF+ + +D W+ +I GY+ HG G +AL F
Sbjct: 664 QSGDMFVASALVDMYAKCGCVEDAEVVFDGLVSRDTVSWNTIICGYSQHGQGGKALKAFE 723
Query: 423 KMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGR 482
M EG PD V + +LSACSH G++++G F S+ +GI P+IEHY C+VD+LGR
Sbjct: 724 AMLD-EGTVPDEVTFIGVLSACSHMGLIEEGKKHFNSLSKIYGITPTIEHYACMVDILGR 782
Query: 483 AGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILM 542
AG+F I EM + +W +L AC H N+E GE AA L L P NYIL+
Sbjct: 783 AGKFHEVESFIEEMKLTSNVLIWETVLGACKMHGNIEFGERAAMKLFELEPEIDSNYILL 842
Query: 543 ANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTL 602
+N+F + GMW + R LM R + KEPG S VE++G V VF++ D SH +I L
Sbjct: 843 SNMFAAKGMWDDVTNVRALMSTRGVKKEPGCSWVEVNGQVHVFLSHDGSHPKIREIHLKL 902
Query: 603 KELHIKLLEAGYIAEADIV 621
++LH KL+ GY D V
Sbjct: 903 QDLHQKLMSVGYTPNTDHV 921
Score = 228 bits (582), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 136/471 (28%), Positives = 239/471 (50%), Gaps = 9/471 (1%)
Query: 18 YSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSK 77
+ M + GV N FT+ LKAC+ + GK+VH+ +KVG D FV + L+D+Y+K
Sbjct: 217 FCEMRREGVEANEFTYATALKACSMCLDLEFGKQVHAEAIKVGDFSDLFVGSALVDLYAK 276
Query: 78 CSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFV 137
C + V + +V MP ++ VSWN++++ ++ ++ + + M + S T
Sbjct: 277 CGEMVLAERVFLCMPK--QNAVSWNALLNGFAQMGDAEKVLNLFCRMTGSEINFSKFTLS 334
Query: 138 SVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGE 193
+V+ GC+ R G +H ++G +E ++ ++ MY+K G +A +F I +
Sbjct: 335 TVLKGCANSGNLRAGQIVHSLAIRIGCELDEF-ISCCLVDMYSKCGLAGDALKVFVRIED 393
Query: 194 TSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSM 253
+VSW+ II G EA + +MR V P+ +L+ +G+L+ S+
Sbjct: 394 PDVVSWSAIITCLDQKGQSREAAEVFKRMRHSGVIPNQFTLASLVSAATDLGDLYYGESI 453
Query: 254 HSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYP 313
H+ + K G+ ++ + N LV+MY K G ++ RVF+A + + W +++ G+
Sbjct: 454 HACVCKYGFEYDNTVCNALVTMYMKIGSVQDGCRVFEATTNRDLISWNALLSGFHDNETC 513
Query: 314 SEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSL 373
+ +F ++L PN T + L +C+ L + GK++ IV N L+ N V T+L
Sbjct: 514 DTGLRIFNQMLAEGFNPNMYTFISILRSCSSLSDVDLGKQVHAQIVKNSLDGNDFVGTAL 573
Query: 374 IHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPD 433
+ M++K + A+ +F R+ +DL W+ ++ GYA G G++A+ F +MQ EG+KP+
Sbjct: 574 VDMYAKNRFLEDAETIFNRLIKRDLFAWTVIVAGYAQDGQGEKAVKCFIQMQR-EGVKPN 632
Query: 434 AVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAG 484
S LS CS +D G SM G + LVD+ + G
Sbjct: 633 EFTLASSLSGCSRIATLDSGRQ-LHSMAIKAGQSGDMFVASALVDMYAKCG 682
Score = 196 bits (498), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 122/422 (28%), Positives = 214/422 (50%), Gaps = 8/422 (1%)
Query: 36 VLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRL 95
+L+ CA+ + +GK +H V+K G D+ + L+++Y+KC + KV E+P R
Sbjct: 134 MLRTCASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSANYACKVFGEIPER- 192
Query: 96 RSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCS----FRQGISM 151
VVSW ++I+ A+ + EM G+E + T+ + + CS G +
Sbjct: 193 -DVVSWTALITGFVAEGYGSGAVNLFCEMRREGVEANEFTYATALKACSMCLDLEFGKQV 251
Query: 152 HCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGN 211
H K+G + ++ + ++++ +YAK G++ A +F + + + VSW ++ G+ +G+
Sbjct: 252 HAEAIKVGDFS-DLFVGSALVDLYAKCGEMVLAERVFLCMPKQNAVSWNALLNGFAQMGD 310
Query: 212 VNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNL 271
+ L +M + ++ GCA GNL +HSL ++ G ++ +
Sbjct: 311 AEKVLNLFCRMTGSEINFSKFTLSTVLKGCANSGNLRAGQIVHSLAIRIGCELDEFISCC 370
Query: 272 LVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPN 331
LV MY+KCG A +VF + + V W+++I Q G EA +FKR+ + V PN
Sbjct: 371 LVDMYSKCGLAGDALKVFVRIEDPDVVSWSAIITCLDQKGQSREAAEVFKRMRHSGVIPN 430
Query: 332 EATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFE 391
+ TLA+ +SA +LG L G+ I + G E + V +L+ M+ K G + VFE
Sbjct: 431 QFTLASLVSAATDLGDLYYGESIHACVCKYGFEYDNTVCNALVTMYMKIGSVQDGCRVFE 490
Query: 392 RVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVD 451
++DL W+A+++G+ + D L +F +M EG P+ + SIL +CS VD
Sbjct: 491 ATTNRDLISWNALLSGFHDNETCDTGLRIFNQML-AEGFNPNMYTFISILRSCSSLSDVD 549
Query: 452 DG 453
G
Sbjct: 550 LG 551
Score = 139 bits (349), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 85/260 (32%), Positives = 137/260 (52%), Gaps = 2/260 (0%)
Query: 234 FLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVL 293
+ ++ CA G+L ++H ++KSG N + L N LV++Y KCG A +VF +
Sbjct: 131 YSGMLRTCASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSANYACKVFGEIP 190
Query: 294 EKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKE 353
E+ V WT++I G+ GY S AVNLF + + V NE T AT L AC+ L GK+
Sbjct: 191 ERDVVSWTALITGFVAEGYGSGAVNLFCEMRREGVEANEFTYATALKACSMCLDLEFGKQ 250
Query: 354 IEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGM 413
+ + G S+ V ++L+ +++KCG + A+ VF +P ++ W+A++NG+A G
Sbjct: 251 VHAEAIKVGDFSDLFVGSALVDLYAKCGEMVLAERVFLCMPKQNAVSWNALLNGFAQMGD 310
Query: 414 GDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHY 473
++ LNLF +M E + +++L C++SG + G S+ G E
Sbjct: 311 AEKVLNLFCRMTGSE-INFSKFTLSTVLKGCANSGNLRAG-QIVHSLAIRIGCELDEFIS 368
Query: 474 LCLVDLLGRAGRFDLALKTI 493
CLVD+ + G ALK
Sbjct: 369 CCLVDMYSKCGLAGDALKVF 388
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 105/444 (23%), Positives = 208/444 (46%), Gaps = 34/444 (7%)
Query: 7 NNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAF 66
+N + + L ++ ML G + N +TF +L++C++++ + GK+VH+ ++K + F
Sbjct: 509 DNETCDTGLRIFNQMLAEGFNPNMYTFISILRSCSSLSDVDLGKQVHAQIVKNSLDGNDF 568
Query: 67 VQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWV 126
V T L+DMY+K + F+ + + ++ R + +W I++ +++ ++A+ +M
Sbjct: 569 VGTALVDMYAK-NRFLEDAETIFNRLIK-RDLFAWTVIVAGYAQDGQGEKAVKCFIQMQR 626
Query: 127 LGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVN 182
G++ + T S +SGCS G +H K G + ++ +A++++ MYAK G V
Sbjct: 627 EGVKPNEFTLASSLSGCSRIATLDSGRQLHSMAIKAG-QSGDMFVASALVDMYAKCGCVE 685
Query: 183 EARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCA 242
+A +FD + VSW TII GY G +A M PD V F+ ++ C+
Sbjct: 686 DAEVVFDGLVSRDTVSWNTIICGYSQHGQGGKALKAFEAMLDEGTVPDEVTFIGVLSACS 745
Query: 243 QVGNLFLALSMHSLLLKSGYNNEDPLDN--LLVSMYTKCGDL-ELARRVFDAVLEKSVFL 299
+G L H L Y +++ +V + + G E+ + + L +V +
Sbjct: 746 HMG-LIEEGKKHFNSLSKIYGITPTIEHYACMVDILGRAGKFHEVESFIEEMKLTSNVLI 804
Query: 300 WTSMIG-----GYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSA------CAELGSL 348
W +++G G + G + A+ LF+ L+ + N L+ +A + +L
Sbjct: 805 WETVLGACKMHGNIEFGERA-AMKLFE--LEPEIDSNYILLSNMFAAKGMWDDVTNVRAL 861
Query: 349 SKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPD---KDLAVWSAMI 405
+ +++ + +E N QV L H G K +E+ ++ D K ++V
Sbjct: 862 MSTRGVKKEPGCSWVEVNGQVHVFLSHD----GSHPKIREIHLKLQDLHQKLMSVGYTPN 917
Query: 406 NGYAIHGMGDQALN--LFYKMQHV 427
+ +H + D+ LFY + +
Sbjct: 918 TDHVLHNVSDREKQELLFYHSERL 941
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/258 (27%), Positives = 119/258 (46%), Gaps = 15/258 (5%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
++ +G E+ + + M + GV N FT L C+ I ++ G+++HS +K G
Sbjct: 604 IVAGYAQDGQGEKAVKCFIQMQREGVKPNEFTLASSLSGCSRIATLDSGRQLHSMAIKAG 663
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
D FV + L+DMY+KC + V D + R VSWN+II +S+ +A+
Sbjct: 664 QSGDMFVASALVDMYAKCGCVEDAEVVFDGLVS--RDTVSWNTIICGYSQHGQGGKALKA 721
Query: 121 LKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
+ M G TF+ V+S CS +G + K+ + I ++ +
Sbjct: 722 FEAMLDEGTVPDEVTFIGVLSACSHMGLIEEGKKHFNSLSKIYGITPTIEHYACMVDILG 781
Query: 177 KFGKVNEARSIFDEIGETS-IVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFL 235
+ GK +E S +E+ TS ++ W T++G GN+ FG M+ + P++
Sbjct: 782 RAGKFHEVESFIEEMKLTSNVLIWETVLGACKMHGNIE--FGERAAMKLFELEPEIDS-- 837
Query: 236 NLILGCAQVGNLFLALSM 253
N IL + N+F A M
Sbjct: 838 NYIL----LSNMFAAKGM 851
>gi|168048332|ref|XP_001776621.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672066|gb|EDQ58609.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 703
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 210/616 (34%), Positives = 346/616 (56%), Gaps = 8/616 (1%)
Query: 10 SFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQT 69
+ E + + LQ G+ +SF + VLK C + K+VH ++K +Q+A V
Sbjct: 8 TLSEAIVVLMNRLQRGLITDSFMYVEVLKRCLKQKDLMAAKQVHDCIIKSRMEQNAHVMN 67
Query: 70 GLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGL 129
L+ +Y +C +R V D + + S SWN++I+ + ++A+ + +EM G+
Sbjct: 68 NLLHVYIECGRLQEARCVFDALVKK--SGASWNAMIAGYVEHKHAEDAMRLFREMCHEGV 125
Query: 130 ELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEAR 185
+ +A T++ ++ C+ + G +H C+ + G L +++ + +++ MY K G +NEAR
Sbjct: 126 QPNAGTYMIILKACASLSALKWGKEVHACI-RHGGLESDVRVGTALLRMYGKCGSINEAR 184
Query: 186 SIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVG 245
IFD + I+SWT +IG Y GN EA+ L QM + P+ + +++++ CA G
Sbjct: 185 RIFDNLMNHDIISWTVMIGAYAQSGNGKEAYRLMLQMEQEGFKPNAITYVSILNACASEG 244
Query: 246 NLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIG 305
L +H L +G + + LV MY K G ++ AR VFD + + V W MIG
Sbjct: 245 ALKWVKRVHRHALDAGLELDVRVGTALVQMYAKSGSIDDARVVFDRMKVRDVVSWNVMIG 304
Query: 306 GYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLES 365
+A+ G EA +LF ++ +P+ + L+ACA G+L K+I + + +GLE
Sbjct: 305 AFAEHGRGHEAYDLFLQMQTEGCKPDAIMFLSILNACASAGALEWVKKIHRHALDSGLEV 364
Query: 366 NRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQ 425
+ +V T+L+HM+SK G I+ A+ VF+R+ +++ W+AMI+G A HG+G AL +F +M
Sbjct: 365 DVRVGTALVHMYSKSGSIDDARVVFDRMKVRNVVSWNAMISGLAQHGLGQDALEVFRRMT 424
Query: 426 HVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGR 485
G+KPD V + ++LSACSH+G+VD+G S + +M +GIEP + H C+VDLLGRAGR
Sbjct: 425 -AHGVKPDRVTFVAVLSACSHAGLVDEGRSQYLAMTQVYGIEPDVSHCNCMVDLLGRAGR 483
Query: 486 FDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANL 545
A I M V+ W LL +C + NVELGE AK L L+P + Y+L++N+
Sbjct: 484 LMEAKLFIDNMAVDPDEATWGALLGSCRTYGNVELGELVAKERLKLDPKNAATYVLLSNI 543
Query: 546 FTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKEL 605
+ AG W + R +M +R + KEPG S +E+D + F+ D SH +I ++ ++
Sbjct: 544 YAEAGKWDMVSWVRTMMRERGIRKEPGRSWIEVDNKIHDFLVADSSHPECKEINESKDKV 603
Query: 606 HIKLLEAGYIAEADIV 621
K+ GYI + +V
Sbjct: 604 IEKIKAEGYIPDTRLV 619
Score = 211 bits (538), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 120/419 (28%), Positives = 220/419 (52%), Gaps = 11/419 (2%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI + E+ + + M GV N+ T+ ++LKACA+++++ GK VH+ + G
Sbjct: 100 MIAGYVEHKHAEDAMRLFREMCHEGVQPNAGTYMIILKACASLSALKWGKEVHACIRHGG 159
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+ D V T L+ MY KC +R++ D + ++SW +I A++++ EA +
Sbjct: 160 LESDVRVGTALLRMYGKCGSINEARRIFDNLMN--HDIISWTVMIGAYAQSGNGKEAYRL 217
Query: 121 LKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGL---LNNEIPLANSVMSMYAK 177
+ +M G + +A T+VS+++ C+ + V++ L L ++ + +++ MYAK
Sbjct: 218 MLQMEQEGFKPNAITYVSILNACASEGALKWVKRVHRHALDAGLELDVRVGTALVQMYAK 277
Query: 178 FGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNL 237
G +++AR +FD + +VSW +IG + G +EA+ L QM+ PD ++FL++
Sbjct: 278 SGSIDDARVVFDRMKVRDVVSWNVMIGAFAEHGRGHEAYDLFLQMQTEGCKPDAIMFLSI 337
Query: 238 ILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSV 297
+ CA G L +H L SG + + LV MY+K G ++ AR VFD + ++V
Sbjct: 338 LNACASAGALEWVKKIHRHALDSGLEVDVRVGTALVHMYSKSGSIDDARVVFDRMKVRNV 397
Query: 298 FLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEY 357
W +MI G AQ G +A+ +F+R+ V+P+ T LSAC+ G + +G+ +Y
Sbjct: 398 VSWNAMISGLAQHGLGQDALEVFRRMTAHGVKPDRVTFVAVLSACSHAGLVDEGR--SQY 455
Query: 358 IVLN---GLESNRQVQTSLIHMFSKCGRINKAKEVFERVP-DKDLAVWSAMINGYAIHG 412
+ + G+E + ++ + + GR+ +AK + + D D A W A++ +G
Sbjct: 456 LAMTQVYGIEPDVSHCNCMVDLLGRAGRLMEAKLFIDNMAVDPDEATWGALLGSCRTYG 514
>gi|359482115|ref|XP_003632713.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Vitis vinifera]
Length = 989
Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust.
Identities = 208/621 (33%), Positives = 344/621 (55%), Gaps = 8/621 (1%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+I G + L + M + + T +L ACA++ + + GK++HS+V+K+G
Sbjct: 285 LISGLAQRGFSDRALQLFEKMQLDCMKPDCVTVASLLSACASVGAGYKGKQLHSYVIKMG 344
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
D ++ L+D+Y KC D ++ + + +VV WN ++ A+ + E+ +
Sbjct: 345 MSSDLIIEGSLLDLYVKCFDIETAHEYF--LTTETENVVLWNVMLVAYGQLGNLSESYWI 402
Query: 121 LKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
+M + GL + T+ S++ C+ G +H V K G N + + + ++ MYA
Sbjct: 403 FLQMQIEGLMPNQYTYPSILRTCTSLGALDLGEQIHTQVIKSGFQFN-VYVCSVLIDMYA 461
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K G+++ AR I + E +VSWT +I GY EA L +M + D + F +
Sbjct: 462 KHGELDTARGILQRLREEDVVSWTAMIAGYTQHDLFAEALKLFQEMENQGIRSDNIGFSS 521
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
I CA + L +H+ SGY+ + + N LVS+Y +CG + A F+ + K
Sbjct: 522 AISACAGIQALNQGQQIHAQSYISGYSEDLSIGNALVSLYARCGRAQDAYLAFEKIDAKD 581
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEE 356
W ++I G+AQ G+ EA+ +F ++ + V N T + +SA A ++ +GK+I
Sbjct: 582 NISWNALISGFAQSGHCEEALQVFSQMNQAGVEANLFTFGSAVSATANTANIKQGKQIHA 641
Query: 357 YIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQ 416
++ G +S + LI ++SKCG I AK F +P+K++ W+AMI GY+ HG G +
Sbjct: 642 MMIKTGYDSETEASNVLITLYSKCGSIEDAKREFFEMPEKNVVSWNAMITGYSQHGYGSE 701
Query: 417 ALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCL 476
A++LF +M+ + GL P+ V + +LSACSH G+V++GLS+F+SM G+ P EHY+C+
Sbjct: 702 AVSLFEEMKQL-GLMPNHVTFVGVLSACSHVGLVNEGLSYFRSMSKEHGLVPKPEHYVCV 760
Query: 477 VDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGST 536
VDLLGRA A + I EMP+E A +W LLSAC H N+E+GE+AA++LL L P +
Sbjct: 761 VDLLGRAALLCCAREFIEEMPIEPDAMIWRTLLSACTVHKNIEIGEFAARHLLELEPEDS 820
Query: 537 GNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSV 596
Y+L++N++ +G W R +M DR + KEPG S +E+ S+ F GDR H L+
Sbjct: 821 ATYVLLSNMYAVSGKWDYRDRTRQMMKDRGVKKEPGRSWIEVKNSIHAFFVGDRLHPLAE 880
Query: 597 DIRKTLKELHIKLLEAGYIAE 617
I + + +L+ + E GY+ +
Sbjct: 881 QIYEYIDDLNERAGEIGYVQD 901
Score = 223 bits (569), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 131/519 (25%), Positives = 270/519 (52%), Gaps = 10/519 (1%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI + NG +E + + M ++ V + F VL AC I G+++H ++K G
Sbjct: 184 MISGLSQNGREDEAILLFCQMHKSAVIPTPYVFSSVLSACTKIELFKLGEQLHGFIVKWG 243
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+ FV L+ +YS+ + +++ ++ +M R R +S+NS+IS ++ +D A+ +
Sbjct: 244 LSSETFVCNALVTLYSRWGNLIAAEQIFSKMHRRDR--ISYNSLISGLAQRGFSDRALQL 301
Query: 121 LKEMWVLGLELSASTFVSVVSGCSF----RQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
++M + ++ T S++S C+ +G +H V K+G +++++ + S++ +Y
Sbjct: 302 FEKMQLDCMKPDCVTVASLLSACASVGAGYKGKQLHSYVIKMG-MSSDLIIEGSLLDLYV 360
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K + A F ++V W ++ Y +GN++E++ + QM+ + P+ + +
Sbjct: 361 KCFDIETAHEYFLTTETENVVLWNVMLVAYGQLGNLSESYWIFLQMQIEGLMPNQYTYPS 420
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
++ C +G L L +H+ ++KSG+ + ++L+ MY K G+L+ AR + + E+
Sbjct: 421 ILRTCTSLGALDLGEQIHTQVIKSGFQFNVYVCSVLIDMYAKHGELDTARGILQRLREED 480
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEE 356
V WT+MI GY Q +EA+ LF+ + +R + ++ +SACA + +L++G++I
Sbjct: 481 VVSWTAMIAGYTQHDLFAEALKLFQEMENQGIRSDNIGFSSAISACAGIQALNQGQQIHA 540
Query: 357 YIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQ 416
++G + + +L+ ++++CGR A FE++ KD W+A+I+G+A G ++
Sbjct: 541 QSYISGYSEDLSIGNALVSLYARCGRAQDAYLAFEKIDAKDNISWNALISGFAQSGHCEE 600
Query: 417 ALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCL 476
AL +F +M G++ + + S +SA +++ + G +M G + E L
Sbjct: 601 ALQVFSQMNQA-GVEANLFTFGSAVSATANTANIKQGKQ-IHAMMIKTGYDSETEASNVL 658
Query: 477 VDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKH 515
+ L + G + A + EMP E W +++ +H
Sbjct: 659 ITLYSKCGSIEDAKREFFEMP-EKNVVSWNAMITGYSQH 696
Score = 219 bits (557), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 140/479 (29%), Positives = 257/479 (53%), Gaps = 12/479 (2%)
Query: 13 ETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWD-GKRVHSHVLKVGFQQDAFVQTGL 71
+ L +S M+ V + TF VL+AC+ + + +++H+ ++ GF V L
Sbjct: 94 QVLGLFSLMITENVTPDESTFASVLRACSGGKAPFQVTEQIHAKIIHHGFGSSPLVCNPL 153
Query: 72 IDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLEL 131
ID+YSK ++ V + + L+ VSW ++IS S+ DEAIL+ +M +
Sbjct: 154 IDLYSKNGHVDLAKLVFERL--FLKDSVSWVAMISGLSQNGREDEAILLFCQMHKSAVIP 211
Query: 132 SASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSI 187
+ F SV+S C+ F+ G +H + K GL ++E + N+++++Y+++G + A I
Sbjct: 212 TPYVFSSVLSACTKIELFKLGEQLHGFIVKWGL-SSETFVCNALVTLYSRWGNLIAAEQI 270
Query: 188 FDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNL 247
F ++ +S+ ++I G G + A L +M+ + PD V +L+ CA VG
Sbjct: 271 FSKMHRRDRISYNSLISGLAQRGFSDRALQLFEKMQLDCMKPDCVTVASLLSACASVGAG 330
Query: 248 FLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGY 307
+ +HS ++K G +++ ++ L+ +Y KC D+E A F ++V LW M+ Y
Sbjct: 331 YKGKQLHSYVIKMGMSSDLIIEGSLLDLYVKCFDIETAHEYFLTTETENVVLWNVMLVAY 390
Query: 308 AQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNR 367
QLG SE+ +F ++ + PN+ T + L C LG+L G++I ++ +G + N
Sbjct: 391 GQLGNLSESYWIFLQMQIEGLMPNQYTYPSILRTCTSLGALDLGEQIHTQVIKSGFQFNV 450
Query: 368 QVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHV 427
V + LI M++K G ++ A+ + +R+ ++D+ W+AMI GY H + +AL LF +M++
Sbjct: 451 YVCSVLIDMYAKHGELDTARGILQRLREEDVVSWTAMIAGYTQHDLFAEALKLFQEMEN- 509
Query: 428 EGLKPDAVVYTSILSACSHSGMVDDGLSFF-KSMQSNFGIEPSIEHYLCLVDLLGRAGR 485
+G++ D + ++S +SAC+ ++ G +S S + + SI + LV L R GR
Sbjct: 510 QGIRSDNIGFSSAISACAGIQALNQGQQIHAQSYISGYSEDLSIGN--ALVSLYARCGR 566
Score = 212 bits (539), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 136/503 (27%), Positives = 255/503 (50%), Gaps = 17/503 (3%)
Query: 21 MLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSD 80
M + G+ N T+ + + C N S+ D K++H+ + K GF + + + LID+Y +
Sbjct: 1 MEERGIRANVQTYLWLFEGCFNSGSLLDAKKLHARIFKSGFDGEDVLGSRLIDIYLAHGE 60
Query: 81 FVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVV 140
++ K+ D++P +V WN +IS L + + + M + STF SV+
Sbjct: 61 VDNAIKLFDDIPS--SNVSFWNKVISGLLAKKLASQVLGLFSLMITENVTPDESTFASVL 118
Query: 141 SGCS-----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETS 195
CS F+ +H + G ++ + + N ++ +Y+K G V+ A+ +F+ +
Sbjct: 119 RACSGGKAPFQVTEQIHAKIIHHGFGSSPL-VCNPLIDLYSKNGHVDLAKLVFERLFLKD 177
Query: 196 IVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHS 255
VSW +I G G +EA L QM + +V P VF +++ C ++ L +H
Sbjct: 178 SVSWVAMISGLSQNGREDEAILLFCQMHKSAVIPTPYVFSSVLSACTKIELFKLGEQLHG 237
Query: 256 LLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSE 315
++K G ++E + N LV++Y++ G+L A ++F + + + S+I G AQ G+
Sbjct: 238 FIVKWGLSSETFVCNALVTLYSRWGNLIAAEQIFSKMHRRDRISYNSLISGLAQRGFSDR 297
Query: 316 AVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIH 375
A+ LF+++ ++P+ T+A+ LSACA +G+ KGK++ Y++ G+ S+ ++ SL+
Sbjct: 298 ALQLFEKMQLDCMKPDCVTVASLLSACASVGAGYKGKQLHSYVIKMGMSSDLIIEGSLLD 357
Query: 376 MFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAV 435
++ KC I A E F +++ +W+ M+ Y G ++ +F +MQ +EGL P+
Sbjct: 358 LYVKCFDIETAHEYFLTTETENVVLWNVMLVAYGQLGNLSESYWIFLQMQ-IEGLMPNQY 416
Query: 436 VYTSILSACSHSGMVDDGLSFF-KSMQSNFGIEPSIEHYLC--LVDLLGRAGRFDLALKT 492
Y SIL C+ G +D G + ++S F Y+C L+D+ + G D A
Sbjct: 417 TYPSILRTCTSLGALDLGEQIHTQVIKSGFQFNV----YVCSVLIDMYAKHGELDTARGI 472
Query: 493 IHEMPVEVQAQVWAPLLSACMKH 515
+ + E W +++ +H
Sbjct: 473 LQRLR-EEDVVSWTAMIAGYTQH 494
>gi|356552027|ref|XP_003544373.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g16860-like [Glycine max]
Length = 986
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 234/672 (34%), Positives = 359/672 (53%), Gaps = 58/672 (8%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+IR + + GS + + Y M G + +TFP V KACAN++S+ G +H+ V + G
Sbjct: 230 LIRRALHLGSPRDVFTLYRQMKSLGWTPDHYTFPFVFKACANLSSLSLGASLHATVSRSG 289
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVR-LRSVVSWNSIISAHSRACLNDEAIL 119
F + FV ++ MY KC + + D++ R ++ +VSWNS++SA+ A + A+
Sbjct: 290 FASNVFVCNAVVSMYGKCGALRHAHNMFDDLCHRGIQDLVSWNSVVSAYMWASDANTALA 349
Query: 120 VLKEMWVLGL-ELSASTFVSVVSGC-----SFRQGISMHCCVYKLGLLNNEIPLANSVMS 173
+ +M L + V+++ C S R G +H + GL++ ++ + N+V+
Sbjct: 350 LFHKMTTRHLMSPDVISLVNILPACASLAASLR-GRQVHGFSIRSGLVD-DVFVGNAVVD 407
Query: 174 MYAKFGKVNEARSIFDEIG-----------------------------------ETSIVS 198
MYAK GK+ EA +F + E +V+
Sbjct: 408 MYAKCGKMEEANKVFQRMKFKDVVSWNAMVTGYSQAGRLEHALSLFERMTEENIELDVVT 467
Query: 199 WTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLL 258
WT +I GY G EA + QM P++V ++L+ C VG L H +
Sbjct: 468 WTAVITGYAQRGQGCEALDVFRQMCDCGSRPNVVTLVSLLSACVSVGALLHGKETHCYAI 527
Query: 259 KSGYNNEDP--------LDNLLVSMYTKCGDLELARRVFDAV--LEKSVFLWTSMIGGYA 308
K N + P + N L+ MY KC E+AR++FD+V ++ V WT MIGGYA
Sbjct: 528 KFILNLDGPDPGADDLKVINGLIDMYAKCQSTEVARKMFDSVSPKDRDVVTWTVMIGGYA 587
Query: 309 QLGYPSEAVNLFKRLLK--TSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESN 366
Q G + A+ LF + K S++PN+ TL+ L ACA L +L G+++ Y++ N S
Sbjct: 588 QHGDANNALQLFSGMFKMDKSIKPNDFTLSCALVACARLAALRFGRQVHAYVLRNFYGSV 647
Query: 367 RQ-VQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQ 425
V LI M+SK G ++ A+ VF+ +P ++ W++++ GY +HG G+ AL +F +M+
Sbjct: 648 MLFVANCLIDMYSKSGDVDTAQIVFDNMPQRNAVSWTSLMTGYGMHGRGEDALRVFDEMR 707
Query: 426 HVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGR 485
V L PD + + +L ACSHSGMVD G++FF M +FG++P EHY C+VDL GRAGR
Sbjct: 708 KVP-LVPDGITFLVVLYACSHSGMVDHGINFFNRMSKDFGVDPGPEHYACMVDLWGRAGR 766
Query: 486 FDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANL 545
A+K I+EMP+E VW LLSAC H NVELGE+AA LL L G+ G+Y L++N+
Sbjct: 767 LGEAMKLINEMPMEPTPVVWVALLSACRLHSNVELGEFAANRLLELESGNDGSYTLLSNI 826
Query: 546 FTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKEL 605
+ +A WK+ A R M + K PG S ++ V F GDRSH S I +TL +L
Sbjct: 827 YANARRWKDVARIRYTMKRTGIKKRPGCSWIQGRKGVATFYVGDRSHPQSQQIYETLADL 886
Query: 606 HIKLLEAGYIAE 617
++ GY+ +
Sbjct: 887 IQRIKAIGYVPQ 898
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 84/291 (28%), Positives = 160/291 (54%), Gaps = 9/291 (3%)
Query: 194 TSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSM 253
+S+ W +I +++G+ + F L QM+ + TPD F + CA + +L L S+
Sbjct: 222 SSVFWWNQLIRRALHLGSPRDVFTLYRQMKSLGWTPDHYTFPFVFKACANLSSLSLGASL 281
Query: 254 HSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSV---FLWTSMIGGYAQL 310
H+ + +SG+ + + N +VSMY KCG L A +FD + + + W S++ Y
Sbjct: 282 HATVSRSGFASNVFVCNAVVSMYGKCGALRHAHNMFDDLCHRGIQDLVSWNSVVSAYMWA 341
Query: 311 GYPSEAVNLFKRL-LKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQV 369
+ A+ LF ++ + + P+ +L L ACA L + +G+++ + + +GL + V
Sbjct: 342 SDANTALALFHKMTTRHLMSPDVISLVNILPACASLAASLRGRQVHGFSIRSGLVDDVFV 401
Query: 370 QTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEG 429
+++ M++KCG++ +A +VF+R+ KD+ W+AM+ GY+ G + AL+LF +M E
Sbjct: 402 GNAVVDMYAKCGKMEEANKVFQRMKFKDVVSWNAMVTGYSQAGRLEHALSLFERMTE-EN 460
Query: 430 LKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLL 480
++ D V +T++++ + G + L F+ M + G P++ + LV LL
Sbjct: 461 IELDVVTWTAVITGYAQRGQGCEALDVFRQM-CDCGSRPNV---VTLVSLL 507
>gi|449449950|ref|XP_004142727.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g47840-like [Cucumis sativus]
Length = 712
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 224/630 (35%), Positives = 343/630 (54%), Gaps = 17/630 (2%)
Query: 1 MIRNSTNNGSFEETLSTYSSM-LQTGVHGNSFTFPLVLKACA-NINSIWDGKRVHSHVLK 58
+I N+ E L +S M LQ+ + + F L LK C +N ++ G +H +K
Sbjct: 86 IISGYVNSSDSSEALRLFSKMRLQSELRIDPFLLSLGLKTCGLGLNYLY-GTNLHGFSVK 144
Query: 59 VGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAI 118
G FV + L+DMY K + S KV DEMP R + V+W ++I+ RA ++ +
Sbjct: 145 TGLVNSVFVGSALLDMYMKIGEIGRSCKVFDEMPTR--NAVTWTAVITGLVRAGYSEAGL 202
Query: 119 LVLKEMWVLGLELSASTFV-----SVVSGCSFRQGISMHCCVYKLGLLNNEIPLANSVMS 173
M +E + + S SG + G S+H K G N +ANS+ +
Sbjct: 203 AYFSGMGRSKVEYDSYAYAIALKASADSG-ALNHGRSIHTQTLKKGFDENSF-VANSLTT 260
Query: 174 MYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVV 233
MY K GK++ F ++ +VSWTTI+ Y+ +G + +MR +V P+
Sbjct: 261 MYNKCGKLDYGLHTFRKMRTLDVVSWTTIVTAYIQMGKEDCGLQAFKRMRASNVIPNEYT 320
Query: 234 FLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVL 293
F +I CA L +H+ +L G+ N + N ++++Y+KCG+L +VF ++
Sbjct: 321 FSAVISCCANFARLKWGEQLHAHVLCVGFVNALSVANSIMTLYSKCGELASVSKVFCSMK 380
Query: 294 EKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKE 353
+ + W+++I Y+Q+GY EA R+ +PNE LA+ LS C + L +GK+
Sbjct: 381 FRDIITWSTIIAAYSQVGYGEEAFEYLSRMRSEGPKPNEFALASVLSVCGSMAILEQGKQ 440
Query: 354 IEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGM 413
+ +++ GLE V ++LI M++KCG I +A ++F D+ W+AMI+GYA HG
Sbjct: 441 LHAHVLSVGLEQTSMVCSALIIMYAKCGSIAEASKIFMDSWKDDIISWTAMISGYAEHGH 500
Query: 414 GDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHY 473
+A+ LF +Q V GL+PD+V + +L+ACSH+GMVD G +F SM ++ I PS EHY
Sbjct: 501 SQEAIELFENIQKV-GLRPDSVTFIGVLTACSHAGMVDLGFYYFNSMSKDYHITPSKEHY 559
Query: 474 LCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNP 533
C++DLL RAGR A I MP++ VW+ LL AC H +V+ G+ AA +L L+P
Sbjct: 560 GCMIDLLCRAGRLHDAETLIRSMPIQWDDVVWSTLLRACRIHGDVDCGQRAAAEVLKLDP 619
Query: 534 GSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHH 593
G +I +AN+F + G WKEAA R LM + + KEPGWS V++ SV FV+GDRSH
Sbjct: 620 NCAGTHITLANIFAAKGKWKEAANIRMLMKSKGVVKEPGWSSVKVKDSVFAFVSGDRSHP 679
Query: 594 LSVDIRKTLKEL----HIKLLEAGYIAEAD 619
DI L+EL I +LE ++ D
Sbjct: 680 QGEDIYNILEELASGMEIYILELNHLVTDD 709
Score = 175 bits (444), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 106/383 (27%), Positives = 188/383 (49%), Gaps = 11/383 (2%)
Query: 77 KCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTF 136
K + +R + D++P R VSW +IIS + + + EA+ + +M L EL F
Sbjct: 61 KTNHLKDARDLFDQLP--QRDEVSWTNIISGYVNSSDSSEALRLFSKM-RLQSELRIDPF 117
Query: 137 VSVVS------GCSFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDE 190
+ + G ++ G ++H K GL+N+ + + ++++ MY K G++ + +FDE
Sbjct: 118 LLSLGLKTCGLGLNYLYGTNLHGFSVKTGLVNS-VFVGSALLDMYMKIGEIGRSCKVFDE 176
Query: 191 IGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLA 250
+ + V+WT +I G V G + M R V D + + A G L
Sbjct: 177 MPTRNAVTWTAVITGLVRAGYSEAGLAYFSGMGRSKVEYDSYAYAIALKASADSGALNHG 236
Query: 251 LSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQL 310
S+H+ LK G++ + N L +MY KCG L+ F + V WT+++ Y Q+
Sbjct: 237 RSIHTQTLKKGFDENSFVANSLTTMYNKCGKLDYGLHTFRKMRTLDVVSWTTIVTAYIQM 296
Query: 311 GYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQ 370
G + FKR+ ++V PNE T + +S CA L G+++ +++ G + V
Sbjct: 297 GKEDCGLQAFKRMRASNVIPNEYTFSAVISCCANFARLKWGEQLHAHVLCVGFVNALSVA 356
Query: 371 TSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGL 430
S++ ++SKCG + +VF + +D+ WS +I Y+ G G++A +M+ EG
Sbjct: 357 NSIMTLYSKCGELASVSKVFCSMKFRDIITWSTIIAAYSQVGYGEEAFEYLSRMRS-EGP 415
Query: 431 KPDAVVYTSILSACSHSGMVDDG 453
KP+ S+LS C +++ G
Sbjct: 416 KPNEFALASVLSVCGSMAILEQG 438
Score = 135 bits (339), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 79/289 (27%), Positives = 147/289 (50%), Gaps = 4/289 (1%)
Query: 161 LNNEIPLA--NSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGL 218
+N++ LA N+ + + K + +AR +FD++ + VSWT II GYVN + +EA L
Sbjct: 43 FSNKVDLAEANNQLKILVKTNHLKDARDLFDQLPQRDEVSWTNIISGYVNSSDSSEALRL 102
Query: 219 CNQMRRMSVTPDLVVFLNLILGCAQVG-NLFLALSMHSLLLKSGYNNEDPLDNLLVSMYT 277
++MR S L+L L +G N ++H +K+G N + + L+ MY
Sbjct: 103 FSKMRLQSELRIDPFLLSLGLKTCGLGLNYLYGTNLHGFSVKTGLVNSVFVGSALLDMYM 162
Query: 278 KCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLAT 337
K G++ + +VFD + ++ WT++I G + GY + F + ++ V + A
Sbjct: 163 KIGEIGRSCKVFDEMPTRNAVTWTAVITGLVRAGYSEAGLAYFSGMGRSKVEYDSYAYAI 222
Query: 338 TLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKD 397
L A A+ G+L+ G+ I + G + N V SL M++KCG+++ F ++ D
Sbjct: 223 ALKASADSGALNHGRSIHTQTLKKGFDENSFVANSLTTMYNKCGKLDYGLHTFRKMRTLD 282
Query: 398 LAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSH 446
+ W+ ++ Y G D L F +M+ + P+ +++++S C++
Sbjct: 283 VVSWTTIVTAYIQMGKEDCGLQAFKRMR-ASNVIPNEYTFSAVISCCAN 330
>gi|449502685|ref|XP_004161713.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g47840-like [Cucumis
sativus]
Length = 712
Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust.
Identities = 224/630 (35%), Positives = 343/630 (54%), Gaps = 17/630 (2%)
Query: 1 MIRNSTNNGSFEETLSTYSSM-LQTGVHGNSFTFPLVLKACA-NINSIWDGKRVHSHVLK 58
+I N+ E L +S M LQ+ + + F L LK C +N ++ G +H +K
Sbjct: 86 IISGYVNSSDSSEALRLFSKMRLQSELRIDPFLLSLGLKTCGLGLNYLY-GTNLHGFSVK 144
Query: 59 VGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAI 118
G FV + L+DMY K + S KV DEMP R + V+W ++I+ RA ++ +
Sbjct: 145 XGLVNSVFVGSALLDMYMKIGEIGRSCKVFDEMPTR--NAVTWTAVITGLVRAGYSEAGL 202
Query: 119 LVLKEMWVLGLELSASTFV-----SVVSGCSFRQGISMHCCVYKLGLLNNEIPLANSVMS 173
M +E + + S SG + G S+H K G N +ANS+ +
Sbjct: 203 AYFSGMGRSKVEYDSYAYAIALKASADSG-ALNHGRSIHTQTLKKGFDENSF-VANSLTT 260
Query: 174 MYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVV 233
MY K GK++ F ++ +VSWTTI+ Y+ +G + +MR +V P+
Sbjct: 261 MYNKCGKLDYGLHTFRKMRTLDVVSWTTIVTAYIQMGKEDCGLQAFKRMRASNVIPNEYT 320
Query: 234 FLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVL 293
F +I CA L +H+ +L G+ N + N ++++Y+KCG+L +VF ++
Sbjct: 321 FSAVISCCANFARLKWGEQLHAHVLCVGFVNALSVANSIMTLYSKCGELASVSKVFCSMK 380
Query: 294 EKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKE 353
+ + W+++I Y+Q+GY EA R+ +PNE LA+ LS C + L +GK+
Sbjct: 381 FRDIITWSTIIAAYSQVGYGEEAFEYLSRMRSEGPKPNEFALASVLSVCGSMAILEQGKQ 440
Query: 354 IEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGM 413
+ +++ GLE V ++LI M++KCG I +A ++F D+ W+AMI+GYA HG
Sbjct: 441 LHAHVLSVGLEQTSMVCSALIIMYAKCGSIAEASKIFMDSWKDDIISWTAMISGYAEHGH 500
Query: 414 GDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHY 473
+A+ LF +Q V GL+PD+V + +L+ACSH+GMVD G +F SM ++ I PS EHY
Sbjct: 501 SQEAIELFENIQKV-GLRPDSVTFIGVLTACSHAGMVDLGFYYFNSMSKDYHITPSKEHY 559
Query: 474 LCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNP 533
C++DLL RAGR A I MP++ VW+ LL AC H +V+ G+ AA +L L+P
Sbjct: 560 GCMIDLLCRAGRLHDAETLIRSMPIQWDDVVWSTLLRACRIHGDVDCGQRAAAEVLKLDP 619
Query: 534 GSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHH 593
G +I +AN+F + G WKEAA R LM + + KEPGWS V++ SV FV+GDRSH
Sbjct: 620 NCAGTHITLANIFAAKGKWKEAANIRMLMKSKGVVKEPGWSSVKVKDSVFAFVSGDRSHP 679
Query: 594 LSVDIRKTLKEL----HIKLLEAGYIAEAD 619
DI L+EL I +LE ++ D
Sbjct: 680 QGEDIYNILEELASGMEIYILELNHLVTDD 709
Score = 175 bits (444), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 106/383 (27%), Positives = 188/383 (49%), Gaps = 11/383 (2%)
Query: 77 KCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTF 136
K + +R + D++P R VSW +IIS + + + EA+ + +M L EL F
Sbjct: 61 KTNHLKDARDLFDQLP--QRDEVSWTNIISGYVNSSDSSEALRLFSKM-RLQSELRIDPF 117
Query: 137 VSVVS------GCSFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDE 190
+ + G ++ G ++H K GL+N+ + + ++++ MY K G++ + +FDE
Sbjct: 118 LLSLGLKTCGLGLNYLYGTNLHGFSVKXGLVNS-VFVGSALLDMYMKIGEIGRSCKVFDE 176
Query: 191 IGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLA 250
+ + V+WT +I G V G + M R V D + + A G L
Sbjct: 177 MPTRNAVTWTAVITGLVRAGYSEAGLAYFSGMGRSKVEYDSYAYAIALKASADSGALNHG 236
Query: 251 LSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQL 310
S+H+ LK G++ + N L +MY KCG L+ F + V WT+++ Y Q+
Sbjct: 237 RSIHTQTLKKGFDENSFVANSLTTMYNKCGKLDYGLHTFRKMRTLDVVSWTTIVTAYIQM 296
Query: 311 GYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQ 370
G + FKR+ ++V PNE T + +S CA L G+++ +++ G + V
Sbjct: 297 GKEDCGLQAFKRMRASNVIPNEYTFSAVISCCANFARLKWGEQLHAHVLCVGFVNALSVA 356
Query: 371 TSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGL 430
S++ ++SKCG + +VF + +D+ WS +I Y+ G G++A +M+ EG
Sbjct: 357 NSIMTLYSKCGELASVSKVFCSMKFRDIITWSTIIAAYSQVGYGEEAFEYLSRMRS-EGP 415
Query: 431 KPDAVVYTSILSACSHSGMVDDG 453
KP+ S+LS C +++ G
Sbjct: 416 KPNEFALASVLSVCGSMAILEQG 438
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 79/289 (27%), Positives = 146/289 (50%), Gaps = 4/289 (1%)
Query: 161 LNNEIPLA--NSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGL 218
+N++ LA N+ + + K + +AR +FD++ + VSWT II GYVN + +EA L
Sbjct: 43 FSNKVDLAEANNQLKILVKTNHLKDARDLFDQLPQRDEVSWTNIISGYVNSSDSSEALRL 102
Query: 219 CNQMRRMSVTPDLVVFLNLILGCAQVG-NLFLALSMHSLLLKSGYNNEDPLDNLLVSMYT 277
++MR S L+L L +G N ++H +K G N + + L+ MY
Sbjct: 103 FSKMRLQSELRIDPFLLSLGLKTCGLGLNYLYGTNLHGFSVKXGLVNSVFVGSALLDMYM 162
Query: 278 KCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLAT 337
K G++ + +VFD + ++ WT++I G + GY + F + ++ V + A
Sbjct: 163 KIGEIGRSCKVFDEMPTRNAVTWTAVITGLVRAGYSEAGLAYFSGMGRSKVEYDSYAYAI 222
Query: 338 TLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKD 397
L A A+ G+L+ G+ I + G + N V SL M++KCG+++ F ++ D
Sbjct: 223 ALKASADSGALNHGRSIHTQTLKKGFDENSFVANSLTTMYNKCGKLDYGLHTFRKMRTLD 282
Query: 398 LAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSH 446
+ W+ ++ Y G D L F +M+ + P+ +++++S C++
Sbjct: 283 VVSWTTIVTAYIQMGKEDCGLQAFKRMR-ASNVIPNEYTFSAVISCCAN 330
>gi|296084942|emb|CBI28351.3| unnamed protein product [Vitis vinifera]
Length = 770
Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust.
Identities = 215/623 (34%), Positives = 368/623 (59%), Gaps = 11/623 (1%)
Query: 6 TNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDA 65
+ N +E L+ + + ++G + + VLK C + GK+VH +K GF +D
Sbjct: 68 SRNDQNKEALNLFLGLRRSGSPTDGSSLSCVLKVCGCLFDRIVGKQVHCQCIKCGFVEDV 127
Query: 66 FVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMW 125
V T L+DMY K +V DEM R+++VVSW S+++ + + LN++A+ + +M
Sbjct: 128 SVGTSLVDMYMKTESVEDGERVFDEM--RVKNVVSWTSLLAGYRQNGLNEQALKLFSQMQ 185
Query: 126 VLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKV 181
+ G++ + TF +V+ G + +G+ +H V K GL ++ I + NS+++MY+K V
Sbjct: 186 LEGIKPNPFTFAAVLGGLAADGAVEKGVQVHTMVIKSGL-DSTIFVGNSMVNMYSKSLMV 244
Query: 182 NEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGC 241
++A+++FD + + VSW ++I G+V G EAF L +MR V +F +I C
Sbjct: 245 SDAKAVFDSMENRNAVSWNSMIAGFVTNGLDLEAFELFYRMRLEGVKLTQTIFATVIKLC 304
Query: 242 AQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLE-KSVFLW 300
A + + A +H ++K+G + + + L+ Y+KC +++ A ++F + ++V W
Sbjct: 305 ANIKEMSFAKQLHCQVIKNGSDFDLNIKTALMVAYSKCSEIDDAFKLFCMMHGVQNVVSW 364
Query: 301 TSMIGGYAQLGYPSEAVNLFKRLLKTS-VRPNEATLATTLSACA-ELGSLSKGKEIEEYI 358
T++I GY Q G A+NLF ++ + V PNE T ++ L+ACA S+ +GK+
Sbjct: 365 TAIISGYVQNGRTDRAMNLFCQMRREEGVEPNEFTFSSVLNACAAPTASVEQGKQFHSCS 424
Query: 359 VLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQAL 418
+ +G + V ++L+ M++K G I A EVF+R D+DL W++MI+GYA HG G ++L
Sbjct: 425 IKSGFSNALCVSSALVTMYAKRGNIESANEVFKRQVDRDLVSWNSMISGYAQHGCGKKSL 484
Query: 419 NLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVD 478
+F +M+ + L+ D + + ++SAC+H+G+V++G +F M ++ I P++EHY C+VD
Sbjct: 485 KIFEEMRS-KNLELDGITFIGVISACTHAGLVNEGQRYFDLMVKDYHIVPTMEHYSCMVD 543
Query: 479 LLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGN 538
L RAG + A+ I++MP A +W LL+AC H NV+LGE AA+ L++L P +
Sbjct: 544 LYSRAGMLEKAMDLINKMPFPAGATIWRTLLAACRVHLNVQLGELAAEKLISLQPQDSAA 603
Query: 539 YILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDI 598
Y+L++N++ +AG W+E A R LMD +++ KE G+S +E+ F+AGD SH S I
Sbjct: 604 YVLLSNIYATAGNWQERAKVRKLMDMKKVKKEAGYSWIEVKNKTFSFMAGDLSHPQSDRI 663
Query: 599 RKTLKELHIKLLEAGYIAEADIV 621
L+EL I+L +AGY + V
Sbjct: 664 YLKLEELSIRLKDAGYYPDTKYV 686
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 85/293 (29%), Positives = 145/293 (49%), Gaps = 11/293 (3%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI NG E + M GV F V+K CANI + K++H V+K G
Sbjct: 265 MIAGFVTNGLDLEAFELFYRMRLEGVKLTQTIFATVIKLCANIKEMSFAKQLHCQVIKNG 324
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
D ++T L+ YSKCS+ + K+ M +++VVSW +IIS + + D A+ +
Sbjct: 325 SDFDLNIKTALMVAYSKCSEIDDAFKLFCMMH-GVQNVVSWTAIISGYVQNGRTDRAMNL 383
Query: 121 LKEMWV-LGLELSASTFVSVVSGC-----SFRQGISMHCCVYKLGLLNNEIPLANSVMSM 174
+M G+E + TF SV++ C S QG H C K G +N + +++++++M
Sbjct: 384 FCQMRREEGVEPNEFTFSSVLNACAAPTASVEQGKQFHSCSIKSG-FSNALCVSSALVTM 442
Query: 175 YAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVF 234
YAK G + A +F + +VSW ++I GY G ++ + +MR ++ D + F
Sbjct: 443 YAKRGNIESANEVFKRQVDRDLVSWNSMISGYAQHGCGKKSLKIFEEMRSKNLELDGITF 502
Query: 235 LNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNL--LVSMYTKCGDLELA 285
+ +I C G + L++K Y+ +++ +V +Y++ G LE A
Sbjct: 503 IGVISACTHAGLVNEGQRYFDLMVKD-YHIVPTMEHYSCMVDLYSRAGMLEKA 554
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 91/170 (53%), Gaps = 1/170 (0%)
Query: 285 ARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAE 344
++++FD ++ + ++ +++ EA+NLF L ++ + ++L+ L C
Sbjct: 45 SQQLFDETPQQGLSRNNHLLFEFSRNDQNKEALNLFLGLRRSGSPTDGSSLSCVLKVCGC 104
Query: 345 LGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAM 404
L GK++ + G + V TSL+ M+ K + + VF+ + K++ W+++
Sbjct: 105 LFDRIVGKQVHCQCIKCGFVEDVSVGTSLVDMYMKTESVEDGERVFDEMRVKNVVSWTSL 164
Query: 405 INGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGL 454
+ GY +G+ +QAL LF +MQ +EG+KP+ + ++L + G V+ G+
Sbjct: 165 LAGYRQNGLNEQALKLFSQMQ-LEGIKPNPFTFAAVLGGLAADGAVEKGV 213
>gi|449523792|ref|XP_004168907.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
Length = 821
Score = 394 bits (1011), Expect = e-107, Method: Compositional matrix adjust.
Identities = 211/625 (33%), Positives = 346/625 (55%), Gaps = 8/625 (1%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
M++ N S E L+ M V + F +LK C + + GK +H ++
Sbjct: 118 MLKGYAKNSSLETALAFLCRMRYDDVKPVVYNFTYLLKVCGDNADLKRGKEIHGQLITNS 177
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F + F TG+++MY+KC + K+ D MP R +VSWN+II+ S+ +A+ +
Sbjct: 178 FAANVFAMTGVVNMYAKCRQIDDAYKMFDRMPER--DLVSWNTIIAGFSQNGFAKKALEL 235
Query: 121 LKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
+ M G + T V+V+ + G S+H + G + ++ ++ MY+
Sbjct: 236 VLRMQDEGQRPDSITLVTVLPAAADVGLLMVGKSIHGYAIRAGFAK-LVNISTALADMYS 294
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K G V AR IFD + + ++VSW +++ GYV G +A + +M + P V +
Sbjct: 295 KCGSVETARLIFDGMDQKTVVSWNSMMDGYVQNGEPEKAIAVFEKMLEEGIDPTGVTIME 354
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
+ CA +G+L +H + + ++ + N L+SMY+KC +++A +F+ + ++
Sbjct: 355 ALHACADLGDLERGKFVHKFVDQLNLGSDISVMNSLISMYSKCKRVDIASDIFNNLNGRT 414
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEE 356
W +MI GYAQ G SEA+N F + ++P+ T+ + + A AEL K I
Sbjct: 415 HVSWNAMILGYAQNGRVSEALNCFSEMKSLGMKPDSFTMVSVIPALAELSVTRHAKWIHG 474
Query: 357 YIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQ 416
I+ + L+ N V T+L+ M+SKCG I+ A+++F+ + D+ + W+AMI+GY HG+G
Sbjct: 475 LIIRSCLDKNIFVTTALVDMYSKCGAIHMARKLFDMISDRHVITWNAMIDGYGTHGLGRA 534
Query: 417 ALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCL 476
AL+LF KM+ ++P+ + Y S++SACSHSG+VD+GL FKSM+ ++G+EPS++HY +
Sbjct: 535 ALDLFDKMKK-GAVEPNDITYLSVISACSHSGLVDEGLRHFKSMKQDYGLEPSMDHYGAM 593
Query: 477 VDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGST 536
VDLLGRAGR A I MP+ V+ +L AC H N+E+GE AAK L LNP
Sbjct: 594 VDLLGRAGRIKEAWDFIENMPISPGITVYGAMLGACKIHKNIEVGEKAAKKLFELNPDEG 653
Query: 537 GNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSV 596
G ++L+AN++ S W + A R M+ + L K PG S VE+ V F +G +H S
Sbjct: 654 GYHVLLANIYASTSKWSKVAEVRKTMEKKGLKKTPGCSVVELRNEVHSFYSGSTTHPQSK 713
Query: 597 DIRKTLKELHIKLLEAGYIAEADIV 621
I L+EL ++ AGY+ + +++
Sbjct: 714 RIYAFLEELVYEIKAAGYVPDTNLI 738
Score = 201 bits (512), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 128/470 (27%), Positives = 235/470 (50%), Gaps = 22/470 (4%)
Query: 56 VLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLND 115
V+K G + QT L+ ++SK + +V + + +L ++ +++++ +++ +
Sbjct: 72 VIKNGLYNEHLFQTKLVSLFSKYGSINEAARVFEPIDDKLDAL--YHTMLKGYAKNSSLE 129
Query: 116 EAILVLKEMWVLGLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSV 171
A+ L M ++ F ++ C ++G +H + N + V
Sbjct: 130 TALAFLCRMRYDDVKPVVYNFTYLLKVCGDNADLKRGKEIHGQLITNSFAANVFAMT-GV 188
Query: 172 MSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDL 231
++MYAK ++++A +FD + E +VSW TII G+ G +A L +M+ PD
Sbjct: 189 VNMYAKCRQIDDAYKMFDRMPERDLVSWNTIIAGFSQNGFAKKALELVLRMQDEGQRPDS 248
Query: 232 VVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDA 291
+ + ++ A VG L + S+H +++G+ + L MY+KCG +E AR +FD
Sbjct: 249 ITLVTVLPAAADVGLLMVGKSIHGYAIRAGFAKLVNISTALADMYSKCGSVETARLIFDG 308
Query: 292 VLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKG 351
+ +K+V W SM+ GY Q G P +A+ +F+++L+ + P T+ L ACA+LG L +G
Sbjct: 309 MDQKTVVSWNSMMDGYVQNGEPEKAIAVFEKMLEEGIDPTGVTIMEALHACADLGDLERG 368
Query: 352 KEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIH 411
K + +++ L S+ V SLI M+SKC R++ A ++F + + W+AMI GYA +
Sbjct: 369 KFVHKFVDQLNLGSDISVMNSLISMYSKCKRVDIASDIFNNLNGRTHVSWNAMILGYAQN 428
Query: 412 GMGDQALNLFYKMQHVEGLKPDAVVYTSI------LSACSHSGMVDDGLSFFKSMQSNFG 465
G +ALN F +M+ + G+KPD+ S+ LS H+ + GL + N
Sbjct: 429 GRVSEALNCFSEMKSL-GMKPDSFTMVSVIPALAELSVTRHAKWI-HGLIIRSCLDKNIF 486
Query: 466 IEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKH 515
+ + LVD+ + G +A K + +M + W ++ H
Sbjct: 487 VTTA------LVDMYSKCGAIHMARK-LFDMISDRHVITWNAMIDGYGTH 529
>gi|125529330|gb|EAY77444.1| hypothetical protein OsI_05438 [Oryza sativa Indica Group]
Length = 813
Score = 394 bits (1011), Expect = e-106, Method: Compositional matrix adjust.
Identities = 210/636 (33%), Positives = 358/636 (56%), Gaps = 23/636 (3%)
Query: 4 NSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQ 63
+S++ + + L Y ML+ V N++TFP LKAC+ + G+ +H H + G Q
Sbjct: 99 SSSSPTAAADGLHLYRRMLRHRVAPNNYTFPFALKACSALADHHCGRAIHRHAIHAGLQA 158
Query: 64 DAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAI--LVL 121
D FV T L+DMY KC+ + + MP R +V+WN++++ ++ + A+ L+
Sbjct: 159 DLFVSTALLDMYVKCACLPDAAHIFATMPAR--DLVAWNAMLAGYAHHGMYHHAVAHLLS 216
Query: 122 KEMWVLGLELSASTFVSVV----SGCSFRQGISMHCCVYKLGLLNNE---------IPLA 168
+M + L +AST V+++ + QG S+H + L +N + L
Sbjct: 217 MQMQMHRLRPNASTLVALLPLLAQQGALAQGTSVHAYRIRACLHSNRNSKSKLTDGVLLG 276
Query: 169 NSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSV- 227
+++ MYAK G + AR +FD + + V+W+ +IGG+V + +AF L M +
Sbjct: 277 TALLDMYAKCGSLLYARRVFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLC 336
Query: 228 --TPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELA 285
+P + + + CA + +L + +H+LL KSG + + N L+SMY K G ++ A
Sbjct: 337 FLSPTSIA--SALRACASLDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQA 394
Query: 286 RRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAEL 345
+FD + K +++++ GY Q G EA +FK++ +V P+ AT+ + + AC+ L
Sbjct: 395 IALFDEMAVKDTVSYSALVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHL 454
Query: 346 GSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMI 405
+L G+ +++ GL S + +LI M++KCGRI+ +++VF +P +D+ W+ MI
Sbjct: 455 AALQHGRCSHGSVIIRGLASETSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMI 514
Query: 406 NGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFG 465
GY IHG+G +A LF +M ++ G PD V + +LSACSHSG+V +G +F M+ +G
Sbjct: 515 AGYGIHGLGKEATALFLEMNNL-GFPPDGVTFICLLSACSHSGLVIEGKHWFHVMRHGYG 573
Query: 466 IEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAA 525
+ P +EHY+C+VDLL R G D A + I MP+ +VW LL AC + N++LG+ +
Sbjct: 574 LTPRMEHYICMVDLLSRGGFLDEAYEFIQSMPLRADVRVWVALLGACRVYKNIDLGKKVS 633
Query: 526 KNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVF 585
+ + L P TGN++L++N++++AG + EAA R + + K PG S +EI+GS+ F
Sbjct: 634 RMIQELGPEGTGNFVLLSNIYSAAGRFDEAAEVRIIQKVQGFKKSPGCSWIEINGSLHAF 693
Query: 586 VAGDRSHHLSVDIRKTLKELHIKLLEAGYIAEADIV 621
V GD+SH S +I + L + + + + GY + V
Sbjct: 694 VGGDQSHPQSPEIYRELDNILVGIKKLGYQPDTSFV 729
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 71/144 (49%), Gaps = 2/144 (1%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
++ NG EE + M V ++ T ++ AC+++ ++ G+ H V+ G
Sbjct: 412 LVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRG 471
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+ + LIDMY+KC SR+V + MP R +VSWN++I+ + L EA +
Sbjct: 472 LASETSICNALIDMYAKCGRIDLSRQVFNMMPS--RDIVSWNTMIAGYGIHGLGKEATAL 529
Query: 121 LKEMWVLGLELSASTFVSVVSGCS 144
EM LG TF+ ++S CS
Sbjct: 530 FLEMNNLGFPPDGVTFICLLSACS 553
>gi|225428104|ref|XP_002278241.1| PREDICTED: pentatricopeptide repeat-containing protein At4g35130,
chloroplastic [Vitis vinifera]
gi|297744563|emb|CBI37825.3| unnamed protein product [Vitis vinifera]
Length = 802
Score = 393 bits (1010), Expect = e-106, Method: Compositional matrix adjust.
Identities = 208/596 (34%), Positives = 343/596 (57%), Gaps = 9/596 (1%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MIR +NG F + + Y M GV G++FT+P V+KAC + + +G+RVH V+K G
Sbjct: 97 MIRGFVDNGLFWDAVDFYHRMEFGGVRGDNFTYPFVIKACGGLYDLAEGERVHGKVIKSG 156
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
D ++ LI MY+K S+ V EMPVR +VSWNS+IS + ++
Sbjct: 157 LDLDIYIGNSLIIMYAKIGCIESAEMVFREMPVR--DLVSWNSMISGYVSVGDGWRSLSC 214
Query: 121 LKEMWVLGLELSASTFVSVVSGCSF----RQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
+EM G++L + + ++ CS R G +HC + + L ++ + S++ MYA
Sbjct: 215 FREMQASGIKLDRFSVIGILGACSLEGFLRNGKEIHCQMMR-SRLELDVMVQTSLVDMYA 273
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRM-SVTPDLVVFL 235
K G+++ A +FD+I + SIV+W +IGGY E+F +M+ + PD + +
Sbjct: 274 KCGRMDYAERLFDQITDKSIVAWNAMIGGYSLNAQSFESFAYVRKMQEGGKLHPDWITMI 333
Query: 236 NLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEK 295
NL+ CAQ+ + L S+H +++G+ L+ LV MY +CG L+ A +F + E+
Sbjct: 334 NLLPPCAQLEAILLGKSVHGFAIRNGFLPHLVLETALVDMYGECGKLKPAECLFGQMNER 393
Query: 296 SVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIE 355
++ W +MI Y + G +A+ LF+ L +++P+ T+A+ L A AEL SL + ++I
Sbjct: 394 NLISWNAMIASYTKNGENRKAMTLFQDLCNKTLKPDATTIASILPAYAELASLREAEQIH 453
Query: 356 EYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGD 415
Y+ L+SN V S++ M+ KCG + +A+E+F+R+ KD+ W+ +I YAIHG G
Sbjct: 454 GYVTKLKLDSNTFVSNSIVFMYGKCGNLLRAREIFDRMTFKDVISWNTVIMAYAIHGFGR 513
Query: 416 QALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLC 475
++ LF +M+ +G +P+ + S+L +CS +G+V++G +F SM+ ++ I P IEHY C
Sbjct: 514 ISIELFSEMRE-KGFEPNGSTFVSLLLSCSVAGLVNEGWEYFNSMKRDYNINPGIEHYGC 572
Query: 476 LVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGS 535
++DL+GR G D A I EMP+ A++W LL+A +VEL E AA+++L+L +
Sbjct: 573 ILDLIGRTGNLDHAKNFIEEMPLAPTARIWGSLLTASRNKGDVELAEIAAEHILSLEHDN 632
Query: 536 TGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRS 591
TG Y+L++N++ AG W++ + M L K G S V++ FV DRS
Sbjct: 633 TGCYVLLSNMYAEAGRWEDVERIKFHMKKEGLEKSVGCSVVDLSSKTFRFVNQDRS 688
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 89/318 (27%), Positives = 159/318 (50%), Gaps = 1/318 (0%)
Query: 172 MSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDL 231
+S Y + G + A +F+ + + W +I G+V+ G +A ++M V D
Sbjct: 67 LSSYVERGYMKNALDLFENMRQCDTFIWNVMIRGFVDNGLFWDAVDFYHRMEFGGVRGDN 126
Query: 232 VVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDA 291
+ +I C + +L +H ++KSG + + + N L+ MY K G +E A VF
Sbjct: 127 FTYPFVIKACGGLYDLAEGERVHGKVIKSGLDLDIYIGNSLIIMYAKIGCIESAEMVFRE 186
Query: 292 VLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKG 351
+ + + W SMI GY +G +++ F+ + + ++ + ++ L AC+ G L G
Sbjct: 187 MPVRDLVSWNSMISGYVSVGDGWRSLSCFREMQASGIKLDRFSVIGILGACSLEGFLRNG 246
Query: 352 KEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIH 411
KEI ++ + LE + VQTSL+ M++KCGR++ A+ +F+++ DK + W+AMI GY+++
Sbjct: 247 KEIHCQMMRSRLELDVMVQTSLVDMYAKCGRMDYAERLFDQITDKSIVAWNAMIGGYSLN 306
Query: 412 GMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIE 471
++ KMQ L PD + ++L C+ + G S N G P +
Sbjct: 307 AQSFESFAYVRKMQEGGKLHPDWITMINLLPPCAQLEAILLGKSVHGFAIRN-GFLPHLV 365
Query: 472 HYLCLVDLLGRAGRFDLA 489
LVD+ G G+ A
Sbjct: 366 LETALVDMYGECGKLKPA 383
Score = 41.2 bits (95), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 31/138 (22%), Positives = 65/138 (47%), Gaps = 4/138 (2%)
Query: 363 LESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFY 422
+E N T + + + G + A ++FE + D +W+ MI G+ +G+ A++ ++
Sbjct: 56 VERNSVSLTRALSSYVERGYMKNALDLFENMRQCDTFIWNVMIRGFVDNGLFWDAVDFYH 115
Query: 423 KMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFF-KSMQSNFGIEPSIEHYLCLVDLLG 481
+M+ G++ D Y ++ AC + +G K ++S ++ I + L+ +
Sbjct: 116 RME-FGGVRGDNFTYPFVIKACGGLYDLAEGERVHGKVIKSGLDLDIYIGN--SLIIMYA 172
Query: 482 RAGRFDLALKTIHEMPVE 499
+ G + A EMPV
Sbjct: 173 KIGCIESAEMVFREMPVR 190
>gi|15236277|ref|NP_195239.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75098809|sp|O49619.1|PP350_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g35130, chloroplastic; Flags: Precursor
gi|2924523|emb|CAA17777.1| putative protein [Arabidopsis thaliana]
gi|7270464|emb|CAB80230.1| putative protein [Arabidopsis thaliana]
gi|332661071|gb|AEE86471.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 804
Score = 393 bits (1009), Expect = e-106, Method: Compositional matrix adjust.
Identities = 210/600 (35%), Positives = 348/600 (58%), Gaps = 18/600 (3%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI+ T+ G + E + YS M+ GV ++FT+P V+K+ A I+S+ +GK++H+ V+K+G
Sbjct: 101 MIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTYPFVIKSVAGISSLEEGKKIHAMVIKLG 160
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F D +V LI +Y K + KV +EMP R +VSWNS+IS + ++++
Sbjct: 161 FVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPER--DIVSWNSMISGYLALGDGFSSLML 218
Query: 121 LKEMWVLGLELSASTFVSVVSGCSF----RQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
KEM G + + +S + CS + G +HC + + ++ + S++ MY+
Sbjct: 219 FKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVRSRIETGDVMVMTSILDMYS 278
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMS----VTPDLV 232
K+G+V+ A IF+ + + +IV+W +IG Y G V +AF LC Q +MS + PD++
Sbjct: 279 KYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAF-LCFQ--KMSEQNGLQPDVI 335
Query: 233 VFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAV 292
+NL+ A + ++H ++ G+ L+ L+ MY +CG L+ A +FD +
Sbjct: 336 TSINLLPASA----ILEGRTIHGYAMRRGFLPHMVLETALIDMYGECGQLKSAEVIFDRM 391
Query: 293 LEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGK 352
EK+V W S+I Y Q G A+ LF+ L +S+ P+ T+A+ L A AE SLS+G+
Sbjct: 392 AEKNVISWNSIIAAYVQNGKNYSALELFQELWDSSLVPDSTTIASILPAYAESLSLSEGR 451
Query: 353 EIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHG 412
EI YIV + SN + SL+HM++ CG + A++ F + KD+ W+++I YA+HG
Sbjct: 452 EIHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDARKCFNHILLKDVVSWNSIIMAYAVHG 511
Query: 413 MGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEH 472
G ++ LF +M + P+ + S+L+ACS SGMVD+G +F+SM+ +GI+P IEH
Sbjct: 512 FGRISVWLFSEMI-ASRVNPNKSTFASLLAACSISGMVDEGWEYFESMKREYGIDPGIEH 570
Query: 473 YLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLN 532
Y C++DL+GR G F A + + EMP A++W LL+A H ++ + E+AA+ + +
Sbjct: 571 YGCMLDLIGRTGNFSAAKRFLEEMPFVPTARIWGSLLNASRNHKDITIAEFAAEQIFKME 630
Query: 533 PGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSH 592
+TG Y+L+ N++ AG W++ + LM+ + +++ S VE G VF GDRSH
Sbjct: 631 HDNTGCYVLLLNMYAEAGRWEDVNRIKLLMESKGISRTSSRSTVEAKGKSHVFTNGDRSH 690
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 93/347 (26%), Positives = 170/347 (48%), Gaps = 7/347 (2%)
Query: 166 PLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRM 225
P + +A + +A +FDE+ + W +I G+ + G EA ++M
Sbjct: 65 PALTRALRGFADSRLMEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFA 124
Query: 226 SVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELA 285
V D + +I A + +L +H++++K G+ ++ + N L+S+Y K G A
Sbjct: 125 GVKADTFTYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDA 184
Query: 286 RRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAEL 345
+VF+ + E+ + W SMI GY LG ++ LFK +LK +P+ + + L AC+ +
Sbjct: 185 EKVFEEMPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHV 244
Query: 346 GSLSKGKEIEEYIVLNGLES-NRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAM 404
S GKEI + V + +E+ + V TS++ M+SK G ++ A+ +F + +++ W+ M
Sbjct: 245 YSPKMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVM 304
Query: 405 INGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNF 464
I YA +G A F KM GL+PD + ++L A S +++ +M+
Sbjct: 305 IGCYARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPA---SAILEGRTIHGYAMRR-- 359
Query: 465 GIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSA 511
G P + L+D+ G G+ A + I + E W +++A
Sbjct: 360 GFLPHMVLETALIDMYGECGQLKSA-EVIFDRMAEKNVISWNSIIAA 405
>gi|125573515|gb|EAZ15030.1| hypothetical protein OsJ_04972 [Oryza sativa Japonica Group]
Length = 813
Score = 393 bits (1009), Expect = e-106, Method: Compositional matrix adjust.
Identities = 210/636 (33%), Positives = 357/636 (56%), Gaps = 23/636 (3%)
Query: 4 NSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQ 63
+S++ + + L Y ML+ V N++TFP LKAC+ + G+ +H H + G Q
Sbjct: 99 SSSSPTAAADGLHLYRRMLRHRVAPNNYTFPFALKACSALADHHCGRAIHRHAIHAGLQA 158
Query: 64 DAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAI--LVL 121
D FV T L+DMY KC+ + + MP R +V+WN++++ ++ + A+ L+
Sbjct: 159 DLFVSTALLDMYVKCACLPDAAHIFATMPAR--DLVAWNAMLAGYAHHGMYHHAVAHLLS 216
Query: 122 KEMWVLGLELSASTFVSVV----SGCSFRQGISMHCCVYKLGL---------LNNEIPLA 168
+M + L +AST V+++ + QG S+H + L L + + L
Sbjct: 217 MQMQMHRLRPNASTLVALLPLLAQQGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLG 276
Query: 169 NSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSV- 227
+++ MYAK G + AR +FD + + V+W+ +IGG+V + +AF L M +
Sbjct: 277 TALLDMYAKCGSLLYARRVFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLC 336
Query: 228 --TPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELA 285
+P + + + CA + +L + +H+LL KSG + + N L+SMY K G ++ A
Sbjct: 337 FLSPTSIA--SALRACASLDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQA 394
Query: 286 RRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAEL 345
+FD + K +++++ GY Q G EA +FK++ +V P+ AT+ + + AC+ L
Sbjct: 395 IALFDEMAVKDTVSYSALVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHL 454
Query: 346 GSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMI 405
+L G+ +++ GL S + +LI M++KCGRI+ +++VF +P +D+ W+ MI
Sbjct: 455 AALQHGRCSHGSVIIRGLASETSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMI 514
Query: 406 NGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFG 465
GY IHG+G +A LF +M ++ G PD V + +LSACSHSG+V +G +F M +G
Sbjct: 515 AGYGIHGLGKEATALFLEMNNL-GFPPDGVTFICLLSACSHSGLVIEGKHWFHVMGHGYG 573
Query: 466 IEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAA 525
+ P +EHY+C+VDLL R G D A + I MP+ +VW LL AC + N++LG+ +
Sbjct: 574 LTPRMEHYICMVDLLSRGGFLDEAYEFIQSMPLRADVRVWVALLGACRVYKNIDLGKKVS 633
Query: 526 KNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVF 585
+ + L P TGN++L++N++++AG + EAA R + + K PG S +EI+GS+ F
Sbjct: 634 RMIQELGPEGTGNFVLLSNIYSAAGRFDEAAEVRIIQKVQGFKKSPGCSWIEINGSLHAF 693
Query: 586 VAGDRSHHLSVDIRKTLKELHIKLLEAGYIAEADIV 621
V GD+SH S +I + L + + + + GY + V
Sbjct: 694 VGGDQSHPQSPEIYRELDNILVGIKKLGYQPDTSFV 729
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 71/144 (49%), Gaps = 2/144 (1%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
++ NG EE + M V ++ T ++ AC+++ ++ G+ H V+ G
Sbjct: 412 LVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRG 471
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+ + LIDMY+KC SR+V + MP R +VSWN++I+ + L EA +
Sbjct: 472 LASETSICNALIDMYAKCGRIDLSRQVFNMMPS--RDIVSWNTMIAGYGIHGLGKEATAL 529
Query: 121 LKEMWVLGLELSASTFVSVVSGCS 144
EM LG TF+ ++S CS
Sbjct: 530 FLEMNNLGFPPDGVTFICLLSACS 553
>gi|224119336|ref|XP_002331286.1| predicted protein [Populus trichocarpa]
gi|222873711|gb|EEF10842.1| predicted protein [Populus trichocarpa]
Length = 897
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 212/625 (33%), Positives = 338/625 (54%), Gaps = 8/625 (1%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI N E L + M GV + + + ++CA ++++ GK +HSH LK
Sbjct: 253 MIAGCVQNDRNVEGLELFKEMQGVGVGVSQSIYASLFRSCAALSALRLGKELHSHALKSA 312
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F D V T +DMY+KC ++KVL MP S+ S+N+II ++R+ +A+
Sbjct: 313 FGSDIIVGTATLDMYAKCGRMADAQKVLSSMPKC--SLQSYNAIIVGYARSDRGFQALKS 370
Query: 121 LKEMWVLGLELSASTFVSVVSGC-SFR---QGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
+ + GL T ++ C S R +G +H K ++N I +AN+++ MY
Sbjct: 371 FQLLLKTGLGFDEITLSGALNACASIRGDLEGRQVHGLAVKSISMSN-ICVANAILDMYG 429
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K + EA +FD + VSW II GN E M + PD + +
Sbjct: 430 KCKALAEASDLFDMMERRDAVSWNAIIAACEQNGNEEETLAHFASMIHSRMEPDDFTYGS 489
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
++ CA L + +H+ ++KSG + + LV MY KCG +E A ++ D +K+
Sbjct: 490 VLKACAGRQALNTGMEIHTRIIKSGMGFDSFVGAALVDMYCKCGMIEKADKIHDRTEQKT 549
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEE 356
+ W ++I G++ L +A F R+L+ V P+ T A L CA L ++ GK+I
Sbjct: 550 MVSWNAIISGFSLLQQSEDAHKFFSRMLEMGVNPDNFTYAAVLDTCANLATVGLGKQIHA 609
Query: 357 YIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQ 416
I+ L+S+ + ++L+ M+SKCG + ++ +FE+ P++D W+AM+ GYA HG+G++
Sbjct: 610 QIIKQELQSDVYICSTLVDMYSKCGNMQDSQLMFEKAPNRDFVTWNAMLCGYAHHGLGEE 669
Query: 417 ALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCL 476
AL LF MQ V +KP+ + S+L AC+H G+VD GL +F M S +G++P EHY C+
Sbjct: 670 ALKLFESMQLV-NVKPNHATFVSVLRACAHMGLVDKGLHYFDVMLSEYGLDPQSEHYSCM 728
Query: 477 VDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGST 536
VD+LGR+GR D AL + +MP E A +W LLS C H NVE+ E A + LL L+P +
Sbjct: 729 VDILGRSGRIDEALNLVQKMPFEADAVIWRNLLSVCKIHGNVEVAEKATRALLQLDPQDS 788
Query: 537 GNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSV 596
+L++N++ AGMW + R +M +L KEPG S +E+ V F+ GD+ H
Sbjct: 789 SACVLLSNIYADAGMWGNVSEMRKMMRHNKLKKEPGCSWIELKDEVHAFLVGDKGHPRDE 848
Query: 597 DIRKTLKELHIKLLEAGYIAEADIV 621
+I + L L ++ GYI + D++
Sbjct: 849 EIYEKLGVLIGEMQSVGYIPDCDVL 873
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 136/526 (25%), Positives = 242/526 (46%), Gaps = 17/526 (3%)
Query: 7 NNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAF 66
NG +++ + M + GV + + +VLKAC + G +VH V+K GF D
Sbjct: 158 QNGECRKSIDVFLEMGRCGVGFDRASLAVVLKACGALEECDMGVQVHGLVVKFGFDCDVV 217
Query: 67 VQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWV 126
+ L+ MY+KC S V E+P ++ VSW+++I+ + N E + + KEM
Sbjct: 218 TGSALLGMYAKCKRLDDSLSVFSELPE--KNWVSWSAMIAGCVQNDRNVEGLELFKEMQG 275
Query: 127 LGLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVN 182
+G+ +S S + S+ C + R G +H K ++I + + + MYAK G++
Sbjct: 276 VGVGVSQSIYASLFRSCAALSALRLGKELHSHALK-SAFGSDIIVGTATLDMYAKCGRMA 334
Query: 183 EARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCA 242
+A+ + + + S+ S+ II GY +A + + + D + + CA
Sbjct: 335 DAQKVLSSMPKCSLQSYNAIIVGYARSDRGFQALKSFQLLLKTGLGFDEITLSGALNACA 394
Query: 243 QVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTS 302
+ +H L +KS + + N ++ MY KC L A +FD + + W +
Sbjct: 395 SIRGDLEGRQVHGLAVKSISMSNICVANAILDMYGKCKALAEASDLFDMMERRDAVSWNA 454
Query: 303 MIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNG 362
+I Q G E + F ++ + + P++ T + L ACA +L+ G EI I+ +G
Sbjct: 455 IIAACEQNGNEEETLAHFASMIHSRMEPDDFTYGSVLKACAGRQALNTGMEIHTRIIKSG 514
Query: 363 LESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFY 422
+ + V +L+ M+ KCG I KA ++ +R K + W+A+I+G+++ + A F
Sbjct: 515 MGFDSFVGAALVDMYCKCGMIEKADKIHDRTEQKTMVSWNAIISGFSLLQQSEDAHKFFS 574
Query: 423 KMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLC--LVDLL 480
+M + G+ PD Y ++L C++ V G + E + Y+C LVD+
Sbjct: 575 RMLEM-GVNPDNFTYAAVLDTCANLATVGLGKQIHAQIIKQ---ELQSDVYICSTLVDMY 630
Query: 481 GRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAK 526
+ G + + P W +L HH LGE A K
Sbjct: 631 SKCGNMQDSQLMFEKAP-NRDFVTWNAMLCG-YAHHG--LGEEALK 672
Score = 185 bits (469), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 140/525 (26%), Positives = 251/525 (47%), Gaps = 43/525 (8%)
Query: 23 QTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKC---- 78
QT TF + + C+ NS+ GK+ H+ ++ GF+ FV L+ MY KC
Sbjct: 42 QTQPPAKIRTFSHIYQECSKQNSLNPGKQAHARMIFCGFEPTTFVSNCLMQMYIKCLYLD 101
Query: 79 -----------SDFVS----------------SRKVLDEMPVRLRSVVSWNSIISAHSRA 111
D VS +RK EMP R VVSWNS+IS +
Sbjct: 102 YACKVFDKMYLRDVVSYNSIISGYASCGEMDIARKFFYEMPER--DVVSWNSVISGFLQN 159
Query: 112 CLNDEAILVLKEMWVLGLELSASTFVSVVSGCSFRQ----GISMHCCVYKLGLLNNEIPL 167
++I V EM G+ ++ V+ C + G+ +H V K G + ++
Sbjct: 160 GECRKSIDVFLEMGRCGVGFDRASLAVVLKACGALEECDMGVQVHGLVVKFGF-DCDVVT 218
Query: 168 ANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSV 227
++++ MYAK +++++ S+F E+ E + VSW+ +I G V E L +M+ + V
Sbjct: 219 GSALLGMYAKCKRLDDSLSVFSELPEKNWVSWSAMIAGCVQNDRNVEGLELFKEMQGVGV 278
Query: 228 TPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARR 287
++ +L CA + L L +HS LKS + ++ + + MY KCG + A++
Sbjct: 279 GVSQSIYASLFRSCAALSALRLGKELHSHALKSAFGSDIIVGTATLDMYAKCGRMADAQK 338
Query: 288 VFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGS 347
V ++ + S+ + ++I GYA+ +A+ F+ LLKT + +E TL+ L+ACA +
Sbjct: 339 VLSSMPKCSLQSYNAIIVGYARSDRGFQALKSFQLLLKTGLGFDEITLSGALNACASIRG 398
Query: 348 LSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMING 407
+G+++ V + SN V +++ M+ KC + +A ++F+ + +D W+A+I
Sbjct: 399 DLEGRQVHGLAVKSISMSNICVANAILDMYGKCKALAEASDLFDMMERRDAVSWNAIIAA 458
Query: 408 YAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFF-KSMQSNFGI 466
+G ++ L F M H ++PD Y S+L AC+ ++ G+ + ++S G
Sbjct: 459 CEQNGNEEETLAHFASMIHSR-MEPDDFTYGSVLKACAGRQALNTGMEIHTRIIKSGMGF 517
Query: 467 EPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSA 511
+ + LVD+ + G + A K IH+ + W ++S
Sbjct: 518 DSFVG--AALVDMYCKCGMIEKADK-IHDRTEQKTMVSWNAIISG 559
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 98/356 (27%), Positives = 174/356 (48%), Gaps = 13/356 (3%)
Query: 169 NSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVT 228
NS++S YA G+++ AR F E+ E +VSW ++I G++ G ++ + +M R V
Sbjct: 119 NSIISGYASCGEMDIARKFFYEMPERDVVSWNSVISGFLQNGECRKSIDVFLEMGRCGVG 178
Query: 229 PDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRV 288
D ++ C + + + +H L++K G++ + + L+ MY KC L+ + V
Sbjct: 179 FDRASLAVVLKACGALEECDMGVQVHGLVVKFGFDCDVVTGSALLGMYAKCKRLDDSLSV 238
Query: 289 FDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSL 348
F + EK+ W++MI G Q E + LFK + V +++ A+ +CA L +L
Sbjct: 239 FSELPEKNWVSWSAMIAGCVQNDRNVEGLELFKEMQGVGVGVSQSIYASLFRSCAALSAL 298
Query: 349 SKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGY 408
GKE+ + + + S+ V T+ + M++KCGR+ A++V +P L ++A+I GY
Sbjct: 299 RLGKELHSHALKSAFGSDIIVGTATLDMYAKCGRMADAQKVLSSMPKCSLQSYNAIIVGY 358
Query: 409 AIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSH-----SGMVDDGLSFFKSMQSN 463
A G QAL F + GL D + + L+AC+ G GL+ SN
Sbjct: 359 ARSDRGFQALKSFQLLLKT-GLGFDEITLSGALNACASIRGDLEGRQVHGLAVKSISMSN 417
Query: 464 FGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVE 519
+ +I +D+ G+ A + +M A W +++AC ++ N E
Sbjct: 418 ICVANAI------LDMYGKCKALAEA-SDLFDMMERRDAVSWNAIIAACEQNGNEE 466
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/244 (21%), Positives = 98/244 (40%), Gaps = 43/244 (17%)
Query: 313 PSEAVNLFKRLLKTSVRPNEA--TLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQ 370
P N F L + +P T + C++ SL+ GK+ ++ G E V
Sbjct: 28 PPIPTNNFSTLAQNQTQPPAKIRTFSHIYQECSKQNSLNPGKQAHARMIFCGFEPTTFVS 87
Query: 371 TSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGL 430
L+ M+ KC ++ A +VF+++ +D+ ++++I+GYA G D A FY+M
Sbjct: 88 NCLMQMYIKCLYLDYACKVFDKMYLRDVVSYNSIISGYASCGEMDIARKFFYEMP----- 142
Query: 431 KPDAVVYTSILSACSHSGMVDDGLSFFKSMQS---------------------------- 462
+ D V + S++S +G + F M
Sbjct: 143 ERDVVSWNSVISGFLQNGECRKSIDVFLEMGRCGVGFDRASLAVVLKACGALEECDMGVQ 202
Query: 463 ------NFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKH- 515
FG + + L+ + + R D +L E+P E W+ +++ C+++
Sbjct: 203 VHGLVVKFGFDCDVVTGSALLGMYAKCKRLDDSLSVFSELP-EKNWVSWSAMIAGCVQND 261
Query: 516 HNVE 519
NVE
Sbjct: 262 RNVE 265
>gi|359488315|ref|XP_002278668.2| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Vitis vinifera]
Length = 877
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 205/625 (32%), Positives = 347/625 (55%), Gaps = 8/625 (1%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+I N L + M + GV + TF V ++CA ++++ G ++H H LK
Sbjct: 246 IIAGCVQNDDLRGGLELFKEMQKAGVGVSQSTFASVFRSCAGLSALRLGSQLHGHALKTD 305
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F D + T +DMY KC++ ++K+ + +P ++ S+N+II ++R+ EA+ +
Sbjct: 306 FGTDVVIGTATLDMYMKCNNLSDAQKLFNSLPNH--NLQSYNAIIVGYARSDKGIEALGM 363
Query: 121 LKEMWVLGLELSASTFVSVVSGCSF----RQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
+ + GL L + C+ +G+ +H K L + I +AN+++ MY
Sbjct: 364 FRLLQKSGLGLDEVSLSGAFRACAVIKGDLEGLQVHGLSMK-SLCQSNICVANAILDMYG 422
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K G + EA +F+E+ VSW II + GN + L M + + PD + +
Sbjct: 423 KCGALVEACLVFEEMVSRDAVSWNAIIAAHEQNGNEEKTLSLFVWMLQSGMEPDEFTYGS 482
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
++ CA L + +H+ ++KS + + L+ MY+KCG +E A ++ D + E++
Sbjct: 483 VLKACAGWQALNCGMEIHNRIIKSRLGLDSFVGIALIDMYSKCGMMEKAEKLHDRLAEQT 542
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEE 356
V W ++I G++ EA F ++L+ V P+ T AT L CA L ++ GK+I
Sbjct: 543 VVSWNAIISGFSLQKQSEEAQKTFSKMLEMGVDPDNFTYATILDTCANLVTVELGKQIHA 602
Query: 357 YIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQ 416
I+ L+S+ + ++L+ M+SKCG + + +FE+ P++D W+AM+ GYA HG+G++
Sbjct: 603 QIIKKELQSDAYISSTLVDMYSKCGNMQDFQLIFEKAPNRDFVTWNAMVCGYAQHGLGEE 662
Query: 417 ALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCL 476
AL +F MQ +E +KP+ + ++L AC H G+V+ GL +F SM SN+G++P +EHY C+
Sbjct: 663 ALKIFEYMQ-LENVKPNHATFLAVLRACGHMGLVEKGLHYFHSMLSNYGLDPQLEHYSCV 721
Query: 477 VDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGST 536
VD++GR+G+ AL+ I MP E A +W LLS C H NVE+ E AA ++L L P +
Sbjct: 722 VDIMGRSGQVSKALELIEGMPFEADAVIWRTLLSICKIHGNVEVAEKAAYSILQLEPEDS 781
Query: 537 GNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSV 596
Y+L++N++ +AGMW E R +M L KEPG S +EI V F+ GD++H S
Sbjct: 782 AAYVLLSNIYANAGMWNEVTKLRKMMRFNGLKKEPGCSWIEIKSEVHAFLVGDKAHPRSK 841
Query: 597 DIRKTLKELHIKLLEAGYIAEADIV 621
+I + L L ++ GY+ + D +
Sbjct: 842 EIYENLDVLTDEMKWVGYMPDTDFI 866
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 144/539 (26%), Positives = 260/539 (48%), Gaps = 31/539 (5%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+I +NG + + + M + G + TF +VLK+C+++ G ++H +K+G
Sbjct: 145 LISGYLHNGDHRKVIDVFLQMGRMGTVFDRTTFAVVLKSCSSLEDHGGGIQIHGLAVKMG 204
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDE---- 116
F D + L+DMY+KC S + MP ++ VSW++II+ C+ ++
Sbjct: 205 FDCDVVTGSALLDMYAKCKKLDCSIQFFHSMPE--KNWVSWSAIIA----GCVQNDDLRG 258
Query: 117 AILVLKEMWVLGLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVM 172
+ + KEM G+ +S STF SV C + R G +H K ++ + + +
Sbjct: 259 GLELFKEMQKAGVGVSQSTFASVFRSCAGLSALRLGSQLHGHALKTD-FGTDVVIGTATL 317
Query: 173 SMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLV 232
MY K +++A+ +F+ + ++ S+ II GY EA G+ +++ + D V
Sbjct: 318 DMYMKCNNLSDAQKLFNSLPNHNLQSYNAIIVGYARSDKGIEALGMFRLLQKSGLGLDEV 377
Query: 233 VFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAV 292
CA + L +H L +KS + + N ++ MY KCG L A VF+ +
Sbjct: 378 SLSGAFRACAVIKGDLEGLQVHGLSMKSLCQSNICVANAILDMYGKCGALVEACLVFEEM 437
Query: 293 LEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGK 352
+ + W ++I + Q G + ++LF +L++ + P+E T + L ACA +L+ G
Sbjct: 438 VSRDAVSWNAIIAAHEQNGNEEKTLSLFVWMLQSGMEPDEFTYGSVLKACAGWQALNCGM 497
Query: 353 EIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHG 412
EI I+ + L + V +LI M+SKCG + KA+++ +R+ ++ + W+A+I+G+++
Sbjct: 498 EIHNRIIKSRLGLDSFVGIALIDMYSKCGMMEKAEKLHDRLAEQTVVSWNAIISGFSLQK 557
Query: 413 MGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFF-----KSMQSNFGIE 467
++A F KM + G+ PD Y +IL C++ V+ G K +QS+ I
Sbjct: 558 QSEEAQKTFSKMLEM-GVDPDNFTYATILDTCANLVTVELGKQIHAQIIKKELQSDAYIS 616
Query: 468 PSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAK 526
+ LVD+ + G + I E W ++ +H LGE A K
Sbjct: 617 ST------LVDMYSKCGNMQ-DFQLIFEKAPNRDFVTWNAMVCGYAQHG---LGEEALK 665
Score = 189 bits (480), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 133/514 (25%), Positives = 248/514 (48%), Gaps = 39/514 (7%)
Query: 32 TFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEM 91
TF + + C++ ++ GK+ H+ ++ F+ FV LI MY KCSD + KV D M
Sbjct: 44 TFSHIFQECSDRKALCPGKQAHARMILTEFKPTVFVTNCLIQMYIKCSDLEFAFKVFDGM 103
Query: 92 PVR-----------------------------LRSVVSWNSIISAHSRACLNDEAILVLK 122
P R R VVSWNS+IS + + + I V
Sbjct: 104 PQRDTVSWNAMLFGYAGRGDIGVAQKLFDAMPERDVVSWNSLISGYLHNGDHRKVIDVFL 163
Query: 123 EMWVLGLELSASTFVSVVSGCSFRQ----GISMHCCVYKLGLLNNEIPLANSVMSMYAKF 178
+M +G +TF V+ CS + GI +H K+G + ++ ++++ MYAK
Sbjct: 164 QMGRMGTVFDRTTFAVVLKSCSSLEDHGGGIQIHGLAVKMGF-DCDVVTGSALLDMYAKC 222
Query: 179 GKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLI 238
K++ + F + E + VSW+ II G V ++ L +M++ V F ++
Sbjct: 223 KKLDCSIQFFHSMPEKNWVSWSAIIAGCVQNDDLRGGLELFKEMQKAGVGVSQSTFASVF 282
Query: 239 LGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVF 298
CA + L L +H LK+ + + + + MY KC +L A+++F+++ ++
Sbjct: 283 RSCAGLSALRLGSQLHGHALKTDFGTDVVIGTATLDMYMKCNNLSDAQKLFNSLPNHNLQ 342
Query: 299 LWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYI 358
+ ++I GYA+ EA+ +F+ L K+ + +E +L+ ACA + +G ++
Sbjct: 343 SYNAIIVGYARSDKGIEALGMFRLLQKSGLGLDEVSLSGAFRACAVIKGDLEGLQVHGLS 402
Query: 359 VLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQAL 418
+ + +SN V +++ M+ KCG + +A VFE + +D W+A+I + +G ++ L
Sbjct: 403 MKSLCQSNICVANAILDMYGKCGALVEACLVFEEMVSRDAVSWNAIIAAHEQNGNEEKTL 462
Query: 419 NLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFF-KSMQSNFGIEPSIEHYLCLV 477
+LF M G++PD Y S+L AC+ ++ G+ + ++S G++ + + L+
Sbjct: 463 SLFVWMLQ-SGMEPDEFTYGSVLKACAGWQALNCGMEIHNRIIKSRLGLDSFVG--IALI 519
Query: 478 DLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSA 511
D+ + G + A K +H+ E W ++S
Sbjct: 520 DMYSKCGMMEKAEK-LHDRLAEQTVVSWNAIISG 552
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 95/356 (26%), Positives = 177/356 (49%), Gaps = 13/356 (3%)
Query: 169 NSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVT 228
N+++ YA G + A+ +FD + E +VSW ++I GY++ G+ + + QM RM
Sbjct: 112 NAMLFGYAGRGDIGVAQKLFDAMPERDVVSWNSLISGYLHNGDHRKVIDVFLQMGRMGTV 171
Query: 229 PDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRV 288
D F ++ C+ + + + +H L +K G++ + + L+ MY KC L+ + +
Sbjct: 172 FDRTTFAVVLKSCSSLEDHGGGIQIHGLAVKMGFDCDVVTGSALLDMYAKCKKLDCSIQF 231
Query: 289 FDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSL 348
F ++ EK+ W+++I G Q + LFK + K V +++T A+ +CA L +L
Sbjct: 232 FHSMPEKNWVSWSAIIAGCVQNDDLRGGLELFKEMQKAGVGVSQSTFASVFRSCAGLSAL 291
Query: 349 SKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGY 408
G ++ + + ++ + T+ + M+ KC ++ A+++F +P+ +L ++A+I GY
Sbjct: 292 RLGSQLHGHALKTDFGTDVVIGTATLDMYMKCNNLSDAQKLFNSLPNHNLQSYNAIIVGY 351
Query: 409 AIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACS-----HSGMVDDGLSFFKSMQSN 463
A G +AL +F +Q GL D V + AC+ G+ GLS QSN
Sbjct: 352 ARSDKGIEALGMFRLLQK-SGLGLDEVSLSGAFRACAVIKGDLEGLQVHGLSMKSLCQSN 410
Query: 464 FGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVE 519
+ +I +D+ G+ G A EM V A W +++A ++ N E
Sbjct: 411 ICVANAI------LDMYGKCGALVEACLVFEEM-VSRDAVSWNAIIAAHEQNGNEE 459
>gi|18418348|ref|NP_567948.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635622|sp|O81767.2|PP348_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g33990; AltName: Full=Protein EMBRYO DEFECTIVE 2758
gi|332660906|gb|AEE86306.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 823
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 216/629 (34%), Positives = 364/629 (57%), Gaps = 20/629 (3%)
Query: 1 MIRNSTNNGSFEETLSTYS-SMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKV 59
MI G+ E + +S ML +G+ + TFP VLKAC ++ DG ++H LK
Sbjct: 123 MISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKAC---RTVIDGNKIHCLALKF 179
Query: 60 GFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAIL 119
GF D +V LI +YS+ ++R + DEMPVR + SWN++IS + ++ EA+
Sbjct: 180 GFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVR--DMGSWNAMISGYCQSGNAKEALT 237
Query: 120 VLKEMWVLGLE-LSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSM 174
+ GL + + T VS++S C+ F +G+++H K GL +E+ ++N ++ +
Sbjct: 238 LSN-----GLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGL-ESELFVSNKLIDL 291
Query: 175 YAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVF 234
YA+FG++ + + +FD + ++SW +II Y A L +MR + PD +
Sbjct: 292 YAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTL 351
Query: 235 LNLILGCAQVGNLFLALSMHSLLLKSGYNNED-PLDNLLVSMYTKCGDLELARRVFDAVL 293
++L +Q+G++ S+ L+ G+ ED + N +V MY K G ++ AR VF+ +
Sbjct: 352 ISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLP 411
Query: 294 EKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKT-SVRPNEATLATTLSACAELGSLSKGK 352
V W ++I GYAQ G+ SEA+ ++ + + + N+ T + L AC++ G+L +G
Sbjct: 412 NTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGM 471
Query: 353 EIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHG 412
++ ++ NGL + V TSL M+ KCGR+ A +F ++P + W+ +I + HG
Sbjct: 472 KLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHG 531
Query: 413 MGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEH 472
G++A+ LF +M EG+KPD + + ++LSACSHSG+VD+G F+ MQ+++GI PS++H
Sbjct: 532 HGEKAVMLFKEMLD-EGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKH 590
Query: 473 YLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLN 532
Y C+VD+ GRAG+ + ALK I M ++ A +W LLSAC H NV+LG+ A+++L +
Sbjct: 591 YGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVE 650
Query: 533 PGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSH 592
P G ++L++N++ SAG W+ R + + L K PGWS +E+D V+VF G+++H
Sbjct: 651 PEHVGYHVLLSNMYASAGKWEGVDEIRSIAHGKGLRKTPGWSSMEVDNKVEVFYTGNQTH 710
Query: 593 HLSVDIRKTLKELHIKLLEAGYIAEADIV 621
+ ++ + L L KL GY+ + V
Sbjct: 711 PMYEEMYRELTALQAKLKMIGYVPDHRFV 739
Score = 127 bits (318), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 84/288 (29%), Positives = 148/288 (51%), Gaps = 15/288 (5%)
Query: 165 IPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRR 224
+ ++ ++++Y G V AR FD I + +W +I GY GN +E C +
Sbjct: 86 VCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISGYGRAGNSSEVI-RCFSLFM 144
Query: 225 MS--VTPDLVVFLNLILGCAQV--GNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCG 280
+S +TPD F +++ C V GN +H L LK G+ + + L+ +Y++
Sbjct: 145 LSSGLTPDYRTFPSVLKACRTVIDGN-----KIHCLALKFGFMWDVYVAASLIHLYSRYK 199
Query: 281 DLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLS 340
+ AR +FD + + + W +MI GY Q G EA+ L L + T+ + LS
Sbjct: 200 AVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGLRAM----DSVTVVSLLS 255
Query: 341 ACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAV 400
AC E G ++G I Y + +GLES V LI ++++ GR+ ++VF+R+ +DL
Sbjct: 256 ACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLIS 315
Query: 401 WSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSG 448
W+++I Y ++ +A++LF +M+ + ++PD + S+ S S G
Sbjct: 316 WNSIIKAYELNEQPLRAISLFQEMR-LSRIQPDCLTLISLASILSQLG 362
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 76/256 (29%), Positives = 123/256 (48%), Gaps = 12/256 (4%)
Query: 246 NLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIG 305
NL A +H+ L+ S + LV++Y G++ LAR FD + + V+ W MI
Sbjct: 66 NLQSAKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMIS 125
Query: 306 GYAQLGYPSEAVNLFKR-LLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLE 364
GY + G SE + F +L + + P+ T + L AC ++ G +I + G
Sbjct: 126 GYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACR---TVIDGNKIHCLALKFGFM 182
Query: 365 SNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKM 424
+ V SLIH++S+ + A+ +F+ +P +D+ W+AMI+GY G +AL L
Sbjct: 183 WDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTL---- 238
Query: 425 QHVEGLKP-DAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRA 483
GL+ D+V S+LSAC+ +G + G++ S G+E + L+DL
Sbjct: 239 --SNGLRAMDSVTVVSLLSACTEAGDFNRGVT-IHSYSIKHGLESELFVSNKLIDLYAEF 295
Query: 484 GRFDLALKTIHEMPVE 499
GR K M V
Sbjct: 296 GRLRDCQKVFDRMYVR 311
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 77/188 (40%), Gaps = 12/188 (6%)
Query: 347 SLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMIN 406
+L K + +V++ N + L++++ G + A+ F+ + ++D+ W+ MI+
Sbjct: 66 NLQSAKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMIS 125
Query: 407 GYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGI 466
GY G + + F GL PD + S+L AC V DG + + FG
Sbjct: 126 GYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACR---TVIDG-NKIHCLALKFGF 181
Query: 467 EPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAK 526
+ L+ L R A EMPV W ++S + N AK
Sbjct: 182 MWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGS-WNAMISGYCQSGN-------AK 233
Query: 527 NLLTLNPG 534
LTL+ G
Sbjct: 234 EALTLSNG 241
>gi|168042957|ref|XP_001773953.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162674797|gb|EDQ61301.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 905
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 216/615 (35%), Positives = 344/615 (55%), Gaps = 9/615 (1%)
Query: 12 EETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGL 71
+E L + M G+ + T+ +L A + + +GKR+H ++ G D V T L
Sbjct: 211 KECLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDEGKRIHKLTVEEGLNSDIRVGTAL 270
Query: 72 IDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLEL 131
+ M +C D S+++ + R VV +N++I+A ++ N EA M G+ L
Sbjct: 271 VTMCVRCGDVDSAKQAFK--GIADRDVVVYNALIAALAQHGHNVEAFEQYYRMRSDGVAL 328
Query: 132 SASTFVSVVSGCSFRQGIS----MHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSI 187
+ +T++S+++ CS + + +H + + G ++++ + N+++SMYA+ G + +AR +
Sbjct: 329 NRTTYLSILNACSTSKALEAGKLIHSHISEDGH-SSDVQIGNALISMYARCGDLPKAREL 387
Query: 188 FDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNL 247
F + + ++SW II GY + EA L QM+ V P V FL+L+ CA
Sbjct: 388 FYTMPKRDLISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHLLSACANSSAY 447
Query: 248 FLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGY 307
+H +L+SG + L N L++MY +CG L A+ VF+ + V W SMI G+
Sbjct: 448 ADGKMIHEDILRSGIKSNGHLANALMNMYRRCGSLMEAQNVFEGTQARDVISWNSMIAGH 507
Query: 308 AQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNR 367
AQ G A LF+ + + P+ T A+ LS C +L GK+I I +GL+ +
Sbjct: 508 AQHGSYETAYKLFQEMQNEELEPDNITFASVLSGCKNPEALELGKQIHGRITESGLQLDV 567
Query: 368 QVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHV 427
+ +LI+M+ +CG + A+ VF + +D+ W+AMI G A G +A+ LF++MQ+
Sbjct: 568 NLGNALINMYIRCGSLQDARNVFHSLQHRDVMSWTAMIGGCADQGEDMKAIELFWQMQN- 626
Query: 428 EGLKP-DAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRF 486
EG +P D +TSILSAC+H+G+V +G F SM+S +G+ P+IEHY CLV LLGRA RF
Sbjct: 627 EGFRPPDGSTFTSILSACNHAGLVLEGYQIFSSMESEYGVLPTIEHYGCLVGLLGRARRF 686
Query: 487 DLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLF 546
A I++MP A VW LL AC H N+ L E+AA N L LN + YIL++N++
Sbjct: 687 QEAETLINQMPFPPDAAVWETLLGACRIHGNIALAEHAANNALKLNARNPAVYILLSNVY 746
Query: 547 TSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKELH 606
+AG W + A R +M+ R + KEPG S +E+D + F+A DRSH + +I LK L
Sbjct: 747 AAAGRWDDVAKIRRVMEGRGIRKEPGRSWIEVDNIIHEFIAADRSHPETAEIYAELKRLS 806
Query: 607 IKLLEAGYIAEADIV 621
+++ EAGY + V
Sbjct: 807 VEMEEAGYFPDTQHV 821
Score = 247 bits (631), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 140/456 (30%), Positives = 240/456 (52%), Gaps = 10/456 (2%)
Query: 2 IRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGF 61
+RN + G E +S T + T+ +L+ C + + KR+H+ +++ G
Sbjct: 1 MRNERHCGPDREDVSNTHQPRPTET--DRATYVALLQNCTRKRLLPEAKRIHAQMVEAGV 58
Query: 62 QQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVL 121
D F+ LI+MY KC + + +V EMP R V+SWNS+IS +++ +A +
Sbjct: 59 GPDIFLSNLLINMYVKCRSVLDAHQVFKEMP--RRDVISWNSLISCYAQQGFKKKAFQLF 116
Query: 122 KEMWVLGLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAK 177
+EM G + T++S+++ C G +H + K G + + NS++SMY K
Sbjct: 117 EEMQNAGFIPNKITYISILTACYSPAELENGKKIHSQIIKAG-YQRDPRVQNSLLSMYGK 175
Query: 178 FGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNL 237
G + AR +F I +VS+ T++G Y V E GL QM ++PD V ++NL
Sbjct: 176 CGDLPRARQVFAGISPRDVVSYNTMLGLYAQKAYVKECLGLFGQMSSEGISPDKVTYINL 235
Query: 238 ILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSV 297
+ L +H L ++ G N++ + LV+M +CGD++ A++ F + ++ V
Sbjct: 236 LDAFTTPSMLDEGKRIHKLTVEEGLNSDIRVGTALVTMCVRCGDVDSAKQAFKGIADRDV 295
Query: 298 FLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEY 357
++ ++I AQ G+ EA + R+ V N T + L+AC+ +L GK I +
Sbjct: 296 VVYNALIAALAQHGHNVEAFEQYYRMRSDGVALNRTTYLSILNACSTSKALEAGKLIHSH 355
Query: 358 IVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQA 417
I +G S+ Q+ +LI M+++CG + KA+E+F +P +DL W+A+I GYA +A
Sbjct: 356 ISEDGHSSDVQIGNALISMYARCGDLPKARELFYTMPKRDLISWNAIIAGYARREDRGEA 415
Query: 418 LNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDG 453
+ L+ +MQ EG+KP V + +LSAC++S DG
Sbjct: 416 MRLYKQMQ-SEGVKPGRVTFLHLLSACANSSAYADG 450
Score = 237 bits (605), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 138/516 (26%), Positives = 263/516 (50%), Gaps = 10/516 (1%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+I G ++ + M G N T+ +L AC + + +GK++HS ++K G
Sbjct: 99 LISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTACYSPAELENGKKIHSQIIKAG 158
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+Q+D VQ L+ MY KC D +R+V + R VVS+N+++ +++ E + +
Sbjct: 159 YQRDPRVQNSLLSMYGKCGDLPRARQVF--AGISPRDVVSYNTMLGLYAQKAYVKECLGL 216
Query: 121 LKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
+M G+ T+++++ + +G +H + G LN++I + ++++M
Sbjct: 217 FGQMSSEGISPDKVTYINLLDAFTTPSMLDEGKRIHKLTVEEG-LNSDIRVGTALVTMCV 275
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
+ G V+ A+ F I + +V + +I G+ EAF +MR V + +L+
Sbjct: 276 RCGDVDSAKQAFKGIADRDVVVYNALIAALAQHGHNVEAFEQYYRMRSDGVALNRTTYLS 335
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
++ C+ L +HS + + G++++ + N L+SMY +CGDL AR +F + ++
Sbjct: 336 ILNACSTSKALEAGKLIHSHISEDGHSSDVQIGNALISMYARCGDLPKARELFYTMPKRD 395
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEE 356
+ W ++I GYA+ EA+ L+K++ V+P T LSACA + + GK I E
Sbjct: 396 LISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHLLSACANSSAYADGKMIHE 455
Query: 357 YIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQ 416
I+ +G++SN + +L++M+ +CG + +A+ VFE +D+ W++MI G+A HG +
Sbjct: 456 DILRSGIKSNGHLANALMNMYRRCGSLMEAQNVFEGTQARDVISWNSMIAGHAQHGSYET 515
Query: 417 ALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCL 476
A LF +MQ+ E L+PD + + S+LS C + ++ G + + G++ + L
Sbjct: 516 AYKLFQEMQNEE-LEPDNITFASVLSGCKNPEALELGKQIHGRITES-GLQLDVNLGNAL 573
Query: 477 VDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSAC 512
+++ R G A H + W ++ C
Sbjct: 574 INMYIRCGSLQDARNVFHSLQ-HRDVMSWTAMIGGC 608
Score = 188 bits (477), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 108/372 (29%), Positives = 194/372 (52%), Gaps = 7/372 (1%)
Query: 130 ELSASTFVSVVSGCSFR----QGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEAR 185
E +T+V+++ C+ + + +H + + G+ +I L+N +++MY K V +A
Sbjct: 24 ETDRATYVALLQNCTRKRLLPEAKRIHAQMVEAGV-GPDIFLSNLLINMYVKCRSVLDAH 82
Query: 186 SIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVG 245
+F E+ ++SW ++I Y G +AF L +M+ P+ + +++++ C
Sbjct: 83 QVFKEMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTACYSPA 142
Query: 246 NLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIG 305
L +HS ++K+GY + + N L+SMY KCGDL AR+VF + + V + +M+G
Sbjct: 143 ELENGKKIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGISPRDVVSYNTMLG 202
Query: 306 GYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLES 365
YAQ Y E + LF ++ + P++ T L A L +GK I + V GL S
Sbjct: 203 LYAQKAYVKECLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDEGKRIHKLTVEEGLNS 262
Query: 366 NRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQ 425
+ +V T+L+ M +CG ++ AK+ F+ + D+D+ V++A+I A HG +A +Y+M+
Sbjct: 263 DIRVGTALVTMCVRCGDVDSAKQAFKGIADRDVVVYNALIAALAQHGHNVEAFEQYYRMR 322
Query: 426 HVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGR 485
+G+ + Y SIL+ACS S ++ G S S G ++ L+ + R G
Sbjct: 323 -SDGVALNRTTYLSILNACSTSKALEAG-KLIHSHISEDGHSSDVQIGNALISMYARCGD 380
Query: 486 FDLALKTIHEMP 497
A + + MP
Sbjct: 381 LPKARELFYTMP 392
>gi|449458783|ref|XP_004147126.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
Length = 821
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 210/625 (33%), Positives = 344/625 (55%), Gaps = 8/625 (1%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
M++ N S E L+ M V + F +LK C + + GK +H ++
Sbjct: 118 MLKGYAKNSSLETALAFLCRMRYDDVKPVVYNFTYLLKVCGDNADLKRGKEIHGQLITNS 177
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F + F TG+++MY+KC + K+ D MP R +VSWN+II+ S+ +A+ +
Sbjct: 178 FAANVFAMTGVVNMYAKCRQIDDAYKMFDRMPER--DLVSWNTIIAGFSQNGFAKKALEL 235
Query: 121 LKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
+ M G + T V+V+ + G S+H + G + ++ ++ MY+
Sbjct: 236 VLRMQDEGQRPDSITLVTVLPAAADVGLLMVGKSIHGYAIRAGFAK-LVNISTALADMYS 294
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K G V AR IFD + + ++VSW +++ GYV G +A + +M + P V +
Sbjct: 295 KCGSVETARLIFDGMDQKTVVSWNSMMDGYVQNGEPEKAIAVFEKMLEEGIDPTGVTIME 354
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
+ CA +G+L +H + + ++ + N L+SMY+KC +++A +F+ + ++
Sbjct: 355 ALHACADLGDLERGKFVHKFVDQLNLGSDISVMNSLISMYSKCKRVDIASDIFNNLNGRT 414
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEE 356
W +MI GYAQ G SEA+N F + ++P+ T+ + + A AEL K I
Sbjct: 415 HVSWNAMILGYAQNGRVSEALNCFSEMKSLGMKPDSFTMVSVIPALAELSVTRHAKWIHG 474
Query: 357 YIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQ 416
I+ + L+ N V T+L+ M+SKCG I+ A+++F+ + D+ + W+AMI+GY HG+G
Sbjct: 475 LIIRSCLDKNIFVTTALVDMYSKCGAIHMARKLFDMISDRHVITWNAMIDGYGTHGLGRA 534
Query: 417 ALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCL 476
AL+LF KM+ ++P+ + Y S++SACSHSG+VD+GL FKSM+ ++G+EPS++HY +
Sbjct: 535 ALDLFDKMKK-GAVEPNDITYLSVISACSHSGLVDEGLRHFKSMKQDYGLEPSMDHYGAM 593
Query: 477 VDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGST 536
VDLLGRAGR A I MP+ V+ AC H N+E+GE AAK L LNP
Sbjct: 594 VDLLGRAGRIKEAWDFIENMPISPGITVYGAXXGACKIHKNIEVGEKAAKKLFELNPDEG 653
Query: 537 GNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSV 596
G ++L+AN++ S W + A R M+ + L K PG S VE+ V F +G +H S
Sbjct: 654 GYHVLLANIYASTSKWSKVAEVRKTMEKKGLKKTPGCSVVELRNEVHSFYSGSTTHPQSK 713
Query: 597 DIRKTLKELHIKLLEAGYIAEADIV 621
I L+EL ++ AGY+ + +++
Sbjct: 714 RIYAFLEELVYEIKAAGYVPDTNLI 738
Score = 202 bits (513), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 128/470 (27%), Positives = 235/470 (50%), Gaps = 22/470 (4%)
Query: 56 VLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLND 115
V+K G + QT L+ ++SK + +V + + +L ++ +++++ +++ +
Sbjct: 72 VIKNGLYNEHLFQTKLVSLFSKYGSINEAARVFEPIDDKLDAL--YHTMLKGYAKNSSLE 129
Query: 116 EAILVLKEMWVLGLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSV 171
A+ L M ++ F ++ C ++G +H + N + V
Sbjct: 130 TALAFLCRMRYDDVKPVVYNFTYLLKVCGDNADLKRGKEIHGQLITNSFAANVFAMT-GV 188
Query: 172 MSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDL 231
++MYAK ++++A +FD + E +VSW TII G+ G +A L +M+ PD
Sbjct: 189 VNMYAKCRQIDDAYKMFDRMPERDLVSWNTIIAGFSQNGFAKKALELVLRMQDEGQRPDS 248
Query: 232 VVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDA 291
+ + ++ A VG L + S+H +++G+ + L MY+KCG +E AR +FD
Sbjct: 249 ITLVTVLPAAADVGLLMVGKSIHGYAIRAGFAKLVNISTALADMYSKCGSVETARLIFDG 308
Query: 292 VLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKG 351
+ +K+V W SM+ GY Q G P +A+ +F+++L+ + P T+ L ACA+LG L +G
Sbjct: 309 MDQKTVVSWNSMMDGYVQNGEPEKAIAVFEKMLEEGIDPTGVTIMEALHACADLGDLERG 368
Query: 352 KEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIH 411
K + +++ L S+ V SLI M+SKC R++ A ++F + + W+AMI GYA +
Sbjct: 369 KFVHKFVDQLNLGSDISVMNSLISMYSKCKRVDIASDIFNNLNGRTHVSWNAMILGYAQN 428
Query: 412 GMGDQALNLFYKMQHVEGLKPDAVVYTSI------LSACSHSGMVDDGLSFFKSMQSNFG 465
G +ALN F +M+ + G+KPD+ S+ LS H+ + GL + N
Sbjct: 429 GRVSEALNCFSEMKSL-GMKPDSFTMVSVIPALAELSVTRHAKWI-HGLIIRSCLDKNIF 486
Query: 466 IEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKH 515
+ + LVD+ + G +A K + +M + W ++ H
Sbjct: 487 VTTA------LVDMYSKCGAIHMARK-LFDMISDRHVITWNAMIDGYGTH 529
>gi|225438557|ref|XP_002276001.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g39530-like [Vitis vinifera]
Length = 825
Score = 390 bits (1002), Expect = e-105, Method: Compositional matrix adjust.
Identities = 218/622 (35%), Positives = 361/622 (58%), Gaps = 10/622 (1%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+I T G +L ++ M +T V + + VL AC+ + + GK++H++VL+ G
Sbjct: 201 IIAGYTKCGRSAVSLELFAQMRETNVVPDRYVVSSVLSACSMLEFLEGGKQIHAYVLRRG 260
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+ D V LID Y+KC+ + RK+ D+M V+ +++SW ++IS + + + EA+ +
Sbjct: 261 TEMDVSVVNVLIDFYTKCNRVKAGRKLFDQMVVK--NIISWTTMISGYMQNSFDWEAMKL 318
Query: 121 LKEMWVLGLELSASTFVSVVSGCSFR----QGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
EM LG + SV++ C R QG +H K L ++E + N ++ MYA
Sbjct: 319 FGEMNRLGWKPDGFACTSVLTSCGSREALEQGRQVHAYTIKANLESDEF-VKNGLIDMYA 377
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K + +A+ +FD + E +++S+ +I GY + ++EA L ++MR P L+ F++
Sbjct: 378 KSNLLIDAKKVFDVMAEQNVISYNAMIEGYSSQEKLSEALELFHEMRVRLFPPSLLTFVS 437
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
L+ A + L L+ +H L++K G + + + L+ +Y+KC ++ AR VF+ + EK
Sbjct: 438 LLGVSASLFALELSKQIHGLIIKFGVSLDLFAGSALIDVYSKCSYVKDARHVFEEMNEKD 497
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEE 356
+ +W +M GY Q EA+ L+ L + +PNE T A ++A + L SL G++
Sbjct: 498 IVVWNAMFFGYTQHLENEEALKLYSTLQFSRQKPNEFTFAALITAASNLASLRHGQQFHN 557
Query: 357 YIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQ 416
+V GL+ V +L+ M++KCG I +A+++F +D+ W++MI+ +A HG ++
Sbjct: 558 QLVKMGLDFCPFVTNALVDMYAKCGSIEEARKMFNSSIWRDVVCWNSMISTHAQHGEAEE 617
Query: 417 ALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCL 476
AL +F +M EG++P+ V + ++LSACSH+G V+DGL+ F SM FGI+P EHY C+
Sbjct: 618 ALGMFREMMK-EGIQPNYVTFVAVLSACSHAGRVEDGLNHFNSM-PGFGIKPGTEHYACV 675
Query: 477 VDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGST 536
V LLGR+G+ A + I +MP+E A VW LLSAC NVELG+YAA+ ++ +P +
Sbjct: 676 VSLLGRSGKLFEAKEFIEKMPIEPAAIVWRSLLSACRIAGNVELGKYAAEMAISTDPKDS 735
Query: 537 GNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSV 596
G+YIL++N+F S GMW + R MD + KEPG S +E++ V VF+A D +H
Sbjct: 736 GSYILLSNIFASKGMWADVKKVRDRMDSSEVVKEPGRSWIEVNNKVNVFIARDTTHR-EA 794
Query: 597 DIRKTLKELHIKLLEAGYIAEA 618
DI L L + AGY+ +A
Sbjct: 795 DIGSVLDILIQHIKGAGYVPDA 816
Score = 211 bits (537), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 141/526 (26%), Positives = 257/526 (48%), Gaps = 15/526 (2%)
Query: 1 MIRNSTNNGSFEETLSTYSSM-LQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKV 59
M+ + G EE L + + ++G H N F V++AC + + G ++H V++
Sbjct: 99 MVSMYSQQGYSEEALMVFVDLQRKSGEHPNEFVLASVIRACTQLGVVEKGAQLHGFVVRS 158
Query: 60 GFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAIL 119
GF QD +V T LID YSK + +R V D++ ++ V+W +II+ +++ + ++
Sbjct: 159 GFDQDVYVGTSLIDFYSKNGNIEEARLVFDQLSE--KTAVTWTTIIAGYTKCGRSAVSLE 216
Query: 120 VLKEMWVLGLELSASTFVSVVSGCSFRQ----GISMHCCVYKLGLLNNEIPLANSVMSMY 175
+ +M + SV+S CS + G +H V + G ++ + N ++ Y
Sbjct: 217 LFAQMRETNVVPDRYVVSSVLSACSMLEFLEGGKQIHAYVLRRG-TEMDVSVVNVLIDFY 275
Query: 176 AKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFL 235
K +V R +FD++ +I+SWTT+I GY+ EA L +M R+ PD
Sbjct: 276 TKCNRVKAGRKLFDQMVVKNIISWTTMISGYMQNSFDWEAMKLFGEMNRLGWKPDGFACT 335
Query: 236 NLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEK 295
+++ C L +H+ +K+ +++ + N L+ MY K L A++VFD + E+
Sbjct: 336 SVLTSCGSREALEQGRQVHAYTIKANLESDEFVKNGLIDMYAKSNLLIDAKKVFDVMAEQ 395
Query: 296 SVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIE 355
+V + +MI GY+ SEA+ LF + P+ T + L A L +L K+I
Sbjct: 396 NVISYNAMIEGYSSQEKLSEALELFHEMRVRLFPPSLLTFVSLLGVSASLFALELSKQIH 455
Query: 356 EYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGD 415
I+ G+ + ++LI ++SKC + A+ VFE + +KD+ VW+AM GY H +
Sbjct: 456 GLIIKFGVSLDLFAGSALIDVYSKCSYVKDARHVFEEMNEKDIVVWNAMFFGYTQHLENE 515
Query: 416 QALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIE--PSIEHY 473
+AL L+ +Q KP+ + ++++A S+ + G F + G++ P + +
Sbjct: 516 EALKLYSTLQFSRQ-KPNEFTFAALITAASNLASLRHGQQFHNQL-VKMGLDFCPFVTN- 572
Query: 474 LCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVE 519
LVD+ + G + A K + + W ++S +H E
Sbjct: 573 -ALVDMYAKCGSIEEARKMFNS-SIWRDVVCWNSMISTHAQHGEAE 616
Score = 210 bits (534), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 119/414 (28%), Positives = 227/414 (54%), Gaps = 9/414 (2%)
Query: 33 FPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMP 92
F +L+ + N I K +H ++ G Q D F+ LI++ SK ++R V D+MP
Sbjct: 30 FANLLQLSISRNPIIHYKIIHGQIIVSGLQSDTFLANILINVCSKSDRVDNARVVFDKMP 89
Query: 93 VRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVL-GLELSASTFVSVVSGCS----FRQ 147
+++++W+S++S +S+ ++EA++V ++ G + SV+ C+ +
Sbjct: 90 --HKNLITWSSMVSMYSQQGYSEEALMVFVDLQRKSGEHPNEFVLASVIRACTQLGVVEK 147
Query: 148 GISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYV 207
G +H V + G + ++ + S++ Y+K G + EAR +FD++ E + V+WTTII GY
Sbjct: 148 GAQLHGFVVRSGF-DQDVYVGTSLIDFYSKNGNIEEARLVFDQLSEKTAVTWTTIIAGYT 206
Query: 208 NVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDP 267
G + L QMR +V PD V +++ C+ + L +H+ +L+ G +
Sbjct: 207 KCGRSAVSLELFAQMRETNVVPDRYVVSSVLSACSMLEFLEGGKQIHAYVLRRGTEMDVS 266
Query: 268 LDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTS 327
+ N+L+ YTKC ++ R++FD ++ K++ WT+MI GY Q + EA+ LF + +
Sbjct: 267 VVNVLIDFYTKCNRVKAGRKLFDQMVVKNIISWTTMISGYMQNSFDWEAMKLFGEMNRLG 326
Query: 328 VRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAK 387
+P+ + L++C +L +G+++ Y + LES+ V+ LI M++K + AK
Sbjct: 327 WKPDGFACTSVLTSCGSREALEQGRQVHAYTIKANLESDEFVKNGLIDMYAKSNLLIDAK 386
Query: 388 EVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSIL 441
+VF+ + ++++ ++AMI GY+ +AL LF++M+ V P + + S+L
Sbjct: 387 KVFDVMAEQNVISYNAMIEGYSSQEKLSEALELFHEMR-VRLFPPSLLTFVSLL 439
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 93/188 (49%), Gaps = 2/188 (1%)
Query: 327 SVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKA 386
++RP A L + K I I+++GL+S+ + LI++ SK R++ A
Sbjct: 22 NLRPKRREFANLLQLSISRNPIIHYKIIHGQIIVSGLQSDTFLANILINVCSKSDRVDNA 81
Query: 387 KEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSH 446
+ VF+++P K+L WS+M++ Y+ G ++AL +F +Q G P+ V S++ AC+
Sbjct: 82 RVVFDKMPHKNLITWSSMVSMYSQQGYSEEALMVFVDLQRKSGEHPNEFVLASVIRACTQ 141
Query: 447 SGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWA 506
G+V+ G + + G + + L+D + G + A + + + E A W
Sbjct: 142 LGVVEKGAQLHGFVVRS-GFDQDVYVGTSLIDFYSKNGNIEEA-RLVFDQLSEKTAVTWT 199
Query: 507 PLLSACMK 514
+++ K
Sbjct: 200 TIIAGYTK 207
>gi|224073070|ref|XP_002303960.1| predicted protein [Populus trichocarpa]
gi|222841392|gb|EEE78939.1| predicted protein [Populus trichocarpa]
Length = 704
Score = 390 bits (1001), Expect = e-105, Method: Compositional matrix adjust.
Identities = 208/623 (33%), Positives = 355/623 (56%), Gaps = 8/623 (1%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
M++ + S + LS +S M V + F +LK C + + + GK +H V+ G
Sbjct: 1 MLKGYAKSSSLDSALSFFSRMKHDSVRPVVYNFTYLLKLCGDNSDLKRGKEIHGSVITSG 60
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F + F TG+++MY+KC + + D MP R +V WN++IS +++ A+++
Sbjct: 61 FSWNLFAMTGVVNMYAKCRQINDAYNMFDRMPER--DLVCWNTMISGYAQNGFAKVALML 118
Query: 121 LKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
+ M G + T VS++ + R G+++H V + G + + ++ +++ MY+
Sbjct: 119 VLRMSEEGHRPDSITIVSILPAVADTRLLRIGMAVHGYVLRAGF-ESLVNVSTALVDMYS 177
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K G V+ AR IFD + ++VSW ++I GYV G+ A + +M V P V +
Sbjct: 178 KCGSVSIARVIFDGMDHRTVVSWNSMIDGYVQSGDAEGAMLIFQKMLDEGVQPTNVTVMG 237
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
+ CA +G+L +H L+ + +++ + N L+SMY+KC +++A +F + K+
Sbjct: 238 ALHACADLGDLERGKFVHKLVDQLKLDSDVSVMNSLISMYSKCKRVDIAADIFKNLRNKT 297
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEE 356
+ W +MI GYAQ G +EA+N F + +++P+ T+ + + A AEL + K I
Sbjct: 298 LVSWNAMILGYAQNGCVNEALNAFCEMQSRNIKPDSFTMVSVIPALAELSIPRQAKWIHG 357
Query: 357 YIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQ 416
++ L+ N V T+L+ M++KCG I+ A+++F+ + + + W+AMI+GY HG+G
Sbjct: 358 LVIRRFLDKNVFVMTALVDMYAKCGAIHTARKLFDMMNARHVITWNAMIDGYGTHGLGKT 417
Query: 417 ALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCL 476
++ LF +M+ +KP+ + + LSACSHSG+V++GL FF+SM+ ++GIEP+++HY +
Sbjct: 418 SVELFKEMKK-GTIKPNDITFLCALSACSHSGLVEEGLCFFESMKKDYGIEPTMDHYGAM 476
Query: 477 VDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGST 536
VDLLGRAGR + A I +MP++ V+ +L AC H NV+LGE AA + LNP
Sbjct: 477 VDLLGRAGRLNQAWDFIQKMPIKPGITVYGAMLGACKIHKNVDLGEKAAFEIFKLNPDDG 536
Query: 537 GNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSV 596
G ++L+AN++ +A MW + A R +M+ L K PG S VEI V F +G SH S
Sbjct: 537 GYHVLLANIYATASMWGKVAKVRTIMEKSGLQKTPGCSLVEIGNEVHSFYSGTTSHPQSK 596
Query: 597 DIRKTLKELHIKLLEAGYIAEAD 619
I L+ L ++ AGY+ + +
Sbjct: 597 KIYSYLETLVDEIRAAGYVPDTN 619
>gi|297743497|emb|CBI36364.3| unnamed protein product [Vitis vinifera]
Length = 832
Score = 389 bits (1000), Expect = e-105, Method: Compositional matrix adjust.
Identities = 211/619 (34%), Positives = 349/619 (56%), Gaps = 37/619 (5%)
Query: 11 FEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTG 70
+ E + ML+ GV ++FTF L+ C + S GK+VHS ++ GF+ D FV
Sbjct: 156 YMEAWGIFDRMLKIGVCPDNFTFASALRVCGALRSRDGGKQVHSKLIACGFKGDTFVGNA 215
Query: 71 LIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSR-ACLNDEAILVLK-EMWVLG 128
LIDMY+KC D S KV DEM R + V+WNSIISA ++ ND +L L+ + G
Sbjct: 216 LIDMYAKCDDEESCLKVFDEMGER--NQVTWNSIISAEAQFGHFNDALVLFLRMQESEDG 273
Query: 129 LELSASTFVSVVSGCSFR----QGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEA 184
++ TF ++++ C+ + QG +H + + + N I + ++ MY++ G++N A
Sbjct: 274 IQPDQFTFTTLLTLCANQRNDNQGRQIHAHLIRANITKN-IIVETELVHMYSECGRLNYA 332
Query: 185 RSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQV 244
+ IF+ + E + SW ++I GY G EA L QM+ + PD +++ C +
Sbjct: 333 KEIFNRMAERNAYSWNSMIEGYQQNGETQEALRLFKQMQLNGIKPDCFSLSSMLSSCVSL 392
Query: 245 GNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEK--SVFLWTS 302
+ +H+ ++++ E L +LV MY KCG ++ A +V+D ++K + LW S
Sbjct: 393 SDSQKGRELHNFIVRNTMEEEGILQVVLVDMYAKCGSMDYAWKVYDQTIKKDRNTALWNS 452
Query: 303 MIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNG 362
++ GYA G E+ N F +L++ + + T+ T I +VL
Sbjct: 453 ILAGYANKGLKKESFNHFLEMLESDIEYDVLTMVT----------------IVNLLVL-- 494
Query: 363 LESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFY 422
+T+L+ M+SKCG I KA+ VF+ + K++ W+AMI+GY+ HG +AL L+
Sbjct: 495 -------ETALVDMYSKCGAITKARTVFDNMNGKNIVSWNAMISGYSKHGCSKEALILYE 547
Query: 423 KMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGR 482
+M +G+ P+ V + +ILSACSH+G+V++GL F SMQ ++ IE EHY C+VDLLGR
Sbjct: 548 EMPK-KGMYPNEVTFLAILSACSHTGLVEEGLRIFTSMQEDYNIEAKAEHYTCMVDLLGR 606
Query: 483 AGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILM 542
AGR + A + + +MP+E + W LL AC H ++++G AA+ L L+P + G Y++M
Sbjct: 607 AGRLEDAKEFVEKMPIEPEVSTWGALLGACRVHKDMDMGRLAAQRLFELDPQNPGPYVIM 666
Query: 543 ANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTL 602
+N++ +AG WKE R +M + + K+PG S +EI+ +Q+F AG ++H + +I L
Sbjct: 667 SNIYAAAGRWKEVEDIRQMMKMKGVKKDPGVSWIEINSEIQIFHAGSKTHPKTEEIYNNL 726
Query: 603 KELHIKLLEAGYIAEADIV 621
+ L ++ GYI + +
Sbjct: 727 RHLTLQSKGLGYIPDTSFI 745
Score = 210 bits (534), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 118/407 (28%), Positives = 218/407 (53%), Gaps = 14/407 (3%)
Query: 29 NSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKC---SDFVSSR 85
N + +++ C + NS GK +H+ ++ G+ DA++ T ++ +Y++ D +R
Sbjct: 70 NPLPYSSLIQDCIDSNSFQRGKSIHTQMISNGYNPDAYLMTKILMLYARSGCLDDLCYAR 129
Query: 86 KVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGC-- 143
K+ +EMP R++ +WN++I A++R EA + M +G+ TF S + C
Sbjct: 130 KLFEEMPE--RNLTAWNTMILAYARVDDYMEAWGIFDRMLKIGVCPDNFTFASALRVCGA 187
Query: 144 --SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTT 201
S G +H + G + + N+++ MYAK +FDE+GE + V+W +
Sbjct: 188 LRSRDGGKQVHSKLIACGFKGDTF-VGNALIDMYAKCDDEESCLKVFDEMGERNQVTWNS 246
Query: 202 IIGGYVNVGNVNEAFGLCNQMRRMS--VTPDLVVFLNLILGCAQVGNLFLALSMHSLLLK 259
II G+ N+A L +M+ + PD F L+ CA N +H+ L++
Sbjct: 247 IISAEAQFGHFNDALVLFLRMQESEDGIQPDQFTFTTLLTLCANQRNDNQGRQIHAHLIR 306
Query: 260 SGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNL 319
+ ++ LV MY++CG L A+ +F+ + E++ + W SMI GY Q G EA+ L
Sbjct: 307 ANITKNIIVETELVHMYSECGRLNYAKEIFNRMAERNAYSWNSMIEGYQQNGETQEALRL 366
Query: 320 FKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSK 379
FK++ ++P+ +L++ LS+C L KG+E+ +IV N +E +Q L+ M++K
Sbjct: 367 FKQMQLNGIKPDCFSLSSMLSSCVSLSDSQKGRELHNFIVRNTMEEEGILQVVLVDMYAK 426
Query: 380 CGRINKAKEVFERV--PDKDLAVWSAMINGYAIHGMGDQALNLFYKM 424
CG ++ A +V+++ D++ A+W++++ GYA G+ ++ N F +M
Sbjct: 427 CGSMDYAWKVYDQTIKKDRNTALWNSILAGYANKGLKKESFNHFLEM 473
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 115/386 (29%), Positives = 210/386 (54%), Gaps = 13/386 (3%)
Query: 136 FVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNE---ARSIF 188
+ S++ C SF++G S+H + G N + L ++ +YA+ G +++ AR +F
Sbjct: 74 YSSLIQDCIDSNSFQRGKSIHTQMISNGY-NPDAYLMTKILMLYARSGCLDDLCYARKLF 132
Query: 189 DEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLF 248
+E+ E ++ +W T+I Y V + EA+G+ ++M ++ V PD F + + C + +
Sbjct: 133 EEMPERNLTAWNTMILAYARVDDYMEAWGIFDRMLKIGVCPDNFTFASALRVCGALRSRD 192
Query: 249 LALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYA 308
+HS L+ G+ + + N L+ MY KC D E +VFD + E++ W S+I A
Sbjct: 193 GGKQVHSKLIACGFKGDTFVGNALIDMYAKCDDEESCLKVFDEMGERNQVTWNSIISAEA 252
Query: 309 QLGYPSEAVNLFKRLLKTS--VRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESN 366
Q G+ ++A+ LF R+ ++ ++P++ T T L+ CA + ++G++I +++ + N
Sbjct: 253 QFGHFNDALVLFLRMQESEDGIQPDQFTFTTLLTLCANQRNDNQGRQIHAHLIRANITKN 312
Query: 367 RQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQH 426
V+T L+HM+S+CGR+N AKE+F R+ +++ W++MI GY +G +AL LF +MQ
Sbjct: 313 IIVETELVHMYSECGRLNYAKEIFNRMAERNAYSWNSMIEGYQQNGETQEALRLFKQMQ- 371
Query: 427 VEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRF 486
+ G+KPD +S+LS+C G + N E I + LVD+ + G
Sbjct: 372 LNGIKPDCFSLSSMLSSCVSLSDSQKGRELHNFIVRNTMEEEGILQ-VVLVDMYAKCGSM 430
Query: 487 DLALKTIHE-MPVEVQAQVWAPLLSA 511
D A K + + + +W +L+
Sbjct: 431 DYAWKVYDQTIKKDRNTALWNSILAG 456
Score = 122 bits (305), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 77/309 (24%), Positives = 147/309 (47%), Gaps = 26/309 (8%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI NG +E L + M G+ + F+ +L +C +++ G+ +H+ +++
Sbjct: 350 MIEGYQQNGETQEALRLFKQMQLNGIKPDCFSLSSMLSSCVSLSDSQKGRELHNFIVRNT 409
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+++ +Q L+DMY+KC + KV D+ + R+ WNSI++ ++ L E+
Sbjct: 410 MEEEGILQVVLVDMYAKCGSMDYAWKVYDQTIKKDRNTALWNSILAGYANKGLKKESFNH 469
Query: 121 LKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGK 180
EM +E T V++V N + L +++ MY+K G
Sbjct: 470 FLEMLESDIEYDVLTMVTIV----------------------NLLVLETALVDMYSKCGA 507
Query: 181 VNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILG 240
+ +AR++FD + +IVSW +I GY G EA L +M + + P+ V FL ++
Sbjct: 508 ITKARTVFDNMNGKNIVSWNAMISGYSKHGCSKEALILYEEMPKKGMYPNEVTFLAILSA 567
Query: 241 CAQVGNLFLALSMHSLLLKSGYNNEDPLDNL--LVSMYTKCGDLELARRVFDAV-LEKSV 297
C+ G + L + + ++ YN E ++ +V + + G LE A+ + + +E V
Sbjct: 568 CSHTGLVEEGLRIFT-SMQEDYNIEAKAEHYTCMVDLLGRAGRLEDAKEFVEKMPIEPEV 626
Query: 298 FLWTSMIGG 306
W +++G
Sbjct: 627 STWGALLGA 635
>gi|356523677|ref|XP_003530462.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Glycine max]
Length = 852
Score = 389 bits (1000), Expect = e-105, Method: Compositional matrix adjust.
Identities = 211/623 (33%), Positives = 342/623 (54%), Gaps = 8/623 (1%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+I N F E L + ML+ G+ + T+ V ++CA +++ G ++H H LK
Sbjct: 210 VIAGYVQNDRFIEGLKLFKDMLKVGMGVSQSTYASVFRSCAGLSAFKLGTQLHGHALKSD 269
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F D+ + T +DMY+KC + KV + +P R S+N+II ++R +A+ +
Sbjct: 270 FAYDSIIGTATLDMYAKCDRMSDAWKVFNTLPNPPRQ--SYNAIIVGYARQDQGLKALEI 327
Query: 121 LKEMWVLGLELSASTFVSVVSGCSF----RQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
+ + L + ++ CS +GI +H K GL N I +AN+++ MY
Sbjct: 328 FQSLQRTYLSFDEISLSGALTACSVIKGHLEGIQLHGLAVKCGLGFN-ICVANTILDMYG 386
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K G + EA +IFD++ VSW II + + + L M R ++ PD + +
Sbjct: 387 KCGALVEACTIFDDMERRDAVSWNAIIAAHEQNEEIVKTLSLFVSMLRSTMEPDDFTYGS 446
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
++ CA L + +H ++KSG + + + LV MY KCG L A ++ D + EK+
Sbjct: 447 VVKACAGQQALNYGMEIHGRIVKSGMGLDWFVGSALVDMYGKCGMLMEAEKIHDRLEEKT 506
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEE 356
W S+I G++ A F ++L+ V P+ T AT L CA + ++ GK+I
Sbjct: 507 TVSWNSIISGFSSQKQSENAQRYFSQMLEMGVIPDNFTYATVLDVCANMATIELGKQIHA 566
Query: 357 YIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQ 416
I+ L S+ + ++L+ M+SKCG + ++ +FE+ P +D WSAMI YA HG G+Q
Sbjct: 567 QILKLNLHSDVYIASTLVDMYSKCGNMQDSRLMFEKTPKRDYVTWSAMICAYAYHGHGEQ 626
Query: 417 ALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCL 476
A+ LF +MQ + +KP+ ++ S+L AC+H G VD GL +F+ MQS++G++P +EHY C+
Sbjct: 627 AIKLFEEMQ-LLNVKPNHTIFISVLRACAHMGYVDKGLHYFQIMQSHYGLDPHMEHYSCM 685
Query: 477 VDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGST 536
VDLLGR+ + + ALK I M E +W LLS C NVE+ E A +LL L+P +
Sbjct: 686 VDLLGRSDQVNEALKLIESMHFEADDVIWRTLLSNCKMQGNVEVAEKAFNSLLQLDPQDS 745
Query: 537 GNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSV 596
Y+L+AN++ + GMW E A R +M + +L KEPG S +E+ V F+ GD++H S
Sbjct: 746 SAYVLLANVYANVGMWGEVAKIRSIMKNCKLKKEPGCSWIEVRDEVHTFLVGDKAHPRSE 805
Query: 597 DIRKTLKELHIKLLEAGYIAEAD 619
+I + L ++ AGY+ + D
Sbjct: 806 EIYEQTHLLVDEMKWAGYVPDID 828
Score = 198 bits (504), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 131/539 (24%), Positives = 260/539 (48%), Gaps = 18/539 (3%)
Query: 7 NNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAF 66
+NG +++ + M + + TF +VLKAC+ I G +VH +++GF+ D
Sbjct: 115 HNGVNRKSIEIFVRMRSLKIPHDYATFSVVLKACSGIEDYGLGLQVHCLAIQMGFENDVV 174
Query: 67 VQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWV 126
+ L+DMYSKC + ++ EMP R++V W+++I+ + + E + + K+M
Sbjct: 175 TGSALVDMYSKCKKLDGAFRIFREMPE--RNLVCWSAVIAGYVQNDRFIEGLKLFKDMLK 232
Query: 127 LGLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVN 182
+G+ +S ST+ SV C +F+ G +H K + I + + + MYAK +++
Sbjct: 233 VGMGVSQSTYASVFRSCAGLSAFKLGTQLHGHALKSDFAYDSI-IGTATLDMYAKCDRMS 291
Query: 183 EARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCA 242
+A +F+ + S+ II GY +A + ++R ++ D + + C+
Sbjct: 292 DAWKVFNTLPNPPRQSYNAIIVGYARQDQGLKALEIFQSLQRTYLSFDEISLSGALTACS 351
Query: 243 QVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTS 302
+ + +H L +K G + N ++ MY KCG L A +FD + + W +
Sbjct: 352 VIKGHLEGIQLHGLAVKCGLGFNICVANTILDMYGKCGALVEACTIFDDMERRDAVSWNA 411
Query: 303 MIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNG 362
+I + Q + ++LF +L++++ P++ T + + ACA +L+ G EI IV +G
Sbjct: 412 IIAAHEQNEEIVKTLSLFVSMLRSTMEPDDFTYGSVVKACAGQQALNYGMEIHGRIVKSG 471
Query: 363 LESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFY 422
+ + V ++L+ M+ KCG + +A+++ +R+ +K W+++I+G++ + A F
Sbjct: 472 MGLDWFVGSALVDMYGKCGMLMEAEKIHDRLEEKTTVSWNSIISGFSSQKQSENAQRYFS 531
Query: 423 KMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGR 482
+M + G+ PD Y ++L C++ ++ G + + + LVD+ +
Sbjct: 532 QMLEM-GVIPDNFTYATVLDVCANMATIELGKQIHAQIL-KLNLHSDVYIASTLVDMYSK 589
Query: 483 AGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAK-----NLLTLNPGST 536
G + + P + W+ ++ A H + GE A K LL + P T
Sbjct: 590 CGNMQDSRLMFEKTP-KRDYVTWSAMICAYAYHGH---GEQAIKLFEEMQLLNVKPNHT 644
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 127/515 (24%), Positives = 242/515 (46%), Gaps = 39/515 (7%)
Query: 31 FTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDE 90
FTF +L+ C+N+ ++ GK+ H+ ++ F +V L+ Y K S+ + KV D
Sbjct: 7 FTFSHILQKCSNLKALNPGKQAHAQMIVTSFVPTIYVANCLVQFYCKSSNMNYAFKVFDR 66
Query: 91 MPVR-----------------------------LRSVVSWNSIISAHSRACLNDEAILVL 121
MP R R VVSWNS++S + +N ++I +
Sbjct: 67 MPHRDVISWNTMIFGYAEIGNMGFAQSLFDTMPERDVVSWNSLLSCYLHNGVNRKSIEIF 126
Query: 122 KEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAK 177
M L + +TF V+ CS + G+ +HC ++G N++ ++++ MY+K
Sbjct: 127 VRMRSLKIPHDYATFSVVLKACSGIEDYGLGLQVHCLAIQMGF-ENDVVTGSALVDMYSK 185
Query: 178 FGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNL 237
K++ A IF E+ E ++V W+ +I GYV E L M ++ + + ++
Sbjct: 186 CKKLDGAFRIFREMPERNLVCWSAVIAGYVQNDRFIEGLKLFKDMLKVGMGVSQSTYASV 245
Query: 238 ILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSV 297
CA + L +H LKS + + + + MY KC + A +VF+ +
Sbjct: 246 FRSCAGLSAFKLGTQLHGHALKSDFAYDSIIGTATLDMYAKCDRMSDAWKVFNTLPNPPR 305
Query: 298 FLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEY 357
+ ++I GYA+ +A+ +F+ L +T + +E +L+ L+AC+ + +G ++
Sbjct: 306 QSYNAIIVGYARQDQGLKALEIFQSLQRTYLSFDEISLSGALTACSVIKGHLEGIQLHGL 365
Query: 358 IVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQA 417
V GL N V +++ M+ KCG + +A +F+ + +D W+A+I + + +
Sbjct: 366 AVKCGLGFNICVANTILDMYGKCGALVEACTIFDDMERRDAVSWNAIIAAHEQNEEIVKT 425
Query: 418 LNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFF-KSMQSNFGIEPSIEHYLCL 476
L+LF M ++PD Y S++ AC+ ++ G+ + ++S G++ + L
Sbjct: 426 LSLFVSMLR-STMEPDDFTYGSVVKACAGQQALNYGMEIHGRIVKSGMGLDWFVGS--AL 482
Query: 477 VDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSA 511
VD+ G+ G + + IH+ E W ++S
Sbjct: 483 VDMYGKCGML-MEAEKIHDRLEEKTTVSWNSIISG 516
>gi|297598430|ref|NP_001045574.2| Os01g0977400 [Oryza sativa Japonica Group]
gi|255674132|dbj|BAF07488.2| Os01g0977400, partial [Oryza sativa Japonica Group]
Length = 687
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 207/619 (33%), Positives = 349/619 (56%), Gaps = 23/619 (3%)
Query: 21 MLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSD 80
ML+ V N++TFP LKAC+ + G+ +H H + G Q D FV T L+DMY KC+
Sbjct: 1 MLRHRVAPNNYTFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCAC 60
Query: 81 FVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAI--LVLKEMWVLGLELSASTFVS 138
+ + MP R +V+WN++++ ++ + A+ L+ +M + L +AST V+
Sbjct: 61 LPDAAHIFATMPAR--DLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVA 118
Query: 139 VV----SGCSFRQGISMHCCVYKLGL---------LNNEIPLANSVMSMYAKFGKVNEAR 185
++ + QG S+H + L L + + L +++ MYAK G + AR
Sbjct: 119 LLPLLAQQGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYAR 178
Query: 186 SIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSV---TPDLVVFLNLILGCA 242
+FD + + V+W+ +IGG+V + +AF L M + +P + + + CA
Sbjct: 179 RVFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIA--SALRACA 236
Query: 243 QVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTS 302
+ +L + +H+LL KSG + + N L+SMY K G ++ A +FD + K +++
Sbjct: 237 SLDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSA 296
Query: 303 MIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNG 362
++ GY Q G EA +FK++ +V P+ AT+ + + AC+ L +L G+ +++ G
Sbjct: 297 LVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRG 356
Query: 363 LESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFY 422
L S + +LI M++KCGRI+ +++VF +P +D+ W+ MI GY IHG+G +A LF
Sbjct: 357 LASETSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFL 416
Query: 423 KMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGR 482
+M ++ G PD V + +LSACSHSG+V +G +F M +G+ P +EHY+C+VDLL R
Sbjct: 417 EMNNL-GFPPDGVTFICLLSACSHSGLVIEGKHWFHVMGHGYGLTPRMEHYICMVDLLSR 475
Query: 483 AGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILM 542
G D A + I MP+ +VW LL AC + N++LG+ ++ + L P TGN++L+
Sbjct: 476 GGFLDEAYEFIQSMPLRADVRVWVALLGACRVYKNIDLGKKVSRMIQELGPEGTGNFVLL 535
Query: 543 ANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTL 602
+N++++AG + EAA R + + K PG S +EI+GS+ FV GD+SH S +I + L
Sbjct: 536 SNIYSAAGRFDEAAEVRIIQKVQGFKKSPGCSWIEINGSLHAFVGGDQSHPQSPEIYREL 595
Query: 603 KELHIKLLEAGYIAEADIV 621
+ + + + GY + V
Sbjct: 596 DNILVGIKKLGYQPDTSFV 614
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 71/144 (49%), Gaps = 2/144 (1%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
++ NG EE + M V ++ T ++ AC+++ ++ G+ H V+ G
Sbjct: 297 LVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRG 356
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+ + LIDMY+KC SR+V + MP R +VSWN++I+ + L EA +
Sbjct: 357 LASETSICNALIDMYAKCGRIDLSRQVFNMMPS--RDIVSWNTMIAGYGIHGLGKEATAL 414
Query: 121 LKEMWVLGLELSASTFVSVVSGCS 144
EM LG TF+ ++S CS
Sbjct: 415 FLEMNNLGFPPDGVTFICLLSACS 438
>gi|147767942|emb|CAN73397.1| hypothetical protein VITISV_016435 [Vitis vinifera]
Length = 929
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 224/696 (32%), Positives = 366/696 (52%), Gaps = 113/696 (16%)
Query: 9 GSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQ----- 63
G +EET+ + M+ GV + F FP V KAC+ + + GK V+ ++L +GF+
Sbjct: 169 GDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKDVYDYMLSIGFEGNSCVK 228
Query: 64 ----DAFVQTGLIDM----------------------YSKCSDFVSSRKVLDEMPVRLRS 97
D F++ G +D+ Y+ +F + K + +M +L
Sbjct: 229 GSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGEFKKALKCISDM--KLSG 286
Query: 98 V----VSWNSIISAHSRAC--------------LND----------------------EA 117
V V+WN+IIS ++++ L D EA
Sbjct: 287 VKPDQVTWNAIISGYAQSGQFEEASKYFLEMGGLKDFKPNVVSWTALIAGSEQNGYDFEA 346
Query: 118 ILVLKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMS 173
+ V ++M + G++ ++ T S VS C+ R G +H K+ L++++ + NS++
Sbjct: 347 LSVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVGNSLVD 406
Query: 174 MYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVV 233
YAK V AR F I +T +VSW ++ GY G+ EA L ++M+ + PD++
Sbjct: 407 YYAKCRSVEVARRKFGMIKQTDLVSWNAMLAGYALRGSHEEAIELLSEMKFQGIEPDIIT 466
Query: 234 FLNLILG-----------------------------------CAQVGNLFLALSMHSLLL 258
+ L+ G C QV NL L +H +L
Sbjct: 467 WNGLVTGFTQYGDGKAALEFFQRMHSMGMDPNTTTISGALAACGQVRNLKLGKEIHGYVL 526
Query: 259 KSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVN 318
++ + + L+SMY+ C LE+A VF + + V +W S+I AQ G A++
Sbjct: 527 RNHIELSTGVGSALISMYSGCDSLEVACSVFSELSTRDVVVWNSIISACAQSGRSVNALD 586
Query: 319 LFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFS 378
L + + ++V N T+ + L AC++L +L +GKEI ++I+ GL++ + SLI M+
Sbjct: 587 LLREMNLSNVEVNTVTMVSALPACSKLAALRQGKEIHQFIIRCGLDTCNFILNSLIDMYG 646
Query: 379 KCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYT 438
+CG I K++ +F+ +P +DL W+ MI+ Y +HG G A+NLF + + GLKP+ + +T
Sbjct: 647 RCGSIQKSRRIFDLMPQRDLVSWNVMISVYGMHGFGMDAVNLFQXFRTM-GLKPNHITFT 705
Query: 439 SILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPV 498
++LSACSHSG++++G +FK M++ + ++P++E Y C+VDLL RAG+F+ L+ I +MP
Sbjct: 706 NLLSACSHSGLIEEGWKYFKMMKTEYAMDPAVEQYACMVDLLSRAGQFNETLEFIEKMPF 765
Query: 499 EVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATA 558
E A VW LL AC H N +L EYAA+ L L P S+GNY+LMAN++++AG W++AA
Sbjct: 766 EPNAAVWGSLLGACRIHCNPDLAEYAARYLFELEPQSSGNYVLMANIYSAAGRWEDAAKI 825
Query: 559 RGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHL 594
R LM +R +TK PG S +E+ + FV GD SH L
Sbjct: 826 RCLMKERGVTKPPGCSWIEVKRKLHSFVVGDTSHPL 861
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 113/444 (25%), Positives = 211/444 (47%), Gaps = 50/444 (11%)
Query: 36 VLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRL 95
+L+ C + ++ G +VH+ ++ G F+ + L+++Y + +R++ D+M
Sbjct: 95 ILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDKMSE-- 152
Query: 96 RSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCS----FRQGISM 151
R+V SW +I+ + +E I + M G+ F V CS +R G +
Sbjct: 153 RNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKDV 212
Query: 152 HCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGN 211
+ + +G N + S++ M+ K G+++ AR F+EI + W ++ GY + G
Sbjct: 213 YDYMLSIGFEGNSC-VKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGE 271
Query: 212 VNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNL 271
+A + M+ V PD V + N
Sbjct: 272 FKKALKCISDMKLSGVKPDQVTW-----------------------------------NA 296
Query: 272 LVSMYTKCGDLELARRVFDAV-----LEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKT 326
++S Y + G E A + F + + +V WT++I G Q GY EA+++F++++
Sbjct: 297 IISGYAQSGQFEEASKYFLEMGGLKDFKPNVVSWTALIAGSEQNGYDFEALSVFRKMVLE 356
Query: 327 SVRPNEATLATTLSACAELGSLSKGKEIEEY-IVLNGLESNRQVQTSLIHMFSKCGRINK 385
V+PN T+A+ +SAC L L G+EI Y I + L+S+ V SL+ ++KC +
Sbjct: 357 GVKPNSITIASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVGNSLVDYYAKCRSVEV 416
Query: 386 AKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACS 445
A+ F + DL W+AM+ GYA+ G ++A+ L +M+ +G++PD + + +++ +
Sbjct: 417 ARRKFGMIKQTDLVSWNAMLAGYALRGSHEEAIELLSEMK-FQGIEPDIITWNGLVTGFT 475
Query: 446 HSGMVDDGLSFFKSMQSNFGIEPS 469
G L FF+ M S G++P+
Sbjct: 476 QYGDGKAALEFFQRMHS-MGMDPN 498
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 125/488 (25%), Positives = 226/488 (46%), Gaps = 50/488 (10%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKV- 59
+I S NG E LS + M+ GV NS T + AC N++ + G+ +H + +KV
Sbjct: 333 LIAGSEQNGYDFEALSVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIHGYCIKVE 392
Query: 60 GFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAIL 119
D V L+D Y+KC +R+ ++ +VSWN++++ ++ ++EAI
Sbjct: 393 ELDSDLLVGNSLVDYYAKCRSVEVARRKFGM--IKQTDLVSWNAMLAGYALRGSHEEAIE 450
Query: 120 VLKEMWVLGLELSASTFVSVVSGCS-----------FRQGISM----------------- 151
+L EM G+E T+ +V+G + F++ SM
Sbjct: 451 LLSEMKFQGIEPDIITWNGLVTGFTQYGDGKAALEFFQRMHSMGMDPNTTTISGALAACG 510
Query: 152 HCCVYKLG------LLNNEIPLANSV----MSMYAKFGKVNEARSIFDEIGETSIVSWTT 201
KLG +L N I L+ V +SMY+ + A S+F E+ +V W +
Sbjct: 511 QVRNLKLGKEIHGYVLRNHIELSTGVGSALISMYSGCDSLEVACSVFSELSTRDVVVWNS 570
Query: 202 IIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSG 261
II G A L +M +V + V ++ + C+++ L +H +++ G
Sbjct: 571 IISACAQSGRSVNALDLLREMNLSNVEVNTVTMVSALPACSKLAALRQGKEIHQFIIRCG 630
Query: 262 YNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFK 321
+ + + N L+ MY +CG ++ +RR+FD + ++ + W MI Y G+ +AVNLF+
Sbjct: 631 LDTCNFILNSLIDMYGRCGSIQKSRRIFDLMPQRDLVSWNVMISVYGMHGFGMDAVNLFQ 690
Query: 322 RLLKTSVRPNEATLATTLSACAELGSLSKG-KEIEEYIVLNGLESNRQVQTSLIHMFSKC 380
++PN T LSAC+ G + +G K + ++ + ++ + S+
Sbjct: 691 XFRTMGLKPNHITFTNLLSACSHSGLIEEGWKYFKMMKTEYAMDPAVEQYACMVDLLSRA 750
Query: 381 GRINKAKEVFERVP-DKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDA----V 435
G+ N+ E E++P + + AVW +++ IH D A Y +++ L+P + V
Sbjct: 751 GQFNETLEFIEKMPFEPNAAVWGSLLGACRIHCNPDLAE---YAARYLFELEPQSSGNYV 807
Query: 436 VYTSILSA 443
+ +I SA
Sbjct: 808 LMANIYSA 815
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 96/331 (29%), Positives = 172/331 (51%), Gaps = 9/331 (2%)
Query: 204 GGYVNV-GNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGY 262
GG V+ G +N A L + M + + ++ +++ C ++ NL L +H+ L+ +G
Sbjct: 61 GGSVHRNGVLNNAAMLLSSMDLTNPDECIEIYASILQKCRKLYNLRLGFQVHAQLVVNGV 120
Query: 263 NNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKR 322
+ + L + L+ +Y + G +E ARR+FD + E++VF WT+++ Y LG E + LF
Sbjct: 121 DVCEFLGSRLLEVYCQTGCVEDARRMFDKMSERNVFSWTAIMEMYCGLGDYEETIKLFYL 180
Query: 323 LLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGR 382
++ VRP+ AC+EL + GK++ +Y++ G E N V+ S++ MF KCGR
Sbjct: 181 MVNEGVRPDHFVFPKVFKACSELKNYRVGKDVYDYMLSIGFEGNSCVKGSILDMFIKCGR 240
Query: 383 INKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILS 442
++ A+ FE + KD+ +W+ M++GY G +AL M+ + G+KPD V + +I+S
Sbjct: 241 MDIARRFFEEIEFKDVFMWNIMVSGYTSKGEFKKALKCISDMK-LSGVKPDQVTWNAIIS 299
Query: 443 ACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVE--- 499
+ SG ++ +F M +P++ + L+ + G AL +M +E
Sbjct: 300 GYAQSGQFEEASKYFLEMGGLKDFKPNVVSWTALIAGSEQNGYDFEALSVFRKMVLEGVK 359
Query: 500 VQAQVWAPLLSAC----MKHHNVELGEYAAK 526
+ A +SAC + H E+ Y K
Sbjct: 360 PNSITIASAVSACTNLSLLRHGREIHGYCIK 390
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 86/352 (24%), Positives = 165/352 (46%), Gaps = 37/352 (10%)
Query: 106 SAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLL 161
S H LN+ A+L L M + + + S++ C + R G +H + G+
Sbjct: 63 SVHRNGVLNNAAML-LSSMDLTNPDECIEIYASILQKCRKLYNLRLGFQVHAQLVVNGVD 121
Query: 162 NNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQ 221
E L + ++ +Y + G V +AR +FD++ E ++ SWT I+ Y +G+ E L
Sbjct: 122 VCEF-LGSRLLEVYCQTGCVEDARRMFDKMSERNVFSWTAIMEMYCGLGDYEETIKLFYL 180
Query: 222 MRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGD 281
M V PD VF + C+++ N + ++ +L G+ + ++ M+ KCG
Sbjct: 181 MVNEGVRPDHFVFPKVFKACSELKNYRVGKDVYDYMLSIGFEGNSCVKGSILDMFIKCGR 240
Query: 282 LELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSA 341
+++ARR F+ + K VF+W M+ GY G +A+ + + V+P++ T +S
Sbjct: 241 MDIARRFFEEIEFKDVFMWNIMVSGYTSKGEFKKALKCISDMKLSGVKPDQVTWNAIISG 300
Query: 342 CAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVW 401
A+ G + + ++ + GL+ + ++ W
Sbjct: 301 YAQSGQFEEASKY--FLEMGGLKDFK----------------------------PNVVSW 330
Query: 402 SAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDG 453
+A+I G +G +AL++F KM +EG+KP+++ S +SAC++ ++ G
Sbjct: 331 TALIAGSEQNGYDFEALSVFRKMV-LEGVKPNSITIASAVSACTNLSLLRHG 381
>gi|57899529|dbj|BAD87043.1| vegetative storage protein-like [Oryza sativa Japonica Group]
Length = 698
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 207/619 (33%), Positives = 349/619 (56%), Gaps = 23/619 (3%)
Query: 21 MLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSD 80
ML+ V N++TFP LKAC+ + G+ +H H + G Q D FV T L+DMY KC+
Sbjct: 1 MLRHRVAPNNYTFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCAC 60
Query: 81 FVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAI--LVLKEMWVLGLELSASTFVS 138
+ + MP R +V+WN++++ ++ + A+ L+ +M + L +AST V+
Sbjct: 61 LPDAAHIFATMPAR--DLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVA 118
Query: 139 VV----SGCSFRQGISMHCCVYKLGL---------LNNEIPLANSVMSMYAKFGKVNEAR 185
++ + QG S+H + L L + + L +++ MYAK G + AR
Sbjct: 119 LLPLLAQQGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYAR 178
Query: 186 SIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSV---TPDLVVFLNLILGCA 242
+FD + + V+W+ +IGG+V + +AF L M + +P + + + CA
Sbjct: 179 RVFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIA--SALRACA 236
Query: 243 QVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTS 302
+ +L + +H+LL KSG + + N L+SMY K G ++ A +FD + K +++
Sbjct: 237 SLDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSA 296
Query: 303 MIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNG 362
++ GY Q G EA +FK++ +V P+ AT+ + + AC+ L +L G+ +++ G
Sbjct: 297 LVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRG 356
Query: 363 LESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFY 422
L S + +LI M++KCGRI+ +++VF +P +D+ W+ MI GY IHG+G +A LF
Sbjct: 357 LASETSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFL 416
Query: 423 KMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGR 482
+M ++ G PD V + +LSACSHSG+V +G +F M +G+ P +EHY+C+VDLL R
Sbjct: 417 EMNNL-GFPPDGVTFICLLSACSHSGLVIEGKHWFHVMGHGYGLTPRMEHYICMVDLLSR 475
Query: 483 AGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILM 542
G D A + I MP+ +VW LL AC + N++LG+ ++ + L P TGN++L+
Sbjct: 476 GGFLDEAYEFIQSMPLRADVRVWVALLGACRVYKNIDLGKKVSRMIQELGPEGTGNFVLL 535
Query: 543 ANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTL 602
+N++++AG + EAA R + + K PG S +EI+GS+ FV GD+SH S +I + L
Sbjct: 536 SNIYSAAGRFDEAAEVRIIQKVQGFKKSPGCSWIEINGSLHAFVGGDQSHPQSPEIYREL 595
Query: 603 KELHIKLLEAGYIAEADIV 621
+ + + + GY + V
Sbjct: 596 DNILVGIKKLGYQPDTSFV 614
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 71/144 (49%), Gaps = 2/144 (1%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
++ NG EE + M V ++ T ++ AC+++ ++ G+ H V+ G
Sbjct: 297 LVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRG 356
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+ + LIDMY+KC SR+V + MP R +VSWN++I+ + L EA +
Sbjct: 357 LASETSICNALIDMYAKCGRIDLSRQVFNMMPS--RDIVSWNTMIAGYGIHGLGKEATAL 414
Query: 121 LKEMWVLGLELSASTFVSVVSGCS 144
EM LG TF+ ++S CS
Sbjct: 415 FLEMNNLGFPPDGVTFICLLSACS 438
>gi|147772562|emb|CAN67343.1| hypothetical protein VITISV_038220 [Vitis vinifera]
Length = 732
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 216/622 (34%), Positives = 360/622 (57%), Gaps = 9/622 (1%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+I T G +L ++ M +T V + + VL AC+ + + GK++H++VL+ G
Sbjct: 109 IIAGYTKCGRSXVSLELFAQMRETNVVPDRYVVSSVLSACSMLEFLEGGKQIHAYVLRRG 168
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+ D V LID Y+KC+ + RK+ D+M V+ +++SW ++IS + + + EA+ +
Sbjct: 169 TEMDVSVVNVLIDFYTKCNRVKAGRKLFDQMVVK--NIISWTTMISGYMQNSFDWEAMKL 226
Query: 121 LKEMWVLGLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
EM LG + SV++ C + QG +H K L +NE + N ++ MYA
Sbjct: 227 FGEMNRLGWKPDGFACTSVLTSCGSLEALEQGRQVHAYTIKANLESNEF-VKNGLIDMYA 285
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K + +A+ +FD + E +++S+ +I GY + ++EA L ++MR P L+ F++
Sbjct: 286 KSNLLXDAKKVFDVMAEQNVISYNAMIEGYSSQEKLSEALELFHEMRVRLFPPSLLTFVS 345
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
L+ A + L L+ +H L++K G + + + L+ +Y+KC ++ AR VF+ + EK
Sbjct: 346 LLGVSASLFALELSKQIHGLIIKXGVSLDLFAGSALIDVYSKCSYVKDARHVFEEMNEKD 405
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEE 356
+ +W +M GY Q EA+ L+ L + +PNE T A ++A + L SL G++
Sbjct: 406 IVVWNAMFFGYTQHLENEEALKLYSTLQFSRQKPNEFTFAALITAASNLASLRHGQQFHN 465
Query: 357 YIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQ 416
+V GL+ V +L+ M++KCG I +A+++F +D+ W++MI+ +A HG ++
Sbjct: 466 QLVKMGLDFCPFVTNALVDMYAKCGSIEEARKMFNSSIWRDVVCWNSMISTHAQHGEAEE 525
Query: 417 ALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCL 476
AL +F +M EG++P+ V + ++LSACSH+G V+DGL+ F SM FGI+P EHY C+
Sbjct: 526 ALGMFREMMK-EGIQPNYVTFVAVLSACSHAGXVEDGLNHFNSM-PGFGIKPGTEHYACV 583
Query: 477 VDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGST 536
V LLGR+G+ A + I +MP+E A VW LLSAC NVELG+YAA+ ++ +P +
Sbjct: 584 VSLLGRSGKLFEAKEFIEKMPIEPAAIVWRSLLSACRIAGNVELGKYAAEMAISTDPKDS 643
Query: 537 GNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSV 596
G+YIL++N+F S GMW + R MD + KEPG S +E++ V VF+A +H +
Sbjct: 644 GSYILLSNIFASKGMWADVKKVRDRMDSSEVVKEPGRSWIEVNNKVNVFIARXTTHREAD 703
Query: 597 DIRKTLKELHIKLLEAGYIAEA 618
I L L + AGY+ +A
Sbjct: 704 MIGSVLDILIQHIKGAGYVPDA 725
Score = 213 bits (542), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 139/523 (26%), Positives = 255/523 (48%), Gaps = 13/523 (2%)
Query: 3 RNSTNNGSFEETLSTYSSM-LQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGF 61
++ + G EE L + + ++G H N F V++AC + + G ++H V++ GF
Sbjct: 9 KDMEDEGYSEEALMVFVDLQRKSGEHPNEFVLASVIRACTQLGVVEKGAQLHGFVVRSGF 68
Query: 62 QQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVL 121
QD +V T LID YSK B +R V D++ ++ V+W +II+ +++ + ++ +
Sbjct: 69 DQDVYVGTSLIDFYSKNGBIEVARLVFDQLLE--KTAVTWTTIIAGYTKCGRSXVSLELF 126
Query: 122 KEMWVLGLELSASTFVSVVSGCSFRQ----GISMHCCVYKLGLLNNEIPLANSVMSMYAK 177
+M + SV+S CS + G +H V + G ++ + N ++ Y K
Sbjct: 127 AQMRETNVVPDRYVVSSVLSACSMLEFLEGGKQIHAYVLRRG-TEMDVSVVNVLIDFYTK 185
Query: 178 FGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNL 237
+V R +FD++ +I+SWTT+I GY+ EA L +M R+ PD ++
Sbjct: 186 CNRVKAGRKLFDQMVVKNIISWTTMISGYMQNSFDWEAMKLFGEMNRLGWKPDGFACTSV 245
Query: 238 ILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSV 297
+ C + L +H+ +K+ + + + N L+ MY K L A++VFD + E++V
Sbjct: 246 LTSCGSLEALEQGRQVHAYTIKANLESNEFVKNGLIDMYAKSNLLXDAKKVFDVMAEQNV 305
Query: 298 FLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEY 357
+ +MI GY+ SEA+ LF + P+ T + L A L +L K+I
Sbjct: 306 ISYNAMIEGYSSQEKLSEALELFHEMRVRLFPPSLLTFVSLLGVSASLFALELSKQIHGL 365
Query: 358 IVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQA 417
I+ G+ + ++LI ++SKC + A+ VFE + +KD+ VW+AM GY H ++A
Sbjct: 366 IIKXGVSLDLFAGSALIDVYSKCSYVKDARHVFEEMNEKDIVVWNAMFFGYTQHLENEEA 425
Query: 418 LNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSM-QSNFGIEPSIEHYLCL 476
L L+ +Q KP+ + ++++A S+ + G F + + P + + L
Sbjct: 426 LKLYSTLQFSRQ-KPNEFTFAALITAASNLASLRHGQQFHNQLVKMGLDFCPFVTN--AL 482
Query: 477 VDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVE 519
VD+ + G + A K + + W ++S +H E
Sbjct: 483 VDMYAKCGSIEEARKMFNS-SIWRDVVCWNSMISTHAQHGEAE 524
>gi|357131877|ref|XP_003567560.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Brachypodium distachyon]
Length = 808
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 203/603 (33%), Positives = 346/603 (57%), Gaps = 16/603 (2%)
Query: 29 NSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVL 88
N++TFP VLKAC+ + + + VH H + G D FV T L+D+Y+KC+ F + V
Sbjct: 128 NNYTFPFVLKACSALLDLRSARAVHCHAARAGLHADLFVSTALVDVYAKCASFRHAATVF 187
Query: 89 DEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVV----SGCS 144
MP R VV+WN++++ ++ + I L M +AST V+++ +
Sbjct: 188 RRMPAR--DVVAWNAMLAGYALHGKYSDTIACLLLMQD-DHAPNASTLVALLPLLAQHGA 244
Query: 145 FRQGISMHCCVYKLGLLNNE---IPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTT 201
QG ++H + L++ + + +++ MYAK G + A +F+ + + V+W+
Sbjct: 245 LSQGRAVHAYSVRACSLHDHKDGVLVGTALLDMYAKCGHLVYASRVFEAMAVRNEVTWSA 304
Query: 202 IIGGYVNVGNVNEAFGLCNQMRRMSV---TPDLVVFLNLILGCAQVGNLFLALSMHSLLL 258
++GG+V G + EAF L M + +P V + + CA + +L L +H+LL
Sbjct: 305 LVGGFVLCGRMLEAFSLFKDMLAQGLCFLSPTSVA--SALRACANLSDLCLGKQLHALLA 362
Query: 259 KSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVN 318
KSG + + N L+SMY K G ++ A +FD ++ K +++++ GY Q G EA
Sbjct: 363 KSGLHTDLTAGNSLLSMYAKAGLIDQATTLFDQMVVKDTVSYSALVSGYVQNGKADEAFR 422
Query: 319 LFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFS 378
+F+++ +V+P+ AT+ + + AC+ L +L GK +++ G+ S + +LI M++
Sbjct: 423 VFRKMQACNVQPDVATMVSLIPACSHLAALQHGKCGHGSVIVRGIASETSICNALIDMYA 482
Query: 379 KCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYT 438
KCGRI+ ++++F+ +P +D+ W+ MI GY IHG+G +A LF M+H + +PD V +
Sbjct: 483 KCGRIDLSRQIFDVMPARDIVSWNTMIAGYGIHGLGKEATALFLDMKH-QACEPDDVTFI 541
Query: 439 SILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPV 498
++SACSHSG+V +G +F M +GI P +EHY+ +VDLL R G D A + I MP+
Sbjct: 542 CLISACSHSGLVTEGKRWFHMMAHKYGITPRMEHYIGMVDLLARGGFLDEAYQFIQGMPL 601
Query: 499 EVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATA 558
+ +VW LL AC H N++LG+ + + L P TGN++L++N+F++AG + EAA
Sbjct: 602 KADVRVWGALLGACRVHKNIDLGKQVSSMIQQLGPEGTGNFVLLSNIFSAAGRFDEAAEV 661
Query: 559 RGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKELHIKLLEAGYIAEA 618
R + ++ K PG S +EI+GS+ F+ GDRSH S +I + L + + + + GY A+
Sbjct: 662 RIIQKEQGFKKSPGCSWIEINGSLHAFIGGDRSHAQSSEIYQELDNILVDINKLGYRADT 721
Query: 619 DIV 621
V
Sbjct: 722 SFV 724
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 86/327 (26%), Positives = 152/327 (46%), Gaps = 10/327 (3%)
Query: 179 GKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLI 238
G ++ AR +FD+I I + +I Y G + RR P+ F ++
Sbjct: 77 GDLSLARHLFDQIPAPGIHDYNALIRAYSLRGPALALRLYRSLRRRRLPQPNNYTFPFVL 136
Query: 239 LGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVF 298
C+ + +L A ++H ++G + + + LV +Y KC A VF + + V
Sbjct: 137 KACSALLDLRSARAVHCHAARAGLHADLFVSTALVDVYAKCASFRHAATVFRRMPARDVV 196
Query: 299 LWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYI 358
W +M+ GYA G S+ + L++ PN +TL L A+ G+LS+G+ + Y
Sbjct: 197 AWNAMLAGYALHGKYSDTIACL-LLMQDDHAPNASTLVALLPLLAQHGALSQGRAVHAYS 255
Query: 359 V----LNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMG 414
V L+ + V T+L+ M++KCG + A VFE + ++ WSA++ G+ + G
Sbjct: 256 VRACSLHDHKDGVLVGTALLDMYAKCGHLVYASRVFEAMAVRNEVTWSALVGGFVLCGRM 315
Query: 415 DQALNLFYKM--QHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEH 472
+A +LF M Q + L P +V S L AC++ + G ++ + G+ +
Sbjct: 316 LEAFSLFKDMLAQGLCFLSPTSV--ASALRACANLSDLCLGKQ-LHALLAKSGLHTDLTA 372
Query: 473 YLCLVDLLGRAGRFDLALKTIHEMPVE 499
L+ + +AG D A +M V+
Sbjct: 373 GNSLLSMYAKAGLIDQATTLFDQMVVK 399
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 81/175 (46%), Gaps = 2/175 (1%)
Query: 279 CGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATT 338
CGDL LAR +FD + + + ++I Y+ G + +PN T
Sbjct: 76 CGDLSLARHLFDQIPAPGIHDYNALIRAYSLRGPALALRLYRSLRRRRLPQPNNYTFPFV 135
Query: 339 LSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDL 398
L AC+ L L + + + GL ++ V T+L+ +++KC A VF R+P +D+
Sbjct: 136 LKACSALLDLRSARAVHCHAARAGLHADLFVSTALVDVYAKCASFRHAATVFRRMPARDV 195
Query: 399 AVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDG 453
W+AM+ GYA+HG + MQ + P+A ++L + G + G
Sbjct: 196 VAWNAMLAGYALHGKYSDTIACLLLMQ--DDHAPNASTLVALLPLLAQHGALSQG 248
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 69/144 (47%), Gaps = 2/144 (1%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
++ NG +E + M V + T ++ AC+++ ++ GK H V+ G
Sbjct: 407 LVSGYVQNGKADEAFRVFRKMQACNVQPDVATMVSLIPACSHLAALQHGKCGHGSVIVRG 466
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+ + LIDMY+KC SR++ D MP R +VSWN++I+ + L EA +
Sbjct: 467 IASETSICNALIDMYAKCGRIDLSRQIFDVMPA--RDIVSWNTMIAGYGIHGLGKEATAL 524
Query: 121 LKEMWVLGLELSASTFVSVVSGCS 144
+M E TF+ ++S CS
Sbjct: 525 FLDMKHQACEPDDVTFICLISACS 548
>gi|186512044|ref|NP_001119013.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635616|sp|P0C8Q2.1|PP323_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g19191, mitochondrial; Flags: Precursor
gi|332658758|gb|AEE84158.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 654
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 204/598 (34%), Positives = 335/598 (56%), Gaps = 11/598 (1%)
Query: 2 IRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGF 61
IR + N E+L + M + G N+FTFP V KACA + + + VH+H++K F
Sbjct: 24 IREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARLADVGCCEMVHAHLIKSPF 83
Query: 62 QQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVL 121
D FV T +DM+ KC+ + KV + MP R +WN+++S ++ D+A +
Sbjct: 84 WSDVFVGTATVDMFVKCNSVDYAAKVFERMPER--DATTWNAMLSGFCQSGHTDKAFSLF 141
Query: 122 KEMWVLGLELSASTFVSVVSGCSFRQGI----SMHCCVYKLGLLNNEIPLANSVMSMYAK 177
+EM + + + T ++++ SF + + +MH +LG+ + ++ +AN+ +S Y K
Sbjct: 142 REMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGV-DVQVTVANTWISTYGK 200
Query: 178 FGKVNEARSIFDEI--GETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFL 235
G ++ A+ +F+ I G+ ++VSW ++ Y G +AFGL M R PDL F+
Sbjct: 201 CGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPDLSTFI 260
Query: 236 NLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEK 295
NL C L +HS + G + + N +SMY+K D AR +FD + +
Sbjct: 261 NLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSARLLFDIMTSR 320
Query: 296 SVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIE 355
+ WT MI GYA+ G EA+ LF ++K+ +P+ TL + +S C + GSL GK I+
Sbjct: 321 TCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETGKWID 380
Query: 356 EYIVLNGLE-SNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMG 414
+ G + N + +LI M+SKCG I++A+++F+ P+K + W+ MI GYA++G+
Sbjct: 381 ARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTPEKTVVTWTTMIAGYALNGIF 440
Query: 415 DQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYL 474
+AL LF KM ++ KP+ + + ++L AC+HSG ++ G +F M+ + I P ++HY
Sbjct: 441 LEALKLFSKMIDLD-YKPNHITFLAVLQACAHSGSLEKGWEYFHIMKQVYNISPGLDHYS 499
Query: 475 CLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPG 534
C+VDLLGR G+ + AL+ I M + A +W LL+AC H NV++ E AA++L L P
Sbjct: 500 CMVDLLGRKGKLEEALELIRNMSAKPDAGIWGALLNACKIHRNVKIAEQAAESLFNLEPQ 559
Query: 535 STGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSH 592
Y+ MAN++ +AGMW A R +M R + K PG S ++++G F G+ H
Sbjct: 560 MAAPYVEMANIYAAAGMWDGFARIRSIMKQRNIKKYPGESVIQVNGKNHSFTVGEHGH 617
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 138/486 (28%), Positives = 235/486 (48%), Gaps = 35/486 (7%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
M+ +G ++ S + M + +S T ++++ + S+ + +H+ +++G
Sbjct: 124 MLSGFCQSGHTDKAFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLG 183
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAI-- 118
V I Y KC D S++ V + + R+VVSWNS+ A+S +A
Sbjct: 184 VDVQVTVANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGL 243
Query: 119 --LVLKEMWVLGLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVM 172
L+L+E + L STF+++ + C + QG +H LG + +I N+ +
Sbjct: 244 YCLMLREEFKPDL----STFINLAASCQNPETLTQGRLIHSHAIHLG-TDQDIEAINTFI 298
Query: 173 SMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLV 232
SMY+K AR +FD + + VSWT +I GY G+++EA L + M + PDLV
Sbjct: 299 SMYSKSEDTCSARLLFDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLV 358
Query: 233 VFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLD-NLLVSMYTKCGDLELARRVFDA 291
L+LI GC + G+L + + G ++ + N L+ MY+KCG + AR +FD
Sbjct: 359 TLLSLISGCGKFGSLETGKWIDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDN 418
Query: 292 VLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKG 351
EK+V WT+MI GYA G EA+ LF +++ +PN T L ACA GSL KG
Sbjct: 419 TPEKTVVTWTTMIAGYALNGIFLEALKLFSKMIDLDYKPNHITFLAVLQACAHSGSLEKG 478
Query: 352 KEI-----EEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDK-DLAVWSAMI 405
E + Y + GL+ + ++ + + G++ +A E+ + K D +W A++
Sbjct: 479 WEYFHIMKQVYNISPGLDH----YSCMVDLLGRKGKLEEALELIRNMSAKPDAGIWGALL 534
Query: 406 NGYAIH---GMGDQALNLFYKMQHVEGLKPD-AVVYTSILSACSHSGMVDDGLSFFKSMQ 461
N IH + +QA + L+P A Y + + + +GM DG + +S+
Sbjct: 535 NACKIHRNVKIAEQAAESLF------NLEPQMAAPYVEMANIYAAAGMW-DGFARIRSIM 587
Query: 462 SNFGIE 467
I+
Sbjct: 588 KQRNIK 593
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 69/289 (23%), Positives = 138/289 (47%), Gaps = 4/289 (1%)
Query: 185 RSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQV 244
R ++ G +S+ +W I VN + E+ L +M+R P+ F + CA++
Sbjct: 6 RRLYRISGLSSVNAWNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARL 65
Query: 245 GNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMI 304
++ +H+ L+KS + ++ + V M+ KC ++ A +VF+ + E+ W +M+
Sbjct: 66 ADVGCCEMVHAHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAML 125
Query: 305 GGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLE 364
G+ Q G+ +A +LF+ + + P+ T+ T + + + SL + + + G++
Sbjct: 126 SGFCQSGHTDKAFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVD 185
Query: 365 SNRQVQTSLIHMFSKCGRINKAKEVFERVP--DKDLAVWSAMINGYAIHGMGDQALNLFY 422
V + I + KCG ++ AK VFE + D+ + W++M Y++ G A L+
Sbjct: 186 VQVTVANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYC 245
Query: 423 KMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIE 471
M E KPD + ++ ++C + + G S + G + IE
Sbjct: 246 LMLR-EEFKPDLSTFINLAASCQNPETLTQG-RLIHSHAIHLGTDQDIE 292
>gi|356567156|ref|XP_003551787.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Glycine max]
Length = 852
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 210/625 (33%), Positives = 342/625 (54%), Gaps = 8/625 (1%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+I N F E L + ML+ G+ + T+ V ++CA +++ G ++H H LK
Sbjct: 210 VIAGYVQNDRFIEGLKLFKDMLKVGMGVSQSTYASVFRSCAGLSAFKLGTQLHGHALKSD 269
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F D+ + T +DMY+KC + KV + +P R S+N+II ++R +A+ +
Sbjct: 270 FAYDSIIGTATLDMYAKCERMFDAWKVFNTLPNPPRQ--SYNAIIVGYARQDQGLKALDI 327
Query: 121 LKEMWVLGLELSASTFVSVVSGCSF----RQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
+ + L + ++ CS +GI +H K GL N I +AN+++ MY
Sbjct: 328 FQSLQRNNLGFDEISLSGALTACSVIKRHLEGIQLHGLAVKCGLGFN-ICVANTILDMYG 386
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K G + EA IF+E+ VSW II + + + L M R ++ PD + +
Sbjct: 387 KCGALMEACLIFEEMERRDAVSWNAIIAAHEQNEEIVKTLSLFVSMLRSTMEPDDFTYGS 446
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
++ CA L +H ++KSG + + + LV MY KCG L A ++ + EK+
Sbjct: 447 VVKACAGQQALNYGTEIHGRIIKSGMGLDWFVGSALVDMYGKCGMLMEAEKIHARLEEKT 506
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEE 356
W S+I G++ A F ++L+ + P+ T AT L CA + ++ GK+I
Sbjct: 507 TVSWNSIISGFSSQKQSENAQRYFSQMLEMGIIPDNYTYATVLDVCANMATIELGKQIHA 566
Query: 357 YIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQ 416
I+ L S+ + ++L+ M+SKCG + ++ +FE+ P +D WSAMI YA HG+G++
Sbjct: 567 QILKLQLHSDVYIASTLVDMYSKCGNMQDSRLMFEKAPKRDYVTWSAMICAYAYHGLGEK 626
Query: 417 ALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCL 476
A+NLF +MQ + +KP+ ++ S+L AC+H G VD GL +F+ M S++G++P +EHY C+
Sbjct: 627 AINLFEEMQLL-NVKPNHTIFISVLRACAHMGYVDKGLHYFQKMLSHYGLDPQMEHYSCM 685
Query: 477 VDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGST 536
VDLLGR+G+ + ALK I MP E +W LLS C NVE+ E A +LL L+P +
Sbjct: 686 VDLLGRSGQVNEALKLIESMPFEADDVIWRTLLSNCKMQGNVEVAEKAFNSLLQLDPQDS 745
Query: 537 GNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSV 596
Y+L+AN++ GMW E A R +M + +L KEPG S +E+ V F+ GD++H S
Sbjct: 746 SAYVLLANVYAIVGMWGEVAKMRSIMKNCKLKKEPGCSWIEVRDEVHTFLVGDKAHPRSE 805
Query: 597 DIRKTLKELHIKLLEAGYIAEADIV 621
+I + L ++ AGY+ + D +
Sbjct: 806 EIYEQTHLLVDEMKWAGYVPDIDFM 830
Score = 192 bits (488), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 129/539 (23%), Positives = 257/539 (47%), Gaps = 18/539 (3%)
Query: 7 NNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAF 66
+NG +++ + M + + TF ++LKAC+ I G +VH +++GF+ D
Sbjct: 115 HNGVNRKSIEIFVRMRSLKIPHDYATFAVILKACSGIEDYGLGLQVHCLAIQMGFENDVV 174
Query: 67 VQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWV 126
+ L+DMYSKC + +V EMP R++V W+++I+ + + E + + K+M
Sbjct: 175 TGSALVDMYSKCKKLDDAFRVFREMPE--RNLVCWSAVIAGYVQNDRFIEGLKLFKDMLK 232
Query: 127 LGLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVN 182
+G+ +S ST+ SV C +F+ G +H K + I + + + MYAK ++
Sbjct: 233 VGMGVSQSTYASVFRSCAGLSAFKLGTQLHGHALKSDFAYDSI-IGTATLDMYAKCERMF 291
Query: 183 EARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCA 242
+A +F+ + S+ II GY +A + ++R ++ D + + C+
Sbjct: 292 DAWKVFNTLPNPPRQSYNAIIVGYARQDQGLKALDIFQSLQRNNLGFDEISLSGALTACS 351
Query: 243 QVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTS 302
+ + +H L +K G + N ++ MY KCG L A +F+ + + W +
Sbjct: 352 VIKRHLEGIQLHGLAVKCGLGFNICVANTILDMYGKCGALMEACLIFEEMERRDAVSWNA 411
Query: 303 MIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNG 362
+I + Q + ++LF +L++++ P++ T + + ACA +L+ G EI I+ +G
Sbjct: 412 IIAAHEQNEEIVKTLSLFVSMLRSTMEPDDFTYGSVVKACAGQQALNYGTEIHGRIIKSG 471
Query: 363 LESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFY 422
+ + V ++L+ M+ KCG + +A+++ R+ +K W+++I+G++ + A F
Sbjct: 472 MGLDWFVGSALVDMYGKCGMLMEAEKIHARLEEKTTVSWNSIISGFSSQKQSENAQRYFS 531
Query: 423 KMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGR 482
+M + G+ PD Y ++L C++ ++ G + + + LVD+ +
Sbjct: 532 QMLEM-GIIPDNYTYATVLDVCANMATIELGKQIHAQIL-KLQLHSDVYIASTLVDMYSK 589
Query: 483 AGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAK-----NLLTLNPGST 536
G + + P + W+ ++ A H LGE A LL + P T
Sbjct: 590 CGNMQDSRLMFEKAP-KRDYVTWSAMICAYAYHG---LGEKAINLFEEMQLLNVKPNHT 644
Score = 179 bits (454), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 126/515 (24%), Positives = 242/515 (46%), Gaps = 39/515 (7%)
Query: 31 FTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDE 90
TF +L+ C+N+ ++ GK+VH+ ++ GF +V L+ Y K S + KV D
Sbjct: 7 LTFSHILQKCSNLKALNPGKQVHTQMIVTGFVPTIYVANCLLQFYCKSSKMNYAFKVFDR 66
Query: 91 MPVR-----------------------------LRSVVSWNSIISAHSRACLNDEAILVL 121
MP R R VVSWNS++S + +N ++I +
Sbjct: 67 MPQRDVISWNTLIFGYAGIGNMGFAQSLFDSMPERDVVSWNSLLSCYLHNGVNRKSIEIF 126
Query: 122 KEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAK 177
M L + +TF ++ CS + G+ +HC ++G N++ ++++ MY+K
Sbjct: 127 VRMRSLKIPHDYATFAVILKACSGIEDYGLGLQVHCLAIQMGF-ENDVVTGSALVDMYSK 185
Query: 178 FGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNL 237
K+++A +F E+ E ++V W+ +I GYV E L M ++ + + ++
Sbjct: 186 CKKLDDAFRVFREMPERNLVCWSAVIAGYVQNDRFIEGLKLFKDMLKVGMGVSQSTYASV 245
Query: 238 ILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSV 297
CA + L +H LKS + + + + MY KC + A +VF+ +
Sbjct: 246 FRSCAGLSAFKLGTQLHGHALKSDFAYDSIIGTATLDMYAKCERMFDAWKVFNTLPNPPR 305
Query: 298 FLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEY 357
+ ++I GYA+ +A+++F+ L + ++ +E +L+ L+AC+ + +G ++
Sbjct: 306 QSYNAIIVGYARQDQGLKALDIFQSLQRNNLGFDEISLSGALTACSVIKRHLEGIQLHGL 365
Query: 358 IVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQA 417
V GL N V +++ M+ KCG + +A +FE + +D W+A+I + + +
Sbjct: 366 AVKCGLGFNICVANTILDMYGKCGALMEACLIFEEMERRDAVSWNAIIAAHEQNEEIVKT 425
Query: 418 LNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFF-KSMQSNFGIEPSIEHYLCL 476
L+LF M ++PD Y S++ AC+ ++ G + ++S G++ + L
Sbjct: 426 LSLFVSMLR-STMEPDDFTYGSVVKACAGQQALNYGTEIHGRIIKSGMGLDWFVGS--AL 482
Query: 477 VDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSA 511
VD+ G+ G + + IH E W ++S
Sbjct: 483 VDMYGKCGML-MEAEKIHARLEEKTTVSWNSIISG 516
>gi|357507065|ref|XP_003623821.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498836|gb|AES80039.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 837
Score = 387 bits (994), Expect = e-105, Method: Compositional matrix adjust.
Identities = 205/609 (33%), Positives = 349/609 (57%), Gaps = 8/609 (1%)
Query: 13 ETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLI 72
E + SM G + FT VL+ C+++ I G+ +H V+K GF+ + FV TGL+
Sbjct: 145 EAFDLFRSMRLEGWKASQFTLGSVLRVCSSLGLIQTGEMIHGFVVKNGFEGNVFVVTGLV 204
Query: 73 DMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELS 132
DMY+KC + + + ++ V W ++++ +++ +A+ + M G+E +
Sbjct: 205 DMYAKCKCVSEAEFLFKGLEFDRKNHVLWTAMVTGYAQNGDGYKAVEFFRYMHAQGVECN 264
Query: 133 ASTFVSVVSGCSFRQ----GISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIF 188
TF ++++ CS G +H + K G +N + + ++++ MYAK G + A+++
Sbjct: 265 QYTFPTILTACSSVLARCFGEQVHGFIVKSGFGSN-VYVQSALVDMYAKCGDLKNAKNML 323
Query: 189 DEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLF 248
+ + + +VSW +++ G+V G EA L M ++ D F + +L C VG++
Sbjct: 324 ETMEDDDVVSWNSLMVGFVRHGLEEEALRLFKNMHGRNMKIDDYTFPS-VLNCCVVGSI- 381
Query: 249 LALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYA 308
S+H L++K+G+ N + N LV MY K GD++ A VF+ +LEK V WTS++ GYA
Sbjct: 382 NPKSVHGLIIKTGFENYKLVSNALVDMYAKTGDMDCAYTVFEKMLEKDVISWTSLVTGYA 441
Query: 309 QLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQ 368
Q E++ +F + T V P++ +A+ LSACAEL L GK++ + +GL ++
Sbjct: 442 QNNSHEESLKIFCDMRVTGVNPDQFIVASILSACAELTLLEFGKQVHLDFIKSGLRWSQS 501
Query: 369 VQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVE 428
V SL+ M++KCG ++ A +F + KD+ W+A+I GYA +G G +L FY
Sbjct: 502 VYNSLVAMYAKCGCLDDADAIFVSMQVKDVITWTAIIVGYAQNGKGRNSLK-FYDAMVSS 560
Query: 429 GLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDL 488
G +PD + + +L ACSH+G+VD+G +F+ M +GI+P EHY C++DL GR+G+ D
Sbjct: 561 GTRPDFITFIGLLFACSHAGLVDEGRKYFQQMNKVYGIKPGPEHYACMIDLFGRSGKLDE 620
Query: 489 ALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTS 548
A + + +M V+ A VW LLSAC H N+EL E AA NL L P + Y++++N++++
Sbjct: 621 AKQLLDQMDVKPDATVWKSLLSACRVHENLELAERAATNLFELEPMNAMPYVMLSNMYSA 680
Query: 549 AGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKELHIK 608
+ W + A R LM + + KEPG S +EI+ V F++ DR H +I + E+ ++
Sbjct: 681 SRKWNDVAKIRKLMKSKGIVKEPGCSWLEINSRVNTFISDDRGHPREAEIYTKIDEIILR 740
Query: 609 LLEAGYIAE 617
+ EAGY+ +
Sbjct: 741 IKEAGYVPD 749
Score = 212 bits (539), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 119/415 (28%), Positives = 228/415 (54%), Gaps = 7/415 (1%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
M+ NG + + + M GV N +TFP +L AC+++ + G++VH ++K G
Sbjct: 236 MVTGYAQNGDGYKAVEFFRYMHAQGVECNQYTFPTILTACSSVLARCFGEQVHGFIVKSG 295
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F + +VQ+ L+DMY+KC D +++ +L+ M VVSWNS++ R L +EA+ +
Sbjct: 296 FGSNVYVQSALVDMYAKCGDLKNAKNMLETM--EDDDVVSWNSLMVGFVRHGLEEEALRL 353
Query: 121 LKEMWVLGLELSASTFVSVVSGCSFR--QGISMHCCVYKLGLLNNEIPLANSVMSMYAKF 178
K M +++ TF SV++ C S+H + K G N ++ ++N+++ MYAK
Sbjct: 354 FKNMHGRNMKIDDYTFPSVLNCCVVGSINPKSVHGLIIKTGFENYKL-VSNALVDMYAKT 412
Query: 179 GKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLI 238
G ++ A ++F+++ E ++SWT+++ GY + E+ + MR V PD + +++
Sbjct: 413 GDMDCAYTVFEKMLEKDVISWTSLVTGYAQNNSHEESLKIFCDMRVTGVNPDQFIVASIL 472
Query: 239 LGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVF 298
CA++ L +H +KSG + N LV+MY KCG L+ A +F ++ K V
Sbjct: 473 SACAELTLLEFGKQVHLDFIKSGLRWSQSVYNSLVAMYAKCGCLDDADAIFVSMQVKDVI 532
Query: 299 LWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKE-IEEY 357
WT++I GYAQ G ++ + ++ + RP+ T L AC+ G + +G++ ++
Sbjct: 533 TWTAIIVGYAQNGKGRNSLKFYDAMVSSGTRPDFITFIGLLFACSHAGLVDEGRKYFQQM 592
Query: 358 IVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDK-DLAVWSAMINGYAIH 411
+ G++ + +I +F + G++++AK++ +++ K D VW ++++ +H
Sbjct: 593 NKVYGIKPGPEHYACMIDLFGRSGKLDEAKQLLDQMDVKPDATVWKSLLSACRVH 647
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 128/486 (26%), Positives = 227/486 (46%), Gaps = 52/486 (10%)
Query: 55 HVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAH------ 108
H + + L++ SK +RK+ D+MP + SWN++IS++
Sbjct: 55 HTTTAASYESIYQTNQLLNQLSKSGQVNDARKLFDKMP--QKDEYSWNTMISSYVNVGRL 112
Query: 109 --SRACLND-----------------------EAILVLKEMWVLGLELSASTFVSVVSGC 143
+R + EA + + M + G + S T SV+ C
Sbjct: 113 VEARELFDGCSCKSSITWSSIISGYCKFGCKVEAFDLFRSMRLEGWKASQFTLGSVLRVC 172
Query: 144 S----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFD--EIGETSIV 197
S + G +H V K G N + + ++ MYAK V+EA +F E + V
Sbjct: 173 SSLGLIQTGEMIHGFVVKNGFEGN-VFVVTGLVDMYAKCKCVSEAEFLFKGLEFDRKNHV 231
Query: 198 SWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLL 257
WT ++ GY G+ +A M V + F ++ C+ V +H +
Sbjct: 232 LWTAMVTGYAQNGDGYKAVEFFRYMHAQGVECNQYTFPTILTACSSVLARCFGEQVHGFI 291
Query: 258 LKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAV 317
+KSG+ + + + LV MY KCGDL+ A+ + + + + V W S++ G+ + G EA+
Sbjct: 292 VKSGFGSNVYVQSALVDMYAKCGDLKNAKNMLETMEDDDVVSWNSLMVGFVRHGLEEEAL 351
Query: 318 NLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMF 377
LFK + +++ ++ T + L+ C +GS++ K + I+ G E+ + V +L+ M+
Sbjct: 352 RLFKNMHGRNMKIDDYTFPSVLNCCV-VGSINP-KSVHGLIIKTGFENYKLVSNALVDMY 409
Query: 378 SKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVY 437
+K G ++ A VFE++ +KD+ W++++ GYA + +++L +F M+ V G+ PD +
Sbjct: 410 AKTGDMDCAYTVFEKMLEKDVISWTSLVTGYAQNNSHEESLKIFCDMR-VTGVNPDQFIV 468
Query: 438 TSILSACSHSGMVDDG----LSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTI 493
SILSAC+ +++ G L F KS G+ S Y LV + + G D A
Sbjct: 469 ASILSACAELTLLEFGKQVHLDFIKS-----GLRWSQSVYNSLVAMYAKCGCLDDADAIF 523
Query: 494 HEMPVE 499
M V+
Sbjct: 524 VSMQVK 529
>gi|359497798|ref|XP_003635646.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like, partial [Vitis vinifera]
Length = 809
Score = 387 bits (994), Expect = e-105, Method: Compositional matrix adjust.
Identities = 221/631 (35%), Positives = 356/631 (56%), Gaps = 14/631 (2%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
M+ NN + + T+ ML+ G + N + F V++AC+N N W G+ ++ V+K G
Sbjct: 99 MVSCFANNSMEWQAIWTFLDMLELGFYPNEYCFAAVIRACSNANYAWVGEIIYGFVVKTG 158
Query: 61 F-QQDAFVQTGLIDMYSKCS-DFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAI 118
+ + D V LIDM+ K S D S+ KV D+MP R ++V+W +I+ ++ +AI
Sbjct: 159 YLEADVCVGCELIDMFVKGSGDLGSAYKVFDKMPER--NLVTWTLMITRFAQLGCARDAI 216
Query: 119 LVLKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSM 174
+ +M + G T+ SV+S C+ G +H V +LGL ++ + S++ M
Sbjct: 217 DLFLDMELSGYVPDRFTYSSVLSACTELGLLALGKQLHSRVIRLGLAL-DVCVGCSLVDM 275
Query: 175 YAKF---GKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVN-EAFGLCNQMRRMSVTPD 230
YAK G V+++R +F+++ E +++SWT II YV G + EA L +M + P+
Sbjct: 276 YAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYVQSGECDKEAIELFCKMISGHIRPN 335
Query: 231 LVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFD 290
F +++ C + + + ++S +K G + + + N L+SMY + G +E AR+ FD
Sbjct: 336 HFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFD 395
Query: 291 AVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSK 350
+ EK++ + +++ GYA+ EA LF + T + + T A+ LS A +G++ K
Sbjct: 396 ILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGK 455
Query: 351 GKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAI 410
G++I ++ G +SN+ + +LI M+S+CG I A +VF + D+++ W++MI G+A
Sbjct: 456 GEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAK 515
Query: 411 HGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSI 470
HG +AL +F+KM G KP+ + Y ++LSACSH GM+ +G F SM GI P +
Sbjct: 516 HGFATRALEMFHKMLET-GTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRM 574
Query: 471 EHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLT 530
EHY C+VDLLGR+G A++ I+ MP+ A VW LL AC H N ELG +AA+ +L
Sbjct: 575 EHYACMVDLLGRSGLLVEAMEFINSMPLMADALVWRTLLGACRVHGNTELGRHAAEMILE 634
Query: 531 LNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDR 590
P YIL++NL SAG WK+ R M +R L KE G S +E++ V F G+
Sbjct: 635 QEPDDPAAYILLSNLHASAGQWKDVVKIRKSMKERNLIKEAGCSWIEVENRVHRFHVGET 694
Query: 591 SHHLSVDIRKTLKELHIKLLEAGYIAEADIV 621
SH + I + L +L K+ E GYI + D V
Sbjct: 695 SHPQAWQIYQELDQLASKIKEMGYIPDTDFV 725
Score = 206 bits (524), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 137/517 (26%), Positives = 257/517 (49%), Gaps = 15/517 (2%)
Query: 9 GSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQ 68
G ST M Q + T+ ++LK+C + GK VH +++ G + D+ V
Sbjct: 5 GRLHHAFSTLDLMTQQNAPPDLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVL 64
Query: 69 TGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLG 128
LI +YSKC D ++R + + M + R +VSW++++S + + +AI +M LG
Sbjct: 65 NTLISLYSKCGDTETARLIFEGMGNK-RDLVSWSAMVSCFANNSMEWQAIWTFLDMLELG 123
Query: 129 LELSASTFVSVVSGCSFRQ----GISMHCCVYKLGLLNNEIPLANSVMSMYAK-FGKVNE 183
+ F +V+ CS G ++ V K G L ++ + ++ M+ K G +
Sbjct: 124 FYPNEYCFAAVIRACSNANYAWVGEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGS 183
Query: 184 ARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQ 243
A +FD++ E ++V+WT +I + +G +A L M PD + +++ C +
Sbjct: 184 AYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTE 243
Query: 244 VGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKC---GDLELARRVFDAVLEKSVFLW 300
+G L L +HS +++ G + + LV MY KC G ++ +R+VF+ + E +V W
Sbjct: 244 LGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSW 303
Query: 301 TSMIGGYAQLGY-PSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIV 359
T++I Y Q G EA+ LF +++ +RPN + ++ L AC L G+++ Y V
Sbjct: 304 TAIITAYVQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAV 363
Query: 360 LNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALN 419
G+ S V SLI M+++ GR+ A++ F+ + +K+L ++A+++GYA + ++A
Sbjct: 364 KLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFL 423
Query: 420 LFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFF-KSMQSNFGIEPSIEHYLCLVD 478
LF ++ G+ A + S+LS + G + G + ++ + I + L+
Sbjct: 424 LFNEIADT-GIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICN--ALIS 480
Query: 479 LLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKH 515
+ R G + A + +EM + W +++ KH
Sbjct: 481 MYSRCGNIEAAFQVFNEME-DRNVISWTSMITGFAKH 516
Score = 138 bits (348), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 93/314 (29%), Positives = 159/314 (50%), Gaps = 15/314 (4%)
Query: 207 VNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNED 266
++VG ++ AF + M + + PDL + L+ C + N L +H L++SG +
Sbjct: 2 LDVGRLHHAFSTLDLMTQQNAPPDLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDS 61
Query: 267 PLDNLLVSMYTKCGDLELARRVFDAVLEKSVFL-WTSMIGGYAQLGYPSEAVNLFKRLLK 325
+ N L+S+Y+KCGD E AR +F+ + K + W++M+ +A +A+ F +L+
Sbjct: 62 VVLNTLISLYSKCGDTETARLIFEGMGNKRDLVSWSAMVSCFANNSMEWQAIWTFLDMLE 121
Query: 326 TSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNG-LESNRQVQTSLIHMFSK-CGRI 383
PNE A + AC+ G+ I ++V G LE++ V LI MF K G +
Sbjct: 122 LGFYPNEYCFAAVIRACSNANYAWVGEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDL 181
Query: 384 NKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSA 443
A +VF+++P+++L W+ MI +A G A++LF M+ + G PD Y+S+LSA
Sbjct: 182 GSAYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDME-LSGYVPDRFTYSSVLSA 240
Query: 444 CSHSGMVDDGLSFFKSMQS---NFGIEPSIEHYLCLVDLLGRA---GRFDLALKTIHEMP 497
C+ G+ L+ K + S G+ + LVD+ + G D + K +MP
Sbjct: 241 CTELGL----LALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMP 296
Query: 498 VEVQAQVWAPLLSA 511
E W +++A
Sbjct: 297 -EHNVMSWTAIITA 309
>gi|302822426|ref|XP_002992871.1| hypothetical protein SELMODRAFT_136134 [Selaginella moellendorffii]
gi|300139319|gb|EFJ06062.1| hypothetical protein SELMODRAFT_136134 [Selaginella moellendorffii]
Length = 716
Score = 387 bits (994), Expect = e-104, Method: Compositional matrix adjust.
Identities = 203/629 (32%), Positives = 357/629 (56%), Gaps = 20/629 (3%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI G + L + M + G+ + F ++ AC + ++ +G+R+H H++ G
Sbjct: 1 MIAACVREGRPLQALELWGEMEERGIVADKFIVTSLVAACTKLQALEEGRRLHEHLIITG 60
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F+ D ++T L+ MY+KC +++V + M ++ + +W+SII+A++RA + A+++
Sbjct: 61 FRTDIPLETALLQMYAKCGSLDDAKRVFEGMEIK--DLFAWSSIIAAYARAGRGEMAVVL 118
Query: 121 LKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGLLNNEIP----LANSVMSMYA 176
+ M G+E + TF + GC+ G++ +++ +L +++P L +S+++MY
Sbjct: 119 YRRMIAEGVEPNVVTFACALGGCASVAGLADGRAIHQR-ILASKVPQDDVLQDSLLNMYL 177
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRM-SVTPDLVVFL 235
K ++ EAR +F+ + ++ S+T +I YV G EA L ++M ++ ++ P+ F
Sbjct: 178 KCDEMVEARKVFEGMKARNVRSYTAMISAYVQAGEHAEALELFSRMSKVEAIEPNAYTFA 237
Query: 236 NLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEK 295
++ +GNL +H L G++ + N LV+MY KCG AR+VFD++ +
Sbjct: 238 TILGAVEGLGNLEKGRKVHRHLASRGFDTNVVVQNALVTMYGKCGSPVEARKVFDSMTAR 297
Query: 296 SVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIE 355
+V WTSMI YAQ G P EA+NLFKR+ V P+ + ++ L+ACA LG+L +G+EI
Sbjct: 298 NVISWTSMIAAYAQHGNPQEALNLFKRM---DVEPSGVSFSSALNACALLGALDEGREIH 354
Query: 356 EYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGD 415
+V L S Q++TSL+ M+++CG ++ A+ VF R+ +D +AMI + HG
Sbjct: 355 HRVVEANLASP-QMETSLLSMYARCGSLDDARRVFNRMKTRDAFSCNAMIAAFTQHGRKK 413
Query: 416 QALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLC 475
QAL ++ KM+ EG+ D + + S+L ACSH+ +V D F +S+ + G+ P +EHYLC
Sbjct: 414 QALRIYRKMEQ-EGIPADGITFVSVLVACSHTSLVADCRDFLQSLVMDHGVVPLVEHYLC 472
Query: 476 LVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGS 535
+VD+LGR+GR A + + MP + A W LLS C +H +++ GE AA+ + L P
Sbjct: 473 MVDVLGRSGRLGDAEELVETMPYQADAVAWMTLLSGCKRHGDLDRGERAARKVFELAPAE 532
Query: 536 TGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLS 595
T Y+ ++N++ +A + +A R M++R +T+ S +EID + +F +G R
Sbjct: 533 TLPYVFLSNMYAAAKRFDDARRVRKEMEERGVTRPVAVSYIEIDNELHMFTSGGRDEQQE 592
Query: 596 -------VDIRKTLKELHIKLLEAGYIAE 617
+R L EL + +AGY+ +
Sbjct: 593 GHDGRTMERVRSLLVELLEPMKQAGYVPD 621
>gi|328774761|gb|AEB39780.1| pentatricopeptide repeat protein 45 [Funaria hygrometrica]
Length = 1097
Score = 387 bits (993), Expect = e-104, Method: Compositional matrix adjust.
Identities = 216/627 (34%), Positives = 349/627 (55%), Gaps = 11/627 (1%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACA--NINSIWDGKRVHSHVLK 58
MI +G +E S + M + G N T+ +L A A + +++ K VH H +
Sbjct: 392 MIGGLAQHGRGQEAFSLFLQMQRNGCLPNLTTYLSILNASAIASTSALEWVKVVHKHAEE 451
Query: 59 VGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAI 118
GF D + LI MY+KC +R V D M R V+SWN+++ ++ EA
Sbjct: 452 AGFISDLRIGNALIHMYAKCGSIDDARLVFDGMCDR--DVISWNAMMGGLAQNGCGHEAF 509
Query: 119 LVLKEMWVLGLELSASTFVSVVSGCSFRQGIS----MHCCVYKLGLLNNEIPLANSVMSM 174
V +M GL ++T++S+++ + +H + GL++ + + ++ + M
Sbjct: 510 TVFLQMQQEGLVPDSTTYLSLLNTHGSTDALEWVNEVHKHAVETGLIS-DFRVGSAFIHM 568
Query: 175 YAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVF 234
Y + G +++AR +FD++ + +W +IGG EA L QM+R PD F
Sbjct: 569 YIRCGSIDDARLLFDKLSVRHVTTWNAMIGGAAQQRCGREALSLFLQMQREGFIPDATTF 628
Query: 235 LNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLE 294
+N++ L +HS +G + + N LV Y+KCG+++ A++VFD ++E
Sbjct: 629 INILSANVDEEALEWVKEVHSHATDAGLVDL-RVGNALVHTYSKCGNVKYAKQVFDDMVE 687
Query: 295 KSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEI 354
++V WT MIGG AQ G +A + F ++L+ + P+ T + LSACA G+L KE+
Sbjct: 688 RNVTTWTMMIGGLAQHGCGHDAFSHFLQMLREGIVPDATTYVSILSACASTGALEWVKEV 747
Query: 355 EEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMG 414
+ V GL S+ +V +L+HM++KCG I+ A+ VF+ + ++D+ W+ MI G A HG G
Sbjct: 748 HNHAVSAGLVSDLRVGNALVHMYAKCGSIDDARSVFDDMVERDVFSWTVMIGGLAQHGRG 807
Query: 415 DQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYL 474
+AL+ F KM+ EG KP+ Y ++L+ACSH+G+VD+G F SM ++GIEP++EHY
Sbjct: 808 LEALDFFVKMKS-EGFKPNGYSYVAVLTACSHAGLVDEGRRQFLSMTQDYGIEPTMEHYT 866
Query: 475 CLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPG 534
C+VDLLGRAG + A I MP+E W LL AC+ + N+E+ E+AAK L L P
Sbjct: 867 CMVDLLGRAGLLEEAELFILNMPIEPDDAPWGALLGACVTYGNLEMAEFAAKERLKLKPK 926
Query: 535 STGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHL 594
S Y+L++N++ + G W++ R +M + + KEPG S +E+D + FV GD SH
Sbjct: 927 SASTYVLLSNIYAATGKWEQKLLVRSMMQRKGIRKEPGRSWIEVDNRIHSFVVGDTSHPE 986
Query: 595 SVDIRKTLKELHIKLLEAGYIAEADIV 621
S +I L +L +L GY+ + +V
Sbjct: 987 SKEIYAQLNDLIERLKAKGYVPDTRLV 1013
Score = 242 bits (618), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 155/526 (29%), Positives = 268/526 (50%), Gaps = 23/526 (4%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACA-NINSIWDGKRVHSHVLKV 59
MI G E+ + Y M Q N T+ +LKAC +N W GK++H+H+++
Sbjct: 190 MIGGYAEYGHAEDAMRVYDKMRQECGQPNEITYLSILKACCCPVNLKW-GKKIHAHIIQS 248
Query: 60 GFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAIL 119
GFQ D V+T L++MY KC ++ + D+M R+V+SW +I + EA
Sbjct: 249 GFQSDVRVETALVNMYVKCGSIEDAQLIFDKMVE--RNVISWTVMIGGLAHYGRGQEAFH 306
Query: 120 VLKEMWVLGLELSASTFVSVVS------GCSFRQGISMHCCVYKLGLLNNEIPLANSVMS 173
+ +M G ++ T+VS+++ + + + H L L ++ + N+++
Sbjct: 307 LFLQMQREGFIPNSYTYVSILNANASAGALEWVKEVHSHAVNAGLAL---DLRVGNALVH 363
Query: 174 MYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVV 233
MYAK G +++AR +FD + E I SWT +IGG G EAF L QM+R P+L
Sbjct: 364 MYAKSGSIDDARVVFDGMTERDIFSWTVMIGGLAQHGRGQEAFSLFLQMQRNGCLPNLTT 423
Query: 234 FLNLI--LGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDA 291
+L+++ A L +H ++G+ ++ + N L+ MY KCG ++ AR VFD
Sbjct: 424 YLSILNASAIASTSALEWVKVVHKHAEEAGFISDLRIGNALIHMYAKCGSIDDARLVFDG 483
Query: 292 VLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKG 351
+ ++ V W +M+GG AQ G EA +F ++ + + P+ T + L+ +L
Sbjct: 484 MCDRDVISWNAMMGGLAQNGCGHEAFTVFLQMQQEGLVPDSTTYLSLLNTHGSTDALEWV 543
Query: 352 KEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIH 411
E+ ++ V GL S+ +V ++ IHM+ +CG I+ A+ +F+++ + + W+AMI G A
Sbjct: 544 NEVHKHAVETGLISDFRVGSAFIHMYIRCGSIDDARLLFDKLSVRHVTTWNAMIGGAAQQ 603
Query: 412 GMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIE 471
G +AL+LF +MQ EG PDA + +ILSA + ++ L + K + S+ ++
Sbjct: 604 RCGREALSLFLQMQR-EGFIPDATTFINILSA----NVDEEALEWVKEVHSHATDAGLVD 658
Query: 472 HYL--CLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKH 515
+ LV + G A + +M VE W ++ +H
Sbjct: 659 LRVGNALVHTYSKCGNVKYAKQVFDDM-VERNVTTWTMMIGGLAQH 703
Score = 228 bits (582), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 135/454 (29%), Positives = 250/454 (55%), Gaps = 19/454 (4%)
Query: 4 NSTNNGSFEETLSTYSS---------MLQTGVHGNSFTFPLVLKACANINSIWDGKRVHS 54
N++ +G+ E+T + ++ +Q G+ +SF++ +L+ C I K+VH
Sbjct: 83 NASVDGAAEQTHNVITAKDAVAMLKIRVQQGIAIDSFSYVNILQRCLKQEDILLAKQVHV 142
Query: 55 HVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLN 114
++K G +Q+ +V L+ +Y +C +R+V D++ + ++ W ++I ++
Sbjct: 143 CIIKSGMEQNLYVANKLLRVYIRCGRLQCARQVFDKLLKK--NIYIWTTMIGGYAEYGHA 200
Query: 115 DEAILVLKEMWVLGLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANS 170
++A+ V +M + + T++S++ C + + G +H + + G +++ + +
Sbjct: 201 EDAMRVYDKMRQECGQPNEITYLSILKACCCPVNLKWGKKIHAHIIQSGF-QSDVRVETA 259
Query: 171 VMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPD 230
+++MY K G + +A+ IFD++ E +++SWT +IGG + G EAF L QM+R P+
Sbjct: 260 LVNMYVKCGSIEDAQLIFDKMVERNVISWTVMIGGLAHYGRGQEAFHLFLQMQREGFIPN 319
Query: 231 LVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFD 290
+++++ A G L +HS + +G + + N LV MY K G ++ AR VFD
Sbjct: 320 SYTYVSILNANASAGALEWVKEVHSHAVNAGLALDLRVGNALVHMYAKSGSIDDARVVFD 379
Query: 291 AVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTL--SACAELGSL 348
+ E+ +F WT MIGG AQ G EA +LF ++ + PN T + L SA A +L
Sbjct: 380 GMTERDIFSWTVMIGGLAQHGRGQEAFSLFLQMQRNGCLPNLTTYLSILNASAIASTSAL 439
Query: 349 SKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGY 408
K + ++ G S+ ++ +LIHM++KCG I+ A+ VF+ + D+D+ W+AM+ G
Sbjct: 440 EWVKVVHKHAEEAGFISDLRIGNALIHMYAKCGSIDDARLVFDGMCDRDVISWNAMMGGL 499
Query: 409 AIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILS 442
A +G G +A +F +MQ EGL PD+ Y S+L+
Sbjct: 500 AQNGCGHEAFTVFLQMQQ-EGLVPDSTTYLSLLN 532
Score = 208 bits (529), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 109/332 (32%), Positives = 197/332 (59%), Gaps = 6/332 (1%)
Query: 116 EAILVLKEMWVLGLELSASTFVSVVSGCSFRQGI----SMHCCVYKLGLLNNEIPLANSV 171
+A+ +LK G+ + + ++V+++ C ++ I +H C+ K G+ N + +AN +
Sbjct: 101 DAVAMLKIRVQQGIAIDSFSYVNILQRCLKQEDILLAKQVHVCIIKSGMEQN-LYVANKL 159
Query: 172 MSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDL 231
+ +Y + G++ AR +FD++ + +I WTT+IGGY G+ +A + ++MR+ P+
Sbjct: 160 LRVYIRCGRLQCARQVFDKLLKKNIYIWTTMIGGYAEYGHAEDAMRVYDKMRQECGQPNE 219
Query: 232 VVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDA 291
+ +L+++ C NL +H+ +++SG+ ++ ++ LV+MY KCG +E A+ +FD
Sbjct: 220 ITYLSILKACCCPVNLKWGKKIHAHIIQSGFQSDVRVETALVNMYVKCGSIEDAQLIFDK 279
Query: 292 VLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKG 351
++E++V WT MIGG A G EA +LF ++ + PN T + L+A A G+L
Sbjct: 280 MVERNVISWTVMIGGLAHYGRGQEAFHLFLQMQREGFIPNSYTYVSILNANASAGALEWV 339
Query: 352 KEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIH 411
KE+ + V GL + +V +L+HM++K G I+ A+ VF+ + ++D+ W+ MI G A H
Sbjct: 340 KEVHSHAVNAGLALDLRVGNALVHMYAKSGSIDDARVVFDGMTERDIFSWTVMIGGLAQH 399
Query: 412 GMGDQALNLFYKMQHVEGLKPDAVVYTSILSA 443
G G +A +LF +MQ G P+ Y SIL+A
Sbjct: 400 GRGQEAFSLFLQMQR-NGCLPNLTTYLSILNA 430
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 93/311 (29%), Positives = 176/311 (56%), Gaps = 9/311 (2%)
Query: 208 NVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDP 267
NV +A + + + D ++N++ C + ++ LA +H ++KSG
Sbjct: 95 NVITAKDAVAMLKIRVQQGIAIDSFSYVNILQRCLKQEDILLAKQVHVCIIKSGMEQNLY 154
Query: 268 LDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTS 327
+ N L+ +Y +CG L+ AR+VFD +L+K++++WT+MIGGYA+ G+ +A+ ++ ++ +
Sbjct: 155 VANKLLRVYIRCGRLQCARQVFDKLLKKNIYIWTTMIGGYAEYGHAEDAMRVYDKMRQEC 214
Query: 328 VRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAK 387
+PNE T + L AC +L GK+I +I+ +G +S+ +V+T+L++M+ KCG I A+
Sbjct: 215 GQPNEITYLSILKACCCPVNLKWGKKIHAHIIQSGFQSDVRVETALVNMYVKCGSIEDAQ 274
Query: 388 EVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHS 447
+F+++ ++++ W+ MI G A +G G +A +LF +MQ EG P++ Y SIL+A + +
Sbjct: 275 LIFDKMVERNVISWTVMIGGLAHYGRGQEAFHLFLQMQR-EGFIPNSYTYVSILNANASA 333
Query: 448 GMVDDGLSFFKSMQS---NFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQV 504
G L + K + S N G+ + LV + ++G D A + + + E
Sbjct: 334 G----ALEWVKEVHSHAVNAGLALDLRVGNALVHMYAKSGSIDDA-RVVFDGMTERDIFS 388
Query: 505 WAPLLSACMKH 515
W ++ +H
Sbjct: 389 WTVMIGGLAQH 399
>gi|449439005|ref|XP_004137278.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Cucumis sativus]
gi|449476583|ref|XP_004154777.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Cucumis sativus]
Length = 816
Score = 387 bits (993), Expect = e-104, Method: Compositional matrix adjust.
Identities = 211/628 (33%), Positives = 348/628 (55%), Gaps = 14/628 (2%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTG-VHGNSFTFPLVLKACANINSIWDGKRVHSHVLKV 59
MI G F + ++ L T + + +TFP V++AC N++ DG++VH VLK+
Sbjct: 112 MISAYARIGHFHAAVDCFNEFLSTSFLQSDHYTFPPVIRACGNLD---DGRKVHCLVLKL 168
Query: 60 GFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAIL 119
GF+ D ++ I YS+ + + D M +R + +WN++IS EA+
Sbjct: 169 GFECDVYIAASFIHFYSRFGFVSLACNLFDNMMIR--DIGTWNAMISGFYLNGKVAEALE 226
Query: 120 VLKEMWVLGLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMY 175
V EM + + + T S++ C G+ +H KLGL ++ + N++++MY
Sbjct: 227 VFDEMRFKSVSMDSVTISSLLPICVQLDDIISGVLIHVYAIKLGL-EFDLFVCNALINMY 285
Query: 176 AKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFL 235
AKFG++ A +IF+++ IVSW +++ + A G+ N+M + V PDL+ +
Sbjct: 286 AKFGELRSAETIFNQMKVRDIVSWNSLLAAFEQNKKPVIALGVYNKMHSIGVVPDLLTLV 345
Query: 236 NLILGCAQVGNLFLALSMHSLLLKSGYNNED-PLDNLLVSMYTKCGDLELARRVFDAVLE 294
+L A++GN + S+H + + + D L N ++ MY K G ++ AR+VF+ +
Sbjct: 346 SLASVAAELGNFLSSRSIHGFVTRRCWFLHDIALGNAIIDMYAKLGFIDSARKVFEGLPV 405
Query: 295 KSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTS-VRPNEATLATTLSACAELGSLSKGKE 353
K V W S+I GY+Q G +EA++++ + S PN+ T + L+A ++LG+L +G +
Sbjct: 406 KDVISWNSLITGYSQNGLANEAIDVYSSMRYYSGAVPNQGTWVSILTAHSQLGALKQGMK 465
Query: 354 IEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGM 413
++ N L + V T L+ M+ KCG++ A +F VP + W+A+I+ + +HG
Sbjct: 466 AHGQLIKNFLYFDIFVSTCLVDMYGKCGKLADALSLFYEVPHQSSVSWNAIISCHGLHGY 525
Query: 414 GDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHY 473
G +A+ LF +MQ EG+KPD + + S+LSACSHSG+VD+G F+ MQ +GI PS++HY
Sbjct: 526 GLKAVKLFKEMQS-EGVKPDHITFVSLLSACSHSGLVDEGQWCFQLMQETYGIRPSLKHY 584
Query: 474 LCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNP 533
C+VDL GRAG + A + MPV VW LL AC H NVEL + +LL +
Sbjct: 585 GCMVDLFGRAGHLEKAFNFVKNMPVRPDVSVWGALLGACRIHENVELVRTVSDHLLKVES 644
Query: 534 GSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHH 593
+ G Y+L++N++ G W+ R L DR L K PGWS +E+D + VF G+++H
Sbjct: 645 ENVGYYVLLSNIYAKLGHWEGVDEVRSLARDRGLKKTPGWSSIEVDKKIDVFYTGNQTHP 704
Query: 594 LSVDIRKTLKELHIKLLEAGYIAEADIV 621
+I L+ L K+ GY+ + + V
Sbjct: 705 KCEEIYSELRNLTAKMKSIGYVPDYNFV 732
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 129/465 (27%), Positives = 240/465 (51%), Gaps = 8/465 (1%)
Query: 49 GKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAH 108
K++H+ ++ G Q F+ LI+ Y+ D +R D+ ++ + V +WNS+ISA+
Sbjct: 59 AKQLHALLVVSGKTQSIFLSAKLINRYAFLGDIPHARLTFDQ--IQTKDVYTWNSMISAY 116
Query: 109 SRACLNDEAILVLKEMWVLG-LELSASTFVSVVSGC-SFRQGISMHCCVYKLGLLNNEIP 166
+R A+ E L+ TF V+ C + G +HC V KLG ++
Sbjct: 117 ARIGHFHAAVDCFNEFLSTSFLQSDHYTFPPVIRACGNLDDGRKVHCLVLKLG-FECDVY 175
Query: 167 LANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMS 226
+A S + Y++FG V+ A ++FD + I +W +I G+ G V EA + ++MR S
Sbjct: 176 IAASFIHFYSRFGFVSLACNLFDNMMIRDIGTWNAMISGFYLNGKVAEALEVFDEMRFKS 235
Query: 227 VTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELAR 286
V+ D V +L+ C Q+ ++ + +H +K G + + N L++MY K G+L A
Sbjct: 236 VSMDSVTISSLLPICVQLDDIISGVLIHVYAIKLGLEFDLFVCNALINMYAKFGELRSAE 295
Query: 287 RVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELG 346
+F+ + + + W S++ + Q P A+ ++ ++ V P+ TL + S AELG
Sbjct: 296 TIFNQMKVRDIVSWNSLLAAFEQNKKPVIALGVYNKMHSIGVVPDLLTLVSLASVAAELG 355
Query: 347 SLSKGKEIEEYIVLNG-LESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMI 405
+ + I ++ + + ++I M++K G I+ A++VFE +P KD+ W+++I
Sbjct: 356 NFLSSRSIHGFVTRRCWFLHDIALGNAIIDMYAKLGFIDSARKVFEGLPVKDVISWNSLI 415
Query: 406 NGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFG 465
GY+ +G+ ++A++++ M++ G P+ + SIL+A S G + G+ + NF
Sbjct: 416 TGYSQNGLANEAIDVYSSMRYYSGAVPNQGTWVSILTAHSQLGALKQGMKAHGQLIKNF- 474
Query: 466 IEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLS 510
+ I CLVD+ G+ G+ AL +E+P + W ++S
Sbjct: 475 LYFDIFVSTCLVDMYGKCGKLADALSLFYEVPHQSSVS-WNAIIS 518
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 94/399 (23%), Positives = 182/399 (45%), Gaps = 8/399 (2%)
Query: 165 IPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRR 224
I L+ +++ YA G + AR FD+I + +W ++I Y +G+ + A N+
Sbjct: 75 IFLSAKLINRYAFLGDIPHARLTFDQIQTKDVYTWNSMISAYARIGHFHAAVDCFNEFLS 134
Query: 225 MS-VTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLE 283
S + D F +I C GNL +H L+LK G+ + + + Y++ G +
Sbjct: 135 TSFLQSDHYTFPPVIRAC---GNLDDGRKVHCLVLKLGFECDVYIAASFIHFYSRFGFVS 191
Query: 284 LARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACA 343
LA +FD ++ + + W +MI G+ G +EA+ +F + SV + T+++ L C
Sbjct: 192 LACNLFDNMMIRDIGTWNAMISGFYLNGKVAEALEVFDEMRFKSVSMDSVTISSLLPICV 251
Query: 344 ELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSA 403
+L + G I Y + GLE + V +LI+M++K G + A+ +F ++ +D+ W++
Sbjct: 252 QLDDIISGVLIHVYAIKLGLEFDLFVCNALINMYAKFGELRSAETIFNQMKVRDIVSWNS 311
Query: 404 MINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSN 463
++ + + AL ++ KM H G+ PD + S+ S + G S +
Sbjct: 312 LLAAFEQNKKPVIALGVYNKM-HSIGVVPDLLTLVSLASVAAELGNFLSSRSIHGFVTRR 370
Query: 464 FGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKH--HNVELG 521
I ++D+ + G D A K +PV+ W L++ ++ N +
Sbjct: 371 CWFLHDIALGNAIIDMYAKLGFIDSARKVFEGLPVK-DVISWNSLITGYSQNGLANEAID 429
Query: 522 EYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARG 560
Y++ + + G ++ + + G K+ A G
Sbjct: 430 VYSSMRYYSGAVPNQGTWVSILTAHSQLGALKQGMKAHG 468
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 81/283 (28%), Positives = 143/283 (50%), Gaps = 18/283 (6%)
Query: 234 FLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVL 293
F + L C +V LA +H+LL+ SG L L++ Y GD+ AR FD +
Sbjct: 46 FNRIFLYCTKV---HLAKQLHALLVVSGKTQSIFLSAKLINRYAFLGDIPHARLTFDQIQ 102
Query: 294 EKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTS-VRPNEATLATTLSACAELGSLSKGK 352
K V+ W SMI YA++G+ AV+ F L TS ++ + T + AC G+L G+
Sbjct: 103 TKDVYTWNSMISAYARIGHFHAAVDCFNEFLSTSFLQSDHYTFPPVIRAC---GNLDDGR 159
Query: 353 EIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHG 412
++ ++ G E + + S IH +S+ G ++ A +F+ + +D+ W+AMI+G+ ++G
Sbjct: 160 KVHCLVLKLGFECDVYIAASFIHFYSRFGFVSLACNLFDNMMIRDIGTWNAMISGFYLNG 219
Query: 413 MGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLS--FFKSMQSNFGIEPSI 470
+AL +F +M+ + + D+V +S+L C +DD +S G+E
Sbjct: 220 KVAEALEVFDEMR-FKSVSMDSVTISSLLPICVQ---LDDIISGVLIHVYAIKLGLE--F 273
Query: 471 EHYLC--LVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSA 511
+ ++C L+++ + G A ++M V W LL+A
Sbjct: 274 DLFVCNALINMYAKFGELRSAETIFNQMKVR-DIVSWNSLLAA 315
>gi|296083564|emb|CBI23556.3| unnamed protein product [Vitis vinifera]
Length = 827
Score = 387 bits (993), Expect = e-104, Method: Compositional matrix adjust.
Identities = 221/631 (35%), Positives = 356/631 (56%), Gaps = 14/631 (2%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
M+ NN + + T+ ML+ G + N + F V++AC+N N W G+ ++ V+K G
Sbjct: 117 MVSCFANNSMEWQAIWTFLDMLELGFYPNEYCFAAVIRACSNANYAWVGEIIYGFVVKTG 176
Query: 61 F-QQDAFVQTGLIDMYSKCS-DFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAI 118
+ + D V LIDM+ K S D S+ KV D+MP R ++V+W +I+ ++ +AI
Sbjct: 177 YLEADVCVGCELIDMFVKGSGDLGSAYKVFDKMPER--NLVTWTLMITRFAQLGCARDAI 234
Query: 119 LVLKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSM 174
+ +M + G T+ SV+S C+ G +H V +LGL ++ + S++ M
Sbjct: 235 DLFLDMELSGYVPDRFTYSSVLSACTELGLLALGKQLHSRVIRLGLAL-DVCVGCSLVDM 293
Query: 175 YAKF---GKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVN-EAFGLCNQMRRMSVTPD 230
YAK G V+++R +F+++ E +++SWT II YV G + EA L +M + P+
Sbjct: 294 YAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYVQSGECDKEAIELFCKMISGHIRPN 353
Query: 231 LVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFD 290
F +++ C + + + ++S +K G + + + N L+SMY + G +E AR+ FD
Sbjct: 354 HFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFD 413
Query: 291 AVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSK 350
+ EK++ + +++ GYA+ EA LF + T + + T A+ LS A +G++ K
Sbjct: 414 ILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGK 473
Query: 351 GKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAI 410
G++I ++ G +SN+ + +LI M+S+CG I A +VF + D+++ W++MI G+A
Sbjct: 474 GEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAK 533
Query: 411 HGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSI 470
HG +AL +F+KM G KP+ + Y ++LSACSH GM+ +G F SM GI P +
Sbjct: 534 HGFATRALEMFHKMLET-GTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRM 592
Query: 471 EHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLT 530
EHY C+VDLLGR+G A++ I+ MP+ A VW LL AC H N ELG +AA+ +L
Sbjct: 593 EHYACMVDLLGRSGLLVEAMEFINSMPLMADALVWRTLLGACRVHGNTELGRHAAEMILE 652
Query: 531 LNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDR 590
P YIL++NL SAG WK+ R M +R L KE G S +E++ V F G+
Sbjct: 653 QEPDDPAAYILLSNLHASAGQWKDVVKIRKSMKERNLIKEAGCSWIEVENRVHRFHVGET 712
Query: 591 SHHLSVDIRKTLKELHIKLLEAGYIAEADIV 621
SH + I + L +L K+ E GYI + D V
Sbjct: 713 SHPQAWQIYQELDQLASKIKEMGYIPDTDFV 743
Score = 206 bits (523), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 137/517 (26%), Positives = 257/517 (49%), Gaps = 15/517 (2%)
Query: 9 GSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQ 68
G ST M Q + T+ ++LK+C + GK VH +++ G + D+ V
Sbjct: 23 GRLHHAFSTLDLMTQQNAPPDLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVL 82
Query: 69 TGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLG 128
LI +YSKC D ++R + + M + R +VSW++++S + + +AI +M LG
Sbjct: 83 NTLISLYSKCGDTETARLIFEGMGNK-RDLVSWSAMVSCFANNSMEWQAIWTFLDMLELG 141
Query: 129 LELSASTFVSVVSGCSFRQ----GISMHCCVYKLGLLNNEIPLANSVMSMYAK-FGKVNE 183
+ F +V+ CS G ++ V K G L ++ + ++ M+ K G +
Sbjct: 142 FYPNEYCFAAVIRACSNANYAWVGEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGS 201
Query: 184 ARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQ 243
A +FD++ E ++V+WT +I + +G +A L M PD + +++ C +
Sbjct: 202 AYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTE 261
Query: 244 VGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKC---GDLELARRVFDAVLEKSVFLW 300
+G L L +HS +++ G + + LV MY KC G ++ +R+VF+ + E +V W
Sbjct: 262 LGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSW 321
Query: 301 TSMIGGYAQLGY-PSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIV 359
T++I Y Q G EA+ LF +++ +RPN + ++ L AC L G+++ Y V
Sbjct: 322 TAIITAYVQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAV 381
Query: 360 LNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALN 419
G+ S V SLI M+++ GR+ A++ F+ + +K+L ++A+++GYA + ++A
Sbjct: 382 KLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFL 441
Query: 420 LFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFF-KSMQSNFGIEPSIEHYLCLVD 478
LF ++ G+ A + S+LS + G + G + ++ + I + L+
Sbjct: 442 LFNEIADT-GIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICN--ALIS 498
Query: 479 LLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKH 515
+ R G + A + +EM + W +++ KH
Sbjct: 499 MYSRCGNIEAAFQVFNEME-DRNVISWTSMITGFAKH 534
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 93/314 (29%), Positives = 159/314 (50%), Gaps = 15/314 (4%)
Query: 207 VNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNED 266
++VG ++ AF + M + + PDL + L+ C + N L +H L++SG +
Sbjct: 20 LDVGRLHHAFSTLDLMTQQNAPPDLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDS 79
Query: 267 PLDNLLVSMYTKCGDLELARRVFDAVLEKSVFL-WTSMIGGYAQLGYPSEAVNLFKRLLK 325
+ N L+S+Y+KCGD E AR +F+ + K + W++M+ +A +A+ F +L+
Sbjct: 80 VVLNTLISLYSKCGDTETARLIFEGMGNKRDLVSWSAMVSCFANNSMEWQAIWTFLDMLE 139
Query: 326 TSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNG-LESNRQVQTSLIHMFSK-CGRI 383
PNE A + AC+ G+ I ++V G LE++ V LI MF K G +
Sbjct: 140 LGFYPNEYCFAAVIRACSNANYAWVGEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDL 199
Query: 384 NKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSA 443
A +VF+++P+++L W+ MI +A G A++LF M+ + G PD Y+S+LSA
Sbjct: 200 GSAYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDME-LSGYVPDRFTYSSVLSA 258
Query: 444 CSHSGMVDDGLSFFKSMQS---NFGIEPSIEHYLCLVDLLGRA---GRFDLALKTIHEMP 497
C+ G+ L+ K + S G+ + LVD+ + G D + K +MP
Sbjct: 259 CTELGL----LALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMP 314
Query: 498 VEVQAQVWAPLLSA 511
E W +++A
Sbjct: 315 -EHNVMSWTAIITA 327
>gi|297849508|ref|XP_002892635.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338477|gb|EFH68894.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 809
Score = 386 bits (992), Expect = e-104, Method: Compositional matrix adjust.
Identities = 215/625 (34%), Positives = 346/625 (55%), Gaps = 8/625 (1%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
M++ ++ L + M V + F +LK C + + GK +H ++K G
Sbjct: 106 MLKGFAKVSDLDKALKFFVRMRDDEVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSG 165
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F D F TGL +MY+KC +RKV D MP R +VSWN+I++ +S+ + A+ +
Sbjct: 166 FSLDLFAMTGLENMYAKCRQVHEARKVFDRMPER--DLVSWNTIVAGYSQNGMARMALEM 223
Query: 121 LKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
+ M L+ S T VSV+ S R G +H + G ++ + +A +++ MYA
Sbjct: 224 VNLMCEENLKPSFITIVSVLPAVSALRLIRIGKEIHGYAMRAGF-DSLVNIATALVDMYA 282
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K G + AR +FD + E ++VSW ++I YV N EA + +M V P V +
Sbjct: 283 KCGSLKTARLLFDGMLERNVVSWNSMIDAYVQNENPKEAMVIFQKMLDEGVKPTDVSVMG 342
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
+ CA +G+L +H L ++ + + N L+SMY KC +++ A +F + ++
Sbjct: 343 ALHACADLGDLERGRFIHKLSVELELDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRT 402
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEE 356
+ W +MI G+AQ G P EA+N F ++ +V+P+ T + ++A AEL K I
Sbjct: 403 IVSWNAMILGFAQNGRPIEALNYFSQMQARTVKPDTFTYVSVITAIAELSITHHAKWIHG 462
Query: 357 YIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQ 416
++ N L+ N V T+L+ M++KCG I A+ +F+ + ++ + W+AMI+GY HG+G
Sbjct: 463 VVMRNCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGIGKA 522
Query: 417 ALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCL 476
AL LF +MQ ++P+ V + S++SACSHSG+V+ GL F M+ N+ IEPS++HY +
Sbjct: 523 ALELFEEMQK-GTIRPNGVTFLSVISACSHSGLVEAGLKCFHMMKENYSIEPSMDHYGAM 581
Query: 477 VDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGST 536
VDLLGRAGR + A I +MPV+ V+ +L AC H NV E A+ L LNP
Sbjct: 582 VDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKVAERLFELNPEDG 641
Query: 537 GNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSV 596
G ++L+AN++ +A MW++ R M + L K PG S VEI V F +G +H S
Sbjct: 642 GYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMVEIKNEVHSFFSGSTAHPSSK 701
Query: 597 DIRKTLKELHIKLLEAGYIAEADIV 621
I L++L ++ EAGY+ + +++
Sbjct: 702 KIYAFLEKLICQIKEAGYVPDTNLI 726
Score = 199 bits (507), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 131/501 (26%), Positives = 244/501 (48%), Gaps = 25/501 (4%)
Query: 26 VHGNSFTFP--LVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVS 83
+ N + P L+L+ C+++ + + + + K G Q+ QT L+ ++ +
Sbjct: 31 IPANVYEHPAALLLERCSSLKEL---RHILPLIFKNGLYQEHLFQTKLVSLFCRYGSVDE 87
Query: 84 SRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGC 143
+ +V + P+ + V + +++ ++ D+A+ M +E F ++ C
Sbjct: 88 AARVFE--PIDKKLNVLYYTMLKGFAKVSDLDKALKFFVRMRDDEVEPVVYNFTYLLKVC 145
Query: 144 ----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSW 199
R G +H + K G + ++ + +MYAK +V+EAR +FD + E +VSW
Sbjct: 146 GDEAELRVGKEIHGLLVKSGF-SLDLFAMTGLENMYAKCRQVHEARKVFDRMPERDLVSW 204
Query: 200 TTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLK 259
TI+ GY G A + N M ++ P + ++++ + + + + +H ++
Sbjct: 205 NTIVAGYSQNGMARMALEMVNLMCEENLKPSFITIVSVLPAVSALRLIRIGKEIHGYAMR 264
Query: 260 SGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNL 319
+G+++ + LV MY KCG L+ AR +FD +LE++V W SMI Y Q P EA+ +
Sbjct: 265 AGFDSLVNIATALVDMYAKCGSLKTARLLFDGMLERNVVSWNSMIDAYVQNENPKEAMVI 324
Query: 320 FKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSK 379
F+++L V+P + ++ L ACA+LG L +G+ I + V L+ N V SLI M+ K
Sbjct: 325 FQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELELDRNVSVVNSLISMYCK 384
Query: 380 CGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTS 439
C ++ A +F ++ + + W+AMI G+A +G +ALN F +MQ +KPD Y S
Sbjct: 385 CKEVDTAASMFGKLQSRTIVSWNAMILGFAQNGRPIEALNYFSQMQ-ARTVKPDTFTYVS 443
Query: 440 ILSA-----CSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIH 494
+++A +H G+ + N + + LVD+ + G +A + I
Sbjct: 444 VITAIAELSITHHAKWIHGVVMRNCLDKNVFVTTA------LVDMYAKCGAIMIA-RLIF 496
Query: 495 EMPVEVQAQVWAPLLSACMKH 515
+M E W ++ H
Sbjct: 497 DMMSERHVTTWNAMIDGYGTH 517
>gi|297738694|emb|CBI27939.3| unnamed protein product [Vitis vinifera]
Length = 764
Score = 386 bits (992), Expect = e-104, Method: Compositional matrix adjust.
Identities = 207/615 (33%), Positives = 338/615 (54%), Gaps = 9/615 (1%)
Query: 11 FEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTG 70
+E + + M T + N F F ++ A A++ G+ +H+ V K GF+ D +
Sbjct: 71 LQEAVQLFYLMRHTRIRLNQFIFASLISAAASLGDNHYGESIHACVCKYGFESDILISNA 130
Query: 71 LIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLE 130
+ MY K + + M + ++ S N+++S D+ +L ++ V G E
Sbjct: 131 FVTMYMKTQSVENGWQFFKAMMIE--NLASRNNLLSGFCDTETCDQGPRILIQLLVEGFE 188
Query: 131 LSASTFVSVVSGCSFR----QGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARS 186
+ TF+S++ C+ + +G ++H V K G+ N + L NS++++YAK G N A
Sbjct: 189 PNMYTFISILKTCASKGDLNEGKAIHGQVIKSGI-NPDSHLWNSLVNVYAKCGSANYACK 247
Query: 187 IFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGN 246
+F EI E +VSWT +I G+V G + NQM P++ F++++ C+ + +
Sbjct: 248 VFGEIPERDVVSWTALITGFVAEG-YGSGLRIFNQMLAEGFNPNMYTFISILRSCSSLSD 306
Query: 247 LFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGG 306
+ L +H+ ++K+ + D + LV MY K LE A +F+ ++++ +F WT ++ G
Sbjct: 307 VDLGKQVHAQIVKNSLDGNDFVGTALVDMYAKNRFLEDAETIFNRLIKRDLFAWTVIVAG 366
Query: 307 YAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESN 366
YAQ G +AV F ++ + V+PNE TLA++LS C+ + +L G+++ + G +
Sbjct: 367 YAQDGQGEKAVKCFIQMQREGVKPNEFTLASSLSGCSRIATLDSGRQLHSMAIKAGQSGD 426
Query: 367 RQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQH 426
V ++L+ M++KCG + A+ VF+ + +D W+ +I GY+ HG G +AL F M
Sbjct: 427 MFVASALVDMYAKCGCVEDAEVVFDGLVSRDTVSWNTIICGYSQHGQGGKALKAFEAMLD 486
Query: 427 VEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRF 486
EG PD V + +LSACSH G++++G F S+ +GI P+IEHY C+VD+LGRAG+F
Sbjct: 487 -EGTVPDEVTFIGVLSACSHMGLIEEGKKHFNSLSKIYGITPTIEHYACMVDILGRAGKF 545
Query: 487 DLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLF 546
I EM + +W +L AC H N+E GE AA L L P NYIL++N+F
Sbjct: 546 HEVESFIEEMKLTSNVLIWETVLGACKMHGNIEFGERAAMKLFELEPEIDSNYILLSNMF 605
Query: 547 TSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKELH 606
+ GMW + R LM R + KEPG S VE++G V VF++ D SH +I L++LH
Sbjct: 606 AAKGMWDDVTNVRALMSTRGVKKEPGCSWVEVNGQVHVFLSHDGSHPKIREIHLKLQDLH 665
Query: 607 IKLLEAGYIAEADIV 621
KL+ GY D V
Sbjct: 666 QKLMSVGYTPNTDHV 680
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 127/439 (28%), Positives = 223/439 (50%), Gaps = 10/439 (2%)
Query: 50 KRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHS 109
K++ V+K G D+ + + L+++Y KC +R+VL+EMP+ + V WN +S+ +
Sbjct: 9 KKIIFRVIKNGICPDSHLWSSLVNVYVKCESLQCARQVLEEMPI--QDVQQWNQKLSSAN 66
Query: 110 RACLNDEAILVLKEMWVLGLELSASTFVSVVSGCSF----RQGISMHCCVYKLGLLNNEI 165
EA+ + M + L+ F S++S + G S+H CV K G ++I
Sbjct: 67 SPYPLQEAVQLFYLMRHTRIRLNQFIFASLISAAASLGDNHYGESIHACVCKYG-FESDI 125
Query: 166 PLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRM 225
++N+ ++MY K V F + ++ S ++ G+ + ++ + Q+
Sbjct: 126 LISNAFVTMYMKTQSVENGWQFFKAMMIENLASRNNLLSGFCDTETCDQGPRILIQLLVE 185
Query: 226 SVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELA 285
P++ F++++ CA G+L ++H ++KSG N + L N LV++Y KCG A
Sbjct: 186 GFEPNMYTFISILKTCASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSANYA 245
Query: 286 RRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAEL 345
+VF + E+ V WT++I G+ GY S + +F ++L PN T + L +C+ L
Sbjct: 246 CKVFGEIPERDVVSWTALITGFVAEGYGS-GLRIFNQMLAEGFNPNMYTFISILRSCSSL 304
Query: 346 GSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMI 405
+ GK++ IV N L+ N V T+L+ M++K + A+ +F R+ +DL W+ ++
Sbjct: 305 SDVDLGKQVHAQIVKNSLDGNDFVGTALVDMYAKNRFLEDAETIFNRLIKRDLFAWTVIV 364
Query: 406 NGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFG 465
GYA G G++A+ F +MQ EG+KP+ S LS CS +D G SM G
Sbjct: 365 AGYAQDGQGEKAVKCFIQMQR-EGVKPNEFTLASSLSGCSRIATLDSGRQ-LHSMAIKAG 422
Query: 466 IEPSIEHYLCLVDLLGRAG 484
+ LVD+ + G
Sbjct: 423 QSGDMFVASALVDMYAKCG 441
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/258 (27%), Positives = 119/258 (46%), Gaps = 15/258 (5%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
++ +G E+ + + M + GV N FT L C+ I ++ G+++HS +K G
Sbjct: 363 IVAGYAQDGQGEKAVKCFIQMQREGVKPNEFTLASSLSGCSRIATLDSGRQLHSMAIKAG 422
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
D FV + L+DMY+KC + V D + R VSWN+II +S+ +A+
Sbjct: 423 QSGDMFVASALVDMYAKCGCVEDAEVVFDGLVS--RDTVSWNTIICGYSQHGQGGKALKA 480
Query: 121 LKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
+ M G TF+ V+S CS +G + K+ + I ++ +
Sbjct: 481 FEAMLDEGTVPDEVTFIGVLSACSHMGLIEEGKKHFNSLSKIYGITPTIEHYACMVDILG 540
Query: 177 KFGKVNEARSIFDEIGETS-IVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFL 235
+ GK +E S +E+ TS ++ W T++G GN+ FG M+ + P++
Sbjct: 541 RAGKFHEVESFIEEMKLTSNVLIWETVLGACKMHGNIE--FGERAAMKLFELEPEIDS-- 596
Query: 236 NLILGCAQVGNLFLALSM 253
N IL + N+F A M
Sbjct: 597 NYIL----LSNMFAAKGM 610
>gi|328774751|gb|AEB39775.1| pentatricopeptide repeat protein 71 [Funaria hygrometrica]
Length = 837
Score = 386 bits (992), Expect = e-104, Method: Compositional matrix adjust.
Identities = 204/611 (33%), Positives = 345/611 (56%), Gaps = 8/611 (1%)
Query: 9 GSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQ 68
G +E + + M+ + + TF +VL AC++ + GK H+ V+KVGF D +
Sbjct: 141 GHVKEAFALFRQMVDEAMEPSIITFLIVLDACSSPAGLKLGKEFHAQVIKVGFVSDFRIG 200
Query: 69 TGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLG 128
T L+ MY K +R+V D + R V ++N +I ++++ ++A + M G
Sbjct: 201 TALVSMYVKGGSMDGARQVFDGL--YKRDVSTFNVMIGGYAKSGDGEKAFQLFYRMQQEG 258
Query: 129 LELSASTFVSVVSGCSFRQ----GISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEA 184
+ + +F+S++ GCS + G ++H GL++ ++ +A +++ MY G + A
Sbjct: 259 FKPNRISFLSILDGCSTPEALAWGKAVHAQCMNTGLVD-DVRVATALIRMYMGCGSIEGA 317
Query: 185 RSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQV 244
R +FD++ +VSWT +I GY N+ +AFGL M+ + PD + ++++I CA
Sbjct: 318 RRVFDKMKVRDVVSWTVMIRGYAENSNIEDAFGLFATMQEEGIQPDRITYIHIINACASS 377
Query: 245 GNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMI 304
+L LA +HS ++++G+ + +D LV MY KCG ++ AR+VFDA+ + V W++MI
Sbjct: 378 ADLSLAREIHSQVVRAGFGTDLLVDTALVHMYAKCGAIKDARQVFDAMSRRDVVSWSAMI 437
Query: 305 GGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLE 364
G Y + G EA F + + +V P+ T L+AC LG+L G EI + L
Sbjct: 438 GAYVENGCGEEAFETFHLMKRNNVEPDVVTYINLLNACGHLGALDLGMEIYTQAIKADLV 497
Query: 365 SNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKM 424
S+ V +LI+M K G I +A+ +FE + +D+ W+ MI GY++HG +AL+LF +M
Sbjct: 498 SHIPVGNALINMNVKHGSIERARYIFENMVQRDVVTWNVMIGGYSLHGNAREALDLFDRM 557
Query: 425 QHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAG 484
E +P++V + +LSACS +G V++G FF + GI P++E Y C+VDLLGRAG
Sbjct: 558 LK-ERFRPNSVTFVGVLSACSRAGFVEEGRRFFSYLLDGRGIVPTMELYGCMVDLLGRAG 616
Query: 485 RFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMAN 544
D A I+ MP++ + +W+ LL+AC + N+++ E AA+ L P Y+ +++
Sbjct: 617 ELDEAELLINRMPLKPNSSIWSTLLAACRIYGNLDVAERAAERCLMSEPYDGAVYVQLSH 676
Query: 545 LFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKE 604
++ +AGMW+ A R +M+ R + KE G + +E++G + FV DRSH + +I L
Sbjct: 677 MYAAAGMWENVAKVRKVMESRGVRKEQGCTWIEVEGKLHTFVVEDRSHPQAGEIYAELAR 736
Query: 605 LHIKLLEAGYI 615
L + GYI
Sbjct: 737 LMTAIKREGYI 747
Score = 248 bits (633), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 133/435 (30%), Positives = 242/435 (55%), Gaps = 8/435 (1%)
Query: 27 HGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRK 86
H +S T+ + + C + GK+V H+++ G Q + + LI ++S C + + +R+
Sbjct: 58 HIDSRTYVKLFQRCMMLRDAGLGKQVRDHIIQSGRQLNIYELNTLIKLHSICGNMLEARQ 117
Query: 87 VLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCSFR 146
D V ++VV+WN+II+ +++ EA + ++M +E S TF+ V+ CS
Sbjct: 118 TFD--SVENKTVVTWNAIIAGYAQLGHVKEAFALFRQMVDEAMEPSIITFLIVLDACSSP 175
Query: 147 QGISM----HCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTI 202
G+ + H V K+G + ++ + +++SMY K G ++ AR +FD + + + ++ +
Sbjct: 176 AGLKLGKEFHAQVIKVGFV-SDFRIGTALVSMYVKGGSMDGARQVFDGLYKRDVSTFNVM 234
Query: 203 IGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGY 262
IGGY G+ +AF L +M++ P+ + FL+++ GC+ L ++H+ + +G
Sbjct: 235 IGGYAKSGDGEKAFQLFYRMQQEGFKPNRISFLSILDGCSTPEALAWGKAVHAQCMNTGL 294
Query: 263 NNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKR 322
++ + L+ MY CG +E ARRVFD + + V WT MI GYA+ +A LF
Sbjct: 295 VDDVRVATALIRMYMGCGSIEGARRVFDKMKVRDVVSWTVMIRGYAENSNIEDAFGLFAT 354
Query: 323 LLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGR 382
+ + ++P+ T ++ACA LS +EI +V G ++ V T+L+HM++KCG
Sbjct: 355 MQEEGIQPDRITYIHIINACASSADLSLAREIHSQVVRAGFGTDLLVDTALVHMYAKCGA 414
Query: 383 INKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILS 442
I A++VF+ + +D+ WSAMI Y +G G++A F+ M+ ++PD V Y ++L+
Sbjct: 415 IKDARQVFDAMSRRDVVSWSAMIGAYVENGCGEEAFETFHLMKR-NNVEPDVVTYINLLN 473
Query: 443 ACSHSGMVDDGLSFF 457
AC H G +D G+ +
Sbjct: 474 ACGHLGALDLGMEIY 488
Score = 227 bits (578), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 134/468 (28%), Positives = 238/468 (50%), Gaps = 11/468 (2%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI +G E+ + M Q G N +F +L C+ ++ GK VH+ + G
Sbjct: 234 MIGGYAKSGDGEKAFQLFYRMQQEGFKPNRISFLSILDGCSTPEALAWGKAVHAQCMNTG 293
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
D V T LI MY C +R+V D+M V R VVSW +I ++ ++A +
Sbjct: 294 LVDDVRVATALIRMYMGCGSIEGARRVFDKMKV--RDVVSWTVMIRGYAENSNIEDAFGL 351
Query: 121 LKEMWVLGLELSASTFVSVVSGCSFRQGISM----HCCVYKLGLLNNEIPLANSVMSMYA 176
M G++ T++ +++ C+ +S+ H V + G ++ + +++ MYA
Sbjct: 352 FATMQEEGIQPDRITYIHIINACASSADLSLAREIHSQVVRAG-FGTDLLVDTALVHMYA 410
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K G + +AR +FD + +VSW+ +IG YV G EAF + M+R +V PD+V ++N
Sbjct: 411 KCGAIKDARQVFDAMSRRDVVSWSAMIGAYVENGCGEEAFETFHLMKRNNVEPDVVTYIN 470
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
L+ C +G L L + +++ +K+ + P+ N L++M K G +E AR +F+ ++++
Sbjct: 471 LLNACGHLGALDLGMEIYTQAIKADLVSHIPVGNALINMNVKHGSIERARYIFENMVQRD 530
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEE 356
V W MIGGY+ G EA++LF R+LK RPN T LSAC+ G + +G+
Sbjct: 531 VVTWNVMIGGYSLHGNAREALDLFDRMLKERFRPNSVTFVGVLSACSRAGFVEEGRRFFS 590
Query: 357 YIVL-NGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDK-DLAVWSAMINGYAIHGMG 414
Y++ G+ ++ ++ + + G +++A+ + R+P K + ++WS ++ I+G
Sbjct: 591 YLLDGRGIVPTMELYGCMVDLLGRAGELDEAELLINRMPLKPNSSIWSTLLAACRIYGNL 650
Query: 415 DQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQS 462
D A + E D VY + + +GM ++ K M+S
Sbjct: 651 DVAERAAERCLMSEPY--DGAVYVQLSHMYAAAGMWENVAKVRKVMES 696
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 122/400 (30%), Positives = 201/400 (50%), Gaps = 27/400 (6%)
Query: 169 NSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVT 228
N+++ +++ G + EAR FD + ++V+W II GY +G+V EAF L QM ++
Sbjct: 100 NTLIKLHSICGNMLEARQTFDSVENKTVVTWNAIIAGYAQLGHVKEAFALFRQMVDEAME 159
Query: 229 PDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRV 288
P ++ FL ++ C+ L L H+ ++K G+ ++ + LVSMY K G ++ AR+V
Sbjct: 160 PSIITFLIVLDACSSPAGLKLGKEFHAQVIKVGFVSDFRIGTALVSMYVKGGSMDGARQV 219
Query: 289 FDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSL 348
FD + ++ V + MIGGYA+ G +A LF R+ + +PN + + L C+ +L
Sbjct: 220 FDGLYKRDVSTFNVMIGGYAKSGDGEKAFQLFYRMQQEGFKPNRISFLSILDGCSTPEAL 279
Query: 349 SKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGY 408
+ GK + + GL + +V T+LI M+ CG I A+ VF+++ +D+ W+ MI GY
Sbjct: 280 AWGKAVHAQCMNTGLVDDVRVATALIRMYMGCGSIEGARRVFDKMKVRDVVSWTVMIRGY 339
Query: 409 AIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSN----- 463
A + + A LF MQ EG++PD + Y I++AC+ S LS + + S
Sbjct: 340 AENSNIEDAFGLFATMQE-EGIQPDRITYIHIINACASSA----DLSLAREIHSQVVRAG 394
Query: 464 FGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMP----VEVQAQVWAPLLSAC------- 512
FG + ++ LV + + G A + M V A + A + + C
Sbjct: 395 FGTDLLVD--TALVHMYAKCGAIKDARQVFDAMSRRDVVSWSAMIGAYVENGCGEEAFET 452
Query: 513 ---MKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSA 549
MK +NVE NLL G G L ++T A
Sbjct: 453 FHLMKRNNVEPDVVTYINLLNA-CGHLGALDLGMEIYTQA 491
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 70/141 (49%), Gaps = 1/141 (0%)
Query: 316 AVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIH 375
A ++ RL + S + T C L GK++ ++I+ +G + N +LI
Sbjct: 45 ANDVLHRLGEGSNHIDSRTYVKLFQRCMMLRDAGLGKQVRDHIIQSGRQLNIYELNTLIK 104
Query: 376 MFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAV 435
+ S CG + +A++ F+ V +K + W+A+I GYA G +A LF +M E ++P +
Sbjct: 105 LHSICGNMLEARQTFDSVENKTVVTWNAIIAGYAQLGHVKEAFALFRQMVD-EAMEPSII 163
Query: 436 VYTSILSACSHSGMVDDGLSF 456
+ +L ACS + G F
Sbjct: 164 TFLIVLDACSSPAGLKLGKEF 184
>gi|224123788|ref|XP_002319164.1| predicted protein [Populus trichocarpa]
gi|222857540|gb|EEE95087.1| predicted protein [Populus trichocarpa]
Length = 989
Score = 386 bits (992), Expect = e-104, Method: Compositional matrix adjust.
Identities = 209/621 (33%), Positives = 340/621 (54%), Gaps = 8/621 (1%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+I G + L ++ M + + + T +L ACA+ ++ G+++HS+V+K G
Sbjct: 285 LISGLAQQGFSDGALELFTKMKRDYLKPDCVTVASLLSACASNGALCKGEQLHSYVIKAG 344
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
D V+ L+D+Y CSD ++ ++ + + +VV WN ++ A + E+ +
Sbjct: 345 ISSDMIVEGALLDLYVNCSDIKTAHEMF--LTAQTENVVLWNVMLVAFGKLDNLSESFRI 402
Query: 121 LKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
++M + GL + T+ S++ C+ G +H V K G N + + + ++ MYA
Sbjct: 403 FRQMQIKGLIPNQFTYPSILRTCTSVGALDLGEQIHTQVIKTGFQFN-VYVCSVLIDMYA 461
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K GK++ A I + E +VSWT +I GY EA +M + D + F +
Sbjct: 462 KHGKLDTAHVILRTLTEDDVVSWTALISGYAQHNLFAEALKHFKEMLNRGIQSDNIGFSS 521
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
I CA + L +H+ SGY+ + + N LVS+Y +CG ++ A F+ + K
Sbjct: 522 AISACAGIQALNQGRQIHAQSYVSGYSEDLSIGNALVSLYARCGRIKEAYLEFEKIDAKD 581
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEE 356
W +I G+AQ GY +A+ +F ++ + + + T + +SA A + ++ +GK+I
Sbjct: 582 SISWNGLISGFAQSGYCEDALKVFAQMNRAKLEASFFTFGSAVSAAANIANIKQGKQIHA 641
Query: 357 YIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQ 416
I+ G +S+ +V +LI ++KCG I A+ F +P+K+ W+AMI GY+ HG G++
Sbjct: 642 MIIKRGFDSDIEVSNALITFYAKCGSIEDARREFCEMPEKNDVSWNAMITGYSQHGYGNE 701
Query: 417 ALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCL 476
A+NLF KM+ V G P+ V + +LSACSH G+V GL +F+SM G+ P HY C+
Sbjct: 702 AVNLFEKMKQV-GEMPNHVTFVGVLSACSHVGLVTKGLGYFESMSKEHGLVPKPAHYACV 760
Query: 477 VDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGST 536
VDL+ RAG A K I EMP+E A +W LLSAC H NVE+GE+AA++LL L P +
Sbjct: 761 VDLISRAGFLSRARKFIEEMPIEPDATIWRTLLSACTVHKNVEVGEFAAQHLLELEPEDS 820
Query: 537 GNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSV 596
Y+L++N++ +G W R +M +R + KEPG S +E+ SV F GDR H L+
Sbjct: 821 ATYVLLSNMYAVSGKWDCRDQTRQMMRNRGVKKEPGRSWIEVKNSVHAFYVGDRLHPLAD 880
Query: 597 DIRKTLKELHIKLLEAGYIAE 617
I + L EL+ K E GY +
Sbjct: 881 KIYEFLAELNKKAAEIGYFQD 901
Score = 215 bits (548), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 142/506 (28%), Positives = 257/506 (50%), Gaps = 21/506 (4%)
Query: 21 MLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSD 80
M G+ N T+ +L C N S+ + K++H +LK+GF ++ + L+D+Y D
Sbjct: 1 MEHRGICANCQTYIWLLDLCLNSGSLVECKKLHGKILKLGFGNESVLCNKLVDVYFALGD 60
Query: 81 FVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVV 140
KV ++MP R SV SW+ IIS +++ + + M + + +F SV+
Sbjct: 61 LDGVVKVFEDMPNR--SVRSWDKIISGFMEKKMSNRVLDLFSCMIEENVSPTEISFASVL 118
Query: 141 SGCS-----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETS 195
CS R +H + GLL + I ++N ++ +YAK G + AR +FD +
Sbjct: 119 RACSGHRIGIRYAEQIHARIICHGLLCSPI-ISNPLIGLYAKNGLIISARKVFDNLCTKD 177
Query: 196 IVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHS 255
VSW +I G+ G EA L +M + P VF +++ GC ++ + +H+
Sbjct: 178 SVSWVAMISGFSQNGYEEEAIHLFCEMHTAGIFPTPYVFSSVLSGCTKIKLFDVGEQLHA 237
Query: 256 LLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSE 315
L+ K G + E + N LV++Y++ + A +VF + K + S+I G AQ G+
Sbjct: 238 LVFKYGSSLETYVCNALVTLYSRMPNFVSAEKVFSKMQSKDEVSFNSLISGLAQQGFSDG 297
Query: 316 AVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIH 375
A+ LF ++ + ++P+ T+A+ LSACA G+L KG+++ Y++ G+ S+ V+ +L+
Sbjct: 298 ALELFTKMKRDYLKPDCVTVASLLSACASNGALCKGEQLHSYVIKAGISSDMIVEGALLD 357
Query: 376 MFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAV 435
++ C I A E+F +++ +W+ M+ + ++ +F +MQ ++GL P+
Sbjct: 358 LYVNCSDIKTAHEMFLTAQTENVVLWNVMLVAFGKLDNLSESFRIFRQMQ-IKGLIPNQF 416
Query: 436 VYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLC--LVDLLGRAGRFDLA---L 490
Y SIL C+ G +D G + G + ++ Y+C L+D+ + G+ D A L
Sbjct: 417 TYPSILRTCTSVGALDLGEQIHTQVIKT-GFQFNV--YVCSVLIDMYAKHGKLDTAHVIL 473
Query: 491 KTIHEMPVEVQAQVWAPLLSACMKHH 516
+T+ E V W L+S +H+
Sbjct: 474 RTLTEDDV----VSWTALISGYAQHN 495
Score = 211 bits (536), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 132/519 (25%), Positives = 261/519 (50%), Gaps = 10/519 (1%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI + NG EE + + M G+ + F VL C I G+++H+ V K G
Sbjct: 184 MISGFSQNGYEEEAIHLFCEMHTAGIFPTPYVFSSVLSGCTKIKLFDVGEQLHALVFKYG 243
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+ +V L+ +YS+ +FVS+ KV +M + + VS+NS+IS ++ +D A+ +
Sbjct: 244 SSLETYVCNALVTLYSRMPNFVSAEKVFSKM--QSKDEVSFNSLISGLAQQGFSDGALEL 301
Query: 121 LKEMWVLGLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
+M L+ T S++S C + +G +H V K G +++++ + +++ +Y
Sbjct: 302 FTKMKRDYLKPDCVTVASLLSACASNGALCKGEQLHSYVIKAG-ISSDMIVEGALLDLYV 360
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
+ A +F ++V W ++ + + N++E+F + QM+ + P+ + +
Sbjct: 361 NCSDIKTAHEMFLTAQTENVVLWNVMLVAFGKLDNLSESFRIFRQMQIKGLIPNQFTYPS 420
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
++ C VG L L +H+ ++K+G+ + ++L+ MY K G L+ A + + E
Sbjct: 421 ILRTCTSVGALDLGEQIHTQVIKTGFQFNVYVCSVLIDMYAKHGKLDTAHVILRTLTEDD 480
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEE 356
V WT++I GYAQ +EA+ FK +L ++ + ++ +SACA + +L++G++I
Sbjct: 481 VVSWTALISGYAQHNLFAEALKHFKEMLNRGIQSDNIGFSSAISACAGIQALNQGRQIHA 540
Query: 357 YIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQ 416
++G + + +L+ ++++CGRI +A FE++ KD W+ +I+G+A G +
Sbjct: 541 QSYVSGYSEDLSIGNALVSLYARCGRIKEAYLEFEKIDAKDSISWNGLISGFAQSGYCED 600
Query: 417 ALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCL 476
AL +F +M + L+ + S +SA ++ + G +M G + IE L
Sbjct: 601 ALKVFAQMNRAK-LEASFFTFGSAVSAAANIANIKQGKQ-IHAMIIKRGFDSDIEVSNAL 658
Query: 477 VDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKH 515
+ + G + A + EMP E W +++ +H
Sbjct: 659 ITFYAKCGSIEDARREFCEMP-EKNDVSWNAMITGYSQH 696
Score = 205 bits (522), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 133/481 (27%), Positives = 248/481 (51%), Gaps = 12/481 (2%)
Query: 15 LSTYSSMLQTGVHGNSFTFPLVLKACANIN-SIWDGKRVHSHVLKVGFQQDAFVQTGLID 73
L +S M++ V +F VL+AC+ I +++H+ ++ G + LI
Sbjct: 96 LDLFSCMIEENVSPTEISFASVLRACSGHRIGIRYAEQIHARIICHGLLCSPIISNPLIG 155
Query: 74 MYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSA 133
+Y+K +S+RKV D + + VSW ++IS S+ +EAI + EM G+ +
Sbjct: 156 LYAKNGLIISARKVFDNLCTK--DSVSWVAMISGFSQNGYEEEAIHLFCEMHTAGIFPTP 213
Query: 134 STFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFD 189
F SV+SGC+ F G +H V+K G + E + N+++++Y++ A +F
Sbjct: 214 YVFSSVLSGCTKIKLFDVGEQLHALVFKYGS-SLETYVCNALVTLYSRMPNFVSAEKVFS 272
Query: 190 EIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFL 249
++ VS+ ++I G G + A L +M+R + PD V +L+ CA G L
Sbjct: 273 KMQSKDEVSFNSLISGLAQQGFSDGALELFTKMKRDYLKPDCVTVASLLSACASNGALCK 332
Query: 250 ALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQ 309
+HS ++K+G +++ ++ L+ +Y C D++ A +F ++V LW M+ + +
Sbjct: 333 GEQLHSYVIKAGISSDMIVEGALLDLYVNCSDIKTAHEMFLTAQTENVVLWNVMLVAFGK 392
Query: 310 LGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQV 369
L SE+ +F+++ + PN+ T + L C +G+L G++I ++ G + N V
Sbjct: 393 LDNLSESFRIFRQMQIKGLIPNQFTYPSILRTCTSVGALDLGEQIHTQVIKTGFQFNVYV 452
Query: 370 QTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEG 429
+ LI M++K G+++ A + + + D+ W+A+I+GYA H + +AL F +M + G
Sbjct: 453 CSVLIDMYAKHGKLDTAHVILRTLTEDDVVSWTALISGYAQHNLFAEALKHFKEMLN-RG 511
Query: 430 LKPDAVVYTSILSACSHSGMVDDGLSFF-KSMQSNFGIEPSIEHYLCLVDLLGRAGRFDL 488
++ D + ++S +SAC+ ++ G +S S + + SI + LV L R GR
Sbjct: 512 IQSDNIGFSSAISACAGIQALNQGRQIHAQSYVSGYSEDLSIGN--ALVSLYARCGRIKE 569
Query: 489 A 489
A
Sbjct: 570 A 570
>gi|357495039|ref|XP_003617808.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355519143|gb|AET00767.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 811
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 206/620 (33%), Positives = 350/620 (56%), Gaps = 8/620 (1%)
Query: 6 TNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDA 65
+ + F + L + + G N F F +LK +++ +H+ V K+G DA
Sbjct: 112 SRDHQFHQALHFILRIFKEGHEVNPFVFTTLLKLLVSMDLAHLCWTLHACVYKLGHHADA 171
Query: 66 FVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMW 125
FV T LID YS + +R V D++ + +VSW +++ ++ C +E++ + +M
Sbjct: 172 FVGTALIDAYSVRGNVDVARHVFDDICCK--DMVSWTGMVACYAENCFYEESLQLFNQMR 229
Query: 126 VLGLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKV 181
++G + + T + C +F G S+H C K G ++++ + +++ +YAK G++
Sbjct: 230 IMGYKPNNFTISGALKSCLGLEAFNVGKSVHGCALK-GCYDHDLFVGIALLELYAKSGEI 288
Query: 182 NEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGC 241
+A+ +F+E+ +T ++ W+ +I Y EA L +MR+ SV P+ F +++ C
Sbjct: 289 IDAQRLFEEMPKTDLIPWSLMIARYAQSDRSKEALDLFLRMRQTSVVPNNFTFASVLQAC 348
Query: 242 AQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWT 301
A +L L +HS +LK G N+ + N ++ +Y KCG++E + ++F+ + +++ W
Sbjct: 349 ASSVSLDLGKQIHSCVLKFGLNSNVFVSNAIMDVYAKCGEIENSMKLFEELPDRNDVTWN 408
Query: 302 SMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLN 361
++I GY QLG A+NLF +L+ ++P E T ++ L A A L +L G +I +
Sbjct: 409 TIIVGYVQLGDGERAMNLFTHMLEHDMQPTEVTYSSVLRASASLAALEPGLQIHSLTIKT 468
Query: 362 GLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLF 421
+ V SLI M++KCGRIN A+ F+++ +D W+AMI GY++HGM +ALNLF
Sbjct: 469 MYNKDTVVANSLIDMYAKCGRINDARLTFDKMNKRDEVSWNAMICGYSMHGMSMEALNLF 528
Query: 422 YKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLG 481
MQH + KP+ + + +LSACS++G++ G + F+SM ++ I+P IEHY C+V LLG
Sbjct: 529 DMMQHTD-CKPNKLTFVGVLSACSNAGLLYKGQAHFESMSKDYDIKPCIEHYTCMVWLLG 587
Query: 482 RAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYIL 541
R GRFD A+K I E+ + VW LL AC+ H V+LG A+++L + P ++L
Sbjct: 588 RLGRFDEAMKLIGEIAYQPSVMVWRALLGACVIHKKVDLGRVCAQHVLEMEPHDDATHVL 647
Query: 542 MANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKT 601
++N++ +AG W A R M +++ KEPG S VE G V F GD SH I
Sbjct: 648 LSNMYATAGRWDNVAFVRKYMQKKKVRKEPGLSWVENQGVVHYFSVGDTSHPDIKLICAM 707
Query: 602 LKELHIKLLEAGYIAEADIV 621
L+ L+ K +AGY+ + + V
Sbjct: 708 LEWLNKKTRDAGYVPDCNAV 727
Score = 207 bits (528), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 133/453 (29%), Positives = 237/453 (52%), Gaps = 11/453 (2%)
Query: 49 GKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAH 108
GK +H H+LK G D F Q L++ Y + + + K+ DEMP + +S+ ++ +
Sbjct: 54 GKHLHCHILKRGTSLDLFAQNILLNFYVQSNSLQDASKLFDEMPQ--TNTISFVTLAQGY 111
Query: 109 SRACLNDEAILVLKEMWVLGLELSASTFVS----VVSGCSFRQGISMHCCVYKLGLLNNE 164
SR +A+ + ++ G E++ F + +VS ++H CVYKLG + +
Sbjct: 112 SRDHQFHQALHFILRIFKEGHEVNPFVFTTLLKLLVSMDLAHLCWTLHACVYKLG-HHAD 170
Query: 165 IPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRR 224
+ +++ Y+ G V+ AR +FD+I +VSWT ++ Y E+ L NQMR
Sbjct: 171 AFVGTALIDAYSVRGNVDVARHVFDDICCKDMVSWTGMVACYAENCFYEESLQLFNQMRI 230
Query: 225 MSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLEL 284
M P+ + C + + S+H LK Y+++ + L+ +Y K G++
Sbjct: 231 MGYKPNNFTISGALKSCLGLEAFNVGKSVHGCALKGCYDHDLFVGIALLELYAKSGEIID 290
Query: 285 ARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAE 344
A+R+F+ + + + W+ MI YAQ EA++LF R+ +TSV PN T A+ L ACA
Sbjct: 291 AQRLFEEMPKTDLIPWSLMIARYAQSDRSKEALDLFLRMRQTSVVPNNFTFASVLQACAS 350
Query: 345 LGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAM 404
SL GK+I ++ GL SN V +++ +++KCG I + ++FE +PD++ W+ +
Sbjct: 351 SVSLDLGKQIHSCVLKFGLNSNVFVSNAIMDVYAKCGEIENSMKLFEELPDRNDVTWNTI 410
Query: 405 INGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFK-SMQSN 463
I GY G G++A+NLF M ++P V Y+S+L A + ++ GL ++++
Sbjct: 411 IVGYVQLGDGERAMNLFTHMLE-HDMQPTEVTYSSVLRASASLAALEPGLQIHSLTIKTM 469
Query: 464 FGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEM 496
+ + + + L+D+ + GR + A T +M
Sbjct: 470 YNKDTVVAN--SLIDMYAKCGRINDARLTFDKM 500
Score = 207 bits (527), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 125/421 (29%), Positives = 219/421 (52%), Gaps = 9/421 (2%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
M+ N +EE+L ++ M G N+FT LK+C + + GK VH LK
Sbjct: 208 MVACYAENCFYEESLQLFNQMRIMGYKPNNFTISGALKSCLGLEAFNVGKSVHGCALKGC 267
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+ D FV L+++Y+K + + ++++ +EMP ++ W+ +I+ ++++ + EA+ +
Sbjct: 268 YDHDLFVGIALLELYAKSGEIIDAQRLFEEMPK--TDLIPWSLMIARYAQSDRSKEALDL 325
Query: 121 LKEMWVLGLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
M + + TF SV+ C S G +H CV K G LN+ + ++N++M +YA
Sbjct: 326 FLRMRQTSVVPNNFTFASVLQACASSVSLDLGKQIHSCVLKFG-LNSNVFVSNAIMDVYA 384
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K G++ + +F+E+ + + V+W TII GYV +G+ A L M + P V + +
Sbjct: 385 KCGEIENSMKLFEELPDRNDVTWNTIIVGYVQLGDGERAMNLFTHMLEHDMQPTEVTYSS 444
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
++ A + L L +HSL +K+ YN + + N L+ MY KCG + AR FD + ++
Sbjct: 445 VLRASASLAALEPGLQIHSLTIKTMYNKDTVVANSLIDMYAKCGRINDARLTFDKMNKRD 504
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEE 356
W +MI GY+ G EA+NLF + T +PN+ T LSAC+ G L KG+ E
Sbjct: 505 EVSWNAMICGYSMHGMSMEALNLFDMMQHTDCKPNKLTFVGVLSACSNAGLLYKGQAHFE 564
Query: 357 YIVLN-GLESNRQVQTSLIHMFSKCGRINKA-KEVFERVPDKDLAVWSAMINGYAIHGMG 414
+ + ++ + T ++ + + GR ++A K + E + VW A++ IH
Sbjct: 565 SMSKDYDIKPCIEHYTCMVWLLGRLGRFDEAMKLIGEIAYQPSVMVWRALLGACVIHKKV 624
Query: 415 D 415
D
Sbjct: 625 D 625
>gi|224070863|ref|XP_002303270.1| predicted protein [Populus trichocarpa]
gi|222840702|gb|EEE78249.1| predicted protein [Populus trichocarpa]
Length = 805
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 217/615 (35%), Positives = 338/615 (54%), Gaps = 14/615 (2%)
Query: 6 TNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDA 65
T G F+E L Y +L G+ + +TFP VL++CA + G+ VH+HV++ F D
Sbjct: 111 TKAGFFDEALCLYHRILWAGIRPDVYTFPSVLRSCAGAMDLVRGREVHAHVVRFDFDMDV 170
Query: 66 FVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAH--SRACLNDEAILVLKE 123
V LI MY KC D VS+R + D+MP R R +SWN++IS + + CL E + +
Sbjct: 171 DVVNALITMYVKCGDVVSARMLFDKMPTRDR--ISWNAMISGYFENDECL--EGLELFFR 226
Query: 124 MWVLGLELSASTFVSVVSGCSF----RQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFG 179
M L ++ T SV+S C R G +H V + N I + NS++ MY G
Sbjct: 227 MRELSIDPDLMTMTSVISACELLGDERLGTQLHSYVVRTAYDGN-ISVYNSLIQMYLSVG 285
Query: 180 KVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLIL 239
EA S+F + +VSWTTII G V+ ++A M PD V +++
Sbjct: 286 HWKEAESVFSGMECRDVVSWTTIISGCVDNLLPDKALETYKTMEITGTMPDEVTIASVLS 345
Query: 240 GCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFL 299
CA +G L + + +H L ++G+ + N L+ MY+KC +E A +F + +K V
Sbjct: 346 ACASLGQLDMGMKLHELAERTGHILYVVVANSLIDMYSKCKRIEKALEIFHQIPDKDVIS 405
Query: 300 WTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIV 359
WTS+I G EA+ F++++ S +PN TL + LSACA +G+L GKEI + +
Sbjct: 406 WTSVINGLRINNRCFEALIFFRKMILKS-KPNSVTLISALSACARVGALMCGKEIHAHAL 464
Query: 360 LNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALN 419
G+ + + +++ ++ +CGR+ A F + +KD+ W+ ++ GYA G G +
Sbjct: 465 KAGMGFDGFLPNAILDLYVRCGRMRTALNQFN-LNEKDVGAWNILLTGYAQKGKGAMVME 523
Query: 420 LFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDL 479
LF +M E + PD V + S+L ACS SGMV +GL +F+ M+ N+ I P+++HY C+VDL
Sbjct: 524 LFKRMVESE-INPDDVTFISLLCACSRSGMVTEGLEYFQRMKVNYHITPNLKHYACVVDL 582
Query: 480 LGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNY 539
LGRAG+ + A + I MP++ +W LL+AC H +V LGE AA+++ + S G Y
Sbjct: 583 LGRAGKLNEAHEFIERMPIKPDPAIWGALLNACRIHRHVLLGELAAQHIFKQDAESIGYY 642
Query: 540 ILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIR 599
IL+ NL+ +G W E A R M + L +PG S VE+ G V F++GD H +I
Sbjct: 643 ILLCNLYADSGKWDEVAKVRRTMKEEGLIVDPGCSWVEVKGKVHAFLSGDNFHPQMQEIN 702
Query: 600 KTLKELHIKLLEAGY 614
L+ + K+ +G+
Sbjct: 703 VVLEGFYEKMKTSGF 717
Score = 213 bits (542), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 147/510 (28%), Positives = 250/510 (49%), Gaps = 15/510 (2%)
Query: 8 NGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLK-VGFQQDAF 66
+G+ E+ L +SM + + F +++ C N +G+ V VL +
Sbjct: 11 SGNLEQALKHLASMQEVKIPVEEDCFVALIRLCENKRGYSEGEYVWKAVLSSLVTLLSVR 70
Query: 67 VQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWV 126
+ L+ M+ + D ++ V M R + SWN ++ +++A DEA+ + +
Sbjct: 71 LGNALLSMFVRFGDVGNAWNVFGRMGER--DLFSWNVLVGGYTKAGFFDEALCLYHRILW 128
Query: 127 LGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVN 182
G+ TF SV+ C+ +G +H V + + ++ + N++++MY K G V
Sbjct: 129 AGIRPDVYTFPSVLRSCAGAMDLVRGREVHAHVVRFDF-DMDVDVVNALITMYVKCGDVV 187
Query: 183 EARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCA 242
AR +FD++ +SW +I GY E L +MR +S+ PDL+ ++I C
Sbjct: 188 SARMLFDKMPTRDRISWNAMISGYFENDECLEGLELFFRMRELSIDPDLMTMTSVISACE 247
Query: 243 QVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTS 302
+G+ L +HS ++++ Y+ + N L+ MY G + A VF + + V WT+
Sbjct: 248 LLGDERLGTQLHSYVVRTAYDGNISVYNSLIQMYLSVGHWKEAESVFSGMECRDVVSWTT 307
Query: 303 MIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNG 362
+I G P +A+ +K + T P+E T+A+ LSACA LG L G ++ E G
Sbjct: 308 IISGCVDNLLPDKALETYKTMEITGTMPDEVTIASVLSACASLGQLDMGMKLHELAERTG 367
Query: 363 LESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFY 422
V SLI M+SKC RI KA E+F ++PDKD+ W+++ING I+ +AL F
Sbjct: 368 HILYVVVANSLIDMYSKCKRIEKALEIFHQIPDKDVISWTSVINGLRINNRCFEALIFFR 427
Query: 423 KMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFF-KSMQSNFGIEPSIEHYLCLVDLLG 481
KM + KP++V S LSAC+ G + G ++++ G + + + ++DL
Sbjct: 428 KM--ILKSKPNSVTLISALSACARVGALMCGKEIHAHALKAGMGFDGFLPN--AILDLYV 483
Query: 482 RAGRFDLALKTIHEMPVEVQAQVWAPLLSA 511
R GR AL + +V A W LL+
Sbjct: 484 RCGRMRTALNQFNLNEKDVGA--WNILLTG 511
>gi|225438593|ref|XP_002276456.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19191,
mitochondrial [Vitis vinifera]
gi|296082485|emb|CBI21490.3| unnamed protein product [Vitis vinifera]
Length = 637
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 211/615 (34%), Positives = 341/615 (55%), Gaps = 8/615 (1%)
Query: 2 IRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGF 61
I S N G + L + M Q G+ N+ TFP V KAC+ + ++ + VH+HV+K F
Sbjct: 26 ITESVNQGYAHKALLLFRQMKQNGLEPNNLTFPSVAKACSKLLNLKYSQIVHTHVVKSRF 85
Query: 62 QQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVL 121
Q D FVQT ++DMY KCS + + MP R V SWNS+I ++ D + +
Sbjct: 86 QADLFVQTSVVDMYVKCSQLGFAYNLFSRMPKR--DVASWNSMILGFAQLGFVDRVVSLF 143
Query: 122 KEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGL---LNNEIPLANSVMSMYAKF 178
EM + G+ + T + + + + M ++ G+ ++ ++ ++N+ ++ YAK
Sbjct: 144 CEMGIEGIRADSVTVIGLTHSALSLKDLKMLESIHSFGIKIGIDTDVSVSNTWIAAYAKC 203
Query: 179 GKVNEARSIFDEI--GETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
G+ A ++FD I G + VSW ++I GY + ++A G +M DL L+
Sbjct: 204 GEFGLAETVFDGIDKGLKTGVSWNSMIAGYAHFEQCSKAVGFFKKMLCGGFRADLSTILS 263
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
L+ C Q LF +H+ ++ G +++ + N L+SMY+KCGD+ AR +FD +L K+
Sbjct: 264 LLSSCVQPEVLFHGKLIHAHGIQVGCDSDIQVINTLISMYSKCGDIGSARYLFDNMLGKT 323
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEE 356
WT+MI GYA+ G EA+ LF + +P+ T+ + +S C + G+L GK I+
Sbjct: 324 RVSWTAMIAGYAEKGDLDEAMTLFSAMEAVGEKPDLVTIISLMSGCGQTGALELGKWIDT 383
Query: 357 YIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQ 416
Y NGL+ N V +LI +++KCG ++ A+E+F +P+K L W+ +I G A++G +
Sbjct: 384 YATANGLKDNLMVCNALIDVYAKCGSMDNARELFYTMPEKSLVSWTTLIAGCALNGEFKE 443
Query: 417 ALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCL 476
AL LF++M + GLKP+ + + ++L AC+H+G ++ G F M + I P ++HY C+
Sbjct: 444 ALGLFFQMVEL-GLKPNHITFLAVLQACNHAGFLEKGWECFNLMTKVYKINPGLDHYSCM 502
Query: 477 VDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGST 536
DLLGR GR A + I MP + +W+ LLSAC H NV +GE A +L L P +
Sbjct: 503 ADLLGRKGRLKEAFEFIQNMPFKPDVGIWSVLLSACKIHQNVVIGECVAYHLFELEPQTA 562
Query: 537 GNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSV 596
Y+ MAN++ SAG W A R +M + K PG S V+++G F DR H +
Sbjct: 563 VPYVQMANIYASAGKWDRVAAIRTMMKCNKAMKSPGKSLVQVNGKTHEFTVEDRCHPEGL 622
Query: 597 DIRKTLKELHIKLLE 611
I +TL+ L +++ E
Sbjct: 623 LIYETLENLALQMKE 637
Score = 185 bits (470), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 128/426 (30%), Positives = 214/426 (50%), Gaps = 14/426 (3%)
Query: 95 LRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCS------FRQG 148
L +V WNS I+ +A+L+ ++M GLE + TF SV CS + Q
Sbjct: 16 LWTVAQWNSSITESVNQGYAHKALLLFRQMKQNGLEPNNLTFPSVAKACSKLLNLKYSQI 75
Query: 149 ISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVN 208
+ H + ++ + SV+ MY K ++ A ++F + + + SW ++I G+
Sbjct: 76 VHTHVVKSR---FQADLFVQTSVVDMYVKCSQLGFAYNLFSRMPKRDVASWNSMILGFAQ 132
Query: 209 VGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPL 268
+G V+ L +M + D V + L + +L + S+HS +K G + + +
Sbjct: 133 LGFVDRVVSLFCEMGIEGIRADSVTVIGLTHSALSLKDLKMLESIHSFGIKIGIDTDVSV 192
Query: 269 DNLLVSMYTKCGDLELARRVFDAVLE--KSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKT 326
N ++ Y KCG+ LA VFD + + K+ W SMI GYA S+AV FK++L
Sbjct: 193 SNTWIAAYAKCGEFGLAETVFDGIDKGLKTGVSWNSMIAGYAHFEQCSKAVGFFKKMLCG 252
Query: 327 SVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKA 386
R + +T+ + LS+C + L GK I + + G +S+ QV +LI M+SKCG I A
Sbjct: 253 GFRADLSTILSLLSSCVQPEVLFHGKLIHAHGIQVGCDSDIQVINTLISMYSKCGDIGSA 312
Query: 387 KEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSH 446
+ +F+ + K W+AMI GYA G D+A+ LF M+ V G KPD V S++S C
Sbjct: 313 RYLFDNMLGKTRVSWTAMIAGYAEKGDLDEAMTLFSAMEAV-GEKPDLVTIISLMSGCGQ 371
Query: 447 SGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWA 506
+G ++ G + + + G++ ++ L+D+ + G D A + + MP E W
Sbjct: 372 TGALELG-KWIDTYATANGLKDNLMVCNALIDVYAKCGSMDNARELFYTMP-EKSLVSWT 429
Query: 507 PLLSAC 512
L++ C
Sbjct: 430 TLIAGC 435
Score = 179 bits (454), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 122/421 (28%), Positives = 213/421 (50%), Gaps = 15/421 (3%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI G + +S + M G+ +S T + + ++ + + +HS +K+G
Sbjct: 126 MILGFAQLGFVDRVVSLFCEMGIEGIRADSVTVIGLTHSALSLKDLKMLESIHSFGIKIG 185
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
D V I Y+KC +F + V D + L++ VSWNS+I+ ++ +A+
Sbjct: 186 IDTDVSVSNTWIAAYAKCGEFGLAETVFDGIDKGLKTGVSWNSMIAGYAHFEQCSKAVGF 245
Query: 121 LKEMWVLGLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
K+M G ST +S++S C G +H ++G +++I + N+++SMY+
Sbjct: 246 FKKMLCGGFRADLSTILSLLSSCVQPEVLFHGKLIHAHGIQVG-CDSDIQVINTLISMYS 304
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K G + AR +FD + + VSWT +I GY G+++EA L + M + PDLV ++
Sbjct: 305 KCGDIGSARYLFDNMLGKTRVSWTAMIAGYAEKGDLDEAMTLFSAMEAVGEKPDLVTIIS 364
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
L+ GC Q G L L + + +G + + N L+ +Y KCG ++ AR +F + EKS
Sbjct: 365 LMSGCGQTGALELGKWIDTYATANGLKDNLMVCNALIDVYAKCGSMDNARELFYTMPEKS 424
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKE--- 353
+ WT++I G A G EA+ LF ++++ ++PN T L AC G L KG E
Sbjct: 425 LVSWTTLIAGCALNGEFKEALGLFFQMVELGLKPNHITFLAVLQACNHAGFLEKGWECFN 484
Query: 354 --IEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDK-DLAVWSAMINGYAI 410
+ Y + GL+ + + + + GR+ +A E + +P K D+ +WS +++ I
Sbjct: 485 LMTKVYKINPGLDH----YSCMADLLGRKGRLKEAFEFIQNMPFKPDVGIWSVLLSACKI 540
Query: 411 H 411
H
Sbjct: 541 H 541
>gi|356566136|ref|XP_003551291.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g47840-like [Glycine max]
Length = 733
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 213/610 (34%), Positives = 329/610 (53%), Gaps = 9/610 (1%)
Query: 1 MIRNSTNNGSFEETLSTYSSM-LQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKV 59
+I N E L +S+M + G + F + LKACA +I G+ +H +K
Sbjct: 94 LIAGYVNASDSYEALILFSNMWVHPGPQRDQFMISVALKACALGVNICFGELLHGFSVKS 153
Query: 60 GFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAIL 119
G FV + LIDMY K +V ++M R +VVSW +II+ A N E +L
Sbjct: 154 GLIHSVFVSSALIDMYMKVGKIEQGCRVFEKMMTR--NVVSWTAIIAGLVHAGYNMEGLL 211
Query: 120 VLKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMY 175
EMW + + TF + + G ++H K G + + N++ +MY
Sbjct: 212 YFSEMWRSKVGYDSHTFAIALKASADSSLLHHGKAIHTQTIKQGFDESSFVI-NTLATMY 270
Query: 176 AKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFL 235
K GK + +F+++ +VSWTT+I YV +G A +MR+ V+P+ F
Sbjct: 271 NKCGKPDYVMRLFEKMRMPDVVSWTTLISTYVQMGEEEHAVEAFKRMRKSYVSPNKYTFA 330
Query: 236 NLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEK 295
+I CA + +H +L+ G N + N ++++Y+KCG L+ A VF + K
Sbjct: 331 AVISSCANLAAAKWGEQIHGHVLRLGLVNALSVANSIITLYSKCGLLKSASLVFHGITRK 390
Query: 296 SVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIE 355
+ W+++I Y+Q GY EA + + + +PNE L++ LS C + L +GK++
Sbjct: 391 DIISWSTIISVYSQGGYAKEAFDYLSWMRREGPKPNEFALSSVLSVCGSMALLEQGKQVH 450
Query: 356 EYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGD 415
+++ G++ V +++I M+SKCG + +A ++F + D+ W+AMINGYA HG
Sbjct: 451 AHLLCIGIDHEAMVHSAIISMYSKCGSVQEASKIFNGMKINDIISWTAMINGYAEHGYSQ 510
Query: 416 QALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLC 475
+A+NLF K+ V GLKPD V++ +L+AC+H+GMVD G +F M + + I PS EHY C
Sbjct: 511 EAINLFEKISSV-GLKPDYVMFIGVLTACNHAGMVDLGFYYFMLMTNVYRISPSKEHYGC 569
Query: 476 LVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGS 535
L+DLL RAGR A I MP VW+ LL AC H +V+ G + A+ LL L+P S
Sbjct: 570 LIDLLCRAGRLSEAEHIIRSMPFHTDDVVWSTLLRACRVHGDVDRGRWTAEQLLQLDPNS 629
Query: 536 TGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLS 595
G +I +AN++ + G WKEAA R LM + + KE GWS V ++ + FVAGD++H S
Sbjct: 630 AGTHITLANIYAAKGRWKEAAHIRKLMKSKGVIKERGWSWVNVNDQLNAFVAGDQAHPQS 689
Query: 596 VDIRKTLKEL 605
I LK L
Sbjct: 690 EHITTVLKLL 699
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 117/427 (27%), Positives = 209/427 (48%), Gaps = 10/427 (2%)
Query: 77 KCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTF 136
K +R + D+M R +SW ++I+ + A + EA+++ MWV
Sbjct: 69 KQGQLCKARYMFDKMT--HRDEISWTTLIAGYVNASDSYEALILFSNMWVHPGPQRDQFM 126
Query: 137 VSV-VSGCSFRQGIS----MHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEI 191
+SV + C+ I +H K GL+++ + ++++++ MY K GK+ + +F+++
Sbjct: 127 ISVALKACALGVNICFGELLHGFSVKSGLIHS-VFVSSALIDMYMKVGKIEQGCRVFEKM 185
Query: 192 GETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLAL 251
++VSWT II G V+ G E ++M R V D F + A L
Sbjct: 186 MTRNVVSWTAIIAGLVHAGYNMEGLLYFSEMWRSKVGYDSHTFAIALKASADSSLLHHGK 245
Query: 252 SMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLG 311
++H+ +K G++ + N L +MY KCG + R+F+ + V WT++I Y Q+G
Sbjct: 246 AIHTQTIKQGFDESSFVINTLATMYNKCGKPDYVMRLFEKMRMPDVVSWTTLISTYVQMG 305
Query: 312 YPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQT 371
AV FKR+ K+ V PN+ T A +S+CA L + G++I +++ GL + V
Sbjct: 306 EEEHAVEAFKRMRKSYVSPNKYTFAAVISSCANLAAAKWGEQIHGHVLRLGLVNALSVAN 365
Query: 372 SLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLK 431
S+I ++SKCG + A VF + KD+ WS +I+ Y+ G +A + M+ EG K
Sbjct: 366 SIITLYSKCGLLKSASLVFHGITRKDIISWSTIISVYSQGGYAKEAFDYLSWMRR-EGPK 424
Query: 432 PDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALK 491
P+ +S+LS C +++ G + GI+ + ++ + + G A K
Sbjct: 425 PNEFALSSVLSVCGSMALLEQGKQVHAHLLC-IGIDHEAMVHSAIISMYSKCGSVQEASK 483
Query: 492 TIHEMPV 498
+ M +
Sbjct: 484 IFNGMKI 490
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 79/281 (28%), Positives = 139/281 (49%), Gaps = 8/281 (2%)
Query: 169 NSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVT 228
NS + K G++ +AR +FD++ +SWTT+I GYVN + EA L M V
Sbjct: 61 NSELKQLVKQGQLCKARYMFDKMTHRDEISWTTLIAGYVNASDSYEALIL---FSNMWVH 117
Query: 229 P----DLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLEL 284
P D + + CA N+ +H +KSG + + + L+ MY K G +E
Sbjct: 118 PGPQRDQFMISVALKACALGVNICFGELLHGFSVKSGLIHSVFVSSALIDMYMKVGKIEQ 177
Query: 285 ARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAE 344
RVF+ ++ ++V WT++I G GY E + F + ++ V + T A L A A+
Sbjct: 178 GCRVFEKMMTRNVVSWTAIIAGLVHAGYNMEGLLYFSEMWRSKVGYDSHTFAIALKASAD 237
Query: 345 LGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAM 404
L GK I + G + + V +L M++KCG+ + +FE++ D+ W+ +
Sbjct: 238 SSLLHHGKAIHTQTIKQGFDESSFVINTLATMYNKCGKPDYVMRLFEKMRMPDVVSWTTL 297
Query: 405 INGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACS 445
I+ Y G + A+ F +M+ + P+ + +++S+C+
Sbjct: 298 ISTYVQMGEEEHAVEAFKRMRK-SYVSPNKYTFAAVISSCA 337
>gi|168017714|ref|XP_001761392.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162687398|gb|EDQ73781.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 833
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 206/611 (33%), Positives = 344/611 (56%), Gaps = 8/611 (1%)
Query: 9 GSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQ 68
G +E + + M+ G+ + TF VL AC++ + GK VH+ V+ GF D +
Sbjct: 137 GHVKEAFALFRQMVDEGLEPSIITFLSVLDACSSPAGLNWGKEVHAQVVTAGFVSDFRIG 196
Query: 69 TGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLG 128
T L+ MY K +R+V D + +R V ++N ++ ++++ ++A + M +G
Sbjct: 197 TALVSMYVKGGSMDDARQVFDGL--HIRDVSTFNVMVGGYAKSGDWEKAFELFYRMQQVG 254
Query: 129 LELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEA 184
L+ + +F+S++ GC + G ++H GL++ +I +A S++ MY G + A
Sbjct: 255 LKPNKISFLSILDGCWTPEALAWGKAVHAQCMNAGLVD-DIRVATSLIRMYTTCGSIEGA 313
Query: 185 RSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQV 244
R +FD + +VSWT +I GY GN+ +AFGL M+ + PD + +++++ CA
Sbjct: 314 RRVFDNMKVRDVVSWTVMIEGYAENGNIEDAFGLFATMQEEGIQPDRITYMHIMNACAIS 373
Query: 245 GNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMI 304
NL A +HS + +G+ + + LV MY KCG ++ AR+VFDA+ + V W++MI
Sbjct: 374 ANLNHAREIHSQVDIAGFGTDLLVSTALVHMYAKCGAIKDARQVFDAMPRRDVVSWSAMI 433
Query: 305 GGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLE 364
G Y + GY +EA F + ++++ P+ T L+AC LG+L G EI + L
Sbjct: 434 GAYVENGYGTEAFETFHLMKRSNIEPDGVTYINLLNACGHLGALDVGMEIYTQAIKADLV 493
Query: 365 SNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKM 424
S+ + +LI M +K G + +A+ +F+ + +D+ W+AMI GY++HG +AL LF +M
Sbjct: 494 SHVPLGNALIIMNAKHGSVERARYIFDTMVRRDVITWNAMIGGYSLHGNAREALYLFDRM 553
Query: 425 QHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAG 484
E +P++V + +LSACS +G VD+G FF + GI P+++ Y C+VDLLGRAG
Sbjct: 554 LK-ERFRPNSVTFVGVLSACSRAGFVDEGRRFFTYLLEGRGIVPTVKLYGCMVDLLGRAG 612
Query: 485 RFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMAN 544
D A I MPV+ + +W+ LL AC H N+++ E AA+ L ++P Y+ +++
Sbjct: 613 ELDEAELLIKSMPVKPTSSIWSSLLVACRIHGNLDVAERAAERCLMIDPYDGAVYVQLSH 672
Query: 545 LFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKE 604
++ +AGMW+ A R +M+ R + KE G + +E+ G V FV DRSH L +I L
Sbjct: 673 MYAAAGMWENVAKVRKVMESRGIRKEQGCTWIEVAGKVHTFVVEDRSHPLVGEIYAELAR 732
Query: 605 LHIKLLEAGYI 615
L + GYI
Sbjct: 733 LMNAIKREGYI 743
Score = 258 bits (660), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 136/439 (30%), Positives = 249/439 (56%), Gaps = 8/439 (1%)
Query: 23 QTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFV 82
+ G H +S T+ + + C + GK+V H+++ G Q + + LI +YS C +
Sbjct: 50 EGGNHIDSRTYVKLFQRCTELRDAALGKQVRDHIIQGGRQLNIYELNTLIKLYSICGNVT 109
Query: 83 SSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSG 142
+R++ D V ++VV+WN++I+ +++ EA + ++M GLE S TF+SV+
Sbjct: 110 EARQIFDS--VENKTVVTWNALIAGYAQVGHVKEAFALFRQMVDEGLEPSIITFLSVLDA 167
Query: 143 CSFRQGIS----MHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVS 198
CS G++ +H V G + ++ + +++SMY K G +++AR +FD + + +
Sbjct: 168 CSSPAGLNWGKEVHAQVVTAGFV-SDFRIGTALVSMYVKGGSMDDARQVFDGLHIRDVST 226
Query: 199 WTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLL 258
+ ++GGY G+ +AF L +M+++ + P+ + FL+++ GC L ++H+ +
Sbjct: 227 FNVMVGGYAKSGDWEKAFELFYRMQQVGLKPNKISFLSILDGCWTPEALAWGKAVHAQCM 286
Query: 259 KSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVN 318
+G ++ + L+ MYT CG +E ARRVFD + + V WT MI GYA+ G +A
Sbjct: 287 NAGLVDDIRVATSLIRMYTTCGSIEGARRVFDNMKVRDVVSWTVMIEGYAENGNIEDAFG 346
Query: 319 LFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFS 378
LF + + ++P+ T ++ACA +L+ +EI + + G ++ V T+L+HM++
Sbjct: 347 LFATMQEEGIQPDRITYMHIMNACAISANLNHAREIHSQVDIAGFGTDLLVSTALVHMYA 406
Query: 379 KCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYT 438
KCG I A++VF+ +P +D+ WSAMI Y +G G +A F+ M+ ++PD V Y
Sbjct: 407 KCGAIKDARQVFDAMPRRDVVSWSAMIGAYVENGYGTEAFETFHLMKR-SNIEPDGVTYI 465
Query: 439 SILSACSHSGMVDDGLSFF 457
++L+AC H G +D G+ +
Sbjct: 466 NLLNACGHLGALDVGMEIY 484
Score = 223 bits (567), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 142/520 (27%), Positives = 262/520 (50%), Gaps = 16/520 (3%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
M+ +G +E+ + M Q G+ N +F +L C ++ GK VH+ + G
Sbjct: 230 MVGGYAKSGDWEKAFELFYRMQQVGLKPNKISFLSILDGCWTPEALAWGKAVHAQCMNAG 289
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
D V T LI MY+ C +R+V D M V R VVSW +I ++ ++A +
Sbjct: 290 LVDDIRVATSLIRMYTTCGSIEGARRVFDNMKV--RDVVSWTVMIEGYAENGNIEDAFGL 347
Query: 121 LKEMWVLGLELSASTFVSVVSGCSFRQGIS----MHCCVYKLGLLNNEIPLANSVMSMYA 176
M G++ T++ +++ C+ ++ +H V G ++ ++ +++ MYA
Sbjct: 348 FATMQEEGIQPDRITYMHIMNACAISANLNHAREIHSQVDIAG-FGTDLLVSTALVHMYA 406
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K G + +AR +FD + +VSW+ +IG YV G EAF + M+R ++ PD V ++N
Sbjct: 407 KCGAIKDARQVFDAMPRRDVVSWSAMIGAYVENGYGTEAFETFHLMKRSNIEPDGVTYIN 466
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
L+ C +G L + + +++ +K+ + PL N L+ M K G +E AR +FD ++ +
Sbjct: 467 LLNACGHLGALDVGMEIYTQAIKADLVSHVPLGNALIIMNAKHGSVERARYIFDTMVRRD 526
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEE 356
V W +MIGGY+ G EA+ LF R+LK RPN T LSAC+ G + +G+
Sbjct: 527 VITWNAMIGGYSLHGNAREALYLFDRMLKERFRPNSVTFVGVLSACSRAGFVDEGRRFFT 586
Query: 357 YIVL-NGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDL-AVWSAMINGYAIHGMG 414
Y++ G+ ++ ++ + + G +++A+ + + +P K ++WS+++ IHG
Sbjct: 587 YLLEGRGIVPTVKLYGCMVDLLGRAGELDEAELLIKSMPVKPTSSIWSSLLVACRIHGNL 646
Query: 415 DQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYL 474
D A + ++ D VY + + +GM ++ K M+S GI E
Sbjct: 647 DVAERAAERCLMIDPY--DGAVYVQLSHMYAAAGMWENVAKVRKVMESR-GIRK--EQGC 701
Query: 475 CLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMK 514
+++ G+ F + ++ H + E+ A++ A L++A +
Sbjct: 702 TWIEVAGKVHTFVVEDRS-HPLVGEIYAEL-ARLMNAIKR 739
Score = 194 bits (494), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 105/330 (31%), Positives = 179/330 (54%), Gaps = 4/330 (1%)
Query: 169 NSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVT 228
N+++ +Y+ G V EAR IFD + ++V+W +I GY VG+V EAF L QM +
Sbjct: 96 NTLIKLYSICGNVTEARQIFDSVENKTVVTWNALIAGYAQVGHVKEAFALFRQMVDEGLE 155
Query: 229 PDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRV 288
P ++ FL+++ C+ L +H+ ++ +G+ ++ + LVSMY K G ++ AR+V
Sbjct: 156 PSIITFLSVLDACSSPAGLNWGKEVHAQVVTAGFVSDFRIGTALVSMYVKGGSMDDARQV 215
Query: 289 FDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSL 348
FD + + V + M+GGYA+ G +A LF R+ + ++PN+ + + L C +L
Sbjct: 216 FDGLHIRDVSTFNVMVGGYAKSGDWEKAFELFYRMQQVGLKPNKISFLSILDGCWTPEAL 275
Query: 349 SKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGY 408
+ GK + + GL + +V TSLI M++ CG I A+ VF+ + +D+ W+ MI GY
Sbjct: 276 AWGKAVHAQCMNAGLVDDIRVATSLIRMYTTCGSIEGARRVFDNMKVRDVVSWTVMIEGY 335
Query: 409 AIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQ-SNFGIE 467
A +G + A LF MQ EG++PD + Y I++AC+ S ++ + + FG +
Sbjct: 336 AENGNIEDAFGLFATMQE-EGIQPDRITYMHIMNACAISANLNHAREIHSQVDIAGFGTD 394
Query: 468 PSIEHYLCLVDLLGRAGRFDLALKTIHEMP 497
+ LV + + G A + MP
Sbjct: 395 LLVS--TALVHMYAKCGAIKDARQVFDAMP 422
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 72/130 (55%), Gaps = 1/130 (0%)
Query: 316 AVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIH 375
A ++ +RL + + T C EL + GK++ ++I+ G + N +LI
Sbjct: 41 ANDVLQRLGEGGNHIDSRTYVKLFQRCTELRDAALGKQVRDHIIQGGRQLNIYELNTLIK 100
Query: 376 MFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAV 435
++S CG + +A+++F+ V +K + W+A+I GYA G +A LF +M EGL+P +
Sbjct: 101 LYSICGNVTEARQIFDSVENKTVVTWNALIAGYAQVGHVKEAFALFRQMVD-EGLEPSII 159
Query: 436 VYTSILSACS 445
+ S+L ACS
Sbjct: 160 TFLSVLDACS 169
>gi|115457318|ref|NP_001052259.1| Os04g0218100 [Oryza sativa Japonica Group]
gi|113563830|dbj|BAF14173.1| Os04g0218100, partial [Oryza sativa Japonica Group]
Length = 890
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 223/681 (32%), Positives = 348/681 (51%), Gaps = 62/681 (9%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+IR G + ++ ML+ G + FT P VLKAC + S G H + G
Sbjct: 126 LIREHIKQGRLDSAINVSCRMLRAGTRPDHFTLPHVLKACGELPSYRCGSAFHGLICCNG 185
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVR-LRSVVSWNSIISAHSRACLNDEAIL 119
F+ + F+ L+ MYS+C + + DE+ R + V+SWNSI+SAH ++ A+
Sbjct: 186 FESNVFICNALVAMYSRCGSLEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALD 245
Query: 120 VLKEMWVLGLELSAS------TFVSVVSGCSFRQGISMHCCVYKLGLLNNEIP---LANS 170
+ +M ++ E + + V+++ C + + V+ + N P + N+
Sbjct: 246 LFSKMTLIVHEKPTNERSDIISIVNILPACGSLKAVPQTKEVHGNAIRNGTFPDVFVGNA 305
Query: 171 VMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPD 230
++ YAK G + A +F+ + +VSW ++ GY GN AF L MR+ ++ D
Sbjct: 306 LIDAYAKCGLMENAVKVFNMMEFKDVVSWNAMVAGYSQSGNFEAAFELFKNMRKENIPLD 365
Query: 231 LVVFLNLILG-----------------------------------CAQVGNLFLALSMHS 255
+V + +I G CA +G +H+
Sbjct: 366 VVTWTAVIAGYSQRGCSHEALNLFRQMIFSGSLPNCVTIISVLSACASLGAFSQGTEIHA 425
Query: 256 LLLKS---------GYNNEDPL-DNLLVSMYTKCGDLELARRVFDAVL--EKSVFLWTSM 303
LK+ G +ED + N L+ MY+KC + AR +FD + E++V WT M
Sbjct: 426 YSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVM 485
Query: 304 IGGYAQLGYPSEAVNLFKRLLKTS--VRPNEATLATTLSACAELGSLSKGKEIEEYIVLN 361
IGG+AQ G ++A+ LF ++ V PN T++ L ACA L ++ GK+I Y++ +
Sbjct: 486 IGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRH 545
Query: 362 GL--ESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALN 419
S V LI M+SKCG ++ A+ VF+ + K W++M+ GY +HG G +AL+
Sbjct: 546 HRYESSAYFVANCLIDMYSKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALD 605
Query: 420 LFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDL 479
+F KM+ G PD + + +L ACSH GMVD GLS+F SM +++G+ P EHY C +DL
Sbjct: 606 IFDKMRKA-GFVPDDITFLVVLYACSHCGMVDQGLSYFDSMSADYGLTPRAEHYACAIDL 664
Query: 480 LGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNY 539
L R+GR D A +T+ +MP+E A VW LLSAC H NVEL E+A L+ +N + G+Y
Sbjct: 665 LARSGRLDKAWRTVKDMPMEPTAVVWVALLSACRVHSNVELAEHALNKLVEMNAENDGSY 724
Query: 540 ILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIR 599
L++N++ +AG WK+ A R LM + K PG S V+ F GDRSH LS I
Sbjct: 725 TLISNIYATAGRWKDVARIRHLMKKSGIKKRPGCSWVQGQKGTASFFVGDRSHPLSPQIY 784
Query: 600 KTLKELHIKLLEAGYIAEADI 620
L+ L ++ GY+ E +
Sbjct: 785 ALLESLIDRIKAMGYVPETNF 805
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 76/303 (25%), Positives = 148/303 (48%), Gaps = 10/303 (3%)
Query: 167 LANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMS 226
L V++ Y G + A + + + + V W +I ++ G ++ A + +M R
Sbjct: 91 LGTGVVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRMLRAG 150
Query: 227 VTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELAR 286
PD +++ C ++ + + H L+ +G+ + + N LV+MY++CG LE A
Sbjct: 151 TRPDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEAS 210
Query: 287 RVFDAVLEK---SVFLWTSMIGGYAQLGYPSEAVNLFKRLL------KTSVRPNEATLAT 337
+FD + ++ V W S++ + + A++LF ++ T+ R + ++
Sbjct: 211 MIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVN 270
Query: 338 TLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKD 397
L AC L ++ + KE+ + NG + V +LI ++KCG + A +VF + KD
Sbjct: 271 ILPACGSLKAVPQTKEVHGNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKVFNMMEFKD 330
Query: 398 LAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFF 457
+ W+AM+ GY+ G + A LF M+ E + D V +T++++ S G + L+ F
Sbjct: 331 VVSWNAMVAGYSQSGNFEAAFELFKNMRK-ENIPLDVVTWTAVIAGYSQRGCSHEALNLF 389
Query: 458 KSM 460
+ M
Sbjct: 390 RQM 392
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/269 (25%), Positives = 116/269 (43%), Gaps = 10/269 (3%)
Query: 272 LVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPN 331
+V+ Y CG + A V + V W +I + + G A+N+ R+L+ RP+
Sbjct: 95 VVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRMLRAGTRPD 154
Query: 332 EATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFE 391
TL L AC EL S G I NG ESN + +L+ M+S+CG + +A +F+
Sbjct: 155 HFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEASMIFD 214
Query: 392 RVPDK---DLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKP-----DAVVYTSILSA 443
+ + D+ W+++++ + AL+LF KM + KP D + +IL A
Sbjct: 215 EITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVNILPA 274
Query: 444 CSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQ 503
C V + N G P + L+D + G + A+K + M +
Sbjct: 275 CGSLKAVPQTKEVHGNAIRN-GTFPDVFVGNALIDAYAKCGLMENAVKVFNMMEFK-DVV 332
Query: 504 VWAPLLSACMKHHNVELGEYAAKNLLTLN 532
W +++ + N E KN+ N
Sbjct: 333 SWNAMVAGYSQSGNFEAAFELFKNMRKEN 361
>gi|449479821|ref|XP_004155717.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
Length = 745
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 212/620 (34%), Positives = 343/620 (55%), Gaps = 29/620 (4%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHG-NSFTFPLVLKACANINSIWDGKRVHSHVLKV 59
+I + TNN + + + Y M ++F P +LKACA +S G+ +H K
Sbjct: 58 LISSYTNNHLPQASFNCYLHMRSNDAAALDNFILPSLLKACAQASSGDLGRELHGFAQKN 117
Query: 60 GFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAIL 119
GF D FV L++MY KC VS+R V D+MP R VVSW +++ + R+ EA+
Sbjct: 118 GFASDVFVCNALMNMYEKCGCLVSARLVFDQMPER--DVVSWTTMLGCYVRSKAFGEALR 175
Query: 120 VLKEMWVLGLELSASTFVSVVSG----CSFRQGISMHCCVYK-LGLLNNEIPLANSVMSM 174
+++EM +G++LS +S+++ + G ++H + + +G E+ + +++ M
Sbjct: 176 LVREMQFVGVKLSGVALISLIAVFGNLLDMKSGRAVHGYIVRNVGDEKMEVSMTTALIDM 235
Query: 175 YAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVF 234
Y K G + A+ +FD + + S+VSWT +I G + ++E N+M + P+ +
Sbjct: 236 YCKGGCLASAQRLFDRLSKRSVVSWTVMIAGCIRSCRLDEGAKNFNRMLEEKLFPNEITL 295
Query: 235 LNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLE 294
L+LI C VG L L H+ LL++G+ L L+ MY KCG + AR +F+ V +
Sbjct: 296 LSLITECGFVGTLDLGKWFHAYLLRNGFGMSLALVTALIDMYGKCGQVGYARALFNGVKK 355
Query: 295 KSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEI 354
K V +W+ +I YA + + NLF +L V+PN T+ + LS CAE G+L GK
Sbjct: 356 KDVKIWSVLISAYAHVSCMDQVFNLFVEMLNNDVKPNNVTMVSLLSLCAEAGALDLGKWT 415
Query: 355 EEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMG 414
YI +GLE + ++T+LI+M++KCG + A+ +F +D+ +W+ M+ G+++HG G
Sbjct: 416 HAYINRHGLEVDVILETALINMYAKCGDVTIARSLFNEAMQRDIRMWNTMMAGFSMHGCG 475
Query: 415 DQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYL 474
+AL LF +M+ G++P+ + + SI ACSHSG+ +EHY
Sbjct: 476 KEALELFSEMES-HGVEPNDITFVSIFHACSHSGL--------------------MEHYG 514
Query: 475 CLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPG 534
CLVDLLGRAG D A I MP+ +W LL+AC H N+ LGE AA+ +L L+P
Sbjct: 515 CLVDLLGRAGHLDEAHNIIENMPMRPNTIIWGALLAACKLHKNLALGEVAARKILELDPQ 574
Query: 535 STGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHL 594
+ G +L +N++ SA W + + R M + KEPG S +E+ GSV F +GD++
Sbjct: 575 NCGYSVLKSNIYASAKRWNDVTSVREAMSHSGMKKEPGLSWIEVSGSVHHFKSGDKACTQ 634
Query: 595 SVDIRKTLKELHIKLLEAGY 614
+ + + + E+ IKL E+GY
Sbjct: 635 TTKVYEMVTEMCIKLRESGY 654
>gi|21741755|emb|CAD39781.1| OSJNBa0060B20.9 [Oryza sativa Japonica Group]
Length = 897
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 223/681 (32%), Positives = 348/681 (51%), Gaps = 62/681 (9%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+IR G + ++ ML+ G + FT P VLKAC + S G H + G
Sbjct: 133 LIREHIKQGRLDSAINVSCRMLRAGTRPDHFTLPHVLKACGELPSYRCGSAFHGLICCNG 192
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVR-LRSVVSWNSIISAHSRACLNDEAIL 119
F+ + F+ L+ MYS+C + + DE+ R + V+SWNSI+SAH ++ A+
Sbjct: 193 FESNVFICNALVAMYSRCGSLEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALD 252
Query: 120 VLKEMWVLGLELSAS------TFVSVVSGCSFRQGISMHCCVYKLGLLNNEIP---LANS 170
+ +M ++ E + + V+++ C + + V+ + N P + N+
Sbjct: 253 LFSKMTLIVHEKPTNERSDIISIVNILPACGSLKAVPQTKEVHGNAIRNGTFPDVFVGNA 312
Query: 171 VMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPD 230
++ YAK G + A +F+ + +VSW ++ GY GN AF L MR+ ++ D
Sbjct: 313 LIDAYAKCGLMENAVKVFNMMEFKDVVSWNAMVAGYSQSGNFEAAFELFKNMRKENIPLD 372
Query: 231 LVVFLNLILG-----------------------------------CAQVGNLFLALSMHS 255
+V + +I G CA +G +H+
Sbjct: 373 VVTWTAVIAGYSQRGCSHEALNLFRQMIFSGSLPNCVTIISVLSACASLGAFSQGTEIHA 432
Query: 256 LLLKS---------GYNNEDPL-DNLLVSMYTKCGDLELARRVFDAVL--EKSVFLWTSM 303
LK+ G +ED + N L+ MY+KC + AR +FD + E++V WT M
Sbjct: 433 YSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVM 492
Query: 304 IGGYAQLGYPSEAVNLFKRLLKTS--VRPNEATLATTLSACAELGSLSKGKEIEEYIVLN 361
IGG+AQ G ++A+ LF ++ V PN T++ L ACA L ++ GK+I Y++ +
Sbjct: 493 IGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRH 552
Query: 362 GL--ESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALN 419
S V LI M+SKCG ++ A+ VF+ + K W++M+ GY +HG G +AL+
Sbjct: 553 HRYESSAYFVANCLIDMYSKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALD 612
Query: 420 LFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDL 479
+F KM+ G PD + + +L ACSH GMVD GLS+F SM +++G+ P EHY C +DL
Sbjct: 613 IFDKMRKA-GFVPDDITFLVVLYACSHCGMVDQGLSYFDSMSADYGLTPRAEHYACAIDL 671
Query: 480 LGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNY 539
L R+GR D A +T+ +MP+E A VW LLSAC H NVEL E+A L+ +N + G+Y
Sbjct: 672 LARSGRLDKAWRTVKDMPMEPTAVVWVALLSACRVHSNVELAEHALNKLVEMNAENDGSY 731
Query: 540 ILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIR 599
L++N++ +AG WK+ A R LM + K PG S V+ F GDRSH LS I
Sbjct: 732 TLISNIYATAGRWKDVARIRHLMKKSGIKKRPGCSWVQGQKGTASFFVGDRSHPLSPQIY 791
Query: 600 KTLKELHIKLLEAGYIAEADI 620
L+ L ++ GY+ E +
Sbjct: 792 ALLESLIDRIKAMGYVPETNF 812
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 76/303 (25%), Positives = 148/303 (48%), Gaps = 10/303 (3%)
Query: 167 LANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMS 226
L V++ Y G + A + + + + V W +I ++ G ++ A + +M R
Sbjct: 98 LGTGVVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRMLRAG 157
Query: 227 VTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELAR 286
PD +++ C ++ + + H L+ +G+ + + N LV+MY++CG LE A
Sbjct: 158 TRPDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEAS 217
Query: 287 RVFDAVLEK---SVFLWTSMIGGYAQLGYPSEAVNLFKRLL------KTSVRPNEATLAT 337
+FD + ++ V W S++ + + A++LF ++ T+ R + ++
Sbjct: 218 MIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVN 277
Query: 338 TLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKD 397
L AC L ++ + KE+ + NG + V +LI ++KCG + A +VF + KD
Sbjct: 278 ILPACGSLKAVPQTKEVHGNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKVFNMMEFKD 337
Query: 398 LAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFF 457
+ W+AM+ GY+ G + A LF M+ E + D V +T++++ S G + L+ F
Sbjct: 338 VVSWNAMVAGYSQSGNFEAAFELFKNMRK-ENIPLDVVTWTAVIAGYSQRGCSHEALNLF 396
Query: 458 KSM 460
+ M
Sbjct: 397 RQM 399
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 104/233 (44%), Gaps = 9/233 (3%)
Query: 272 LVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPN 331
+V+ Y CG + A V + V W +I + + G A+N+ R+L+ RP+
Sbjct: 102 VVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRMLRAGTRPD 161
Query: 332 EATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFE 391
TL L AC EL S G I NG ESN + +L+ M+S+CG + +A +F+
Sbjct: 162 HFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEASMIFD 221
Query: 392 RVPDK---DLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKP-----DAVVYTSILSA 443
+ + D+ W+++++ + AL+LF KM + KP D + +IL A
Sbjct: 222 EITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVNILPA 281
Query: 444 CSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEM 496
C V + N G P + L+D + G + A+K + M
Sbjct: 282 CGSLKAVPQTKEVHGNAIRN-GTFPDVFVGNALIDAYAKCGLMENAVKVFNMM 333
>gi|224114351|ref|XP_002332376.1| predicted protein [Populus trichocarpa]
gi|222832200|gb|EEE70677.1| predicted protein [Populus trichocarpa]
Length = 660
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 207/572 (36%), Positives = 336/572 (58%), Gaps = 8/572 (1%)
Query: 50 KRVHSHVLKVGFQQDAFVQTGLIDMYS--KCSDFVSSRKVLDEMPVRLRSVVSWNSIISA 107
K++H+ +L+ G D F + ++ S + +R V ++P + + NSII
Sbjct: 5 KQIHAQMLRTGLFFDPFTASKIVAFCSLQESGSLQYARLVFSQIPNP--TSYTCNSIIRG 62
Query: 108 HSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGC-SFRQGISMHCCVYKLGLLNNEIP 166
+ L+ EA+L +EM V GL TF S+ C + +G +HC KLG ++
Sbjct: 63 CTDKNLHQEALLFYQEMMVQGLIPDRYTFPSLFKSCRNSSEGKQIHCHSTKLGFASDTYA 122
Query: 167 LANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQM-RRM 225
N++M+MY+ G + AR +FD++ + ++VSW T+IG + NEA L ++M +
Sbjct: 123 -QNTLMNMYSNCGCLVSARKVFDKMEDKTVVSWATMIGVHAQWDQPNEAVRLFDRMMKSE 181
Query: 226 SVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELA 285
+V P+ V +N++ CA+ +L + +H + + G+ L+ +L+ +Y KCG ++LA
Sbjct: 182 NVKPNEVTLVNVLTACARARDLAMVKRIHEYIDEHGFGRHVVLNTVLMDVYCKCGCVQLA 241
Query: 286 RRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAEL 345
R +FD EK++F W MI G+ + EA+ LF+ + ++ ++ T+A+ L AC L
Sbjct: 242 RDLFDKAQEKNLFSWNIMINGHVEDSNYEEALLLFREMQTKGIKGDKVTMASLLLACTHL 301
Query: 346 GSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMI 405
G+L GK + YI ++ + + T+L+ M++KCG I A +VF +P+KD+ W+A+I
Sbjct: 302 GALELGKWLHAYIKKQRIDVDVALGTALVDMYAKCGSIETAIQVFHEMPEKDVMTWTALI 361
Query: 406 NGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFG 465
G A+ G + AL F +M H++G+KPDA+ + +L+ACSH+G VD+G+S F SM +G
Sbjct: 362 LGLAMCGQAENALQYFDEM-HIKGVKPDAITFVGVLAACSHAGFVDEGISHFNSMSDTYG 420
Query: 466 IEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAA 525
I+P+IEHY LVD+LGRAGR A + I MP+ V LL AC H N+E E AA
Sbjct: 421 IQPTIEHYGGLVDILGRAGRIAEAEELIKSMPMAPDQFVLGGLLGACRIHGNLEAAERAA 480
Query: 526 KNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVF 585
K LL ++P +G Y+L++N++ S+ W+EA R LM +R + K PG SQ+E+ G V F
Sbjct: 481 KQLLEIDPYHSGTYVLLSNIYKSSKKWEEAKRTRELMAERGMRKPPGCSQIEVHGVVHEF 540
Query: 586 VAGDRSHHLSVDIRKTLKELHIKLLEAGYIAE 617
V GD SH S +I + L+++ KL AGY+ +
Sbjct: 541 VKGDSSHRQSSEINEMLEDMISKLKNAGYVPD 572
Score = 202 bits (513), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 127/421 (30%), Positives = 216/421 (51%), Gaps = 17/421 (4%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+IR T+ +E L Y M+ G+ + +TFP + K+C N + +GK++H H K+G
Sbjct: 59 IIRGCTDKNLHQEALLFYQEMMVQGLIPDRYTFPSLFKSCRNSS---EGKQIHCHSTKLG 115
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F D + Q L++MYS C VS+RKV D+M ++VVSW ++I H++ +EA+ +
Sbjct: 116 FASDTYAQNTLMNMYSNCGCLVSARKVFDKM--EDKTVVSWATMIGVHAQWDQPNEAVRL 173
Query: 121 LKEMW-VLGLELSASTFVSVVSGCSFRQGISM----HCCVYKLGLLNNEIPLANSVMSMY 175
M ++ + T V+V++ C+ + ++M H + + G + L +M +Y
Sbjct: 174 FDRMMKSENVKPNEVTLVNVLTACARARDLAMVKRIHEYIDEHG-FGRHVVLNTVLMDVY 232
Query: 176 AKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFL 235
K G V AR +FD+ E ++ SW +I G+V N EA L +M+ + D V
Sbjct: 233 CKCGCVQLARDLFDKAQEKNLFSWNIMINGHVEDSNYEEALLLFREMQTKGIKGDKVTMA 292
Query: 236 NLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEK 295
+L+L C +G L L +H+ + K + + L LV MY KCG +E A +VF + EK
Sbjct: 293 SLLLACTHLGALELGKWLHAYIKKQRIDVDVALGTALVDMYAKCGSIETAIQVFHEMPEK 352
Query: 296 SVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIE 355
V WT++I G A G A+ F + V+P+ T L+AC+ G + +G I
Sbjct: 353 DVMTWTALILGLAMCGQAENALQYFDEMHIKGVKPDAITFVGVLAACSHAGFVDEG--IS 410
Query: 356 EYIVLN---GLESNRQVQTSLIHMFSKCGRINKAKEVFERVP-DKDLAVWSAMINGYAIH 411
+ ++ G++ + L+ + + GRI +A+E+ + +P D V ++ IH
Sbjct: 411 HFNSMSDTYGIQPTIEHYGGLVDILGRAGRIAEAEELIKSMPMAPDQFVLGGLLGACRIH 470
Query: 412 G 412
G
Sbjct: 471 G 471
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 74/301 (24%), Positives = 128/301 (42%), Gaps = 41/301 (13%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI + ++EE L + M G+ G+ T +L AC ++ ++ GK +H+++ K
Sbjct: 259 MINGHVEDSNYEEALLLFREMQTKGIKGDKVTMASLLLACTHLGALELGKWLHAYIKKQR 318
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
D + T L+DMY+KC ++ +V EMP + V++W ++I + + A+
Sbjct: 319 IDVDVALGTALVDMYAKCGSIETAIQVFHEMPE--KDVMTWTALILGLAMCGQAENALQY 376
Query: 121 LKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGK 180
EM + G++ A TFV V++ CS G ++ I NS+ Y
Sbjct: 377 FDEMHIKGVKPDAITFVGVLAACS------------HAGFVDEGISHFNSMSDTYGIQPT 424
Query: 181 VNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILG 240
+ + D +G G + EA L ++ M + PD V L+
Sbjct: 425 IEHYGGLVDILG---------------RAGRIAEAEEL---IKSMPMAPDQFVLGGLLGA 466
Query: 241 CAQVGNLFLALSMHSLLLKSGYNNEDPLDN----LLVSMYTKCGDLELARRVFDAVLEKS 296
C GNL A LL+ DP + LL ++Y E A+R + + E+
Sbjct: 467 CRIHGNLEAAERAAKQLLEI-----DPYHSGTYVLLSNIYKSSKKWEEAKRTRELMAERG 521
Query: 297 V 297
+
Sbjct: 522 M 522
>gi|147854092|emb|CAN83391.1| hypothetical protein VITISV_041405 [Vitis vinifera]
Length = 886
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 197/593 (33%), Positives = 335/593 (56%), Gaps = 10/593 (1%)
Query: 6 TNNGSFEETLSTYSSMLQ-TGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQD 64
T N F E L + +L + ++FT+P VLKAC+ + + GK VH+HV+K GF D
Sbjct: 273 TKNFIFIEGLEVFHRLLHFPYLKPDAFTYPSVLKACSGLGRVGYGKMVHTHVIKSGFAMD 332
Query: 65 AFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEM 124
V + + MY+KC+ F + K+ DEMP R V SWN++IS + + ++A+ + +EM
Sbjct: 333 VVVMSSAVGMYAKCNVFEDAIKLFDEMPER--DVASWNNVISCYYQDGQPEKALELFEEM 390
Query: 125 WVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGK 180
V G + + T +V+S C+ +G +H + + G + ++++++ MY K G
Sbjct: 391 KVSGFKPDSVTLTTVISSCARLLDLERGKEIHMELVRSGFALDGF-VSSALVDMYGKCGC 449
Query: 181 VNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILG 240
+ A+ +F++I ++VSW ++I GY G+ L +M + P L ++++
Sbjct: 450 LEMAKEVFEQIQRKNVVSWNSMIAGYSLKGDSKSCIELFRRMDEEGIRPTLTTLSSILMA 509
Query: 241 CAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLW 300
C++ NL L +H ++++ + +++ L+ +Y KCG++ A VF + + +V W
Sbjct: 510 CSRSVNLQLGKFIHGYIIRNRVEADIFVNSSLIDLYFKCGNIGSAENVFQNMPKTNVVSW 569
Query: 301 TSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVL 360
MI GY ++G EA+ +F + K V+P+ T + L AC++L L KGKEI +I+
Sbjct: 570 NVMISGYVKVGSYLEALVIFTDMRKAGVKPDAITFTSVLPACSQLAVLEKGKEIHNFIIE 629
Query: 361 NGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNL 420
+ LE N V +L+ M++KCG +++A +F ++P++D W++MI Y HG +AL L
Sbjct: 630 SKLEINEVVMGALLDMYAKCGAVDEALHIFNQLPERDFVSWTSMIAAYGSHGQAFEALKL 689
Query: 421 FYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLL 480
F KMQ + KPD V + +ILSACSH+G+VD+G +F M + +G +P++EHY CL+DLL
Sbjct: 690 FEKMQQSDA-KPDKVTFLAILSACSHAGLVDEGCYYFNQMIAEYGFKPAVEHYSCLIDLL 748
Query: 481 GRAGRFDLALKTIHEMP-VEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNY 539
GR GR A + + P + + + L SAC H ++LGE + L+ +P Y
Sbjct: 749 GRVGRLREAYEILQRTPDIREDVGLLSTLFSACHLHKKLDLGEQIGRLLIEKDPDDPSTY 808
Query: 540 ILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSH 592
I+++N++ S W E R + + L K PG S +E+ + FV D+SH
Sbjct: 809 IILSNMYASVKKWDEVRKVRLKIKELGLKKNPGCSWIEVGKRIHPFVVEDKSH 861
Score = 229 bits (585), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 148/476 (31%), Positives = 246/476 (51%), Gaps = 18/476 (3%)
Query: 49 GKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAH 108
GK +H ++ +G Q + + LI++Y C F S++ V + L + WN +++A
Sbjct: 214 GKLIHQKIVSLGLQNNITLCKSLINLYFSCHLFQSAKLVFQTIENPL-DITLWNGLMAAC 272
Query: 109 SRACLNDEAILVLKEMWVLG-LELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNN 163
++ + E + V + L+ A T+ SV+ CS G +H V K G +
Sbjct: 273 TKNFIFIEGLEVFHRLLHFPYLKPDAFTYPSVLKACSGLGRVGYGKMVHTHVIKSGFAMD 332
Query: 164 EIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMR 223
+ ++++V MYAK +A +FDE+ E + SW +I Y G +A L +M+
Sbjct: 333 VVVMSSAV-GMYAKCNVFEDAIKLFDEMPERDVASWNNVISCYYQDGQPEKALELFEEMK 391
Query: 224 RMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLE 283
PD V +I CA++ +L +H L++SG+ + + + LV MY KCG LE
Sbjct: 392 VSGFKPDSVTLTTVISSCARLLDLERGKEIHMELVRSGFALDGFVSSALVDMYGKCGCLE 451
Query: 284 LARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACA 343
+A+ VF+ + K+V W SMI GY+ G + LF+R+ + +RP TL++ L AC+
Sbjct: 452 MAKEVFEQIQRKNVVSWNSMIAGYSLKGDSKSCIELFRRMDEEGIRPTLTTLSSILMACS 511
Query: 344 ELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSA 403
+L GK I YI+ N +E++ V +SLI ++ KCG I A+ VF+ +P ++ W+
Sbjct: 512 RSVNLQLGKFIHGYIIRNRVEADIFVNSSLIDLYFKCGNIGSAENVFQNMPKTNVVSWNV 571
Query: 404 MINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSN 463
MI+GY G +AL +F M+ G+KPDA+ +TS+L ACS +++ G N
Sbjct: 572 MISGYVKVGSYLEALVIFTDMRKA-GVKPDAITFTSVLPACSQLAVLEKGKEI-----HN 625
Query: 464 FGIEPSIE----HYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKH 515
F IE +E L+D+ + G D AL +++P E W +++A H
Sbjct: 626 FIIESKLEINEVVMGALLDMYAKCGAVDEALHIFNQLP-ERDFVSWTSMIAAYGSH 680
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 77/249 (30%), Positives = 130/249 (52%), Gaps = 7/249 (2%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI + G + + + M + G+ T +L AC+ ++ GK +H ++++
Sbjct: 471 MIAGYSLKGDSKSCIELFRRMDEEGIRPTLTTLSSILMACSRSVNLQLGKFIHGYIIRNR 530
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+ D FV + LID+Y KC + S+ V MP +VVSWN +IS + + EA+++
Sbjct: 531 VEADIFVNSSLIDLYFKCGNIGSAENVFQNMPK--TNVVSWNVMISGYVKVGSYLEALVI 588
Query: 121 LKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
+M G++ A TF SV+ CS +G +H + + L NE+ + +++ MYA
Sbjct: 589 FTDMRKAGVKPDAITFTSVLPACSQLAVLEKGKEIHNFIIESKLEINEV-VMGALLDMYA 647
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K G V+EA IF+++ E VSWT++I Y + G EA L +M++ PD V FL
Sbjct: 648 KCGAVDEALHIFNQLPERDFVSWTSMIAAYGSHGQAFEALKLFEKMQQSDAKPDKVTFLA 707
Query: 237 LILGCAQVG 245
++ C+ G
Sbjct: 708 ILSACSHAG 716
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 68/289 (23%), Positives = 125/289 (43%), Gaps = 34/289 (11%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI GS+ E L ++ M + GV ++ TF VL AC+ + + GK +H+ +++
Sbjct: 572 MISGYVKVGSYLEALVIFTDMRKAGVKPDAITFTSVLPACSQLAVLEKGKEIHNFIIESK 631
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+ + V L+DMY+KC + + +++P R VSW S+I+A+ EA+ +
Sbjct: 632 LEINEVVMGALLDMYAKCGAVDEALHIFNQLPE--RDFVSWTSMIAAYGSHGQAFEALKL 689
Query: 121 LKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGK 180
++M + TF++++S CS G+ C Y N +++ Y
Sbjct: 690 FEKMQQSDAKPDKVTFLAILSACS-HAGLVDEGCYY-----------FNQMIAEYGFKPA 737
Query: 181 VNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILG 240
V + D +G VG + EA+ + R + D+ + L
Sbjct: 738 VEHYSCLIDLLG---------------RVGRLREAYEILQ--RTPDIREDVGLLSTLFSA 780
Query: 241 CAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVS-MYTKCGDLELARRV 288
C L L + LL++ + +DP +++S MY + R+V
Sbjct: 781 CHLHKKLDLGEQIGRLLIEK--DPDDPSTYIILSNMYASVKKWDEVRKV 827
>gi|225436612|ref|XP_002275537.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27110-like [Vitis vinifera]
Length = 694
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 197/593 (33%), Positives = 335/593 (56%), Gaps = 10/593 (1%)
Query: 6 TNNGSFEETLSTYSSMLQ-TGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQD 64
T N F E L + +L + ++FT+P VLKAC+ + + GK VH+HV+K GF D
Sbjct: 81 TKNFIFIEGLEVFHRLLHFPYLKPDAFTYPSVLKACSGLGRVGYGKMVHTHVIKSGFAMD 140
Query: 65 AFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEM 124
V + + MY+KC+ F + K+ DEMP R V SWN++IS + + ++A+ + +EM
Sbjct: 141 VVVMSSAVGMYAKCNVFEDAIKLFDEMPER--DVASWNNVISCYYQDGQPEKALELFEEM 198
Query: 125 WVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGK 180
V G + + T +V+S C+ +G +H + + G + ++++++ MY K G
Sbjct: 199 KVSGFKPDSVTLTTVISSCARLLDLERGKEIHMELVRSGFALDGF-VSSALVDMYGKCGC 257
Query: 181 VNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILG 240
+ A+ +F++I ++VSW ++I GY G+ L +M + P L ++++
Sbjct: 258 LEMAKEVFEQIQRKNVVSWNSMIAGYSLKGDSKSCIELFRRMDEEGIRPTLTTLSSILMA 317
Query: 241 CAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLW 300
C++ NL L +H ++++ + +++ L+ +Y KCG++ A VF + + +V W
Sbjct: 318 CSRSVNLQLGKFIHGYIIRNRVEADIFVNSSLIDLYFKCGNIGSAENVFQNMPKTNVVSW 377
Query: 301 TSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVL 360
MI GY ++G EA+ +F + K V+P+ T + L AC++L L KGKEI +I+
Sbjct: 378 NVMISGYVKVGSYLEALVIFTDMRKAGVKPDAITFTSVLPACSQLAVLEKGKEIHNFIIE 437
Query: 361 NGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNL 420
+ LE N V +L+ M++KCG +++A +F ++P++D W++MI Y HG +AL L
Sbjct: 438 SKLEINEVVMGALLDMYAKCGAVDEALHIFNQLPERDFVSWTSMIAAYGSHGQAFEALKL 497
Query: 421 FYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLL 480
F KMQ + KPD V + +ILSACSH+G+VD+G +F M + +G +P++EHY CL+DLL
Sbjct: 498 FEKMQQSDA-KPDKVTFLAILSACSHAGLVDEGCYYFNQMIAEYGFKPAVEHYSCLIDLL 556
Query: 481 GRAGRFDLALKTIHEMP-VEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNY 539
GR GR A + + P + + + L SAC H ++LGE + L+ +P Y
Sbjct: 557 GRVGRLREAYEILQRTPDIREDVGLLSTLFSACHLHKKLDLGEQIGRLLIEKDPDDPSTY 616
Query: 540 ILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSH 592
I+++N++ S W E R + + L K PG S +E+ + FV D+SH
Sbjct: 617 IILSNMYASVKKWDEVRKVRLKIKELGLKKNPGCSWIEVGKRIHPFVVEDKSH 669
Score = 235 bits (599), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 151/489 (30%), Positives = 252/489 (51%), Gaps = 18/489 (3%)
Query: 36 VLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRL 95
+LK C + + GK +H ++ +G Q + + LI++Y C F S++ V + L
Sbjct: 9 LLKTCIDSKYLKQGKLIHQKIVSLGLQNNITLCKSLINLYFSCHLFQSAKLVFQTIENPL 68
Query: 96 RSVVSWNSIISAHSRACLNDEAILVLKEMWVLG-LELSASTFVSVVSGCS----FRQGIS 150
+ WN +++A ++ + E + V + L+ A T+ SV+ CS G
Sbjct: 69 -DITLWNGLMAACTKNFIFIEGLEVFHRLLHFPYLKPDAFTYPSVLKACSGLGRVGYGKM 127
Query: 151 MHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVG 210
+H V K G + + ++++V MYAK +A +FDE+ E + SW +I Y G
Sbjct: 128 VHTHVIKSGFAMDVVVMSSAV-GMYAKCNVFEDAIKLFDEMPERDVASWNNVISCYYQDG 186
Query: 211 NVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDN 270
+A L +M+ PD V +I CA++ +L +H L++SG+ + + +
Sbjct: 187 QPEKALELFEEMKVSGFKPDSVTLTTVISSCARLLDLERGKEIHMELVRSGFALDGFVSS 246
Query: 271 LLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRP 330
LV MY KCG LE+A+ VF+ + K+V W SMI GY+ G + LF+R+ + +RP
Sbjct: 247 ALVDMYGKCGCLEMAKEVFEQIQRKNVVSWNSMIAGYSLKGDSKSCIELFRRMDEEGIRP 306
Query: 331 NEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVF 390
TL++ L AC+ +L GK I YI+ N +E++ V +SLI ++ KCG I A+ VF
Sbjct: 307 TLTTLSSILMACSRSVNLQLGKFIHGYIIRNRVEADIFVNSSLIDLYFKCGNIGSAENVF 366
Query: 391 ERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMV 450
+ +P ++ W+ MI+GY G +AL +F M+ G+KPDA+ +TS+L ACS ++
Sbjct: 367 QNMPKTNVVSWNVMISGYVKVGSYLEALVIFTDMRKA-GVKPDAITFTSVLPACSQLAVL 425
Query: 451 DDGLSFFKSMQSNFGIEPSIE----HYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWA 506
+ G NF IE +E L+D+ + G D AL +++P E W
Sbjct: 426 EKGKEI-----HNFIIESKLEINEVVMGALLDMYAKCGAVDEALHIFNQLP-ERDFVSWT 479
Query: 507 PLLSACMKH 515
+++A H
Sbjct: 480 SMIAAYGSH 488
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 98/365 (26%), Positives = 169/365 (46%), Gaps = 43/365 (11%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI + G + + + M + G+ T +L AC+ ++ GK +H ++++
Sbjct: 279 MIAGYSLKGDSKSCIELFRRMDEEGIRPTLTTLSSILMACSRSVNLQLGKFIHGYIIRNR 338
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+ D FV + LID+Y KC + S+ V MP +VVSWN +IS + + EA+++
Sbjct: 339 VEADIFVNSSLIDLYFKCGNIGSAENVFQNMPK--TNVVSWNVMISGYVKVGSYLEALVI 396
Query: 121 LKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
+M G++ A TF SV+ CS +G +H + + L NE+ + +++ MYA
Sbjct: 397 FTDMRKAGVKPDAITFTSVLPACSQLAVLEKGKEIHNFIIESKLEINEVVMG-ALLDMYA 455
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K G V+EA IF+++ E VSWT++I Y + G EA L +M++ PD V FL
Sbjct: 456 KCGAVDEALHIFNQLPERDFVSWTSMIAAYGSHGQAFEALKLFEKMQQSDAKPDKVTFLA 515
Query: 237 LILGCAQVGNLFLALSMHSLLLKSG--YNNEDPLDNLLVSMYTKCGDLELARRVFDAVLE 294
++ C+ G L+ G Y N+ +A F +E
Sbjct: 516 ILSACSHAG-----------LVDEGCYYFNQ-----------------MIAEYGFKPAVE 547
Query: 295 KSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEI 354
++ +I ++G EA + +R +R + L+T SAC L G++I
Sbjct: 548 H----YSCLIDLLGRVGRLREAYEILQR--TPDIREDVGLLSTLFSACHLHKKLDLGEQI 601
Query: 355 EEYIV 359
++
Sbjct: 602 GRLLI 606
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 67/289 (23%), Positives = 125/289 (43%), Gaps = 34/289 (11%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI GS+ E L ++ M + GV ++ TF VL AC+ + + GK +H+ +++
Sbjct: 380 MISGYVKVGSYLEALVIFTDMRKAGVKPDAITFTSVLPACSQLAVLEKGKEIHNFIIESK 439
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+ + V L+DMY+KC + + +++P R VSW S+I+A+ EA+ +
Sbjct: 440 LEINEVVMGALLDMYAKCGAVDEALHIFNQLPE--RDFVSWTSMIAAYGSHGQAFEALKL 497
Query: 121 LKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGK 180
++M + TF++++S CS GL++ N +++ Y
Sbjct: 498 FEKMQQSDAKPDKVTFLAILSACS------------HAGLVDEGCYYFNQMIAEYGFKPA 545
Query: 181 VNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILG 240
V + D +G VG + EA+ + R + D+ + L
Sbjct: 546 VEHYSCLIDLLG---------------RVGRLREAYEILQ--RTPDIREDVGLLSTLFSA 588
Query: 241 CAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVS-MYTKCGDLELARRV 288
C L L + LL++ + +DP +++S MY + R+V
Sbjct: 589 CHLHKKLDLGEQIGRLLIEK--DPDDPSTYIILSNMYASVKKWDEVRKV 635
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 90/182 (49%), Gaps = 5/182 (2%)
Query: 331 NEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVF 390
+ L + L C + L +GK I + IV GL++N + SLI+++ C AK VF
Sbjct: 2 DTTKLLSLLKTCIDSKYLKQGKLIHQKIVSLGLQNNITLCKSLINLYFSCHLFQSAKLVF 61
Query: 391 ERVPDK-DLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGM 449
+ + + D+ +W+ ++ + + + L +F+++ H LKPDA Y S+L ACS G
Sbjct: 62 QTIENPLDITLWNGLMAACTKNFIFIEGLEVFHRLLHFPYLKPDAFTYPSVLKACSGLGR 121
Query: 450 VDDG-LSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPL 508
V G + ++S F ++ + V + + F+ A+K EMP E W +
Sbjct: 122 VGYGKMVHTHVIKSGFAMDVVVMS--SAVGMYAKCNVFEDAIKLFDEMP-ERDVASWNNV 178
Query: 509 LS 510
+S
Sbjct: 179 IS 180
>gi|2828294|emb|CAA16708.1| putatative protein [Arabidopsis thaliana]
gi|7268714|emb|CAB78921.1| putatative protein [Arabidopsis thaliana]
Length = 1260
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 204/599 (34%), Positives = 335/599 (55%), Gaps = 11/599 (1%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
IR + N E+L + M + G N+FTFP V KACA + + + VH+H++K
Sbjct: 629 QIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARLADVGCCEMVHAHLIKSP 688
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F D FV T +DM+ KC+ + KV + MP R +WN+++S ++ D+A +
Sbjct: 689 FWSDVFVGTATVDMFVKCNSVDYAAKVFERMPER--DATTWNAMLSGFCQSGHTDKAFSL 746
Query: 121 LKEMWVLGLELSASTFVSVVSGCSFRQGI----SMHCCVYKLGLLNNEIPLANSVMSMYA 176
+EM + + + T ++++ SF + + +MH +LG+ + ++ +AN+ +S Y
Sbjct: 747 FREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGV-DVQVTVANTWISTYG 805
Query: 177 KFGKVNEARSIFDEI--GETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVF 234
K G ++ A+ +F+ I G+ ++VSW ++ Y G +AFGL M R PDL F
Sbjct: 806 KCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPDLSTF 865
Query: 235 LNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLE 294
+NL C L +HS + G + + N +SMY+K D AR +FD +
Sbjct: 866 INLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSARLLFDIMTS 925
Query: 295 KSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEI 354
++ WT MI GYA+ G EA+ LF ++K+ +P+ TL + +S C + GSL GK I
Sbjct: 926 RTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETGKWI 985
Query: 355 EEYIVLNGLE-SNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGM 413
+ + G + N + +LI M+SKCG I++A+++F+ P+K + W+ MI GYA++G+
Sbjct: 986 DARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTPEKTVVTWTTMIAGYALNGI 1045
Query: 414 GDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHY 473
+AL LF KM ++ KP+ + + ++L AC+HSG ++ G +F M+ + I P ++HY
Sbjct: 1046 FLEALKLFSKMIDLD-YKPNHITFLAVLQACAHSGSLEKGWEYFHIMKQVYNISPGLDHY 1104
Query: 474 LCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNP 533
C+VDLLGR G+ + AL+ I M + A +W LL+AC H NV++ E AA++L L P
Sbjct: 1105 SCMVDLLGRKGKLEEALELIRNMSAKPDAGIWGALLNACKIHRNVKIAEQAAESLFNLEP 1164
Query: 534 GSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSH 592
Y+ MAN++ +AGMW A R +M R + K PG S ++++G F G+ H
Sbjct: 1165 QMAAPYVEMANIYAAAGMWDGFARIRSIMKQRNIKKYPGESVIQVNGKNHSFTVGEHGH 1223
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 69/289 (23%), Positives = 138/289 (47%), Gaps = 4/289 (1%)
Query: 185 RSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQV 244
R ++ G +S+ +W I VN + E+ L +M+R P+ F + CA++
Sbjct: 612 RRLYRISGLSSVNAWNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARL 671
Query: 245 GNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMI 304
++ +H+ L+KS + ++ + V M+ KC ++ A +VF+ + E+ W +M+
Sbjct: 672 ADVGCCEMVHAHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAML 731
Query: 305 GGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLE 364
G+ Q G+ +A +LF+ + + P+ T+ T + + + SL + + + G++
Sbjct: 732 SGFCQSGHTDKAFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVD 791
Query: 365 SNRQVQTSLIHMFSKCGRINKAKEVFERVP--DKDLAVWSAMINGYAIHGMGDQALNLFY 422
V + I + KCG ++ AK VFE + D+ + W++M Y++ G A L+
Sbjct: 792 VQVTVANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYC 851
Query: 423 KMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIE 471
M E KPD + ++ ++C + + G S + G + IE
Sbjct: 852 LMLREE-FKPDLSTFINLAASCQNPETLTQG-RLIHSHAIHLGTDQDIE 898
>gi|225423551|ref|XP_002274884.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03380,
mitochondrial [Vitis vinifera]
gi|147818711|emb|CAN65040.1| hypothetical protein VITISV_009460 [Vitis vinifera]
Length = 700
Score = 384 bits (985), Expect = e-104, Method: Compositional matrix adjust.
Identities = 218/587 (37%), Positives = 331/587 (56%), Gaps = 12/587 (2%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHG-NSFTFPLVLKACANINSIWDGKRVHSHVLKV 59
MIR N S+ E + Y++ L+ ++ ++ F +VLKAC+ + +G+++H ++KV
Sbjct: 108 MIRWYFLNDSYSEIVQFYNTRLRKCLNEYDNVVFSIVLKACSELRETDEGRKLHCQIVKV 167
Query: 60 GFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAIL 119
G D+FV TGL+DMY+KC + SR+V DE + R+VV W S+I + + E ++
Sbjct: 168 G-SPDSFVLTGLVDMYAKCREVEDSRRVFDE--ILDRNVVCWTSMIVGYVQNDCLKEGLV 224
Query: 120 VLKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMY 175
+ M +E + T S+V+ C+ QG +H V K G N L ++ +Y
Sbjct: 225 LFNRMREGLVEGNQYTLGSLVTACTKLGALHQGKWVHGYVIKSGFDLNSF-LVTPLLDLY 283
Query: 176 AKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFL 235
K G + +A S+FDE+ +VSWT +I GY G EA L R + P+ V
Sbjct: 284 FKCGDIRDAFSVFDELSTIDLVSWTAMIVGYAQRGYPREALKLFTDERWKDLLPNTVTTS 343
Query: 236 NLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEK 295
+++ CAQ G+L + S+H L +K G + + +N LV MY KC + AR VF+ V +K
Sbjct: 344 SVLSACAQTGSLNMGRSVHCLGIKLG-SEDATFENALVDMYAKCHMIGDARYVFETVFDK 402
Query: 296 SVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIE 355
V W S+I GY Q GY EA+ LF ++ SV P+ TL + LSACA +G+ G +
Sbjct: 403 DVIAWNSIISGYTQNGYAYEALELFDQMRSDSVYPDAITLVSVLSACASVGAYRVGSSLH 462
Query: 356 EYIVLNGLESNR-QVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMG 414
Y + GL S V T+L++ ++KCG A+ +F+ + +K+ WSAMI GY I G
Sbjct: 463 GYAIKAGLLSGSVYVGTALLNFYAKCGDAESARVIFDEMGEKNTITWSAMIGGYGIQGDC 522
Query: 415 DQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYL 474
++L LF M E L+P+ V++T+ILSACSHSGM+ +G +F +M + PS++HY
Sbjct: 523 SRSLELFGDMLK-EKLEPNEVIFTTILSACSHSGMLGEGWRYFNTMCQVYNFVPSMKHYA 581
Query: 475 CLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPG 534
C+VDLL RAGR + AL I ++P++ + L C H +LGE A + +L L+P
Sbjct: 582 CMVDLLARAGRLEEALDFIEKIPIQPDVSLLGAFLHGCRLHSRFDLGEVAVRRMLELHPD 641
Query: 535 STGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGS 581
Y+LM+NL+ S G W +A LM R L K PGWS V+I+ S
Sbjct: 642 KACYYVLMSNLYASEGRWSQANQVMELMKQRGLAKLPGWSLVDIETS 688
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 101/296 (34%), Positives = 163/296 (55%), Gaps = 3/296 (1%)
Query: 161 LNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCN 220
L+ ++ ++S+Y FG V AR +FD I + SW +I Y + +E N
Sbjct: 67 LSEDLLCETKLVSLYGSFGHVECARLMFDRIRNPDLYSWKVMIRWYFLNDSYSEIVQFYN 126
Query: 221 -QMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKC 279
++R+ D VVF ++ C+++ +H ++K G + L LV MY KC
Sbjct: 127 TRLRKCLNEYDNVVFSIVLKACSELRETDEGRKLHCQIVKVGSPDSFVLTG-LVDMYAKC 185
Query: 280 GDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTL 339
++E +RRVFD +L+++V WTSMI GY Q E + LF R+ + V N+ TL + +
Sbjct: 186 REVEDSRRVFDEILDRNVVCWTSMIVGYVQNDCLKEGLVLFNRMREGLVEGNQYTLGSLV 245
Query: 340 SACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLA 399
+AC +LG+L +GK + Y++ +G + N + T L+ ++ KCG I A VF+ + DL
Sbjct: 246 TACTKLGALHQGKWVHGYVIKSGFDLNSFLVTPLLDLYFKCGDIRDAFSVFDELSTIDLV 305
Query: 400 VWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLS 455
W+AMI GYA G +AL LF + + L P+ V +S+LSAC+ +G ++ G S
Sbjct: 306 SWTAMIVGYAQRGYPREALKLFTD-ERWKDLLPNTVTTSSVLSACAQTGSLNMGRS 360
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 104/203 (51%), Gaps = 5/203 (2%)
Query: 253 MHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGY 312
+H+LL+ G + + + LVS+Y G +E AR +FD + ++ W MI Y
Sbjct: 58 IHALLVVHGLSEDLLCETKLVSLYGSFGHVECARLMFDRIRNPDLYSWKVMIRWYFLNDS 117
Query: 313 PSEAVNLFK-RLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQT 371
SE V + RL K + + L AC+EL +G+++ IV G + V T
Sbjct: 118 YSEIVQFYNTRLRKCLNEYDNVVFSIVLKACSELRETDEGRKLHCQIVKVG-SPDSFVLT 176
Query: 372 SLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGL- 430
L+ M++KC + ++ VF+ + D+++ W++MI GY + + L LF +M+ EGL
Sbjct: 177 GLVDMYAKCREVEDSRRVFDEILDRNVVCWTSMIVGYVQNDCLKEGLVLFNRMR--EGLV 234
Query: 431 KPDAVVYTSILSACSHSGMVDDG 453
+ + S+++AC+ G + G
Sbjct: 235 EGNQYTLGSLVTACTKLGALHQG 257
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 58/116 (50%), Gaps = 5/116 (4%)
Query: 339 LSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDL 398
L C + SL K I +V++GL + +T L+ ++ G + A+ +F+R+ + DL
Sbjct: 46 LGICKTVSSLRK---IHALLVVHGLSEDLLCETKLVSLYGSFGHVECARLMFDRIRNPDL 102
Query: 399 AVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKP-DAVVYTSILSACSHSGMVDDG 453
W MI Y ++ + + FY + + L D VV++ +L ACS D+G
Sbjct: 103 YSWKVMIRWYFLNDSYSEIVQ-FYNTRLRKCLNEYDNVVFSIVLKACSELRETDEG 157
>gi|302771271|ref|XP_002969054.1| hypothetical protein SELMODRAFT_90563 [Selaginella moellendorffii]
gi|300163559|gb|EFJ30170.1| hypothetical protein SELMODRAFT_90563 [Selaginella moellendorffii]
Length = 696
Score = 383 bits (984), Expect = e-103, Method: Compositional matrix adjust.
Identities = 200/609 (32%), Positives = 351/609 (57%), Gaps = 20/609 (3%)
Query: 21 MLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSD 80
M + G+ + F ++ AC + ++ +G+R+H H++ GF+ D ++T L+ MY+KC
Sbjct: 1 MEERGIVADKFIVTSLVAACTKLQALEEGRRLHEHLIITGFRTDIPLETALLQMYAKCGS 60
Query: 81 FVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVV 140
+++V + M ++ + +W+SIISA++RA + A+++ + M G+E + TF +
Sbjct: 61 LDDAKRVFEGMEIK--DLFAWSSIISAYARAGRGEMAVVLYRRMIAEGVEPNVVTFACAL 118
Query: 141 SGCSFRQGISMHCCVYKLGLLNNEIP----LANSVMSMYAKFGKVNEARSIFDEIGETSI 196
GC+ G++ +++ +L +++P L +S+++MY K ++ EAR +F+ + ++
Sbjct: 119 GGCASVAGLADGRAIHQR-ILASKVPQDDVLQDSLLNMYLKCDEMVEARKVFEGMKARNV 177
Query: 197 VSWTTIIGGYVNVGNVNEAFGLCNQMRRM-SVTPDLVVFLNLILGCAQVGNLFLALSMHS 255
S+T +I YV G EA L ++M ++ ++ P+ F ++ +GNL +H
Sbjct: 178 RSYTAMISAYVQAGEHAEALELFSRMSKVEAIEPNAYTFATILGAVEGLGNLEKGRKVHR 237
Query: 256 LLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSE 315
L G++ + N LV+MY KCG AR+VFD++ ++V WTSMI YAQ G P E
Sbjct: 238 HLASRGFDTNVVVQNALVTMYGKCGSPVEARKVFDSMTARNVISWTSMIAAYAQHGNPQE 297
Query: 316 AVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIH 375
A+NLFKR+ V P+ + ++ L+ACA LG+L +G+EI +V L S Q++TSL+
Sbjct: 298 ALNLFKRM---DVEPSGVSFSSALNACALLGALDEGREIHHRVVEAHLASP-QMETSLLS 353
Query: 376 MFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAV 435
M+++CG ++ A+ VF R+ +D +AMI + HG QAL ++ +M+ EG+ D +
Sbjct: 354 MYARCGSLDDARRVFNRMKTRDAFSCNAMIAAFTQHGRKKQALRIYRRMEQ-EGIPADGI 412
Query: 436 VYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHE 495
+ S+L ACSH+ +V D FF+S+ + G+ P +EHYLC+VD+LGR+GR A + +
Sbjct: 413 TFVSVLVACSHTSLVADCRDFFQSLVMDHGVVPLVEHYLCMVDVLGRSGRLGDAEELVET 472
Query: 496 MPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEA 555
MP + A W LLS C +H ++ GE AA+ + L P T Y+ ++N++ +A + +A
Sbjct: 473 MPYQTDAVAWMTLLSGCKRHGDLNRGERAARKVFELAPAETLPYVFLSNMYAAAKRFDDA 532
Query: 556 ATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKELHIKLLE---- 611
R M++R +T S +EID + +F +G R +T++ + LLE
Sbjct: 533 RRVRKEMEERGVTTPVAVSYIEIDNELHMFTSGGRDEQQEGHDGRTMERVRSLLLELLEP 592
Query: 612 ---AGYIAE 617
AGY+ +
Sbjct: 593 MKQAGYVPD 601
Score = 192 bits (487), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 128/476 (26%), Positives = 236/476 (49%), Gaps = 22/476 (4%)
Query: 9 GSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQ 68
G E + Y M+ GV N TF L CA++ + DG+ +H +L QD +Q
Sbjct: 90 GRGEMAVVLYRRMIAEGVEPNVVTFACALGGCASVAGLADGRAIHQRILASKVPQDDVLQ 149
Query: 69 TGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEM-WVL 127
L++MY KC + V +RKV + M + R+V S+ ++ISA+ +A + EA+ + M V
Sbjct: 150 DSLLNMYLKCDEMVEARKVFEGM--KARNVRSYTAMISAYVQAGEHAEALELFSRMSKVE 207
Query: 128 GLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNE 183
+E +A TF +++ + +G +H + G N + + N++++MY K G E
Sbjct: 208 AIEPNAYTFATILGAVEGLGNLEKGRKVHRHLASRGFDTN-VVVQNALVTMYGKCGSPVE 266
Query: 184 ARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQ 243
AR +FD + +++SWT++I Y GN EA L +RM V P V F + + CA
Sbjct: 267 ARKVFDSMTARNVISWTSMIAAYAQHGNPQEALNL---FKRMDVEPSGVSFSSALNACAL 323
Query: 244 VGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSM 303
+G L +H ++++ + ++ L+SMY +CG L+ ARRVF+ + + F +M
Sbjct: 324 LGALDEGREIHHRVVEAHLASPQ-METSLLSMYARCGSLDDARRVFNRMKTRDAFSCNAM 382
Query: 304 IGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLN-G 362
I + Q G +A+ +++R+ + + + T + L AC+ ++ ++ + +V++ G
Sbjct: 383 IAAFTQHGRKKQALRIYRRMEQEGIPADGITFVSVLVACSHTSLVADCRDFFQSLVMDHG 442
Query: 363 LESNRQVQTSLIHMFSKCGRINKAKEVFERVP-DKDLAVWSAMINGYAIHG---MGDQAL 418
+ + ++ + + GR+ A+E+ E +P D W +++G HG G++A
Sbjct: 443 VVPLVEHYLCMVDVLGRSGRLGDAEELVETMPYQTDAVAWMTLLSGCKRHGDLNRGERAA 502
Query: 419 NLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYL 474
+++ E L V+ S + A + DD K M+ P Y+
Sbjct: 503 RKVFELAPAETL---PYVFLSNMYAAAKR--FDDARRVRKEMEERGVTTPVAVSYI 553
>gi|356569698|ref|XP_003553033.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Glycine max]
Length = 824
Score = 383 bits (984), Expect = e-103, Method: Compositional matrix adjust.
Identities = 214/628 (34%), Positives = 361/628 (57%), Gaps = 14/628 (2%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQ-TGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKV 59
M+ G + +++ + +L +GV + +TFP VLKAC S+ DG+++H VLK+
Sbjct: 120 MVSAYVRRGRYRDSMDCVTELLSLSGVRPDFYTFPPVLKACL---SLADGEKMHCWVLKM 176
Query: 60 GFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAIL 119
GF+ D +V LI +YS+ + KV +MPVR V SWN++IS + EA+
Sbjct: 177 GFEHDVYVAASLIHLYSRFGAVEVAHKVFVDMPVR--DVGSWNAMISGFCQNGNVAEALR 234
Query: 120 VLKEMWVLGLELSASTFVSVVSGCSFRQ----GISMHCCVYKLGLLNNEIPLANSVMSMY 175
VL M +++ T S++ C+ G+ +H V K GL +++ ++N++++MY
Sbjct: 235 VLDRMKTEEVKMDTVTVSSMLPICAQSNDVVGGVLVHLYVIKHGL-ESDVFVSNALINMY 293
Query: 176 AKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFL 235
+KFG++ +A+ +FD + +VSW +II Y + A G +M + + PDL+ +
Sbjct: 294 SKFGRLQDAQRVFDGMEVRDLVSWNSIIAAYEQNDDPVTALGFFKEMLFVGMRPDLLTVV 353
Query: 236 NLILGCAQVGNLFLALSMHSLLLKSGYNNED-PLDNLLVSMYTKCGDLELARRVFDAVLE 294
+L Q+ + + ++H +++ + D + N LV+MY K G ++ AR VF+ +
Sbjct: 354 SLASIFGQLSDRRIGRAVHGFVVRCRWLEVDIVIGNALVNMYAKLGSIDCARAVFEQLPS 413
Query: 295 KSVFLWTSMIGGYAQLGYPSEAVNLFKRLLK-TSVRPNEATLATTLSACAELGSLSKGKE 353
+ V W ++I GYAQ G SEA++ + + + ++ PN+ T + L A + +G+L +G +
Sbjct: 414 RDVISWNTLITGYAQNGLASEAIDAYNMMEEGRTIVPNQGTWVSILPAYSHVGALQQGMK 473
Query: 354 IEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGM 413
I ++ N L + V T LI M+ KCGR+ A +F +P + W+A+I+ IHG
Sbjct: 474 IHGRLIKNCLFLDVFVATCLIDMYGKCGRLEDAMSLFYEIPQETSVPWNAIISSLGIHGH 533
Query: 414 GDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHY 473
G++AL LF M+ +G+K D + + S+LSACSHSG+VD+ F +MQ + I+P+++HY
Sbjct: 534 GEKALQLFKDMR-ADGVKADHITFVSLLSACSHSGLVDEAQWCFDTMQKEYRIKPNLKHY 592
Query: 474 LCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNP 533
C+VDL GRAG + A + MP++ A +W LL+AC H N ELG +A+ LL ++
Sbjct: 593 GCMVDLFGRAGYLEKAYNLVSNMPIQADASIWGTLLAACRIHGNAELGTFASDRLLEVDS 652
Query: 534 GSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHH 593
+ G Y+L++N++ + G W+ A R L DR L K PGWS V + V+VF AG++SH
Sbjct: 653 ENVGYYVLLSNIYANVGKWEGAVKVRSLARDRGLRKTPGWSSVVVGSVVEVFYAGNQSHP 712
Query: 594 LSVDIRKTLKELHIKLLEAGYIAEADIV 621
+I + L+ L+ K+ GY+ + V
Sbjct: 713 QCAEIYEELRVLNAKMKSLGYVPDYSFV 740
Score = 233 bits (593), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 149/535 (27%), Positives = 277/535 (51%), Gaps = 20/535 (3%)
Query: 33 FPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMP 92
F LV ++C NIN K++H+ +L +G QD + T L+ +Y+ D S
Sbjct: 54 FNLVFRSCTNINV---AKQLHALLLVLGKAQDVVLLTQLVTLYATLGDLSLSSTTFKH-- 108
Query: 93 VRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVL-GLELSASTFVSVVSGC-SFRQGIS 150
++ +++ SWNS++SA+ R +++ + E+ L G+ TF V+ C S G
Sbjct: 109 IQRKNIFSWNSMVSAYVRRGRYRDSMDCVTELLSLSGVRPDFYTFPPVLKACLSLADGEK 168
Query: 151 MHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVG 210
MHC V K+G +++ +A S++ +Y++FG V A +F ++ + SW +I G+ G
Sbjct: 169 MHCWVLKMG-FEHDVYVAASLIHLYSRFGAVEVAHKVFVDMPVRDVGSWNAMISGFCQNG 227
Query: 211 NVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDN 270
NV EA + ++M+ V D V +++ CAQ ++ + +H ++K G ++ + N
Sbjct: 228 NVAEALRVLDRMKTEEVKMDTVTVSSMLPICAQSNDVVGGVLVHLYVIKHGLESDVFVSN 287
Query: 271 LLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRP 330
L++MY+K G L+ A+RVFD + + + W S+I Y Q P A+ FK +L +RP
Sbjct: 288 ALINMYSKFGRLQDAQRVFDGMEVRDLVSWNSIIAAYEQNDDPVTALGFFKEMLFVGMRP 347
Query: 331 NEATLATTLSACAELGSLSKGKEIEEYIV-LNGLESNRQVQTSLIHMFSKCGRINKAKEV 389
+ T+ + S +L G+ + ++V LE + + +L++M++K G I+ A+ V
Sbjct: 348 DLLTVVSLASIFGQLSDRRIGRAVHGFVVRCRWLEVDIVIGNALVNMYAKLGSIDCARAV 407
Query: 390 FERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGM 449
FE++P +D+ W+ +I GYA +G+ +A++ + M+ + P+ + SIL A SH G
Sbjct: 408 FEQLPSRDVISWNTLITGYAQNGLASEAIDAYNMMEEGRTIVPNQGTWVSILPAYSHVGA 467
Query: 450 VDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLL 509
+ G+ + N + + CL+D+ G+ GR + A+ +E+P E W ++
Sbjct: 468 LQQGMKIHGRLIKN-CLFLDVFVATCLIDMYGKCGRLEDAMSLFYEIPQETSVP-WNAII 525
Query: 510 SACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDD 564
S+ H + E K++ G ++I +L + A + GL+D+
Sbjct: 526 SSLGIHGHGEKALQLFKDMRA--DGVKADHITFVSLLS-------ACSHSGLVDE 571
>gi|413919600|gb|AFW59532.1| hypothetical protein ZEAMMB73_249815 [Zea mays]
Length = 886
Score = 383 bits (984), Expect = e-103, Method: Compositional matrix adjust.
Identities = 220/683 (32%), Positives = 351/683 (51%), Gaps = 64/683 (9%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
++R G + + ML+ G + FT P LKAC + S G+ +H + G
Sbjct: 120 LVREHIKEGHLDRAIGVSCRMLRAGTKPDHFTLPYALKACGELPSYCCGRALHGLICCNG 179
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVR-LRSVVSWNSIISAHSRACLNDEAIL 119
F+ + FV L+ MYS+C + V DE+ + + V+SWNSI++AH + A+
Sbjct: 180 FESNVFVCNALVAMYSRCGSLEDASLVFDEITRKGIDDVISWNSIVAAHVKGSNPRTALE 239
Query: 120 VLKEMWVLGLELSAS------TFVSVVSGCSFRQGISMHCCVYKLGLLNNEIP---LANS 170
+ EM ++ E + + + V+++ C+ + + ++ + N + N+
Sbjct: 240 LFSEMSMIVHEKATNERSDIISIVNILPACASLKALPQIKEIHSYAIRNGTFADAFVCNA 299
Query: 171 VMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVT-- 228
++ YAK G +N+A +F+ + +VSW ++ GY GN AF L MR+ ++
Sbjct: 300 LIDTYAKCGSMNDAVKVFNVMEFKDVVSWNAMVTGYTQSGNFGAAFELFENMRKENIPLD 359
Query: 229 ---------------------------------PDLVVFLNLILGCAQVGNLFLALSMHS 255
P+ V ++L+ CA +G L + +H+
Sbjct: 360 VITWSAVIAGYAQRGCSQEALDAFQQMILDGSEPNSVTIISLLSACASLGALSQGMEIHA 419
Query: 256 LLLKS------------GYNNEDPLDNLLVSMYTKCGDLELARRVFDAV--LEKSVFLWT 301
LK G + + N L+ MY+KC + AR +FD++ E++V WT
Sbjct: 420 YSLKKCLLSLDNDFGGDGDGEDLMVYNALIDMYSKCRSFKAARSIFDSIPRRERNVVTWT 479
Query: 302 SMIGGYAQLGYPSEAVNLFKRLLKT--SVRPNEATLATTLSACAELGSLSKGKEIEEYIV 359
MIGGYAQ G ++A+ +F ++ +V PN T++ L ACA L +L GK+I Y+
Sbjct: 480 VMIGGYAQYGDSNDALKIFSEMISKPYAVAPNAYTISCILMACAHLAALRMGKQIHAYVT 539
Query: 360 LNGL--ESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQA 417
+ S V LI M+SKCG ++ A+ VF+ +P ++ W++M++GY +HG G +A
Sbjct: 540 RHHEYEPSVYFVANCLIDMYSKCGDVDTARNVFDSMPKRNEVSWTSMMSGYGMHGRGKEA 599
Query: 418 LNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLV 477
L++F KMQ G PD + + +L ACSHSGMVD GL++F M+ ++ + S EHY C++
Sbjct: 600 LDIFDKMQKA-GFVPDDISFLVLLYACSHSGMVDQGLNYFDIMRRDYDVVASAEHYACVI 658
Query: 478 DLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTG 537
DLL R GR D A KTI EMP+E A +W LLSAC H NVEL EYA L+ + + G
Sbjct: 659 DLLARCGRLDKAWKTIQEMPMEPSAVIWVALLSACRVHSNVELAEYALNKLVNMKAENDG 718
Query: 538 NYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVD 597
+Y L++N++ +A WK+ A R LM + K PG S V+ F GDRSH LS +
Sbjct: 719 SYTLISNIYANARRWKDVARIRQLMKKSGIKKRPGCSWVQGKKGTASFFVGDRSHPLSPE 778
Query: 598 IRKTLKELHIKLLEAGYIAEADI 620
I L+ L ++ GY+ E +
Sbjct: 779 IYSLLERLIGRIKVMGYVPETNF 801
Score = 142 bits (358), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 85/312 (27%), Positives = 154/312 (49%), Gaps = 11/312 (3%)
Query: 167 LANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMS 226
L V++ Y G +A S+ + + + V W ++ ++ G+++ A G+ +M R
Sbjct: 85 LGTGVVASYLACGATKDALSVLERVTPSPAVWWNLLVREHIKEGHLDRAIGVSCRMLRAG 144
Query: 227 VTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELAR 286
PD + C ++ + ++H L+ +G+ + + N LV+MY++CG LE A
Sbjct: 145 TKPDHFTLPYALKACGELPSYCCGRALHGLICCNGFESNVFVCNALVAMYSRCGSLEDAS 204
Query: 287 RVFDAVLEK---SVFLWTSMIGGYAQLGYPSEAVNLFKRL------LKTSVRPNEATLAT 337
VFD + K V W S++ + + P A+ LF + T+ R + ++
Sbjct: 205 LVFDEITRKGIDDVISWNSIVAAHVKGSNPRTALELFSEMSMIVHEKATNERSDIISIVN 264
Query: 338 TLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKD 397
L ACA L +L + KEI Y + NG ++ V +LI ++KCG +N A +VF + KD
Sbjct: 265 ILPACASLKALPQIKEIHSYAIRNGTFADAFVCNALIDTYAKCGSMNDAVKVFNVMEFKD 324
Query: 398 LAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFF 457
+ W+AM+ GY G A LF M+ E + D + ++++++ + G + L F
Sbjct: 325 VVSWNAMVTGYTQSGNFGAAFELFENMRK-ENIPLDVITWSAVIAGYAQRGCSQEALDAF 383
Query: 458 KSMQSNFGIEPS 469
+ M + G EP+
Sbjct: 384 QQMILD-GSEPN 394
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 110/247 (44%), Gaps = 17/247 (6%)
Query: 262 YNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFK 321
Y + L +V+ Y CG + A V + V W ++ + + G+ A+ +
Sbjct: 79 YVSPKSLGTGVVASYLACGATKDALSVLERVTPSPAVWWNLLVREHIKEGHLDRAIGVSC 138
Query: 322 RLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCG 381
R+L+ +P+ TL L AC EL S G+ + I NG ESN V +L+ M+S+CG
Sbjct: 139 RMLRAGTKPDHFTLPYALKACGELPSYCCGRALHGLICCNGFESNVFVCNALVAMYSRCG 198
Query: 382 RINKAKEVFERVPDK---DLAVWSAMINGYAIHGMGDQALNLFYKM-----QHVEGLKPD 433
+ A VF+ + K D+ W++++ + AL LF +M + + D
Sbjct: 199 SLEDASLVFDEITRKGIDDVISWNSIVAAHVKGSNPRTALELFSEMSMIVHEKATNERSD 258
Query: 434 AVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSI--EHYLC--LVDLLGRAGRFDLA 489
+ +IL AC+ L K + S + I + ++C L+D + G + A
Sbjct: 259 IISIVNILPACASL----KALPQIKEIHS-YAIRNGTFADAFVCNALIDTYAKCGSMNDA 313
Query: 490 LKTIHEM 496
+K + M
Sbjct: 314 VKVFNVM 320
>gi|225455746|ref|XP_002268440.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like [Vitis vinifera]
Length = 881
Score = 383 bits (983), Expect = e-103, Method: Compositional matrix adjust.
Identities = 216/624 (34%), Positives = 347/624 (55%), Gaps = 18/624 (2%)
Query: 6 TNNGSFEETLSTYSSMLQTGVHGNSF-----TFPLVLKACANINSIWDGKRVHSHVLKVG 60
+ NG +E+ + + ML V SF T VL CA I G VH +K+G
Sbjct: 178 SENGFLQESFNAFREML---VGEESFVPDVATLVTVLPVCAGEEDIEKGMAVHGLAVKLG 234
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
++ V LIDMYSKC F+S ++L + + +++VSWNS+I ++R +
Sbjct: 235 LNEELMVNNSLIDMYSKCR-FLSEAQLLFDKNDK-KNIVSWNSMIGGYAREEDVCRTFYL 292
Query: 121 LKEMWVLGLELSASTF--VSVVSGCSFRQGIS----MHCCVYKLGLLNNEIPLANSVMSM 174
L++M ++ A F ++V+ C R + +H ++ GL +NE+ +AN+ ++
Sbjct: 293 LQKMQTEDAKMKADEFTILNVLPVCLERSELQSLKELHGYSWRHGLQSNEL-VANAFIAA 351
Query: 175 YAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVF 234
Y + G + + +FD + ++ SW ++ GY + +A L QM + PD
Sbjct: 352 YTRCGALCSSERVFDLMDTKTVSSWNALLCGYAQNSDPRKALDLYLQMTDSGLDPDWFTI 411
Query: 235 LNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLE 294
+L+L C+++ +L +H L++G + + L+S+Y CG A+ +FD +
Sbjct: 412 GSLLLACSRMKSLHYGEEIHGFALRNGLAVDPFIGISLLSLYICCGKPFAAQVLFDGMEH 471
Query: 295 KSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEI 354
+S+ W MI GY+Q G P EA+NLF+++L ++P E + AC++L +L GKE+
Sbjct: 472 RSLVSWNVMIAGYSQNGLPDEAINLFRQMLSDGIQPYEIAIMCVCGACSQLSALRLGKEL 531
Query: 355 EEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMG 414
+ + L + V +S+I M++K G I ++ +F+R+ +KD+A W+ +I GY IHG G
Sbjct: 532 HCFALKAHLTEDIFVSSSIIDMYAKGGCIGLSQRIFDRLREKDVASWNVIIAGYGIHGRG 591
Query: 415 DQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYL 474
+AL LF KM + GLKPD +T IL ACSH+G+V+DGL +F M + IEP +EHY
Sbjct: 592 KEALELFEKMLRL-GLKPDDFTFTGILMACSHAGLVEDGLEYFNQMLNLHNIEPKLEHYT 650
Query: 475 CLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPG 534
C+VD+LGRAGR D AL+ I EMP + +++W+ LLS+C H N+ LGE A LL L P
Sbjct: 651 CVVDMLGRAGRIDDALRLIEEMPGDPDSRIWSSLLSSCRIHGNLGLGEKVANKLLELEPE 710
Query: 535 STGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHL 594
NY+L++NLF +G W + RG M D L K+ G S +E+ G V F+ GD
Sbjct: 711 KPENYVLISNLFAGSGKWDDVRRVRGRMKDIGLQKDAGCSWIEVGGKVHNFLIGDEMLPE 770
Query: 595 SVDIRKTLKELHIKLLEAGYIAEA 618
++R+T + L +K+ GY +
Sbjct: 771 LEEVRETWRRLEVKISSIGYTPDT 794
Score = 231 bits (589), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 143/451 (31%), Positives = 244/451 (54%), Gaps = 15/451 (3%)
Query: 6 TNNGSFEETLSTYSSMLQTGVHG-NSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQD 64
T N FE+ +S +S ++ H ++FT P V+KACA + + G+ +H K+ D
Sbjct: 76 TRNELFEDAMSIFSELISVTEHKPDNFTLPCVIKACAGLLDLGLGQIIHGMATKMDLVSD 135
Query: 65 AFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEM 124
FV LI MY KC + KV + MP R++VSWNSII S E+ +EM
Sbjct: 136 VFVGNALIAMYGKCGLVEEAVKVFEHMPE--RNLVSWNSIICGFSENGFLQESFNAFREM 193
Query: 125 WVLGLE---LSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAK 177
V G E +T V+V+ C+ +G+++H KLG LN E+ + NS++ MY+K
Sbjct: 194 LV-GEESFVPDVATLVTVLPVCAGEEDIEKGMAVHGLAVKLG-LNEELMVNNSLIDMYSK 251
Query: 178 FGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRR--MSVTPDLVVFL 235
++EA+ +FD+ + +IVSW ++IGGY +V F L +M+ + D L
Sbjct: 252 CRFLSEAQLLFDKNDKKNIVSWNSMIGGYAREEDVCRTFYLLQKMQTEDAKMKADEFTIL 311
Query: 236 NLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEK 295
N++ C + L +H + G + + + N ++ YT+CG L + RVFD + K
Sbjct: 312 NVLPVCLERSELQSLKELHGYSWRHGLQSNELVANAFIAAYTRCGALCSSERVFDLMDTK 371
Query: 296 SVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIE 355
+V W +++ GYAQ P +A++L+ ++ + + P+ T+ + L AC+ + SL G+EI
Sbjct: 372 TVSSWNALLCGYAQNSDPRKALDLYLQMTDSGLDPDWFTIGSLLLACSRMKSLHYGEEIH 431
Query: 356 EYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGD 415
+ + NGL + + SL+ ++ CG+ A+ +F+ + + L W+ MI GY+ +G+ D
Sbjct: 432 GFALRNGLAVDPFIGISLLSLYICCGKPFAAQVLFDGMEHRSLVSWNVMIAGYSQNGLPD 491
Query: 416 QALNLFYKMQHVEGLKPDAVVYTSILSACSH 446
+A+NLF +M +G++P + + ACS
Sbjct: 492 EAINLFRQMLS-DGIQPYEIAIMCVCGACSQ 521
Score = 192 bits (489), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 129/425 (30%), Positives = 223/425 (52%), Gaps = 20/425 (4%)
Query: 35 LVLKACANINSIWDGKRVHSHV-LKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPV 93
++L+AC I G+R+H V F D + T +I MYS C SR V D++
Sbjct: 3 VLLQACGQRKDIEVGRRLHEMVSASTQFCNDFVLNTRIITMYSMCGSPSDSRMVFDKL-- 60
Query: 94 RLRSVVSWNSIISAHSRACLNDEAILVLKEMW-VLGLELSASTFVSVVSGCS----FRQG 148
R +++ WN+I+SA++R L ++A+ + E+ V + T V+ C+ G
Sbjct: 61 RRKNLFQWNAIVSAYTRNELFEDAMSIFSELISVTEHKPDNFTLPCVIKACAGLLDLGLG 120
Query: 149 ISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVN 208
+H K+ L+ +++ + N++++MY K G V EA +F+ + E ++VSW +II G+
Sbjct: 121 QIIHGMATKMDLV-SDVFVGNALIAMYGKCGLVEEAVKVFEHMPERNLVSWNSIICGFSE 179
Query: 209 VGNVNEAFGLCNQMRRM-----SVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYN 263
G + E+F N R M S PD+ + ++ CA ++ +++H L +K G N
Sbjct: 180 NGFLQESF---NAFREMLVGEESFVPDVATLVTVLPVCAGEEDIEKGMAVHGLAVKLGLN 236
Query: 264 NEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRL 323
E ++N L+ MY+KC L A+ +FD +K++ W SMIGGYA+ L +++
Sbjct: 237 EELMVNNSLIDMYSKCRFLSEAQLLFDKNDKKNIVSWNSMIGGYAREEDVCRTFYLLQKM 296
Query: 324 L--KTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCG 381
++ +E T+ L C E L KE+ Y +GL+SN V + I +++CG
Sbjct: 297 QTEDAKMKADEFTILNVLPVCLERSELQSLKELHGYSWRHGLQSNELVANAFIAAYTRCG 356
Query: 382 RINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSIL 441
+ ++ VF+ + K ++ W+A++ GYA + +AL+L+ +M GL PD S+L
Sbjct: 357 ALCSSERVFDLMDTKTVSSWNALLCGYAQNSDPRKALDLYLQMTD-SGLDPDWFTIGSLL 415
Query: 442 SACSH 446
ACS
Sbjct: 416 LACSR 420
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 89/312 (28%), Positives = 158/312 (50%), Gaps = 13/312 (4%)
Query: 163 NEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQM 222
N+ L +++MY+ G +++R +FD++ ++ W I+ Y +A + +++
Sbjct: 32 NDFVLNTRIITMYSMCGSPSDSRMVFDKLRRKNLFQWNAIVSAYTRNELFEDAMSIFSEL 91
Query: 223 RRMSVT---PDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKC 279
+SVT PD +I CA + +L L +H + K ++ + N L++MY KC
Sbjct: 92 --ISVTEHKPDNFTLPCVIKACAGLLDLGLGQIIHGMATKMDLVSDVFVGNALIAMYGKC 149
Query: 280 GDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLL--KTSVRPNEATLAT 337
G +E A +VF+ + E+++ W S+I G+++ G+ E+ N F+ +L + S P+ ATL T
Sbjct: 150 GLVEEAVKVFEHMPERNLVSWNSIICGFSENGFLQESFNAFREMLVGEESFVPDVATLVT 209
Query: 338 TLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKD 397
L CA + KG + V GL V SLI M+SKC +++A+ +F++ K+
Sbjct: 210 VLPVCAGEEDIEKGMAVHGLAVKLGLNEELMVNNSLIDMYSKCRFLSEAQLLFDKNDKKN 269
Query: 398 LAVWSAMINGYAIHGMGDQALNLFYKMQHVEG-LKPDAVVYTSILSACSHSGMVDD---- 452
+ W++MI GYA + L KMQ + +K D ++L C +
Sbjct: 270 IVSWNSMIGGYAREEDVCRTFYLLQKMQTEDAKMKADEFTILNVLPVCLERSELQSLKEL 329
Query: 453 -GLSFFKSMQSN 463
G S+ +QSN
Sbjct: 330 HGYSWRHGLQSN 341
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 118/222 (53%), Gaps = 3/222 (1%)
Query: 237 LILGCAQVGNLFLALSMHSLLLKSG-YNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEK 295
L+ C Q ++ + +H ++ S + N+ L+ +++MY+ CG +R VFD + K
Sbjct: 4 LLQACGQRKDIEVGRRLHEMVSASTQFCNDFVLNTRIITMYSMCGSPSDSRMVFDKLRRK 63
Query: 296 SVFLWTSMIGGYAQLGYPSEAVNLFKRLLK-TSVRPNEATLATTLSACAELGSLSKGKEI 354
++F W +++ Y + +A+++F L+ T +P+ TL + ACA L L G+ I
Sbjct: 64 NLFQWNAIVSAYTRNELFEDAMSIFSELISVTEHKPDNFTLPCVIKACAGLLDLGLGQII 123
Query: 355 EEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMG 414
L S+ V +LI M+ KCG + +A +VFE +P+++L W+++I G++ +G
Sbjct: 124 HGMATKMDLVSDVFVGNALIAMYGKCGLVEEAVKVFEHMPERNLVSWNSIICGFSENGFL 183
Query: 415 DQALNLFYKMQ-HVEGLKPDAVVYTSILSACSHSGMVDDGLS 455
++ N F +M E PD ++L C+ ++ G++
Sbjct: 184 QESFNAFREMLVGEESFVPDVATLVTVLPVCAGEEDIEKGMA 225
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 96/417 (23%), Positives = 176/417 (42%), Gaps = 52/417 (12%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI + NG +E ++ + ML G+ V AC+ ++++ GK +H LK
Sbjct: 480 MIAGYSQNGLPDEAINLFRQMLSDGIQPYEIAIMCVCGACSQLSALRLGKELHCFALKAH 539
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+D FV + +IDMY+K S+++ D + R + V SWN II+ + EA+ +
Sbjct: 540 LTEDIFVSSSIIDMYAKGGCIGLSQRIFDRL--REKDVASWNVIIAGYGIHGRGKEALEL 597
Query: 121 LKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGK 180
++M LGL+ TF ++ CS GL+ + + N +++++ K
Sbjct: 598 FEKMLRLGLKPDDFTFTGILMACS------------HAGLVEDGLEYFNQMLNLHNIEPK 645
Query: 181 VNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILG 240
+ + D +G G +++A L + M PD ++ +L+
Sbjct: 646 LEHYTCVVDMLGRA---------------GRIDDALRL---IEEMPGDPDSRIWSSLLSS 687
Query: 241 CAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVS-MYTKCGDLELARRVF----DAVLEK 295
C GNL L + + LL+ E P + +L+S ++ G + RRV D L+K
Sbjct: 688 CRIHGNLGLGEKVANKLLE--LEPEKPENYVLISNLFAGSGKWDDVRRVRGRMKDIGLQK 745
Query: 296 SVFL-WTSMIG-------GYAQLGYPSEAVNLFKRL-LKTS---VRPNEATLATTLSACA 343
W + G G L E ++RL +K S P+ ++ L
Sbjct: 746 DAGCSWIEVGGKVHNFLIGDEMLPELEEVRETWRRLEVKISSIGYTPDTGSVLHDLEEED 805
Query: 344 ELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAV 400
++G L +G + I L + + + + CG + A + +V ++D+ V
Sbjct: 806 KIGIL-RGHSEKLAISFGLLNTAKGLPVRVYKNLRICGDCHNAAKFISKVVNRDIVV 861
>gi|302812982|ref|XP_002988177.1| hypothetical protein SELMODRAFT_127579 [Selaginella moellendorffii]
gi|300143909|gb|EFJ10596.1| hypothetical protein SELMODRAFT_127579 [Selaginella moellendorffii]
Length = 742
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 207/629 (32%), Positives = 352/629 (55%), Gaps = 21/629 (3%)
Query: 8 NGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFV 67
+G +ETL M Q GV ++ TF L +C + S+ DG R+H V+ + D V
Sbjct: 36 SGQSKETLRALERMRQDGVRPDAVTFITALGSCGDPESLRDGIRIHQMVVDSRLEIDPKV 95
Query: 68 QTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVL 127
L++MY KC +++V +M R R+V+SW+ + AH+ EA+ + M +L
Sbjct: 96 SNALLNMYKKCGSLSHAKRVFAKME-RTRNVISWSIMAGAHALHGNVWEALRHFRFMLLL 154
Query: 128 GLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNE 183
G++ + S V+++S CS + G +H C+ L +E+ +AN+VM+MY + G V E
Sbjct: 155 GIKATKSAMVTILSACSSPALVQDGRMIHSCI-ALSGFESELLVANAVMTMYGRCGAVEE 213
Query: 184 ARSIFDEIGET--SIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGC 241
AR +FD + E +VSW ++ YV+ +A L +RM + PD V +++L+ C
Sbjct: 214 ARKVFDAMDEALRDVVSWNIMLSTYVHNDRGKDAIQL---YQRMQLRPDKVTYVSLLSAC 270
Query: 242 AQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWT 301
+ ++ L +H ++ + N LVSMY KCG AR VFD + ++S+ WT
Sbjct: 271 SSAEDVGLGRVLHKQIVNDELEKNVIVGNALVSMYAKCGSHTEARAVFDKMEQRSIISWT 330
Query: 302 SMIGGYAQLGYPSEAVNLFKRLLK-------TSVRPNEATLATTLSACAELGSLSKGKEI 354
++I Y + +EA +LF+++L+ V+P+ T L+ACA++ +L +GK +
Sbjct: 331 TIISAYVRRRLVAEACHLFQQMLELEKNGSSQRVKPDALAFVTILNACADVSALEQGKMV 390
Query: 355 EEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDK-DLAVWSAMINGYAIHGM 413
E GL S++ V T++++++ KCG I +A+ +F+ V + D+ +W+AMI YA G
Sbjct: 391 SEQAASCGLSSDKAVGTAVVNLYGKCGEIEEARRIFDAVCSRPDVQLWNAMIAVYAQFGQ 450
Query: 414 GDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNF-GIEPSIEH 472
+AL LF++M+ +EG++PD+ + SIL ACSH+G+ D G S+F SM + + + +I+H
Sbjct: 451 SHEALKLFWRME-MEGVRPDSFSFVSILLACSHTGLEDQGKSYFTSMTTEYRNVTRTIQH 509
Query: 473 YLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLN 532
+ C+ DLLGR GR A + + ++PV+ A W LL+AC H +++ + A LL L
Sbjct: 510 FGCVADLLGRGGRLKEAEEFLEKLPVKPDAVAWTSLLAACRNHRDLKRAKEVANKLLRLE 569
Query: 533 PGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSH 592
P Y+ ++N++ W A R M ++ + KE G S +EI + F GD +H
Sbjct: 570 PRCATGYVALSNIYAELQKWHAVAKVRKFMAEQGVKKERGVSTIEIGKYMHDFATGDDAH 629
Query: 593 HLSVDIRKTLKELHIKLLEAGYIAEADIV 621
+ +IR+ L +LH ++ E GY+ + +V
Sbjct: 630 PRNREIREELAKLHSQMKECGYVPDTKMV 658
Score = 176 bits (447), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 113/450 (25%), Positives = 227/450 (50%), Gaps = 20/450 (4%)
Query: 74 MYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSA 133
MY+ C ++ D + R++ SW +++A + + + E + L+ M G+ A
Sbjct: 1 MYAHCDSPGDAKAAFDAL--EQRNLYSWTGLVAAFAISGQSKETLRALERMRQDGVRPDA 58
Query: 134 STFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFD 189
TF++ + C S R GI +H V L + ++N++++MY K G ++ A+ +F
Sbjct: 59 VTFITALGSCGDPESLRDGIRIHQMVVD-SRLEIDPKVSNALLNMYKKCGSLSHAKRVFA 117
Query: 190 EIGET-SIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLF 248
++ T +++SW+ + G + GNV EA M + + + ++ C+ +
Sbjct: 118 KMERTRNVISWSIMAGAHALHGNVWEALRHFRFMLLLGIKATKSAMVTILSACSSPALVQ 177
Query: 249 LALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLE--KSVFLWTSMIGG 306
+HS + SG+ +E + N +++MY +CG +E AR+VFDA+ E + V W M+
Sbjct: 178 DGRMIHSCIALSGFESELLVANAVMTMYGRCGAVEEARKVFDAMDEALRDVVSWNIMLST 237
Query: 307 YAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESN 366
Y +A+ L++R+ +RP++ T + LSAC+ + G+ + + IV + LE N
Sbjct: 238 YVHNDRGKDAIQLYQRM---QLRPDKVTYVSLLSACSSAEDVGLGRVLHKQIVNDELEKN 294
Query: 367 RQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQH 426
V +L+ M++KCG +A+ VF+++ + + W+ +I+ Y + +A +LF +M
Sbjct: 295 VIVGNALVSMYAKCGSHTEARAVFDKMEQRSIISWTTIISAYVRRRLVAEACHLFQQMLE 354
Query: 427 VEG------LKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLL 480
+E +KPDA+ + +IL+AC+ ++ G ++ G+ +V+L
Sbjct: 355 LEKNGSSQRVKPDALAFVTILNACADVSALEQG-KMVSEQAASCGLSSDKAVGTAVVNLY 413
Query: 481 GRAGRFDLALKTIHEMPVEVQAQVWAPLLS 510
G+ G + A + + Q+W +++
Sbjct: 414 GKCGEIEEARRIFDAVCSRPDVQLWNAMIA 443
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 102/372 (27%), Positives = 187/372 (50%), Gaps = 13/372 (3%)
Query: 174 MYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVV 233
MYA +A++ FD + + ++ SWT ++ + G E +MR+ V PD V
Sbjct: 1 MYAHCDSPGDAKAAFDALEQRNLYSWTGLVAAFAISGQSKETLRALERMRQDGVRPDAVT 60
Query: 234 FLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVL 293
F+ + C +L + +H +++ S + + N L++MY KCG L A+RVF A +
Sbjct: 61 FITALGSCGDPESLRDGIRIHQMVVDSRLEIDPKVSNALLNMYKKCGSLSHAKRVF-AKM 119
Query: 294 EKS--VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKG 351
E++ V W+ M G +A G EA+ F+ +L ++ ++ + T LSAC+ + G
Sbjct: 120 ERTRNVISWSIMAGAHALHGNVWEALRHFRFMLLLGIKATKSAMVTILSACSSPALVQDG 179
Query: 352 KEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPD--KDLAVWSAMINGYA 409
+ I I L+G ES V +++ M+ +CG + +A++VF+ + + +D+ W+ M++ Y
Sbjct: 180 RMIHSCIALSGFESELLVANAVMTMYGRCGAVEEARKVFDAMDEALRDVVSWNIMLSTYV 239
Query: 410 IHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPS 469
+ G A+ L+ +MQ L+PD V Y S+LSACS + V G K + N +E +
Sbjct: 240 HNDRGKDAIQLYQRMQ----LRPDKVTYVSLLSACSSAEDVGLGRVLHKQI-VNDELEKN 294
Query: 470 IEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQV-WAPLLSACMKHHNVELGEYAAKNL 528
+ LV + + G A +M E ++ + W ++SA ++ V + + +
Sbjct: 295 VIVGNALVSMYAKCGSHTEARAVFDKM--EQRSIISWTTIISAYVRRRLVAEACHLFQQM 352
Query: 529 LTLNPGSTGNYI 540
L L + +
Sbjct: 353 LELEKNGSSQRV 364
>gi|224077710|ref|XP_002305373.1| predicted protein [Populus trichocarpa]
gi|222848337|gb|EEE85884.1| predicted protein [Populus trichocarpa]
Length = 676
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 214/583 (36%), Positives = 328/583 (56%), Gaps = 10/583 (1%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQT-GVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKV 59
MI+ G + E + + ML + +++T+P V+KAC+ + + G+ +H L
Sbjct: 92 MIKMYIAKGDYFEAMKVFLEMLGSKDCCPDNYTYPFVIKACSELLLVEYGRVLHGLTLVS 151
Query: 60 GFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAIL 119
F FV L+ MY C + +RKV D M + +SVVSWN++I+ + + + A++
Sbjct: 152 KFGSHLFVLNSLLAMYMNCGEVEEARKVFDAM--KEKSVVSWNTMINGYFKNGFANTALV 209
Query: 120 VLKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKL---GLLNNEIPLANSVMSMYA 176
V +M G+E+ ++ VSV+ C + + + + V+ L +L +I ++N+++ MYA
Sbjct: 210 VFNQMVDSGVEIDGASVVSVLPACGYLKELEVGRRVHGLVEEKVLGKKI-VSNALVDMYA 268
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K G ++EAR +FD + E +VSWT++I GY+ G+ A L M+ + P+ V
Sbjct: 269 KCGSMDEARLVFDNMVERDVVSWTSMINGYILNGDAKSALSLFKIMQIEGLRPNSVTIAL 328
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
++L CA + NL +H ++K +E ++ L+ MY KC L L+ VF K
Sbjct: 329 ILLACASLNNLKDGRCLHGWVMKQRLYSEVAVETSLIDMYAKCNCLGLSFSVFTRTSRKK 388
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEE 356
W +++ G +EA+ LFK++L V N AT + L A L L I
Sbjct: 389 TVPWNALLSGCVHNKLATEAIGLFKKMLMEGVEINAATCNSLLPAYGILADLQPVNNINS 448
Query: 357 YIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPD--KDLAVWSAMINGYAIHGMG 414
Y++ +G SN QV TSLI ++SKCG + A ++F +P +D+ VWS +I GY +HG G
Sbjct: 449 YLMRSGFVSNIQVATSLIDIYSKCGSLESAHKIFNTIPVDVQDIFVWSIIIAGYGMHGHG 508
Query: 415 DQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYL 474
+ A++LF +M G+KP+ V +TS+L +CSH+GMVDDGL FK M + P+ +HY
Sbjct: 509 ETAVSLFKQMVQ-SGVKPNDVTFTSVLQSCSHAGMVDDGLYLFKFMLKDHQTIPNDDHYT 567
Query: 475 CLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPG 534
C+VDLLGRAGR D A I MP VW LL AC+ H NVELGE AA+ L L PG
Sbjct: 568 CMVDLLGRAGRMDEAYDLIKTMPFMPGHAVWGALLGACVMHENVELGEVAARWLFELEPG 627
Query: 535 STGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVE 577
+TGNY+L+A L+ + G W++A R MDD L K P S +E
Sbjct: 628 NTGNYVLLAKLYAALGRWEDAENVRQRMDDIGLRKAPAHSLIE 670
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 151/496 (30%), Positives = 251/496 (50%), Gaps = 25/496 (5%)
Query: 36 VLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRL 95
+LK S+ K++H+H++ G +++ L+ Y+ C ++RK+ DE+ R
Sbjct: 27 LLKHYGAAQSLTSTKQLHAHLITSGLLSID-IRSVLVATYAHCGYVHNARKLFDEL--RQ 83
Query: 96 RSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSAS---TFVSVVSGCS----FRQG 148
R + +N +I + EA+ V EM LG + T+ V+ CS G
Sbjct: 84 RGTLLYNFMIKMYIAKGDYFEAMKVFLEM--LGSKDCCPDNYTYPFVIKACSELLLVEYG 141
Query: 149 ISMH--CCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGY 206
+H V K G + + + NS+++MY G+V EAR +FD + E S+VSW T+I GY
Sbjct: 142 RVLHGLTLVSKFG---SHLFVLNSLLAMYMNCGEVEEARKVFDAMKEKSVVSWNTMINGY 198
Query: 207 VNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNED 266
G N A + NQM V D ++++ C + L + +H L++ +
Sbjct: 199 FKNGFANTALVVFNQMVDSGVEIDGASVVSVLPACGYLKELEVGRRVHG-LVEEKVLGKK 257
Query: 267 PLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKT 326
+ N LV MY KCG ++ AR VFD ++E+ V WTSMI GY G A++LFK +
Sbjct: 258 IVSNALVDMYAKCGSMDEARLVFDNMVERDVVSWTSMINGYILNGDAKSALSLFKIMQIE 317
Query: 327 SVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKA 386
+RPN T+A L ACA L +L G+ + +++ L S V+TSLI M++KC + +
Sbjct: 318 GLRPNSVTIALILLACASLNNLKDGRCLHGWVMKQRLYSEVAVETSLIDMYAKCNCLGLS 377
Query: 387 KEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSH 446
VF R K W+A+++G + + +A+ LF KM +EG++ +A S+L A
Sbjct: 378 FSVFTRTSRKKTVPWNALLSGCVHNKLATEAIGLFKKML-MEGVEINAATCNSLLPA--- 433
Query: 447 SGMVDD--GLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQ-AQ 503
G++ D ++ S G +I+ L+D+ + G + A K + +PV+VQ
Sbjct: 434 YGILADLQPVNNINSYLMRSGFVSNIQVATSLIDIYSKCGSLESAHKIFNTIPVDVQDIF 493
Query: 504 VWAPLLSACMKHHNVE 519
VW+ +++ H + E
Sbjct: 494 VWSIIIAGYGMHGHGE 509
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/124 (22%), Positives = 62/124 (50%), Gaps = 1/124 (0%)
Query: 330 PNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEV 389
P + L SL+ K++ +++ +GL S +++ L+ ++ CG ++ A+++
Sbjct: 19 PKTTQYQSLLKHYGAAQSLTSTKQLHAHLITSGLLS-IDIRSVLVATYAHCGYVHNARKL 77
Query: 390 FERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGM 449
F+ + + +++ MI Y G +A+ +F +M + PD Y ++ ACS +
Sbjct: 78 FDELRQRGTLLYNFMIKMYIAKGDYFEAMKVFLEMLGSKDCCPDNYTYPFVIKACSELLL 137
Query: 450 VDDG 453
V+ G
Sbjct: 138 VEYG 141
>gi|356521082|ref|XP_003529187.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Glycine max]
Length = 780
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 207/602 (34%), Positives = 347/602 (57%), Gaps = 9/602 (1%)
Query: 25 GVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSS 84
G N F F +LK +++ VH++V K+G Q DAFV T LID YS C + ++
Sbjct: 99 GYEVNQFVFTTLLKLLVSMDLADTCLSVHAYVYKLGHQADAFVGTALIDAYSVCGNVDAA 158
Query: 85 RKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGC- 143
R+V D + + +VSW +++ ++ +++++L+ +M ++G + T + + C
Sbjct: 159 RQVFD--GIYFKDMVSWTGMVACYAENYCHEDSLLLFCQMRIMGYRPNNFTISAALKSCN 216
Query: 144 ---SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWT 200
+F+ G S+H C K+ + ++ + +++ +Y K G++ EA+ F+E+ + ++ W+
Sbjct: 217 GLEAFKVGKSVHGCALKV-CYDRDLYVGIALLELYTKSGEIAEAQQFFEEMPKDDLIPWS 275
Query: 201 TIIGGYVNVGNVNEAFGLCNQMRRMSVT-PDLVVFLNLILGCAQVGNLFLALSMHSLLLK 259
+I Y EA L +MR+ SV P+ F +++ CA + L L +HS +LK
Sbjct: 276 LMISRYAQSDKSKEALELFCRMRQSSVVVPNNFTFASVLQACASLVLLNLGNQIHSCVLK 335
Query: 260 SGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNL 319
G ++ + N L+ +Y KCG++E + ++F EK+ W ++I GY QLG +A+NL
Sbjct: 336 VGLDSNVFVSNALMDVYAKCGEIENSVKLFTGSTEKNEVAWNTIIVGYVQLGDGEKALNL 395
Query: 320 FKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSK 379
F +L ++P E T ++ L A A L +L G++I + + V SLI M++K
Sbjct: 396 FSNMLGLDIQPTEVTYSSVLRASASLVALEPGRQIHSLTIKTMYNKDSVVANSLIDMYAK 455
Query: 380 CGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTS 439
CGRI+ A+ F+++ +D W+A+I GY+IHG+G +ALNLF MQ KP+ + +
Sbjct: 456 CGRIDDARLTFDKMDKQDEVSWNALICGYSIHGLGMEALNLFDMMQQSNS-KPNKLTFVG 514
Query: 440 ILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVE 499
+LSACS++G++D G + FKSM ++GIEP IEHY C+V LLGR+G+FD A+K I E+P +
Sbjct: 515 VLSACSNAGLLDKGRAHFKSMLQDYGIEPCIEHYTCMVWLLGRSGQFDEAVKLIGEIPFQ 574
Query: 500 VQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATAR 559
VW LL AC+ H N++LG+ A+ +L + P ++L++N++ +A W A R
Sbjct: 575 PSVMVWRALLGACVIHKNLDLGKVCAQRVLEMEPQDDATHVLLSNMYATAKRWDNVAYVR 634
Query: 560 GLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKELHIKLLEAGYIAEAD 619
M +++ KEPG S VE G V F GD SH I L+ L+ K +AGY+ +
Sbjct: 635 KNMKKKKVKKEPGLSWVENQGVVHYFTVGDTSHPNIKLIFAMLEWLYKKTRDAGYVPDCS 694
Query: 620 IV 621
+V
Sbjct: 695 VV 696
Score = 195 bits (495), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 119/418 (28%), Positives = 221/418 (52%), Gaps = 10/418 (2%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
M+ N E++L + M G N+FT LK+C + + GK VH LKV
Sbjct: 176 MVACYAENYCHEDSLLLFCQMRIMGYRPNNFTISAALKSCNGLEAFKVGKSVHGCALKVC 235
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+ +D +V L+++Y+K + +++ +EMP ++ W+ +IS ++++ + EA+ +
Sbjct: 236 YDRDLYVGIALLELYTKSGEIAEAQQFFEEMPK--DDLIPWSLMISRYAQSDKSKEALEL 293
Query: 121 LKEMWVLGLELSAS-TFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMY 175
M + + + TF SV+ C+ G +H CV K+GL +N + ++N++M +Y
Sbjct: 294 FCRMRQSSVVVPNNFTFASVLQACASLVLLNLGNQIHSCVLKVGLDSN-VFVSNALMDVY 352
Query: 176 AKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFL 235
AK G++ + +F E + V+W TII GYV +G+ +A L + M + + P V +
Sbjct: 353 AKCGEIENSVKLFTGSTEKNEVAWNTIIVGYVQLGDGEKALNLFSNMLGLDIQPTEVTYS 412
Query: 236 NLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEK 295
+++ A + L +HSL +K+ YN + + N L+ MY KCG ++ AR FD + ++
Sbjct: 413 SVLRASASLVALEPGRQIHSLTIKTMYNKDSVVANSLIDMYAKCGRIDDARLTFDKMDKQ 472
Query: 296 SVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGK-EI 354
W ++I GY+ G EA+NLF + +++ +PN+ T LSAC+ G L KG+
Sbjct: 473 DEVSWNALICGYSIHGLGMEALNLFDMMQQSNSKPNKLTFVGVLSACSNAGLLDKGRAHF 532
Query: 355 EEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVP-DKDLAVWSAMINGYAIH 411
+ + G+E + T ++ + + G+ ++A ++ +P + VW A++ IH
Sbjct: 533 KSMLQDYGIEPCIEHYTCMVWLLGRSGQFDEAVKLIGEIPFQPSVMVWRALLGACVIH 590
Score = 174 bits (442), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 132/454 (29%), Positives = 229/454 (50%), Gaps = 12/454 (2%)
Query: 49 GKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAH 108
GK +H H+LK G D F Q L++ Y + K+ DEMP L + VS+ ++
Sbjct: 22 GKSLHCHILKHGASLDLFAQNILLNTYVHFGFLEDASKLFDEMP--LTNTVSFVTLAQGF 79
Query: 109 SRACLNDEAILVLKEMWVLGLELSASTFVS----VVSGCSFRQGISMHCCVYKLGLLNNE 164
SR+ A +L ++ G E++ F + +VS +S+H VYKLG +
Sbjct: 80 SRSHQFQRARRLLLRLFREGYEVNQFVFTTLLKLLVSMDLADTCLSVHAYVYKLGHQADA 139
Query: 165 IPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRR 224
+ +++ Y+ G V+ AR +FD I +VSWT ++ Y ++ L QMR
Sbjct: 140 F-VGTALIDAYSVCGNVDAARQVFDGIYFKDMVSWTGMVACYAENYCHEDSLLLFCQMRI 198
Query: 225 MSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLEL 284
M P+ + C + + S+H LK Y+ + + L+ +YTK G++
Sbjct: 199 MGYRPNNFTISAALKSCNGLEAFKVGKSVHGCALKVCYDRDLYVGIALLELYTKSGEIAE 258
Query: 285 ARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTS-VRPNEATLATTLSACA 343
A++ F+ + + + W+ MI YAQ EA+ LF R+ ++S V PN T A+ L ACA
Sbjct: 259 AQQFFEEMPKDDLIPWSLMISRYAQSDKSKEALELFCRMRQSSVVVPNNFTFASVLQACA 318
Query: 344 ELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSA 403
L L+ G +I ++ GL+SN V +L+ +++KCG I + ++F +K+ W+
Sbjct: 319 SLVLLNLGNQIHSCVLKVGLDSNVFVSNALMDVYAKCGEIENSVKLFTGSTEKNEVAWNT 378
Query: 404 MINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFK-SMQS 462
+I GY G G++ALNLF M ++ ++P V Y+S+L A + ++ G ++++
Sbjct: 379 IIVGYVQLGDGEKALNLFSNMLGLD-IQPTEVTYSSVLRASASLVALEPGRQIHSLTIKT 437
Query: 463 NFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEM 496
+ + + + L+D+ + GR D A T +M
Sbjct: 438 MYNKDSVVAN--SLIDMYAKCGRIDDARLTFDKM 469
>gi|356567218|ref|XP_003551818.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g12770-like [Glycine max]
Length = 727
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 202/575 (35%), Positives = 335/575 (58%), Gaps = 9/575 (1%)
Query: 51 RVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSR 110
++H+ ++ G Q + F+ T L++ S +RK+ DE V WN+II ++SR
Sbjct: 74 QIHNRLVISGLQHNGFLMTKLVNGSSNLGQICYARKLFDEFC--YPDVFMWNAIIRSYSR 131
Query: 111 ACLNDEAILVLKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVY----KLGLLNNEIP 166
+ + + + + M G+ TF V+ C+ + C ++ K G +++
Sbjct: 132 NNMYRDTVEMYRWMRWTGVHPDGFTFPYVLKACTELLDFGLSCIIHGQIIKYGF-GSDVF 190
Query: 167 LANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMS 226
+ N ++++YAK G + A+ +FD + +IVSWT+II GY G EA + +QMR
Sbjct: 191 VQNGLVALYAKCGHIGVAKVVFDGLYHRTIVSWTSIISGYAQNGKAVEALRMFSQMRNNG 250
Query: 227 VTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELAR 286
V PD + ++++ V +L S+H ++K G +E L L + Y KCG + +A+
Sbjct: 251 VKPDWIALVSILRAYTDVDDLEQGRSIHGFVIKMGLEDEPALLISLTAFYAKCGLVTVAK 310
Query: 287 RVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELG 346
FD + +V +W +MI GYA+ G+ EAVNLF ++ +++P+ T+ + + A A++G
Sbjct: 311 SFFDQMKTTNVIMWNAMISGYAKNGHAEEAVNLFHYMISRNIKPDSVTVRSAVLASAQVG 370
Query: 347 SLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMIN 406
SL + +++Y+ + S+ V TSLI M++KCG + A+ VF+R DKD+ +WSAMI
Sbjct: 371 SLELAQWMDDYVSKSNYGSDIFVNTSLIDMYAKCGSVEFARRVFDRNSDKDVVMWSAMIM 430
Query: 407 GYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGI 466
GY +HG G +A+NL++ M+ G+ P+ V + +L+AC+HSG+V +G F M+ +F I
Sbjct: 431 GYGLHGQGWEAINLYHVMKQA-GVFPNDVTFIGLLTACNHSGLVKEGWELFHCMK-DFEI 488
Query: 467 EPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAK 526
P EHY C+VDLLGRAG A I ++P+E VW LLSAC + V LGEYAA
Sbjct: 489 VPRNEHYSCVVDLLGRAGYLGEACAFIMKIPIEPGVSVWGALLSACKIYRCVTLGEYAAN 548
Query: 527 NLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFV 586
L +L+P +TG+Y+ ++NL+ S+ +W A R LM ++ L K+ G+S +EI+G +Q F
Sbjct: 549 KLFSLDPYNTGHYVQLSNLYASSCLWDCVAHVRVLMREKGLNKDLGYSVIEINGKLQAFH 608
Query: 587 AGDRSHHLSVDIRKTLKELHIKLLEAGYIAEADIV 621
GD+SH ++ +I L+ L +L E G++ + V
Sbjct: 609 VGDKSHPMAKEIFDELQRLERRLKEVGFVPYTESV 643
Score = 229 bits (583), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 138/433 (31%), Positives = 230/433 (53%), Gaps = 11/433 (2%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+IR+ + N + +T+ Y M TGVH + FTFP VLKAC + +H ++K G
Sbjct: 125 IIRSYSRNNMYRDTVEMYRWMRWTGVHPDGFTFPYVLKACTELLDFGLSCIIHGQIIKYG 184
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F D FVQ GL+ +Y+KC ++ V D + R++VSW SIIS +++ EA+ +
Sbjct: 185 FGSDVFVQNGLVALYAKCGHIGVAKVVFDGL--YHRTIVSWTSIISGYAQNGKAVEALRM 242
Query: 121 LKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
+M G++ VS++ + QG S+H V K+G L +E L S+ + YA
Sbjct: 243 FSQMRNNGVKPDWIALVSILRAYTDVDDLEQGRSIHGFVIKMG-LEDEPALLISLTAFYA 301
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K G V A+S FD++ T+++ W +I GY G+ EA L + M ++ PD V +
Sbjct: 302 KCGLVTVAKSFFDQMKTTNVIMWNAMISGYAKNGHAEEAVNLFHYMISRNIKPDSVTVRS 361
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
+L AQVG+L LA M + KS Y ++ ++ L+ MY KCG +E ARRVFD +K
Sbjct: 362 AVLASAQVGSLELAQWMDDYVSKSNYGSDIFVNTSLIDMYAKCGSVEFARRVFDRNSDKD 421
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEE 356
V +W++MI GY G EA+NL+ + + V PN+ T L+AC G + +G E+
Sbjct: 422 VVMWSAMIMGYGLHGQGWEAINLYHVMKQAGVFPNDVTFIGLLTACNHSGLVKEGWELFH 481
Query: 357 YIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVP-DKDLAVWSAMINGYAIH---G 412
+ + + + ++ + + G + +A ++P + ++VW A+++ I+
Sbjct: 482 CMKDFEIVPRNEHYSCVVDLLGRAGYLGEACAFIMKIPIEPGVSVWGALLSACKIYRCVT 541
Query: 413 MGDQALNLFYKMQ 425
+G+ A N + +
Sbjct: 542 LGEYAANKLFSLD 554
>gi|15220337|ref|NP_172596.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122213654|sp|Q3E6Q1.1|PPR32_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g11290
gi|332190592|gb|AEE28713.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 809
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 214/624 (34%), Positives = 347/624 (55%), Gaps = 6/624 (0%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
M++ ++ L + M V + F +LK C + + GK +H ++K G
Sbjct: 106 MLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSG 165
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F D F TGL +MY+KC +RKV D MP R +VSWN+I++ +S+ + A+ +
Sbjct: 166 FSLDLFAMTGLENMYAKCRQVNEARKVFDRMPER--DLVSWNTIVAGYSQNGMARMALEM 223
Query: 121 LKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGL---LNNEIPLANSVMSMYAK 177
+K M L+ S T VSV+ S + IS+ ++ + ++ + ++ +++ MYAK
Sbjct: 224 VKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAK 283
Query: 178 FGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNL 237
G + AR +FD + E ++VSW ++I YV N EA + +M V P V +
Sbjct: 284 CGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGA 343
Query: 238 ILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSV 297
+ CA +G+L +H L ++ G + + N L+SMY KC +++ A +F + +++
Sbjct: 344 LHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTL 403
Query: 298 FLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEY 357
W +MI G+AQ G P +A+N F ++ +V+P+ T + ++A AEL K I
Sbjct: 404 VSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGV 463
Query: 358 IVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQA 417
++ + L+ N V T+L+ M++KCG I A+ +F+ + ++ + W+AMI+GY HG G A
Sbjct: 464 VMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAA 523
Query: 418 LNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLV 477
L LF +MQ +KP+ V + S++SACSHSG+V+ GL F M+ N+ IE S++HY +V
Sbjct: 524 LELFEEMQK-GTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMV 582
Query: 478 DLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTG 537
DLLGRAGR + A I +MPV+ V+ +L AC H NV E AA+ L LNP G
Sbjct: 583 DLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFELNPDDGG 642
Query: 538 NYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVD 597
++L+AN++ +A MW++ R M + L K PG S VEI V F +G +H S
Sbjct: 643 YHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMVEIKNEVHSFFSGSTAHPDSKK 702
Query: 598 IRKTLKELHIKLLEAGYIAEADIV 621
I L++L + EAGY+ + ++V
Sbjct: 703 IYAFLEKLICHIKEAGYVPDTNLV 726
Score = 210 bits (535), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 136/501 (27%), Positives = 247/501 (49%), Gaps = 25/501 (4%)
Query: 26 VHGNSFTFP--LVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVS 83
+ N + P L+L+ C+++ + +++ V K G Q+ F QT L+ ++ +
Sbjct: 31 IPANVYEHPAALLLERCSSLKEL---RQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDE 87
Query: 84 SRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGC 143
+ +V + P+ + V +++++ ++ D+A+ M +E F ++ C
Sbjct: 88 AARVFE--PIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVC 145
Query: 144 ----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSW 199
R G +H + K G + ++ + +MYAK +VNEAR +FD + E +VSW
Sbjct: 146 GDEAELRVGKEIHGLLVKSGF-SLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSW 204
Query: 200 TTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLK 259
TI+ GY G A + M ++ P + ++++ + + + + +H ++
Sbjct: 205 NTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMR 264
Query: 260 SGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNL 319
SG+++ + LV MY KCG LE AR++FD +LE++V W SMI Y Q P EA+ +
Sbjct: 265 SGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLI 324
Query: 320 FKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSK 379
F+++L V+P + ++ L ACA+LG L +G+ I + V GL+ N V SLI M+ K
Sbjct: 325 FQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCK 384
Query: 380 CGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTS 439
C ++ A +F ++ + L W+AMI G+A +G ALN F +M+ +KPD Y S
Sbjct: 385 CKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRS-RTVKPDTFTYVS 443
Query: 440 ILSA-----CSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIH 494
+++A +H G+ + N + + LVD+ + G +A + I
Sbjct: 444 VITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTA------LVDMYAKCGAIMIA-RLIF 496
Query: 495 EMPVEVQAQVWAPLLSACMKH 515
+M E W ++ H
Sbjct: 497 DMMSERHVTTWNAMIDGYGTH 517
>gi|326488767|dbj|BAJ97995.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 919
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 208/619 (33%), Positives = 340/619 (54%), Gaps = 8/619 (1%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+I G+ E L + M +G + T +L ACA+I + GK++HS++LK G
Sbjct: 215 LISRHAQCGNGESALEIFEEMRLSGWTPDCVTIASLLAACASIGDLNKGKQLHSYLLKAG 274
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
D ++ L+D+Y KC V + ++ +VV WN ++ A+ + ++ +
Sbjct: 275 MSPDYIIEGSLLDLYVKCGVIVEALEIFKSGD--RTNVVLWNLMLVAYGQISDLAKSFDL 332
Query: 121 LKEMWVLGLELSASTFVSVVSGCSFRQGISM----HCCVYKLGLLNNEIPLANSVMSMYA 176
+M G+ + T+ ++ C++ I++ H K G +++ ++ ++ MY+
Sbjct: 333 FCQMVAAGVRPNEFTYPCLLRTCTYAGEINLGEQIHLLSIKTGF-ESDMYVSGVLIDMYS 391
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K+G +++AR I + + +VSWT++I GYV EA M+ + PD + +
Sbjct: 392 KYGWLDKARRILEVLEAKDVVSWTSMIAGYVQHEFCKEALETFKDMQLFGIWPDNIGLAS 451
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
I CA + + +HS + SGY+ + + N LV++Y +CG + A +F+A+ K
Sbjct: 452 AISACAGIKAMRQGQQIHSRVYVSGYSADVSIWNALVNLYARCGRSKEAFSLFEAIEHKD 511
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEE 356
W M+ G+AQ G EA+ +F ++ + V+ N T +++SA A L + +GK+I
Sbjct: 512 KITWNGMVSGFAQSGLYEEALEVFIKMYQAGVKYNVFTFVSSISASANLADIKQGKQIHA 571
Query: 357 YIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQ 416
++ G S +V +LI ++ KCG I AK F + +++ W+ +I + HG G +
Sbjct: 572 TVIKTGCTSETEVANALISLYGKCGSIEDAKMQFFEMSERNHVSWNTIITSCSQHGWGLE 631
Query: 417 ALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCL 476
AL+LF +M+ EGLKP+ V + +L+ACSH G+V++GL +FKSM S GI P +HY C+
Sbjct: 632 ALDLFDQMKQ-EGLKPNDVTFIGVLAACSHVGLVEEGLGYFKSMSSEHGIHPRPDHYACV 690
Query: 477 VDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGST 536
VD+LGRAG+ D A K + EMPV A VW LLSAC H N+E+GE AAK LL L P +
Sbjct: 691 VDILGRAGQLDRARKFVEEMPVSANAMVWRTLLSACRVHKNIEIGELAAKYLLELEPHDS 750
Query: 537 GNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSV 596
+Y+L++N + G W R +M DR + KEPG S +E+ V F GDR H L+
Sbjct: 751 ASYVLLSNAYAVTGKWACRDHVRKMMKDRGVRKEPGRSWIEVKNVVHAFFVGDRLHPLAH 810
Query: 597 DIRKTLKELHIKLLEAGYI 615
I K L +L +L + GYI
Sbjct: 811 QIYKYLADLDDRLAKIGYI 829
Score = 228 bits (580), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 142/519 (27%), Positives = 259/519 (49%), Gaps = 10/519 (1%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
M+ NG EE + Y M +GV + VL AC G+ VH+ V K G
Sbjct: 114 MLSGYARNGLGEEAVGLYHQMHCSGVVPTPYVLSSVLSACTKAALFEQGRLVHAQVYKQG 173
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+ V LI +Y + + +V EMP R V++N++IS H++ + A+ +
Sbjct: 174 SCSETVVGNALIALYLRFGSLSLAERVFSEMPYCDR--VTFNTLISRHAQCGNGESALEI 231
Query: 121 LKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
+EM + G T S+++ C+ +G +H + K G+ + I + S++ +Y
Sbjct: 232 FEEMRLSGWTPDCVTIASLLAACASIGDLNKGKQLHSYLLKAGMSPDYI-IEGSLLDLYV 290
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K G + EA IF T++V W ++ Y + ++ ++F L QM V P+ +
Sbjct: 291 KCGVIVEALEIFKSGDRTNVVLWNLMLVAYGQISDLAKSFDLFCQMVAAGVRPNEFTYPC 350
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
L+ C G + L +H L +K+G+ ++ + +L+ MY+K G L+ ARR+ + + K
Sbjct: 351 LLRTCTYAGEINLGEQIHLLSIKTGFESDMYVSGVLIDMYSKYGWLDKARRILEVLEAKD 410
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEE 356
V WTSMI GY Q + EA+ FK + + P+ LA+ +SACA + ++ +G++I
Sbjct: 411 VVSWTSMIAGYVQHEFCKEALETFKDMQLFGIWPDNIGLASAISACAGIKAMRQGQQIHS 470
Query: 357 YIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQ 416
+ ++G ++ + +L++++++CGR +A +FE + KD W+ M++G+A G+ ++
Sbjct: 471 RVYVSGYSADVSIWNALVNLYARCGRSKEAFSLFEAIEHKDKITWNGMVSGFAQSGLYEE 530
Query: 417 ALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCL 476
AL +F KM G+K + + S +SA ++ + G ++ G E L
Sbjct: 531 ALEVFIKMYQA-GVKYNVFTFVSSISASANLADIKQGKQIHATVIKT-GCTSETEVANAL 588
Query: 477 VDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKH 515
+ L G+ G + A EM E W ++++C +H
Sbjct: 589 ISLYGKCGSIEDAKMQFFEMS-ERNHVSWNTIITSCSQH 626
Score = 216 bits (551), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 139/479 (29%), Positives = 241/479 (50%), Gaps = 10/479 (2%)
Query: 12 EETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWD-GKRVHSHVLKVGFQQDAFVQTG 70
E+ LS +++ ++ S F L+ C W +H+ + G +D
Sbjct: 23 EKLLSLFAAKVRQCRGLGSVDFACALRECRGSVKHWPLVPVIHAKAITCGLGEDRIAGNL 82
Query: 71 LIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLE 130
LID+Y+K +R+V +++ R VSW +++S ++R L +EA+ + +M G+
Sbjct: 83 LIDLYAKKGLVQRARRVFEQLSAR--DNVSWVAMLSGYARNGLGEEAVGLYHQMHCSGVV 140
Query: 131 LSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARS 186
+ SV+S C+ F QG +H VYK G + E + N+++++Y +FG ++ A
Sbjct: 141 PTPYVLSSVLSACTKAALFEQGRLVHAQVYKQGSCS-ETVVGNALIALYLRFGSLSLAER 199
Query: 187 IFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGN 246
+F E+ V++ T+I + GN A + +MR TPD V +L+ CA +G+
Sbjct: 200 VFSEMPYCDRVTFNTLISRHAQCGNGESALEIFEEMRLSGWTPDCVTIASLLAACASIGD 259
Query: 247 LFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGG 306
L +HS LLK+G + + ++ L+ +Y KCG + A +F + +V LW M+
Sbjct: 260 LNKGKQLHSYLLKAGMSPDYIIEGSLLDLYVKCGVIVEALEIFKSGDRTNVVLWNLMLVA 319
Query: 307 YAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESN 366
Y Q+ +++ +LF +++ VRPNE T L C G ++ G++I + G ES+
Sbjct: 320 YGQISDLAKSFDLFCQMVAAGVRPNEFTYPCLLRTCTYAGEINLGEQIHLLSIKTGFESD 379
Query: 367 RQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQH 426
V LI M+SK G ++KA+ + E + KD+ W++MI GY H +AL F MQ
Sbjct: 380 MYVSGVLIDMYSKYGWLDKARRILEVLEAKDVVSWTSMIAGYVQHEFCKEALETFKDMQ- 438
Query: 427 VEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGR 485
+ G+ PD + S +SAC+ + G + + G + + LV+L R GR
Sbjct: 439 LFGIWPDNIGLASAISACAGIKAMRQGQQIHSRVYVS-GYSADVSIWNALVNLYARCGR 496
>gi|225444173|ref|XP_002268853.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21300-like [Vitis vinifera]
Length = 853
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 212/621 (34%), Positives = 345/621 (55%), Gaps = 8/621 (1%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
M+ NG ++ + M +T + NS TF VL CA+ I G ++H V+ G
Sbjct: 219 MLNGYVKNGDWDNATGVFMEMRRTETNPNSVTFACVLSVCASEIMINFGSQLHGLVVSSG 278
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+ D+ V L+ MY+KC +R++ D MP +V+WN +IS + + DEA +
Sbjct: 279 LEMDSPVANTLLAMYAKCGHLFDARRLFDMMPKT--DLVTWNGMISGYVQNGFMDEASCL 336
Query: 121 LKEMWVLGLELSASTFVSVV----SGCSFRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
EM ++ + TF S + G + RQG +HC + + G+ + ++ L ++++ +Y
Sbjct: 337 FHEMISARMKPDSITFSSFLPLLSEGATLRQGKEIHCYIIRNGV-SLDVFLKSALIDIYF 395
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K V AR IFD+ IV T +I GYV G N A + + + + + V +
Sbjct: 396 KCRDVEMARKIFDQRTPVDIVVCTAMISGYVLNGMNNNALEIFRWLLQERMRANSVTLAS 455
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
++ CA + L L +H +LK+G+ + + ++ MY KCG L+LA + F + +K
Sbjct: 456 VLPACAGLAALTLGKELHGHILKNGHGGSCYVGSAIMDMYAKCGRLDLAHQTFIGISDKD 515
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEE 356
W SMI +Q G P EA++LF+++ + + +++ LSACA L +L GKEI
Sbjct: 516 AVCWNSMITSCSQNGKPEEAIDLFRQMGMAGTKYDCVSISAALSACANLPALHYGKEIHA 575
Query: 357 YIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQ 416
+++ S+ +++LI M+SKCG ++ A VF+ + +K+ W+++I Y HG
Sbjct: 576 FMMRGAFRSDLFAESALIDMYSKCGNLDLACRVFDTMEEKNEVSWNSIIAAYGNHGRLKD 635
Query: 417 ALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCL 476
+LNLF+ M +G++PD V + +I+SAC H+G VD+G+ +F+ M GI +EHY C+
Sbjct: 636 SLNLFHGMLG-DGIQPDHVTFLAIISACGHAGQVDEGIHYFRCMTEELGIMARMEHYACM 694
Query: 477 VDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGST 536
VDL GRAGR + A I+ MP A VW LL AC H NVEL E A++NL L+P ++
Sbjct: 695 VDLFGRAGRLNEAFGMINSMPFSPDAGVWGTLLGACRLHGNVELAEVASRNLFDLDPQNS 754
Query: 537 GNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSV 596
G Y+L++N+ +AG W+ R LM +R + K PG S ++++ + +FVA DRSH S
Sbjct: 755 GYYVLLSNVHANAGQWESVLKIRSLMKERGVQKVPGCSWIDVNNTTHMFVAADRSHPQSS 814
Query: 597 DIRKTLKELHIKLLEAGYIAE 617
I LK L ++L + GY+ +
Sbjct: 815 QIYLLLKNLFLELRKEGYVPQ 835
Score = 258 bits (659), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 164/524 (31%), Positives = 277/524 (52%), Gaps = 20/524 (3%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MIR T G F+ L Y ML G + +TFP V+KAC +NS+ G+ VH + +G
Sbjct: 118 MIRGFTMMGQFDFALLFYFKMLGCGTLPDKYTFPYVIKACGGLNSVALGRVVHDKIQFMG 177
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F+ D FV + LI YS+ +R + D MP + V WN +++ + + D A V
Sbjct: 178 FELDVFVGSSLIKFYSENGCIHDARYLFDRMPS--KDGVLWNVMLNGYVKNGDWDNATGV 235
Query: 121 LKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
EM ++ TF V+S C+ G +H V G L + P+AN++++MYA
Sbjct: 236 FMEMRRTETNPNSVTFACVLSVCASEIMINFGSQLHGLVVSSG-LEMDSPVANTLLAMYA 294
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K G + +AR +FD + +T +V+W +I GYV G ++EA L ++M + PD + F +
Sbjct: 295 KCGHLFDARRLFDMMPKTDLVTWNGMISGYVQNGFMDEASCLFHEMISARMKPDSITFSS 354
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
+ ++ L +H ++++G + + L + L+ +Y KC D+E+AR++FD
Sbjct: 355 FLPLLSEGATLRQGKEIHCYIIRNGVSLDVFLKSALIDIYFKCRDVEMARKIFDQRTPVD 414
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEE 356
+ + T+MI GY G + A+ +F+ LL+ +R N TLA+ L ACA L +L+ GKE+
Sbjct: 415 IVVCTAMISGYVLNGMNNNALEIFRWLLQERMRANSVTLASVLPACAGLAALTLGKELHG 474
Query: 357 YIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQ 416
+I+ NG + V ++++ M++KCGR++ A + F + DKD W++MI + +G ++
Sbjct: 475 HILKNGHGGSCYVGSAIMDMYAKCGRLDLAHQTFIGISDKDAVCWNSMITSCSQNGKPEE 534
Query: 417 ALNLFYKMQHVEGLKPDAVVYTSILSACS-----HSGMVDDGLSFFKSMQSNFGIEPSIE 471
A++LF +M + G K D V ++ LSAC+ H G + +S+ E +
Sbjct: 535 AIDLFRQMG-MAGTKYDCVSISAALSACANLPALHYGKEIHAFMMRGAFRSDLFAESA-- 591
Query: 472 HYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKH 515
L+D+ + G DLA + M E W +++A H
Sbjct: 592 ----LIDMYSKCGNLDLACRVFDTME-EKNEVSWNSIIAAYGNH 630
Score = 216 bits (550), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 139/516 (26%), Positives = 258/516 (50%), Gaps = 11/516 (2%)
Query: 10 SFEETLSTYSSMLQTGVHGNSFTFPL---VLKACANINSIWDGKRVHSHVLKVGFQQDAF 66
SF LQ +H + P +L+ C + + + G++ H+ +L G +
Sbjct: 23 SFHTNSVNIGKPLQFSIHNDDSLAPQLVSILQTCTDPSGLSQGRQAHAQMLVNGIGYNGI 82
Query: 67 VQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWV 126
+ T L+ MY C F+ ++ + ++ RL WN +I + D A+L +M
Sbjct: 83 LGTKLLGMYVLCGAFLDAKNIFYQL--RLWCSEPWNWMIRGFTMMGQFDFALLFYFKMLG 140
Query: 127 LGLELSASTFVSVVSGCSFRQGISMHCCVY-KLGLLNNEIPL--ANSVMSMYAKFGKVNE 183
G TF V+ C +++ V+ K+ + E+ + +S++ Y++ G +++
Sbjct: 141 CGTLPDKYTFPYVIKACGGLNSVALGRVVHDKIQFMGFELDVFVGSSLIKFYSENGCIHD 200
Query: 184 ARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQ 243
AR +FD + V W ++ GYV G+ + A G+ +MRR P+ V F ++ CA
Sbjct: 201 ARYLFDRMPSKDGVLWNVMLNGYVKNGDWDNATGVFMEMRRTETNPNSVTFACVLSVCAS 260
Query: 244 VGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSM 303
+ +H L++ SG + P+ N L++MY KCG L ARR+FD + + + W M
Sbjct: 261 EIMINFGSQLHGLVVSSGLEMDSPVANTLLAMYAKCGHLFDARRLFDMMPKTDLVTWNGM 320
Query: 304 IGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGL 363
I GY Q G+ EA LF ++ ++P+ T ++ L +E +L +GKEI YI+ NG+
Sbjct: 321 ISGYVQNGFMDEASCLFHEMISARMKPDSITFSSFLPLLSEGATLRQGKEIHCYIIRNGV 380
Query: 364 ESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYK 423
+ ++++LI ++ KC + A+++F++ D+ V +AMI+GY ++GM + AL +F
Sbjct: 381 SLDVFLKSALIDIYFKCRDVEMARKIFDQRTPVDIVVCTAMISGYVLNGMNNNALEIFRW 440
Query: 424 MQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRA 483
+ E ++ ++V S+L AC+ + G + N G S ++D+ +
Sbjct: 441 LLQ-ERMRANSVTLASVLPACAGLAALTLGKELHGHILKN-GHGGSCYVGSAIMDMYAKC 498
Query: 484 GRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVE 519
GR DLA +T + + A W ++++C ++ E
Sbjct: 499 GRLDLAHQTFIGIS-DKDAVCWNSMITSCSQNGKPE 533
>gi|148906747|gb|ABR16520.1| unknown [Picea sitchensis]
Length = 644
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 209/617 (33%), Positives = 350/617 (56%), Gaps = 37/617 (5%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
++++ G E L M++ G+ +S T+ +L+ C N S+ D K +H+H+++
Sbjct: 35 LVKSLCKQGRLREALHILQDMVENGIWPHSSTYDSLLQGCLNAKSLPDAKLLHAHMIQTQ 94
Query: 61 FQ-QDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAIL 119
F+ QD + L+ +Y K V +R+V DEMPV+ +VVSW ++I+A++R EA+
Sbjct: 95 FECQDISLGNKLVSIYVKLGSLVEARRVFDEMPVK--NVVSWTAMIAAYARHEHGQEALG 152
Query: 120 VLKEMWVLGLELSASTFVSVVSGCSFRQGI-SMHCCVYKLGLLNNEIPLANSVMSMYAKF 178
EM +G++ + TF S++ C+ + + H + K G +N + + N ++ MYAK
Sbjct: 153 FFYEMQDVGIQPNHFTFASILPACTDLEVLGEFHDEIVKGGFESN-VFVGNGLVDMYAKR 211
Query: 179 GKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLI 238
G + AR +FD++ + +VSW +I GYV G + +A L ++ + D++ + ++
Sbjct: 212 GCIEFARELFDKMPQRDVVSWNAMIAGYVQNGLIEDALKLFQEIPKR----DVITWNTMM 267
Query: 239 LGCAQVGN------LFLALSMHSLL----LKSGYNNEDPLD-----------------NL 271
G AQ G+ LF + +L+ + +GY + N
Sbjct: 268 AGYAQCGDVENAVELFEKMPEQNLVSWNTMIAGYVQNGSVKEAFKLFQIMPERNVISWNA 327
Query: 272 LVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPN 331
++S + + G +E A ++F + E +V W +MI GY+Q G A+ LF ++ ++PN
Sbjct: 328 VISGFAQNGQVEEALKLFKTMPECNVVSWNAMIAGYSQNGQAENALKLFGQMQMVDMKPN 387
Query: 332 EATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFE 391
T A L ACA L L +G E E ++ +G +S+ V +L+ M++KCG I A++VF+
Sbjct: 388 TETFAIVLPACAALAVLEQGNEAHEVVIRSGFQSDVLVGNTLVGMYAKCGSIEDARKVFD 447
Query: 392 RVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVD 451
R+ +D A SAMI GYAI+G ++L LF +MQ GLKPD V + +LSAC H+G+VD
Sbjct: 448 RMRQQDSASLSAMIVGYAINGCSKESLELFEQMQFT-GLKPDRVTFVGVLSACCHAGLVD 506
Query: 452 DGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSA 511
+G +F M + I P++EHY C++DLLGRAG FD A I++MP++ A +W LLSA
Sbjct: 507 EGRQYFDIMTRFYHITPAMEHYGCMIDLLGRAGCFDEANDLINKMPIKPDADMWGSLLSA 566
Query: 512 CMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEP 571
C H+N++LGE A++L+ LNP + Y+L++N++ +AG W + + R M DR++ K+
Sbjct: 567 CRTHNNIDLGEKVAQHLIALNPQNPAPYVLLSNIYAAAGRWDDIGSVRNRMKDRKVKKKL 626
Query: 572 GWSQVEIDGSVQVFVAG 588
G S + I V F+ G
Sbjct: 627 GCSWIVIKKQVHAFLVG 643
>gi|356502293|ref|XP_003519954.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Glycine max]
Length = 1047
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 208/623 (33%), Positives = 347/623 (55%), Gaps = 8/623 (1%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+I + G ++ L + M + + T +L AC+++ ++ GK+ HS+ +K G
Sbjct: 343 LISGLSQQGYSDKALELFKKMCLDCLKPDCVTVASLLSACSSVGALLVGKQFHSYAIKAG 402
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
D ++ L+D+Y KCSD ++ + + +VV WN ++ A+ +E+ +
Sbjct: 403 MSSDIILEGALLDLYVKCSDIKTAHEFF--LSTETENVVLWNVMLVAYGLLDNLNESFKI 460
Query: 121 LKEMWVLGLELSASTFVSVVSGCSFRQGISM----HCCVYKLGLLNNEIPLANSVMSMYA 176
+M + G+E + T+ S++ CS + + + H V K G N + +++ ++ MYA
Sbjct: 461 FTQMQMEGIEPNQFTYPSILRTCSSLRAVDLGEQIHTQVLKTGFQFN-VYVSSVLIDMYA 519
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K GK++ A IF + E +VSWT +I GY EA L +M+ + D + F +
Sbjct: 520 KLGKLDHALKIFRRLKEKDVVSWTAMIAGYAQHEKFAEALNLFKEMQDQGIHSDNIGFAS 579
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
I CA + L +H+ SGY+++ + N LVS+Y +CG + A FD + K
Sbjct: 580 AISACAGIQALNQGQQIHAQACVSGYSDDLSVGNALVSLYARCGKVRDAYFAFDKIFSKD 639
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEE 356
W S+I G+AQ G+ EA++LF ++ K N T +SA A + ++ GK+I
Sbjct: 640 NISWNSLISGFAQSGHCEEALSLFSQMSKAGQEINSFTFGPAVSAAANVANVKLGKQIHA 699
Query: 357 YIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQ 416
I+ G +S +V LI +++KCG I+ A+ F +P+K+ W+AM+ GY+ HG G +
Sbjct: 700 MIIKTGHDSETEVSNVLITLYAKCGNIDDAERQFFEMPEKNEISWNAMLTGYSQHGHGFK 759
Query: 417 ALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCL 476
AL+LF M+ + G+ P+ V + +LSACSH G+VD+G+ +F+SM+ G+ P EHY C+
Sbjct: 760 ALSLFEDMKQL-GVLPNHVTFVGVLSACSHVGLVDEGIKYFQSMREVHGLVPKPEHYACV 818
Query: 477 VDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGST 536
VDLLGR+G A + + EMP++ A V LLSAC+ H N+++GE+AA +LL L P +
Sbjct: 819 VDLLGRSGLLSRARRFVEEMPIQPDAMVCRTLLSACIVHKNIDIGEFAASHLLELEPKDS 878
Query: 537 GNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSV 596
Y+L++N++ G W R +M DR + KEPG S +E++ SV F AGD+ H
Sbjct: 879 ATYVLLSNMYAVTGKWGCRDRTRQMMKDRGVKKEPGRSWIEVNNSVHAFFAGDQKHPNVD 938
Query: 597 DIRKTLKELHIKLLEAGYIAEAD 619
I + L++L+ E GYI + +
Sbjct: 939 KIYEYLRDLNELAAENGYIPQTN 961
Score = 219 bits (559), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 142/519 (27%), Positives = 268/519 (51%), Gaps = 10/519 (1%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
M+ + +G EE + + M +GV+ + F VL AC + G+++H VLK G
Sbjct: 242 MLSGLSQSGCEEEAVLLFCQMHTSGVYPTPYIFSSVLSACTKVEFYKVGEQLHGLVLKQG 301
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F + +V L+ +YS+ +F+ + +V + M R VS+NS+IS S+ +D+A+ +
Sbjct: 302 FSLETYVCNALVTLYSRLGNFIPAEQVFNAM--LQRDEVSYNSLISGLSQQGYSDKALEL 359
Query: 121 LKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
K+M + L+ T S++S CS G H K G ++++I L +++ +Y
Sbjct: 360 FKKMCLDCLKPDCVTVASLLSACSSVGALLVGKQFHSYAIKAG-MSSDIILEGALLDLYV 418
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K + A F ++V W ++ Y + N+NE+F + QM+ + P+ + +
Sbjct: 419 KCSDIKTAHEFFLSTETENVVLWNVMLVAYGLLDNLNESFKIFTQMQMEGIEPNQFTYPS 478
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
++ C+ + + L +H+ +LK+G+ + ++L+ MY K G L+ A ++F + EK
Sbjct: 479 ILRTCSSLRAVDLGEQIHTQVLKTGFQFNVYVSSVLIDMYAKLGKLDHALKIFRRLKEKD 538
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEE 356
V WT+MI GYAQ +EA+NLFK + + + A+ +SACA + +L++G++I
Sbjct: 539 VVSWTAMIAGYAQHEKFAEALNLFKEMQDQGIHSDNIGFASAISACAGIQALNQGQQIHA 598
Query: 357 YIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQ 416
++G + V +L+ ++++CG++ A F+++ KD W+++I+G+A G ++
Sbjct: 599 QACVSGYSDDLSVGNALVSLYARCGKVRDAYFAFDKIFSKDNISWNSLISGFAQSGHCEE 658
Query: 417 ALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCL 476
AL+LF +M G + ++ + +SA ++ V G +M G + E L
Sbjct: 659 ALSLFSQMSKA-GQEINSFTFGPAVSAAANVANVKLGKQ-IHAMIIKTGHDSETEVSNVL 716
Query: 477 VDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKH 515
+ L + G D A + EMP E W +L+ +H
Sbjct: 717 ITLYAKCGNIDDAERQFFEMP-EKNEISWNAMLTGYSQH 754
Score = 219 bits (557), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 138/501 (27%), Positives = 250/501 (49%), Gaps = 13/501 (2%)
Query: 21 MLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSD 80
M + GV NS T+ +L C + DG ++H +LK+GF + + L+D+Y D
Sbjct: 59 MEERGVRANSQTYLWLLDGCLSSGWFSDGWKLHGKILKMGFCAEVVLCERLMDLYIAFGD 118
Query: 81 FVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVV 140
+ V DEMPVR S WN ++ + + + + M ++ T+ V+
Sbjct: 119 LDGAVTVFDEMPVRPLSC--WNKVLHRFVAGKMAGRVLGLFRRMLQEKVKPDERTYAGVL 176
Query: 141 SGCSFRQGISMHCCVYKLGL------LNNEIPLANSVMSMYAKFGKVNEARSIFDEIGET 194
GC + H CV K+ N + + N ++ +Y K G +N A+ +FD + +
Sbjct: 177 RGCG-GGDVPFH-CVEKIHARTITHGYENSLFVCNPLIDLYFKNGFLNSAKKVFDGLQKR 234
Query: 195 SIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMH 254
VSW ++ G G EA L QM V P +F +++ C +V + +H
Sbjct: 235 DSVSWVAMLSGLSQSGCEEEAVLLFCQMHTSGVYPTPYIFSSVLSACTKVEFYKVGEQLH 294
Query: 255 SLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPS 314
L+LK G++ E + N LV++Y++ G+ A +VF+A+L++ + S+I G +Q GY
Sbjct: 295 GLVLKQGFSLETYVCNALVTLYSRLGNFIPAEQVFNAMLQRDEVSYNSLISGLSQQGYSD 354
Query: 315 EAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLI 374
+A+ LFK++ ++P+ T+A+ LSAC+ +G+L GK+ Y + G+ S+ ++ +L+
Sbjct: 355 KALELFKKMCLDCLKPDCVTVASLLSACSSVGALLVGKQFHSYAIKAGMSSDIILEGALL 414
Query: 375 HMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDA 434
++ KC I A E F +++ +W+ M+ Y + +++ +F +MQ +EG++P+
Sbjct: 415 DLYVKCSDIKTAHEFFLSTETENVVLWNVMLVAYGLLDNLNESFKIFTQMQ-MEGIEPNQ 473
Query: 435 VVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIH 494
Y SIL CS VD G + G + ++ L+D+ + G+ D ALK
Sbjct: 474 FTYPSILRTCSSLRAVDLGEQIHTQVLKT-GFQFNVYVSSVLIDMYAKLGKLDHALKIFR 532
Query: 495 EMPVEVQAQVWAPLLSACMKH 515
+ E W +++ +H
Sbjct: 533 RLK-EKDVVSWTAMIAGYAQH 552
Score = 216 bits (549), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 135/479 (28%), Positives = 252/479 (52%), Gaps = 12/479 (2%)
Query: 13 ETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDG-KRVHSHVLKVGFQQDAFVQTGL 71
L + MLQ V + T+ VL+ C + + +++H+ + G++ FV L
Sbjct: 152 RVLGLFRRMLQEKVKPDERTYAGVLRGCGGGDVPFHCVEKIHARTITHGYENSLFVCNPL 211
Query: 72 IDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLEL 131
ID+Y K S++KV D + + R VSW +++S S++ +EA+L+ +M G+
Sbjct: 212 IDLYFKNGFLNSAKKVFDGL--QKRDSVSWVAMLSGLSQSGCEEEAVLLFCQMHTSGVYP 269
Query: 132 SASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSI 187
+ F SV+S C+ ++ G +H V K G + E + N+++++Y++ G A +
Sbjct: 270 TPYIFSSVLSACTKVEFYKVGEQLHGLVLKQGF-SLETYVCNALVTLYSRLGNFIPAEQV 328
Query: 188 FDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNL 247
F+ + + VS+ ++I G G ++A L +M + PD V +L+ C+ VG L
Sbjct: 329 FNAMLQRDEVSYNSLISGLSQQGYSDKALELFKKMCLDCLKPDCVTVASLLSACSSVGAL 388
Query: 248 FLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGY 307
+ HS +K+G +++ L+ L+ +Y KC D++ A F + ++V LW M+ Y
Sbjct: 389 LVGKQFHSYAIKAGMSSDIILEGALLDLYVKCSDIKTAHEFFLSTETENVVLWNVMLVAY 448
Query: 308 AQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNR 367
L +E+ +F ++ + PN+ T + L C+ L ++ G++I ++ G + N
Sbjct: 449 GLLDNLNESFKIFTQMQMEGIEPNQFTYPSILRTCSSLRAVDLGEQIHTQVLKTGFQFNV 508
Query: 368 QVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHV 427
V + LI M++K G+++ A ++F R+ +KD+ W+AMI GYA H +ALNLF +MQ
Sbjct: 509 YVSSVLIDMYAKLGKLDHALKIFRRLKEKDVVSWTAMIAGYAQHEKFAEALNLFKEMQD- 567
Query: 428 EGLKPDAVVYTSILSACSHSGMVDDGLSFF-KSMQSNFGIEPSIEHYLCLVDLLGRAGR 485
+G+ D + + S +SAC+ ++ G ++ S + + S+ + LV L R G+
Sbjct: 568 QGIHSDNIGFASAISACAGIQALNQGQQIHAQACVSGYSDDLSVGN--ALVSLYARCGK 624
>gi|413922867|gb|AFW62799.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 882
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 207/626 (33%), Positives = 340/626 (54%), Gaps = 10/626 (1%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI N + + + M+ +G N F F V+ AC + G++VH V++ G
Sbjct: 176 MISAYVKNDQSGDAIGVFREMVWSGERPNEFGFSCVVNACTGSRDLEAGRQVHGAVVRTG 235
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+++D F L+DMYSK D + V ++MP VVSWN+ IS + A+ +
Sbjct: 236 YEKDVFTANALVDMYSKLGDIEMAATVFEKMPAA--DVVSWNAFISGCVTHGHDHRALEL 293
Query: 121 LKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
L +M GL + T SV+ C+ F G +H + K +E +A ++ MYA
Sbjct: 294 LLQMKSSGLVPNVFTLSSVLKACAGAGAFNLGRQIHGFMVKAVADFDEF-VAVGLVDMYA 352
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDL--VVF 234
K G +++AR +FD + ++ W +I G + G E L ++MR+ + D+
Sbjct: 353 KHGFLDDARKVFDFMPRRDLILWNALISGCSHDGRHGEVLSLFHRMRKEGLDLDVNRTTL 412
Query: 235 LNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLE 294
+++ A + +H+L K G ++ + N L+ Y KCG L+ A +VF
Sbjct: 413 ASVLKSTASSEAICHTRQVHALAEKIGLLSDSHVINGLIDSYWKCGQLDYAIKVFKESRS 472
Query: 295 KSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEI 354
+ T+M+ +Q + +A+ LF ++L+ + P+ L++ L+AC L + +GK++
Sbjct: 473 DDIISSTTMMTALSQCDHGEDAIKLFVQMLRKGLEPDSFVLSSLLNACTSLSAYEQGKQV 532
Query: 355 EEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMG 414
+++ S+ +L++ ++KCG I A F +P++ + WSAMI G A HG G
Sbjct: 533 HAHLIKRQFTSDVFAGNALVYAYAKCGSIEDADMAFSGLPERGIVSWSAMIGGLAQHGHG 592
Query: 415 DQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYL 474
+AL+LF++M EG+ P+ + TS+LSAC+H+G+VDD +F+SM+ FGI+ + EHY
Sbjct: 593 KRALDLFHRMLD-EGVAPNHITLTSVLSACNHAGLVDDAKKYFESMKETFGIDRTEEHYA 651
Query: 475 CLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPG 534
C++D+LGRAG+ + A++ ++ MP + A VW LL A H + ELG AA+ L TL P
Sbjct: 652 CMIDILGRAGKLEDAMELVNNMPFQANAAVWGALLGASRVHRDPELGRMAAEKLFTLEPE 711
Query: 535 STGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHL 594
+G ++L+AN + SAGMW E A R LM D + KEP S VEI V F+ GD+SH +
Sbjct: 712 KSGTHVLLANTYASAGMWDEMAKVRKLMKDSNVKKEPAMSWVEIKDKVHTFIVGDKSHPM 771
Query: 595 SVDIRKTLKELHIKLLEAGYIAEADI 620
+ DI L EL + +AGY+ ++
Sbjct: 772 TRDIYGKLAELGDLMNKAGYVPNVEV 797
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 129/449 (28%), Positives = 228/449 (50%), Gaps = 15/449 (3%)
Query: 6 TNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDA 65
+NNG + L + +M GV N F P+VLK ++ G +VH+ + D
Sbjct: 79 SNNGMPRDALLAFRAMRGRGVPCNEFALPVVLKCAPDVRF---GAQVHALAVATRLVHDV 135
Query: 66 FVQTGLIDMYSKCSDFVSSRKVLDEMPVRL---RSVVSWNSIISAHSRACLNDEAILVLK 122
FV L+ +Y +R++ DE V + R+ VSWN++ISA+ + + +AI V +
Sbjct: 136 FVANALVAVYGGFGMVDEARRMFDEY-VGVGGERNAVSWNTMISAYVKNDQSGDAIGVFR 194
Query: 123 EMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKF 178
EM G + F VV+ C+ G +H V + G ++ AN+++ MY+K
Sbjct: 195 EMVWSGERPNEFGFSCVVNACTGSRDLEAGRQVHGAVVRTG-YEKDVFTANALVDMYSKL 253
Query: 179 GKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLI 238
G + A ++F+++ +VSW I G V G+ + A L QM+ + P++ +++
Sbjct: 254 GDIEMAATVFEKMPAADVVSWNAFISGCVTHGHDHRALELLLQMKSSGLVPNVFTLSSVL 313
Query: 239 LGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVF 298
CA G L +H ++K+ + ++ + LV MY K G L+ AR+VFD + + +
Sbjct: 314 KACAGAGAFNLGRQIHGFMVKAVADFDEFVAVGLVDMYAKHGFLDDARKVFDFMPRRDLI 373
Query: 299 LWTSMIGGYAQLGYPSEAVNLFKRLLKT--SVRPNEATLATTLSACAELGSLSKGKEIEE 356
LW ++I G + G E ++LF R+ K + N TLA+ L + A ++ +++
Sbjct: 374 LWNALISGCSHDGRHGEVLSLFHRMRKEGLDLDVNRTTLASVLKSTASSEAICHTRQVHA 433
Query: 357 YIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQ 416
GL S+ V LI + KCG+++ A +VF+ D+ + M+ + G+
Sbjct: 434 LAEKIGLLSDSHVINGLIDSYWKCGQLDYAIKVFKESRSDDIISSTTMMTALSQCDHGED 493
Query: 417 ALNLFYKMQHVEGLKPDAVVYTSILSACS 445
A+ LF +M +GL+PD+ V +S+L+AC+
Sbjct: 494 AIKLFVQMLR-KGLEPDSFVLSSLLNACT 521
Score = 193 bits (490), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 132/460 (28%), Positives = 238/460 (51%), Gaps = 18/460 (3%)
Query: 45 SIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSI 104
S++ G +HSH+LK G A L+ +YS+C ++R V DE+P VSW+S+
Sbjct: 19 SLFAGAHLHSHLLKSGLL--AGFSNHLLTLYSRCRLPSAARAVFDEIPDPCH--VSWSSL 74
Query: 105 ISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCS--FRQGISMHCCVYKLGLLN 162
++A+S + +A+L + M G+ + + VV C+ R G +H L++
Sbjct: 75 VTAYSNNGMPRDALLAFRAMRGRGVPCNEFA-LPVVLKCAPDVRFGAQVHALAVATRLVH 133
Query: 163 NEIPLANSVMSMYAKFGKVNEARSIFDEI----GETSIVSWTTIIGGYVNVGNVNEAFGL 218
++ +AN+++++Y FG V+EAR +FDE GE + VSW T+I YV +A G+
Sbjct: 134 -DVFVANALVAVYGGFGMVDEARRMFDEYVGVGGERNAVSWNTMISAYVKNDQSGDAIGV 192
Query: 219 CNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTK 278
+M P+ F ++ C +L +H ++++GY + N LV MY+K
Sbjct: 193 FREMVWSGERPNEFGFSCVVNACTGSRDLEAGRQVHGAVVRTGYEKDVFTANALVDMYSK 252
Query: 279 CGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATT 338
GD+E+A VF+ + V W + I G G+ A+ L ++ + + PN TL++
Sbjct: 253 LGDIEMAATVFEKMPAADVVSWNAFISGCVTHGHDHRALELLLQMKSSGLVPNVFTLSSV 312
Query: 339 LSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDL 398
L ACA G+ + G++I ++V + + V L+ M++K G ++ A++VF+ +P +DL
Sbjct: 313 LKACAGAGAFNLGRQIHGFMVKAVADFDEFVAVGLVDMYAKHGFLDDARKVFDFMPRRDL 372
Query: 399 AVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFK 458
+W+A+I+G + G + L+LF++M+ EGL D V + L++ S + + +
Sbjct: 373 ILWNALISGCSHDGRHGEVLSLFHRMRK-EGLDLD--VNRTTLASVLKSTASSEAICHTR 429
Query: 459 SMQS---NFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHE 495
+ + G+ L+D + G+ D A+K E
Sbjct: 430 QVHALAEKIGLLSDSHVINGLIDSYWKCGQLDYAIKVFKE 469
>gi|297804224|ref|XP_002869996.1| putative protein [Arabidopsis lyrata subsp. lyrata]
gi|297315832|gb|EFH46255.1| putative protein [Arabidopsis lyrata subsp. lyrata]
Length = 1251
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 211/627 (33%), Positives = 340/627 (54%), Gaps = 11/627 (1%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+R + N E+L + M + G N+FTFP V KACA + I + VH+H++K
Sbjct: 619 QVREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARLAYIGYCEMVHTHLIKSP 678
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F D FV T +DM+ KC + KV + MPVR +WN+++S ++ D+ +
Sbjct: 679 FWSDVFVGTATVDMFVKCDSLDYAAKVFERMPVR--DATTWNAMLSGFCQSGHTDKVFSL 736
Query: 121 LKEMWVLGLELSASTFVSVVSGCSFRQGIS----MHCCVYKLGLLNNEIPLANSVMSMYA 176
+EM + + + T ++++ SF + + MH +LG+ + + ++N+ +S Y
Sbjct: 737 FREMRLDEIPPDSVTVMTLIQSASFEKSLKLLKVMHAFGIRLGV-DLQATVSNTWISAYG 795
Query: 177 KFGKVNEARSIFDEI--GETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVF 234
K G ++ A+ +F+ I G+ ++VSW ++ + G +AFG M R PDL F
Sbjct: 796 KCGDLDSAKLVFEAIDRGDRTVVSWNSVFKAFAVFGEAFDAFGHYRLMLRDEFKPDLSTF 855
Query: 235 LNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLE 294
+NL C L +HS + G + + N +SMY+K GD AR +FD +
Sbjct: 856 INLAASCQNPQTLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSGDSCSARLLFDIMPS 915
Query: 295 KSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEI 354
++ WT MI GYA+ G EA+ LF + KT V P+ TL + +S C + GSL GK I
Sbjct: 916 RTCVSWTVMISGYAEKGDMDEALALFHAMAKTGVNPDLVTLLSLISGCGKFGSLEIGKWI 975
Query: 355 EEYIVLNGLE-SNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGM 413
+ + G + N V +LI M+SKCG I++A+++F+ +K + W+ MI GYA++G+
Sbjct: 976 DGRADMYGCKKDNVMVCNALIDMYSKCGSIDEARDIFDNTSEKTMVTWTTMIAGYALNGI 1035
Query: 414 GDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHY 473
+A+ LF KM ++ KP+ + + ++L AC+HSG ++ G +F M+ + I P ++HY
Sbjct: 1036 FLEAMELFSKMIDLD-YKPNHITFLAVLQACAHSGSLEKGWEYFHIMKQVYNISPGLDHY 1094
Query: 474 LCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNP 533
C+VDLLGR G+ D AL+ IH M + A +W LLSAC H NV++ E AA +L L P
Sbjct: 1095 SCMVDLLGRKGKLDEALELIHNMSAKPDAGIWGALLSACKIHRNVKIAEQAADSLFNLEP 1154
Query: 534 GSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHH 593
Y+ M+N++ +AGMW A R +M + K PG S ++++G F G+R H
Sbjct: 1155 QMAAPYVEMSNIYAAAGMWDGFARIRSMMKLWNIKKYPGESVIQVNGKNHTFTVGERGHM 1214
Query: 594 LSVDIRKTLKELHIKLLEAGYIAEADI 620
+ I TL L + + I D+
Sbjct: 1215 ENEAIYSTLNGLSLFARDEKQILHKDV 1241
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/297 (22%), Positives = 141/297 (47%), Gaps = 8/297 (2%)
Query: 192 GETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLAL 251
G +S+ +W + VN + E+ L +M+R P+ F + CA++ +
Sbjct: 609 GLSSVNAWNFQVREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARLAYIGYCE 668
Query: 252 SMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLG 311
+H+ L+KS + ++ + V M+ KC L+ A +VF+ + + W +M+ G+ Q G
Sbjct: 669 MVHTHLIKSPFWSDVFVGTATVDMFVKCDSLDYAAKVFERMPVRDATTWNAMLSGFCQSG 728
Query: 312 YPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQT 371
+ + +LF+ + + P+ T+ T + + + SL K + + + G++ V
Sbjct: 729 HTDKVFSLFREMRLDEIPPDSVTVMTLIQSASFEKSLKLLKVMHAFGIRLGVDLQATVSN 788
Query: 372 SLIHMFSKCGRINKAKEVFERVP--DKDLAVWSAMINGYAIHGMGDQALNLF--YKMQHV 427
+ I + KCG ++ AK VFE + D+ + W+++ +A+ G +A + F Y++
Sbjct: 789 TWISAYGKCGDLDSAKLVFEAIDRGDRTVVSWNSVFKAFAVFG---EAFDAFGHYRLMLR 845
Query: 428 EGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAG 484
+ KPD + ++ ++C + + G S + G + IE + + ++G
Sbjct: 846 DEFKPDLSTFINLAASCQNPQTLTQG-RLIHSHAIHLGTDQDIEAINTFISMYSKSG 901
>gi|224077074|ref|XP_002305120.1| predicted protein [Populus trichocarpa]
gi|222848084|gb|EEE85631.1| predicted protein [Populus trichocarpa]
Length = 786
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 205/612 (33%), Positives = 341/612 (55%), Gaps = 8/612 (1%)
Query: 13 ETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLI 72
E +S + M+ +G+ N F+ ++ C + G+++H +++K+G+ DAF L+
Sbjct: 94 EAVSLFHDMVLSGIRPNEFSLSSMINVCTGLEDSVQGRKIHGYLIKLGYDSDAFSANALV 153
Query: 73 DMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELS 132
DMY+K + V DE + +VSWN+II+ + A+ +L+EM G+ +
Sbjct: 154 DMYAKVGILEDASSVFDE--IAKPDIVSWNAIIAGCVLHEYHHRALELLREMNKSGMCPN 211
Query: 133 ASTFVSVVSGCS---FRQ-GISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIF 188
T S + C+ R+ G +H + K+ + ++ L ++ MY+K +++AR +F
Sbjct: 212 MFTLSSALKACAGMALRELGRQLHSSLIKMDMGSDSF-LGVGLIDMYSKCNSMDDARLVF 270
Query: 189 DEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLF 248
+ E +++W +I G+ EA L M + + ++ A + +
Sbjct: 271 KLMPERDMIAWNAVISGHSQNEEDEEAASLFPLMHTEGIGFNQTTLSTVLKSIAALQANY 330
Query: 249 LALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYA 308
+ +H+L LKSG+ ++ + N L+ Y KCG +E A RVF+ + L+TS++ YA
Sbjct: 331 MCRQIHALSLKSGFEFDNYVVNSLIDTYGKCGHVEDATRVFEESPIVDLVLFTSLVTAYA 390
Query: 309 QLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQ 368
Q G EA+ L+ + ++P+ ++ L+ACA L + +GK++ +I+ G S+
Sbjct: 391 QDGQGEEALRLYLEMQDRGIKPDSFVCSSLLNACASLSAYEQGKQVHVHILKFGFMSDIF 450
Query: 369 VQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVE 428
SL++M++KCG I A F R+P + + WSAMI G A HG G +AL LF +M V
Sbjct: 451 AGNSLVNMYAKCGSIEDASCAFSRIPVRGIVSWSAMIGGLAQHGYGKEALQLFKQMLKV- 509
Query: 429 GLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDL 488
G+ P+ + S+L AC+H+G+V + +F SM+ FGIEP EHY C++DLLGRAG+ +
Sbjct: 510 GVPPNHITLVSVLCACNHAGLVAEAKHYFNSMKILFGIEPMQEHYACMIDLLGRAGKLEA 569
Query: 489 ALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTS 548
A++ +++MP + A VW LL A H N++LGE AA+ LL L P +G ++L+AN++ S
Sbjct: 570 AMELVNKMPFQANALVWGALLGAARIHKNIDLGEQAAEMLLALEPEKSGTHVLLANIYAS 629
Query: 549 AGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKELHIK 608
GMW + A R LM D ++ KEPG S +E+ V F+ GDRSH S +I L EL
Sbjct: 630 VGMWDKVARVRRLMKDGKVKKEPGMSWLEVKDKVYTFIVGDRSHSRSTEIYAKLDELSDL 689
Query: 609 LLEAGYIAEADI 620
L +AGY+ +I
Sbjct: 690 LKKAGYVPMVEI 701
Score = 246 bits (627), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 165/538 (30%), Positives = 275/538 (51%), Gaps = 15/538 (2%)
Query: 25 GVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSS 84
G+ N F FP VLKAC + GK+VH V+ GF D FV L+ +Y+KC F +
Sbjct: 5 GIKCNEFAFPSVLKACTVTKDLVLGKQVHGIVVVTGFDSDEFVANSLVILYAKCGGFGDA 64
Query: 85 RKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGL---ELSASTFVSVVS 141
R + D +P RSVVSWN++ S + + ++ EA+ + +M + G+ E S S+ ++V +
Sbjct: 65 RSLFDAIPD--RSVVSWNALFSCYVHSDMHGEAVSLFHDMVLSGIRPNEFSLSSMINVCT 122
Query: 142 GCSFR-QGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWT 200
G QG +H + KLG ++ AN+++ MYAK G + +A S+FDEI + IVSW
Sbjct: 123 GLEDSVQGRKIHGYLIKLGYDSDAFS-ANALVDMYAKVGILEDASSVFDEIAKPDIVSWN 181
Query: 201 TIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKS 260
II G V + A L +M + + P++ + + CA + L +HS L+K
Sbjct: 182 AIIAGCVLHEYHHRALELLREMNKSGMCPNMFTLSSALKACAGMALRELGRQLHSSLIKM 241
Query: 261 GYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLF 320
++ L L+ MY+KC ++ AR VF + E+ + W ++I G++Q EA +LF
Sbjct: 242 DMGSDSFLGVGLIDMYSKCNSMDDARLVFKLMPERDMIAWNAVISGHSQNEEDEEAASLF 301
Query: 321 KRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKC 380
+ + N+ TL+T L + A L + ++I + +G E + V SLI + KC
Sbjct: 302 PLMHTEGIGFNQTTLSTVLKSIAALQANYMCRQIHALSLKSGFEFDNYVVNSLIDTYGKC 361
Query: 381 GRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSI 440
G + A VFE P DL ++++++ YA G G++AL L+ +MQ G+KPD+ V +S+
Sbjct: 362 GHVEDATRVFEESPIVDLVLFTSLVTAYAQDGQGEEALRLYLEMQD-RGIKPDSFVCSSL 420
Query: 441 LSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEV 500
L+AC+ + G + FG I LV++ + G + A +PV
Sbjct: 421 LNACASLSAYEQGKQVHVHIL-KFGFMSDIFAGNSLVNMYAKCGSIEDASCAFSRIPVRG 479
Query: 501 QAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTS---AGMWKEA 555
W+ ++ +H + K +L + G N+I + ++ + AG+ EA
Sbjct: 480 IVS-WSAMIGGLAQHGYGKEALQLFKQMLKV--GVPPNHITLVSVLCACNHAGLVAEA 534
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 107/382 (28%), Positives = 197/382 (51%), Gaps = 13/382 (3%)
Query: 124 MWVLGLELSASTFVSVVSGCSFRQ----GISMHCCVYKLGLLNNEIPLANSVMSMYAKFG 179
M +LG++ + F SV+ C+ + G +H V G ++E +ANS++ +YAK G
Sbjct: 1 MHLLGIKCNEFAFPSVLKACTVTKDLVLGKQVHGIVVVTGFDSDEF-VANSLVILYAKCG 59
Query: 180 KVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLIL 239
+ARS+FD I + S+VSW + YV+ EA L + M + P+ ++I
Sbjct: 60 GFGDARSLFDAIPDRSVVSWNALFSCYVHSDMHGEAVSLFHDMVLSGIRPNEFSLSSMIN 119
Query: 240 GCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFL 299
C + + +H L+K GY+++ N LV MY K G LE A VFD + + +
Sbjct: 120 VCTGLEDSVQGRKIHGYLIKLGYDSDAFSANALVDMYAKVGILEDASSVFDEIAKPDIVS 179
Query: 300 WTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIV 359
W ++I G Y A+ L + + K+ + PN TL++ L ACA + G+++ ++
Sbjct: 180 WNAIIAGCVLHEYHHRALELLREMNKSGMCPNMFTLSSALKACAGMALRELGRQLHSSLI 239
Query: 360 LNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALN 419
+ S+ + LI M+SKC ++ A+ VF+ +P++D+ W+A+I+G++ + ++A +
Sbjct: 240 KMDMGSDSFLGVGLIDMYSKCNSMDDARLVFKLMPERDMIAWNAVISGHSQNEEDEEAAS 299
Query: 420 LFYKMQHVEGLKPDAVVYTSIL---SACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCL 476
LF + H EG+ + +++L +A + M + S++S F + + + L
Sbjct: 300 LF-PLMHTEGIGFNQTTLSTVLKSIAALQANYMCRQIHAL--SLKSGFEFDNYVVN--SL 354
Query: 477 VDLLGRAGRFDLALKTIHEMPV 498
+D G+ G + A + E P+
Sbjct: 355 IDTYGKCGHVEDATRVFEESPI 376
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 82/314 (26%), Positives = 156/314 (49%), Gaps = 13/314 (4%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+I + N EE S + M G+ N T VLK+ A + + + +++H+ LK G
Sbjct: 284 VISGHSQNEEDEEAASLFPLMHTEGIGFNQTTLSTVLKSIAALQANYMCRQIHALSLKSG 343
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F+ D +V LID Y KC + +V +E P+ +V + S+++A+++ +EA+ +
Sbjct: 344 FEFDNYVVNSLIDTYGKCGHVEDATRVFEESPI--VDLVLFTSLVTAYAQDGQGEEALRL 401
Query: 121 LKEMWVLGLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
EM G++ + S+++ C ++ QG +H + K G +++ I NS+++MYA
Sbjct: 402 YLEMQDRGIKPDSFVCSSLLNACASLSAYEQGKQVHVHILKFGFMSD-IFAGNSLVNMYA 460
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K G + +A F I IVSW+ +IGG G EA L QM ++ V P+ + ++
Sbjct: 461 KCGSIEDASCAFSRIPVRGIVSWSAMIGGLAQHGYGKEALQLFKQMLKVGVPPNHITLVS 520
Query: 237 LILGCAQVGNLFLALSMH---SLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAV- 292
++ C G +A + H S+ + G ++ + + G LE A + + +
Sbjct: 521 VLCACNHAG--LVAEAKHYFNSMKILFGIEPMQEHYACMIDLLGRAGKLEAAMELVNKMP 578
Query: 293 LEKSVFLWTSMIGG 306
+ + +W +++G
Sbjct: 579 FQANALVWGALLGA 592
>gi|356506884|ref|XP_003522204.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g47840-like [Glycine max]
Length = 752
Score = 380 bits (977), Expect = e-103, Method: Compositional matrix adjust.
Identities = 212/617 (34%), Positives = 332/617 (53%), Gaps = 9/617 (1%)
Query: 1 MIRNSTNNGSFEETLSTYSSM-LQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKV 59
+I N E L +S+M +Q G+ + F + LKAC +I G+ +H +K
Sbjct: 127 LIAGYVNASDSYEALILFSNMWVQPGLQRDQFMISVALKACGLGVNICFGELLHGFSVKS 186
Query: 60 GFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAIL 119
G FV + LIDMY K +V +M R +VVSW +II+ A N EA+L
Sbjct: 187 GLINSVFVSSALIDMYMKVGKIEQGCRVFKKMTKR--NVVSWTAIIAGLVHAGYNMEALL 244
Query: 120 VLKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMY 175
EMW+ + + TF + + G ++H K G + + N++ +MY
Sbjct: 245 YFSEMWISKVGYDSHTFAIALKASADSSLLHHGKAIHTQTIKQGFDESSFVI-NTLATMY 303
Query: 176 AKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFL 235
K GK + +F+++ +VSWTT+I YV G A +MR+ +V+P+ F
Sbjct: 304 NKCGKADYVMRLFEKMKMPDVVSWTTLITTYVQKGEEEHAVEAFKRMRKSNVSPNKYTFA 363
Query: 236 NLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEK 295
+I CA + +H +L+ G + + N +V++Y+K G L+ A VF + K
Sbjct: 364 AVISACANLAIAKWGEQIHGHVLRLGLVDALSVANSIVTLYSKSGLLKSASLVFHGITRK 423
Query: 296 SVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIE 355
+ W+++I Y+Q GY EA + + + +PNE L++ LS C + L +GK++
Sbjct: 424 DIISWSTIIAVYSQGGYAKEAFDYLSWMRREGPKPNEFALSSVLSVCGSMALLEQGKQVH 483
Query: 356 EYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGD 415
+++ G++ V ++LI M+SKCG + +A ++F + ++ W+AMINGYA HG
Sbjct: 484 AHVLCIGIDHEAMVHSALISMYSKCGSVEEASKIFNGMKINNIISWTAMINGYAEHGYSQ 543
Query: 416 QALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLC 475
+A+NLF K+ V GLKPD V + +L+ACSH+GMVD G +F M + + I PS EHY C
Sbjct: 544 EAINLFEKISSV-GLKPDYVTFIGVLTACSHAGMVDLGFYYFMLMTNEYQISPSKEHYGC 602
Query: 476 LVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGS 535
++DLL RAGR A I MP VW+ LL +C H +V+ G + A+ LL L+P S
Sbjct: 603 IIDLLCRAGRLSEAEHMIRSMPCYTDDVVWSTLLRSCRVHGDVDRGRWTAEQLLRLDPNS 662
Query: 536 TGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLS 595
G +I +AN++ + G WKEAA R LM + + KE GWS V ++ + FVAGD++H S
Sbjct: 663 AGTHIALANIYAAKGRWKEAAHIRKLMKSKGVIKERGWSWVNVNDKLNAFVAGDQAHPQS 722
Query: 596 VDIRKTLKELHIKLLEA 612
I L+ L + +A
Sbjct: 723 EHITTVLELLSANIGDA 739
Score = 178 bits (451), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 123/450 (27%), Positives = 218/450 (48%), Gaps = 22/450 (4%)
Query: 63 QDAFVQTGLIDMYSKCSDFVS------SRKVLDEMPVRLRSVVSWNSIISAHSRACLNDE 116
Q+A+ ++++ S+ V SR + D+M R +SW ++I+ + A + E
Sbjct: 82 QNAYSVHNMLELNSELKQLVKQGQLCKSRYMFDKMT--HRDEISWTTLIAGYVNASDSYE 139
Query: 117 AILVLKEMWVL-GLELSASTFVSVVSGCSFRQGIS----MHCCVYKLGLLNNEIPLANSV 171
A+++ MWV GL+ + C I +H K GL+N+ + +++++
Sbjct: 140 ALILFSNMWVQPGLQRDQFMISVALKACGLGVNICFGELLHGFSVKSGLINS-VFVSSAL 198
Query: 172 MSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDL 231
+ MY K GK+ + +F ++ + ++VSWT II G V+ G EA ++M V D
Sbjct: 199 IDMYMKVGKIEQGCRVFKKMTKRNVVSWTAIIAGLVHAGYNMEALLYFSEMWISKVGYDS 258
Query: 232 VVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDA 291
F + A L ++H+ +K G++ + N L +MY KCG + R+F+
Sbjct: 259 HTFAIALKASADSSLLHHGKAIHTQTIKQGFDESSFVINTLATMYNKCGKADYVMRLFEK 318
Query: 292 VLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKG 351
+ V WT++I Y Q G AV FKR+ K++V PN+ T A +SACA L G
Sbjct: 319 MKMPDVVSWTTLITTYVQKGEEEHAVEAFKRMRKSNVSPNKYTFAAVISACANLAIAKWG 378
Query: 352 KEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIH 411
++I +++ GL V S++ ++SK G + A VF + KD+ WS +I Y+
Sbjct: 379 EQIHGHVLRLGLVDALSVANSIVTLYSKSGLLKSASLVFHGITRKDIISWSTIIAVYSQG 438
Query: 412 GMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSN---FGIEP 468
G +A + M+ EG KP+ +S+LS C +++ G K + ++ GI+
Sbjct: 439 GYAKEAFDYLSWMRR-EGPKPNEFALSSVLSVCGSMALLEQG----KQVHAHVLCIGIDH 493
Query: 469 SIEHYLCLVDLLGRAGRFDLALKTIHEMPV 498
+ L+ + + G + A K + M +
Sbjct: 494 EAMVHSALISMYSKCGSVEEASKIFNGMKI 523
>gi|414869547|tpg|DAA48104.1| TPA: hypothetical protein ZEAMMB73_530850 [Zea mays]
Length = 1091
Score = 380 bits (977), Expect = e-103, Method: Compositional matrix adjust.
Identities = 206/610 (33%), Positives = 329/610 (53%), Gaps = 9/610 (1%)
Query: 9 GSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQ 68
G FEE+LS + M + G+ + +LK ++ DG H +++K+GF V
Sbjct: 396 GEFEESLSLFVQMHELGIAPDEHAISCLLKCITCLSCARDGLVAHGYIVKLGFGAQCAVC 455
Query: 69 TGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLG 128
LI Y+K + + V + MP + +SWNS+IS S LN EAI + MW G
Sbjct: 456 NALISFYAKSNMIGDAVLVFNRMP--RQDTISWNSVISGCSSNGLNSEAIELFIRMWTQG 513
Query: 129 LELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEA 184
EL + T +SV+ C+ + G +H K GL+ E LAN+++ MY+
Sbjct: 514 QELDSVTLLSVLPACAQSRYWFAGRVVHGYSVKTGLIG-ETSLANALLDMYSNCSDWQST 572
Query: 185 RSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQV 244
IF +G+ ++VSWT +I Y+ G ++ GL +M + PD+ + + A
Sbjct: 573 NQIFRSMGQKNVVSWTAMITSYMRAGLFDKVAGLLQEMVLDGIRPDVFAVTSALHAFAGD 632
Query: 245 GNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMI 304
+L S+H +++G P+ N L+ MY KC ++E AR +FD V K V W ++I
Sbjct: 633 ESLKQGKSVHGYTIRNGMEKLLPVANALMEMYVKCRNVEEARLIFDRVTNKDVISWNTLI 692
Query: 305 GGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLE 364
GGY++ +P+E+ +LF +L RPN T+ L A A + SL +G+EI Y + G
Sbjct: 693 GGYSRNNFPNESFSLFSDML-LQFRPNAVTMTCILPAAASISSLERGREIHAYALRRGFL 751
Query: 365 SNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKM 424
+ +L+ M+ KCG + A+ +F+R+ K+L W+ MI GY +HG G A+ LF +M
Sbjct: 752 EDSYASNALVDMYVKCGALLVARVLFDRLTKKNLISWTIMIAGYGMHGFGKHAIALFEQM 811
Query: 425 QHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAG 484
+ G++PDA +++IL AC HSG+ +G FFK+MQ + IEP ++HY C+VDLL R G
Sbjct: 812 RG-SGIEPDAASFSAILYACCHSGLAAEGRRFFKAMQKEYKIEPKLKHYTCIVDLLSRTG 870
Query: 485 RFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMAN 544
AL+ I MP+E + +W LL C H NV+L E A + L P +TG Y+L+AN
Sbjct: 871 DLKEALEFIESMPIEPDSSIWVSLLHGCRIHKNVKLAEKVADKVFKLEPENTGYYVLLAN 930
Query: 545 LFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKE 604
++ A W+ + + R L + G+S +E+ V VF+A +R+H I + L +
Sbjct: 931 IYAEAERWEAVKKLKNKIGGRGLRENTGYSWIEVRSKVHVFIADNRNHPDWNRIAEFLDD 990
Query: 605 LHIKLLEAGY 614
+ ++ + G+
Sbjct: 991 VARRMRQEGH 1000
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 127/421 (30%), Positives = 218/421 (51%), Gaps = 18/421 (4%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+I ++NG E + + M G +S T VL ACA + G+ VH + +K G
Sbjct: 489 VISGCSSNGLNSEAIELFIRMWTQGQELDSVTLLSVLPACAQSRYWFAGRVVHGYSVKTG 548
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+ + L+DMYS CSD+ S+ ++ M ++VVSW ++I+++ RA L D+ +
Sbjct: 549 LIGETSLANALLDMYSNCSDWQSTNQIFRSMG--QKNVVSWTAMITSYMRAGLFDKVAGL 606
Query: 121 LKEMWVLGLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
L+EM + G+ S + S +QG S+H + G + +P+AN++M MY
Sbjct: 607 LQEMVLDGIRPDVFAVTSALHAFAGDESLKQGKSVHGYTIRNG-MEKLLPVANALMEMYV 665
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K V EAR IFD + ++SW T+IGGY NE+F L + M + P+ V
Sbjct: 666 KCRNVEEARLIFDRVTNKDVISWNTLIGGYSRNNFPNESFSLFSDM-LLQFRPNAVTMTC 724
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
++ A + +L +H+ L+ G+ + N LV MY KCG L +AR +FD + +K+
Sbjct: 725 ILPAAASISSLERGREIHAYALRRGFLEDSYASNALVDMYVKCGALLVARVLFDRLTKKN 784
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEI-- 354
+ WT MI GY G+ A+ LF+++ + + P+ A+ + L AC G ++G+
Sbjct: 785 LISWTIMIAGYGMHGFGKHAIALFEQMRGSGIEPDAASFSAILYACCHSGLAAEGRRFFK 844
Query: 355 ---EEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVP-DKDLAVWSAMINGYAI 410
+EY + E + T ++ + S+ G + +A E E +P + D ++W ++++G I
Sbjct: 845 AMQKEYKI----EPKLKHYTCIVDLLSRTGDLKEALEFIESMPIEPDSSIWVSLLHGCRI 900
Query: 411 H 411
H
Sbjct: 901 H 901
Score = 198 bits (504), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 133/467 (28%), Positives = 232/467 (49%), Gaps = 18/467 (3%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI +NG + +S M G +S T VL ACA + GK VH + +K G
Sbjct: 276 MIGGCFSNGWHGTAVDLFSKMWSQGTEISSVTVLSVLPACAGLGYGLIGKAVHGYSVKSG 335
Query: 61 FQ----------QDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSR 110
DA + + L+ MY KC D S+R+V D M + +V WN I+ +++
Sbjct: 336 LLWGLDSVQSGIDDAALGSKLVFMYVKCGDMASARRVFDAMSSK-GNVHVWNLIMGGYAK 394
Query: 111 ACLNDEAILVLKEMWVLGL---ELSASTFVSVVSGCSF-RQGISMHCCVYKLGLLNNEIP 166
+E++ + +M LG+ E + S + ++ S R G+ H + KLG +
Sbjct: 395 VGEFEESLSLFVQMHELGIAPDEHAISCLLKCITCLSCARDGLVAHGYIVKLG-FGAQCA 453
Query: 167 LANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMS 226
+ N+++S YAK + +A +F+ + +SW ++I G + G +EA L +M
Sbjct: 454 VCNALISFYAKSNMIGDAVLVFNRMPRQDTISWNSVISGCSSNGLNSEAIELFIRMWTQG 513
Query: 227 VTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELAR 286
D V L+++ CAQ F +H +K+G E L N L+ MY+ C D +
Sbjct: 514 QELDSVTLLSVLPACAQSRYWFAGRVVHGYSVKTGLIGETSLANALLDMYSNCSDWQSTN 573
Query: 287 RVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELG 346
++F ++ +K+V WT+MI Y + G + L + ++ +RP+ + + L A A
Sbjct: 574 QIFRSMGQKNVVSWTAMITSYMRAGLFDKVAGLLQEMVLDGIRPDVFAVTSALHAFAGDE 633
Query: 347 SLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMIN 406
SL +GK + Y + NG+E V +L+ M+ KC + +A+ +F+RV +KD+ W+ +I
Sbjct: 634 SLKQGKSVHGYTIRNGMEKLLPVANALMEMYVKCRNVEEARLIFDRVTNKDVISWNTLIG 693
Query: 407 GYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDG 453
GY+ + +++ +LF M + +P+AV T IL A + ++ G
Sbjct: 694 GYSRNNFPNESFSLFSDM--LLQFRPNAVTMTCILPAAASISSLERG 738
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 140/491 (28%), Positives = 228/491 (46%), Gaps = 32/491 (6%)
Query: 9 GSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQ 68
G F+E +S + M GV ++ VLK +++ S+ +G+ +H + K+G Q V
Sbjct: 183 GDFQEAVSLFRQMQCCGVSPDAHAVSCVLKCVSSLGSLTEGEVIHGLLEKLGLGQACAVA 242
Query: 69 TGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLG 128
LI +YS+C + +V D M R +SWNS+I + A+ + +MW G
Sbjct: 243 NALIAVYSRCGRMEDAARVFDSM--HPRDAISWNSMIGGCFSNGWHGTAVDLFSKMWSQG 300
Query: 129 LELSASTFVSVVSGCSFRQ----GISMHCCVYKLGLL---------NNEIPLANSVMSMY 175
E+S+ T +SV+ C+ G ++H K GLL ++ L + ++ MY
Sbjct: 301 TEISSVTVLSVLPACAGLGYGLIGKAVHGYSVKSGLLWGLDSVQSGIDDAALGSKLVFMY 360
Query: 176 AKFGKVNEARSIFDEIGETSIVS-WTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPD---L 231
K G + AR +FD + V W I+GGY VG E+ L QM + + PD +
Sbjct: 361 VKCGDMASARRVFDAMSSKGNVHVWNLIMGGYAKVGEFEESLSLFVQMHELGIAPDEHAI 420
Query: 232 VVFLNLI--LGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVF 289
L I L CA+ G L H ++K G+ + + N L+S Y K + A VF
Sbjct: 421 SCLLKCITCLSCARDG-----LVAHGYIVKLGFGAQCAVCNALISFYAKSNMIGDAVLVF 475
Query: 290 DAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLS 349
+ + + W S+I G + G SEA+ LF R+ + TL + L ACA+
Sbjct: 476 NRMPRQDTISWNSVISGCSSNGLNSEAIELFIRMWTQGQELDSVTLLSVLPACAQSRYWF 535
Query: 350 KGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYA 409
G+ + Y V GL + +L+ M+S C ++F + K++ W+AMI Y
Sbjct: 536 AGRVVHGYSVKTGLIGETSLANALLDMYSNCSDWQSTNQIFRSMGQKNVVSWTAMITSYM 595
Query: 410 IHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPS 469
G+ D+ L +M ++G++PD TS L H+ D+ L KS+ + I
Sbjct: 596 RAGLFDKVAGLLQEMV-LDGIRPDVFAVTSAL----HAFAGDESLKQGKSVH-GYTIRNG 649
Query: 470 IEHYLCLVDLL 480
+E L + + L
Sbjct: 650 MEKLLPVANAL 660
Score = 185 bits (469), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 126/436 (28%), Positives = 222/436 (50%), Gaps = 23/436 (5%)
Query: 32 TFPLVLKACANINSIWDGKRVHSHVLKVGFQ----QDAFVQTGLIDMYSKCSDFVSSRKV 87
++ +V++ C S+ KR H+ + + + + L+ Y KC D +R V
Sbjct: 99 SYCMVVQLCGEERSLEAAKRAHALIRASSAAATGGKGSVLGKRLVLAYLKCGDLGEARTV 158
Query: 88 LDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGC---- 143
D MP + V W S++SA+++A EA+ + ++M G+ A VS V C
Sbjct: 159 FDGMPPQAADVRVWTSLMSAYAKAGDFQEAVSLFRQMQCCGVSPDAHA-VSCVLKCVSSL 217
Query: 144 -SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTI 202
S +G +H + KLGL +AN+++++Y++ G++ +A +FD + +SW ++
Sbjct: 218 GSLTEGEVIHGLLEKLGL-GQACAVANALIAVYSRCGRMEDAARVFDSMHPRDAISWNSM 276
Query: 203 IGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGY 262
IGG + G A L ++M V L+++ CA +G + ++H +KSG
Sbjct: 277 IGGCFSNGWHGTAVDLFSKMWSQGTEISSVTVLSVLPACAGLGYGLIGKAVHGYSVKSGL 336
Query: 263 ----------NNEDPLDNLLVSMYTKCGDLELARRVFDAVLEK-SVFLWTSMIGGYAQLG 311
++ L + LV MY KCGD+ ARRVFDA+ K +V +W ++GGYA++G
Sbjct: 337 LWGLDSVQSGIDDAALGSKLVFMYVKCGDMASARRVFDAMSSKGNVHVWNLIMGGYAKVG 396
Query: 312 YPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQT 371
E+++LF ++ + + P+E ++ L L G YIV G + V
Sbjct: 397 EFEESLSLFVQMHELGIAPDEHAISCLLKCITCLSCARDGLVAHGYIVKLGFGAQCAVCN 456
Query: 372 SLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLK 431
+LI ++K I A VF R+P +D W+++I+G + +G+ +A+ LF +M +G +
Sbjct: 457 ALISFYAKSNMIGDAVLVFNRMPRQDTISWNSVISGCSSNGLNSEAIELFIRMW-TQGQE 515
Query: 432 PDAVVYTSILSACSHS 447
D+V S+L AC+ S
Sbjct: 516 LDSVTLLSVLPACAQS 531
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 104/365 (28%), Positives = 183/365 (50%), Gaps = 28/365 (7%)
Query: 167 LANSVMSMYAKFGKVNEARSIFDEIGETS--IVSWTTIIGGYVNVGNVNEAFGLCNQMRR 224
L ++ Y K G + EAR++FD + + + WT+++ Y G+ EA L QM+
Sbjct: 138 LGKRLVLAYLKCGDLGEARTVFDGMPPQAADVRVWTSLMSAYAKAGDFQEAVSLFRQMQC 197
Query: 225 MSVTPDLVVFLNLILGC-AQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLE 283
V+PD ++ +L C + +G+L +H LL K G + N L+++Y++CG +E
Sbjct: 198 CGVSPDAHA-VSCVLKCVSSLGSLTEGEVIHGLLEKLGLGQACAVANALIAVYSRCGRME 256
Query: 284 LARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACA 343
A RVFD++ + W SMIGG G+ AV+LF ++ + T+ + L ACA
Sbjct: 257 DAARVFDSMHPRDAISWNSMIGGCFSNGWHGTAVDLFSKMWSQGTEISSVTVLSVLPACA 316
Query: 344 ELGSLSKGKEIEEYIV----LNGLES------NRQVQTSLIHMFSKCGRINKAKEVFERV 393
LG GK + Y V L GL+S + + + L+ M+ KCG + A+ VF+ +
Sbjct: 317 GLGYGLIGKAVHGYSVKSGLLWGLDSVQSGIDDAALGSKLVFMYVKCGDMASARRVFDAM 376
Query: 394 PDK-DLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILS-----ACSHS 447
K ++ VW+ ++ GYA G +++L+LF +M H G+ PD + +L +C+
Sbjct: 377 SSKGNVHVWNLIMGGYAKVGEFEESLSLFVQM-HELGIAPDEHAISCLLKCITCLSCARD 435
Query: 448 GMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAP 507
G+V G ++ FG + ++ + L+ ++ A+ + MP + W
Sbjct: 436 GLVAHGY----IVKLGFGAQCAVCN--ALISFYAKSNMIGDAVLVFNRMPRQ-DTISWNS 488
Query: 508 LLSAC 512
++S C
Sbjct: 489 VISGC 493
>gi|356528519|ref|XP_003532850.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g39530-like [Glycine max]
Length = 849
Score = 380 bits (977), Expect = e-102, Method: Compositional matrix adjust.
Identities = 208/614 (33%), Positives = 351/614 (57%), Gaps = 9/614 (1%)
Query: 9 GSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQ 68
G E +L ++ M + V+ + + VL AC+ + + GK++H +VL+ GF D V
Sbjct: 234 GRSEVSLKLFNQMREGDVYPDRYVISSVLSACSMLEFLEGGKQIHGYVLRRGFDMDVSVV 293
Query: 69 TGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLG 128
G+ID Y KC + RK+ + + + VVSW ++I+ + + +A+ + EM G
Sbjct: 294 NGIIDFYLKCHKVKTGRKLFNRLVDK--DVVSWTTMIAGCMQNSFHGDAMDLFVEMVRKG 351
Query: 129 LELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEA 184
+ A SV++ C + ++G +H K+ + N++ + N ++ MYAK + A
Sbjct: 352 WKPDAFGCTSVLNSCGSLQALQKGRQVHAYAIKVNIDNDDF-VKNGLIDMYAKCDSLTNA 410
Query: 185 RSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQV 244
R +FD + ++VS+ +I GY + EA L +MR P L+ F++L+ + +
Sbjct: 411 RKVFDLVAAINVVSYNAMIEGYSRQDKLVEALDLFREMRLSLSPPTLLTFVSLLGLSSSL 470
Query: 245 GNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMI 304
L L+ +H L++K G + + + L+ +Y+KC + AR VF+ + ++ + +W +M
Sbjct: 471 FLLELSSQIHCLIIKFGVSLDSFAGSALIDVYSKCSCVGDARLVFEEIYDRDIVVWNAMF 530
Query: 305 GGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLE 364
GY+Q E++ L+K L + ++PNE T A ++A + + SL G++ ++ GL+
Sbjct: 531 SGYSQQLENEESLKLYKDLQMSRLKPNEFTFAAVIAAASNIASLRHGQQFHNQVIKMGLD 590
Query: 365 SNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKM 424
+ V SL+ M++KCG I ++ + F +D+A W++MI+ YA HG +AL +F +M
Sbjct: 591 DDPFVTNSLVDMYAKCGSIEESHKAFSSTNQRDIACWNSMISTYAQHGDAAKALEVFERM 650
Query: 425 QHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAG 484
+EG+KP+ V + +LSACSH+G++D G F+SM S FGIEP I+HY C+V LLGRAG
Sbjct: 651 I-MEGVKPNYVTFVGLLSACSHAGLLDLGFHHFESM-SKFGIEPGIDHYACMVSLLGRAG 708
Query: 485 RFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMAN 544
+ A + + +MP++ A VW LLSAC +VELG YAA+ ++ +P +G+YIL++N
Sbjct: 709 KIYEAKEFVKKMPIKPAAVVWRSLLSACRVSGHVELGTYAAEMAISCDPADSGSYILLSN 768
Query: 545 LFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKE 604
+F S GMW R MD R+ KEPGWS +E++ V F+A D +H S I L
Sbjct: 769 IFASKGMWASVRMVREKMDMSRVVKEPGWSWIEVNNEVHRFIARDTAHRDSTLISLVLDN 828
Query: 605 LHIKLLEAGYIAEA 618
L +++ GY+ A
Sbjct: 829 LILQIKGFGYVPNA 842
Score = 202 bits (513), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 113/382 (29%), Positives = 215/382 (56%), Gaps = 9/382 (2%)
Query: 50 KRVHSHVLKVGFQQ-DAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAH 108
K++H+H++ +GF Q D F+ L+ YSK + ++K+ D MP R++V+W+S++S +
Sbjct: 71 KKIHAHIVVLGFHQHDVFLVNTLLHAYSKMNLQSDAQKLFDTMP--HRNLVTWSSMVSMY 128
Query: 109 SRACLNDEAILVL-KEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNN 163
++ + EA+L+ + M + + SVV C+ Q + +H V K G +
Sbjct: 129 TQHGYSVEALLLFCRFMRSCSEKPNEYILASVVRACTQLGNLSQALQLHGFVVKGGFVQ- 187
Query: 164 EIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMR 223
++ + S++ YAK G V+EAR IFD + + V+WT II GY +G + L NQMR
Sbjct: 188 DVYVGTSLIDFYAKRGYVDEARLIFDGLKVKTTVTWTAIIAGYAKLGRSEVSLKLFNQMR 247
Query: 224 RMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLE 283
V PD V +++ C+ + L +H +L+ G++ + + N ++ Y KC ++
Sbjct: 248 EGDVYPDRYVISSVLSACSMLEFLEGGKQIHGYVLRRGFDMDVSVVNGIIDFYLKCHKVK 307
Query: 284 LARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACA 343
R++F+ +++K V WT+MI G Q + +A++LF +++ +P+ + L++C
Sbjct: 308 TGRKLFNRLVDKDVVSWTTMIAGCMQNSFHGDAMDLFVEMVRKGWKPDAFGCTSVLNSCG 367
Query: 344 ELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSA 403
L +L KG+++ Y + ++++ V+ LI M++KC + A++VF+ V ++ ++A
Sbjct: 368 SLQALQKGRQVHAYAIKVNIDNDDFVKNGLIDMYAKCDSLTNARKVFDLVAAINVVSYNA 427
Query: 404 MINGYAIHGMGDQALNLFYKMQ 425
MI GY+ +AL+LF +M+
Sbjct: 428 MIEGYSRQDKLVEALDLFREMR 449
Score = 196 bits (499), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 128/460 (27%), Positives = 221/460 (48%), Gaps = 48/460 (10%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI N + + + M++ G ++F VL +C ++ ++ G++VH++ +KV
Sbjct: 327 MIAGCMQNSFHGDAMDLFVEMVRKGWKPDAFGCTSVLNSCGSLQALQKGRQVHAYAIKVN 386
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
D FV+ GLIDMY+KC ++RKV D V +VVS+N++I +SR EA+ +
Sbjct: 387 IDNDDFVKNGLIDMYAKCDSLTNARKVFD--LVAAINVVSYNAMIEGYSRQDKLVEALDL 444
Query: 121 LKEMWVLGLELSASTFVSVV-------SGCSFRQGISMHCCVYKLGLLNNEIPLANSVMS 173
+EM L LS T ++ V S +HC + K G+ + ++++
Sbjct: 445 FREM---RLSLSPPTLLTFVSLLGLSSSLFLLELSSQIHCLIIKFGVSLDSFA-GSALID 500
Query: 174 MYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVV 233
+Y+K V +AR +F+EI + IV W + GY E+ L ++ + P+
Sbjct: 501 VYSKCSCVGDARLVFEEIYDRDIVVWNAMFSGYSQQLENEESLKLYKDLQMSRLKPNEFT 560
Query: 234 FLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVL 293
F +I + + +L H+ ++K G +++ + N LV MY KCG +E + + F +
Sbjct: 561 FAAVIAAASNIASLRHGQQFHNQVIKMGLDDDPFVTNSLVDMYAKCGSIEESHKAFSSTN 620
Query: 294 EKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKE 353
++ + W SMI YAQ G ++A+ +F+R++ V+PN T LSAC+ G L G
Sbjct: 621 QRDIACWNSMISTYAQHGDAAKALEVFERMIMEGVKPNYVTFVGLLSACSHAGLLDLGFH 680
Query: 354 IEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGM 413
E + G+E ++ + + G+I +AKE +++P
Sbjct: 681 HFESMSKFGIEPGIDHYACMVSLLGRAGKIYEAKEFVKKMP------------------- 721
Query: 414 GDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDG 453
+KP AVV+ S+LSAC SG V+ G
Sbjct: 722 ----------------IKPAAVVWRSLLSACRVSGHVELG 745
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 144/573 (25%), Positives = 271/573 (47%), Gaps = 30/573 (5%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQT-GVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKV 59
M+ T +G E L + +++ N + V++AC + ++ ++H V+K
Sbjct: 124 MVSMYTQHGYSVEALLLFCRFMRSCSEKPNEYILASVVRACTQLGNLSQALQLHGFVVKG 183
Query: 60 GFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAIL 119
GF QD +V T LID Y+K +R + D + V ++ V+W +II+ +++ ++ ++
Sbjct: 184 GFVQDVYVGTSLIDFYAKRGYVDEARLIFDGLKV--KTTVTWTAIIAGYAKLGRSEVSLK 241
Query: 120 VLKEMWVLGLELSASTFVSVVSGCSFRQ----GISMHCCVYKLGLLNNEIPLANSVMSMY 175
+ +M + SV+S CS + G +H V + G + ++ + N ++ Y
Sbjct: 242 LFNQMREGDVYPDRYVISSVLSACSMLEFLEGGKQIHGYVLRRG-FDMDVSVVNGIIDFY 300
Query: 176 AKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFL 235
K KV R +F+ + + +VSWTT+I G + +A L +M R PD
Sbjct: 301 LKCHKVKTGRKLFNRLVDKDVVSWTTMIAGCMQNSFHGDAMDLFVEMVRKGWKPDAFGCT 360
Query: 236 NLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEK 295
+++ C + L +H+ +K +N+D + N L+ MY KC L AR+VFD V
Sbjct: 361 SVLNSCGSLQALQKGRQVHAYAIKVNIDNDDFVKNGLIDMYAKCDSLTNARKVFDLVAAI 420
Query: 296 SVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIE 355
+V + +MI GY++ EA++LF+ + + P T + L + L L +I
Sbjct: 421 NVVSYNAMIEGYSRQDKLVEALDLFREMRLSLSPPTLLTFVSLLGLSSSLFLLELSSQIH 480
Query: 356 EYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGD 415
I+ G+ + ++LI ++SKC + A+ VFE + D+D+ VW+AM +GY+ +
Sbjct: 481 CLIIKFGVSLDSFAGSALIDVYSKCSCVGDARLVFEEIYDRDIVVWNAMFSGYSQQLENE 540
Query: 416 QALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFF-KSMQSNFGIEPSIEHYL 474
++L L+ +Q + LKP+ + ++++A S+ + G F + ++ +P + +
Sbjct: 541 ESLKLYKDLQ-MSRLKPNEFTFAAVIAAASNIASLRHGQQFHNQVIKMGLDDDPFVTN-- 597
Query: 475 CLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLN-- 532
LVD+ + G + + K + W ++S +H + AAK L
Sbjct: 598 SLVDMYAKCGSIEESHKAFSSTN-QRDIACWNSMISTYAQHGD------AAKALEVFERM 650
Query: 533 --PGSTGNYILMANLFTSAGMWKEAATARGLMD 563
G NY+ L + A + GL+D
Sbjct: 651 IMEGVKPNYVTFVGLLS-------ACSHAGLLD 676
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 73/147 (49%), Gaps = 12/147 (8%)
Query: 320 FKRLLKTSVRPNEATLATTLSACAELGSLSK-----------GKEIEEYIVLNGL-ESNR 367
F LL ++P+++ + ELG L + K+I +IV+ G + +
Sbjct: 28 FSTLLPPFLQPHDSPILIQRKIGRELGKLLQLPSPNILTSHYYKKIHAHIVVLGFHQHDV 87
Query: 368 QVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHV 427
+ +L+H +SK + A+++F+ +P ++L WS+M++ Y HG +AL LF +
Sbjct: 88 FLVNTLLHAYSKMNLQSDAQKLFDTMPHRNLVTWSSMVSMYTQHGYSVEALLLFCRFMRS 147
Query: 428 EGLKPDAVVYTSILSACSHSGMVDDGL 454
KP+ + S++ AC+ G + L
Sbjct: 148 CSEKPNEYILASVVRACTQLGNLSQAL 174
>gi|225448607|ref|XP_002274158.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Vitis vinifera]
Length = 820
Score = 380 bits (977), Expect = e-102, Method: Compositional matrix adjust.
Identities = 206/624 (33%), Positives = 348/624 (55%), Gaps = 11/624 (1%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI ST +G F + + ML +G+ + F + ++++C ++S+ GK VH+ ++ G
Sbjct: 192 MIVGSTEHGLFFDGFKFFCEMLNSGILPDKFAYSAIIQSCIGLDSLELGKMVHAQIVMRG 251
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F FV T L++MY+K S V + M + VSWN++IS + L+ EA +
Sbjct: 252 FATHIFVSTSLLNMYAKLGSIEDSYWVFNMMTEH--NQVSWNAMISGCTSNGLHLEAFDL 309
Query: 121 LKEMWVLGLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
M + T VSV G + C +LG+ N + + +++ MY+
Sbjct: 310 FVRMKNGACTPNMYTLVSVSKAVGKLVDVNMGKEVQNCASELGIEGN-VLVGTALIDMYS 368
Query: 177 KFGKVNEARSIFDE--IGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVF 234
K G +++ARS+FD I W +I GY G EA L QM + +T DL +
Sbjct: 369 KCGSLHDARSVFDTNFINCGVNTPWNAMISGYSQSGCSQEALELYVQMCQNGITSDLYTY 428
Query: 235 LNLILGCAQVGNLFLALSMHSLLLKSGYN-NEDPLDNLLVSMYTKCGDLELARRVFDAVL 293
++ A +L +H ++LK G + ++N + Y+KCG LE R+VFD +
Sbjct: 429 CSVFNAIAASKSLQFGRVVHGMVLKCGLDLMVVSVNNAIADAYSKCGFLEDVRKVFDRME 488
Query: 294 EKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKE 353
E+ + WT+++ Y+Q EA+ F + + PN+ T ++ L +CA L L G++
Sbjct: 489 ERDIVSWTTLVTAYSQSSLGEEALATFCLMREEGFAPNQFTFSSVLISCASLCFLEYGRQ 548
Query: 354 IEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGM 413
+ + GL++ + ++++LI M++KCG I +A +VF+++ + D+ W+A+I+GYA HG+
Sbjct: 549 VHGLLCKAGLDTEKCIESALIDMYAKCGSITEAGKVFDKISNPDIVSWTAIISGYAQHGL 608
Query: 414 GDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHY 473
+ AL LF +M+ + G+K +AV +L ACSH GMV++GL +F+ M+ +G+ P +EHY
Sbjct: 609 VEDALQLFRRME-LSGIKANAVTLLCVLFACSHGGMVEEGLFYFQQMEDGYGVVPEMEHY 667
Query: 474 LCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNP 533
C++DLLGR GR D A++ I +MP+E VW LL C H NVELGE AA+ +L++ P
Sbjct: 668 ACIIDLLGRVGRLDDAMEFIRKMPMEPNEMVWQTLLGGCRVHGNVELGEIAARKILSIRP 727
Query: 534 GSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHH 593
+ Y+L++N + G +++ + R +M D+ + KEPG+S + + G V F +GD+ H
Sbjct: 728 EYSATYVLLSNTYIETGSYEDGLSLRNVMKDQGVKKEPGYSWISVKGRVHKFYSGDQQHP 787
Query: 594 LSVDIRKTLKELHIKLLEAGYIAE 617
+I L+EL K+ GY+ +
Sbjct: 788 QKKEIYVKLEELREKIKAMGYVPD 811
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 131/496 (26%), Positives = 238/496 (47%), Gaps = 21/496 (4%)
Query: 36 VLKACANINSIWDGKRVHSHVLKVGFQ-QDAFVQ-TGLIDMYSKCSDFVSSRKVLDEMPV 93
VL+ CA SI + K VH VLK F+ +D V +YSKCS+F ++ V DEMP
Sbjct: 124 VLRDCAEKGSIREAKAVHGLVLKSNFEDKDLMVLFNHAAHVYSKCSEFRAACGVFDEMP- 182
Query: 94 RLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGC----SFRQGI 149
R+V SW +I + L + EM G+ + +++ C S G
Sbjct: 183 -QRNVFSWTVMIVGSTEHGLFFDGFKFFCEMLNSGILPDKFAYSAIIQSCIGLDSLELGK 241
Query: 150 SMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNV 209
+H + G + I ++ S+++MYAK G + ++ +F+ + E + VSW +I G +
Sbjct: 242 MVHAQIVMRGFATH-IFVSTSLLNMYAKLGSIEDSYWVFNMMTEHNQVSWNAMISGCTSN 300
Query: 210 GNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLD 269
G EAF L +M+ + TP++ +++ ++ ++ + + + + G +
Sbjct: 301 GLHLEAFDLFVRMKNGACTPNMYTLVSVSKAVGKLVDVNMGKEVQNCASELGIEGNVLVG 360
Query: 270 NLLVSMYTKCGDLELARRVFDAVLEKSVF--LWTSMIGGYAQLGYPSEAVNLFKRLLKTS 327
L+ MY+KCG L AR VFD W +MI GY+Q G EA+ L+ ++ +
Sbjct: 361 TALIDMYSKCGSLHDARSVFDTNFINCGVNTPWNAMISGYSQSGCSQEALELYVQMCQNG 420
Query: 328 VRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLE-SNRQVQTSLIHMFSKCGRINKA 386
+ + T + +A A SL G+ + ++ GL+ V ++ +SKCG +
Sbjct: 421 ITSDLYTYCSVFNAIAASKSLQFGRVVHGMVLKCGLDLMVVSVNNAIADAYSKCGFLEDV 480
Query: 387 KEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSH 446
++VF+R+ ++D+ W+ ++ Y+ +G++AL F M+ EG P+ ++S+L +C+
Sbjct: 481 RKVFDRMEERDIVSWTTLVTAYSQSSLGEEALATFCLMRE-EGFAPNQFTFSSVLISCAS 539
Query: 447 SGMVDDGLSFFKSM-QSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEM--PVEVQAQ 503
++ G + ++ E IE L+D+ + G A K ++ P V
Sbjct: 540 LCFLEYGRQVHGLLCKAGLDTEKCIES--ALIDMYAKCGSITEAGKVFDKISNPDIVS-- 595
Query: 504 VWAPLLSACMKHHNVE 519
W ++S +H VE
Sbjct: 596 -WTAIISGYAQHGLVE 610
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 142/276 (51%), Gaps = 8/276 (2%)
Query: 211 NVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNED--PL 268
N E+ G+ ++ V DL+ +++ CA+ G++ A ++H L+LKS + ++D L
Sbjct: 102 NRPESIGISETYQQTQVQ-DLI---DVLRDCAEKGSIREAKAVHGLVLKSNFEDKDLMVL 157
Query: 269 DNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSV 328
N +Y+KC + A VFD + +++VF WT MI G + G + F +L + +
Sbjct: 158 FNHAAHVYSKCSEFRAACGVFDEMPQRNVFSWTVMIVGSTEHGLFFDGFKFFCEMLNSGI 217
Query: 329 RPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKE 388
P++ + + +C L SL GK + IV+ G ++ V TSL++M++K G I +
Sbjct: 218 LPDKFAYSAIIQSCIGLDSLELGKMVHAQIVMRGFATHIFVSTSLLNMYAKLGSIEDSYW 277
Query: 389 VFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSG 448
VF + + + W+AMI+G +G+ +A +LF +M++ P+ S+ A
Sbjct: 278 VFNMMTEHNQVSWNAMISGCTSNGLHLEAFDLFVRMKN-GACTPNMYTLVSVSKAVGKLV 336
Query: 449 MVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAG 484
V+ G ++ S GIE ++ L+D+ + G
Sbjct: 337 DVNMGKE-VQNCASELGIEGNVLVGTALIDMYSKCG 371
>gi|357520433|ref|XP_003630505.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355524527|gb|AET04981.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 998
Score = 380 bits (976), Expect = e-102, Method: Compositional matrix adjust.
Identities = 211/623 (33%), Positives = 347/623 (55%), Gaps = 9/623 (1%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+I + G + +L + M + V + + VL AC + + GK++H +VL+ G
Sbjct: 213 IIAGYSKQGRSQVSLKLFDQMKEGHVCPDKYVLSSVLSACLMLKFLEGGKQIHCYVLRSG 272
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
D + G ID Y KC RK+ D M + +VVSW ++I+ + + +A+ +
Sbjct: 273 IVMDVSMVNGFIDFYFKCHKVQLGRKLFDRMVDK--NVVSWTTVIAGCMQNSFHRDALDL 330
Query: 121 LKEMWVLGLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
EM +G A SV++ C + +G +H K+ + N++ + N ++ MYA
Sbjct: 331 FVEMARMGWNPDAFGCTSVLNSCGSLVALEKGRQVHAYAIKVNIDNDDF-VKNGLIDMYA 389
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K + +AR +F+ + +VS+ +I GY + EA L +MR +P L++F++
Sbjct: 390 KCDSLTDARKVFNLMAAIDLVSYNAMIEGYSRQDKLCEALDLFREMRLSLSSPTLLIFVS 449
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
L+ A + +L L+ +H L++K G + ++ + L+ +Y+KC + AR VF+ + +K
Sbjct: 450 LLGVSASLYHLELSNQIHGLIIKYGVSLDEFAGSALIDVYSKCSRVGDARLVFEEIQDKD 509
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEE 356
+ +WT+M GY Q E++ L+K L + ++PNE T A ++A + + SL G++
Sbjct: 510 IVVWTAMFSGYTQQSENEESLKLYKCLQMSRLKPNEFTFAAVITAASNIASLRHGQQFHN 569
Query: 357 YIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQ 416
++ G + + V +L+ M++K G I +A + F KD A W++MI YA HG ++
Sbjct: 570 QVIKMGFDDDPFVANTLVDMYAKSGSIEEAHKAFISTNWKDTACWNSMIATYAQHGEAEK 629
Query: 417 ALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCL 476
AL +F M +EGLKP+ V + +LSACSH+G++D G F SM S FGIEP IEHY+C+
Sbjct: 630 ALQVFEDMI-MEGLKPNYVTFVGVLSACSHTGLLDLGFDHFDSM-SQFGIEPGIEHYVCM 687
Query: 477 VDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGST 536
V LLGRAG+ A + I +MP++ A VW LLSAC NVELG YAA+ ++ NP +
Sbjct: 688 VSLLGRAGKLYEAKEFIEKMPIKQAAVVWRSLLSACRVSGNVELGTYAAEMAISCNPADS 747
Query: 537 GNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSV 596
G+Y+L++N+F S GMW R MD + KEPG S +E++ + F+A D +H S
Sbjct: 748 GSYVLLSNIFASKGMWVNVRRLREKMDISGVVKEPGCSWIEVNNEIHKFIAKDTAHRDSA 807
Query: 597 DIRKTLKELHIKLLEAGYIAEAD 619
I L L +++ GY+A D
Sbjct: 808 PISLVLDNLLLQIKGFGYMANTD 830
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 140/545 (25%), Positives = 260/545 (47%), Gaps = 31/545 (5%)
Query: 29 NSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVL 88
N + V++AC + ++H V+K G+ QD +V T LID Y+K + +R +
Sbjct: 140 NEYILASVVRACTQFGGLNPALQIHGLVVKGGYVQDVYVCTSLIDFYTKHACIDDARLLF 199
Query: 89 DEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEM---------WVLGLELSASTFVSV 139
D + V ++ +W +II+ +S+ + ++ + +M +VL LSA +
Sbjct: 200 DGLQV--KTSFTWTTIIAGYSKQGRSQVSLKLFDQMKEGHVCPDKYVLSSVLSACLMLKF 257
Query: 140 VSGCSFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSW 199
+ G G +HC V + G++ ++ + N + Y K KV R +FD + + ++VSW
Sbjct: 258 LEG-----GKQIHCYVLRSGIV-MDVSMVNGFIDFYFKCHKVQLGRKLFDRMVDKNVVSW 311
Query: 200 TTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLK 259
TT+I G + +A L +M RM PD +++ C + L +H+ +K
Sbjct: 312 TTVIAGCMQNSFHRDALDLFVEMARMGWNPDAFGCTSVLNSCGSLVALEKGRQVHAYAIK 371
Query: 260 SGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNL 319
+N+D + N L+ MY KC L AR+VF+ + + + +MI GY++ EA++L
Sbjct: 372 VNIDNDDFVKNGLIDMYAKCDSLTDARKVFNLMAAIDLVSYNAMIEGYSRQDKLCEALDL 431
Query: 320 FKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSK 379
F+ + + P + L A L L +I I+ G+ + ++LI ++SK
Sbjct: 432 FREMRLSLSSPTLLIFVSLLGVSASLYHLELSNQIHGLIIKYGVSLDEFAGSALIDVYSK 491
Query: 380 CGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTS 439
C R+ A+ VFE + DKD+ VW+AM +GY +++L L YK + LKP+ + +
Sbjct: 492 CSRVGDARLVFEEIQDKDIVVWTAMFSGYTQQSENEESLKL-YKCLQMSRLKPNEFTFAA 550
Query: 440 ILSACSHSGMVDDGLSFFKS-MQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPV 498
+++A S+ + G F ++ F +P + + LVD+ ++G + A K
Sbjct: 551 VITAASNIASLRHGQQFHNQVIKMGFDDDPFVAN--TLVDMYAKSGSIEEAHKAFISTNW 608
Query: 499 EVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATA 558
+ A W +++ +H E ++++ G NY+ + + A +
Sbjct: 609 KDTA-CWNSMIATYAQHGEAEKALQVFEDMIM--EGLKPNYVTFVGVLS-------ACSH 658
Query: 559 RGLMD 563
GL+D
Sbjct: 659 TGLLD 663
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 109/399 (27%), Positives = 209/399 (52%), Gaps = 12/399 (3%)
Query: 50 KRVHSHVLKVGFQQ-DAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIIS-- 106
K++HS ++ GF + D F+ L+ YSK + + K+ D M +++V+W+S++S
Sbjct: 58 KKIHSKIVVFGFHKHDIFLVNTLLHAYSKLNLVNHANKLFDTMS--HKNLVTWSSMVSMY 115
Query: 107 AHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLN 162
H CL + +L ++ M + + SVV C+ + +H V K G +
Sbjct: 116 THHSHCL-EALMLFVQFMRSCNEKPNEYILASVVRACTQFGGLNPALQIHGLVVKGGYVQ 174
Query: 163 NEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQM 222
++ + S++ Y K +++AR +FD + + +WTTII GY G + L +QM
Sbjct: 175 -DVYVCTSLIDFYTKHACIDDARLLFDGLQVKTSFTWTTIIAGYSKQGRSQVSLKLFDQM 233
Query: 223 RRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDL 282
+ V PD V +++ C + L +H +L+SG + + N + Y KC +
Sbjct: 234 KEGHVCPDKYVLSSVLSACLMLKFLEGGKQIHCYVLRSGIVMDVSMVNGFIDFYFKCHKV 293
Query: 283 ELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSAC 342
+L R++FD +++K+V WT++I G Q + +A++LF + + P+ + L++C
Sbjct: 294 QLGRKLFDRMVDKNVVSWTTVIAGCMQNSFHRDALDLFVEMARMGWNPDAFGCTSVLNSC 353
Query: 343 AELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWS 402
L +L KG+++ Y + ++++ V+ LI M++KC + A++VF + DL ++
Sbjct: 354 GSLVALEKGRQVHAYAIKVNIDNDDFVKNGLIDMYAKCDSLTDARKVFNLMAAIDLVSYN 413
Query: 403 AMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSIL 441
AMI GY+ +AL+LF +M+ + P +++ S+L
Sbjct: 414 AMIEGYSRQDKLCEALDLFREMR-LSLSSPTLLIFVSLL 451
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 66/142 (46%), Gaps = 7/142 (4%)
Query: 320 FKRLLKTSVRPNEATLATTLSACAELGSLSKG------KEIEEYIVLNGLESNRQ-VQTS 372
F LL + P + EL +L + K+I IV+ G + + +
Sbjct: 20 FSTLLHQFLEPRIPPIIEQRKIGRELANLLQSPHIPCCKKIHSKIVVFGFHKHDIFLVNT 79
Query: 373 LIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKP 432
L+H +SK +N A ++F+ + K+L WS+M++ Y H +AL LF + KP
Sbjct: 80 LLHAYSKLNLVNHANKLFDTMSHKNLVTWSSMVSMYTHHSHCLEALMLFVQFMRSCNEKP 139
Query: 433 DAVVYTSILSACSHSGMVDDGL 454
+ + S++ AC+ G ++ L
Sbjct: 140 NEYILASVVRACTQFGGLNPAL 161
>gi|225441775|ref|XP_002277828.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g33680-like [Vitis vinifera]
Length = 773
Score = 380 bits (976), Expect = e-102, Method: Compositional matrix adjust.
Identities = 215/610 (35%), Positives = 339/610 (55%), Gaps = 11/610 (1%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+I+ E M G N T ++L+AC ++ ++ G+++H V+K G
Sbjct: 150 LIKGHLQVNDVESVFRIAREMYWVGEEFNEHTCSVILQACDSLENLVRGEQIHGFVIKRG 209
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F +D FV T LI MYS+C D ++ KV + + V N +IS + +A ++AI V
Sbjct: 210 FDEDVFVGTSLISMYSRCGDLGAAEKVYSNLA--YKDVRCLNFMISEYGKAGCGEKAIGV 267
Query: 121 LKEMWVLGLELSASTFVSVVSGCSFRQGIS----MHCCVYKLGLLNNEIPLANSVMSMYA 176
+ GLE + TF +V+S C+ + +H K G +EI + N+++S+Y
Sbjct: 268 FLHLLGSGLEPNDYTFTNVISACNGDIDVEVLRVLHGMCIKCGC-GDEISVGNAIVSVYV 326
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K G + EA F +GE ++VSWT ++ GYV GN +A +Q+ + V D F
Sbjct: 327 KHGMLEEAEKSFCGMGERNLVSWTALLSGYVKNGNGKKALEGFSQILELGVGFDSCCFAT 386
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
L+ GC++ NL L L +H ++K GY ++ + L+ +Y KC L AR VF ++L+K+
Sbjct: 387 LLDGCSECKNLGLGLQIHGFVVKLGYVHDVSVGTALIDLYAKCRKLRSARLVFHSLLDKN 446
Query: 297 VFLWTSMIGGYAQLGYPSE-AVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIE 355
+ + +++ GY +G E A+ LF +L ++P+ T A LS A+ L KGK +
Sbjct: 447 IVSFNAILSGY--IGADEEDAMALFSQLRLADIKPDSVTFARLLSLSADQACLVKGKCLH 504
Query: 356 EYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGD 415
YI+ G E+N V ++I M++KCG I A ++F + D W+A+I+ YA+HG G
Sbjct: 505 AYIIKTGFEANPSVGNAVITMYAKCGSIGDACQLFYSMNYLDSISWNAVISAYALHGQGR 564
Query: 416 QALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLC 475
+AL LF +M+ E PD + S+L ACS+SG++++G F M+S +GI+P IEH+ C
Sbjct: 565 KALILFEEMKKEE-FVPDEITILSVLQACSYSGLLEEGFCLFNDMESKYGIKPEIEHFAC 623
Query: 476 LVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGS 535
+VDLLGRAG A+ I+ P +W L+ C H ++ G+ A+K+LL L P
Sbjct: 624 MVDLLGRAGYLSEAMSFINRSPFSGSPLLWRTLVHVCKLHGDLNFGQIASKHLLDLAPEE 683
Query: 536 TGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLS 595
G+YIL++NL+ GM EAA R +M+D +++KE G S +EID V FVA D+ H S
Sbjct: 684 AGSYILVSNLYAGGGMLNEAARVRTVMNDLKVSKEAGSSWIEIDNKVHQFVASDKDHPES 743
Query: 596 VDIRKTLKEL 605
+I L L
Sbjct: 744 KEIYAKLDLL 753
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 118/488 (24%), Positives = 244/488 (50%), Gaps = 13/488 (2%)
Query: 33 FPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMP 92
+P +L+ + G+ +H+ + K+G+Q DAF L+++Y K + ++ V DEM
Sbjct: 81 WPQLLQISIGSGDLMLGQAIHAFLAKLGYQNDAFRGNNLVNLYGKFNKLGDAQSVFDEML 140
Query: 93 VRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGC----SFRQG 148
V R+ ++W ++I H + + + +EM+ +G E + T ++ C + +G
Sbjct: 141 V--RNTITWTTLIKGHLQVNDVESVFRIAREMYWVGEEFNEHTCSVILQACDSLENLVRG 198
Query: 149 ISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVN 208
+H V K G + ++ + S++SMY++ G + A ++ + + +I Y
Sbjct: 199 EQIHGFVIKRG-FDEDVFVGTSLISMYSRCGDLGAAEKVYSNLAYKDVRCLNFMISEYGK 257
Query: 209 VGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPL 268
G +A G+ + + P+ F N+I C ++ + +H + +K G +E +
Sbjct: 258 AGCGEKAIGVFLHLLGSGLEPNDYTFTNVISACNGDIDVEVLRVLHGMCIKCGCGDEISV 317
Query: 269 DNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSV 328
N +VS+Y K G LE A + F + E+++ WT+++ GY + G +A+ F ++L+ V
Sbjct: 318 GNAIVSVYVKHGMLEEAEKSFCGMGERNLVSWTALLSGYVKNGNGKKALEGFSQILELGV 377
Query: 329 RPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKE 388
+ AT L C+E +L G +I ++V G + V T+LI +++KC ++ A+
Sbjct: 378 GFDSCCFATLLDGCSECKNLGLGLQIHGFVVKLGYVHDVSVGTALIDLYAKCRKLRSARL 437
Query: 389 VFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSG 448
VF + DK++ ++A+++GY I + A+ LF +++ + +KPD+V + +LS +
Sbjct: 438 VFHSLLDKNIVSFNAILSGY-IGADEEDAMALFSQLRLAD-IKPDSVTFARLLSLSADQA 495
Query: 449 MVDDGLSFFKS-MQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAP 507
+ G +++ F PS+ + ++ + + G A + + M + + W
Sbjct: 496 CLVKGKCLHAYIIKTGFEANPSVGN--AVITMYAKCGSIGDACQLFYSMNY-LDSISWNA 552
Query: 508 LLSACMKH 515
++SA H
Sbjct: 553 VISAYALH 560
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 81/274 (29%), Positives = 140/274 (51%), Gaps = 5/274 (1%)
Query: 245 GNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMI 304
G+L L ++H+ L K GY N+ N LV++Y K L A+ VFD +L ++ WT++I
Sbjct: 92 GDLMLGQAIHAFLAKLGYQNDAFRGNNLVNLYGKFNKLGDAQSVFDEMLVRNTITWTTLI 151
Query: 305 GGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLE 364
G+ Q+ + + + NE T + L AC L +L +G++I +++ G +
Sbjct: 152 KGHLQVNDVESVFRIAREMYWVGEEFNEHTCSVILQACDSLENLVRGEQIHGFVIKRGFD 211
Query: 365 SNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKM 424
+ V TSLI M+S+CG + A++V+ + KD+ + MI+ Y G G++A+ +F +
Sbjct: 212 EDVFVGTSLISMYSRCGDLGAAEKVYSNLAYKDVRCLNFMISEYGKAGCGEKAIGVFLHL 271
Query: 425 QHVEGLKPDAVVYTSILSACSHSGMVD-DGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRA 483
GL+P+ +T+++SAC +G +D + L M G I +V + +
Sbjct: 272 LG-SGLEPNDYTFTNVISAC--NGDIDVEVLRVLHGMCIKCGCGDEISVGNAIVSVYVKH 328
Query: 484 GRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHN 517
G + A K+ M E W LLS +K+ N
Sbjct: 329 GMLEEAEKSFCGMG-ERNLVSWTALLSGYVKNGN 361
>gi|225450539|ref|XP_002277347.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 808
Score = 380 bits (975), Expect = e-102, Method: Compositional matrix adjust.
Identities = 214/652 (32%), Positives = 343/652 (52%), Gaps = 70/652 (10%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
M+R + S E+ L Y M++ V +++T+PLV++ACA + GK +H HVLKVG
Sbjct: 112 MMRAYIQSNSAEKALLLYKLMVKNNVGPDNYTYPLVVQACAVRLLEFGGKEIHDHVLKVG 171
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F D +VQ LI+MY+ C + +RK+ DE PV VSWNSI++ + + +EA L+
Sbjct: 172 FDSDVYVQNTLINMYAVCGNMRDARKLFDESPVL--DSVSWNSILAGYVKKGDVEEAKLI 229
Query: 121 LKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGK 180
+M I +NS++ + K G+
Sbjct: 230 FDQM------------------------------------PQRNIVASNSMIVLLGKMGQ 253
Query: 181 VNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILG 240
V EA +F+E+ E +VSW+ +I GY G EA + +M + D VV ++++
Sbjct: 254 VMEAWKLFNEMDEKDMVSWSALISGYEQNGMYEEALVMFIEMNANGMRLDEVVVVSVLSA 313
Query: 241 CAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYT----------------------- 277
CA + + +H L+++ G + L N L+ MY+
Sbjct: 314 CAHLSIVKTGKMIHGLVIRMGIESYVNLQNALIHMYSGSGEIMDAQKLFNGSHNLDQISW 373
Query: 278 --------KCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVR 329
KCG +E AR +FD + EK + W+++I GYAQ SE + LF + +R
Sbjct: 374 NSMISGCMKCGSVEKARALFDVMPEKDIVSWSAVISGYAQHDCFSETLALFHEMQLGQIR 433
Query: 330 PNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEV 389
P+E L + +SAC L +L +GK + YI NGL+ N + T+L+ M+ KCG + A EV
Sbjct: 434 PDETILVSVISACTHLAALDQGKWVHAYIRKNGLKVNVILGTTLLDMYMKCGCVENALEV 493
Query: 390 FERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGM 449
F + +K ++ W+A+I G A++G+ +++L++F +M++ G+ P+ + + +L AC H G+
Sbjct: 494 FNGMEEKGVSSWNALIIGLAVNGLVERSLDMFSEMKN-NGVIPNEITFMGVLGACRHMGL 552
Query: 450 VDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLL 509
VD+G F SM GIEP+++HY C+VDLLGRAG + A K I MP+ W LL
Sbjct: 553 VDEGRCHFASMIEKHGIEPNVKHYGCMVDLLGRAGLLNEAEKLIESMPMAPDVATWGALL 612
Query: 510 SACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTK 569
AC KH + E+GE + L+ L P G ++L++N+F S G W++ RG+M + + K
Sbjct: 613 GACKKHGDTEMGERVGRKLIELQPDHDGFHVLLSNIFASKGDWEDVLEVRGMMKQQGVVK 672
Query: 570 EPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKELHIKLLEAGYIAEADIV 621
PG S +E +G V F+AGD++H + L E+ +L GY + + V
Sbjct: 673 TPGCSLIEANGVVHEFLAGDKTHPWINKVEGMLNEMAKRLKMEGYAPDTNEV 724
Score = 115 bits (287), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 87/344 (25%), Positives = 157/344 (45%), Gaps = 42/344 (12%)
Query: 176 AKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFL 235
+ F ++ + IFD I ++ W T++ Y+ + +A L M + +V PD +
Sbjct: 86 SPFIGLDYSLQIFDRIENSNGFMWNTMMRAYIQSNSAEKALLLYKLMVKNNVGPDNYTYP 145
Query: 236 NLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEK 295
++ CA F +H +LK G++++ + N L++MY CG++ AR++FD
Sbjct: 146 LVVQACAVRLLEFGGKEIHDHVLKVGFDSDVYVQNTLINMYAVCGNMRDARKLFDESPVL 205
Query: 296 SVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIE 355
W S++ GY + G EA +F ++ P +A+
Sbjct: 206 DSVSWNSILAGYVKKGDVEEAKLIFDQM------PQRNIVAS------------------ 241
Query: 356 EYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGD 415
S+I + K G++ +A ++F + +KD+ WSA+I+GY +GM +
Sbjct: 242 ---------------NSMIVLLGKMGQVMEAWKLFNEMDEKDMVSWSALISGYEQNGMYE 286
Query: 416 QALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLC 475
+AL +F +M + G++ D VV S+LSAC+H +V G + GIE +
Sbjct: 287 EALVMFIEM-NANGMRLDEVVVVSVLSACAHLSIVKTG-KMIHGLVIRMGIESYVNLQNA 344
Query: 476 LVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVE 519
L+ + +G A K + + W ++S CMK +VE
Sbjct: 345 LIHMYSGSGEIMDAQKLFNG-SHNLDQISWNSMISGCMKCGSVE 387
>gi|449467092|ref|XP_004151259.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like [Cucumis sativus]
Length = 849
Score = 380 bits (975), Expect = e-102, Method: Compositional matrix adjust.
Identities = 218/631 (34%), Positives = 349/631 (55%), Gaps = 14/631 (2%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
M+ NN L T+ M++ G + N + F +AC+ + G + V+K G
Sbjct: 139 MVSCFANNNMGFRALLTFVDMIENGYYPNEYCFAAATRACSTAEFVSVGDSIFGFVVKTG 198
Query: 61 F-QQDAFVQTGLIDMYSKC-SDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAI 118
+ Q D V GLIDM+ K D VS+ KV ++MP R + V+W +I+ + EAI
Sbjct: 199 YLQSDVCVGCGLIDMFVKGRGDLVSAFKVFEKMPER--NAVTWTLMITRLMQFGYAGEAI 256
Query: 119 LVLKEMWVLGLELSASTFVSVVSGCSFRQ----GISMHCCVYKLGLLNNEIPLANSVMSM 174
+ EM + G E T V+S C+ + G +H + GL + + +++M
Sbjct: 257 DLFLEMILSGYEPDRFTLSGVISACANMELLLLGQQLHSQAIRHGLTLDRC-VGCCLINM 315
Query: 175 YAKF---GKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNE-AFGLCNQMRRMSVTPD 230
YAK G + AR IFD+I + ++ SWT +I GYV G +E A L M V P+
Sbjct: 316 YAKCSVDGSMCAARKIFDQILDHNVFSWTAMITGYVQKGGYDEEALDLFRGMILTHVIPN 375
Query: 231 LVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFD 290
F + + CA + L + + + +K G+++ + + N L+SMY + G ++ AR+ FD
Sbjct: 376 HFTFSSTLKACANLAALRIGEQVFTHAVKLGFSSVNCVANSLISMYARSGRIDDARKAFD 435
Query: 291 AVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSK 350
+ EK++ + ++I YA+ EA+ LF + + + T A+ LS A +G++ K
Sbjct: 436 ILFEKNLISYNTVIDAYAKNLNSEEALELFNEIEDQGMGASAFTFASLLSGAASIGTIGK 495
Query: 351 GKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAI 410
G++I ++ +GL+ N+ V +LI M+S+CG I A +VFE + D+++ W+++I G+A
Sbjct: 496 GEQIHARVIKSGLKLNQSVCNALISMYSRCGNIESAFQVFEDMEDRNVISWTSIITGFAK 555
Query: 411 HGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSI 470
HG QAL LF+KM EG++P+ V Y ++LSACSH G+V++G FKSM + G+ P +
Sbjct: 556 HGFATQALELFHKMLE-EGVRPNLVTYIAVLSACSHVGLVNEGWKHFKSMYTEHGVIPRM 614
Query: 471 EHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLT 530
EHY C+VD+LGR+G A++ I+ MP + A VW L AC H N+ELG++AAK ++
Sbjct: 615 EHYACMVDILGRSGSLSEAIQFINSMPYKADALVWRTFLGACRVHGNLELGKHAAKMIIE 674
Query: 531 LNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDR 590
P YIL++NL+ S W E + R M ++ L KE G S VE++ V F GD
Sbjct: 675 QEPHDPAAYILLSNLYASTSKWDEVSNIRKAMKEKNLIKEAGCSWVEVENKVHKFYVGDT 734
Query: 591 SHHLSVDIRKTLKELHIKLLEAGYIAEADIV 621
SH + +I L+ L +K+ + GY+ D V
Sbjct: 735 SHPKAAEIYDELQNLSVKIKKLGYVPNLDFV 765
Score = 219 bits (557), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 146/519 (28%), Positives = 258/519 (49%), Gaps = 15/519 (2%)
Query: 7 NNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAF 66
NNG + +ST M+ G H + T+ L LK C S G VH + + Q D+
Sbjct: 43 NNGRLHKAISTLEHMVHQGSHPDLQTYSLFLKKCIRTRSFDIGTLVHEKLTQSDLQLDSV 102
Query: 67 VQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWV 126
LI +YSKC + + + M R ++SW++++S + + A+L +M
Sbjct: 103 TLNSLISLYSKCGQWEKATSIFQLMGSS-RDLISWSAMVSCFANNNMGFRALLTFVDMIE 161
Query: 127 LGLELSASTFVSVVSGCSFRQ----GISMHCCVYKLGLLNNEIPLANSVMSMYAK-FGKV 181
G + F + CS + G S+ V K G L +++ + ++ M+ K G +
Sbjct: 162 NGYYPNEYCFAAATRACSTAEFVSVGDSIFGFVVKTGYLQSDVCVGCGLIDMFVKGRGDL 221
Query: 182 NEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGC 241
A +F+++ E + V+WT +I + G EA L +M PD +I C
Sbjct: 222 VSAFKVFEKMPERNAVTWTLMITRLMQFGYAGEAIDLFLEMILSGYEPDRFTLSGVISAC 281
Query: 242 AQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKC---GDLELARRVFDAVLEKSVF 298
A + L L +HS ++ G + + L++MY KC G + AR++FD +L+ +VF
Sbjct: 282 ANMELLLLGQQLHSQAIRHGLTLDRCVGCCLINMYAKCSVDGSMCAARKIFDQILDHNVF 341
Query: 299 LWTSMIGGYAQL-GYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEY 357
WT+MI GY Q GY EA++LF+ ++ T V PN T ++TL ACA L +L G+++ +
Sbjct: 342 SWTAMITGYVQKGGYDEEALDLFRGMILTHVIPNHFTFSSTLKACANLAALRIGEQVFTH 401
Query: 358 IVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQA 417
V G S V SLI M+++ GRI+ A++ F+ + +K+L ++ +I+ YA + ++A
Sbjct: 402 AVKLGFSSVNCVANSLISMYARSGRIDDARKAFDILFEKNLISYNTVIDAYAKNLNSEEA 461
Query: 418 LNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFF-KSMQSNFGIEPSIEHYLCL 476
L LF +++ +G+ A + S+LS + G + G + ++S + S+ + L
Sbjct: 462 LELFNEIED-QGMGASAFTFASLLSGAASIGTIGKGEQIHARVIKSGLKLNQSVCN--AL 518
Query: 477 VDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKH 515
+ + R G + A + +M + W +++ KH
Sbjct: 519 ISMYSRCGNIESAFQVFEDME-DRNVISWTSIITGFAKH 556
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 117/243 (48%), Gaps = 4/243 (1%)
Query: 207 VNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNED 266
+N G +++A M PDL + + C + + + +H L +S +
Sbjct: 42 INNGRLHKAISTLEHMVHQGSHPDLQTYSLFLKKCIRTRSFDIGTLVHEKLTQSDLQLDS 101
Query: 267 PLDNLLVSMYTKCGDLELARRVFDAV-LEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLK 325
N L+S+Y+KCG E A +F + + + W++M+ +A A+ F +++
Sbjct: 102 VTLNSLISLYSKCGQWEKATSIFQLMGSSRDLISWSAMVSCFANNNMGFRALLTFVDMIE 161
Query: 326 TSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNG-LESNRQVQTSLIHMFSKC-GRI 383
PNE A AC+ +S G I ++V G L+S+ V LI MF K G +
Sbjct: 162 NGYYPNEYCFAAATRACSTAEFVSVGDSIFGFVVKTGYLQSDVCVGCGLIDMFVKGRGDL 221
Query: 384 NKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSA 443
A +VFE++P+++ W+ MI G +A++LF +M + G +PD + ++SA
Sbjct: 222 VSAFKVFEKMPERNAVTWTLMITRLMQFGYAGEAIDLFLEMI-LSGYEPDRFTLSGVISA 280
Query: 444 CSH 446
C++
Sbjct: 281 CAN 283
>gi|356515320|ref|XP_003526349.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Glycine max]
Length = 816
Score = 380 bits (975), Expect = e-102, Method: Compositional matrix adjust.
Identities = 206/625 (32%), Positives = 346/625 (55%), Gaps = 8/625 (1%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
M++ N + + + Y M V + F +L+ + G+ +H V+ G
Sbjct: 113 MLKGYAKNSTLRDAVRFYERMRCDEVMPVVYDFTYLLQLSGENLDLRRGREIHGMVITNG 172
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
FQ + F T ++++Y+KC + K+ + MP R +VSWN++++ +++ A+ V
Sbjct: 173 FQSNLFAMTAVVNLYAKCRQIEDAYKMFERMP--QRDLVSWNTVVAGYAQNGFARRAVQV 230
Query: 121 LKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
+ +M G + + T VSV+ + R G S+H ++ G + +A +++ Y
Sbjct: 231 VLQMQEAGQKPDSITLVSVLPAVADLKALRIGRSIHGYAFRAGF-EYMVNVATAMLDTYF 289
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K G V AR +F + ++VSW T+I GY G EAF +M V P V +
Sbjct: 290 KCGSVRSARLVFKGMSSRNVVSWNTMIDGYAQNGESEEAFATFLKMLDEGVEPTNVSMMG 349
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
+ CA +G+L +H LL + + + N L+SMY+KC +++A VF + K+
Sbjct: 350 ALHACANLGDLERGRYVHRLLDEKKIGFDVSVMNSLISMYSKCKRVDIAASVFGNLKHKT 409
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEE 356
V W +MI GYAQ G +EA+NLF + ++P+ TL + ++A A+L + K I
Sbjct: 410 VVTWNAMILGYAQNGCVNEALNLFCEMQSHDIKPDSFTLVSVITALADLSVTRQAKWIHG 469
Query: 357 YIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQ 416
+ ++ N V T+LI +KCG I A+++F+ + ++ + W+AMI+GY +G G +
Sbjct: 470 LAIRTLMDKNVFVCTALIDTHAKCGAIQTARKLFDLMQERHVITWNAMIDGYGTNGHGRE 529
Query: 417 ALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCL 476
AL+LF +MQ+ +KP+ + + S+++ACSHSG+V++G+ +F+SM+ N+G+EP+++HY +
Sbjct: 530 ALDLFNEMQN-GSVKPNEITFLSVIAACSHSGLVEEGMYYFESMKENYGLEPTMDHYGAM 588
Query: 477 VDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGST 536
VDLLGRAGR D A K I +MPV+ V +L AC H NVELGE A L L+P
Sbjct: 589 VDLLGRAGRLDDAWKFIQDMPVKPGITVLGAMLGACRIHKNVELGEKTADELFDLDPDDG 648
Query: 537 GNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSV 596
G ++L+AN++ SA MW + A R M+ + + K PG S VE+ V F +G +H S
Sbjct: 649 GYHVLLANMYASASMWDKVARVRTAMEKKGIQKTPGCSLVELRNEVHTFYSGSTNHPQSK 708
Query: 597 DIRKTLKELHIKLLEAGYIAEADIV 621
I L+ L ++ AGY+ + + +
Sbjct: 709 RIYAYLETLGDEMKAAGYVPDTNSI 733
Score = 142 bits (358), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 84/328 (25%), Positives = 166/328 (50%), Gaps = 4/328 (1%)
Query: 163 NEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQM 222
NE ++S++ KF + EA +F+ + V + T++ GY + +A +M
Sbjct: 74 NEHLFQTKLISLFCKFNSITEAARVFEPVEHKLDVLYHTMLKGYAKNSTLRDAVRFYERM 133
Query: 223 RRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDL 282
R V P + F L+ + +L +H +++ +G+ + +V++Y KC +
Sbjct: 134 RCDEVMPVVYDFTYLLQLSGENLDLRRGREIHGMVITNGFQSNLFAMTAVVNLYAKCRQI 193
Query: 283 ELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSAC 342
E A ++F+ + ++ + W +++ GYAQ G+ AV + ++ + +P+ TL + L A
Sbjct: 194 EDAYKMFERMPQRDLVSWNTVVAGYAQNGFARRAVQVVLQMQEAGQKPDSITLVSVLPAV 253
Query: 343 AELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWS 402
A+L +L G+ I Y G E V T+++ + KCG + A+ VF+ + +++ W+
Sbjct: 254 ADLKALRIGRSIHGYAFRAGFEYMVNVATAMLDTYFKCGSVRSARLVFKGMSSRNVVSWN 313
Query: 403 AMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSM-Q 461
MI+GYA +G ++A F KM EG++P V L AC++ G ++ G + + +
Sbjct: 314 TMIDGYAQNGESEEAFATFLKMLD-EGVEPTNVSMMGALHACANLGDLERGRYVHRLLDE 372
Query: 462 SNFGIEPSIEHYLCLVDLLGRAGRFDLA 489
G + S+ + L+ + + R D+A
Sbjct: 373 KKIGFDVSVMN--SLISMYSKCKRVDIA 398
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 106/190 (55%), Gaps = 1/190 (0%)
Query: 256 LLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSE 315
L++K+G+ NE L+S++ K + A RVF+ V K L+ +M+ GYA+ +
Sbjct: 66 LIIKNGFYNEHLFQTKLISLFCKFNSITEAARVFEPVEHKLDVLYHTMLKGYAKNSTLRD 125
Query: 316 AVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIH 375
AV ++R+ V P L E L +G+EI ++ NG +SN T++++
Sbjct: 126 AVRFYERMRCDEVMPVVYDFTYLLQLSGENLDLRRGREIHGMVITNGFQSNLFAMTAVVN 185
Query: 376 MFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAV 435
+++KC +I A ++FER+P +DL W+ ++ GYA +G +A+ + +MQ G KPD++
Sbjct: 186 LYAKCRQIEDAYKMFERMPQRDLVSWNTVVAGYAQNGFARRAVQVVLQMQEA-GQKPDSI 244
Query: 436 VYTSILSACS 445
S+L A +
Sbjct: 245 TLVSVLPAVA 254
Score = 46.2 bits (108), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 68/162 (41%), Gaps = 5/162 (3%)
Query: 336 ATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPD 395
A L C L L +I I+ NG + QT LI +F K I +A VFE V
Sbjct: 48 AILLELCTSLKEL---HQILPLIIKNGFYNEHLFQTKLISLFCKFNSITEAARVFEPVEH 104
Query: 396 KDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLS 455
K ++ M+ GYA + A+ FY+ + + P +T +L + + G
Sbjct: 105 KLDVLYHTMLKGYAKNSTLRDAVR-FYERMRCDEVMPVVYDFTYLLQLSGENLDLRRGRE 163
Query: 456 FFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMP 497
+ +N G + ++ +V+L + + + A K MP
Sbjct: 164 IHGMVITN-GFQSNLFAMTAVVNLYAKCRQIEDAYKMFERMP 204
>gi|297798412|ref|XP_002867090.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312926|gb|EFH43349.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 803
Score = 379 bits (974), Expect = e-102, Method: Compositional matrix adjust.
Identities = 208/602 (34%), Positives = 343/602 (56%), Gaps = 22/602 (3%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI+ T+ G + E L Y M+ +GV +SFT+P V+K+ I+S+ +GK++H+ V+K+
Sbjct: 97 MIKGFTSCGLYFEALQLYCRMVFSGVKADSFTYPFVIKSVTGISSLEEGKKIHAMVIKLR 156
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLND--EAI 118
F D +V LI +Y K + KV +EMP R +VSWNS+IS + L D ++
Sbjct: 157 FVSDVYVCNSLISLYMKLGCSWDAEKVFEEMPER--DIVSWNSMISGY--LALEDGFRSL 212
Query: 119 LVLKEMWVLGLELSASTFVSVVSGCSF----RQGISMHCCVYKLGLLNNEIPLANSVMSM 174
++ KEM G + + +S + CS G +HC + + ++ + S++ M
Sbjct: 213 MLFKEMLKFGFKPDRFSTMSALGACSHVYSPNMGKELHCHAVRSRIETGDVMVMTSILDM 272
Query: 175 YAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMS----VTPD 230
Y+K+G+V+ A IF I + +IV+W +IG Y V +AF LC Q +MS + PD
Sbjct: 273 YSKYGEVSYAERIFKCIIQRNIVAWNVLIGCYARNSRVTDAF-LCFQ--KMSEQNGLQPD 329
Query: 231 LVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFD 290
++ +NL+ CA + ++H ++ G+ LD L+ MY + G L+ A +FD
Sbjct: 330 VITLINLLPACA----ILEGRTIHGYAMRRGFLPHIVLDTALIDMYGEWGQLKSAEVIFD 385
Query: 291 AVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSK 350
+ EK++ W S+I Y Q G A+ LF++L +S+ P+ T+A+ L A AE SLS+
Sbjct: 386 RIAEKNLISWNSIIAAYVQNGKNYSALELFQKLWDSSLLPDSTTIASILPAYAESLSLSE 445
Query: 351 GKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAI 410
G++I YIV + SN + SL+HM++ CG + A++ F V KD+ W+++I YA+
Sbjct: 446 GRQIHAYIVKSRYGSNTIILNSLVHMYAMCGDLEDARKCFNHVLLKDVVSWNSIIMAYAV 505
Query: 411 HGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSI 470
HG G ++ LF +M + P+ + S+L+ACS SGMVD+G +F+SM+ +GI+P I
Sbjct: 506 HGFGRISVCLFSEMI-ASKVDPNKSTFASLLAACSISGMVDEGWEYFESMKREYGIDPGI 564
Query: 471 EHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLT 530
EHY ++DL+GR G F A + I EMP A++W LL+A H+++ + E+AA+ +
Sbjct: 565 EHYGYMLDLIGRTGNFSSAKRFIREMPFLPTARIWGSLLNASRNHNDITVAEFAAEQIFK 624
Query: 531 LNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDR 590
+ +TG Y+L+ N++ A W++ + LM+ + +++ S VE V GDR
Sbjct: 625 MEHDNTGCYVLLLNMYAEARRWEDVNRIKLLMESKGISRTSSRSTVEAKSKTHVLTNGDR 684
Query: 591 SH 592
SH
Sbjct: 685 SH 686
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 91/348 (26%), Positives = 168/348 (48%), Gaps = 9/348 (2%)
Query: 166 PLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRM 225
P + +A G + +A +FDE+ + W +I G+ + G EA L +M
Sbjct: 61 PALTRALRGFADSGLMEDALQLFDEMNKADTFVWNVMIKGFTSCGLYFEALQLYCRMVFS 120
Query: 226 SVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELA 285
V D + +I + +L +H++++K + ++ + N L+S+Y K G A
Sbjct: 121 GVKADSFTYPFVIKSVTGISSLEEGKKIHAMVIKLRFVSDVYVCNSLISLYMKLGCSWDA 180
Query: 286 RRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAEL 345
+VF+ + E+ + W SMI GY L ++ LFK +LK +P+ + + L AC+ +
Sbjct: 181 EKVFEEMPERDIVSWNSMISGYLALEDGFRSLMLFKEMLKFGFKPDRFSTMSALGACSHV 240
Query: 346 GSLSKGKEIEEYIVLNGLES-NRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAM 404
S + GKE+ + V + +E+ + V TS++ M+SK G ++ A+ +F+ + +++ W+ +
Sbjct: 241 YSPNMGKELHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFKCIIQRNIVAWNVL 300
Query: 405 INGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACS-HSGMVDDGLSFFKSMQSN 463
I YA + A F KM GL+PD + ++L AC+ G G + +
Sbjct: 301 IGCYARNSRVTDAFLCFQKMSEQNGLQPDVITLINLLPACAILEGRTIHGYAMRR----- 355
Query: 464 FGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSA 511
G P I L+D+ G G+ A + I + E W +++A
Sbjct: 356 -GFLPHIVLDTALIDMYGEWGQLKSA-EVIFDRIAEKNLISWNSIIAA 401
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 95/181 (52%), Gaps = 1/181 (0%)
Query: 266 DPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLK 325
DP + + G +E A ++FD + + F+W MI G+ G EA+ L+ R++
Sbjct: 60 DPALTRALRGFADSGLMEDALQLFDEMNKADTFVWNVMIKGFTSCGLYFEALQLYCRMVF 119
Query: 326 TSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINK 385
+ V+ + T + + + SL +GK+I ++ S+ V SLI ++ K G
Sbjct: 120 SGVKADSFTYPFVIKSVTGISSLEEGKKIHAMVIKLRFVSDVYVCNSLISLYMKLGCSWD 179
Query: 386 AKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACS 445
A++VFE +P++D+ W++MI+GY G ++L LF +M G KPD S L ACS
Sbjct: 180 AEKVFEEMPERDIVSWNSMISGYLALEDGFRSLMLFKEMLKF-GFKPDRFSTMSALGACS 238
Query: 446 H 446
H
Sbjct: 239 H 239
>gi|357453021|ref|XP_003596787.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355485835|gb|AES67038.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 867
Score = 379 bits (974), Expect = e-102, Method: Compositional matrix adjust.
Identities = 208/613 (33%), Positives = 345/613 (56%), Gaps = 14/613 (2%)
Query: 8 NGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFV 67
NG + + M GV N +T V+ A N + G +VH+ V+K GF++ V
Sbjct: 172 NGLYGYVWELFCQMQYEGVLPNRYTVSTVIAALVNEGVVGIGLQVHAMVVKHGFEEAIPV 231
Query: 68 QTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVL 127
LI +YS+ +R V D+M +R V+WNS+I+ + R + E + +M +
Sbjct: 232 FNSLISLYSRLGMLRDARDVFDKMEIR--DWVTWNSMIAGYVRNGQDLEVFEIFNKMQLA 289
Query: 128 GLELSASTFVSVVSGCSFRQGIS----MHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNE 183
G++ + TF SV+ C+ + ++ M C K G ++I + ++M +K ++++
Sbjct: 290 GVKPTHMTFASVIKSCASLRELALVKLMQCKALKSGFTTDQIVIT-ALMVALSKCKEMDD 348
Query: 184 ARSIFDEIGE-TSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCA 242
A S+F + E ++VSWT +I G + G ++A L +QMRR V P+ + ++
Sbjct: 349 ALSLFSLMEEGKNVVSWTAMISGCLQNGGNDQAVNLFSQMRREGVKPNHFTYSAIL---- 404
Query: 243 QVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTS 302
V MH+ ++K+ Y + L+ Y K G+ A +VF+ + K + W++
Sbjct: 405 TVHYPVFVSEMHAEVIKTNYERSSSVGTALLDAYVKLGNTIDAVKVFEIIEAKDLMAWSA 464
Query: 303 MIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAE-LGSLSKGKEIEEYIVLN 361
M+ GYAQ G EA LF +L+K ++PNE T ++ ++ACA + +GK+ Y +
Sbjct: 465 MLAGYAQTGETEEAAKLFHQLIKEGIKPNEFTFSSVINACASPTAAAEQGKQFHAYAIKM 524
Query: 362 GLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLF 421
L + V ++L+ M++K G I+ A EVF+R ++DL W++MI+GY+ HG +AL +F
Sbjct: 525 RLNNALCVSSALVTMYAKRGNIDSAHEVFKRQKERDLVSWNSMISGYSQHGQAKKALEVF 584
Query: 422 YKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLG 481
+MQ + DAV + +++AC+H+G+V+ G +F SM ++ I P+++HY C++DL
Sbjct: 585 DEMQK-RNMDVDAVTFIGVITACTHAGLVEKGQKYFNSMINDHHINPTMKHYSCMIDLYS 643
Query: 482 RAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYIL 541
RAG + A+ I+EMP A VW LL A H NVELGE AA+ L++L P + Y+L
Sbjct: 644 RAGMLEKAMGIINEMPFPPGATVWRTLLGAARVHRNVELGELAAEKLISLQPEDSAAYVL 703
Query: 542 MANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKT 601
++N++ +AG W+E R LMD R++ KEPG+S +E+ F+AGD +H LS I
Sbjct: 704 LSNMYAAAGNWQERTNVRKLMDKRKVKKEPGYSWIEVKNKTYSFLAGDLTHPLSNQIYSK 763
Query: 602 LKELHIKLLEAGY 614
L EL I+L +AGY
Sbjct: 764 LSELSIRLKDAGY 776
Score = 209 bits (532), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 164/591 (27%), Positives = 281/591 (47%), Gaps = 61/591 (10%)
Query: 12 EETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGL 71
+E L+ + S+L + + + T V CA G++VH +K G V T L
Sbjct: 75 KEALNLFVSLLHSSLQPDESTLSCVFNICAGSLDGKLGRQVHCQCVKFGLVDHVSVGTSL 134
Query: 72 IDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLEL 131
+DMY K + R+V DEM R+VVSW S+++ +S L + +M G+
Sbjct: 135 VDMYMKTENVNDGRRVFDEMGE--RNVVSWTSLLAGYSWNGLYGYVWELFCQMQYEGVLP 192
Query: 132 SASTFVSVVSGCSFRQ----GISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSI 187
+ T +V++ G+ +H V K G IP+ NS++S+Y++ G + +AR +
Sbjct: 193 NRYTVSTVIAALVNEGVVGIGLQVHAMVVKHG-FEEAIPVFNSLISLYSRLGMLRDARDV 251
Query: 188 FDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNL 247
FD++ V+W ++I GYV G E F + N+M+ V P + F ++I CA + L
Sbjct: 252 FDKMEIRDWVTWNSMIAGYVRNGQDLEVFEIFNKMQLAGVKPTHMTFASVIKSCASLREL 311
Query: 248 FLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLE-KSVFLWTSMIGG 306
L M LKSG+ + + L+ +KC +++ A +F + E K+V WT+MI G
Sbjct: 312 ALVKLMQCKALKSGFTTDQIVITALMVALSKCKEMDDALSLFSLMEEGKNVVSWTAMISG 371
Query: 307 YAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESN 366
Q G +AVNLF ++ + V+PN T + L+ + E+ ++ E +
Sbjct: 372 CLQNGGNDQAVNLFSQMRREGVKPNHFTYSAILTVHYPVFV----SEMHAEVIKTNYERS 427
Query: 367 RQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQH 426
V T+L+ + K G A +VFE + KDL WSAM+ GYA G ++A LF+++
Sbjct: 428 SSVGTALLDAYVKLGNTIDAVKVFEIIEAKDLMAWSAMLAGYAQTGETEEAAKLFHQLIK 487
Query: 427 VEGLKPDAVVYTSILSAC-SHSGMVDDGLSFFKSMQSNFGIEPSIEHYLC----LVDLLG 481
EG+KP+ ++S+++AC S + + G F + I+ + + LC LV +
Sbjct: 488 -EGIKPNEFTFSSVINACASPTAAAEQGKQFHA-----YAIKMRLNNALCVSSALVTMYA 541
Query: 482 RAGRFD-------------------------------LALKTIHEMP---VEVQAQVWAP 507
+ G D AL+ EM ++V A +
Sbjct: 542 KRGNIDSAHEVFKRQKERDLVSWNSMISGYSQHGQAKKALEVFDEMQKRNMDVDAVTFIG 601
Query: 508 LLSACMKHHNVELGEYAAKNLLT---LNPGSTGNYILMANLFTSAGMWKEA 555
+++AC VE G+ +++ +NP + +Y M +L++ AGM ++A
Sbjct: 602 VITACTHAGLVEKGQKYFNSMINDHHINP-TMKHYSCMIDLYSRAGMLEKA 651
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 109/364 (29%), Positives = 197/364 (54%), Gaps = 7/364 (1%)
Query: 84 SRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGC 143
+ + D++P R ++ N ++ ++SR EA+ + + L+ ST V + C
Sbjct: 44 AHNLFDKIPHRPTTLKEHNQLLFSYSRDKQTKEALNLFVSLLHSSLQPDESTLSCVFNIC 103
Query: 144 SF----RQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSW 199
+ + G +HC K GL+++ + + S++ MY K VN+ R +FDE+GE ++VSW
Sbjct: 104 AGSLDGKLGRQVHCQCVKFGLVDH-VSVGTSLVDMYMKTENVNDGRRVFDEMGERNVVSW 162
Query: 200 TTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLK 259
T+++ GY G + L QM+ V P+ +I G + + L +H++++K
Sbjct: 163 TSLLAGYSWNGLYGYVWELFCQMQYEGVLPNRYTVSTVIAALVNEGVVGIGLQVHAMVVK 222
Query: 260 SGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNL 319
G+ P+ N L+S+Y++ G L AR VFD + + W SMI GY + G E +
Sbjct: 223 HGFEEAIPVFNSLISLYSRLGMLRDARDVFDKMEIRDWVTWNSMIAGYVRNGQDLEVFEI 282
Query: 320 FKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSK 379
F ++ V+P T A+ + +CA L L+ K ++ + +G +++ V T+L+ SK
Sbjct: 283 FNKMQLAGVKPTHMTFASVIKSCASLRELALVKLMQCKALKSGFTTDQIVITALMVALSK 342
Query: 380 CGRINKAKEVFERVPD-KDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYT 438
C ++ A +F + + K++ W+AMI+G +G DQA+NLF +M+ EG+KP+ Y+
Sbjct: 343 CKEMDDALSLFSLMEEGKNVVSWTAMISGCLQNGGNDQAVNLFSQMRR-EGVKPNHFTYS 401
Query: 439 SILS 442
+IL+
Sbjct: 402 AILT 405
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 107/420 (25%), Positives = 195/420 (46%), Gaps = 17/420 (4%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI NG E ++ M GV TF V+K+CA++ + K + LK G
Sbjct: 266 MIAGYVRNGQDLEVFEIFNKMQLAGVKPTHMTFASVIKSCASLRELALVKLMQCKALKSG 325
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F D V T L+ SKC + + + M ++VVSW ++IS + ND+A+ +
Sbjct: 326 FTTDQIVITALMVALSKCKEMDDALSLFSLME-EGKNVVSWTAMISGCLQNGGNDQAVNL 384
Query: 121 LKEMWVLGLELSASTFVSVVSGCSFRQGIS-MHCCVYKLGLLNNEIPLANSVMSMYAKFG 179
+M G++ + T+ ++++ + +S MH V K + + +++ Y K G
Sbjct: 385 FSQMRREGVKPNHFTYSAILT-VHYPVFVSEMHAEVIKTNYERSS-SVGTALLDAYVKLG 442
Query: 180 KVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLIL 239
+A +F+ I +++W+ ++ GY G EA L +Q+ + + P+ F ++I
Sbjct: 443 NTIDAVKVFEIIEAKDLMAWSAMLAGYAQTGETEEAAKLFHQLIKEGIKPNEFTFSSVIN 502
Query: 240 GC------AQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVL 293
C A+ G F H+ +K NN + + LV+MY K G+++ A VF
Sbjct: 503 ACASPTAAAEQGKQF-----HAYAIKMRLNNALCVSSALVTMYAKRGNIDSAHEVFKRQK 557
Query: 294 EKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKG-K 352
E+ + W SMI GY+Q G +A+ +F + K ++ + T ++AC G + KG K
Sbjct: 558 ERDLVSWNSMISGYSQHGQAKKALEVFDEMQKRNMDVDAVTFIGVITACTHAGLVEKGQK 617
Query: 353 EIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVP-DKDLAVWSAMINGYAIH 411
I + + + + +I ++S+ G + KA + +P VW ++ +H
Sbjct: 618 YFNSMINDHHINPTMKHYSCMIDLYSRAGMLEKAMGIINEMPFPPGATVWRTLLGAARVH 677
>gi|297740904|emb|CBI31086.3| unnamed protein product [Vitis vinifera]
Length = 766
Score = 379 bits (974), Expect = e-102, Method: Compositional matrix adjust.
Identities = 219/623 (35%), Positives = 343/623 (55%), Gaps = 10/623 (1%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MIR T G F+ L Y ML G + +TFP V+KAC +NS+ G+ VH + +G
Sbjct: 118 MIRGFTMMGQFDFALLFYFKMLGCGTLPDKYTFPYVIKACGGLNSVALGRVVHDKIQFMG 177
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F+ D FV + LI YS+ +R + D MP + V WN +++ + + D A V
Sbjct: 178 FELDVFVGSSLIKFYSENGCIHDARYLFDRMPSK--DGVLWNVMLNGYVKNGDWDNATGV 235
Query: 121 LKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANS--VMSM 174
EM ++ TF V+S C+ G +H V GL + P+AN+ ++ +
Sbjct: 236 FMEMRRTETNPNSVTFACVLSVCASEIMINFGSQLHGLVVSSGL-EMDSPVANTFALIDI 294
Query: 175 YAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVF 234
Y K V AR IFD+ IV T +I GYV G N A + + + + + V
Sbjct: 295 YFKCRDVEMARKIFDQRTPVDIVVCTAMISGYVLNGMNNNALEIFRWLLQERMRANSVTL 354
Query: 235 LNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLE 294
+++ CA + L L +H +LK+G+ + + ++ MY KCG L+LA + F + +
Sbjct: 355 ASVLPACAGLAALTLGKELHGHILKNGHGGSCYVGSAIMDMYAKCGRLDLAHQTFIGISD 414
Query: 295 KSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEI 354
K W SMI +Q G P EA++LF+++ + + +++ LSACA L +L GKEI
Sbjct: 415 KDAVCWNSMITSCSQNGKPEEAIDLFRQMGMAGTKYDCVSISAALSACANLPALHYGKEI 474
Query: 355 EEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMG 414
+++ S+ +++LI M+SKCG ++ A VF+ + +K+ W+++I Y HG
Sbjct: 475 HAFMMRGAFRSDLFAESALIDMYSKCGNLDLACRVFDTMEEKNEVSWNSIIAAYGNHGRL 534
Query: 415 DQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYL 474
+LNLF+ M +G++PD V + +I+SAC H+G VD+G+ +F+ M GI +EHY
Sbjct: 535 KDSLNLFHGMLG-DGIQPDHVTFLAIISACGHAGQVDEGIHYFRCMTEELGIMARMEHYA 593
Query: 475 CLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPG 534
C+VDL GRAGR + A I+ MP A VW LL AC H NVEL E A++NL L+P
Sbjct: 594 CMVDLFGRAGRLNEAFGMINSMPFSPDAGVWGTLLGACRLHGNVELAEVASRNLFDLDPQ 653
Query: 535 STGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHL 594
++G Y+L++N+ +AG W+ R LM +R + K PG S ++++ + +FVA DRSH
Sbjct: 654 NSGYYVLLSNVHANAGQWESVLKIRSLMKERGVQKVPGCSWIDVNNTTHMFVAADRSHPQ 713
Query: 595 SVDIRKTLKELHIKLLEAGYIAE 617
S I LK L ++L + GY+ +
Sbjct: 714 SSQIYLLLKNLFLELRKEGYVPQ 736
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 101/393 (25%), Positives = 184/393 (46%), Gaps = 10/393 (2%)
Query: 133 ASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIF 188
A VS++ C+ QG H + G+ N I L ++ MY G +A++IF
Sbjct: 46 APQLVSILQTCTDPSGLSQGRQAHAQMLVNGIGYNGI-LGTKLLGMYVLCGAFLDAKNIF 104
Query: 189 DEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLF 248
++ W +I G+ +G + A +M PD F +I C + ++
Sbjct: 105 YQLRLWCSEPWNWMIRGFTMMGQFDFALLFYFKMLGCGTLPDKYTFPYVIKACGGLNSVA 164
Query: 249 LALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYA 308
L +H + G+ + + + L+ Y++ G + AR +FD + K LW M+ GY
Sbjct: 165 LGRVVHDKIQFMGFELDVFVGSSLIKFYSENGCIHDARYLFDRMPSKDGVLWNVMLNGYV 224
Query: 309 QLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQ 368
+ G A +F + +T PN T A LS CA ++ G ++ +V +GLE +
Sbjct: 225 KNGDWDNATGVFMEMRRTETNPNSVTFACVLSVCASEIMINFGSQLHGLVVSSGLEMDSP 284
Query: 369 VQTS--LIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQH 426
V + LI ++ KC + A+++F++ D+ V +AMI+GY ++GM + AL +F +
Sbjct: 285 VANTFALIDIYFKCRDVEMARKIFDQRTPVDIVVCTAMISGYVLNGMNNNALEIFRWLLQ 344
Query: 427 VEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRF 486
E ++ ++V S+L AC+ + G + N G S ++D+ + GR
Sbjct: 345 -ERMRANSVTLASVLPACAGLAALTLGKELHGHILKN-GHGGSCYVGSAIMDMYAKCGRL 402
Query: 487 DLALKTIHEMPVEVQAQVWAPLLSACMKHHNVE 519
DLA +T + + A W ++++C ++ E
Sbjct: 403 DLAHQTFIGIS-DKDAVCWNSMITSCSQNGKPE 434
>gi|242087005|ref|XP_002439335.1| hypothetical protein SORBIDRAFT_09g004560 [Sorghum bicolor]
gi|241944620|gb|EES17765.1| hypothetical protein SORBIDRAFT_09g004560 [Sorghum bicolor]
Length = 886
Score = 379 bits (974), Expect = e-102, Method: Compositional matrix adjust.
Identities = 220/683 (32%), Positives = 350/683 (51%), Gaps = 64/683 (9%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
++R G + + ML+ G + FT P LKAC + S G H + G
Sbjct: 120 LVRAHIEEGRLDRAIGVSCRMLRAGTKPDHFTLPYALKACGELPSYRSGSAFHGLICCNG 179
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVR-LRSVVSWNSIISAHSRACLNDEAIL 119
F+ + FV L+ MYS+ + V DE+ + + V+SWNSI++AH + A+
Sbjct: 180 FESNVFVCNALVAMYSRSGSLEDASLVFDEITRKGIDDVISWNSIVAAHVKGSNPRTALD 239
Query: 120 VLKEMWVLGLELSAS------TFVSVVSGCSFRQGISMHCCVYKLGLLNNEIP---LANS 170
+ EM + E + + + V+++ C+ + + ++ + N + N+
Sbjct: 240 LFSEMTTIVHEKATNERSDIISIVNILPACASLKALPQTKEIHSYAIRNGTFADAFVCNA 299
Query: 171 VMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVT-- 228
++ YAK G + +A ++F+ + +VSW ++ GY G AF L MR+ ++
Sbjct: 300 LIDTYAKCGSMKDAVNVFNVMEFKDVVSWNAMVTGYTQSGKFGAAFELFKNMRKENIPLD 359
Query: 229 ---------------------------------PDLVVFLNLILGCAQVGNLFLALSMHS 255
P+ V ++L+ CA +G L + H+
Sbjct: 360 VITWSAVIAGYAQRGYGQEALDTFQQMILYGSEPNSVTIISLLSACASLGALSQGMETHA 419
Query: 256 LLLKS------------GYNNEDPLDNLLVSMYTKCGDLELARRVFDAV--LEKSVFLWT 301
LK G + + N L+ MY+KC + AR +F+++ E++V WT
Sbjct: 420 YSLKKCLLSLDNDFGGDGDGEDLVVHNALIDMYSKCRSFKAARTIFNSIPRRERNVVTWT 479
Query: 302 SMIGGYAQLGYPSEAVNLFKRLLKT--SVRPNEATLATTLSACAELGSLSKGKEIEEYIV 359
MIGGYAQ G ++A+ LF ++ +V PN T++ L ACA L SL GK+I Y+
Sbjct: 480 VMIGGYAQYGDSNDALKLFSEMISKPYAVAPNAYTISCILMACAHLSSLRMGKQIHAYVT 539
Query: 360 LNG-LESNRQ-VQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQA 417
+ ES+ V LI M+SKCG ++ A+ VF+ +P ++ W++M++GY +HG G +A
Sbjct: 540 RHHEYESSVYFVANCLIDMYSKCGDVDTARNVFDSMPKRNEVSWTSMMSGYGMHGRGKEA 599
Query: 418 LNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLV 477
L++F KMQ G PD + + +L ACSHSGMVD GL +F M+S++G+ S +HY C++
Sbjct: 600 LDIFDKMQKA-GFVPDDISFLVLLYACSHSGMVDQGLDYFDIMRSDYGVIASAQHYACVI 658
Query: 478 DLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTG 537
DLL R+GR D A KTI EMP+E A +W LLSAC H NVEL EYA L+++ + G
Sbjct: 659 DLLARSGRLDKAWKTIQEMPMEPSAAIWVALLSACRVHSNVELAEYALNKLVSMKAENDG 718
Query: 538 NYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVD 597
+Y L++N++ +A WK+ A R LM + K PG S V+ F GDRSH LS +
Sbjct: 719 SYTLISNIYATARRWKDVARIRQLMKKSGIKKRPGCSWVQGKKGTASFFVGDRSHPLSPE 778
Query: 598 IRKTLKELHIKLLEAGYIAEADI 620
I L+ L ++ GY+ E +
Sbjct: 779 IYSLLERLIGRIKVMGYVPETNF 801
Score = 175 bits (443), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 145/576 (25%), Positives = 246/576 (42%), Gaps = 91/576 (15%)
Query: 24 TGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGF---------------QQDAFVQ 68
TG + F +LK C ++N++ +++H ++ G ++V
Sbjct: 25 TGRDVSPTHFASLLKECRSVNTV---RQIHQKIIAYGLLSYPASLLSVSLPPLPSHSYVS 81
Query: 69 -----TGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKE 123
TG++ Y C + VL+ V V WN ++ AH D AI V
Sbjct: 82 PKSLGTGVVASYLACGATSDALSVLER--VVPSPAVWWNLLVRAHIEEGRLDRAIGVSCR 139
Query: 124 MWVLGLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFG 179
M G + T + C S+R G + H + G +N + + N++++MY++ G
Sbjct: 140 MLRAGTKPDHFTLPYALKACGELPSYRSGSAFHGLICCNGFESN-VFVCNALVAMYSRSG 198
Query: 180 KVNEARSIFDEI---GETSIVSWTTIIGGYVNVGNVNEAFGLCNQM------RRMSVTPD 230
+ +A +FDEI G ++SW +I+ +V N A L ++M + + D
Sbjct: 199 SLEDASLVFDEITRKGIDDVISWNSIVAAHVKGSNPRTALDLFSEMTTIVHEKATNERSD 258
Query: 231 LVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFD 290
++ +N++ CA + L +HS +++G + + N L+ Y KCG ++ A VF+
Sbjct: 259 IISIVNILPACASLKALPQTKEIHSYAIRNGTFADAFVCNALIDTYAKCGSMKDAVNVFN 318
Query: 291 AVLEKSVFLWTSM-----------------------------------IGGYAQLGYPSE 315
+ K V W +M I GYAQ GY E
Sbjct: 319 VMEFKDVVSWNAMVTGYTQSGKFGAAFELFKNMRKENIPLDVITWSAVIAGYAQRGYGQE 378
Query: 316 AVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQ------- 368
A++ F++++ PN T+ + LSACA LG+LS+G E Y + L S
Sbjct: 379 ALDTFQQMILYGSEPNSVTIISLLSACASLGALSQGMETHAYSLKKCLLSLDNDFGGDGD 438
Query: 369 -----VQTSLIHMFSKCGRINKAKEVFERVP--DKDLAVWSAMINGYAIHGMGDQALNLF 421
V +LI M+SKC A+ +F +P ++++ W+ MI GYA +G + AL LF
Sbjct: 439 GEDLVVHNALIDMYSKCRSFKAARTIFNSIPRRERNVVTWTVMIGGYAQYGDSNDALKLF 498
Query: 422 YKM-QHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYL-CLVDL 479
+M + P+A + IL AC+H + G + + E S+ CL+D+
Sbjct: 499 SEMISKPYAVAPNAYTISCILMACAHLSSLRMGKQIHAYVTRHHEYESSVYFVANCLIDM 558
Query: 480 LGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKH 515
+ G D A MP + W ++S H
Sbjct: 559 YSKCGDVDTARNVFDSMPKRNEVS-WTSMMSGYGMH 593
>gi|108708629|gb|ABF96424.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
gi|125586550|gb|EAZ27214.1| hypothetical protein OsJ_11153 [Oryza sativa Japonica Group]
Length = 748
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 202/602 (33%), Positives = 341/602 (56%), Gaps = 16/602 (2%)
Query: 29 NSFTFPLVLKACANINSIWDGKRVHSHVLKVGF-QQDAFVQTGLIDMYSKCSDFVSSRKV 87
++FTFP +L+A + ++H+ L++G + DAF L+ Y + + +
Sbjct: 70 DAFTFPPLLRAAQGPGT---AAQLHACALRLGLLRGDAFASGALVHAYLRFGRVRDAYRA 126
Query: 88 LDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCSF-- 145
DEM R R V +WN+++S R EA+ + M + G+ A T SV+ C
Sbjct: 127 FDEM--RHRDVPAWNAMLSGLCRNARAAEAVGLFGRMVMEGVAGDAVTVSSVLPMCVLLG 184
Query: 146 --RQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTII 203
++MH K GL ++E+ + N+++ +Y K G + E R +FD + +V+W +II
Sbjct: 185 DRALALAMHLYAVKHGL-DDELFVCNAMIDVYGKLGMLEEVRKVFDGMSSRDLVTWNSII 243
Query: 204 GGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYN 263
G+ G V A + MR V+PD++ L+L AQ G++ S+H +++ G++
Sbjct: 244 SGHEQGGQVASAVEMFCGMRDSGVSPDVLTLLSLASAIAQCGDICGGRSVHCYMVRRGWD 303
Query: 264 NEDPL-DNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKR 322
D + N +V MY K +E A+R+FD++ + W ++I GY Q G SEA++++
Sbjct: 304 VGDIIAGNAIVDMYAKLSKIEAAQRMFDSMPVRDAVSWNTLITGYMQNGLASEAIHVYDH 363
Query: 323 LLK-TSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCG 381
+ K ++P + T + L A + LG+L +G + + GL + V T +I +++KCG
Sbjct: 364 MQKHEGLKPIQGTFVSVLPAYSHLGALQQGTRMHALSIKTGLNLDVYVGTCVIDLYAKCG 423
Query: 382 RINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSIL 441
++++A +FE+ P + W+A+I+G +HG G +AL+LF +MQ EG+ PD V + S+L
Sbjct: 424 KLDEAMLLFEQTPRRSTGPWNAVISGVGVHGHGAKALSLFSQMQQ-EGISPDHVTFVSLL 482
Query: 442 SACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQ 501
+ACSH+G+VD G +FF MQ+ +GI+P +HY C+VD+ GRAG+ D A I MP++
Sbjct: 483 AACSHAGLVDQGRNFFNMMQTAYGIKPIAKHYACMVDMFGRAGQLDDAFDFIRNMPIKPD 542
Query: 502 AQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGL 561
+ +W LL AC H NVE+G+ A++NL L+P + G Y+LM+N++ G W R L
Sbjct: 543 SAIWGALLGACRIHGNVEMGKVASQNLFELDPKNVGYYVLMSNMYAKVGKWDGVDEVRSL 602
Query: 562 MDDRRLTKEPGWSQVEIDGSVQVFVAGDRS--HHLSVDIRKTLKELHIKLLEAGYIAEAD 619
+ + L K PGWS +E+ SV VF +G++ H +I++ L +L K+ GY+ +
Sbjct: 603 VRRQNLQKTPGWSSIEVKRSVNVFYSGNQMNIHPQHEEIQRELLDLLAKIRSLGYVPDYS 662
Query: 620 IV 621
V
Sbjct: 663 FV 664
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 115/405 (28%), Positives = 203/405 (50%), Gaps = 13/405 (3%)
Query: 102 NSIISAHSRAC----LNDEAILVLKEMWVLGLELSASTFVSVVSGCSFRQG----ISMHC 153
N++ISA SRA +L +L L A TF ++ QG +H
Sbjct: 36 NTLISAFSRASLPRLALPLLRHLLLSSPLLPLRPDAFTFPPLLRAA---QGPGTAAQLHA 92
Query: 154 CVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVN 213
C +LGLL + + +++ Y +FG+V +A FDE+ + +W ++ G
Sbjct: 93 CALRLGLLRGDAFASGALVHAYLRFGRVRDAYRAFDEMRHRDVPAWNAMLSGLCRNARAA 152
Query: 214 EAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLV 273
EA GL +M V D V +++ C +G+ LAL+MH +K G ++E + N ++
Sbjct: 153 EAVGLFGRMVMEGVAGDAVTVSSVLPMCVLLGDRALALAMHLYAVKHGLDDELFVCNAMI 212
Query: 274 SMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEA 333
+Y K G LE R+VFD + + + W S+I G+ Q G + AV +F + + V P+
Sbjct: 213 DVYGKLGMLEEVRKVFDGMSSRDLVTWNSIISGHEQGGQVASAVEMFCGMRDSGVSPDVL 272
Query: 334 TLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQ-TSLIHMFSKCGRINKAKEVFER 392
TL + SA A+ G + G+ + Y+V G + + +++ M++K +I A+ +F+
Sbjct: 273 TLLSLASAIAQCGDICGGRSVHCYMVRRGWDVGDIIAGNAIVDMYAKLSKIEAAQRMFDS 332
Query: 393 VPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDD 452
+P +D W+ +I GY +G+ +A++++ MQ EGLKP + S+L A SH G +
Sbjct: 333 MPVRDAVSWNTLITGYMQNGLASEAIHVYDHMQKHEGLKPIQGTFVSVLPAYSHLGALQQ 392
Query: 453 GLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMP 497
G + ++ G+ + C++DL + G+ D A+ + P
Sbjct: 393 G-TRMHALSIKTGLNLDVYVGTCVIDLYAKCGKLDEAMLLFEQTP 436
Score = 178 bits (452), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 123/453 (27%), Positives = 217/453 (47%), Gaps = 20/453 (4%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
M+ N E + + M+ GV G++ T VL C + +H + +K G
Sbjct: 141 MLSGLCRNARAAEAVGLFGRMVMEGVAGDAVTVSSVLPMCVLLGDRALALAMHLYAVKHG 200
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+ FV +ID+Y K RKV D M R +V+WNSIIS H + A+ +
Sbjct: 201 LDDELFVCNAMIDVYGKLGMLEEVRKVFDGMSS--RDLVTWNSIISGHEQGGQVASAVEM 258
Query: 121 LKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
M G+ T +S+ S + G S+HC + + G +I N+++ MYA
Sbjct: 259 FCGMRDSGVSPDVLTLLSLASAIAQCGDICGGRSVHCYMVRRGWDVGDIIAGNAIVDMYA 318
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRM-SVTPDLVVFL 235
K K+ A+ +FD + VSW T+I GY+ G +EA + + M++ + P F+
Sbjct: 319 KLSKIEAAQRMFDSMPVRDAVSWNTLITGYMQNGLASEAIHVYDHMQKHEGLKPIQGTFV 378
Query: 236 NLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEK 295
+++ + +G L MH+L +K+G N + + ++ +Y KCG L+ A +F+ +
Sbjct: 379 SVLPAYSHLGALQQGTRMHALSIKTGLNLDVYVGTCVIDLYAKCGKLDEAMLLFEQTPRR 438
Query: 296 SVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIE 355
S W ++I G G+ ++A++LF ++ + + P+ T + L+AC+ G + +G+
Sbjct: 439 STGPWNAVISGVGVHGHGAKALSLFSQMQQEGISPDHVTFVSLLAACSHAGLVDQGRNFF 498
Query: 356 EYI-VLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDK-DLAVWSAMINGYAIHG- 412
+ G++ + ++ MF + G+++ A + +P K D A+W A++ IHG
Sbjct: 499 NMMQTAYGIKPIAKHYACMVDMFGRAGQLDDAFDFIRNMPIKPDSAIWGALLGACRIHGN 558
Query: 413 --MGDQA-LNLFYKMQHVEGLKPDAVVYTSILS 442
MG A NLF L P V Y ++S
Sbjct: 559 VEMGKVASQNLFE-------LDPKNVGYYVLMS 584
>gi|359488559|ref|XP_002275581.2| PREDICTED: pentatricopeptide repeat-containing protein At3g26782,
mitochondrial-like [Vitis vinifera]
Length = 735
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 206/577 (35%), Positives = 328/577 (56%), Gaps = 23/577 (3%)
Query: 62 QQDAFVQTGLIDMYSKCSDFVSSRK--------VLDEMPVRLRSVVSWNSIISAHSRACL 113
+ AF +G S C+ V R+ L V +V SWNS+I+ +R+
Sbjct: 73 EHTAFQFSGFSKRRSICAGAVLRRRYSNNPNLTTLFNKYVDKTNVFSWNSVIAELARSGD 132
Query: 114 NDEAILVLKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLAN 169
+ EA+ M L L+ + STF + CS G H G ++ +++
Sbjct: 133 SVEALRAFSSMRKLSLKPNRSTFPCAIKSCSALLDLHSGRQAHQQALIFGF-EPDLFVSS 191
Query: 170 SVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQM------- 222
+++ MY+K G++ +AR++FDEI +IVSWT++I GYV + + A L +
Sbjct: 192 ALVDMYSKCGELRDARTLFDEISHRNIVSWTSMITGYVQNDDAHRALLLFKEFLVEESGS 251
Query: 223 -RRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGD 281
V D + ++++ C++V + +H L+K G+ + ++N L+ Y KCG+
Sbjct: 252 EGDGEVCVDPIAMVSVLSACSRVSEKSITEGVHGFLIKRGFEGDLGVENTLMDAYAKCGE 311
Query: 282 LELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKT-SVRPNEATLATTLS 340
L ++RRVFD + E+ V W S+I YAQ G +E++ +F R++K + N TL+ L
Sbjct: 312 LGVSRRVFDGMAERDVISWNSIIAVYAQNGMSTESMEIFHRMVKDGEINYNAVTLSAVLL 371
Query: 341 ACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAV 400
ACA GS GK I + ++ GLESN V TS+I M+ KCG++ A++ F+R+ +K++
Sbjct: 372 ACAHSGSQRLGKCIHDQVIKMGLESNVFVGTSIIDMYCKCGKVEMARKAFDRMREKNVKS 431
Query: 401 WSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSM 460
WSAM+ GY +HG +AL +FY+M + G+KP+ + + S+L+ACSH+G++++G +FK+M
Sbjct: 432 WSAMVAGYGMHGHAKEALEVFYEMN-MAGVKPNYITFVSVLAACSHAGLLEEGWHWFKAM 490
Query: 461 QSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVEL 520
F +EP +EHY C+VDLLGRAG A I M + VW LL AC H NV+L
Sbjct: 491 SHEFDVEPGVEHYGCMVDLLGRAGYLKEAFDLIKGMKLRPDFVVWGALLGACRMHKNVDL 550
Query: 521 GEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDG 580
GE +A+ L L+P + G Y+L++N++ AG W++ R LM + L K PG+S V+I G
Sbjct: 551 GEISARKLFELDPKNCGYYVLLSNIYADAGRWEDVERMRILMKNSGLVKPPGFSLVDIKG 610
Query: 581 SVQVFVAGDRSHHLSVDIRKTLKELHIKLLEAGYIAE 617
V VF+ GDR H I + L++L +KL E GY+ +
Sbjct: 611 RVHVFLVGDREHPQHEKIYEYLEKLSMKLQEVGYVPD 647
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 143/507 (28%), Positives = 239/507 (47%), Gaps = 66/507 (13%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+I +G E L +SSM + + N TFP +K+C+ + + G++ H L G
Sbjct: 123 VIAELARSGDSVEALRAFSSMRKLSLKPNRSTFPCAIKSCSALLDLHSGRQAHQQALIFG 182
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F+ D FV + L+DMYSKC + +R + DE + R++VSW S+I+ + + A+L+
Sbjct: 183 FEPDLFVSSALVDMYSKCGELRDARTLFDE--ISHRNIVSWTSMITGYVQNDDAHRALLL 240
Query: 121 LKEMWVLGLELSAS-----------TFVSVVSGCSFRQGISM----HCCVYKLGLLNNEI 165
KE V E S S VSV+S CS S+ H + K G ++
Sbjct: 241 FKEFLV---EESGSEGDGEVCVDPIAMVSVLSACSRVSEKSITEGVHGFLIKRG-FEGDL 296
Query: 166 PLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQM-RR 224
+ N++M YAK G++ +R +FD + E ++SW +II Y G E+ + ++M +
Sbjct: 297 GVENTLMDAYAKCGELGVSRRVFDGMAERDVISWNSIIAVYAQNGMSTESMEIFHRMVKD 356
Query: 225 MSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLEL 284
+ + V ++L CA G+ L +H ++K G + + ++ MY KCG +E+
Sbjct: 357 GEINYNAVTLSAVLLACAHSGSQRLGKCIHDQVIKMGLESNVFVGTSIIDMYCKCGKVEM 416
Query: 285 ARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAE 344
AR+ FD + EK+V W++M+ GY G+ EA+ +F + V+PN T + L+AC+
Sbjct: 417 ARKAFDRMREKNVKSWSAMVAGYGMHGHAKEALEVFYEMNMAGVKPNYITFVSVLAACSH 476
Query: 345 LGSLSKGKEIEEYIVLNGLESNRQVQTSLIH---MFSKCGRINKAKEVFERVPDKDLAVW 401
G L +G + + V+ + H M GR KE F+
Sbjct: 477 AGLLEEG-----WHWFKAMSHEFDVEPGVEHYGCMVDLLGRAGYLKEAFD---------- 521
Query: 402 SAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQ 461
I GM L+PD VV+ ++L AC VD G S +
Sbjct: 522 -------LIKGM---------------KLRPDFVVWGALLGACRMHKNVDLGEI---SAR 556
Query: 462 SNFGIEP-SIEHYLCLVDLLGRAGRFD 487
F ++P + +Y+ L ++ AGR++
Sbjct: 557 KLFELDPKNCGYYVLLSNIYADAGRWE 583
>gi|356522365|ref|XP_003529817.1| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
chloroplastic-like [Glycine max]
Length = 882
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 207/609 (33%), Positives = 334/609 (54%), Gaps = 10/609 (1%)
Query: 9 GSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQ 68
G F+E L Y ML GV + +TFP VL+ C + ++ G+ +H HV++ GF+ D V
Sbjct: 186 GLFDEALDLYHRMLWVGVKPDVYTFPCVLRTCGGMPNLVRGREIHVHVIRYGFESDVDVV 245
Query: 69 TGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLG 128
LI MY KC D ++R V D+MP R R +SWN++IS + + E + + M
Sbjct: 246 NALITMYVKCGDVNTARLVFDKMPNRDR--ISWNAMISGYFENGVCLEGLRLFGMMIKYP 303
Query: 129 LELSASTFVSVVSGCSF----RQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEA 184
++ T SV++ C R G +H V + + + NS++ MY+ G + EA
Sbjct: 304 VDPDLMTMTSVITACELLGDDRLGRQIHGYVLRTEF-GRDPSIHNSLIPMYSSVGLIEEA 362
Query: 185 RSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQV 244
++F +VSWT +I GY N +A M + PD + ++ C+ +
Sbjct: 363 ETVFSRTECRDLVSWTAMISGYENCLMPQKALETYKMMEAEGIMPDEITIAIVLSACSCL 422
Query: 245 GNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMI 304
NL + +++H + + G + + N L+ MY KC ++ A +F + LEK++ WTS+I
Sbjct: 423 CNLDMGMNLHEVAKQKGLVSYSIVANSLIDMYAKCKCIDKALEIFHSTLEKNIVSWTSII 482
Query: 305 GGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLE 364
G EA+ F+ +++ ++PN TL LSACA +G+L+ GKEI + + G+
Sbjct: 483 LGLRINNRCFEALFFFREMIR-RLKPNSVTLVCVLSACARIGALTCGKEIHAHALRTGVS 541
Query: 365 SNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKM 424
+ + +++ M+ +CGR+ A + F V D ++ W+ ++ GYA G G A LF +M
Sbjct: 542 FDGFMPNAILDMYVRCGRMEYAWKQFFSV-DHEVTSWNILLTGYAERGKGAHATELFQRM 600
Query: 425 QHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAG 484
+ P+ V + SIL ACS SGMV +GL +F SM+ + I P+++HY C+VDLLGR+G
Sbjct: 601 VE-SNVSPNEVTFISILCACSRSGMVAEGLEYFNSMKYKYSIMPNLKHYACVVDLLGRSG 659
Query: 485 RFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMAN 544
+ + A + I +MP++ VW LL++C HH+VELGE AA+N+ + S G YIL++N
Sbjct: 660 KLEEAYEFIQKMPMKPDPAVWGALLNSCRIHHHVELGELAAENIFQDDTTSVGYYILLSN 719
Query: 545 LFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKE 604
L+ G W + A R +M L +PG S VE+ G+V F++ D H +I L+
Sbjct: 720 LYADNGKWDKVAEVRKMMRQNGLIVDPGCSWVEVKGTVHAFLSSDNFHPQIKEINALLER 779
Query: 605 LHIKLLEAG 613
+ K+ EAG
Sbjct: 780 FYKKMKEAG 788
Score = 208 bits (530), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 142/511 (27%), Positives = 249/511 (48%), Gaps = 20/511 (3%)
Query: 9 GSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQ 68
G+ + +S SM + + + +++ C + +G RV+S+V +
Sbjct: 85 GNLDRAMSYLDSMHELRIPVEDDAYVALIRLCEWKRARKEGSRVYSYVSISMSHLSLQLG 144
Query: 69 TGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLG 128
L+ M+ + + V + V M R++ SWN ++ +++A L DEA+ + M +G
Sbjct: 145 NALLSMFVRFGNLVDAWYVFGRM--EKRNLFSWNVLVGGYAKAGLFDEALDLYHRMLWVG 202
Query: 129 LELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEA 184
++ TF V+ C + +G +H V + G +++ + N++++MY K G VN A
Sbjct: 203 VKPDVYTFPCVLRTCGGMPNLVRGREIHVHVIRYG-FESDVDVVNALITMYVKCGDVNTA 261
Query: 185 RSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQV 244
R +FD++ +SW +I GY G E L M + V PDL+ ++I C +
Sbjct: 262 RLVFDKMPNRDRISWNAMISGYFENGVCLEGLRLFGMMIKYPVDPDLMTMTSVITACELL 321
Query: 245 GNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMI 304
G+ L +H +L++ + + + N L+ MY+ G +E A VF + + WT+MI
Sbjct: 322 GDDRLGRQIHGYVLRTEFGRDPSIHNSLIPMYSSVGLIEEAETVFSRTECRDLVSWTAMI 381
Query: 305 GGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLE 364
GY P +A+ +K + + P+E T+A LSAC+ L +L G + E GL
Sbjct: 382 SGYENCLMPQKALETYKMMEAEGIMPDEITIAIVLSACSCLCNLDMGMNLHEVAKQKGLV 441
Query: 365 SNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKM 424
S V SLI M++KC I+KA E+F +K++ W+++I G I+ +AL F +M
Sbjct: 442 SYSIVANSLIDMYAKCKCIDKALEIFHSTLEKNIVSWTSIILGLRINNRCFEALFFFREM 501
Query: 425 QHVEGLKPDAVVYTSILSACSHSGMVDDGLSF----FKSMQSNFGIEPSIEHYLCLVDLL 480
+ LKP++V +LSAC+ G + G ++ S G P+ ++D+
Sbjct: 502 --IRRLKPNSVTLVCVLSACARIGALTCGKEIHAHALRTGVSFDGFMPN-----AILDMY 554
Query: 481 GRAGRFDLALKTIHEMPVEVQAQVWAPLLSA 511
R GR + A K + EV + W LL+
Sbjct: 555 VRCGRMEYAWKQFFSVDHEVTS--WNILLTG 583
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 122/422 (28%), Positives = 210/422 (49%), Gaps = 21/422 (4%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI NG E L + M++ V + T V+ AC + G+++H +VL+
Sbjct: 279 MISGYFENGVCLEGLRLFGMMIKYPVDPDLMTMTSVITACELLGDDRLGRQIHGYVLRTE 338
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F +D + LI MYS + V R +VSW ++IS + + +A+
Sbjct: 339 FGRDPSIHNSLIPMYSSVGLIEEAETVFSR--TECRDLVSWTAMISGYENCLMPQKALET 396
Query: 121 LKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
K M G+ T V+S CS G+++H + GL++ I +ANS++ MYA
Sbjct: 397 YKMMEAEGIMPDEITIAIVLSACSCLCNLDMGMNLHEVAKQKGLVSYSI-VANSLIDMYA 455
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K +++A IF E +IVSWT+II G EA +M R + P+ V +
Sbjct: 456 KCKCIDKALEIFHSTLEKNIVSWTSIILGLRINNRCFEALFFFREMIR-RLKPNSVTLVC 514
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
++ CA++G L +H+ L++G + + + N ++ MY +CG +E A + F +V +
Sbjct: 515 VLSACARIGALTCGKEIHAHALRTGVSFDGFMPNAILDMYVRCGRMEYAWKQFFSV-DHE 573
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEE 356
V W ++ GYA+ G + A LF+R+++++V PNE T + L AC+ G +++G E
Sbjct: 574 VTSWNILLTGYAERGKGAHATELFQRMVESNVSPNEVTFISILCACSRSGMVAEGLE--- 630
Query: 357 YIVLNGLESNRQVQTSLIH------MFSKCGRINKAKEVFERVPDK-DLAVWSAMINGYA 409
N ++ + +L H + + G++ +A E +++P K D AVW A++N
Sbjct: 631 --YFNSMKYKYSIMPNLKHYACVVDLLGRSGKLEEAYEFIQKMPMKPDPAVWGALLNSCR 688
Query: 410 IH 411
IH
Sbjct: 689 IH 690
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/188 (21%), Positives = 85/188 (45%), Gaps = 2/188 (1%)
Query: 310 LGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQV 369
LG A++ + + + + + C + +G + Y+ ++ + Q+
Sbjct: 84 LGNLDRAMSYLDSMHELRIPVEDDAYVALIRLCEWKRARKEGSRVYSYVSISMSHLSLQL 143
Query: 370 QTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEG 429
+L+ MF + G + A VF R+ ++L W+ ++ GYA G+ D+AL+L+++M V G
Sbjct: 144 GNALLSMFVRFGNLVDAWYVFGRMEKRNLFSWNVLVGGYAKAGLFDEALDLYHRMLWV-G 202
Query: 430 LKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLA 489
+KPD + +L C + G + +G E ++ L+ + + G + A
Sbjct: 203 VKPDVYTFPCVLRTCGGMPNLVRGREIHVHV-IRYGFESDVDVVNALITMYVKCGDVNTA 261
Query: 490 LKTIHEMP 497
+MP
Sbjct: 262 RLVFDKMP 269
>gi|242037917|ref|XP_002466353.1| hypothetical protein SORBIDRAFT_01g006260 [Sorghum bicolor]
gi|241920207|gb|EER93351.1| hypothetical protein SORBIDRAFT_01g006260 [Sorghum bicolor]
Length = 862
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 200/624 (32%), Positives = 349/624 (55%), Gaps = 8/624 (1%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
M+ G + + +M +G N T L CA + G ++HS +K G
Sbjct: 213 MMDGYIKAGDVGGAVRLFRNMRVSGCEPNFATLACFLSVCAAEADLLSGVQLHSLAVKCG 272
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+Q+ V L+ MY+KC + ++ + +P +V+WN +IS + L DEA+ +
Sbjct: 273 LEQEVAVANTLLSMYAKCRCLDDAWRLFELLP--RDDLVTWNGMISGCVQNGLLDEALGL 330
Query: 121 LKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
+M G + T VS++ + +QG +H + + ++ + L ++++ +Y
Sbjct: 331 FCDMLRSGARPDSVTLVSLLPALTDLNGLKQGKEVHGYIIR-NCVHMDAFLVSALVDIYF 389
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K V AR+++D +V +T+I GYV G +A + + + P+ V +
Sbjct: 390 KCRDVRTARNLYDAARAIDVVIGSTVISGYVLNGMSEKALQMFRYLLEQCIKPNAVTVAS 449
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
++ CA + L L +H +L++ Y + +++ L+ MY KCG L+L+ +F + K
Sbjct: 450 VLPACASISALPLGQEIHGYVLRNAYEGKCYVESALMDMYAKCGRLDLSHYIFSKMSLKD 509
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEE 356
W SMI ++Q G P EA++LF+++ ++ N T+++ LSACA L ++ GKEI
Sbjct: 510 EVTWNSMISSFSQNGEPQEALDLFRQMCMEGIKYNNVTISSALSACASLPAIYYGKEIHG 569
Query: 357 YIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQ 416
I+ ++++ +++LI M++KCG + A VFE +PDK+ W+++I+ Y HG+ +
Sbjct: 570 VIIKGPIKADIFAESALIDMYAKCGNMELALRVFEFMPDKNEVSWNSIISAYGAHGLVKE 629
Query: 417 ALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCL 476
+++ ++MQ EG KPD V + +++SAC+H+G+V++GL F+ M + I P +EH+ C+
Sbjct: 630 SVSFLHRMQE-EGYKPDHVTFLALISACAHAGLVEEGLQLFQCMTKEYLIAPRMEHFACM 688
Query: 477 VDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGST 536
VDL R+GR D A++ I +MP + A +W LL AC H NVEL + A++ L L+PG++
Sbjct: 689 VDLYSRSGRLDKAIQFIADMPFKPDAGIWGALLHACRVHRNVELADIASQELFKLDPGNS 748
Query: 537 GNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSV 596
G Y+LM+N+ AG W + R LM D ++ K PG+S V+++ S +FVA D+SH S
Sbjct: 749 GYYVLMSNINAVAGRWDGVSKVRRLMKDNKILKIPGYSWVDVNNSSHLFVASDKSHPESE 808
Query: 597 DIRKTLKELHIKLLEAGYIAEADI 620
DI +LK L +L E GY+ D+
Sbjct: 809 DIYTSLKALLQELREEGYVPRPDL 832
Score = 236 bits (603), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 151/526 (28%), Positives = 269/526 (51%), Gaps = 22/526 (4%)
Query: 1 MIRNSTNNGSFEETLSTYSSML--QTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLK 58
+IR T G + Y M ++ T P V+K+CA + ++ G+ VH
Sbjct: 110 LIRGFTAAGHHSLAVLFYVKMWTHPAAPSPDAHTLPYVVKSCAALGAVSLGRLVHRTARA 169
Query: 59 VGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAI 118
G D +V + LI MYS +R D MP R V WN ++ + +A A+
Sbjct: 170 TGLASDVYVGSALIKMYSDAGLLRDARDAFDGMP--WRDCVLWNVMMDGYIKAGDVGGAV 227
Query: 119 LVLKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSM 174
+ + M V G E + +T +S C+ G+ +H K G L E+ +AN+++SM
Sbjct: 228 RLFRNMRVSGCEPNFATLACFLSVCAAEADLLSGVQLHSLAVKCG-LEQEVAVANTLLSM 286
Query: 175 YAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVF 234
YAK +++A +F+ + +V+W +I G V G ++EA GL M R PD V
Sbjct: 287 YAKCRCLDDAWRLFELLPRDDLVTWNGMISGCVQNGLLDEALGLFCDMLRSGARPDSVTL 346
Query: 235 LNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLE 294
++L+ + L +H ++++ + + L + LV +Y KC D+ AR ++DA
Sbjct: 347 VSLLPALTDLNGLKQGKEVHGYIIRNCVHMDAFLVSALVDIYFKCRDVRTARNLYDAARA 406
Query: 295 KSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEI 354
V + +++I GY G +A+ +F+ LL+ ++PN T+A+ L ACA + +L G+EI
Sbjct: 407 IDVVIGSTVISGYVLNGMSEKALQMFRYLLEQCIKPNAVTVASVLPACASISALPLGQEI 466
Query: 355 EEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMG 414
Y++ N E V+++L+ M++KCGR++ + +F ++ KD W++MI+ ++ +G
Sbjct: 467 HGYVLRNAYEGKCYVESALMDMYAKCGRLDLSHYIFSKMSLKDEVTWNSMISSFSQNGEP 526
Query: 415 DQALNLFYKMQHVEGLKPDAVVYTSILSACS-----HSGMVDDGLSFFKSMQSNFGIEPS 469
+AL+LF +M +EG+K + V +S LSAC+ + G G+ ++++ E +
Sbjct: 527 QEALDLFRQMC-MEGIKYNNVTISSALSACASLPAIYYGKEIHGVIIKGPIKADIFAESA 585
Query: 470 IEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKH 515
L+D+ + G +LAL+ MP + + W ++SA H
Sbjct: 586 ------LIDMYAKCGNMELALRVFEFMPDKNEVS-WNSIISAYGAH 624
Score = 184 bits (468), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 127/485 (26%), Positives = 230/485 (47%), Gaps = 12/485 (2%)
Query: 36 VLKACANINSIWDGKRVHSHVLKVGF---QQDAFVQTGLIDMYSKCSDFVSSRKVLDEMP 92
+L+ C + + G ++H+ + G + T L+ MY F + V +P
Sbjct: 38 LLRGCVSAPHLPLGLQIHARAVVSGALSNHNHLALHTRLLGMYVLARRFRDAVAVFSALP 97
Query: 93 -VRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELS--ASTFVSVVSGCSFRQGI 149
S + WN +I + A + A+L +MW S A T VV C+ +
Sbjct: 98 RAAAGSSLPWNWLIRGFTAAGHHSLAVLFYVKMWTHPAAPSPDAHTLPYVVKSCAALGAV 157
Query: 150 SMHCCVYKLGL---LNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGY 206
S+ V++ L +++ + ++++ MY+ G + +AR FD + V W ++ GY
Sbjct: 158 SLGRLVHRTARATGLASDVYVGSALIKMYSDAGLLRDARDAFDGMPWRDCVLWNVMMDGY 217
Query: 207 VNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNED 266
+ G+V A L MR P+ + CA +L + +HSL +K G E
Sbjct: 218 IKAGDVGGAVRLFRNMRVSGCEPNFATLACFLSVCAAEADLLSGVQLHSLAVKCGLEQEV 277
Query: 267 PLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKT 326
+ N L+SMY KC L+ A R+F+ + + W MI G Q G EA+ LF +L++
Sbjct: 278 AVANTLLSMYAKCRCLDDAWRLFELLPRDDLVTWNGMISGCVQNGLLDEALGLFCDMLRS 337
Query: 327 SVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKA 386
RP+ TL + L A +L L +GKE+ YI+ N + + + ++L+ ++ KC + A
Sbjct: 338 GARPDSVTLVSLLPALTDLNGLKQGKEVHGYIIRNCVHMDAFLVSALVDIYFKCRDVRTA 397
Query: 387 KEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSH 446
+ +++ D+ + S +I+GY ++GM ++AL +F + + +KP+AV S+L AC+
Sbjct: 398 RNLYDAARAIDVVIGSTVISGYVLNGMSEKALQMFRYLLE-QCIKPNAVTVASVLPACAS 456
Query: 447 SGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWA 506
+ G + N E L+D+ + GR DL+ +M ++ + W
Sbjct: 457 ISALPLGQEIHGYVLRN-AYEGKCYVESALMDMYAKCGRLDLSHYIFSKMSLKDEV-TWN 514
Query: 507 PLLSA 511
++S+
Sbjct: 515 SMISS 519
>gi|115463097|ref|NP_001055148.1| Os05g0305300 [Oryza sativa Japonica Group]
gi|113578699|dbj|BAF17062.1| Os05g0305300 [Oryza sativa Japonica Group]
Length = 852
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 222/681 (32%), Positives = 349/681 (51%), Gaps = 62/681 (9%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+IR G + ++ ML+ G + FT P VLKAC + S G H + G
Sbjct: 88 LIREHIKQGRLDSAINVSCRMLRAGTRLDHFTLPHVLKACGELPSYRCGSAFHGLICCNG 147
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVR-LRSVVSWNSIISAHSRACLNDEAIL 119
F+ + F+ L+ MYS+C + + DE+ R + V+SWNSI+SAH ++ A+
Sbjct: 148 FESNVFICNALVAMYSRCGSLEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALD 207
Query: 120 VLKEMWVLGLELSAS------TFVSVVSGCSFRQGISMHCCVYKLGLLNN---EIPLANS 170
+ +M ++ E + + V+++ C + + V+ + N ++ + N+
Sbjct: 208 LFSKMTLIVHEKPTNERSDIISIVNILPACGSLKAVPQTKEVHGNAIRNGTFLDVFVGNA 267
Query: 171 VMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPD 230
++ YAK G + A +F+ + +VSW ++ GY GN AF L MR+ ++ D
Sbjct: 268 LIDAYAKCGLMENAVKVFNMMEFKDVVSWNAMVAGYSQSGNFKAAFELFKNMRKENIPLD 327
Query: 231 LVVFLNLILG-----------------------------------CAQVGNLFLALSMHS 255
+V + +I G CA +G + +H+
Sbjct: 328 MVTWTAVIAGYSQRGCSHEALNVFRQMIFSGSLPNCVTIISVLSACASLGAFSQGMEIHA 387
Query: 256 LLLKS---------GYNNEDPL-DNLLVSMYTKCGDLELARRVFDAVL--EKSVFLWTSM 303
LK+ G +ED + N L+ MY+KC + AR +FD + E++V WT M
Sbjct: 388 YSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVM 447
Query: 304 IGGYAQLGYPSEAVNLFKRLLKTS--VRPNEATLATTLSACAELGSLSKGKEIEEYIVLN 361
IGG+AQ G ++A+ LF ++ V PN T++ L ACA L ++ GK+I Y++ +
Sbjct: 448 IGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRH 507
Query: 362 GL--ESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALN 419
S V LI+M+SKCG ++ A+ VF+ + K W++M+ GY +HG G +AL+
Sbjct: 508 HQYDSSAYFVANCLINMYSKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALD 567
Query: 420 LFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDL 479
+F KM+ G PD + + +L ACSH GMVD GLS+F SM +++G+ P EHY +DL
Sbjct: 568 IFDKMRKA-GFVPDDITFLVVLYACSHCGMVDQGLSYFDSMSADYGLTPRAEHYAYAIDL 626
Query: 480 LGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNY 539
L R GR D A KT+ +MP+E A VW LLSAC H NVEL E+A L+ +N + G+Y
Sbjct: 627 LARFGRLDKAWKTVKDMPMEPTAVVWVALLSACRVHSNVELAEHALNKLVEMNAENDGSY 686
Query: 540 ILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIR 599
L++N++ +AG WK+ A R LM + K PG S V+ F GDRSH LS I
Sbjct: 687 TLISNIYATAGRWKDVARIRHLMKKSGIKKRPGCSWVQGQKGTASFFVGDRSHPLSPQIY 746
Query: 600 KTLKELHIKLLEAGYIAEADI 620
L+ L ++ GY+ E +
Sbjct: 747 ALLESLIDRIKAMGYVPETNF 767
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 75/303 (24%), Positives = 146/303 (48%), Gaps = 10/303 (3%)
Query: 167 LANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMS 226
L V++ Y G + A + + + + V W +I ++ G ++ A + +M R
Sbjct: 53 LGTGVVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRMLRAG 112
Query: 227 VTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELAR 286
D +++ C ++ + + H L+ +G+ + + N LV+MY++CG LE A
Sbjct: 113 TRLDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEAS 172
Query: 287 RVFDAVLEK---SVFLWTSMIGGYAQLGYPSEAVNLFKRLL------KTSVRPNEATLAT 337
+FD + ++ V W S++ + + A++LF ++ T+ R + ++
Sbjct: 173 MIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVN 232
Query: 338 TLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKD 397
L AC L ++ + KE+ + NG + V +LI ++KCG + A +VF + KD
Sbjct: 233 ILPACGSLKAVPQTKEVHGNAIRNGTFLDVFVGNALIDAYAKCGLMENAVKVFNMMEFKD 292
Query: 398 LAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFF 457
+ W+AM+ GY+ G A LF M+ E + D V +T++++ S G + L+ F
Sbjct: 293 VVSWNAMVAGYSQSGNFKAAFELFKNMRK-ENIPLDMVTWTAVIAGYSQRGCSHEALNVF 351
Query: 458 KSM 460
+ M
Sbjct: 352 RQM 354
>gi|297802056|ref|XP_002868912.1| hypothetical protein ARALYDRAFT_352947 [Arabidopsis lyrata subsp.
lyrata]
gi|297314748|gb|EFH45171.1| hypothetical protein ARALYDRAFT_352947 [Arabidopsis lyrata subsp.
lyrata]
Length = 1057
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 211/634 (33%), Positives = 352/634 (55%), Gaps = 18/634 (2%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI G +L + +++ V + + VL AC+ + + GK++H+H+L+ G
Sbjct: 220 MISGCVKMGRSYVSLQLFYQLMEGNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYG 279
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
++DA + LID Y KC ++ K+ D MP + +++SW +++S + + L+ EA+ +
Sbjct: 280 HEKDASLMNVLIDSYVKCGRVRAAHKLFDGMPNK--NIISWTTLLSGYKQNSLHKEAMEL 337
Query: 121 LKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
M GL+ S+++ C+ G +H K L N+ + NS++ MYA
Sbjct: 338 FTSMPKFGLKPDMFACSSILTSCASLHALEFGTQVHAYTIKANL-GNDSYVTNSLIDMYA 396
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGN---VNEAFGLCNQMRRMSVTPDLVV 233
K + EAR +FD +V + +I GY +G +++A + + MR + P L+
Sbjct: 397 KCDCLTEARKVFDIFAADDVVLFNAMIEGYSRLGTQWELHDALNIFHDMRFRLIRPSLLT 456
Query: 234 FLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVL 293
F++L+ A + +L L+ +H L+ K G N + + L+++Y+ C L+ +R VFD +
Sbjct: 457 FVSLLRASASLTSLGLSKQIHGLMFKFGLNLDIFAGSALIAVYSNCYCLKDSRLVFDEMK 516
Query: 294 EKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKE 353
K + +W SM GY Q EA+NLF L + RP+E T ++A L SL G+E
Sbjct: 517 VKDLVIWNSMFSGYVQQSENEEALNLFLELQLSRDRPDEFTFVDMVTAAGNLASLQLGQE 576
Query: 354 IEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGM 413
++ GLE N + +L+ M++KCG A + F+ +D+ W+++I+ YA HG
Sbjct: 577 FHCQLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGE 636
Query: 414 GDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHY 473
G +AL + KM EG++P+ + + +LSACSH+G+V+DGL F+ M FGIEP EHY
Sbjct: 637 GRKALQMLEKMM-CEGIEPNYITFVGVLSACSHAGLVEDGLKQFELML-RFGIEPETEHY 694
Query: 474 LCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNP 533
+C+V LLGRAGR + A + I +MP + A VW LLS C K NVEL EYAA+ + +P
Sbjct: 695 VCMVSLLGRAGRLNEARELIEKMPTKPAAIVWRSLLSGCAKAGNVELAEYAAEMAILSDP 754
Query: 534 GSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHH 593
+G++ L++N++ S GMW +A R M + KEPG S +EI+ V +F++ D+SH
Sbjct: 755 KDSGSFTLLSNIYASKGMWTDAKKVRERMKFEGVVKEPGRSWIEINKEVHIFLSKDKSHC 814
Query: 594 LSVDIRKTLKEL------HIKLLEAGYIAEADIV 621
+ I + L +L H+KL+ G + +++
Sbjct: 815 KANQIYEVLDDLLVQIRGHMKLINDGRRSRCELL 848
Score = 188 bits (478), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 112/403 (27%), Positives = 217/403 (53%), Gaps = 16/403 (3%)
Query: 52 VHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRA 111
VH ++ G + D ++ L+++YS+ V +RKV ++MP R ++V+W++++SA +
Sbjct: 66 VHGQIIVSGLELDTYLSNILMNLYSRAGGMVYARKVFEKMPER--NLVTWSTMVSACNHH 123
Query: 112 CLNDEAILVLKEMWVLGLELSASTFV--SVVSGCSFRQGISMHCCVYKL------GLLNN 163
+E+++V + W + S + ++ S + CS G S V++L +
Sbjct: 124 GFYEESLVVFLDFWRTR-KNSPNEYILSSFIQACSGLDG-SGRWMVFQLQSFLVKSRFDR 181
Query: 164 EIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMR 223
++ + ++ Y K G ++ AR +FD + E S V+WTT+I G V +G + L Q+
Sbjct: 182 DVYVGTLLIDFYLKEGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLM 241
Query: 224 RMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLE 283
+V PD + ++ C+ + L +H+ +L+ G+ + L N+L+ Y KCG +
Sbjct: 242 EGNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGHEKDASLMNVLIDSYVKCGRVR 301
Query: 284 LARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACA 343
A ++FD + K++ WT+++ GY Q EA+ LF + K ++P+ ++ L++CA
Sbjct: 302 AAHKLFDGMPNKNIISWTTLLSGYKQNSLHKEAMELFTSMPKFGLKPDMFACSSILTSCA 361
Query: 344 ELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSA 403
L +L G ++ Y + L ++ V SLI M++KC + +A++VF+ D+ +++A
Sbjct: 362 SLHALEFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTEARKVFDIFAADDVVLFNA 421
Query: 404 MINGYAIHGMG---DQALNLFYKMQHVEGLKPDAVVYTSILSA 443
MI GY+ G ALN+F+ M+ ++P + + S+L A
Sbjct: 422 MIEGYSRLGTQWELHDALNIFHDMR-FRLIRPSLLTFVSLLRA 463
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 81/161 (50%), Gaps = 8/161 (4%)
Query: 358 IVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQA 417
I+++GLE + + L++++S+ G + A++VFE++P+++L WS M++ HG +++
Sbjct: 70 IIVSGLELDTYLSNILMNLYSRAGGMVYARKVFEKMPERNLVTWSTMVSACNHHGFYEES 129
Query: 418 LNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYL--- 474
L +F P+ + +S + AC SG+ G +QS F ++ + +
Sbjct: 130 LVVFLDFWRTRKNSPNEYILSSFIQAC--SGLDGSGRWMVFQLQS-FLVKSRFDRDVYVG 186
Query: 475 -CLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMK 514
L+D + G D A +P E W ++S C+K
Sbjct: 187 TLLIDFYLKEGNIDYARLVFDALP-EKSTVTWTTMISGCVK 226
>gi|188509964|gb|ACD56648.1| putative pentatricopeptide repeat protein [Gossypioides kirkii]
Length = 805
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 207/639 (32%), Positives = 332/639 (51%), Gaps = 75/639 (11%)
Query: 32 TFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEM 91
T+ VL+ CA S+ DGK+VHS + D + L+ +Y+ C D R+V D M
Sbjct: 101 TYSSVLQLCAGSKSLTDGKKVHSIIKSNNVAVDEVLGLKLVSLYATCGDLKEGRRVFDTM 160
Query: 92 PVR-------------------------------------------------LRSVVSWN 102
+ R V+SWN
Sbjct: 161 EKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEGKRPESASELFDKLCDRDVISWN 220
Query: 103 SIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGL-- 160
S+IS + L + + + K+M LG+++ +T +SV+ GC+ +S+ V+ L +
Sbjct: 221 SMISGYVSNGLTERGLEIYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKS 280
Query: 161 -LNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLC 219
I +N+++ MY+K G ++ A +F+++GE ++VSWT++I GY G + A L
Sbjct: 281 TFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAIRLL 340
Query: 220 NQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKC 279
QM + V D+V +++ CA+ G+L +H + + + + N L+ MYTKC
Sbjct: 341 QQMEKEGVKLDVVATTSILHACARSGSLDNGKDVHDYIKANNMESNLFVCNALMDMYTKC 400
Query: 280 GDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTL 339
G ++ A VF ++ K + W +MIG ++P+ T+A L
Sbjct: 401 GSMDGANSVFSTMVVKDIISWNTMIG---------------------ELKPDSRTMACIL 439
Query: 340 SACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLA 399
ACA L +L +GKEI YI+ NG S+R V +L+ ++ KCG + A+ +F+ +P KDL
Sbjct: 440 PACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLV 499
Query: 400 VWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKS 459
W+ MI+GY +HG G++A+ F +M+ G++PD V + SIL ACSHSG+++ G FF
Sbjct: 500 SWTVMISGYGMHGYGNEAIATFNEMRDA-GIEPDEVSFISILYACSHSGLLEQGWRFFYI 558
Query: 460 MQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVE 519
M+++F IEP +EHY C+VDLL R G A + I +P+ A +W LL C +H++E
Sbjct: 559 MKNDFNIEPKLEHYACMVDLLSRTGNLSKAYEFIETLPIAPDATIWGALLCGCRIYHDIE 618
Query: 520 LGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEID 579
L E A+ + L P +TG Y+L+AN++ A W+E R + + L K PG S +EI
Sbjct: 619 LAEKVAERVFELEPENTGYYVLLANIYAEAEKWEEVKRMREKIGKKGLRKNPGCSWIEIK 678
Query: 580 GSVQVFVAGDRSHHL-SVDIRKTLKELHIKLLEAGYIAE 617
G V +FV+G+ S H S I LK++ K+ E GY +
Sbjct: 679 GKVNLFVSGNNSSHPHSKKIESLLKKMRRKMKEEGYFPK 717
Score = 192 bits (487), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 126/418 (30%), Positives = 206/418 (49%), Gaps = 32/418 (7%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI +NG E L Y M+ G+ + T VL CAN ++ GK VHS +K
Sbjct: 222 MISGYVSNGLTERGLEIYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKST 281
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F++ L+DMYSKC D + +V ++M R+VVSW S+I+ ++R +D AI +
Sbjct: 282 FERRINFSNTLLDMYSKCGDLDGALRVFEKMGE--RNVVSWTSMIAGYTRDGRSDGAIRL 339
Query: 121 LKEMWVLGLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
L++M G++L S++ C S G +H + K + + + + N++M MY
Sbjct: 340 LQQMEKEGVKLDVVATTSILHACARSGSLDNGKDVHDYI-KANNMESNLFVCNALMDMYT 398
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K G ++ A S+F + I+SW T+IG + PD
Sbjct: 399 KCGSMDGANSVFSTMVVKDIISWNTMIG---------------------ELKPDSRTMAC 437
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
++ CA + L +H +L++GY+++ + N LV +Y KCG L LAR +FD + K
Sbjct: 438 ILPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKD 497
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEE 356
+ WT MI GY GY +EA+ F + + P+E + + L AC+ G L +G
Sbjct: 498 LVSWTVMISGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWRF-F 556
Query: 357 YIVLN--GLESNRQVQTSLIHMFSKCGRINKAKEVFERVP-DKDLAVWSAMINGYAIH 411
YI+ N +E + ++ + S+ G ++KA E E +P D +W A++ G I+
Sbjct: 557 YIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYEFIETLPIAPDATIWGALLCGCRIY 614
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 94/360 (26%), Positives = 168/360 (46%), Gaps = 59/360 (16%)
Query: 193 ETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALS 252
+ + + I + +GN+ A L ++ + + + +++ CA +L
Sbjct: 63 DRQVTDYNAKILHFCQLGNLENAMELVCMCQKSEL--ETKTYSSVLQLCAGSKSLTDGKK 120
Query: 253 MHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGY 312
+HS++ + ++ L LVS+Y CGDL+ RRVFD + +K+V+LW M+ YA++G
Sbjct: 121 VHSIIKSNNVAVDEVLGLKLVSLYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGD 180
Query: 313 PSEAVNLFKRLLKTSV---RPNE------------------------------------- 332
E++ LFK +++ + RP
Sbjct: 181 FKESICLFKIMVEKGIEGKRPESASELFDKLCDRDVISWNSMISGYVSNGLTERGLEIYK 240
Query: 333 -----------ATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCG 381
AT+ + L CA G+LS GK + + + E +L+ M+SKCG
Sbjct: 241 QMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSTFERRINFSNTLLDMYSKCG 300
Query: 382 RINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSIL 441
++ A VFE++ ++++ W++MI GY G D A+ L +M+ EG+K D V TSIL
Sbjct: 301 DLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAIRLLQQMEK-EGVKLDVVATTSIL 359
Query: 442 SACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLC--LVDLLGRAGRFDLALKTIHEMPVE 499
AC+ SG +D+G +++N +E ++ ++C L+D+ + G D A M V+
Sbjct: 360 HACARSGSLDNGKDVHDYIKAN-NMESNL--FVCNALMDMYTKCGSMDGANSVFSTMVVK 416
>gi|302760085|ref|XP_002963465.1| hypothetical protein SELMODRAFT_79732 [Selaginella moellendorffii]
gi|300168733|gb|EFJ35336.1| hypothetical protein SELMODRAFT_79732 [Selaginella moellendorffii]
Length = 829
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 205/629 (32%), Positives = 350/629 (55%), Gaps = 21/629 (3%)
Query: 8 NGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFV 67
+G +ETL M Q GV ++ TF L +C + S+ DG R+H V+ + D V
Sbjct: 123 SGQSKETLRALERMRQDGVRPDAVTFITALGSCGDPESLRDGIRIHQMVVDSRLEIDPKV 182
Query: 68 QTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVL 127
L++MY KC +++V +M R R+V+SW+ + AH+ EA+ + M +L
Sbjct: 183 SNALLNMYKKCGSLSHAKRVFAKME-RTRNVISWSIMAGAHALHGNVWEALRHFRFMLLL 241
Query: 128 GLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNE 183
G++ + S V+++S CS + G +H C+ L +E+ +AN+VM+MY + G V E
Sbjct: 242 GIKATKSAMVTILSACSSPALVQDGRLIHSCI-ALSGFESELLVANAVMTMYGRCGAVEE 300
Query: 184 ARSIFDEIGET--SIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGC 241
AR +FD + E +VSW ++ YV+ +A L +RM + D V +++L+ C
Sbjct: 301 ARKVFDAMDEALRDVVSWNIMLSAYVHNDRGKDAIQL---YQRMQLRADKVTYVSLLSAC 357
Query: 242 AQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWT 301
+ ++ L +H ++ + N LVSMY KCG AR VFD + ++S+ WT
Sbjct: 358 SSAEDVGLGRVLHKQIVNDELEKNVIVGNALVSMYAKCGSHTEARAVFDKMEQRSIISWT 417
Query: 302 SMIGGYAQLGYPSEAVNLFKRLLK-------TSVRPNEATLATTLSACAELGSLSKGKEI 354
++I Y + +EA +LF+++L+ V+P+ T L+ACA++ +L +GK +
Sbjct: 418 TIISAYVRRRLVAEACHLFQQMLELEKNGSSQRVKPDALAFVTILNACADVSALEQGKMV 477
Query: 355 EEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDK-DLAVWSAMINGYAIHGM 413
E GL S++ V T++++++ KCG I + + +F+ V + D+ +W+AMI YA G
Sbjct: 478 SEQAASCGLSSDKAVGTAVVNLYGKCGEIEEGRRIFDGVCSRPDVQLWNAMIAVYAQFGQ 537
Query: 414 GDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNF-GIEPSIEH 472
+AL LF++M+ +EG++PD+ + SIL ACSH+G+ D G S+F SM + + + +I+H
Sbjct: 538 SHEALKLFWRME-MEGVRPDSFSFVSILLACSHTGLEDQGKSYFTSMTTEYRNVTRTIQH 596
Query: 473 YLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLN 532
+ C+ DLLGR GR A + + ++PV+ A W LL+AC H +++ + A LL L
Sbjct: 597 FGCVADLLGRGGRLKEAEEFLEKLPVKPDAVAWTSLLAACRNHRDLKRAKEVANKLLRLE 656
Query: 533 PGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSH 592
P Y+ ++N++ W A R M ++ + KE G S +EI + F GD +H
Sbjct: 657 PRCATGYVALSNIYAELQKWHAVAKVRKFMAEQGVKKERGVSTIEIGKYMHDFATGDDAH 716
Query: 593 HLSVDIRKTLKELHIKLLEAGYIAEADIV 621
+ +IR+ L +LH ++ E GY+ + +V
Sbjct: 717 PRNREIREELAKLHSQMKECGYVPDTKMV 745
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 120/502 (23%), Positives = 250/502 (49%), Gaps = 21/502 (4%)
Query: 23 QTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGF-QQDAFVQTGLIDMYSKCSDF 81
+ V + T+ +L+ CA ++ +G+++HS +K + + ++ MY+ C
Sbjct: 36 KQAVRAENATYARLLQRCARAQALPEGRKIHSLAVKHNLLPGNLILGNHIVSMYAHCDSP 95
Query: 82 VSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVS 141
++ D + R++ SW +++A + + + E + L+ M G+ A TF++ +
Sbjct: 96 GDAKAAFDALE--QRNLYSWTGLVAAFAISGQSKETLRALERMRQDGVRPDAVTFITALG 153
Query: 142 GC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGET-SI 196
C S R GI +H V L + ++N++++MY K G ++ A+ +F ++ T ++
Sbjct: 154 SCGDPESLRDGIRIHQMVVD-SRLEIDPKVSNALLNMYKKCGSLSHAKRVFAKMERTRNV 212
Query: 197 VSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSL 256
+SW+ + G + GNV EA M + + + ++ C+ + +HS
Sbjct: 213 ISWSIMAGAHALHGNVWEALRHFRFMLLLGIKATKSAMVTILSACSSPALVQDGRLIHSC 272
Query: 257 LLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLE--KSVFLWTSMIGGYAQLGYPS 314
+ SG+ +E + N +++MY +CG +E AR+VFDA+ E + V W M+ Y
Sbjct: 273 IALSGFESELLVANAVMTMYGRCGAVEEARKVFDAMDEALRDVVSWNIMLSAYVHNDRGK 332
Query: 315 EAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLI 374
+A+ L++R+ +R ++ T + LSAC+ + G+ + + IV + LE N V +L+
Sbjct: 333 DAIQLYQRM---QLRADKVTYVSLLSACSSAEDVGLGRVLHKQIVNDELEKNVIVGNALV 389
Query: 375 HMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEG----- 429
M++KCG +A+ VF+++ + + W+ +I+ Y + +A +LF +M +E
Sbjct: 390 SMYAKCGSHTEARAVFDKMEQRSIISWTTIISAYVRRRLVAEACHLFQQMLELEKNGSSQ 449
Query: 430 -LKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDL 488
+KPDA+ + +IL+AC+ ++ G ++ G+ +V+L G+ G +
Sbjct: 450 RVKPDALAFVTILNACADVSALEQG-KMVSEQAASCGLSSDKAVGTAVVNLYGKCGEIEE 508
Query: 489 ALKTIHEMPVEVQAQVWAPLLS 510
+ + Q+W +++
Sbjct: 509 GRRIFDGVCSRPDVQLWNAMIA 530
Score = 169 bits (427), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 116/428 (27%), Positives = 208/428 (48%), Gaps = 20/428 (4%)
Query: 126 VLGLELSA-----STFVSVVSGCSFRQ----GISMHCCVYKLGLLNNEIPLANSVMSMYA 176
VL LE A +T+ ++ C+ Q G +H K LL + L N ++SMYA
Sbjct: 31 VLDLEKQAVRAENATYARLLQRCARAQALPEGRKIHSLAVKHNLLPGNLILGNHIVSMYA 90
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
+A++ FD + + ++ SWT ++ + G E +MR+ V PD V F+
Sbjct: 91 HCDSPGDAKAAFDALEQRNLYSWTGLVAAFAISGQSKETLRALERMRQDGVRPDAVTFIT 150
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
+ C +L + +H +++ S + + N L++MY KCG L A+RVF A +E++
Sbjct: 151 ALGSCGDPESLRDGIRIHQMVVDSRLEIDPKVSNALLNMYKKCGSLSHAKRVF-AKMERT 209
Query: 297 --VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEI 354
V W+ M G +A G EA+ F+ +L ++ ++ + T LSAC+ + G+ I
Sbjct: 210 RNVISWSIMAGAHALHGNVWEALRHFRFMLLLGIKATKSAMVTILSACSSPALVQDGRLI 269
Query: 355 EEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPD--KDLAVWSAMINGYAIHG 412
I L+G ES V +++ M+ +CG + +A++VF+ + + +D+ W+ M++ Y +
Sbjct: 270 HSCIALSGFESELLVANAVMTMYGRCGAVEEARKVFDAMDEALRDVVSWNIMLSAYVHND 329
Query: 413 MGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEH 472
G A+ L+ +MQ L+ D V Y S+LSACS + V G K + N +E ++
Sbjct: 330 RGKDAIQLYQRMQ----LRADKVTYVSLLSACSSAEDVGLGRVLHKQI-VNDELEKNVIV 384
Query: 473 YLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLN 532
LV + + G A +M + W ++SA ++ V + + +L L
Sbjct: 385 GNALVSMYAKCGSHTEARAVFDKME-QRSIISWTTIISAYVRRRLVAEACHLFQQMLELE 443
Query: 533 PGSTGNYI 540
+ +
Sbjct: 444 KNGSSQRV 451
>gi|50251760|dbj|BAD27693.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|222623393|gb|EEE57525.1| hypothetical protein OsJ_07836 [Oryza sativa Japonica Group]
Length = 667
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 214/596 (35%), Positives = 329/596 (55%), Gaps = 22/596 (3%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
++R+ T G E L+ YS+M + TFP KACA + G+ VH L G
Sbjct: 83 LLRSYTGLGCHREALAVYSAMRAF----DHLTFPFAAKACAGLRLGRHGRAVHCRALAAG 138
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F D +VQ LI MY C D ++ V M R R+VVSWN++I+ + + A+ V
Sbjct: 139 FGGDTYVQNALISMYMSCGDVGAAEAVFGAM--RNRTVVSWNAVIAGCVKNGYAERALEV 196
Query: 121 LKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
EM G+ + +T VSV+ C+ G ++H V GL + + + N+++ MY
Sbjct: 197 FGEMAADGVGIDRATVVSVLPACAQAKDLNTGRAVHRLVEDKGL-GDYVAVKNALIDMYG 255
Query: 177 KFGKVNEARSIFDEIG-ETSIVSWTTIIGGYVNVGNVNEAFGL-CNQMRRMSVTPDLVVF 234
K + +AR +FD + +VSWT +IG YV EA L C + + P+ V
Sbjct: 256 KCRSLEDARRVFDHCKHDKDVVSWTAMIGAYVLNDRAFEAISLGCQMLMSGAAWPNGVTM 315
Query: 235 LNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLE 294
+ L+ CA + + A H+L ++ G ++ ++ L+ Y +CG ++L R LE
Sbjct: 316 VYLLSACASMPSGKHAKCTHALCIRLGLKSDIAVETALIDAYARCGKMKLMR----LTLE 371
Query: 295 KSVF---LWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKG 351
+ + W + + GY G +A+ LFKR++ SVRP+ AT+A+ L A AE L +G
Sbjct: 372 RGSWRAETWNAALSGYTVSGREKKAIELFKRMIAESVRPDSATMASILPAYAESADLKEG 431
Query: 352 KEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIH 411
K I +++ G + ++ T LI ++SK G ++ A +F+ +P+KD+ W+ +I GY IH
Sbjct: 432 KNIHCFLLTLGFLRSTEIATGLIDVYSKAGDLDAAWALFQWLPEKDVVAWTTIIAGYGIH 491
Query: 412 GMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIE 471
G A+ L+ +M G KP+ V ++L ACSH+GM+D+G+ FK M++ G+ P+ E
Sbjct: 492 GHARTAILLYDRMVESGG-KPNTVTIATLLYACSHAGMIDEGIKVFKDMRNVHGLMPNGE 550
Query: 472 HYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTL 531
HY CLVD+LGRAGR + A + I +MP E VW LL AC+ H NVE GE AAK L L
Sbjct: 551 HYSCLVDMLGRAGRIEEAHRLIQDMPFEPSTSVWGALLGACVLHKNVEFGEVAAKRLFQL 610
Query: 532 NPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVA 587
+P +TG+Y+L+ N++ +A W++ R +M +R L KEPG S VE SVQ A
Sbjct: 611 DPENTGSYVLLGNIYAAADRWRDVQDVRRMMVERGLLKEPGSSLVEAR-SVQCRTA 665
>gi|449439011|ref|XP_004137281.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39350-like [Cucumis sativus]
Length = 787
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 216/618 (34%), Positives = 332/618 (53%), Gaps = 24/618 (3%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTG-VHGNSFTFPLVLKACANINSIWDGKRVHSHVLKV 59
+I+ + G + L + SM+ +G + +TFPLV+KAC+ ++ + G +H L
Sbjct: 154 IIKMYVDKGFHFDALRVFDSMICSGKCWPDKYTFPLVIKACSVMSMLNVGVLIHGRALVS 213
Query: 60 GFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAIL 119
GF + FVQ L+ MY C +R+V + M RSVVSWN++IS + +EA+
Sbjct: 214 GFSSNMFVQNSLLAMYMNCGKVGLARQVFNVM--LKRSVVSWNTMISGWFQNGRPEEALA 271
Query: 120 VLKEMWVLGLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMY 175
V M +E ++T VS + C GI +H V K L +I + N+++ MY
Sbjct: 272 VFNSMMDARVEPDSATIVSALPSCGHLKELELGIKVHKLVQK-NHLQEKIEVRNALVDMY 330
Query: 176 AKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFL 235
++ G ++EA +F E E +++WT++I GY+ GN A LC M+ V P+ V
Sbjct: 331 SRCGGMDEASLVFAETKEKDVITWTSMINGYIMNGNAKSALALCPAMQLDGVVPNAVTLA 390
Query: 236 NLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEK 295
+L+ CA + L S+H+ +++ +++ + L+ MY KC + + +VF K
Sbjct: 391 SLLSACASLCCLKQGKSLHAWVMRKKLDSDVLVVTALIDMYAKCNAVSYSFQVFAKTSMK 450
Query: 296 SVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIE 355
W +++ G EAV LFK +L V N AT + + A A L L + +
Sbjct: 451 RTVPWNALLSGLIHNELAREAVGLFKSMLIEEVEANHATFNSVIPAYAILADLKQVMNLH 510
Query: 356 EYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVP--DKDLAVWSAMINGYAIHGM 413
Y+V +G S V T LI M+SKCG ++ A ++F+ +P +KD+ VWS +I GY +HG
Sbjct: 511 SYLVRSGFISKIAVITGLIDMYSKCGSLDYAHKIFDEIPNKEKDIIVWSVLIAGYGMHGH 570
Query: 414 GDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHY 473
G+ A+ LF +M H G++P+ + +TS+L ACSH G+VDDGL+ FK M N+ P HY
Sbjct: 571 GETAVLLFNQMVH-SGMQPNEITFTSVLHACSHRGLVDDGLTLFKYMIENYPSSPLPNHY 629
Query: 474 LCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNP 533
C+VDLLGRAGR D A I MP + +W LL AC+ H NVELGE AA+ L L P
Sbjct: 630 TCVVDLLGRAGRLDEAYDLIKSMPFQQNHSIWGALLGACLIHQNVELGEVAAERLFELEP 689
Query: 534 GSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHH 593
STGNYIL+AN++ + G WK+A ++ +L P + + FV H
Sbjct: 690 ESTGNYILLANIYAAVGRWKDA-------ENHKLQLSPPPKE------INTFVTDLNMHP 736
Query: 594 LSVDIRKTLKELHIKLLE 611
+ R EL + L++
Sbjct: 737 ILTKCRALKSELELALIQ 754
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 155/570 (27%), Positives = 266/570 (46%), Gaps = 26/570 (4%)
Query: 3 RNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQ 62
RN+ +N + + LS S++ N +L A S+ K +H H + G
Sbjct: 57 RNNLSNSNTTKALSKSKSLI-----ANVHRCDSLLCHYAATRSLNKTKILHGHTITSGLL 111
Query: 63 QDA-FVQ--TGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAIL 119
F+ + L Y+ C +RK+ D++ S+ WN+II + + +A+
Sbjct: 112 HSPNFIHLPSHLAVSYAFCGCVPLARKLFDDLSDP--SLFLWNAIIKMYVDKGFHFDALR 169
Query: 120 VLKEMWVLG-LELSASTFVSVVSGCSFRQGISMHCCVYKLGLLN---NEIPLANSVMSMY 175
V M G TF V+ CS +++ ++ L++ + + + NS+++MY
Sbjct: 170 VFDSMICSGKCWPDKYTFPLVIKACSVMSMLNVGVLIHGRALVSGFSSNMFVQNSLLAMY 229
Query: 176 AKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFL 235
GKV AR +F+ + + S+VSW T+I G+ G EA + N M V PD +
Sbjct: 230 MNCGKVGLARQVFNVMLKRSVVSWNTMISGWFQNGRPEEALAVFNSMMDARVEPDSATIV 289
Query: 236 NLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEK 295
+ + C + L L + +H L+ K+ + + N LV MY++CG ++ A VF EK
Sbjct: 290 SALPSCGHLKELELGIKVHKLVQKNHLQEKIEVRNALVDMYSRCGGMDEASLVFAETKEK 349
Query: 296 SVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIE 355
V WTSMI GY G A+ L + V PN TLA+ LSACA L L +GK +
Sbjct: 350 DVITWTSMINGYIMNGNAKSALALCPAMQLDGVVPNAVTLASLLSACASLCCLKQGKSLH 409
Query: 356 EYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGD 415
+++ L+S+ V T+LI M++KC ++ + +VF + K W+A+++G + +
Sbjct: 410 AWVMRKKLDSDVLVVTALIDMYAKCNAVSYSFQVFAKTSMKRTVPWNALLSGLIHNELAR 469
Query: 416 QALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLC 475
+A+ LF M +E ++ + + S++ A + + ++ + + G I
Sbjct: 470 EAVGLFKSML-IEEVEANHATFNSVIPAYAILADLKQVMNLHSYLVRS-GFISKIAVITG 527
Query: 476 LVDLLGRAGRFDLALKTIHEMP-VEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPG 534
L+D+ + G D A K E+P E VW+ L++ H + E + ++ G
Sbjct: 528 LIDMYSKCGSLDYAHKIFDEIPNKEKDIIVWSVLIAGYGMHGHGETAVLLFNQM--VHSG 585
Query: 535 STGNYILMANLFTSAGMWKEAATARGLMDD 564
N I FTS A + RGL+DD
Sbjct: 586 MQPNEI----TFTSV---LHACSHRGLVDD 608
>gi|449514605|ref|XP_004164425.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g49170, chloroplastic-like [Cucumis sativus]
Length = 849
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 217/631 (34%), Positives = 348/631 (55%), Gaps = 14/631 (2%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
M+ NN L T+ M++ G + N + F +AC+ + G + V+K G
Sbjct: 139 MVSCFANNNMGFRALLTFVDMIENGYYPNEYCFAAATRACSTAEFVSVGDSIFGFVIKTG 198
Query: 61 F-QQDAFVQTGLIDMYSKC-SDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAI 118
+ Q D V GLIDM+ K D VS+ KV ++MP R + V+W +I+ + EAI
Sbjct: 199 YLQSDVCVGCGLIDMFVKGRGDLVSAFKVFEKMPER--NAVTWTLMITRLMQFGYAGEAI 256
Query: 119 LVLKEMWVLGLELSASTFVSVVSGCSFRQ----GISMHCCVYKLGLLNNEIPLANSVMSM 174
+ +M G E T V+S C+ + G +H + GL + + +++M
Sbjct: 257 DLFLDMIFSGYEPDRFTLSGVISACANMELLLLGQQLHSQAIRHGLTLDRC-VGCCLINM 315
Query: 175 YAKF---GKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNE-AFGLCNQMRRMSVTPD 230
YAK G + AR IFD+I + ++ SWT +I GYV G +E A L M V P+
Sbjct: 316 YAKCSVDGSMCAARKIFDQILDHNVFSWTAMITGYVQKGGYDEEALDLFRGMILTHVIPN 375
Query: 231 LVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFD 290
F + + CA + L + + + +K G+++ + + N L+SMY + G ++ AR+ FD
Sbjct: 376 HFTFSSTLKACANLAALRIGEQVFTHAVKLGFSSVNCVANSLISMYARSGRIDDARKAFD 435
Query: 291 AVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSK 350
+ EK++ + ++I YA+ EA+ LF + + + T A+ LS A +G++ K
Sbjct: 436 ILFEKNLISYNTVIDAYAKNLNSEEALELFNEIEDQGMGASAFTFASLLSGAASIGTIGK 495
Query: 351 GKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAI 410
G++I ++ +GL+ N+ V +LI M+S+CG I A +VFE + D+++ W+++I G+A
Sbjct: 496 GEQIHARVIKSGLKLNQSVCNALISMYSRCGNIESAFQVFEDMEDRNVISWTSIITGFAK 555
Query: 411 HGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSI 470
HG QAL LF+KM EG++P+ V Y ++LSACSH G+V++G FKSM + G+ P +
Sbjct: 556 HGFATQALELFHKMLE-EGVRPNEVTYIAVLSACSHVGLVNEGWKHFKSMYTEHGVIPRM 614
Query: 471 EHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLT 530
EHY C+VD+LGR+G A++ I+ MP + A VW L AC H N+ELG++AAK ++
Sbjct: 615 EHYACIVDILGRSGSLSEAIQFINSMPYKADALVWRTFLGACRVHGNLELGKHAAKMIIE 674
Query: 531 LNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDR 590
P YIL++NL+ S W E + R M ++ L KE G S VE++ V F GD
Sbjct: 675 QEPHDPAAYILLSNLYASISKWDEVSNIRKAMKEKXLIKEAGCSWVEVENKVHKFYVGDT 734
Query: 591 SHHLSVDIRKTLKELHIKLLEAGYIAEADIV 621
SH + +I L+ L +K+ + GY+ D V
Sbjct: 735 SHPKAAEIYDELQNLSVKIKKLGYVPNLDFV 765
Score = 218 bits (554), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 146/519 (28%), Positives = 257/519 (49%), Gaps = 15/519 (2%)
Query: 7 NNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAF 66
NNG + +ST M+ G H + T+ L LK C S G VH + + Q D+
Sbjct: 43 NNGRLHKAISTLEHMVHQGSHPDLQTYSLFLKKCIRTRSFDIGTLVHEKLTQSDLQLDSV 102
Query: 67 VQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWV 126
LI +YSKC + + + M R ++SW++++S + + A+L +M
Sbjct: 103 TLNSLISLYSKCGQWEKATSIFRLMGSS-RDLISWSAMVSCFANNNMGFRALLTFVDMIE 161
Query: 127 LGLELSASTFVSVVSGCSFRQ----GISMHCCVYKLGLLNNEIPLANSVMSMYAK-FGKV 181
G + F + CS + G S+ V K G L +++ + ++ M+ K G +
Sbjct: 162 NGYYPNEYCFAAATRACSTAEFVSVGDSIFGFVIKTGYLQSDVCVGCGLIDMFVKGRGDL 221
Query: 182 NEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGC 241
A +F+++ E + V+WT +I + G EA L M PD +I C
Sbjct: 222 VSAFKVFEKMPERNAVTWTLMITRLMQFGYAGEAIDLFLDMIFSGYEPDRFTLSGVISAC 281
Query: 242 AQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKC---GDLELARRVFDAVLEKSVF 298
A + L L +HS ++ G + + L++MY KC G + AR++FD +L+ +VF
Sbjct: 282 ANMELLLLGQQLHSQAIRHGLTLDRCVGCCLINMYAKCSVDGSMCAARKIFDQILDHNVF 341
Query: 299 LWTSMIGGYAQL-GYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEY 357
WT+MI GY Q GY EA++LF+ ++ T V PN T ++TL ACA L +L G+++ +
Sbjct: 342 SWTAMITGYVQKGGYDEEALDLFRGMILTHVIPNHFTFSSTLKACANLAALRIGEQVFTH 401
Query: 358 IVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQA 417
V G S V SLI M+++ GRI+ A++ F+ + +K+L ++ +I+ YA + ++A
Sbjct: 402 AVKLGFSSVNCVANSLISMYARSGRIDDARKAFDILFEKNLISYNTVIDAYAKNLNSEEA 461
Query: 418 LNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFF-KSMQSNFGIEPSIEHYLCL 476
L LF +++ +G+ A + S+LS + G + G + ++S + S+ + L
Sbjct: 462 LELFNEIED-QGMGASAFTFASLLSGAASIGTIGKGEQIHARVIKSGLKLNQSVCN--AL 518
Query: 477 VDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKH 515
+ + R G + A + +M + W +++ KH
Sbjct: 519 ISMYSRCGNIESAFQVFEDME-DRNVISWTSIITGFAKH 556
Score = 95.5 bits (236), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 115/243 (47%), Gaps = 4/243 (1%)
Query: 207 VNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNED 266
+N G +++A M PDL + + C + + + +H L +S +
Sbjct: 42 INNGRLHKAISTLEHMVHQGSHPDLQTYSLFLKKCIRTRSFDIGTLVHEKLTQSDLQLDS 101
Query: 267 PLDNLLVSMYTKCGDLELARRVFDAV-LEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLK 325
N L+S+Y+KCG E A +F + + + W++M+ +A A+ F +++
Sbjct: 102 VTLNSLISLYSKCGQWEKATSIFRLMGSSRDLISWSAMVSCFANNNMGFRALLTFVDMIE 161
Query: 326 TSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNG-LESNRQVQTSLIHMFSKC-GRI 383
PNE A AC+ +S G I +++ G L+S+ V LI MF K G +
Sbjct: 162 NGYYPNEYCFAAATRACSTAEFVSVGDSIFGFVIKTGYLQSDVCVGCGLIDMFVKGRGDL 221
Query: 384 NKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSA 443
A +VFE++P+++ W+ MI G +A++LF M G +PD + ++SA
Sbjct: 222 VSAFKVFEKMPERNAVTWTLMITRLMQFGYAGEAIDLFLDMI-FSGYEPDRFTLSGVISA 280
Query: 444 CSH 446
C++
Sbjct: 281 CAN 283
>gi|218191314|gb|EEC73741.1| hypothetical protein OsI_08374 [Oryza sativa Indica Group]
Length = 667
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 214/596 (35%), Positives = 330/596 (55%), Gaps = 22/596 (3%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
++R+ T G E L+ YS+M + TFP KACA + G+ VH L G
Sbjct: 83 LLRSYTGLGCHREALAVYSAMRAF----DHLTFPFAAKACAGLRLGRHGRAVHCRALAAG 138
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F D +VQ LI MY C D ++ V M R R+VVSWN++I+ + + A+ V
Sbjct: 139 FGGDTYVQNALISMYMSCGDVGAAEAVFGAM--RNRTVVSWNAVIAGCVKNGYAERALEV 196
Query: 121 LKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
EM G+ + +T VSV+ C+ G ++H V GL + + + N+++ MY
Sbjct: 197 FGEMAADGVGIDRATVVSVLPACAQAKDLNTGRAVHRLVEDKGL-GDYVAVKNALIDMYG 255
Query: 177 KFGKVNEARSIFDEIG-ETSIVSWTTIIGGYVNVGNVNEAFGL-CNQMRRMSVTPDLVVF 234
K + +AR +FD + +VSWT +IG YV EA L C + + P+ V
Sbjct: 256 KCRSLEDARRVFDHCKHDKDVVSWTAMIGAYVLNDRAFEAISLGCQMLMSGAAWPNGVTM 315
Query: 235 LNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLE 294
+ L+ CA + + A H+L ++ G ++ ++ L+ Y +CG ++L R LE
Sbjct: 316 VYLLSACASMPSGKHAKCTHALCIRLGLKSDIAVETALIDAYARCGKMKLMR----LTLE 371
Query: 295 KSVF---LWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKG 351
+ + W + + GY G +A+ LFKR++ SVRP+ AT+A+ L A AE L +G
Sbjct: 372 RGSWRAETWNAALSGYTVSGREKKAIELFKRMIAESVRPDSATMASILPAYAESADLKEG 431
Query: 352 KEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIH 411
K I +++ G + ++ T LI ++SK G ++ A +F+ +P+KD+ W+ +I GY+IH
Sbjct: 432 KNIHCFLLTLGFLRSTEIATGLIDVYSKAGDLDAAWALFQWLPEKDVVAWTTIIAGYSIH 491
Query: 412 GMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIE 471
G A+ L+ +M G KP+ V ++L ACSH+GM+D+G+ FK M++ G+ P+ E
Sbjct: 492 GHARTAILLYDRMVESGG-KPNTVTIATLLYACSHAGMIDEGIKVFKDMRNVHGLMPNGE 550
Query: 472 HYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTL 531
HY CLVD+LGRAGR + A + I +MP E VW LL AC+ H NVE GE AAK L L
Sbjct: 551 HYSCLVDMLGRAGRIEEAHRLIQDMPFEPSTSVWGALLGACVLHKNVEFGEVAAKRLFQL 610
Query: 532 NPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVA 587
+P +TG+Y+L+ N++ +A W++ R +M +R L KEPG S VE SVQ A
Sbjct: 611 DPENTGSYVLLGNIYAAADRWRDVQDVRRMMVERGLLKEPGSSLVEAR-SVQCRTA 665
>gi|296082505|emb|CBI21510.3| unnamed protein product [Vitis vinifera]
Length = 746
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 211/623 (33%), Positives = 347/623 (55%), Gaps = 11/623 (1%)
Query: 1 MIRNSTNNGSFEETLSTYSSM-LQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKV 59
M+ + G EE L + + ++G H N F V++AC + + G ++H V++
Sbjct: 121 MVSMYSQQGYSEEALMVFVDLQRKSGEHPNEFVLASVIRACTQLGVVEKGAQLHGFVVRS 180
Query: 60 GFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAIL 119
GF QD +V T LID YSK + +R V D++ + + V+W +II+ +++ + ++
Sbjct: 181 GFDQDVYVGTSLIDFYSKNGNIEEARLVFDQLSEK--TAVTWTTIIAGYTKCGRSAVSLE 238
Query: 120 VLKEMWVLGLELSASTFVSVVSGCSFRQ----GISMHCCVYKLGLLNNEIPLANSVMSMY 175
+ +M + SV+S CS + G +H V + G ++ + N ++ Y
Sbjct: 239 LFAQMRETNVVPDRYVVSSVLSACSMLEFLEGGKQIHAYVLRRGT-EMDVSVVNVLIDFY 297
Query: 176 AKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFL 235
K +V R +FD++ +I+SWTT+I GY+ EA L +M R+ PD
Sbjct: 298 TKCNRVKAGRKLFDQMVVKNIISWTTMISGYMQNSFDWEAMKLFGEMNRLGWKPDGFACT 357
Query: 236 NLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEK 295
+++ C L +H+ +K+ +++ + N L+ MY K L A++VFD + E+
Sbjct: 358 SVLTSCGSREALEQGRQVHAYTIKANLESDEFVKNGLIDMYAKSNLLIDAKKVFDVMAEQ 417
Query: 296 SVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIE 355
+V + +MI GY+ SEA+ LF + +PNE T A ++A + L SL G++
Sbjct: 418 NVISYNAMIEGYSSQEKLSEALELFHEMRVRLQKPNEFTFAALITAASNLASLRHGQQFH 477
Query: 356 EYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGD 415
+V GL+ V +L+ M++KCG I +A+++F +D+ W++MI+ +A HG +
Sbjct: 478 NQLVKMGLDFCPFVTNALVDMYAKCGSIEEARKMFNSSIWRDVVCWNSMISTHAQHGEAE 537
Query: 416 QALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLC 475
+AL +F +M EG++P+ V + ++LSACSH+G V+DGL+ F SM FGI+P EHY C
Sbjct: 538 EALGMFREMMK-EGIQPNYVTFVAVLSACSHAGRVEDGLNHFNSM-PGFGIKPGTEHYAC 595
Query: 476 LVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGS 535
+V LLGR+G+ A + I +MP+E A VW LLSAC NVELG+YAA+ ++ +P
Sbjct: 596 VVSLLGRSGKLFEAKEFIEKMPIEPAAIVWRSLLSACRIAGNVELGKYAAEMAISTDPKD 655
Query: 536 TGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLS 595
+G+YIL++N+F S GMW + R MD + KEPG S +E++ V VF+A D +H
Sbjct: 656 SGSYILLSNIFASKGMWADVKKVRDRMDSSEVVKEPGRSWIEVNNKVNVFIARDTTHR-E 714
Query: 596 VDIRKTLKELHIKLLEAGYIAEA 618
DI L L + AGY+ +A
Sbjct: 715 ADIGSVLDILIQHIKGAGYVPDA 737
Score = 218 bits (556), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 133/493 (26%), Positives = 258/493 (52%), Gaps = 13/493 (2%)
Query: 33 FPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMP 92
F +L+ + N I K +H ++ G Q D F+ LI++ SK ++R V D+MP
Sbjct: 52 FANLLQLSISRNPIIHYKIIHGQIIVSGLQSDTFLANILINVCSKSDRVDNARVVFDKMP 111
Query: 93 VRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVL-GLELSASTFVSVVSGCS----FRQ 147
+++++W+S++S +S+ ++EA++V ++ G + SV+ C+ +
Sbjct: 112 --HKNLITWSSMVSMYSQQGYSEEALMVFVDLQRKSGEHPNEFVLASVIRACTQLGVVEK 169
Query: 148 GISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYV 207
G +H V + G + ++ + S++ Y+K G + EAR +FD++ E + V+WTTII GY
Sbjct: 170 GAQLHGFVVRSGF-DQDVYVGTSLIDFYSKNGNIEEARLVFDQLSEKTAVTWTTIIAGYT 228
Query: 208 NVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDP 267
G + L QMR +V PD V +++ C+ + L +H+ +L+ G +
Sbjct: 229 KCGRSAVSLELFAQMRETNVVPDRYVVSSVLSACSMLEFLEGGKQIHAYVLRRGTEMDVS 288
Query: 268 LDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTS 327
+ N+L+ YTKC ++ R++FD ++ K++ WT+MI GY Q + EA+ LF + +
Sbjct: 289 VVNVLIDFYTKCNRVKAGRKLFDQMVVKNIISWTTMISGYMQNSFDWEAMKLFGEMNRLG 348
Query: 328 VRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAK 387
+P+ + L++C +L +G+++ Y + LES+ V+ LI M++K + AK
Sbjct: 349 WKPDGFACTSVLTSCGSREALEQGRQVHAYTIKANLESDEFVKNGLIDMYAKSNLLIDAK 408
Query: 388 EVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHS 447
+VF+ + ++++ ++AMI GY+ +AL LF++M+ V KP+ + ++++A S+
Sbjct: 409 KVFDVMAEQNVISYNAMIEGYSSQEKLSEALELFHEMR-VRLQKPNEFTFAALITAASNL 467
Query: 448 GMVDDGLSFFKSM-QSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWA 506
+ G F + + P + + LVD+ + G + A K + + W
Sbjct: 468 ASLRHGQQFHNQLVKMGLDFCPFVTN--ALVDMYAKCGSIEEARKMFNS-SIWRDVVCWN 524
Query: 507 PLLSACMKHHNVE 519
++S +H E
Sbjct: 525 SMISTHAQHGEAE 537
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 93/188 (49%), Gaps = 2/188 (1%)
Query: 327 SVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKA 386
++RP A L + K I I+++GL+S+ + LI++ SK R++ A
Sbjct: 44 NLRPKRREFANLLQLSISRNPIIHYKIIHGQIIVSGLQSDTFLANILINVCSKSDRVDNA 103
Query: 387 KEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSH 446
+ VF+++P K+L WS+M++ Y+ G ++AL +F +Q G P+ V S++ AC+
Sbjct: 104 RVVFDKMPHKNLITWSSMVSMYSQQGYSEEALMVFVDLQRKSGEHPNEFVLASVIRACTQ 163
Query: 447 SGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWA 506
G+V+ G + + G + + L+D + G + A + + + E A W
Sbjct: 164 LGVVEKGAQLHGFVVRS-GFDQDVYVGTSLIDFYSKNGNIEEA-RLVFDQLSEKTAVTWT 221
Query: 507 PLLSACMK 514
+++ K
Sbjct: 222 TIIAGYTK 229
>gi|255543164|ref|XP_002512645.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223548606|gb|EEF50097.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 716
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 201/625 (32%), Positives = 349/625 (55%), Gaps = 8/625 (1%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+I+ + +E + +S + + G N F F +LK ++ +H+ + K+G
Sbjct: 12 LIQGYVQSFQLDEVVDLFSRVHREGHELNPFVFTTILKLLVSVECAELAYSLHACIYKLG 71
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+ +AFV T LID Y+ C S+R+ D + + +VSW +++ ++ +++ +
Sbjct: 72 HESNAFVGTALIDAYAVCGSVNSARQAFD--AIACKDMVSWTGMVACYAENDRFQDSLQL 129
Query: 121 LKEMWVLGLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
EM ++G + TF V+ C +F G S+H CV K ++ + ++ +Y
Sbjct: 130 FAEMRMVGFNPNHFTFAGVLKACIGLEAFSVGKSVHGCVLKT-CYEMDLYVGVGLLDLYT 188
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
KFG N+ +F+E+ + ++ W+ +I Y EA L QMRR V P+ F +
Sbjct: 189 KFGDANDVLRVFEEMPKHDVIPWSFMISRYAQSNQSREAVELFGQMRRAFVLPNQFTFAS 248
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
++ CA + NL L +H +LK G + + N L+ +Y KCG L+ + ++F + ++
Sbjct: 249 VLQSCASIENLQLGKQVHCHVLKVGLDGNVFVSNALMDVYAKCGRLDNSMKLFMELPNRN 308
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEE 356
W +MI GY Q G +A++L+K +L+ V+ +E T ++ L ACA L ++ G +I
Sbjct: 309 EVTWNTMIVGYVQSGDGDKALSLYKNMLECQVQASEVTYSSVLRACASLAAMELGTQIHS 368
Query: 357 YIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQ 416
+ + + V +LI M++KCG I A+ VF+ + ++D W+AMI+GY++HG+ +
Sbjct: 369 LSLKTIYDKDVVVGNALIDMYAKCGSIKNARLVFDMLSERDEISWNAMISGYSMHGLVGE 428
Query: 417 ALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCL 476
AL F MQ E + P+ + + SILSACS++G++D G ++FKSM ++GIEP +EHY C+
Sbjct: 429 ALKAFQMMQETECV-PNKLTFVSILSACSNAGLLDIGQNYFKSMVQDYGIEPCMEHYTCM 487
Query: 477 VDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGST 536
V LLGR+G D A+K I E+P+E +VW LL AC+ H++V+LG +A+ +L ++P
Sbjct: 488 VWLLGRSGHLDKAVKLIEEIPLEPNVKVWRALLGACVIHNDVDLGIMSAQQILQIDPQDE 547
Query: 537 GNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSV 596
++L++N++ W A+ R M ++ + KEPG S +E G V F GD SH
Sbjct: 548 ATHVLLSNIYARTRRWNSVASVRKFMKNKGVKKEPGLSWIENQGIVHYFSVGDTSHPDMK 607
Query: 597 DIRKTLKELHIKLLEAGYIAEADIV 621
I L+ L++K +AGY+ + + V
Sbjct: 608 MISGMLEWLNMKTEKAGYVPDLNAV 632
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 84/308 (27%), Positives = 147/308 (47%), Gaps = 8/308 (2%)
Query: 193 ETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALS 252
+ + VS+ T+I GYV ++E L +++ R + VF ++ V LA S
Sbjct: 3 DRNTVSFVTLIQGYVQSFQLDEVVDLFSRVHREGHELNPFVFTTILKLLVSVECAELAYS 62
Query: 253 MHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGY 312
+H+ + K G+ + + L+ Y CG + AR+ FDA+ K + WT M+ YA+
Sbjct: 63 LHACIYKLGHESNAFVGTALIDAYAVCGSVNSARQAFDAIACKDMVSWTGMVACYAENDR 122
Query: 313 PSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTS 372
+++ LF + PN T A L AC L + S GK + ++ E + V
Sbjct: 123 FQDSLQLFAEMRMVGFNPNHFTFAGVLKACIGLEAFSVGKSVHGCVLKTCYEMDLYVGVG 182
Query: 373 LIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKP 432
L+ +++K G N VFE +P D+ WS MI+ YA +A+ LF +M+ L P
Sbjct: 183 LLDLYTKFGDANDVLRVFEEMPKHDVIPWSFMISRYAQSNQSREAVELFGQMRRAFVL-P 241
Query: 433 DAVVYTSILSACSHSGMVDDGLSFFKSMQSN---FGIEPSIEHYLCLVDLLGRAGRFDLA 489
+ + S+L +C+ + L K + + G++ ++ L+D+ + GR D +
Sbjct: 242 NQFTFASVLQSCASI----ENLQLGKQVHCHVLKVGLDGNVFVSNALMDVYAKCGRLDNS 297
Query: 490 LKTIHEMP 497
+K E+P
Sbjct: 298 MKLFMELP 305
>gi|224106277|ref|XP_002314110.1| predicted protein [Populus trichocarpa]
gi|222850518|gb|EEE88065.1| predicted protein [Populus trichocarpa]
Length = 738
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 222/633 (35%), Positives = 346/633 (54%), Gaps = 56/633 (8%)
Query: 29 NSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDM--YSKCSDFVSSRK 86
N T P+++ CAN + K++H+H+L+ G D T L S S + K
Sbjct: 29 NPSTVPILIDKCANKKHL---KQLHAHMLRTGLFFDPPSATKLFTACALSSPSSLDYACK 85
Query: 87 VLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEM----------WVLGLELSASTF 136
V D++P ++ +WN++I A + + + +LV +M + + A+T
Sbjct: 86 VFDQIP--RPNLYTWNTLIRAFASSPKPIQGLLVFIQMLHESQRFPNSYTFPFVIKAATE 143
Query: 137 VSVVSGCSFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSI 196
VS S G ++H V K +++ ++NS++ Y+ G ++ A +F +I E I
Sbjct: 144 VS-----SLLAGQAIHGMVMKASF-GSDLFISNSLIHFYSSLGDLDSAYLVFSKIVEKDI 197
Query: 197 VSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSL 256
VSW ++I G+V G+ EA L +M+ + P+ V + ++ CA+ +L
Sbjct: 198 VSWNSMISGFVQGGSPEEALQLFKRMKMENARPNRVTMVGVLSACAKRIDLEFGRWACDY 257
Query: 257 LLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLG----- 311
+ ++G + L N ++ MY KCG LE ARR+FD + EK + WT+MI GYA++G
Sbjct: 258 IERNGIDINLILSNAMLDMYVKCGSLEDARRLFDKMEEKDIVSWTTMIDGYAKVGDYDAA 317
Query: 312 --------------------------YPSEAVNLFKRL-LKTSVRPNEATLATTLSACAE 344
P EA+ +F+ L L + +PNE TLA+TL+ACA+
Sbjct: 318 RRVFDVMPREDITAWNALISSYQQNGKPKEALAIFRELQLNKNTKPNEVTLASTLAACAQ 377
Query: 345 LGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAM 404
LG++ G I YI G++ N + TSLI M+SKCG + KA EVF V +D+ VWSAM
Sbjct: 378 LGAMDLGGWIHVYIKKQGIKLNFHITTSLIDMYSKCGHLEKALEVFYSVERRDVFVWSAM 437
Query: 405 INGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNF 464
I G A+HG G A++LF KMQ + +KP+AV +T++L ACSHSG+VD+G FF M+ +
Sbjct: 438 IAGLAMHGHGRAAIDLFSKMQETK-VKPNAVTFTNLLCACSHSGLVDEGRLFFNQMRPVY 496
Query: 465 GIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYA 524
G+ P +HY C+VD+LGRAG + A++ I +MP+ A VW LL AC + NVEL E A
Sbjct: 497 GVVPGSKHYACMVDILGRAGCLEEAVELIEKMPIVPSASVWGALLGACRIYGNVELAEMA 556
Query: 525 AKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQV 584
LL + + G Y+L++N++ AG W + R M L KEPG S +E++G +
Sbjct: 557 CSRLLETDSNNHGAYVLLSNIYAKAGKWDCVSRLRQHMKVSGLEKEPGCSSIEVNGIIHE 616
Query: 585 FVAGDRSHHLSVDIRKTLKELHIKLLEAGYIAE 617
F+ GD SH LS +I L E+ ++ GY+++
Sbjct: 617 FLVGDNSHPLSTEIYSKLDEIVARIKSTGYVSD 649
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 90/413 (21%), Positives = 166/413 (40%), Gaps = 64/413 (15%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI GS EE L + M N T VL ACA + G+ ++ + G
Sbjct: 203 MISGFVQGGSPEEALQLFKRMKMENARPNRVTMVGVLSACAKRIDLEFGRWACDYIERNG 262
Query: 61 FQQDAFVQTGLIDMYSKC-------------------------------SDFVSSRKVLD 89
+ + ++DMY KC D+ ++R+V D
Sbjct: 263 IDINLILSNAMLDMYVKCGSLEDARRLFDKMEEKDIVSWTTMIDGYAKVGDYDAARRVFD 322
Query: 90 EMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWV-LGLELSASTFVSVVSGC----S 144
MP + +WN++IS++ + EA+ + +E+ + + + T S ++ C +
Sbjct: 323 VMP--REDITAWNALISSYQQNGKPKEALAIFRELQLNKNTKPNEVTLASTLAACAQLGA 380
Query: 145 FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIG 204
G +H + K G+ N + S++ MY+K G + +A +F + + W+ +I
Sbjct: 381 MDLGGWIHVYIKKQGIKLN-FHITTSLIDMYSKCGHLEKALEVFYSVERRDVFVWSAMIA 439
Query: 205 GYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSG--- 261
G G+ A L ++M+ V P+ V F NL+ C+ HS L+ G
Sbjct: 440 GLAMHGHGRAAIDLFSKMQETKVKPNAVTFTNLLCACS-----------HSGLVDEGRLF 488
Query: 262 YNNEDPLDNL---------LVSMYTKCGDLELARRVFDAV-LEKSVFLWTSMIGGYAQLG 311
+N P+ + +V + + G LE A + + + + S +W +++G G
Sbjct: 489 FNQMRPVYGVVPGSKHYACMVDILGRAGCLEEAVELIEKMPIVPSASVWGALLGACRIYG 548
Query: 312 YPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLE 364
A RLL+T N + A+ G + +++ ++GLE
Sbjct: 549 NVELAEMACSRLLETDSN-NHGAYVLLSNIYAKAGKWDCVSRLRQHMKVSGLE 600
>gi|225423499|ref|XP_002274432.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 738
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 216/623 (34%), Positives = 341/623 (54%), Gaps = 43/623 (6%)
Query: 36 VLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVS-SRKVLDEMPVR 94
+L C + ++ K++HS ++K G F + LI+ + S F + S +L +
Sbjct: 38 LLSTCKSFQNL---KQIHSQIIKTGLHNTQFALSKLIE-FCAISPFGNLSYALLLFESIE 93
Query: 95 LRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCS----FRQGIS 150
+ WN++I +S + AI M + G+E ++ TF ++ C+ ++G
Sbjct: 94 QPNQFIWNTMIRGNSLSSSPVGAIDFYVRMLLCGVEPNSYTFPFLLKSCAKVGATQEGKQ 153
Query: 151 MHCCVYKLGLLNNEIPLANSVMSMYAKFGKV----------------------------- 181
+H V KLGL ++ + S+++MYA+ G++
Sbjct: 154 IHGHVLKLGLESDPF-VHTSLINMYAQNGELGYAELVFSKSSLRDAVSFTALITGYTLRG 212
Query: 182 --NEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLIL 239
++AR +F+EI VSW +I GY G EA +M+R +V P+ + ++
Sbjct: 213 CLDDARRLFEEIPVRDAVSWNAMIAGYAQSGRFEEALAFFQEMKRANVAPNESTMVTVLS 272
Query: 240 GCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFL 299
CAQ G+L L + S + G + L N L+ MY+KCGDL+ AR +F+ + EK +
Sbjct: 273 ACAQSGSLELGNWVRSWIEDHGLGSNLRLVNALIDMYSKCGDLDKARDLFEGICEKDIIS 332
Query: 300 WTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIV 359
W MIGGY+ + EA+ LF+++ +++V PN+ T + L ACA LG+L GK I YI
Sbjct: 333 WNVMIGGYSHMNSYKEALALFRKMQQSNVEPNDVTFVSILPACAYLGALDLGKWIHAYID 392
Query: 360 LNGLE-SNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQAL 418
L +N + TSLI M++KCG I AK+VF + K L W+AMI+G A+HG + AL
Sbjct: 393 KKFLGLTNTSLWTSLIDMYAKCGNIEAAKQVFAGMKPKSLGSWNAMISGLAMHGHANMAL 452
Query: 419 NLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVD 478
LF +M+ EG +PD + + +LSACSH+G+V+ G F SM ++ I P ++HY C++D
Sbjct: 453 ELFRQMRD-EGFEPDDITFVGVLSACSHAGLVELGRQCFSSMVEDYDISPKLQHYGCMID 511
Query: 479 LLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGN 538
LLGRAG FD A + M ++ +W LL AC H NVELGE+AAK+L L P + G
Sbjct: 512 LLGRAGLFDEAEALMKNMEMKPDGAIWGSLLGACRVHGNVELGEFAAKHLFELEPENPGA 571
Query: 539 YILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDI 598
Y+L++N++ +AG W + A R ++D+ + K PG S +E+D V F+ GD+ H S DI
Sbjct: 572 YVLLSNIYATAGRWDDVARIRTKLNDKGMKKVPGCSSIEVDSVVHEFLVGDKVHEQSQDI 631
Query: 599 RKTLKELHIKLLEAGYIAEADIV 621
K L E+ L +AG++ + V
Sbjct: 632 YKMLDEIDQLLEKAGHVPDTSEV 654
Score = 227 bits (579), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 161/525 (30%), Positives = 266/525 (50%), Gaps = 79/525 (15%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MIR ++ + S + Y ML GV NS+TFP +LK+CA + + +GK++H HVLK+G
Sbjct: 103 MIRGNSLSSSPVGAIDFYVRMLLCGVEPNSYTFPFLLKSCAKVGATQEGKQIHGHVLKLG 162
Query: 61 FQQDAFVQTGLIDMY---------------SKCSDFVS----------------SRKVLD 89
+ D FV T LI+MY S D VS +R++ +
Sbjct: 163 LESDPFVHTSLINMYAQNGELGYAELVFSKSSLRDAVSFTALITGYTLRGCLDDARRLFE 222
Query: 90 EMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGC----SF 145
E+PV R VSWN++I+ ++++ +EA+ +EM + + ST V+V+S C S
Sbjct: 223 EIPV--RDAVSWNAMIAGYAQSGRFEEALAFFQEMKRANVAPNESTMVTVLSACAQSGSL 280
Query: 146 RQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGG 205
G + + GL +N + L N+++ MY+K G +++AR +F+ I E I+SW +IGG
Sbjct: 281 ELGNWVRSWIEDHGLGSN-LRLVNALIDMYSKCGDLDKARDLFEGICEKDIISWNVMIGG 339
Query: 206 YVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKS--GYN 263
Y ++ + EA L +M++ +V P+ V F++++ CA +G L L +H+ + K G
Sbjct: 340 YSHMNSYKEALALFRKMQQSNVEPNDVTFVSILPACAYLGALDLGKWIHAYIDKKFLGLT 399
Query: 264 NEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRL 323
N L L+ MY KCG++E A++VF + KS+ W +MI G A G+ + A+ LF+++
Sbjct: 400 NTS-LWTSLIDMYAKCGNIEAAKQVFAGMKPKSLGSWNAMISGLAMHGHANMALELFRQM 458
Query: 324 LKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRI 383
P++ T LSAC+ G + G RQ +S++
Sbjct: 459 RDEGFEPDDITFVGVLSACSHAGLVELG---------------RQCFSSMV--------- 494
Query: 384 NKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSA 443
E ++ P L + MI+ G+ D+A L M+ +KPD ++ S+L A
Sbjct: 495 ----EDYDISP--KLQHYGCMIDLLGRAGLFDEAEALMKNME----MKPDGAIWGSLLGA 544
Query: 444 CSHSGMVDDGLSFFKSMQSNFGIEP-SIEHYLCLVDLLGRAGRFD 487
C G V+ G K + F +EP + Y+ L ++ AGR+D
Sbjct: 545 CRVHGNVELGEFAAKHL---FELEPENPGAYVLLSNIYATAGRWD 586
>gi|356555301|ref|XP_003545972.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Glycine max]
Length = 858
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 201/614 (32%), Positives = 346/614 (56%), Gaps = 10/614 (1%)
Query: 13 ETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLI 72
E + + M+++G+ N F+ ++L ACA + G+++H +LK+G D F L+
Sbjct: 166 EAVGLFKEMVRSGIMPNEFSISIILNACAGLQEGDLGRKIHGLMLKMGLDLDQFSANALV 225
Query: 73 DMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELS 132
DMYSK + + V + + VVSWN+II+ ND A+++L EM G +
Sbjct: 226 DMYSKAGEIEGAVAVFQD--IAHPDVVSWNAIIAGCVLHDCNDLALMLLDEMKGSGTRPN 283
Query: 133 ASTFVSVVSGCS---FRQ-GISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIF 188
T S + C+ F++ G +H + K+ ++++ A ++ MY+K +++AR +
Sbjct: 284 MFTLSSALKACAAMGFKELGRQLHSSLIKMDA-HSDLFAAVGLVDMYSKCEMMDDARRAY 342
Query: 189 DEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLF 248
D + + I++W +I GY G+ +A L ++M + + ++ A + +
Sbjct: 343 DSMPKKDIIAWNALISGYSQCGDHLDAVSLFSKMFSEDIDFNQTTLSTVLKSVASLQAIK 402
Query: 249 LALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYA 308
+ +H++ +KSG ++ + N L+ Y KC ++ A ++F+ + + +TSMI Y+
Sbjct: 403 VCKQIHTISIKSGIYSDFYVINSLLDTYGKCNHIDEASKIFEERTWEDLVAYTSMITAYS 462
Query: 309 QLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQ 368
Q G EA+ L+ ++ ++P+ ++ L+ACA L + +GK++ + + G +
Sbjct: 463 QYGDGEEALKLYLQMQDADIKPDPFICSSLLNACANLSAYEQGKQLHVHAIKFGFMCDIF 522
Query: 369 VQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVE 428
SL++M++KCG I A F +P++ + WSAMI GYA HG G +AL LF +M +
Sbjct: 523 ASNSLVNMYAKCGSIEDADRAFSEIPNRGIVSWSAMIGGYAQHGHGKEALRLFNQMLR-D 581
Query: 429 GLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDL 488
G+ P+ + S+L AC+H+G+V++G +F+ M+ FGI+P+ EHY C++DLLGR+G+ +
Sbjct: 582 GVPPNHITLVSVLCACNHAGLVNEGKQYFEKMEVMFGIKPTQEHYACMIDLLGRSGKLNE 641
Query: 489 ALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTS 548
A++ ++ +P E VW LL A H N+ELG+ AAK L L P +G ++L+AN++ S
Sbjct: 642 AVELVNSIPFEADGFVWGALLGAARIHKNIELGQKAAKMLFDLEPEKSGTHVLLANIYAS 701
Query: 549 AGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKELHIK 608
AGMW+ A R M D ++ KEPG S +EI V F+ GDRSH S +I L +L
Sbjct: 702 AGMWENVAKVRKFMKDSKVKKEPGMSWIEIKDKVYTFIVGDRSHSRSDEIYAKLDQLGDL 761
Query: 609 LLEAGY--IAEADI 620
L +AGY I E DI
Sbjct: 762 LSKAGYSSIVEIDI 775
Score = 248 bits (632), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 152/501 (30%), Positives = 268/501 (53%), Gaps = 9/501 (1%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
++ NG EE L ++ M GV N FTFP VLKAC+ + G++VH + G
Sbjct: 53 LLSGYVQNGFVEEALLVFNEMCLLGVKCNEFTFPSVLKACSMKRDLNMGRKVHGMAVVTG 112
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F+ D FV L+ MY+KC SR++ + R+VVSWN++ S + ++ L EA+ +
Sbjct: 113 FESDGFVANTLVVMYAKCGLLDDSRRLFG--GIVERNVVSWNALFSCYVQSELCGEAVGL 170
Query: 121 LKEMWVLGLELSASTFVSVVSGCSFRQ----GISMHCCVYKLGLLNNEIPLANSVMSMYA 176
KEM G+ + + +++ C+ Q G +H + K+GL ++ AN+++ MY+
Sbjct: 171 FKEMVRSGIMPNEFSISIILNACAGLQEGDLGRKIHGLMLKMGLDLDQFS-ANALVDMYS 229
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K G++ A ++F +I +VSW II G V + A L ++M+ P++ +
Sbjct: 230 KAGEIEGAVAVFQDIAHPDVVSWNAIIAGCVLHDCNDLALMLLDEMKGSGTRPNMFTLSS 289
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
+ CA +G L +HS L+K +++ LV MY+KC ++ ARR +D++ +K
Sbjct: 290 ALKACAAMGFKELGRQLHSSLIKMDAHSDLFAAVGLVDMYSKCEMMDDARRAYDSMPKKD 349
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEE 356
+ W ++I GY+Q G +AV+LF ++ + N+ TL+T L + A L ++ K+I
Sbjct: 350 IIAWNALISGYSQCGDHLDAVSLFSKMFSEDIDFNQTTLSTVLKSVASLQAIKVCKQIHT 409
Query: 357 YIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQ 416
+ +G+ S+ V SL+ + KC I++A ++FE +DL +++MI Y+ +G G++
Sbjct: 410 ISIKSGIYSDFYVINSLLDTYGKCNHIDEASKIFEERTWEDLVAYTSMITAYSQYGDGEE 469
Query: 417 ALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCL 476
AL L+ +MQ + +KPD + +S+L+AC++ + G FG I L
Sbjct: 470 ALKLYLQMQDAD-IKPDPFICSSLLNACANLSAYEQGKQ-LHVHAIKFGFMCDIFASNSL 527
Query: 477 VDLLGRAGRFDLALKTIHEMP 497
V++ + G + A + E+P
Sbjct: 528 VNMYAKCGSIEDADRAFSEIP 548
Score = 202 bits (515), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 118/377 (31%), Positives = 207/377 (54%), Gaps = 5/377 (1%)
Query: 51 RVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSR 110
+H+H++K GF +D ++ L+ +YSKC F +RK++DE VVSW+S++S + +
Sbjct: 2 ELHAHLIKFGFSRDPSLRNHLVTLYSKCRRFGYARKLVDESSEL--DVVSWSSLLSGYVQ 59
Query: 111 ACLNDEAILVLKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGLLN---NEIPL 167
+EA+LV EM +LG++ + TF SV+ CS ++ ++M V+ + ++ ++ +
Sbjct: 60 NGFVEEALLVFNEMCLLGVKCNEFTFPSVLKACSMKRDLNMGRKVHGMAVVTGFESDGFV 119
Query: 168 ANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSV 227
AN+++ MYAK G ++++R +F I E ++VSW + YV EA GL +M R +
Sbjct: 120 ANTLVVMYAKCGLLDDSRRLFGGIVERNVVSWNALFSCYVQSELCGEAVGLFKEMVRSGI 179
Query: 228 TPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARR 287
P+ ++ CA + L +H L+LK G + + N LV MY+K G++E A
Sbjct: 180 MPNEFSISIILNACAGLQEGDLGRKIHGLMLKMGLDLDQFSANALVDMYSKAGEIEGAVA 239
Query: 288 VFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGS 347
VF + V W ++I G A+ L + + RPN TL++ L ACA +G
Sbjct: 240 VFQDIAHPDVVSWNAIIAGCVLHDCNDLALMLLDEMKGSGTRPNMFTLSSALKACAAMGF 299
Query: 348 LSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMING 407
G+++ ++ S+ L+ M+SKC ++ A+ ++ +P KD+ W+A+I+G
Sbjct: 300 KELGRQLHSSLIKMDAHSDLFAAVGLVDMYSKCEMMDDARRAYDSMPKKDIIAWNALISG 359
Query: 408 YAIHGMGDQALNLFYKM 424
Y+ G A++LF KM
Sbjct: 360 YSQCGDHLDAVSLFSKM 376
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 104/363 (28%), Positives = 188/363 (51%), Gaps = 4/363 (1%)
Query: 149 ISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVN 208
+ +H + K G + + L N ++++Y+K + AR + DE E +VSW++++ GYV
Sbjct: 1 MELHAHLIKFGF-SRDPSLRNHLVTLYSKCRRFGYARKLVDESSELDVVSWSSLLSGYVQ 59
Query: 209 VGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPL 268
G V EA + N+M + V + F +++ C+ +L + +H + + +G+ ++ +
Sbjct: 60 NGFVEEALLVFNEMCLLGVKCNEFTFPSVLKACSMKRDLNMGRKVHGMAVVTGFESDGFV 119
Query: 269 DNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSV 328
N LV MY KCG L+ +RR+F ++E++V W ++ Y Q EAV LFK ++++ +
Sbjct: 120 ANTLVVMYAKCGLLDDSRRLFGGIVERNVVSWNALFSCYVQSELCGEAVGLFKEMVRSGI 179
Query: 329 RPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKE 388
PNE +++ L+ACA L G++I ++ GL+ ++ +L+ M+SK G I A
Sbjct: 180 MPNEFSISIILNACAGLQEGDLGRKIHGLMLKMGLDLDQFSANALVDMYSKAGEIEGAVA 239
Query: 389 VFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSG 448
VF+ + D+ W+A+I G +H D AL L +M+ G +P+ +S L AC+ G
Sbjct: 240 VFQDIAHPDVVSWNAIIAGCVLHDCNDLALMLLDEMKG-SGTRPNMFTLSSALKACAAMG 298
Query: 449 MVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPL 508
+ G S+ + + LVD+ + D A + MP + W L
Sbjct: 299 FKELGRQLHSSL-IKMDAHSDLFAAVGLVDMYSKCEMMDDARRAYDSMP-KKDIIAWNAL 356
Query: 509 LSA 511
+S
Sbjct: 357 ISG 359
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 100/211 (47%), Gaps = 9/211 (4%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI + G EE L Y M + + F +L ACAN+++ GK++H H +K G
Sbjct: 457 MITAYSQYGDGEEALKLYLQMQDADIKPDPFICSSLLNACANLSAYEQGKQLHVHAIKFG 516
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F D F L++MY+KC + + E+P R +VSW+++I +++ EA+ +
Sbjct: 517 FMCDIFASNSLVNMYAKCGSIEDADRAFSEIPN--RGIVSWSAMIGGYAQHGHGKEALRL 574
Query: 121 LKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVY--KLGLLNNEIPLAN---SVMSMY 175
+M G+ + T VSV+ C+ G+ Y K+ ++ P ++ +
Sbjct: 575 FNQMLRDGVPPNHITLVSVLCACN-HAGLVNEGKQYFEKMEVMFGIKPTQEHYACMIDLL 633
Query: 176 AKFGKVNEARSIFDEIG-ETSIVSWTTIIGG 205
+ GK+NEA + + I E W ++G
Sbjct: 634 GRSGKLNEAVELVNSIPFEADGFVWGALLGA 664
>gi|449451649|ref|XP_004143574.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19191,
mitochondrial-like [Cucumis sativus]
gi|449516723|ref|XP_004165396.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19191,
mitochondrial-like [Cucumis sativus]
Length = 651
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 200/623 (32%), Positives = 350/623 (56%), Gaps = 10/623 (1%)
Query: 2 IRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGF 61
IR + N G+ + L+ + + G+ N+FTFP + KACA ++ + + + +H+HV+K F
Sbjct: 24 IRGAVNQGNASKALALFHQLKLNGLQPNNFTFPFLSKACAKLSHLTNSQIIHTHVVKSPF 83
Query: 62 QQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVL 121
D +VQT ++DMY KC + + D+MPVR ++ SWN++I S+ D +
Sbjct: 84 YSDIYVQTAMVDMYVKCGKVDDAYNLFDKMPVR--NIASWNAMIIGFSQIGSLDRVFNLF 141
Query: 122 KEMWVLGLELSASTFV----SVVSGCSFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAK 177
M ++G A+T + +V+S S R ++H + GL + + ++N+ ++ Y+K
Sbjct: 142 MGMRLVGTRPDAATVIGLTRAVISAKSLRFLKAVHAIGIETGL-DADTSVSNTWIAAYSK 200
Query: 178 FGKVNEARSIFDEIGET--SIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFL 235
G++ A+ +F I +T S VSW ++I Y + G +A + PD +
Sbjct: 201 CGELQLAKMVFHGIQKTARSSVSWNSLIACYAHFGKYVDAVKSYKGLLCDGFKPDASTII 260
Query: 236 NLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEK 295
+L+ C Q L +H + G +++ L N L+SMY++CGD+ A +FD + +
Sbjct: 261 SLLSSCQQPEALIYGFLIHGHGFQLGCDSDISLINTLISMYSRCGDISSATILFDGMSIR 320
Query: 296 SVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIE 355
+ WT+MI GY+++G +A+ LF + +T +P+ T+ + +S C + G+L G I+
Sbjct: 321 TCVSWTAMISGYSEVGRVDDALVLFNAMEETGEKPDIVTVLSLISGCGKTGALGLGHWID 380
Query: 356 EYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGD 415
Y L+ L+ + V +LI M++KCG +N A+E+F +P++ + W+AMI A++G
Sbjct: 381 NYASLHELKKDVVVCNALIDMYAKCGSLNDAREIFYSLPNRTVVSWTAMIAACALNGEFR 440
Query: 416 QALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLC 475
+AL+LF + G++P+ + + ++L AC H G ++ G F M +GI P ++HY C
Sbjct: 441 EALDLFSLLSE-SGIEPNNITFLAVLQACCHGGYLEKGRECFMMMTERYGINPGLDHYSC 499
Query: 476 LVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGS 535
++DLLGR G+ AL+ I +MP++ +W LL AC H+N+E+GEY ++ L L P
Sbjct: 500 MIDLLGRKGKLIEALEVIQDMPMKPDEGIWGALLGACKIHNNMEIGEYVSRYLFELQPRV 559
Query: 536 TGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLS 595
+++ MAN++ S G W E A R M ++ K PG S V+++G VF DRSHH S
Sbjct: 560 AVSFVEMANIYASVGRWDEVAAMRKTMRSNQMRKSPGKSVVQVNGMSHVFFVEDRSHHDS 619
Query: 596 VDIRKTLKELHIKLLEAGYIAEA 618
+ I + L L +++ + + + A
Sbjct: 620 LLIYEALGNLAMQMKQKEFSSHA 642
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 142/483 (29%), Positives = 237/483 (49%), Gaps = 37/483 (7%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI + GS + + + M G ++ T + +A + S+ K VH+ ++ G
Sbjct: 124 MIIGFSQIGSLDRVFNLFMGMRLVGTRPDAATVIGLTRAVISAKSLRFLKAVHAIGIETG 183
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
D V I YSKC + ++ V + RS VSWNS+I+ ++ +A+
Sbjct: 184 LDADTSVSNTWIAAYSKCGELQLAKMVFHGIQKTARSSVSWNSLIACYAHFGKYVDAVKS 243
Query: 121 LKEMWVLGLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
K + G + AST +S++S C + G +H ++LG +++I L N+++SMY+
Sbjct: 244 YKGLLCDGFKPDASTIISLLSSCQQPEALIYGFLIHGHGFQLG-CDSDISLINTLISMYS 302
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
+ G ++ A +FD + + VSWT +I GY VG V++A L N M PD+V L+
Sbjct: 303 RCGDISSATILFDGMSIRTCVSWTAMISGYSEVGRVDDALVLFNAMEETGEKPDIVTVLS 362
Query: 237 LILGCAQVGNLFLA------LSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFD 290
LI GC + G L L S+H L + + N L+ MY KCG L AR +F
Sbjct: 363 LISGCGKTGALGLGHWIDNYASLHEL------KKDVVVCNALIDMYAKCGSLNDAREIFY 416
Query: 291 AVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSK 350
++ ++V WT+MI A G EA++LF L ++ + PN T L AC G L K
Sbjct: 417 SLPNRTVVSWTAMIAACALNGEFREALDLFSLLSESGIEPNNITFLAVLQACCHGGYLEK 476
Query: 351 GKE-----IEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDK-DLAVWSAM 404
G+E E Y + GL+ + +I + + G++ +A EV + +P K D +W A+
Sbjct: 477 GRECFMMMTERYGINPGLDH----YSCMIDLLGRKGKLIEALEVIQDMPMKPDEGIWGAL 532
Query: 405 INGYAIHG---MGDQALNLFYKMQHVEGLKPD-AVVYTSILSACSHSGMVDDGLSFFKSM 460
+ IH +G+ Y +++ L+P AV + + + + G D+ + K+M
Sbjct: 533 LGACKIHNNMEIGE------YVSRYLFELQPRVAVSFVEMANIYASVGRWDEVAAMRKTM 586
Query: 461 QSN 463
+SN
Sbjct: 587 RSN 589
Score = 118 bits (296), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 74/255 (29%), Positives = 129/255 (50%), Gaps = 3/255 (1%)
Query: 194 TSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSM 253
+++ W + I G VN GN ++A L +Q++ + P+ F L CA++ +L + +
Sbjct: 15 STLTWWNSSIRGAVNQGNASKALALFHQLKLNGLQPNNFTFPFLSKACAKLSHLTNSQII 74
Query: 254 HSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYP 313
H+ ++KS + ++ + +V MY KCG ++ A +FD + +++ W +MI G++Q+G
Sbjct: 75 HTHVVKSPFYSDIYVQTAMVDMYVKCGKVDDAYNLFDKMPVRNIASWNAMIIGFSQIGSL 134
Query: 314 SEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSL 373
NLF + RP+ AT+ A SL K + + GL+++ V +
Sbjct: 135 DRVFNLFMGMRLVGTRPDAATVIGLTRAVISAKSLRFLKAVHAIGIETGLDADTSVSNTW 194
Query: 374 IHMFSKCGRINKAKEVFERVPD--KDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLK 431
I +SKCG + AK VF + + W+++I YA G A+ YK +G K
Sbjct: 195 IAAYSKCGELQLAKMVFHGIQKTARSSVSWNSLIACYAHFGKYVDAVK-SYKGLLCDGFK 253
Query: 432 PDAVVYTSILSACSH 446
PDA S+LS+C
Sbjct: 254 PDASTIISLLSSCQQ 268
>gi|15241714|ref|NP_198751.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171567|sp|Q9FLZ9.1|PP405_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g39350
gi|10177683|dbj|BAB11009.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332007040|gb|AED94423.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 677
Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust.
Identities = 204/587 (34%), Positives = 327/587 (55%), Gaps = 12/587 (2%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVH--GNSFTFPLVLKACANINSIWDGKRVHSHVLK 58
+IR G + + +S + M+ GV + +T+P V KA + S+ G VH +L+
Sbjct: 86 VIRMYVREGLYHDAISVFIRMVSEGVKCVPDGYTYPFVAKAAGELKSMKLGLVVHGRILR 145
Query: 59 VGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAI 118
F +D +VQ L+ MY +R V D M + R V+SWN++IS + R ++A+
Sbjct: 146 SWFGRDKYVQNALLAMYMNFGKVEMARDVFDVM--KNRDVISWNTMISGYYRNGYMNDAL 203
Query: 119 LVLKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKL---GLLNNEIPLANSVMSMY 175
++ M ++L +T VS++ C + + M V+KL L ++I + N++++MY
Sbjct: 204 MMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVKNALVNMY 263
Query: 176 AKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFL 235
K G+++EAR +FD + +++WT +I GY G+V A LC M+ V P+ V
Sbjct: 264 LKCGRMDEARFVFDRMERRDVITWTCMINGYTEDGDVENALELCRLMQFEGVRPNAVTIA 323
Query: 236 NLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEK 295
+L+ C + +H ++ ++ ++ L+SMY KC ++L RVF +
Sbjct: 324 SLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIETSLISMYAKCKRVDLCFRVFSGASKY 383
Query: 296 SVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIE 355
W+++I G Q S+A+ LFKR+ + V PN ATL + L A A L L + I
Sbjct: 384 HTGPWSAIIAGCVQNELVSDALGLFKRMRREDVEPNIATLNSLLPAYAALADLRQAMNIH 443
Query: 356 EYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVF----ERVPDKDLAVWSAMINGYAIH 411
Y+ G S+ T L+H++SKCG + A ++F E+ KD+ +W A+I+GY +H
Sbjct: 444 CYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGMH 503
Query: 412 GMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIE 471
G G AL +F +M G+ P+ + +TS L+ACSHSG+V++GL+ F+ M ++
Sbjct: 504 GDGHNALQVFMEMVR-SGVTPNEITFTSALNACSHSGLVEEGLTLFRFMLEHYKTLARSN 562
Query: 472 HYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTL 531
HY C+VDLLGRAGR D A I +P E + VW LL+AC+ H NV+LGE AA L L
Sbjct: 563 HYTCIVDLLGRAGRLDEAYNLITTIPFEPTSTVWGALLAACVTHENVQLGEMAANKLFEL 622
Query: 532 NPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEI 578
P +TGNY+L+AN++ + G WK+ R +M++ L K+PG S +EI
Sbjct: 623 EPENTGNYVLLANIYAALGRWKDMEKVRSMMENVGLRKKPGHSTIEI 669
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 135/492 (27%), Positives = 237/492 (48%), Gaps = 15/492 (3%)
Query: 33 FPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMP 92
+ +L A SI K +H HV+ G + + + L Y+ C +RK+ +EMP
Sbjct: 18 YQSLLNHFAATQSISKTKALHCHVI-TGGRVSGHILSTLSVTYALCGHITYARKLFEEMP 76
Query: 93 VRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSAS----TFVSVVSG--CSFR 146
S++S+N +I + R L +AI V M G++ FV+ +G S +
Sbjct: 77 --QSSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGYTYPFVAKAAGELKSMK 134
Query: 147 QGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGY 206
G+ +H + + + + N++++MY FGKV AR +FD + ++SW T+I GY
Sbjct: 135 LGLVVHGRILR-SWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMKNRDVISWNTMISGY 193
Query: 207 VNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNED 266
G +N+A + + M SV D ++++ C + +L + ++H L+ + ++
Sbjct: 194 YRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKI 253
Query: 267 PLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKT 326
+ N LV+MY KCG ++ AR VFD + + V WT MI GY + G A+ L + +
Sbjct: 254 EVKNALVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTEDGDVENALELCRLMQFE 313
Query: 327 SVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKA 386
VRPN T+A+ +S C + ++ GK + + V + S+ ++TSLI M++KC R++
Sbjct: 314 GVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIETSLISMYAKCKRVDLC 373
Query: 387 KEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSH 446
VF WSA+I G + + AL LF +M+ E ++P+ S+L A +
Sbjct: 374 FRVFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRR-EDVEPNIATLNSLLPAYAA 432
Query: 447 SGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKT---IHEMPVEVQAQ 503
+ ++ + + G S++ LV + + G + A K I E
Sbjct: 433 LADLRQAMNIHCYL-TKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVV 491
Query: 504 VWAPLLSACMKH 515
+W L+S H
Sbjct: 492 LWGALISGYGMH 503
>gi|449448586|ref|XP_004142047.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Cucumis sativus]
Length = 1037
Score = 377 bits (967), Expect = e-101, Method: Compositional matrix adjust.
Identities = 204/622 (32%), Positives = 351/622 (56%), Gaps = 8/622 (1%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+I G + L ++ M + + + T +L ACA++ ++ G ++HSH +K G
Sbjct: 333 LISGLVQQGFSDRALELFTKMQRDCLKPDCITVASLLSACASVGALHKGMQLHSHAIKAG 392
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
D ++ L+D+YSKC+D ++ K + ++V WN ++ A+ + ++ +
Sbjct: 393 MSADIILEGSLLDLYSKCADVETAHKFF--LTTETENIVLWNVMLVAYGQLDNLSDSFEI 450
Query: 121 LKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
++M + G+ + T+ S++ C+ G +H V K G N + + + ++ MYA
Sbjct: 451 FRQMQMEGMIPNQFTYPSILRTCTSLGALYLGEQIHTHVIKTGFQLN-VYVCSVLIDMYA 509
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K+G++ A I + E +VSWT +I GYV +EA L +M + D + F +
Sbjct: 510 KYGQLALALRILRRLPEDDVVSWTAMIAGYVQHDMFSEALQLFEEMEYRGIQFDNIGFAS 569
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
I CA + L +H+ +G+ + ++N L+S+Y +CG ++ A F+ + +K+
Sbjct: 570 AISACAGIRALRQGQQIHAQSYAAGFGADLSINNALISLYARCGRIQEAYLAFEKIGDKN 629
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEE 356
W S++ G AQ GY EA+ +F R+L+T N T + +SA A L ++ +G++I
Sbjct: 630 NISWNSLVSGLAQSGYFEEALQVFVRMLRTEAEVNMFTYGSAISAAASLANIKQGQQIHS 689
Query: 357 YIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQ 416
++ G +S R+V SLI +++K G I+ A F + ++++ W+AMI GY+ HG G +
Sbjct: 690 MVLKTGYDSEREVSNSLISLYAKSGSISDAWREFNDMSERNVISWNAMITGYSQHGCGME 749
Query: 417 ALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCL 476
AL LF +M+ V G+ P+ V + +LSACSH G+V +GL +F+SM + P EHY+C+
Sbjct: 750 ALRLFEEMK-VCGIMPNHVTFVGVLSACSHIGLVKEGLDYFESMFKIHDLVPKSEHYVCV 808
Query: 477 VDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGST 536
VDLLGRAG+ D A++ I EMP+ A +W LLSAC+ H N+E+GE AA +LL L P +
Sbjct: 809 VDLLGRAGQLDRAMEYIKEMPIPADAMIWRTLLSACVIHKNIEIGERAAHHLLELEPEDS 868
Query: 537 GNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSV 596
Y+L++N++ + W +R LM DR + KEPG S +E+ +V F AGD+ H L+
Sbjct: 869 ATYVLISNIYAVSRQWIHRDWSRKLMKDRGVKKEPGRSWIEVKNAVHAFYAGDKLHPLTN 928
Query: 597 DIRKTLKELHIKLLEAGYIAEA 618
I + + L+ + E GY+ ++
Sbjct: 929 QIYEYIGHLNRRTSEIGYVQDS 950
Score = 239 bits (610), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 151/488 (30%), Positives = 257/488 (52%), Gaps = 22/488 (4%)
Query: 13 ETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDG-KRVHSHVLKVGFQQDAFVQTGL 71
+ + ML G+ N +TF VLKAC + ++ K+VHS GF V L
Sbjct: 142 QVFCLFRRMLAEGITPNGYTFAGVLKACVGGDIAFNYVKQVHSRTFYYGFDSSPLVANLL 201
Query: 72 IDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEM------- 124
ID+YSK S++KV + + ++ +V+W ++IS S+ L +EAIL+ +M
Sbjct: 202 IDLYSKNGYIESAKKVFN--CICMKDIVTWVAMISGLSQNGLEEEAILLFCDMHASEIFP 259
Query: 125 --WVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVN 182
+VL LSAST + + F G +HC V K G ++E + N ++++Y++ K+
Sbjct: 260 TPYVLSSVLSASTKIQL-----FELGEQLHCLVIKWGF-HSETYVCNGLVALYSRSRKLI 313
Query: 183 EARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCA 242
A IF + VS+ ++I G V G + A L +M+R + PD + +L+ CA
Sbjct: 314 SAERIFSTMNSRDGVSYNSLISGLVQQGFSDRALELFTKMQRDCLKPDCITVASLLSACA 373
Query: 243 QVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTS 302
VG L + +HS +K+G + + L+ L+ +Y+KC D+E A + F +++ LW
Sbjct: 374 SVGALHKGMQLHSHAIKAGMSADIILEGSLLDLYSKCADVETAHKFFLTTETENIVLWNV 433
Query: 303 MIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNG 362
M+ Y QL S++ +F+++ + PN+ T + L C LG+L G++I +++ G
Sbjct: 434 MLVAYGQLDNLSDSFEIFRQMQMEGMIPNQFTYPSILRTCTSLGALYLGEQIHTHVIKTG 493
Query: 363 LESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFY 422
+ N V + LI M++K G++ A + R+P+ D+ W+AMI GY H M +AL LF
Sbjct: 494 FQLNVYVCSVLIDMYAKYGQLALALRILRRLPEDDVVSWTAMIAGYVQHDMFSEALQLFE 553
Query: 423 KMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFF-KSMQSNFGIEPSIEHYLCLVDLLG 481
+M++ G++ D + + S +SAC+ + G +S + FG + SI + L+ L
Sbjct: 554 EMEY-RGIQFDNIGFASAISACAGIRALRQGQQIHAQSYAAGFGADLSINN--ALISLYA 610
Query: 482 RAGRFDLA 489
R GR A
Sbjct: 611 RCGRIQEA 618
Score = 203 bits (516), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 136/519 (26%), Positives = 257/519 (49%), Gaps = 10/519 (1%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI + NG EE + + M + + + VL A I G+++H V+K G
Sbjct: 232 MISGLSQNGLEEEAILLFCDMHASEIFPTPYVLSSVLSASTKIQLFELGEQLHCLVIKWG 291
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F + +V GL+ +YS+ +S+ ++ M R VS+NS+IS + +D A+ +
Sbjct: 292 FHSETYVCNGLVALYSRSRKLISAERIFSTMNS--RDGVSYNSLISGLVQQGFSDRALEL 349
Query: 121 LKEMWVLGLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
+M L+ T S++S C + +G+ +H K G ++ +I L S++ +Y+
Sbjct: 350 FTKMQRDCLKPDCITVASLLSACASVGALHKGMQLHSHAIKAG-MSADIILEGSLLDLYS 408
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K V A F +IV W ++ Y + N++++F + QM+ + P+ + +
Sbjct: 409 KCADVETAHKFFLTTETENIVLWNVMLVAYGQLDNLSDSFEIFRQMQMEGMIPNQFTYPS 468
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
++ C +G L+L +H+ ++K+G+ + ++L+ MY K G L LA R+ + E
Sbjct: 469 ILRTCTSLGALYLGEQIHTHVIKTGFQLNVYVCSVLIDMYAKYGQLALALRILRRLPEDD 528
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEE 356
V WT+MI GY Q SEA+ LF+ + ++ + A+ +SACA + +L +G++I
Sbjct: 529 VVSWTAMIAGYVQHDMFSEALQLFEEMEYRGIQFDNIGFASAISACAGIRALRQGQQIHA 588
Query: 357 YIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQ 416
G ++ + +LI ++++CGRI +A FE++ DK+ W+++++G A G ++
Sbjct: 589 QSYAAGFGADLSINNALISLYARCGRIQEAYLAFEKIGDKNNISWNSLVSGLAQSGYFEE 648
Query: 417 ALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCL 476
AL +F +M E + + Y S +SA + + G SM G + E L
Sbjct: 649 ALQVFVRMLRTEA-EVNMFTYGSAISAAASLANIKQGQQ-IHSMVLKTGYDSEREVSNSL 706
Query: 477 VDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKH 515
+ L ++G A + ++M E W +++ +H
Sbjct: 707 ISLYAKSGSISDAWREFNDMS-ERNVISWNAMITGYSQH 744
Score = 195 bits (496), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 133/529 (25%), Positives = 256/529 (48%), Gaps = 26/529 (4%)
Query: 5 STNNGSFEET-----------LSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVH 53
+TN+ SF++T + + M + GV N + +L+ C S+++ R+H
Sbjct: 22 ATNSHSFDQTTLHMEQGKSKRIQLMNFMEERGVRSNYQNYLWLLEGCLTSGSLFETMRLH 81
Query: 54 SHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACL 113
+ K GF + + L+D Y + D + KV DE RSV SWN +I
Sbjct: 82 CRISKSGFDGEPLLIDSLVDNYFRHGDQHGAVKVFDENSN--RSVFSWNKMIHVFVAQKS 139
Query: 114 NDEAILVLKEMWVLGLELSASTFVSVVSGC-----SFRQGISMHCCVYKLGLLNNEIPLA 168
N + + + M G+ + TF V+ C +F +H + G ++ + +A
Sbjct: 140 NFQVFCLFRRMLAEGITPNGYTFAGVLKACVGGDIAFNYVKQVHSRTFYYGFDSSPL-VA 198
Query: 169 NSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVT 228
N ++ +Y+K G + A+ +F+ I IV+W +I G G EA L M +
Sbjct: 199 NLLIDLYSKNGYIESAKKVFNCICMKDIVTWVAMISGLSQNGLEEEAILLFCDMHASEIF 258
Query: 229 PDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRV 288
P V +++ ++ L +H L++K G+++E + N LV++Y++ L A R+
Sbjct: 259 PTPYVLSSVLSASTKIQLFELGEQLHCLVIKWGFHSETYVCNGLVALYSRSRKLISAERI 318
Query: 289 FDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSL 348
F + + + S+I G Q G+ A+ LF ++ + ++P+ T+A+ LSACA +G+L
Sbjct: 319 FSTMNSRDGVSYNSLISGLVQQGFSDRALELFTKMQRDCLKPDCITVASLLSACASVGAL 378
Query: 349 SKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGY 408
KG ++ + + G+ ++ ++ SL+ ++SKC + A + F +++ +W+ M+ Y
Sbjct: 379 HKGMQLHSHAIKAGMSADIILEGSLLDLYSKCADVETAHKFFLTTETENIVLWNVMLVAY 438
Query: 409 AIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEP 468
+ +F +MQ +EG+ P+ Y SIL C+ G + G + G +
Sbjct: 439 GQLDNLSDSFEIFRQMQ-MEGMIPNQFTYPSILRTCTSLGALYLGEQIHTHVIKT-GFQL 496
Query: 469 SIEHYLC--LVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKH 515
++ Y+C L+D+ + G+ LAL+ + +P E W +++ ++H
Sbjct: 497 NV--YVCSVLIDMYAKYGQLALALRILRRLP-EDDVVSWTAMIAGYVQH 542
>gi|225445812|ref|XP_002275298.1| PREDICTED: pentatricopeptide repeat-containing protein At4g30700
[Vitis vinifera]
Length = 781
Score = 377 bits (967), Expect = e-101, Method: Compositional matrix adjust.
Identities = 215/622 (34%), Positives = 346/622 (55%), Gaps = 12/622 (1%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQ-TGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKV 59
+IR + N S +S Y+ + + T + ++FT+ V+ +++ +
Sbjct: 79 LIRAFSLNNSPSSAVSLYTHLRKSTPLEPDNFTYAFVISGASSLGLGLLLHAHS---IVA 135
Query: 60 GFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAIL 119
GF D FV + ++ Y K S ++RKV D M R V WN+++S + DEAIL
Sbjct: 136 GFGSDLFVGSAIVACYFKFSRVAAARKVFDGM--LERDTVLWNTMVSGLVKNSCFDEAIL 193
Query: 120 VLKEMWVLGLELSASTFVSVVSGCSFRQ----GISMHCCVYKLGLLNNEIPLANSVMSMY 175
+ +M G+ ++T +V+ G + Q G+ + C K+G ++ + + +Y
Sbjct: 194 IFGDMVKGGIGFDSTTVAAVLPGVAELQDLALGMGIQCLAMKVGF-HSHAYVITGLACLY 252
Query: 176 AKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFL 235
+K G++ AR +F +IG+ +VS+ +I GY + L ++ + +
Sbjct: 253 SKCGEIETARLLFGQIGQPDLVSYNAMISGYTCNNETESSVRLFKELLVSGEKVNSSSIV 312
Query: 236 NLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEK 295
LI G+L L +H KSG + + L ++Y++ ++E AR +FD EK
Sbjct: 313 GLIPVFFPFGHLHLTRCIHGFCTKSGVVSNSSVSTALTTVYSRLNEIESARLLFDESSEK 372
Query: 296 SVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIE 355
S+ W +MI GYAQ G +A++LF+ + K VRPN T+ + LSACA+LG+LS GK +
Sbjct: 373 SLASWNAMISGYAQNGLTEKAISLFQEMQKCEVRPNPVTVTSILSACAQLGALSLGKWVH 432
Query: 356 EYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGD 415
+ I ESN V T+LI M++KCG I +A+ +F +P+K+ W+AMI+GY +HG G
Sbjct: 433 DLINRESFESNIFVSTALIDMYAKCGSITEAQRLFSMMPEKNAVTWNAMISGYGLHGYGH 492
Query: 416 QALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLC 475
+ALNLF +M H + P V + S+L ACSH+G+V +G F+SM + G EP EHY C
Sbjct: 493 EALNLFNEMLHSR-VSPTGVTFLSVLYACSHAGLVREGDEIFRSMVHDHGFEPLPEHYAC 551
Query: 476 LVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGS 535
+VDLLGRAG D AL I +MPVE VW LL ACM H + L A+ L L+P +
Sbjct: 552 MVDLLGRAGNLDKALDFIRKMPVEPGPPVWGALLGACMIHKDANLARLASDKLFELDPQN 611
Query: 536 TGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLS 595
G Y+L++N++++ + EAA+ RG++ R+L K PG + +E+ ++ +F +GD+SH +
Sbjct: 612 VGYYVLLSNIYSAGQNYPEAASVRGVVKRRKLAKTPGCTLIEVANTLHIFTSGDQSHPQA 671
Query: 596 VDIRKTLKELHIKLLEAGYIAE 617
I L++L K+ EAG+ E
Sbjct: 672 TAIYAMLEKLTGKMREAGFQTE 693
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 92/200 (46%), Gaps = 15/200 (7%)
Query: 237 LILGCAQVGNLFLAL-----------SMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELA 285
L G A NLFL L H+ ++ +G +N+ L + ++ A
Sbjct: 2 LYRGIASTRNLFLTLINRVSTLHQLNQTHAQIILNGLHNDLVTVTKLTHKLSHLKAIDQA 61
Query: 286 RRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLK-TSVRPNEATLATTLSACAE 344
+F + +FL+ +I ++ PS AV+L+ L K T + P+ T A +S +
Sbjct: 62 SLLFSTIPNPDLFLYNVLIRAFSLNNSPSSAVSLYTHLRKSTPLEPDNFTYAFVISGASS 121
Query: 345 LGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAM 404
LG ++ G S+ V ++++ + K R+ A++VF+ + ++D +W+ M
Sbjct: 122 LGLGLLLHAHS---IVAGFGSDLFVGSAIVACYFKFSRVAAARKVFDGMLERDTVLWNTM 178
Query: 405 INGYAIHGMGDQALNLFYKM 424
++G + D+A+ +F M
Sbjct: 179 VSGLVKNSCFDEAILIFGDM 198
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/103 (23%), Positives = 53/103 (51%)
Query: 339 LSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDL 398
L+ + +L + + I+LNGL ++ T L H S I++A +F +P+ DL
Sbjct: 14 LTLINRVSTLHQLNQTHAQIILNGLHNDLVTVTKLTHKLSHLKAIDQASLLFSTIPNPDL 73
Query: 399 AVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSIL 441
+++ +I ++++ A++L+ ++ L+PD Y ++
Sbjct: 74 FLYNVLIRAFSLNNSPSSAVSLYTHLRKSTPLEPDNFTYAFVI 116
>gi|359488803|ref|XP_002272525.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950 [Vitis vinifera]
Length = 1291
Score = 377 bits (967), Expect = e-101, Method: Compositional matrix adjust.
Identities = 210/628 (33%), Positives = 346/628 (55%), Gaps = 12/628 (1%)
Query: 2 IRNSTNNGSFEETLSTYSSMLQT-GVHGNSFTFPLVLKACANINSIWDGKRVHSHVLK-- 58
+R+ +EETL + M+ T G ++FT P+ LKACA + + GK +H K
Sbjct: 74 LRSYCREKQWEETLRLFHLMICTAGEAPDNFTIPIALKACAGLRMLELGKVIHGFAKKND 133
Query: 59 -VGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEA 117
+G D FV + L+++YSKC + KV +E + V W S+++ + + +EA
Sbjct: 134 EIG--SDMFVGSALVELYSKCGQMGEALKVFEEF--QRPDTVLWTSMVTGYQQNNDPEEA 189
Query: 118 ILVLKEMWVLG-LELSASTFVSVVSGCSFRQGISMHCCVYKLGL---LNNEIPLANSVMS 173
+ + +M ++ + L T VSVVS C+ + CV+ L + + ++PL NS+++
Sbjct: 190 LALFSQMVMMDCVVLDPVTLVSVVSACAQLLNVKAGSCVHGLVIRREFDGDLPLVNSLLN 249
Query: 174 MYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVV 233
+YAK G A ++F ++ E ++SW+T+I Y N NEA L ++M P+ V
Sbjct: 250 LYAKTGCEKIAANLFSKMPEKDVISWSTMIACYANNEAANEALNLFHEMIEKRFEPNSVT 309
Query: 234 FLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVL 293
++ + CA NL +H + + G+ + + L+ MY KC + A +F +
Sbjct: 310 VVSALQACAVSRNLEEGKKIHKIAVWKGFELDFSVSTALIDMYMKCSCPDEAVDLFQRLP 369
Query: 294 EKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKE 353
+K V W +++ GYAQ G +++ +F+ +L ++P+ + L+A +ELG +
Sbjct: 370 KKDVVSWVALLSGYAQNGMAYKSMGVFRNMLSDGIQPDAVAVVKILAASSELGIFQQALC 429
Query: 354 IEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGM 413
+ Y+V +G SN V SLI ++SKCG + A ++F+ + +D+ +WS+MI Y IHG
Sbjct: 430 LHGYVVRSGFNSNVFVGASLIELYSKCGSLGDAVKLFKGMIVRDVVIWSSMIAAYGIHGR 489
Query: 414 GDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHY 473
G +AL +F +M ++P+ V + SILSACSH+G+V++GL F M ++ + P EH+
Sbjct: 490 GGEALEIFDQMVKNSTVRPNNVTFLSILSACSHAGLVEEGLKIFDRMVHDYQLRPDSEHF 549
Query: 474 LCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNP 533
+VDLLGR G+ A+ I+ MP+ VW LL AC HHN+E+GE AAKNL L+P
Sbjct: 550 GIMVDLLGRIGQLGKAMDIINRMPIPAGPHVWGALLGACRIHHNIEMGEAAAKNLFWLDP 609
Query: 534 GSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHH 593
G YIL++N++ G W A R + +R L K G S VE+ G V F+A DR H
Sbjct: 610 SHAGYYILLSNIYAVDGKWDNVAELRTRIKERGLKKMFGQSMVEVRGGVHSFLASDRFHP 669
Query: 594 LSVDIRKTLKELHIKLLEAGYIAEADIV 621
S I + L++L ++ + YI + D +
Sbjct: 670 DSQKIYELLRKLEAQMGKEVYIPDLDFL 697
Score = 318 bits (816), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 169/470 (35%), Positives = 255/470 (54%), Gaps = 2/470 (0%)
Query: 152 HCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGN 211
H ++ GL + L + MY F +++ A +F++I W +I G+ G
Sbjct: 740 HAKIFAYGLQYDSRILTKFAI-MYVSFNRIDAASIVFEDIPNPCSFLWNVMIRGFATDGR 798
Query: 212 VNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNL 271
+ L ++M + PD F + CA + +L +H L+ G +N+ +D
Sbjct: 799 FLSSLELYSKMMEKGLKPDKFAFPFALKSCAGLSDLQRGKVIHQHLVCCGCSNDLFVDAA 858
Query: 272 LVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPN 331
LV MY KCGD+E AR VFD + + + WTSMI GYA GY SE + F + + V PN
Sbjct: 859 LVDMYAKCGDIEAARLVFDKMAVRDLVSWTSMISGYAHNGYNSETLGFFDLMRSSGVIPN 918
Query: 332 EATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFE 391
++ + L AC LG+L KG+ Y++ G E + V T+++ M+SKCG ++ A+ +F+
Sbjct: 919 RVSILSVLLACGNLGALRKGEWFHSYVIQTGFEFDILVATAIMDMYSKCGSLDLARCLFD 978
Query: 392 RVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVD 451
KDL WSAMI Y IHG G +A++LF +M G++P V +T +LSACSHSG+++
Sbjct: 979 ETAGKDLVCWSAMIASYGIHGHGRKAIDLFDQMVKA-GVRPSHVTFTCVLSACSHSGLLE 1037
Query: 452 DGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSA 511
+G +F+ M F I + +Y C+VDLLGRAG+ A+ I MPVE A +W LL A
Sbjct: 1038 EGKMYFQLMTEEFVIARKLSNYACMVDLLGRAGQLSEAVDLIENMPVEPDASIWGSLLGA 1097
Query: 512 CMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEP 571
C H+N++L E A +L L+P G ++L++N++ + W E R +M R K
Sbjct: 1098 CRIHNNLDLAEKIADHLFHLDPVHAGYHVLLSNIYAAKSRWNEVEKVRKMMARRGANKIQ 1157
Query: 572 GWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKELHIKLLEAGYIAEADIV 621
G+S VE D V F GDRSH + L+EL + GY+ D V
Sbjct: 1158 GFSLVEYDNQVHKFGVGDRSHPQWEKLYAKLEELAAPMKHLGYVPLTDFV 1207
Score = 223 bits (568), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 140/482 (29%), Positives = 253/482 (52%), Gaps = 14/482 (2%)
Query: 36 VLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRL 95
+ +AC N S+ ++HS V K G D F T L +Y+KC+ ++RKV DE P
Sbjct: 10 LFQACNNGRSV---SQLHSQVFKTGILHDTFFATKLNSLYAKCASLQAARKVFDETP--H 64
Query: 96 RSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSV-VSGCSFRQGISMHCC 154
+V WNS + ++ R +E + + M E + + + + C+ + + +
Sbjct: 65 PNVHLWNSTLRSYCREKQWEETLRLFHLMICTAGEAPDNFTIPIALKACAGLRMLELGKV 124
Query: 155 VYKLGLLNNEIP----LANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVG 210
++ N+EI + ++++ +Y+K G++ EA +F+E V WT+++ GY
Sbjct: 125 IHGFAKKNDEIGSDMFVGSALVELYSKCGQMGEALKVFEEFQRPDTVLWTSMVTGYQQNN 184
Query: 211 NVNEAFGLCNQMRRMS-VTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLD 269
+ EA L +QM M V D V ++++ CAQ+ N+ +H L+++ ++ + PL
Sbjct: 185 DPEEALALFSQMVMMDCVVLDPVTLVSVVSACAQLLNVKAGSCVHGLVIRREFDGDLPLV 244
Query: 270 NLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVR 329
N L+++Y K G ++A +F + EK V W++MI YA +EA+NLF +++
Sbjct: 245 NSLLNLYAKTGCEKIAANLFSKMPEKDVISWSTMIACYANNEAANEALNLFHEMIEKRFE 304
Query: 330 PNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEV 389
PN T+ + L ACA +L +GK+I + V G E + V T+LI M+ KC ++A ++
Sbjct: 305 PNSVTVVSALQACAVSRNLEEGKKIHKIAVWKGFELDFSVSTALIDMYMKCSCPDEAVDL 364
Query: 390 FERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGM 449
F+R+P KD+ W A+++GYA +GM +++ +F M +G++PDAV IL+A S G+
Sbjct: 365 FQRLPKKDVVSWVALLSGYAQNGMAYKSMGVFRNMLS-DGIQPDAVAVVKILAASSELGI 423
Query: 450 VDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLL 509
L + + G ++ L++L + G A+K M V +W+ ++
Sbjct: 424 FQQALCLHGYVVRS-GFNSNVFVGASLIELYSKCGSLGDAVKLFKGMIVR-DVVIWSSMI 481
Query: 510 SA 511
+A
Sbjct: 482 AA 483
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 118/425 (27%), Positives = 203/425 (47%), Gaps = 44/425 (10%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MIR +G F +L YS M++ G+ + F FP LK+CA ++ + GK +H H++ G
Sbjct: 789 MIRGFATDGRFLSSLELYSKMMEKGLKPDKFAFPFALKSCAGLSDLQRGKVIHQHLVCCG 848
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
D FV L+DMY+KC D ++R V D+M V R +VSW S+IS ++ N E +
Sbjct: 849 CSNDLFVDAALVDMYAKCGDIEAARLVFDKMAV--RDLVSWTSMISGYAHNGYNSETLGF 906
Query: 121 LKEMWVLGLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
M G+ + + +SV+ C + R+G H V + G +I +A ++M MY+
Sbjct: 907 FDLMRSSGVIPNRVSILSVLLACGNLGALRKGEWFHSYVIQTG-FEFDILVATAIMDMYS 965
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K G ++ AR +FDE +V W+ +I Y G+ +A L +QM + V P V F
Sbjct: 966 KCGSLDLARCLFDETAGKDLVCWSAMIASYGIHGHGRKAIDLFDQMVKAGVRPSHVTFTC 1025
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
++ C+ HS LL+ G MY +L F V+ +
Sbjct: 1026 VLSACS-----------HSGLLEEG------------KMY-----FQLMTEEF--VIARK 1055
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEE 356
+ + M+ + G SEAV+L + + V P+ + + L AC +L ++I +
Sbjct: 1056 LSNYACMVDLLGRAGQLSEAVDLIENM---PVEPDASIWGSLLGACRIHNNLDLAEKIAD 1112
Query: 357 YIV-LNGLESNRQVQTSLIHMF-SKCGRINKAKEVFERVPDKDLAVWSAMINGYAIH--G 412
++ L+ + + V S I+ S+ + K +++ R + +S + +H G
Sbjct: 1113 HLFHLDPVHAGYHVLLSNIYAAKSRWNEVEKVRKMMARRGANKIQGFSLVEYDNQVHKFG 1172
Query: 413 MGDQA 417
+GD++
Sbjct: 1173 VGDRS 1177
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 92/337 (27%), Positives = 156/337 (46%), Gaps = 22/337 (6%)
Query: 253 MHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGY 312
+HS + K+G ++ L S+Y KC L+ AR+VFD +V LW S + Y +
Sbjct: 23 LHSQVFKTGILHDTFFATKLNSLYAKCASLQAARKVFDETPHPNVHLWNSTLRSYCREKQ 82
Query: 313 PSEAVNLFKRLLKTSVR-PNEATLATTLSACAELGSLSKGKEIEEYIVLNG-LESNRQVQ 370
E + LF ++ T+ P+ T+ L ACA L L GK I + N + S+ V
Sbjct: 83 WEETLRLFHLMICTAGEAPDNFTIPIALKACAGLRMLELGKVIHGFAKKNDEIGSDMFVG 142
Query: 371 TSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGL 430
++L+ ++SKCG++ +A +VFE D +W++M+ GY + ++AL LF +M ++ +
Sbjct: 143 SALVELYSKCGQMGEALKVFEEFQRPDTVLWTSMVTGYQQNNDPEEALALFSQMVMMDCV 202
Query: 431 KPDAVVYTSILSACSH-----SGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGR 485
D V S++SAC+ +G GL + + + S L++L + G
Sbjct: 203 VLDPVTLVSVVSACAQLLNVKAGSCVHGLVIRREFDGDLPLVNS------LLNLYAKTGC 256
Query: 486 FDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANL 545
+A +MP E W+ ++ AC ++ AA L L N
Sbjct: 257 EKIAANLFSKMP-EKDVISWSTMI-ACYANNE------AANEALNLFHEMIEKR-FEPNS 307
Query: 546 FTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSV 582
T + A +R L + +++ K W E+D SV
Sbjct: 308 VTVVSALQACAVSRNLEEGKKIHKIAVWKGFELDFSV 344
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 70/250 (28%), Positives = 131/250 (52%), Gaps = 8/250 (3%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI NN + E L+ + M++ NS T L+ACA ++ +GK++H + G
Sbjct: 278 MIACYANNEAANEALNLFHEMIEKRFEPNSVTVVSALQACAVSRNLEEGKKIHKIAVWKG 337
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F+ D V T LIDMY KCS + + +P + VVSW +++S +++ + +++ V
Sbjct: 338 FELDFSVSTALIDMYMKCSCPDEAVDLFQRLPK--KDVVSWVALLSGYAQNGMAYKSMGV 395
Query: 121 LKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
+ M G++ A V +++ S F+Q + +H V + G N+ + + S++ +Y+
Sbjct: 396 FRNMLSDGIQPDAVAVVKILAASSELGIFQQALCLHGYVVRSG-FNSNVFVGASLIELYS 454
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQM-RRMSVTPDLVVFL 235
K G + +A +F + +V W+++I Y G EA + +QM + +V P+ V FL
Sbjct: 455 KCGSLGDAVKLFKGMIVRDVVIWSSMIAAYGIHGRGGEALEIFDQMVKNSTVRPNNVTFL 514
Query: 236 NLILGCAQVG 245
+++ C+ G
Sbjct: 515 SILSACSHAG 524
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 104/476 (21%), Positives = 194/476 (40%), Gaps = 56/476 (11%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
++ NG +++ + +ML G+ ++ +L A + + +H +V++ G
Sbjct: 379 LLSGYAQNGMAYKSMGVFRNMLSDGIQPDAVAVVKILAASSELGIFQQALCLHGYVVRSG 438
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F + FV LI++YSKC + K+ M VR VV W+S+I+A+ EA+ +
Sbjct: 439 FNSNVFVGASLIELYSKCGSLGDAVKLFKGMIVR--DVVIWSSMIAAYGIHGRGGEALEI 496
Query: 121 LKEMWVLG-LELSASTFVSVVSGCSFRQGISMHCCVYKLGLLNNEI-PLANSVMSMYAKF 178
+M + + TF+S++S CS + ++ + + ++ P + M
Sbjct: 497 FDQMVKNSTVRPNNVTFLSILSACSHAGLVEEGLKIFDRMVHDYQLRPDSEHFGIMVDLL 556
Query: 179 GKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLI 238
G++ + D I I + + G + G C + N+
Sbjct: 557 GRIGQLGKAMDIINRMPIPAGPHVWGALL---------GACR------------IHHNIE 595
Query: 239 LGCAQVGNLFLALSMHS---LLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLE- 294
+G A NLF H+ +LL + Y + DN+ + T+ + L + +++E
Sbjct: 596 MGEAAAKNLFWLDPSHAGYYILLSNIYAVDGKWDNV-AELRTRIKERGLKKMFGQSMVEV 654
Query: 295 ---------------KSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTS--------VRPN 331
S ++ + AQ+G +L L T ++
Sbjct: 655 RGGVHSFLASDRFHPDSQKIYELLRKLEAQMGKEVYIPDLDFLLHDTGAVLQFWQRIKAT 714
Query: 332 EATLATTLSACAE--LGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEV 389
E+ T SA + S K+ I GL+ + ++ T M+ RI+ A V
Sbjct: 715 ESKYKTIGSAPGTDTISCFSCLKKTHAKIFAYGLQYDSRILTKFAIMYVSFNRIDAASIV 774
Query: 390 FERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACS 445
FE +P+ +W+ MI G+A G +L L+ KM +GLKPD + L +C+
Sbjct: 775 FEDIPNPCSFLWNVMIRGFATDGRFLSSLELYSKMME-KGLKPDKFAFPFALKSCA 829
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/186 (21%), Positives = 78/186 (41%), Gaps = 4/186 (2%)
Query: 334 TLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERV 393
L AC S+S ++ + G+ + T L +++KC + A++VF+
Sbjct: 6 VLVDLFQACNNGRSVS---QLHSQVFKTGILHDTFFATKLNSLYAKCASLQAARKVFDET 62
Query: 394 PDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDG 453
P ++ +W++ + Y ++ L LF+ M G PD L AC+ M++ G
Sbjct: 63 PHPNVHLWNSTLRSYCREKQWEETLRLFHLMICTAGEAPDNFTIPIALKACAGLRMLELG 122
Query: 454 LSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACM 513
+ N I + LV+L + G+ ALK E +W +++
Sbjct: 123 KVIHGFAKKNDEIGSDMFVGSALVELYSKCGQMGEALKVFEEFQ-RPDTVLWTSMVTGYQ 181
Query: 514 KHHNVE 519
++++ E
Sbjct: 182 QNNDPE 187
>gi|297805814|ref|XP_002870791.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297316627|gb|EFH47050.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 674
Score = 376 bits (966), Expect = e-101, Method: Compositional matrix adjust.
Identities = 201/587 (34%), Positives = 326/587 (55%), Gaps = 12/587 (2%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVH--GNSFTFPLVLKACANINSIWDGKRVHSHVLK 58
+IR +G + + ++ + M+ G+ + +T+P V KA + SI G +H +L+
Sbjct: 86 VIRMYVRDGLYHDAINVFIRMVSEGIKCVPDGYTYPFVAKAAGELKSISLGLVIHGRILR 145
Query: 59 VGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAI 118
F D +VQ L+ MY +R V D M + R V+SWN++IS + R ++A+
Sbjct: 146 SWFGMDKYVQNALLAMYMNFGRVEMARNVFDVM--KNRDVISWNTMISGYYRNGYMNDAL 203
Query: 119 LVLKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKL---GLLNNEIPLANSVMSMY 175
++ M G++ +T VS++ C +G+ M V+KL L ++I + N++++MY
Sbjct: 204 MMFDWMVNEGVDPDHATIVSMLPVCGHLKGLEMGRNVHKLVEEKRLGDKIEVKNALVNMY 263
Query: 176 AKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFL 235
K G+++EAR +F + +++WT +I GY+ G+V A LC M+ V P+ V
Sbjct: 264 LKCGRMDEARFVFGRMERRDVITWTCMINGYIEDGDVENALELCRLMQFEGVRPNAVTIA 323
Query: 236 NLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEK 295
+L+ C L +H ++ ++ ++ L+SMY KC ++L RVF
Sbjct: 324 SLVSACGDALKLNDGKCLHGWAIRQKVCSDIIIETSLISMYAKCKHIDLCFRVFSGASRN 383
Query: 296 SVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIE 355
W+++I G Q +A++LFKR+ + V PN ATL + L A A L L + I
Sbjct: 384 HTGPWSAIIAGCVQNELVRDALDLFKRMRREDVEPNIATLNSLLPAYATLADLRQTMNIH 443
Query: 356 EYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVF----ERVPDKDLAVWSAMINGYAIH 411
Y+ G S+ T L+H++SKCG + A ++F E+ KD+ +W A+I+GY +H
Sbjct: 444 CYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGMH 503
Query: 412 GMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIE 471
G G AL +F +M G+ P+ + +TS L+ACSHSG+V++GL+ F M ++
Sbjct: 504 GDGHNALQVFMEMVR-SGVTPNEITFTSALNACSHSGLVEEGLTLFSFMLEHYKTLARSN 562
Query: 472 HYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTL 531
HY C+VDLLGRAGR D A I +P E + +W LL+AC+ H NV+LGE AA L L
Sbjct: 563 HYTCIVDLLGRAGRLDEAYNLITTIPFEPTSTIWGALLAACVTHENVQLGEMAANKLFEL 622
Query: 532 NPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEI 578
P +TGNY+L+AN++ + G WK+ R +M++ L K+PG S +EI
Sbjct: 623 EPENTGNYVLLANIYAALGRWKDMEKVRNMMENVGLRKKPGHSTIEI 669
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 135/492 (27%), Positives = 236/492 (47%), Gaps = 15/492 (3%)
Query: 33 FPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMP 92
+ +L A SI K +H HV+ G + + + L Y+ C +RK+ DEMP
Sbjct: 18 YQSLLNHYAATQSISKTKALHCHVI-TGGRVSGHILSTLSVTYALCGHIAYARKLFDEMP 76
Query: 93 VRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSAS----TFVSVVSG--CSFR 146
S++S+N +I + R L +AI V M G++ FV+ +G S
Sbjct: 77 --QSSLLSYNIVIRMYVRDGLYHDAINVFIRMVSEGIKCVPDGYTYPFVAKAAGELKSIS 134
Query: 147 QGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGY 206
G+ +H + + + + N++++MY FG+V AR++FD + ++SW T+I GY
Sbjct: 135 LGLVIHGRILR-SWFGMDKYVQNALLAMYMNFGRVEMARNVFDVMKNRDVISWNTMISGY 193
Query: 207 VNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNED 266
G +N+A + + M V PD ++++ C + L + ++H L+ + ++
Sbjct: 194 YRNGYMNDALMMFDWMVNEGVDPDHATIVSMLPVCGHLKGLEMGRNVHKLVEEKRLGDKI 253
Query: 267 PLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKT 326
+ N LV+MY KCG ++ AR VF + + V WT MI GY + G A+ L + +
Sbjct: 254 EVKNALVNMYLKCGRMDEARFVFGRMERRDVITWTCMINGYIEDGDVENALELCRLMQFE 313
Query: 327 SVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKA 386
VRPN T+A+ +SAC + L+ GK + + + + S+ ++TSLI M++KC I+
Sbjct: 314 GVRPNAVTIASLVSACGDALKLNDGKCLHGWAIRQKVCSDIIIETSLISMYAKCKHIDLC 373
Query: 387 KEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSH 446
VF WSA+I G + + AL+LF +M+ E ++P+ S+L A +
Sbjct: 374 FRVFSGASRNHTGPWSAIIAGCVQNELVRDALDLFKRMRR-EDVEPNIATLNSLLPAYAT 432
Query: 447 SGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKT---IHEMPVEVQAQ 503
+ ++ + + G S++ LV + + G + A K I E
Sbjct: 433 LADLRQTMNIHCYL-TKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVV 491
Query: 504 VWAPLLSACMKH 515
+W L+S H
Sbjct: 492 LWGALISGYGMH 503
>gi|225445386|ref|XP_002281711.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic [Vitis vinifera]
Length = 711
Score = 376 bits (966), Expect = e-101, Method: Compositional matrix adjust.
Identities = 207/586 (35%), Positives = 341/586 (58%), Gaps = 10/586 (1%)
Query: 35 LVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYS--KCSDFVSSRKVLDEMP 92
L L+ C ++ + K++H+ +L+ D F + ++ + +R V +++P
Sbjct: 45 LSLEKCTTMSQL---KQIHAQMLRTCLFVDPFSASKIVAFCALHDSGSLPYARLVFNQIP 101
Query: 93 VRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCS-FRQGISM 151
+ + NSII ++ L +AIL + M + GL+ TF S+ C +G +
Sbjct: 102 NP--TTFTCNSIIRGYTNKNLPRQAILFYQLMMLQGLDPDRFTFPSLFKSCGVLCEGKQL 159
Query: 152 HCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGN 211
HC KLG ++ + N++M+MY+ G + AR +FD++ S+VSW T+IG Y
Sbjct: 160 HCHSTKLGFASDAY-IQNTLMNMYSNCGCLVSARKVFDKMVNKSVVSWATMIGAYAQWDL 218
Query: 212 VNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNL 271
+EA L +M SV P+ + +N++ CA+ +L A +H + ++G L +
Sbjct: 219 PHEAIKLFRRMEIASVKPNEITLVNVLTACARSRDLETAKQVHKYIDETGIGFHTVLTSA 278
Query: 272 LVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPN 331
L+ +Y KCG LAR +F+ + EK++F W MI G+ + EA++LF + + V+ +
Sbjct: 279 LMDVYCKCGCYPLARDLFNKMPEKNLFCWNIMINGHVEDSDYEEALSLFNEMQLSGVKGD 338
Query: 332 EATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFE 391
+ T+A+ L AC LG+L GK + YI +E + + T+L+ M++KCG I A VF+
Sbjct: 339 KVTMASLLIACTHLGALELGKWLHVYIEKEKIEVDVALGTALVDMYAKCGSIESAMRVFQ 398
Query: 392 RVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVD 451
+P+KD+ W+A+I G A+ G G +AL LF++MQ E +KPDA+ + +L+ACSH+G+V+
Sbjct: 399 EMPEKDVMTWTALIVGLAMCGQGLKALELFHEMQMSE-VKPDAITFVGVLAACSHAGLVN 457
Query: 452 DGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSA 511
+G+++F SM + +GI+PSIEHY C+VD+LGRAGR A I MP+ V LLSA
Sbjct: 458 EGIAYFNSMPNKYGIQPSIEHYGCMVDMLGRAGRIAEAEDLIQNMPMAPDYFVLVGLLSA 517
Query: 512 CMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEP 571
C H N+ + E AA+ L+ L+P + G Y+L++N+++S W+ A R LM +R + K P
Sbjct: 518 CRIHGNLVVAERAAQQLIELDPKNGGTYVLLSNIYSSMKNWEAAKKMRELMVERNIKKPP 577
Query: 572 GWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKELHIKLLEAGYIAE 617
G S +E+ G V FV GD SH S +I +TL ++ +L AGY+ +
Sbjct: 578 GCSAIEVGGVVHEFVKGDVSHPQSSEIYETLDDMMRRLKSAGYVPD 623
Score = 209 bits (533), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 129/423 (30%), Positives = 223/423 (52%), Gaps = 22/423 (5%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+IR TN + + Y M+ G+ + FTFP + K+C + +GK++H H K+G
Sbjct: 111 IIRGYTNKNLPRQAILFYQLMMLQGLDPDRFTFPSLFKSCG---VLCEGKQLHCHSTKLG 167
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F DA++Q L++MYS C VS+RKV D+M +SVVSW ++I A+++ L EAI +
Sbjct: 168 FASDAYIQNTLMNMYSNCGCLVSARKVFDKMVN--KSVVSWATMIGAYAQWDLPHEAIKL 225
Query: 121 LKEMWVLGLELSASTFVSVVSGCSFRQGI----SMHCCVYKLGLLNNEIPLANSVMSMYA 176
+ M + ++ + T V+V++ C+ + + +H + + G+ + + L +++M +Y
Sbjct: 226 FRRMEIASVKPNEITLVNVLTACARSRDLETAKQVHKYIDETGIGFHTV-LTSALMDVYC 284
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K G AR +F+++ E ++ W +I G+V + EA L N+M+ V D V +
Sbjct: 285 KCGCYPLARDLFNKMPEKNLFCWNIMINGHVEDSDYEEALSLFNEMQLSGVKGDKVTMAS 344
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
L++ C +G L L +H + K + L LV MY KCG +E A RVF + EK
Sbjct: 345 LLIACTHLGALELGKWLHVYIEKEKIEVDVALGTALVDMYAKCGSIESAMRVFQEMPEKD 404
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEE 356
V WT++I G A G +A+ LF + + V+P+ T L+AC+ G +++G
Sbjct: 405 VMTWTALIVGLAMCGQGLKALELFHEMQMSEVKPDAITFVGVLAACSHAGLVNEG----- 459
Query: 357 YIVLNGLESNRQVQTSLIH------MFSKCGRINKAKEVFERVP-DKDLAVWSAMINGYA 409
N + + +Q S+ H M + GRI +A+++ + +P D V +++
Sbjct: 460 IAYFNSMPNKYGIQPSIEHYGCMVDMLGRAGRIAEAEDLIQNMPMAPDYFVLVGLLSACR 519
Query: 410 IHG 412
IHG
Sbjct: 520 IHG 522
Score = 95.1 bits (235), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 76/301 (25%), Positives = 139/301 (46%), Gaps = 41/301 (13%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI + +EE LS ++ M +GV G+ T +L AC ++ ++ GK +H ++ K
Sbjct: 310 MINGHVEDSDYEEALSLFNEMQLSGVKGDKVTMASLLIACTHLGALELGKWLHVYIEKEK 369
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+ D + T L+DMY+KC S+ +V EMP + V++W ++I + +A+ +
Sbjct: 370 IEVDVALGTALVDMYAKCGSIESAMRVFQEMPE--KDVMTWTALIVGLAMCGQGLKALEL 427
Query: 121 LKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGK 180
EM + ++ A TFV V++ CS GL+N I NS+ + Y
Sbjct: 428 FHEMQMSEVKPDAITFVGVLAACS------------HAGLVNEGIAYFNSMPNKYGIQPS 475
Query: 181 VNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILG 240
+ + D +G G + EA L ++ M + PD V + L+
Sbjct: 476 IEHYGCMVDMLGRA---------------GRIAEAEDL---IQNMPMAPDYFVLVGLLSA 517
Query: 241 CAQVGNLFLALSMHSLLLKSGYNNEDPLDN----LLVSMYTKCGDLELARRVFDAVLEKS 296
C GNL +A L++ DP + LL ++Y+ + E A+++ + ++E++
Sbjct: 518 CRIHGNLVVAERAAQQLIEL-----DPKNGGTYVLLSNIYSSMKNWEAAKKMRELMVERN 572
Query: 297 V 297
+
Sbjct: 573 I 573
>gi|357450795|ref|XP_003595674.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355484722|gb|AES65925.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 975
Score = 376 bits (966), Expect = e-101, Method: Compositional matrix adjust.
Identities = 205/621 (33%), Positives = 355/621 (57%), Gaps = 11/621 (1%)
Query: 8 NGSFEETLSTYSSMLQ--TGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDA 65
NG FEE+ + +L G+ + T V+ CA + G H LK+G +
Sbjct: 275 NGVFEESYGLFKGLLNGDEGLMPDVATMVTVIPLCARQGEVRLGMVFHGLALKLGLCGEL 334
Query: 66 FVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMW 125
V + L+DMYSKC +R + D ++V+SWNS+I +S+ A +L++M
Sbjct: 335 KVNSSLLDMYSKCGYLCEARVLFD---TNEKNVISWNSMIGGYSKDRDFRGAFELLRKMQ 391
Query: 126 VLG-LELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGK 180
+ ++++ T ++V+ C F + +H + G + ++ +AN+ ++ YAK G
Sbjct: 392 MEDKVKVNEVTLLNVLPVCEEEIQFLKLKEIHGYALRHGFIQSDELVANAFVAGYAKCGS 451
Query: 181 VNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILG 240
++ A +F + + SW +IGG+V G +A L MR + PDL +L+
Sbjct: 452 LHYAEGVFCGMESKMVSSWNALIGGHVQNGFPRKALDLYLLMRGSGLEPDLFTIASLLSA 511
Query: 241 CAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLW 300
CA++ +L +H +L++G+ ++ + LVS+Y +CG + LA+ FD + EK++ W
Sbjct: 512 CARLKSLSCGKEIHGSMLRNGFELDEFICISLVSLYVQCGKILLAKLFFDNMEEKNLVCW 571
Query: 301 TSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVL 360
+MI G++Q +P +A+++F ++L + + P+E ++ L AC+++ +L GKE+ + V
Sbjct: 572 NTMINGFSQNEFPFDALDMFHQMLSSKIWPDEISIIGALGACSQVSALRLGKELHCFAVK 631
Query: 361 NGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNL 420
+ L + V SLI M++KCG + +++ +F+RV K W+ +I GY IHG G +A+ L
Sbjct: 632 SHLTEHSFVTCSLIDMYAKCGCMEQSQNIFDRVHLKGEVTWNVLITGYGIHGHGRKAIEL 691
Query: 421 FYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLL 480
F MQ+ G +PD+V + ++L+AC+H+G+V +GL + MQS FGI+P +EHY C+VD+L
Sbjct: 692 FKSMQNA-GFRPDSVTFIALLTACNHAGLVAEGLEYLGQMQSLFGIKPKLEHYACVVDML 750
Query: 481 GRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYI 540
GRAGR + AL+ ++E+P + +++W+ LLS+C + ++++GE A LL L P NY+
Sbjct: 751 GRAGRLNEALELVNELPDKPDSRIWSSLLSSCRNYRDLDIGEKVANKLLELGPDKAENYV 810
Query: 541 LMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRK 600
L++N + G W E R M + L K+ G S +EI G V F+ GD S S+ I++
Sbjct: 811 LISNFYARLGKWDEVRKMRQRMKEIGLQKDAGCSWIEIGGKVSRFLVGDESLLQSMKIQQ 870
Query: 601 TLKELHIKLLEAGYIAEADIV 621
T EL K+ + GY + V
Sbjct: 871 TWIELEKKINKIGYKPDTSCV 891
Score = 225 bits (573), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 149/448 (33%), Positives = 238/448 (53%), Gaps = 14/448 (3%)
Query: 8 NGSFEETLSTYSSMLQ-TGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAF 66
N F + + + M+ T ++FT P V+KAC + + G+ VH LK D F
Sbjct: 173 NSLFRDAVFVFVEMISLTEFVPDNFTLPCVIKACVGVYDVRLGEAVHGFALKTKVLSDVF 232
Query: 67 VQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMW- 125
V LI MY K S+ KV D+MP R++VSWNS++ A + +E+ + K +
Sbjct: 233 VGNALIAMYGKFGFVESAVKVFDKMPQ--RNLVSWNSVMYACLENGVFEESYGLFKGLLN 290
Query: 126 -VLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGK 180
GL +T V+V+ C+ R G+ H KLGL E+ + +S++ MY+K G
Sbjct: 291 GDEGLMPDVATMVTVIPLCARQGEVRLGMVFHGLALKLGLC-GELKVNSSLLDMYSKCGY 349
Query: 181 VNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMR-RMSVTPDLVVFLNLIL 239
+ EAR +FD E +++SW ++IGGY + AF L +M+ V + V LN++
Sbjct: 350 LCEARVLFD-TNEKNVISWNSMIGGYSKDRDFRGAFELLRKMQMEDKVKVNEVTLLNVLP 408
Query: 240 GCAQVGNLFLALSMHSLLLKSGYNNEDPL-DNLLVSMYTKCGDLELARRVFDAVLEKSVF 298
C + +H L+ G+ D L N V+ Y KCG L A VF + K V
Sbjct: 409 VCEEEIQFLKLKEIHGYALRHGFIQSDELVANAFVAGYAKCGSLHYAEGVFCGMESKMVS 468
Query: 299 LWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYI 358
W ++IGG+ Q G+P +A++L+ + + + P+ T+A+ LSACA L SLS GKEI +
Sbjct: 469 SWNALIGGHVQNGFPRKALDLYLLMRGSGLEPDLFTIASLLSACARLKSLSCGKEIHGSM 528
Query: 359 VLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQAL 418
+ NG E + + SL+ ++ +CG+I AK F+ + +K+L W+ MING++ + AL
Sbjct: 529 LRNGFELDEFICISLVSLYVQCGKILLAKLFFDNMEEKNLVCWNTMINGFSQNEFPFDAL 588
Query: 419 NLFYKMQHVEGLKPDAVVYTSILSACSH 446
++F++M + + PD + L ACS
Sbjct: 589 DMFHQMLSSK-IWPDEISIIGALGACSQ 615
Score = 192 bits (489), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 144/468 (30%), Positives = 244/468 (52%), Gaps = 22/468 (4%)
Query: 35 LVLKACANINSIWDGKRVHSHV-LKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPV 93
L+L+ C +I G+++H+ + FQ D + T L+ MYS C S V +
Sbjct: 98 LLLQLCGEYKNIEIGRKIHNFISTSPHFQNDVVLITRLVTMYSICDSPYDSCLVFN--AS 155
Query: 94 RLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFV--SVVSGC----SFRQ 147
R +++ WN+++S + R L +A+ V EM L E F V+ C R
Sbjct: 156 RRKNLFLWNALLSGYLRNSLFRDAVFVFVEMISL-TEFVPDNFTLPCVIKACVGVYDVRL 214
Query: 148 GISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYV 207
G ++H K +L +++ + N++++MY KFG V A +FD++ + ++VSW +++ +
Sbjct: 215 GEAVHGFALKTKVL-SDVFVGNALIAMYGKFGFVESAVKVFDKMPQRNLVSWNSVMYACL 273
Query: 208 NVGNVNEAFGLCNQMRR--MSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNE 265
G E++GL + + PD+ + +I CA+ G + L + H L LK G E
Sbjct: 274 ENGVFEESYGLFKGLLNGDEGLMPDVATMVTVIPLCARQGEVRLGMVFHGLALKLGLCGE 333
Query: 266 DPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRL-L 324
+++ L+ MY+KCG L AR +FD EK+V W SMIGGY++ A L +++ +
Sbjct: 334 LKVNSSLLDMYSKCGYLCEARVLFDTN-EKNVISWNSMIGGYSKDRDFRGAFELLRKMQM 392
Query: 325 KTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNG-LESNRQVQTSLIHMFSKCGRI 383
+ V+ NE TL L C E K KEI Y + +G ++S+ V + + ++KCG +
Sbjct: 393 EDKVKVNEVTLLNVLPVCEEEIQFLKLKEIHGYALRHGFIQSDELVANAFVAGYAKCGSL 452
Query: 384 NKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSA 443
+ A+ VF + K ++ W+A+I G+ +G +AL+L+ M+ GL+PD S+LSA
Sbjct: 453 HYAEGVFCGMESKMVSSWNALIGGHVQNGFPRKALDLYLLMRG-SGLEPDLFTIASLLSA 511
Query: 444 CSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLC--LVDLLGRAGRFDLA 489
C+ + G SM N G E ++ ++C LV L + G+ LA
Sbjct: 512 CARLKSLSCGKEIHGSMLRN-GFE--LDEFICISLVSLYVQCGKILLA 556
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 67/249 (26%), Positives = 119/249 (47%), Gaps = 7/249 (2%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+I NG + L Y M +G+ + FT +L ACA + S+ GK +H +L+ G
Sbjct: 473 LIGGHVQNGFPRKALDLYLLMRGSGLEPDLFTIASLLSACARLKSLSCGKEIHGSMLRNG 532
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F+ D F+ L+ +Y +C + ++ D M +++V WN++I+ S+ +A+ +
Sbjct: 533 FELDEFICISLVSLYVQCGKILLAKLFFDNM--EEKNLVCWNTMINGFSQNEFPFDALDM 590
Query: 121 LKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
+M + + + + CS R G +HC K L + + S++ MYA
Sbjct: 591 FHQMLSSKIWPDEISIIGALGACSQVSALRLGKELHCFAVKSHLTEHSF-VTCSLIDMYA 649
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K G + ++++IFD + V+W +I GY G+ +A L M+ PD V F+
Sbjct: 650 KCGCMEQSQNIFDRVHLKGEVTWNVLITGYGIHGHGRKAIELFKSMQNAGFRPDSVTFIA 709
Query: 237 LILGCAQVG 245
L+ C G
Sbjct: 710 LLTACNHAG 718
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 131/257 (50%), Gaps = 9/257 (3%)
Query: 208 NVGNVNEAFG-----LCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSG- 261
N GN+N+AF L + + + P ++ L L L C + N+ + +H+ + S
Sbjct: 66 NTGNLNQAFNFLQSNLNDVVSSSNSKPKQLIGLLLQL-CGEYKNIEIGRKIHNFISTSPH 124
Query: 262 YNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFK 321
+ N+ L LV+MY+ C + VF+A K++FLW +++ GY + +AV +F
Sbjct: 125 FQNDVVLITRLVTMYSICDSPYDSCLVFNASRRKNLFLWNALLSGYLRNSLFRDAVFVFV 184
Query: 322 RLLK-TSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKC 380
++ T P+ TL + AC + + G+ + + + + S+ V +LI M+ K
Sbjct: 185 EMISLTEFVPDNFTLPCVIKACVGVYDVRLGEAVHGFALKTKVLSDVFVGNALIAMYGKF 244
Query: 381 GRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQH-VEGLKPDAVVYTS 439
G + A +VF+++P ++L W++++ +G+ +++ LF + + EGL PD +
Sbjct: 245 GFVESAVKVFDKMPQRNLVSWNSVMYACLENGVFEESYGLFKGLLNGDEGLMPDVATMVT 304
Query: 440 ILSACSHSGMVDDGLSF 456
++ C+ G V G+ F
Sbjct: 305 VIPLCARQGEVRLGMVF 321
Score = 47.8 bits (112), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 88/201 (43%), Gaps = 11/201 (5%)
Query: 339 LSACAELGSLSKGKEIEEYIVLNGLESNRQVQ-TSLIHMFSKCGRINKAKEVFERVPDKD 397
L C E ++ G++I +I + N V T L+ M+S C + VF K+
Sbjct: 100 LQLCGEYKNIEIGRKIHNFISTSPHFQNDVVLITRLVTMYSICDSPYDSCLVFNASRRKN 159
Query: 398 LAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFF 457
L +W+A+++GY + + A+ +F +M + PD ++ AC G+ D L
Sbjct: 160 LFLWNALLSGYLRNSLFRDAVFVFVEMISLTEFVPDNFTLPCVIKAC--VGVYDVRLG-- 215
Query: 458 KSMQSNFGIEPSIEHYL----CLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACM 513
F ++ + + L+ + G+ G + A+K +MP + W ++ AC+
Sbjct: 216 -EAVHGFALKTKVLSDVFVGNALIAMYGKFGFVESAVKVFDKMP-QRNLVSWNSVMYACL 273
Query: 514 KHHNVELGEYAAKNLLTLNPG 534
++ E K LL + G
Sbjct: 274 ENGVFEESYGLFKGLLNGDEG 294
>gi|449485624|ref|XP_004157227.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g57430, chloroplastic-like [Cucumis sativus]
Length = 863
Score = 376 bits (966), Expect = e-101, Method: Compositional matrix adjust.
Identities = 207/601 (34%), Positives = 328/601 (54%), Gaps = 8/601 (1%)
Query: 19 SSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKC 78
+ M+ TG+ N F+ VL ACA + G +VH +++K+G+ D F L+DMY+K
Sbjct: 177 TEMISTGISPNEFSLSTVLNACAGLEDENYGMKVHGYLIKLGYDSDPFSANALLDMYAKS 236
Query: 79 SDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVS 138
++ V E+P +VSWN++I+ ND A+ +L +M + S T S
Sbjct: 237 GCPEAAIAVFYEIPKP--DIVSWNAVIAGCVLHEKNDLALKLLGKMGSYRVAPSMFTLSS 294
Query: 139 VVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGET 194
+ C+ + G +H + K+ + + + ++ MY+K G + +AR +FD +
Sbjct: 295 ALKACAAIGLVKLGRQLHSALMKMDMEPDSF-VGVGLIDMYSKCGLLQDARMVFDLMPXK 353
Query: 195 SIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMH 254
++ W +II GY N G EA L M + + + ++ A +H
Sbjct: 354 DVIVWNSIISGYSNCGYDIEAMSLFTNMYKEGLEFNQTTLSTILKSTAGSQANGFCEQVH 413
Query: 255 SLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPS 314
++ +KSGY + + N L+ Y KC LE A +VF+ + + +TSMI Y+Q G
Sbjct: 414 TISIKSGYQYDGYVANSLLDSYGKCCLLEDAAKVFEVCPAEDLVAYTSMITAYSQYGLGE 473
Query: 315 EAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLI 374
EA+ ++ R+ ++P+ ++ +ACA L + +GK+I +++ GL S+ SL+
Sbjct: 474 EALKMYLRMQDRDIKPDAFIFSSLFNACANLSAYEQGKQIHVHVLKCGLLSDVFAGNSLV 533
Query: 375 HMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDA 434
+M++KCG I+ A +F + + + WSAMI G A HG G +AL LFY+M G+ P+
Sbjct: 534 NMYAKCGSIDDASCIFNEISWRGIVSWSAMIGGLAQHGHGRKALQLFYQMLK-NGILPNH 592
Query: 435 VVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIH 494
+ S+LSAC+H+G+V + FF M+ FGI P+ EHY C+VD+LGR GR D A+ +
Sbjct: 593 ITLVSVLSACNHAGLVTEARRFFGLMEKLFGITPTQEHYACMVDILGRVGRLDEAMVLVK 652
Query: 495 EMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKE 554
EMP + A VW LL A H N+ELG +AA+ LLTL P +G +IL+AN++ S GMW
Sbjct: 653 EMPFQASAAVWGALLGAARIHKNIELGRHAAEMLLTLEPEKSGTHILLANIYASTGMWDN 712
Query: 555 AATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKELHIKLLEAGY 614
A R M + + KEPG S +E+ V F+ GDRSH S +I L +L +L AGY
Sbjct: 713 VAKVRRSMKNSLVKKEPGMSWIELKDKVYTFIVGDRSHPRSKEIYVKLDDLRERLTSAGY 772
Query: 615 I 615
+
Sbjct: 773 V 773
Score = 199 bits (506), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 129/428 (30%), Positives = 220/428 (51%), Gaps = 52/428 (12%)
Query: 72 IDMYSKCSDFVSSRK-VLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLE 130
+++YSKC F +RK V+D L VSW+++IS + + +EA+L EM++LG +
Sbjct: 89 VNLYSKCQCFRVARKLVIDSSEPDL---VSWSALISGYVQNGRGEEALLTYYEMYLLGAK 145
Query: 131 LSASTFVSVVSGCSFRQGISMHCCVYKLGLLN---------NEIPL-------------- 167
+ TF SV+ GCS + + + ++++ L+ NE L
Sbjct: 146 GNEFTFSSVLKGCSLTRNLELGKQIHRVALVTEMISTGISPNEFSLSTVLNACAGLEDEN 205
Query: 168 --------------------ANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYV 207
AN+++ MYAK G A ++F EI + IVSW +I G V
Sbjct: 206 YGMKVHGYLIKLGYDSDPFSANALLDMYAKSGCPEAAIAVFYEIPKPDIVSWNAVIAGCV 265
Query: 208 NVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDP 267
+ A L +M V P + + + CA +G + L +HS L+K +
Sbjct: 266 LHEKNDLALKLLGKMGSYRVAPSMFTLSSALKACAAIGLVKLGRQLHSALMKMDMEPDSF 325
Query: 268 LDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTS 327
+ L+ MY+KCG L+ AR VFD + K V +W S+I GY+ GY EA++LF + K
Sbjct: 326 VGVGLIDMYSKCGLLQDARMVFDLMPXKDVIVWNSIISGYSNCGYDIEAMSLFTNMYKEG 385
Query: 328 VRPNEATLATTLSACAELGSLSKG--KEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINK 385
+ N+ TL+T L + A GS + G +++ + +G + + V SL+ + KC +
Sbjct: 386 LEFNQTTLSTILKSTA--GSQANGFCEQVHTISIKSGYQYDGYVANSLLDSYGKCCLLED 443
Query: 386 AKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACS 445
A +VFE P +DL +++MI Y+ +G+G++AL ++ +MQ + +KPDA +++S+ +AC+
Sbjct: 444 AAKVFEVCPAEDLVAYTSMITAYSQYGLGEEALKMYLRMQDRD-IKPDAFIFSSLFNACA 502
Query: 446 HSGMVDDG 453
+ + G
Sbjct: 503 NLSAYEQG 510
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 87/312 (27%), Positives = 158/312 (50%), Gaps = 9/312 (2%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+I +N G E +S +++M + G+ N T +LK+ A + ++VH+ +K G
Sbjct: 361 IISGYSNCGYDIEAMSLFTNMYKEGLEFNQTTLSTILKSTAGSQANGFCEQVHTISIKSG 420
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+Q D +V L+D Y KC + KV + P +V++ S+I+A+S+ L +EA+ +
Sbjct: 421 YQYDGYVANSLLDSYGKCCLLEDAAKVFEVCPA--EDLVAYTSMITAYSQYGLGEEALKM 478
Query: 121 LKEMWVLGLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
M ++ A F S+ + C ++ QG +H V K GLL +++ NS+++MYA
Sbjct: 479 YLRMQDRDIKPDAFIFSSLFNACANLSAYEQGKQIHVHVLKCGLL-SDVFAGNSLVNMYA 537
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K G +++A IF+EI IVSW+ +IGG G+ +A L QM + + P+ + ++
Sbjct: 538 KCGSIDDASCIFNEISWRGIVSWSAMIGGLAQHGHGRKALQLFYQMLKNGILPNHITLVS 597
Query: 237 LILGCAQVGNLFLALSMHSLLLK-SGYNNEDPLDNLLVSMYTKCGDLELAR-RVFDAVLE 294
++ C G + A L+ K G +V + + G L+ A V + +
Sbjct: 598 VLSACNHAGLVTEARRFFGLMEKLFGITPTQEHYACMVDILGRVGRLDEAMVLVKEMPFQ 657
Query: 295 KSVFLWTSMIGG 306
S +W +++G
Sbjct: 658 ASAAVWGALLGA 669
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 117/279 (41%), Gaps = 43/279 (15%)
Query: 273 VSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEA---------------- 316
V++Y+KC +AR++ E + W+++I GY Q G EA
Sbjct: 89 VNLYSKCQCFRVARKLVIDSSEPDLVSWSALISGYVQNGRGEEALLTYYEMYLLGAKGNE 148
Query: 317 ------------------------VNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGK 352
V L ++ T + PNE +L+T L+ACA L + G
Sbjct: 149 FTFSSVLKGCSLTRNLELGKQIHRVALVTEMISTGISPNEFSLSTVLNACAGLEDENYGM 208
Query: 353 EIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHG 412
++ Y++ G +S+ +L+ M++K G A VF +P D+ W+A+I G +H
Sbjct: 209 KVHGYLIKLGYDSDPFSANALLDMYAKSGCPEAAIAVFYEIPKPDIVSWNAVIAGCVLHE 268
Query: 413 MGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEH 472
D AL L KM + P +S L AC+ G+V G ++ +EP
Sbjct: 269 KNDLALKLLGKMGSYR-VAPSMFTLSSALKACAAIGLVKLGRQLHSALM-KMDMEPDSFV 326
Query: 473 YLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSA 511
+ L+D+ + G A MP + VW ++S
Sbjct: 327 GVGLIDMYSKCGLLQDARMVFDLMPXK-DVIVWNSIISG 364
>gi|115488988|ref|NP_001066981.1| Os12g0552300 [Oryza sativa Japonica Group]
gi|113649488|dbj|BAF30000.1| Os12g0552300 [Oryza sativa Japonica Group]
Length = 1175
Score = 376 bits (966), Expect = e-101, Method: Compositional matrix adjust.
Identities = 196/622 (31%), Positives = 341/622 (54%), Gaps = 10/622 (1%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+I G E L + M +G+ + T +L ACA++ + G ++HS++ K G
Sbjct: 215 LISGHAQCGHGEHALEIFEEMQFSGLSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAG 274
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLND--EAI 118
D ++ L+D+Y KC D ++ + + +VV WN ++ A + +ND ++
Sbjct: 275 ISSDYIMEGSLLDLYVKCGDVETALVIFNSSD--RTNVVLWNLMLVAFGQ--INDLAKSF 330
Query: 119 LVLKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGL---LNNEIPLANSVMSMY 175
+ +M G+ + T+ ++ C+ + I + ++ L + +++ ++ ++ MY
Sbjct: 331 ELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQIHSLSVKTGFESDMYVSGVLIDMY 390
Query: 176 AKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFL 235
+K+G + +AR + + + E +VSWT++I GYV +A +M++ + PD +
Sbjct: 391 SKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHECCKDALAAFKEMQKCGIWPDNIGLA 450
Query: 236 NLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEK 295
+ I GCA + + L +H+ + SGY+ + + N LV++Y +CG + A F+ + K
Sbjct: 451 SAISGCAGINAMRQGLQIHARIYVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEIEHK 510
Query: 296 SVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIE 355
W ++ G+AQ G EA+ +F R+ ++ V+ N T + LSA A L + +GK+I
Sbjct: 511 DEITWNGLVSGFAQSGLHEEALKVFMRMDQSGVKHNVFTFVSALSASANLAEIKQGKQIH 570
Query: 356 EYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGD 415
++ G +V +LI ++ KCG AK F + +++ W+ +I + HG G
Sbjct: 571 ARVIKTGHSFETEVGNALISLYGKCGSFEDAKMEFSEMSERNEVSWNTIITSCSQHGRGL 630
Query: 416 QALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLC 475
+AL+LF +M+ EG+KP+ V + +L+ACSH G+V++GLS+FKSM +GI P +HY C
Sbjct: 631 EALDLFDQMKK-EGIKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSDEYGIRPRPDHYAC 689
Query: 476 LVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGS 535
++D+ GRAG+ D A K I EMP+ A VW LLSAC H N+E+GE+AAK+LL L P
Sbjct: 690 VIDIFGRAGQLDRAKKFIEEMPIAADAMVWRTLLSACKVHKNIEVGEFAAKHLLELEPHD 749
Query: 536 TGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLS 595
+ +Y+L++N + W R +M DR + KEPG S +E+ V F GDR H L+
Sbjct: 750 SASYVLLSNAYAVTEKWANRDQVRKMMRDRGVRKEPGRSWIEVKNVVHAFFVGDRLHPLA 809
Query: 596 VDIRKTLKELHIKLLEAGYIAE 617
I L ++ ++ + GY E
Sbjct: 810 EQIYNFLAVINDRVAKVGYKQE 831
Score = 246 bits (628), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 143/520 (27%), Positives = 268/520 (51%), Gaps = 12/520 (2%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
M+ NG EE L Y M + GV + VL +C G+ +H+ K G
Sbjct: 114 MLSGYAQNGLGEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHG 173
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F + FV +I +Y +C F + +V +MP R V++N++IS H++ + A+ +
Sbjct: 174 FCSEIFVGNAVITLYLRCGSFRLAERVFCDMP--HRDTVTFNTLISGHAQCGHGEHALEI 231
Query: 121 LKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
+EM GL T S+++ C+ ++G +H ++K G+ ++ I + S++ +Y
Sbjct: 232 FEEMQFSGLSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYI-MEGSLLDLYV 290
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K G V A IF+ T++V W ++ + + ++ ++F L QM+ + P+ +
Sbjct: 291 KCGDVETALVIFNSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTYPC 350
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
++ C + L +HSL +K+G+ ++ + +L+ MY+K G LE ARRV + + EK
Sbjct: 351 ILRTCTCTREIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKD 410
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEE 356
V WTSMI GY Q +A+ FK + K + P+ LA+ +S CA + ++ +G +I
Sbjct: 411 VVSWTSMIAGYVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQIHA 470
Query: 357 YIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQ 416
I ++G + + +L++++++CGRI +A FE + KD W+ +++G+A G+ ++
Sbjct: 471 RIYVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEIEHKDEITWNGLVSGFAQSGLHEE 530
Query: 417 ALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFF-KSMQSNFGIEPSIEHYLC 475
AL +F +M G+K + + S LSA ++ + G + +++ E + +
Sbjct: 531 ALKVFMRMDQ-SGVKHNVFTFVSALSASANLAEIKQGKQIHARVIKTGHSFETEVGN--A 587
Query: 476 LVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKH 515
L+ L G+ G F+ A EM E W ++++C +H
Sbjct: 588 LISLYGKCGSFEDAKMEFSEMS-ERNEVSWNTIITSCSQH 626
Score = 214 bits (544), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 135/469 (28%), Positives = 235/469 (50%), Gaps = 10/469 (2%)
Query: 33 FPLVLKACANINSIWDG-KRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEM 91
F L+AC W +H+ + G + V LID+YSK + +R+V +E+
Sbjct: 44 FACALRACRGNGRRWQVVPEIHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEEL 103
Query: 92 PVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCS----FRQ 147
R VSW +++S +++ L +EA+ + ++M G+ + SV+S C+ F Q
Sbjct: 104 SAR--DNVSWVAMLSGYAQNGLGEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQ 161
Query: 148 GISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYV 207
G +H YK G + EI + N+V+++Y + G A +F ++ V++ T+I G+
Sbjct: 162 GRLIHAQGYKHGFCS-EIFVGNAVITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHA 220
Query: 208 NVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDP 267
G+ A + +M+ ++PD V +L+ CA +G+L +HS L K+G +++
Sbjct: 221 QCGHGEHALEIFEEMQFSGLSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYI 280
Query: 268 LDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTS 327
++ L+ +Y KCGD+E A +F++ +V LW M+ + Q+ +++ LF ++
Sbjct: 281 MEGSLLDLYVKCGDVETALVIFNSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAG 340
Query: 328 VRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAK 387
+RPN+ T L C + G++I V G ES+ V LI M+SK G + KA+
Sbjct: 341 IRPNQFTYPCILRTCTCTREIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKAR 400
Query: 388 EVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHS 447
V E + +KD+ W++MI GY H AL F +MQ G+ PD + S +S C+
Sbjct: 401 RVLEMLKEKDVVSWTSMIAGYVQHECCKDALAAFKEMQKC-GIWPDNIGLASAISGCAGI 459
Query: 448 GMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEM 496
+ GL + + G + + LV+L R GR A + E+
Sbjct: 460 NAMRQGLQIHARIYVS-GYSGDVSIWNALVNLYARCGRIREAFSSFEEI 507
>gi|108862806|gb|ABA99524.2| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 1176
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 196/622 (31%), Positives = 341/622 (54%), Gaps = 10/622 (1%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+I G E L + M +G+ + T +L ACA++ + G ++HS++ K G
Sbjct: 215 LISGHAQCGHGEHALEIFEEMQFSGLSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAG 274
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLND--EAI 118
D ++ L+D+Y KC D ++ + + +VV WN ++ A + +ND ++
Sbjct: 275 ISSDYIMEGSLLDLYVKCGDVETALVIFNSSD--RTNVVLWNLMLVAFGQ--INDLAKSF 330
Query: 119 LVLKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGL---LNNEIPLANSVMSMY 175
+ +M G+ + T+ ++ C+ + I + ++ L + +++ ++ ++ MY
Sbjct: 331 ELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQIHSLSVKTGFESDMYVSGVLIDMY 390
Query: 176 AKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFL 235
+K+G + +AR + + + E +VSWT++I GYV +A +M++ + PD +
Sbjct: 391 SKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHECCKDALAAFKEMQKCGIWPDNIGLA 450
Query: 236 NLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEK 295
+ I GCA + + L +H+ + SGY+ + + N LV++Y +CG + A F+ + K
Sbjct: 451 SAISGCAGINAMRQGLQIHARIYVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEIEHK 510
Query: 296 SVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIE 355
W ++ G+AQ G EA+ +F R+ ++ V+ N T + LSA A L + +GK+I
Sbjct: 511 DEITWNGLVSGFAQSGLHEEALKVFMRMDQSGVKHNVFTFVSALSASANLAEIKQGKQIH 570
Query: 356 EYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGD 415
++ G +V +LI ++ KCG AK F + +++ W+ +I + HG G
Sbjct: 571 ARVIKTGHSFETEVGNALISLYGKCGSFEDAKMEFSEMSERNEVSWNTIITSCSQHGRGL 630
Query: 416 QALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLC 475
+AL+LF +M+ EG+KP+ V + +L+ACSH G+V++GLS+FKSM +GI P +HY C
Sbjct: 631 EALDLFDQMKK-EGIKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSDEYGIRPRPDHYAC 689
Query: 476 LVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGS 535
++D+ GRAG+ D A K I EMP+ A VW LLSAC H N+E+GE+AAK+LL L P
Sbjct: 690 VIDIFGRAGQLDRAKKFIEEMPIAADAMVWRTLLSACKVHKNIEVGEFAAKHLLELEPHD 749
Query: 536 TGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLS 595
+ +Y+L++N + W R +M DR + KEPG S +E+ V F GDR H L+
Sbjct: 750 SASYVLLSNAYAVTEKWANRDQVRKMMRDRGVRKEPGRSWIEVKNVVHAFFVGDRLHPLA 809
Query: 596 VDIRKTLKELHIKLLEAGYIAE 617
I L ++ ++ + GY E
Sbjct: 810 EQIYNFLAVINDRVAKVGYKQE 831
Score = 246 bits (629), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 143/520 (27%), Positives = 268/520 (51%), Gaps = 12/520 (2%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
M+ NG EE L Y M + GV + VL +C G+ +H+ K G
Sbjct: 114 MLSGYAQNGLGEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHG 173
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F + FV +I +Y +C F + +V +MP R V++N++IS H++ + A+ +
Sbjct: 174 FCSEIFVGNAVITLYLRCGSFRLAERVFCDMP--HRDTVTFNTLISGHAQCGHGEHALEI 231
Query: 121 LKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
+EM GL T S+++ C+ ++G +H ++K G+ ++ I + S++ +Y
Sbjct: 232 FEEMQFSGLSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYI-MEGSLLDLYV 290
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K G V A IF+ T++V W ++ + + ++ ++F L QM+ + P+ +
Sbjct: 291 KCGDVETALVIFNSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTYPC 350
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
++ C + L +HSL +K+G+ ++ + +L+ MY+K G LE ARRV + + EK
Sbjct: 351 ILRTCTCTREIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKD 410
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEE 356
V WTSMI GY Q +A+ FK + K + P+ LA+ +S CA + ++ +G +I
Sbjct: 411 VVSWTSMIAGYVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQIHA 470
Query: 357 YIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQ 416
I ++G + + +L++++++CGRI +A FE + KD W+ +++G+A G+ ++
Sbjct: 471 RIYVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEIEHKDEITWNGLVSGFAQSGLHEE 530
Query: 417 ALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFF-KSMQSNFGIEPSIEHYLC 475
AL +F +M G+K + + S LSA ++ + G + +++ E + +
Sbjct: 531 ALKVFMRMDQ-SGVKHNVFTFVSALSASANLAEIKQGKQIHARVIKTGHSFETEVGN--A 587
Query: 476 LVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKH 515
L+ L G+ G F+ A EM E W ++++C +H
Sbjct: 588 LISLYGKCGSFEDAKMEFSEMS-ERNEVSWNTIITSCSQH 626
Score = 213 bits (543), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 135/469 (28%), Positives = 235/469 (50%), Gaps = 10/469 (2%)
Query: 33 FPLVLKACANINSIWDG-KRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEM 91
F L+AC W +H+ + G + V LID+YSK + +R+V +E+
Sbjct: 44 FACALRACRGNGRRWQVVPEIHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEEL 103
Query: 92 PVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCS----FRQ 147
R VSW +++S +++ L +EA+ + ++M G+ + SV+S C+ F Q
Sbjct: 104 SAR--DNVSWVAMLSGYAQNGLGEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQ 161
Query: 148 GISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYV 207
G +H YK G + EI + N+V+++Y + G A +F ++ V++ T+I G+
Sbjct: 162 GRLIHAQGYKHGFCS-EIFVGNAVITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHA 220
Query: 208 NVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDP 267
G+ A + +M+ ++PD V +L+ CA +G+L +HS L K+G +++
Sbjct: 221 QCGHGEHALEIFEEMQFSGLSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYI 280
Query: 268 LDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTS 327
++ L+ +Y KCGD+E A +F++ +V LW M+ + Q+ +++ LF ++
Sbjct: 281 MEGSLLDLYVKCGDVETALVIFNSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAG 340
Query: 328 VRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAK 387
+RPN+ T L C + G++I V G ES+ V LI M+SK G + KA+
Sbjct: 341 IRPNQFTYPCILRTCTCTREIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKAR 400
Query: 388 EVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHS 447
V E + +KD+ W++MI GY H AL F +MQ G+ PD + S +S C+
Sbjct: 401 RVLEMLKEKDVVSWTSMIAGYVQHECCKDALAAFKEMQKC-GIWPDNIGLASAISGCAGI 459
Query: 448 GMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEM 496
+ GL + + G + + LV+L R GR A + E+
Sbjct: 460 NAMRQGLQIHARIYVS-GYSGDVSIWNALVNLYARCGRIREAFSSFEEI 507
>gi|357165485|ref|XP_003580399.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Brachypodium distachyon]
Length = 886
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 230/677 (33%), Positives = 354/677 (52%), Gaps = 72/677 (10%)
Query: 7 NNGSFEETLSTYSSMLQTGVH-GNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDA 65
+G F L + SM QTG N+FTF V+K+C + ++ + K Q D
Sbjct: 135 QSGQFLNALDIFVSMRQTGDSLPNAFTFGCVMKSCGALGWHEVALQLLGLLSKFDSQDDP 194
Query: 66 FVQTGLIDMYSKCS--DFVSSR-----------------------------KVLDEMPVR 94
VQT L+DM +C DF S + ++ MP R
Sbjct: 195 DVQTALVDMLVRCGAMDFASKQFSRIKNPTIICRNSMLVGYAKSHGVDHALEIFKSMPER 254
Query: 95 LRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGC----SFRQGIS 150
VVSWN +ISA S++ EA+ ++ +M G+ ++T+ S ++ C S G
Sbjct: 255 --DVVSWNMVISALSKSGRVREALDMVVDMHGKGVRPDSTTYTSSLTACARLSSLEWGKQ 312
Query: 151 MHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVG 210
+H V + L + + +A++++ +YAK G EA+ +F + + + VSWT +IGG++ G
Sbjct: 313 LHVQVIR-NLPHIDPYVASAMVELYAKCGCFKEAKRVFSSLRDRNSVSWTVLIGGFLQYG 371
Query: 211 NVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDN 270
+E+ L NQMR + D LI GC ++ L +HSL LKSG+ + N
Sbjct: 372 CFSESVELFNQMRAELMAVDQFALATLISGCCNTMDICLGSQLHSLCLKSGHTRAVVVSN 431
Query: 271 LLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKR-------- 322
L+SMY KCG+L+ A +F+ + E+ + WT MI Y+Q+G ++A F
Sbjct: 432 SLISMYAKCGNLQNAELIFNFMAERDIVSWTGMITAYSQVGNIAKAREFFDDMSTRNVIT 491
Query: 323 ------------------------LLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYI 358
L + V P+ T T CA++G+ G +I +
Sbjct: 492 WNAMLGAYIQHGAEEDGLKMYSDMLTEKDVIPDWVTYVTLFRGCADIGANKLGDQIIGHT 551
Query: 359 VLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQAL 418
V GL + V ++I M+SKCGRI++A++ F+ + KDL W+AMI GY+ HGMG QA+
Sbjct: 552 VKVGLILDTSVVNAVITMYSKCGRISEARKAFDFLSRKDLVSWNAMITGYSQHGMGKQAI 611
Query: 419 NLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVD 478
+F + + +G KPD + Y ++LS CSHSG+V++G +F M+ + I P +EH+ C+VD
Sbjct: 612 EIFDDILN-KGAKPDYISYVAVLSGCSHSGLVEEGKFYFDMMKRDHNISPGLEHFSCMVD 670
Query: 479 LLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGN 538
LLGRAG A I EMP++ A+VW LLSAC H N +L E AAK+L L+ +G
Sbjct: 671 LLGRAGHLIEAKNLIDEMPMKPTAEVWGALLSACKTHGNNDLAELAAKHLFDLDSPGSGG 730
Query: 539 YILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDI 598
Y+L+A ++ AG ++A R LM D+ + K PG+S +E++ V VF A D SH + I
Sbjct: 731 YMLLAKMYADAGKSDDSAQVRKLMRDKGIKKSPGYSWMEVNNRVHVFKAEDVSHPQVIAI 790
Query: 599 RKTLKELHIKLLEAGYI 615
R+ L EL K+ GY+
Sbjct: 791 REKLDELMEKIAHLGYV 807
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 118/453 (26%), Positives = 211/453 (46%), Gaps = 47/453 (10%)
Query: 6 TNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDA 65
+ +G E L M GV +S T+ L ACA ++S+ GK++H V++ D
Sbjct: 267 SKSGRVREALDMVVDMHGKGVRPDSTTYTSSLTACARLSSLEWGKQLHVQVIRNLPHIDP 326
Query: 66 FVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMW 125
+V + ++++Y+KC F +++V + R R+ VSW +I + E++ + +M
Sbjct: 327 YVASAMVELYAKCGCFKEAKRVFSSL--RDRNSVSWTVLIGGFLQYGCFSESVELFNQMR 384
Query: 126 VLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGLLNNE---IPLANSVMSMYAKFGKVN 182
+ + +++SGC I + ++ L L + + ++NS++SMYAK G +
Sbjct: 385 AELMAVDQFALATLISGCCNTMDICLGSQLHSLCLKSGHTRAVVVSNSLISMYAKCGNLQ 444
Query: 183 EARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMR------------------- 223
A IF+ + E IVSWT +I Y VGN+ +A + M
Sbjct: 445 NAELIFNFMAERDIVSWTGMITAYSQVGNIAKAREFFDDMSTRNVITWNAMLGAYIQHGA 504
Query: 224 -------------RMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDN 270
V PD V ++ L GCA +G L + +K G + + N
Sbjct: 505 EEDGLKMYSDMLTEKDVIPDWVTYVTLFRGCADIGANKLGDQIIGHTVKVGLILDTSVVN 564
Query: 271 LLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRP 330
+++MY+KCG + AR+ FD + K + W +MI GY+Q G +A+ +F +L +P
Sbjct: 565 AVITMYSKCGRISEARKAFDFLSRKDLVSWNAMITGYSQHGMGKQAIEIFDDILNKGAKP 624
Query: 331 NEATLATTLSACAELGSLSKGKEI-----EEYIVLNGLESNRQVQTSLIHMFSKCGRINK 385
+ + LS C+ G + +GK ++ + GLE + ++ + + G + +
Sbjct: 625 DYISYVAVLSGCSHSGLVEEGKFYFDMMKRDHNISPGLEHF----SCMVDLLGRAGHLIE 680
Query: 386 AKEVFERVPDKDLA-VWSAMINGYAIHGMGDQA 417
AK + + +P K A VW A+++ HG D A
Sbjct: 681 AKNLIDEMPMKPTAEVWGALLSACKTHGNNDLA 713
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 79/325 (24%), Positives = 151/325 (46%), Gaps = 38/325 (11%)
Query: 160 LLNNEIPLANSV-----MSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNE 214
LL +EI N + M+ YAK G +++A +F + + SW TI+ GY G
Sbjct: 82 LLRDEITEPNVITHNIMMNGYAKLGSLSDAVELFGRMPTRDVASWNTIMSGYYQSGQFLN 141
Query: 215 AFGLCNQMRRMSVT-PDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLV 273
A + MR+ + P+ F ++ C +G +AL + LL K ++ + LV
Sbjct: 142 ALDIFVSMRQTGDSLPNAFTFGCVMKSCGALGWHEVALQLLGLLSKFDSQDDPDVQTALV 201
Query: 274 SMYTKCGDLELARR-------------------------------VFDAVLEKSVFLWTS 302
M +CG ++ A + +F ++ E+ V W
Sbjct: 202 DMLVRCGAMDFASKQFSRIKNPTIICRNSMLVGYAKSHGVDHALEIFKSMPERDVVSWNM 261
Query: 303 MIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNG 362
+I ++ G EA+++ + VRP+ T ++L+ACA L SL GK++ ++ N
Sbjct: 262 VISALSKSGRVREALDMVVDMHGKGVRPDSTTYTSSLTACARLSSLEWGKQLHVQVIRNL 321
Query: 363 LESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFY 422
+ V ++++ +++KCG +AK VF + D++ W+ +I G+ +G +++ LF
Sbjct: 322 PHIDPYVASAMVELYAKCGCFKEAKRVFSSLRDRNSVSWTVLIGGFLQYGCFSESVELFN 381
Query: 423 KMQHVEGLKPDAVVYTSILSACSHS 447
+M+ E + D +++S C ++
Sbjct: 382 QMR-AELMAVDQFALATLISGCCNT 405
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 79/189 (41%), Gaps = 33/189 (17%)
Query: 335 LATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAK------- 387
LA L +C +L+ + + ++ GL S +Q +L+H + CG ++ A+
Sbjct: 28 LADALRSCGARSALTGARTLHSRLINVGLASVVFLQNTLLHAYLSCGALSDARNLLRDEI 87
Query: 388 -------------------------EVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFY 422
E+F R+P +D+A W+ +++GY G AL++F
Sbjct: 88 TEPNVITHNIMMNGYAKLGSLSDAVELFGRMPTRDVASWNTIMSGYYQSGQFLNALDIFV 147
Query: 423 KMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGR 482
M+ P+A + ++ +C G + L + S F + + LVD+L R
Sbjct: 148 SMRQTGDSLPNAFTFGCVMKSCGALGWHEVALQLL-GLLSKFDSQDDPDVQTALVDMLVR 206
Query: 483 AGRFDLALK 491
G D A K
Sbjct: 207 CGAMDFASK 215
Score = 38.9 bits (89), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 28/133 (21%), Positives = 62/133 (46%), Gaps = 12/133 (9%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI + +G ++ + + +L G + ++ VL C++ + +GK +
Sbjct: 597 MITGYSQHGMGKQAIEIFDDILNKGAKPDYISYVAVLSGCSHSGLVEEGKFYFDMM---- 652
Query: 61 FQQDAFVQTGL------IDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLN 114
++D + GL +D+ + + ++ ++DEMP++ + V W +++SA N
Sbjct: 653 -KRDHNISPGLEHFSCMVDLLGRAGHLIEAKNLIDEMPMKPTAEV-WGALLSACKTHGNN 710
Query: 115 DEAILVLKEMWVL 127
D A L K ++ L
Sbjct: 711 DLAELAAKHLFDL 723
>gi|188509980|gb|ACD56662.1| putative pentatricopeptide [Gossypium arboreum]
Length = 805
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 205/639 (32%), Positives = 330/639 (51%), Gaps = 75/639 (11%)
Query: 32 TFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEM 91
T+ VL+ CA + S DGK+VHS + D + L+ Y+ C D R+V D M
Sbjct: 101 TYGSVLQLCAGLKSFTDGKKVHSIIKSNSVGVDGALGLKLVSFYATCGDLKEGRRVFDTM 160
Query: 92 PVR-------------------------------------------------LRSVVSWN 102
+ R V+SWN
Sbjct: 161 EKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEGKRPESAFELFDKLCDRDVISWN 220
Query: 103 SIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGL-- 160
S+IS + L + + + K+M LG+++ +T +SV+ GC+ +S+ V+ L +
Sbjct: 221 SMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKS 280
Query: 161 -LNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLC 219
I +N+++ MY+K G ++ A +F+++GE ++VSWT++I GY G + A L
Sbjct: 281 SFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAIKLL 340
Query: 220 NQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKC 279
QM + V D+V +++ CA+ G+L +H + + + + N L+ MY KC
Sbjct: 341 QQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNMESNLFVCNALMDMYAKC 400
Query: 280 GDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTL 339
G +E A VF ++ K + W +MIG ++P+ T+A L
Sbjct: 401 GSMEAANSVFSTMVVKDIISWNTMIG---------------------ELKPDSRTMACVL 439
Query: 340 SACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLA 399
ACA L +L +GKEI YI+ NG S+R V +L+ ++ KCG + A+ +F+ +P KDL
Sbjct: 440 PACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLV 499
Query: 400 VWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKS 459
W+ MI GY +HG G++A+ F +M+ G++PD V + SIL ACSHSG+++ G FF
Sbjct: 500 SWTVMIAGYGMHGYGNEAIATFNEMRDA-GIEPDEVSFISILYACSHSGLLEQGWRFFYI 558
Query: 460 MQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVE 519
M+++F IEP +EHY C+VDLL R G A + + +P+ A +W LL C +H++E
Sbjct: 559 MKNDFNIEPKLEHYACMVDLLSRTGNLSKAYEFMETLPIAPDATIWGALLCGCRNYHDIE 618
Query: 520 LGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEID 579
L E A+ + L P +TG Y+L+AN++ A W+E R + + L K PG S +EI
Sbjct: 619 LAEKVAERVFELEPENTGYYVLLANIYAEAEKWEEVKRLREKIGKQGLRKNPGCSWIEIK 678
Query: 580 GSVQVFVAGDRSHHL-SVDIRKTLKELHIKLLEAGYIAE 617
G V +FV+G+ S H S +I LK++ K+ E G+ +
Sbjct: 679 GKVNLFVSGNNSSHPHSKNIESLLKKMRRKMKEEGHFPK 717
Score = 194 bits (492), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 126/414 (30%), Positives = 204/414 (49%), Gaps = 32/414 (7%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI +NG E L Y M+ G+ + T VL CAN ++ GK VHS +K
Sbjct: 222 MISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSS 281
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F++ L+DMYSKC D + +V ++M R+VVSW S+I+ ++R +D AI +
Sbjct: 282 FERRINFSNTLLDMYSKCGDLDGALRVFEKMGE--RNVVSWTSMIAGYTRDGRSDGAIKL 339
Query: 121 LKEMWVLGLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
L++M G++L S++ C S G +H + K + + + + N++M MYA
Sbjct: 340 LQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYI-KANNMESNLFVCNALMDMYA 398
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K G + A S+F + I+SW T+IG + PD
Sbjct: 399 KCGSMEAANSVFSTMVVKDIISWNTMIG---------------------ELKPDSRTMAC 437
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
++ CA + L +H +L++GY+++ + N LV +Y KCG L LAR +FD + K
Sbjct: 438 VLPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKD 497
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEE 356
+ WT MI GY GY +EA+ F + + P+E + + L AC+ G L +G
Sbjct: 498 LVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWRF-F 556
Query: 357 YIVLN--GLESNRQVQTSLIHMFSKCGRINKAKEVFERVP-DKDLAVWSAMING 407
YI+ N +E + ++ + S+ G ++KA E E +P D +W A++ G
Sbjct: 557 YIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYEFMETLPIAPDATIWGALLCG 610
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/223 (21%), Positives = 102/223 (45%), Gaps = 19/223 (8%)
Query: 292 VLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKG 351
++ V + + I + QLG A+ L K+ + T + L CA L S + G
Sbjct: 61 TIDHQVTDYNAKILHFCQLGDLENAMELICMCQKSELETK--TYGSVLQLCAGLKSFTDG 118
Query: 352 KEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIH 411
K++ I N + + + L+ ++ CG + + + VF+ + K++ +W+ M++ YA
Sbjct: 119 KKVHSIIKSNSVGVDGALGLKLVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKI 178
Query: 412 GMGDQALNLFYKM--QHVEGLKP-------------DAVVYTSILSACSHSGMVDDGLSF 456
G +++ LF M + +EG +P D + + S++S +G+ + GL
Sbjct: 179 GDFKESICLFKIMVEKGIEGKRPESAFELFDKLCDRDVISWNSMISGYVSNGLTERGLGI 238
Query: 457 FKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVE 499
+K M GI+ + + ++ +G L K +H + ++
Sbjct: 239 YKQMMY-LGIDVDLATIISVLVGCANSGTLSLG-KAVHSLAIK 279
>gi|224122590|ref|XP_002330519.1| predicted protein [Populus trichocarpa]
gi|222872453|gb|EEF09584.1| predicted protein [Populus trichocarpa]
Length = 726
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 202/617 (32%), Positives = 337/617 (54%), Gaps = 8/617 (1%)
Query: 9 GSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQ 68
G ++ L + M + + FT VLK CAN S+ +GK +H+ L+ G + D F+
Sbjct: 30 GDGKKVLKLFCKMKECETKFSKFTLSTVLKGCANTGSLREGKVLHALALRSGCEIDEFLG 89
Query: 69 TGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLG 128
L+DMYSKC + KV + +R VV+W+++I+ + EA + M G
Sbjct: 90 CSLVDMYSKCGTVYDALKVFTK--IRNPDVVAWSAMITGLDQQGHGQEAAELFHLMRRKG 147
Query: 129 LELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEA 184
+ T S+VS + R G S+H C+ K G ++ + ++N ++ MY K V +
Sbjct: 148 ARPNQFTLSSLVSTATNMGDLRYGQSIHGCICKYGFESDNL-VSNPLIMMYMKSRCVEDG 206
Query: 185 RSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQV 244
+F+ + +VSW ++ G+ + + QM P++ F++++ C+ +
Sbjct: 207 NKVFEAMTNPDLVSWNALLSGFYDSQTCGRGPRIFYQMLLEGFKPNMFTFISVLRSCSSL 266
Query: 245 GNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMI 304
+ +H+ ++K+ +++D + LV MY K LE A FD ++ + +F WT +I
Sbjct: 267 LDPEFGKQVHAHIIKNSSDDDDFVGTALVDMYAKARCLEDAGVAFDRLVNRDIFSWTVII 326
Query: 305 GGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLE 364
GYAQ +AV F+++ + ++PNE TLA+ LS C+ + +L G+++ V G
Sbjct: 327 SGYAQTDQAEKAVKYFRQMQREGIKPNEYTLASCLSGCSHMATLENGRQLHAVAVKAGHF 386
Query: 365 SNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKM 424
+ V ++L+ ++ KCG + A+ +F+ + +D+ W+ +I+GY+ HG G++AL F +M
Sbjct: 387 GDIFVGSALVDLYGKCGCMEHAEAIFKGLISRDIVSWNTIISGYSQHGQGEKALEAF-RM 445
Query: 425 QHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAG 484
EG+ PD + +LSACS G+V++G F SM +GI PSIEHY C+VD+LGRAG
Sbjct: 446 MLSEGIMPDEATFIGVLSACSFMGLVEEGKKRFDSMSKIYGINPSIEHYACMVDILGRAG 505
Query: 485 RFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMAN 544
+F+ I EM + + +W +L AC H NV+ GE AAK L + P +YIL++N
Sbjct: 506 KFNEVKIFIEEMNLTPYSLIWETVLGACKLHGNVDFGEKAAKKLFEMEPMMDSSYILLSN 565
Query: 545 LFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKE 604
+F S G W + R LM R + KEPG S VE+DG V VF++ D SH +I L +
Sbjct: 566 IFASKGRWDDVRNIRALMTSRGIKKEPGCSWVEVDGQVHVFLSQDGSHPKIREIYAKLDK 625
Query: 605 LHIKLLEAGYIAEADIV 621
L L+ GY+ + ++V
Sbjct: 626 LGQSLMSIGYVPKTEVV 642
Score = 172 bits (435), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 126/522 (24%), Positives = 230/522 (44%), Gaps = 59/522 (11%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI G +E + M + G N FT ++ N+ + G+ +H + K G
Sbjct: 123 MITGLDQQGHGQEAAELFHLMRRKGARPNQFTLSSLVSTATNMGDLRYGQSIHGCICKYG 182
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F+ D V LI MY K KV + M +VSWN+++S + +
Sbjct: 183 FESDNLVSNPLIMMYMKSRCVEDGNKVFEAMTN--PDLVSWNALLSGFYDSQTCGRGPRI 240
Query: 121 LKEMWVLGLELSASTFVSVVSGCSF----RQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
+M + G + + TF+SV+ CS G +H + K +++ + +++ MYA
Sbjct: 241 FYQMLLEGFKPNMFTFISVLRSCSSLLDPEFGKQVHAHIIKNSSDDDDF-VGTALVDMYA 299
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K + +A FD + I SWT II GY +A QM+R + P+ +
Sbjct: 300 KARCLEDAGVAFDRLVNRDIFSWTVIISGYAQTDQAEKAVKYFRQMQREGIKPNEYTLAS 359
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
+ GC+ + L +H++ +K+G+ + + + LV +Y KCG +E A +F ++ +
Sbjct: 360 CLSGCSHMATLENGRQLHAVAVKAGHFGDIFVGSALVDLYGKCGCMEHAEAIFKGLISRD 419
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKE-IE 355
+ W ++I GY+Q G +A+ F+ +L + P+EAT LSAC+ +G + +GK+ +
Sbjct: 420 IVSWNTIISGYSQHGQGEKALEAFRMMLSEGIMPDEATFIGVLSACSFMGLVEEGKKRFD 479
Query: 356 EYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGD 415
+ G+ + + ++ + + G+ N+ K E +
Sbjct: 480 SMSKIYGINPSIEHYACMVDILGRAGKFNEVKIFIEEM---------------------- 517
Query: 416 QALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIE-HYL 474
L P ++++ ++L AC G VD G K+ + F +EP ++ Y+
Sbjct: 518 -------------NLTPYSLIWETVLGACKLHGNVDFGE---KAAKKLFEMEPMMDSSYI 561
Query: 475 CLVDLLGRAGRFD--------LALKTIHEMP----VEVQAQV 504
L ++ GR+D + + I + P VEV QV
Sbjct: 562 LLSNIFASKGRWDDVRNIRALMTSRGIKKEPGCSWVEVDGQV 603
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 81/262 (30%), Positives = 133/262 (50%), Gaps = 1/262 (0%)
Query: 184 ARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQ 243
A +F + E + VSW ++ GY +G+ + L +M+ ++ GCA
Sbjct: 4 AERLFFGMPEKNGVSWNALLNGYAQLGDGKKVLKLFCKMKECETKFSKFTLSTVLKGCAN 63
Query: 244 VGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSM 303
G+L +H+L L+SG ++ L LV MY+KCG + A +VF + V W++M
Sbjct: 64 TGSLREGKVLHALALRSGCEIDEFLGCSLVDMYSKCGTVYDALKVFTKIRNPDVVAWSAM 123
Query: 304 IGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGL 363
I G Q G+ EA LF + + RPN+ TL++ +S +G L G+ I I G
Sbjct: 124 ITGLDQQGHGQEAAELFHLMRRKGARPNQFTLSSLVSTATNMGDLRYGQSIHGCICKYGF 183
Query: 364 ESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYK 423
ES+ V LI M+ K + +VFE + + DL W+A+++G+ + +FY+
Sbjct: 184 ESDNLVSNPLIMMYMKSRCVEDGNKVFEAMTNPDLVSWNALLSGFYDSQTCGRGPRIFYQ 243
Query: 424 MQHVEGLKPDAVVYTSILSACS 445
M +EG KP+ + S+L +CS
Sbjct: 244 ML-LEGFKPNMFTFISVLRSCS 264
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 59/174 (33%), Positives = 101/174 (58%), Gaps = 1/174 (0%)
Query: 282 LELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSA 341
+ELA R+F + EK+ W +++ GYAQLG + + LF ++ + + ++ TL+T L
Sbjct: 1 MELAERLFFGMPEKNGVSWNALLNGYAQLGDGKKVLKLFCKMKECETKFSKFTLSTVLKG 60
Query: 342 CAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVW 401
CA GSL +GK + + +G E + + SL+ M+SKCG + A +VF ++ + D+ W
Sbjct: 61 CANTGSLREGKVLHALALRSGCEIDEFLGCSLVDMYSKCGTVYDALKVFTKIRNPDVVAW 120
Query: 402 SAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLS 455
SAMI G G G +A LF+ M+ +G +P+ +S++S ++ G + G S
Sbjct: 121 SAMITGLDQQGHGQEAAELFHLMRR-KGARPNQFTLSSLVSTATNMGDLRYGQS 173
>gi|297736528|emb|CBI25399.3| unnamed protein product [Vitis vinifera]
Length = 846
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 204/616 (33%), Positives = 344/616 (55%), Gaps = 11/616 (1%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI ST +G F + + ML +G+ + F + ++++C ++S+ GK VH+ ++ G
Sbjct: 138 MIVGSTEHGLFFDGFKFFCEMLNSGILPDKFAYSAIIQSCIGLDSLELGKMVHAQIVMRG 197
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F FV T L++MY+K S V + M + VSWN++IS + L+ EA +
Sbjct: 198 FATHIFVSTSLLNMYAKLGSIEDSYWVFNMMTEH--NQVSWNAMISGCTSNGLHLEAFDL 255
Query: 121 LKEMWVLGLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
M + T VSV G + C +LG+ N + + +++ MY+
Sbjct: 256 FVRMKNGACTPNMYTLVSVSKAVGKLVDVNMGKEVQNCASELGIEGN-VLVGTALIDMYS 314
Query: 177 KFGKVNEARSIFDE--IGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVF 234
K G +++ARS+FD I W +I GY G EA L QM + +T DL +
Sbjct: 315 KCGSLHDARSVFDTNFINCGVNTPWNAMISGYSQSGCSQEALELYVQMCQNGITSDLYTY 374
Query: 235 LNLILGCAQVGNLFLALSMHSLLLKSGYN-NEDPLDNLLVSMYTKCGDLELARRVFDAVL 293
++ A +L +H ++LK G + ++N + Y+KCG LE R+VFD +
Sbjct: 375 CSVFNAIAASKSLQFGRVVHGMVLKCGLDLMVVSVNNAIADAYSKCGFLEDVRKVFDRME 434
Query: 294 EKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKE 353
E+ + WT+++ Y+Q EA+ F + + PN+ T ++ L +CA L L G++
Sbjct: 435 ERDIVSWTTLVTAYSQSSLGEEALATFCLMREEGFAPNQFTFSSVLISCASLCFLEYGRQ 494
Query: 354 IEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGM 413
+ + GL++ + ++++LI M++KCG I +A +VF+++ + D+ W+A+I+GYA HG+
Sbjct: 495 VHGLLCKAGLDTEKCIESALIDMYAKCGSITEAGKVFDKISNPDIVSWTAIISGYAQHGL 554
Query: 414 GDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHY 473
+ AL LF +M+ + G+K +AV +L ACSH GMV++GL +F+ M+ +G+ P +EHY
Sbjct: 555 VEDALQLFRRME-LSGIKANAVTLLCVLFACSHGGMVEEGLFYFQQMEDGYGVVPEMEHY 613
Query: 474 LCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNP 533
C++DLLGR GR D A++ I +MP+E VW LL C H NVELGE AA+ +L++ P
Sbjct: 614 ACIIDLLGRVGRLDDAMEFIRKMPMEPNEMVWQTLLGGCRVHGNVELGEIAARKILSIRP 673
Query: 534 GSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHH 593
+ Y+L++N + G +++ + R +M D+ + KEPG+S + + G V F +GD+ H
Sbjct: 674 EYSATYVLLSNTYIETGSYEDGLSLRNVMKDQGVKKEPGYSWISVKGRVHKFYSGDQQHP 733
Query: 594 LSVDIRKTLKELHIKL 609
+I L+EL K+
Sbjct: 734 QKKEIYVKLEELREKI 749
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 131/496 (26%), Positives = 238/496 (47%), Gaps = 21/496 (4%)
Query: 36 VLKACANINSIWDGKRVHSHVLKVGFQ-QDAFVQ-TGLIDMYSKCSDFVSSRKVLDEMPV 93
VL+ CA SI + K VH VLK F+ +D V +YSKCS+F ++ V DEMP
Sbjct: 70 VLRDCAEKGSIREAKAVHGLVLKSNFEDKDLMVLFNHAAHVYSKCSEFRAACGVFDEMP- 128
Query: 94 RLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGC----SFRQGI 149
R+V SW +I + L + EM G+ + +++ C S G
Sbjct: 129 -QRNVFSWTVMIVGSTEHGLFFDGFKFFCEMLNSGILPDKFAYSAIIQSCIGLDSLELGK 187
Query: 150 SMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNV 209
+H + G + I ++ S+++MYAK G + ++ +F+ + E + VSW +I G +
Sbjct: 188 MVHAQIVMRGFATH-IFVSTSLLNMYAKLGSIEDSYWVFNMMTEHNQVSWNAMISGCTSN 246
Query: 210 GNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLD 269
G EAF L +M+ + TP++ +++ ++ ++ + + + + G +
Sbjct: 247 GLHLEAFDLFVRMKNGACTPNMYTLVSVSKAVGKLVDVNMGKEVQNCASELGIEGNVLVG 306
Query: 270 NLLVSMYTKCGDLELARRVFDAVLEKSVF--LWTSMIGGYAQLGYPSEAVNLFKRLLKTS 327
L+ MY+KCG L AR VFD W +MI GY+Q G EA+ L+ ++ +
Sbjct: 307 TALIDMYSKCGSLHDARSVFDTNFINCGVNTPWNAMISGYSQSGCSQEALELYVQMCQNG 366
Query: 328 VRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLE-SNRQVQTSLIHMFSKCGRINKA 386
+ + T + +A A SL G+ + ++ GL+ V ++ +SKCG +
Sbjct: 367 ITSDLYTYCSVFNAIAASKSLQFGRVVHGMVLKCGLDLMVVSVNNAIADAYSKCGFLEDV 426
Query: 387 KEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSH 446
++VF+R+ ++D+ W+ ++ Y+ +G++AL F M+ EG P+ ++S+L +C+
Sbjct: 427 RKVFDRMEERDIVSWTTLVTAYSQSSLGEEALATFCLMRE-EGFAPNQFTFSSVLISCAS 485
Query: 447 SGMVDDGLSFFKSM-QSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEM--PVEVQAQ 503
++ G + ++ E IE L+D+ + G A K ++ P V
Sbjct: 486 LCFLEYGRQVHGLLCKAGLDTEKCIES--ALIDMYAKCGSITEAGKVFDKISNPDIVS-- 541
Query: 504 VWAPLLSACMKHHNVE 519
W ++S +H VE
Sbjct: 542 -WTAIISGYAQHGLVE 556
>gi|49333376|gb|AAT64016.1| putative pentatricopeptide repeat protein [Gossypium hirsutum]
Length = 805
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 205/639 (32%), Positives = 330/639 (51%), Gaps = 75/639 (11%)
Query: 32 TFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEM 91
T+ VL+ CA + S DGK+VHS + D + L+ Y+ C D R+V D M
Sbjct: 101 TYSSVLQLCAGLKSFTDGKKVHSIIKSNSVGVDEALGLKLVSFYATCGDLKEGRRVFDTM 160
Query: 92 PVR-------------------------------------------------LRSVVSWN 102
+ R V+SWN
Sbjct: 161 EKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEGKRPESAFELFDKLCDRDVISWN 220
Query: 103 SIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGL-- 160
S+IS + L + + + K+M LG+++ +T +SV+ GC+ +S+ V+ L +
Sbjct: 221 SMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKS 280
Query: 161 -LNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLC 219
I +N+++ MY+K G ++ A +F+++GE ++VSWT++I GY G + A L
Sbjct: 281 SFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAIKLL 340
Query: 220 NQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKC 279
QM + V D+V +++ CA+ G+L +H + + + + N L+ MY KC
Sbjct: 341 QQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNMESNLFVCNALMDMYAKC 400
Query: 280 GDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTL 339
G +E A VF ++ K + W +MIG ++P+ T+A L
Sbjct: 401 GSMEAANSVFSTMVVKDIISWNTMIG---------------------ELKPDSRTMACVL 439
Query: 340 SACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLA 399
ACA L +L +GKEI YI+ NG S+R V +L+ ++ KCG + A+ +F+ +P KDL
Sbjct: 440 PACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLV 499
Query: 400 VWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKS 459
W+ MI GY +HG G++A+ F +M+ G++PD V + SIL ACSHSG+++ G FF
Sbjct: 500 SWTVMIAGYGMHGYGNEAIATFNEMRDA-GIEPDEVSFISILYACSHSGLLEQGWRFFYI 558
Query: 460 MQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVE 519
M+++F IEP +EHY C+VDLL R G A + I +P+ A +W LL C +H++E
Sbjct: 559 MKNDFNIEPKLEHYACMVDLLSRTGNLSKAYEFIETLPIAPDATIWGALLCGCRNYHDIE 618
Query: 520 LGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEID 579
L E A+ + L P ++G Y+L+AN++ A W+E R + + L K PG S +EI
Sbjct: 619 LAEKVAERVFELEPENSGYYVLLANIYAEAEKWEEVKRLREKIGKQGLRKNPGCSWIEIK 678
Query: 580 GSVQVFVAGDRSHHL-SVDIRKTLKELHIKLLEAGYIAE 617
G V +FV+G+ S H S +I LK++ K+ E G+ +
Sbjct: 679 GKVNLFVSGNNSSHPHSKNIESLLKKMRRKMKEEGHFPK 717
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 126/414 (30%), Positives = 204/414 (49%), Gaps = 32/414 (7%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI +NG E L Y M+ G+ + T VL CAN ++ GK VHS +K
Sbjct: 222 MISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSS 281
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F++ L+DMYSKC D + +V ++M R+VVSW S+I+ ++R +D AI +
Sbjct: 282 FERRINFSNTLLDMYSKCGDLDGALRVFEKMGE--RNVVSWTSMIAGYTRDGRSDGAIKL 339
Query: 121 LKEMWVLGLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
L++M G++L S++ C S G +H + K + + + + N++M MYA
Sbjct: 340 LQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYI-KANNMESNLFVCNALMDMYA 398
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K G + A S+F + I+SW T+IG + PD
Sbjct: 399 KCGSMEAANSVFSTMVVKDIISWNTMIG---------------------ELKPDSRTMAC 437
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
++ CA + L +H +L++GY+++ + N LV +Y KCG L LAR +FD + K
Sbjct: 438 VLPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKD 497
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEE 356
+ WT MI GY GY +EA+ F + + P+E + + L AC+ G L +G
Sbjct: 498 LVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWRF-F 556
Query: 357 YIVLN--GLESNRQVQTSLIHMFSKCGRINKAKEVFERVP-DKDLAVWSAMING 407
YI+ N +E + ++ + S+ G ++KA E E +P D +W A++ G
Sbjct: 557 YIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYEFIETLPIAPDATIWGALLCG 610
>gi|15226200|ref|NP_180329.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75216862|sp|Q9ZUW3.1|PP172_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g27610
gi|3860271|gb|AAC73039.1| putative selenium-binding protein [Arabidopsis thaliana]
gi|330252926|gb|AEC08020.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 868
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 211/625 (33%), Positives = 349/625 (55%), Gaps = 18/625 (2%)
Query: 3 RNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQ 62
RNS N +E L+ + M G NSFTF L A G +VH+ V+K G
Sbjct: 171 RNSMN----DEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLD 226
Query: 63 QDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLK 122
+ V LI++Y KC + +R + D+ V+ SVV+WNS+IS ++ L+ EA+ +
Sbjct: 227 KTIPVSNSLINLYLKCGNVRKARILFDKTEVK--SVVTWNSMISGYAANGLDLEALGMFY 284
Query: 123 EMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKF 178
M + + LS S+F SV+ C+ R +HC V K G L ++ + ++M Y+K
Sbjct: 285 SMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQ-NIRTALMVAYSKC 343
Query: 179 GKVNEARSIFDEIGET-SIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNL 237
+ +A +F EIG ++VSWT +I G++ EA L ++M+R V P+ + ++
Sbjct: 344 TAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTY-SV 402
Query: 238 ILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSV 297
IL V +H+ ++K+ Y + L+ Y K G +E A +VF + +K +
Sbjct: 403 ILTALPV---ISPSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDI 459
Query: 298 FLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAEL-GSLSKGKEIEE 356
W++M+ GYAQ G A+ +F L K ++PNE T ++ L+ CA S+ +GK+
Sbjct: 460 VAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHG 519
Query: 357 YIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQ 416
+ + + L+S+ V ++L+ M++K G I A+EVF+R +KDL W++MI+GYA HG +
Sbjct: 520 FAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMK 579
Query: 417 ALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCL 476
AL++F +M+ +K D V + + +AC+H+G+V++G +F M + I P+ EH C+
Sbjct: 580 ALDVFKEMKK-RKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCM 638
Query: 477 VDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGST 536
VDL RAG+ + A+K I MP + +W +L+AC H ELG AA+ ++ + P +
Sbjct: 639 VDLYSRAGQLEKAMKVIENMPNPAGSTIWRTILAACRVHKKTELGRLAAEKIIAMKPEDS 698
Query: 537 GNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSV 596
Y+L++N++ +G W+E A R LM++R + KEPG+S +E+ F+AGDRSH L
Sbjct: 699 AAYVLLSNMYAESGDWQERAKVRKLMNERNVKKEPGYSWIEVKNKTYSFLAGDRSHPLKD 758
Query: 597 DIRKTLKELHIKLLEAGYIAEADIV 621
I L++L +L + GY + V
Sbjct: 759 QIYMKLEDLSTRLKDLGYEPDTSYV 783
Score = 226 bits (575), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 154/521 (29%), Positives = 264/521 (50%), Gaps = 26/521 (4%)
Query: 6 TNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDA 65
+ +G +E + ++ + G+ + F VLK A + G+++H +K GF D
Sbjct: 69 SRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKVSATLCDELFGRQLHCQCIKFGFLDDV 128
Query: 66 FVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMW 125
V T L+D Y K S+F RKV DEM + R+VV+W ++IS ++R +NDE + + M
Sbjct: 129 SVGTSLVDTYMKGSNFKDGRKVFDEM--KERNVVTWTTLISGYARNSMNDEVLTLFMRMQ 186
Query: 126 VLGLELSASTFVSVV-----SGCSFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGK 180
G + ++ TF + + G R G+ +H V K G L+ IP++NS++++Y K G
Sbjct: 187 NEGTQPNSFTFAAALGVLAEEGVGGR-GLQVHTVVVKNG-LDKTIPVSNSLINLYLKCGN 244
Query: 181 VNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILG 240
V +AR +FD+ S+V+W ++I GY G EA G+ MR V F ++I
Sbjct: 245 VRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKL 304
Query: 241 CAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAV-LEKSVFL 299
CA + L +H ++K G+ + + L+ Y+KC + A R+F + +V
Sbjct: 305 CANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVS 364
Query: 300 WTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIV 359
WT+MI G+ Q EAV+LF + + VRPNE T + L+A + E+ +V
Sbjct: 365 WTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPVISP----SEVHAQVV 420
Query: 360 LNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALN 419
E + V T+L+ + K G++ +A +VF + DKD+ WSAM+ GYA G + A+
Sbjct: 421 KTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIK 480
Query: 420 LFYKMQHVEGLKPDAVVYTSILSACSHSGM-VDDGLSFFKSMQSNFGIEPSIEHYLC--- 475
+F ++ G+KP+ ++SIL+ C+ + + G F F I+ ++ LC
Sbjct: 481 MFGELTK-GGIKPNEFTFSSILNVCAATNASMGQGKQF-----HGFAIKSRLDSSLCVSS 534
Query: 476 -LVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKH 515
L+ + + G + A + + + E W ++S +H
Sbjct: 535 ALLTMYAKKGNIESA-EEVFKRQREKDLVSWNSMISGYAQH 574
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 108/370 (29%), Positives = 196/370 (52%), Gaps = 9/370 (2%)
Query: 79 SDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVS 138
S ++ + D+ P R R S+ S++ SR EA + + LG+E+ S F S
Sbjct: 41 SRLYNAHNLFDKSPGRDRE--SYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSS 98
Query: 139 VV----SGCSFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGET 194
V+ + C G +HC K G L+ ++ + S++ Y K + R +FDE+ E
Sbjct: 99 VLKVSATLCDELFGRQLHCQCIKFGFLD-DVSVGTSLVDTYMKGSNFKDGRKVFDEMKER 157
Query: 195 SIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMH 254
++V+WTT+I GY +E L +M+ P+ F + A+ G L +H
Sbjct: 158 NVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVH 217
Query: 255 SLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPS 314
++++K+G + P+ N L+++Y KCG++ AR +FD KSV W SMI GYA G
Sbjct: 218 TVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDL 277
Query: 315 EAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLI 374
EA+ +F + VR +E++ A+ + CA L L +++ +V G ++ ++T+L+
Sbjct: 278 EALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALM 337
Query: 375 HMFSKCGRINKAKEVFERVP-DKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPD 433
+SKC + A +F+ + ++ W+AMI+G+ + ++A++LF +M+ +G++P+
Sbjct: 338 VAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKR-KGVRPN 396
Query: 434 AVVYTSILSA 443
Y+ IL+A
Sbjct: 397 EFTYSVILTA 406
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 106/414 (25%), Positives = 205/414 (49%), Gaps = 5/414 (1%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI NG E L + SM V + +F V+K CAN+ + +++H V+K G
Sbjct: 266 MISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYG 325
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F D ++T L+ YSKC+ + + ++ E+ + +VVSW ++IS + +EA+ +
Sbjct: 326 FLFDQNIRTALMVAYSKCTAMLDALRLFKEIGC-VGNVVSWTAMISGFLQNDGKEEAVDL 384
Query: 121 LKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGK 180
EM G+ + T+ +++ +H V K + + +++ Y K GK
Sbjct: 385 FSEMKRKGVRPNEFTYSVILTALPVISPSEVHAQVVKTNYERSST-VGTALLDAYVKLGK 443
Query: 181 VNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILG 240
V EA +F I + IV+W+ ++ GY G A + ++ + + P+ F +++
Sbjct: 444 VEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNV 503
Query: 241 CAQV-GNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFL 299
CA ++ H +KS ++ + + L++MY K G++E A VF EK +
Sbjct: 504 CAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVS 563
Query: 300 WTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIV 359
W SMI GYAQ G +A+++FK + K V+ + T +AC G + +G++ + +V
Sbjct: 564 WNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMV 623
Query: 360 LN-GLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDK-DLAVWSAMINGYAIH 411
+ + ++ + ++ ++S+ G++ KA +V E +P+ +W ++ +H
Sbjct: 624 RDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIENMPNPAGSTIWRTILAACRVH 677
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 77/274 (28%), Positives = 144/274 (52%), Gaps = 6/274 (2%)
Query: 178 FGKVNEAR-----SIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLV 232
FG V+ +R ++FD+ S+ +++ G+ G EA L + R+ + D
Sbjct: 35 FGTVSSSRLYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCS 94
Query: 233 VFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAV 292
+F +++ A + + +H +K G+ ++ + LV Y K + + R+VFD +
Sbjct: 95 IFSSVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEM 154
Query: 293 LEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGK 352
E++V WT++I GYA+ E + LF R+ +PN T A L AE G +G
Sbjct: 155 KERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGL 214
Query: 353 EIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHG 412
++ +V NGL+ V SLI+++ KCG + KA+ +F++ K + W++MI+GYA +G
Sbjct: 215 QVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANG 274
Query: 413 MGDQALNLFYKMQHVEGLKPDAVVYTSILSACSH 446
+ +AL +FY M+ + ++ + S++ C++
Sbjct: 275 LDLEALGMFYSMR-LNYVRLSESSFASVIKLCAN 307
>gi|297734119|emb|CBI15366.3| unnamed protein product [Vitis vinifera]
Length = 783
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 208/590 (35%), Positives = 334/590 (56%), Gaps = 11/590 (1%)
Query: 35 LVLKACANINSIWDGKRVHSHV-LKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPV 93
++L+AC I G+R+H V F D + T +I MYS C SR V D++
Sbjct: 110 VLLQACGQRKDIEVGRRLHEMVSASTQFCNDFVLNTRIITMYSMCGSPSDSRMVFDKL-- 167
Query: 94 RLRSVVSWNSIISAHSRACLNDEAILVLKEMW-VLGLELSASTFVSVVSGCS----FRQG 148
R +++ WN+I+SA++R L ++A+ + E+ V + T V+ C+ G
Sbjct: 168 RRKNLFQWNAIVSAYTRNELFEDAMSIFSELISVTEHKPDNFTLPCVIKACAGLLDLGLG 227
Query: 149 ISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEA-RSIFDEIGETSIVSWTTIIGGYV 207
+H K+ L++ ++ + N++++MY K G V EA + +FD + ++ SW ++ GY
Sbjct: 228 QIIHGMATKMDLVS-DVFVGNALIAMYGKCGLVEEAVKRVFDLMDTKTVSSWNALLCGYA 286
Query: 208 NVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDP 267
+ +A L QM + PD +L+L C+++ +L +H L++G +
Sbjct: 287 QNSDPRKALDLYLQMTDSGLDPDWFTIGSLLLACSRMKSLHYGEEIHGFALRNGLAVDPF 346
Query: 268 LDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTS 327
+ L+S+Y CG A+ +FD + +S+ W MI GY+Q G P EA+NLF+++L
Sbjct: 347 IGISLLSLYICCGKPFAAQVLFDGMEHRSLVSWNVMIAGYSQNGLPDEAINLFRQMLSDG 406
Query: 328 VRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAK 387
++P E + AC++L +L GKE+ + + L + V +S+I M++K G I ++
Sbjct: 407 IQPYEIAIMCVCGACSQLSALRLGKELHCFALKAHLTEDIFVSSSIIDMYAKGGCIGLSQ 466
Query: 388 EVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHS 447
+F+R+ +KD+A W+ +I GY IHG G +AL LF KM + GLKPD +T IL ACSH+
Sbjct: 467 RIFDRLREKDVASWNVIIAGYGIHGRGKEALELFEKMLRL-GLKPDDFTFTGILMACSHA 525
Query: 448 GMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAP 507
G+V+DGL +F M + IEP +EHY C+VD+LGRAGR D AL+ I EMP + +++W+
Sbjct: 526 GLVEDGLEYFNQMLNLHNIEPKLEHYTCVVDMLGRAGRIDDALRLIEEMPGDPDSRIWSS 585
Query: 508 LLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRL 567
LLS+C H N+ LGE A LL L P NY+L++NLF +G W + RG M D L
Sbjct: 586 LLSSCRIHGNLGLGEKVANKLLELEPEKPENYVLISNLFAGSGKWDDVRRVRGRMKDIGL 645
Query: 568 TKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKELHIKLLEAGYIAE 617
K+ G S +E+ G V F+ GD ++R+T + L +K+ GY +
Sbjct: 646 QKDAGCSWIEVGGKVHNFLIGDEMLPELEEVRETWRRLEVKISSIGYTPD 695
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 135/458 (29%), Positives = 231/458 (50%), Gaps = 19/458 (4%)
Query: 6 TNNGSFEETLSTYSSMLQTGVHG-NSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQD 64
T N FE+ +S +S ++ H ++FT P V+KACA + + G+ +H K+ D
Sbjct: 183 TRNELFEDAMSIFSELISVTEHKPDNFTLPCVIKACAGLLDLGLGQIIHGMATKMDLVSD 242
Query: 65 AFVQTGLIDMYSKCSDFVSS-RKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKE 123
FV LI MY KC + ++V D M ++V SWN+++ +++ +A+ + +
Sbjct: 243 VFVGNALIAMYGKCGLVEEAVKRVFDLMDT--KTVSSWNALLCGYAQNSDPRKALDLYLQ 300
Query: 124 MWVLGLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFG 179
M GL+ T S++ C S G +H + GL + + S++S+Y G
Sbjct: 301 MTDSGLDPDWFTIGSLLLACSRMKSLHYGEEIHGFALRNGLAVDPF-IGISLLSLYICCG 359
Query: 180 KVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLIL 239
K A+ +FD + S+VSW +I GY G +EA L QM + P + + +
Sbjct: 360 KPFAAQVLFDGMEHRSLVSWNVMIAGYSQNGLPDEAINLFRQMLSDGIQPYEIAIMCVCG 419
Query: 240 GCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFL 299
C+Q+ L L +H LK+ + + + ++ MY K G + L++R+FD + EK V
Sbjct: 420 ACSQLSALRLGKELHCFALKAHLTEDIFVSSSIIDMYAKGGCIGLSQRIFDRLREKDVAS 479
Query: 300 WTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKE-IEEYI 358
W +I GY G EA+ LF+++L+ ++P++ T L AC+ G + G E + +
Sbjct: 480 WNVIIAGYGIHGRGKEALELFEKMLRLGLKPDDFTFTGILMACSHAGLVEDGLEYFNQML 539
Query: 359 VLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVP-DKDLAVWSAMINGYAIH---GMG 414
L+ +E + T ++ M + GRI+ A + E +P D D +WS++++ IH G+G
Sbjct: 540 NLHNIEPKLEHYTCVVDMLGRAGRIDDALRLIEEMPGDPDSRIWSSLLSSCRIHGNLGLG 599
Query: 415 DQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDD 452
++ N K+ +E KP+ V S L A SG DD
Sbjct: 600 EKVAN---KLLELEPEKPENYVLISNLFA--GSGKWDD 632
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 96/417 (23%), Positives = 176/417 (42%), Gaps = 52/417 (12%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI + NG +E ++ + ML G+ V AC+ ++++ GK +H LK
Sbjct: 382 MIAGYSQNGLPDEAINLFRQMLSDGIQPYEIAIMCVCGACSQLSALRLGKELHCFALKAH 441
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+D FV + +IDMY+K S+++ D + R + V SWN II+ + EA+ +
Sbjct: 442 LTEDIFVSSSIIDMYAKGGCIGLSQRIFDRL--REKDVASWNVIIAGYGIHGRGKEALEL 499
Query: 121 LKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGK 180
++M LGL+ TF ++ CS GL+ + + N +++++ K
Sbjct: 500 FEKMLRLGLKPDDFTFTGILMACS------------HAGLVEDGLEYFNQMLNLHNIEPK 547
Query: 181 VNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILG 240
+ + D +G G +++A L + M PD ++ +L+
Sbjct: 548 LEHYTCVVDMLGRA---------------GRIDDALRL---IEEMPGDPDSRIWSSLLSS 589
Query: 241 CAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVS-MYTKCGDLELARRVF----DAVLEK 295
C GNL L + + LL+ E P + +L+S ++ G + RRV D L+K
Sbjct: 590 CRIHGNLGLGEKVANKLLE--LEPEKPENYVLISNLFAGSGKWDDVRRVRGRMKDIGLQK 647
Query: 296 SVFL-WTSMIG-------GYAQLGYPSEAVNLFKRL-LKTS---VRPNEATLATTLSACA 343
W + G G L E ++RL +K S P+ ++ L
Sbjct: 648 DAGCSWIEVGGKVHNFLIGDEMLPELEEVRETWRRLEVKISSIGYTPDTGSVLHDLEEED 707
Query: 344 ELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAV 400
++G L +G + I L + + + + CG + A + +V ++D+ V
Sbjct: 708 KIGIL-RGHSEKLAISFGLLNTAKGLPVRVYKNLRICGDCHNAAKFISKVVNRDIVV 763
>gi|357508385|ref|XP_003624481.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|87240699|gb|ABD32557.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355499496|gb|AES80699.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 672
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 206/535 (38%), Positives = 306/535 (57%), Gaps = 18/535 (3%)
Query: 97 SVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCS----FRQGISMH 152
SV SWNSII+ +R+ + +A+ M L L + STF + CS G +H
Sbjct: 50 SVYSWNSIIADFARSGDSLQALYAFSSMRKLSLHPNRSTFPCTIKSCSSLYDLCAGKQIH 109
Query: 153 CCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNV 212
+ G ++I +A++++ MY+K G +N+AR +FDEI E ++VSWT++I GYV
Sbjct: 110 QQAFVFGY-GSDIFVASALIDMYSKCGYLNDARKLFDEIPERNVVSWTSMISGYVQNERA 168
Query: 213 NEAFGLCNQMRRMSVTP-----------DLVVFLNLILGCAQVGNLFLALSMHSLLLKSG 261
EA L + + T D V+ +I CA+V + +H L +K G
Sbjct: 169 REAVFLFKEFLLVDETDYDEIVGVGVGVDSVLLGCVISACARVCVKSVTECVHGLAVKKG 228
Query: 262 YNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFK 321
+ + N L+ Y KCG++ ++R+VFD + E V W S+I YAQ G EA +LF
Sbjct: 229 FEGCLAVGNTLMDAYAKCGEISVSRKVFDGMEETDVCSWNSLIAVYAQNGLSVEAFSLFS 288
Query: 322 RLLKT-SVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKC 380
++K VR N TL+ L ACA G+L GK I + +V LE N V TS++ M+ KC
Sbjct: 289 DMVKRGEVRYNAVTLSAVLLACAHSGALQIGKCIHDQVVKMELEDNLVVGTSIVDMYCKC 348
Query: 381 GRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSI 440
GR+ A++ F+R+ K++ W+ M+ GY +HG G +A+ +FY+M G+KP+ + + S+
Sbjct: 349 GRVEMARKAFDRLKRKNVKSWTVMVAGYGMHGHGKEAMKVFYEMIRC-GIKPNYITFVSV 407
Query: 441 LSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEV 500
L+ACSH+G++ +G +F M+ F +EP IEHY C+VDLLGRAG A I EM V+
Sbjct: 408 LAACSHAGLLKEGWHWFNKMKCEFDVEPGIEHYSCMVDLLGRAGYLKEAYGLIQEMKVKP 467
Query: 501 QAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARG 560
VW LL AC H NVELGE +A+ L L+P + G Y+L++N++ AG W + R
Sbjct: 468 DFIVWGSLLGACRIHKNVELGEISARKLFKLDPSNCGYYVLLSNIYADAGRWDDVERMRI 527
Query: 561 LMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKELHIKLLEAGYI 615
LM + L K PG+S VE G V VF+ GD+ H I + L EL++KL E GY+
Sbjct: 528 LMKNHGLLKTPGYSIVEHKGRVHVFLVGDKEHPQHEKIYEYLDELNVKLQEVGYM 582
Score = 214 bits (544), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 147/503 (29%), Positives = 247/503 (49%), Gaps = 55/503 (10%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+I + +G + L +SSM + +H N TFP +K+C+++ + GK++H G
Sbjct: 57 IIADFARSGDSLQALYAFSSMRKLSLHPNRSTFPCTIKSCSSLYDLCAGKQIHQQAFVFG 116
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+ D FV + LIDMYSKC +RK+ DE+P R+VVSW S+IS + + EA+ +
Sbjct: 117 YGSDIFVASALIDMYSKCGYLNDARKLFDEIPE--RNVVSWTSMISGYVQNERAREAVFL 174
Query: 121 LKEMWVLG-----------LELSASTFVSVVSGCSFRQGISMHCCVYKLGL---LNNEIP 166
KE ++ + + + V+S C+ S+ CV+ L + +
Sbjct: 175 FKEFLLVDETDYDEIVGVGVGVDSVLLGCVISACARVCVKSVTECVHGLAVKKGFEGCLA 234
Query: 167 LANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQM-RRM 225
+ N++M YAK G+++ +R +FD + ET + SW ++I Y G EAF L + M +R
Sbjct: 235 VGNTLMDAYAKCGEISVSRKVFDGMEETDVCSWNSLIAVYAQNGLSVEAFSLFSDMVKRG 294
Query: 226 SVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELA 285
V + V ++L CA G L + +H ++K + + +V MY KCG +E+A
Sbjct: 295 EVRYNAVTLSAVLLACAHSGALQIGKCIHDQVVKMELEDNLVVGTSIVDMYCKCGRVEMA 354
Query: 286 RRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAEL 345
R+ FD + K+V WT M+ GY G+ EA+ +F +++ ++PN T + L+AC+
Sbjct: 355 RKAFDRLKRKNVKSWTVMVAGYGMHGHGKEAMKVFYEMIRCGIKPNYITFVSVLAACSHA 414
Query: 346 GSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMI 405
G L +G H F NK K F+ P + +S M+
Sbjct: 415 GLLKEG----------------------WHWF------NKMKCEFDVEP--GIEHYSCMV 444
Query: 406 NGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFG 465
+ G +A L +M+ +KPD +V+ S+L AC V+ G S + F
Sbjct: 445 DLLGRAGYLKEAYGLIQEMK----VKPDFIVWGSLLGACRIHKNVELGEI---SARKLFK 497
Query: 466 IEPS-IEHYLCLVDLLGRAGRFD 487
++PS +Y+ L ++ AGR+D
Sbjct: 498 LDPSNCGYYVLLSNIYADAGRWD 520
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 109/392 (27%), Positives = 190/392 (48%), Gaps = 31/392 (7%)
Query: 185 RSIFDE-IGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQ 243
RS+F + + +TS+ SW +II + G+ +A + MR++S+ P+ F I C+
Sbjct: 39 RSMFGKYVDKTSVYSWNSIIADFARSGDSLQALYAFSSMRKLSLHPNRSTFPCTIKSCSS 98
Query: 244 VGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSM 303
+ +L +H GY ++ + + L+ MY+KCG L AR++FD + E++V WTSM
Sbjct: 99 LYDLCAGKQIHQQAFVFGYGSDIFVASALIDMYSKCGYLNDARKLFDEIPERNVVSWTSM 158
Query: 304 IGGYAQLGYPSEAVNLFKRLL-----------KTSVRPNEATLATTLSACAELGSLSKGK 352
I GY Q EAV LFK L V + L +SACA + S +
Sbjct: 159 ISGYVQNERAREAVFLFKEFLLVDETDYDEIVGVGVGVDSVLLGCVISACARVCVKSVTE 218
Query: 353 EIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHG 412
+ V G E V +L+ ++KCG I+ +++VF+ + + D+ W+++I YA +G
Sbjct: 219 CVHGLAVKKGFEGCLAVGNTLMDAYAKCGEISVSRKVFDGMEETDVCSWNSLIAVYAQNG 278
Query: 413 MGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKS-----MQSNFGIE 467
+ +A +LF M ++ +AV +++L AC+HSG + G ++ N +
Sbjct: 279 LSVEAFSLFSDMVKRGEVRYNAVTLSAVLLACAHSGALQIGKCIHDQVVKMELEDNLVVG 338
Query: 468 PSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKN 527
SI VD+ + GR ++A K + + + W +++ H + G+ A K
Sbjct: 339 TSI------VDMYCKCGRVEMARKAFDRLKRK-NVKSWTVMVAGYGMHGH---GKEAMKV 388
Query: 528 LLTL-NPGSTGNYILMANLFTS---AGMWKEA 555
+ G NYI ++ + AG+ KE
Sbjct: 389 FYEMIRCGIKPNYITFVSVLAACSHAGLLKEG 420
>gi|225423549|ref|XP_002274857.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g69350, mitochondrial [Vitis vinifera]
Length = 875
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 200/623 (32%), Positives = 335/623 (53%), Gaps = 9/623 (1%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
++ N NG E L +S M+ V +S T V +AC+ + S+ G+ VH +V++
Sbjct: 172 IVLNFVQNGQASEGLDMFSQMISEAVEPDSVTMLSVTEACSELGSLRLGRSVHGYVVRRE 231
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+ +A + LI MY K D S+ ++ + +P R+ W +IS ++++ EA+ V
Sbjct: 232 IESNASLNNSLIVMYGKLGDLYSAERLFENVPCRM--TAPWTPMISCYNQSGCFQEALNV 289
Query: 121 LKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
+M +E + T V V+ C+ ++G S+H V + + L ++M +YA
Sbjct: 290 FAKMQEFKMEPNQVTMVGVLCACARLGRVKEGRSVHGFVIRRAMDPELDFLGPALMELYA 349
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
G + + +F+ I E +I+SW T+I + G EA L QM+ + PD +
Sbjct: 350 DTGNLRDCHKVFETIKEKTILSWNTLISIFTRNGQPEEALLLFVQMQTQGLMPDSYSLAS 409
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
+ C + L +H ++K+G N D + N L+ MY KCG + A ++F+ + EKS
Sbjct: 410 SLSACGTISFSQLGAQIHGYIIKTG-NFNDFVQNALIDMYAKCGFVHSANKMFEKIKEKS 468
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEE 356
+ W SMI G++Q GY EA+ LF ++ V+ ++ T + + AC+ LG L KGK +
Sbjct: 469 LVTWNSMICGFSQNGYSVEAITLFDQMYMNCVKMDKLTFLSVIQACSHLGYLEKGKWVHH 528
Query: 357 YIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQ 416
+++ GL + + T+L M+SKCG + A VF+R+ ++ + WS MI GY +HG +
Sbjct: 529 KLIMYGLRKDSYLDTALTDMYSKCGELQMAHGVFDRMSERSIVSWSVMIAGYGMHGQINA 588
Query: 417 ALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCL 476
++LF +M G+KP+ + + ILSACSH+G V++G +F SM S FG+EP +H+ C+
Sbjct: 589 TISLFNQMLG-SGIKPNDITFMHILSACSHAGAVEEGKLYFNSM-SEFGVEPKHDHFACM 646
Query: 477 VDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGST 536
VDLL RAG + A + I +P + +W LL+ C H +++ + KNLL ++ T
Sbjct: 647 VDLLSRAGDLNGAYQIITSLPFPANSSIWGALLNGCRIHKRIDIIKSIEKNLLDVDTADT 706
Query: 537 GNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSV 596
G Y L++N++ G W + R +M + L K PG+S +EID + F GD SH +
Sbjct: 707 GYYTLLSNIYAEEGTWDKFGKVRSMMKSKGLRKVPGYSTIEIDKKIYRFGPGDTSHSQTK 766
Query: 597 DIRKTLKELHIKLLEAGYIAEAD 619
DI + L+ + Y +E D
Sbjct: 767 DIYRFLENFRSLVHAQVYDSEPD 789
Score = 230 bits (587), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 142/451 (31%), Positives = 243/451 (53%), Gaps = 11/451 (2%)
Query: 9 GSFEETLSTYSSML-QTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFV 67
G FEE +S Y M+ Q ++F FP VLKAC+ + G +VH V+K GF+ DA V
Sbjct: 78 GFFEEAVSLYHEMVYQDQTQISNFVFPSVLKACSGFGDLSVGGKVHGRVIKCGFESDAVV 137
Query: 68 QTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVL 127
+T L+ MY + S + K D MP+ R VV+W+SI+ + E + + +M
Sbjct: 138 ETSLLCMYGEMSCLDDACKAFDTMPI--RDVVAWSSIVLNFVQNGQASEGLDMFSQMISE 195
Query: 128 GLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNE 183
+E + T +SV C S R G S+H V + + +N L NS++ MY K G +
Sbjct: 196 AVEPDSVTMLSVTEACSELGSLRLGRSVHGYVVRREIESNA-SLNNSLIVMYGKLGDLYS 254
Query: 184 ARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQ 243
A +F+ + WT +I Y G EA + +M+ + P+ V + ++ CA+
Sbjct: 255 AERLFENVPCRMTAPWTPMISCYNQSGCFQEALNVFAKMQEFKMEPNQVTMVGVLCACAR 314
Query: 244 VGNLFLALSMHSLLLKSGYNNE-DPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTS 302
+G + S+H +++ + E D L L+ +Y G+L +VF+ + EK++ W +
Sbjct: 315 LGRVKEGRSVHGFVIRRAMDPELDFLGPALMELYADTGNLRDCHKVFETIKEKTILSWNT 374
Query: 303 MIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNG 362
+I + + G P EA+ LF ++ + P+ +LA++LSAC + G +I YI+ G
Sbjct: 375 LISIFTRNGQPEEALLLFVQMQTQGLMPDSYSLASSLSACGTISFSQLGAQIHGYIIKTG 434
Query: 363 LESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFY 422
N VQ +LI M++KCG ++ A ++FE++ +K L W++MI G++ +G +A+ LF
Sbjct: 435 -NFNDFVQNALIDMYAKCGFVHSANKMFEKIKEKSLVTWNSMICGFSQNGYSVEAITLFD 493
Query: 423 KMQHVEGLKPDAVVYTSILSACSHSGMVDDG 453
+M ++ +K D + + S++ ACSH G ++ G
Sbjct: 494 QM-YMNCVKMDKLTFLSVIQACSHLGYLEKG 523
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 115/415 (27%), Positives = 214/415 (51%), Gaps = 13/415 (3%)
Query: 36 VLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRL 95
+ + CA ++ ++H+H+ G + T LI+ Y++ F SS++V D P
Sbjct: 7 LFRRCATSTTL---TQLHAHLFITGLHRHPPASTKLIESYAQIGIFESSKRVFDTFPKP- 62
Query: 96 RSVVSWNSIISAHSRACLNDEAILVLKEM-WVLGLELSASTFVSVVSGCS----FRQGIS 150
W +I + +EA+ + EM + ++S F SV+ CS G
Sbjct: 63 -DSFMWGVLIKCYVWGGFFEEAVSLYHEMVYQDQTQISNFVFPSVLKACSGFGDLSVGGK 121
Query: 151 MHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVG 210
+H V K G ++ + + S++ MY + +++A FD + +V+W++I+ +V G
Sbjct: 122 VHGRVIKCGFESDAV-VETSLLCMYGEMSCLDDACKAFDTMPIRDVVAWSSIVLNFVQNG 180
Query: 211 NVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDN 270
+E + +QM +V PD V L++ C+++G+L L S+H +++ + L+N
Sbjct: 181 QASEGLDMFSQMISEAVEPDSVTMLSVTEACSELGSLRLGRSVHGYVVRREIESNASLNN 240
Query: 271 LLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRP 330
L+ MY K GDL A R+F+ V + WT MI Y Q G EA+N+F ++ + + P
Sbjct: 241 SLIVMYGKLGDLYSAERLFENVPCRMTAPWTPMISCYNQSGCFQEALNVFAKMQEFKMEP 300
Query: 331 NEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQ-VQTSLIHMFSKCGRINKAKEV 389
N+ T+ L ACA LG + +G+ + +++ ++ + +L+ +++ G + +V
Sbjct: 301 NQVTMVGVLCACARLGRVKEGRSVHGFVIRRAMDPELDFLGPALMELYADTGNLRDCHKV 360
Query: 390 FERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSAC 444
FE + +K + W+ +I+ + +G ++AL LF +MQ +GL PD+ S LSAC
Sbjct: 361 FETIKEKTILSWNTLISIFTRNGQPEEALLLFVQMQ-TQGLMPDSYSLASSLSAC 414
Score = 158 bits (400), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 89/296 (30%), Positives = 157/296 (53%), Gaps = 2/296 (0%)
Query: 161 LNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCN 220
L+ P + ++ YA+ G ++ +FD + W +I YV G EA L +
Sbjct: 29 LHRHPPASTKLIESYAQIGIFESSKRVFDTFPKPDSFMWGVLIKCYVWGGFFEEAVSLYH 88
Query: 221 QMRRMSVTP-DLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKC 279
+M T VF +++ C+ G+L + +H ++K G+ ++ ++ L+ MY +
Sbjct: 89 EMVYQDQTQISNFVFPSVLKACSGFGDLSVGGKVHGRVIKCGFESDAVVETSLLCMYGEM 148
Query: 280 GDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTL 339
L+ A + FD + + V W+S++ + Q G SE +++F +++ +V P+ T+ +
Sbjct: 149 SCLDDACKAFDTMPIRDVVAWSSIVLNFVQNGQASEGLDMFSQMISEAVEPDSVTMLSVT 208
Query: 340 SACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLA 399
AC+ELGSL G+ + Y+V +ESN + SLI M+ K G + A+ +FE VP + A
Sbjct: 209 EACSELGSLRLGRSVHGYVVRREIESNASLNNSLIVMYGKLGDLYSAERLFENVPCRMTA 268
Query: 400 VWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLS 455
W+ MI+ Y G +ALN+F KMQ + ++P+ V +L AC+ G V +G S
Sbjct: 269 PWTPMISCYNQSGCFQEALNVFAKMQEFK-MEPNQVTMVGVLCACARLGRVKEGRS 323
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 74/159 (46%), Gaps = 6/159 (3%)
Query: 342 CAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVW 401
CA +L+ ++ ++ + GL + T LI +++ G +K VF+ P D +W
Sbjct: 11 CATSTTLT---QLHAHLFITGLHRHPPASTKLIESYAQIGIFESSKRVFDTFPKPDSFMW 67
Query: 402 SAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFF-KSM 460
+I Y G ++A++L+++M + + + V+ S+L ACS G + G + +
Sbjct: 68 GVLIKCYVWGGFFEEAVSLYHEMVYQDQTQISNFVFPSVLKACSGFGDLSVGGKVHGRVI 127
Query: 461 QSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVE 499
+ F + +E L+ + G D A K MP+
Sbjct: 128 KCGFESDAVVE--TSLLCMYGEMSCLDDACKAFDTMPIR 164
>gi|125595802|gb|EAZ35582.1| hypothetical protein OsJ_19868 [Oryza sativa Japonica Group]
Length = 734
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 204/624 (32%), Positives = 342/624 (54%), Gaps = 7/624 (1%)
Query: 2 IRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGF 61
+R S L+ + +M G TF +LK CA + G+ VH+ + G
Sbjct: 31 LRASAARSDLPAALAAFVAMSSAGAPPVLRTFTSLLKLCAARGDLATGRAVHAQLAARGI 90
Query: 62 QQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAI-LV 120
+A T L +MY+KC +R+V D MPVR R V+WN++++ ++R L A+ +V
Sbjct: 91 DSEALAATALANMYAKCRRPADARRVFDRMPVRDR--VAWNALVAGYARNGLARMAMEMV 148
Query: 121 LKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGL---LNNEIPLANSVMSMYAK 177
++ G + T VSV+ C+ + ++ + + L + +A +++ Y K
Sbjct: 149 VRMQEEEGERPDSITLVSVLPACANARALAACREAHAFAIRSGLEELVNVATAILDAYCK 208
Query: 178 FGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNL 237
G + AR +FD + + VSW +I GY G+ EA L N+M V V L
Sbjct: 209 CGDIRAARVVFDWMPTKNSVSWNAMIDGYAQNGDSREALALFNRMVEEGVDVTDVSVLAA 268
Query: 238 ILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSV 297
+ C ++G L + +H LL++ G ++ + N L++MY+KC ++LA VFD + ++
Sbjct: 269 LQACGELGCLDEGMRVHELLVRIGLDSNVSVMNALITMYSKCKRVDLASHVFDELDRRTQ 328
Query: 298 FLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEY 357
W +MI G AQ G +AV LF R+ +V+P+ TL + + A A++ + + I Y
Sbjct: 329 VSWNAMILGCAQNGCSEDAVRLFTRMQLENVKPDSFTLVSVIPALADISDPLQARWIHGY 388
Query: 358 IVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQA 417
+ L+ + V T+LI M++KCGR+N A+ +F ++ + W+AMI+GY HG G A
Sbjct: 389 SIRLHLDQDVYVLTALIDMYAKCGRVNIARILFNSARERHVITWNAMIHGYGSHGFGKAA 448
Query: 418 LNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLV 477
+ LF +M+ + G+ P+ + S+LSACSH+G+VD+G +F SM+ ++G+EP +EHY +V
Sbjct: 449 VELFEEMKSI-GIVPNETTFLSVLSACSHAGLVDEGREYFTSMKEDYGLEPGMEHYGTMV 507
Query: 478 DLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTG 537
DLLGRAG+ D A I +MP++ V+ +L AC H NVEL E +A+ + L P
Sbjct: 508 DLLGRAGKLDEAWAFIQKMPMDPGLSVYGAMLGACKLHKNVELAEESAQKIFELGPQEGV 567
Query: 538 NYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVD 597
++L+AN++ +A MWK+ A R M+ L K PGWS +++ + F +G +H + +
Sbjct: 568 YHVLLANIYANASMWKDVARVRTAMEKNGLQKTPGWSIIQLKNEIHTFYSGSTNHQQAKE 627
Query: 598 IRKTLKELHIKLLEAGYIAEADIV 621
I L +L ++ GY+ + D +
Sbjct: 628 IYSRLAKLIEEIKAVGYVPDTDSI 651
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 68/249 (27%), Positives = 127/249 (51%), Gaps = 7/249 (2%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI NG E L+ ++ M++ GV + L+AC + + +G RVH ++++G
Sbjct: 233 MIDGYAQNGDSREALALFNRMVEEGVDVTDVSVLAALQACGELGCLDEGMRVHELLVRIG 292
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+ V LI MYSKC + V DE+ R + VSWN++I ++ +++A+ +
Sbjct: 293 LDSNVSVMNALITMYSKCKRVDLASHVFDELDRRTQ--VSWNAMILGCAQNGCSEDAVRL 350
Query: 121 LKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
M + ++ + T VSV+ + Q +H +L L+ ++ + +++ MYA
Sbjct: 351 FTRMQLENVKPDSFTLVSVIPALADISDPLQARWIHGYSIRLH-LDQDVYVLTALIDMYA 409
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K G+VN AR +F+ E +++W +I GY + G A L +M+ + + P+ FL+
Sbjct: 410 KCGRVNIARILFNSARERHVITWNAMIHGYGSHGFGKAAVELFEEMKSIGIVPNETTFLS 469
Query: 237 LILGCAQVG 245
++ C+ G
Sbjct: 470 VLSACSHAG 478
>gi|413932901|gb|AFW67452.1| hypothetical protein ZEAMMB73_642603 [Zea mays]
Length = 853
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 198/624 (31%), Positives = 347/624 (55%), Gaps = 8/624 (1%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
M+ G + + + +M +G N T L CA + G ++HS +K G
Sbjct: 213 MMDGCIKAGDVDGAVRLFRNMRASGCEPNFATLACFLSVCATDADLLSGAQLHSLAVKCG 272
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+ + V L+ MY+KC + ++ + MP +V+WN +IS + L EA +
Sbjct: 273 LEPEVAVANTLLAMYAKCQCLDDAWRLFELMPQD--DLVTWNGMISGCVQNGLFVEAFGL 330
Query: 121 LKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
+M G + T VS++ + +QG +H + + +N ++ L ++++ +Y
Sbjct: 331 FYDMQRSGARPDSITLVSLLPALTDLNGLKQGKEVHGYIVR-NCVNMDVFLVSALVDIYF 389
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K V A++++D +V +T+I GYV G EA + + + P+ V +
Sbjct: 390 KCRDVRMAQNLYDAARAIDVVIGSTMISGYVLNGMSEEALQMFRYLLEQCIKPNAVTIAS 449
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
++ GCA + L L +H +L++ Y + +++ L+ MY KCG L+L+ +F + +K
Sbjct: 450 VLPGCASMAALPLGQQIHGYVLRNAYERKCYVESALMDMYAKCGRLDLSHYIFLKMSQKD 509
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEE 356
W SMI ++Q G P EA++LF+++ ++ N T++ LSACA L ++ GKEI
Sbjct: 510 EVTWNSMISSFSQNGKPQEALDLFRQMCMEGIKYNNITISAALSACASLPAIYYGKEIHG 569
Query: 357 YIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQ 416
+ ++++ +++LI M++KCG + A VFE +PDK+ W+++I+ Y HG+ +
Sbjct: 570 VTIKGPIKADIFAESALIDMYAKCGNLELALRVFEFMPDKNEVSWNSIISAYGAHGLVKE 629
Query: 417 ALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCL 476
+++L + MQ EG KPD V + +++SAC+H+G+V++G+ F+ M + I P +EH+ C+
Sbjct: 630 SVSLLHGMQE-EGYKPDHVTFLALISACAHAGLVEEGVQLFQCMTKKYLIAPRMEHFACM 688
Query: 477 VDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGST 536
VDL R+G+ D A++ I +MP + A +W LL AC H NVEL + A++ L L+P ++
Sbjct: 689 VDLYSRSGKLDKAIQFIADMPFKPDAGIWGALLHACRVHRNVELADIASQELFKLDPANS 748
Query: 537 GNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSV 596
G Y+LM+N+ AG W + R LM D ++ K PG+S V+++ S +FVA D+SH S
Sbjct: 749 GYYVLMSNINAVAGRWDGVSKVRRLMKDNKILKIPGYSWVDVNNSSHLFVASDKSHPESE 808
Query: 597 DIRKTLKELHIKLLEAGYIAEADI 620
DI +LK L +L E GY+ D+
Sbjct: 809 DIYTSLKTLLQELREEGYVPRPDL 832
Score = 234 bits (598), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 145/526 (27%), Positives = 271/526 (51%), Gaps = 22/526 (4%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQ--TGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLK 58
+IR T G + Y M ++ T P V+K+CA + ++ G+ VH
Sbjct: 110 LIRGFTAAGQHHLAVLFYVKMWSHPAAPSPDAHTLPYVVKSCAALGAMSLGRLVHRTARA 169
Query: 59 VGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAI 118
+G D +V + L+ MY+ ++R D +P R V WN ++ +A D A+
Sbjct: 170 IGLANDVYVGSALVKMYADAGLLGNARDAFDGIPE--RDCVLWNVMMDGCIKAGDVDGAV 227
Query: 119 LVLKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSM 174
+ + M G E + +T +S C+ G +H K G L E+ +AN++++M
Sbjct: 228 RLFRNMRASGCEPNFATLACFLSVCATDADLLSGAQLHSLAVKCG-LEPEVAVANTLLAM 286
Query: 175 YAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVF 234
YAK +++A +F+ + + +V+W +I G V G EAFGL M+R PD +
Sbjct: 287 YAKCQCLDDAWRLFELMPQDDLVTWNGMISGCVQNGLFVEAFGLFYDMQRSGARPDSITL 346
Query: 235 LNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLE 294
++L+ + L +H ++++ N + L + LV +Y KC D+ +A+ ++DA
Sbjct: 347 VSLLPALTDLNGLKQGKEVHGYIVRNCVNMDVFLVSALVDIYFKCRDVRMAQNLYDAARA 406
Query: 295 KSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEI 354
V + ++MI GY G EA+ +F+ LL+ ++PN T+A+ L CA + +L G++I
Sbjct: 407 IDVVIGSTMISGYVLNGMSEEALQMFRYLLEQCIKPNAVTIASVLPGCASMAALPLGQQI 466
Query: 355 EEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMG 414
Y++ N E V+++L+ M++KCGR++ + +F ++ KD W++MI+ ++ +G
Sbjct: 467 HGYVLRNAYERKCYVESALMDMYAKCGRLDLSHYIFLKMSQKDEVTWNSMISSFSQNGKP 526
Query: 415 DQALNLFYKMQHVEGLKPDAVVYTSILSACS-----HSGMVDDGLSFFKSMQSNFGIEPS 469
+AL+LF +M +EG+K + + ++ LSAC+ + G G++ ++++ E +
Sbjct: 527 QEALDLFRQMC-MEGIKYNNITISAALSACASLPAIYYGKEIHGVTIKGPIKADIFAESA 585
Query: 470 IEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKH 515
L+D+ + G +LAL+ MP + + W ++SA H
Sbjct: 586 ------LIDMYAKCGNLELALRVFEFMPDKNEVS-WNSIISAYGAH 624
Score = 184 bits (468), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 128/463 (27%), Positives = 218/463 (47%), Gaps = 11/463 (2%)
Query: 36 VLKACANINSIWDGKRVHSHVLKVGFQQDA---FVQTGLIDMYSKCSDFVSSRKVLDEMP 92
VL+ C + + G ++H+ + G D + T L+ MY F + V +P
Sbjct: 38 VLRGCVSAPHLPLGLQIHARAVVSGALSDHNHLALHTRLLGMYVLARRFRDAVAVFSALP 97
Query: 93 -VRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELS--ASTFVSVVSGCSFRQGI 149
S + WN +I + A + A+L +MW S A T VV C+ +
Sbjct: 98 RAAAASSLPWNWLIRGFTAAGQHHLAVLFYVKMWSHPAAPSPDAHTLPYVVKSCAALGAM 157
Query: 150 SMHCCVYKLGL---LNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGY 206
S+ V++ L N++ + ++++ MYA G + AR FD I E V W ++ G
Sbjct: 158 SLGRLVHRTARAIGLANDVYVGSALVKMYADAGLLGNARDAFDGIPERDCVLWNVMMDGC 217
Query: 207 VNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNED 266
+ G+V+ A L MR P+ + CA +L +HSL +K G E
Sbjct: 218 IKAGDVDGAVRLFRNMRASGCEPNFATLACFLSVCATDADLLSGAQLHSLAVKCGLEPEV 277
Query: 267 PLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKT 326
+ N L++MY KC L+ A R+F+ + + + W MI G Q G EA LF + ++
Sbjct: 278 AVANTLLAMYAKCQCLDDAWRLFELMPQDDLVTWNGMISGCVQNGLFVEAFGLFYDMQRS 337
Query: 327 SVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKA 386
RP+ TL + L A +L L +GKE+ YIV N + + + ++L+ ++ KC + A
Sbjct: 338 GARPDSITLVSLLPALTDLNGLKQGKEVHGYIVRNCVNMDVFLVSALVDIYFKCRDVRMA 397
Query: 387 KEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSH 446
+ +++ D+ + S MI+GY ++GM ++AL +F + + +KP+AV S+L C+
Sbjct: 398 QNLYDAARAIDVVIGSTMISGYVLNGMSEEALQMFRYLLE-QCIKPNAVTIASVLPGCAS 456
Query: 447 SGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLA 489
+ G + N E L+D+ + GR DL+
Sbjct: 457 MAALPLGQQIHGYVLRN-AYERKCYVESALMDMYAKCGRLDLS 498
>gi|357118962|ref|XP_003561216.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Brachypodium distachyon]
Length = 900
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 205/625 (32%), Positives = 341/625 (54%), Gaps = 8/625 (1%)
Query: 2 IRNSTNNGSFEETLSTYSSMLQTGVHGNSF-TFPLVLKACANINSIWDGKRVHSHVLKVG 60
+R + + L+ +++M G TF +LK CA + G+ VH+ + G
Sbjct: 196 LRAAASRSDLRGALAAFAAMSPASGSGPVLRTFTSLLKLCAARADLATGRAVHAQLAARG 255
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAI-L 119
+A T L +MY+KC +R+V D MP R R V+WN++++ ++R L + A+ +
Sbjct: 256 LSPEALAATALANMYAKCRRPGDARRVFDRMPARDR--VAWNALVAGYARNGLAEAAVGM 313
Query: 120 VLKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKL---GLLNNEIPLANSVMSMYA 176
V++ G A T VSV+ C+ Q + V+ G + ++ ++ +++ +Y
Sbjct: 314 VVRMQEEDGERPDAVTLVSVLPACADAQALGACREVHAFAVRGGFDEQVNVSTAILDVYC 373
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K G V+ AR +FD + + + VSW +I GY G+ EA L +M V V L
Sbjct: 374 KCGAVDSARKVFDGMQDRNSVSWNAMIKGYAENGDATEALALFKRMVGEGVDVTDVSVLA 433
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
+ C ++G L +H LL++ G + + N L++MY KC +LA +VFD + K+
Sbjct: 434 ALHACGELGFLDEGRRVHELLVRIGLESNVNVMNALITMYCKCKRTDLAAQVFDELGYKT 493
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEE 356
W +MI G Q G +AV LF R+ +V+P+ TL + + A A++ + + I
Sbjct: 494 RVSWNAMILGCTQNGSSEDAVRLFSRMQLENVKPDSFTLVSIIPALADISDPLQARWIHG 553
Query: 357 YIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQ 416
Y + L+ + V T+LI M++KCGR++ A+ +F D+ + W+AMI+GY HG G
Sbjct: 554 YSIRLHLDQDVYVLTALIDMYAKCGRVSIARSLFNSARDRHVITWNAMIHGYGSHGSGKV 613
Query: 417 ALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCL 476
A+ LF +M+ G P+ + S+LSACSH+G+VD+G +F SM+ ++G+EP +EHY +
Sbjct: 614 AVELFEEMKS-SGKVPNETTFLSVLSACSHAGLVDEGQEYFSSMKEDYGLEPGMEHYGTM 672
Query: 477 VDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGST 536
VDLLGRAG+ A I +MP+E V+ +L AC H NVEL E +A+ + L P
Sbjct: 673 VDLLGRAGKLHEAWSFIQKMPMEPGISVYGAMLGACKLHKNVELAEESAQRIFELEPEEG 732
Query: 537 GNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSV 596
++L+AN++ +A +WK+ A R M+ + L K PGWS V++ + F +G +H +
Sbjct: 733 VYHVLLANIYANASLWKDVARVRTAMEKKGLQKTPGWSIVQLKNEIHTFYSGSTNHQQAK 792
Query: 597 DIRKTLKELHIKLLEAGYIAEADIV 621
DI L +L ++ GY+ + D +
Sbjct: 793 DIYARLAKLIEEIKAVGYVPDTDSI 817
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 127/249 (51%), Gaps = 7/249 (2%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI+ NG E L+ + M+ GV + L AC + + +G+RVH ++++G
Sbjct: 399 MIKGYAENGDATEALALFKRMVGEGVDVTDVSVLAALHACGELGFLDEGRRVHELLVRIG 458
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+ + V LI MY KC + +V DE+ + R VSWN++I ++ +++A+ +
Sbjct: 459 LESNVNVMNALITMYCKCKRTDLAAQVFDELGYKTR--VSWNAMILGCTQNGSSEDAVRL 516
Query: 121 LKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
M + ++ + T VS++ + Q +H +L L+ ++ + +++ MYA
Sbjct: 517 FSRMQLENVKPDSFTLVSIIPALADISDPLQARWIHGYSIRLH-LDQDVYVLTALIDMYA 575
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K G+V+ ARS+F+ + +++W +I GY + G+ A L +M+ P+ FL+
Sbjct: 576 KCGRVSIARSLFNSARDRHVITWNAMIHGYGSHGSGKVAVELFEEMKSSGKVPNETTFLS 635
Query: 237 LILGCAQVG 245
++ C+ G
Sbjct: 636 VLSACSHAG 644
>gi|414587344|tpg|DAA37915.1| TPA: hypothetical protein ZEAMMB73_465451 [Zea mays]
gi|414587345|tpg|DAA37916.1| TPA: hypothetical protein ZEAMMB73_465451 [Zea mays]
Length = 920
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 201/620 (32%), Positives = 341/620 (55%), Gaps = 6/620 (0%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+I G E L + M +G+ + T +L ACA++ + GK++HS++LK G
Sbjct: 216 LISGHAQCGHGECALQIFDEMQLSGLRPDCVTVASLLAACASVGDLQKGKQLHSYLLKAG 275
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
D + L+D+Y KC D ++ + + + R +VV WN ++ A+ + ++ +
Sbjct: 276 MSFDYITEGSLLDLYVKCGDIETAHDIFN-LGDRT-NVVLWNLMLVAYGQISDLAKSFEI 333
Query: 121 LKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGLLN---NEIPLANSVMSMYAK 177
+M G+ + T+ ++ C+ I + ++ L + N +++ ++ ++ MY+K
Sbjct: 334 FGQMQATGIHPNQFTYPCILRTCTCTGQIELGEQIHSLSIKNGFESDMYVSGVLIDMYSK 393
Query: 178 FGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNL 237
+G +++AR I + + + +VSWT++I GYV EA +M+ V PD + +
Sbjct: 394 YGCLDKARKILEMLEKRDVVSWTSMIAGYVQHDFCEEALATFKEMQDCGVWPDNIGLASA 453
Query: 238 ILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSV 297
CA + + L +H+ + SGY + + N LV++Y +CG E A +F + K
Sbjct: 454 ASACAGIKAMRQGLQIHARVYVSGYAADISIWNTLVNLYARCGRSEEAFSLFREIEHKDE 513
Query: 298 FLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEY 357
W +I G+ Q +A+ +F ++ + + N T + +SA A L + +GK++
Sbjct: 514 ITWNGLISGFGQSRLYKQALMVFMKMGQAGAKYNVFTFISAISALANLADIKQGKQVHGR 573
Query: 358 IVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQA 417
V G S +V +LI ++ KCG I AK +F + ++ W+ +I + HG G +A
Sbjct: 574 AVKTGHTSETEVANALISLYGKCGSIEDAKMIFSEMSLRNEVSWNTIITSCSQHGRGLEA 633
Query: 418 LNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLV 477
L+LF +M+ EGLKP+ V + +L+ACSH G+V++GLS+FKSM + +G+ P +HY C+V
Sbjct: 634 LDLFDQMKQ-EGLKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSNVYGLNPIPDHYACVV 692
Query: 478 DLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTG 537
D+LGRAG+ D A + + EMP+ A +W LLSAC H N+E+GE AAK+LL L P +
Sbjct: 693 DILGRAGQLDRARRFVDEMPITANAMIWRTLLSACKVHKNIEIGELAAKHLLELEPHDSA 752
Query: 538 NYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVD 597
+Y+L++N + G W R +M DR + KEPG S +E+ +V F GDR H LS
Sbjct: 753 SYVLLSNAYAVTGKWANRDQVRKMMKDRGIRKEPGRSWIEVKNAVHAFFVGDRLHPLSDQ 812
Query: 598 IRKTLKELHIKLLEAGYIAE 617
I K L EL+ +L + GY E
Sbjct: 813 IYKFLSELNDRLSKIGYKQE 832
Score = 214 bits (544), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 133/520 (25%), Positives = 259/520 (49%), Gaps = 12/520 (2%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
M+ +G +E YS M T V + VL AC G+ +H+ V K
Sbjct: 115 MLSGYAQSGLGKEAFRLYSQMHWTAVIPTPYVLSSVLSACTKGKLFAQGRMIHAQVYKQA 174
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F + FV LI +Y F + +V +M R V++N++IS H++ + A+ +
Sbjct: 175 FCSETFVGNALIALYLGFGSFKLAERVFCDMLFCDR--VTFNTLISGHAQCGHGECALQI 232
Query: 121 LKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
EM + GL T S+++ C+ ++G +H + K G+ + I S++ +Y
Sbjct: 233 FDEMQLSGLRPDCVTVASLLAACASVGDLQKGKQLHSYLLKAGMSFDYIT-EGSLLDLYV 291
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K G + A IF+ T++V W ++ Y + ++ ++F + QM+ + P+ +
Sbjct: 292 KCGDIETAHDIFNLGDRTNVVLWNLMLVAYGQISDLAKSFEIFGQMQATGIHPNQFTYPC 351
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
++ C G + L +HSL +K+G+ ++ + +L+ MY+K G L+ AR++ + + ++
Sbjct: 352 ILRTCTCTGQIELGEQIHSLSIKNGFESDMYVSGVLIDMYSKYGCLDKARKILEMLEKRD 411
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEE 356
V WTSMI GY Q + EA+ FK + V P+ LA+ SACA + ++ +G +I
Sbjct: 412 VVSWTSMIAGYVQHDFCEEALATFKEMQDCGVWPDNIGLASAASACAGIKAMRQGLQIHA 471
Query: 357 YIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQ 416
+ ++G ++ + +L++++++CGR +A +F + KD W+ +I+G+ + Q
Sbjct: 472 RVYVSGYAADISIWNTLVNLYARCGRSEEAFSLFREIEHKDEITWNGLISGFGQSRLYKQ 531
Query: 417 ALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFF-KSMQSNFGIEPSIEHYLC 475
AL +F KM G K + + S +SA ++ + G +++++ E + +
Sbjct: 532 ALMVFMKMGQA-GAKYNVFTFISAISALANLADIKQGKQVHGRAVKTGHTSETEVAN--A 588
Query: 476 LVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKH 515
L+ L G+ G + A EM + + W ++++C +H
Sbjct: 589 LISLYGKCGSIEDAKMIFSEMSLRNEVS-WNTIITSCSQH 627
Score = 206 bits (523), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 134/465 (28%), Positives = 232/465 (49%), Gaps = 10/465 (2%)
Query: 37 LKACANINSIWD-GKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRL 95
L+AC + W +H+ + G D + LID+Y+K +R+V E+ R
Sbjct: 49 LQACRGRGNRWPLVLEIHATSVVRGLGADRLIGNLLIDLYAKNGLVWQARQVFKELSSR- 107
Query: 96 RSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCS----FRQGISM 151
VSW +++S ++++ L EA + +M + + SV+S C+ F QG +
Sbjct: 108 -DHVSWVAMLSGYAQSGLGKEAFRLYSQMHWTAVIPTPYVLSSVLSACTKGKLFAQGRMI 166
Query: 152 HCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGN 211
H VYK + E + N+++++Y FG A +F ++ V++ T+I G+ G+
Sbjct: 167 HAQVYKQAFCS-ETFVGNALIALYLGFGSFKLAERVFCDMLFCDRVTFNTLISGHAQCGH 225
Query: 212 VNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNL 271
A + ++M+ + PD V +L+ CA VG+L +HS LLK+G + + +
Sbjct: 226 GECALQIFDEMQLSGLRPDCVTVASLLAACASVGDLQKGKQLHSYLLKAGMSFDYITEGS 285
Query: 272 LVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPN 331
L+ +Y KCGD+E A +F+ +V LW M+ Y Q+ +++ +F ++ T + PN
Sbjct: 286 LLDLYVKCGDIETAHDIFNLGDRTNVVLWNLMLVAYGQISDLAKSFEIFGQMQATGIHPN 345
Query: 332 EATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFE 391
+ T L C G + G++I + NG ES+ V LI M+SK G ++KA+++ E
Sbjct: 346 QFTYPCILRTCTCTGQIELGEQIHSLSIKNGFESDMYVSGVLIDMYSKYGCLDKARKILE 405
Query: 392 RVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVD 451
+ +D+ W++MI GY H ++AL F +MQ G+ PD + S SAC+ +
Sbjct: 406 MLEKRDVVSWTSMIAGYVQHDFCEEALATFKEMQDC-GVWPDNIGLASAASACAGIKAMR 464
Query: 452 DGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEM 496
GL + + G I + LV+L R GR + A E+
Sbjct: 465 QGLQIHARVYVS-GYAADISIWNTLVNLYARCGRSEEAFSLFREI 508
>gi|15235115|ref|NP_195663.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75210987|sp|Q9SVA5.1|PP357_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g39530
gi|5042169|emb|CAB44688.1| putative protein [Arabidopsis thaliana]
gi|7270937|emb|CAB80616.1| putative protein [Arabidopsis thaliana]
gi|332661682|gb|AEE87082.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 834
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 204/616 (33%), Positives = 343/616 (55%), Gaps = 12/616 (1%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI G +L + +++ V + + VL AC+ + + GK++H+H+L+ G
Sbjct: 220 MISGCVKMGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYG 279
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+ DA + LID Y KC +++ K+ + MP + +++SW +++S + + L+ EA+ +
Sbjct: 280 LEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNK--NIISWTTLLSGYKQNALHKEAMEL 337
Query: 121 LKEMWVLGLELSASTFVSVVSGCSFRQ----GISMHCCVYKLGLLNNEIPLANSVMSMYA 176
M GL+ S+++ C+ G +H K L N+ + NS++ MYA
Sbjct: 338 FTSMSKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANL-GNDSYVTNSLIDMYA 396
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGN---VNEAFGLCNQMRRMSVTPDLVV 233
K + +AR +FD +V + +I GY +G ++EA + MR + P L+
Sbjct: 397 KCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLT 456
Query: 234 FLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVL 293
F++L+ A + +L L+ +H L+ K G N + + L+ +Y+ C L+ +R VFD +
Sbjct: 457 FVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMK 516
Query: 294 EKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKE 353
K + +W SM GY Q EA+NLF L + RP+E T A ++A L S+ G+E
Sbjct: 517 VKDLVIWNSMFAGYVQQSENEEALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQE 576
Query: 354 IEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGM 413
++ GLE N + +L+ M++KCG A + F+ +D+ W+++I+ YA HG
Sbjct: 577 FHCQLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGE 636
Query: 414 GDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHY 473
G +AL + KM EG++P+ + + +LSACSH+G+V+DGL F+ M FGIEP EHY
Sbjct: 637 GKKALQMLEKMMS-EGIEPNYITFVGVLSACSHAGLVEDGLKQFELML-RFGIEPETEHY 694
Query: 474 LCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNP 533
+C+V LLGRAGR + A + I +MP + A VW LLS C K NVEL E+AA+ + +P
Sbjct: 695 VCMVSLLGRAGRLNKARELIEKMPTKPAAIVWRSLLSGCAKAGNVELAEHAAEMAILSDP 754
Query: 534 GSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHH 593
+G++ +++N++ S GMW EA R M + KEPG S + I+ V +F++ D+SH
Sbjct: 755 KDSGSFTMLSNIYASKGMWTEAKKVRERMKVEGVVKEPGRSWIGINKEVHIFLSKDKSHC 814
Query: 594 LSVDIRKTLKELHIKL 609
+ I + L +L +++
Sbjct: 815 KANQIYEVLDDLLVQI 830
Score = 192 bits (489), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 149/576 (25%), Positives = 273/576 (47%), Gaps = 29/576 (5%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHG-NSFTFPLVLKACANINSI--WDGKRVHSHVL 57
M+ ++G +EE+L + +T N + ++AC+ ++ W ++ S ++
Sbjct: 116 MVSACNHHGIYEESLVVFLEFWRTRKDSPNEYILSSFIQACSGLDGRGRWMVFQLQSFLV 175
Query: 58 KVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEA 117
K GF +D +V T LID Y K + +R V D +P +S V+W ++IS + + +
Sbjct: 176 KSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPE--KSTVTWTTMISGCVKMGRSYVS 233
Query: 118 ILVLKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMS 173
+ + ++ + +V+S CS G +H + + G L + L N ++
Sbjct: 234 LQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYG-LEMDASLMNVLID 292
Query: 174 MYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVV 233
Y K G+V A +F+ + +I+SWTT++ GY EA L M + + PD+
Sbjct: 293 SYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYA 352
Query: 234 FLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVL 293
+++ CA + L +H+ +K+ N+ + N L+ MY KC L AR+VFD
Sbjct: 353 CSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFA 412
Query: 294 EKSVFLWTSMIGGYAQLGYP---SEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSK 350
V L+ +MI GY++LG EA+N+F+ + +RP+ T + L A A L SL
Sbjct: 413 AADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGL 472
Query: 351 GKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAI 410
K+I + GL + ++LI ++S C + ++ VF+ + KDL +W++M GY
Sbjct: 473 SKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQ 532
Query: 411 HGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFF-KSMQSNFGIEPS 469
++ALNLF ++Q + +PD + ++++A + V G F + ++ P
Sbjct: 533 QSENEEALNLFLELQ-LSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLECNPY 591
Query: 470 IEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNL- 528
I + L+D+ + G + A K + W ++S+ H G+ A + L
Sbjct: 592 ITN--ALLDMYAKCGSPEDAHKAF-DSAASRDVVCWNSVISSYANHGE---GKKALQMLE 645
Query: 529 LTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDD 564
++ G NYI + + A + GL++D
Sbjct: 646 KMMSEGIEPNYITFVGVLS-------ACSHAGLVED 674
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 114/402 (28%), Positives = 213/402 (52%), Gaps = 14/402 (3%)
Query: 52 VHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRA 111
VH ++ G + D ++ LI++YS+ V +RKV ++MP R ++VSW++++SA +
Sbjct: 66 VHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMPER--NLVSWSTMVSACNHH 123
Query: 112 CLNDEAILVLKEMWVLGL----ELSASTFVSVVSGCSFR---QGISMHCCVYKLGLLNNE 164
+ +E+++V E W E S+F+ SG R + + K G + +
Sbjct: 124 GIYEESLVVFLEFWRTRKDSPNEYILSSFIQACSGLDGRGRWMVFQLQSFLVKSGF-DRD 182
Query: 165 IPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRR 224
+ + ++ Y K G ++ AR +FD + E S V+WTT+I G V +G + L Q+
Sbjct: 183 VYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLME 242
Query: 225 MSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLEL 284
+V PD + ++ C+ + L +H+ +L+ G + L N+L+ Y KCG +
Sbjct: 243 DNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIA 302
Query: 285 ARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAE 344
A ++F+ + K++ WT+++ GY Q EA+ LF + K ++P+ ++ L++CA
Sbjct: 303 AHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCAS 362
Query: 345 LGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAM 404
L +L G ++ Y + L ++ V SLI M++KC + A++VF+ D+ +++AM
Sbjct: 363 LHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAM 422
Query: 405 INGYAIHGMG---DQALNLFYKMQHVEGLKPDAVVYTSILSA 443
I GY+ G +ALN+F M+ ++P + + S+L A
Sbjct: 423 IEGYSRLGTQWELHEALNIFRDMR-FRLIRPSLLTFVSLLRA 463
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 80/160 (50%), Gaps = 6/160 (3%)
Query: 358 IVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQA 417
I++ GLE + + LI+++S+ G + A++VFE++P+++L WS M++ HG+ +++
Sbjct: 70 IIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGIYEES 129
Query: 418 LNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNF---GIEPSIEHYL 474
L +F + P+ + +S + AC SG+ G +QS G + +
Sbjct: 130 LVVFLEFWRTRKDSPNEYILSSFIQAC--SGLDGRGRWMVFQLQSFLVKSGFDRDVYVGT 187
Query: 475 CLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMK 514
L+D + G D A +P E W ++S C+K
Sbjct: 188 LLIDFYLKDGNIDYARLVFDALP-EKSTVTWTTMISGCVK 226
>gi|224075493|ref|XP_002304652.1| predicted protein [Populus trichocarpa]
gi|222842084|gb|EEE79631.1| predicted protein [Populus trichocarpa]
Length = 820
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 210/621 (33%), Positives = 335/621 (53%), Gaps = 8/621 (1%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+I+ + F E + +S + G N F F VLK + G VH+ V K+G
Sbjct: 116 LIQGYSQCLRFSEAIGLFSRLQGEGHELNPFVFSTVLKLLVSAEWAKLGFSVHACVYKLG 175
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F DAFV T LID YS C +R+V D + + +VSW +++ + +E++ +
Sbjct: 176 FDSDAFVGTALIDCYSVCGYAECARQVFD--AIEYKDMVSWTGMVACYVENECFEESLKL 233
Query: 121 LKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
M ++G + + TF SV+ C F G ++H C +K L E+ + ++ +Y
Sbjct: 234 FSRMRIVGFKPNNFTFASVLKACVGLEVFNVGKAVHGCAFKTSYLE-ELFVGVELIDLYI 292
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K G V++A +F+E+ + ++ W+ +I Y EA + +MRR V P+ +
Sbjct: 293 KSGDVDDALQVFEEMPKDDVIPWSFMIARYAQSEQSEEAIEMFCRMRRGLVLPNQFTLAS 352
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
L+ CA + +L L +H ++K G + + N L+ MY KCG +E + ++F +
Sbjct: 353 LLQACASLVDLQLGNQIHCHVVKVGLDMNVFVSNALMDMYAKCGRMENSLQLFSESPNCT 412
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEE 356
W ++I GY Q G +A+ LFK +L+ V+ E T ++ L ACA + +L G +I
Sbjct: 413 DVSWNTVIVGYVQAGNGEKALILFKDMLECQVQGTEVTYSSVLRACAGIAALEPGSQIHS 472
Query: 357 YIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQ 416
V + N V +LI M++KCG I A+ VF+ + + D W+AMI+GY++HG+ +
Sbjct: 473 LSVKTIYDKNTVVGNALIDMYAKCGNIKDARLVFDMLREHDQVSWNAMISGYSVHGLYGE 532
Query: 417 ALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCL 476
AL F M E KPD V + ILSACS++G++D G ++FKSM + IEP EHY C+
Sbjct: 533 ALKTFESMLETE-CKPDKVTFVGILSACSNAGLLDRGQAYFKSMVEEYDIEPCAEHYTCM 591
Query: 477 VDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGST 536
V LLGR+G D A K +HE+P E VW LLSAC+ H++VELG +A+ +L + P
Sbjct: 592 VWLLGRSGHLDKAAKLVHEIPFEPSVMVWRALLSACVIHNDVELGRISAQRVLEIEPEDE 651
Query: 537 GNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSV 596
++L++N++ +A W A+ R M + + KEPG S +E G V F GD SH +
Sbjct: 652 ATHVLLSNIYANARRWGNVASIRTSMKRKGIRKEPGLSWIENQGRVHYFSVGDTSHPDTK 711
Query: 597 DIRKTLKELHIKLLEAGYIAE 617
I L+ L++K GY+ +
Sbjct: 712 LINGMLEWLNMKARNEGYVPD 732
Score = 204 bits (518), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 130/429 (30%), Positives = 221/429 (51%), Gaps = 8/429 (1%)
Query: 29 NSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVL 88
N++ + +L++C GK +H ++K G D F L++ Y K + K+
Sbjct: 43 NTYIYGSLLQSCIRNGDCATGKYLHCEIIKKGNCLDLFANNILLNFYVKYDSLPDAAKLF 102
Query: 89 DEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSV----VSGCS 144
DEMP R+ VS+ ++I +S+ EAI + + G EL+ F +V VS
Sbjct: 103 DEMPD--RNTVSFVTLIQGYSQCLRFSEAIGLFSRLQGEGHELNPFVFSTVLKLLVSAEW 160
Query: 145 FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIG 204
+ G S+H CVYKLG +++ + +++ Y+ G AR +FD I +VSWT ++
Sbjct: 161 AKLGFSVHACVYKLG-FDSDAFVGTALIDCYSVCGYAECARQVFDAIEYKDMVSWTGMVA 219
Query: 205 GYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNN 264
YV E+ L ++MR + P+ F +++ C + + ++H K+ Y
Sbjct: 220 CYVENECFEESLKLFSRMRIVGFKPNNFTFASVLKACVGLEVFNVGKAVHGCAFKTSYLE 279
Query: 265 EDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLL 324
E + L+ +Y K GD++ A +VF+ + + V W+ MI YAQ EA+ +F R+
Sbjct: 280 ELFVGVELIDLYIKSGDVDDALQVFEEMPKDDVIPWSFMIARYAQSEQSEEAIEMFCRMR 339
Query: 325 KTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRIN 384
+ V PN+ TLA+ L ACA L L G +I ++V GL+ N V +L+ M++KCGR+
Sbjct: 340 RGLVLPNQFTLASLLQACASLVDLQLGNQIHCHVVKVGLDMNVFVSNALMDMYAKCGRME 399
Query: 385 KAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSAC 444
+ ++F P+ W+ +I GY G G++AL LF M + ++ V Y+S+L AC
Sbjct: 400 NSLQLFSESPNCTDVSWNTVIVGYVQAGNGEKALILFKDMLECQ-VQGTEVTYSSVLRAC 458
Query: 445 SHSGMVDDG 453
+ ++ G
Sbjct: 459 AGIAALEPG 467
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 107/404 (26%), Positives = 190/404 (47%), Gaps = 20/404 (4%)
Query: 108 HSRACLNDEAILVLKEMWVLGLELSAST-------FVSVVSGC----SFRQGISMHCCVY 156
H C ++ A+ ++ + L S S+ + S++ C G +HC +
Sbjct: 12 HPNHCKSNTALCIITQRSFLAQRTSHSSPEFNTYIYGSLLQSCIRNGDCATGKYLHCEII 71
Query: 157 KLGLLNNEIPLANSVM-SMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEA 215
K G N AN+++ + Y K+ + +A +FDE+ + + VS+ T+I GY +EA
Sbjct: 72 KKG--NCLDLFANNILLNFYVKYDSLPDAAKLFDEMPDRNTVSFVTLIQGYSQCLRFSEA 129
Query: 216 FGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSM 275
GL ++++ + VF ++ L S+H+ + K G++++ + L+
Sbjct: 130 IGLFSRLQGEGHELNPFVFSTVLKLLVSAEWAKLGFSVHACVYKLGFDSDAFVGTALIDC 189
Query: 276 YTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATL 335
Y+ CG E AR+VFDA+ K + WT M+ Y + E++ LF R+ +PN T
Sbjct: 190 YSVCGYAECARQVFDAIEYKDMVSWTGMVACYVENECFEESLKLFSRMRIVGFKPNNFTF 249
Query: 336 ATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPD 395
A+ L AC L + GK + V LI ++ K G ++ A +VFE +P
Sbjct: 250 ASVLKACVGLEVFNVGKAVHGCAFKTSYLEELFVGVELIDLYIKSGDVDDALQVFEEMPK 309
Query: 396 KDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLK-PDAVVYTSILSACSHSGMVDDGL 454
D+ WS MI YA ++A+ +F +M+ GL P+ S+L AC + +VD L
Sbjct: 310 DDVIPWSFMIARYAQSEQSEEAIEMFCRMR--RGLVLPNQFTLASLLQAC--ASLVDLQL 365
Query: 455 -SFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMP 497
+ G++ ++ L+D+ + GR + +L+ E P
Sbjct: 366 GNQIHCHVVKVGLDMNVFVSNALMDMYAKCGRMENSLQLFSESP 409
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 90/362 (24%), Positives = 167/362 (46%), Gaps = 29/362 (8%)
Query: 233 VFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAV 292
++ +L+ C + G+ +H ++K G + +N+L++ Y K L A ++FD +
Sbjct: 46 IYGSLLQSCIRNGDCATGKYLHCEIIKKGNCLDLFANNILLNFYVKYDSLPDAAKLFDEM 105
Query: 293 LEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGK 352
+++ + ++I GY+Q SEA+ LF RL N +T L G
Sbjct: 106 PDRNTVSFVTLIQGYSQCLRFSEAIGLFSRLQGEGHELNPFVFSTVLKLLVSAEWAKLGF 165
Query: 353 EIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHG 412
+ + G +S+ V T+LI +S CG A++VF+ + KD+ W+ M+ Y +
Sbjct: 166 SVHACVYKLGFDSDAFVGTALIDCYSVCGYAECARQVFDAIEYKDMVSWTGMVACYVENE 225
Query: 413 MGDQALNLFYKMQHVEGLKPDAVVYTSILSACS-----HSGMVDDGLSFFKSMQSNF--G 465
+++L LF +M+ V G KP+ + S+L AC + G G +F S G
Sbjct: 226 CFEESLKLFSRMRIV-GFKPNNFTFASVLKACVGLEVFNVGKAVHGCAFKTSYLEELFVG 284
Query: 466 IEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAA 525
+E L+DL ++G D AL+ EMP + W+ +++ ++ E E A
Sbjct: 285 VE--------LIDLYIKSGDVDDALQVFEEMPKD-DVIPWSFMIA---RYAQSEQSEEAI 332
Query: 526 KNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVF 585
+ + G +++ N FT A + + A+ + D +L + V++ + VF
Sbjct: 333 EMFCRMRRG-----LVLPNQFTLASLLQACAS----LVDLQLGNQIHCHVVKVGLDMNVF 383
Query: 586 VA 587
V+
Sbjct: 384 VS 385
>gi|449497733|ref|XP_004160501.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g13650-like [Cucumis sativus]
Length = 1037
Score = 374 bits (959), Expect = e-100, Method: Compositional matrix adjust.
Identities = 203/622 (32%), Positives = 350/622 (56%), Gaps = 8/622 (1%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+I G + L ++ M + + + T +L ACA++ ++ G ++HSH +K G
Sbjct: 333 LISGLVQQGFSDRALELFTKMQRDCLKPDCITVASLLSACASVGALHKGMQLHSHAIKAG 392
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
D ++ L+D+YSKC+D ++ K + ++V WN ++ A+ + ++ +
Sbjct: 393 MSADIILEGSLLDLYSKCADVETAHKFF--LXTETENIVLWNVMLVAYGQLDNLSDSFEI 450
Query: 121 LKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
++M + G+ + T+ S++ C+ G +H V K G N + + + ++ MYA
Sbjct: 451 FRQMQMEGMIPNQFTYPSILRTCTSLGALYLGEQIHTHVIKTGFQLN-VYVCSVLIDMYA 509
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K+G++ A I + E +VSWT +I GYV +EA L +M + D + F +
Sbjct: 510 KYGQLALALRILRRLPEDDVVSWTAMIAGYVQHDMFSEALQLFEEMEYRGIQFDNIGFAS 569
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
I CA + L +H+ +G+ + ++N L+S+Y +CG ++ A F+ + +K+
Sbjct: 570 AISACAGIRALRQGQQIHAQSYAAGFGADLSINNALISLYARCGRIQEAYLAFEKIGDKN 629
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEE 356
W S++ G AQ GY EA+ +F R+L+T N T + +SA A L ++ +G++I
Sbjct: 630 NISWNSLVSGLAQSGYFEEALQVFVRMLRTEAEVNMFTYGSAISAAASLANIKQGQQIHS 689
Query: 357 YIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQ 416
++ G +S R+V SLI +++K G I+ A F + ++++ W+AMI GY+ HG G +
Sbjct: 690 MVLKTGYDSEREVSNSLISLYAKSGSISDAWREFNDMSERNVISWNAMITGYSQHGCGME 749
Query: 417 ALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCL 476
AL LF +M+ V G+ P+ V + +LSACSH G+V +GL +F+SM + P EHY+C+
Sbjct: 750 ALRLFEEMK-VCGIMPNHVTFVGVLSACSHIGLVKEGLDYFESMFKIHDLVPKSEHYVCV 808
Query: 477 VDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGST 536
VDLLGRAG+ D A++ I EMP+ A +W LLSAC+ H N+E+GE AA +LL L P +
Sbjct: 809 VDLLGRAGQLDRAMEYIKEMPIPADAMIWRTLLSACVIHKNIEIGERAAHHLLELEPEDS 868
Query: 537 GNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSV 596
Y+L++N++ + W +R LM D + KEPG S +E+ +V F AGD+ H L+
Sbjct: 869 ATYVLISNIYAVSRQWIHRDWSRKLMKDXGVKKEPGRSWIEVKNAVHAFYAGDKLHPLTN 928
Query: 597 DIRKTLKELHIKLLEAGYIAEA 618
I + + L+ + E GY+ ++
Sbjct: 929 QIYEYIGHLNRRTSEIGYVQDS 950
Score = 239 bits (610), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 151/488 (30%), Positives = 257/488 (52%), Gaps = 22/488 (4%)
Query: 13 ETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDG-KRVHSHVLKVGFQQDAFVQTGL 71
+ + ML G+ N +TF VLKAC + ++ K+VHS GF V L
Sbjct: 142 QVFCLFRRMLAEGITPNGYTFAGVLKACVGGDIAFNYVKQVHSRTFYYGFDSSPLVANLL 201
Query: 72 IDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEM------- 124
ID+YSK S++KV + + ++ +V+W ++IS S+ L +EAIL+ +M
Sbjct: 202 IDLYSKNGYIESAKKVFN--CICMKDIVTWVAMISGLSQNGLEEEAILLFCDMHASEIFP 259
Query: 125 --WVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVN 182
+VL LSAST + + F G +HC V K G ++E + N ++++Y++ K+
Sbjct: 260 TPYVLSSVLSASTKIQL-----FELGEQLHCLVIKWGF-HSETYVCNGLVALYSRSRKLI 313
Query: 183 EARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCA 242
A IF + VS+ ++I G V G + A L +M+R + PD + +L+ CA
Sbjct: 314 SAERIFSTMNSRDGVSYNSLISGLVQQGFSDRALELFTKMQRDCLKPDCITVASLLSACA 373
Query: 243 QVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTS 302
VG L + +HS +K+G + + L+ L+ +Y+KC D+E A + F +++ LW
Sbjct: 374 SVGALHKGMQLHSHAIKAGMSADIILEGSLLDLYSKCADVETAHKFFLXTETENIVLWNV 433
Query: 303 MIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNG 362
M+ Y QL S++ +F+++ + PN+ T + L C LG+L G++I +++ G
Sbjct: 434 MLVAYGQLDNLSDSFEIFRQMQMEGMIPNQFTYPSILRTCTSLGALYLGEQIHTHVIKTG 493
Query: 363 LESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFY 422
+ N V + LI M++K G++ A + R+P+ D+ W+AMI GY H M +AL LF
Sbjct: 494 FQLNVYVCSVLIDMYAKYGQLALALRILRRLPEDDVVSWTAMIAGYVQHDMFSEALQLFE 553
Query: 423 KMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFF-KSMQSNFGIEPSIEHYLCLVDLLG 481
+M++ G++ D + + S +SAC+ + G +S + FG + SI + L+ L
Sbjct: 554 EMEY-RGIQFDNIGFASAISACAGIRALRQGQQIHAQSYAAGFGADLSINN--ALISLYA 610
Query: 482 RAGRFDLA 489
R GR A
Sbjct: 611 RCGRIQEA 618
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 136/519 (26%), Positives = 257/519 (49%), Gaps = 10/519 (1%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI + NG EE + + M + + + VL A I G+++H V+K G
Sbjct: 232 MISGLSQNGLEEEAILLFCDMHASEIFPTPYVLSSVLSASTKIQLFELGEQLHCLVIKWG 291
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F + +V GL+ +YS+ +S+ ++ M R VS+NS+IS + +D A+ +
Sbjct: 292 FHSETYVCNGLVALYSRSRKLISAERIFSTMNS--RDGVSYNSLISGLVQQGFSDRALEL 349
Query: 121 LKEMWVLGLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
+M L+ T S++S C + +G+ +H K G ++ +I L S++ +Y+
Sbjct: 350 FTKMQRDCLKPDCITVASLLSACASVGALHKGMQLHSHAIKAG-MSADIILEGSLLDLYS 408
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K V A F +IV W ++ Y + N++++F + QM+ + P+ + +
Sbjct: 409 KCADVETAHKFFLXTETENIVLWNVMLVAYGQLDNLSDSFEIFRQMQMEGMIPNQFTYPS 468
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
++ C +G L+L +H+ ++K+G+ + ++L+ MY K G L LA R+ + E
Sbjct: 469 ILRTCTSLGALYLGEQIHTHVIKTGFQLNVYVCSVLIDMYAKYGQLALALRILRRLPEDD 528
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEE 356
V WT+MI GY Q SEA+ LF+ + ++ + A+ +SACA + +L +G++I
Sbjct: 529 VVSWTAMIAGYVQHDMFSEALQLFEEMEYRGIQFDNIGFASAISACAGIRALRQGQQIHA 588
Query: 357 YIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQ 416
G ++ + +LI ++++CGRI +A FE++ DK+ W+++++G A G ++
Sbjct: 589 QSYAAGFGADLSINNALISLYARCGRIQEAYLAFEKIGDKNNISWNSLVSGLAQSGYFEE 648
Query: 417 ALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCL 476
AL +F +M E + + Y S +SA + + G SM G + E L
Sbjct: 649 ALQVFVRMLRTEA-EVNMFTYGSAISAAASLANIKQGQQ-IHSMVLKTGYDSEREVSNSL 706
Query: 477 VDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKH 515
+ L ++G A + ++M E W +++ +H
Sbjct: 707 ISLYAKSGSISDAWREFNDMS-ERNVISWNAMITGYSQH 744
Score = 195 bits (496), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 133/529 (25%), Positives = 256/529 (48%), Gaps = 26/529 (4%)
Query: 5 STNNGSFEET-----------LSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVH 53
+TN+ SF++T + + M + GV N + +L+ C S+++ R+H
Sbjct: 22 ATNSHSFDQTTLHMEQGKSKRIQLMNFMEERGVRSNYQNYLWLLEGCLTSGSLFETMRLH 81
Query: 54 SHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACL 113
+ K GF + + L+D Y + D + KV DE RSV SWN +I
Sbjct: 82 CRISKSGFDGEPLLIDSLVDNYFRHGDQHGAVKVFDENSN--RSVFSWNKMIHVFVAQKS 139
Query: 114 NDEAILVLKEMWVLGLELSASTFVSVVSGC-----SFRQGISMHCCVYKLGLLNNEIPLA 168
N + + + M G+ + TF V+ C +F +H + G ++ + +A
Sbjct: 140 NFQVFCLFRRMLAEGITPNGYTFAGVLKACVGGDIAFNYVKQVHSRTFYYGFDSSPL-VA 198
Query: 169 NSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVT 228
N ++ +Y+K G + A+ +F+ I IV+W +I G G EA L M +
Sbjct: 199 NLLIDLYSKNGYIESAKKVFNCICMKDIVTWVAMISGLSQNGLEEEAILLFCDMHASEIF 258
Query: 229 PDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRV 288
P V +++ ++ L +H L++K G+++E + N LV++Y++ L A R+
Sbjct: 259 PTPYVLSSVLSASTKIQLFELGEQLHCLVIKWGFHSETYVCNGLVALYSRSRKLISAERI 318
Query: 289 FDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSL 348
F + + + S+I G Q G+ A+ LF ++ + ++P+ T+A+ LSACA +G+L
Sbjct: 319 FSTMNSRDGVSYNSLISGLVQQGFSDRALELFTKMQRDCLKPDCITVASLLSACASVGAL 378
Query: 349 SKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGY 408
KG ++ + + G+ ++ ++ SL+ ++SKC + A + F +++ +W+ M+ Y
Sbjct: 379 HKGMQLHSHAIKAGMSADIILEGSLLDLYSKCADVETAHKFFLXTETENIVLWNVMLVAY 438
Query: 409 AIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEP 468
+ +F +MQ +EG+ P+ Y SIL C+ G + G + G +
Sbjct: 439 GQLDNLSDSFEIFRQMQ-MEGMIPNQFTYPSILRTCTSLGALYLGEQIHTHVIKT-GFQL 496
Query: 469 SIEHYLC--LVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKH 515
++ Y+C L+D+ + G+ LAL+ + +P E W +++ ++H
Sbjct: 497 NV--YVCSVLIDMYAKYGQLALALRILRRLP-EDDVVSWTAMIAGYVQH 542
>gi|242076924|ref|XP_002448398.1| hypothetical protein SORBIDRAFT_06g026540 [Sorghum bicolor]
gi|241939581|gb|EES12726.1| hypothetical protein SORBIDRAFT_06g026540 [Sorghum bicolor]
Length = 865
Score = 374 bits (959), Expect = e-100, Method: Compositional matrix adjust.
Identities = 233/685 (34%), Positives = 357/685 (52%), Gaps = 77/685 (11%)
Query: 4 NSTNNGSFEE-----TLSTYSSMLQTGVHG-NSFTFPLVLKACANINSIWDGKRVHSHVL 57
N+ +G F+ +L ++ SM ++G N+FTF +K+C + ++ V
Sbjct: 106 NTLMSGYFQSQQYLASLESFVSMHRSGDSSPNAFTFAYAMKSCGALGERSLALQLLGMVQ 165
Query: 58 KVGFQQDAFVQTGLIDMYSKCSDF-VSSR------------------------------K 86
K G Q D+ V L+DM+ +C ++SR +
Sbjct: 166 KFGSQDDSDVAAALVDMFVRCGTVDLASRLFVRIKEPTIFCRNSMLVGYVKTYGVDHALE 225
Query: 87 VLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGC--- 143
+ D MP R VVSWN ++SA S++ EA+ ++ +M G+ L ++T+ S ++ C
Sbjct: 226 LFDSMPER--DVVSWNMMVSALSQSGRVREALDMVVDMQSKGVRLDSTTYTSSLTACARL 283
Query: 144 -SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTI 202
S R G +H V + L + +A++++ +YAK G EA+ +F+ + + + V+WT +
Sbjct: 284 SSLRWGKQLHAQVIR-NLPCIDPYVASALVELYAKCGCFKEAKGVFNSLHDRNNVAWTVL 342
Query: 203 IGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGY 262
I G++ G E+ L NQMR +T D LI GC +L L +HSL LKSG
Sbjct: 343 IAGFLQHGCFTESVELFNQMRAELMTLDQFALATLISGCCSRMDLCLGRQLHSLCLKSGQ 402
Query: 263 NNEDPLDNLLVSMYTKC-------------------------------GDLELARRVFDA 291
+ N L+SMY KC G++ AR FD
Sbjct: 403 IQAVVVSNSLISMYAKCDNLQSAESIFRFMNEKDIVSWTSMITAHSQVGNIAKAREFFDG 462
Query: 292 VLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLL-KTSVRPNEATLATTLSACAELGSLSK 350
+ K+V W +M+G Y Q G + + ++ +L + VRP+ T T CA+LG+
Sbjct: 463 MSTKNVITWNAMLGAYIQHGAEEDGLRMYNVMLSEKDVRPDWVTYVTLFKGCADLGANKL 522
Query: 351 GKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAI 410
G +I V GL + V ++I M+SKCGRI +A++VF+ + KD+ W+AMI GY+
Sbjct: 523 GDQIIGRTVKVGLILDTSVANAVITMYSKCGRILEARKVFDFLNVKDIVSWNAMITGYSQ 582
Query: 411 HGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSI 470
HGMG QA+ +F + G KPD + Y ++LS CSHSG+V +G S+F M+ I P +
Sbjct: 583 HGMGKQAIEIFDDILK-RGAKPDYISYVAVLSGCSHSGLVQEGKSYFDMMKRVHNISPGL 641
Query: 471 EHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLT 530
EH+ C+VDLLGRAG A I EMP++ A+VW LLSAC H N EL E AAK++
Sbjct: 642 EHFSCMVDLLGRAGHLTEAKDLIDEMPMKPTAEVWGALLSACKIHGNNELAELAAKHVFE 701
Query: 531 LNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDR 590
L+ +G+Y+LMA ++ AG ++A R LM D+ + K PG+S +E++ V VF A D
Sbjct: 702 LDSPDSGSYMLMAKIYADAGKSDDSAQIRKLMRDKGIKKNPGYSWMEVNNKVHVFKADDV 761
Query: 591 SHHLSVDIRKTLKELHIKLLEAGYI 615
SH + IRK L EL K+ GY+
Sbjct: 762 SHPQVIAIRKKLDELMEKIARLGYV 786
Score = 181 bits (460), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 131/499 (26%), Positives = 239/499 (47%), Gaps = 43/499 (8%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
M+ + +G E L M GV +S T+ L ACA ++S+ GK++H+ V++
Sbjct: 241 MVSALSQSGRVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNL 300
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
D +V + L+++Y+KC F ++ V + + R+ V+W +I+ + E++ +
Sbjct: 301 PCIDPYVASALVELYAKCGCFKEAKGVFNSL--HDRNNVAWTVLIAGFLQHGCFTESVEL 358
Query: 121 LKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGLLNNEIP---LANSVMSMYAK 177
+M + L +++SGC R + + ++ L L + +I ++NS++SMYAK
Sbjct: 359 FNQMRAELMTLDQFALATLISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISMYAK 418
Query: 178 FGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMR-------------- 223
+ A SIF + E IVSWT++I + VGN+ +A + M
Sbjct: 419 CDNLQSAESIFRFMNEKDIVSWTSMITAHSQVGNIAKAREFFDGMSTKNVITWNAMLGAY 478
Query: 224 ----------RM--------SVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNE 265
RM V PD V ++ L GCA +G L + +K G +
Sbjct: 479 IQHGAEEDGLRMYNVMLSEKDVRPDWVTYVTLFKGCADLGANKLGDQIIGRTVKVGLILD 538
Query: 266 DPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLK 325
+ N +++MY+KCG + AR+VFD + K + W +MI GY+Q G +A+ +F +LK
Sbjct: 539 TSVANAVITMYSKCGRILEARKVFDFLNVKDIVSWNAMITGYSQHGMGKQAIEIFDDILK 598
Query: 326 TSVRPNEATLATTLSACAELGSLSKGKEIEEYIV-LNGLESNRQVQTSLIHMFSKCGRIN 384
+P+ + LS C+ G + +GK + + ++ + + + ++ + + G +
Sbjct: 599 RGAKPDYISYVAVLSGCSHSGLVQEGKSYFDMMKRVHNISPGLEHFSCMVDLLGRAGHLT 658
Query: 385 KAKEVFERVPDKDLA-VWSAMINGYAIHGMGDQALNLFYKMQHVEGL-KPDAVVYTSILS 442
+AK++ + +P K A VW A+++ IHG + A +HV L PD+ Y +
Sbjct: 659 EAKDLIDEMPMKPTAEVWGALLSACKIHGNNELAE---LAAKHVFELDSPDSGSYMLMAK 715
Query: 443 ACSHSGMVDDGLSFFKSMQ 461
+ +G DD K M+
Sbjct: 716 IYADAGKSDDSAQIRKLMR 734
Score = 123 bits (308), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 108/513 (21%), Positives = 210/513 (40%), Gaps = 76/513 (14%)
Query: 32 TFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVL--- 88
F L++C ++ + +H ++ VG F+Q L+ Y C +R++L
Sbjct: 6 AFADALRSCGARGALAGARALHGRLVAVGLASAVFLQNTLLHAYLSCGALPDARRLLLTD 65
Query: 89 -----------------------------DEMPVRLRSVVSWNSIISAHSRACLNDEAIL 119
MP R V SWN+++S + ++ ++
Sbjct: 66 IAHPNVITHNVMLNGYVKLGRLSDAVELFGRMPA--RDVASWNTLMSGYFQSQQYLASLE 123
Query: 120 VLKEMWVLG-LELSASTFVSVVSGCSF----RQGISMHCCVYKLGLLNNEIPLANSVMSM 174
M G +A TF + C + + V K G ++ +A +++ M
Sbjct: 124 SFVSMHRSGDSSPNAFTFAYAMKSCGALGERSLALQLLGMVQKFG-SQDDSDVAAALVDM 182
Query: 175 YAKFGK-------------------------------VNEARSIFDEIGETSIVSWTTII 203
+ + G V+ A +FD + E +VSW ++
Sbjct: 183 FVRCGTVDLASRLFVRIKEPTIFCRNSMLVGYVKTYGVDHALELFDSMPERDVVSWNMMV 242
Query: 204 GGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYN 263
G V EA + M+ V D + + + CA++ +L +H+ ++++
Sbjct: 243 SALSQSGRVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPC 302
Query: 264 NEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRL 323
+ + + LV +Y KCG + A+ VF+++ +++ WT +I G+ Q G +E+V LF ++
Sbjct: 303 IDPYVASALVELYAKCGCFKEAKGVFNSLHDRNNVAWTVLIAGFLQHGCFTESVELFNQM 362
Query: 324 LKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRI 383
+ ++ LAT +S C L G+++ + +G V SLI M++KC +
Sbjct: 363 RAELMTLDQFALATLISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNL 422
Query: 384 NKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSA 443
A+ +F + +KD+ W++MI ++ G +A F M + + + ++L A
Sbjct: 423 QSAESIFRFMNEKDIVSWTSMITAHSQVGNIAKAREFFDGMS-----TKNVITWNAMLGA 477
Query: 444 CSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCL 476
G +DGL + M S + P Y+ L
Sbjct: 478 YIQHGAEEDGLRMYNVMLSEKDVRPDWVTYVTL 510
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 67/153 (43%), Gaps = 4/153 (2%)
Query: 337 TTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDK 396
T L A G+L + + ++ + N +++ + K GR++ A E+F R+P +
Sbjct: 44 TLLHAYLSCGALPDARRL---LLTDIAHPNVITHNVMLNGYVKLGRLSDAVELFGRMPAR 100
Query: 397 DLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSF 456
D+A W+ +++GY +L F M P+A + + +C G L
Sbjct: 101 DVASWNTLMSGYFQSQQYLASLESFVSMHRSGDSSPNAFTFAYAMKSCGALGERSLALQL 160
Query: 457 FKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLA 489
+Q FG + + LVD+ R G DLA
Sbjct: 161 LGMVQ-KFGSQDDSDVAAALVDMFVRCGTVDLA 192
>gi|225439588|ref|XP_002265522.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Vitis vinifera]
Length = 686
Score = 374 bits (959), Expect = e-100, Method: Compositional matrix adjust.
Identities = 203/559 (36%), Positives = 325/559 (58%), Gaps = 12/559 (2%)
Query: 71 LIDMYSKCS-DFVSS---RKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWV 126
L++M +CS DF + R + + ++ ++ WN++I D+AI M
Sbjct: 48 LLNMILRCSFDFSDTNYTRFLFHQ--IKQPNIFLWNTMIRGLVSNDCFDDAIEFYGLMRS 105
Query: 127 LGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVN 182
G + TF V+ C+ + G+ +H V K G + ++ + S++ +YAK G +
Sbjct: 106 EGFLPNNFTFPFVLKACARLLDLQLGVKIHTLVVKGGF-DCDVFVKTSLVCLYAKCGYLE 164
Query: 183 EARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCA 242
+A +FD+I + ++VSWT II GY+ VG EA + ++ M++ PD + ++ C
Sbjct: 165 DAHKVFDDIPDKNVVSWTAIISGYIGVGKFREAIDMFRRLLEMNLAPDSFTIVRVLSACT 224
Query: 243 QVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTS 302
Q+G+L +H +++ G + LV MY KCG++E AR VFD + EK + W +
Sbjct: 225 QLGDLNSGEWIHKCIMEMGMVRNVFVGTSLVDMYAKCGNMEKARSVFDGMPEKDIVSWGA 284
Query: 303 MIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNG 362
MI GYA G P EA++LF ++ + +V+P+ T+ LSACA LG+L G+ + + N
Sbjct: 285 MIQGYALNGLPKEAIDLFLQMQRENVKPDCYTVVGVLSACARLGALELGEWVSGLVDRNE 344
Query: 363 LESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFY 422
N + T+LI +++KCG +++A EVF+ + +KD VW+A+I+G A++G + LF
Sbjct: 345 FLYNPVLGTALIDLYAKCGSMSRAWEVFKGMKEKDRVVWNAIISGLAMNGYVKISFGLFG 404
Query: 423 KMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGR 482
+++ + G+KPD + +L C+H+G+VD+G +F SM F + PSIEHY C+VDLLGR
Sbjct: 405 QVEKL-GIKPDGNTFIGLLCGCTHAGLVDEGRRYFNSMYRFFSLTPSIEHYGCMVDLLGR 463
Query: 483 AGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILM 542
AG D A + I MP+E A VW LL AC H + +L E A K L+ L P ++GNY+L+
Sbjct: 464 AGLLDEAHQLIRNMPMEANAIVWGALLGACRIHRDTQLAELALKQLIELEPWNSGNYVLL 523
Query: 543 ANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTL 602
+N++++ W EAA R M+++R+ K PG S +E+DG V F+ GD+ H LS I L
Sbjct: 524 SNIYSANLKWDEAAKVRLSMNEKRIQKPPGCSWIEVDGIVHEFLVGDKYHPLSEKIYAKL 583
Query: 603 KELHIKLLEAGYIAEADIV 621
EL K+ AGY+ D V
Sbjct: 584 DELTKKMKVAGYVPTTDFV 602
Score = 215 bits (547), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 128/417 (30%), Positives = 216/417 (51%), Gaps = 9/417 (2%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MIR +N F++ + Y M G N+FTFP VLKACA + + G ++H+ V+K G
Sbjct: 83 MIRGLVSNDCFDDAIEFYGLMRSEGFLPNNFTFPFVLKACARLLDLQLGVKIHTLVVKGG 142
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F D FV+T L+ +Y+KC + KV D++P ++VVSW +IIS + EAI +
Sbjct: 143 FDCDVFVKTSLVCLYAKCGYLEDAHKVFDDIPD--KNVVSWTAIISGYIGVGKFREAIDM 200
Query: 121 LKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
+ + + L + T V V+S C+ G +H C+ ++G++ N + + S++ MYA
Sbjct: 201 FRRLLEMNLAPDSFTIVRVLSACTQLGDLNSGEWIHKCIMEMGMVRN-VFVGTSLVDMYA 259
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K G + +ARS+FD + E IVSW +I GY G EA L QM+R +V PD +
Sbjct: 260 KCGNMEKARSVFDGMPEKDIVSWGAMIQGYALNGLPKEAIDLFLQMQRENVKPDCYTVVG 319
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
++ CA++G L L + L+ ++ + L L+ +Y KCG + A VF + EK
Sbjct: 320 VLSACARLGALELGEWVSGLVDRNEFLYNPVLGTALIDLYAKCGSMSRAWEVFKGMKEKD 379
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKE-IE 355
+W ++I G A GY + LF ++ K ++P+ T L C G + +G+
Sbjct: 380 RVVWNAIISGLAMNGYVKISFGLFGQVEKLGIKPDGNTFIGLLCGCTHAGLVDEGRRYFN 439
Query: 356 EYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVP-DKDLAVWSAMINGYAIH 411
L + + ++ + + G +++A ++ +P + + VW A++ IH
Sbjct: 440 SMYRFFSLTPSIEHYGCMVDLLGRAGLLDEAHQLIRNMPMEANAIVWGALLGACRIH 496
>gi|147833186|emb|CAN68635.1| hypothetical protein VITISV_030802 [Vitis vinifera]
Length = 767
Score = 374 bits (959), Expect = e-100, Method: Compositional matrix adjust.
Identities = 229/655 (34%), Positives = 348/655 (53%), Gaps = 42/655 (6%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+ +N+T N + L+ ++ M V N+FTFP +LKACA + + +VH+++ ++G
Sbjct: 25 IAKNATQNP--QTALTFFTRMQAHAVPSNNFTFPALLKACAALRRLLPTLQVHAYLTRLG 82
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
D F L+D Y KC + +V DEMP VVSW ++ISA+S DEA
Sbjct: 83 LAADRFSAAALVDAYGKCGHAYYAAQVFDEMPEGSVDVVSWTALISAYSSNGCVDEAFXA 142
Query: 121 LKEM-WVLGLELSASTFVSVVS----------GCS---FRQGISMHCCVYKLGLLNNEIP 166
M W+ G + S V VVS GC R+G ++H V K G
Sbjct: 143 FGRMRWMRGWDGSECCGVDVVSLGALVSACAVGCGSNCLRRGSAVHGLVVKYGF-GVSTH 201
Query: 167 LANSVMSMYAKFGKVNEARSIFD--EIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQM-- 222
L NS++ MY+ V A +F+ I + +VSW ++I G+ G A M
Sbjct: 202 LGNSMVHMYSACKDVGGAWRVFNGIPIEQRDVVSWNSLISGFXLNGEAERALRTFEDMVS 261
Query: 223 -RRMSVTPDLVVFLNLILGCAQVGNLFLAL-------SMHSLLLKSGYNNEDPLDNLLVS 274
+V P+ V + L+ CA++G + + S HS LL + + + L+
Sbjct: 262 EGTSAVEPNRVTVIALLKSCAELGCVETSSWVHEYISSRHSSLLVA---KDVVVLTALLD 318
Query: 275 MYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLL------KTSV 328
M+ +CG+L LAR +FD V K+V W++MI GY Q P EA+ LF+++L V
Sbjct: 319 MHARCGNLALAREIFDGVEGKNVVCWSAMIAGYEQGSCPEEALRLFRQMLMEGNMVGVEV 378
Query: 329 RPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKE 388
+PN TL + ++AC+ LG+ I +Y V GL+ + ++ ++LI M +KCG I ++
Sbjct: 379 KPNAVTLVSVIAACSRLGASRSASMIHKYAVATGLDQDARIASALIDMCAKCGDIEHGRQ 438
Query: 389 VFERVPDKDLAV--WSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSH 446
VF + + V WS+MI IHG G +AL LF +M+ G +P+ + Y S+LSACSH
Sbjct: 439 VFSEMDESTRTVVSWSSMIGAEGIHGEGKRALELFSEMR-TGGYEPNEITYISVLSACSH 497
Query: 447 SGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWA 506
+G+V+ G S F SM+ ++G+ P+ +HY CLVDLLGRAG D A I MP++ +W
Sbjct: 498 AGLVEQGKSCFNSMEKDYGMSPTGKHYACLVDLLGRAGHLDEAHNVILNMPIKADLALWG 557
Query: 507 PLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRR 566
LL+AC H N +LGE K +L+L+ S G+++L+AN++ AG W + R +
Sbjct: 558 SLLAACHLHGNCKLGEIVEKKILSLDSNSVGHHVLLANMYEDAGRWDDVVRMRVELRRSG 617
Query: 567 LTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKELHIKLLEAG-YIAEADI 620
L K PG S +EI V F+A DRSH S I K L L ++ +A Y+ E +
Sbjct: 618 LRKIPGQSFIEIGNEVYSFMAEDRSHPESEMIYKELDGLDERVRKAAKYVTETGL 672
>gi|147801171|emb|CAN62238.1| hypothetical protein VITISV_014689 [Vitis vinifera]
Length = 957
Score = 373 bits (958), Expect = e-100, Method: Compositional matrix adjust.
Identities = 211/626 (33%), Positives = 354/626 (56%), Gaps = 10/626 (1%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI ++NG E L + M + + N++TF L+AC + + I G +H+ VLK
Sbjct: 253 MISAYSSNGQSIEALRLFGEMQKASLAPNTYTFVAALQACEDSSFIKQGMFIHATVLKSS 312
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+ + FV LI MY++ + + M +SWNS++S + L EA+
Sbjct: 313 YYINVFVANALIAMYARFGKMGEAANIFYNMDDW--DTISWNSMLSGFVQNGLYHEALQF 370
Query: 121 LKEMWVLGLELSASTFVSVVSGCSFR----QGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
EM G + +S+++ + G+ +H K GL ++++ + NS++ MYA
Sbjct: 371 YHEMRDAGQKPDLVAVISIIAASARSGNTLHGMQIHAYAMKNGL-DSDLQVGNSLVDMYA 429
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
KF + IFD++ + +VSWTTII G+ G+ + A L +++ + D+++ +
Sbjct: 430 KFCSMKYMDCIFDKMPDKDVVSWTTIIAGHAQNGSHSRALELFREVQLEGIDLDVMMISS 489
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
++L C+ + + +HS +++ G ++ L N +V +Y +CG+++ A R+F+ + K
Sbjct: 490 ILLACSGLKLISSVKEIHSYIIRKGLSDL-VLQNGIVDVYGECGNVDYAARMFELIEFKD 548
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEE 356
V WTSMI Y G +EA+ LF + +T V P+ +L + LSA A L +L KGKEI
Sbjct: 549 VVSWTSMISCYVHNGLANEALELFHLMKETGVEPDSISLVSILSAAASLSALKKGKEIHG 608
Query: 357 YIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQ 416
+++ G + ++L+ M+++CG + K++ VF + +KDL +W++MIN Y +HG G
Sbjct: 609 FLIRKGFVLEGSLASTLVDMYARCGTLEKSRNVFNFIRNKDLVLWTSMINAYGMHGCGRA 668
Query: 417 ALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCL 476
A++LF +M+ E + PD + + ++L ACSHSG++++G F +SM+ + +EP EHY CL
Sbjct: 669 AIDLFRRMED-ESIAPDHIAFVAVLYACSHSGLMNEGRRFLESMKYEYQLEPWPEHYACL 727
Query: 477 VDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGST 536
VDLLGRA + A + + M VE A+VW LL AC H N ELGE AA+ LL ++P +
Sbjct: 728 VDLLGRANHLEEAYQFVKGMEVEPTAEVWCALLGACQIHSNKELGEIAAQKLLEMDPENP 787
Query: 537 GNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSV 596
GNY+L++N++++ WK+ R M L K PG S +E+ V F+A D+SH S
Sbjct: 788 GNYVLVSNVYSAERRWKDVEXVRMRMKASGLKKNPGCSWIEVGNKVHTFMARDKSHPQSY 847
Query: 597 DIRKTLKELHIKLL-EAGYIAEADIV 621
+I L ++ KL E GY+A+ V
Sbjct: 848 EIYSKLSQITEKLAKEGGYVAQTKFV 873
Score = 256 bits (654), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 157/492 (31%), Positives = 269/492 (54%), Gaps = 11/492 (2%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI NG +L Y M +G+ ++ TFP +LKAC + G VH +K G
Sbjct: 151 MIGAYVTNGEPLGSLELYREMRVSGIPLDACTFPCILKACGLLKDRRYGAEVHGLAIKEG 210
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+ FV ++ MY+KC+D +R++ D MP + VVSWNS+ISA+S + EA+ +
Sbjct: 211 YVSIVFVANSIVGMYTKCNDLNGARQLFDRMPEK-EDVVSWNSMISAYSSNGQSIEALRL 269
Query: 121 LKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
EM L + TFV+ + C +QG+ +H V K N + +AN++++MYA
Sbjct: 270 FGEMQKASLAPNTYTFVAALQACEDSSFIKQGMFIHATVLKSSYYIN-VFVANALIAMYA 328
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
+FGK+ EA +IF + + +SW +++ G+V G +EA ++MR PDLV ++
Sbjct: 329 RFGKMGEAANIFYNMDDWDTISWNSMLSGFVQNGLYHEALQFYHEMRDAGQKPDLVAVIS 388
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
+I A+ GN + +H+ +K+G +++ + N LV MY K ++ +FD + +K
Sbjct: 389 IIAASARSGNTLHGMQIHAYAMKNGLDSDLQVGNSLVDMYAKFCSMKYMDCIFDKMPDKD 448
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEE 356
V WT++I G+AQ G S A+ LF+ + + + +++ L AC+ L +S KEI
Sbjct: 449 VVSWTTIIAGHAQNGSHSRALELFREVQLEGIDLDVMMISSILLACSGLKLISSVKEIHS 508
Query: 357 YIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQ 416
YI+ GL S+ +Q ++ ++ +CG ++ A +FE + KD+ W++MI+ Y +G+ ++
Sbjct: 509 YIIRKGL-SDLVLQNGIVDVYGECGNVDYAARMFELIEFKDVVSWTSMISCYVHNGLANE 567
Query: 417 ALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSM-QSNFGIEPSIEHYLC 475
AL LF+ M+ G++PD++ SILSA + + G + + F +E S+
Sbjct: 568 ALELFHLMKET-GVEPDSISLVSILSAAASLSALKKGKEIHGFLIRKGFVLEGSLAS--T 624
Query: 476 LVDLLGRAGRFD 487
LVD+ R G +
Sbjct: 625 LVDMYARCGTLE 636
Score = 209 bits (532), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 134/467 (28%), Positives = 242/467 (51%), Gaps = 22/467 (4%)
Query: 36 VLKACANINSIWDGKRVHSHVLKV-GFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVR 94
VL+ C + ++ +G++VH+H++ F+ T L+ MY KC V + K+ D MP
Sbjct: 84 VLELCGSKKALSEGQQVHAHMITSNALFNSVFLSTRLVFMYGKCGCLVDAEKLFDGMP-- 141
Query: 95 LRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCSF----RQGIS 150
+++ +WN++I A+ ++ + +EM V G+ L A TF ++ C R G
Sbjct: 142 HKTIFTWNAMIGAYVTNGEPLGSLELYREMRVSGIPLDACTFPCILKACGLLKDRRYGAE 201
Query: 151 MHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETS-IVSWTTIIGGYVNV 209
+H K G ++ + +ANS++ MY K +N AR +FD + E +VSW ++I Y +
Sbjct: 202 VHGLAIKEGYVSI-VFVANSIVGMYTKCNDLNGARQLFDRMPEKEDVVSWNSMISAYSSN 260
Query: 210 GNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLD 269
G EA L +M++ S+ P+ F+ + C + + +H+ +LKS Y +
Sbjct: 261 GQSIEALRLFGEMQKASLAPNTYTFVAALQACEDSSFIKQGMFIHATVLKSSYYINVFVA 320
Query: 270 NLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVR 329
N L++MY + G + A +F + + W SM+ G+ Q G EA+ + + +
Sbjct: 321 NALIAMYARFGKMGEAANIFYNMDDWDTISWNSMLSGFVQNGLYHEALQFYHEMRDAGQK 380
Query: 330 PNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEV 389
P+ + + ++A A G+ G +I Y + NGL+S+ QV SL+ M++K + +
Sbjct: 381 PDLVAVISIIAASARSGNTLHGMQIHAYAMKNGLDSDLQVGNSLVDMYAKFCSMKYMDCI 440
Query: 390 FERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGM 449
F+++PDKD+ W+ +I G+A +G +AL LF ++Q +EG+ D ++ +SIL ACS
Sbjct: 441 FDKMPDKDVVSWTTIIAGHAQNGSHSRALELFREVQ-LEGIDLDVMMISSILLACS---- 495
Query: 450 VDDGLSFFKSMQS--NFGIEPSIEHYLC---LVDLLGRAGRFDLALK 491
GL S++ ++ I + + +VD+ G G D A +
Sbjct: 496 ---GLKLISSVKEIHSYIIRKGLSDLVLQNGIVDVYGECGNVDYAAR 539
>gi|225444329|ref|XP_002264248.1| PREDICTED: pentatricopeptide repeat-containing protein At1g11290
[Vitis vinifera]
Length = 767
Score = 373 bits (958), Expect = e-100, Method: Compositional matrix adjust.
Identities = 229/655 (34%), Positives = 348/655 (53%), Gaps = 42/655 (6%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+ +N+T N + L+ ++ M V N+FTFP +LKACA + + +VH+++ ++G
Sbjct: 25 IAKNATQNP--QTALTFFTRMQAHAVPSNNFTFPALLKACAALRRLLPTLQVHAYLTRLG 82
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
D F L+D Y KC + +V DEMP VVSW ++ISA+S DEA
Sbjct: 83 LAADRFSAAALVDAYGKCGHAYYAAQVFDEMPEGSVDVVSWTALISAYSSNGCVDEAFKA 142
Query: 121 LKEM-WVLGLELSASTFVSVVS----------GCS---FRQGISMHCCVYKLGLLNNEIP 166
M W+ G + S V VVS GC R+G ++H V K G
Sbjct: 143 FGRMRWMRGWDGSECCGVDVVSLGALVSACAVGCGSNCLRRGSAVHGLVVKYGF-GVSTH 201
Query: 167 LANSVMSMYAKFGKVNEARSIFD--EIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQM-- 222
L NS++ MY+ V A +F+ I + +VSW ++I G+ G A M
Sbjct: 202 LGNSMVHMYSACKDVGGAWRVFNGIPIEQRDVVSWNSLISGFTLNGEAERALRTFEDMVS 261
Query: 223 -RRMSVTPDLVVFLNLILGCAQVGNLFLAL-------SMHSLLLKSGYNNEDPLDNLLVS 274
+V P+ V + L+ CA++G + + S HS LL + + + L+
Sbjct: 262 EGTSAVEPNRVTVIALLKSCAELGCVETSSWVHEYISSRHSSLLVA---KDVVVLTALLD 318
Query: 275 MYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLL------KTSV 328
M+ +CG+L LAR +FD V K+V W++MI GY Q P EA+ LF+++L V
Sbjct: 319 MHARCGNLALAREIFDGVEGKNVVCWSAMIAGYEQGSCPEEALRLFRQMLMEGNMVGVEV 378
Query: 329 RPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKE 388
+PN TL + ++AC+ LG+ I +Y V GL+ + ++ ++LI M +KCG I ++
Sbjct: 379 KPNAVTLVSVIAACSRLGASRSASMIHKYAVATGLDQDARIASALIDMCAKCGDIEHGRQ 438
Query: 389 VFERVPDKDLAV--WSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSH 446
VF + + V WS+MI IHG G +AL LF +M+ G +P+ + Y S+LSACSH
Sbjct: 439 VFSEMDESTRTVVSWSSMIGAEGIHGEGKRALELFSEMR-TGGYEPNEITYISVLSACSH 497
Query: 447 SGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWA 506
+G+V+ G S F SM+ ++G+ P+ +HY CLVDLLGRAG D A I MP++ +W
Sbjct: 498 AGLVEQGKSCFNSMEKDYGMSPTGKHYACLVDLLGRAGHLDEAHNVILNMPIKADLALWG 557
Query: 507 PLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRR 566
LL+AC H N +LGE K +L+L+ S G+++L+AN++ AG W + R +
Sbjct: 558 SLLAACHLHGNCKLGEIVEKKILSLDSNSVGHHVLLANMYEDAGRWDDVVRMRVELRRSG 617
Query: 567 LTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKELHIKLLEAG-YIAEADI 620
L K PG S +EI V F+A DRSH S I K L L ++ +A Y+ E +
Sbjct: 618 LRKIPGQSFIEIGNEVYSFMAEDRSHPESEMIYKELDGLDERVRKAAKYVTETGL 672
>gi|224057824|ref|XP_002299342.1| predicted protein [Populus trichocarpa]
gi|222846600|gb|EEE84147.1| predicted protein [Populus trichocarpa]
Length = 684
Score = 373 bits (957), Expect = e-100, Method: Compositional matrix adjust.
Identities = 203/606 (33%), Positives = 329/606 (54%), Gaps = 10/606 (1%)
Query: 21 MLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSD 80
M G+ + ++ + +AC I S++DG+ H + + F++ ++ MY KC
Sbjct: 1 MEDAGISVSPRSYKCLFEACGKIKSLFDGRLFHEQMQRTVKNPPEFLENSVLKMYCKCGS 60
Query: 81 FVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFV--- 137
+RKV DEM R R++VSWN+IISA++ + D+ + M L + + ST++
Sbjct: 61 LADARKVFDEM--RERNLVSWNTIISAYAENGVFDKGFCMFSNMLELETKPNGSTYIGFL 118
Query: 138 -SVVSGCSFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSI 196
S+++ G +H + GL +N + ++ +MY K G + A +F+++ E +
Sbjct: 119 RSLLNPSGLEIGKQIHSHAIRSGLGSN-ASVNTAISNMYVKCGWLEGAELVFEKMSEKNA 177
Query: 197 VSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSL 256
V+WT I+ GY +A L +M V D VF ++ CA + L +H
Sbjct: 178 VAWTGIMVGYTQAERQMDALALFAKMVNEGVELDEYVFSIVLKACAGLEELNFGRQIHGH 237
Query: 257 LLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEA 316
++K G +E + LV Y KC +LE A + F+ + E + W+++I GY Q+G EA
Sbjct: 238 IVKLGLESEVSVGTPLVDFYVKCSNLESATKAFEWISEPNDVSWSALITGYCQMGEFEEA 297
Query: 317 VNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHM 376
+ F+ L SV N T + AC+ L + G + + + L + + ++++I M
Sbjct: 298 LKTFESLRTRSVDINSFTYTSIFQACSALADFNSGAQAHADAIKSSLVAYQHGESAMITM 357
Query: 377 FSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVV 436
+S+CGR++ A VFE + D D W+A+I GYA G +AL LF +MQ G++P+AV
Sbjct: 358 YSRCGRLDYATRVFESIDDPDAVAWTAIIAGYAYQGNAPEALKLFRRMQDC-GVRPNAVT 416
Query: 437 YTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEM 496
+ ++L+ACSHSG+V +G + +SM SN+G+ +I+HY C+VD+ RAG AL+ I M
Sbjct: 417 FIAVLTACSHSGLVIEGRQYLESMSSNYGVATTIDHYDCMVDIYSRAGFLQEALELIRSM 476
Query: 497 PVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAA 556
P A W LL C + N+E+GE AA+NL L+P T YILM NL+ S G WKEAA
Sbjct: 477 PFSPDAMSWKCLLGGCWTYRNLEIGELAAENLFQLDPEDTAGYILMFNLYASFGKWKEAA 536
Query: 557 TARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKELHIKLL--EAGY 614
R +M +R L KE S + + G V F+ GD+ H + +I L+ L+ ++ E G
Sbjct: 537 NVRKMMAERNLRKELSCSWITVKGKVHRFIVGDKHHPQTEEIYSKLEALNDSVIKEETGL 596
Query: 615 IAEADI 620
+ E D+
Sbjct: 597 LTEEDV 602
Score = 181 bits (460), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 112/418 (26%), Positives = 205/418 (49%), Gaps = 19/418 (4%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+I NG F++ +S+ML+ N T+ L++ N + + GK++HSH ++ G
Sbjct: 82 IISAYAENGVFDKGFCMFSNMLELETKPNGSTYIGFLRSLLNPSGLEIGKQIHSHAIRSG 141
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+A V T + +MY KC + V ++M ++ V+W I+ +++A +A+ +
Sbjct: 142 LGSNASVNTAISNMYVKCGWLEGAELVFEKMSE--KNAVAWTGIMVGYTQAERQMDALAL 199
Query: 121 LKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
+M G+EL F V+ C+ G +H + KLG L +E+ + ++ Y
Sbjct: 200 FAKMVNEGVELDEYVFSIVLKACAGLEELNFGRQIHGHIVKLG-LESEVSVGTPLVDFYV 258
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K + A F+ I E + VSW+ +I GY +G EA +R SV + + +
Sbjct: 259 KCSNLESATKAFEWISEPNDVSWSALITGYCQMGEFEEALKTFESLRTRSVDINSFTYTS 318
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
+ C+ + + H+ +KS ++ +++MY++CG L+ A RVF+++ +
Sbjct: 319 IFQACSALADFNSGAQAHADAIKSSLVAYQHGESAMITMYSRCGRLDYATRVFESIDDPD 378
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEE 356
WT++I GYA G EA+ LF+R+ VRPN T L+AC+ G + +G++
Sbjct: 379 AVAWTAIIAGYAYQGNAPEALKLFRRMQDCGVRPNAVTFIAVLTACSHSGLVIEGRQ--- 435
Query: 357 YIVLNGLESNRQVQTSLIH------MFSKCGRINKAKEVFERVP-DKDLAVWSAMING 407
L + SN V T++ H ++S+ G + +A E+ +P D W ++ G
Sbjct: 436 --YLESMSSNYGVATTIDHYDCMVDIYSRAGFLQEALELIRSMPFSPDAMSWKCLLGG 491
>gi|359495457|ref|XP_003634994.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g63370-like [Vitis vinifera]
Length = 993
Score = 373 bits (957), Expect = e-100, Method: Compositional matrix adjust.
Identities = 211/626 (33%), Positives = 354/626 (56%), Gaps = 10/626 (1%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI ++NG E L + M + + N++TF L+AC + + I G +H+ VLK
Sbjct: 289 MISAYSSNGQSIEALRLFGEMQKASLAPNTYTFVAALQACEDSSFIKQGMFIHATVLKSS 348
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+ + FV LI MY++ + + M +SWNS++S + L EA+
Sbjct: 349 YYINVFVANALIAMYARFGKMGEAANIFYNMDDW--DTISWNSMLSGFVQNGLYHEALQF 406
Query: 121 LKEMWVLGLELSASTFVSVVSGCSFR----QGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
EM G + +S+++ + G+ +H K GL ++++ + NS++ MYA
Sbjct: 407 YHEMRDAGQKPDLVAVISIIAASARSGNTLNGMQIHAYAMKNGL-DSDLQVGNSLVDMYA 465
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
KF + IFD++ + +VSWTTII G+ G+ + A L +++ + D+++ +
Sbjct: 466 KFCSMKYMDCIFDKMPDKDVVSWTTIIAGHAQNGSHSRALELFREVQLEGIDLDVMMISS 525
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
++L C+ + + +HS +++ G ++ L N +V +Y +CG+++ A R+F+ + K
Sbjct: 526 ILLACSGLKLISSVKEIHSYIIRKGLSDL-VLQNGIVDVYGECGNVDYAARMFELIEFKD 584
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEE 356
V WTSMI Y G +EA+ LF + +T V P+ +L + LSA A L +L KGKEI
Sbjct: 585 VVSWTSMISCYVHNGLANEALELFHLMKETGVEPDSISLVSILSAAASLSALKKGKEIHG 644
Query: 357 YIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQ 416
+++ G + ++L+ M+++CG + K++ VF + +KDL +W++MIN Y +HG G
Sbjct: 645 FLIRKGFVLEGSLASTLVDMYARCGTLEKSRNVFNFIRNKDLVLWTSMINAYGMHGCGRA 704
Query: 417 ALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCL 476
A++LF +M+ E + PD + + ++L ACSHSG++++G F +SM+ + +EP EHY+CL
Sbjct: 705 AIDLFRRMED-ESIAPDHIAFVAVLYACSHSGLMNEGRRFLESMKYEYQLEPWPEHYVCL 763
Query: 477 VDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGST 536
VDLLGRA + A + + M VE A+VW LL AC H N ELGE AA+ LL ++P +
Sbjct: 764 VDLLGRANHLEEAYQFVKGMEVEPTAEVWCALLGACQIHSNKELGEIAAQKLLEMDPENP 823
Query: 537 GNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSV 596
GNY+L++N++ + WK+ R M L K PG S +E+ V F+A D+SH S
Sbjct: 824 GNYVLVSNVYAAERRWKDVEEVRMRMKASGLKKNPGCSWIEVGNKVHTFMARDKSHPQSY 883
Query: 597 DIRKTLKELHIKLL-EAGYIAEADIV 621
+I L ++ KL E GY+A+ V
Sbjct: 884 EIYSKLSQITEKLAKEGGYVAQTKFV 909
Score = 255 bits (652), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 157/492 (31%), Positives = 269/492 (54%), Gaps = 11/492 (2%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI NG +L Y M +G+ ++ TFP +LKAC + G VH +K G
Sbjct: 187 MIGAYVTNGEPLGSLELYREMRVSGIPLDACTFPCILKACGLLKDRRCGAEVHGLAIKEG 246
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+ FV ++ MY+KC+D +R++ D MP + VVSWNS+ISA+S + EA+ +
Sbjct: 247 YVSIVFVANSIVGMYTKCNDLNGARQLFDRMPEK-EDVVSWNSMISAYSSNGQSIEALRL 305
Query: 121 LKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
EM L + TFV+ + C +QG+ +H V K N + +AN++++MYA
Sbjct: 306 FGEMQKASLAPNTYTFVAALQACEDSSFIKQGMFIHATVLKSSYYIN-VFVANALIAMYA 364
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
+FGK+ EA +IF + + +SW +++ G+V G +EA ++MR PDLV ++
Sbjct: 365 RFGKMGEAANIFYNMDDWDTISWNSMLSGFVQNGLYHEALQFYHEMRDAGQKPDLVAVIS 424
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
+I A+ GN + +H+ +K+G +++ + N LV MY K ++ +FD + +K
Sbjct: 425 IIAASARSGNTLNGMQIHAYAMKNGLDSDLQVGNSLVDMYAKFCSMKYMDCIFDKMPDKD 484
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEE 356
V WT++I G+AQ G S A+ LF+ + + + +++ L AC+ L +S KEI
Sbjct: 485 VVSWTTIIAGHAQNGSHSRALELFREVQLEGIDLDVMMISSILLACSGLKLISSVKEIHS 544
Query: 357 YIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQ 416
YI+ GL S+ +Q ++ ++ +CG ++ A +FE + KD+ W++MI+ Y +G+ ++
Sbjct: 545 YIIRKGL-SDLVLQNGIVDVYGECGNVDYAARMFELIEFKDVVSWTSMISCYVHNGLANE 603
Query: 417 ALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSM-QSNFGIEPSIEHYLC 475
AL LF+ M+ G++PD++ SILSA + + G + + F +E S+
Sbjct: 604 ALELFHLMKET-GVEPDSISLVSILSAAASLSALKKGKEIHGFLIRKGFVLEGSLAS--T 660
Query: 476 LVDLLGRAGRFD 487
LVD+ R G +
Sbjct: 661 LVDMYARCGTLE 672
Score = 208 bits (529), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 134/467 (28%), Positives = 242/467 (51%), Gaps = 22/467 (4%)
Query: 36 VLKACANINSIWDGKRVHSHVLKV-GFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVR 94
VL+ C + ++ +G++VH+H++ F+ T L+ MY KC V + K+ D MP
Sbjct: 120 VLELCGSKKALSEGQQVHAHMITSNALFNSVFLSTRLVFMYGKCGCLVDAEKLFDGMP-- 177
Query: 95 LRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCSF----RQGIS 150
+++ +WN++I A+ ++ + +EM V G+ L A TF ++ C R G
Sbjct: 178 HKTIFTWNAMIGAYVTNGEPLGSLELYREMRVSGIPLDACTFPCILKACGLLKDRRCGAE 237
Query: 151 MHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGET-SIVSWTTIIGGYVNV 209
+H K G ++ + +ANS++ MY K +N AR +FD + E +VSW ++I Y +
Sbjct: 238 VHGLAIKEGYVSI-VFVANSIVGMYTKCNDLNGARQLFDRMPEKEDVVSWNSMISAYSSN 296
Query: 210 GNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLD 269
G EA L +M++ S+ P+ F+ + C + + +H+ +LKS Y +
Sbjct: 297 GQSIEALRLFGEMQKASLAPNTYTFVAALQACEDSSFIKQGMFIHATVLKSSYYINVFVA 356
Query: 270 NLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVR 329
N L++MY + G + A +F + + W SM+ G+ Q G EA+ + + +
Sbjct: 357 NALIAMYARFGKMGEAANIFYNMDDWDTISWNSMLSGFVQNGLYHEALQFYHEMRDAGQK 416
Query: 330 PNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEV 389
P+ + + ++A A G+ G +I Y + NGL+S+ QV SL+ M++K + +
Sbjct: 417 PDLVAVISIIAASARSGNTLNGMQIHAYAMKNGLDSDLQVGNSLVDMYAKFCSMKYMDCI 476
Query: 390 FERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGM 449
F+++PDKD+ W+ +I G+A +G +AL LF ++Q +EG+ D ++ +SIL ACS
Sbjct: 477 FDKMPDKDVVSWTTIIAGHAQNGSHSRALELFREVQ-LEGIDLDVMMISSILLACS---- 531
Query: 450 VDDGLSFFKSMQS--NFGIEPSIEHYLC---LVDLLGRAGRFDLALK 491
GL S++ ++ I + + +VD+ G G D A +
Sbjct: 532 ---GLKLISSVKEIHSYIIRKGLSDLVLQNGIVDVYGECGNVDYAAR 575
>gi|449491572|ref|XP_004158941.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Cucumis sativus]
Length = 1004
Score = 373 bits (957), Expect = e-100, Method: Compositional matrix adjust.
Identities = 197/625 (31%), Positives = 345/625 (55%), Gaps = 8/625 (1%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
++ G L + SM++ V N FT VLK CAN ++ G+ +HS ++K G
Sbjct: 285 LLNGYAQRGDVTGVLKLFCSMMELDVKCNEFTLTTVLKGCANSKNLKQGQVIHSLIIKCG 344
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
++ + F+ GL+DMYSKC + + V ++ +V W+++I+ + ++E+I +
Sbjct: 345 YEGNEFIGCGLVDMYSKCGLAIDAIGVFK--TIKKPDIVVWSALITCLDQQGQSEESIKL 402
Query: 121 LKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
M + + T S++S + + G S+H CV+K G ++ ++N++++MY
Sbjct: 403 FHLMRLGDTLPNQYTICSLLSAATNTGNLQYGQSIHACVWKYGF-ETDVAVSNALVTMYM 461
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K G V++ +++ + + ++SW + G + G + + M P++ F++
Sbjct: 462 KNGCVHDGTKLYESMVDRDLISWNAYLSGLHDCGMYDRPLTIFYHMLEEGFIPNMYTFIS 521
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
++ C+ + ++ +H+ ++K+ ++ + + L+ MY KC LE A F+ + +
Sbjct: 522 ILGSCSCLFDVHYGRQVHAHIIKNQLDDNNFVCTALIDMYAKCMYLEDADVAFNRLSVRD 581
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEE 356
+F WT +I YAQ +A+N F+++ + V+PNE TLA LS C+ L SL G+++
Sbjct: 582 LFTWTVIITNYAQTNQGEKALNYFRQMQQEGVKPNEFTLAGCLSGCSSLASLEGGQQLHS 641
Query: 357 YIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQ 416
+ +G S+ V ++L+ M++KCG + +A+ +FE + +D W+ +I GYA +G G++
Sbjct: 642 MVFKSGHVSDMFVGSALVDMYAKCGCMEEAEALFEALIRRDTIAWNTIICGYAQNGQGNK 701
Query: 417 ALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCL 476
AL F +M EG+ PD V +T ILSACSH G+V++G F SM +FGI P+++H C+
Sbjct: 702 ALTAF-RMMLDEGISPDGVTFTGILSACSHQGLVEEGKEHFNSMYRDFGISPTVDHCACM 760
Query: 477 VDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGST 536
VD+LGR G+FD I +M + A +W +L A H+N+ LGE AA L L P
Sbjct: 761 VDILGRVGKFDELEDFIQKMQLSQNALIWETVLGASKMHNNLVLGEKAANKLFELQPEEE 820
Query: 537 GNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSV 596
+YIL++N+F + G W + R LM + + KEPG S VE +G V FV+ D SH
Sbjct: 821 SSYILLSNIFATEGRWDDVKRVRSLMSSKGVKKEPGCSWVEANGQVHTFVSHDYSHPQIQ 880
Query: 597 DIRKTLKELHIKLLEAGYIAEADIV 621
+I L EL +L Y+ + + V
Sbjct: 881 EIHLKLDELDRELASIQYVPKTEYV 905
Score = 205 bits (522), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 123/457 (26%), Positives = 227/457 (49%), Gaps = 8/457 (1%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+I+ G +++ + M G+ N FT LKAC+ ++ GK++H+ K+G
Sbjct: 184 LIQGLVAEGFANDSIYLFQEMQNEGIMPNEFTLATGLKACSLCMALDLGKQMHAQAFKLG 243
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
D FV + L+D+Y+KC + + K+ MP ++ V+WN +++ +++ + +
Sbjct: 244 LLLDLFVGSALVDLYAKCGEIELASKMFIGMPE--QNDVTWNVLLNGYAQRGDVTGVLKL 301
Query: 121 LKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
M L ++ + T +V+ GC+ +QG +H + K G NE + ++ MY+
Sbjct: 302 FCSMMELDVKCNEFTLTTVLKGCANSKNLKQGQVIHSLIIKCGYEGNEF-IGCGLVDMYS 360
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K G +A +F I + IV W+ +I G E+ L + MR P+ +
Sbjct: 361 KCGLAIDAIGVFKTIKKPDIVVWSALITCLDQQGQSEESIKLFHLMRLGDTLPNQYTICS 420
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
L+ GNL S+H+ + K G+ + + N LV+MY K G + +++++++++
Sbjct: 421 LLSAATNTGNLQYGQSIHACVWKYGFETDVAVSNALVTMYMKNGCVHDGTKLYESMVDRD 480
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEE 356
+ W + + G G + +F +L+ PN T + L +C+ L + G+++
Sbjct: 481 LISWNAYLSGLHDCGMYDRPLTIFYHMLEEGFIPNMYTFISILGSCSCLFDVHYGRQVHA 540
Query: 357 YIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQ 416
+I+ N L+ N V T+LI M++KC + A F R+ +DL W+ +I YA G++
Sbjct: 541 HIIKNQLDDNNFVCTALIDMYAKCMYLEDADVAFNRLSVRDLFTWTVIITNYAQTNQGEK 600
Query: 417 ALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDG 453
ALN F +MQ EG+KP+ LS CS ++ G
Sbjct: 601 ALNYFRQMQQ-EGVKPNEFTLAGCLSGCSSLASLEGG 636
Score = 193 bits (490), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 121/414 (29%), Positives = 211/414 (50%), Gaps = 8/414 (1%)
Query: 36 VLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRL 95
+L+ CA+ S+ K +H ++K D+ + L+++Y+KC +R VL +MP R
Sbjct: 118 MLRECASKRSLGVAKAIHGLIVKDVINPDSHLWVSLVNVYAKCRYSAYARLVLAKMPDR- 176
Query: 96 RSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCSFRQ----GISM 151
VVSW ++I +++I + +EM G+ + T + + CS G M
Sbjct: 177 -DVVSWTALIQGLVAEGFANDSIYLFQEMQNEGIMPNEFTLATGLKACSLCMALDLGKQM 235
Query: 152 HCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGN 211
H +KLGLL ++ + ++++ +YAK G++ A +F + E + V+W ++ GY G+
Sbjct: 236 HAQAFKLGLLL-DLFVGSALVDLYAKCGEIELASKMFIGMPEQNDVTWNVLLNGYAQRGD 294
Query: 212 VNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNL 271
V L M + V + ++ GCA NL +HSL++K GY + +
Sbjct: 295 VTGVLKLFCSMMELDVKCNEFTLTTVLKGCANSKNLKQGQVIHSLIIKCGYEGNEFIGCG 354
Query: 272 LVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPN 331
LV MY+KCG A VF + + + +W+++I Q G E++ LF + PN
Sbjct: 355 LVDMYSKCGLAIDAIGVFKTIKKPDIVVWSALITCLDQQGQSEESIKLFHLMRLGDTLPN 414
Query: 332 EATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFE 391
+ T+ + LSA G+L G+ I + G E++ V +L+ M+ K G ++ +++E
Sbjct: 415 QYTICSLLSAATNTGNLQYGQSIHACVWKYGFETDVAVSNALVTMYMKNGCVHDGTKLYE 474
Query: 392 RVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACS 445
+ D+DL W+A ++G GM D+ L +FY M EG P+ + SIL +CS
Sbjct: 475 SMVDRDLISWNAYLSGLHDCGMYDRPLTIFYHMLE-EGFIPNMYTFISILGSCS 527
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 104/379 (27%), Positives = 187/379 (49%), Gaps = 6/379 (1%)
Query: 136 FVSVVSGCSFRQGISMHCCVYKL---GLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIG 192
+ S++ C+ ++ + + ++ L ++N + L S++++YAK AR + ++
Sbjct: 115 YSSMLRECASKRSLGVAKAIHGLIVKDVINPDSHLWVSLVNVYAKCRYSAYARLVLAKMP 174
Query: 193 ETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALS 252
+ +VSWT +I G V G N++ L +M+ + P+ + C+ L L
Sbjct: 175 DRDVVSWTALIQGLVAEGFANDSIYLFQEMQNEGIMPNEFTLATGLKACSLCMALDLGKQ 234
Query: 253 MHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGY 312
MH+ K G + + + LV +Y KCG++ELA ++F + E++ W ++ GYAQ G
Sbjct: 235 MHAQAFKLGLLLDLFVGSALVDLYAKCGEIELASKMFIGMPEQNDVTWNVLLNGYAQRGD 294
Query: 313 PSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTS 372
+ + LF +++ V+ NE TL T L CA +L +G+ I I+ G E N +
Sbjct: 295 VTGVLKLFCSMMELDVKCNEFTLTTVLKGCANSKNLKQGQVIHSLIIKCGYEGNEFIGCG 354
Query: 373 LIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKP 432
L+ M+SKCG A VF+ + D+ VWSA+I G ++++ LF+ M+ + L P
Sbjct: 355 LVDMYSKCGLAIDAIGVFKTIKKPDIVVWSALITCLDQQGQSEESIKLFHLMRLGDTL-P 413
Query: 433 DAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKT 492
+ S+LSA +++G + G S + +G E + LV + + G K
Sbjct: 414 NQYTICSLLSAATNTGNLQYGQSIHACVW-KYGFETDVAVSNALVTMYMKNGCVHDGTK- 471
Query: 493 IHEMPVEVQAQVWAPLLSA 511
++E V+ W LS
Sbjct: 472 LYESMVDRDLISWNAYLSG 490
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 122/228 (53%), Gaps = 1/228 (0%)
Query: 226 SVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELA 285
S L + +++ CA +L +A ++H L++K N + L LV++Y KC A
Sbjct: 107 SSKKKLKYYSSMLRECASKRSLGVAKAIHGLIVKDVINPDSHLWVSLVNVYAKCRYSAYA 166
Query: 286 RRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAEL 345
R V + ++ V WT++I G G+ ++++ LF+ + + PNE TLAT L AC+
Sbjct: 167 RLVLAKMPDRDVVSWTALIQGLVAEGFANDSIYLFQEMQNEGIMPNEFTLATGLKACSLC 226
Query: 346 GSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMI 405
+L GK++ GL + V ++L+ +++KCG I A ++F +P+++ W+ ++
Sbjct: 227 MALDLGKQMHAQAFKLGLLLDLFVGSALVDLYAKCGEIELASKMFIGMPEQNDVTWNVLL 286
Query: 406 NGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDG 453
NGYA G L LF M ++ +K + T++L C++S + G
Sbjct: 287 NGYAQRGDVTGVLKLFCSMMELD-VKCNEFTLTTVLKGCANSKNLKQG 333
>gi|302805550|ref|XP_002984526.1| hypothetical protein SELMODRAFT_181046 [Selaginella moellendorffii]
gi|300147914|gb|EFJ14576.1| hypothetical protein SELMODRAFT_181046 [Selaginella moellendorffii]
Length = 792
Score = 373 bits (957), Expect = e-100, Method: Compositional matrix adjust.
Identities = 196/583 (33%), Positives = 334/583 (57%), Gaps = 15/583 (2%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI + NNG +E L Y M G+ +S TF L AC + DGK +H+ ++
Sbjct: 218 MISSYANNGFCDEALDLYQQMDADGIQPDSITFTSALLAC---TKLVDGKAIHARIVSSN 274
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+ D FV + LI+MY++C D S+R+ ++ ++ + VV W S+++A+ + C EA+ +
Sbjct: 275 MESD-FVGSALINMYARCGDVSSARQAFEK--IQNKHVVCWTSLMTAYVQTCHYREALDL 331
Query: 121 LKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
M G+ T+V+ + C+ ++G ++H V++ G + + ++++MYA
Sbjct: 332 YGRMDHEGVHADGVTYVTALGACASLGALKEGKAIHSRVFECGF--QSLVVHTALLTMYA 389
Query: 177 KFGKVNEARSIFDEIGET-SIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFL 235
K G+++ AR++F+ + + ++ WT +I Y G+ EA L +QM P+ F
Sbjct: 390 KCGELDAARAVFNRVRQKRNVYCWTAMISAYAQAGHTQEALELYDQMVAEGTRPNEYTFS 449
Query: 236 NLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEK 295
N++ C+ G+L + +H + S + + N LV+MY KCG LELA+ F+A K
Sbjct: 450 NVLAACSSSGDLEAGMKIHGHVENSELASNVAVQNALVTMYAKCGSLELAKSAFEASGRK 509
Query: 296 SVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIE 355
+ W +MIG YAQ G EA++L++ + V P+E T+A++LSACA GSL G+EI
Sbjct: 510 DLVSWNAMIGAYAQHGLGREALDLYQTMTSQGVLPDEVTIASSLSACAISGSLQLGREIH 569
Query: 356 EYIVLN-GLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMG 414
++ N S+ VQT+L++M+ +CGR+ A+ +FE + +D+ W+AM + YA G
Sbjct: 570 SRVLKNQSFRSSLMVQTALVNMYGRCGRLETARSMFEDMGQRDVLSWTAMTSAYAQQGHA 629
Query: 415 DQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYL 474
DQ L+L+ +M + G++P+ + +TSIL CSH+G++ G+ F MQS + P EH+L
Sbjct: 630 DQVLDLYLEMV-LHGIRPNEITFTSILVGCSHAGLLARGVECFLEMQSEHEVVPIREHFL 688
Query: 475 CLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPG 534
C+VDLLGR+GR A + MP + + W +L +C H + + + AA+ + L+P
Sbjct: 689 CMVDLLGRSGRLRDAEALVESMPYQPDSVAWLTVLGSCKTHSDADTAKRAARRVKELDPE 748
Query: 535 STGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVE 577
+T Y L++++FT+AG+ +EA + M + L K PG S +E
Sbjct: 749 NTSLYSLLSSIFTAAGLPQEALEVQLSMKEMGLKKPPGQSLIE 791
Score = 278 bits (711), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 158/500 (31%), Positives = 271/500 (54%), Gaps = 10/500 (2%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
M+ NG + L Y M + G + T+ +VL +C+ + S+ + + +H+ +++
Sbjct: 115 MLSAYGKNGLWNRALELYHRMCEEGPEPDKITYFIVLGSCSAVGSLREAREIHASIIEAP 174
Query: 61 --FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAI 118
+ + +Q L++MY KC +RKV D ++ R VSW S+IS+++ DEA+
Sbjct: 175 QIIRDNLSLQNALVNMYGKCGSVEEARKVFD--GIKNRDAVSWTSMISSYANNGFCDEAL 232
Query: 119 LVLKEMWVLGLELSASTFVSVVSGCS-FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAK 177
+ ++M G++ + TF S + C+ G ++H + + ++ + +++++MYA+
Sbjct: 233 DLYQQMDADGIQPDSITFTSALLACTKLVDGKAIHARIVSSNMESDFV--GSALINMYAR 290
Query: 178 FGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNL 237
G V+ AR F++I +V WT+++ YV + EA L +M V D V ++
Sbjct: 291 CGDVSSARQAFEKIQNKHVVCWTSLMTAYVQTCHYREALDLYGRMDHEGVHADGVTYVTA 350
Query: 238 ILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEK-S 296
+ CA +G L ++HS + + G+ + + L++MY KCG+L+ AR VF+ V +K +
Sbjct: 351 LGACASLGALKEGKAIHSRVFECGFQSL-VVHTALLTMYAKCGELDAARAVFNRVRQKRN 409
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEE 356
V+ WT+MI YAQ G+ EA+ L+ +++ RPNE T + L+AC+ G L G +I
Sbjct: 410 VYCWTAMISAYAQAGHTQEALELYDQMVAEGTRPNEYTFSNVLAACSSSGDLEAGMKIHG 469
Query: 357 YIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQ 416
++ + L SN VQ +L+ M++KCG + AK FE KDL W+AMI YA HG+G +
Sbjct: 470 HVENSELASNVAVQNALVTMYAKCGSLELAKSAFEASGRKDLVSWNAMIGAYAQHGLGRE 529
Query: 417 ALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCL 476
AL+L+ M +G+ PD V S LSAC+ SG + G + N S+ L
Sbjct: 530 ALDLYQTMTS-QGVLPDEVTIASSLSACAISGSLQLGREIHSRVLKNQSFRSSLMVQTAL 588
Query: 477 VDLLGRAGRFDLALKTIHEM 496
V++ GR GR + A +M
Sbjct: 589 VNMYGRCGRLETARSMFEDM 608
Score = 245 bits (625), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 149/495 (30%), Positives = 259/495 (52%), Gaps = 15/495 (3%)
Query: 27 HGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRK 86
HG + +L+ C + S+ +GK VH H+L+ G ++ F+ LI MY C + +R
Sbjct: 39 HGYVELYDELLQQCGRLGSLAEGKLVHRHLLRTGHGRNQFLGNLLIQMYGNCGEIHLARA 98
Query: 87 VLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGC--- 143
+++V +N ++SA+ + L + A+ + M G E T+ V+ C
Sbjct: 99 AFQNF-ASIKAVACYNQMLSAYGKNGLWNRALELYHRMCEEGPEPDKITYFIVLGSCSAV 157
Query: 144 -SFRQGISMHCCVYKL-GLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTT 201
S R+ +H + + ++ + + L N++++MY K G V EAR +FD I VSWT+
Sbjct: 158 GSLREAREIHASIIEAPQIIRDNLSLQNALVNMYGKCGSVEEARKVFDGIKNRDAVSWTS 217
Query: 202 IIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSG 261
+I Y N G +EA L QM + PD + F + +L C + L ++H+ ++ S
Sbjct: 218 MISSYANNGFCDEALDLYQQMDADGIQPDSITFTSALLACTK---LVDGKAIHARIVSSN 274
Query: 262 YNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFK 321
+ D + + L++MY +CGD+ AR+ F+ + K V WTS++ Y Q + EA++L+
Sbjct: 275 MES-DFVGSALINMYARCGDVSSARQAFEKIQNKHVVCWTSLMTAYVQTCHYREALDLYG 333
Query: 322 RLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCG 381
R+ V + T T L ACA LG+L +GK I + G +S V T+L+ M++KCG
Sbjct: 334 RMDHEGVHADGVTYVTALGACASLGALKEGKAIHSRVFECGFQS-LVVHTALLTMYAKCG 392
Query: 382 RINKAKEVFERVPDK-DLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSI 440
++ A+ VF RV K ++ W+AMI+ YA G +AL L+ +M EG +P+ ++++
Sbjct: 393 ELDAARAVFNRVRQKRNVYCWTAMISAYAQAGHTQEALELYDQMV-AEGTRPNEYTFSNV 451
Query: 441 LSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEV 500
L+ACS SG ++ G+ ++ N + ++ LV + + G +LA K+ E
Sbjct: 452 LAACSSSGDLEAGMKIHGHVE-NSELASNVAVQNALVTMYAKCGSLELA-KSAFEASGRK 509
Query: 501 QAQVWAPLLSACMKH 515
W ++ A +H
Sbjct: 510 DLVSWNAMIGAYAQH 524
>gi|449458534|ref|XP_004147002.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Cucumis sativus]
Length = 989
Score = 373 bits (957), Expect = e-100, Method: Compositional matrix adjust.
Identities = 197/625 (31%), Positives = 345/625 (55%), Gaps = 8/625 (1%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
++ G L + SM++ V N FT VLK CAN ++ G+ +HS ++K G
Sbjct: 285 LLNGYAQRGDVTGVLKLFCSMMELDVKCNEFTLTTVLKGCANSKNLKQGQVIHSLIIKCG 344
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
++ + F+ GL+DMYSKC + + V ++ +V W+++I+ + ++E+I +
Sbjct: 345 YEGNEFIGCGLVDMYSKCGLAIDAIGVFK--TIKKPDIVVWSALITCLDQQGQSEESIKL 402
Query: 121 LKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
M + + T S++S + + G S+H CV+K G ++ ++N++++MY
Sbjct: 403 FHLMRLGDTLPNQYTICSLLSAATNTGNLQYGQSIHACVWKYGF-ETDVAVSNALVTMYM 461
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K G V++ +++ + + ++SW + G + G + + M P++ F++
Sbjct: 462 KNGCVHDGTKLYESMVDRDLISWNAYLSGLHDCGMYDRPLTIFYHMLEEGFIPNMYTFIS 521
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
++ C+ + ++ +H+ ++K+ ++ + + L+ MY KC LE A F+ + +
Sbjct: 522 ILGSCSCLFDVHYGRQVHAHIIKNQLDDNNFVCTALIDMYAKCMYLEDADVAFNRLSVRD 581
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEE 356
+F WT +I YAQ +A+N F+++ + V+PNE TLA LS C+ L SL G+++
Sbjct: 582 LFTWTVIITNYAQTNQGEKALNYFRQMQQEGVKPNEFTLAGCLSGCSSLASLEGGQQLHS 641
Query: 357 YIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQ 416
+ +G S+ V ++L+ M++KCG + +A+ +FE + +D W+ +I GYA +G G++
Sbjct: 642 MVFKSGHVSDMFVGSALVDMYAKCGCMEEAEALFEALIRRDTIAWNTIICGYAQNGQGNK 701
Query: 417 ALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCL 476
AL F +M EG+ PD V +T ILSACSH G+V++G F SM +FGI P+++H C+
Sbjct: 702 ALTAF-RMMLDEGISPDGVTFTGILSACSHQGLVEEGKEHFNSMYRDFGISPTVDHCACM 760
Query: 477 VDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGST 536
VD+LGR G+FD I +M + A +W +L A H+N+ LGE AA L L P
Sbjct: 761 VDILGRVGKFDELEDFIQKMQLSQNALIWETVLGASKMHNNLVLGEKAANKLFELQPEEE 820
Query: 537 GNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSV 596
+YIL++N+F + G W + R LM + + KEPG S VE +G V FV+ D SH
Sbjct: 821 SSYILLSNIFATEGRWDDVKRVRSLMSSKGVKKEPGCSWVEANGQVHTFVSHDYSHPQIQ 880
Query: 597 DIRKTLKELHIKLLEAGYIAEADIV 621
+I L EL +L Y+ + + V
Sbjct: 881 EIHLKLDELDRELASIQYVPKTEYV 905
Score = 206 bits (523), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 123/457 (26%), Positives = 227/457 (49%), Gaps = 8/457 (1%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+I+ G +++ + M G+ N FT LKAC+ ++ GK++H+ K+G
Sbjct: 184 LIQGLVAEGFANDSIYLFQEMQNEGIMPNEFTLATGLKACSLCMALDLGKQMHAQAFKLG 243
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
D FV + L+D+Y+KC + + K+ MP ++ V+WN +++ +++ + +
Sbjct: 244 LLLDLFVGSALVDLYAKCGEIELASKMFIGMPE--QNDVTWNVLLNGYAQRGDVTGVLKL 301
Query: 121 LKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
M L ++ + T +V+ GC+ +QG +H + K G NE + ++ MY+
Sbjct: 302 FCSMMELDVKCNEFTLTTVLKGCANSKNLKQGQVIHSLIIKCGYEGNEF-IGCGLVDMYS 360
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K G +A +F I + IV W+ +I G E+ L + MR P+ +
Sbjct: 361 KCGLAIDAIGVFKTIKKPDIVVWSALITCLDQQGQSEESIKLFHLMRLGDTLPNQYTICS 420
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
L+ GNL S+H+ + K G+ + + N LV+MY K G + +++++++++
Sbjct: 421 LLSAATNTGNLQYGQSIHACVWKYGFETDVAVSNALVTMYMKNGCVHDGTKLYESMVDRD 480
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEE 356
+ W + + G G + +F +L+ PN T + L +C+ L + G+++
Sbjct: 481 LISWNAYLSGLHDCGMYDRPLTIFYHMLEEGFIPNMYTFISILGSCSCLFDVHYGRQVHA 540
Query: 357 YIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQ 416
+I+ N L+ N V T+LI M++KC + A F R+ +DL W+ +I YA G++
Sbjct: 541 HIIKNQLDDNNFVCTALIDMYAKCMYLEDADVAFNRLSVRDLFTWTVIITNYAQTNQGEK 600
Query: 417 ALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDG 453
ALN F +MQ EG+KP+ LS CS ++ G
Sbjct: 601 ALNYFRQMQQ-EGVKPNEFTLAGCLSGCSSLASLEGG 636
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 121/414 (29%), Positives = 211/414 (50%), Gaps = 8/414 (1%)
Query: 36 VLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRL 95
+L+ CA+ S+ K +H ++K D+ + L+++Y+KC +R VL +MP R
Sbjct: 118 MLRECASKRSLGVAKAIHGLIVKDVINPDSHLWVSLVNVYAKCRYSAYARLVLAKMPDR- 176
Query: 96 RSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCSFRQ----GISM 151
VVSW ++I +++I + +EM G+ + T + + CS G M
Sbjct: 177 -DVVSWTALIQGLVAEGFANDSIYLFQEMQNEGIMPNEFTLATGLKACSLCMALDLGKQM 235
Query: 152 HCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGN 211
H +KLGLL ++ + ++++ +YAK G++ A +F + E + V+W ++ GY G+
Sbjct: 236 HAQAFKLGLLL-DLFVGSALVDLYAKCGEIELASKMFIGMPEQNDVTWNVLLNGYAQRGD 294
Query: 212 VNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNL 271
V L M + V + ++ GCA NL +HSL++K GY + +
Sbjct: 295 VTGVLKLFCSMMELDVKCNEFTLTTVLKGCANSKNLKQGQVIHSLIIKCGYEGNEFIGCG 354
Query: 272 LVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPN 331
LV MY+KCG A VF + + + +W+++I Q G E++ LF + PN
Sbjct: 355 LVDMYSKCGLAIDAIGVFKTIKKPDIVVWSALITCLDQQGQSEESIKLFHLMRLGDTLPN 414
Query: 332 EATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFE 391
+ T+ + LSA G+L G+ I + G E++ V +L+ M+ K G ++ +++E
Sbjct: 415 QYTICSLLSAATNTGNLQYGQSIHACVWKYGFETDVAVSNALVTMYMKNGCVHDGTKLYE 474
Query: 392 RVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACS 445
+ D+DL W+A ++G GM D+ L +FY M EG P+ + SIL +CS
Sbjct: 475 SMVDRDLISWNAYLSGLHDCGMYDRPLTIFYHMLE-EGFIPNMYTFISILGSCS 527
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 104/379 (27%), Positives = 187/379 (49%), Gaps = 6/379 (1%)
Query: 136 FVSVVSGCSFRQGISMHCCVYKL---GLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIG 192
+ S++ C+ ++ + + ++ L ++N + L S++++YAK AR + ++
Sbjct: 115 YSSMLRECASKRSLGVAKAIHGLIVKDVINPDSHLWVSLVNVYAKCRYSAYARLVLAKMP 174
Query: 193 ETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALS 252
+ +VSWT +I G V G N++ L +M+ + P+ + C+ L L
Sbjct: 175 DRDVVSWTALIQGLVAEGFANDSIYLFQEMQNEGIMPNEFTLATGLKACSLCMALDLGKQ 234
Query: 253 MHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGY 312
MH+ K G + + + LV +Y KCG++ELA ++F + E++ W ++ GYAQ G
Sbjct: 235 MHAQAFKLGLLLDLFVGSALVDLYAKCGEIELASKMFIGMPEQNDVTWNVLLNGYAQRGD 294
Query: 313 PSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTS 372
+ + LF +++ V+ NE TL T L CA +L +G+ I I+ G E N +
Sbjct: 295 VTGVLKLFCSMMELDVKCNEFTLTTVLKGCANSKNLKQGQVIHSLIIKCGYEGNEFIGCG 354
Query: 373 LIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKP 432
L+ M+SKCG A VF+ + D+ VWSA+I G ++++ LF+ M+ + L P
Sbjct: 355 LVDMYSKCGLAIDAIGVFKTIKKPDIVVWSALITCLDQQGQSEESIKLFHLMRLGDTL-P 413
Query: 433 DAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKT 492
+ S+LSA +++G + G S + +G E + LV + + G K
Sbjct: 414 NQYTICSLLSAATNTGNLQYGQSIHACVWK-YGFETDVAVSNALVTMYMKNGCVHDGTK- 471
Query: 493 IHEMPVEVQAQVWAPLLSA 511
++E V+ W LS
Sbjct: 472 LYESMVDRDLISWNAYLSG 490
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 122/228 (53%), Gaps = 1/228 (0%)
Query: 226 SVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELA 285
S L + +++ CA +L +A ++H L++K N + L LV++Y KC A
Sbjct: 107 SSKKKLKYYSSMLRECASKRSLGVAKAIHGLIVKDVINPDSHLWVSLVNVYAKCRYSAYA 166
Query: 286 RRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAEL 345
R V + ++ V WT++I G G+ ++++ LF+ + + PNE TLAT L AC+
Sbjct: 167 RLVLAKMPDRDVVSWTALIQGLVAEGFANDSIYLFQEMQNEGIMPNEFTLATGLKACSLC 226
Query: 346 GSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMI 405
+L GK++ GL + V ++L+ +++KCG I A ++F +P+++ W+ ++
Sbjct: 227 MALDLGKQMHAQAFKLGLLLDLFVGSALVDLYAKCGEIELASKMFIGMPEQNDVTWNVLL 286
Query: 406 NGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDG 453
NGYA G L LF M ++ +K + T++L C++S + G
Sbjct: 287 NGYAQRGDVTGVLKLFCSMMELD-VKCNEFTLTTVLKGCANSKNLKQG 333
>gi|222631044|gb|EEE63176.1| hypothetical protein OsJ_17985 [Oryza sativa Japonica Group]
Length = 745
Score = 373 bits (957), Expect = e-100, Method: Compositional matrix adjust.
Identities = 219/661 (33%), Positives = 342/661 (51%), Gaps = 62/661 (9%)
Query: 21 MLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSD 80
ML+ G + FT P VLKAC + S G H + GF+ + F+ L+ MYS+C
Sbjct: 1 MLRAGTRLDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGS 60
Query: 81 FVSSRKVLDEMPVR-LRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSAS----- 134
+ + DE+ R + V+SWNSI+SAH ++ A+ + +M ++ E +
Sbjct: 61 LEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDI 120
Query: 135 -TFVSVVSGCSFRQGISMHCCVYKLGLLNN---EIPLANSVMSMYAKFGKVNEARSIFDE 190
+ V+++ C + + V+ + N ++ + N+++ YAK G + A +F+
Sbjct: 121 ISIVNILPACGSLKAVPQTKEVHGNAIRNGTFLDVFVGNALIDAYAKCGLMENAVKVFNM 180
Query: 191 IGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILG---------- 240
+ +VSW ++ GY GN AF L MR+ ++ D+V + +I G
Sbjct: 181 MEFKDVVSWNAMVAGYSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQRGCSHEA 240
Query: 241 -------------------------CAQVGNLFLALSMHSLLLKS---------GYNNED 266
CA +G + +H+ LK+ G +ED
Sbjct: 241 LNVFRQMIFSGSLPNCVTIISVLSACASLGAFSQGMEIHAYSLKNCLLTLDNDFGGEDED 300
Query: 267 PL-DNLLVSMYTKCGDLELARRVFDAVL--EKSVFLWTSMIGGYAQLGYPSEAVNLFKRL 323
+ N L+ MY+KC + AR +FD + E++V WT MIGG+AQ G ++A+ LF +
Sbjct: 301 LMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEM 360
Query: 324 LKT--SVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGL--ESNRQVQTSLIHMFSK 379
+ V PN T++ L ACA L ++ GK+I Y++ + S V LI+M+SK
Sbjct: 361 ISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHQYDSSAYFVANCLINMYSK 420
Query: 380 CGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTS 439
CG ++ A+ VF+ + K W++M+ GY +HG G +AL++F KM+ G PD + +
Sbjct: 421 CGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKA-GFVPDDITFLV 479
Query: 440 ILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVE 499
+L ACSH GMVD GLS+F SM +++G+ P EHY +DLL R GR D A KT+ +MP+E
Sbjct: 480 VLYACSHCGMVDQGLSYFDSMSADYGLTPRAEHYAYAIDLLARFGRLDKAWKTVKDMPME 539
Query: 500 VQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATAR 559
A VW LLSAC H NVEL E+A L+ +N + G+Y L++N++ +AG WK+ A R
Sbjct: 540 PTAVVWVALLSACRVHSNVELAEHALNKLVEMNAENDGSYTLISNIYATAGRWKDVARIR 599
Query: 560 GLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKELHIKLLEAGYIAEAD 619
LM + K PG S V+ F GDRSH LS I L+ L ++ GY+ E +
Sbjct: 600 HLMKKSGIKKRPGCSWVQGQKGTASFFVGDRSHPLSPQIYALLESLIDRIKAMGYVPETN 659
Query: 620 I 620
Sbjct: 660 F 660
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 88/323 (27%), Positives = 161/323 (49%), Gaps = 19/323 (5%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKV- 59
+I + G E L+ + M+ +G N T VL ACA++ + G +H++ LK
Sbjct: 227 VIAGYSQRGCSHEALNVFRQMIFSGSLPNCVTIISVLSACASLGAFSQGMEIHAYSLKNC 286
Query: 60 ---------GFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSR 110
G +D V LIDMYSKC F ++R + D++P+ R+VV+W +I H++
Sbjct: 287 LLTLDNDFGGEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQ 346
Query: 111 ACLNDEAILVLKEMW--VLGLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNE 164
+++A+ + EM G+ +A T ++ C + R G +H V + ++
Sbjct: 347 YGDSNDALKLFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHQYDSS 406
Query: 165 IP-LANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMR 223
+AN +++MY+K G V+ AR +FD + + S +SWT+++ GY G +EA + ++MR
Sbjct: 407 AYFVANCLINMYSKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMR 466
Query: 224 RMSVTPDLVVFLNLILGCAQVGNLFLALS-MHSLLLKSGYNNEDPLDNLLVSMYTKCGDL 282
+ PD + FL ++ C+ G + LS S+ G + + + G L
Sbjct: 467 KAGFVPDDITFLVVLYACSHCGMVDQGLSYFDSMSADYGLTPRAEHYAYAIDLLARFGRL 526
Query: 283 ELA-RRVFDAVLEKSVFLWTSMI 304
+ A + V D +E + +W +++
Sbjct: 527 DKAWKTVKDMPMEPTAVVWVALL 549
>gi|225459793|ref|XP_002284799.1| PREDICTED: pentatricopeptide repeat-containing protein At2g33680
[Vitis vinifera]
gi|302141693|emb|CBI18896.3| unnamed protein product [Vitis vinifera]
Length = 703
Score = 372 bits (956), Expect = e-100, Method: Compositional matrix adjust.
Identities = 201/595 (33%), Positives = 333/595 (55%), Gaps = 8/595 (1%)
Query: 29 NSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVL 88
N+ TF V A + + G+ H+ +K+ +D FV + L++MY K +RKV
Sbjct: 107 NAHTFAGVFTAASTLVDAAGGRLAHAVAIKMDSCRDVFVGSSLMNMYCKAGLTPEARKVF 166
Query: 89 DEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCSFRQ- 147
D MP R + VSW ++IS ++ L EA+ + + M + F SV+S + +
Sbjct: 167 DTMPER--NSVSWATMISGYASQKLAAEALGLFRLMRREEEGENEFVFTSVLSALTLPEL 224
Query: 148 ---GISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIG 204
G +HC K GLL+ + + N++++MYAK G +++A F+ + + ++W+ +I
Sbjct: 225 VNNGKQIHCIAVKNGLLSI-VSVGNALVTMYAKCGSLDDALQTFETSSDKNSITWSAMIT 283
Query: 205 GYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNN 264
GY G+ ++A L + M + P F+ +I C+ +G + +H LLK G+ +
Sbjct: 284 GYAQSGDSDKALKLFSSMHLSGIRPSEFTFVGVINACSDLGAAWEGKQVHDYLLKLGFES 343
Query: 265 EDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLL 324
+ + LV MY KC + AR+ FD + E + LWTSMIGGY Q G +A++L+ R+
Sbjct: 344 QIYVMTALVDMYAKCSSIVDARKGFDYLQEPDIVLWTSMIGGYVQNGENEDALSLYGRME 403
Query: 325 KTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRIN 384
+ PNE T+A+ L AC+ L +L +GK+I V G + ++L M++KCG +
Sbjct: 404 MEGILPNELTMASVLKACSSLAALEQGKQIHARTVKYGFGLEVPIGSALSTMYAKCGCLK 463
Query: 385 KAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSAC 444
VF R+P +D+ W+AMI+G + +G G +AL LF +MQ +EG KPD V + +ILSAC
Sbjct: 464 DGTLVFRRMPARDVISWNAMISGLSQNGCGKEALELFEEMQ-LEGTKPDYVTFVNILSAC 522
Query: 445 SHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQV 504
SH G+V+ G +F+ M FG++P +EHY C+VD+L RAG+ A++ ++ +
Sbjct: 523 SHMGLVERGWGYFRMMFDEFGMDPRVEHYACMVDILSRAGKLKEAIEFTESATIDHGMCL 582
Query: 505 WAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDD 564
W +L AC + N ELG YA + L+ L + Y+L+++++++ G W++ R +M
Sbjct: 583 WRIILGACRNYRNYELGAYAGEKLMELGSQESSAYVLLSSIYSALGRWEDVERVRRMMKL 642
Query: 565 RRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKELHIKLLEAGYIAEAD 619
R ++KEPG S +E+ V VFV D+ H DI L++L ++ + GY D
Sbjct: 643 RGVSKEPGCSWIELKSGVHVFVVKDQMHPQIGDIHVELRQLSKQMKDEGYEPATD 697
Score = 210 bits (534), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 132/449 (29%), Positives = 239/449 (53%), Gaps = 13/449 (2%)
Query: 29 NSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVL 88
N F +L+ N S+ GK +H+ ++K ++ L+++Y+KC ++ V
Sbjct: 6 NRSFFTALLQYTHN-RSLQKGKALHAQIIKSS-SSCVYIANSLVNLYAKCQRLREAKFVF 63
Query: 89 DEMPVRLRSVVSWNSIISAHSR--ACLNDEAILVLKEMWVLGLELSASTFVSVVSGCSF- 145
+ ++ + VVSWN II+ +S+ + + + + M +A TF V + S
Sbjct: 64 ER--IQNKDVVSWNCIINGYSQHGPSGSSHVMELFQRMRAENTAPNAHTFAGVFTAASTL 121
Query: 146 ---RQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTI 202
G H K+ + + + +S+M+MY K G EAR +FD + E + VSW T+
Sbjct: 122 VDAAGGRLAHAVAIKMDSCRD-VFVGSSLMNMYCKAGLTPEARKVFDTMPERNSVSWATM 180
Query: 203 IGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGY 262
I GY + EA GL MRR + VF +++ + +H + +K+G
Sbjct: 181 ISGYASQKLAAEALGLFRLMRREEEGENEFVFTSVLSALTLPELVNNGKQIHCIAVKNGL 240
Query: 263 NNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKR 322
+ + N LV+MY KCG L+ A + F+ +K+ W++MI GYAQ G +A+ LF
Sbjct: 241 LSIVSVGNALVTMYAKCGSLDDALQTFETSSDKNSITWSAMITGYAQSGDSDKALKLFSS 300
Query: 323 LLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGR 382
+ + +RP+E T ++AC++LG+ +GK++ +Y++ G ES V T+L+ M++KC
Sbjct: 301 MHLSGIRPSEFTFVGVINACSDLGAAWEGKQVHDYLLKLGFESQIYVMTALVDMYAKCSS 360
Query: 383 INKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILS 442
I A++ F+ + + D+ +W++MI GY +G + AL+L+ +M+ +EG+ P+ + S+L
Sbjct: 361 IVDARKGFDYLQEPDIVLWTSMIGGYVQNGENEDALSLYGRME-MEGILPNELTMASVLK 419
Query: 443 ACSHSGMVDDGLSFF-KSMQSNFGIEPSI 470
ACS ++ G ++++ FG+E I
Sbjct: 420 ACSSLAALEQGKQIHARTVKYGFGLEVPI 448
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 106/403 (26%), Positives = 199/403 (49%), Gaps = 17/403 (4%)
Query: 13 ETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLI 72
E L + M + N F F VL A + +GK++H +K G V L+
Sbjct: 192 EALGLFRLMRREEEGENEFVFTSVLSALTLPELVNNGKQIHCIAVKNGLLSIVSVGNALV 251
Query: 73 DMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELS 132
MY+KC + + + ++ ++W+++I+ ++++ +D+A+ + M + G+ S
Sbjct: 252 TMYAKCGSLDDALQTFETSSD--KNSITWSAMITGYAQSGDSDKALKLFSSMHLSGIRPS 309
Query: 133 ASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIF 188
TFV V++ CS +G +H + KLG ++I + +++ MYAK + +AR F
Sbjct: 310 EFTFVGVINACSDLGAAWEGKQVHDYLLKLG-FESQIYVMTALVDMYAKCSSIVDARKGF 368
Query: 189 DEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLF 248
D + E IV WT++IGGYV G +A L +M + P+ + +++ C+ + L
Sbjct: 369 DYLQEPDIVLWTSMIGGYVQNGENEDALSLYGRMEMEGILPNELTMASVLKACSSLAALE 428
Query: 249 LALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYA 308
+H+ +K G+ E P+ + L +MY KCG L+ VF + + V W +MI G +
Sbjct: 429 QGKQIHARTVKYGFGLEVPIGSALSTMYAKCGCLKDGTLVFRRMPARDVISWNAMISGLS 488
Query: 309 QLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKG-----KEIEEYIVLNGL 363
Q G EA+ LF+ + +P+ T LSAC+ +G + +G +E+ G+
Sbjct: 489 QNGCGKEALELFEEMQLEGTKPDYVTFVNILSACSHMGLVERGWGYFRMMFDEF----GM 544
Query: 364 ESNRQVQTSLIHMFSKCGRINKAKEVFERVP-DKDLAVWSAMI 405
+ + ++ + S+ G++ +A E E D + +W ++
Sbjct: 545 DPRVEHYACMVDILSRAGKLKEAIEFTESATIDHGMCLWRIIL 587
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 103/341 (30%), Positives = 172/341 (50%), Gaps = 6/341 (1%)
Query: 144 SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTII 203
S ++G ++H + K ++ + +ANS++++YAK ++ EA+ +F+ I +VSW II
Sbjct: 21 SLQKGKALHAQIIKSS--SSCVYIANSLVNLYAKCQRLREAKFVFERIQNKDVVSWNCII 78
Query: 204 GGYVNVG--NVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSG 261
GY G + L +MR + P+ F + + + + H++ +K
Sbjct: 79 NGYSQHGPSGSSHVMELFQRMRAENTAPNAHTFAGVFTAASTLVDAAGGRLAHAVAIKMD 138
Query: 262 YNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFK 321
+ + + L++MY K G AR+VFD + E++ W +MI GYA +EA+ LF+
Sbjct: 139 SCRDVFVGSSLMNMYCKAGLTPEARKVFDTMPERNSVSWATMISGYASQKLAAEALGLFR 198
Query: 322 RLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCG 381
+ + NE + LSA ++ GK+I V NGL S V +L+ M++KCG
Sbjct: 199 LMRREEEGENEFVFTSVLSALTLPELVNNGKQIHCIAVKNGLLSIVSVGNALVTMYAKCG 258
Query: 382 RINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSIL 441
++ A + FE DK+ WSAMI GYA G D+AL LF M H+ G++P + ++
Sbjct: 259 SLDDALQTFETSSDKNSITWSAMITGYAQSGDSDKALKLFSSM-HLSGIRPSEFTFVGVI 317
Query: 442 SACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGR 482
+ACS G +G + G E I LVD+ +
Sbjct: 318 NACSDLGAAWEGKQVHDYLL-KLGFESQIYVMTALVDMYAK 357
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 78/249 (31%), Positives = 135/249 (54%), Gaps = 7/249 (2%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI +G ++ L +SSM +G+ + FTF V+ AC+++ + W+GK+VH ++LK+G
Sbjct: 281 MITGYAQSGDSDKALKLFSSMHLSGIRPSEFTFVGVINACSDLGAAWEGKQVHDYLLKLG 340
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F+ +V T L+DMY+KCS V +RK D + + +V W S+I + + N++A+ +
Sbjct: 341 FESQIYVMTALVDMYAKCSSIVDARKGFDYL--QEPDIVLWTSMIGGYVQNGENEDALSL 398
Query: 121 LKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
M + G+ + T SV+ CS QG +H K G E+P+ +++ +MYA
Sbjct: 399 YGRMEMEGILPNELTMASVLKACSSLAALEQGKQIHARTVKYG-FGLEVPIGSALSTMYA 457
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K G + + +F + ++SW +I G G EA L +M+ PD V F+N
Sbjct: 458 KCGCLKDGTLVFRRMPARDVISWNAMISGLSQNGCGKEALELFEEMQLEGTKPDYVTFVN 517
Query: 237 LILGCAQVG 245
++ C+ +G
Sbjct: 518 ILSACSHMG 526
>gi|297814636|ref|XP_002875201.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297814638|ref|XP_002875202.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297321039|gb|EFH51460.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297321040|gb|EFH51461.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 708
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 213/577 (36%), Positives = 324/577 (56%), Gaps = 13/577 (2%)
Query: 7 NNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAF 66
NN SFE + Y +++ G + F LKAC + + +GK++H ++KV D
Sbjct: 132 NNESFE-VIKFYDLLMKHGFGYDDIVFSKALKACTEVQDLDNGKKIHCQIVKVP-SFDNV 189
Query: 67 VQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV---LKE 123
V TGL+DMY+KC + SS KV ++ + LR+VV W S+I+ + + L +E +++ ++E
Sbjct: 190 VLTGLLDMYAKCGEIKSSYKVFED--ITLRNVVCWTSMIAGYVKNDLYEEGLVLFNRMRE 247
Query: 124 MWVLGLELSASTFVSVVSGC-SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVN 182
VLG E + T V + + QG H C+ K G+ + L S++ MY K G ++
Sbjct: 248 NSVLGNEYTYGTLVMACTKLRALHQGKWFHGCLIKSGIELSSC-LVTSLLDMYVKCGDIS 306
Query: 183 EARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCA 242
AR +F+E +V WT +I GY + G+VNEA L +M + + P+ V +++ GC
Sbjct: 307 NARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMSGVGIKPNCVTIASVLSGCG 366
Query: 243 QVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTS 302
VGNL L S+H L +K G + + + N LV MY KC A+ VF+ EK + W S
Sbjct: 367 LVGNLELGRSIHGLSIKVGIWDTN-VANALVHMYAKCYQNRDAKYVFEMESEKDIVAWNS 425
Query: 303 MIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNG 362
+I G++Q G EA+ LF R+ SV PN T+A+ SACA LGSL+ G + Y V G
Sbjct: 426 IISGFSQNGSIHEALFLFHRMNTESVMPNGVTVASLFSACASLGSLAIGSSLHAYSVKLG 485
Query: 363 L--ESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNL 420
S+ V T+L+ ++KCG A+ +F+ + +K+ WSAMI GY G +L L
Sbjct: 486 FLASSSVHVGTALLDFYAKCGDAESARLIFDTIEEKNTITWSAMIGGYGKQGDTKGSLEL 545
Query: 421 FYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLL 480
F +M + KP+ +TS+LSACSH+GMV++G +F SM ++ PS +HY C+VD+L
Sbjct: 546 FEEMLKKQQ-KPNESTFTSVLSACSHTGMVNEGKKYFSSMYKDYNFTPSTKHYTCMVDML 604
Query: 481 GRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYI 540
RAG + AL I +MP++ + + L C H +LGE K +L L+P Y+
Sbjct: 605 ARAGELEQALDIIEKMPIQPDVRCFGAFLHGCGMHSRFDLGEIVIKKMLDLHPDDASYYV 664
Query: 541 LMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVE 577
L++NL+ S G W +A R LM R L+K G S +E
Sbjct: 665 LVSNLYASDGRWSQAKEVRNLMKQRGLSKIAGHSIME 701
Score = 223 bits (567), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 136/451 (30%), Positives = 244/451 (54%), Gaps = 17/451 (3%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI N +EE L ++ M + V GN +T+ ++ AC + ++ GK H ++K G
Sbjct: 225 MIAGYVKNDLYEEGLVLFNRMRENSVLGNEYTYGTLVMACTKLRALHQGKWFHGCLIKSG 284
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+ + + T L+DMY KC D ++R+V +E +V W ++I ++ +EA+ +
Sbjct: 285 IELSSCLVTSLLDMYVKCGDISNARRVFNEHS--HVDLVMWTAMIVGYTHNGSVNEALSL 342
Query: 121 LKEMWVLGLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
++M +G++ + T SV+SGC + G S+H K+G+ + + AN+++ MYA
Sbjct: 343 FQKMSGVGIKPNCVTIASVLSGCGLVGNLELGRSIHGLSIKVGIWDTNV--ANALVHMYA 400
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K + +A+ +F+ E IV+W +II G+ G+++EA L ++M SV P+ V +
Sbjct: 401 KCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNTESVMPNGVTVAS 460
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGY--NNEDPLDNLLVSMYTKCGDLELARRVFDAVLE 294
L CA +G+L + S+H+ +K G+ ++ + L+ Y KCGD E AR +FD + E
Sbjct: 461 LFSACASLGSLAIGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDAESARLIFDTIEE 520
Query: 295 KSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEI 354
K+ W++MIGGY + G ++ LF+ +LK +PNE+T + LSAC+ G +++GK+
Sbjct: 521 KNTITWSAMIGGYGKQGDTKGSLELFEEMLKKQQKPNESTFTSVLSACSHTGMVNEGKKY 580
Query: 355 --EEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVP-DKDLAVWSAMINGYAIH 411
Y N S + T ++ M ++ G + +A ++ E++P D+ + A ++G +H
Sbjct: 581 FSSMYKDYNFTPSTKHY-TCMVDMLARAGELEQALDIIEKMPIQPDVRCFGAFLHGCGMH 639
Query: 412 GMGDQALNLFYKMQHVEGLKPDAVVYTSILS 442
D + KM L PD Y ++S
Sbjct: 640 SRFDLGEIVIKKMLD---LHPDDASYYVLVS 667
Score = 165 bits (418), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 120/384 (31%), Positives = 190/384 (49%), Gaps = 11/384 (2%)
Query: 72 IDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLEL 131
+D+ S+CS V+D + +R + I + NDE+ L L L
Sbjct: 4 VDVESECSKLEIDVVVMDYLSAVMRMRCFTFTTIQELNLPEDNDESSLNYAASRPCFLLL 63
Query: 132 SASTFVSVVSGCSFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEI 191
S T + S RQ H + GL+ +I +A ++S+Y FG +AR +FD+I
Sbjct: 64 SKCTNID-----SLRQA---HGVLTGNGLMG-DISIATKLVSLYGSFGYTKDARLVFDQI 114
Query: 192 GETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLAL 251
E W I+ Y E + + + D +VF + C +V +L
Sbjct: 115 PEPDFYLWKVILRCYCLNNESFEVIKFYDLLMKHGFGYDDIVFSKALKACTEVQDLDNGK 174
Query: 252 SMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLG 311
+H ++K + L LL MY KCG+++ + +VF+ + ++V WTSMI GY +
Sbjct: 175 KIHCQIVKVPSFDNVVLTGLL-DMYAKCGEIKSSYKVFEDITLRNVVCWTSMIAGYVKND 233
Query: 312 YPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQT 371
E + LF R+ + SV NE T T + AC +L +L +GK ++ +G+E + + T
Sbjct: 234 LYEEGLVLFNRMRENSVLGNEYTYGTLVMACTKLRALHQGKWFHGCLIKSGIELSSCLVT 293
Query: 372 SLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLK 431
SL+ M+ KCG I+ A+ VF DL +W+AMI GY +G ++AL+LF KM V G+K
Sbjct: 294 SLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMSGV-GIK 352
Query: 432 PDAVVYTSILSACSHSGMVDDGLS 455
P+ V S+LS C G ++ G S
Sbjct: 353 PNCVTIASVLSGCGLVGNLELGRS 376
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 125/273 (45%), Gaps = 7/273 (2%)
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
L+ C + +L A H +L +G + + LVS+Y G + AR VFD + E
Sbjct: 62 LLSKCTNIDSLRQA---HGVLTGNGLMGDISIATKLVSLYGSFGYTKDARLVFDQIPEPD 118
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEE 356
+LW ++ Y E + + L+K ++ + L AC E+ L GK+I
Sbjct: 119 FYLWKVILRCYCLNNESFEVIKFYDLLMKHGFGYDDIVFSKALKACTEVQDLDNGKKIHC 178
Query: 357 YIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQ 416
IV + V T L+ M++KCG I + +VFE + +++ W++MI GY + + ++
Sbjct: 179 QIV-KVPSFDNVVLTGLLDMYAKCGEIKSSYKVFEDITLRNVVCWTSMIAGYVKNDLYEE 237
Query: 417 ALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCL 476
L LF +M+ + + Y +++ AC+ + G +F GIE S L
Sbjct: 238 GLVLFNRMRE-NSVLGNEYTYGTLVMACTKLRALHQG-KWFHGCLIKSGIELSSCLVTSL 295
Query: 477 VDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLL 509
+D+ + G A + +E V +W ++
Sbjct: 296 LDMYVKCGDISNARRVFNEHS-HVDLVMWTAMI 327
>gi|168045266|ref|XP_001775099.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673550|gb|EDQ60071.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 804
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 198/625 (31%), Positives = 342/625 (54%), Gaps = 8/625 (1%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI + G +E + ++ M Q + + FTF +L AC++ + G+ +H V++ G
Sbjct: 100 MISGYAHRGLAQEAFNLFTLMQQERLEPDKFTFVSILSACSSPAVLNWGREIHVRVMEAG 159
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
D V LI MY+KC +R+V D M R VSW ++ A++ + +E++
Sbjct: 160 LANDTTVGNALISMYAKCGSVRDARRVFDAMASR--DEVSWTTLTGAYAESGYGEESLKT 217
Query: 121 LKEMWVLGLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
M + S T+++V+S C + +G +H + + ++++ ++ ++ MY
Sbjct: 218 YHAMLQERVRPSRITYMNVLSACGSLAALEKGKQIHAHIVE-SEYHSDVRVSTALTKMYM 276
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K G +AR +F+ + +++W T+I G+V+ G + EA G ++M V PD +
Sbjct: 277 KCGAFKDAREVFECLSYRDVIAWNTMIRGFVDSGQLEEAHGTFHRMLEEGVAPDRATYTT 336
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
++ CA+ G L +H+ K G ++ N L++MY+K G ++ AR+VFD + ++
Sbjct: 337 VLSACARPGGLARGKEIHARAAKDGLVSDVRFGNALINMYSKAGSMKDARQVFDRMPKRD 396
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEE 356
V WT+++G YA E+ FK++L+ V+ N+ T L AC+ +L GKEI
Sbjct: 397 VVSWTTLLGRYADCDQVVESFTTFKQMLQQGVKANKITYMCVLKACSNPVALKWGKEIHA 456
Query: 357 YIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQ 416
+V GL ++ V +L+ M+ KCG + A VFE + +D+ W+ +I G +G G +
Sbjct: 457 EVVKAGLLADLAVTNALMSMYFKCGSVEDAIRVFEGMSMRDVVTWNTLIGGLGQNGRGLE 516
Query: 417 ALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCL 476
AL Y++ EG++P+A + ++LSAC +V++G F M ++GI P+ +HY C+
Sbjct: 517 ALQR-YEVMKSEGMRPNAATFVNVLSACRVCNLVEEGRRQFAFMSKDYGIVPTEKHYACM 575
Query: 477 VDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGST 536
VD+L RAG A I +P++ A +W LL+AC H NVE+GE AA++ L L P +
Sbjct: 576 VDILARAGHLREAEDVILTIPLKPSAAMWGALLAACRIHCNVEIGERAAEHCLKLEPQNA 635
Query: 537 GNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSV 596
G Y+ ++ ++ +AGMW++ A R M +R + KEPG S +EI G V FVA D+SH +
Sbjct: 636 GLYVSLSAIYAAAGMWRDVAKLRKFMKERGVKKEPGRSWIEIAGEVHSFVARDQSHPRTQ 695
Query: 597 DIRKTLKELHIKLLEAGYIAEADIV 621
+I L+ L ++ GY+ + V
Sbjct: 696 EIYAELETLKKQMKSLGYVPDTRFV 720
Score = 254 bits (649), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 168/581 (28%), Positives = 281/581 (48%), Gaps = 61/581 (10%)
Query: 23 QTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFV 82
+ G +S+ + +L++C + GK+VH H+L+ G + + ++ L+ +Y+ C
Sbjct: 21 RKGPQVDSYDYVKLLQSCVKAKDLAVGKQVHEHILRCGVKPNVYITNTLLKLYAHCGSVN 80
Query: 83 SSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSG 142
+R++ D+ + SVVSWN +IS ++ L EA + M LE TFVS++S
Sbjct: 81 EARQLFDKFSNK--SVVSWNVMISGYAHRGLAQEAFNLFTLMQQERLEPDKFTFVSILSA 138
Query: 143 CS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVS 198
CS G +H V + GL N+ + N+++SMYAK G V +AR +FD + VS
Sbjct: 139 CSSPAVLNWGREIHVRVMEAGLAND-TTVGNALISMYAKCGSVRDARRVFDAMASRDEVS 197
Query: 199 WTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLL 258
WTT+ G Y G E+ + M + V P + ++N++ C + L +H+ ++
Sbjct: 198 WTTLTGAYAESGYGEESLKTYHAMLQERVRPSRITYMNVLSACGSLAALEKGKQIHAHIV 257
Query: 259 KSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVN 318
+S Y+++ + L MY KCG + AR VF+ + + V W +MI G+ G EA
Sbjct: 258 ESEYHSDVRVSTALTKMYMKCGAFKDAREVFECLSYRDVIAWNTMIRGFVDSGQLEEAHG 317
Query: 319 LFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFS 378
F R+L+ V P+ AT T LSACA G L++GKEI +GL S+ + +LI+M+S
Sbjct: 318 TFHRMLEEGVAPDRATYTTVLSACARPGGLARGKEIHARAAKDGLVSDVRFGNALINMYS 377
Query: 379 KCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLF--YKMQHVEGLKPDAVV 436
K G + A++VF+R+P +D+ W+ ++ YA DQ + F +K +G+K + +
Sbjct: 378 KAGSMKDARQVFDRMPKRDVVSWTTLLGRYAD---CDQVVESFTTFKQMLQQGVKANKIT 434
Query: 437 YTSILSACSHS-----------------------------------GMVDDGLSFFKSMQ 461
Y +L ACS+ G V+D + F+ M
Sbjct: 435 YMCVLKACSNPVALKWGKEIHAEVVKAGLLADLAVTNALMSMYFKCGSVEDAIRVFEGMS 494
Query: 462 SNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVE---VQAQVWAPLLSACMKHHNV 518
+ + L+ LG+ GR AL+ M E A + +LSAC + V
Sbjct: 495 MR-----DVVTWNTLIGGLGQNGRGLEALQRYEVMKSEGMRPNAATFVNVLSACRVCNLV 549
Query: 519 ELGE----YAAKNLLTLNPGSTGNYILMANLFTSAGMWKEA 555
E G + +K+ + + +Y M ++ AG +EA
Sbjct: 550 EEGRRQFAFMSKDYGIVP--TEKHYACMVDILARAGHLREA 588
Score = 228 bits (581), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 122/382 (31%), Positives = 204/382 (53%), Gaps = 7/382 (1%)
Query: 120 VLKEMWVLGLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMY 175
VL+ + G ++ + +V ++ C G +H + + G+ N + + N+++ +Y
Sbjct: 15 VLQYLHRKGPQVDSYDYVKLLQSCVKAKDLAVGKQVHEHILRCGVKPN-VYITNTLLKLY 73
Query: 176 AKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFL 235
A G VNEAR +FD+ S+VSW +I GY + G EAF L M++ + PD F+
Sbjct: 74 AHCGSVNEARQLFDKFSNKSVVSWNVMISGYAHRGLAQEAFNLFTLMQQERLEPDKFTFV 133
Query: 236 NLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEK 295
+++ C+ L +H ++++G N+ + N L+SMY KCG + ARRVFDA+ +
Sbjct: 134 SILSACSSPAVLNWGREIHVRVMEAGLANDTTVGNALISMYAKCGSVRDARRVFDAMASR 193
Query: 296 SVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIE 355
WT++ G YA+ GY E++ + +L+ VRP+ T LSAC L +L KGK+I
Sbjct: 194 DEVSWTTLTGAYAESGYGEESLKTYHAMLQERVRPSRITYMNVLSACGSLAALEKGKQIH 253
Query: 356 EYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGD 415
+IV + S+ +V T+L M+ KCG A+EVFE + +D+ W+ MI G+ G +
Sbjct: 254 AHIVESEYHSDVRVSTALTKMYMKCGAFKDAREVFECLSYRDVIAWNTMIRGFVDSGQLE 313
Query: 416 QALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLC 475
+A F++M EG+ PD YT++LSAC+ G + G + G+ +
Sbjct: 314 EAHGTFHRMLE-EGVAPDRATYTTVLSACARPGGLARGKEIHARAAKD-GLVSDVRFGNA 371
Query: 476 LVDLLGRAGRFDLALKTIHEMP 497
L+++ +AG A + MP
Sbjct: 372 LINMYSKAGSMKDARQVFDRMP 393
>gi|225465296|ref|XP_002268999.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g14470-like [Vitis vinifera]
Length = 729
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 208/622 (33%), Positives = 334/622 (53%), Gaps = 48/622 (7%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
M+R ++ + + Y M GV ++F +P+++K+ G H+HVLK+G
Sbjct: 71 MLRFYSHLQDHAKVVLMYEQMQGCGVRPDAFVYPILIKSAGT-----GGIGFHAHVLKLG 125
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
DAFV+ +IDMY++ +RKV DE+P R V WN+++S + + +A +
Sbjct: 126 HGSDAFVRNAVIDMYARLGPIGHARKVFDEIPDYERKVADWNAMVSGYWKWESEGQAQWL 185
Query: 121 LKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGK 180
M E + T+ ++V+G YAK
Sbjct: 186 FDVM----PERNVITWTAMVTG--------------------------------YAKVKD 209
Query: 181 VNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILG 240
+ AR FD + E S+VSW ++ GY G EA L ++M + PD ++ +I
Sbjct: 210 LEAARRYFDCMPERSVVSWNAMLSGYAQNGLAEEALRLFDEMVNAGIEPDETTWVTVISA 269
Query: 241 CAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLW 300
C+ G+ LA S+ L + + L+ MY K GDL+ AR++F+ + ++V W
Sbjct: 270 CSSRGDPCLAASLVRTLHQKRIQLNCFVRTALLDMYAKFGDLDSARKLFNTMPGRNVVTW 329
Query: 301 TSMIGGYAQLGYPSEAVNLFKRLLKTS-VRPNEATLATTLSACAELGSLSKGKEIEEYIV 359
SMI GYAQ G + A+ LFK ++ + P+E T+ + +SAC LG+L G + ++
Sbjct: 330 NSMIAGYAQNGQSAMAIELFKEMITAKKLTPDEVTMVSVISACGHLGALELGNWVVRFLT 389
Query: 360 LNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALN 419
N ++ + ++I M+S+CG + AK VF+ + +D+ ++ +I+G+A HG G +A+N
Sbjct: 390 ENQIKLSISGHNAMIFMYSRCGSMEDAKRVFQEMATRDVVSYNTLISGFAAHGHGVEAIN 449
Query: 420 LFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDL 479
L M+ G++PD V + +L+ACSH+G++++G F+S++ +P+I+HY C+VDL
Sbjct: 450 LMSTMKE-GGIEPDRVTFIGVLTACSHAGLLEEGRKVFESIK-----DPAIDHYACMVDL 503
Query: 480 LGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNY 539
LGR G + A +T+ MP+E A V+ LL+A H VELGE AA L L P ++GN+
Sbjct: 504 LGRVGELEDAKRTMERMPMEPHAGVYGSLLNASRIHKQVELGELAANKLFELEPDNSGNF 563
Query: 540 ILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIR 599
IL++N++ SAG WK+ R M + K GWS VE G + F+ DRSH S DI
Sbjct: 564 ILLSNIYASAGRWKDVERIREAMKKGGVKKTTGWSWVEYGGKLHKFIVADRSHERSDDIY 623
Query: 600 KTLKELHIKLLEAGYIAEADIV 621
+ L EL K+ EAGYIA+ V
Sbjct: 624 QLLIELRKKMREAGYIADKSCV 645
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 87/374 (23%), Positives = 165/374 (44%), Gaps = 70/374 (18%)
Query: 187 IFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGN 246
+F+ ++ +T+++ Y ++ + + + QM+ V PD V+ LI G
Sbjct: 56 LFNSTLNPNVFVFTSMLRFYSHLQDHAKVVLMYEQMQGCGVRPDAFVYPILIKSAGTGG- 114
Query: 247 LFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAV-------------- 292
+ H+ +LK G+ ++ + N ++ MY + G + AR+VFD +
Sbjct: 115 ----IGFHAHVLKLGHGSDAFVRNAVIDMYARLGPIGHARKVFDEIPDYERKVADWNAMV 170
Query: 293 -------------------LEKSVFLWTSMIGGYAQL----------------------- 310
E++V WT+M+ GYA++
Sbjct: 171 SGYWKWESEGQAQWLFDVMPERNVITWTAMVTGYAKVKDLEAARRYFDCMPERSVVSWNA 230
Query: 311 --------GYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNG 362
G EA+ LF ++ + P+E T T +SAC+ G + +
Sbjct: 231 MLSGYAQNGLAEEALRLFDEMVNAGIEPDETTWVTVISACSSRGDPCLAASLVRTLHQKR 290
Query: 363 LESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFY 422
++ N V+T+L+ M++K G ++ A+++F +P +++ W++MI GYA +G A+ LF
Sbjct: 291 IQLNCFVRTALLDMYAKFGDLDSARKLFNTMPGRNVVTWNSMIAGYAQNGQSAMAIELFK 350
Query: 423 KMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGR 482
+M + L PD V S++SAC H G ++ G + + N I+ SI + ++ + R
Sbjct: 351 EMITAKKLTPDEVTMVSVISACGHLGALELGNWVVRFLTEN-QIKLSISGHNAMIFMYSR 409
Query: 483 AGRFDLALKTIHEM 496
G + A + EM
Sbjct: 410 CGSMEDAKRVFQEM 423
>gi|225444744|ref|XP_002278128.1| PREDICTED: pentatricopeptide repeat-containing protein At1g11290
[Vitis vinifera]
Length = 597
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 206/580 (35%), Positives = 332/580 (57%), Gaps = 22/580 (3%)
Query: 22 LQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCS-- 79
+T H SF + +L C+ S+ D R+H+ V+ G Q+ + T LI + C
Sbjct: 23 FRTNYHSRSFNY--LLNCCS---SLPDLSRIHALVVTNGCGQNLLLSTKLI--ITACCLA 75
Query: 80 ---DFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTF 136
D+ +RK+ D+MP R V WN++I ++ A +EA+ + M GL TF
Sbjct: 76 PTMDY--ARKMFDQMPKR--DVFLWNTLIRGYADAGPCEEALALYSNMHGAGLFPDNYTF 131
Query: 137 VSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIG 192
VV C+ R+G +HC + K G ++++ + +S+++MY++ G+ +F E+
Sbjct: 132 PFVVRSCAVLSALREGKEVHCNIVKHGF-DSDVFVQSSLVAMYSQSGETLGMELVFGEMV 190
Query: 193 ETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALS 252
+IVSWT +I GYV E G+ +M P+ V ++++ CA + L L
Sbjct: 191 VRNIVSWTAVIAGYVQNRYFKEGLGVFREMVGSGTQPNAVTLVSVLPACAGLEFLNLGKL 250
Query: 253 MHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGY 312
+H +K G + + L N L+++Y KCG++E AR +FD ++ +++ W +MI Y Q
Sbjct: 251 IHGYGIKLGVDPDVSLTNALIALYGKCGNVETARSLFDGMVVQNLVSWNAMIAAYEQNNA 310
Query: 313 PSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTS 372
+ AV LF+R+ V + T+ + +SACA LG+L+ G+ + E + GLE N + +
Sbjct: 311 GANAVKLFRRMQAEKVDFDYITMVSVISACASLGALNTGRWMHELVKRKGLEINVSITNA 370
Query: 373 LIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKP 432
LI M++KCG I+ A+EVFER+P + + W++MI A HG G+ AL LF +M+ EG+KP
Sbjct: 371 LIDMYAKCGNIDLAREVFERLPCRSVVSWTSMIGACASHGHGEDALKLFSRMKD-EGVKP 429
Query: 433 DAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKT 492
++ + ++ +AC HSG+V++G F+SM ++ I P +EH C+VDLLGRAG A +
Sbjct: 430 NSFTFAAVFTACRHSGLVEEGRKHFESMMRDYSIMPGVEHCACMVDLLGRAGSLMEAYEF 489
Query: 493 IHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMW 552
I +MPVE VW LL +C H N+EL E A+ L L+P + Y+LM+N++ AG W
Sbjct: 490 IDKMPVEPDVSVWGALLGSCRIHSNLELAELVAEKLFLLDPQTVTFYVLMSNIYAEAGRW 549
Query: 553 KEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSH 592
++AA R LM++R L K PG S VE++ F++G RS
Sbjct: 550 EDAARLRKLMEERELKKIPGHSLVEVNRRFHTFLSGSRSQ 589
Score = 233 bits (595), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 130/420 (30%), Positives = 234/420 (55%), Gaps = 15/420 (3%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+IR + G EE L+ YS+M G+ +++TFP V+++CA ++++ +GK VH +++K G
Sbjct: 99 LIRGYADAGPCEEALALYSNMHGAGLFPDNYTFPFVVRSCAVLSALREGKEVHCNIVKHG 158
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F D FVQ+ L+ MYS+ + + V EM V R++VSW ++I+ + + E + V
Sbjct: 159 FDSDVFVQSSLVAMYSQSGETLGMELVFGEMVV--RNIVSWTAVIAGYVQNRYFKEGLGV 216
Query: 121 LKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGL---LNNEIPLANSVMSMYAK 177
+EM G + +A T VSV+ C+ + +++ ++ G+ ++ ++ L N+++++Y K
Sbjct: 217 FREMVGSGTQPNAVTLVSVLPACAGLEFLNLGKLIHGYGIKLGVDPDVSLTNALIALYGK 276
Query: 178 FGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNL 237
G V ARS+FD + ++VSW +I Y A L +M+ V D + +++
Sbjct: 277 CGNVETARSLFDGMVVQNLVSWNAMIAAYEQNNAGANAVKLFRRMQAEKVDFDYITMVSV 336
Query: 238 ILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSV 297
I CA +G L MH L+ + G + N L+ MY KCG+++LAR VF+ + +SV
Sbjct: 337 ISACASLGALNTGRWMHELVKRKGLEINVSITNALIDMYAKCGNIDLAREVFERLPCRSV 396
Query: 298 FLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKE---- 353
WTSMIG A G+ +A+ LF R+ V+PN T A +AC G + +G++
Sbjct: 397 VSWTSMIGACASHGHGEDALKLFSRMKDEGVKPNSFTFAAVFTACRHSGLVEEGRKHFES 456
Query: 354 -IEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVP-DKDLAVWSAMINGYAIH 411
+ +Y ++ G+E ++ + + G + +A E +++P + D++VW A++ IH
Sbjct: 457 MMRDYSIMPGVEHC----ACMVDLLGRAGSLMEAYEFIDKMPVEPDVSVWGALLGSCRIH 512
>gi|297822535|ref|XP_002879150.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297324989|gb|EFH55409.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 872
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 210/625 (33%), Positives = 349/625 (55%), Gaps = 18/625 (2%)
Query: 3 RNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQ 62
RNS N EE L+ + M G NSFTF L A G +VH+ V+K G
Sbjct: 175 RNSLN----EEVLTLFMRMQDEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLD 230
Query: 63 QDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLK 122
+ V LI++Y KC + +R + D+ V+ SVV+WNS+IS ++ L+ EA+ +
Sbjct: 231 KTIPVSNSLINLYLKCGNVRKARILFDKTEVK--SVVTWNSMISGYAANGLDLEALGMFY 288
Query: 123 EMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKF 178
M + + LS S+F S++ C+ R +HC V K G + ++ + ++M Y+K
Sbjct: 289 SMRLNHVRLSESSFASIIKLCANLKELRFTEQLHCSVVKYGFVFDQ-NIRTALMVAYSKC 347
Query: 179 GKVNEARSIFDEIGET-SIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNL 237
+ +A +F E G ++VSWT +I G++ EA GL ++M+R V P+ + ++
Sbjct: 348 MAMLDALRLFKETGFLGNVVSWTAMISGFLQNDGKEEAVGLFSEMKRKGVRPNEFTY-SV 406
Query: 238 ILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSV 297
IL V +H+ ++K+ Y + L+ Y K G ++ A +VF + K +
Sbjct: 407 ILTALPV---ISPSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVDEAAKVFSGIDNKDI 463
Query: 298 FLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACA-ELGSLSKGKEIEE 356
W++M+ GYAQ G A+ +F L K V+PNE T ++ L+ CA S+ +GK+
Sbjct: 464 VAWSAMLAGYAQAGETEAAIKIFSELTKGGVKPNEFTFSSILNVCAATTASMGQGKQFHG 523
Query: 357 YIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQ 416
+ + + L+S+ V ++L+ M++K G I A+EVF+R +KDL W++MI+GYA HG +
Sbjct: 524 FAIKSRLDSSLCVSSALLTMYAKKGHIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMK 583
Query: 417 ALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCL 476
AL++F +M+ +K D+V + + +AC+H+G+V++G +F M + I P+ EH C+
Sbjct: 584 ALDVFKEMKK-RKVKMDSVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCM 642
Query: 477 VDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGST 536
VDL RAG+ + A+K I MP + +W +L+AC H ELG AA+ ++ + P +
Sbjct: 643 VDLYSRAGQLEKAMKVIDNMPNLAGSTIWRTILAACRVHKKTELGRLAAEKIIAMIPEDS 702
Query: 537 GNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSV 596
Y+L++N++ +G W+E A R LM++R + KEPG+S +E+ F+AGDRSH L
Sbjct: 703 AAYVLLSNMYAESGDWQERAKVRKLMNERNVKKEPGYSWIEVKNKTYAFLAGDRSHPLKD 762
Query: 597 DIRKTLKELHIKLLEAGYIAEADIV 621
I L++L +L + GY + V
Sbjct: 763 QIYMKLEDLSTRLKDLGYEPDTSYV 787
Score = 221 bits (563), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 152/521 (29%), Positives = 261/521 (50%), Gaps = 26/521 (4%)
Query: 6 TNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDA 65
+ +G +E + ++ G+ + F VLK A + G+++H +K GF D
Sbjct: 73 SRDGRTQEATRLFLNIQHLGMEMDCSIFSSVLKVSATLCDELFGRQLHCQCIKFGFLDDV 132
Query: 66 FVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMW 125
V T L+D Y K S+F R V DEM + R+VV+W ++IS ++R LN+E + + M
Sbjct: 133 SVGTSLVDTYMKGSNFKDGRNVFDEM--KERNVVTWTTLISGYARNSLNEEVLTLFMRMQ 190
Query: 126 VLGLELSASTFVSVV-----SGCSFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGK 180
G + ++ TF + + G R G+ +H V K G L+ IP++NS++++Y K G
Sbjct: 191 DEGTQPNSFTFAAALGVLAEEGVGGR-GLQVHTVVVKNG-LDKTIPVSNSLINLYLKCGN 248
Query: 181 VNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILG 240
V +AR +FD+ S+V+W ++I GY G EA G+ MR V F ++I
Sbjct: 249 VRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNHVRLSESSFASIIKL 308
Query: 241 CAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAV-LEKSVFL 299
CA + L +H ++K G+ + + L+ Y+KC + A R+F +V
Sbjct: 309 CANLKELRFTEQLHCSVVKYGFVFDQNIRTALMVAYSKCMAMLDALRLFKETGFLGNVVS 368
Query: 300 WTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIV 359
WT+MI G+ Q EAV LF + + VRPNE T + L+A + E+ +V
Sbjct: 369 WTAMISGFLQNDGKEEAVGLFSEMKRKGVRPNEFTYSVILTALPVISP----SEVHAQVV 424
Query: 360 LNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALN 419
E + V T+L+ + K G++++A +VF + +KD+ WSAM+ GYA G + A+
Sbjct: 425 KTNYERSSTVGTALLDAYVKLGKVDEAAKVFSGIDNKDIVAWSAMLAGYAQAGETEAAIK 484
Query: 420 LFYKMQHVEGLKPDAVVYTSILSAC-SHSGMVDDGLSFFKSMQSNFGIEPSIEHYLC--- 475
+F ++ G+KP+ ++SIL+ C + + + G F F I+ ++ LC
Sbjct: 485 IFSELTK-GGVKPNEFTFSSILNVCAATTASMGQGKQF-----HGFAIKSRLDSSLCVSS 538
Query: 476 -LVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKH 515
L+ + + G + A + + + E W ++S +H
Sbjct: 539 ALLTMYAKKGHIESA-EEVFKRQREKDLVSWNSMISGYAQH 578
Score = 169 bits (427), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 107/362 (29%), Positives = 191/362 (52%), Gaps = 9/362 (2%)
Query: 87 VLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVV----SG 142
+ D+ P R R S+ S++ SR EA + + LG+E+ S F SV+ +
Sbjct: 53 LFDKSPDRDRE--SYTSLLFGFSRDGRTQEATRLFLNIQHLGMEMDCSIFSSVLKVSATL 110
Query: 143 CSFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTI 202
C G +HC K G L+ ++ + S++ Y K + R++FDE+ E ++V+WTT+
Sbjct: 111 CDELFGRQLHCQCIKFGFLD-DVSVGTSLVDTYMKGSNFKDGRNVFDEMKERNVVTWTTL 169
Query: 203 IGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGY 262
I GY E L +M+ P+ F + A+ G L +H++++K+G
Sbjct: 170 ISGYARNSLNEEVLTLFMRMQDEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGL 229
Query: 263 NNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKR 322
+ P+ N L+++Y KCG++ AR +FD KSV W SMI GYA G EA+ +F
Sbjct: 230 DKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYS 289
Query: 323 LLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGR 382
+ VR +E++ A+ + CA L L +++ +V G ++ ++T+L+ +SKC
Sbjct: 290 MRLNHVRLSESSFASIIKLCANLKELRFTEQLHCSVVKYGFVFDQNIRTALMVAYSKCMA 349
Query: 383 INKAKEVFERVPD-KDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSIL 441
+ A +F+ ++ W+AMI+G+ + ++A+ LF +M+ +G++P+ Y+ IL
Sbjct: 350 MLDALRLFKETGFLGNVVSWTAMISGFLQNDGKEEAVGLFSEMKR-KGVRPNEFTYSVIL 408
Query: 442 SA 443
+A
Sbjct: 409 TA 410
Score = 165 bits (417), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 106/414 (25%), Positives = 203/414 (49%), Gaps = 5/414 (1%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI NG E L + SM V + +F ++K CAN+ + +++H V+K G
Sbjct: 270 MISGYAANGLDLEALGMFYSMRLNHVRLSESSFASIIKLCANLKELRFTEQLHCSVVKYG 329
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F D ++T L+ YSKC + + ++ E L +VVSW ++IS + +EA+ +
Sbjct: 330 FVFDQNIRTALMVAYSKCMAMLDALRLFKETGF-LGNVVSWTAMISGFLQNDGKEEAVGL 388
Query: 121 LKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGK 180
EM G+ + T+ +++ +H V K + + +++ Y K GK
Sbjct: 389 FSEMKRKGVRPNEFTYSVILTALPVISPSEVHAQVVKTNYERSS-TVGTALLDAYVKLGK 447
Query: 181 VNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILG 240
V+EA +F I IV+W+ ++ GY G A + +++ + V P+ F +++
Sbjct: 448 VDEAAKVFSGIDNKDIVAWSAMLAGYAQAGETEAAIKIFSELTKGGVKPNEFTFSSILNV 507
Query: 241 C-AQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFL 299
C A ++ H +KS ++ + + L++MY K G +E A VF EK +
Sbjct: 508 CAATTASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGHIESAEEVFKRQREKDLVS 567
Query: 300 WTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIV 359
W SMI GYAQ G +A+++FK + K V+ + T +AC G + +G++ + +V
Sbjct: 568 WNSMISGYAQHGQAMKALDVFKEMKKRKVKMDSVTFIGVFAACTHAGLVEEGEKYFDIMV 627
Query: 360 LN-GLESNRQVQTSLIHMFSKCGRINKAKEVFERVPD-KDLAVWSAMINGYAIH 411
+ + ++ + ++ ++S+ G++ KA +V + +P+ +W ++ +H
Sbjct: 628 RDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIDNMPNLAGSTIWRTILAACRVH 681
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 75/263 (28%), Positives = 140/263 (53%), Gaps = 1/263 (0%)
Query: 184 ARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQ 243
A ++FD+ + S+T+++ G+ G EA L ++ + + D +F +++ A
Sbjct: 50 AHNLFDKSPDRDRESYTSLLFGFSRDGRTQEATRLFLNIQHLGMEMDCSIFSSVLKVSAT 109
Query: 244 VGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSM 303
+ + +H +K G+ ++ + LV Y K + + R VFD + E++V WT++
Sbjct: 110 LCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRNVFDEMKERNVVTWTTL 169
Query: 304 IGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGL 363
I GYA+ E + LF R+ +PN T A L AE G +G ++ +V NGL
Sbjct: 170 ISGYARNSLNEEVLTLFMRMQDEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGL 229
Query: 364 ESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYK 423
+ V SLI+++ KCG + KA+ +F++ K + W++MI+GYA +G+ +AL +FY
Sbjct: 230 DKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYS 289
Query: 424 MQHVEGLKPDAVVYTSILSACSH 446
M+ + ++ + SI+ C++
Sbjct: 290 MR-LNHVRLSESSFASIIKLCAN 311
>gi|255542116|ref|XP_002512122.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223549302|gb|EEF50791.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 800
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 204/596 (34%), Positives = 331/596 (55%), Gaps = 10/596 (1%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+I +NG E L + ++ V +S T + AC + + K VH +++
Sbjct: 171 IISCYVDNGESSEGLEMFRLLVSQDVELDSVTMLSIAGACGELGFLRLAKSVHGCIIRQR 230
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+ + L+ MYS+C DF S+ ++ M R S+ SW ++IS ++R+ +A+ V
Sbjct: 231 IETRGPLNDALVLMYSRCDDFSSAERIFSNMFNR--SIASWTAMISCYNRSRWFKQALQV 288
Query: 121 LKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
EM + +A T ++V+S C+ R+G S+HC K L+++ L +++ YA
Sbjct: 289 FVEMLEFKVAPNAVTIMAVLSSCAGFNLLREGKSVHCYAVKHIDLDDD-SLGPALIEYYA 347
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
+FGK++ + IG+ +I+SW +I Y + G EA G+ QM+R PD +
Sbjct: 348 QFGKLSYCEKVLHTIGKRNIISWNMLISVYASQGLFKEALGIFVQMQRQGQIPDSFSLSS 407
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
I CA VG L+L +H +K +E + N L+ MY+KCG ++LA +FD + KS
Sbjct: 408 SISACANVGLLWLGHQIHGYAIKRHILDE-FVQNSLIDMYSKCGHVDLAYLIFDRIQSKS 466
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEE 356
V W SMI G++Q+G EA+ LF ++ + NE T T + AC+ +G L KGK +
Sbjct: 467 VVAWNSMICGFSQIGNSLEAIRLFDQMYLNCLDMNEVTFLTAIQACSHMGHLEKGKWLHH 526
Query: 357 YIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQ 416
++ G++ + + T+LI M++KCG + A VF+ + ++ + WSAMI G +HG D
Sbjct: 527 KLIAYGVKKDLFIDTALIDMYAKCGDLRIAHRVFDSMSERSVVSWSAMIGGCGMHGDIDA 586
Query: 417 ALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCL 476
A++LF +M E +KP+ + + +ILSACSHSG V++G +F SM+ NF +EP++EH+ C+
Sbjct: 587 AISLFAEMIQRE-MKPNDITFMNILSACSHSGYVEEGKFYFNSMK-NFEVEPNLEHFACM 644
Query: 477 VDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGST 536
VDLL RAG D A + I+ MP +A +W LL+ C H +++ ++LL + T
Sbjct: 645 VDLLSRAGDLDEAYRIINSMPFPAEASIWGALLNGCRIHQRMDMIRNIERDLLDMRTDDT 704
Query: 537 GNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSH 592
G Y L++N++ G W + R M L K PG+S +E+D V F AGD SH
Sbjct: 705 GYYTLLSNIYAEEGNWDVSRKVRSAMKGIGLKKVPGYSTIELDKKVYRFGAGDVSH 760
Score = 205 bits (521), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 136/511 (26%), Positives = 252/511 (49%), Gaps = 11/511 (2%)
Query: 13 ETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLI 72
E +S Y+ M+ + + F F VL+ACA ++ G+ VH ++K G D V+T L+
Sbjct: 82 EAISLYNKMIYKQIPISDFIFSSVLRACAGFGNLDVGEEVHGRIIKYGLDVDHVVETSLL 141
Query: 73 DMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELS 132
MY +++KV D M R +VSW+SIIS + + E + + + + +EL
Sbjct: 142 GMYGDLGCLSNAKKVFDNMTT--RDLVSWSSIISCYVDNGESSEGLEMFRLLVSQDVELD 199
Query: 133 ASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIF 188
+ T +S+ C R S+H C+ + + PL ++++ MY++ + A IF
Sbjct: 200 SVTMLSIAGACGELGFLRLAKSVHGCIIR-QRIETRGPLNDALVLMYSRCDDFSSAERIF 258
Query: 189 DEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLF 248
+ SI SWT +I Y +A + +M V P+ V + ++ CA L
Sbjct: 259 SNMFNRSIASWTAMISCYNRSRWFKQALQVFVEMLEFKVAPNAVTIMAVLSSCAGFNLLR 318
Query: 249 LALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYA 308
S+H +K ++D L L+ Y + G L +V + ++++ W +I YA
Sbjct: 319 EGKSVHCYAVKHIDLDDDSLGPALIEYYAQFGKLSYCEKVLHTIGKRNIISWNMLISVYA 378
Query: 309 QLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQ 368
G EA+ +F ++ + P+ +L++++SACA +G L G +I Y + + +
Sbjct: 379 SQGLFKEALGIFVQMQRQGQIPDSFSLSSSISACANVGLLWLGHQIHGYAIKRHI-LDEF 437
Query: 369 VQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVE 428
VQ SLI M+SKCG ++ A +F+R+ K + W++MI G++ G +A+ LF +M ++
Sbjct: 438 VQNSLIDMYSKCGHVDLAYLIFDRIQSKSVVAWNSMICGFSQIGNSLEAIRLFDQM-YLN 496
Query: 429 GLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDL 488
L + V + + + ACSH G ++ G + + +G++ + L+D+ + G +
Sbjct: 497 CLDMNEVTFLTAIQACSHMGHLEKGKWLHHKLIA-YGVKKDLFIDTALIDMYAKCGDLRI 555
Query: 489 ALKTIHEMPVEVQAQVWAPLLSACMKHHNVE 519
A + M E W+ ++ C H +++
Sbjct: 556 AHRVFDSMS-ERSVVSWSAMIGGCGMHGDID 585
Score = 181 bits (459), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 120/442 (27%), Positives = 221/442 (50%), Gaps = 10/442 (2%)
Query: 52 VHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRA 111
+HSH+L G D T LI+ YS+ SS+ V + + W +I H +
Sbjct: 20 LHSHLLVTGLHHDPQASTKLIESYSQIGCLQSSKLVFE--TFQNPDSFMWAVLIKCHVWS 77
Query: 112 CLNDEAILVLKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPL 167
EAI + +M + +S F SV+ C+ G +H + K GL + + +
Sbjct: 78 NFCGEAISLYNKMIYKQIPISDFIFSSVLRACAGFGNLDVGEEVHGRIIKYGLDVDHV-V 136
Query: 168 ANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSV 227
S++ MY G ++ A+ +FD + +VSW++II YV+ G +E + + V
Sbjct: 137 ETSLLGMYGDLGCLSNAKKVFDNMTTRDLVSWSSIISCYVDNGESSEGLEMFRLLVSQDV 196
Query: 228 TPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARR 287
D V L++ C ++G L LA S+H +++ PL++ LV MY++C D A R
Sbjct: 197 ELDSVTMLSIAGACGELGFLRLAKSVHGCIIRQRIETRGPLNDALVLMYSRCDDFSSAER 256
Query: 288 VFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGS 347
+F + +S+ WT+MI Y + + +A+ +F +L+ V PN T+ LS+CA
Sbjct: 257 IFSNMFNRSIASWTAMISCYNRSRWFKQALQVFVEMLEFKVAPNAVTIMAVLSSCAGFNL 316
Query: 348 LSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMING 407
L +GK + Y V + + + +LI +++ G+++ ++V + +++ W+ +I+
Sbjct: 317 LREGKSVHCYAVKHIDLDDDSLGPALIEYYAQFGKLSYCEKVLHTIGKRNIISWNMLISV 376
Query: 408 YAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIE 467
YA G+ +AL +F +MQ +G PD+ +S +SAC++ G++ G ++
Sbjct: 377 YASQGLFKEALGIFVQMQR-QGQIPDSFSLSSSISACANVGLLWLGHQIHGYAIKRHILD 435
Query: 468 PSIEHYLCLVDLLGRAGRFDLA 489
+++ L+D+ + G DLA
Sbjct: 436 EFVQN--SLIDMYSKCGHVDLA 455
>gi|222625907|gb|EEE60039.1| hypothetical protein OsJ_12814 [Oryza sativa Japonica Group]
Length = 852
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 200/624 (32%), Positives = 340/624 (54%), Gaps = 8/624 (1%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
M+ GS + + M +G N T L A + ++ G ++H+ +K G
Sbjct: 218 MMDGYVKAGSVSSAVELFGDMRASGCEPNFATLACFLSVSATESDLFFGVQLHTLAVKYG 277
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+ + V L+ MY+KC K+ MP +V+WN +IS + D+A+L+
Sbjct: 278 LESEVAVANTLVSMYAKCKCLDDGWKLFGLMP--RDDLVTWNGMISGCVQNGFVDQALLL 335
Query: 121 LKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
+M G+ + T VS++ + F QG +H + + ++ ++ L ++++ +Y
Sbjct: 336 FCDMQKSGIRPDSVTLVSLLPALTDLNGFNQGKELHGYIVR-NCVHMDVFLVSALVDIYF 394
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K V A+S++D +V +T+I GYV G EA + + + P+ V +
Sbjct: 395 KCRAVRMAQSVYDSSKAIDVVIGSTMISGYVLNGMSQEAVKMFRYLLEQGIRPNAVAIAS 454
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
++ CA + + L +HS LK+ Y +++ L+ MY KCG L+L+ +F + K
Sbjct: 455 VLPACASMAAMKLGQELHSYALKNAYEGRCYVESALMDMYAKCGRLDLSHYIFSKISAKD 514
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEE 356
W SMI +AQ G P EA+NLF+ + V+ + T+++ LSACA L ++ GKEI
Sbjct: 515 EVTWNSMISSFAQNGEPEEALNLFREMCMEGVKYSNVTISSVLSACASLPAIYYGKEIHG 574
Query: 357 YIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQ 416
++ + ++ +++LI M+ KCG + A VFE +P+K+ W+++I Y +G+ +
Sbjct: 575 VVIKGPIRADLFAESALIDMYGKCGNLEWAHRVFESMPEKNEVSWNSIIASYGAYGLVKE 634
Query: 417 ALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCL 476
+++L MQ EG K D V + +++SAC+H+G V +GL F+ M + I P +EH+ C+
Sbjct: 635 SVSLLRHMQE-EGFKADHVTFLALVSACAHAGQVQEGLRLFRCMTEEYQIAPRMEHFACM 693
Query: 477 VDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGST 536
VDL RAG+ D A++ I +MP + A +W LL AC H NVEL E A++ L L+P ++
Sbjct: 694 VDLYSRAGKLDKAMELIVDMPFKPDAGIWGALLHACRVHRNVELAEIASQELFKLDPHNS 753
Query: 537 GNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSV 596
G Y+LM+N+ AG W + R LM D ++ K PG+S V+++ + +FVA D+SH S
Sbjct: 754 GYYVLMSNINAVAGRWDGVSKVRRLMKDTKVQKIPGYSWVDVNNTSHLFVAADKSHPDSE 813
Query: 597 DIRKTLKELHIKLLEAGYIAEADI 620
DI +LK + ++L E GYI D+
Sbjct: 814 DIYMSLKSILLELREEGYIPMPDL 837
Score = 229 bits (585), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 145/508 (28%), Positives = 261/508 (51%), Gaps = 21/508 (4%)
Query: 1 MIRNSTNNGSFEETLSTYSSML--QTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLK 58
+IR T G + L Y M + +S TFP V+K+CA + +I G+ VH
Sbjct: 115 LIRGLTMAGDYRSALLFYLKMWAHPSAPLPDSHTFPYVVKSCAALGAIALGRLVHRTART 174
Query: 59 VGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAI 118
+G D FV + LI MY+ +R+V D M R V WN ++ + +A A+
Sbjct: 175 LGLDGDMFVGSALIKMYANGGLLWDARQVFDGMAE--RDCVLWNVMMDGYVKAGSVSSAV 232
Query: 119 LVLKEMWVLGLELSASTFVSVVSGCSFRQ----GISMHCCVYKLGLLNNEIPLANSVMSM 174
+ +M G E + +T +S + G+ +H K G L +E+ +AN+++SM
Sbjct: 233 ELFGDMRASGCEPNFATLACFLSVSATESDLFFGVQLHTLAVKYG-LESEVAVANTLVSM 291
Query: 175 YAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVF 234
YAK +++ +F + +V+W +I G V G V++A L M++ + PD V
Sbjct: 292 YAKCKCLDDGWKLFGLMPRDDLVTWNGMISGCVQNGFVDQALLLFCDMQKSGIRPDSVTL 351
Query: 235 LNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLE 294
++L+ + +H ++++ + + L + LV +Y KC + +A+ V+D+
Sbjct: 352 VSLLPALTDLNGFNQGKELHGYIVRNCVHMDVFLVSALVDIYFKCRAVRMAQSVYDSSKA 411
Query: 295 KSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEI 354
V + ++MI GY G EAV +F+ LL+ +RPN +A+ L ACA + ++ G+E+
Sbjct: 412 IDVVIGSTMISGYVLNGMSQEAVKMFRYLLEQGIRPNAVAIASVLPACASMAAMKLGQEL 471
Query: 355 EEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMG 414
Y + N E V+++L+ M++KCGR++ + +F ++ KD W++MI+ +A +G
Sbjct: 472 HSYALKNAYEGRCYVESALMDMYAKCGRLDLSHYIFSKISAKDEVTWNSMISSFAQNGEP 531
Query: 415 DQALNLFYKMQHVEGLKPDAVVYTSILSACS-----HSGMVDDGLSFFKSMQSNFGIEPS 469
++ALNLF +M +EG+K V +S+LSAC+ + G G+ ++++ E +
Sbjct: 532 EEALNLFREMC-MEGVKYSNVTISSVLSACASLPAIYYGKEIHGVVIKGPIRADLFAESA 590
Query: 470 IEHYLCLVDLLGRAGRFDLALKTIHEMP 497
L+D+ G+ G + A + MP
Sbjct: 591 ------LIDMYGKCGNLEWAHRVFESMP 612
Score = 192 bits (489), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 131/462 (28%), Positives = 226/462 (48%), Gaps = 11/462 (2%)
Query: 36 VLKACANINSIWDGKRVHSHVLKVGFQ-QDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVR 94
VL+ C + + + G +VH + G D +QT L+ MY F + V +P
Sbjct: 45 VLRGCVSPSHLSLGLQVHGRAVTAGLHATDTALQTRLVGMYVLARRFRDAVAVFSSLPRG 104
Query: 95 LRS-VVSWNSIISAHSRACLNDEAILVLKEMWV-LGLELSAS-TFVSVVSGCSFRQGISM 151
+ + WN +I + A A+L +MW L S TF VV C+ I++
Sbjct: 105 AAACALPWNWLIRGLTMAGDYRSALLFYLKMWAHPSAPLPDSHTFPYVVKSCAALGAIAL 164
Query: 152 HCCVYK----LGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYV 207
V++ LGL + ++ + ++++ MYA G + +AR +FD + E V W ++ GYV
Sbjct: 165 GRLVHRTARTLGL-DGDMFVGSALIKMYANGGLLWDARQVFDGMAERDCVLWNVMMDGYV 223
Query: 208 NVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDP 267
G+V+ A L MR P+ + A +LF + +H+L +K G +E
Sbjct: 224 KAGSVSSAVELFGDMRASGCEPNFATLACFLSVSATESDLFFGVQLHTLAVKYGLESEVA 283
Query: 268 LDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTS 327
+ N LVSMY KC L+ ++F + + W MI G Q G+ +A+ LF + K+
Sbjct: 284 VANTLVSMYAKCKCLDDGWKLFGLMPRDDLVTWNGMISGCVQNGFVDQALLLFCDMQKSG 343
Query: 328 VRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAK 387
+RP+ TL + L A +L ++GKE+ YIV N + + + ++L+ ++ KC + A+
Sbjct: 344 IRPDSVTLVSLLPALTDLNGFNQGKELHGYIVRNCVHMDVFLVSALVDIYFKCRAVRMAQ 403
Query: 388 EVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHS 447
V++ D+ + S MI+GY ++GM +A+ +F + +G++P+AV S+L AC+
Sbjct: 404 SVYDSSKAIDVVIGSTMISGYVLNGMSQEAVKMFRYLLE-QGIRPNAVAIASVLPACASM 462
Query: 448 GMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLA 489
+ G N E L+D+ + GR DL+
Sbjct: 463 AAMKLGQELHSYALKN-AYEGRCYVESALMDMYAKCGRLDLS 503
>gi|357149883|ref|XP_003575265.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Brachypodium distachyon]
Length = 877
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 203/618 (32%), Positives = 333/618 (53%), Gaps = 8/618 (1%)
Query: 7 NNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAF 66
N + + M+ GV N F F V+ AC + G++VH+ V++ G+ +D F
Sbjct: 179 KNDRCSHAVKVFGEMVWGGVQPNEFGFSCVVNACTGSRDLEAGRKVHAMVIRTGYDKDVF 238
Query: 67 VQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWV 126
L+DMYSK D + V ++P VVSWN+ IS + A+ +L +M
Sbjct: 239 TANALVDMYSKLGDIRMAAVVFGKVPET--DVVSWNAFISGCVLHGHDQHALELLLQMKS 296
Query: 127 LGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVN 182
GL + T S++ C+ F G +H + K +++ +A ++ MYAK G ++
Sbjct: 297 SGLVPNVFTLSSILKACAGSGAFNLGRQIHGFMVKANA-DSDNYIAFGLVDMYAKHGLLD 355
Query: 183 EARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCA 242
+A+ +FD I + +V W +I G + EA L +MR+ + ++ A
Sbjct: 356 DAKKVFDWIPQRDLVLWNALISGCSHGAQHAEALSLFCRMRKEGFDVNRTTLAAVLKSTA 415
Query: 243 QVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTS 302
+ + +H+L K G+ ++ + N L+ Y KC L A RVF+ + +TS
Sbjct: 416 SLEAISDTRQVHALAEKLGFLSDSHVVNGLIDSYWKCDCLNYAYRVFEKHGSYDIIAFTS 475
Query: 303 MIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNG 362
MI +Q + +A+ LF +L+ + P+ L++ L+ACA L + +GK++ +++
Sbjct: 476 MITALSQCDHGEDAIKLFMEMLRKGLDPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQ 535
Query: 363 LESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFY 422
S+ +L++ ++KCG I A F +P+K + WSAMI G A HG G +AL++F+
Sbjct: 536 FMSDVFAGNALVYTYAKCGSIEDADLAFSGLPEKGVVSWSAMIGGLAQHGHGKRALDVFH 595
Query: 423 KMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGR 482
+M E + P+ + TS+L AC+H+G+VD+ +F SM+ FGIE + EHY C++DLLGR
Sbjct: 596 RMVD-EHISPNHITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIERTEEHYACMIDLLGR 654
Query: 483 AGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILM 542
AG+ D A++ ++ MP + A VW LL+A H + ELG AA+ L L P +G ++L+
Sbjct: 655 AGKLDDAMELVNSMPFQTNAAVWGALLAASRVHRDPELGRLAAEKLFILEPEKSGTHVLL 714
Query: 543 ANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTL 602
AN + SAGMW + A R LM D ++ KEP S VE+ V F+ GD+SH + DI L
Sbjct: 715 ANTYASAGMWDDVAKVRKLMKDSKVKKEPAMSWVELKDKVHTFIVGDKSHPRARDIYAKL 774
Query: 603 KELHIKLLEAGYIAEADI 620
EL + +AGY+ ++
Sbjct: 775 DELGDLMTKAGYVPNVEV 792
Score = 206 bits (523), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 133/449 (29%), Positives = 224/449 (49%), Gaps = 10/449 (2%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
++ +NN + L + SM V N F P+VLK CA G ++H+ + G
Sbjct: 74 LVTAYSNNAMPRDALGAFRSMRSCSVRCNEFVLPVVLK-CAPDAGF--GTQLHALAMATG 130
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
D FV L+ MY +R V DE R+ VSWN ++SA+ + A+ V
Sbjct: 131 LGGDIFVANALVAMYGGFGFVDEARMVFDEAGCE-RNTVSWNGLMSAYVKNDRCSHAVKV 189
Query: 121 LKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
EM G++ + F VV+ C+ G +H V + G + ++ AN+++ MY+
Sbjct: 190 FGEMVWGGVQPNEFGFSCVVNACTGSRDLEAGRKVHAMVIRTG-YDKDVFTANALVDMYS 248
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K G + A +F ++ ET +VSW I G V G+ A L QM+ + P++ +
Sbjct: 249 KLGDIRMAAVVFGKVPETDVVSWNAFISGCVLHGHDQHALELLLQMKSSGLVPNVFTLSS 308
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
++ CA G L +H ++K+ ++++ + LV MY K G L+ A++VFD + ++
Sbjct: 309 ILKACAGSGAFNLGRQIHGFMVKANADSDNYIAFGLVDMYAKHGLLDDAKKVFDWIPQRD 368
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEE 356
+ LW ++I G + +EA++LF R+ K N TLA L + A L ++S +++
Sbjct: 369 LVLWNALISGCSHGAQHAEALSLFCRMRKEGFDVNRTTLAAVLKSTASLEAISDTRQVHA 428
Query: 357 YIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQ 416
G S+ V LI + KC +N A VFE+ D+ +++MI + G+
Sbjct: 429 LAEKLGFLSDSHVVNGLIDSYWKCDCLNYAYRVFEKHGSYDIIAFTSMITALSQCDHGED 488
Query: 417 ALNLFYKMQHVEGLKPDAVVYTSILSACS 445
A+ LF +M +GL PD V +S+L+AC+
Sbjct: 489 AIKLFMEMLR-KGLDPDPFVLSSLLNACA 516
Score = 196 bits (499), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 126/414 (30%), Positives = 220/414 (53%), Gaps = 13/414 (3%)
Query: 34 PLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPV 93
PL+ + A S+ G +H+H+LK G A + L+ YSKC S+R+V DE+P
Sbjct: 9 PLLTRYAAT-QSLLQGAHIHAHLLKSGLF--AVFRNHLLSFYSKCRLPGSARRVFDEIPD 65
Query: 94 RLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFV-SVVSGCSFRQGI--S 150
VSW+S+++A+S + +A+ + M + + FV VV C+ G
Sbjct: 66 PCH--VSWSSLVTAYSNNAMPRDALGAFRSM--RSCSVRCNEFVLPVVLKCAPDAGFGTQ 121
Query: 151 MHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIG-ETSIVSWTTIIGGYVNV 209
+H GL +I +AN++++MY FG V+EAR +FDE G E + VSW ++ YV
Sbjct: 122 LHALAMATGL-GGDIFVANALVAMYGGFGFVDEARMVFDEAGCERNTVSWNGLMSAYVKN 180
Query: 210 GNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLD 269
+ A + +M V P+ F ++ C +L +H++++++GY+ +
Sbjct: 181 DRCSHAVKVFGEMVWGGVQPNEFGFSCVVNACTGSRDLEAGRKVHAMVIRTGYDKDVFTA 240
Query: 270 NLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVR 329
N LV MY+K GD+ +A VF V E V W + I G G+ A+ L ++ + +
Sbjct: 241 NALVDMYSKLGDIRMAAVVFGKVPETDVVSWNAFISGCVLHGHDQHALELLLQMKSSGLV 300
Query: 330 PNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEV 389
PN TL++ L ACA G+ + G++I ++V +S+ + L+ M++K G ++ AK+V
Sbjct: 301 PNVFTLSSILKACAGSGAFNLGRQIHGFMVKANADSDNYIAFGLVDMYAKHGLLDDAKKV 360
Query: 390 FERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSA 443
F+ +P +DL +W+A+I+G + +AL+LF +M+ EG + ++L +
Sbjct: 361 FDWIPQRDLVLWNALISGCSHGAQHAEALSLFCRMRK-EGFDVNRTTLAAVLKS 413
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 125/249 (50%), Gaps = 7/249 (2%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+I ++ E LS + M + G N T VLK+ A++ +I D ++VH+ K+G
Sbjct: 375 LISGCSHGAQHAEALSLFCRMRKEGFDVNRTTLAAVLKSTASLEAISDTRQVHALAEKLG 434
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F D+ V GLID Y KC + +V ++ ++++ S+I+A S+ ++AI +
Sbjct: 435 FLSDSHVVNGLIDSYWKCDCLNYAYRVFEKHGS--YDIIAFTSMITALSQCDHGEDAIKL 492
Query: 121 LKEMWVLGLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
EM GL+ S+++ C ++ QG +H + K + +++ N+++ YA
Sbjct: 493 FMEMLRKGLDPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFM-SDVFAGNALVYTYA 551
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K G + +A F + E +VSW+ +IGG G+ A + ++M ++P+ + +
Sbjct: 552 KCGSIEDADLAFSGLPEKGVVSWSAMIGGLAQHGHGKRALDVFHRMVDEHISPNHITMTS 611
Query: 237 LILGCAQVG 245
++ C G
Sbjct: 612 VLCACNHAG 620
>gi|225434622|ref|XP_002279360.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 743
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 215/606 (35%), Positives = 331/606 (54%), Gaps = 45/606 (7%)
Query: 50 KRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVS---SRKVLDEMPVRLRSVVSWNSIIS 106
K++H+ +L+ G D F + LI + S F S +++V D++P ++ +WN++I
Sbjct: 52 KQIHAQMLRTGLFFDPFSASRLITA-AALSPFPSLDYAQQVFDQIP--HPNLYTWNTLIR 108
Query: 107 AHSRACLNDEAILVLKEMWVLGLELSAS-TFVSVVSGCS----FRQGISMHCCVYKLGLL 161
A++ + +++L+ M + TF ++ S G + H V K+ LL
Sbjct: 109 AYASSSNPHQSLLIFLRMLHQSPDFPDKFTFPFLIKAASELEELFTGKAFHGMVIKV-LL 167
Query: 162 NNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQ 221
+++ + NS++ YAK G++ +F I +VSW ++I +V G EA L +
Sbjct: 168 GSDVFILNSLIHFYAKCGELGLGYRVFVNIPRRDVVSWNSMITAFVQGGCPEEALELFQE 227
Query: 222 MRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGD 281
M +V P+ + + ++ CA+ + +HS + ++ L N ++ MYTKCG
Sbjct: 228 METQNVKPNGITMVGVLSACAKKSDFEFGRWVHSYIERNRIGESLTLSNAMLDMYTKCGS 287
Query: 282 LELARRVFDAVLEKSVFLWTSMIGGYA-------------------------------QL 310
+E A+R+FD + EK + WT+M+ GYA Q
Sbjct: 288 VEDAKRLFDKMPEKDIVSWTTMLVGYAKIGEYDAAQGIFDAMPNQDIAAWNALISAYEQC 347
Query: 311 GYPSEAVNLFKRL-LKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQV 369
G P EA+ LF L L + +P+E TL +TLSACA+LG++ G I YI G++ N +
Sbjct: 348 GKPKEALELFHELQLSKTAKPDEVTLVSTLSACAQLGAMDLGGWIHVYIKKQGMKLNCHL 407
Query: 370 QTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEG 429
TSLI M+ KCG + KA VF V KD+ VWSAMI G A+HG G A+ LF KMQ +
Sbjct: 408 TTSLIDMYCKCGDLQKALMVFHSVERKDVFVWSAMIAGLAMHGHGKDAIALFSKMQE-DK 466
Query: 430 LKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLA 489
+KP+AV +T+IL ACSH G+V++G +FF M+ +G+ P ++HY C+VD+LGRAG + A
Sbjct: 467 VKPNAVTFTNILCACSHVGLVEEGRTFFNQMELVYGVLPGVKHYACMVDILGRAGLLEEA 526
Query: 490 LKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSA 549
++ I +MP+ A VW LL AC H NV L E A L+ L PG+ G Y+L++N++ A
Sbjct: 527 VELIEKMPMAPAASVWGALLGACTIHENVVLAEQACSQLIELEPGNHGAYVLLSNIYAKA 586
Query: 550 GMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKELHIKL 609
G W + R LM D L KEPG S +E+DG V F+ GD SH + I L E+ +L
Sbjct: 587 GKWDRVSGLRKLMRDVGLKKEPGCSSIEVDGIVHEFLVGDNSHPSAKKIYAKLDEIVARL 646
Query: 610 LEAGYI 615
GY+
Sbjct: 647 ETIGYV 652
Score = 206 bits (524), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 128/450 (28%), Positives = 223/450 (49%), Gaps = 42/450 (9%)
Query: 1 MIRNSTNNGSFEETLSTYSSML-QTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKV 59
+IR ++ + ++L + ML Q+ + FTFP ++KA + + ++ GK H V+KV
Sbjct: 106 LIRAYASSSNPHQSLLIFLRMLHQSPDFPDKFTFPFLIKAASELEELFTGKAFHGMVIKV 165
Query: 60 GFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAIL 119
D F+ LI Y+KC + +V +P R VVSWNS+I+A + +EA+
Sbjct: 166 LLGSDVFILNSLIHFYAKCGELGLGYRVFVNIP--RRDVVSWNSMITAFVQGGCPEEALE 223
Query: 120 VLKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMY 175
+ +EM ++ + T V V+S C+ F G +H + + + + L+N+++ MY
Sbjct: 224 LFQEMETQNVKPNGITMVGVLSACAKKSDFEFGRWVHSYIER-NRIGESLTLSNAMLDMY 282
Query: 176 AKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVT------- 228
K G V +A+ +FD++ E IVSWTT++ GY +G + A G+ + M +
Sbjct: 283 TKCGSVEDAKRLFDKMPEKDIVSWTTMLVGYAKIGEYDAAQGIFDAMPNQDIAAWNALIS 342
Query: 229 -------------------------PDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYN 263
PD V ++ + CAQ+G + L +H + K G
Sbjct: 343 AYEQCGKPKEALELFHELQLSKTAKPDEVTLVSTLSACAQLGAMDLGGWIHVYIKKQGMK 402
Query: 264 NEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRL 323
L L+ MY KCGDL+ A VF +V K VF+W++MI G A G+ +A+ LF ++
Sbjct: 403 LNCHLTTSLIDMYCKCGDLQKALMVFHSVERKDVFVWSAMIAGLAMHGHGKDAIALFSKM 462
Query: 324 LKTSVRPNEATLATTLSACAELGSLSKGKE-IEEYIVLNGLESNRQVQTSLIHMFSKCGR 382
+ V+PN T L AC+ +G + +G+ + ++ G+ + ++ + + G
Sbjct: 463 QEDKVKPNAVTFTNILCACSHVGLVEEGRTFFNQMELVYGVLPGVKHYACMVDILGRAGL 522
Query: 383 INKAKEVFERVPDKDLA-VWSAMINGYAIH 411
+ +A E+ E++P A VW A++ IH
Sbjct: 523 LEEAVELIEKMPMAPAASVWGALLGACTIH 552
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 110/415 (26%), Positives = 198/415 (47%), Gaps = 40/415 (9%)
Query: 137 VSVVSGCS-FRQGISMHCCVYKLGLLNNEIPLANSVM---SMYAKFGKVNEARSIFDEIG 192
+S++ CS +Q +H + + GL + P + S + + + F ++ A+ +FD+I
Sbjct: 39 LSLIDQCSETKQLKQIHAQMLRTGLFFD--PFSASRLITAAALSPFPSLDYAQQVFDQIP 96
Query: 193 ETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVT-PDLVVFLNLILGCAQVGNLFLAL 251
++ +W T+I Y + N +++ + +M S PD F LI +++ LF
Sbjct: 97 HPNLYTWNTLIRAYASSSNPHQSLLIFLRMLHQSPDFPDKFTFPFLIKAASELEELFTGK 156
Query: 252 SMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLG 311
+ H +++K ++ + N L+ Y KCG+L L RVF + + V W SMI + Q G
Sbjct: 157 AFHGMVIKVLLGSDVFILNSLIHFYAKCGELGLGYRVFVNIPRRDVVSWNSMITAFVQGG 216
Query: 312 YPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQT 371
P EA+ LF+ + +V+PN T+ LSACA+ G+ + YI N + + +
Sbjct: 217 CPEEALELFQEMETQNVKPNGITMVGVLSACAKKSDFEFGRWVHSYIERNRIGESLTLSN 276
Query: 372 SLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGD---------------- 415
+++ M++KCG + AK +F+++P+KD+ W+ M+ GYA G D
Sbjct: 277 AMLDMYTKCGSVEDAKRLFDKMPEKDIVSWTTMLVGYAKIGEYDAAQGIFDAMPNQDIAA 336
Query: 416 ---------------QALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSM 460
+AL LF+++Q + KPD V S LSAC+ G +D G +
Sbjct: 337 WNALISAYEQCGKPKEALELFHELQLSKTAKPDEVTLVSTLSACAQLGAMDLG-GWIHVY 395
Query: 461 QSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKH 515
G++ + L+D+ + G AL H + + VW+ +++ H
Sbjct: 396 IKKQGMKLNCHLTTSLIDMYCKCGDLQKALMVFHSVERK-DVFVWSAMIAGLAMH 449
>gi|115465982|ref|NP_001056590.1| Os06g0112000 [Oryza sativa Japonica Group]
gi|7363286|dbj|BAA93030.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113594630|dbj|BAF18504.1| Os06g0112000 [Oryza sativa Japonica Group]
gi|215737111|dbj|BAG96040.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 734
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 202/612 (33%), Positives = 339/612 (55%), Gaps = 7/612 (1%)
Query: 14 TLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLID 73
L+ + +M G TF +LK CA + G+ VH+ + G +A T L +
Sbjct: 43 ALAAFVAMSSAGAPPVLRTFTSLLKLCAARGDLATGRAVHAQLAARGIDSEALAATALAN 102
Query: 74 MYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAI-LVLKEMWVLGLELS 132
MY+KC +R+V D MPVR R V+WN++++ ++R L A+ +V++ G
Sbjct: 103 MYAKCRRPADARRVFDRMPVRDR--VAWNALVAGYARNGLARMAMEMVVRMQEEEGERPD 160
Query: 133 ASTFVSVVSGCSFRQGISMHCCVYKLGL---LNNEIPLANSVMSMYAKFGKVNEARSIFD 189
+ T VSV+ C+ + ++ + + L + +A +++ Y K G + AR +FD
Sbjct: 161 SITLVSVLPACANARALAACREAHAFAIRSGLEELVNVATAILDAYCKCGDIRAARVVFD 220
Query: 190 EIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFL 249
+ + VSW +I GY G+ EA L N+M V V L + C ++G L
Sbjct: 221 WMPTKNSVSWNAMIDGYAQNGDSREALALFNRMVEEGVDVTDVSVLAALQACGELGCLDE 280
Query: 250 ALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQ 309
+ +H LL++ G ++ + N L++MY+KC ++LA VFD + ++ W +MI G AQ
Sbjct: 281 GMRVHELLVRIGLDSNVSVMNALITMYSKCKRVDLASHVFDELDRRTQVSWNAMILGCAQ 340
Query: 310 LGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQV 369
G +AV LF R+ +V+P+ TL + + A A++ + + I Y + L+ + V
Sbjct: 341 NGCSEDAVRLFTRMQLENVKPDSFTLVSVIPALADISDPLQARWIHGYSIRLHLDQDVYV 400
Query: 370 QTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEG 429
T+LI M++KCGR+N A+ +F ++ + W+AMI+GY HG G A+ LF +M+ + G
Sbjct: 401 LTALIDMYAKCGRVNIARILFNSARERHVITWNAMIHGYGSHGFGKAAVELFEEMKSI-G 459
Query: 430 LKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLA 489
+ P+ + S+LSACSH+G+VD+G +F SM+ ++G+EP +EHY +VDLLGRAG+ D A
Sbjct: 460 IVPNETTFLSVLSACSHAGLVDEGREYFTSMKEDYGLEPGMEHYGTMVDLLGRAGKLDEA 519
Query: 490 LKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSA 549
I +MP++ V+ +L AC H NVEL E +A+ + L P ++L+AN++ +A
Sbjct: 520 WAFIQKMPMDPGLSVYGAMLGACKLHKNVELAEESAQKIFELGPQEGVYHVLLANIYANA 579
Query: 550 GMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKELHIKL 609
MWK+ A R M+ L K PGWS +++ + F +G +H + +I L +L ++
Sbjct: 580 SMWKDVARVRTAMEKNGLQKTPGWSIIQLKNEIHTFYSGSTNHQQAKEIYSRLAKLIEEI 639
Query: 610 LEAGYIAEADIV 621
GY+ + D +
Sbjct: 640 KAVGYVPDTDSI 651
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 68/249 (27%), Positives = 127/249 (51%), Gaps = 7/249 (2%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI NG E L+ ++ M++ GV + L+AC + + +G RVH ++++G
Sbjct: 233 MIDGYAQNGDSREALALFNRMVEEGVDVTDVSVLAALQACGELGCLDEGMRVHELLVRIG 292
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+ V LI MYSKC + V DE+ R + VSWN++I ++ +++A+ +
Sbjct: 293 LDSNVSVMNALITMYSKCKRVDLASHVFDELDRRTQ--VSWNAMILGCAQNGCSEDAVRL 350
Query: 121 LKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
M + ++ + T VSV+ + Q +H +L L+ ++ + +++ MYA
Sbjct: 351 FTRMQLENVKPDSFTLVSVIPALADISDPLQARWIHGYSIRLH-LDQDVYVLTALIDMYA 409
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K G+VN AR +F+ E +++W +I GY + G A L +M+ + + P+ FL+
Sbjct: 410 KCGRVNIARILFNSARERHVITWNAMIHGYGSHGFGKAAVELFEEMKSIGIVPNETTFLS 469
Query: 237 LILGCAQVG 245
++ C+ G
Sbjct: 470 VLSACSHAG 478
>gi|225451187|ref|XP_002271063.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Vitis vinifera]
Length = 805
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 216/626 (34%), Positives = 342/626 (54%), Gaps = 10/626 (1%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
M+ +G + ETL + M + +S + LKACA+ G + S ++ G
Sbjct: 101 MLCGYLQSGRYRETLELFGLMRSRNLEVDSCSCTFALKACASSLDYEMGMEIISSAVEKG 160
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+++ FV + +I K +++V D MP + VV WNSII + +A D A +
Sbjct: 161 MEKNRFVGSSMISFLVKFGKIGEAQRVFDGMPNK--DVVCWNSIIGGYVQAGCFDVAFQL 218
Query: 121 LKEMWVLGLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
EM G++ S T S++ C + + G MH V LGL N+I + S + MY+
Sbjct: 219 FFEMHGSGIKPSPITMTSLIQACGGIGNLKLGKCMHGYVLGLGL-GNDILVLTSFVDMYS 277
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K G + AR +F ++ ++VSW +I G V G V E+F L +++ R S DL ++
Sbjct: 278 KMGDIESARWVFYKMPTRNLVSWNAMISGCVRNGLVGESFDLFHRLVRSSGGFDLTTIVS 337
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
L+ GC+Q +L +H ++S + + L +V +Y+KCG L+ A VF+ + +++
Sbjct: 338 LLQGCSQTASLATGKILHGCAIRS-FESNLILSTAIVDLYSKCGSLKQATFVFNRMKDRN 396
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEE 356
V WT+M+ G AQ G+ +A+ LF ++ + + N T + + +CA LGSL +G+ I
Sbjct: 397 VITWTAMLVGLAQNGHAEDALRLFAQMQEEGIAANSVTFVSLVHSCAHLGSLKRGRSIHG 456
Query: 357 YIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVP-DKDLAVWSAMINGYAIHGMGD 415
++ G + T+L+ M++KCG+IN A+ +F KD+ +W++MI GY +HG G
Sbjct: 457 HLFRLGFAFDIVNMTALVDMYAKCGKINLAERIFSHGSISKDVVLWNSMITGYGMHGHGY 516
Query: 416 QALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLC 475
QA+ +++KM EGLKP+ + S+LSACSHS +V+ G+S F SM+ + I P +HY C
Sbjct: 517 QAVGIYHKMIE-EGLKPNQTTFLSLLSACSHSRLVEQGISLFNSMERDHNIRPIEKHYAC 575
Query: 476 LVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGS 535
LVDLL RAGRF+ A I +MP + V LLS C H N+ LG + LL L+ +
Sbjct: 576 LVDLLSRAGRFEEAQALIEKMPFQPGTAVLEALLSGCRTHKNINLGIQTSDKLLALDAMN 635
Query: 536 TGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLS 595
G YI+++N++ A W + RGLM +R L K PG+S VE V F AGD SH
Sbjct: 636 PGIYIMLSNIYAEARRWDKVDYIRGLMRNRGLKKTPGYSLVETGNWVHTFFAGDNSHPNW 695
Query: 596 VDIRKTLKELHIKLLEAGYIAEADIV 621
+I L+ L + +GY+ + V
Sbjct: 696 EEIYHFLESLRSAVETSGYVPDTSCV 721
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 92/363 (25%), Positives = 169/363 (46%), Gaps = 12/363 (3%)
Query: 161 LNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCN 220
L+ + +A ++ Y+ + AR +FD+ + + ++ GY+ G E L
Sbjct: 60 LSTDQFVATKLVKAYSDLRSLEAARYVFDQFFQPKGLLCNAMLCGYLQSGRYRETLELFG 119
Query: 221 QMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCG 280
MR ++ D + CA + + + + S ++ G + + ++S K G
Sbjct: 120 LMRSRNLEVDSCSCTFALKACASSLDYEMGMEIISSAVEKGMEKNRFVGSSMISFLVKFG 179
Query: 281 DLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLS 340
+ A+RVFD + K V W S+IGGY Q G A LF + + ++P+ T+ + +
Sbjct: 180 KIGEAQRVFDGMPNKDVVCWNSIIGGYVQAGCFDVAFQLFFEMHGSGIKPSPITMTSLIQ 239
Query: 341 ACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAV 400
AC +G+L GK + Y++ GL ++ V TS + M+SK G I A+ VF ++P ++L
Sbjct: 240 ACGGIGNLKLGKCMHGYVLGLGLGNDILVLTSFVDMYSKMGDIESARWVFYKMPTRNLVS 299
Query: 401 WSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSF---- 456
W+AMI+G +G+ ++ +LF+++ G D S+L CS + + G
Sbjct: 300 WNAMISGCVRNGLVGESFDLFHRLVRSSG-GFDLTTIVSLLQGCSQTASLATGKILHGCA 358
Query: 457 FKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHH 516
+S +SN + +I VDL + G A + M + W +L ++
Sbjct: 359 IRSFESNLILSTAI------VDLYSKCGSLKQATFVFNRMK-DRNVITWTAMLVGLAQNG 411
Query: 517 NVE 519
+ E
Sbjct: 412 HAE 414
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 88/309 (28%), Positives = 147/309 (47%), Gaps = 14/309 (4%)
Query: 213 NEAFGLCNQMR--RMSVTPDLVV-FLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLD 269
N+ F CN ++ + + P ++ FL+L+ ++ NL S H+ ++ + + + +
Sbjct: 10 NKPFSTCNPLKDGQFNQLPTIIHNFLSLLRESSK--NLIWVKSTHAQIITNSLSTDQFVA 67
Query: 270 NLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVR 329
LV Y+ LE AR VFD + L +M+ GY Q G E + LF + ++
Sbjct: 68 TKLVKAYSDLRSLEAARYVFDQFFQPKGLLCNAMLCGYLQSGRYRETLELFGLMRSRNLE 127
Query: 330 PNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEV 389
+ + L ACA G EI V G+E NR V +S+I K G+I +A+ V
Sbjct: 128 VDSCSCTFALKACASSLDYEMGMEIISSAVEKGMEKNRFVGSSMISFLVKFGKIGEAQRV 187
Query: 390 FERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGM 449
F+ +P+KD+ W+++I GY G D A LF++M H G+KP + TS++ AC G
Sbjct: 188 FDGMPNKDVVCWNSIIGGYVQAGCFDVAFQLFFEM-HGSGIKPSPITMTSLIQACGGIGN 246
Query: 450 VDDGLSFFKSMQS---NFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWA 506
+ G K M G+ I VD+ + G + A ++MP W
Sbjct: 247 LKLG----KCMHGYVLGLGLGNDILVLTSFVDMYSKMGDIESARWVFYKMPTR-NLVSWN 301
Query: 507 PLLSACMKH 515
++S C+++
Sbjct: 302 AMISGCVRN 310
>gi|255559709|ref|XP_002520874.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540005|gb|EEF41583.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 833
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 206/617 (33%), Positives = 337/617 (54%), Gaps = 8/617 (1%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI NG +E +L Y V S +F L AC + GK+VH +KVG
Sbjct: 212 MIGGFGENGLWENSLEYYLLAKTENVKVVSSSFTCTLSACGQGEFVSFGKQVHCDAIKVG 271
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F+ D +V T L+ MY KC S+ KV +E+P + + WN++ISA+ +A+ +
Sbjct: 272 FEDDPYVHTSLLTMYGKCQMIESAEKVFNEVPDK--EIELWNALISAYVGNGYAYDALRI 329
Query: 121 LKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
K+M + + + T ++V++ S + G +H + K L + I + +++++MY+
Sbjct: 330 YKQMKLCTVLSDSFTILNVLTSSSMAGLYDLGRLIHTEIVKRPL-QSSITIQSALLTMYS 388
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
KFG N A SIF + E +V+W ++I G+ EA M V PD + +
Sbjct: 389 KFGDSNYANSIFSTMKERDVVAWGSVISGFCQNRKYKEALDFFRAMEADLVKPDSDIMAS 448
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
+I C + + L ++H ++KSG + + + L+ MY+K G E A +F + K+
Sbjct: 449 IISACTGLEKVDLGCTIHGFVIKSGLQLDVFVASSLLDMYSKFGFPERAGNIFSDMPLKN 508
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEE 356
+ W S+I Y + P ++NLF ++L+ + P+ + + L+A + + +L KGK +
Sbjct: 509 LVAWNSIISCYCRNNLPDLSINLFSQVLRNDLYPDSVSFTSVLAAISSVAALLKGKSVHG 568
Query: 357 YIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQ 416
Y+V + + QV+ +LI M+ KCG + A+ +FER+ +K+L W++MI GY HG +
Sbjct: 569 YLVRLWIPFDLQVENTLIDMYIKCGLLKYAQHIFERISEKNLVAWNSMIGGYGSHGECSK 628
Query: 417 ALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCL 476
A+ LF +M+ G+KPD V + S+LS+C+HSG++++GL F+ M+ FGIEP +EHY+ +
Sbjct: 629 AIELFDEMRS-SGIKPDDVTFLSLLSSCNHSGLIEEGLHLFEMMKMKFGIEPRMEHYVNI 687
Query: 477 VDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGST 536
VDL GRAG A + MPVE +W LL +C H N+ELGE A LL + P
Sbjct: 688 VDLYGRAGCLGDAYSFVKNMPVEPDRSIWLSLLCSCKIHLNLELGEMVANKLLNMEPSKG 747
Query: 537 GNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSV 596
NY+ + NL+ A +W A R M ++ L K PG S +E+ V VF +GD S ++
Sbjct: 748 SNYVQLLNLYGEAELWDRTANLRASMKEKGLKKTPGCSWIEVRNKVDVFYSGDCSSPITT 807
Query: 597 DIRKTLKELHIKLLEAG 613
+I TL L +++ G
Sbjct: 808 EIYDTLSSLKRNMIKKG 824
Score = 199 bits (505), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 138/524 (26%), Positives = 262/524 (50%), Gaps = 34/524 (6%)
Query: 2 IRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGF 61
I++ + E L Y+ ++ V+ FT+P +LKACA+++++ GK +HS ++ G
Sbjct: 28 IKSLVQQRQYIEALKLYT---KSPVYTTRFTYPSLLKACASLSNLQYGKTIHSSIITTGL 84
Query: 62 QQDAFVQTGLIDMYSKCSDFVSSRKVLDEMP---VRLRSVVSWNSIISAHSRACLNDEAI 118
D ++ + LI++Y KC F + KV D++P V + V WNSII + R +E +
Sbjct: 85 HSDQYITSSLINIYVKCGTFTDAVKVFDQLPKSGVSVDDVTIWNSIIDGYFRFGQLEEGM 144
Query: 119 LVLKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKF 178
+ M G +++G +H + + +LN + L +++ Y K
Sbjct: 145 VQFGRMQSSG----------------YKEGKQIHSYIVR-NMLNFDPFLETALIDTYFKC 187
Query: 179 GKVNEARSIFDEIGETS-IVSWTTIIGGYVNVG---NVNEAFGLCNQMRRMSVTPDLVVF 234
G+ EAR +F ++ + S IV+W +IGG+ G N E + L V+
Sbjct: 188 GRPTEARYLFKKLKDRSNIVAWNVMIGGFGENGLWENSLEYYLLAKTENVKVVSSSFTCT 247
Query: 235 LNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLE 294
L+ C Q + +H +K G+ ++ + L++MY KC +E A +VF+ V +
Sbjct: 248 LS---ACGQGEFVSFGKQVHCDAIKVGFEDDPYVHTSLLTMYGKCQMIESAEKVFNEVPD 304
Query: 295 KSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEI 354
K + LW ++I Y GY +A+ ++K++ +V + T+ L++ + G G+ I
Sbjct: 305 KEIELWNALISAYVGNGYAYDALRIYKQMKLCTVLSDSFTILNVLTSSSMAGLYDLGRLI 364
Query: 355 EEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMG 414
IV L+S+ +Q++L+ M+SK G N A +F + ++D+ W ++I+G+ +
Sbjct: 365 HTEIVKRPLQSSITIQSALLTMYSKFGDSNYANSIFSTMKERDVVAWGSVISGFCQNRKY 424
Query: 415 DQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYL 474
+AL+ F M+ + +KPD+ + SI+SAC+ VD G + + + G++ +
Sbjct: 425 KEALDFFRAME-ADLVKPDSDIMASIISACTGLEKVDLGCTIHGFVIKS-GLQLDVFVAS 482
Query: 475 CLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNV 518
L+D+ + G + A +MP++ W ++S C +N+
Sbjct: 483 SLLDMYSKFGFPERAGNIFSDMPLK-NLVAWNSIIS-CYCRNNL 524
>gi|357480925|ref|XP_003610748.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512083|gb|AES93706.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 828
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 212/653 (32%), Positives = 342/653 (52%), Gaps = 40/653 (6%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQT-GVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKV 59
+IR +G +E + Y M+ G+ ++FTFP +L AC+ I + +G +VH V+K+
Sbjct: 92 LIRGYAASGLCKEAIFIYLHMIIVMGIVPDNFTFPFLLSACSKIMAFSEGVQVHGVVVKM 151
Query: 60 GFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAIL 119
G +D FV LI Y+ C RKV DEM R+VVSW S+I+ +S + EA+
Sbjct: 152 GLVKDLFVANSLIHFYAACGKVDLGRKVFDEMLE--RNVVSWTSLINGYSVVNMAKEAVC 209
Query: 120 VLKEMWVLGLELSASTFVSVVSGCSFRQGISM--HCC--VYKLGLLNNEIPLANSVMSMY 175
+ EM +G+E + T V +S C+ + + + C + +LG+ +N + + N+++ MY
Sbjct: 210 LFFEMVEVGVEPNPVTMVCAISACAKLKDLELGKKVCNLMTELGVKSNTL-VVNALLDMY 268
Query: 176 AKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFL 235
K G + R IFDE + ++V + TI+ YV G E + ++M + PD V L
Sbjct: 269 MKCGDMYAVREIFDEFSDKNLVMYNTIMSNYVQHGLAGEVLVVLDEMLQKGQRPDKVTML 328
Query: 236 NLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEK 295
+ I CAQ+G+L + S H+ + ++G D + N ++ MY KCG E A +VFD++ K
Sbjct: 329 STIAACAQLGDLSVGKSSHAYVFRNGLERLDNISNAIIDMYMKCGKREAACKVFDSMSNK 388
Query: 296 SVFLWTS-------------------------------MIGGYAQLGYPSEAVNLFKRLL 324
+V W S MIG Q EA++L + +
Sbjct: 389 TVVTWNSLIAGLVRDGELELALRIFGEMPESNLVSWNTMIGAMVQASMFEEAIDLLREMQ 448
Query: 325 KTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRIN 384
++ + T+ SAC LG+L K I YI N + + Q+ T+L+ MFS+CG
Sbjct: 449 NQGIKGDRVTMVGIASACGYLGALDLAKWIYTYIEKNDIHIDMQLGTALVDMFSRCGDPL 508
Query: 385 KAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSAC 444
A VFE + +D++ W+A I A+ G A+ LF +M + +K D V+ ++L+A
Sbjct: 509 NAMRVFENMEKRDVSAWTAAIRVKAVEGNAKGAIELFDEMLK-QDVKADDFVFVALLTAF 567
Query: 445 SHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQV 504
SH G VD G F +M+ G+ P I HY C+VDLLGRAG + A + MP++ +
Sbjct: 568 SHGGYVDQGRQLFWAMEKIHGVSPQIVHYGCMVDLLGRAGLLEEAFDLMKSMPIKPNDVI 627
Query: 505 WAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDD 564
W L+AC KH NVE YA + + L P G ++L++N++ SAG W + A R M +
Sbjct: 628 WGSFLAACRKHKNVEFANYADEKITQLAPEKVGIHVLLSNIYASAGKWNDVARVRLQMKE 687
Query: 565 RRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKELHIKLLEAGYIAE 617
+ K G S +E+ G ++ F +GD SH + I L+E++ ++ + GY+ +
Sbjct: 688 KGFQKVAGSSSIEVHGLIREFTSGDESHTENAQIGLMLQEINCRISQVGYVPD 740
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 129/436 (29%), Positives = 226/436 (51%), Gaps = 39/436 (8%)
Query: 97 SVVSWNSIISAHSRACLNDEAILV-LKEMWVLGLELSASTFVSVVSGCS----FRQGISM 151
S+ + N++I ++ + L EAI + L + V+G+ TF ++S CS F +G+ +
Sbjct: 85 SLYTCNTLIRGYAASGLCKEAIFIYLHMIIVMGIVPDNFTFPFLLSACSKIMAFSEGVQV 144
Query: 152 HCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGN 211
H V K+GL+ ++ +ANS++ YA GKV+ R +FDE+ E ++VSWT++I GY V
Sbjct: 145 HGVVVKMGLVK-DLFVANSLIHFYAACGKVDLGRKVFDEMLERNVVSWTSLINGYSVVNM 203
Query: 212 VNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNL 271
EA L +M + V P+ V + I CA++ +L L + +L+ + G + + N
Sbjct: 204 AKEAVCLFFEMVEVGVEPNPVTMVCAISACAKLKDLELGKKVCNLMTELGVKSNTLVVNA 263
Query: 272 LVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPN 331
L+ MY KCGD+ R +FD +K++ ++ +++ Y Q G E + + +L+ RP+
Sbjct: 264 LLDMYMKCGDMYAVREIFDEFSDKNLVMYNTIMSNYVQHGLAGEVLVVLDEMLQKGQRPD 323
Query: 332 EATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFE 391
+ T+ +T++ACA+LG LS GK Y+ NGLE + ++I M+ KCG+ A +VF+
Sbjct: 324 KVTMLSTIAACAQLGDLSVGKSSHAYVFRNGLERLDNISNAIIDMYMKCGKREAACKVFD 383
Query: 392 RVPDKDLAVWSAMINGYAIHG-------------------------------MGDQALNL 420
+ +K + W+++I G G M ++A++L
Sbjct: 384 SMSNKTVVTWNSLIAGLVRDGELELALRIFGEMPESNLVSWNTMIGAMVQASMFEEAIDL 443
Query: 421 FYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLL 480
+MQ+ +G+K D V I SAC + G +D + ++ N I ++ LVD+
Sbjct: 444 LREMQN-QGIKGDRVTMVGIASACGYLGALDLAKWIYTYIEKN-DIHIDMQLGTALVDMF 501
Query: 481 GRAGRFDLALKTIHEM 496
R G A++ M
Sbjct: 502 SRCGDPLNAMRVFENM 517
>gi|449464596|ref|XP_004150015.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
gi|449529868|ref|XP_004171920.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 734
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 214/618 (34%), Positives = 332/618 (53%), Gaps = 41/618 (6%)
Query: 37 LKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDM--YSKCSDFVSSRKVLDEMPVR 94
LK + SI K++H+H++K G F + LI+ S+ D + + + +
Sbjct: 33 LKLLSKCQSIRTFKQIHAHIIKTGLHNTLFALSKLIEFSAVSRSGDISYAISLFNS--IE 90
Query: 95 LRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGC----SFRQGIS 150
++ WNS+I S + A++ M G+E ++ TF ++ C S +G
Sbjct: 91 EPNLFIWNSMIRGLSMSLSPALALVFFVRMIYSGVEPNSYTFPFLLKSCAKLASAHEGKQ 150
Query: 151 MHCCVYKLGLLNNEIPLANSVMSMYAKFGKVN---------------------------- 182
+H V KLG ++ ++ + S+++MYA+ G++N
Sbjct: 151 IHAHVLKLGFVS-DVFIHTSLINMYAQSGEMNNAQLVFDQSNFRDAISFTALIAGYALWG 209
Query: 183 ---EARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLIL 239
AR +FDE+ +VSW +I GY +G EA L MR+ +V P+ ++++
Sbjct: 210 YMDRARQLFDEMPVKDVVSWNAMIAGYAQMGRSKEALLLFEDMRKANVPPNESTIVSVLS 269
Query: 240 GCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFL 299
CAQ L L SM S + G + L N L+ MY+KCGDL+ AR +FD +LE+ V
Sbjct: 270 ACAQSNALDLGNSMRSWIEDRGLCSNLKLVNALIDMYSKCGDLQTARELFDDMLERDVIS 329
Query: 300 WTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIV 359
W MIGGY + EA+ LF+ +L + V P E T + L +CA LG++ GK I YI
Sbjct: 330 WNVMIGGYTHMCSYKEALALFREMLASGVEPTEITFLSILPSCAHLGAIDLGKWIHAYIN 389
Query: 360 LNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALN 419
N + + TSLI +++KCG I A++VF+ + K LA W+AMI G A+HG D+A
Sbjct: 390 KNFNSVSTSLSTSLIDLYAKCGNIVAARQVFDGMKIKSLASWNAMICGLAMHGQADKAFE 449
Query: 420 LFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDL 479
LF KM +G++P+ + + ILSAC H+G+VD G FF SM ++ I P +HY C++DL
Sbjct: 450 LFSKMSS-DGIEPNEITFVGILSACKHAGLVDLGQQFFSSMVQDYKISPKSQHYGCMIDL 508
Query: 480 LGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNY 539
LGRAG F+ A + M V+ +W LL AC H VELGE A+ L L P + G Y
Sbjct: 509 LGRAGLFEEAESLLQNMEVKPDGAIWGSLLGACRDHGRVELGELVAERLFELEPDNPGAY 568
Query: 540 ILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIR 599
+L++N++ AG W + A R ++DR + K PG + +E+D V F+ GD+ H S DI
Sbjct: 569 VLLSNIYAGAGKWDDVARIRTRLNDRGMKKVPGCTTIEVDNVVHEFLVGDKVHPQSEDIY 628
Query: 600 KTLKELHIKLLEAGYIAE 617
+ L+E+ +L G++A+
Sbjct: 629 RMLEEVDEQLKVFGFVAD 646
Score = 224 bits (572), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 148/489 (30%), Positives = 252/489 (51%), Gaps = 42/489 (8%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MIR + + S L + M+ +GV NS+TFP +LK+CA + S +GK++H+HVLK+G
Sbjct: 100 MIRGLSMSLSPALALVFFVRMIYSGVEPNSYTFPFLLKSCAKLASAHEGKQIHAHVLKLG 159
Query: 61 FQQDAFVQTGLIDMYSKCS---------------DFVS----------------SRKVLD 89
F D F+ T LI+MY++ D +S +R++ D
Sbjct: 160 FVSDVFIHTSLINMYAQSGEMNNAQLVFDQSNFRDAISFTALIAGYALWGYMDRARQLFD 219
Query: 90 EMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCS----F 145
EMPV+ VVSWN++I+ +++ + EA+L+ ++M + + ST VSV+S C+
Sbjct: 220 EMPVK--DVVSWNAMIAGYAQMGRSKEALLLFEDMRKANVPPNESTIVSVLSACAQSNAL 277
Query: 146 RQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGG 205
G SM + GL +N + L N+++ MY+K G + AR +FD++ E ++SW +IGG
Sbjct: 278 DLGNSMRSWIEDRGLCSN-LKLVNALIDMYSKCGDLQTARELFDDMLERDVISWNVMIGG 336
Query: 206 YVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNE 265
Y ++ + EA L +M V P + FL+++ CA +G + L +H+ + K+ +
Sbjct: 337 YTHMCSYKEALALFREMLASGVEPTEITFLSILPSCAHLGAIDLGKWIHAYINKNFNSVS 396
Query: 266 DPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLK 325
L L+ +Y KCG++ AR+VFD + KS+ W +MI G A G +A LF ++
Sbjct: 397 TSLSTSLIDLYAKCGNIVAARQVFDGMKIKSLASWNAMICGLAMHGQADKAFELFSKMSS 456
Query: 326 TSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLN-GLESNRQVQTSLIHMFSKCGRIN 384
+ PNE T LSAC G + G++ +V + + Q +I + + G
Sbjct: 457 DGIEPNEITFVGILSACKHAGLVDLGQQFFSSMVQDYKISPKSQHYGCMIDLLGRAGLFE 516
Query: 385 KAKEVFERVPDK-DLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSA 443
+A+ + + + K D A+W +++ HG + + ++ +E P A V S + A
Sbjct: 517 EAESLLQNMEVKPDGAIWGSLLGACRDHGRVELGELVAERLFELEPDNPGAYVLLSNIYA 576
Query: 444 CSHSGMVDD 452
+G DD
Sbjct: 577 --GAGKWDD 583
>gi|124360536|gb|ABN08546.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 1083
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 204/597 (34%), Positives = 337/597 (56%), Gaps = 13/597 (2%)
Query: 31 FTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDE 90
+TFP +LKAC S+ DGK+VH V K+GF+ D FV L+ +YS+ + KV +
Sbjct: 125 YTFPPILKACV---SLVDGKKVHCCVFKMGFEDDVFVAASLVHLYSRYGVLDVAHKVFVD 181
Query: 91 MPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCS----FR 146
MPV+ V SWN++IS + A+ VL M G+++ T S++ C+
Sbjct: 182 MPVK--DVGSWNAMISGFCQNGNAAGALGVLNRMKGEGVKMDTITVASILPVCAQSDDVI 239
Query: 147 QGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGY 206
G+ +H V K GL ++++ ++N++++MY+KFG++ +A+ +FD++ +VSW +II Y
Sbjct: 240 NGVLIHLHVLKHGL-DSDVFVSNALINMYSKFGRLQDAQMVFDQMEVRDLVSWNSIIAAY 298
Query: 207 VNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNED 266
+ + A M+ + PDL+ ++L +Q+ + ++ S+ +++ + ++D
Sbjct: 299 EQNNDPSTALRFFKGMQLGGIRPDLLTVVSLTSIFSQLSDQRISRSILGFVIRREWLDKD 358
Query: 267 P-LDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLK 325
+ N LV+MY K G + A VFD + K W +++ GY Q G SEA++ + + +
Sbjct: 359 VVIGNALVNMYAKLGYMNCAHTVFDQLPRKDTISWNTLVTGYTQNGLASEAIDAYNMMEE 418
Query: 326 T-SVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRIN 384
PN+ T + + A + +G+L +G +I ++ N L + V T LI ++ KCGR+
Sbjct: 419 CRDTIPNQGTWVSIIPAYSHVGALQQGMKIHAKLIKNSLYLDVFVATCLIDLYGKCGRLE 478
Query: 385 KAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSAC 444
A +F +P W+A+I IHG G++AL LF M E +K D + + S+LSAC
Sbjct: 479 DAMSLFYEIPRDTSVPWNAIIASLGIHGRGEEALQLFKDML-AERVKADHITFVSLLSAC 537
Query: 445 SHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQV 504
SHSG+VD+G F MQ +GI+PS++HY C+VDLLGRAG + A + + MP++ A +
Sbjct: 538 SHSGLVDEGQKCFDIMQKEYGIKPSLKHYGCMVDLLGRAGYLEKAYELVRNMPIQPDASI 597
Query: 505 WAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDD 564
W LLSAC + N ELG A+ LL ++ + G Y+L++N++ + W+ R L D
Sbjct: 598 WGALLSACKIYGNAELGTLASDRLLEVDSENVGYYVLLSNIYANTEKWEGVIKVRSLARD 657
Query: 565 RRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKELHIKLLEAGYIAEADIV 621
R L K PGWS V + +VF G+++H +I K LK L K+ GY+ + V
Sbjct: 658 RGLRKTPGWSSVVVGSKAEVFYTGNQTHPKYTEIYKELKVLSAKMKSLGYVPDYSFV 714
Score = 221 bits (564), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 138/526 (26%), Positives = 271/526 (51%), Gaps = 15/526 (2%)
Query: 10 SFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQT 69
S +++S + T +H ++ F + +C N+N+ K++H+ +L G Q+ + T
Sbjct: 3 SLLKSVSKFYKSATTSLHKDA-DFNALFNSCVNVNAT---KKLHALLLVFGKSQNIVLST 58
Query: 70 GLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVL-- 127
LI++Y D SR D + +++ SWNSIISA+ R EA+ + +++ +
Sbjct: 59 KLINLYVTHGDISLSRSTFDY--IHKKNIFSWNSIISAYVRFGKYHEAMNCVNQLFSMCG 116
Query: 128 --GLELSASTFVSVVSGC-SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEA 184
L TF ++ C S G +HCCV+K+G +++ +A S++ +Y+++G ++ A
Sbjct: 117 GGHLRPDFYTFPPILKACVSLVDGKKVHCCVFKMG-FEDDVFVAASLVHLYSRYGVLDVA 175
Query: 185 RSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQV 244
+F ++ + SW +I G+ GN A G+ N+M+ V D + +++ CAQ
Sbjct: 176 HKVFVDMPVKDVGSWNAMISGFCQNGNAAGALGVLNRMKGEGVKMDTITVASILPVCAQS 235
Query: 245 GNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMI 304
++ + +H +LK G +++ + N L++MY+K G L+ A+ VFD + + + W S+I
Sbjct: 236 DDVINGVLIHLHVLKHGLDSDVFVSNALINMYSKFGRLQDAQMVFDQMEVRDLVSWNSII 295
Query: 305 GGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNG-L 363
Y Q PS A+ FK + +RP+ T+ + S ++L + I +++ L
Sbjct: 296 AAYEQNNDPSTALRFFKGMQLGGIRPDLLTVVSLTSIFSQLSDQRISRSILGFVIRREWL 355
Query: 364 ESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYK 423
+ + + +L++M++K G +N A VF+++P KD W+ ++ GY +G+ +A++ +
Sbjct: 356 DKDVVIGNALVNMYAKLGYMNCAHTVFDQLPRKDTISWNTLVTGYTQNGLASEAIDAYNM 415
Query: 424 MQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRA 483
M+ P+ + SI+ A SH G + G+ + N + + CL+DL G+
Sbjct: 416 MEECRDTIPNQGTWVSIIPAYSHVGALQQGMKIHAKLIKN-SLYLDVFVATCLIDLYGKC 474
Query: 484 GRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLL 529
GR + A+ +E+P + W ++++ H E K++L
Sbjct: 475 GRLEDAMSLFYEIPRDTSVP-WNAIIASLGIHGRGEEALQLFKDML 519
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 122/423 (28%), Positives = 210/423 (49%), Gaps = 17/423 (4%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI NG+ L + M GV ++ T +L CA + + +G +H HVLK G
Sbjct: 193 MISGFCQNGNAAGALGVLNRMKGEGVKMDTITVASILPVCAQSDDVINGVLIHLHVLKHG 252
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
D FV LI+MYSK ++ V D+M V R +VSWNSII+A+ + A+
Sbjct: 253 LDSDVFVSNALINMYSKFGRLQDAQMVFDQMEV--RDLVSWNSIIAAYEQNNDPSTALRF 310
Query: 121 LKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
K M + G+ T VS+ S S R S+ V + L+ ++ + N++++MYA
Sbjct: 311 FKGMQLGGIRPDLLTVVSLTSIFSQLSDQRISRSILGFVIRREWLDKDVVIGNALVNMYA 370
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVT-PDLVVFL 235
K G +N A ++FD++ +SW T++ GY G +EA N M T P+ ++
Sbjct: 371 KLGYMNCAHTVFDQLPRKDTISWNTLVTGYTQNGLASEAIDAYNMMEECRDTIPNQGTWV 430
Query: 236 NLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEK 295
++I + VG L + +H+ L+K+ + + L+ +Y KCG LE A +F +
Sbjct: 431 SIIPAYSHVGALQQGMKIHAKLIKNSLYLDVFVATCLIDLYGKCGRLEDAMSLFYEIPRD 490
Query: 296 SVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEI- 354
+ W ++I G EA+ LFK +L V+ + T + LSAC+ G + +G++
Sbjct: 491 TSVPWNAIIASLGIHGRGEEALQLFKDMLAERVKADHITFVSLLSACSHSGLVDEGQKCF 550
Query: 355 ----EEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVP-DKDLAVWSAMINGYA 409
+EY G++ + + ++ + + G + KA E+ +P D ++W A+++
Sbjct: 551 DIMQKEY----GIKPSLKHYGCMVDLLGRAGYLEKAYELVRNMPIQPDASIWGALLSACK 606
Query: 410 IHG 412
I+G
Sbjct: 607 IYG 609
>gi|356542011|ref|XP_003539465.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Glycine max]
Length = 876
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 203/603 (33%), Positives = 337/603 (55%), Gaps = 14/603 (2%)
Query: 25 GVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSS 84
G + +T V+ A AN ++ G ++H+ V+K+GF+ + V LI M SK +
Sbjct: 198 GYRPDYYTVSTVIAALANQGAVAIGMQIHALVVKLGFETERLVCNSLISMLSKSGMLRDA 257
Query: 85 RKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCS 144
R V D M + VSWNS+I+ H + EA M + G + + +TF SV+ C+
Sbjct: 258 RVVFDNMENK--DSVSWNSMIAGHVINGQDLEAFETFNNMQLAGAKPTHATFASVIKSCA 315
Query: 145 FRQGISM----HCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEI-GETSIVSW 199
+ + + HC K GL N+ L ++M K ++++A S+F + G S+VSW
Sbjct: 316 SLKELGLVRVLHCKTLKSGLSTNQNVLT-ALMVALTKCKEIDDAFSLFSLMHGVQSVVSW 374
Query: 200 TTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLK 259
T +I GY+ G+ ++A L + MRR V P+ + ++ V + +H+ ++K
Sbjct: 375 TAMISGYLQNGDTDQAVNLFSLMRREGVKPNHFTYSTIL----TVQHAVFISEIHAEVIK 430
Query: 260 SGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNL 319
+ Y + L+ + K G++ A +VF+ + K V W++M+ GYAQ G EA +
Sbjct: 431 TNYEKSSSVGTALLDAFVKIGNISDAVKVFELIETKDVIAWSAMLAGYAQAGETEEAAKI 490
Query: 320 FKRLLKTSVRPNEATLATTLSAC-AELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFS 378
F +L + ++PNE T + ++AC A S+ +GK+ Y + L + V +SL+ +++
Sbjct: 491 FHQLTREGIKPNEFTFCSIINACTAPTASVEQGKQFHAYAIKLRLNNALCVSSSLVTLYA 550
Query: 379 KCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYT 438
K G I A E+F+R ++DL W++MI+GYA HG +AL +F +MQ L+ DA+ +
Sbjct: 551 KRGNIESAHEIFKRQKERDLVSWNSMISGYAQHGQAKKALEVFEEMQK-RNLEVDAITFI 609
Query: 439 SILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPV 498
++SAC+H+G+V G ++F M ++ I P++EHY C++DL RAG A+ I+ MP
Sbjct: 610 GVISACAHAGLVGKGQNYFNIMINDHHINPTMEHYSCMIDLYSRAGMLGKAMDIINGMPF 669
Query: 499 EVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATA 558
A VW +L+A H N+ELG+ AA+ +++L P + Y+L++N++ +AG W E
Sbjct: 670 PPAATVWRIVLAASRVHRNIELGKLAAEKIISLEPQHSAAYVLLSNIYAAAGNWHEKVNV 729
Query: 559 RGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKELHIKLLEAGYIAEA 618
R LMD RR+ KEPG+S +E+ F+AGD SH LS I L EL+ +L + GY +
Sbjct: 730 RKLMDKRRVKKEPGYSWIEVKNKTYSFLAGDLSHPLSDHIYSKLSELNTRLRDVGYQPDT 789
Query: 619 DIV 621
+ V
Sbjct: 790 NYV 792
Score = 224 bits (571), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 162/515 (31%), Positives = 261/515 (50%), Gaps = 26/515 (5%)
Query: 12 EETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGL 71
+E L + S+ ++G+ +S+T VL CA + G++VH +K G V L
Sbjct: 84 QEALHLFVSLYRSGLSPDSYTMSCVLSVCAGSFNGTVGEQVHCQCVKCGLVHHLSVGNSL 143
Query: 72 IDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLEL 131
+DMY+K + R+V DEM R VVSWNS+++ +S ND+ + M V G
Sbjct: 144 VDMYTKTGNVRDGRRVFDEMGD--RDVVSWNSLLTGYSWNRFNDQVWELFCLMQVEGYRP 201
Query: 132 SASTFVSVVSGCSFRQ----GISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSI 187
T +V++ + + G+ +H V KLG E + NS++SM +K G + +AR +
Sbjct: 202 DYYTVSTVIAALANQGAVAIGMQIHALVVKLG-FETERLVCNSLISMLSKSGMLRDARVV 260
Query: 188 FDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNL 247
FD + VSW ++I G+V G EAF N M+ P F ++I CA + L
Sbjct: 261 FDNMENKDSVSWNSMIAGHVINGQDLEAFETFNNMQLAGAKPTHATFASVIKSCASLKEL 320
Query: 248 FLALSMHSLLLKSGYN-NEDPLDNLLVSMYTKCGDLELARRVFDAVLE-KSVFLWTSMIG 305
L +H LKSG + N++ L L+V++ TKC +++ A +F + +SV WT+MI
Sbjct: 321 GLVRVLHCKTLKSGLSTNQNVLTALMVAL-TKCKEIDDAFSLFSLMHGVQSVVSWTAMIS 379
Query: 306 GYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLES 365
GY Q G +AVNLF + + V+PN T +T L+ + EI ++ E
Sbjct: 380 GYLQNGDTDQAVNLFSLMRREGVKPNHFTYSTILTVQHAVFI----SEIHAEVIKTNYEK 435
Query: 366 NRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQ 425
+ V T+L+ F K G I+ A +VFE + KD+ WSAM+ GYA G ++A +F+++
Sbjct: 436 SSSVGTALLDAFVKIGNISDAVKVFELIETKDVIAWSAMLAGYAQAGETEEAAKIFHQLT 495
Query: 426 HVEGLKPDAVVYTSILSACSH-SGMVDDGLSFFKSMQSNFGIEPSIEHYLC----LVDLL 480
EG+KP+ + SI++AC+ + V+ G F + I+ + + LC LV L
Sbjct: 496 R-EGIKPNEFTFCSIINACTAPTASVEQGKQFHA-----YAIKLRLNNALCVSSSLVTLY 549
Query: 481 GRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKH 515
+ G + A I + E W ++S +H
Sbjct: 550 AKRGNIESA-HEIFKRQKERDLVSWNSMISGYAQH 583
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 125/422 (29%), Positives = 214/422 (50%), Gaps = 20/422 (4%)
Query: 32 TFPLVLKACANI--NSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKC----SDFVSSR 85
T + L+A N N I +R H + +Q+ ++ + ++ SD ++
Sbjct: 2 TLNMTLRALTNTSTNPILRIRRYQLHC-----HANPLLQSHVVALNARTLLRDSDPRFAQ 56
Query: 86 KVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGC-- 143
++ D+ P LR + N ++ +SR EA+ + ++ GL + T V+S C
Sbjct: 57 QLFDQTP--LRDLKQHNQLLFRYSRCDQTQEALHLFVSLYRSGLSPDSYTMSCVLSVCAG 114
Query: 144 SFRQ--GISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTT 201
SF G +HC K GL+++ + + NS++ MY K G V + R +FDE+G+ +VSW +
Sbjct: 115 SFNGTVGEQVHCQCVKCGLVHH-LSVGNSLVDMYTKTGNVRDGRRVFDEMGDRDVVSWNS 173
Query: 202 IIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSG 261
++ GY ++ + L M+ PD +I A G + + + +H+L++K G
Sbjct: 174 LLTGYSWNRFNDQVWELFCLMQVEGYRPDYYTVSTVIAALANQGAVAIGMQIHALVVKLG 233
Query: 262 YNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFK 321
+ E + N L+SM +K G L AR VFD + K W SMI G+ G EA F
Sbjct: 234 FETERLVCNSLISMLSKSGMLRDARVVFDNMENKDSVSWNSMIAGHVINGQDLEAFETFN 293
Query: 322 RLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCG 381
+ +P AT A+ + +CA L L + + + +GL +N+ V T+L+ +KC
Sbjct: 294 NMQLAGAKPTHATFASVIKSCASLKELGLVRVLHCKTLKSGLSTNQNVLTALMVALTKCK 353
Query: 382 RINKAKEVFERVPD-KDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSI 440
I+ A +F + + + W+AMI+GY +G DQA+NLF M+ EG+KP+ Y++I
Sbjct: 354 EIDDAFSLFSLMHGVQSVVSWTAMISGYLQNGDTDQAVNLFSLMRR-EGVKPNHFTYSTI 412
Query: 441 LS 442
L+
Sbjct: 413 LT 414
Score = 148 bits (374), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 103/415 (24%), Positives = 201/415 (48%), Gaps = 7/415 (1%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI NG E T+++M G TF V+K+CA++ + + +H LK G
Sbjct: 275 MIAGHVINGQDLEAFETFNNMQLAGAKPTHATFASVIKSCASLKELGLVRVLHCKTLKSG 334
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+ V T L+ +KC + + + M ++SVVSW ++IS + + D+A+ +
Sbjct: 335 LSTNQNVLTALMVALTKCKEIDDAFSLFSLMH-GVQSVVSWTAMISGYLQNGDTDQAVNL 393
Query: 121 LKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGK 180
M G++ + T+ ++++ +H V K + + +++ + K G
Sbjct: 394 FSLMRREGVKPNHFTYSTILTVQHAVFISEIHAEVIKTNYEKSS-SVGTALLDAFVKIGN 452
Query: 181 VNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILG 240
+++A +F+ I +++W+ ++ GY G EA + +Q+ R + P+ F ++I
Sbjct: 453 ISDAVKVFELIETKDVIAWSAMLAGYAQAGETEEAAKIFHQLTREGIKPNEFTFCSIINA 512
Query: 241 C-AQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFL 299
C A ++ H+ +K NN + + LV++Y K G++E A +F E+ +
Sbjct: 513 CTAPTASVEQGKQFHAYAIKLRLNNALCVSSSLVTLYAKRGNIESAHEIFKRQKERDLVS 572
Query: 300 WTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIV 359
W SMI GYAQ G +A+ +F+ + K ++ + T +SACA G + KG+ I+
Sbjct: 573 WNSMISGYAQHGQAKKALEVFEEMQKRNLEVDAITFIGVISACAHAGLVGKGQNYFN-IM 631
Query: 360 LNGLESNRQVQ--TSLIHMFSKCGRINKAKEVFERVPDKDLA-VWSAMINGYAIH 411
+N N ++ + +I ++S+ G + KA ++ +P A VW ++ +H
Sbjct: 632 INDHHINPTMEHYSCMIDLYSRAGMLGKAMDIINGMPFPPAATVWRIVLAASRVH 686
Score = 128 bits (321), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 77/262 (29%), Positives = 131/262 (50%), Gaps = 1/262 (0%)
Query: 184 ARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQ 243
A+ +FD+ + ++ Y EA L + R ++PD ++ CA
Sbjct: 55 AQQLFDQTPLRDLKQHNQLLFRYSRCDQTQEALHLFVSLYRSGLSPDSYTMSCVLSVCAG 114
Query: 244 VGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSM 303
N + +H +K G + + N LV MYTK G++ RRVFD + ++ V W S+
Sbjct: 115 SFNGTVGEQVHCQCVKCGLVHHLSVGNSLVDMYTKTGNVRDGRRVFDEMGDRDVVSWNSL 174
Query: 304 IGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGL 363
+ GY+ + + LF + RP+ T++T ++A A G+++ G +I +V G
Sbjct: 175 LTGYSWNRFNDQVWELFCLMQVEGYRPDYYTVSTVIAALANQGAVAIGMQIHALVVKLGF 234
Query: 364 ESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYK 423
E+ R V SLI M SK G + A+ VF+ + +KD W++MI G+ I+G +A F
Sbjct: 235 ETERLVCNSLISMLSKSGMLRDARVVFDNMENKDSVSWNSMIAGHVINGQDLEAFETFNN 294
Query: 424 MQHVEGLKPDAVVYTSILSACS 445
MQ + G KP + S++ +C+
Sbjct: 295 MQ-LAGAKPTHATFASVIKSCA 315
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 109/206 (52%), Gaps = 6/206 (2%)
Query: 281 DLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLS 340
D A+++FD + + ++ Y++ EA++LF L ++ + P+ T++ LS
Sbjct: 51 DPRFAQQLFDQTPLRDLKQHNQLLFRYSRCDQTQEALHLFVSLYRSGLSPDSYTMSCVLS 110
Query: 341 ACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAV 400
CA + + G+++ V GL + V SL+ M++K G + + VF+ + D+D+
Sbjct: 111 VCAGSFNGTVGEQVHCQCVKCGLVHHLSVGNSLVDMYTKTGNVRDGRRVFDEMGDRDVVS 170
Query: 401 WSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSM 460
W++++ GY+ + DQ LF MQ VEG +PD +++++A ++ G V G+ ++
Sbjct: 171 WNSLLTGYSWNRFNDQVWELFCLMQ-VEGYRPDYYTVSTVIAALANQGAVAIGMQ-IHAL 228
Query: 461 QSNFGIEPSIEHYLC--LVDLLGRAG 484
G E E +C L+ +L ++G
Sbjct: 229 VVKLGFE--TERLVCNSLISMLSKSG 252
>gi|302767396|ref|XP_002967118.1| hypothetical protein SELMODRAFT_87370 [Selaginella moellendorffii]
gi|300165109|gb|EFJ31717.1| hypothetical protein SELMODRAFT_87370 [Selaginella moellendorffii]
Length = 903
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 214/629 (34%), Positives = 337/629 (53%), Gaps = 17/629 (2%)
Query: 2 IRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGF 61
I + +G + L + M GV T + L CA I + +HS V + G
Sbjct: 200 IAANAQSGDLDMALELFQRMQLEGVRPARITLVITLSVCAKIR---QARAIHSIVRESGL 256
Query: 62 QQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVL 121
+Q V T L Y++ +++V D R VVSWN+++ A+++ EA L+
Sbjct: 257 EQTLVVSTALASAYARLGHLDQAKEVFDRAAER--DVVSWNAMLGAYAQHGHMSEAALLF 314
Query: 122 KEMWVLGLELSASTFVSVVSGCS-FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGK 180
M G+ S T V+ +GCS R G +H C + GL + +I L N+++ MY + G
Sbjct: 315 ARMLHEGIPPSKVTLVNASTGCSSLRFGRMIHACALEKGL-DRDIVLGNALLDMYTRCGS 373
Query: 181 VNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILG 240
EAR +F+ I + VSW T+I G G + A L +M+ + P +LNL+
Sbjct: 374 PEEARHLFEGI-PGNAVSWNTMIAGSSQKGQMKRALELFQRMQLEGMAPVRATYLNLLEA 432
Query: 241 CAQVGNLFLALS----MHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFD-AVLEK 295
A A++ +HS ++ GY +E + +V MY CG ++ A F +E
Sbjct: 433 VASNPEEARAMAEGRKLHSRIVSCGYASEPAIGTAVVKMYASCGAIDEAAASFQRGAMED 492
Query: 296 --SVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKE 353
V W ++I +Q G+ A+ F+R+ V PN+ T L ACA +L++G
Sbjct: 493 RHDVVSWNAIISSLSQHGHGKRALGFFRRMDLHGVAPNQITCVAVLDACAGAAALTEGVI 552
Query: 354 IEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVP-DKDLAVWSAMINGYAIHG 412
+ +++ +G+ESN V T+L M+ +CG + A+E+FE+V ++D+ +++AMI Y+ +G
Sbjct: 553 VHDHLRHSGMESNVFVATALASMYGRCGSLESAREIFEKVAVERDVVIFNAMIAAYSQNG 612
Query: 413 MGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEH 472
+ +AL LF++MQ EG +PD + S+LSACSH G+ D+G F+SM+ ++GI PS +H
Sbjct: 613 LAGEALKLFWRMQQ-EGSRPDEQSFVSVLSACSHGGLADEGWEIFRSMRQSYGIAPSEDH 671
Query: 473 YLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLN 532
Y C VD+LGRAG A + I M V+ VW LL AC K+ +V+ G A + L+
Sbjct: 672 YACAVDVLGRAGWLADAEELIRCMDVKPTVLVWKTLLGACRKYRDVDRGRLANSMVRELD 731
Query: 533 PGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSH 592
PG Y++++N+ AG W EAA R M+ R L K+ G S +EI V FVAGDRSH
Sbjct: 732 PGDESAYVVLSNILAGAGKWDEAAEVRTEMESRGLRKQAGKSWIEIKSRVHEFVAGDRSH 791
Query: 593 HLSVDIRKTLKELHIKLLEAGYIAEADIV 621
S +I + L+ LH ++ E GY+ + +V
Sbjct: 792 PRSEEIYRELERLHAEIREIGYVPDTRLV 820
Score = 232 bits (592), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 142/519 (27%), Positives = 274/519 (52%), Gaps = 18/519 (3%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+I T +G + + + M Q GV ++ TF VLKACA + + G+ +H+ +++ G
Sbjct: 99 IITAYTEHGQAKRAIWMFHRMQQEGVRCDAVTFLAVLKACARLGDLSQGRSIHAWIVESG 158
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+ + + L+ +Y C S+ + + M R +VSWN+ I+A++++ D A+ +
Sbjct: 159 LEGKSVLANLLLHIYGSCGCVASAMLLFERME---RDLVSWNAAIAANAQSGDLDMALEL 215
Query: 121 LKEMWVLGLELSASTFVSVVSGCS-FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFG 179
+ M + G+ + T V +S C+ RQ ++H V + G L + ++ ++ S YA+ G
Sbjct: 216 FQRMQLEGVRPARITLVITLSVCAKIRQARAIHSIVRESG-LEQTLVVSTALASAYARLG 274
Query: 180 KVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLIL 239
+++A+ +FD E +VSW ++G Y G+++EA L +M + P V +N
Sbjct: 275 HLDQAKEVFDRAAERDVVSWNAMLGAYAQHGHMSEAALLFARMLHEGIPPSKVTLVNAST 334
Query: 240 GCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFL 299
GC+ +L +H+ L+ G + + L N L+ MYT+CG E AR +F+ + +V
Sbjct: 335 GCS---SLRFGRMIHACALEKGLDRDIVLGNALLDMYTRCGSPEEARHLFEGIPGNAVS- 390
Query: 300 WTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACA----ELGSLSKGKEIE 355
W +MI G +Q G A+ LF+R+ + P AT L A A E ++++G+++
Sbjct: 391 WNTMIAGSSQKGQMKRALELFQRMQLEGMAPVRATYLNLLEAVASNPEEARAMAEGRKLH 450
Query: 356 EYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFER--VPDK-DLAVWSAMINGYAIHG 412
IV G S + T+++ M++ CG I++A F+R + D+ D+ W+A+I+ + HG
Sbjct: 451 SRIVSCGYASEPAIGTAVVKMYASCGAIDEAAASFQRGAMEDRHDVVSWNAIISSLSQHG 510
Query: 413 MGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEH 472
G +AL F +M + G+ P+ + ++L AC+ + + +G+ ++ + G+E ++
Sbjct: 511 HGKRALGFFRRMD-LHGVAPNQITCVAVLDACAGAAALTEGVIVHDHLRHS-GMESNVFV 568
Query: 473 YLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSA 511
L + GR G + A + ++ VE ++ +++A
Sbjct: 569 ATALASMYGRCGSLESAREIFEKVAVERDVVIFNAMIAA 607
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 132/491 (26%), Positives = 241/491 (49%), Gaps = 27/491 (5%)
Query: 36 VLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRL 95
+L+A + + G+R+H+ ++ +G +++ + L+ +Y KC +V + VR
Sbjct: 35 LLRAAGDDRLLSQGRRIHARIVSLGLEEE--LGNHLLRLYLKCESLGDVEEVFSRLEVR- 91
Query: 96 RSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCS----FRQGISM 151
SW +II+A++ AI + M G+ A TF++V+ C+ QG S+
Sbjct: 92 -DEASWTTIITAYTEHGQAKRAIWMFHRMQQEGVRCDAVTFLAVLKACARLGDLSQGRSI 150
Query: 152 HCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGN 211
H + + GL + LAN ++ +Y G V A +F+ + E +VSW I G+
Sbjct: 151 HAWIVESGLEGKSV-LANLLLHIYGSCGCVASAMLLFERM-ERDLVSWNAAIAANAQSGD 208
Query: 212 VNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNL 271
++ A L +M+ V P + + + CA++ A ++HS++ +SG +
Sbjct: 209 LDMALELFQRMQLEGVRPARITLVITLSVCAKIRQ---ARAIHSIVRESGLEQTLVVSTA 265
Query: 272 LVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPN 331
L S Y + G L+ A+ VFD E+ V W +M+G YAQ G+ SEA LF R+L + P+
Sbjct: 266 LASAYARLGHLDQAKEVFDRAAERDVVSWNAMLGAYAQHGHMSEAALLFARMLHEGIPPS 325
Query: 332 EATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFE 391
+ TL + C+ SL G+ I + GL+ + + +L+ M+++CG +A+ +FE
Sbjct: 326 KVTLVNASTGCS---SLRFGRMIHACALEKGLDRDIVLGNALLDMYTRCGSPEEARHLFE 382
Query: 392 RVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVD 451
+P ++ W+ MI G + G +AL LF +MQ +EG+ P Y ++L A + +
Sbjct: 383 GIPGNAVS-WNTMIAGSSQKGQMKRALELFQRMQ-LEGMAPVRATYLNLLEAVASNPEEA 440
Query: 452 DGLSFFKSMQSN-----FGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQV-- 504
++ + + S + EP+I +V + G D A + +E + V
Sbjct: 441 RAMAEGRKLHSRIVSCGYASEPAIG--TAVVKMYASCGAIDEAAASFQRGAMEDRHDVVS 498
Query: 505 WAPLLSACMKH 515
W ++S+ +H
Sbjct: 499 WNAIISSLSQH 509
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 76/144 (52%), Gaps = 1/144 (0%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+I + + +G + L + M GV N T VL ACA ++ +G VH H+ G
Sbjct: 502 IISSLSQHGHGKRALGFFRRMDLHGVAPNQITCVAVLDACAGAAALTEGVIVHDHLRHSG 561
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+ + FV T L MY +C S+R++ +++ V R VV +N++I+A+S+ L EA+ +
Sbjct: 562 MESNVFVATALASMYGRCGSLESAREIFEKVAVE-RDVVIFNAMIAAYSQNGLAGEALKL 620
Query: 121 LKEMWVLGLELSASTFVSVVSGCS 144
M G +FVSV+S CS
Sbjct: 621 FWRMQQEGSRPDEQSFVSVLSACS 644
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 71/130 (54%), Gaps = 5/130 (3%)
Query: 327 SVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKA 386
+ RP A L L A + LS+G+ I IV GLE ++ L+ ++ KC +
Sbjct: 26 ATRP--AHLVRLLRAAGDDRLLSQGRRIHARIVSLGLEE--ELGNHLLRLYLKCESLGDV 81
Query: 387 KEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSH 446
+EVF R+ +D A W+ +I Y HG +A+ +F++MQ EG++ DAV + ++L AC+
Sbjct: 82 EEVFSRLEVRDEASWTTIITAYTEHGQAKRAIWMFHRMQQ-EGVRCDAVTFLAVLKACAR 140
Query: 447 SGMVDDGLSF 456
G + G S
Sbjct: 141 LGDLSQGRSI 150
>gi|357509307|ref|XP_003624942.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355499957|gb|AES81160.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1092
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 204/597 (34%), Positives = 337/597 (56%), Gaps = 13/597 (2%)
Query: 31 FTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDE 90
+TFP +LKAC S+ DGK+VH V K+GF+ D FV L+ +YS+ + KV +
Sbjct: 125 YTFPPILKACV---SLVDGKKVHCCVFKMGFEDDVFVAASLVHLYSRYGVLDVAHKVFVD 181
Query: 91 MPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCS----FR 146
MPV+ V SWN++IS + A+ VL M G+++ T S++ C+
Sbjct: 182 MPVK--DVGSWNAMISGFCQNGNAAGALGVLNRMKGEGVKMDTITVASILPVCAQSDDVI 239
Query: 147 QGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGY 206
G+ +H V K GL ++++ ++N++++MY+KFG++ +A+ +FD++ +VSW +II Y
Sbjct: 240 NGVLIHLHVLKHGL-DSDVFVSNALINMYSKFGRLQDAQMVFDQMEVRDLVSWNSIIAAY 298
Query: 207 VNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNED 266
+ + A M+ + PDL+ ++L +Q+ + ++ S+ +++ + ++D
Sbjct: 299 EQNNDPSTALRFFKGMQLGGIRPDLLTVVSLTSIFSQLSDQRISRSILGFVIRREWLDKD 358
Query: 267 P-LDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLK 325
+ N LV+MY K G + A VFD + K W +++ GY Q G SEA++ + + +
Sbjct: 359 VVIGNALVNMYAKLGYMNCAHTVFDQLPRKDTISWNTLVTGYTQNGLASEAIDAYNMMEE 418
Query: 326 T-SVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRIN 384
PN+ T + + A + +G+L +G +I ++ N L + V T LI ++ KCGR+
Sbjct: 419 CRDTIPNQGTWVSIIPAYSHVGALQQGMKIHAKLIKNSLYLDVFVATCLIDLYGKCGRLE 478
Query: 385 KAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSAC 444
A +F +P W+A+I IHG G++AL LF M E +K D + + S+LSAC
Sbjct: 479 DAMSLFYEIPRDTSVPWNAIIASLGIHGRGEEALQLFKDML-AERVKADHITFVSLLSAC 537
Query: 445 SHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQV 504
SHSG+VD+G F MQ +GI+PS++HY C+VDLLGRAG + A + + MP++ A +
Sbjct: 538 SHSGLVDEGQKCFDIMQKEYGIKPSLKHYGCMVDLLGRAGYLEKAYELVRNMPIQPDASI 597
Query: 505 WAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDD 564
W LLSAC + N ELG A+ LL ++ + G Y+L++N++ + W+ R L D
Sbjct: 598 WGALLSACKIYGNAELGTLASDRLLEVDSENVGYYVLLSNIYANTEKWEGVIKVRSLARD 657
Query: 565 RRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKELHIKLLEAGYIAEADIV 621
R L K PGWS V + +VF G+++H +I K LK L K+ GY+ + V
Sbjct: 658 RGLRKTPGWSSVVVGSKAEVFYTGNQTHPKYTEIYKELKVLSAKMKSLGYVPDYSFV 714
Score = 221 bits (564), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 138/526 (26%), Positives = 271/526 (51%), Gaps = 15/526 (2%)
Query: 10 SFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQT 69
S +++S + T +H ++ F + +C N+N+ K++H+ +L G Q+ + T
Sbjct: 3 SLLKSVSKFYKSATTSLHKDA-DFNALFNSCVNVNAT---KKLHALLLVFGKSQNIVLST 58
Query: 70 GLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVL-- 127
LI++Y D SR D + +++ SWNSIISA+ R EA+ + +++ +
Sbjct: 59 KLINLYVTHGDISLSRSTFDY--IHKKNIFSWNSIISAYVRFGKYHEAMNCVNQLFSMCG 116
Query: 128 --GLELSASTFVSVVSGC-SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEA 184
L TF ++ C S G +HCCV+K+G +++ +A S++ +Y+++G ++ A
Sbjct: 117 GGHLRPDFYTFPPILKACVSLVDGKKVHCCVFKMG-FEDDVFVAASLVHLYSRYGVLDVA 175
Query: 185 RSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQV 244
+F ++ + SW +I G+ GN A G+ N+M+ V D + +++ CAQ
Sbjct: 176 HKVFVDMPVKDVGSWNAMISGFCQNGNAAGALGVLNRMKGEGVKMDTITVASILPVCAQS 235
Query: 245 GNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMI 304
++ + +H +LK G +++ + N L++MY+K G L+ A+ VFD + + + W S+I
Sbjct: 236 DDVINGVLIHLHVLKHGLDSDVFVSNALINMYSKFGRLQDAQMVFDQMEVRDLVSWNSII 295
Query: 305 GGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNG-L 363
Y Q PS A+ FK + +RP+ T+ + S ++L + I +++ L
Sbjct: 296 AAYEQNNDPSTALRFFKGMQLGGIRPDLLTVVSLTSIFSQLSDQRISRSILGFVIRREWL 355
Query: 364 ESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYK 423
+ + + +L++M++K G +N A VF+++P KD W+ ++ GY +G+ +A++ +
Sbjct: 356 DKDVVIGNALVNMYAKLGYMNCAHTVFDQLPRKDTISWNTLVTGYTQNGLASEAIDAYNM 415
Query: 424 MQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRA 483
M+ P+ + SI+ A SH G + G+ + N + + CL+DL G+
Sbjct: 416 MEECRDTIPNQGTWVSIIPAYSHVGALQQGMKIHAKLIKN-SLYLDVFVATCLIDLYGKC 474
Query: 484 GRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLL 529
GR + A+ +E+P + W ++++ H E K++L
Sbjct: 475 GRLEDAMSLFYEIPRDTSVP-WNAIIASLGIHGRGEEALQLFKDML 519
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 122/423 (28%), Positives = 210/423 (49%), Gaps = 17/423 (4%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI NG+ L + M GV ++ T +L CA + + +G +H HVLK G
Sbjct: 193 MISGFCQNGNAAGALGVLNRMKGEGVKMDTITVASILPVCAQSDDVINGVLIHLHVLKHG 252
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
D FV LI+MYSK ++ V D+M V R +VSWNSII+A+ + A+
Sbjct: 253 LDSDVFVSNALINMYSKFGRLQDAQMVFDQMEV--RDLVSWNSIIAAYEQNNDPSTALRF 310
Query: 121 LKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
K M + G+ T VS+ S S R S+ V + L+ ++ + N++++MYA
Sbjct: 311 FKGMQLGGIRPDLLTVVSLTSIFSQLSDQRISRSILGFVIRREWLDKDVVIGNALVNMYA 370
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVT-PDLVVFL 235
K G +N A ++FD++ +SW T++ GY G +EA N M T P+ ++
Sbjct: 371 KLGYMNCAHTVFDQLPRKDTISWNTLVTGYTQNGLASEAIDAYNMMEECRDTIPNQGTWV 430
Query: 236 NLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEK 295
++I + VG L + +H+ L+K+ + + L+ +Y KCG LE A +F +
Sbjct: 431 SIIPAYSHVGALQQGMKIHAKLIKNSLYLDVFVATCLIDLYGKCGRLEDAMSLFYEIPRD 490
Query: 296 SVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEI- 354
+ W ++I G EA+ LFK +L V+ + T + LSAC+ G + +G++
Sbjct: 491 TSVPWNAIIASLGIHGRGEEALQLFKDMLAERVKADHITFVSLLSACSHSGLVDEGQKCF 550
Query: 355 ----EEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVP-DKDLAVWSAMINGYA 409
+EY G++ + + ++ + + G + KA E+ +P D ++W A+++
Sbjct: 551 DIMQKEY----GIKPSLKHYGCMVDLLGRAGYLEKAYELVRNMPIQPDASIWGALLSACK 606
Query: 410 IHG 412
I+G
Sbjct: 607 IYG 609
>gi|414587348|tpg|DAA37919.1| TPA: hypothetical protein ZEAMMB73_411767 [Zea mays]
Length = 920
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 200/620 (32%), Positives = 340/620 (54%), Gaps = 6/620 (0%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+I G E L + M +G+ + T +L ACA++ + GK++HS++LK G
Sbjct: 216 LISGHAQCGHGECALQIFDEMQLSGLRPDCVTVASLLAACASVGDLQKGKQLHSYLLKAG 275
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
D + L+D+Y KC D ++ + + + R +VV WN ++ A+ + ++ +
Sbjct: 276 MSFDYITEGSLLDLYVKCGDIETAHDIFN-LGDRT-NVVLWNLMLVAYGQISDLAKSFEI 333
Query: 121 LKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGLLN---NEIPLANSVMSMYAK 177
+M G+ + T+ ++ C+ I + ++ L + N +++ ++ ++ MY+K
Sbjct: 334 FGQMQATGIHPNKFTYPCILRTCTCTGQIELGEQIHSLSIKNGFESDMYVSGVLIDMYSK 393
Query: 178 FGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNL 237
+ +++AR I + + + +VSWT++I GYV EA +M+ V PD + +
Sbjct: 394 YRCLDKARKILEMLEKRDVVSWTSMIAGYVQHDFCEEALATFKEMQDCGVWPDNIGLASA 453
Query: 238 ILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSV 297
CA + + L +H+ + SGY + + N LV++Y +CG E A +F + K
Sbjct: 454 ASACAGIKAMRQGLQIHARVYVSGYAADISIWNTLVNLYARCGRSEEAFSLFREIDHKDE 513
Query: 298 FLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEY 357
W +I G+ Q +A+ +F ++ + + N T + +SA A L + +GK++
Sbjct: 514 ITWNGLISGFGQSRLYEQALMVFMKMSQAGAKYNVFTFISAISALANLADIKQGKQVHGR 573
Query: 358 IVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQA 417
V G S +V +LI ++ KCG I AK +F + ++ W+ +I + HG G +A
Sbjct: 574 AVKTGHTSETEVANALISLYGKCGSIEDAKMIFSEMSLRNEVSWNTIITSCSQHGRGLEA 633
Query: 418 LNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLV 477
L+LF +M+ EGLKP+ V + +L+ACSH G+V++GLS+FKSM + +G+ P +HY C+V
Sbjct: 634 LDLFDQMKQ-EGLKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSNVYGLNPIPDHYACVV 692
Query: 478 DLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTG 537
D+LGRAG+ D A + + EMP+ A +W LLSAC H N+E+GE AAK+LL L P +
Sbjct: 693 DILGRAGQLDRARRFVDEMPITANAMIWRTLLSACKVHKNIEIGELAAKHLLELEPHDSA 752
Query: 538 NYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVD 597
+Y+L++N + G W R +M DR + KEPG S +E+ +V F GDR H LS
Sbjct: 753 SYVLLSNAYAVTGKWANRDQVRKMMKDRGIRKEPGRSWIEVKNAVHAFFVGDRLHPLSDQ 812
Query: 598 IRKTLKELHIKLLEAGYIAE 617
I K L EL+ +L + GY E
Sbjct: 813 IYKFLSELNDRLSKIGYKQE 832
Score = 211 bits (538), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 132/520 (25%), Positives = 258/520 (49%), Gaps = 12/520 (2%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
M+ G +E YS M T V + VL AC G+ +H+ V K
Sbjct: 115 MLSGYAQRGLGKEAFRLYSQMHWTAVIPTPYVLSSVLSACTKGKLFAQGRMIHAQVYKQA 174
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F + FV LI +Y F + +V +M R V++N++IS H++ + A+ +
Sbjct: 175 FCSETFVGNALIALYLGFGSFKLAERVFCDMLFCDR--VTFNTLISGHAQCGHGECALQI 232
Query: 121 LKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
EM + GL T S+++ C+ ++G +H + K G+ + I S++ +Y
Sbjct: 233 FDEMQLSGLRPDCVTVASLLAACASVGDLQKGKQLHSYLLKAGMSFDYIT-EGSLLDLYV 291
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K G + A IF+ T++V W ++ Y + ++ ++F + QM+ + P+ +
Sbjct: 292 KCGDIETAHDIFNLGDRTNVVLWNLMLVAYGQISDLAKSFEIFGQMQATGIHPNKFTYPC 351
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
++ C G + L +HSL +K+G+ ++ + +L+ MY+K L+ AR++ + + ++
Sbjct: 352 ILRTCTCTGQIELGEQIHSLSIKNGFESDMYVSGVLIDMYSKYRCLDKARKILEMLEKRD 411
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEE 356
V WTSMI GY Q + EA+ FK + V P+ LA+ SACA + ++ +G +I
Sbjct: 412 VVSWTSMIAGYVQHDFCEEALATFKEMQDCGVWPDNIGLASAASACAGIKAMRQGLQIHA 471
Query: 357 YIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQ 416
+ ++G ++ + +L++++++CGR +A +F + KD W+ +I+G+ + +Q
Sbjct: 472 RVYVSGYAADISIWNTLVNLYARCGRSEEAFSLFREIDHKDEITWNGLISGFGQSRLYEQ 531
Query: 417 ALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFF-KSMQSNFGIEPSIEHYLC 475
AL +F KM G K + + S +SA ++ + G +++++ E + +
Sbjct: 532 ALMVFMKMSQA-GAKYNVFTFISAISALANLADIKQGKQVHGRAVKTGHTSETEVAN--A 588
Query: 476 LVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKH 515
L+ L G+ G + A EM + + W ++++C +H
Sbjct: 589 LISLYGKCGSIEDAKMIFSEMSLRNEVS-WNTIITSCSQH 627
Score = 201 bits (511), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 133/465 (28%), Positives = 230/465 (49%), Gaps = 10/465 (2%)
Query: 37 LKACANINSIWD-GKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRL 95
L+AC + W +H+ + G D + LID+Y+K +R+V E+ R
Sbjct: 49 LQACRGRGNRWPLVLEIHATSVVRGLGADRLIGNLLIDLYAKNGLVWQARQVFKELSSR- 107
Query: 96 RSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCS----FRQGISM 151
VSW +++S +++ L EA + +M + + SV+S C+ F QG +
Sbjct: 108 -DHVSWVAMLSGYAQRGLGKEAFRLYSQMHWTAVIPTPYVLSSVLSACTKGKLFAQGRMI 166
Query: 152 HCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGN 211
H VYK + E + N+++++Y FG A +F ++ V++ T+I G+ G+
Sbjct: 167 HAQVYKQAFCS-ETFVGNALIALYLGFGSFKLAERVFCDMLFCDRVTFNTLISGHAQCGH 225
Query: 212 VNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNL 271
A + ++M+ + PD V +L+ CA VG+L +HS LLK+G + + +
Sbjct: 226 GECALQIFDEMQLSGLRPDCVTVASLLAACASVGDLQKGKQLHSYLLKAGMSFDYITEGS 285
Query: 272 LVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPN 331
L+ +Y KCGD+E A +F+ +V LW M+ Y Q+ +++ +F ++ T + PN
Sbjct: 286 LLDLYVKCGDIETAHDIFNLGDRTNVVLWNLMLVAYGQISDLAKSFEIFGQMQATGIHPN 345
Query: 332 EATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFE 391
+ T L C G + G++I + NG ES+ V LI M+SK ++KA+++ E
Sbjct: 346 KFTYPCILRTCTCTGQIELGEQIHSLSIKNGFESDMYVSGVLIDMYSKYRCLDKARKILE 405
Query: 392 RVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVD 451
+ +D+ W++MI GY H ++AL F +MQ G+ PD + S SAC+ +
Sbjct: 406 MLEKRDVVSWTSMIAGYVQHDFCEEALATFKEMQDC-GVWPDNIGLASAASACAGIKAMR 464
Query: 452 DGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEM 496
GL + + G I + LV+L R GR + A E+
Sbjct: 465 QGLQIHARVYVS-GYAADISIWNTLVNLYARCGRSEEAFSLFREI 508
>gi|259490042|ref|NP_001159140.1| hypothetical protein [Zea mays]
gi|223942207|gb|ACN25187.1| unknown [Zea mays]
gi|414585730|tpg|DAA36301.1| TPA: hypothetical protein ZEAMMB73_369042 [Zea mays]
Length = 885
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 233/685 (34%), Positives = 356/685 (51%), Gaps = 77/685 (11%)
Query: 4 NSTNNGSFEE-----TLSTYSSMLQTGVH-GNSFTFPLVLKACANINSIWDGKRVHSHVL 57
N+ +G F+ +L T+ SM ++G N+FT +K+C + ++ + V
Sbjct: 126 NTLMSGYFQSRQYLVSLETFLSMHRSGDSWPNAFTLACAMKSCGALGWHSLALQLLAMVQ 185
Query: 58 KVGFQQDAFVQTGLIDMYSKCS--DFVS-----------------------------SRK 86
K Q D+ V L+DM+ +C D S + +
Sbjct: 186 KFDSQDDSEVAAALVDMFVRCGAVDLASRLFVRIKEPTMFCRNSMLAGYVKTYGVDHALE 245
Query: 87 VLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGC--- 143
+ D MP R VVSWN ++SA S++ EA+ ++ +M G+ L ++T+ S ++ C
Sbjct: 246 LFDSMPER--DVVSWNMMVSALSQSGRVREALDMVVDMQSKGVRLDSTTYTSSLTACARL 303
Query: 144 -SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTI 202
S R G +H V + L + + +A++++ +YAK G EA+ +F+ + + + V+WT +
Sbjct: 304 SSLRWGKQLHAQVIR-NLPHIDPYVASALVELYAKSGCFKEAKGVFNSLHDRNNVAWTVL 362
Query: 203 IGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGY 262
I G++ G E+ L NQMR +T D LI GC +L L +HSL LKSG
Sbjct: 363 ISGFLQYGCFTESVELFNQMRAELMTLDQFALATLISGCCSRMDLCLGRQLHSLCLKSGQ 422
Query: 263 NNEDPLDNLLVSMYTKC-------------------------------GDLELARRVFDA 291
+ N L+SMY KC G++ AR FD
Sbjct: 423 IQAVVVSNSLISMYAKCDNLQSAEAIFRFMNEKDIVSWTSMITAYSQVGNVAKAREFFDG 482
Query: 292 VLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTS-VRPNEATLATTLSACAELGSLSK 350
+ EK+V W +M+G Y Q G + + ++K +L VRP+ T T CA+LG+
Sbjct: 483 MSEKNVITWNAMLGAYIQHGAEEDGLRMYKVMLSEEYVRPDWVTYVTLFKGCADLGANKL 542
Query: 351 GKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAI 410
G +I V GL + V ++I M+SKCGRI +A++VF+ + KD+ W+AMI GY+
Sbjct: 543 GDQIIGRTVKVGLIIDTSVANAVITMYSKCGRILEARKVFDFLNVKDIVSWNAMITGYSQ 602
Query: 411 HGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSI 470
HGMG QA+ +F + G KPD + Y ++LS CSHSG+V +G +F M+ I P +
Sbjct: 603 HGMGKQAIEIFDDILK-RGAKPDYISYVAVLSGCSHSGLVQEGKFYFDMMKRAHNISPGL 661
Query: 471 EHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLT 530
EH+ C+VDLLGRAG A I +MP++ A+VW LLSAC H N EL E AAK++
Sbjct: 662 EHFSCMVDLLGRAGHLTEAKDLIDDMPMKPTAEVWGALLSACKIHGNNELAELAAKHVFE 721
Query: 531 LNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDR 590
L+ +G+Y+LMA ++ AG ++A R LM D+ + K PG+S +E+D V VF A D
Sbjct: 722 LDSPDSGSYMLMAKIYADAGKSDDSAQIRKLMRDKGIKKNPGYSWMEVDNKVHVFKADDV 781
Query: 591 SHHLSVDIRKTLKELHIKLLEAGYI 615
SH + IRK L EL K+ GY+
Sbjct: 782 SHPQVLAIRKKLDELMEKIARLGYV 806
Score = 178 bits (451), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 135/503 (26%), Positives = 238/503 (47%), Gaps = 51/503 (10%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
M+ + +G E L M GV +S T+ L ACA ++S+ GK++H+ V++
Sbjct: 261 MVSALSQSGRVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNL 320
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
D +V + L+++Y+K F ++ V + + R+ V+W +IS + E++ +
Sbjct: 321 PHIDPYVASALVELYAKSGCFKEAKGVFNSL--HDRNNVAWTVLISGFLQYGCFTESVEL 378
Query: 121 LKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGLLNNEIP---LANSVMSMYAK 177
+M + L +++SGC R + + ++ L L + +I ++NS++SMYAK
Sbjct: 379 FNQMRAELMTLDQFALATLISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISMYAK 438
Query: 178 FGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMR-------------- 223
+ A +IF + E IVSWT++I Y VGNV +A + M
Sbjct: 439 CDNLQSAEAIFRFMNEKDIVSWTSMITAYSQVGNVAKAREFFDGMSEKNVITWNAMLGAY 498
Query: 224 ----------RM--------SVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNE 265
RM V PD V ++ L GCA +G L + +K G +
Sbjct: 499 IQHGAEEDGLRMYKVMLSEEYVRPDWVTYVTLFKGCADLGANKLGDQIIGRTVKVGLIID 558
Query: 266 DPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLK 325
+ N +++MY+KCG + AR+VFD + K + W +MI GY+Q G +A+ +F +LK
Sbjct: 559 TSVANAVITMYSKCGRILEARKVFDFLNVKDIVSWNAMITGYSQHGMGKQAIEIFDDILK 618
Query: 326 TSVRPNEATLATTLSACAELGSLSKGKEIEEYI-----VLNGLESNRQVQTSLIHMFSKC 380
+P+ + LS C+ G + +GK + + + GLE + ++ + +
Sbjct: 619 RGAKPDYISYVAVLSGCSHSGLVQEGKFYFDMMKRAHNISPGLEHF----SCMVDLLGRA 674
Query: 381 GRINKAKEVFERVPDKDLA-VWSAMINGYAIHGMGDQALNLFYKMQHVEGL-KPDAVVYT 438
G + +AK++ + +P K A VW A+++ IHG + A +HV L PD+ Y
Sbjct: 675 GHLTEAKDLIDDMPMKPTAEVWGALLSACKIHGNNELAE---LAAKHVFELDSPDSGSYM 731
Query: 439 SILSACSHSGMVDDGLSFFKSMQ 461
+ + +G DD K M+
Sbjct: 732 LMAKIYADAGKSDDSAQIRKLMR 754
Score = 132 bits (331), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 111/511 (21%), Positives = 221/511 (43%), Gaps = 72/511 (14%)
Query: 32 TFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEM 91
F L++C ++ + +H ++ VG F+Q L+ Y C +R++L M
Sbjct: 26 AFADALRSCGARGALAGARALHGRLVAVGLASAVFLQNTLLHAYLSCGALSDARRLL-LM 84
Query: 92 PVRLRSVVSWNSIISAHSRACLNDEAILVLKEM-------WVLGLE---------LSAST 135
+ +V++ N +++ +++ +A+ + M W + +S T
Sbjct: 85 DIAHPNVITHNVMLNGYAKLGRLSDAVELFGRMPARDVASWNTLMSGYFQSRQYLVSLET 144
Query: 136 FVSV-VSGCSFRQGISMHCCVYKLGLL--------------------NNEIPLA------ 168
F+S+ SG S+ ++ C + G L ++E+ A
Sbjct: 145 FLSMHRSGDSWPNAFTLACAMKSCGALGWHSLALQLLAMVQKFDSQDDSEVAAALVDMFV 204
Query: 169 -----------------------NSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGG 205
NS+++ Y K V+ A +FD + E +VSW ++
Sbjct: 205 RCGAVDLASRLFVRIKEPTMFCRNSMLAGYVKTYGVDHALELFDSMPERDVVSWNMMVSA 264
Query: 206 YVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNE 265
G V EA + M+ V D + + + CA++ +L +H+ ++++ + +
Sbjct: 265 LSQSGRVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPHID 324
Query: 266 DPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLK 325
+ + LV +Y K G + A+ VF+++ +++ WT +I G+ Q G +E+V LF ++
Sbjct: 325 PYVASALVELYAKSGCFKEAKGVFNSLHDRNNVAWTVLISGFLQYGCFTESVELFNQMRA 384
Query: 326 TSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINK 385
+ ++ LAT +S C L G+++ + +G V SLI M++KC +
Sbjct: 385 ELMTLDQFALATLISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQS 444
Query: 386 AKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACS 445
A+ +F + +KD+ W++MI Y+ G +A F M + + + + ++L A
Sbjct: 445 AEAIFRFMNEKDIVSWTSMITAYSQVGNVAKAREFFDGMS-----EKNVITWNAMLGAYI 499
Query: 446 HSGMVDDGLSFFKSMQSNFGIEPSIEHYLCL 476
G +DGL +K M S + P Y+ L
Sbjct: 500 QHGAEEDGLRMYKVMLSEEYVRPDWVTYVTL 530
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 91/378 (24%), Positives = 154/378 (40%), Gaps = 78/378 (20%)
Query: 225 MSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLEL 284
M+VT F + + C G L A ++H L+ G + L N L+ Y CG L
Sbjct: 21 MAVTQ---AFADALRSCGARGALAGARALHGRLVAVGLASAVFLQNTLLHAYLSCGALSD 77
Query: 285 ARR-VFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVR-------------- 329
ARR + + +V M+ GYA+LG S+AV LF R+ V
Sbjct: 78 ARRLLLMDIAHPNVITHNVMLNGYAKLGRLSDAVELFGRMPARDVASWNTLMSGYFQSRQ 137
Query: 330 ------------------PNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQT 371
PN TLA + +C LG S ++ + + + +V
Sbjct: 138 YLVSLETFLSMHRSGDSWPNAFTLACAMKSCGALGWHSLALQLLAMVQKFDSQDDSEVAA 197
Query: 372 SLIHMFSKCGRINKAK-------------------------------EVFERVPDKDLAV 400
+L+ MF +CG ++ A E+F+ +P++D+
Sbjct: 198 ALVDMFVRCGAVDLASRLFVRIKEPTMFCRNSMLAGYVKTYGVDHALELFDSMPERDVVS 257
Query: 401 WSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSM 460
W+ M++ + G +AL++ MQ +G++ D+ YTS L+AC+ + G +
Sbjct: 258 WNMMVSALSQSGRVREALDMVVDMQS-KGVRLDSTTYTSSLTACARLSSLRWGKQLHAQV 316
Query: 461 QSNFGIEPSIEHYL--CLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKH--- 515
N P I+ Y+ LV+L ++G F A K + + W L+S +++
Sbjct: 317 IRNL---PHIDPYVASALVELYAKSGCFKEA-KGVFNSLHDRNNVAWTVLISGFLQYGCF 372
Query: 516 -HNVELGEYAAKNLLTLN 532
+VEL L+TL+
Sbjct: 373 TESVELFNQMRAELMTLD 390
>gi|414585731|tpg|DAA36302.1| TPA: hypothetical protein ZEAMMB73_369042 [Zea mays]
Length = 865
Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust.
Identities = 233/685 (34%), Positives = 356/685 (51%), Gaps = 77/685 (11%)
Query: 4 NSTNNGSFEE-----TLSTYSSMLQTGVH-GNSFTFPLVLKACANINSIWDGKRVHSHVL 57
N+ +G F+ +L T+ SM ++G N+FT +K+C + ++ + V
Sbjct: 106 NTLMSGYFQSRQYLVSLETFLSMHRSGDSWPNAFTLACAMKSCGALGWHSLALQLLAMVQ 165
Query: 58 KVGFQQDAFVQTGLIDMYSKCS--DFVS-----------------------------SRK 86
K Q D+ V L+DM+ +C D S + +
Sbjct: 166 KFDSQDDSEVAAALVDMFVRCGAVDLASRLFVRIKEPTMFCRNSMLAGYVKTYGVDHALE 225
Query: 87 VLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGC--- 143
+ D MP R VVSWN ++SA S++ EA+ ++ +M G+ L ++T+ S ++ C
Sbjct: 226 LFDSMPER--DVVSWNMMVSALSQSGRVREALDMVVDMQSKGVRLDSTTYTSSLTACARL 283
Query: 144 -SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTI 202
S R G +H V + L + + +A++++ +YAK G EA+ +F+ + + + V+WT +
Sbjct: 284 SSLRWGKQLHAQVIR-NLPHIDPYVASALVELYAKSGCFKEAKGVFNSLHDRNNVAWTVL 342
Query: 203 IGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGY 262
I G++ G E+ L NQMR +T D LI GC +L L +HSL LKSG
Sbjct: 343 ISGFLQYGCFTESVELFNQMRAELMTLDQFALATLISGCCSRMDLCLGRQLHSLCLKSGQ 402
Query: 263 NNEDPLDNLLVSMYTKC-------------------------------GDLELARRVFDA 291
+ N L+SMY KC G++ AR FD
Sbjct: 403 IQAVVVSNSLISMYAKCDNLQSAEAIFRFMNEKDIVSWTSMITAYSQVGNVAKAREFFDG 462
Query: 292 VLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTS-VRPNEATLATTLSACAELGSLSK 350
+ EK+V W +M+G Y Q G + + ++K +L VRP+ T T CA+LG+
Sbjct: 463 MSEKNVITWNAMLGAYIQHGAEEDGLRMYKVMLSEEYVRPDWVTYVTLFKGCADLGANKL 522
Query: 351 GKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAI 410
G +I V GL + V ++I M+SKCGRI +A++VF+ + KD+ W+AMI GY+
Sbjct: 523 GDQIIGRTVKVGLIIDTSVANAVITMYSKCGRILEARKVFDFLNVKDIVSWNAMITGYSQ 582
Query: 411 HGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSI 470
HGMG QA+ +F + G KPD + Y ++LS CSHSG+V +G +F M+ I P +
Sbjct: 583 HGMGKQAIEIFDDILK-RGAKPDYISYVAVLSGCSHSGLVQEGKFYFDMMKRAHNISPGL 641
Query: 471 EHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLT 530
EH+ C+VDLLGRAG A I +MP++ A+VW LLSAC H N EL E AAK++
Sbjct: 642 EHFSCMVDLLGRAGHLTEAKDLIDDMPMKPTAEVWGALLSACKIHGNNELAELAAKHVFE 701
Query: 531 LNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDR 590
L+ +G+Y+LMA ++ AG ++A R LM D+ + K PG+S +E+D V VF A D
Sbjct: 702 LDSPDSGSYMLMAKIYADAGKSDDSAQIRKLMRDKGIKKNPGYSWMEVDNKVHVFKADDV 761
Query: 591 SHHLSVDIRKTLKELHIKLLEAGYI 615
SH + IRK L EL K+ GY+
Sbjct: 762 SHPQVLAIRKKLDELMEKIARLGYV 786
Score = 178 bits (452), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 133/503 (26%), Positives = 237/503 (47%), Gaps = 51/503 (10%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
M+ + +G E L M GV +S T+ L ACA ++S+ GK++H+ V++
Sbjct: 241 MVSALSQSGRVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNL 300
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
D +V + L+++Y+K F ++ V + + R+ V+W +IS + E++ +
Sbjct: 301 PHIDPYVASALVELYAKSGCFKEAKGVFNSL--HDRNNVAWTVLISGFLQYGCFTESVEL 358
Query: 121 LKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGLLNNEIP---LANSVMSMYAK 177
+M + L +++SGC R + + ++ L L + +I ++NS++SMYAK
Sbjct: 359 FNQMRAELMTLDQFALATLISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISMYAK 418
Query: 178 FGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVT--------- 228
+ A +IF + E IVSWT++I Y VGNV +A + M +V
Sbjct: 419 CDNLQSAEAIFRFMNEKDIVSWTSMITAYSQVGNVAKAREFFDGMSEKNVITWNAMLGAY 478
Query: 229 -----------------------PDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNE 265
PD V ++ L GCA +G L + +K G +
Sbjct: 479 IQHGAEEDGLRMYKVMLSEEYVRPDWVTYVTLFKGCADLGANKLGDQIIGRTVKVGLIID 538
Query: 266 DPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLK 325
+ N +++MY+KCG + AR+VFD + K + W +MI GY+Q G +A+ +F +LK
Sbjct: 539 TSVANAVITMYSKCGRILEARKVFDFLNVKDIVSWNAMITGYSQHGMGKQAIEIFDDILK 598
Query: 326 TSVRPNEATLATTLSACAELGSLSKGKEIEEYI-----VLNGLESNRQVQTSLIHMFSKC 380
+P+ + LS C+ G + +GK + + + GLE + ++ + +
Sbjct: 599 RGAKPDYISYVAVLSGCSHSGLVQEGKFYFDMMKRAHNISPGLEHF----SCMVDLLGRA 654
Query: 381 GRINKAKEVFERVPDKDLA-VWSAMINGYAIHGMGDQALNLFYKMQHVEGL-KPDAVVYT 438
G + +AK++ + +P K A VW A+++ IHG + A +HV L PD+ Y
Sbjct: 655 GHLTEAKDLIDDMPMKPTAEVWGALLSACKIHGNNELAE---LAAKHVFELDSPDSGSYM 711
Query: 439 SILSACSHSGMVDDGLSFFKSMQ 461
+ + +G DD K M+
Sbjct: 712 LMAKIYADAGKSDDSAQIRKLMR 734
Score = 132 bits (331), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 111/511 (21%), Positives = 221/511 (43%), Gaps = 72/511 (14%)
Query: 32 TFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEM 91
F L++C ++ + +H ++ VG F+Q L+ Y C +R++L M
Sbjct: 6 AFADALRSCGARGALAGARALHGRLVAVGLASAVFLQNTLLHAYLSCGALSDARRLL-LM 64
Query: 92 PVRLRSVVSWNSIISAHSRACLNDEAILVLKEM-------WVLGLE---------LSAST 135
+ +V++ N +++ +++ +A+ + M W + +S T
Sbjct: 65 DIAHPNVITHNVMLNGYAKLGRLSDAVELFGRMPARDVASWNTLMSGYFQSRQYLVSLET 124
Query: 136 FVSV-VSGCSFRQGISMHCCVYKLGLL--------------------NNEIPLA------ 168
F+S+ SG S+ ++ C + G L ++E+ A
Sbjct: 125 FLSMHRSGDSWPNAFTLACAMKSCGALGWHSLALQLLAMVQKFDSQDDSEVAAALVDMFV 184
Query: 169 -----------------------NSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGG 205
NS+++ Y K V+ A +FD + E +VSW ++
Sbjct: 185 RCGAVDLASRLFVRIKEPTMFCRNSMLAGYVKTYGVDHALELFDSMPERDVVSWNMMVSA 244
Query: 206 YVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNE 265
G V EA + M+ V D + + + CA++ +L +H+ ++++ + +
Sbjct: 245 LSQSGRVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPHID 304
Query: 266 DPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLK 325
+ + LV +Y K G + A+ VF+++ +++ WT +I G+ Q G +E+V LF ++
Sbjct: 305 PYVASALVELYAKSGCFKEAKGVFNSLHDRNNVAWTVLISGFLQYGCFTESVELFNQMRA 364
Query: 326 TSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINK 385
+ ++ LAT +S C L G+++ + +G V SLI M++KC +
Sbjct: 365 ELMTLDQFALATLISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQS 424
Query: 386 AKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACS 445
A+ +F + +KD+ W++MI Y+ G +A F M + + + + ++L A
Sbjct: 425 AEAIFRFMNEKDIVSWTSMITAYSQVGNVAKAREFFDGMS-----EKNVITWNAMLGAYI 479
Query: 446 HSGMVDDGLSFFKSMQSNFGIEPSIEHYLCL 476
G +DGL +K M S + P Y+ L
Sbjct: 480 QHGAEEDGLRMYKVMLSEEYVRPDWVTYVTL 510
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 91/378 (24%), Positives = 154/378 (40%), Gaps = 78/378 (20%)
Query: 225 MSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLEL 284
M+VT F + + C G L A ++H L+ G + L N L+ Y CG L
Sbjct: 1 MAVTQ---AFADALRSCGARGALAGARALHGRLVAVGLASAVFLQNTLLHAYLSCGALSD 57
Query: 285 ARR-VFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVR-------------- 329
ARR + + +V M+ GYA+LG S+AV LF R+ V
Sbjct: 58 ARRLLLMDIAHPNVITHNVMLNGYAKLGRLSDAVELFGRMPARDVASWNTLMSGYFQSRQ 117
Query: 330 ------------------PNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQT 371
PN TLA + +C LG S ++ + + + +V
Sbjct: 118 YLVSLETFLSMHRSGDSWPNAFTLACAMKSCGALGWHSLALQLLAMVQKFDSQDDSEVAA 177
Query: 372 SLIHMFSKCGRINKAK-------------------------------EVFERVPDKDLAV 400
+L+ MF +CG ++ A E+F+ +P++D+
Sbjct: 178 ALVDMFVRCGAVDLASRLFVRIKEPTMFCRNSMLAGYVKTYGVDHALELFDSMPERDVVS 237
Query: 401 WSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSM 460
W+ M++ + G +AL++ MQ +G++ D+ YTS L+AC+ + G +
Sbjct: 238 WNMMVSALSQSGRVREALDMVVDMQS-KGVRLDSTTYTSSLTACARLSSLRWGKQLHAQV 296
Query: 461 QSNFGIEPSIEHYL--CLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKH--- 515
N P I+ Y+ LV+L ++G F A K + + W L+S +++
Sbjct: 297 IRNL---PHIDPYVASALVELYAKSGCFKEA-KGVFNSLHDRNNVAWTVLISGFLQYGCF 352
Query: 516 -HNVELGEYAAKNLLTLN 532
+VEL L+TL+
Sbjct: 353 TESVELFNQMRAELMTLD 370
>gi|357480155|ref|XP_003610363.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355511418|gb|AES92560.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 734
Score = 370 bits (949), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 209/613 (34%), Positives = 345/613 (56%), Gaps = 9/613 (1%)
Query: 15 LSTYSSMLQTG-VHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLID 73
+S + M++ V N+ T V A +N++ + GK+ HS +K G D +V + L++
Sbjct: 102 ISLFRRMMRANNVIPNAHTLAGVFSAASNLSDVVAGKQAHSVAVKTGCSGDVYVGSSLLN 161
Query: 74 MYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWV---LGLE 130
MY K +RK+ D MP R + VSW ++IS ++ + + D+A+ V + M + E
Sbjct: 162 MYCKTGFVFDARKLFDRMPER--NTVSWATMISGYASSDIADKAVEVFELMRREEEIQNE 219
Query: 131 LSASTFVSVVSGCSF-RQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFD 189
+ ++ +S ++ F G +H K GLL + +AN++++MYAK G +++A F+
Sbjct: 220 FALTSVLSALTSDVFVYTGRQVHSLAIKNGLLA-IVSVANALVTMYAKCGSLDDAVRTFE 278
Query: 190 EIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFL 249
G+ + ++W+ ++ GY G+ ++A L N+M V P + +I C+ + +
Sbjct: 279 FSGDKNSITWSAMVTGYAQGGDSDKALKLFNKMHSSGVLPSEFTLVGVINACSDLCAVVE 338
Query: 250 ALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQ 309
MHS K G+ + + + +V MY KCG L AR+ F+ V + V LWTS+I GY Q
Sbjct: 339 GKQMHSFAFKLGFGLQLYVLSAVVDMYAKCGSLADARKGFECVQQPDVVLWTSIITGYVQ 398
Query: 310 LGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQV 369
G +NL+ ++ V PNE T+A+ L AC+ L +L +GK++ I+ G + +
Sbjct: 399 NGDYEGGLNLYGKMQMERVIPNELTMASVLRACSSLAALDQGKQMHARIIKYGFKLEVPI 458
Query: 370 QTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEG 429
++L M++KCG ++ +F R+P +D+ W+AMI+G + +G G++AL LF KM +EG
Sbjct: 459 GSALSAMYTKCGSLDDGYLIFWRMPSRDVISWNAMISGLSQNGHGNKALELFEKML-LEG 517
Query: 430 LKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLA 489
+KPD V + ++LSACSH G+VD G +FK M F I P +EHY C+VD+L RAG+ + A
Sbjct: 518 IKPDPVTFVNLLSACSHMGLVDRGWEYFKMMFDEFNIAPMVEHYACMVDILSRAGKLNEA 577
Query: 490 LKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSA 549
+ I V+ +W LL AC H N ELG YA + L+ L + Y+L+++++T+
Sbjct: 578 KEFIESATVDHGLCLWRILLGACKNHRNYELGVYAGEKLVELGSPESSAYVLLSSIYTAL 637
Query: 550 GMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKELHIKL 609
G + R +M R + KEPG S +E+ G V VFV GD H +IR L+ L +
Sbjct: 638 GDRENVERVRRIMKARGVNKEPGCSWIELKGLVHVFVVGDNQHPQVDEIRLELELLTKLM 697
Query: 610 LEAGYIAEADIVP 622
++ GY D +P
Sbjct: 698 IDEGYQPLLDRLP 710
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 121/425 (28%), Positives = 220/425 (51%), Gaps = 10/425 (2%)
Query: 37 LKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLR 96
L C + +I G+ +H+ +LK G +V +++Y+K + + + D + +
Sbjct: 18 LIECTHNKNILKGRTLHARILKTGSISSIYVTNTFLNLYAKTNHLSHALTLFDSINDNDK 77
Query: 97 SVVSWNSIISAHSRACLNDEAILVL----KEMWVLGLELSASTFVSVVSGCS----FRQG 148
VSWNS+I+A S+ + + + + M + +A T V S S G
Sbjct: 78 DDVSWNSLINAFSQNHSSSSSSFAISLFRRMMRANNVIPNAHTLAGVFSAASNLSDVVAG 137
Query: 149 ISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVN 208
H K G + ++ + +S+++MY K G V +AR +FD + E + VSW T+I GY +
Sbjct: 138 KQAHSVAVKTG-CSGDVYVGSSLLNMYCKTGFVFDARKLFDRMPERNTVSWATMISGYAS 196
Query: 209 VGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPL 268
++A + MRR + +++ ++ +HSL +K+G +
Sbjct: 197 SDIADKAVEVFELMRREEEIQNEFALTSVLSALTSDVFVYTGRQVHSLAIKNGLLAIVSV 256
Query: 269 DNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSV 328
N LV+MY KCG L+ A R F+ +K+ W++M+ GYAQ G +A+ LF ++ + V
Sbjct: 257 ANALVTMYAKCGSLDDAVRTFEFSGDKNSITWSAMVTGYAQGGDSDKALKLFNKMHSSGV 316
Query: 329 RPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKE 388
P+E TL ++AC++L ++ +GK++ + G V ++++ M++KCG + A++
Sbjct: 317 LPSEFTLVGVINACSDLCAVVEGKQMHSFAFKLGFGLQLYVLSAVVDMYAKCGSLADARK 376
Query: 389 VFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSG 448
FE V D+ +W+++I GY +G + LNL+ KMQ +E + P+ + S+L ACS
Sbjct: 377 GFECVQQPDVVLWTSIITGYVQNGDYEGGLNLYGKMQ-MERVIPNELTMASVLRACSSLA 435
Query: 449 MVDDG 453
+D G
Sbjct: 436 ALDQG 440
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 79/313 (25%), Positives = 155/313 (49%), Gaps = 11/313 (3%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
M+ G ++ L ++ M +GV + FT V+ AC+++ ++ +GK++HS K+G
Sbjct: 291 MVTGYAQGGDSDKALKLFNKMHSSGVLPSEFTLVGVINACSDLCAVVEGKQMHSFAFKLG 350
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F +V + ++DMY+KC +RK + V+ VV W SII+ + + + + +
Sbjct: 351 FGLQLYVLSAVVDMYAKCGSLADARKGFE--CVQQPDVVLWTSIITGYVQNGDYEGGLNL 408
Query: 121 LKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
+M + + + T SV+ CS QG MH + K G E+P+ +++ +MY
Sbjct: 409 YGKMQMERVIPNELTMASVLRACSSLAALDQGKQMHARIIKYG-FKLEVPIGSALSAMYT 467
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K G +++ IF + ++SW +I G G+ N+A L +M + PD V F+N
Sbjct: 468 KCGSLDDGYLIFWRMPSRDVISWNAMISGLSQNGHGNKALELFEKMLLEGIKPDPVTFVN 527
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNL--LVSMYTKCGDLELARRVFD-AVL 293
L+ C+ +G + ++ +N +++ +V + ++ G L A+ + A +
Sbjct: 528 LLSACSHMGLVDRGWEYFKMMFDE-FNIAPMVEHYACMVDILSRAGKLNEAKEFIESATV 586
Query: 294 EKSVFLWTSMIGG 306
+ + LW ++G
Sbjct: 587 DHGLCLWRILLGA 599
Score = 106 bits (264), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 145/289 (50%), Gaps = 9/289 (3%)
Query: 229 PDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRV 288
P L ++ C N+ ++H+ +LK+G + + N +++Y K L A +
Sbjct: 9 PQHRQLLQDLIECTHNKNILKGRTLHARILKTGSISSIYVTNTFLNLYAKTNHLSHALTL 68
Query: 289 FDAV--LEKSVFLWTSMIGGYAQ---LGYPSEAVNLFKRLLKT-SVRPNEATLATTLSAC 342
FD++ +K W S+I ++Q S A++LF+R+++ +V PN TLA SA
Sbjct: 69 FDSINDNDKDDVSWNSLINAFSQNHSSSSSSFAISLFRRMMRANNVIPNAHTLAGVFSAA 128
Query: 343 AELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWS 402
+ L + GK+ V G + V +SL++M+ K G + A+++F+R+P+++ W+
Sbjct: 129 SNLSDVVAGKQAHSVAVKTGCSGDVYVGSSLLNMYCKTGFVFDARKLFDRMPERNTVSWA 188
Query: 403 AMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQS 462
MI+GYA + D+A+ +F M+ E ++ + TS+LSA + V G S+
Sbjct: 189 TMISGYASSDIADKAVEVFELMRREEEIQ-NEFALTSVLSALTSDVFVYTGRQ-VHSLAI 246
Query: 463 NFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSA 511
G+ + LV + + G D A++T E + + W+ +++
Sbjct: 247 KNGLLAIVSVANALVTMYAKCGSLDDAVRTF-EFSGDKNSITWSAMVTG 294
>gi|49333391|gb|AAT64030.1| putative pentatricopeptide repeat protein [Gossypium hirsutum]
Length = 805
Score = 370 bits (949), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 206/639 (32%), Positives = 329/639 (51%), Gaps = 75/639 (11%)
Query: 32 TFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEM 91
T+ VL+ CA + S+ DGK+VHS + D + L+ Y+ C D R+V D M
Sbjct: 101 TYGSVLQLCAGLKSLTDGKKVHSIIKSNSVGVDEALGLKLVSFYATCGDLKEGRRVFDTM 160
Query: 92 PVR-------------------------------------------------LRSVVSWN 102
+ R V+SWN
Sbjct: 161 EKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEGKRPESASELFDKLCDRDVISWN 220
Query: 103 SIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGL-- 160
S+IS + L + + + K+M LG+++ +T +SV+ GC+ +S+ V+ L +
Sbjct: 221 SMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKS 280
Query: 161 -LNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLC 219
I +N+++ MY+K G ++ A +F+++GE ++VSWT++I GY G + A L
Sbjct: 281 SFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGWSDGAIILL 340
Query: 220 NQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKC 279
QM + V D+V +++ CA+ G+L +H + + + + N L+ MY KC
Sbjct: 341 QQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNMASNLFVCNALMDMYAKC 400
Query: 280 GDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTL 339
G +E A VF ++ K + W +M+G ++P+ T+A L
Sbjct: 401 GSMEGANSVFSTMVVKDIISWNTMVG---------------------ELKPDSRTMACIL 439
Query: 340 SACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLA 399
ACA L +L +GKEI YI+ NG S+R V +L+ ++ KCG + A+ +F+ +P KDL
Sbjct: 440 PACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLV 499
Query: 400 VWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKS 459
W+ MI GY +HG G++A+ F +M+ G++PD V + SIL ACSHSG+++ G FF
Sbjct: 500 SWTVMIAGYGMHGYGNEAIATFNEMRDA-GIEPDEVSFISILYACSHSGLLEQGWRFFYI 558
Query: 460 MQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVE 519
M+++F IEP +EHY C+VDLL R G A K I +P+ A +W LL C +H++E
Sbjct: 559 MKNDFNIEPKLEHYACMVDLLSRTGNLSKAYKFIETLPIAPDATIWGALLCGCRIYHDIE 618
Query: 520 LGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEID 579
L E A+ + L P +TG Y+L+AN++ A +E R + + L K PG S +EI
Sbjct: 619 LAEKVAERVFELEPENTGYYVLLANIYAEAEKREEVKRMREKIGKKGLRKNPGCSWIEIK 678
Query: 580 GSVQVFVAGDRSHHL-SVDIRKTLKELHIKLLEAGYIAE 617
G V +FV+G+ S H S I LK++ K+ E GY +
Sbjct: 679 GRVNLFVSGNNSSHPHSKKIESLLKKMRRKMKEEGYFPK 717
Score = 194 bits (492), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 125/418 (29%), Positives = 207/418 (49%), Gaps = 32/418 (7%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI +NG E L Y M+ G+ + T VL CAN ++ GK VHS +K
Sbjct: 222 MISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSS 281
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F++ L+DMYSKC D + +V ++M R+VVSW S+I+ ++R +D AI++
Sbjct: 282 FERRINFSNTLLDMYSKCGDLDGALRVFEKMGE--RNVVSWTSMIAGYTRDGWSDGAIIL 339
Query: 121 LKEMWVLGLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
L++M G++L S++ C S G +H + + +N + + N++M MYA
Sbjct: 340 LQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNMASN-LFVCNALMDMYA 398
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K G + A S+F + I+SW T++G + PD
Sbjct: 399 KCGSMEGANSVFSTMVVKDIISWNTMVG---------------------ELKPDSRTMAC 437
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
++ CA + L +H +L++GY+++ + N LV +Y KCG L LAR +FD + K
Sbjct: 438 ILPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKD 497
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEE 356
+ WT MI GY GY +EA+ F + + P+E + + L AC+ G L +G
Sbjct: 498 LVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWRF-F 556
Query: 357 YIVLN--GLESNRQVQTSLIHMFSKCGRINKAKEVFERVP-DKDLAVWSAMINGYAIH 411
YI+ N +E + ++ + S+ G ++KA + E +P D +W A++ G I+
Sbjct: 557 YIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYKFIETLPIAPDATIWGALLCGCRIY 614
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 50/223 (22%), Positives = 103/223 (46%), Gaps = 19/223 (8%)
Query: 292 VLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKG 351
++ V + + I + QLG A+ L K+ + T + L CA L SL+ G
Sbjct: 61 TIDHQVTDYNAKILHFCQLGDLENAMELVCMCQKSELETK--TYGSVLQLCAGLKSLTDG 118
Query: 352 KEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIH 411
K++ I N + + + L+ ++ CG + + + VF+ + K++ +W+ M++ YA
Sbjct: 119 KKVHSIIKSNSVGVDEALGLKLVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKI 178
Query: 412 GMGDQALNLFYKM--QHVEGLKP-------------DAVVYTSILSACSHSGMVDDGLSF 456
G +++ LF M + +EG +P D + + S++S +G+ + GL
Sbjct: 179 GDFKESICLFKIMVEKGIEGKRPESASELFDKLCDRDVISWNSMISGYVSNGLTERGLGI 238
Query: 457 FKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVE 499
+K M GI+ + + ++ +G L K +H + ++
Sbjct: 239 YKQMMY-LGIDVDLATIISVLVGCANSGTLSLG-KAVHSLAIK 279
>gi|359482718|ref|XP_002263673.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Vitis vinifera]
Length = 1088
Score = 369 bits (948), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 198/650 (30%), Positives = 352/650 (54%), Gaps = 41/650 (6%)
Query: 9 GSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQ 68
G F + L + M ++G N F +L A A + I G+ +H H+++ D +
Sbjct: 356 GHFNDALVLFLRMQESGYKSNRFNLGSILMASAGLADIGKGRELHGHLVRNLLNSDIILG 415
Query: 69 TGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVL- 127
+ L+DMYSKC + +V + R + VS+N++++ + + +EA+ + +M
Sbjct: 416 SALVDMYSKCGMVEEAHQVFRSLLER--NEVSYNALLAGYVQEGKAEEALELYHDMQSED 473
Query: 128 GLELSASTFVSVVSGCSFR----QGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNE 183
G++ TF ++++ C+ + QG +H + + + N I + ++ MY++ G++N
Sbjct: 474 GIQPDQFTFTTLLTLCANQRNDNQGRQIHAHLIRANITKN-IIVETELVHMYSECGRLNY 532
Query: 184 ARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQ 243
A+ IF+ + E + SW ++I GY G EA L QM+ + PD +++ C
Sbjct: 533 AKEIFNRMAERNAYSWNSMIEGYQQNGETQEALRLFKQMQLNGIKPDCFSLSSMLSSCVS 592
Query: 244 VGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFL---- 299
+ + +H+ ++++ E L +LV MY KCG ++ A +V+D ++K V L
Sbjct: 593 LSDSQKGRELHNFIVRNTMEEEGILQVVLVDMYAKCGSMDYAWKVYDQTIKKDVILNNVM 652
Query: 300 ---------------------------WTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNE 332
W S++ GYA G E+ N F +L++ + +
Sbjct: 653 VSAFVNSGRANDAKNLFDQMEQRNTALWNSILAGYANKGLKKESFNHFLEMLESDIEYDV 712
Query: 333 ATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQV-QTSLIHMFSKCGRINKAKEVFE 391
T+ T ++ C+ L +L G ++ I+ G + V +T+L+ M+SKCG I KA+ VF+
Sbjct: 713 LTMVTIVNLCSSLPALEHGDQLHSLIIKKGFVNCSVVLETALVDMYSKCGAITKARTVFD 772
Query: 392 RVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVD 451
+ K++ W+AMI+GY+ HG +AL L+ +M +G+ P+ V + +ILSACSH+G+V+
Sbjct: 773 NMNGKNIVSWNAMISGYSKHGCSKEALILYEEMPK-KGMYPNEVTFLAILSACSHTGLVE 831
Query: 452 DGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSA 511
+GL F SMQ ++ IE EHY C+VDLLGRAGR + A + + +MP+E + W LL A
Sbjct: 832 EGLRIFTSMQEDYNIEAKAEHYTCMVDLLGRAGRLEDAKEFVEKMPIEPEVSTWGALLGA 891
Query: 512 CMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEP 571
C H ++++G AA+ L L+P + G Y++M+N++ +AG WKE R +M + + K+P
Sbjct: 892 CRVHKDMDMGRLAAQRLFELDPQNPGPYVIMSNIYAAAGRWKEVEDIRQMMKMKGVKKDP 951
Query: 572 GWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKELHIKLLEAGYIAEADIV 621
G S +EI+ +Q+F AG ++H + +I L+ L ++ GYI + +
Sbjct: 952 GVSWIEINSEIQIFHAGSKTHPKTEEIYNNLRHLTLQSKGLGYIPDTSFI 1001
Score = 246 bits (629), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 152/473 (32%), Positives = 256/473 (54%), Gaps = 28/473 (5%)
Query: 10 SFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQT 69
S+EE + ML+ GV ++FTF L+ C + S GK+VHS ++ GF+ D FV
Sbjct: 256 SWEEAWGIFDRMLKIGVCPDNFTFASALRVCGALRSRDGGKQVHSKLIACGFKGDTFVGN 315
Query: 70 GLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSR-ACLNDEAILVLK------ 122
LIDMY+KC D S KV DEM R + V+WNSIISA ++ ND +L L+
Sbjct: 316 ALIDMYAKCDDEESCLKVFDEMGER--NQVTWNSIISAEAQFGHFNDALVLFLRMQESGY 373
Query: 123 --EMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGK 180
+ LG L AS ++ + +G +H + + LLN++I L ++++ MY+K G
Sbjct: 374 KSNRFNLGSILMASAGLADIG-----KGRELHGHLVR-NLLNSDIILGSALVDMYSKCGM 427
Query: 181 VNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMS-VTPDLVVFLNLIL 239
V EA +F + E + VS+ ++ GYV G EA L + M+ + PD F L+
Sbjct: 428 VEEAHQVFRSLLERNEVSYNALLAGYVQEGKAEEALELYHDMQSEDGIQPDQFTFTTLLT 487
Query: 240 GCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFL 299
CA N +H+ L+++ ++ LV MY++CG L A+ +F+ + E++ +
Sbjct: 488 LCANQRNDNQGRQIHAHLIRANITKNIIVETELVHMYSECGRLNYAKEIFNRMAERNAYS 547
Query: 300 WTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIV 359
W SMI GY Q G EA+ LFK++ ++P+ +L++ LS+C L KG+E+ +IV
Sbjct: 548 WNSMIEGYQQNGETQEALRLFKQMQLNGIKPDCFSLSSMLSSCVSLSDSQKGRELHNFIV 607
Query: 360 LNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALN 419
N +E +Q L+ M++KCG ++ A +V+++ KD+ + + M++ + G + A N
Sbjct: 608 RNTMEEEGILQVVLVDMYAKCGSMDYAWKVYDQTIKKDVILNNVMVSAFVNSGRANDAKN 667
Query: 420 LFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEH 472
LF +M+ + + ++ SIL+ ++ G+ + + F M +E IE+
Sbjct: 668 LFDQME-----QRNTALWNSILAGYANKGLKKESFNHFLEM-----LESDIEY 710
Score = 230 bits (586), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 137/491 (27%), Positives = 261/491 (53%), Gaps = 14/491 (2%)
Query: 29 NSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKC---SDFVSSR 85
N + +++ C + NS GK +H+ ++ G+ DA++ T ++ +Y++ D +R
Sbjct: 70 NPLPYSSLIQDCIDSNSFQRGKSIHTQMISNGYNPDAYLMTKILMLYARSGCLDDLCYAR 129
Query: 86 KVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCSF 145
K+ +EMP R ++ +WN++I A++R E + + M G TF SV+ C
Sbjct: 130 KLFEEMPER--NLTAWNTMILAYARVDDYMEVLRLYGRMRGSGNFSDKFTFPSVIKACIA 187
Query: 146 RQGI----SMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTT 201
+ + + V K GL N + + +++ YA+FG +++A + DEI TS+V+W
Sbjct: 188 MEDMGGVRQLQSSVVKAGL-NCNLFVGGALVDGYARFGWMDDAVTSLDEIEGTSVVTWNA 246
Query: 202 IIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSG 261
+I GYV + + EA+G+ ++M ++ V PD F + + C + + +HS L+ G
Sbjct: 247 VIAGYVKILSWEEAWGIFDRMLKIGVCPDNFTFASALRVCGALRSRDGGKQVHSKLIACG 306
Query: 262 YNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFK 321
+ + + N L+ MY KC D E +VFD + E++ W S+I AQ G+ ++A+ LF
Sbjct: 307 FKGDTFVGNALIDMYAKCDDEESCLKVFDEMGERNQVTWNSIISAEAQFGHFNDALVLFL 366
Query: 322 RLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCG 381
R+ ++ + N L + L A A L + KG+E+ ++V N L S+ + ++L+ M+SKCG
Sbjct: 367 RMQESGYKSNRFNLGSILMASAGLADIGKGRELHGHLVRNLLNSDIILGSALVDMYSKCG 426
Query: 382 RINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSIL 441
+ +A +VF + +++ ++A++ GY G ++AL L++ MQ +G++PD +T++L
Sbjct: 427 MVEEAHQVFRSLLERNEVSYNALLAGYVQEGKAEEALELYHDMQSEDGIQPDQFTFTTLL 486
Query: 442 SACSHSGMVDDGLSFFKSM-QSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEV 500
+ C++ + G + ++N +E LV + GR + A + + M E
Sbjct: 487 TLCANQRNDNQGRQIHAHLIRANITKNIIVETE--LVHMYSECGRLNYAKEIFNRM-AER 543
Query: 501 QAQVWAPLLSA 511
A W ++
Sbjct: 544 NAYSWNSMIEG 554
Score = 228 bits (581), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 142/486 (29%), Positives = 253/486 (52%), Gaps = 10/486 (2%)
Query: 11 FEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTG 70
+ E L Y M +G + FTFP V+KAC + + +++ S V+K G + FV
Sbjct: 156 YMEVLRLYGRMRGSGNFSDKFTFPSVIKACIAMEDMGGVRQLQSSVVKAGLNCNLFVGGA 215
Query: 71 LIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLE 130
L+D Y++ + LDE + SVV+WN++I+ + + +EA + M +G+
Sbjct: 216 LVDGYARFGWMDDAVTSLDE--IEGTSVVTWNAVIAGYVKILSWEEAWGIFDRMLKIGVC 273
Query: 131 LSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARS 186
TF S + C S G +H + G + + N+++ MYAK
Sbjct: 274 PDNFTFASALRVCGALRSRDGGKQVHSKLIACGFKGDTF-VGNALIDMYAKCDDEESCLK 332
Query: 187 IFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGN 246
+FDE+GE + V+W +II G+ N+A L +M+ + ++++ A + +
Sbjct: 333 VFDEMGERNQVTWNSIISAEAQFGHFNDALVLFLRMQESGYKSNRFNLGSILMASAGLAD 392
Query: 247 LFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGG 306
+ +H L+++ N++ L + LV MY+KCG +E A +VF ++LE++ + +++ G
Sbjct: 393 IGKGRELHGHLVRNLLNSDIILGSALVDMYSKCGMVEEAHQVFRSLLERNEVSYNALLAG 452
Query: 307 YAQLGYPSEAVNLFKRLL-KTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLES 365
Y Q G EA+ L+ + + ++P++ T T L+ CA + ++G++I +++ +
Sbjct: 453 YVQEGKAEEALELYHDMQSEDGIQPDQFTFTTLLTLCANQRNDNQGRQIHAHLIRANITK 512
Query: 366 NRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQ 425
N V+T L+HM+S+CGR+N AKE+F R+ +++ W++MI GY +G +AL LF +MQ
Sbjct: 513 NIIVETELVHMYSECGRLNYAKEIFNRMAERNAYSWNSMIEGYQQNGETQEALRLFKQMQ 572
Query: 426 HVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGR 485
+ G+KPD +S+LS+C G + N E I + LVD+ + G
Sbjct: 573 -LNGIKPDCFSLSSMLSSCVSLSDSQKGRELHNFIVRNTMEEEGILQ-VVLVDMYAKCGS 630
Query: 486 FDLALK 491
D A K
Sbjct: 631 MDYAWK 636
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 86/344 (25%), Positives = 161/344 (46%), Gaps = 41/344 (11%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI NG +E L + M G+ + F+ +L +C +++ G+ +H+ +++
Sbjct: 551 MIEGYQQNGETQEALRLFKQMQLNGIKPDCFSLSSMLSSCVSLSDSQKGRELHNFIVRNT 610
Query: 61 FQQDAFVQTGLIDMYSKC-------------------------SDFVSS------RKVLD 89
+++ +Q L+DMY+KC S FV+S + + D
Sbjct: 611 MEEEGILQVVLVDMYAKCGSMDYAWKVYDQTIKKDVILNNVMVSAFVNSGRANDAKNLFD 670
Query: 90 EMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCS----F 145
+M R+ WNSI++ ++ L E+ EM +E T V++V+ CS
Sbjct: 671 QM--EQRNTALWNSILAGYANKGLKKESFNHFLEMLESDIEYDVLTMVTIVNLCSSLPAL 728
Query: 146 RQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGG 205
G +H + K G +N + L +++ MY+K G + +AR++FD + +IVSW +I G
Sbjct: 729 EHGDQLHSLIIKKGFVNCSVVLETALVDMYSKCGAITKARTVFDNMNGKNIVSWNAMISG 788
Query: 206 YVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNE 265
Y G EA L +M + + P+ V FL ++ C+ G + L + + ++ YN E
Sbjct: 789 YSKHGCSKEALILYEEMPKKGMYPNEVTFLAILSACSHTGLVEEGLRIFT-SMQEDYNIE 847
Query: 266 DPLDNL--LVSMYTKCGDLELARRVFDAV-LEKSVFLWTSMIGG 306
++ +V + + G LE A+ + + +E V W +++G
Sbjct: 848 AKAEHYTCMVDLLGRAGRLEDAKEFVEKMPIEPEVSTWGALLGA 891
>gi|218195439|gb|EEC77866.1| hypothetical protein OsI_17132 [Oryza sativa Indica Group]
Length = 865
Score = 369 bits (948), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 231/671 (34%), Positives = 347/671 (51%), Gaps = 68/671 (10%)
Query: 11 FEETLSTYSSMLQTGVH-GNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQT 69
F + L T+ SM ++G N+FTF V+K+C + ++ K F D V+T
Sbjct: 118 FLDGLETFVSMHRSGDSLPNAFTFCCVMKSCGALGCRELAPQLLGLFWKFDFWGDPDVET 177
Query: 70 GLIDMYSKCS--DFVSSRKVLDEMPVRL---------------------------RSVVS 100
L+DM+ +C DF S E P R VVS
Sbjct: 178 ALVDMFVRCGYVDFASRLFSQIERPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVS 237
Query: 101 WNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGC----SFRQGISMHCCVY 156
WN +I+A S++ EA+ ++ EM G+ L ++T+ S ++ C S G +H V
Sbjct: 238 WNMMIAALSQSGRVREALGLVVEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVI 297
Query: 157 KLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAF 216
+ L + +A++++ +YAK G EA+ +F+ + + + VSWT +IGG + +++
Sbjct: 298 R-SLPQIDPYVASALIELYAKCGSFKEAKRVFNSLQDRNSVSWTVLIGGSLQYECFSKSV 356
Query: 217 GLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMY 276
L NQMR + D LI GC +L L +HSL LKSG+N + N L+S+Y
Sbjct: 357 ELFNQMRAELMAIDQFALATLISGCFNRMDLCLGRQLHSLCLKSGHNRAIVVSNSLISLY 416
Query: 277 TKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFK--------------- 321
KCGDL+ A VF ++ E+ + WTSMI Y+Q+G +A F
Sbjct: 417 AKCGDLQNAEFVFSSMSERDIVSWTSMITAYSQIGNIIKAREFFDGMDTRNAITWNAMLG 476
Query: 322 -----------------RLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLE 364
L + V P+ T T CA++G+ G +I + V GL
Sbjct: 477 AYIQHGAEEDGLKMYSAMLSQKDVTPDWVTYVTLFRGCADIGANKLGDQIIGHTVKAGLI 536
Query: 365 SNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKM 424
N V + I M+SKCGRI++A+++F+ + KD+ W+AMI GY+ HGMG QA F M
Sbjct: 537 LNVSVANAAITMYSKCGRISEAQKLFDLLNGKDVVSWNAMITGYSQHGMGKQAAKTFDDM 596
Query: 425 QHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAG 484
+G KPD + Y ++LS CSHSG+V +G +F M GI P +EH+ C+VDLLGRAG
Sbjct: 597 LS-KGAKPDYISYVAVLSGCSHSGLVQEGKLYFDMMTRVHGISPGLEHFSCMVDLLGRAG 655
Query: 485 RFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMAN 544
A I +MP++ A+VW LLSAC H N EL E AAK++ L+ +G+Y+L+A
Sbjct: 656 HLTEAKDLIDKMPMKPTAEVWGALLSACKIHGNDELAELAAKHVFELDSPDSGSYMLLAK 715
Query: 545 LFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKE 604
+++ AG ++A R LM D+ + K PG+S +E++ V VF A D SH + IR L E
Sbjct: 716 IYSDAGKSDDSAQVRKLMRDKGIKKNPGYSWMEVENKVHVFKADDVSHPQVIAIRNKLDE 775
Query: 605 LHIKLLEAGYI 615
L K+ GY+
Sbjct: 776 LMEKIAHLGYV 786
Score = 188 bits (478), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 135/500 (27%), Positives = 238/500 (47%), Gaps = 45/500 (9%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI + +G E L M + GV +S T+ L ACA + S+ GK++H+ V++
Sbjct: 241 MIAALSQSGRVREALGLVVEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSL 300
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
Q D +V + LI++Y+KC F +++V + + + R+ VSW +I + +++ +
Sbjct: 301 PQIDPYVASALIELYAKCGSFKEAKRVFNSL--QDRNSVSWTVLIGGSLQYECFSKSVEL 358
Query: 121 LKEMWVLGLELSASTFVSVVSGCSFRQ----GISMHCCVYKLGLLNNEIPLANSVMSMYA 176
+M + + +++SGC R G +H K G N I ++NS++S+YA
Sbjct: 359 FNQMRAELMAIDQFALATLISGCFNRMDLCLGRQLHSLCLKSG-HNRAIVVSNSLISLYA 417
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQM-------------- 222
K G + A +F + E IVSWT++I Y +GN+ +A + M
Sbjct: 418 KCGDLQNAEFVFSSMSERDIVSWTSMITAYSQIGNIIKAREFFDGMDTRNAITWNAMLGA 477
Query: 223 ------------------RRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNN 264
+ VTPD V ++ L GCA +G L + +K+G
Sbjct: 478 YIQHGAEEDGLKMYSAMLSQKDVTPDWVTYVTLFRGCADIGANKLGDQIIGHTVKAGLIL 537
Query: 265 EDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLL 324
+ N ++MY+KCG + A+++FD + K V W +MI GY+Q G +A F +L
Sbjct: 538 NVSVANAAITMYSKCGRISEAQKLFDLLNGKDVVSWNAMITGYSQHGMGKQAAKTFDDML 597
Query: 325 KTSVRPNEATLATTLSACAELGSLSKGKEIEEYIV-LNGLESNRQVQTSLIHMFSKCGRI 383
+P+ + LS C+ G + +GK + + ++G+ + + ++ + + G +
Sbjct: 598 SKGAKPDYISYVAVLSGCSHSGLVQEGKLYFDMMTRVHGISPGLEHFSCMVDLLGRAGHL 657
Query: 384 NKAKEVFERVPDKDLA-VWSAMINGYAIHGMGDQALNLFYKMQHVEGL-KPDAVVYTSIL 441
+AK++ +++P K A VW A+++ IHG D+ L K HV L PD+ Y +
Sbjct: 658 TEAKDLIDKMPMKPTAEVWGALLSACKIHG-NDELAELAAK--HVFELDSPDSGSYMLLA 714
Query: 442 SACSHSGMVDDGLSFFKSMQ 461
S +G DD K M+
Sbjct: 715 KIYSDAGKSDDSAQVRKLMR 734
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 124/524 (23%), Positives = 222/524 (42%), Gaps = 108/524 (20%)
Query: 37 LKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVL-------- 88
L++C + ++ + +H ++ VG F+Q L+ Y C +R++L
Sbjct: 11 LRSCGSRGALAGARALHGRLVTVGLASAVFLQNTLLHAYFSCGALSDARRLLRADIKEPN 70
Query: 89 ------------------------DEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEM 124
D MP R V SWN+++S + +A
Sbjct: 71 VITHNIMMNGYAKQGSLSDAEELFDRMP--RRDVASWNTLMSGYFQA-----------RR 117
Query: 125 WVLGLELSASTFVSV-VSGCSFRQGISMHCCVYK--------------LGLL-------- 161
++ GLE TFVS+ SG S + CCV K LGL
Sbjct: 118 FLDGLE----TFVSMHRSGDSLPNAFTF-CCVMKSCGALGCRELAPQLLGLFWKFDFWGD 172
Query: 162 ----------------------------NNEIPLANSVMSMYAKFGKVNEARSIFDEIGE 193
I NS+++ YAK ++ A F+++ E
Sbjct: 173 PDVETALVDMFVRCGYVDFASRLFSQIERPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAE 232
Query: 194 TSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSM 253
+VSW +I G V EA GL +M R V D + + + CA++ +L +
Sbjct: 233 RDVVSWNMMIAALSQSGRVREALGLVVEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQL 292
Query: 254 HSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYP 313
H+ +++S + + + L+ +Y KCG + A+RVF+++ +++ WT +IGG Q
Sbjct: 293 HAKVIRSLPQIDPYVASALIELYAKCGSFKEAKRVFNSLQDRNSVSWTVLIGGSLQYECF 352
Query: 314 SEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSL 373
S++V LF ++ + ++ LAT +S C L G+++ + +G V SL
Sbjct: 353 SKSVELFNQMRAELMAIDQFALATLISGCFNRMDLCLGRQLHSLCLKSGHNRAIVVSNSL 412
Query: 374 IHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKP- 432
I +++KCG + A+ VF + ++D+ W++MI Y+ Q N+ + +G+
Sbjct: 413 ISLYAKCGDLQNAEFVFSSMSERDIVSWTSMITAYS------QIGNIIKAREFFDGMDTR 466
Query: 433 DAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCL 476
+A+ + ++L A G +DGL + +M S + P Y+ L
Sbjct: 467 NAITWNAMLGAYIQHGAEEDGLKMYSAMLSQKDVTPDWVTYVTL 510
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 73/157 (46%), Gaps = 6/157 (3%)
Query: 334 TLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFE-R 392
LA L +C G+L+ + + +V GL S +Q +L+H + CG ++ A+ +
Sbjct: 6 ALADALRSCGSRGALAGARALHGRLVTVGLASAVFLQNTLLHAYFSCGALSDARRLLRAD 65
Query: 393 VPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDD 452
+ + ++ + M+NGYA G A LF +M + D + +++S + D
Sbjct: 66 IKEPNVITHNIMMNGYAKQGSLSDAEELFDRMP-----RRDVASWNTLMSGYFQARRFLD 120
Query: 453 GLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLA 489
GL F SM + P+ + C++ G G +LA
Sbjct: 121 GLETFVSMHRSGDSLPNAFTFCCVMKSCGALGCRELA 157
>gi|30694644|ref|NP_191302.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218525905|sp|Q7Y211.2|PP285_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g57430, chloroplastic; Flags: Precursor
gi|332646133|gb|AEE79654.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 890
Score = 369 bits (948), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 209/634 (32%), Positives = 355/634 (55%), Gaps = 30/634 (4%)
Query: 11 FEETLSTYSSMLQTGVHGNSFTFPLVLKACANI---NSIWDGKRVHSHVLKVGFQQDAFV 67
+E L + ML V +SFT V+ AC+N+ + GK+VH++ L+ G + ++F+
Sbjct: 180 WEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKG-ELNSFI 238
Query: 68 QTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLND---EAILVLKEM 124
L+ MY K SS+ +L R +V+WN+++S+ C N+ EA+ L+EM
Sbjct: 239 INTLVAMYGKLGKLASSKVLLGSFGGR--DLVTWNTVLSS---LCQNEQLLEALEYLREM 293
Query: 125 WVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGK 180
+ G+E T SV+ CS R G +H K G L+ + ++++ MY +
Sbjct: 294 VLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQ 353
Query: 181 VNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMS-VTPDLVVFLNLIL 239
V R +FD + + I W +I GY + EA L M + + + ++
Sbjct: 354 VLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVP 413
Query: 240 GCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFL 299
C + G ++H ++K G + + + N L+ MY++ G +++A R+F + ++ +
Sbjct: 414 ACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVT 473
Query: 300 WTSMIGGYAQLGYPSEAVNLFKRLL-----------KTSVRPNEATLATTLSACAELGSL 348
W +MI GY + +A+ L ++ + S++PN TL T L +CA L +L
Sbjct: 474 WNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSAL 533
Query: 349 SKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGY 408
+KGKEI Y + N L ++ V ++L+ M++KCG + +++VF+++P K++ W+ +I Y
Sbjct: 534 AKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAY 593
Query: 409 AIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEP 468
+HG G +A++L +M V+G+KP+ V + S+ +ACSHSGMVD+GL F M+ ++G+EP
Sbjct: 594 GMHGNGQEAIDLL-RMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEP 652
Query: 469 SIEHYLCLVDLLGRAGRFDLALKTIHEMPVEV-QAQVWAPLLSACMKHHNVELGEYAAKN 527
S +HY C+VDLLGRAGR A + ++ MP + +A W+ LL A H+N+E+GE AA+N
Sbjct: 653 SSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQN 712
Query: 528 LLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVA 587
L+ L P +Y+L+AN+++SAG+W +A R M ++ + KEPG S +E V FVA
Sbjct: 713 LIQLEPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFVA 772
Query: 588 GDRSHHLSVDIRKTLKELHIKLLEAGYIAEADIV 621
GD SH S + L+ L ++ + GY+ + V
Sbjct: 773 GDSSHPQSEKLSGYLETLWERMRKEGYVPDTSCV 806
Score = 241 bits (616), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 153/536 (28%), Positives = 278/536 (51%), Gaps = 24/536 (4%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
++R+ + E + TY M+ G+ +++ FP +LKA A++ + GK++H+HV K G
Sbjct: 68 LLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFG 127
Query: 61 FQQDAF-VQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAIL 119
+ D+ V L+++Y KC DF + KV D + R+ VSWNS+IS+ + A+
Sbjct: 128 YGVDSVTVANTLVNLYRKCGDFGAVYKVFDR--ISERNQVSWNSLISSLCSFEKWEMALE 185
Query: 120 VLKEMWVLGLELSASTFVSVVSGCS---FRQGISMHCCVYKLGLLNNEIP--LANSVMSM 174
+ M +E S+ T VSVV+ CS +G+ M V+ GL E+ + N++++M
Sbjct: 186 AFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELNSFIINTLVAM 245
Query: 175 YAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVF 234
Y K GK+ ++ + G +V+W T++ + EA +M V PD
Sbjct: 246 YGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTI 305
Query: 235 LNLILGCAQVGNLFLALSMHSLLLKSGYNNEDP-LDNLLVSMYTKCGDLELARRVFDAVL 293
+++ C+ + L +H+ LK+G +E+ + + LV MY C + RRVFD +
Sbjct: 306 SSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMF 365
Query: 294 EKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTS-VRPNEATLATTLSACAELGSLSKGK 352
++ + LW +MI GY+Q + EA+ LF + +++ + N T+A + AC G+ S+ +
Sbjct: 366 DRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKE 425
Query: 353 EIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHG 412
I ++V GL+ +R VQ +L+ M+S+ G+I+ A +F ++ D+DL W+ MI GY
Sbjct: 426 AIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSE 485
Query: 413 MGDQALNLFYKMQHVE----------GLKPDAVVYTSILSACSHSGMVDDGLSFFK-SMQ 461
+ AL L +KMQ++E LKP+++ +IL +C+ + G +++
Sbjct: 486 HHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIK 545
Query: 462 SNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHN 517
+N + ++ LVD+ + G ++ K ++P + W ++ A H N
Sbjct: 546 NNLATDVAVGS--ALVDMYAKCGCLQMSRKVFDQIP-QKNVITWNVIIMAYGMHGN 598
Score = 151 bits (382), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 107/420 (25%), Positives = 199/420 (47%), Gaps = 32/420 (7%)
Query: 96 RSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCSFRQ----GISM 151
RS W ++ + R+ L EA+L +M VLG++ F +++ + Q G +
Sbjct: 60 RSPEWWIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQI 119
Query: 152 HCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGN 211
H VYK G + + +AN+++++Y K G +FD I E + VSW ++I +
Sbjct: 120 HAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEK 179
Query: 212 VNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVG---NLFLALSMHSLLLKSGYNNEDPL 268
A M +V P ++++ C+ + L + +H+ L+ G N +
Sbjct: 180 WEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELNSFII 239
Query: 269 DNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSV 328
N LV+MY K G L ++ + + + + W +++ Q EA+ + ++ V
Sbjct: 240 -NTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGV 298
Query: 329 RPNEATLATTLSACAELGSLSKGKEIEEYIVLNG-LESNRQVQTSLIHMFSKCGRINKAK 387
P+E T+++ L AC+ L L GKE+ Y + NG L+ N V ++L+ M+ C ++ +
Sbjct: 299 EPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGR 358
Query: 388 EVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHS 447
VF+ + D+ + +W+AMI GY+ + +AL LF M+ GL ++ ++ AC S
Sbjct: 359 RVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRS 418
Query: 448 G-----------MVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEM 496
G +V GL + +Q+ L+D+ R G+ D+A++ +M
Sbjct: 419 GAFSRKEAIHGFVVKRGLDRDRFVQNT------------LMDMYSRLGKIDIAMRIFGKM 466
>gi|30794008|gb|AAP40452.1| unknown protein [Arabidopsis thaliana]
Length = 890
Score = 369 bits (948), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 209/634 (32%), Positives = 355/634 (55%), Gaps = 30/634 (4%)
Query: 11 FEETLSTYSSMLQTGVHGNSFTFPLVLKACANI---NSIWDGKRVHSHVLKVGFQQDAFV 67
+E L + ML V +SFT V+ AC+N+ + GK+VH++ L+ G + ++F+
Sbjct: 180 WEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKG-ELNSFI 238
Query: 68 QTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLND---EAILVLKEM 124
L+ MY K SS+ +L R +V+WN+++S+ C N+ EA+ L+EM
Sbjct: 239 INTLVAMYGKLGKLASSKVLLGSFGGR--DLVTWNTVLSS---LCQNEQLLEALEYLREM 293
Query: 125 WVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGK 180
+ G+E T SV+ CS R G +H K G L+ + ++++ MY +
Sbjct: 294 VLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQ 353
Query: 181 VNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMS-VTPDLVVFLNLIL 239
V R +FD + + I W +I GY + EA L M + + + ++
Sbjct: 354 VLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVP 413
Query: 240 GCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFL 299
C + G ++H ++K G + + + N L+ MY++ G +++A R+F + ++ +
Sbjct: 414 ACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVT 473
Query: 300 WTSMIGGYAQLGYPSEAVNLFKRLL-----------KTSVRPNEATLATTLSACAELGSL 348
W +MI GY + +A+ L ++ + S++PN TL T L +CA L +L
Sbjct: 474 WNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSAL 533
Query: 349 SKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGY 408
+KGKEI Y + N L ++ V ++L+ M++KCG + +++VF+++P K++ W+ +I Y
Sbjct: 534 AKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAY 593
Query: 409 AIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEP 468
+HG G +A++L +M V+G+KP+ V + S+ +ACSHSGMVD+GL F M+ ++G+EP
Sbjct: 594 GMHGNGQEAIDLL-RMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEP 652
Query: 469 SIEHYLCLVDLLGRAGRFDLALKTIHEMPVEV-QAQVWAPLLSACMKHHNVELGEYAAKN 527
S +HY C+VDLLGRAGR A + ++ MP + +A W+ LL A H+N+E+GE AA+N
Sbjct: 653 SSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQN 712
Query: 528 LLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVA 587
L+ L P +Y+L+AN+++SAG+W +A R M ++ + KEPG S +E V FVA
Sbjct: 713 LIQLEPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFVA 772
Query: 588 GDRSHHLSVDIRKTLKELHIKLLEAGYIAEADIV 621
GD SH S + L+ L ++ + GY+ + V
Sbjct: 773 GDSSHPQSEKLSGYLETLWERMRKEGYVPDTSCV 806
Score = 241 bits (616), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 153/536 (28%), Positives = 278/536 (51%), Gaps = 24/536 (4%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
++R+ + E + TY M+ G+ +++ FP +LKA A++ + GK++H+HV K G
Sbjct: 68 LLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFG 127
Query: 61 FQQDAF-VQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAIL 119
+ D+ V L+++Y KC DF + KV D + R+ VSWNS+IS+ + A+
Sbjct: 128 YGVDSVTVANTLVNLYRKCGDFGAVYKVFDR--ISERNQVSWNSLISSLCSFEKWEMALE 185
Query: 120 VLKEMWVLGLELSASTFVSVVSGCS---FRQGISMHCCVYKLGLLNNEIP--LANSVMSM 174
+ M +E S+ T VSVV+ CS +G+ M V+ GL E+ + N++++M
Sbjct: 186 AFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELNSFIINTLVAM 245
Query: 175 YAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVF 234
Y K GK+ ++ + G +V+W T++ + EA +M V PD
Sbjct: 246 YGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTI 305
Query: 235 LNLILGCAQVGNLFLALSMHSLLLKSGYNNEDP-LDNLLVSMYTKCGDLELARRVFDAVL 293
+++ C+ + L +H+ LK+G +E+ + + LV MY C + RRVFD +
Sbjct: 306 SSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMF 365
Query: 294 EKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTS-VRPNEATLATTLSACAELGSLSKGK 352
++ + LW +MI GY+Q + EA+ LF + +++ + N T+A + AC G+ S+ +
Sbjct: 366 DRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKE 425
Query: 353 EIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHG 412
I ++V GL+ +R VQ +L+ M+S+ G+I+ A +F ++ D+DL W+ MI GY
Sbjct: 426 AIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSE 485
Query: 413 MGDQALNLFYKMQHVE----------GLKPDAVVYTSILSACSHSGMVDDGLSFFK-SMQ 461
+ AL L +KMQ++E LKP+++ +IL +C+ + G +++
Sbjct: 486 HHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIK 545
Query: 462 SNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHN 517
+N + ++ LVD+ + G ++ K ++P + W ++ A H N
Sbjct: 546 NNLATDVAVGS--ALVDMYAKCGCLQMSRKVFDQIP-QKNVITWNVIIMAYGMHGN 598
Score = 151 bits (382), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 107/420 (25%), Positives = 199/420 (47%), Gaps = 32/420 (7%)
Query: 96 RSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCSFRQ----GISM 151
RS W ++ + R+ L EA+L +M VLG++ F +++ + Q G +
Sbjct: 60 RSPEWWIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQI 119
Query: 152 HCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGN 211
H VYK G + + +AN+++++Y K G +FD I E + VSW ++I +
Sbjct: 120 HAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEK 179
Query: 212 VNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVG---NLFLALSMHSLLLKSGYNNEDPL 268
A M +V P ++++ C+ + L + +H+ L+ G N +
Sbjct: 180 WEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELNSFII 239
Query: 269 DNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSV 328
N LV+MY K G L ++ + + + + W +++ Q EA+ + ++ V
Sbjct: 240 -NTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGV 298
Query: 329 RPNEATLATTLSACAELGSLSKGKEIEEYIVLNG-LESNRQVQTSLIHMFSKCGRINKAK 387
P+E T+++ L AC+ L L GKE+ Y + NG L+ N V ++L+ M+ C ++ +
Sbjct: 299 EPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGR 358
Query: 388 EVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHS 447
VF+ + D+ + +W+AMI GY+ + +AL LF M+ GL ++ ++ AC S
Sbjct: 359 RVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRS 418
Query: 448 G-----------MVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEM 496
G +V GL + +Q+ L+D+ R G+ D+A++ +M
Sbjct: 419 GAFSRKEAIHGFVVKRGLDRDRFVQNT------------LMDMYSRLGKIDIAMRIFGKM 466
>gi|356514095|ref|XP_003525742.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g01580-like [Glycine max]
Length = 700
Score = 369 bits (947), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 204/622 (32%), Positives = 335/622 (53%), Gaps = 11/622 (1%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGV---HGNSFTFPLVLKACANINSIWDGKRVHSHVL 57
++R+ G + ETLS + M + +++T + LK+C+ + + GK +H +
Sbjct: 73 LLRSYFLEGKWVETLSLFHQMNADAITEERPDNYTVSIALKSCSGLQKLELGKMIHGFLK 132
Query: 58 KVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEA 117
K D FV + LI++YSKC + KV E P + VV W SII+ + + + A
Sbjct: 133 KKKIDNDMFVGSALIELYSKCGQMNDAVKVFTEYPKQ--DVVLWTSIITGYEQNGSPELA 190
Query: 118 ILVLKEMWVL-GLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVM 172
+ M VL + T VS S C+ F G S+H V + G + ++ LANS++
Sbjct: 191 LAFFSRMVVLEQVSPDPVTLVSAASACAQLSDFNLGRSVHGFVKRRGF-DTKLCLANSIL 249
Query: 173 SMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLV 232
++Y K G + A ++F E+ I+SW++++ Y + G A L N+M + + V
Sbjct: 250 NLYGKTGSIRSAANLFREMPYKDIISWSSMVACYADNGAETNALNLFNEMIDKRIELNRV 309
Query: 233 VFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAV 292
++ + CA NL +H L + G+ + + L+ MY KC + A +F+ +
Sbjct: 310 TVISALRACASSSNLEEGKHIHKLAVNYGFELDITVSTALMDMYMKCFSPKNAIDLFNRM 369
Query: 293 LEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGK 352
+K V W + GYA++G +++ +F +L RP+ L L+A +ELG + +
Sbjct: 370 PKKDVVSWAVLFSGYAEIGMAHKSLGVFCNMLSYGTRPDAIALVKILAASSELGIVQQAL 429
Query: 353 EIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHG 412
+ ++ +G ++N + SLI +++KC I+ A +VF+ + KD+ WS++I Y HG
Sbjct: 430 CLHAFVSKSGFDNNEFIGASLIELYAKCSSIDNANKVFKGMRRKDVVTWSSIIAAYGFHG 489
Query: 413 MGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEH 472
G++AL LFY+M + +KP+ V + SILSACSH+G++++G+ F M + + + P+ EH
Sbjct: 490 QGEEALKLFYQMSNHSDVKPNDVTFVSILSACSHAGLIEEGIKMFHVMVNEYQLMPNTEH 549
Query: 473 YLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLN 532
Y +VDLLGR G D AL I+EMP++ VW LL AC H N+++GE AA NL L+
Sbjct: 550 YGIMVDLLGRMGELDKALDMINEMPMQAGPHVWGALLGACRIHQNIKIGELAALNLFLLD 609
Query: 533 PGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSH 592
P G Y L++N++ W +AA R L+ + R K G S VEI V F+A DR H
Sbjct: 610 PNHAGYYTLLSNIYCVDKNWHDAAKLRTLIKENRFKKIVGQSMVEIKNEVHSFIASDRFH 669
Query: 593 HLSVDIRKTLKELHIKLLEAGY 614
S I L++L ++ E GY
Sbjct: 670 GESDQIYGMLRKLDARMKEEGY 691
Score = 195 bits (496), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 133/483 (27%), Positives = 246/483 (50%), Gaps = 15/483 (3%)
Query: 36 VLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRL 95
+L+ C + SI ++HS LKVG D+FV T L +Y++ + + K+ +E P
Sbjct: 10 LLETCCSKISI---PQLHSQCLKVGLAHDSFVVTKLNVLYARYASLCHAHKLFEETPC-- 64
Query: 96 RSVVSWNSIISAHSRACLNDEAILVLKEMWVLGL--ELSASTFVSV-VSGCSFRQGISMH 152
++V WN+++ ++ E + + +M + E + VS+ + CS Q + +
Sbjct: 65 KTVYLWNALLRSYFLEGKWVETLSLFHQMNADAITEERPDNYTVSIALKSCSGLQKLELG 124
Query: 153 CCVY---KLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNV 209
++ K ++N++ + ++++ +Y+K G++N+A +F E + +V WT+II GY
Sbjct: 125 KMIHGFLKKKKIDNDMFVGSALIELYSKCGQMNDAVKVFTEYPKQDVVLWTSIITGYEQN 184
Query: 210 GNVNEAFGLCNQMRRM-SVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPL 268
G+ A ++M + V+PD V ++ CAQ+ + L S+H + + G++ + L
Sbjct: 185 GSPELALAFFSRMVVLEQVSPDPVTLVSAASACAQLSDFNLGRSVHGFVKRRGFDTKLCL 244
Query: 269 DNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSV 328
N ++++Y K G + A +F + K + W+SM+ YA G + A+NLF ++ +
Sbjct: 245 ANSILNLYGKTGSIRSAANLFREMPYKDIISWSSMVACYADNGAETNALNLFNEMIDKRI 304
Query: 329 RPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKE 388
N T+ + L ACA +L +GK I + V G E + V T+L+ M+ KC A +
Sbjct: 305 ELNRVTVISALRACASSSNLEEGKHIHKLAVNYGFELDITVSTALMDMYMKCFSPKNAID 364
Query: 389 VFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSG 448
+F R+P KD+ W+ + +GYA GM ++L +F M G +PDA+ IL+A S G
Sbjct: 365 LFNRMPKKDVVSWAVLFSGYAEIGMAHKSLGVFCNMLSY-GTRPDAIALVKILAASSELG 423
Query: 449 MVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPL 508
+V L + S G + + L++L + D A K M + W+ +
Sbjct: 424 IVQQALC-LHAFVSKSGFDNNEFIGASLIELYAKCSSIDNANKVFKGMRRK-DVVTWSSI 481
Query: 509 LSA 511
++A
Sbjct: 482 IAA 484
Score = 47.0 bits (110), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 37/166 (22%), Positives = 79/166 (47%), Gaps = 12/166 (7%)
Query: 362 GLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLF 421
GL + V T L ++++ + A ++FE P K + +W+A++ Y + G + L+LF
Sbjct: 31 GLAHDSFVVTKLNVLYARYASLCHAHKLFEETPCKTVYLWNALLRSYFLEGKWVETLSLF 90
Query: 422 YKM--QHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYL----C 475
++M + +PD + L +CS ++ G M F + I++ +
Sbjct: 91 HQMNADAITEERPDNYTVSIALKSCSGLQKLELG-----KMIHGFLKKKKIDNDMFVGSA 145
Query: 476 LVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELG 521
L++L + G+ + A+K E P + +W +++ ++ + EL
Sbjct: 146 LIELYSKCGQMNDAVKVFTEYPKQ-DVVLWTSIITGYEQNGSPELA 190
>gi|115466812|ref|NP_001057005.1| Os06g0185800 [Oryza sativa Japonica Group]
gi|55773756|dbj|BAD72439.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113595045|dbj|BAF18919.1| Os06g0185800 [Oryza sativa Japonica Group]
gi|125596288|gb|EAZ36068.1| hypothetical protein OsJ_20378 [Oryza sativa Japonica Group]
Length = 787
Score = 369 bits (947), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 207/562 (36%), Positives = 320/562 (56%), Gaps = 14/562 (2%)
Query: 64 DAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKE 123
D FV + L +Y S +RKV D +P V WN++++ S EA+
Sbjct: 148 DTFVASALAKLYFVLSRVDHARKVFDTVPSP--DTVLWNTLLAGLS----GSEAVESFAR 201
Query: 124 MWVLG-LELSASTFVSVVSGCSFRQGISMHCCVY----KLGLLNNEIPLANSVMSMYAKF 178
M G + A+T SV+ + ++M CV+ K GL +E L ++S+Y+K
Sbjct: 202 MVCDGSVRPDATTLASVLPAAAEVADVTMGRCVHSFAEKCGLAEHEHVL-TGLISLYSKC 260
Query: 179 GKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLI 238
G V AR +FD + + +V++ +I GY G V + L ++ + + P+ + LI
Sbjct: 261 GDVESARCLFDMMEKPDLVAYNALISGYSVNGMVGSSVNLFTELMTLGLWPNSSTLVALI 320
Query: 239 LGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVF 298
+ G+ LA +H +LKSG+ P+ + +++ + D+E AR+ FD + EK++
Sbjct: 321 PVHSPFGHDLLAQCLHGFVLKSGFTANSPVSTAITTLHCRLNDMESARKAFDTMPEKTME 380
Query: 299 LWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYI 358
W +MI GYAQ G AV LF++++K +VRPN T+++TLSACA+LG+LS GK + I
Sbjct: 381 SWNAMISGYAQNGLTEMAVALFEQMVKLNVRPNPITISSTLSACAQLGALSLGKWLHRII 440
Query: 359 VLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQAL 418
LE N V T+LI M++KCG I++A+ +F + +K++ W+AMI GY +HG G +AL
Sbjct: 441 TEEDLEPNVYVMTALIDMYAKCGSISEARRIFNTMDNKNVVSWNAMIAGYGLHGQGAEAL 500
Query: 419 NLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVD 478
L+ M L P + + S+L ACSH G+V++G F+SM ++ I P IEH C+VD
Sbjct: 501 KLYKDMLDAH-LLPTSATFLSVLYACSHGGLVEEGWKVFRSMTDDYAINPGIEHCTCMVD 559
Query: 479 LLGRAGRFDLALKTIHEMPVE-VQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTG 537
LLGRAG+ A + I E P V VW LL ACM H + +L + A++ L L+P ++G
Sbjct: 560 LLGRAGQLKEAFELISEFPKSAVGPGVWGALLGACMVHKDSDLAKLASQKLFELDPENSG 619
Query: 538 NYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVD 597
Y+L++NL TS + EAA R R+L K PG++ +EI VF+AGDR+H S
Sbjct: 620 YYVLLSNLHTSKKQYSEAAVVRQEAKSRKLVKTPGYTLIEIGNKPHVFMAGDRAHPQSEA 679
Query: 598 IRKTLKELHIKLLEAGYIAEAD 619
I L++L K++EAGY E +
Sbjct: 680 IYSYLEKLTAKMIEAGYRPETE 701
Score = 182 bits (462), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 119/420 (28%), Positives = 210/420 (50%), Gaps = 19/420 (4%)
Query: 10 SFEETLSTYSSMLQTG-VHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQ 68
S E + +++ M+ G V ++ T VL A A + + G+ VHS K G + V
Sbjct: 191 SGSEAVESFARMVCDGSVRPDATTLASVLPAAAEVADVTMGRCVHSFAEKCGLAEHEHVL 250
Query: 69 TGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLG 128
TGLI +YSKC D S+R + D M +V++N++IS +S + ++ + E+ LG
Sbjct: 251 TGLISLYSKCGDVESARCLFDMM--EKPDLVAYNALISGYSVNGMVGSSVNLFTELMTLG 308
Query: 129 LELSASTFVSVVSGCS-FRQGISMHCC---VYKLGLLNNEIPLANSVMSMYAKFGKVNEA 184
L ++ST V+++ S F + C V K G N P++ ++ +++ + + A
Sbjct: 309 LWPNSSTLVALIPVHSPFGHDLLAQCLHGFVLKSGFTANS-PVSTAITTLHCRLNDMESA 367
Query: 185 RSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQV 244
R FD + E ++ SW +I GY G A L QM +++V P+ + + + CAQ+
Sbjct: 368 RKAFDTMPEKTMESWNAMISGYAQNGLTEMAVALFEQMVKLNVRPNPITISSTLSACAQL 427
Query: 245 GNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMI 304
G L L +H ++ + + L+ MY KCG + ARR+F+ + K+V W +MI
Sbjct: 428 GALSLGKWLHRIITEEDLEPNVYVMTALIDMYAKCGSISEARRIFNTMDNKNVVSWNAMI 487
Query: 305 GGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEI-----EEYIV 359
GY G +EA+ L+K +L + P AT + L AC+ G + +G ++ ++Y +
Sbjct: 488 AGYGLHGQGAEALKLYKDMLDAHLLPTSATFLSVLYACSHGGLVEEGWKVFRSMTDDYAI 547
Query: 360 LNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDL--AVWSAMINGYAIHGMGDQA 417
G+E T ++ + + G++ +A E+ P + VW A++ +H D A
Sbjct: 548 NPGIEHC----TCMVDLLGRAGQLKEAFELISEFPKSAVGPGVWGALLGACMVHKDSDLA 603
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 103/211 (48%), Gaps = 8/211 (3%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI NG E ++ + M++ V N T L ACA + ++ GK +H + +
Sbjct: 385 MISGYAQNGLTEMAVALFEQMVKLNVRPNPITISSTLSACAQLGALSLGKWLHRIITEED 444
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+ + +V T LIDMY+KC +R++ + M ++VVSWN++I+ + EA+ +
Sbjct: 445 LEPNVYVMTALIDMYAKCGSISEARRIFNTMDN--KNVVSWNAMIAGYGLHGQGAEALKL 502
Query: 121 LKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
K+M L +++TF+SV+ CS +G + + +N I ++ +
Sbjct: 503 YKDMLDAHLLPTSATFLSVLYACSHGGLVEEGWKVFRSMTDDYAINPGIEHCTCMVDLLG 562
Query: 177 KFGKVNEARSIFDEIGETSIVS--WTTIIGG 205
+ G++ EA + E ++++ W ++G
Sbjct: 563 RAGQLKEAFELISEFPKSAVGPGVWGALLGA 593
>gi|6706414|emb|CAB66100.1| putative protein [Arabidopsis thaliana]
Length = 803
Score = 369 bits (947), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 209/634 (32%), Positives = 355/634 (55%), Gaps = 30/634 (4%)
Query: 11 FEETLSTYSSMLQTGVHGNSFTFPLVLKACANI---NSIWDGKRVHSHVLKVGFQQDAFV 67
+E L + ML V +SFT V+ AC+N+ + GK+VH++ L+ G + ++F+
Sbjct: 93 WEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKG-ELNSFI 151
Query: 68 QTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLND---EAILVLKEM 124
L+ MY K SS+ +L R +V+WN+++S+ C N+ EA+ L+EM
Sbjct: 152 INTLVAMYGKLGKLASSKVLLGSFGGR--DLVTWNTVLSS---LCQNEQLLEALEYLREM 206
Query: 125 WVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGK 180
+ G+E T SV+ CS R G +H K G L+ + ++++ MY +
Sbjct: 207 VLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQ 266
Query: 181 VNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMS-VTPDLVVFLNLIL 239
V R +FD + + I W +I GY + EA L M + + + ++
Sbjct: 267 VLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVP 326
Query: 240 GCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFL 299
C + G ++H ++K G + + + N L+ MY++ G +++A R+F + ++ +
Sbjct: 327 ACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVT 386
Query: 300 WTSMIGGYAQLGYPSEAVNLFKRLL-----------KTSVRPNEATLATTLSACAELGSL 348
W +MI GY + +A+ L ++ + S++PN TL T L +CA L +L
Sbjct: 387 WNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSAL 446
Query: 349 SKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGY 408
+KGKEI Y + N L ++ V ++L+ M++KCG + +++VF+++P K++ W+ +I Y
Sbjct: 447 AKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAY 506
Query: 409 AIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEP 468
+HG G +A++L +M V+G+KP+ V + S+ +ACSHSGMVD+GL F M+ ++G+EP
Sbjct: 507 GMHGNGQEAIDLL-RMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEP 565
Query: 469 SIEHYLCLVDLLGRAGRFDLALKTIHEMPVEV-QAQVWAPLLSACMKHHNVELGEYAAKN 527
S +HY C+VDLLGRAGR A + ++ MP + +A W+ LL A H+N+E+GE AA+N
Sbjct: 566 SSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQN 625
Query: 528 LLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVA 587
L+ L P +Y+L+AN+++SAG+W +A R M ++ + KEPG S +E V FVA
Sbjct: 626 LIQLEPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFVA 685
Query: 588 GDRSHHLSVDIRKTLKELHIKLLEAGYIAEADIV 621
GD SH S + L+ L ++ + GY+ + V
Sbjct: 686 GDSSHPQSEKLSGYLETLWERMRKEGYVPDTSCV 719
Score = 233 bits (595), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 149/516 (28%), Positives = 269/516 (52%), Gaps = 24/516 (4%)
Query: 21 MLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAF-VQTGLIDMYSKCS 79
M+ G+ +++ FP +LKA A++ + GK++H+HV K G+ D+ V L+++Y KC
Sbjct: 1 MIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCG 60
Query: 80 DFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSV 139
DF + KV D + R+ VSWNS+IS+ + A+ + M +E S+ T VSV
Sbjct: 61 DFGAVYKVFDR--ISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSV 118
Query: 140 VSGCS---FRQGISMHCCVYKLGLLNNEIP--LANSVMSMYAKFGKVNEARSIFDEIGET 194
V+ CS +G+ M V+ GL E+ + N++++MY K GK+ ++ + G
Sbjct: 119 VTACSNLPMPEGLMMGKQVHAYGLRKGELNSFIINTLVAMYGKLGKLASSKVLLGSFGGR 178
Query: 195 SIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMH 254
+V+W T++ + EA +M V PD +++ C+ + L +H
Sbjct: 179 DLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELH 238
Query: 255 SLLLKSGYNNEDP-LDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYP 313
+ LK+G +E+ + + LV MY C + RRVFD + ++ + LW +MI GY+Q +
Sbjct: 239 AYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHD 298
Query: 314 SEAVNLFKRLLKTS-VRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTS 372
EA+ LF + +++ + N T+A + AC G+ S+ + I ++V GL+ +R VQ +
Sbjct: 299 KEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNT 358
Query: 373 LIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVE---- 428
L+ M+S+ G+I+ A +F ++ D+DL W+ MI GY + AL L +KMQ++E
Sbjct: 359 LMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVS 418
Query: 429 ------GLKPDAVVYTSILSACSHSGMVDDGLSFFK-SMQSNFGIEPSIEHYLCLVDLLG 481
LKP+++ +IL +C+ + G ++++N + ++ LVD+
Sbjct: 419 KGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGS--ALVDMYA 476
Query: 482 RAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHN 517
+ G ++ K ++P + W ++ A H N
Sbjct: 477 KCGCLQMSRKVFDQIP-QKNVITWNVIIMAYGMHGN 511
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 139/498 (27%), Positives = 254/498 (51%), Gaps = 45/498 (9%)
Query: 7 NNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG-FQQDA 65
N E L M+ GV + FT VL AC+++ + GK +H++ LK G +++
Sbjct: 192 QNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENS 251
Query: 66 FVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEM- 124
FV + L+DMY C +S R+V D M R + WN++I+ +S+ + EA+L+ M
Sbjct: 252 FVGSALVDMYCNCKQVLSGRRVFDGMFD--RKIGLWNAMIAGYSQNEHDKEALLLFIGME 309
Query: 125 WVLGLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGK 180
GL +++T VV C +F + ++H V K GL + + N++M MY++ GK
Sbjct: 310 ESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRF-VQNTLMDMYSRLGK 368
Query: 181 VNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMR-----------RMSVTP 229
++ A IF ++ + +V+W T+I GYV + +A L ++M+ R+S+ P
Sbjct: 369 IDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKP 428
Query: 230 DLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVF 289
+ + + ++ CA + L +H+ +K+ + + + LV MY KCG L+++R+VF
Sbjct: 429 NSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVF 488
Query: 290 DAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLS 349
D + +K+V W +I Y G EA++L + ++ V+PNE T + +AC+ G +
Sbjct: 489 DQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVD 548
Query: 350 KGKEIEEYIVLN---GLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDL---AVWSA 403
+G I + V+ G+E + ++ + + GRI +A ++ +P +D WS+
Sbjct: 549 EGLRI--FYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMP-RDFNKAGAWSS 605
Query: 404 MINGYAIHG---MGDQALNLFYKMQHVEGLKPD-AVVYTSILSACSHSGMVDDGLSFFKS 459
++ IH +G+ A Q++ L+P+ A Y + + S +G+ D ++
Sbjct: 606 LLGASRIHNNLEIGEIA------AQNLIQLEPNVASHYVLLANIYSSAGLWDKATEVRRN 659
Query: 460 MQSNFGI--EPS---IEH 472
M+ G+ EP IEH
Sbjct: 660 MKEQ-GVRKEPGCSWIEH 676
>gi|32487551|emb|CAE03754.1| OSJNBa0013K16.3 [Oryza sativa Japonica Group]
Length = 865
Score = 369 bits (947), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 230/671 (34%), Positives = 347/671 (51%), Gaps = 68/671 (10%)
Query: 11 FEETLSTYSSMLQTGVH-GNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQT 69
F + L T+ SM ++G N+FTF V+K+C + ++ K F D V+T
Sbjct: 118 FLDGLETFVSMHRSGDSLPNAFTFCCVMKSCGALGCRELAPQLLGLFWKFDFWGDPDVET 177
Query: 70 GLIDMYSKCS--DFVSSRKVLDEMPVRL---------------------------RSVVS 100
L+DM+ +C DF S E P R VVS
Sbjct: 178 ALVDMFVRCGYVDFASRLFSQIERPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVS 237
Query: 101 WNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGC----SFRQGISMHCCVY 156
WN +I+A S++ EA+ ++ EM G+ L ++T+ S ++ C S G +H V
Sbjct: 238 WNMMIAALSQSGRVREALGLVVEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVI 297
Query: 157 KLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAF 216
+ L + +A++++ +YAK G EA+ +F+ + + + VSWT +IGG + +++
Sbjct: 298 R-SLPQIDPYVASALIELYAKCGSFKEAKRVFNSLQDRNSVSWTVLIGGSLQYECFSKSV 356
Query: 217 GLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMY 276
L NQMR + D LI GC +L L +HSL LKSG+N + N L+S+Y
Sbjct: 357 ELFNQMRAELMAIDQFALATLISGCFNRMDLCLGRQLHSLCLKSGHNRAIVVSNSLISLY 416
Query: 277 TKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFK--------------- 321
KCGDL+ A VF ++ E+ + WTSMI Y+Q+G +A F
Sbjct: 417 AKCGDLQNAEFVFSSMSERDIVSWTSMITAYSQIGNIIKAREFFDGMATRNAITWNAMLG 476
Query: 322 -----------------RLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLE 364
L + V P+ T T CA++G+ G +I + V GL
Sbjct: 477 AYIQHGAEEDGLKMYSAMLSQKDVTPDWVTYVTLFRGCADIGANKLGDQIIGHTVKAGLI 536
Query: 365 SNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKM 424
N V + I M+SKCGRI++A+++F+ + KD+ W+AMI GY+ HGMG QA F M
Sbjct: 537 LNVSVANAAITMYSKCGRISEAQKLFDLLNGKDVVSWNAMITGYSQHGMGKQAAKTFDDM 596
Query: 425 QHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAG 484
+G KPD + Y ++LS CSHSG+V +G +F M GI P +EH+ C+VDLLGRAG
Sbjct: 597 LS-KGAKPDYISYVAVLSGCSHSGLVQEGKLYFDMMTRVHGISPGLEHFSCMVDLLGRAG 655
Query: 485 RFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMAN 544
A I +MP++ A+VW LLSAC H N EL E AAK++ L+ +G+Y+L+A
Sbjct: 656 HLTEAKDLIDKMPMKPTAEVWGALLSACKIHGNDELAELAAKHVFELDSPDSGSYMLLAK 715
Query: 545 LFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKE 604
+++ AG ++A R LM D+ + K PG+S +E++ V VF A D SH + IR + E
Sbjct: 716 IYSDAGKSDDSAQVRKLMRDKGIKKNPGYSWMEVENKVHVFKADDVSHPQVIAIRNKMDE 775
Query: 605 LHIKLLEAGYI 615
L K+ GY+
Sbjct: 776 LMEKIAHLGYV 786
Score = 188 bits (478), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 135/500 (27%), Positives = 238/500 (47%), Gaps = 45/500 (9%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI + +G E L M + GV +S T+ L ACA + S+ GK++H+ V++
Sbjct: 241 MIAALSQSGRVREALGLVVEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSL 300
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
Q D +V + LI++Y+KC F +++V + + + R+ VSW +I + +++ +
Sbjct: 301 PQIDPYVASALIELYAKCGSFKEAKRVFNSL--QDRNSVSWTVLIGGSLQYECFSKSVEL 358
Query: 121 LKEMWVLGLELSASTFVSVVSGCSFRQ----GISMHCCVYKLGLLNNEIPLANSVMSMYA 176
+M + + +++SGC R G +H K G N I ++NS++S+YA
Sbjct: 359 FNQMRAELMAIDQFALATLISGCFNRMDLCLGRQLHSLCLKSG-HNRAIVVSNSLISLYA 417
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQM-------------- 222
K G + A +F + E IVSWT++I Y +GN+ +A + M
Sbjct: 418 KCGDLQNAEFVFSSMSERDIVSWTSMITAYSQIGNIIKAREFFDGMATRNAITWNAMLGA 477
Query: 223 ------------------RRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNN 264
+ VTPD V ++ L GCA +G L + +K+G
Sbjct: 478 YIQHGAEEDGLKMYSAMLSQKDVTPDWVTYVTLFRGCADIGANKLGDQIIGHTVKAGLIL 537
Query: 265 EDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLL 324
+ N ++MY+KCG + A+++FD + K V W +MI GY+Q G +A F +L
Sbjct: 538 NVSVANAAITMYSKCGRISEAQKLFDLLNGKDVVSWNAMITGYSQHGMGKQAAKTFDDML 597
Query: 325 KTSVRPNEATLATTLSACAELGSLSKGKEIEEYIV-LNGLESNRQVQTSLIHMFSKCGRI 383
+P+ + LS C+ G + +GK + + ++G+ + + ++ + + G +
Sbjct: 598 SKGAKPDYISYVAVLSGCSHSGLVQEGKLYFDMMTRVHGISPGLEHFSCMVDLLGRAGHL 657
Query: 384 NKAKEVFERVPDKDLA-VWSAMINGYAIHGMGDQALNLFYKMQHVEGL-KPDAVVYTSIL 441
+AK++ +++P K A VW A+++ IHG D+ L K HV L PD+ Y +
Sbjct: 658 TEAKDLIDKMPMKPTAEVWGALLSACKIHG-NDELAELAAK--HVFELDSPDSGSYMLLA 714
Query: 442 SACSHSGMVDDGLSFFKSMQ 461
S +G DD K M+
Sbjct: 715 KIYSDAGKSDDSAQVRKLMR 734
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 124/524 (23%), Positives = 222/524 (42%), Gaps = 108/524 (20%)
Query: 37 LKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVL-------- 88
L++C + ++ + +H ++ VG F+Q L+ Y C +R++L
Sbjct: 11 LRSCGSRGALAGARALHGRLVTVGLASAVFLQNTLLHAYLSCGALSDARRLLRADIKEPN 70
Query: 89 ------------------------DEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEM 124
D MP R V SWN+++S + +A
Sbjct: 71 VITHNIMMNGYAKQGSLSDAEELFDRMP--RRDVASWNTLMSGYFQA-----------RR 117
Query: 125 WVLGLELSASTFVSV-VSGCSFRQGISMHCCVYK--------------LGLL-------- 161
++ GLE TFVS+ SG S + CCV K LGL
Sbjct: 118 FLDGLE----TFVSMHRSGDSLPNAFTF-CCVMKSCGALGCRELAPQLLGLFWKFDFWGD 172
Query: 162 ----------------------------NNEIPLANSVMSMYAKFGKVNEARSIFDEIGE 193
I NS+++ YAK ++ A F+++ E
Sbjct: 173 PDVETALVDMFVRCGYVDFASRLFSQIERPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAE 232
Query: 194 TSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSM 253
+VSW +I G V EA GL +M R V D + + + CA++ +L +
Sbjct: 233 RDVVSWNMMIAALSQSGRVREALGLVVEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQL 292
Query: 254 HSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYP 313
H+ +++S + + + L+ +Y KCG + A+RVF+++ +++ WT +IGG Q
Sbjct: 293 HAKVIRSLPQIDPYVASALIELYAKCGSFKEAKRVFNSLQDRNSVSWTVLIGGSLQYECF 352
Query: 314 SEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSL 373
S++V LF ++ + ++ LAT +S C L G+++ + +G V SL
Sbjct: 353 SKSVELFNQMRAELMAIDQFALATLISGCFNRMDLCLGRQLHSLCLKSGHNRAIVVSNSL 412
Query: 374 IHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKP- 432
I +++KCG + A+ VF + ++D+ W++MI Y+ Q N+ + +G+
Sbjct: 413 ISLYAKCGDLQNAEFVFSSMSERDIVSWTSMITAYS------QIGNIIKAREFFDGMATR 466
Query: 433 DAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCL 476
+A+ + ++L A G +DGL + +M S + P Y+ L
Sbjct: 467 NAITWNAMLGAYIQHGAEEDGLKMYSAMLSQKDVTPDWVTYVTL 510
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 73/157 (46%), Gaps = 6/157 (3%)
Query: 334 TLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFE-R 392
LA L +C G+L+ + + +V GL S +Q +L+H + CG ++ A+ +
Sbjct: 6 ALADALRSCGSRGALAGARALHGRLVTVGLASAVFLQNTLLHAYLSCGALSDARRLLRAD 65
Query: 393 VPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDD 452
+ + ++ + M+NGYA G A LF +M + D + +++S + D
Sbjct: 66 IKEPNVITHNIMMNGYAKQGSLSDAEELFDRMP-----RRDVASWNTLMSGYFQARRFLD 120
Query: 453 GLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLA 489
GL F SM + P+ + C++ G G +LA
Sbjct: 121 GLETFVSMHRSGDSLPNAFTFCCVMKSCGALGCRELA 157
>gi|115466810|ref|NP_001057004.1| Os06g0185700 [Oryza sativa Japonica Group]
gi|55773755|dbj|BAD72438.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113595044|dbj|BAF18918.1| Os06g0185700 [Oryza sativa Japonica Group]
gi|125596287|gb|EAZ36067.1| hypothetical protein OsJ_20377 [Oryza sativa Japonica Group]
Length = 673
Score = 369 bits (946), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 206/546 (37%), Positives = 304/546 (55%), Gaps = 9/546 (1%)
Query: 35 LVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVR 94
L LKAC G+R+H V+K G D FV L+DMY+K D ++RKV D +P R
Sbjct: 128 LALKACVRSADFRYGRRLHCDVVKAG-GADGFVMNSLVDMYAKAGDLENARKVFDRVPER 186
Query: 95 LRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCS----FRQGIS 150
+VVSW S++S + + +E +++ EM + S T VSV++ C+ QG
Sbjct: 187 --NVVSWTSMLSGSIQNGIAEEGLVLFNEMRQDNVHPSEYTMVSVLAACAMLGGLHQGRW 244
Query: 151 MHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVG 210
+H V K GL N ++ S++ MYAK KV +AR +FDE+ IV WT +I GY
Sbjct: 245 IHGSVIKYGLSTNSF-ISASLLDMYAKCEKVEDARRVFDELEFVDIVLWTAMIVGYTQNK 303
Query: 211 NVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDN 270
+A L + +S+ P+ V +I AQ+ +L L S+H++ +K G D + N
Sbjct: 304 RPLDALQLFLHKKFVSIVPNSVTIATVISASAQLRHLPLGRSVHAIGVKLGTMESDVVRN 363
Query: 271 LLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRP 330
LV MY KC L A +F +L K V W SM+ GY++ G +E++ LF R+ + P
Sbjct: 364 ALVDMYAKCQALPEANSIFGRILIKDVVAWNSMMAGYSENGMANESLVLFNRMRMQGISP 423
Query: 331 NEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVF 390
+ ++ LSAC L L GK Y + SN V T+L++++SKC + A+ VF
Sbjct: 424 DAISVVNALSACVCLADLHIGKGFHTYAIKYAFMSNIYVNTALLNLYSKCADLPSAQRVF 483
Query: 391 ERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMV 450
+ D++ WSAMI GY + G +++LF +M E + P+ VV+TSILSACSH+GMV
Sbjct: 484 NDMTDRNSVTWSAMIGGYGMQGDSAGSIDLFNEMLK-ENIHPNEVVFTSILSACSHTGMV 542
Query: 451 DDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLS 510
G +F SM +F I PS++HY C+VD++ RAG + AL+ I MP++ VW L
Sbjct: 543 TAGKEYFDSMARHFNITPSMKHYACMVDVMARAGNLEEALEFIQNMPIKAGISVWGSFLH 602
Query: 511 ACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKE 570
C H +E GE A K + L+P + Y+LM+NL+TS G W ++ T R M ++ L K
Sbjct: 603 GCKLHSRLEFGEEAIKKMAALHPETPDFYVLMSNLYTSYGRWDKSQTIRRWMQEQGLVKL 662
Query: 571 PGWSQV 576
PG S V
Sbjct: 663 PGCSSV 668
Score = 217 bits (553), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 125/450 (27%), Positives = 238/450 (52%), Gaps = 15/450 (3%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
M+ S NG EE L ++ M Q VH + +T VL ACA + + G+ +H V+K G
Sbjct: 194 MLSGSIQNGIAEEGLVLFNEMRQDNVHPSEYTMVSVLAACAMLGGLHQGRWIHGSVIKYG 253
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
++F+ L+DMY+KC +R+V DE+ +V W ++I +++ +A+ +
Sbjct: 254 LSTNSFISASLLDMYAKCEKVEDARRVFDEL--EFVDIVLWTAMIVGYTQNKRPLDALQL 311
Query: 121 LKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
+ + ++ T +V+S + G S+H KLG + +++ + N+++ MYA
Sbjct: 312 FLHKKFVSIVPNSVTIATVISASAQLRHLPLGRSVHAIGVKLGTMESDV-VRNALVDMYA 370
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K + EA SIF I +V+W +++ GY G NE+ L N+MR ++PD + +N
Sbjct: 371 KCQALPEANSIFGRILIKDVVAWNSMMAGYSENGMANESLVLFNRMRMQGISPDAISVVN 430
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
+ C + +L + H+ +K + + ++ L+++Y+KC DL A+RVF+ + +++
Sbjct: 431 ALSACVCLADLHIGKGFHTYAIKYAFMSNIYVNTALLNLYSKCADLPSAQRVFNDMTDRN 490
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEE 356
W++MIGGY G + +++LF +LK ++ PNE + LSAC+ G ++ GKE +
Sbjct: 491 SVTWSAMIGGYGMQGDSAGSIDLFNEMLKENIHPNEVVFTSILSACSHTGMVTAGKEYFD 550
Query: 357 YIVLN-GLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDK-DLAVWSAMINGYAIHG-- 412
+ + + + + ++ + ++ G + +A E + +P K ++VW + ++G +H
Sbjct: 551 SMARHFNITPSMKHYACMVDVMARAGNLEEALEFIQNMPIKAGISVWGSFLHGCKLHSRL 610
Query: 413 -MGDQALNLFYKMQHVEGLKPDAVVYTSIL 441
G++A+ KM + PD V S L
Sbjct: 611 EFGEEAIK---KMAALHPETPDFYVLMSNL 637
Score = 207 bits (527), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 136/427 (31%), Positives = 223/427 (52%), Gaps = 34/427 (7%)
Query: 35 LVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQ--TGLIDMYSKCSDFVSSRKVLDEMP 92
L+L AC + S+ + +H +L + ++ T L+ Y+ D S+R VLD P
Sbjct: 26 LLLPACGTLRSL---RALHGRLLLLTSGLLRGIRARTKLLSCYAALGDLASARGVLDGTP 82
Query: 93 ----VRLRSVVSWNSIISAHSRACLNDEAILVLKEMW-----------VLGLELSASTFV 137
R ++ W ++ A S A +A+ + ++M VL L L A
Sbjct: 83 RPDAYAYRVMLGW--LVDAGSHA----DAVALHRDMRRRCPAAAQADVVLSLALKA---- 132
Query: 138 SVVSGCSFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIV 197
V FR G +HC V K G + + NS++ MYAK G + AR +FD + E ++V
Sbjct: 133 -CVRSADFRYGRRLHCDVVKAGGADGFV--MNSLVDMYAKAGDLENARKVFDRVPERNVV 189
Query: 198 SWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLL 257
SWT+++ G + G E L N+MR+ +V P ++++ CA +G L +H +
Sbjct: 190 SWTSMLSGSIQNGIAEEGLVLFNEMRQDNVHPSEYTMVSVLAACAMLGGLHQGRWIHGSV 249
Query: 258 LKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAV 317
+K G + + L+ MY KC +E ARRVFD + + LWT+MI GY Q P +A+
Sbjct: 250 IKYGLSTNSFISASLLDMYAKCEKVEDARRVFDELEFVDIVLWTAMIVGYTQNKRPLDAL 309
Query: 318 NLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMF 377
LF S+ PN T+AT +SA A+L L G+ + V G + V+ +L+ M+
Sbjct: 310 QLFLHKKFVSIVPNSVTIATVISASAQLRHLPLGRSVHAIGVKLGTMESDVVRNALVDMY 369
Query: 378 SKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVY 437
+KC + +A +F R+ KD+ W++M+ GY+ +GM +++L LF +M+ ++G+ PDA+
Sbjct: 370 AKCQALPEANSIFGRILIKDVVAWNSMMAGYSENGMANESLVLFNRMR-MQGISPDAISV 428
Query: 438 TSILSAC 444
+ LSAC
Sbjct: 429 VNALSAC 435
>gi|413942600|gb|AFW75249.1| hypothetical protein ZEAMMB73_388642 [Zea mays]
Length = 693
Score = 369 bits (946), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 202/598 (33%), Positives = 330/598 (55%), Gaps = 13/598 (2%)
Query: 32 TFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEM 91
TF +LK CA + G+ VH+ + G ++ T L +MY KC +R+V D M
Sbjct: 18 TFTALLKLCAARADLATGRAVHAQLEARGLASESIASTALANMYFKCRRPADARRVFDRM 77
Query: 92 PVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVL--GLELSASTFVSVVSGCSFRQGI 149
P R R V+WN++++ ++R L A+ + M G + T VSV+ C+
Sbjct: 78 PSRDR--VAWNAVVAGYARNGLPSSAMEAVVRMQGEEGGERPDSVTLVSVLPACA--DAR 133
Query: 150 SMHCC--VYKLGL---LNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIG 204
++H C V+ L L+ + ++ +V+ Y K G V AR++FD + + VSW +I
Sbjct: 134 ALHACREVHAFALRAGLDELVNVSTAVLDAYCKCGAVEAARAVFDCMPVRNSVSWNAMID 193
Query: 205 GYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNN 264
GY + GN EA L +M + V L + C ++G L +H LL++ G ++
Sbjct: 194 GYADNGNATEAMALFWRMVQEGVDVTDASVLAALQACGELGYLDEVRRVHELLVRVGLSS 253
Query: 265 EDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFL-WTSMIGGYAQLGYPSEAVNLFKRL 323
+ N L++ Y KC +LA +VF+ + K + W +MI G+ Q P +A LF R+
Sbjct: 254 NVSVTNALITTYAKCKRADLAAQVFNELGNKKTRISWNAMILGFTQNECPEDAERLFARM 313
Query: 324 LKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRI 383
+VRP+ TL + + A A++ + + I Y + + L+ + V T+LI M+SKCGR+
Sbjct: 314 QLENVRPDSFTLVSVIPAVADISDPLQARWIHGYSIRHQLDQDVYVLTALIDMYSKCGRV 373
Query: 384 NKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSA 443
+ A+ +F+ D+ + W+AMI+GY HG G A+ LF +M+ L P+ + S+L+A
Sbjct: 374 SIARRLFDSARDRHVITWNAMIHGYGSHGFGQAAVELFEEMKGTGSL-PNETTFLSVLAA 432
Query: 444 CSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQ 503
CSH+G+VD+G +F SM+ ++G+EP +EHY +VDLLGRAG+ D A I MP+E
Sbjct: 433 CSHAGLVDEGQKYFASMKKDYGLEPGMEHYGTMVDLLGRAGKLDEAWSFIKNMPIEPGIS 492
Query: 504 VWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMD 563
V+ +L AC H NVEL E +A+ + L P ++L+AN++ +A MWK+ A R M+
Sbjct: 493 VYGAMLGACKLHKNVELAEESAQIIFELGPEEGVYHVLLANIYANASMWKDVARVRTAME 552
Query: 564 DRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKELHIKLLEAGYIAEADIV 621
+ L K PGWS +++ V F +G +H + DI L +L ++ + GY+ + D +
Sbjct: 553 KKGLQKTPGWSIIQLKNEVHTFYSGSTNHQHAKDIYARLAKLIEEIKDMGYVPDTDSI 610
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 105/418 (25%), Positives = 219/418 (52%), Gaps = 13/418 (3%)
Query: 23 QTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFV 82
+ G +S T VL ACA+ ++ + VH+ L+ G + V T ++D Y KC
Sbjct: 112 EGGERPDSVTLVSVLPACADARALHACREVHAFALRAGLDELVNVSTAVLDAYCKCGAVE 171
Query: 83 SSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSG 142
++R V D MPV R+ VSWN++I ++ EA+ + M G++++ ++ ++ +
Sbjct: 172 AARAVFDCMPV--RNSVSWNAMIDGYADNGNATEAMALFWRMVQEGVDVTDASVLAALQA 229
Query: 143 CS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIG-ETSIV 197
C + +H + ++GL +N + + N++++ YAK + + A +F+E+G + + +
Sbjct: 230 CGELGYLDEVRRVHELLVRVGLSSN-VSVTNALITTYAKCKRADLAAQVFNELGNKKTRI 288
Query: 198 SWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLL 257
SW +I G+ +A L +M+ +V PD +++I A + + A +H
Sbjct: 289 SWNAMILGFTQNECPEDAERLFARMQLENVRPDSFTLVSVIPAVADISDPLQARWIHGYS 348
Query: 258 LKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAV 317
++ + + + L+ MY+KCG + +ARR+FD+ ++ V W +MI GY G+ AV
Sbjct: 349 IRHQLDQDVYVLTALIDMYSKCGRVSIARRLFDSARDRHVITWNAMIHGYGSHGFGQAAV 408
Query: 318 NLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLN-GLESNRQVQTSLIHM 376
LF+ + T PNE T + L+AC+ G + +G++ + + GLE + +++ +
Sbjct: 409 ELFEEMKGTGSLPNETTFLSVLAACSHAGLVDEGQKYFASMKKDYGLEPGMEHYGTMVDL 468
Query: 377 FSKCGRINKAKEVFERVP-DKDLAVWSAMINGYAIHG---MGDQALNLFYKMQHVEGL 430
+ G++++A + +P + ++V+ AM+ +H + +++ + +++ EG+
Sbjct: 469 LGRAGKLDEAWSFIKNMPIEPGISVYGAMLGACKLHKNVELAEESAQIIFELGPEEGV 526
Score = 129 bits (323), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 85/311 (27%), Positives = 148/311 (47%), Gaps = 6/311 (1%)
Query: 229 PDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRV 288
P L F L+ CA +L ++H+ L G +E L +MY KC ARRV
Sbjct: 14 PVLRTFTALLKLCAARADLATGRAVHAQLEARGLASESIASTALANMYFKCRRPADARRV 73
Query: 289 FDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLL--KTSVRPNEATLATTLSACAELG 346
FD + + W +++ GYA+ G PS A+ R+ + RP+ TL + L ACA+
Sbjct: 74 FDRMPSRDRVAWNAVVAGYARNGLPSSAMEAVVRMQGEEGGERPDSVTLVSVLPACADAR 133
Query: 347 SLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMIN 406
+L +E+ + + GL+ V T+++ + KCG + A+ VF+ +P ++ W+AMI+
Sbjct: 134 ALHACREVHAFALRAGLDELVNVSTAVLDAYCKCGAVEAARAVFDCMPVRNSVSWNAMID 193
Query: 407 GYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGI 466
GYA +G +A+ LF++M EG+ + L AC G +D+ + + G+
Sbjct: 194 GYADNGNATEAMALFWRMVQ-EGVDVTDASVLAALQACGELGYLDE-VRRVHELLVRVGL 251
Query: 467 EPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGE--YA 524
++ L+ + R DLA + +E+ + W ++ ++ E E +A
Sbjct: 252 SSNVSVTNALITTYAKCKRADLAAQVFNELGNKKTRISWNAMILGFTQNECPEDAERLFA 311
Query: 525 AKNLLTLNPGS 535
L + P S
Sbjct: 312 RMQLENVRPDS 322
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/312 (22%), Positives = 150/312 (48%), Gaps = 8/312 (2%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI +NG+ E ++ + M+Q GV + L+AC + + + +RVH +++VG
Sbjct: 191 MIDGYADNGNATEAMALFWRMVQEGVDVTDASVLAALQACGELGYLDEVRRVHELLVRVG 250
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+ V LI Y+KC + +V +E+ + ++ +SWN++I ++ ++A +
Sbjct: 251 LSSNVSVTNALITTYAKCKRADLAAQVFNELGNK-KTRISWNAMILGFTQNECPEDAERL 309
Query: 121 LKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGL---LNNEIPLANSVMSMYAK 177
M + + + T VSV+ + ++ + L+ ++ + +++ MY+K
Sbjct: 310 FARMQLENVRPDSFTLVSVIPAVADISDPLQARWIHGYSIRHQLDQDVYVLTALIDMYSK 369
Query: 178 FGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNL 237
G+V+ AR +FD + +++W +I GY + G A L +M+ P+ FL++
Sbjct: 370 CGRVSIARRLFDSARDRHVITWNAMIHGYGSHGFGQAAVELFEEMKGTGSLPNETTFLSV 429
Query: 238 ILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNL--LVSMYTKCGDLELARR-VFDAVLE 294
+ C+ G L + +K Y E +++ +V + + G L+ A + + +E
Sbjct: 430 LAACSHAG-LVDEGQKYFASMKKDYGLEPGMEHYGTMVDLLGRAGKLDEAWSFIKNMPIE 488
Query: 295 KSVFLWTSMIGG 306
+ ++ +M+G
Sbjct: 489 PGISVYGAMLGA 500
>gi|302790389|ref|XP_002976962.1| hypothetical protein SELMODRAFT_106096 [Selaginella moellendorffii]
gi|300155440|gb|EFJ22072.1| hypothetical protein SELMODRAFT_106096 [Selaginella moellendorffii]
Length = 1108
Score = 369 bits (946), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 206/621 (33%), Positives = 339/621 (54%), Gaps = 7/621 (1%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVL-KV 59
M+ S + SF + ++T+ ML G+ N +F +L AC+N ++ G+++HS +L +
Sbjct: 408 MLGASEDRKSFGKVVNTFHHMLLAGIDPNKVSFIAILNACSNSEALDFGRKIHSLILTRR 467
Query: 60 GFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAIL 119
++ V T L+ MY KC + V EMP+ RS+V+WN ++ A+++ + EA
Sbjct: 468 RDYVESSVATMLVSMYGKCGSISEAELVFKEMPLPSRSLVTWNVMLGAYAQNDRSKEAFG 527
Query: 120 VLKEMWVLGLELSASTFVSVVSGCSFRQGIS-MHCCVYKLGLLNNEIPLANSVMSMYAKF 178
L EM G+ A +F SV+S C Q + C+ + G L +++SM+ +
Sbjct: 528 ALMEMLQGGVLPDALSFTSVLSSCYCSQEAQVLRMCILESGY--RSACLETALISMHGRC 585
Query: 179 GKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLI 238
++ +ARS+F+E+ +VSWT ++ + E L +M+ V PD +
Sbjct: 586 RELEQARSVFNEMDHGDVVSWTAMVSATAENRDFKEVHNLFRRMQLEGVIPDKFTLATTL 645
Query: 239 LGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVF 298
C L L +H+ + + G + ++N L++MY+ CGD A F+ + + +
Sbjct: 646 DTCLASTTLGLGKVIHACVTEIGLEADIAVENALLNMYSNCGDWREALSFFETMKARDLV 705
Query: 299 LWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYI 358
W M YAQ G EAV LF+++ V+P++ T +TTL+ +S GK
Sbjct: 706 SWNIMSAAYAQAGLAKEAVLLFRQMQLEGVKPDKLTFSTTLNVSGGSALVSDGKLFHALA 765
Query: 359 VLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQAL 418
+GL+S+ V T L+ +++KCG++++A +F D + + +A+I A HG ++A+
Sbjct: 766 AESGLDSDVSVATGLVKLYAKCGKLDEAMSLFRGACDWTVVLLNAIIGALAQHGFSEEAV 825
Query: 419 NLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVD 478
+F+KMQ EG++PD SI+SAC H+GMV++G S F +M+ FGI P++EHY C VD
Sbjct: 826 KMFWKMQQ-EGVRPDVATLVSIISACGHAGMVEEGCSSFLTMKEYFGISPTLEHYACFVD 884
Query: 479 LLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGN 538
LLGRAG+ + A + I +MP E VW LL C + ELGE A+ +L L+P ++
Sbjct: 885 LLGRAGQLEHAEQIIRKMPFEDNTLVWTSLLGTCKLQGDAELGERCAQRILELDPHNSAA 944
Query: 539 YILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDI 598
+++++N++ + G WK+A R M D + PG S EI V FVAGDRSH + +I
Sbjct: 945 HVVLSNIYCATGKWKDADVDRKKMLDENVKNAPGMSWFEIGKQVHEFVAGDRSHPKTDEI 1004
Query: 599 RKTLKELHIKLLEAGYIAEAD 619
L +L + + AGY EAD
Sbjct: 1005 YVVLDKLELLMRRAGY--EAD 1023
Score = 185 bits (469), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 147/542 (27%), Positives = 258/542 (47%), Gaps = 44/542 (8%)
Query: 7 NNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAF 66
GS L + S ++ + + +L++C + N + GK H + G +Q F
Sbjct: 2 KRGSIIRQLCSLSGAVRVDRAADLQEYTALLQSCVDSNDLAKGKHAHELIANAGLEQHLF 61
Query: 67 VQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWV 126
+ LI+MY +C + + +M R+VVSW ++ISA+++ A + + M
Sbjct: 62 LGNCLINMYVRCGSLEEAHAIFSKMEE--RNVVSWTALISANAQCGAFARAFALFRTML- 118
Query: 127 LGLELSAS----TFVSVVSGCSFRQ----GISMHCCVYKLGLLNNEIP---LANSVMSMY 175
LE SA+ T V++++ C+ + G S+H +++LGL + N++++MY
Sbjct: 119 --LESSAAPNSYTLVAMLNACANSRDLAIGRSIHAMIWELGLERASTTATLVGNAMINMY 176
Query: 176 AKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNV-NEAFGLCNQMRRMSVTPDLVVF 234
AK G + +A ++F I E +VSWT + G Y +A + +M + P+++ F
Sbjct: 177 AKCGSLEDAIAVFLAIPEKDVVSWTAMAGAYAQERRFYPDALRIFREMLLQPLAPNVITF 236
Query: 235 LNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVL- 293
+ + C + + +HSLL ++ + N L++MY KCGD E A VF A+
Sbjct: 237 ITALGACTSLRD---GTWLHSLLHEASLGFDPLASNALINMYGKCGDWEGAYSVFKAMAS 293
Query: 294 --EKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELG-SLSK 350
E + W +MI + G +A+ +F+RL +RPN TL T L+A A G
Sbjct: 294 RQELDLVSWNAMISASVEAGRHGDAMAIFRRLRLEGMRPNSVTLITILNALAASGVDFGA 353
Query: 351 GKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDK-DLAVWSAMINGYA 409
+ I +G + + ++I M++KCG + A VF R+ K D+ W+ M+
Sbjct: 354 ARGFHGRIWESGYLRDVVIGNAIISMYAKCGFFSAAWAVFRRIRWKCDVISWNTMLGASE 413
Query: 410 IHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGL---SFFKSMQSNFGI 466
+ +N F+ M + G+ P+ V + +IL+ACS+S +D G S + + ++ +
Sbjct: 414 DRKSFGKVVNTFHHML-LAGIDPNKVSFIAILNACSNSEALDFGRKIHSLILTRRRDY-V 471
Query: 467 EPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQV-WAPLLSACMKHHNVELGEYAA 525
E S+ LV + G+ G A EMP+ ++ V W NV LG YA
Sbjct: 472 ESSVATM--LVSMYGKCGSISEAELVFKEMPLPSRSLVTW-----------NVMLGAYAQ 518
Query: 526 KN 527
+
Sbjct: 519 ND 520
Score = 128 bits (322), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 99/350 (28%), Positives = 168/350 (48%), Gaps = 22/350 (6%)
Query: 224 RMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLE 283
R+ DL + L+ C +L H L+ +G L N L++MY +CG LE
Sbjct: 18 RVDRAADLQEYTALLQSCVDSNDLAKGKHAHELIANAGLEQHLFLGNCLINMYVRCGSLE 77
Query: 284 LARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKR-LLKTSVRPNEATLATTLSAC 342
A +F + E++V WT++I AQ G + A LF+ LL++S PN TL L+AC
Sbjct: 78 EAHAIFSKMEERNVVSWTALISANAQCGAFARAFALFRTMLLESSAAPNSYTLVAMLNAC 137
Query: 343 AELGSLSKGKEIEEYIVLNGLESNRQVQT----SLIHMFSKCGRINKAKEVFERVPDKDL 398
A L+ G+ I I GLE T ++I+M++KCG + A VF +P+KD+
Sbjct: 138 ANSRDLAIGRSIHAMIWELGLERASTTATLVGNAMINMYAKCGSLEDAIAVFLAIPEKDV 197
Query: 399 AVWSAMINGYAI-HGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFF 457
W+AM YA AL +F +M ++ L P+ + + + L AC+ + DG ++
Sbjct: 198 VSWTAMAGAYAQERRFYPDALRIFREML-LQPLAPNVITFITALGACTS---LRDG-TWL 252
Query: 458 KSM--QSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPV--EVQAQVWAPLLSACM 513
S+ +++ G +P + L+++ G+ G ++ A M E+ W ++SA +
Sbjct: 253 HSLLHEASLGFDPLASN--ALINMYGKCGDWEGAYSVFKAMASRQELDLVSWNAMISASV 310
Query: 514 K--HHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGL 561
+ H + + L + P S I + N ++G+ + ARG
Sbjct: 311 EAGRHGDAMAIFRRLRLEGMRPNSV-TLITILNALAASGV--DFGAARGF 357
>gi|356503704|ref|XP_003520645.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
mitochondrial-like [Glycine max]
Length = 855
Score = 368 bits (945), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 211/620 (34%), Positives = 330/620 (53%), Gaps = 10/620 (1%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI + NG + + Y MLQ+G + TF ++KAC I G+++H HV+K G
Sbjct: 229 MISGYSQNGQENDAIIMYIQMLQSGYFPDPLTFGSIIKACCIAGDIDLGRQLHGHVIKSG 288
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+ Q LI MY++ V + V + + ++SW S+I+ ++ EA+ +
Sbjct: 289 YDHHLIAQNALISMYTRFGQIVHASDVFTM--ISTKDLISWASMITGFTQLGYEIEALYL 346
Query: 121 LKEMWVLGL-ELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMY 175
++M+ G + + F SV S C G +H K GL N + S+ MY
Sbjct: 347 FRDMFRQGFYQPNEFIFGSVFSACRSLLEPEFGRQIHGMCAKFGLGRN-VFAGCSLCDMY 405
Query: 176 AKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFL 235
AKFG + A F +I +VSW II + + G+VNEA QM + PD + FL
Sbjct: 406 AKFGFLPSAIRAFYQIESPDLVSWNAIIAAFSDSGDVNEAIYFFCQMMHTGLMPDGITFL 465
Query: 236 NLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEK 295
+L+ C + +HS ++K G + E + N L++MYTKC +L A VF V E
Sbjct: 466 SLLCACGSPVTINQGTQIHSYIIKIGLDKEAAVCNSLLTMYTKCSNLHDAFNVFKDVSEN 525
Query: 296 SVFL-WTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEI 354
+ + W +++ Q E LFK +L + +P+ T+ T L CAEL SL G ++
Sbjct: 526 ANLVSWNAILSACLQHKQAGEVFRLFKLMLFSENKPDNITITTILGTCAELASLEVGNQV 585
Query: 355 EEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMG 414
+ V +GL + V LI M++KCG + A++VF + D+ WS++I GYA G+G
Sbjct: 586 HCFSVKSGLVVDVSVSNRLIDMYAKCGSLKHARDVFGSTQNPDIVSWSSLIVGYAQFGLG 645
Query: 415 DQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYL 474
+ALNLF M+++ G++P+ V Y +LSACSH G+V++G F+ +M+ GI P+ EH
Sbjct: 646 HEALNLFRMMKNL-GVQPNEVTYLGVLSACSHIGLVEEGWHFYNTMEIELGIPPTREHVS 704
Query: 475 CLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPG 534
C+VDLL RAG A I +M +W LL++C H NV++ E AA+N+L L+P
Sbjct: 705 CMVDLLARAGCLYEAENFIKKMGFNPDITMWKTLLASCKTHGNVDIAERAAENILKLDPS 764
Query: 535 STGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHL 594
++ +L++N+ S G WKE A R LM + K PG S + + + VF + D SH
Sbjct: 765 NSAALVLLSNIHASVGNWKEVARLRNLMKQMGVQKVPGQSWIAVKDQIHVFFSEDNSHQQ 824
Query: 595 SVDIRKTLKELHIKLLEAGY 614
DI L++L +++L+ GY
Sbjct: 825 RGDIYTMLEDLWLQMLDDGY 844
Score = 194 bits (492), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 135/493 (27%), Positives = 236/493 (47%), Gaps = 26/493 (5%)
Query: 11 FEETLSTY-------SSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQ 63
+ E L T+ S L++ +GN ++ AC +I S+ GK++H H+LK Q
Sbjct: 137 YREALDTFNFHPKNSSIQLESSTYGN------LILACTSIRSLKYGKKIHDHILKSNCQP 190
Query: 64 DAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKE 123
D +Q +++MY KC +RK D M +LR+VVSW +IS +S+ ++AI++ +
Sbjct: 191 DLVLQNHILNMYGKCGSLKDARKAFDTM--QLRNVVSWTIMISGYSQNGQENDAIIMYIQ 248
Query: 124 MWVLGLELSASTFVSVVSGCSFRQGI----SMHCCVYKLGLLNNEIPLANSVMSMYAKFG 179
M G TF S++ C I +H V K G ++ + N+++SMY +FG
Sbjct: 249 MLQSGYFPDPLTFGSIIKACCIAGDIDLGRQLHGHVIKSG-YDHHLIAQNALISMYTRFG 307
Query: 180 KVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSV-TPDLVVFLNLI 238
++ A +F I ++SW ++I G+ +G EA L M R P+ +F ++
Sbjct: 308 QIVHASDVFTMISTKDLISWASMITGFTQLGYEIEALYLFRDMFRQGFYQPNEFIFGSVF 367
Query: 239 LGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVF 298
C + +H + K G L MY K G L A R F + +
Sbjct: 368 SACRSLLEPEFGRQIHGMCAKFGLGRNVFAGCSLCDMYAKFGFLPSAIRAFYQIESPDLV 427
Query: 299 LWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYI 358
W ++I ++ G +EA+ F +++ T + P+ T + L AC ++++G +I YI
Sbjct: 428 SWNAIIAAFSDSGDVNEAIYFFCQMMHTGLMPDGITFLSLLCACGSPVTINQGTQIHSYI 487
Query: 359 VLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDK-DLAVWSAMINGYAIHGMGDQA 417
+ GL+ V SL+ M++KC ++ A VF+ V + +L W+A+++ H +
Sbjct: 488 IKIGLDKEAAVCNSLLTMYTKCSNLHDAFNVFKDVSENANLVSWNAILSACLQHKQAGEV 547
Query: 418 LNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFK-SMQSNFGIEPSIEHYLCL 476
LF M E KPD + T+IL C+ ++ G S++S ++ S+ + L
Sbjct: 548 FRLFKLMLFSEN-KPDNITITTILGTCAELASLEVGNQVHCFSVKSGLVVDVSVSNR--L 604
Query: 477 VDLLGRAGRFDLA 489
+D+ + G A
Sbjct: 605 IDMYAKCGSLKHA 617
Score = 182 bits (461), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 114/392 (29%), Positives = 190/392 (48%), Gaps = 8/392 (2%)
Query: 129 LELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEA 184
++L +ST+ +++ C S + G +H + K ++ L N +++MY K G + +A
Sbjct: 153 IQLESSTYGNLILACTSIRSLKYGKKIHDHILKSNC-QPDLVLQNHILNMYGKCGSLKDA 211
Query: 185 RSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQV 244
R FD + ++VSWT +I GY G N+A + QM + PD + F ++I C
Sbjct: 212 RKAFDTMQLRNVVSWTIMISGYSQNGQENDAIIMYIQMLQSGYFPDPLTFGSIIKACCIA 271
Query: 245 GNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMI 304
G++ L +H ++KSGY++ N L+SMYT+ G + A VF + K + W SMI
Sbjct: 272 GDIDLGRQLHGHVIKSGYDHHLIAQNALISMYTRFGQIVHASDVFTMISTKDLISWASMI 331
Query: 305 GGYAQLGYPSEAVNLFKRLLKTSV-RPNEATLATTLSACAELGSLSKGKEIEEYIVLNGL 363
G+ QLGY EA+ LF+ + + +PNE + SAC L G++I GL
Sbjct: 332 TGFTQLGYEIEALYLFRDMFRQGFYQPNEFIFGSVFSACRSLLEPEFGRQIHGMCAKFGL 391
Query: 364 ESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYK 423
N SL M++K G + A F ++ DL W+A+I ++ G ++A+ F +
Sbjct: 392 GRNVFAGCSLCDMYAKFGFLPSAIRAFYQIESPDLVSWNAIIAAFSDSGDVNEAIYFFCQ 451
Query: 424 MQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRA 483
M H GL PD + + S+L AC ++ G S G++ L+ + +
Sbjct: 452 MMHT-GLMPDGITFLSLLCACGSPVTINQGTQ-IHSYIIKIGLDKEAAVCNSLLTMYTKC 509
Query: 484 GRFDLALKTIHEMPVEVQAQVWAPLLSACMKH 515
A ++ W +LSAC++H
Sbjct: 510 SNLHDAFNVFKDVSENANLVSWNAILSACLQH 541
>gi|222617261|gb|EEE53393.1| hypothetical protein OsJ_36441 [Oryza sativa Japonica Group]
Length = 1151
Score = 368 bits (945), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 195/622 (31%), Positives = 340/622 (54%), Gaps = 10/622 (1%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+I G E L + M +G+ + T +L ACA++ + G ++HS++ K G
Sbjct: 215 LISGHAQCGHGEHALEIFEEMQFSGLSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAG 274
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLND--EAI 118
D ++ L+D+Y KC D ++ + + +VV WN ++ A + +ND ++
Sbjct: 275 ISSDYIMEGSLLDLYVKCGDVETALVIFNSSD--RTNVVLWNLMLVAFGQ--INDLAKSF 330
Query: 119 LVLKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGL---LNNEIPLANSVMSMY 175
+ +M G+ + T+ ++ C+ + I + ++ L + +++ ++ ++ MY
Sbjct: 331 ELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQIHSLSVKTGFESDMYVSGVLIDMY 390
Query: 176 AKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFL 235
+K+G + +AR + + + E +VSWT++I GYV +A +M++ + PD +
Sbjct: 391 SKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHECCKDALAAFKEMQKCGIWPDNIGLA 450
Query: 236 NLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEK 295
+ I GCA + + L +H+ + SGY+ + + N LV++Y +CG + A F+ + K
Sbjct: 451 SAISGCAGINAMRQGLQIHARIYVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEMELK 510
Query: 296 SVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIE 355
++ G+AQ G EA+ +F R+ ++ V+ N T + LSA A L + +GK+I
Sbjct: 511 DGITGNGLVSGFAQSGLHEEALKVFMRMDQSGVKHNVFTFVSALSASANLAEIKQGKQIH 570
Query: 356 EYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGD 415
++ G +V +LI ++ KCG AK F + +++ W+ +I + HG G
Sbjct: 571 ARVIKTGHSFETEVGNALISLYGKCGSFEDAKMEFSEMSERNEVSWNTIITSCSQHGRGL 630
Query: 416 QALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLC 475
+AL+LF +M+ EG+KP+ V + +L+ACSH G+V++GLS+FKSM +GI P +HY C
Sbjct: 631 EALDLFDQMKK-EGIKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSDEYGIRPRPDHYAC 689
Query: 476 LVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGS 535
++D+ GRAG+ D A K I EMP+ A VW LLSAC H N+E+GE+AAK+LL L P
Sbjct: 690 VIDIFGRAGQLDRAKKFIEEMPIAADAMVWRTLLSACKVHKNIEVGEFAAKHLLELEPHD 749
Query: 536 TGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLS 595
+ +Y+L++N + W R +M DR + KEPG S +E+ V F GDR H L+
Sbjct: 750 SASYVLLSNAYAVTEKWANRDQVRKMMRDRGVRKEPGRSWIEVKNVVHAFFVGDRLHPLA 809
Query: 596 VDIRKTLKELHIKLLEAGYIAE 617
I L ++ ++ + GY E
Sbjct: 810 EQIYNFLAVINDRVAKVGYKQE 831
Score = 239 bits (609), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 142/520 (27%), Positives = 267/520 (51%), Gaps = 12/520 (2%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
M+ NG EE L Y M + GV + VL +C G+ +H+ K G
Sbjct: 114 MLSGYAQNGLGEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHG 173
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F + FV +I +Y +C F + +V +MP R V++N++IS H++ + A+ +
Sbjct: 174 FCSEIFVGNAVITLYLRCGSFRLAERVFCDMP--HRDTVTFNTLISGHAQCGHGEHALEI 231
Query: 121 LKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
+EM GL T S+++ C+ ++G +H ++K G+ ++ I + S++ +Y
Sbjct: 232 FEEMQFSGLSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYI-MEGSLLDLYV 290
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K G V A IF+ T++V W ++ + + ++ ++F L QM+ + P+ +
Sbjct: 291 KCGDVETALVIFNSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTYPC 350
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
++ C + L +HSL +K+G+ ++ + +L+ MY+K G LE ARRV + + EK
Sbjct: 351 ILRTCTCTREIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKD 410
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEE 356
V WTSMI GY Q +A+ FK + K + P+ LA+ +S CA + ++ +G +I
Sbjct: 411 VVSWTSMIAGYVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQIHA 470
Query: 357 YIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQ 416
I ++G + + +L++++++CGRI +A FE + KD + +++G+A G+ ++
Sbjct: 471 RIYVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEMELKDGITGNGLVSGFAQSGLHEE 530
Query: 417 ALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFF-KSMQSNFGIEPSIEHYLC 475
AL +F +M G+K + + S LSA ++ + G + +++ E + +
Sbjct: 531 ALKVFMRMDQ-SGVKHNVFTFVSALSASANLAEIKQGKQIHARVIKTGHSFETEVGN--A 587
Query: 476 LVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKH 515
L+ L G+ G F+ A EM E W ++++C +H
Sbjct: 588 LISLYGKCGSFEDAKMEFSEMS-ERNEVSWNTIITSCSQH 626
Score = 216 bits (549), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 136/472 (28%), Positives = 237/472 (50%), Gaps = 10/472 (2%)
Query: 33 FPLVLKACANINSIWDG-KRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEM 91
F L+AC W +H+ + G + V LID+YSK + +R+V +E+
Sbjct: 44 FACALRACRGNGRRWQVVPEIHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEEL 103
Query: 92 PVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCS----FRQ 147
R VSW +++S +++ L +EA+ + ++M G+ + SV+S C+ F Q
Sbjct: 104 SAR--DNVSWVAMLSGYAQNGLGEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQ 161
Query: 148 GISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYV 207
G +H YK G + EI + N+V+++Y + G A +F ++ V++ T+I G+
Sbjct: 162 GRLIHAQGYKHGFCS-EIFVGNAVITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHA 220
Query: 208 NVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDP 267
G+ A + +M+ ++PD V +L+ CA +G+L +HS L K+G +++
Sbjct: 221 QCGHGEHALEIFEEMQFSGLSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYI 280
Query: 268 LDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTS 327
++ L+ +Y KCGD+E A +F++ +V LW M+ + Q+ +++ LF ++
Sbjct: 281 MEGSLLDLYVKCGDVETALVIFNSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAG 340
Query: 328 VRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAK 387
+RPN+ T L C + G++I V G ES+ V LI M+SK G + KA+
Sbjct: 341 IRPNQFTYPCILRTCTCTREIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKAR 400
Query: 388 EVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHS 447
V E + +KD+ W++MI GY H AL F +MQ G+ PD + S +S C+
Sbjct: 401 RVLEMLKEKDVVSWTSMIAGYVQHECCKDALAAFKEMQKC-GIWPDNIGLASAISGCAGI 459
Query: 448 GMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVE 499
+ GL + + G + + LV+L R GR A + EM ++
Sbjct: 460 NAMRQGLQIHARIYVS-GYSGDVSIWNALVNLYARCGRIREAFSSFEEMELK 510
>gi|302754942|ref|XP_002960895.1| hypothetical protein SELMODRAFT_74842 [Selaginella moellendorffii]
gi|300171834|gb|EFJ38434.1| hypothetical protein SELMODRAFT_74842 [Selaginella moellendorffii]
Length = 903
Score = 368 bits (945), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 214/629 (34%), Positives = 335/629 (53%), Gaps = 17/629 (2%)
Query: 2 IRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGF 61
I + +G L + M GV T + L CA I + +H V + G
Sbjct: 200 IAANAQSGDLGIALELFQRMQLEGVRPARITLVIALTVCATIR---QAQAIHFIVRESGL 256
Query: 62 QQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVL 121
+Q V T L Y++ +++V D R VVSWN+++ A+++ EA L+
Sbjct: 257 EQTLVVSTALASAYARLGHLYQAKEVFDRAAER--DVVSWNAMLGAYAQHGHMSEAALLF 314
Query: 122 KEMWVLGLELSASTFVSVVSGCS-FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGK 180
M G+ S T V+ +GCS R G +H C + GL + +I L N+++ MY + G
Sbjct: 315 ARMLHEGISPSKVTLVNASTGCSSLRFGRMIHGCALEKGL-DRDIVLGNALLDMYTRCGS 373
Query: 181 VNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILG 240
EAR +F I + VSW T+I G G + A L +M+ + P +LNL+
Sbjct: 374 PEEARHLFKRI-PCNAVSWNTMIAGSSQKGQMKRAVELFQRMQLEGMAPVRATYLNLLEA 432
Query: 241 CAQVGNLFLALS----MHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFD-AVLEK 295
A A++ +HS ++ GY +E + +V MY CG ++ A F +E
Sbjct: 433 VASNPEEARAMAEGRKLHSRIVSCGYASEPAIGTAVVKMYASCGAIDEAAASFQRGAMED 492
Query: 296 --SVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKE 353
V W ++I +Q G+ A+ F+R+ V PN+ T L ACA +L++G+
Sbjct: 493 RHDVVSWNAIISSLSQHGHGKRALGFFRRMDLHGVAPNQITCVAVLDACAGAAALTEGEI 552
Query: 354 IEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVP-DKDLAVWSAMINGYAIHG 412
+ +++ +G+ESN V T+L M+ +CG + A+E+FE+V ++D+ +++AMI Y+ +G
Sbjct: 553 VHDHLRHSGMESNLFVATALASMYGRCGSLESAREIFEKVAVERDVVIFNAMIAAYSQNG 612
Query: 413 MGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEH 472
+ +AL LF++MQ EG +PD + S+LSACSH G+ D+G F+SM+ ++GI PS +H
Sbjct: 613 LAGEALKLFWRMQQ-EGSRPDEQSFVSVLSACSHGGLADEGWEIFRSMRQSYGIAPSEDH 671
Query: 473 YLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLN 532
Y C VD+LGRAG A + I M V+ VW LL AC K+ +V+ G A + L+
Sbjct: 672 YACAVDVLGRAGWLADAEELIRCMDVKPTVLVWKTLLGACRKYRDVDRGRLANSMVRELD 731
Query: 533 PGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSH 592
PG Y++++N+ AG W EAA R M+ R L KE G S +EI V FVAGDRSH
Sbjct: 732 PGDESAYVVLSNILAGAGKWDEAAEVRTEMESRGLRKEAGKSWIEIKSRVHEFVAGDRSH 791
Query: 593 HLSVDIRKTLKELHIKLLEAGYIAEADIV 621
S +I + L+ LH ++ E GY+ + +V
Sbjct: 792 PRSEEIYRELERLHAEIREIGYVPDTRLV 820
Score = 224 bits (572), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 141/519 (27%), Positives = 271/519 (52%), Gaps = 18/519 (3%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+I T +G + + + M Q GV ++ TF VLKACA + + G+ +H+ +++ G
Sbjct: 99 IITAYTEHGQAKRAIGMFHRMQQEGVRCDAVTFLAVLKACARLGDLSQGRSIHAWIVESG 158
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+ + + L+ +Y C S+ + ++M R +VSWN+ I+A++++ A+ +
Sbjct: 159 LKGKSVLANLLLHIYGSCGCVASAMLLFEKME---RDLVSWNAAIAANAQSGDLGIALEL 215
Query: 121 LKEMWVLGLELSASTFVSVVSGC-SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFG 179
+ M + G+ + T V ++ C + RQ ++H V + G L + ++ ++ S YA+ G
Sbjct: 216 FQRMQLEGVRPARITLVIALTVCATIRQAQAIHFIVRESG-LEQTLVVSTALASAYARLG 274
Query: 180 KVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLIL 239
+ +A+ +FD E +VSW ++G Y G+++EA L +M ++P V +N
Sbjct: 275 HLYQAKEVFDRAAERDVVSWNAMLGAYAQHGHMSEAALLFARMLHEGISPSKVTLVNAST 334
Query: 240 GCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFL 299
GC+ +L +H L+ G + + L N L+ MYT+CG E AR +F + +V
Sbjct: 335 GCS---SLRFGRMIHGCALEKGLDRDIVLGNALLDMYTRCGSPEEARHLFKRIPCNAVS- 390
Query: 300 WTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACA----ELGSLSKGKEIE 355
W +MI G +Q G AV LF+R+ + P AT L A A E ++++G+++
Sbjct: 391 WNTMIAGSSQKGQMKRAVELFQRMQLEGMAPVRATYLNLLEAVASNPEEARAMAEGRKLH 450
Query: 356 EYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFER--VPDK-DLAVWSAMINGYAIHG 412
IV G S + T+++ M++ CG I++A F+R + D+ D+ W+A+I+ + HG
Sbjct: 451 SRIVSCGYASEPAIGTAVVKMYASCGAIDEAAASFQRGAMEDRHDVVSWNAIISSLSQHG 510
Query: 413 MGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEH 472
G +AL F +M + G+ P+ + ++L AC+ + + +G ++ + G+E ++
Sbjct: 511 HGKRALGFFRRMD-LHGVAPNQITCVAVLDACAGAAALTEGEIVHDHLRHS-GMESNLFV 568
Query: 473 YLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSA 511
L + GR G + A + ++ VE ++ +++A
Sbjct: 569 ATALASMYGRCGSLESAREIFEKVAVERDVVIFNAMIAA 607
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 130/491 (26%), Positives = 239/491 (48%), Gaps = 27/491 (5%)
Query: 36 VLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRL 95
+L+A + + G+R+H+ ++ +G +++ + L+ +Y KC +V + VR
Sbjct: 35 LLRAAGDDRLLSQGRRIHARIVSLGLEEE--LGNHLLRLYLKCESLGDVEEVFSRLEVR- 91
Query: 96 RSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCS----FRQGISM 151
SW +II+A++ AI + M G+ A TF++V+ C+ QG S+
Sbjct: 92 -DEASWTTIITAYTEHGQAKRAIGMFHRMQQEGVRCDAVTFLAVLKACARLGDLSQGRSI 150
Query: 152 HCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGN 211
H + + GL + LAN ++ +Y G V A +F+++ E +VSW I G+
Sbjct: 151 HAWIVESGLKGKSV-LANLLLHIYGSCGCVASAMLLFEKM-ERDLVSWNAAIAANAQSGD 208
Query: 212 VNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNL 271
+ A L +M+ V P + + + CA + A ++H ++ +SG +
Sbjct: 209 LGIALELFQRMQLEGVRPARITLVIALTVCATIRQ---AQAIHFIVRESGLEQTLVVSTA 265
Query: 272 LVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPN 331
L S Y + G L A+ VFD E+ V W +M+G YAQ G+ SEA LF R+L + P+
Sbjct: 266 LASAYARLGHLYQAKEVFDRAAERDVVSWNAMLGAYAQHGHMSEAALLFARMLHEGISPS 325
Query: 332 EATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFE 391
+ TL + C+ SL G+ I + GL+ + + +L+ M+++CG +A+ +F+
Sbjct: 326 KVTLVNASTGCS---SLRFGRMIHGCALEKGLDRDIVLGNALLDMYTRCGSPEEARHLFK 382
Query: 392 RVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVD 451
R+P ++ W+ MI G + G +A+ LF +MQ +EG+ P Y ++L A + +
Sbjct: 383 RIPCNAVS-WNTMIAGSSQKGQMKRAVELFQRMQ-LEGMAPVRATYLNLLEAVASNPEEA 440
Query: 452 DGLSFFKSMQSN-----FGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQV-- 504
++ + + S + EP+I +V + G D A + +E + V
Sbjct: 441 RAMAEGRKLHSRIVSCGYASEPAIG--TAVVKMYASCGAIDEAAASFQRGAMEDRHDVVS 498
Query: 505 WAPLLSACMKH 515
W ++S+ +H
Sbjct: 499 WNAIISSLSQH 509
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 77/144 (53%), Gaps = 1/144 (0%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+I + + +G + L + M GV N T VL ACA ++ +G+ VH H+ G
Sbjct: 502 IISSLSQHGHGKRALGFFRRMDLHGVAPNQITCVAVLDACAGAAALTEGEIVHDHLRHSG 561
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+ + FV T L MY +C S+R++ +++ V R VV +N++I+A+S+ L EA+ +
Sbjct: 562 MESNLFVATALASMYGRCGSLESAREIFEKVAVE-RDVVIFNAMIAAYSQNGLAGEALKL 620
Query: 121 LKEMWVLGLELSASTFVSVVSGCS 144
M G +FVSV+S CS
Sbjct: 621 FWRMQQEGSRPDEQSFVSVLSACS 644
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 71/130 (54%), Gaps = 5/130 (3%)
Query: 327 SVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKA 386
+ RP A L L A + LS+G+ I IV GLE ++ L+ ++ KC +
Sbjct: 26 ATRP--AHLVRLLRAAGDDRLLSQGRRIHARIVSLGLEE--ELGNHLLRLYLKCESLGDV 81
Query: 387 KEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSH 446
+EVF R+ +D A W+ +I Y HG +A+ +F++MQ EG++ DAV + ++L AC+
Sbjct: 82 EEVFSRLEVRDEASWTTIITAYTEHGQAKRAIGMFHRMQQ-EGVRCDAVTFLAVLKACAR 140
Query: 447 SGMVDDGLSF 456
G + G S
Sbjct: 141 LGDLSQGRSI 150
>gi|3297823|emb|CAA19881.1| putative protein [Arabidopsis thaliana]
gi|7270348|emb|CAB80116.1| putative protein [Arabidopsis thaliana]
Length = 844
Score = 368 bits (945), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 211/629 (33%), Positives = 352/629 (55%), Gaps = 35/629 (5%)
Query: 1 MIRNSTNNGSFEETLSTYS-SMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKV 59
MI G+ E + +S ML +G+ + TFP VLKAC ++ DG ++H LK
Sbjct: 56 MISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKAC---RTVIDGNKIHCLALKF 112
Query: 60 GFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAIL 119
GF D +V LI +YS+ ++R + DEMPVR + SWN++IS + ++ EA+
Sbjct: 113 GFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVR--DMGSWNAMISGYCQSGNAKEALT 170
Query: 120 VLKEMWVLGLE-LSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSM 174
+ GL + + T VS++S C+ F +G+++H K GL +E+
Sbjct: 171 LSN-----GLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGL-ESEL--------- 215
Query: 175 YAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVF 234
+ + + +FD + ++SW +II Y A L +MR + PD +
Sbjct: 216 ------LRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTL 269
Query: 235 LNLILGCAQVGNLFLALSMHSLLLKSGYNNED-PLDNLLVSMYTKCGDLELARRVFDAVL 293
++L +Q+G++ S+ L+ G+ ED + N +V MY K G ++ AR VF+ +
Sbjct: 270 ISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLP 329
Query: 294 EKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKT-SVRPNEATLATTLSACAELGSLSKGK 352
V W ++I GYAQ G+ SEA+ ++ + + + N+ T + L AC++ G+L +G
Sbjct: 330 NTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGM 389
Query: 353 EIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHG 412
++ ++ NGL + V TSL M+ KCGR+ A +F ++P + W+ +I + HG
Sbjct: 390 KLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHG 449
Query: 413 MGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEH 472
G++A+ LF +M EG+KPD + + ++LSACSHSG+VD+G F+ MQ+++GI PS++H
Sbjct: 450 HGEKAVMLFKEMLD-EGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKH 508
Query: 473 YLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLN 532
Y C+VD+ GRAG+ + ALK I M ++ A +W LLSAC H NV+LG+ A+++L +
Sbjct: 509 YGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVE 568
Query: 533 PGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSH 592
P G ++L++N++ SAG W+ R + + L K PGWS +E+D V+VF G+++H
Sbjct: 569 PEHVGYHVLLSNMYASAGKWEGVDEIRSIAHGKGLRKTPGWSSMEVDNKVEVFYTGNQTH 628
Query: 593 HLSVDIRKTLKELHIKLLEAGYIAEADIV 621
+ ++ + L L KL GY+ + V
Sbjct: 629 PMYEEMYRELTALQAKLKMIGYVPDHRFV 657
Score = 98.6 bits (244), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 75/265 (28%), Positives = 128/265 (48%), Gaps = 30/265 (11%)
Query: 188 FDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMS--VTPDLVVFLNLILGCAQV- 244
FD I + +W +I GY GN +E C + +S +TPD F +++ C V
Sbjct: 42 FDHIQNRDVYAWNLMISGYGRAGNSSEVI-RCFSLFMLSSGLTPDYRTFPSVLKACRTVI 100
Query: 245 -GNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSM 303
GN +H L LK G+ + + L+ +Y++ + AR +FD + + + W +M
Sbjct: 101 DGN-----KIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAM 155
Query: 304 IGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGL 363
I GY Q G EA+ L L + T+ + LSAC E G ++G I Y + +GL
Sbjct: 156 ISGYCQSGNAKEALTLSNGLRAM----DSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGL 211
Query: 364 ESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYK 423
ES + C ++VF+R+ +DL W+++I Y ++ +A++LF +
Sbjct: 212 ESE---------LLRDC------QKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQE 256
Query: 424 MQHVEGLKPDAVVYTSILSACSHSG 448
M+ + ++PD + S+ S S G
Sbjct: 257 MR-LSRIQPDCLTLISLASILSQLG 280
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 88/170 (51%), Gaps = 11/170 (6%)
Query: 288 VFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKR-LLKTSVRPNEATLATTLSACAELG 346
FD + + V+ W MI GY + G SE + F +L + + P+ T + L AC
Sbjct: 41 TFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACR--- 97
Query: 347 SLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMIN 406
++ G +I + G + V SLIH++S+ + A+ +F+ +P +D+ W+AMI+
Sbjct: 98 TVIDGNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMIS 157
Query: 407 GYAIHGMGDQALNLFYKMQHVEGLKP-DAVVYTSILSACSHSGMVDDGLS 455
GY G +AL L GL+ D+V S+LSAC+ +G + G++
Sbjct: 158 GYCQSGNAKEALTL------SNGLRAMDSVTVVSLLSACTEAGDFNRGVT 201
Score = 45.4 bits (106), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 62/152 (40%), Gaps = 13/152 (8%)
Query: 384 NKAK-EVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILS 442
NK+K F+ + ++D+ W+ MI+GY G + + F GL PD + S+L
Sbjct: 35 NKSKMHTFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLK 94
Query: 443 ACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQA 502
AC V DG + + FG + L+ L R A EMPV
Sbjct: 95 ACR---TVIDG-NKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMG 150
Query: 503 QVWAPLLSACMKHHNVELGEYAAKNLLTLNPG 534
W ++S + N AK LTL+ G
Sbjct: 151 S-WNAMISGYCQSGN-------AKEALTLSNG 174
>gi|255586261|ref|XP_002533783.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223526284|gb|EEF28596.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 672
Score = 368 bits (945), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 207/618 (33%), Positives = 330/618 (53%), Gaps = 8/618 (1%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
M+ G + + M NS TF VL CA+ G ++H V+ G
Sbjct: 44 MLNGFVKCGEPNSAVKVFEDMRNCQTKPNSITFASVLSICASEALSEFGNQLHGLVISCG 103
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F D V L+ MYSK + K+ + MP +VV+WN +I+ + DEA L+
Sbjct: 104 FHFDPLVANALVAMYSKFGQLSDALKLFNTMPDT--NVVTWNGMIAGFVQNGFMDEASLL 161
Query: 121 LKEMWVLGLELSASTFVS----VVSGCSFRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
EM G+ + TF S V S +QG +H + + G+ ++ L ++++ +Y
Sbjct: 162 FSEMISAGVSPDSITFASFLPSVTESASLKQGKEIHGYILRHGIAL-DVFLKSALIDIYF 220
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K V A IF + IV T II GYV G N+A + + ++P+ V +
Sbjct: 221 KCRDVGMACKIFKQSTNVDIVVCTAIISGYVLNGLNNDALEIFRWLLEEKMSPNAVTLAS 280
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
++ CA + L L +H+ +LK G + + + ++ MY KCG L+LA ++F + EK
Sbjct: 281 VLPACAGLATLNLGKELHANILKHGLDERRHVGSAIMDMYAKCGRLDLAYQIFRRMPEKD 340
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEE 356
W ++I +Q G P EA++LF+++ + + + +++ LSACA L +L GK I
Sbjct: 341 AVCWNAIITNCSQNGKPQEAIDLFRQMGREGLSYDCVSISAALSACANLPALHHGKAIHS 400
Query: 357 YIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQ 416
+++ +S +++LI M+ KCG ++ A+ VF+ + +K+ W+++I Y HG +
Sbjct: 401 FMIKGAFDSEVFAESALIDMYGKCGNLSVARCVFDMMREKNEVSWNSIIAAYGSHGHLEV 460
Query: 417 ALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCL 476
+L LF+KM +G++PD V + +ILSAC H+G VD G+ +F+ M +GI +EHY C+
Sbjct: 461 SLALFHKMLE-DGIQPDHVTFLTILSACGHAGQVDKGIQYFRCMTEEYGIPARMEHYACI 519
Query: 477 VDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGST 536
VDL GRAGR + A +TI MP VW LL AC H NVEL E A++ LL L+P ++
Sbjct: 520 VDLFGRAGRLNEAFETIKNMPFSPDDGVWGTLLGACRVHGNVELAEVASRCLLDLDPENS 579
Query: 537 GNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSV 596
G Y+L++N+ AG W R LM R + K PG+S +E++ + +FVA D SH S
Sbjct: 580 GCYVLLSNVHADAGQWGSVRKIRSLMKKRGVQKVPGYSWIEVNKTTHMFVAADGSHPESA 639
Query: 597 DIRKTLKELHIKLLEAGY 614
I L L ++L + GY
Sbjct: 640 QIYSVLNNLLLELRKEGY 657
Score = 225 bits (573), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 144/519 (27%), Positives = 279/519 (53%), Gaps = 16/519 (3%)
Query: 59 VGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAI 118
+GF D FV + LI +Y++ +R++ D+MP + V WN +++ + + A+
Sbjct: 1 MGFNVDEFVGSSLIKLYAENGCIEDARRLFDKMPNK--DCVLWNVMLNGFVKCGEPNSAV 58
Query: 119 LVLKEMWVLGLELSASTFVSVVSGCSFRQ----GISMHCCVYKLGLLNNEIPLANSVMSM 174
V ++M + ++ TF SV+S C+ G +H V G + + +AN++++M
Sbjct: 59 KVFEDMRNCQTKPNSITFASVLSICASEALSEFGNQLHGLVISCGFHFDPL-VANALVAM 117
Query: 175 YAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVF 234
Y+KFG++++A +F+ + +T++V+W +I G+V G ++EA L ++M V+PD + F
Sbjct: 118 YSKFGQLSDALKLFNTMPDTNVVTWNGMIAGFVQNGFMDEASLLFSEMISAGVSPDSITF 177
Query: 235 LNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLE 294
+ + + +L +H +L+ G + L + L+ +Y KC D+ +A ++F
Sbjct: 178 ASFLPSVTESASLKQGKEIHGYILRHGIALDVFLKSALIDIYFKCRDVGMACKIFKQSTN 237
Query: 295 KSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEI 354
+ + T++I GY G ++A+ +F+ LL+ + PN TLA+ L ACA L +L+ GKE+
Sbjct: 238 VDIVVCTAIISGYVLNGLNNDALEIFRWLLEEKMSPNAVTLASVLPACAGLATLNLGKEL 297
Query: 355 EEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMG 414
I+ +GL+ R V ++++ M++KCGR++ A ++F R+P+KD W+A+I + +G
Sbjct: 298 HANILKHGLDERRHVGSAIMDMYAKCGRLDLAYQIFRRMPEKDAVCWNAIITNCSQNGKP 357
Query: 415 DQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSM-QSNFGIEPSIEHY 473
+A++LF +M EGL D V ++ LSAC++ + G + M + F E E
Sbjct: 358 QEAIDLFRQMGR-EGLSYDCVSISAALSACANLPALHHGKAIHSFMIKGAFDSEVFAES- 415
Query: 474 LCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNP 533
L+D+ G+ G +A + + +M E W +++A H ++E+ + L
Sbjct: 416 -ALIDMYGKCGNLSVA-RCVFDMMREKNEVSWNSIIAAYGSHGHLEVSLALFHKM--LED 471
Query: 534 GSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPG 572
G +++ + ++ G +G+ R +T+E G
Sbjct: 472 GIQPDHVTFLTILSACG--HAGQVDKGIQYFRCMTEEYG 508
>gi|359481919|ref|XP_003632692.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Vitis vinifera]
Length = 1053
Score = 368 bits (944), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 190/515 (36%), Positives = 297/515 (57%), Gaps = 6/515 (1%)
Query: 112 CLNDEAILVLKEMWVLGLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPL 167
C N + L EM + GLE+ + SV++ C + R+G +H + K + L
Sbjct: 456 CSNRQLKEALLEMGIQGLEVEFQGYDSVLTECISQTAIREGQRVHAHMIKT-CYEPPVYL 514
Query: 168 ANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSV 227
++ +Y K + +AR + DE+ E ++VSWT +I GY G +EA L +M
Sbjct: 515 RTRLIVLYNKCRCLGDARRVLDEMPERNVVSWTAMISGYSQRGYASEALHLFVEMLMSGT 574
Query: 228 TPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARR 287
P+ F ++ C L +HSL++K+ + + + + L+ MY K G + ARR
Sbjct: 575 APNEFTFATVLTSCTSSSGFQLGRQIHSLVIKTSFESHIFVGSSLLDMYAKAGKICEARR 634
Query: 288 VFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGS 347
VFD + E+ V T++I GYAQLG EA++LF+RL + +R N T A+ L+A + L +
Sbjct: 635 VFDGLPERDVVSCTAIISGYAQLGLDEEALDLFRRLQREGMRSNYVTYASVLTALSGLAA 694
Query: 348 LSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMING 407
L G+++ +++ L +Q SLI M+SKCG + ++ +F+ +P++ + W+AM+ G
Sbjct: 695 LDHGRQVHSHVLRAKLPFYVVLQNSLIDMYSKCGSLTYSRRIFDSMPERTVISWNAMLVG 754
Query: 408 YAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSM-QSNFGI 466
Y+ HG+G +A+ LF M+ +KPD+V + ++LS CSH GM D GL F M G
Sbjct: 755 YSKHGLGREAVELFKLMKEENKVKPDSVTFLAVLSGCSHGGMEDRGLEIFYEMVNQKDGF 814
Query: 467 EPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAK 526
EP IEHY C+VDL GRAGR + A + I +MP E A +W LL AC H NV +GE+ A+
Sbjct: 815 EPEIEHYGCVVDLFGRAGRVEEAFEFIKKMPFEPTAAIWGSLLGACRVHQNVHIGEFVAR 874
Query: 527 NLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFV 586
LL + + GNY++++NL+ SAG W + T R LM ++ + KEPG S +E+D ++ F
Sbjct: 875 RLLEIESENAGNYVILSNLYASAGRWDDVRTVRELMKEKAVIKEPGRSWIELDQTLHTFH 934
Query: 587 AGDRSHHLSVDIRKTLKELHIKLLEAGYIAEADIV 621
A DRSH ++ ++EL IK+ EAGY+ E V
Sbjct: 935 ASDRSHPRKEEVFAKVRELSIKIKEAGYVPELSCV 969
Score = 217 bits (552), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 130/404 (32%), Positives = 225/404 (55%), Gaps = 16/404 (3%)
Query: 20 SMLQTGVHGNSFTFP---LVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYS 76
++L+ G+ G F VL C + +I +G+RVH+H++K ++ +++T LI +Y+
Sbjct: 464 ALLEMGIQGLEVEFQGYDSVLTECISQTAIREGQRVHAHMIKTCYEPPVYLRTRLIVLYN 523
Query: 77 KCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTF 136
KC +R+VLDEMP R+VVSW ++IS +S+ EA+ + EM + G + TF
Sbjct: 524 KCRCLGDARRVLDEMPE--RNVVSWTAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTF 581
Query: 137 VSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIG 192
+V++ C+ F+ G +H V K + I + +S++ MYAK GK+ EAR +FD +
Sbjct: 582 ATVLTSCTSSSGFQLGRQIHSLVIKTS-FESHIFVGSSLLDMYAKAGKICEARRVFDGLP 640
Query: 193 ETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALS 252
E +VS T II GY +G EA L +++R + + V + +++ + + L
Sbjct: 641 ERDVVSCTAIISGYAQLGLDEEALDLFRRLQREGMRSNYVTYASVLTALSGLAALDHGRQ 700
Query: 253 MHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGY 312
+HS +L++ L N L+ MY+KCG L +RR+FD++ E++V W +M+ GY++ G
Sbjct: 701 VHSHVLRAKLPFYVVLQNSLIDMYSKCGSLTYSRRIFDSMPERTVISWNAMLVGYSKHGL 760
Query: 313 PSEAVNLFKRLLK--TSVRPNEATLATTLSACAELGSLSKGKEIEEYIV--LNGLESNRQ 368
EAV LFK L+K V+P+ T LS C+ G +G EI +V +G E +
Sbjct: 761 GREAVELFK-LMKEENKVKPDSVTFLAVLSGCSHGGMEDRGLEIFYEMVNQKDGFEPEIE 819
Query: 369 VQTSLIHMFSKCGRINKAKEVFERVP-DKDLAVWSAMINGYAIH 411
++ +F + GR+ +A E +++P + A+W +++ +H
Sbjct: 820 HYGCVVDLFGRAGRVEEAFEFIKKMPFEPTAAIWGSLLGACRVH 863
Score = 138 bits (348), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 93/313 (29%), Positives = 158/313 (50%), Gaps = 11/313 (3%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI + G E L + ML +G N FTF VL +C + + G+++HS V+K
Sbjct: 549 MISGYSQRGYASEALHLFVEMLMSGTAPNEFTFATVLTSCTSSSGFQLGRQIHSLVIKTS 608
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F+ FV + L+DMY+K +R+V D +P R VVS +IIS +++ L++EA+ +
Sbjct: 609 FESHIFVGSSLLDMYAKAGKICEARRVFDGLPE--RDVVSCTAIISGYAQLGLDEEALDL 666
Query: 121 LKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
+ + G+ + T+ SV++ S G +H V + L + L NS++ MY+
Sbjct: 667 FRRLQREGMRSNYVTYASVLTALSGLAALDHGRQVHSHVLR-AKLPFYVVLQNSLIDMYS 725
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMS-VTPDLVVFL 235
K G + +R IFD + E +++SW ++ GY G EA L M+ + V PD V FL
Sbjct: 726 KCGSLTYSRRIFDSMPERTVISWNAMLVGYSKHGLGREAVELFKLMKEENKVKPDSVTFL 785
Query: 236 NLILGCAQVGNLFLALSMHSLLL--KSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAV- 292
++ GC+ G L + ++ K G+ E +V ++ + G +E A +
Sbjct: 786 AVLSGCSHGGMEDRGLEIFYEMVNQKDGFEPEIEHYGCVVDLFGRAGRVEEAFEFIKKMP 845
Query: 293 LEKSVFLWTSMIG 305
E + +W S++G
Sbjct: 846 FEPTAAIWGSLLG 858
>gi|357127622|ref|XP_003565478.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Brachypodium distachyon]
Length = 870
Score = 368 bits (944), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 207/610 (33%), Positives = 326/610 (53%), Gaps = 9/610 (1%)
Query: 9 GSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQ 68
G E + + M GV +++T VLK A + SI DG+ VH + K+GF V
Sbjct: 175 GDLREGVLLFRKMHCCGVRPDAYTISCVLKCIAGLGSIEDGEVVHGLLEKLGFGSQCAVG 234
Query: 69 TGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLG 128
L+ Y+K + + V D MP R V+SWNS+IS + L D+AI + MW+ G
Sbjct: 235 NALMAFYAKSNRTKDAILVFDGMP--HRDVISWNSMISGCTSNGLYDKAIELFVRMWLEG 292
Query: 129 LELSASTFVSVVSGCSFRQ----GISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEA 184
EL ++T +SV+ C+ G +H K G ++ + LAN ++ MY+
Sbjct: 293 EELDSATLLSVLPACAELHLLFLGRVVHGYSVKTGFIS-QTSLANVLLDMYSNCSDWRST 351
Query: 185 RSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQV 244
IF + + ++VSWT +I Y G ++ GL +M PD+ + + A
Sbjct: 352 NKIFRNMVQKNVVSWTAMITSYTRAGLYDKVAGLFQEMGLEGTRPDIFAITSALHAFAGN 411
Query: 245 GNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMI 304
L S+H +++G + N L+ MY KCG++E A+ +FD V+ K + W ++I
Sbjct: 412 ELLKHGKSVHGYAIRNGMEKVLAVTNALMEMYVKCGNMEEAKLIFDGVVSKDMISWNTLI 471
Query: 305 GGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLE 364
GGY++ +EA +LF +L +RPN T+ L A A L SL +G+E+ Y + G
Sbjct: 472 GGYSRNNLANEAFSLFTEML-LQLRPNAVTMTCILPAAASLSSLERGREMHAYALRRGYL 530
Query: 365 SNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKM 424
+ V +LI M+ KCG + A+ +F+R+ +K+L W+ M+ GY +HG G A+ LF +M
Sbjct: 531 EDDFVANALIDMYVKCGALLLARRLFDRLSNKNLISWTIMVAGYGMHGRGRDAIALFEQM 590
Query: 425 QHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAG 484
+ V G+ PDA +++IL ACSHSG+ D+G FF +M+ IEP ++HY C+VDLL G
Sbjct: 591 R-VSGIAPDAASFSAILYACSHSGLRDEGWRFFDAMRKEHKIEPRLKHYTCMVDLLINTG 649
Query: 485 RFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMAN 544
A + I MP+E + +W LL C H NV+L E A+ + L P +TG Y+L+AN
Sbjct: 650 NLKEAYEFIDSMPIEPDSSIWVSLLRGCRIHRNVKLAEEVAERVFELEPENTGYYVLLAN 709
Query: 545 LFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKE 604
++ A W+ + + R L + G S +E G V VF+A +R+H I + L E
Sbjct: 710 IYAEAERWEAVRKLKNKIGGRGLRENTGCSWIEAKGKVHVFIADNRNHPQGTRIAEFLNE 769
Query: 605 LHIKLLEAGY 614
+ ++ E G+
Sbjct: 770 VAKRMQEEGH 779
Score = 208 bits (529), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 135/460 (29%), Positives = 236/460 (51%), Gaps = 18/460 (3%)
Query: 2 IRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGF 61
I+ +G EE L S GV S+ VL+ C+ + S+ GKR H V
Sbjct: 68 IQRLCRSGDLEEALGLLGS---DGVDDRSYG--AVLQLCSEVRSLEGGKRAHFLVRASSL 122
Query: 62 QQDAF---VQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAI 118
+D + L+ MY KC D ++R+V DEMP ++ V W +++S +++A E +
Sbjct: 123 GRDGMDNVLGQKLVLMYLKCGDLENARRVFDEMP-QVSDVRVWTALMSGYAKAGDLREGV 181
Query: 119 LVLKEMWVLGLELSASTFVSVVSGC-----SFRQGISMHCCVYKLGLLNNEIPLANSVMS 173
L+ ++M G+ A T +S V C S G +H + KLG ++ + N++M+
Sbjct: 182 LLFRKMHCCGVRPDAYT-ISCVLKCIAGLGSIEDGEVVHGLLEKLGF-GSQCAVGNALMA 239
Query: 174 MYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVV 233
YAK + +A +FD + ++SW ++I G + G ++A L +M D
Sbjct: 240 FYAKSNRTKDAILVFDGMPHRDVISWNSMISGCTSNGLYDKAIELFVRMWLEGEELDSAT 299
Query: 234 FLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVL 293
L+++ CA++ LFL +H +K+G+ ++ L N+L+ MY+ C D ++F ++
Sbjct: 300 LLSVLPACAELHLLFLGRVVHGYSVKTGFISQTSLANVLLDMYSNCSDWRSTNKIFRNMV 359
Query: 294 EKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKE 353
+K+V WT+MI Y + G + LF+ + RP+ + + L A A L GK
Sbjct: 360 QKNVVSWTAMITSYTRAGLYDKVAGLFQEMGLEGTRPDIFAITSALHAFAGNELLKHGKS 419
Query: 354 IEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGM 413
+ Y + NG+E V +L+ M+ KCG + +AK +F+ V KD+ W+ +I GY+ + +
Sbjct: 420 VHGYAIRNGMEKVLAVTNALMEMYVKCGNMEEAKLIFDGVVSKDMISWNTLIGGYSRNNL 479
Query: 414 GDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDG 453
++A +LF +M + L+P+AV T IL A + ++ G
Sbjct: 480 ANEAFSLFTEM--LLQLRPNAVTMTCILPAAASLSSLERG 517
Score = 207 bits (527), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 126/420 (30%), Positives = 221/420 (52%), Gaps = 16/420 (3%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI T+NG +++ + + M G +S T VL ACA ++ ++ G+ VH + +K G
Sbjct: 268 MISGCTSNGLYDKAIELFVRMWLEGEELDSATLLSVLPACAELHLLFLGRVVHGYSVKTG 327
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F + L+DMYS CSD+ S+ K+ M ++VVSW ++I++++RA L D+ +
Sbjct: 328 FISQTSLANVLLDMYSNCSDWRSTNKIFRNMVQ--KNVVSWTAMITSYTRAGLYDKVAGL 385
Query: 121 LKEMWVLGLELSASTFVSVVSGCS-------FRQGISMHCCVYKLGLLNNEIPLANSVMS 173
+EM GLE + ++ S + G S+H + G + + + N++M
Sbjct: 386 FQEM---GLEGTRPDIFAITSALHAFAGNELLKHGKSVHGYAIRNG-MEKVLAVTNALME 441
Query: 174 MYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVV 233
MY K G + EA+ IFD + ++SW T+IGGY NEAF L +M + + P+ V
Sbjct: 442 MYVKCGNMEEAKLIFDGVVSKDMISWNTLIGGYSRNNLANEAFSLFTEM-LLQLRPNAVT 500
Query: 234 FLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVL 293
++ A + +L MH+ L+ GY +D + N L+ MY KCG L LARR+FD +
Sbjct: 501 MTCILPAAASLSSLERGREMHAYALRRGYLEDDFVANALIDMYVKCGALLLARRLFDRLS 560
Query: 294 EKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKG-K 352
K++ WT M+ GY G +A+ LF+++ + + P+ A+ + L AC+ G +G +
Sbjct: 561 NKNLISWTIMVAGYGMHGRGRDAIALFEQMRVSGIAPDAASFSAILYACSHSGLRDEGWR 620
Query: 353 EIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVP-DKDLAVWSAMINGYAIH 411
+ + +E + T ++ + G + +A E + +P + D ++W +++ G IH
Sbjct: 621 FFDAMRKEHKIEPRLKHYTCMVDLLINTGNLKEAYEFIDSMPIEPDSSIWVSLLRGCRIH 680
>gi|357133320|ref|XP_003568274.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Brachypodium distachyon]
Length = 919
Score = 368 bits (944), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 198/620 (31%), Positives = 337/620 (54%), Gaps = 6/620 (0%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+I G + L + M +G+ +S T +L AC+ + + GK++HS++LK G
Sbjct: 215 LISGHAQCGHGDRALGIFDEMQLSGLSPDSVTIASLLAACSAVGDLRKGKQLHSYLLKAG 274
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
D ++ L+D+Y K D + ++ D +VV WN ++ A+ + ++ +
Sbjct: 275 MSLDYIMEGSLLDLYVKSGDIEEALQIFDSGD--RTNVVLWNLMLVAYGQIDDLAKSFDI 332
Query: 121 LKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGLLN---NEIPLANSVMSMYAK 177
M G+ + T+ ++ C+ I + ++ L + N +++ ++ ++ MY+K
Sbjct: 333 FYRMLAAGVRPNKFTYPCMLRTCTHTGEIGLGEQIHSLTIKNGFQSDMYVSGVLIDMYSK 392
Query: 178 FGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNL 237
+G +++A+ I D I E +VSWT++I GYV EA +M+ + PD + +
Sbjct: 393 YGWLDKAQRILDMIEEKDVVSWTSMIAGYVQHEFCKEALETFKEMQACGIWPDNIGLASA 452
Query: 238 ILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSV 297
I CA + + +H+ + SGY+ + + N LV +Y +CG + A F+A+ K
Sbjct: 453 ISACAGIKAVHQGSQIHARVYVSGYSADVSIWNGLVYLYARCGISKEAFSSFEAIEHKEG 512
Query: 298 FLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEY 357
W +I G+AQ G EA+ +F ++ + + N T +++SA A L + +GK+I
Sbjct: 513 ITWNGLISGFAQSGLYEEALKVFMKMDQAGAKYNVFTFVSSISASANLADIKQGKQIHAR 572
Query: 358 IVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQA 417
++ G S ++ +LI ++ KCG I AK F + ++ W+ +I + HG G +A
Sbjct: 573 VIKTGYTSETEISNALISLYGKCGSIEDAKMDFFEMTKRNEVSWNTIITCCSQHGRGLEA 632
Query: 418 LNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLV 477
L+LF +M+ +GLKP V + +L+ACSH G+V++GL +FKSM + GI P +HY C+V
Sbjct: 633 LDLFDQMKQ-QGLKPSDVTFVGVLTACSHVGLVEEGLCYFKSMSNEHGIHPRPDHYACVV 691
Query: 478 DLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTG 537
D+LGRAG+ D A + + EMP+ + VW LLSAC H N+E+GE+AAK+LL L P +
Sbjct: 692 DILGRAGQLDRAKRFVEEMPIPADSMVWRTLLSACKVHKNLEIGEFAAKHLLELEPHDSA 751
Query: 538 NYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVD 597
+Y+L++N + G W R +M DR + KEPG S +E+ V F GDR H L+
Sbjct: 752 SYVLLSNAYAVTGKWASRDQIRKIMKDRGVRKEPGRSWIEVKNVVHAFFVGDRLHPLADQ 811
Query: 598 IRKTLKELHIKLLEAGYIAE 617
I L L+ +L + GY E
Sbjct: 812 IYNFLSHLNDRLYKIGYKQE 831
Score = 238 bits (607), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 141/515 (27%), Positives = 262/515 (50%), Gaps = 12/515 (2%)
Query: 6 TNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDA 65
NG EE + Y M ++GV + +L AC G+ +H V K GF +
Sbjct: 119 AQNGLGEEAVRLYREMHRSGVVPTPYVLSSILSACTKTELFQLGRLIHVQVYKQGFFSET 178
Query: 66 FVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMW 125
FV LI +Y +C F + +V +M V++N++IS H++ D A+ + EM
Sbjct: 179 FVGNALISLYLRCRSFRLADRVFCDM--LYCDSVTFNTLISGHAQCGHGDRALGIFDEMQ 236
Query: 126 VLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKV 181
+ GL + T S+++ CS R+G +H + K G+ + I + S++ +Y K G +
Sbjct: 237 LSGLSPDSVTIASLLAACSAVGDLRKGKQLHSYLLKAGMSLDYI-MEGSLLDLYVKSGDI 295
Query: 182 NEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGC 241
EA IFD T++V W ++ Y + ++ ++F + +M V P+ + ++ C
Sbjct: 296 EEALQIFDSGDRTNVVLWNLMLVAYGQIDDLAKSFDIFYRMLAAGVRPNKFTYPCMLRTC 355
Query: 242 AQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWT 301
G + L +HSL +K+G+ ++ + +L+ MY+K G L+ A+R+ D + EK V WT
Sbjct: 356 THTGEIGLGEQIHSLTIKNGFQSDMYVSGVLIDMYSKYGWLDKAQRILDMIEEKDVVSWT 415
Query: 302 SMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLN 361
SMI GY Q + EA+ FK + + P+ LA+ +SACA + ++ +G +I + ++
Sbjct: 416 SMIAGYVQHEFCKEALETFKEMQACGIWPDNIGLASAISACAGIKAVHQGSQIHARVYVS 475
Query: 362 GLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLF 421
G ++ + L++++++CG +A FE + K+ W+ +I+G+A G+ ++AL +F
Sbjct: 476 GYSADVSIWNGLVYLYARCGISKEAFSSFEAIEHKEGITWNGLISGFAQSGLYEEALKVF 535
Query: 422 YKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFF-KSMQSNFGIEPSIEHYLCLVDLL 480
KM G K + + S +SA ++ + G + +++ + E I + L+ L
Sbjct: 536 MKMDQA-GAKYNVFTFVSSISASANLADIKQGKQIHARVIKTGYTSETEISN--ALISLY 592
Query: 481 GRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKH 515
G+ G + A EM + W +++ C +H
Sbjct: 593 GKCGSIEDAKMDFFEMTKRNEVS-WNTIITCCSQH 626
Score = 216 bits (551), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 156/593 (26%), Positives = 279/593 (47%), Gaps = 57/593 (9%)
Query: 33 FPLVLKACANINSIWD-GKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEM 91
F L+AC W +H+ + G + LID+Y+K +R+V +E+
Sbjct: 44 FACALRACRGSGRRWPLVPEIHAKAIICGLSGYRIIGNLLIDLYAKKGFVRRARRVFEEL 103
Query: 92 PVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCS----FRQ 147
VR VSW +++S +++ L +EA+ + +EM G+ + S++S C+ F+
Sbjct: 104 SVR--DNVSWVAVLSGYAQNGLGEEAVRLYREMHRSGVVPTPYVLSSILSACTKTELFQL 161
Query: 148 GISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYV 207
G +H VYK G + E + N+++S+Y + A +F ++ V++ T+I G+
Sbjct: 162 GRLIHVQVYKQGFFS-ETFVGNALISLYLRCRSFRLADRVFCDMLYCDSVTFNTLISGHA 220
Query: 208 NVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDP 267
G+ + A G+ ++M+ ++PD V +L+ C+ VG+L +HS LLK+G + +
Sbjct: 221 QCGHGDRALGIFDEMQLSGLSPDSVTIASLLAACSAVGDLRKGKQLHSYLLKAGMSLDYI 280
Query: 268 LDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTS 327
++ L+ +Y K GD+E A ++FD+ +V LW M+ Y Q+ +++ ++F R+L
Sbjct: 281 MEGSLLDLYVKSGDIEEALQIFDSGDRTNVVLWNLMLVAYGQIDDLAKSFDIFYRMLAAG 340
Query: 328 VRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAK 387
VRPN+ T L C G + G++I + NG +S+ V LI M+SK G ++KA+
Sbjct: 341 VRPNKFTYPCMLRTCTHTGEIGLGEQIHSLTIKNGFQSDMYVSGVLIDMYSKYGWLDKAQ 400
Query: 388 EVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHS 447
+ + + +KD+ W++MI GY H +AL F +MQ G+ PD + S +SAC+
Sbjct: 401 RILDMIEEKDVVSWTSMIAGYVQHEFCKEALETFKEMQAC-GIWPDNIGLASAISACAGI 459
Query: 448 GMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAP 507
V G + + G + + LV L R G A + E + W
Sbjct: 460 KAVHQGSQIHARVYVS-GYSADVSIWNGLVYLYARCGISKEAFSSF-EAIEHKEGITWNG 517
Query: 508 LLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRL 567
L+S F +G+++EA MD
Sbjct: 518 LISG----------------------------------FAQSGLYEEALKVFMKMD---- 539
Query: 568 TKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKELHIKLLEAGYIAEADI 620
Q +V FV+ + DI++ K++H ++++ GY +E +I
Sbjct: 540 -------QAGAKYNVFTFVSSISASANLADIKQG-KQIHARVIKTGYTSETEI 584
>gi|356501823|ref|XP_003519723.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Glycine max]
Length = 727
Score = 368 bits (944), Expect = 7e-99, Method: Compositional matrix adjust.
Identities = 202/621 (32%), Positives = 352/621 (56%), Gaps = 13/621 (2%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
++R G F + + Y SMLQ GV +++T+PLVLKAC++++++ G+ VH +
Sbjct: 104 ILRGLVAVGHFTKAIHFYHSMLQHGVTPDNYTYPLVLKACSSLHALQLGRWVHE-TMHGK 162
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSII--SAHSRACLNDEAI 118
+ + +VQ +IDM++KC +R++ +EMP R + SW ++I + + CL EA+
Sbjct: 163 TKANVYVQCAVIDMFAKCGSVEDARRMFEEMPDR--DLASWTALICGTMWNGECL--EAL 218
Query: 119 LVLKEMWVLGLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSM 174
L+ ++M GL + S++ C + + G+++ C + G +++ ++N+V+ M
Sbjct: 219 LLFRKMRSEGLMPDSVIVASILPACGRLEAVKLGMALQVCAVRSGF-ESDLYVSNAVIDM 277
Query: 175 YAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVF 234
Y K G EA +F + + +VSW+T+I GY E++ L M + + + +V
Sbjct: 278 YCKCGDPLEAHRVFSHMVYSDVVSWSTLIAGYSQNCLYQESYKLYIGMINVGLATNAIVA 337
Query: 235 LNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLE 294
+++ ++ L MH+ +LK G ++ + + L+ MY CG ++ A +F+ +
Sbjct: 338 TSVLPALGKLELLKQGKEMHNFVLKEGLMSDVVVGSALIVMYANCGSIKEAESIFECTSD 397
Query: 295 KSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEI 354
K + +W SMI GY +G A F+R+ RPN T+ + L C ++G+L +GKEI
Sbjct: 398 KDIMVWNSMIVGYNLVGDFESAFFTFRRIWGAEHRPNFITVVSILPICTQMGALRQGKEI 457
Query: 355 EEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMG 414
Y+ +GL N V SLI M+SKCG + ++VF+++ +++ ++ MI+ HG G
Sbjct: 458 HGYVTKSGLGLNVSVGNSLIDMYSKCGFLELGEKVFKQMMVRNVTTYNTMISACGSHGQG 517
Query: 415 DQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYL 474
++ L FY+ EG +P+ V + S+LSACSH+G++D G + SM +++GIEP++EHY
Sbjct: 518 EKGLA-FYEQMKEEGNRPNKVTFISLLSACSHAGLLDRGWLLYNSMINDYGIEPNMEHYS 576
Query: 475 CLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPG 534
C+VDL+GRAG D A K I MP+ A V+ LL AC H+ VEL E A+ +L L
Sbjct: 577 CMVDLIGRAGDLDGAYKFITRMPMTPDANVFGSLLGACRLHNKVELTELLAERILQLKAD 636
Query: 535 STGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHL 594
+G+Y+L++NL+ S W++ + R ++ D+ L K+PG S +++ + VF A H
Sbjct: 637 DSGHYVLLSNLYASGKRWEDMSKVRSMIKDKGLEKKPGSSWIQVGHCIYVFHATSAFHPA 696
Query: 595 SVDIRKTLKELHIKLLEAGYI 615
I +TL L + + Y+
Sbjct: 697 FAKIEETLNSLLLVMKSEDYM 717
Score = 139 bits (350), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 92/353 (26%), Positives = 174/353 (49%), Gaps = 10/353 (2%)
Query: 105 ISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGLLNNE 164
++AH+ A L I ++ L + + ++F + S + + ++H + LG
Sbjct: 7 VNAHAIAML----ITFTRQQHSLPIHFTVTSFHRLKSPPNLHEARTLHALLLVLGFFQPT 62
Query: 165 IP----LANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCN 220
P A+ ++++Y FG + A F + I++W I+ G V VG+ +A +
Sbjct: 63 CPHSSSFASQLVNVYVNFGSLQHAFLTFRALPHKPIIAWNAILRGLVAVGHFTKAIHFYH 122
Query: 221 QMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCG 280
M + VTPD + ++ C+ + L L +H + N + ++ M+ KCG
Sbjct: 123 SMLQHGVTPDNYTYPLVLKACSSLHALQLGRWVHETMHGKTKANVY-VQCAVIDMFAKCG 181
Query: 281 DLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLS 340
+E ARR+F+ + ++ + WT++I G G EA+ LF+++ + P+ +A+ L
Sbjct: 182 SVEDARRMFEEMPDRDLASWTALICGTMWNGECLEALLLFRKMRSEGLMPDSVIVASILP 241
Query: 341 ACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAV 400
AC L ++ G ++ V +G ES+ V ++I M+ KCG +A VF + D+
Sbjct: 242 ACGRLEAVKLGMALQVCAVRSGFESDLYVSNAVIDMYCKCGDPLEAHRVFSHMVYSDVVS 301
Query: 401 WSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDG 453
WS +I GY+ + + ++ L+ M +V GL +A+V TS+L A ++ G
Sbjct: 302 WSTLIAGYSQNCLYQESYKLYIGMINV-GLATNAIVATSVLPALGKLELLKQG 353
>gi|449435936|ref|XP_004135750.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21300-like [Cucumis sativus]
Length = 762
Score = 367 bits (943), Expect = 7e-99, Method: Compositional matrix adjust.
Identities = 206/621 (33%), Positives = 338/621 (54%), Gaps = 8/621 (1%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
M+ NG + + M + + NS TF VL CA+ + G ++H + G
Sbjct: 130 MLNGYVKNGDSGNAIKIFLEMRHSEIKPNSVTFACVLSVCASEAMLDLGTQLHGIAVSCG 189
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+ D+ V L+ MYSKC ++RK+ D P +VSWN IIS + + L EA +
Sbjct: 190 LELDSPVANTLLAMYSKCQCLQAARKLFDTSPQS--DLVSWNGIISGYVQNGLMGEAEHL 247
Query: 121 LKEMWVLGLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
+ M G++ + TF S + S + +H + + ++ ++ L ++++ +Y
Sbjct: 248 FRGMISAGIKPDSITFASFLPCVNELLSLKHCKEIHGYIIRHAVVL-DVFLKSALIDIYF 306
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K V A+ I + V TT+I GYV G EA + + + P V F +
Sbjct: 307 KCRDVEMAQKILCQSSSFDTVVCTTMISGYVLNGKNKEALEAFRWLVQERMKPTSVTFSS 366
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
+ A + L L +H ++K+ + + + + ++ MY KCG L+LA RVF+ + EK
Sbjct: 367 IFPAFAGLAALNLGKELHGSIIKTKLDEKCHVGSAILDMYAKCGRLDLACRVFNRITEKD 426
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEE 356
W SMI +Q G P EA+NLF+++ R + +++ LSACA L +L GKEI
Sbjct: 427 AICWNSMITSCSQNGRPGEAINLFRQMGMEGTRYDCVSISGALSACANLPALHYGKEIHG 486
Query: 357 YIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQ 416
++ L S+ ++SLI M++KCG +N ++ VF+R+ +++ W+++I+ Y HG +
Sbjct: 487 LMIKGPLRSDLYAESSLIDMYAKCGNLNFSRRVFDRMQERNEVSWNSIISAYGNHGDLKE 546
Query: 417 ALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCL 476
L LF++M G++PD V + I+SAC H+G VD+G+ ++ M +GI +EHY C+
Sbjct: 547 CLALFHEMLR-NGIQPDHVTFLGIISACGHAGQVDEGIRYYHLMTEEYGIPARMEHYACV 605
Query: 477 VDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGST 536
D+ GRAGR D A +TI+ MP A VW LL AC H NVEL E A+K+L L+P ++
Sbjct: 606 ADMFGRAGRLDEAFETINSMPFPPDAGVWGTLLGACHIHGNVELAEVASKHLFDLDPLNS 665
Query: 537 GNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSV 596
G Y+L+AN+ AG W++ R +M +R + K PG+S +E++ + +FVA D SH L+
Sbjct: 666 GYYVLLANVQAGAGKWRKVLKVRSIMKERGVRKVPGYSWIEVNNATHMFVAADGSHPLTA 725
Query: 597 DIRKTLKELHIKLLEAGYIAE 617
I L L ++L + GY+ +
Sbjct: 726 QIYSVLDSLLLELKKEGYVPQ 746
Score = 230 bits (586), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 152/528 (28%), Positives = 266/528 (50%), Gaps = 20/528 (3%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MIR T G F L Y ML GV + +TFP V+KAC + S+ GK VH V +G
Sbjct: 29 MIRGFTMMGQFNYALLFYLKMLGAGVSPDKYTFPYVVKACCGLKSVKMGKIVHETVNLMG 88
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
++D FV + LI +Y++ ++ + D +P + V WN +++ + + + AI +
Sbjct: 89 LKEDVFVGSSLIKLYAENGHLSDAQYLFDNIPQ--KDSVLWNVMLNGYVKNGDSGNAIKI 146
Query: 121 LKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
EM ++ ++ TF V+S C+ G +H G L + P+AN++++MY+
Sbjct: 147 FLEMRHSEIKPNSVTFACVLSVCASEAMLDLGTQLHGIAVSCG-LELDSPVANTLLAMYS 205
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K + AR +FD ++ +VSW II GYV G + EA L M + PD + F +
Sbjct: 206 KCQCLQAARKLFDTSPQSDLVSWNGIISGYVQNGLMGEAEHLFRGMISAGIKPDSITFAS 265
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
+ ++ +L +H +++ + L + L+ +Y KC D+E+A+++
Sbjct: 266 FLPCVNELLSLKHCKEIHGYIIRHAVVLDVFLKSALIDIYFKCRDVEMAQKILCQSSSFD 325
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEE 356
+ T+MI GY G EA+ F+ L++ ++P T ++ A A L +L+ GKE+
Sbjct: 326 TVVCTTMISGYVLNGKNKEALEAFRWLVQERMKPTSVTFSSIFPAFAGLAALNLGKELHG 385
Query: 357 YIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQ 416
I+ L+ V ++++ M++KCGR++ A VF R+ +KD W++MI + +G +
Sbjct: 386 SIIKTKLDEKCHVGSAILDMYAKCGRLDLACRVFNRITEKDAICWNSMITSCSQNGRPGE 445
Query: 417 ALNLFYKMQHVEGLKPDAVVYTSILSACS-----HSGMVDDGLSFFKSMQSNFGIEPSIE 471
A+NLF +M +EG + D V + LSAC+ H G GL ++S+ E S
Sbjct: 446 AINLFRQMG-MEGTRYDCVSISGALSACANLPALHYGKEIHGLMIKGPLRSDLYAESS-- 502
Query: 472 HYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVE 519
L+D+ + G + + + M E W ++SA H +++
Sbjct: 503 ----LIDMYAKCGNLNFSRRVFDRMQ-ERNEVSWNSIISAYGNHGDLK 545
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 114/424 (26%), Positives = 213/424 (50%), Gaps = 8/424 (1%)
Query: 93 VRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGC----SFRQG 148
++L +WN +I + + A+L +M G+ TF VV C S + G
Sbjct: 18 LQLGCTSAWNWMIRGFTMMGQFNYALLFYLKMLGAGVSPDKYTFPYVVKACCGLKSVKMG 77
Query: 149 ISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVN 208
+H V +GL ++ + +S++ +YA+ G +++A+ +FD I + V W ++ GYV
Sbjct: 78 KIVHETVNLMGL-KEDVFVGSSLIKLYAENGHLSDAQYLFDNIPQKDSVLWNVMLNGYVK 136
Query: 209 VGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPL 268
G+ A + +MR + P+ V F ++ CA L L +H + + G + P+
Sbjct: 137 NGDSGNAIKIFLEMRHSEIKPNSVTFACVLSVCASEAMLDLGTQLHGIAVSCGLELDSPV 196
Query: 269 DNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSV 328
N L++MY+KC L+ AR++FD + + W +I GY Q G EA +LF+ ++ +
Sbjct: 197 ANTLLAMYSKCQCLQAARKLFDTSPQSDLVSWNGIISGYVQNGLMGEAEHLFRGMISAGI 256
Query: 329 RPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKE 388
+P+ T A+ L EL SL KEI YI+ + + + ++++LI ++ KC + A++
Sbjct: 257 KPDSITFASFLPCVNELLSLKHCKEIHGYIIRHAVVLDVFLKSALIDIYFKCRDVEMAQK 316
Query: 389 VFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSG 448
+ + D V + MI+GY ++G +AL F + E +KP +V ++SI A +
Sbjct: 317 ILCQSSSFDTVVCTTMISGYVLNGKNKEALEAFRWLVQ-ERMKPTSVTFSSIFPAFAGLA 375
Query: 449 MVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPL 508
++ G S+ ++ ++D+ + GR DLA + + + E A W +
Sbjct: 376 ALNLGKELHGSIIKT-KLDEKCHVGSAILDMYAKCGRLDLACRVFNRI-TEKDAICWNSM 433
Query: 509 LSAC 512
+++C
Sbjct: 434 ITSC 437
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 75/268 (27%), Positives = 136/268 (50%), Gaps = 1/268 (0%)
Query: 174 MYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVV 233
MY + G + +A+++F + +W +I G+ +G N A +M V+PD
Sbjct: 1 MYVRTGSLKDAKNLFYTLQLGCTSAWNWMIRGFTMMGQFNYALLFYLKMLGAGVSPDKYT 60
Query: 234 FLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVL 293
F ++ C + ++ + +H + G + + + L+ +Y + G L A+ +FD +
Sbjct: 61 FPYVVKACCGLKSVKMGKIVHETVNLMGLKEDVFVGSSLIKLYAENGHLSDAQYLFDNIP 120
Query: 294 EKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKE 353
+K LW M+ GY + G A+ +F + + ++PN T A LS CA L G +
Sbjct: 121 QKDSVLWNVMLNGYVKNGDSGNAIKIFLEMRHSEIKPNSVTFACVLSVCASEAMLDLGTQ 180
Query: 354 IEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGM 413
+ V GLE + V +L+ M+SKC + A+++F+ P DL W+ +I+GY +G+
Sbjct: 181 LHGIAVSCGLELDSPVANTLLAMYSKCQCLQAARKLFDTSPQSDLVSWNGIISGYVQNGL 240
Query: 414 GDQALNLFYKMQHVEGLKPDAVVYTSIL 441
+A +LF M G+KPD++ + S L
Sbjct: 241 MGEAEHLFRGMISA-GIKPDSITFASFL 267
>gi|147834283|emb|CAN67492.1| hypothetical protein VITISV_035978 [Vitis vinifera]
Length = 814
Score = 367 bits (943), Expect = 8e-99, Method: Compositional matrix adjust.
Identities = 193/576 (33%), Positives = 324/576 (56%), Gaps = 9/576 (1%)
Query: 51 RVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVS-SRKVLDEMPVRLRSVVSWNSIISAHS 109
++H H LK F D + T +DMY KC++ S ++ + +P ++ S+N+II ++
Sbjct: 232 QLHGHALKTDFGTDVVIGTATLDMYMKCNNLSDCSNQLFNSLPNH--NLQSYNAIIVGYA 289
Query: 110 RACLNDEAILVLKEMWVLGLELSASTFVSVVSGCSF----RQGISMHCCVYKLGLLNNEI 165
R+ EA+ + + + GL L + C+ +G+ +H K L + I
Sbjct: 290 RSDKGIEALGMFRLLQKSGLGLDEVSLSGAXRACAVIKGDLEGLQVHGLSMK-SLCQSNI 348
Query: 166 PLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRM 225
+AN+++ MY K G + EA +F+E+ VSW II + GN + L M +
Sbjct: 349 CVANAILDMYGKCGALVEACLVFEEMVSRDAVSWNAIIAAHEQNGNEEKTLSLFVWMLQS 408
Query: 226 SVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELA 285
+ PD + +++ CA L + +H+ ++KS + + L+ MY+KCG +E A
Sbjct: 409 GMEPDEFTYGSVLKACAGWQALNCGMEIHNRIIKSRMGLDSFVGIALIDMYSKCGMMEKA 468
Query: 286 RRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAEL 345
++ D + E++V W ++I G++ EA F ++L+ V P+ T AT L CA L
Sbjct: 469 EKLHDRLAEQTVVSWNAIISGFSLQKQSEEAQKTFSKMLEMGVDPDNFTYATILDTCANL 528
Query: 346 GSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMI 405
++ GK+I I+ L+S+ + ++L+ M+SKCG + + +FE+ P++D W+AM+
Sbjct: 529 VTVELGKQIHAQIIKKELQSDAYISSTLVDMYSKCGNMQDFQLIFEKAPNRDFVTWNAMV 588
Query: 406 NGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFG 465
GYA HG+G++AL +F MQ +E +KP+ + ++L AC H G+V+ GL +F SM SN+G
Sbjct: 589 CGYAQHGLGEEALKIFEYMQ-LENVKPNHATFLAVLRACGHMGLVEKGLHYFHSMLSNYG 647
Query: 466 IEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAA 525
++P +EHY C+VD++GR+G+ AL+ I MP E A +W LLS C H NVE+ E AA
Sbjct: 648 LDPQLEHYSCVVDIMGRSGQVSKALELIEGMPFEADAVIWRTLLSXCKIHGNVEVAEKAA 707
Query: 526 KNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVF 585
++L L P + Y+L++N++ +AGMW E R +M L KEPG S +EI V F
Sbjct: 708 YSILQLEPEDSAAYVLLSNIYANAGMWNEVTKLRKMMRFNGLKKEPGCSWIEIKSEVHAF 767
Query: 586 VAGDRSHHLSVDIRKTLKELHIKLLEAGYIAEADIV 621
+ GD++H S +I + L L ++ GY+ + D +
Sbjct: 768 LVGDKAHPRSKEIYENLDVLTDEMKWVGYMPDTDFI 803
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 127/460 (27%), Positives = 235/460 (51%), Gaps = 17/460 (3%)
Query: 13 ETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLI 72
E L + + ++G+ + + +ACA I +G +VH +K Q + V ++
Sbjct: 296 EALGMFRLLQKSGLGLDEVSLSGAXRACAVIKGDLEGLQVHGLSMKSLCQSNICVANAIL 355
Query: 73 DMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVL--GLE 130
DMY KC V + V +EM R VSWN+II+AH + N+E L L +W+L G+E
Sbjct: 356 DMYGKCGALVEACLVFEEMVS--RDAVSWNAIIAAHEQNG-NEEKTLSLF-VWMLQSGME 411
Query: 131 LSASTFVSVVSGCSFRQ----GISMHCCVYKLGL-LNNEIPLANSVMSMYAKFGKVNEAR 185
T+ SV+ C+ Q G+ +H + K + L++ + +A ++ MY+K G + +A
Sbjct: 412 PDEFTYGSVLKACAGWQALNCGMEIHNRIIKSRMGLDSFVGIA--LIDMYSKCGMMEKAE 469
Query: 186 SIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVG 245
+ D + E ++VSW II G+ EA ++M M V PD + ++ CA +
Sbjct: 470 KLHDRLAEQTVVSWNAIISGFSLQKQSEEAQKTFSKMLEMGVDPDNFTYATILDTCANLV 529
Query: 246 NLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIG 305
+ L +H+ ++K ++ + + LV MY+KCG+++ + +F+ + W +M+
Sbjct: 530 TVELGKQIHAQIIKKELQSDAYISSTLVDMYSKCGNMQDFQLIFEKAPNRDFVTWNAMVC 589
Query: 306 GYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLN-GLE 364
GYAQ G EA+ +F+ + +V+PN AT L AC +G + KG ++ N GL+
Sbjct: 590 GYAQHGLGEEALKIFEYMQLENVKPNHATFLAVLRACGHMGLVEKGLHYFHSMLSNYGLD 649
Query: 365 SNRQVQTSLIHMFSKCGRINKAKEVFERVP-DKDLAVWSAMINGYAIHGMGDQALNLFYK 423
+ + ++ + + G+++KA E+ E +P + D +W +++ IHG + A Y
Sbjct: 650 PQLEHYSCVVDIMGRSGQVSKALELIEGMPFEADAVIWRTLLSXCKIHGNVEVAEKAAYS 709
Query: 424 MQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSN 463
+ +E D+ Y + + +++GM ++ K M+ N
Sbjct: 710 ILQLE--PEDSAAYVLLSNIYANAGMWNEVTKLRKMMRFN 747
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 118/503 (23%), Positives = 226/503 (44%), Gaps = 80/503 (15%)
Query: 32 TFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEM 91
TF + + C++ ++ GK+ H+ ++ F+ FV LI MY KCSD + KV D M
Sbjct: 44 TFSHIFQECSDRKALCPGKQAHARMILTEFKPTVFVTNCLIQMYIKCSDLGFAFKVFDGM 103
Query: 92 PVRLRSVVSWNSIISAHSRACLNDEAI-----------------LVLKEMWVLGLELSAS 134
P R VSWN+++ + A D + L M +G +
Sbjct: 104 PQR--DTVSWNAMLFGY--AGRGDIGVAQKLFDAMPGTGCGVVELFDFRMGRMGTVFDRT 159
Query: 135 TFVSVVSGCSFRQ----GISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDE 190
TF V+ CS + GI +H K+G + ++ ++++ MYAK N+
Sbjct: 160 TFAVVLKSCSSLEDHGGGIQIHGLAVKMGF-DCDVVTGSALLDMYAKCCVQND------- 211
Query: 191 IGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLA 250
++ L +M++ A VG A
Sbjct: 212 --------------------DLRGGLELFKEMQK-----------------AGVG----A 230
Query: 251 LSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDL-ELARRVFDAVLEKSVFLWTSMIGGYAQ 309
L +H LK+ + + + + MY KC +L + + ++F+++ ++ + ++I GYA+
Sbjct: 231 LQLHGHALKTDFGTDVVIGTATLDMYMKCNNLSDCSNQLFNSLPNHNLQSYNAIIVGYAR 290
Query: 310 LGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQV 369
EA+ +F+ L K+ + +E +L+ ACA + +G ++ + + +SN V
Sbjct: 291 SDKGIEALGMFRLLQKSGLGLDEVSLSGAXRACAVIKGDLEGLQVHGLSMKSLCQSNICV 350
Query: 370 QTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEG 429
+++ M+ KCG + +A VFE + +D W+A+I + +G ++ L+LF M G
Sbjct: 351 ANAILDMYGKCGALVEACLVFEEMVSRDAVSWNAIIAAHEQNGNEEKTLSLFVWMLQ-SG 409
Query: 430 LKPDAVVYTSILSACSHSGMVDDGLSFF-KSMQSNFGIEPSIEHYLCLVDLLGRAGRFDL 488
++PD Y S+L AC+ ++ G+ + ++S G++ + + L+D+ + G +
Sbjct: 410 MEPDEFTYGSVLKACAGWQALNCGMEIHNRIIKSRMGLDSFVG--IALIDMYSKCGMMEK 467
Query: 489 ALKTIHEMPVEVQAQVWAPLLSA 511
A K +H+ E W ++S
Sbjct: 468 AEK-LHDRLAEQTVVSWNAIISG 489
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 84/310 (27%), Positives = 158/310 (50%), Gaps = 9/310 (2%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+I NG+ E+TLS + MLQ+G+ + FT+ VLKACA ++ G +H+ ++K
Sbjct: 385 IIAAHEQNGNEEKTLSLFVWMLQSGMEPDEFTYGSVLKACAGWQALNCGMEIHNRIIKSR 444
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
D+FV LIDMYSKC + K+ D + ++VVSWN+IIS S ++EA
Sbjct: 445 MGLDSFVGIALIDMYSKCGMMEKAEKLHDRLAE--QTVVSWNAIISGFSLQKQSEEAQKT 502
Query: 121 LKEMWVLGLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
+M +G++ T+ +++ C + G +H + K L ++ ++++++ MY+
Sbjct: 503 FSKMLEMGVDPDNFTYATILDTCANLVTVELGKQIHAQIIK-KELQSDAYISSTLVDMYS 561
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K G + + + IF++ V+W ++ GY G EA + M+ +V P+ FL
Sbjct: 562 KCGNMQDFQLIFEKAPNRDFVTWNAMVCGYAQHGLGEEALKIFEYMQLENVKPNHATFLA 621
Query: 237 LILGCAQVGNLFLALS-MHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAV-LE 294
++ C +G + L HS+L G + + + +V + + G + A + + + E
Sbjct: 622 VLRACGHMGLVEKGLHYFHSMLSNYGLDPQLEHYSCVVDIMGRSGQVSKALELIEGMPFE 681
Query: 295 KSVFLWTSMI 304
+W +++
Sbjct: 682 ADAVIWRTLL 691
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 117/210 (55%), Gaps = 9/210 (4%)
Query: 12 EETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGL 71
EE T+S ML+ GV ++FT+ +L CAN+ ++ GK++H+ ++K Q DA++ + L
Sbjct: 497 EEAQKTFSKMLEMGVDPDNFTYATILDTCANLVTVELGKQIHAQIIKKELQSDAYISSTL 556
Query: 72 IDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLEL 131
+DMYSKC + + + ++ P R V+WN+++ +++ L +EA+ + + M + ++
Sbjct: 557 VDMYSKCGNMQDFQLIFEKAPN--RDFVTWNAMVCGYAQHGLGEEALKIFEYMQLENVKP 614
Query: 132 SASTFVSVVSGCS----FRQGIS-MHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARS 186
+ +TF++V+ C +G+ H + G L+ ++ + V+ + + G+V++A
Sbjct: 615 NHATFLAVLRACGHMGLVEKGLHYFHSMLSNYG-LDPQLEHYSCVVDIMGRSGQVSKALE 673
Query: 187 IFDEIG-ETSIVSWTTIIGGYVNVGNVNEA 215
+ + + E V W T++ GNV A
Sbjct: 674 LIEGMPFEADAVIWRTLLSXCKIHGNVEVA 703
>gi|15232500|ref|NP_188131.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546753|sp|P0C898.1|PP232_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g15130
gi|332642102|gb|AEE75623.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 689
Score = 367 bits (943), Expect = 8e-99, Method: Compositional matrix adjust.
Identities = 207/594 (34%), Positives = 339/594 (57%), Gaps = 23/594 (3%)
Query: 36 VLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRL 95
+L+ C G +VH ++LK G + LIDMY KC + + + KV D MP R
Sbjct: 12 ILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMPER- 70
Query: 96 RSVVSWNSIISAHSRACLNDE---AILVLKEMWVLGLELSASTFVSVVSGC----SFRQG 148
+VVSW++++S H LN + ++ + EM G+ + TF + + C + +G
Sbjct: 71 -NVVSWSALMSGH---VLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKG 126
Query: 149 ISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVN 208
+ +H K+G + + NS++ MY+K G++NEA +F I + S++SW +I G+V+
Sbjct: 127 LQIHGFCLKIGF-EMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVH 185
Query: 209 VGNVNEAFGLCNQMRRMSVT--PDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYN--N 264
G ++A M+ ++ PD +L+ C+ G ++ +H L++SG++ +
Sbjct: 186 AGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPS 245
Query: 265 EDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLL 324
+ LV +Y KCG L AR+ FD + EK++ W+S+I GYAQ G EA+ LFKRL
Sbjct: 246 SATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQ 305
Query: 325 KTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVL--NGLESNRQVQTSLIHMFSKCGR 382
+ + + + L++ + A+ L +GK+++ V +GLE++ V S++ M+ KCG
Sbjct: 306 ELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETS--VLNSVVDMYLKCGL 363
Query: 383 INKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILS 442
+++A++ F + KD+ W+ +I GY HG+G +++ +FY+M ++PD V Y ++LS
Sbjct: 364 VDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLR-HNIEPDEVCYLAVLS 422
Query: 443 ACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQA 502
ACSHSGM+ +G F + GI+P +EHY C+VDLLGRAGR A I MP++
Sbjct: 423 ACSHSGMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIKPNV 482
Query: 503 QVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLM 562
+W LLS C H ++ELG+ K LL ++ + NY++M+NL+ AG W E AR L
Sbjct: 483 GIWQTLLSLCRVHGDIELGKEVGKILLRIDAKNPANYVMMSNLYGQAGYWNEQGNARELG 542
Query: 563 DDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKELHIKLLEA-GYI 615
+ + L KE G S VEI+ V F +G+ SH L+ I++TLKE +L E GY+
Sbjct: 543 NIKGLKKEAGMSWVEIEREVHFFRSGEDSHPLTPVIQETLKEAERRLREELGYV 596
Score = 185 bits (470), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 115/414 (27%), Positives = 210/414 (50%), Gaps = 11/414 (2%)
Query: 8 NGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFV 67
NG + +LS +S M + G++ N FTF LKAC +N++ G ++H LK+GF+ V
Sbjct: 85 NGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEV 144
Query: 68 QTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVL 127
L+DMYSKC + KV + RS++SWN++I+ A +A+ M
Sbjct: 145 GNSLVDMYSKCGRINEAEKVFRR--IVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEA 202
Query: 128 GLELSASTF--VSVVSGCS----FRQGISMHCCVYKLGL-LNNEIPLANSVMSMYAKFGK 180
++ F S++ CS G +H + + G + + S++ +Y K G
Sbjct: 203 NIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGY 262
Query: 181 VNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILG 240
+ AR FD+I E +++SW+++I GY G EA GL +++ ++ D ++I
Sbjct: 263 LFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGV 322
Query: 241 CAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLW 300
A L M +L +K E + N +V MY KCG ++ A + F + K V W
Sbjct: 323 FADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISW 382
Query: 301 TSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEI-EEYIV 359
T +I GY + G ++V +F +L+ ++ P+E LSAC+ G + +G+E+ + +
Sbjct: 383 TVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLE 442
Query: 360 LNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDK-DLAVWSAMINGYAIHG 412
+G++ + ++ + + GR+ +AK + + +P K ++ +W +++ +HG
Sbjct: 443 THGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIKPNVGIWQTLLSLCRVHG 496
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 83/168 (49%), Gaps = 3/168 (1%)
Query: 330 PNE-ATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKE 388
PN+ L + L C G +G ++ Y++ +G N LI M+ KC A +
Sbjct: 3 PNQRQNLVSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYK 62
Query: 389 VFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSG 448
VF+ +P++++ WSA+++G+ ++G +L+LF +M +G+ P+ +++ L AC
Sbjct: 63 VFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGR-QGIYPNEFTFSTNLKACGLLN 121
Query: 449 MVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEM 496
++ GL G E +E LVD+ + GR + A K +
Sbjct: 122 ALEKGLQ-IHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRI 168
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/208 (19%), Positives = 95/208 (45%), Gaps = 7/208 (3%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+I G F E + + + + +SF ++ A+ + GK++ + +K+
Sbjct: 284 LILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLP 343
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+ V ++DMY KC + K EM +L+ V+SW +I+ + + L +++ +
Sbjct: 344 SGLETSVLNSVVDMYLKCGLVDEAEKCFAEM--QLKDVISWTVVITGYGKHGLGKKSVRI 401
Query: 121 LKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
EM +E +++V+S CS ++G + + + + + V+ +
Sbjct: 402 FYEMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVEHYACVVDLLG 461
Query: 177 KFGKVNEARSIFDEIG-ETSIVSWTTII 203
+ G++ EA+ + D + + ++ W T++
Sbjct: 462 RAGRLKEAKHLIDTMPIKPNVGIWQTLL 489
>gi|15227619|ref|NP_180537.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75100656|sp|O82380.1|PP175_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g29760, chloroplastic; Flags: Precursor
gi|3582328|gb|AAC35225.1| hypothetical protein [Arabidopsis thaliana]
gi|330253207|gb|AEC08301.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 738
Score = 367 bits (942), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 213/613 (34%), Positives = 333/613 (54%), Gaps = 55/613 (8%)
Query: 50 KRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVS---SRKVLDEMPVRLRSVVSWNSIIS 106
K+ H H+++ G D + + L M + S F S +RKV DE+P + +WN++I
Sbjct: 47 KQTHGHMIRTGTFSDPYSASKLFAM-AALSSFASLEYARKVFDEIPKP--NSFAWNTLIR 103
Query: 107 AHSRACLNDEAILVLKEM----------WVLGLELSASTFVSVVSGCSFRQGISMHCCVY 156
A++ +I +M + + A+ VS S G S+H
Sbjct: 104 AYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVS-----SLSLGQSLHGMAV 158
Query: 157 KLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAF 216
K + +++ +ANS++ Y G ++ A +F I E +VSW ++I G+V G+ ++A
Sbjct: 159 K-SAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKAL 217
Query: 217 GLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMY 276
L +M V V + ++ CA++ NL + S + ++ N L N ++ MY
Sbjct: 218 ELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMY 277
Query: 277 TKCGDLELARRVFDAVLEKSVFLWTSMIGGYA---------------------------- 308
TKCG +E A+R+FDA+ EK WT+M+ GYA
Sbjct: 278 TKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALIS 337
Query: 309 ---QLGYPSEAVNLFKRL-LKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLE 364
Q G P+EA+ +F L L+ +++ N+ TL +TLSACA++G+L G+ I YI +G+
Sbjct: 338 AYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIR 397
Query: 365 SNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKM 424
N V ++LIHM+SKCG + K++EVF V +D+ VWSAMI G A+HG G++A+++FYKM
Sbjct: 398 MNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKM 457
Query: 425 QHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAG 484
Q +KP+ V +T++ ACSH+G+VD+ S F M+SN+GI P +HY C+VD+LGR+G
Sbjct: 458 QEA-NVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSG 516
Query: 485 RFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMAN 544
+ A+K I MP+ VW LL AC H N+ L E A LL L P + G ++L++N
Sbjct: 517 YLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRNDGAHVLLSN 576
Query: 545 LFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKE 604
++ G W+ + R M L KEPG S +EIDG + F++GD +H +S + L E
Sbjct: 577 IYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHPMSEKVYGKLHE 636
Query: 605 LHIKLLEAGYIAE 617
+ KL GY E
Sbjct: 637 VMEKLKSNGYEPE 649
Score = 192 bits (487), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 124/427 (29%), Positives = 213/427 (49%), Gaps = 39/427 (9%)
Query: 23 QTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFV 82
++ + N +TFP ++KA A ++S+ G+ +H +K D FV LI Y C D
Sbjct: 124 ESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLD 183
Query: 83 SSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSG 142
S+ KV ++ + VVSWNS+I+ + D+A+ + K+M ++ S T V V+S
Sbjct: 184 SACKVF--TTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSA 241
Query: 143 CSFRQGISM--HCCVY-KLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSW 199
C+ + + C Y + +N + LAN+++ MY K G + +A+ +FD + E V+W
Sbjct: 242 CAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTW 301
Query: 200 TTIIGGYVNVGNVNEAFGLCNQMRRMSVT--------------PD--LVVFLNLIL---- 239
TT++ GY + A + N M + + P+ L+VF L L
Sbjct: 302 TTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNM 361
Query: 240 ------------GCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARR 287
CAQVG L L +HS + K G + + L+ MY+KCGDLE +R
Sbjct: 362 KLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSRE 421
Query: 288 VFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGS 347
VF++V ++ VF+W++MIGG A G +EAV++F ++ + +V+PN T AC+ G
Sbjct: 422 VFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGL 481
Query: 348 LSKGKEIEEYIVLN-GLESNRQVQTSLIHMFSKCGRINKAKEVFERVP-DKDLAVWSAMI 405
+ + + + + N G+ + ++ + + G + KA + E +P +VW A++
Sbjct: 482 VDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALL 541
Query: 406 NGYAIHG 412
IH
Sbjct: 542 GACKIHA 548
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 99/405 (24%), Positives = 189/405 (46%), Gaps = 48/405 (11%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI GS ++ L + M V + T VL ACA I ++ G++V S++ +
Sbjct: 203 MINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENR 262
Query: 61 FQQDAFVQTGLIDMYSKC-------------------------------SDFVSSRKVLD 89
+ + ++DMY+KC D+ ++R+VL+
Sbjct: 263 VNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLN 322
Query: 90 EMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVL-GLELSASTFVSVVSGC----S 144
MP + +V+WN++ISA+ + +EA++V E+ + ++L+ T VS +S C +
Sbjct: 323 SMP--QKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGA 380
Query: 145 FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIG 204
G +H + K G+ N + ++++ MY+K G + ++R +F+ + + + W+ +IG
Sbjct: 381 LELGRWIHSYIKKHGIRMN-FHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIG 439
Query: 205 GYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSM-HSLLLKSGYN 263
G G NEA + +M+ +V P+ V F N+ C+ G + A S+ H + G
Sbjct: 440 GLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIV 499
Query: 264 NEDPLDNLLVSMYTKCGDLELARRVFDAV-LEKSVFLWTSMIGG---YAQLGYPSEAVNL 319
E+ +V + + G LE A + +A+ + S +W +++G +A L A
Sbjct: 500 PEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACT- 558
Query: 320 FKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLE 364
RLL+ R N+ + A+LG E+ +++ + GL+
Sbjct: 559 --RLLELEPR-NDGAHVLLSNIYAKLGKWENVSELRKHMRVTGLK 600
>gi|356544545|ref|XP_003540710.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Glycine max]
Length = 705
Score = 367 bits (942), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 222/662 (33%), Positives = 335/662 (50%), Gaps = 73/662 (11%)
Query: 29 NSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVL 88
+S F +L +C S D +R+H+ ++K F + F+Q L+D Y KC F +RKV
Sbjct: 18 DSSPFAKLLDSCVRSKSGIDARRIHARIIKTQFSSEIFIQNRLVDAYGKCGYFEDARKVF 77
Query: 89 DEMPVR------------------------LRSV-----VSWNSIISAHSRACLNDEAIL 119
D MP R +S+ SWN+++S ++ +EA+
Sbjct: 78 DRMPQRNTFSYNAVLSVLTKFGKLDEAFNVFKSMPEPDQCSWNAMVSGFAQHDRFEEALR 137
Query: 120 VLKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMY 175
+M L+ +F S +S C+ GI +H + K L ++ + ++++ MY
Sbjct: 138 FFVDMHSEDFVLNEYSFGSALSACAGLTDLNMGIQIHALISKSRYLL-DVYMGSALVDMY 196
Query: 176 AKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFL 235
+K G V A+ FD + +IVSW ++I Y G +A + M V PD +
Sbjct: 197 SKCGVVACAQRAFDGMAVRNIVSWNSLITCYEQNGPAGKALEVFVMMMDNGVEPDEITLA 256
Query: 236 NLILGCAQVGNLFLALSMHSLLLK-SGYNNEDPLDNLLVSMYTKCGDLELARRVFDAV-- 292
+++ CA + L +H+ ++K Y N+ L N LV MY KC + AR VFD +
Sbjct: 257 SVVSACASWSAIREGLQIHARVVKRDKYRNDLVLGNALVDMYAKCRRVNEARLVFDRMPL 316
Query: 293 -----------------------------LEKSVFLWTSMIGGYAQLGYPSEAVNLFKRL 323
+EK+V W ++I GY Q G EAV LF L
Sbjct: 317 RNVVSETSMVCGYARAASVKAARLMFSNMMEKNVVSWNALIAGYTQNGENEEAVRLFLLL 376
Query: 324 LKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGL------ESNRQVQTSLIHMF 377
+ S+ P T L+ACA L L G++ I+ +G ES+ V SLI M+
Sbjct: 377 KRESIWPTHYTFGNLLNACANLADLKLGRQAHTQILKHGFWFQSGEESDIFVGNSLIDMY 436
Query: 378 SKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVY 437
KCG + VFER+ ++D+ W+AMI GYA +G G AL +F KM V G KPD V
Sbjct: 437 MKCGMVEDGCLVFERMVERDVVSWNAMIVGYAQNGYGTNALEIFRKML-VSGQKPDHVTM 495
Query: 438 TSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMP 497
+LSACSH+G+V++G +F SM++ G+ P +H+ C+VDLLGRAG D A I MP
Sbjct: 496 IGVLSACSHAGLVEEGRRYFHSMRTELGLAPMKDHFTCMVDLLGRAGCLDEANDLIQTMP 555
Query: 498 VEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAAT 557
++ VW LL+AC H N+ELG+Y A+ L+ ++P ++G Y+L++N++ G WK+
Sbjct: 556 MQPDNVVWGSLLAACKVHGNIELGKYVAEKLMEIDPLNSGPYVLLSNMYAELGRWKDVVR 615
Query: 558 ARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKELHIKLLEAGYIAE 617
R M R + K+PG S +EI V VF+ D+ H L DI LK L ++ AGY+ E
Sbjct: 616 VRKQMRQRGVIKQPGCSWIEIQSRVHVFMVKDKRHPLKKDIHLVLKFLTEQMKWAGYVPE 675
Query: 618 AD 619
AD
Sbjct: 676 AD 677
Score = 208 bits (529), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 133/455 (29%), Positives = 225/455 (49%), Gaps = 45/455 (9%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
M+ + FEE L + M N ++F L ACA + + G ++H+ + K
Sbjct: 122 MVSGFAQHDRFEEALRFFVDMHSEDFVLNEYSFGSALSACAGLTDLNMGIQIHALISKSR 181
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+ D ++ + L+DMYSKC +++ D M V R++VSWNS+I+ + + +A+ V
Sbjct: 182 YLLDVYMGSALVDMYSKCGVVACAQRAFDGMAV--RNIVSWNSLITCYEQNGPAGKALEV 239
Query: 121 LKEMWVLGLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
M G+E T SVVS C + R+G+ +H V K N++ L N+++ MYA
Sbjct: 240 FVMMMDNGVEPDEITLASVVSACASWSAIREGLQIHARVVKRDKYRNDLVLGNALVDMYA 299
Query: 177 KFGKVNEARSIFDE------IGETS-------------------------IVSWTTIIGG 205
K +VNEAR +FD + ETS +VSW +I G
Sbjct: 300 KCRRVNEARLVFDRMPLRNVVSETSMVCGYARAASVKAARLMFSNMMEKNVVSWNALIAG 359
Query: 206 YVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGY--- 262
Y G EA L ++R S+ P F NL+ CA + +L L H+ +LK G+
Sbjct: 360 YTQNGENEEAVRLFLLLKRESIWPTHYTFGNLLNACANLADLKLGRQAHTQILKHGFWFQ 419
Query: 263 ---NNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNL 319
++ + N L+ MY KCG +E VF+ ++E+ V W +MI GYAQ GY + A+ +
Sbjct: 420 SGEESDIFVGNSLIDMYMKCGMVEDGCLVFERMVERDVVSWNAMIVGYAQNGYGTNALEI 479
Query: 320 FKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLN-GLESNRQVQTSLIHMFS 378
F+++L + +P+ T+ LSAC+ G + +G+ + GL + T ++ +
Sbjct: 480 FRKMLVSGQKPDHVTMIGVLSACSHAGLVEEGRRYFHSMRTELGLAPMKDHFTCMVDLLG 539
Query: 379 KCGRINKAKEVFERVP-DKDLAVWSAMINGYAIHG 412
+ G +++A ++ + +P D VW +++ +HG
Sbjct: 540 RAGCLDEANDLIQTMPMQPDNVVWGSLLAACKVHG 574
>gi|224092370|ref|XP_002309579.1| predicted protein [Populus trichocarpa]
gi|222855555|gb|EEE93102.1| predicted protein [Populus trichocarpa]
Length = 854
Score = 367 bits (942), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 209/677 (30%), Positives = 359/677 (53%), Gaps = 73/677 (10%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
++ N G +E L Y M+ GV + TF ++ AC + G VH +LK G
Sbjct: 104 LLENKLKEGCPQEVLECYYHMVTQGVLLDISTFHFLIHACCKNFDVKLGSEVHGRILKCG 163
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F ++ + L+ +YSKC ++ ++M R V+SWN++IS + + EA+ +
Sbjct: 164 FGRNKSLNNNLMGLYSKCGKLKEVCQLFEKMT--HRDVISWNTMISCYVLKGMYREALDL 221
Query: 121 LKEMWVLGLELSASTFVSVVSGCS----FRQGISMHC---------------CVYKL--- 158
EM V G+ T VS+VS C+ G +H C+ +
Sbjct: 222 FDEMLVSGVLPDEITMVSLVSTCAKLKDLEMGKRLHLYIVDNKLWIRGSLLNCLVDMYSK 281
Query: 159 --------GLLNN------EIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIG 204
GLL+ ++ L +++S Y K K+++AR +FD++ E S+VSWTT++
Sbjct: 282 CGKMDEAHGLLSRCDESEVDVVLWTTLVSGYVKSNKIDKARQLFDKMNERSLVSWTTMMS 341
Query: 205 GYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNN 264
GYV G E+ L QMR +V PD V + ++ C + + L S+H+ ++ G
Sbjct: 342 GYVQGGYYCESLELFQQMRFENVIPDEVALVTVLSACVHLEDFDLGRSVHAFIVTYGMLV 401
Query: 265 EDPLDNLLVSMYTKCGDLE-------------------------------LARRVFDAVL 293
+ L N L+ +Y KCG L+ AR F+ +
Sbjct: 402 DGFLGNALLDLYAKCGKLDEALRTFEQLPCKSAASWNSMLDGFCRSGGVDKARDFFNKIP 461
Query: 294 EKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKE 353
EK + W +M+ Y + +E+ +F ++ ++V+P++ TL + LS+CA++G+L+ G
Sbjct: 462 EKDIVSWNTMVNAYVKHDLFNESFEIFCKMQSSNVKPDKTTLISLLSSCAKVGALNHGIW 521
Query: 354 IEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGM 413
+ YI N + + + T+LI M+ KCG + A E+F ++ +K++ VW+AM+ YA+ G
Sbjct: 522 VNVYIEKNEIGIDAMLGTALIDMYGKCGCVEMAYEIFTQIIEKNVFVWTAMMAAYAMEGQ 581
Query: 414 GDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHY 473
+A++L+ +M+ G+KPD V + ++L+ACSH G+VD+G +F ++S + I P+I HY
Sbjct: 582 ALEAIDLYLEMEE-RGVKPDHVTFIALLAACSHGGLVDEGYKYFNKLRSFYNIIPTIHHY 640
Query: 474 LCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNP 533
C+VDLLGR G + +K I MP+E +W+ L+ AC HHNVEL E A K L+ ++P
Sbjct: 641 GCMVDLLGRVGHLEETVKFIERMPIEPDVSIWSSLMRACRSHHNVELAEQAFKQLIEIDP 700
Query: 534 GSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHH 593
+ G ++L++N++ AG W + + R + + + K+PG++ +E +G V FVA S+
Sbjct: 701 TNNGAHVLLSNIYADAGRWDDVSKVRTKLHETGVPKQPGFTMIEQNGVVHEFVA---SNL 757
Query: 594 LSVDIRKTLKELHIKLL 610
+S DI L+++ +LL
Sbjct: 758 VSADILCMLQDIERRLL 774
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 133/545 (24%), Positives = 256/545 (46%), Gaps = 79/545 (14%)
Query: 36 VLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRL 95
+LK+C+NI +H+H++ D + + ++ ++ + ++L
Sbjct: 41 LLKSCSNIREF---SPIHAHLITANLIHDPEITSQVLAFLLSVNNLDCAHQIL-SYSHEP 96
Query: 96 RSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGC----SFRQGISM 151
S++ WN+++ + E + M G+ L STF ++ C + G +
Sbjct: 97 ESII-WNTLLENKLKEGCPQEVLECYYHMVTQGVLLDISTFHFLIHACCKNFDVKLGSEV 155
Query: 152 HCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGN 211
H + K G N+ L N++M +Y+K GK+ E +F+++ ++SW T+I YV G
Sbjct: 156 HGRILKCGFGRNK-SLNNNLMGLYSKCGKLKEVCQLFEKMTHRDVISWNTMISCYVLKGM 214
Query: 212 VNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNL 271
EA L ++M V PD + ++L+ CA++ +L + +H ++ + L N
Sbjct: 215 YREALDLFDEMLVSGVLPDEITMVSLVSTCAKLKDLEMGKRLHLYIVDNKLWIRGSLLNC 274
Query: 272 LVSMYTKCGDL---------------------------------ELARRVFDAVLEKSVF 298
LV MY+KCG + + AR++FD + E+S+
Sbjct: 275 LVDMYSKCGKMDEAHGLLSRCDESEVDVVLWTTLVSGYVKSNKIDKARQLFDKMNERSLV 334
Query: 299 LWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYI 358
WT+M+ GY Q GY E++ LF+++ +V P+E L T LSAC L G+ + +I
Sbjct: 335 SWTTMMSGYVQGGYYCESLELFQQMRFENVIPDEVALVTVLSACVHLEDFDLGRSVHAFI 394
Query: 359 VLNGLESNRQVQTSLIHMFSKCGR-------------------------------INKAK 387
V G+ + + +L+ +++KCG+ ++KA+
Sbjct: 395 VTYGMLVDGFLGNALLDLYAKCGKLDEALRTFEQLPCKSAASWNSMLDGFCRSGGVDKAR 454
Query: 388 EVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHS 447
+ F ++P+KD+ W+ M+N Y H + +++ +F KMQ +KPD S+LS+C+
Sbjct: 455 DFFNKIPEKDIVSWNTMVNAYVKHDLFNESFEIFCKMQS-SNVKPDKTTLISLLSSCAKV 513
Query: 448 GMVDDGLSFFKSMQSN-FGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWA 506
G ++ G+ ++ N GI+ + L+D+ G+ G ++A + ++ +E VW
Sbjct: 514 GALNHGIWVNVYIEKNEIGIDAMLG--TALIDMYGKCGCVEMAYEIFTQI-IEKNVFVWT 570
Query: 507 PLLSA 511
+++A
Sbjct: 571 AMMAA 575
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 111/427 (25%), Positives = 197/427 (46%), Gaps = 50/427 (11%)
Query: 120 VLKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFG 179
VL+ W++ L S S + R+ +H + L+++ + + V++
Sbjct: 32 VLRPHWIIDLLKSCS---------NIREFSPIHAHLITANLIHDP-EITSQVLAFLLSVN 81
Query: 180 KVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLIL 239
++ A I E + W T++ + G E M V D+ F LI
Sbjct: 82 NLDCAHQILSYSHEPESIIWNTLLENKLKEGCPQEVLECYYHMVTQGVLLDISTFHFLIH 141
Query: 240 GCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFL 299
C + ++ L +H +LK G+ L+N L+ +Y+KCG L+ ++F+ + + V
Sbjct: 142 ACCKNFDVKLGSEVHGRILKCGFGRNKSLNNNLMGLYSKCGKLKEVCQLFEKMTHRDVIS 201
Query: 300 WTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIV 359
W +MI Y G EA++LF +L + V P+E T+ + +S CA+L L GK + YIV
Sbjct: 202 WNTMISCYVLKGMYREALDLFDEMLVSGVLPDEITMVSLVSTCAKLKDLEMGKRLHLYIV 261
Query: 360 LNGLESNRQVQTSLIHMFSKCG---------------------------------RINKA 386
N L + L+ M+SKCG +I+KA
Sbjct: 262 DNKLWIRGSLLNCLVDMYSKCGKMDEAHGLLSRCDESEVDVVLWTTLVSGYVKSNKIDKA 321
Query: 387 KEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSH 446
+++F+++ ++ L W+ M++GY G ++L LF +M+ E + PD V ++LSAC H
Sbjct: 322 RQLFDKMNERSLVSWTTMMSGYVQGGYYCESLELFQQMR-FENVIPDEVALVTVLSACVH 380
Query: 447 SGMVDDGLSFFKSMQSNFGIEPSIEHYL--CLVDLLGRAGRFDLALKTIHEMPVEVQAQV 504
D G S + + +G+ ++ +L L+DL + G+ D AL+T ++P + A
Sbjct: 381 LEDFDLGRSVHAFIVT-YGM--LVDGFLGNALLDLYAKCGKLDEALRTFEQLPCK-SAAS 436
Query: 505 WAPLLSA 511
W +L
Sbjct: 437 WNSMLDG 443
>gi|302797883|ref|XP_002980702.1| hypothetical protein SELMODRAFT_113181 [Selaginella moellendorffii]
gi|300151708|gb|EFJ18353.1| hypothetical protein SELMODRAFT_113181 [Selaginella moellendorffii]
Length = 1108
Score = 367 bits (941), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 205/621 (33%), Positives = 339/621 (54%), Gaps = 7/621 (1%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVL-KV 59
M+ S + SF + ++T+ ML G+ N +F +L AC+N ++ G+++HS +L +
Sbjct: 408 MLGASEDRKSFGKVVNTFHHMLLAGIDPNKVSFIAILNACSNSEALDFGRKIHSLILTRR 467
Query: 60 GFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAIL 119
++ V T L+ MY KC + V EMP+ RS+V+WN ++ A+++ + EA
Sbjct: 468 RDYVESSVATMLVSMYGKCGSIAEAELVFKEMPLPSRSLVTWNVMLGAYAQNDRSKEAFG 527
Query: 120 VLKEMWVLGLELSASTFVSVVSGCSFRQGIS-MHCCVYKLGLLNNEIPLANSVMSMYAKF 178
L EM G+ A +F SV+S C Q + C+ + G L +++SM+ +
Sbjct: 528 ALMEMLQGGVLPDALSFTSVLSSCYCSQEAQVLRMCILESGY--RSACLETALISMHGRC 585
Query: 179 GKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLI 238
++ +ARS+FDE+ +VSWT ++ + E L +M+ V PD +
Sbjct: 586 RELEQARSVFDEMDHGDVVSWTAMVSATAENRDFKEVHHLFRRMQLEGVIPDKFTLATTL 645
Query: 239 LGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVF 298
C L L +H+ + + G + ++N L++MY+ CGD A F+ + + +
Sbjct: 646 DTCLDSTTLGLGKIIHACVTEIGLEADIAVENALLNMYSNCGDWREALSFFETMKARDLV 705
Query: 299 LWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYI 358
W M YAQ G EAV LF+ + V+P++ T +TTL+ +S GK
Sbjct: 706 SWNIMSAAYAQAGLAKEAVLLFRHMQLEGVKPDKLTFSTTLNVSGGSALVSDGKLFHGLA 765
Query: 359 VLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQAL 418
+GL+S+ V T L+ +++KCG++++A +F + + +A+I A HG ++A+
Sbjct: 766 AESGLDSDVSVATGLVKLYAKCGKLDEAISLFRGACQWTVVLLNAIIGALAQHGFSEEAV 825
Query: 419 NLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVD 478
+F+KMQ EG++PD SI+SAC H+GMV++G S F +M+ FGI P++EHY C VD
Sbjct: 826 KMFWKMQQ-EGVRPDVATLVSIISACGHAGMVEEGCSSFLTMKEYFGISPTLEHYACFVD 884
Query: 479 LLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGN 538
LLGRAG+ + A + I +MP E VW LL C + ELGE A+ +L L+P ++
Sbjct: 885 LLGRAGQLEHAEQIIRKMPFEDNTLVWTSLLGTCKLQGDAELGERCAQRILELDPHNSAA 944
Query: 539 YILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDI 598
+++++N++ + G WK+A R + D+ + PG S +EI V FVAGDRSH + +I
Sbjct: 945 HVVLSNIYCATGKWKDADVDRKKLLDQNVKNAPGMSWLEIGKQVHEFVAGDRSHPQTDEI 1004
Query: 599 RKTLKELHIKLLEAGYIAEAD 619
L +L + + AGY EAD
Sbjct: 1005 YVVLDKLELLMRRAGY--EAD 1023
Score = 189 bits (479), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 146/516 (28%), Positives = 253/516 (49%), Gaps = 44/516 (8%)
Query: 33 FPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMP 92
+ +L++C + N + GKR H + G +Q F+ LI+MY +C + + +M
Sbjct: 28 YTALLQSCVDSNDLAKGKRAHELIANAGLEQHLFLGNCLINMYVRCGSLEEAHAIFSKME 87
Query: 93 VRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSAS----TFVSVVSGCSFRQ- 147
R+VVSW ++ISA++++ A + + M LE SA+ T V++++ C+ +
Sbjct: 88 E--RNVVSWTALISANAQSGAFARAFALFRTML---LESSAAPNSYTLVAMLNACANSRD 142
Query: 148 ---GISMHCCVYKLGLLNNEIP---LANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTT 201
G S+H +++LGL + N++++MYAK G +A ++F I E +VSWT
Sbjct: 143 LAIGRSIHAMIWELGLERESTTATLVGNAMINMYAKCGSPEDAIAVFLTIPEKDVVSWTA 202
Query: 202 IIGGYVNVGNV-NEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKS 260
+ G Y +A + +M + P+++ F+ + C + + +HSLL ++
Sbjct: 203 MAGAYAQERRFYPDALRIFREMLLQPLAPNVITFITALGACTSLRD---GTWLHSLLHEA 259
Query: 261 GYNNEDPLDNLLVSMYTKCGDLELARRVFDAVL---EKSVFLWTSMIGGYAQLGYPSEAV 317
G + N L++MY KCGD E A VF A+ E + W +MI + G +A+
Sbjct: 260 GLGFDPLAGNALINMYGKCGDWEGAYGVFKAMASRQELDLVSWNAMISASVEAGRHGDAM 319
Query: 318 NLFKRLLKTSVRPNEATLATTLSACAELG-SLSKGKEIEEYIVLNGLESNRQVQTSLIHM 376
+F+RL +RPN TL T L+A A G ++ I +G + V ++I M
Sbjct: 320 AIFRRLRLEGMRPNSVTLITILNALAASGVDFGAARKFHGRIWESGYLRDVVVGNAIISM 379
Query: 377 FSKCGRINKAKEVFERVPDK-DLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAV 435
++KCG + A VF R+ K D+ W+ M+ + +N F+ M + G+ P+ V
Sbjct: 380 YAKCGFFSAAWTVFRRIRWKCDVISWNTMLGASEDRKSFGKVVNTFHHML-LAGIDPNKV 438
Query: 436 VYTSILSACSHSGMVDDGL---SFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKT 492
+ +IL+ACS+S +D G S + + ++ +E S+ LV + G+ G A
Sbjct: 439 SFIAILNACSNSEALDFGRKIHSLILTRRRDY-VESSVATM--LVSMYGKCGSIAEAELV 495
Query: 493 IHEMPVEVQAQV-WAPLLSACMKHHNVELGEYAAKN 527
EMP+ ++ V W NV LG YA +
Sbjct: 496 FKEMPLPSRSLVTW-----------NVMLGAYAQND 520
Score = 185 bits (469), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 127/460 (27%), Positives = 229/460 (49%), Gaps = 21/460 (4%)
Query: 1 MIRNSTNNGSFEETLSTYSSML-QTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKV 59
+I + +G+F + + +ML ++ NS+T +L ACAN + G+ +H+ + ++
Sbjct: 97 LISANAQSGAFARAFALFRTMLLESSAAPNSYTLVAMLNACANSRDLAIGRSIHAMIWEL 156
Query: 60 GFQQDA----FVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRA-CLN 114
G ++++ V +I+MY+KC + V +P + VVSW ++ A+++
Sbjct: 157 GLERESTTATLVGNAMINMYAKCGSPEDAIAVFLTIPE--KDVVSWTAMAGAYAQERRFY 214
Query: 115 DEAILVLKEMWVLGLELSASTFVSVVSGC-SFRQGISMHCCVYKLGLLNNEIPLA-NSVM 172
+A+ + +EM + L + TF++ + C S R G +H +++ GL + PLA N+++
Sbjct: 215 PDALRIFREMLLQPLAPNVITFITALGACTSLRDGTWLHSLLHEAGLGFD--PLAGNALI 272
Query: 173 SMYAKFGKVNEARSIFDEIG---ETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTP 229
+MY K G A +F + E +VSW +I V G +A + ++R + P
Sbjct: 273 NMYGKCGDWEGAYGVFKAMASRQELDLVSWNAMISASVEAGRHGDAMAIFRRLRLEGMRP 332
Query: 230 DLVVFLNLILGCAQVGNLF-LALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRV 288
+ V + ++ A G F A H + +SGY + + N ++SMY KCG A V
Sbjct: 333 NSVTLITILNALAASGVDFGAARKFHGRIWESGYLRDVVVGNAIISMYAKCGFFSAAWTV 392
Query: 289 FDAVLEK-SVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGS 347
F + K V W +M+G + VN F +L + PN+ + L+AC+ +
Sbjct: 393 FRRIRWKCDVISWNTMLGASEDRKSFGKVVNTFHHMLLAGIDPNKVSFIAILNACSNSEA 452
Query: 348 LSKGKEIEEYIVLNGLES-NRQVQTSLIHMFSKCGRINKAKEVFER--VPDKDLAVWSAM 404
L G++I I+ + V T L+ M+ KCG I +A+ VF+ +P + L W+ M
Sbjct: 453 LDFGRKIHSLILTRRRDYVESSVATMLVSMYGKCGSIAEAELVFKEMPLPSRSLVTWNVM 512
Query: 405 INGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSAC 444
+ YA + +A +M G+ PDA+ +TS+LS+C
Sbjct: 513 LGAYAQNDRSKEAFGALMEMLQ-GGVLPDALSFTSVLSSC 551
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 96/340 (28%), Positives = 162/340 (47%), Gaps = 20/340 (5%)
Query: 224 RMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLE 283
R+ DL + L+ C +L H L+ +G L N L++MY +CG LE
Sbjct: 18 RVDRAADLQEYTALLQSCVDSNDLAKGKRAHELIANAGLEQHLFLGNCLINMYVRCGSLE 77
Query: 284 LARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKR-LLKTSVRPNEATLATTLSAC 342
A +F + E++V WT++I AQ G + A LF+ LL++S PN TL L+AC
Sbjct: 78 EAHAIFSKMEERNVVSWTALISANAQSGAFARAFALFRTMLLESSAAPNSYTLVAMLNAC 137
Query: 343 AELGSLSKGKEIEEYIVLNGLESNRQVQT----SLIHMFSKCGRINKAKEVFERVPDKDL 398
A L+ G+ I I GLE T ++I+M++KCG A VF +P+KD+
Sbjct: 138 ANSRDLAIGRSIHAMIWELGLERESTTATLVGNAMINMYAKCGSPEDAIAVFLTIPEKDV 197
Query: 399 AVWSAMINGYAI-HGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFF 457
W+AM YA AL +F +M ++ L P+ + + + L AC+ + DG ++
Sbjct: 198 VSWTAMAGAYAQERRFYPDALRIFREML-LQPLAPNVITFITALGACTS---LRDG-TWL 252
Query: 458 KSM--QSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPV--EVQAQVWAPLLSACM 513
S+ ++ G +P + L+++ G+ G ++ A M E+ W ++SA +
Sbjct: 253 HSLLHEAGLGFDPLAGN--ALINMYGKCGDWEGAYGVFKAMASRQELDLVSWNAMISASV 310
Query: 514 K--HHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGM 551
+ H + + L + P S I + N ++G+
Sbjct: 311 EAGRHGDAMAIFRRLRLEGMRPNSV-TLITILNALAASGV 349
>gi|255560101|ref|XP_002521068.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223539637|gb|EEF41219.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 579
Score = 367 bits (941), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 197/575 (34%), Positives = 336/575 (58%), Gaps = 8/575 (1%)
Query: 51 RVHSHVLKVG-FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHS 109
++H+ +L G F DA LI Y + ++ + +R V ++MP R S+ +WNS+I A+S
Sbjct: 3 QIHALILTTGLFFNDANSIAQLIASYGRINNIIPARNVFEKMPQR--SINAWNSMIIAYS 60
Query: 110 RACLNDEAILVLKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGL---LNNEIP 166
R DE + + M G++ +STF + CS + M ++ + ++
Sbjct: 61 RTNYPDEVLNLYYRMISEGIKPDSSTFTVTLKACSSLMDLDMGEIIWNQAVDFGYGFDVF 120
Query: 167 LANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMS 226
+ +SV+++YAK GK+++A+ +FD++ + +VSWTT+I G+ G +A + M++
Sbjct: 121 VVSSVLNLYAKSGKMDKAKIVFDKMVKRDVVSWTTMITGFAQSGRPLDAIDIYRTMQKER 180
Query: 227 VTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELAR 286
D VV + LI C +G+ LS+H +++ N ++ L L+ MY K G LELA
Sbjct: 181 TEGDGVVMVGLIQACTSLGDSKFGLSVHGHMVRREMNMDNVLQTSLIDMYAKNGKLELAS 240
Query: 287 RVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELG 346
RVF+ + KSV W ++I G+AQ G+ ++ + + + +P+ +L ++LSACA++G
Sbjct: 241 RVFEGIPYKSVISWGALISGFAQNGFANKTLASLVEMQNSGFKPDLVSLISSLSACAQVG 300
Query: 347 SLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMIN 406
+L GK + +IV L ++ T+LI M++KCG + A+ +F+++ +DL +W+AMI+
Sbjct: 301 NLKVGKSLHGHIV-KRLYLDKVSGTALIDMYAKCGALTFARALFDQIEPRDLILWNAMIS 359
Query: 407 GYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGI 466
Y IHG G +AL+LF KM+ + PD + S+LSACSHSG+V++G +F + I
Sbjct: 360 SYGIHGDGIEALSLFLKMKETN-ITPDHATFASLLSACSHSGLVEEGQYWFHVLIDKSKI 418
Query: 467 EPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAK 526
+PS +HY C+VDLL RAG+ + A + I M ++ +W LLS C+ H N+ +GE AK
Sbjct: 419 QPSEKHYACMVDLLSRAGQVEEAYQLIESMHIKPGLAIWVALLSGCLNHKNLLIGEMVAK 478
Query: 527 NLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFV 586
+L NP G Y+L++N F+ A W +AA R +M + + K PG+S VE++G +Q F+
Sbjct: 479 KILESNPDDLGIYVLVSNFFSMAKKWDDAAVFRKIMKNTGMRKVPGYSAVEVNGDLQAFL 538
Query: 587 AGDRSHHLSVDIRKTLKELHIKLLEAGYIAEADIV 621
D++H+ DI + L L ++ +E ++V
Sbjct: 539 MEDKNHNQYQDILQILDILDNEMRSIRCFSETELV 573
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 118/406 (29%), Positives = 220/406 (54%), Gaps = 18/406 (4%)
Query: 12 EETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGL 71
+E L+ Y M+ G+ +S TF + LKAC+++ + G+ + + + G+ D FV + +
Sbjct: 66 DEVLNLYYRMISEGIKPDSSTFTVTLKACSSLMDLDMGEIIWNQAVDFGYGFDVFVVSSV 125
Query: 72 IDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLEL 131
+++Y+K ++ V D+M V+ R VVSW ++I+ +++ +AI + + M E
Sbjct: 126 LNLYAKSGKMDKAKIVFDKM-VK-RDVVSWTTMITGFAQSGRPLDAIDIYRTMQKERTEG 183
Query: 132 SASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSI 187
V ++ C+ + G+S+H + + +N + L S++ MYAK GK+ A +
Sbjct: 184 DGVVMVGLIQACTSLGDSKFGLSVHGHMVRRE-MNMDNVLQTSLIDMYAKNGKLELASRV 242
Query: 188 FDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNL 247
F+ I S++SW +I G+ G N+ +M+ PDLV ++ + CAQVGNL
Sbjct: 243 FEGIPYKSVISWGALISGFAQNGFANKTLASLVEMQNSGFKPDLVSLISSLSACAQVGNL 302
Query: 248 FLALSMHSLLLKSGYNNEDPLDNL----LVSMYTKCGDLELARRVFDAVLEKSVFLWTSM 303
+ S+H ++K Y LD + L+ MY KCG L AR +FD + + + LW +M
Sbjct: 303 KVGKSLHGHIVKRLY-----LDKVSGTALIDMYAKCGALTFARALFDQIEPRDLILWNAM 357
Query: 304 IGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKE-IEEYIVLNG 362
I Y G EA++LF ++ +T++ P+ AT A+ LSAC+ G + +G+ I +
Sbjct: 358 ISSYGIHGDGIEALSLFLKMKETNITPDHATFASLLSACSHSGLVEEGQYWFHVLIDKSK 417
Query: 363 LESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKD-LAVWSAMING 407
++ + + ++ + S+ G++ +A ++ E + K LA+W A+++G
Sbjct: 418 IQPSEKHYACMVDLLSRAGQVEEAYQLIESMHIKPGLAIWVALLSG 463
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 76/312 (24%), Positives = 152/312 (48%), Gaps = 10/312 (3%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI +G + + Y +M + G+ +++AC ++ G VH H+++
Sbjct: 156 MITGFAQSGRPLDAIDIYRTMQKERTEGDGVVMVGLIQACTSLGDSKFGLSVHGHMVRRE 215
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
D +QT LIDMY+K + +V + +P +SV+SW ++IS ++ ++ +
Sbjct: 216 MNMDNVLQTSLIDMYAKNGKLELASRVFEGIP--YKSVISWGALISGFAQNGFANKTLAS 273
Query: 121 LKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
L EM G + + +S +S C+ + G S+H + K L+ +++ MYA
Sbjct: 274 LVEMQNSGFKPDLVSLISSLSACAQVGNLKVGKSLHGHIVKRLYLDK--VSGTALIDMYA 331
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K G + AR++FD+I ++ W +I Y G+ EA L +M+ ++TPD F +
Sbjct: 332 KCGALTFARALFDQIEPRDLILWNAMISSYGIHGDGIEALSLFLKMKETNITPDHATFAS 391
Query: 237 LILGCAQVGNLFLALS-MHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAV-LE 294
L+ C+ G + H L+ KS + +V + ++ G +E A ++ +++ ++
Sbjct: 392 LLSACSHSGLVEEGQYWFHVLIDKSKIQPSEKHYACMVDLLSRAGQVEEAYQLIESMHIK 451
Query: 295 KSVFLWTSMIGG 306
+ +W +++ G
Sbjct: 452 PGLAIWVALLSG 463
>gi|359486639|ref|XP_002284011.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g39620-like [Vitis vinifera]
Length = 1005
Score = 367 bits (941), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 201/626 (32%), Positives = 337/626 (53%), Gaps = 9/626 (1%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
M+ +NG F E L + M V N + A A + GK +H L+
Sbjct: 300 MMAGYAHNGCFVEVLELFDKMKLGNVRINKVSAVSAFLAAAETIDLEKGKEIHGCALQQR 359
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
D V T L+ MY+KC + ++++ ++ R +V+W++II+A + +EA+ +
Sbjct: 360 IDSDILVATPLMVMYAKCGETEKAKQLF--WGLQGRDLVAWSAIIAALVQTGYPEEALSL 417
Query: 121 LKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
+EM ++ + T +S++ C+ + G S+HC K + ++++ +++SMYA
Sbjct: 418 FQEMQNQKMKPNRVTLMSILPACADLSLLKLGKSIHCFTVKADM-DSDLSTGTALVSMYA 476
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K G A + F+ + IV+W ++I GY +G+ A + ++R ++ PD +
Sbjct: 477 KCGFFTAALTTFNRMSSRDIVTWNSLINGYAQIGDPYNAIDMFYKLRLSAINPDAGTMVG 536
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAV-LEK 295
++ CA + +L +H L++K G+ ++ + N L+ MY KCG L A +F+ K
Sbjct: 537 VVPACALLNDLDQGTCIHGLIVKLGFESDCHVKNALIDMYAKCGSLPSAEFLFNKTDFTK 596
Query: 296 SVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIE 355
W +I Y Q G+ EA++ F ++ + PN T + L A A L + +G
Sbjct: 597 DEVTWNVIIAAYMQNGHAKEAISSFHQMRLENFHPNSVTFVSVLPAAAYLAAFREGMAFH 656
Query: 356 EYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGD 415
I+ G SN V SLI M++KCG+++ ++++F + KD W+AM++GYA+HG GD
Sbjct: 657 ACIIQMGFLSNTLVGNSLIDMYAKCGQLDYSEKLFNEMDHKDTVSWNAMLSGYAVHGHGD 716
Query: 416 QALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLC 475
+A+ LF MQ + ++ D+V + S+LSAC H+G+V++G F SM + I+P +EHY C
Sbjct: 717 RAIALFSLMQESQ-VQIDSVSFVSVLSACRHAGLVEEGRKIFHSMSDKYHIKPDLEHYAC 775
Query: 476 LVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGS 535
+VDLLGRAG FD L I MPVE A VW LL +C H NV+LGE A +L+ L P +
Sbjct: 776 MVDLLGRAGLFDETLGFIKVMPVEPDAGVWGALLGSCRMHSNVKLGEVALDHLVKLEPRN 835
Query: 536 TGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLS 595
+++++++++ +G W +A AR M+D L K PG S VE+ V F GD+SH
Sbjct: 836 PAHFVVLSSIYAQSGRWADAGKARSKMNDLGLKKTPGCSWVELKNKVHAFRVGDKSHPQL 895
Query: 596 VDIRKTLKELHIKLLEAGYIAEADIV 621
+ L K+ + GY+ + V
Sbjct: 896 ESMHLLWNTLLEKMEKIGYVPDRSCV 921
Score = 258 bits (659), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 153/541 (28%), Positives = 279/541 (51%), Gaps = 13/541 (2%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MIR T + + E L Y M++ G+ + +TF VLKAC ++ +G H + + G
Sbjct: 100 MIRAYTRSKQYNEALEMYYCMVEKGLEPDKYTFTFVLKACTGALNLQEGVWFHGEIDRRG 159
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
++D F+ GL+DMYSK D +R+V D+MP R VV+WN++I+ S++ EA+
Sbjct: 160 LERDVFIGAGLVDMYSKMGDLKRAREVFDKMPKR--DVVAWNAMIAGLSQSEDPCEAVDF 217
Query: 121 LKEMWVLGLELSASTFVSVVSGCSFRQGI----SMHCCVYKLGLLNNEIPLANSVMSMYA 176
+ M ++G+E S+ + +++ G I S+H V++ + ++N ++ +Y+
Sbjct: 218 FRSMQLVGVEPSSVSLLNLFPGICKLSNIELCRSIHGYVFRRDFSS---AVSNGLIDLYS 274
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K G V+ AR +FD++ + VSW T++ GY + G E L ++M+ +V + V ++
Sbjct: 275 KCGDVDVARRVFDQMVDQDDVSWGTMMAGYAHNGCFVEVLELFDKMKLGNVRINKVSAVS 334
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
L A+ +L +H L+ +++ + L+ MY KCG+ E A+++F + +
Sbjct: 335 AFLAAAETIDLEKGKEIHGCALQQRIDSDILVATPLMVMYAKCGETEKAKQLFWGLQGRD 394
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEE 356
+ W+++I Q GYP EA++LF+ + ++PN TL + L ACA+L L GK I
Sbjct: 395 LVAWSAIIAALVQTGYPEEALSLFQEMQNQKMKPNRVTLMSILPACADLSLLKLGKSIHC 454
Query: 357 YIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQ 416
+ V ++S+ T+L+ M++KCG A F R+ +D+ W+++INGYA G
Sbjct: 455 FTVKADMDSDLSTGTALVSMYAKCGFFTAALTTFNRMSSRDIVTWNSLINGYAQIGDPYN 514
Query: 417 ALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCL 476
A+++FYK++ + + PDA ++ AC+ +D G + + G E L
Sbjct: 515 AIDMFYKLR-LSAINPDAGTMVGVVPACALLNDLDQG-TCIHGLIVKLGFESDCHVKNAL 572
Query: 477 VDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMK--HHNVELGEYAAKNLLTLNPG 534
+D+ + G A ++ W +++A M+ H + + L +P
Sbjct: 573 IDMYAKCGSLPSAEFLFNKTDFTKDEVTWNVIIAAYMQNGHAKEAISSFHQMRLENFHPN 632
Query: 535 S 535
S
Sbjct: 633 S 633
Score = 224 bits (572), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 145/483 (30%), Positives = 255/483 (52%), Gaps = 23/483 (4%)
Query: 22 LQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDF 81
L + + N +P +L +C ++N + ++H+ ++ GF+ + T LI++YS
Sbjct: 24 LSSSTYTNYLHYPRLLSSCKHLNPLL---QIHAQIIVSGFKHHHSI-THLINLYSLFHKC 79
Query: 82 VSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVS 141
+R V D P R + WNS+I A++R+ +EA+ + M GLE TF V+
Sbjct: 80 DLARSVFDSTPNPSR--ILWNSMIRAYTRSKQYNEALEMYYCMVEKGLEPDKYTFTFVLK 137
Query: 142 GCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIV 197
C+ ++G+ H + + G L ++ + ++ MY+K G + AR +FD++ + +V
Sbjct: 138 ACTGALNLQEGVWFHGEIDRRG-LERDVFIGAGLVDMYSKMGDLKRAREVFDKMPKRDVV 196
Query: 198 SWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLL 257
+W +I G + EA M+ + V P V LNL G ++ N+ L S+H +
Sbjct: 197 AWNAMIAGLSQSEDPCEAVDFFRSMQLVGVEPSSVSLLNLFPGICKLSNIELCRSIHGYV 256
Query: 258 LKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAV 317
+ +++ + N L+ +Y+KCGD+++ARRVFD ++++ W +M+ GYA G E +
Sbjct: 257 FRRDFSS--AVSNGLIDLYSKCGDVDVARRVFDQMVDQDDVSWGTMMAGYAHNGCFVEVL 314
Query: 318 NLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMF 377
LF ++ +VR N+ + + A AE L KGKEI + ++S+ V T L+ M+
Sbjct: 315 ELFDKMKLGNVRINKVSAVSAFLAAAETIDLEKGKEIHGCALQQRIDSDILVATPLMVMY 374
Query: 378 SKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVY 437
+KCG KAK++F + +DL WSA+I G ++AL+LF +MQ+ + +KP+ V
Sbjct: 375 AKCGETEKAKQLFWGLQGRDLVAWSAIIAALVQTGYPEEALSLFQEMQN-QKMKPNRVTL 433
Query: 438 TSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYL----CLVDLLGRAGRFDLALKTI 493
SIL AC+ ++ G KS+ F ++ ++ L LV + + G F AL T
Sbjct: 434 MSILPACADLSLLKLG----KSIHC-FTVKADMDSDLSTGTALVSMYAKCGFFTAALTTF 488
Query: 494 HEM 496
+ M
Sbjct: 489 NRM 491
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 138/287 (48%), Gaps = 29/287 (10%)
Query: 234 FLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNL--LVSMYTKCGDLELARRVFDA 291
+ L+ C + L L +H+ ++ SG+ + + +L L S++ KC +LAR VFD+
Sbjct: 35 YPRLLSSCKHLNPL---LQIHAQIIVSGFKHHHSITHLINLYSLFHKC---DLARSVFDS 88
Query: 292 VLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKG 351
S LW SMI Y + +EA+ ++ +++ + P++ T L AC +L +G
Sbjct: 89 TPNPSRILWNSMIRAYTRSKQYNEALEMYYCMVEKGLEPDKYTFTFVLKACTGALNLQEG 148
Query: 352 KEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIH 411
I GLE + + L+ M+SK G + +A+EVF+++P +D+ W+AMI G +
Sbjct: 149 VWFHGEIDRRGLERDVFIGAGLVDMYSKMGDLKRAREVFDKMPKRDVVAWNAMIAGLSQS 208
Query: 412 GMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVD-----DGLSF---FKSMQSN 463
+A++ F MQ V G++P +V ++ ++ G F F S SN
Sbjct: 209 EDPCEAVDFFRSMQLV-GVEPSSVSLLNLFPGICKLSNIELCRSIHGYVFRRDFSSAVSN 267
Query: 464 FGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLS 510
L+DL + G D+A + +M V+ W +++
Sbjct: 268 -----------GLIDLYSKCGDVDVARRVFDQM-VDQDDVSWGTMMA 302
>gi|15228257|ref|NP_188283.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274288|sp|Q9LUS3.1|PP237_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g16610
gi|11994615|dbj|BAB02752.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332642322|gb|AEE75843.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 654
Score = 367 bits (941), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 215/589 (36%), Positives = 330/589 (56%), Gaps = 19/589 (3%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MIR +N E+ L Y ML +GV +T+P VLKACA + +I DGK +HSHV
Sbjct: 74 MIRAYASNDFAEKALDLYYKMLNSGVRPTKYTYPFVLKACAGLRAIDDGKLIHSHVNCSD 133
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHS-RACLNDEAIL 119
F D +V T L+D Y+KC + + KV DEMP R +V+WN++IS S CL D L
Sbjct: 134 FATDMYVCTALVDFYAKCGELEMAIKVFDEMPK--RDMVAWNAMISGFSLHCCLTDVIGL 191
Query: 120 VLKEMWVLGLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMY 175
L + GL + ST V + + R+G ++H ++G +N++ + ++ +Y
Sbjct: 192 FLDMRRIDGLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMG-FSNDLVVKTGILDVY 250
Query: 176 AKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQM----RRMSVTPDL 231
AK + AR +FD + + V+W+ +IGGYV + EA + QM VTP
Sbjct: 251 AKSKCIIYARRVFDLDFKKNEVTWSAMIGGYVENEMIKEAGEVFFQMLVNDNVAMVTP-- 308
Query: 232 VVFLNLIL-GCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFD 290
V + LIL GCA+ G+L +H +K+G+ + + N ++S Y K G L A R F
Sbjct: 309 -VAIGLILMGCARFGDLSGGRCVHCYAVKAGFILDLTVQNTIISFYAKYGSLCDAFRQFS 367
Query: 291 AVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSK 350
+ K V + S+I G P E+ LF + + +RP+ TL L+AC+ L +L
Sbjct: 368 EIGLKDVISYNSLITGCVVNCRPEESFRLFHEMRTSGIRPDITTLLGVLTACSHLAALGH 427
Query: 351 GKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAI 410
G Y V++G N + +L+ M++KCG+++ AK VF+ + +D+ W+ M+ G+ I
Sbjct: 428 GSSCHGYCVVHGYAVNTSICNALMDMYTKCGKLDVAKRVFDTMHKRDIVSWNTMLFGFGI 487
Query: 411 HGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSM-QSNFGIEPS 469
HG+G +AL+LF MQ G+ PD V +ILSACSHSG+VD+G F SM + +F + P
Sbjct: 488 HGLGKEALSLFNSMQET-GVNPDEVTLLAILSACSHSGLVDEGKQLFNSMSRGDFNVIPR 546
Query: 470 IEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLL 529
I+HY C+ DLL RAG D A +++MP E +V LLSAC + N ELG +K +
Sbjct: 547 IDHYNCMTDLLARAGYLDEAYDFVNKMPFEPDIRVLGTLLSACWTYKNAELGNEVSKKMQ 606
Query: 530 TLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEI 578
+L +T + +L++N +++A W++AA R + R L K PG+S V++
Sbjct: 607 SLGE-TTESLVLLSNTYSAAERWEDAARIRMIQKKRGLLKTPGYSWVDV 654
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 116/475 (24%), Positives = 230/475 (48%), Gaps = 17/475 (3%)
Query: 33 FPLVLKACANINSIWDGKRVHSHVLKVGFQ-QDAFVQTGLIDMYSKCSDFVSSRKVLDEM 91
F +L+ C ++ G+ +H H+LK + V L +Y+ C++ +R V DE+
Sbjct: 2 FLSLLETCIRSRNLVLGQVIHQHLLKRSLTLSSSTVLVNLTRLYASCNEVELARHVFDEI 61
Query: 92 PVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCSFRQGIS- 150
P + ++W+ +I A++ ++A+ + +M G+ + T+ V+ C+ + I
Sbjct: 62 PHPRINPIAWDLMIRAYASNDFAEKALDLYYKMLNSGVRPTKYTYPFVLKACAGLRAIDD 121
Query: 151 ---MHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYV 207
+H V ++ + +++ YAK G++ A +FDE+ + +V+W +I G+
Sbjct: 122 GKLIHSHV-NCSDFATDMYVCTALVDFYAKCGELEMAIKVFDEMPKRDMVAWNAMISGFS 180
Query: 208 NVGNVNEAFGLCNQMRRMS-VTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNED 266
+ + GL MRR+ ++P+L + + + G L ++H + G++N+
Sbjct: 181 LHCCLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGFSNDL 240
Query: 267 PLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKT 326
+ ++ +Y K + ARRVFD +K+ W++MIGGY + EA +F ++L
Sbjct: 241 VVKTGILDVYAKSKCIIYARRVFDLDFKKNEVTWSAMIGGYVENEMIKEAGEVFFQMLVN 300
Query: 327 S----VRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGR 382
V P + L CA G LS G+ + Y V G + VQ ++I ++K G
Sbjct: 301 DNVAMVTP--VAIGLILMGCARFGDLSGGRCVHCYAVKAGFILDLTVQNTIISFYAKYGS 358
Query: 383 INKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILS 442
+ A F + KD+ ++++I G ++ +++ LF++M+ G++PD +L+
Sbjct: 359 LCDAFRQFSEIGLKDVISYNSLITGCVVNCRPEESFRLFHEMR-TSGIRPDITTLLGVLT 417
Query: 443 ACSHSGMVDDGLSFFK-SMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEM 496
ACSH + G S + + + SI + L+D+ + G+ D+A + M
Sbjct: 418 ACSHLAALGHGSSCHGYCVVHGYAVNTSICN--ALMDMYTKCGKLDVAKRVFDTM 470
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 69/225 (30%), Positives = 121/225 (53%), Gaps = 5/225 (2%)
Query: 233 VFLNLILGCAQVGNLFLALSMHSLLLKSGY--NNEDPLDNLLVSMYTKCGDLELARRVFD 290
+FL+L+ C + NL L +H LLK ++ L NL +Y C ++ELAR VFD
Sbjct: 1 MFLSLLETCIRSRNLVLGQVIHQHLLKRSLTLSSSTVLVNL-TRLYASCNEVELARHVFD 59
Query: 291 AVLEKSV--FLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSL 348
+ + W MI YA + +A++L+ ++L + VRP + T L ACA L ++
Sbjct: 60 EIPHPRINPIAWDLMIRAYASNDFAEKALDLYYKMLNSGVRPTKYTYPFVLKACAGLRAI 119
Query: 349 SKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGY 408
GK I ++ + ++ V T+L+ ++KCG + A +VF+ +P +D+ W+AMI+G+
Sbjct: 120 DDGKLIHSHVNCSDFATDMYVCTALVDFYAKCGELEMAIKVFDEMPKRDMVAWNAMISGF 179
Query: 409 AIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDG 453
++H + LF M+ ++GL P+ + A +G + +G
Sbjct: 180 SLHCCLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALREG 224
>gi|225456890|ref|XP_002277458.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070
[Vitis vinifera]
Length = 698
Score = 366 bits (940), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 198/590 (33%), Positives = 331/590 (56%), Gaps = 19/590 (3%)
Query: 35 LVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLID----MYSKCSDF-VSSRKVLD 89
L+L+ C I D +H+H++K V L++ + D+ VS + +D
Sbjct: 29 LILEQCKTIR---DLNEIHAHLIKTRLLLKPKVAENLLESAAILLPTSMDYAVSIFRQID 85
Query: 90 EMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCSFRQGI 149
E ++N +I + EAIL+ KEM ++ TF ++ CS Q +
Sbjct: 86 E-----PDSPAYNIMIRGFTLKQSPHEAILLFKEMHENSVQPDEFTFPCILKVCSRLQAL 140
Query: 150 S----MHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGG 205
S +H + K G ++ + N+++ MYA G+V AR +FDE+ E ++ +W ++ G
Sbjct: 141 SEGEQIHALIMKCGFGSHGF-VKNTLIHMYANCGEVEVARRVFDEMSERNVRTWNSMFAG 199
Query: 206 YVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNE 265
Y GN E L ++M + + D V ++++ C ++ +L L ++ + + G
Sbjct: 200 YTKSGNWEEVVKLFHEMLELDIRFDEVTLVSVLTACGRLADLELGEWINRYVEEKGLKGN 259
Query: 266 DPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLK 325
L LV MY KCG ++ ARR+FD + + V W++MI GY+Q EA++LF + K
Sbjct: 260 PTLITSLVDMYAKCGQVDTARRLFDQMDRRDVVAWSAMISGYSQASRCREALDLFHEMQK 319
Query: 326 TSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINK 385
++ PNE T+ + LS+CA LG+L GK + +I ++ + T+L+ ++KCG +
Sbjct: 320 ANIDPNEITMVSILSSCAVLGALETGKWVHFFIKKKRMKLTVTLGTALMDFYAKCGSVES 379
Query: 386 AKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACS 445
+ EVF ++P K++ W+ +I G A +G G +AL FY M + ++P+ V + +LSACS
Sbjct: 380 SIEVFGKMPVKNVLSWTVLIQGLASNGQGKKALEYFYLMLE-KNVEPNDVTFIGVLSACS 438
Query: 446 HSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVW 505
H+G+VD+G F SM +FGIEP IEHY C+VD+LGRAG + A + I MP++ A +W
Sbjct: 439 HAGLVDEGRDLFVSMSRDFGIEPRIEHYGCMVDILGRAGLIEEAFQFIKNMPIQPNAVIW 498
Query: 506 APLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDR 565
LL++C H NVE+GE + K L+ L P +G+YIL++N++ S G W++A RG M ++
Sbjct: 499 RTLLASCKVHKNVEIGEESLKQLIILEPTHSGDYILLSNIYASVGRWEDALKVRGEMKEK 558
Query: 566 RLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKELHIKLLEAGYI 615
+ K PG S +E+DG + F A D H S +I ++++ ++ AGY+
Sbjct: 559 GIKKTPGCSLIELDGVIHEFFAEDNVHSQSEEIYNAIEDMMKQIKSAGYV 608
Score = 208 bits (529), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 134/504 (26%), Positives = 248/504 (49%), Gaps = 51/504 (10%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MIR T S E + + M + V + FTFP +LK C+ + ++ +G+++H+ ++K G
Sbjct: 95 MIRGFTLKQSPHEAILLFKEMHENSVQPDEFTFPCILKVCSRLQALSEGEQIHALIMKCG 154
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F FV+ LI MY+ C + +R+V DEM R+V +WNS+ + ++++ +E + +
Sbjct: 155 FGSHGFVKNTLIHMYANCGEVEVARRVFDEMSE--RNVRTWNSMFAGYTKSGNWEEVVKL 212
Query: 121 LKEMWVLGLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
EM L + T VSV++ C G ++ V + GL N L S++ MYA
Sbjct: 213 FHEMLELDIRFDEVTLVSVLTACGRLADLELGEWINRYVEEKGLKGNPT-LITSLVDMYA 271
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K G+V+ AR +FD++ +V+W+ +I GY EA L ++M++ ++ P+ + ++
Sbjct: 272 KCGQVDTARRLFDQMDRRDVVAWSAMISGYSQASRCREALDLFHEMQKANIDPNEITMVS 331
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
++ CA +G L +H + K L L+ Y KCG +E + VF + K+
Sbjct: 332 ILSSCAVLGALETGKWVHFFIKKKRMKLTVTLGTALMDFYAKCGSVESSIEVFGKMPVKN 391
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEE 356
V WT +I G A G +A+ F +L+ +V PN+ T LSAC+ G + +G+++
Sbjct: 392 VLSWTVLIQGLASNGQGKKALEYFYLMLEKNVEPNDVTFIGVLSACSHAGLVDEGRDL-- 449
Query: 357 YIVLN---GLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGM 413
++ ++ G+E + ++ + + G I +A + + +P
Sbjct: 450 FVSMSRDFGIEPRIEHYGCMVDILGRAGLIEEAFQFIKNMP------------------- 490
Query: 414 GDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIE-H 472
++P+AV++ ++L++C V+ G K + +EP+
Sbjct: 491 ----------------IQPNAVIWRTLLASCKVHKNVEIGEESLKQL---IILEPTHSGD 531
Query: 473 YLCLVDLLGRAGRFDLALKTIHEM 496
Y+ L ++ GR++ ALK EM
Sbjct: 532 YILLSNIYASVGRWEDALKVRGEM 555
>gi|12957718|gb|AAK09236.1|AC084320_23 hypothetical protein [Oryza sativa Japonica Group]
gi|108711388|gb|ABF99183.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
Length = 843
Score = 366 bits (940), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 197/618 (31%), Positives = 337/618 (54%), Gaps = 8/618 (1%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
M+ GS + + M +G N T L A + ++ G ++H+ +K G
Sbjct: 218 MMDGYVKAGSVSSAVELFGDMRASGCEPNFATLACFLSVSATESDLFFGVQLHTLAVKYG 277
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+ + V L+ MY+KC K+ MP +V+WN +IS + D+A+L+
Sbjct: 278 LESEVAVANTLVSMYAKCKCLDDGWKLFGLMP--RDDLVTWNGMISGCVQNGFVDQALLL 335
Query: 121 LKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
+M G+ + T VS++ + F QG +H + + ++ ++ L ++++ +Y
Sbjct: 336 FCDMQKSGIRPDSVTLVSLLPALTDLNGFNQGKELHGYIVR-NCVHMDVFLVSALVDIYF 394
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K V A+S++D +V +T+I GYV G EA + + + P+ V +
Sbjct: 395 KCRAVRMAQSVYDSSKAIDVVIGSTMISGYVLNGMSQEAVKMFRYLLEQGIRPNAVAIAS 454
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
++ CA + + L +HS LK+ Y +++ L+ MY KCG L+L+ +F + K
Sbjct: 455 VLPACASMAAMKLGQELHSYALKNAYEGRCYVESALMDMYAKCGRLDLSHYIFSKISAKD 514
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEE 356
W SMI +AQ G P EA+NLF+ + V+ + T+++ LSACA L ++ GKEI
Sbjct: 515 EVTWNSMISSFAQNGEPEEALNLFREMCMEGVKYSNVTISSVLSACASLPAIYYGKEIHG 574
Query: 357 YIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQ 416
++ + ++ +++LI M+ KCG + A VFE +P+K+ W+++I Y +G+ +
Sbjct: 575 VVIKGPIRADLFAESALIDMYGKCGNLEWAHRVFESMPEKNEVSWNSIIASYGAYGLVKE 634
Query: 417 ALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCL 476
+++L MQ EG K D V + +++SAC+H+G V +GL F+ M + I P +EH+ C+
Sbjct: 635 SVSLLRHMQE-EGFKADHVTFLALVSACAHAGQVQEGLRLFRCMTEEYQIAPRMEHFACM 693
Query: 477 VDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGST 536
VDL RAG+ D A++ I +MP + A +W LL AC H NVEL E A++ L L+P ++
Sbjct: 694 VDLYSRAGKLDKAMELIVDMPFKPDAGIWGALLHACRVHRNVELAEIASQELFKLDPHNS 753
Query: 537 GNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSV 596
G Y+LM+N+ AG W + R LM D ++ K PG+S V+++ + +FVA D+SH S
Sbjct: 754 GYYVLMSNINAVAGRWDGVSKVRRLMKDTKVQKIPGYSWVDVNNTSHLFVAADKSHPDSE 813
Query: 597 DIRKTLKELHIKLLEAGY 614
DI +LK + ++L E G+
Sbjct: 814 DIYMSLKSILLELREEGH 831
Score = 229 bits (585), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 145/508 (28%), Positives = 261/508 (51%), Gaps = 21/508 (4%)
Query: 1 MIRNSTNNGSFEETLSTYSSML--QTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLK 58
+IR T G + L Y M + +S TFP V+K+CA + +I G+ VH
Sbjct: 115 LIRGLTMAGDYRSALLFYLKMWAHPSAPLPDSHTFPYVVKSCAALGAIALGRLVHRTART 174
Query: 59 VGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAI 118
+G D FV + LI MY+ +R+V D M R V WN ++ + +A A+
Sbjct: 175 LGLDGDMFVGSALIKMYANGGLLWDARQVFDGMAE--RDCVLWNVMMDGYVKAGSVSSAV 232
Query: 119 LVLKEMWVLGLELSASTFVSVVSGCSFRQ----GISMHCCVYKLGLLNNEIPLANSVMSM 174
+ +M G E + +T +S + G+ +H K G L +E+ +AN+++SM
Sbjct: 233 ELFGDMRASGCEPNFATLACFLSVSATESDLFFGVQLHTLAVKYG-LESEVAVANTLVSM 291
Query: 175 YAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVF 234
YAK +++ +F + +V+W +I G V G V++A L M++ + PD V
Sbjct: 292 YAKCKCLDDGWKLFGLMPRDDLVTWNGMISGCVQNGFVDQALLLFCDMQKSGIRPDSVTL 351
Query: 235 LNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLE 294
++L+ + +H ++++ + + L + LV +Y KC + +A+ V+D+
Sbjct: 352 VSLLPALTDLNGFNQGKELHGYIVRNCVHMDVFLVSALVDIYFKCRAVRMAQSVYDSSKA 411
Query: 295 KSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEI 354
V + ++MI GY G EAV +F+ LL+ +RPN +A+ L ACA + ++ G+E+
Sbjct: 412 IDVVIGSTMISGYVLNGMSQEAVKMFRYLLEQGIRPNAVAIASVLPACASMAAMKLGQEL 471
Query: 355 EEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMG 414
Y + N E V+++L+ M++KCGR++ + +F ++ KD W++MI+ +A +G
Sbjct: 472 HSYALKNAYEGRCYVESALMDMYAKCGRLDLSHYIFSKISAKDEVTWNSMISSFAQNGEP 531
Query: 415 DQALNLFYKMQHVEGLKPDAVVYTSILSACS-----HSGMVDDGLSFFKSMQSNFGIEPS 469
++ALNLF +M +EG+K V +S+LSAC+ + G G+ ++++ E +
Sbjct: 532 EEALNLFREMC-MEGVKYSNVTISSVLSACASLPAIYYGKEIHGVVIKGPIRADLFAESA 590
Query: 470 IEHYLCLVDLLGRAGRFDLALKTIHEMP 497
L+D+ G+ G + A + MP
Sbjct: 591 ------LIDMYGKCGNLEWAHRVFESMP 612
Score = 193 bits (490), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 131/462 (28%), Positives = 226/462 (48%), Gaps = 11/462 (2%)
Query: 36 VLKACANINSIWDGKRVHSHVLKVGFQ-QDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVR 94
VL+ C + + + G +VH + G D +QT L+ MY F + V +P
Sbjct: 45 VLRGCVSPSHLSLGLQVHGRAVTAGLHATDTALQTRLVGMYVLARRFRDAVAVFSSLPRG 104
Query: 95 LRS-VVSWNSIISAHSRACLNDEAILVLKEMWV-LGLELSAS-TFVSVVSGCSFRQGISM 151
+ + WN +I + A A+L +MW L S TF VV C+ I++
Sbjct: 105 AAACALPWNWLIRGLTMAGDYRSALLFYLKMWAHPSAPLPDSHTFPYVVKSCAALGAIAL 164
Query: 152 HCCVYK----LGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYV 207
V++ LGL + ++ + ++++ MYA G + +AR +FD + E V W ++ GYV
Sbjct: 165 GRLVHRTARTLGL-DGDMFVGSALIKMYANGGLLWDARQVFDGMAERDCVLWNVMMDGYV 223
Query: 208 NVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDP 267
G+V+ A L MR P+ + A +LF + +H+L +K G +E
Sbjct: 224 KAGSVSSAVELFGDMRASGCEPNFATLACFLSVSATESDLFFGVQLHTLAVKYGLESEVA 283
Query: 268 LDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTS 327
+ N LVSMY KC L+ ++F + + W MI G Q G+ +A+ LF + K+
Sbjct: 284 VANTLVSMYAKCKCLDDGWKLFGLMPRDDLVTWNGMISGCVQNGFVDQALLLFCDMQKSG 343
Query: 328 VRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAK 387
+RP+ TL + L A +L ++GKE+ YIV N + + + ++L+ ++ KC + A+
Sbjct: 344 IRPDSVTLVSLLPALTDLNGFNQGKELHGYIVRNCVHMDVFLVSALVDIYFKCRAVRMAQ 403
Query: 388 EVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHS 447
V++ D+ + S MI+GY ++GM +A+ +F + +G++P+AV S+L AC+
Sbjct: 404 SVYDSSKAIDVVIGSTMISGYVLNGMSQEAVKMFRYLLE-QGIRPNAVAIASVLPACASM 462
Query: 448 GMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLA 489
+ G N E L+D+ + GR DL+
Sbjct: 463 AAMKLGQELHSYALKN-AYEGRCYVESALMDMYAKCGRLDLS 503
>gi|224141765|ref|XP_002324235.1| predicted protein [Populus trichocarpa]
gi|222865669|gb|EEF02800.1| predicted protein [Populus trichocarpa]
Length = 736
Score = 366 bits (940), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 210/628 (33%), Positives = 334/628 (53%), Gaps = 51/628 (8%)
Query: 36 VLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRL 95
+L C + ++ K++HS ++K G F + LI+ + S + +R
Sbjct: 34 LLSNCKTLQTL---KQIHSQIIKTGLHNTHFALSKLIEFCAVSPHGDLSYALSLFKTIRN 90
Query: 96 RSVVSWNSIISAHSRACLNDEAILVLKEMWVL----GLELSASTFVSVVSGCS----FRQ 147
+ V WN +I R + E+ + E +V G E + TF S+ C+ +
Sbjct: 91 PNHVIWNHMI----RGLSSSESPFLALEYYVHMISSGTEPNEYTFPSIFKSCTKIRGAHE 146
Query: 148 GISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKV-------------------------- 181
G +H V KLGL +N + S+++MYA+ G++
Sbjct: 147 GKQVHAHVLKLGLEHNAF-VHTSLINMYAQNGELVNARLVFDKSSMRDAVSFTALITGYA 205
Query: 182 -----NEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
+EAR +FDEI +VSW +I GY G V EA +MRR VTP++ L+
Sbjct: 206 SKGFLDEARELFDEIPVRDVVSWNAMISGYAQSGRVEEAMAFFEEMRRAKVTPNVSTMLS 265
Query: 237 LILGCAQVGN-LFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEK 295
++ CAQ G+ L L + S + G + L N L+ MY KCGDLE A +F+ + +K
Sbjct: 266 VLSACAQSGSSLQLGNWVRSWIEDRGLGSNIRLVNGLIDMYVKCGDLEEASNLFEKIQDK 325
Query: 296 SVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIE 355
+V W MIGGY + EA+ LF+R++++++ PN+ T + L ACA LG+L GK +
Sbjct: 326 NVVSWNVMIGGYTHMSCYKEALGLFRRMMQSNIDPNDVTFLSILPACANLGALDLGKWVH 385
Query: 356 EYIVLN--GLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGM 413
Y+ N +++ + TSLI M++KCG + AK +F+ + K LA W+AMI+G+A+HG
Sbjct: 386 AYVDKNMKSMKNTVALWTSLIDMYAKCGDLAVAKRIFDCMNTKSLATWNAMISGFAMHGH 445
Query: 414 GDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHY 473
D AL LF +M EG PD + + +L+AC H+G++ G +F SM ++ + P + HY
Sbjct: 446 TDTALGLFSRMTS-EGFVPDDITFVGVLTACKHAGLLSLGRRYFSSMIQDYKVSPKLPHY 504
Query: 474 LCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNP 533
C++DL GRAG FD A + M ++ +W LL AC H +EL E AK+L L P
Sbjct: 505 GCMIDLFGRAGLFDEAETLVKNMEMKPDGAIWCSLLGACRIHRRIELAESVAKHLFELEP 564
Query: 534 GSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHH 593
+ Y+L++N++ AG W++ A R ++D R+ K PG S +E+D V F+ GD+ H
Sbjct: 565 ENPSAYVLLSNIYAGAGRWEDVAKIRTRLNDNRMKKVPGCSSIEVDSVVHEFLVGDKVHP 624
Query: 594 LSVDIRKTLKELHIKLLEAGYIAEADIV 621
S +I K L E+ ++L +AG++ + V
Sbjct: 625 QSNEIYKMLDEIDMRLEKAGFVPDTSEV 652
Score = 235 bits (600), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 158/524 (30%), Positives = 265/524 (50%), Gaps = 75/524 (14%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MIR +++ S L Y M+ +G N +TFP + K+C I +GK+VH+HVLK+G
Sbjct: 99 MIRGLSSSESPFLALEYYVHMISSGTEPNEYTFPSIFKSCTKIRGAHEGKQVHAHVLKLG 158
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVR-------------------------- 94
+ +AFV T LI+MY++ + V++R V D+ +R
Sbjct: 159 LEHNAFVHTSLINMYAQNGELVNARLVFDKSSMRDAVSFTALITGYASKGFLDEARELFD 218
Query: 95 ---LRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGC-----SFR 146
+R VVSWN++IS ++++ +EA+ +EM + + ST +SV+S C S +
Sbjct: 219 EIPVRDVVSWNAMISGYAQSGRVEEAMAFFEEMRRAKVTPNVSTMLSVLSACAQSGSSLQ 278
Query: 147 QGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGY 206
G + + GL +N I L N ++ MY K G + EA ++F++I + ++VSW +IGGY
Sbjct: 279 LGNWVRSWIEDRGLGSN-IRLVNGLIDMYVKCGDLEEASNLFEKIQDKNVVSWNVMIGGY 337
Query: 207 VNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKS--GYNN 264
++ EA GL +M + ++ P+ V FL+++ CA +G L L +H+ + K+ N
Sbjct: 338 THMSCYKEALGLFRRMMQSNIDPNDVTFLSILPACANLGALDLGKWVHAYVDKNMKSMKN 397
Query: 265 EDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLL 324
L L+ MY KCGDL +A+R+FD + KS+ W +MI G+A G+ A+ LF R+
Sbjct: 398 TVALWTSLIDMYAKCGDLAVAKRIFDCMNTKSLATWNAMISGFAMHGHTDTALGLFSRMT 457
Query: 325 KTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRIN 384
P++ T L+AC G LS G R+ +S+I +
Sbjct: 458 SEGFVPDDITFVGVLTACKHAGLLSLG---------------RRYFSSMIQDY------- 495
Query: 385 KAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSAC 444
+V ++P + MI+ + G+ D+A L M+ +KPD ++ S+L AC
Sbjct: 496 ---KVSPKLPH-----YGCMIDLFGRAGLFDEAETLVKNME----MKPDGAIWCSLLGAC 543
Query: 445 SHSGMVDDGLSFFKSMQSNFGIEP-SIEHYLCLVDLLGRAGRFD 487
++ S K + F +EP + Y+ L ++ AGR++
Sbjct: 544 RIHRRIELAESVAKHL---FELEPENPSAYVLLSNIYAGAGRWE 584
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 128/252 (50%), Gaps = 11/252 (4%)
Query: 235 LNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSM--YTKCGDLELARRVFDAV 292
L L+ C + L +HS ++K+G +N + L+ + GDL A +F +
Sbjct: 32 LTLLSNCKTLQTL---KQIHSQIIKTGLHNTHFALSKLIEFCAVSPHGDLSYALSLFKTI 88
Query: 293 LEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGK 352
+ +W MI G + P A+ + ++ + PNE T + +C ++ +GK
Sbjct: 89 RNPNHVIWNHMIRGLSSSESPFLALEYYVHMISSGTEPNEYTFPSIFKSCTKIRGAHEGK 148
Query: 353 EIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHG 412
++ +++ GLE N V TSLI+M+++ G + A+ VF++ +D ++A+I GYA G
Sbjct: 149 QVHAHVLKLGLEHNAFVHTSLINMYAQNGELVNARLVFDKSSMRDAVSFTALITGYASKG 208
Query: 413 MGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEH 472
D+A LF ++ D V + +++S + SG V++ ++FF+ M+ + P++
Sbjct: 209 FLDEARELFDEIP-----VRDVVSWNAMISGYAQSGRVEEAMAFFEEMRRA-KVTPNVST 262
Query: 473 YLCLVDLLGRAG 484
L ++ ++G
Sbjct: 263 MLSVLSACAQSG 274
>gi|224112156|ref|XP_002316102.1| predicted protein [Populus trichocarpa]
gi|222865142|gb|EEF02273.1| predicted protein [Populus trichocarpa]
Length = 665
Score = 366 bits (940), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 217/585 (37%), Positives = 320/585 (54%), Gaps = 13/585 (2%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+IR N F + + Y+ M ++ F VLKAC+ + +G++VH ++K G
Sbjct: 74 IIRWYFLNSEFRDIVGFYNRMRVCLKECDNVVFSHVLKACSESRNFDEGRKVHCQIVKFG 133
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
D+FV TGL+DMY+KC + SR V DE R +V SW+S+I+ + + L + +++
Sbjct: 134 -NPDSFVFTGLVDMYAKCGEIECSRSVFDENLDR--NVFSWSSMIAGYVQNNLAQDGLVL 190
Query: 121 LKEMWVLGLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
M +E + T +V C + QG +H + K G+ L +++ +YA
Sbjct: 191 FNRMREELIEANQITLGILVHACKKLGALHQGKWLHGYLIKCGIELGSY-LVTALLDLYA 249
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K G V +ARS+FDE+ IVSWT +I GY G EA L Q +++V P+ V +
Sbjct: 250 KCGVVRDARSVFDELHGIDIVSWTAMIVGYTQNGCPEEALKLFLQKEQVAVLPNDVTIAS 309
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPL-DNLLVSMYTKCGDLELARRVFDAVLEK 295
+ C+Q+ NL L S+H L +K G + DP+ N LV Y KC AR VF+ + ++
Sbjct: 310 VFSSCSQLLNLNLGRSIHGLSIKLG--SRDPIVTNSLVDFYAKCQMNRDARYVFETISDR 367
Query: 296 SVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIE 355
V W S+I ++Q G EA+ LF ++ SV P+ TL + LSACA L +L G
Sbjct: 368 DVVAWNSIISAFSQNGSAYEALELFHQMRMGSVLPDAVTLVSVLSACASLNALQVGSSFH 427
Query: 356 EYIVLNGL-ESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMG 414
Y V GL SN V T+L+ ++KCG A+ +F+ + K WSAMI+GY I G G
Sbjct: 428 AYAVKRGLLSSNVYVGTALLTFYAKCGDAESARVIFDGMDQKSTVTWSAMISGYGIQGNG 487
Query: 415 DQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYL 474
+L++F M E LKP+ ++TSILSACSH+GM+ +G F + ++ + PS +HY
Sbjct: 488 RGSLSIFGDMLKAE-LKPNEEIFTSILSACSHTGMIGEGWRLFTMICQDYNLVPSTKHYT 546
Query: 475 CLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPG 534
C+VDLL RAGR AL I +MPV+ ++ L C H +LGE A K +L L+PG
Sbjct: 547 CMVDLLARAGRLKEALDFIQKMPVQPDVSLFGAFLHGCGLHSRFDLGELAIKRMLELHPG 606
Query: 535 STGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEID 579
Y+LM NL+ S W + R LM R L K PG S +E+D
Sbjct: 607 DACYYVLMCNLYASDARWSKVKQVRELMKQRGLMKTPGCSLMEMD 651
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 95/286 (33%), Positives = 159/286 (55%), Gaps = 2/286 (0%)
Query: 161 LNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCN 220
L ++ + ++S+Y FG+++ AR +FD I +SW II Y + G N
Sbjct: 33 LTRDLSCSTKLVSLYGSFGRLDLARLVFDTIPHPDFLSWKVIIRWYFLNSEFRDIVGFYN 92
Query: 221 QMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCG 280
+MR D VVF +++ C++ N +H ++K G N + + LV MY KCG
Sbjct: 93 RMRVCLKECDNVVFSHVLKACSESRNFDEGRKVHCQIVKFG-NPDSFVFTGLVDMYAKCG 151
Query: 281 DLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLS 340
++E +R VFD L+++VF W+SMI GY Q + + LF R+ + + N+ TL +
Sbjct: 152 EIECSRSVFDENLDRNVFSWSSMIAGYVQNNLAQDGLVLFNRMREELIEANQITLGILVH 211
Query: 341 ACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAV 400
AC +LG+L +GK + Y++ G+E + T+L+ +++KCG + A+ VF+ + D+
Sbjct: 212 ACKKLGALHQGKWLHGYLIKCGIELGSYLVTALLDLYAKCGVVRDARSVFDELHGIDIVS 271
Query: 401 WSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSH 446
W+AMI GY +G ++AL LF + + V L P+ V S+ S+CS
Sbjct: 272 WTAMIVGYTQNGCPEEALKLFLQKEQVAVL-PNDVTIASVFSSCSQ 316
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 108/239 (45%), Gaps = 3/239 (1%)
Query: 246 NLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIG 305
N+ + MH+ L+ G + LVS+Y G L+LAR VFD + W +I
Sbjct: 17 NINTLMEMHAYLVVQGLTRDLSCSTKLVSLYGSFGRLDLARLVFDTIPHPDFLSWKVIIR 76
Query: 306 GYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLES 365
Y + V + R+ + + L AC+E + +G+++ IV G
Sbjct: 77 WYFLNSEFRDIVGFYNRMRVCLKECDNVVFSHVLKACSESRNFDEGRKVHCQIVKFG-NP 135
Query: 366 NRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQ 425
+ V T L+ M++KCG I ++ VF+ D+++ WS+MI GY + + L LF +M+
Sbjct: 136 DSFVFTGLVDMYAKCGEIECSRSVFDENLDRNVFSWSSMIAGYVQNNLAQDGLVLFNRMR 195
Query: 426 HVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAG 484
E ++ + + ++ AC G + G + GIE L+DL + G
Sbjct: 196 E-ELIEANQITLGILVHACKKLGALHQG-KWLHGYLIKCGIELGSYLVTALLDLYAKCG 252
>gi|15227623|ref|NP_178437.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75216181|sp|Q9ZQ74.1|PP146_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g03380, mitochondrial; Flags: Precursor
gi|4335760|gb|AAD17437.1| unknown protein [Arabidopsis thaliana]
gi|330250600|gb|AEC05694.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 689
Score = 366 bits (939), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 209/583 (35%), Positives = 321/583 (55%), Gaps = 12/583 (2%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
M+R N E + Y +++ G + F LKAC + + +GK++H ++KV
Sbjct: 113 MLRCYCLNKESVEVVKLYDLLMKHGFRYDDIVFSKALKACTELQDLDNGKKIHCQLVKVP 172
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
D V TGL+DMY+KC + S+ KV ++ + LR+VV W S+I+ + + L +E +++
Sbjct: 173 -SFDNVVLTGLLDMYAKCGEIKSAHKVFND--ITLRNVVCWTSMIAGYVKNDLCEEGLVL 229
Query: 121 LKEMW---VLGLELSASTFVSVVSGCS-FRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
M VLG E + T + + S QG H C+ K G+ + L S++ MY
Sbjct: 230 FNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSC-LVTSLLDMYV 288
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K G ++ AR +F+E +V WT +I GY + G+VNEA L +M+ + + P+ V +
Sbjct: 289 KCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTIAS 348
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
++ GC + NL L S+H L +K G + + + N LV MY KC A+ VF+ EK
Sbjct: 349 VLSGCGLIENLELGRSVHGLSIKVGIWDTN-VANALVHMYAKCYQNRDAKYVFEMESEKD 407
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEE 356
+ W S+I G++Q G EA+ LF R+ SV PN T+A+ SACA LGSL+ G +
Sbjct: 408 IVAWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLGSLAVGSSLHA 467
Query: 357 YIVLNGL--ESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMG 414
Y V G S+ V T+L+ ++KCG A+ +F+ + +K+ WSAMI GY G
Sbjct: 468 YSVKLGFLASSSVHVGTALLDFYAKCGDPQSARLIFDTIEEKNTITWSAMIGGYGKQGDT 527
Query: 415 DQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYL 474
+L LF +M + KP+ +TSILSAC H+GMV++G +F SM ++ PS +HY
Sbjct: 528 IGSLELFEEMLKKQQ-KPNESTFTSILSACGHTGMVNEGKKYFSSMYKDYNFTPSTKHYT 586
Query: 475 CLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPG 534
C+VD+L RAG + AL I +MP++ + + L C H +LGE K +L L+P
Sbjct: 587 CMVDMLARAGELEQALDIIEKMPIQPDVRCFGAFLHGCGMHSRFDLGEIVIKKMLDLHPD 646
Query: 535 STGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVE 577
Y+L++NL+ S G W +A R LM R L+K G S +E
Sbjct: 647 DASYYVLVSNLYASDGRWNQAKEVRNLMKQRGLSKIAGHSTME 689
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 97/284 (34%), Positives = 154/284 (54%), Gaps = 2/284 (0%)
Query: 161 LNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCN 220
L +I +A ++S+Y FG +AR +FD+I E W ++ Y E L +
Sbjct: 72 LMGDISIATKLVSLYGFFGYTKDARLVFDQIPEPDFYLWKVMLRCYCLNKESVEVVKLYD 131
Query: 221 QMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCG 280
+ + D +VF + C ++ +L +H L+K + L LL MY KCG
Sbjct: 132 LLMKHGFRYDDIVFSKALKACTELQDLDNGKKIHCQLVKVPSFDNVVLTGLL-DMYAKCG 190
Query: 281 DLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLS 340
+++ A +VF+ + ++V WTSMI GY + E + LF R+ + +V NE T T +
Sbjct: 191 EIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCEEGLVLFNRMRENNVLGNEYTYGTLIM 250
Query: 341 ACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAV 400
AC +L +L +GK +V +G+E + + TSL+ M+ KCG I+ A+ VF DL +
Sbjct: 251 ACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVM 310
Query: 401 WSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSAC 444
W+AMI GY +G ++AL+LF KM+ VE +KP+ V S+LS C
Sbjct: 311 WTAMIVGYTHNGSVNEALSLFQKMKGVE-IKPNCVTIASVLSGC 353
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 71/256 (27%), Positives = 119/256 (46%), Gaps = 4/256 (1%)
Query: 254 HSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYP 313
H +L +G + + LVS+Y G + AR VFD + E +LW M+ Y
Sbjct: 64 HGVLTGNGLMGDISIATKLVSLYGFFGYTKDARLVFDQIPEPDFYLWKVMLRCYCLNKES 123
Query: 314 SEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSL 373
E V L+ L+K R ++ + L AC EL L GK+I +V + V T L
Sbjct: 124 VEVVKLYDLLMKHGFRYDDIVFSKALKACTELQDLDNGKKIHCQLV-KVPSFDNVVLTGL 182
Query: 374 IHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPD 433
+ M++KCG I A +VF + +++ W++MI GY + + ++ L LF +M+ L +
Sbjct: 183 LDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCEEGLVLFNRMRENNVLG-N 241
Query: 434 AVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTI 493
Y +++ AC+ + G +F GIE S L+D+ + G A +
Sbjct: 242 EYTYGTLIMACTKLSALHQG-KWFHGCLVKSGIELSSCLVTSLLDMYVKCGDISNARRVF 300
Query: 494 HEMPVEVQAQVWAPLL 509
+E V +W ++
Sbjct: 301 NEHS-HVDLVMWTAMI 315
>gi|297822703|ref|XP_002879234.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297325073|gb|EFH55493.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 740
Score = 366 bits (939), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 212/614 (34%), Positives = 334/614 (54%), Gaps = 56/614 (9%)
Query: 50 KRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVS---SRKVLDEMPVRLRSVVSWNSIIS 106
K+ H+H+++ G D + + L + + S F S +RKV DE+P + +WN++I
Sbjct: 48 KQTHAHMIRTGMFSDPYSASKLFAI-AALSSFASLEYARKVFDEIP--QPNSFTWNTLIR 104
Query: 107 AHSRACLNDEAILVLKEM-----------WVLGLELSASTFVSVVSGCSFRQGISMHCCV 155
A++ +I +M + + A+ VS S G S+H
Sbjct: 105 AYASGPDPVCSIWAFLDMVSSESQCYPNKYTFPFLIKAAAEVS-----SLSLGQSLHGMA 159
Query: 156 YKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEA 215
K + +++ +ANS++ Y G ++ A +F I E +VSW ++I G+V G+ ++A
Sbjct: 160 IK-SAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKA 218
Query: 216 FGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSM 275
L +M V V + ++ CA++ +L + S + ++ N L N ++ M
Sbjct: 219 LELFKKMESEDVKASHVTMVGVLSACAKIRDLEFGRRVCSYIEENRVNVNLTLANAMLDM 278
Query: 276 YTKCGDLELARRVFDAVLEKSVFLWTSMIGGYA--------------------------- 308
YTKCG +E A+R+FDA+ EK WT+M+ GYA
Sbjct: 279 YTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNAMPKKDIVAWNALI 338
Query: 309 ----QLGYPSEAVNLFKRL-LKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGL 363
Q G P+EA+ +F L L+ +++ N+ TL +TLSACA++G+L G+ I YI NG+
Sbjct: 339 SAYEQNGKPNEALLVFHELQLQKNIKLNQITLVSTLSACAQVGALELGRWIHSYIKKNGI 398
Query: 364 ESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYK 423
+ N V ++LIHM+SKCG + KA+EVF V +D+ VWSAMI G A+HG G +A+++FYK
Sbjct: 399 KMNFYVTSALIHMYSKCGDLEKAREVFNSVEKRDVFVWSAMIGGLAMHGCGSEAVDMFYK 458
Query: 424 MQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRA 483
MQ +KP+ V +T++ ACSH+G+VD+ S F M+S++GI P +HY C+VD+LGR+
Sbjct: 459 MQEA-NVKPNGVTFTNVFCACSHTGLVDEAESLFYKMESSYGIVPEDKHYACIVDVLGRS 517
Query: 484 GRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMA 543
G + A+K I MP+ VW LL AC H N+ L E A LL L P + G ++L++
Sbjct: 518 GYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLSLAEMACTRLLELEPRNDGAHVLLS 577
Query: 544 NLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLK 603
N++ +G W + R M L KEPG S +EIDG + F++GD +H +S + L
Sbjct: 578 NIYAKSGKWDNVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHPMSEKVYGKLH 637
Query: 604 ELHIKLLEAGYIAE 617
E+ KL GY E
Sbjct: 638 EVMEKLKSNGYEPE 651
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 124/427 (29%), Positives = 213/427 (49%), Gaps = 39/427 (9%)
Query: 23 QTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFV 82
++ + N +TFP ++KA A ++S+ G+ +H +K D FV LI Y C D
Sbjct: 126 ESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAIKSAVGSDVFVANSLIHCYFSCGDLD 185
Query: 83 SSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSG 142
S+ KV ++ + VVSWNS+I+ + D+A+ + K+M ++ S T V V+S
Sbjct: 186 SACKVF--TTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSA 243
Query: 143 CSFRQGISMH---CCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSW 199
C+ + + C + +N + LAN+++ MY K G + +A+ +FD + E V+W
Sbjct: 244 CAKIRDLEFGRRVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTW 303
Query: 200 TTIIGGYVNVGNVNEAFGLCNQMRRMSVT--------------PD--LVVFLNLIL---- 239
TT++ GY + A + N M + + P+ L+VF L L
Sbjct: 304 TTMLDGYAISEDYEAAREVLNAMPKKDIVAWNALISAYEQNGKPNEALLVFHELQLQKNI 363
Query: 240 ------------GCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARR 287
CAQVG L L +HS + K+G + + L+ MY+KCGDLE AR
Sbjct: 364 KLNQITLVSTLSACAQVGALELGRWIHSYIKKNGIKMNFYVTSALIHMYSKCGDLEKARE 423
Query: 288 VFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGS 347
VF++V ++ VF+W++MIGG A G SEAV++F ++ + +V+PN T AC+ G
Sbjct: 424 VFNSVEKRDVFVWSAMIGGLAMHGCGSEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGL 483
Query: 348 LSKGKEIEEYIVLN-GLESNRQVQTSLIHMFSKCGRINKAKEVFERVP-DKDLAVWSAMI 405
+ + + + + + G+ + ++ + + G + KA + E +P +VW A++
Sbjct: 484 VDEAESLFYKMESSYGIVPEDKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALL 543
Query: 406 NGYAIHG 412
IH
Sbjct: 544 GACKIHA 550
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 100/402 (24%), Positives = 185/402 (46%), Gaps = 42/402 (10%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI GS ++ L + M V + T VL ACA I + G+RV S++ +
Sbjct: 205 MINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRDLEFGRRVCSYIEENR 264
Query: 61 FQQDAFVQTGLIDMYSKC-------------------------------SDFVSSRKVLD 89
+ + ++DMY+KC D+ ++R+VL+
Sbjct: 265 VNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLN 324
Query: 90 EMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVL-GLELSASTFVSVVSGC----S 144
MP + +V+WN++ISA+ + +EA+LV E+ + ++L+ T VS +S C +
Sbjct: 325 AMPK--KDIVAWNALISAYEQNGKPNEALLVFHELQLQKNIKLNQITLVSTLSACAQVGA 382
Query: 145 FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIG 204
G +H + K G+ N + ++++ MY+K G + +AR +F+ + + + W+ +IG
Sbjct: 383 LELGRWIHSYIKKNGIKMN-FYVTSALIHMYSKCGDLEKAREVFNSVEKRDVFVWSAMIG 441
Query: 205 GYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKS-GYN 263
G G +EA + +M+ +V P+ V F N+ C+ G + A S+ + S G
Sbjct: 442 GLAMHGCGSEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFYKMESSYGIV 501
Query: 264 NEDPLDNLLVSMYTKCGDLELARRVFDAV-LEKSVFLWTSMIGGYAQLGYPSEAVNLFKR 322
ED +V + + G LE A + +A+ + S +W +++G S A R
Sbjct: 502 PEDKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLSLAEMACTR 561
Query: 323 LLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLE 364
LL+ R N+ + A+ G E+ +++ + GL+
Sbjct: 562 LLELEPR-NDGAHVLLSNIYAKSGKWDNVSELRKHMRVTGLK 602
>gi|347954514|gb|AEP33757.1| organelle transcript processing 82, partial [Aethionema
cordifolium]
Length = 679
Score = 366 bits (939), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 196/560 (35%), Positives = 317/560 (56%), Gaps = 39/560 (6%)
Query: 99 VSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCC 154
+SWN++I H+ + A+ + M LGL ++ TF + C+ ++G +H
Sbjct: 44 LSWNTMIRGHALSSDPISALNLYVYMISLGLSPNSYTFPFLFKSCAKSKAAQEGKQIHAQ 103
Query: 155 VYKLGLLNNEIPLANSVMSMYAKFGKV-------------------------------NE 183
+ K GL ++ + S++SMYA+ G V ++
Sbjct: 104 ILKYGL-TVDLHVHTSLISMYAQNGIVEDAHKVFDTSSHRDVVSYTAMITGYASRGNMDK 162
Query: 184 ARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQ 243
A+ +FDEI +VSW +I GY +G EA L N+M +M V PD ++ C
Sbjct: 163 AQKMFDEIPIKDVVSWNAMISGYAEIGRYKEALELFNEMMKMDVKPDESTMATVLSTCTH 222
Query: 244 VGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSM 303
GN+ L +HS + G+ + L N L+ +Y+KCG++E A +F+ + K V W ++
Sbjct: 223 SGNVELGRQIHSWIDNHGFGSNLKLVNALIDLYSKCGEMERAHGLFEGLQYKDVISWNTL 282
Query: 304 IGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYI--VLN 361
IGGYA + + EA+ +F+ +LK PN+ T+ + L ACA LG++ G+ I YI L
Sbjct: 283 IGGYAYINHHKEALLVFQEMLKLGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKKLK 342
Query: 362 GLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLF 421
G+ +N +QTSLI M++KCG I A +VF+ + +K L+ +AMI G+A+HG D A +L
Sbjct: 343 GIITNTSLQTSLIDMYAKCGNIEAANQVFDTILNKSLSSCNAMIFGFAMHGRADAAFDLL 402
Query: 422 YKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLG 481
+M+ +G++PD + + +LSACSH+G+ D G FKSM ++ IEP +EHY C++DLLG
Sbjct: 403 SRMKK-DGIEPDDITFVGLLSACSHAGLSDLGRKIFKSMTLDYRIEPKLEHYGCMIDLLG 461
Query: 482 RAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYIL 541
R+G F A + I+ M +E +W LL AC H N+ELGE A+ L+ + P + G+Y+L
Sbjct: 462 RSGLFKEAEELINSMTMEPDGVIWGSLLKACKIHKNLELGELIAQKLMKIEPKNPGSYVL 521
Query: 542 MANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKT 601
++N++ ++ W + A R L++D+ L K PG S +EID V F+ GD+ H + +I K
Sbjct: 522 LSNIYATSARWDDVARVRTLLNDKGLKKVPGCSSIEIDSMVHEFLIGDKFHPQNKEIYKM 581
Query: 602 LKELHIKLLEAGYIAEADIV 621
L+E+ L E G++++ V
Sbjct: 582 LEEIDSLLAETGFVSDTSEV 601
Score = 201 bits (510), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 133/484 (27%), Positives = 235/484 (48%), Gaps = 42/484 (8%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MIR + L+ Y M+ G+ NS+TFP + K+CA + +GK++H+ +LK G
Sbjct: 49 MIRGHALSSDPISALNLYVYMISLGLSPNSYTFPFLFKSCAKSKAAQEGKQIHAQILKYG 108
Query: 61 FQQDAFVQTGLIDMY---------------SKCSDFVS----------------SRKVLD 89
D V T LI MY S D VS ++K+ D
Sbjct: 109 LTVDLHVHTSLISMYAQNGIVEDAHKVFDTSSHRDVVSYTAMITGYASRGNMDKAQKMFD 168
Query: 90 EMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCS----F 145
E+P+ + VVSWN++IS ++ EA+ + EM + ++ ST +V+S C+
Sbjct: 169 EIPI--KDVVSWNAMISGYAEIGRYKEALELFNEMMKMDVKPDESTMATVLSTCTHSGNV 226
Query: 146 RQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGG 205
G +H + G +N + L N+++ +Y+K G++ A +F+ + ++SW T+IGG
Sbjct: 227 ELGRQIHSWIDNHGFGSN-LKLVNALIDLYSKCGEMERAHGLFEGLQYKDVISWNTLIGG 285
Query: 206 YVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLK--SGYN 263
Y + + EA + +M ++ TP+ V L+++ CA +G + + +H + K G
Sbjct: 286 YAYINHHKEALLVFQEMLKLGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKKLKGII 345
Query: 264 NEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRL 323
L L+ MY KCG++E A +VFD +L KS+ +MI G+A G A +L R+
Sbjct: 346 TNTSLQTSLIDMYAKCGNIEAANQVFDTILNKSLSSCNAMIFGFAMHGRADAAFDLLSRM 405
Query: 324 LKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLN-GLESNRQVQTSLIHMFSKCGR 382
K + P++ T LSAC+ G G++I + + L+ +E + +I + + G
Sbjct: 406 KKDGIEPDDITFVGLLSACSHAGLSDLGRKIFKSMTLDYRIEPKLEHYGCMIDLLGRSGL 465
Query: 383 INKAKEVFERVP-DKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSIL 441
+A+E+ + + D +W +++ IH + + K+ +E P + V S +
Sbjct: 466 FKEAEELINSMTMEPDGVIWGSLLKACKIHKNLELGELIAQKLMKIEPKNPGSYVLLSNI 525
Query: 442 SACS 445
A S
Sbjct: 526 YATS 529
Score = 148 bits (373), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 106/369 (28%), Positives = 175/369 (47%), Gaps = 39/369 (10%)
Query: 157 KLGLLNNEIPLAN----SVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNV 212
K+GL N L+ +++ Y F + A S+F I E + +SW T+I G+ +
Sbjct: 2 KIGLHNTNYALSKLLDFCILTPY--FHGLPYAISVFKSIQEPNQLSWNTMIRGHALSSDP 59
Query: 213 NEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLL 272
A L M + ++P+ F L CA+ +H+ +LK G + + L
Sbjct: 60 ISALNLYVYMISLGLSPNSYTFPFLFKSCAKSKAAQEGKQIHAQILKYGLTVDLHVHTSL 119
Query: 273 VSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGG-------------------------- 306
+SMY + G +E A +VFD + V +T+MI G
Sbjct: 120 ISMYAQNGIVEDAHKVFDTSSHRDVVSYTAMITGYASRGNMDKAQKMFDEIPIKDVVSWN 179
Query: 307 -----YAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLN 361
YA++G EA+ LF ++K V+P+E+T+AT LS C G++ G++I +I +
Sbjct: 180 AMISGYAEIGRYKEALELFNEMMKMDVKPDESTMATVLSTCTHSGNVELGRQIHSWIDNH 239
Query: 362 GLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLF 421
G SN ++ +LI ++SKCG + +A +FE + KD+ W+ +I GYA +AL +F
Sbjct: 240 GFGSNLKLVNALIDLYSKCGEMERAHGLFEGLQYKDVISWNTLIGGYAYINHHKEALLVF 299
Query: 422 YKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNF-GIEPSIEHYLCLVDLL 480
+M + G P+ V SIL AC+H G +D G + GI + L+D+
Sbjct: 300 QEMLKL-GETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKKLKGIITNTSLQTSLIDMY 358
Query: 481 GRAGRFDLA 489
+ G + A
Sbjct: 359 AKCGNIEAA 367
>gi|356570738|ref|XP_003553542.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
mitochondrial-like [Glycine max]
Length = 777
Score = 365 bits (938), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 211/622 (33%), Positives = 332/622 (53%), Gaps = 15/622 (2%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI + NG + + Y ML++G + TF ++KAC I G ++H HV+K G
Sbjct: 152 MISGYSQNGQENDAIIMYIQMLRSGYFPDQLTFGSIIKACCIAGDIDLGGQLHGHVIKSG 211
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+ Q LI MY+K + V + + ++SW S+I+ ++ EA+ +
Sbjct: 212 YDHHLIAQNALISMYTKFGQIAHASDVFTM--ISTKDLISWASMITGFTQLGYEIEALYL 269
Query: 121 LKEMWVLGL-ELSASTFVSVVSGC------SFRQGISMHCCVYKLGLLNNEIPLANSVMS 173
++M+ G+ + + F SV S C F + I C + LG + S+
Sbjct: 270 FRDMFRQGVYQPNEFIFGSVFSACRSLLKPEFGRQIQGMCAKFGLG---RNVFAGCSLCD 326
Query: 174 MYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVV 233
MYAKFG + A+ F +I +VSW II N +VNEA QM M + PD +
Sbjct: 327 MYAKFGFLPSAKRAFYQIESPDLVSWNAIIAALAN-SDVNEAIYFFCQMIHMGLMPDDIT 385
Query: 234 FLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVL 293
FLNL+ C L + +HS ++K G + + N L++MYTKC +L A VF +
Sbjct: 386 FLNLLCACGSPMTLNQGMQIHSYIIKMGLDKVAAVCNSLLTMYTKCSNLHDAFNVFKDIS 445
Query: 294 EKSVFL-WTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGK 352
E + W +++ +Q P EA LFK +L + +P+ T+ T L CAEL SL G
Sbjct: 446 ENGNLVSWNAILSACSQHKQPGEAFRLFKLMLFSENKPDNITITTILGTCAELVSLEVGN 505
Query: 353 EIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHG 412
++ + V +GL + V LI M++KCG + A+ VF+ + D+ WS++I GYA G
Sbjct: 506 QVHCFSVKSGLVVDVSVSNRLIDMYAKCGLLKHARYVFDSTQNPDIVSWSSLIVGYAQFG 565
Query: 413 MGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEH 472
+G +ALNLF M+++ G++P+ V Y +LSACSH G+V++G + +M+ GI P+ EH
Sbjct: 566 LGQEALNLFRMMRNL-GVQPNEVTYLGVLSACSHIGLVEEGWHLYNTMEIELGIPPTREH 624
Query: 473 YLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLN 532
C+VDLL RAG A I + + +W LL++C H NV++ E AA+N+L L+
Sbjct: 625 VSCMVDLLARAGCLYEAENFIKKTGFDPDITMWKTLLASCKTHGNVDIAERAAENILKLD 684
Query: 533 PGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSH 592
P ++ +L++N+ SAG WKE A R LM + K PG S +E+ + VF + D SH
Sbjct: 685 PSNSAALVLLSNIHASAGNWKEVARLRNLMKQMGVQKVPGQSWIEVKDQIHVFFSEDSSH 744
Query: 593 HLSVDIRKTLKELHIKLLEAGY 614
+I L++L +++L+ GY
Sbjct: 745 PQRGNIYTMLEDLWLQMLDDGY 766
Score = 194 bits (494), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 137/483 (28%), Positives = 237/483 (49%), Gaps = 17/483 (3%)
Query: 11 FEETLSTYSSMLQ-TGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQT 69
+ E L T++ L+ + + T+ ++ AC N+ S+ GKR+H H+LK Q D +Q
Sbjct: 60 YREALDTFNFHLKNSSIQLEPSTYVNLILACTNVRSLKYGKRIHDHILKSNCQPDLVLQN 119
Query: 70 GLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGL 129
+++MY KC +RK D M +LRSVVSW +IS +S+ ++AI++ +M G
Sbjct: 120 HILNMYGKCGSLKDARKAFDTM--QLRSVVSWTIMISGYSQNGQENDAIIMYIQMLRSGY 177
Query: 130 ELSASTFVSVVSGCSFRQGI----SMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEAR 185
TF S++ C I +H V K G ++ + N+++SMY KFG++ A
Sbjct: 178 FPDQLTFGSIIKACCIAGDIDLGGQLHGHVIKSG-YDHHLIAQNALISMYTKFGQIAHAS 236
Query: 186 SIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSV-TPDLVVFLNLILGCAQV 244
+F I ++SW ++I G+ +G EA L M R V P+ +F ++ C +
Sbjct: 237 DVFTMISTKDLISWASMITGFTQLGYEIEALYLFRDMFRQGVYQPNEFIFGSVFSACRSL 296
Query: 245 GNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMI 304
+ + K G L MY K G L A+R F + + W ++I
Sbjct: 297 LKPEFGRQIQGMCAKFGLGRNVFAGCSLCDMYAKFGFLPSAKRAFYQIESPDLVSWNAII 356
Query: 305 GGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLE 364
A +EA+ F +++ + P++ T L AC +L++G +I YI+ GL+
Sbjct: 357 AALANSDV-NEAIYFFCQMIHMGLMPDDITFLNLLCACGSPMTLNQGMQIHSYIIKMGLD 415
Query: 365 SNRQVQTSLIHMFSKCGRINKAKEVFERVPDK-DLAVWSAMINGYAIHGMGDQALNLFYK 423
V SL+ M++KC ++ A VF+ + + +L W+A+++ + H +A LF
Sbjct: 416 KVAAVCNSLLTMYTKCSNLHDAFNVFKDISENGNLVSWNAILSACSQHKQPGEAFRLFKL 475
Query: 424 MQHVEGLKPDAVVYTSILSACSH--SGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLG 481
M E KPD + T+IL C+ S V + + F S++S ++ S+ + L+D+
Sbjct: 476 MLFSEN-KPDNITITTILGTCAELVSLEVGNQVHCF-SVKSGLVVDVSVSNR--LIDMYA 531
Query: 482 RAG 484
+ G
Sbjct: 532 KCG 534
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 119/392 (30%), Positives = 193/392 (49%), Gaps = 9/392 (2%)
Query: 129 LELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEA 184
++L ST+V+++ C S + G +H + K ++ L N +++MY K G + +A
Sbjct: 76 IQLEPSTYVNLILACTNVRSLKYGKRIHDHILKSNC-QPDLVLQNHILNMYGKCGSLKDA 134
Query: 185 RSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQV 244
R FD + S+VSWT +I GY G N+A + QM R PD + F ++I C
Sbjct: 135 RKAFDTMQLRSVVSWTIMISGYSQNGQENDAIIMYIQMLRSGYFPDQLTFGSIIKACCIA 194
Query: 245 GNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMI 304
G++ L +H ++KSGY++ N L+SMYTK G + A VF + K + W SMI
Sbjct: 195 GDIDLGGQLHGHVIKSGYDHHLIAQNALISMYTKFGQIAHASDVFTMISTKDLISWASMI 254
Query: 305 GGYAQLGYPSEAVNLFKRLLKTSV-RPNEATLATTLSACAELGSLSKGKEIEEYIVLNGL 363
G+ QLGY EA+ LF+ + + V +PNE + SAC L G++I+ GL
Sbjct: 255 TGFTQLGYEIEALYLFRDMFRQGVYQPNEFIFGSVFSACRSLLKPEFGRQIQGMCAKFGL 314
Query: 364 ESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYK 423
N SL M++K G + AK F ++ DL W+A+I A + ++A+ F +
Sbjct: 315 GRNVFAGCSLCDMYAKFGFLPSAKRAFYQIESPDLVSWNAIIAALANSDV-NEAIYFFCQ 373
Query: 424 MQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRA 483
M H+ GL PD + + ++L AC ++ G+ S G++ L+ + +
Sbjct: 374 MIHM-GLMPDDITFLNLLCACGSPMTLNQGMQ-IHSYIIKMGLDKVAAVCNSLLTMYTKC 431
Query: 484 GRFDLALKTIHEMPVEVQAQVWAPLLSACMKH 515
A ++ W +LSAC +H
Sbjct: 432 SNLHDAFNVFKDISENGNLVSWNAILSACSQH 463
Score = 141 bits (356), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 79/276 (28%), Positives = 146/276 (52%), Gaps = 1/276 (0%)
Query: 221 QMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCG 280
++ S+ + ++NLIL C V +L +H +LKS + L N +++MY KCG
Sbjct: 70 HLKNSSIQLEPSTYVNLILACTNVRSLKYGKRIHDHILKSNCQPDLVLQNHILNMYGKCG 129
Query: 281 DLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLS 340
L+ AR+ FD + +SV WT MI GY+Q G ++A+ ++ ++L++ P++ T + +
Sbjct: 130 SLKDARKAFDTMQLRSVVSWTIMISGYSQNGQENDAIIMYIQMLRSGYFPDQLTFGSIIK 189
Query: 341 ACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAV 400
AC G + G ++ +++ +G + + Q +LI M++K G+I A +VF + KDL
Sbjct: 190 ACCIAGDIDLGGQLHGHVIKSGYDHHLIAQNALISMYTKFGQIAHASDVFTMISTKDLIS 249
Query: 401 WSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSM 460
W++MI G+ G +AL LF M +P+ ++ S+ SAC + G + M
Sbjct: 250 WASMITGFTQLGYEIEALYLFRDMFRQGVYQPNEFIFGSVFSACRSLLKPEFGRQ-IQGM 308
Query: 461 QSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEM 496
+ FG+ ++ L D+ + G A + +++
Sbjct: 309 CAKFGLGRNVFAGCSLCDMYAKFGFLPSAKRAFYQI 344
>gi|358347043|ref|XP_003637572.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355503507|gb|AES84710.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 833
Score = 365 bits (938), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 222/668 (33%), Positives = 351/668 (52%), Gaps = 70/668 (10%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+IR++ + S L + M + +TFP V KAC I++ G +H V+++G
Sbjct: 97 LIRHALHFNSPNTALRLFRRMKTLHWTPDHYTFPFVFKACGEISNFELGASIHGCVIRLG 156
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVR-LRSVVSWNSIISAHSRACLNDEAIL 119
F+ + FV +I MY KC V +RKV DE+ R + V+WNSI+S +S + + A+
Sbjct: 157 FESNVFVCNAVISMYGKCKAVVHARKVFDELCYRGICDSVTWNSIVSVYSHCFVPNVAVS 216
Query: 120 VLKEMWV-LGLELSASTFVSVVSGCSFRQ----GISMHCCVYKLGLLNNEIPLANSVMSM 174
+ +EM V G+ V+++ C + G +H + GL+ ++ + N+++ M
Sbjct: 217 LFREMTVGYGILPDTVGVVNILPVCGYLGLGLCGRQVHGFCVRSGLVE-DVFVGNALVDM 275
Query: 175 YAKFGKVNEARSIFDEIG-----------------------------------ETSIVSW 199
YAK GK+ +A +F+ + E+ +V+W
Sbjct: 276 YAKCGKMEDANKVFERMRFKDVVTWNAMVTGYSQNGRFEDALSLFGKMREEKIESDVVTW 335
Query: 200 TTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLK 259
+++I GY G EA + QM P++V ++L+ CA VG L H +K
Sbjct: 336 SSVISGYAQRGFGCEAMDVFRQMCGCRCRPNVVTLMSLLSACASVGALLHGKETHCYSVK 395
Query: 260 ---SGYNNEDPLD----NLLVSMYTKCGDLELARRVFDAVL--EKSVFLWTSMIGGYAQL 310
G +N+D D N L+ MY KC LE+AR +FD + ++ V WT MIGGYAQ
Sbjct: 396 FILKGEHNDDTDDLAVINALIDMYAKCKSLEVARAMFDEICPKDRDVVTWTVMIGGYAQH 455
Query: 311 GYPSEAVNLFKRLLK--TSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNG-LESNR 367
G + A+ LF + K + PN+ T++ L ACA L +L GK+I Y++ ++S+
Sbjct: 456 GDANHALQLFSEMFKIDNCIVPNDFTISCVLMACARLAALKFGKQIHAYVLRRSRIDSDV 515
Query: 368 Q-VQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQH 426
V LI M+SK G ++ A+ VF+ + ++ W++++ GY +HG + A +F +M+
Sbjct: 516 LFVANCLIDMYSKSGDVDTAQVVFDSMSKRNAVSWTSLLTGYGMHGRSEDAFRVFDEMRK 575
Query: 427 VEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRF 486
E L D + + +L ACSHSGM +FG++P +EHY C+VDLLGRAGR
Sbjct: 576 -EALVLDGITFLVVLYACSHSGM-------------DFGVDPGVEHYACMVDLLGRAGRL 621
Query: 487 DLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLF 546
A++ I++MP+E VW LLSAC H N EL E+AAK LL L + G Y L++N++
Sbjct: 622 GEAMRLINDMPIEPTPVVWIALLSACRIHSNEELAEFAAKKLLELKADNDGTYTLLSNIY 681
Query: 547 TSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKELH 606
+A WK+ A LM + K PGWS V+ ++ F GDR+H S I +TL +L
Sbjct: 682 ANARRWKDVARIGYLMKRTGIKKIPGWSWVKGRKGMETFYVGDRTHLQSQKIYETLADL- 740
Query: 607 IKLLEAGY 614
IK ++A +
Sbjct: 741 IKRIKANF 748
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 136/477 (28%), Positives = 216/477 (45%), Gaps = 56/477 (11%)
Query: 97 SVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGC----SFRQGISMH 152
SV WN +I + A+ + + M L TF V C +F G S+H
Sbjct: 90 SVYWWNQLIRHALHFNSPNTALRLFRRMKTLHWTPDHYTFPFVFKACGEISNFELGASIH 149
Query: 153 CCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEI---GETSIVSWTTIIGGYVNV 209
CV +LG +N + + N+V+SMY K V AR +FDE+ G V+W +I+ Y +
Sbjct: 150 GCVIRLGFESN-VFVCNAVISMYGKCKAVVHARKVFDELCYRGICDSVTWNSIVSVYSHC 208
Query: 210 GNVNEAFGLCNQMR-RMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPL 268
N A L +M + PD V +N++ C +G +H ++SG + +
Sbjct: 209 FVPNVAVSLFREMTVGYGILPDTVGVVNILPVCGYLGLGLCGRQVHGFCVRSGLVEDVFV 268
Query: 269 DNLLVSMYTKCGDLELARRVFDAV-----------------------------------L 293
N LV MY KCG +E A +VF+ + +
Sbjct: 269 GNALVDMYAKCGKMEDANKVFERMRFKDVVTWNAMVTGYSQNGRFEDALSLFGKMREEKI 328
Query: 294 EKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKE 353
E V W+S+I GYAQ G+ EA+++F+++ RPN TL + LSACA +G+L GKE
Sbjct: 329 ESDVVTWSSVISGYAQRGFGCEAMDVFRQMCGCRCRPNVVTLMSLLSACASVGALLHGKE 388
Query: 354 IEEY---IVLNGLESNRQ----VQTSLIHMFSKCGRINKAKEVFERV--PDKDLAVWSAM 404
Y +L G ++ V +LI M++KC + A+ +F+ + D+D+ W+ M
Sbjct: 389 THCYSVKFILKGEHNDDTDDLAVINALIDMYAKCKSLEVARAMFDEICPKDRDVVTWTVM 448
Query: 405 INGYAIHGMGDQALNLFYKMQHVEG-LKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSN 463
I GYA HG + AL LF +M ++ + P+ + +L AC+ + G +
Sbjct: 449 IGGYAQHGDANHALQLFSEMFKIDNCIVPNDFTISCVLMACARLAALKFGKQIHAYVLRR 508
Query: 464 FGIEPSIEHYL-CLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVE 519
I+ + CL+D+ ++G D A M + A W LL+ H E
Sbjct: 509 SRIDSDVLFVANCLIDMYSKSGDVDTAQVVFDSMS-KRNAVSWTSLLTGYGMHGRSE 564
>gi|147843467|emb|CAN82070.1| hypothetical protein VITISV_010010 [Vitis vinifera]
Length = 1005
Score = 365 bits (938), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 201/626 (32%), Positives = 335/626 (53%), Gaps = 9/626 (1%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
M+ +NG F E L + M V N + A A + GK +H L+
Sbjct: 300 MMAGYAHNGCFVEVLELFDKMKLGNVRINKVSAVSAFLAAAETIDLEKGKEIHGCALQQR 359
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
D V T L+ MY+KC + ++++ ++ R +V+W++II+A + +EA+ +
Sbjct: 360 IDSDILVATPLMVMYAKCGETEKAKQLF--WGLQGRDLVAWSAIIAALVQTGYPEEALSL 417
Query: 121 LKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
+EM ++ + T +S++ C+ + G S+HC K + ++++ +++SMYA
Sbjct: 418 FQEMQNQKMKPNRVTLMSILPACADLSLLKLGKSIHCFTVKADM-DSDLSTGTALVSMYA 476
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K G A + F+ + IV+W ++I GY +G+ A + ++R ++ PD +
Sbjct: 477 KCGFFTAALTTFNRMSSRDIVTWNSLINGYAQIGDPYNAIDMFYKLRLSAINPDAGTMVG 536
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAV-LEK 295
++ CA + +L +H L++K G+ ++ + N L+ MY KCG L A +F+ K
Sbjct: 537 VVPACALLNDLDQGTCIHGLIVKLGFESDCHVKNALIDMYAKCGSLPSAEFLFNKTDFTK 596
Query: 296 SVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIE 355
W +I Y Q G+ EA++ F ++ + PN T + L A A L + +G
Sbjct: 597 DEVTWNVIIAAYMQNGHAKEAISSFHQMRLENFHPNSVTFVSVLPAAAYLAAFREGMAFH 656
Query: 356 EYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGD 415
I+ G SN V SLI M++KCG++ ++++F + KD W+AM++GYA+HG GD
Sbjct: 657 ACIIQMGFLSNTLVGNSLIDMYAKCGQLXYSEKLFNEMDHKDTVSWNAMLSGYAVHGHGD 716
Query: 416 QALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLC 475
+A+ LF MQ + ++ D+V + S+LSAC H G+V++G F SM + I+P +EHY C
Sbjct: 717 RAIALFSLMQESQ-VQIDSVSFVSVLSACRHXGLVEEGRKIFHSMSDKYHIKPDLEHYAC 775
Query: 476 LVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGS 535
+VDLLGRAG FD L I MPVE A VW LL +C H NV+LGE A +L+ L P +
Sbjct: 776 MVDLLGRAGLFDETLGFIKVMPVEPDAGVWGALLGSCRMHSNVKLGEVALDHLVKLEPRN 835
Query: 536 TGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLS 595
+++++++++ +G W +A AR M+D L K PG S VE+ V F GD+SH
Sbjct: 836 PAHFVVLSSIYAQSGRWADAGKARSKMNDLGLKKTPGCSWVELKNKVHAFRVGDKSHPQL 895
Query: 596 VDIRKTLKELHIKLLEAGYIAEADIV 621
+ L K+ + GY+ + V
Sbjct: 896 ESMHLLWNTLLEKMEKIGYVPDRSCV 921
Score = 258 bits (659), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 153/541 (28%), Positives = 279/541 (51%), Gaps = 13/541 (2%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MIR T + + E L Y M++ G+ + +TF VLKAC ++ +G H + + G
Sbjct: 100 MIRAYTRSKQYNEALEMYYCMVEKGLEPDKYTFTFVLKACTGALNLQEGVWFHGEIDRRG 159
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
++D F+ GL+DMYSK D +R+V D+MP R VV+WN++I+ S++ EA+
Sbjct: 160 LERDVFIGAGLVDMYSKMGDLKRAREVFDKMPKR--DVVAWNAMIAGLSQSEDPCEAVDF 217
Query: 121 LKEMWVLGLELSASTFVSVVSGCSFRQGI----SMHCCVYKLGLLNNEIPLANSVMSMYA 176
+ M ++G+E S+ + +++ G I S+H V++ + ++N ++ +Y+
Sbjct: 218 FRSMQLVGVEPSSVSLLNLFPGICKLSNIELCRSIHGYVFRRDFSS---AVSNGLIDLYS 274
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K G V+ AR +FD++ + VSW T++ GY + G E L ++M+ +V + V ++
Sbjct: 275 KCGDVDVARRVFDQMVDQDDVSWGTMMAGYAHNGCFVEVLELFDKMKLGNVRINKVSAVS 334
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
L A+ +L +H L+ +++ + L+ MY KCG+ E A+++F + +
Sbjct: 335 AFLAAAETIDLEKGKEIHGCALQQRIDSDILVATPLMVMYAKCGETEKAKQLFWGLQGRD 394
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEE 356
+ W+++I Q GYP EA++LF+ + ++PN TL + L ACA+L L GK I
Sbjct: 395 LVAWSAIIAALVQTGYPEEALSLFQEMQNQKMKPNRVTLMSILPACADLSLLKLGKSIHC 454
Query: 357 YIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQ 416
+ V ++S+ T+L+ M++KCG A F R+ +D+ W+++INGYA G
Sbjct: 455 FTVKADMDSDLSTGTALVSMYAKCGFFTAALTTFNRMSSRDIVTWNSLINGYAQIGDPYN 514
Query: 417 ALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCL 476
A+++FYK++ + + PDA ++ AC+ +D G + + G E L
Sbjct: 515 AIDMFYKLR-LSAINPDAGTMVGVVPACALLNDLDQG-TCIHGLIVKLGFESDCHVKNAL 572
Query: 477 VDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMK--HHNVELGEYAAKNLLTLNPG 534
+D+ + G A ++ W +++A M+ H + + L +P
Sbjct: 573 IDMYAKCGSLPSAEFLFNKTDFTKDEVTWNVIIAAYMQNGHAKEAISSFHQMRLENFHPN 632
Query: 535 S 535
S
Sbjct: 633 S 633
Score = 225 bits (573), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 145/483 (30%), Positives = 255/483 (52%), Gaps = 23/483 (4%)
Query: 22 LQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDF 81
L + + N +P +L +C ++N + ++H+ ++ GF+ + T LI++YS
Sbjct: 24 LSSSTYTNYLHYPRLLSSCKHLNPLL---QIHAQIIVSGFKHHHSI-THLINLYSLFHKC 79
Query: 82 VSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVS 141
+R V D P R + WNS+I A++R+ +EA+ + M GLE TF V+
Sbjct: 80 DLARSVFDSTPNPSR--ILWNSMIRAYTRSKQYNEALEMYYCMVEKGLEPDKYTFTFVLK 137
Query: 142 GCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIV 197
C+ ++G+ H + + G L ++ + ++ MY+K G + AR +FD++ + +V
Sbjct: 138 ACTGALNLQEGVWFHGEIDRRG-LERDVFIGAGLVDMYSKMGDLKRAREVFDKMPKRDVV 196
Query: 198 SWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLL 257
+W +I G + EA M+ + V P V LNL G ++ N+ L S+H +
Sbjct: 197 AWNAMIAGLSQSEDPCEAVDFFRSMQLVGVEPSSVSLLNLFPGICKLSNIELCRSIHGYV 256
Query: 258 LKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAV 317
+ +++ + N L+ +Y+KCGD+++ARRVFD ++++ W +M+ GYA G E +
Sbjct: 257 FRRDFSS--AVSNGLIDLYSKCGDVDVARRVFDQMVDQDDVSWGTMMAGYAHNGCFVEVL 314
Query: 318 NLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMF 377
LF ++ +VR N+ + + A AE L KGKEI + ++S+ V T L+ M+
Sbjct: 315 ELFDKMKLGNVRINKVSAVSAFLAAAETIDLEKGKEIHGCALQQRIDSDILVATPLMVMY 374
Query: 378 SKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVY 437
+KCG KAK++F + +DL WSA+I G ++AL+LF +MQ+ + +KP+ V
Sbjct: 375 AKCGETEKAKQLFWGLQGRDLVAWSAIIAALVQTGYPEEALSLFQEMQN-QKMKPNRVTL 433
Query: 438 TSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYL----CLVDLLGRAGRFDLALKTI 493
SIL AC+ ++ G KS+ F ++ ++ L LV + + G F AL T
Sbjct: 434 MSILPACADLSLLKLG----KSIHC-FTVKADMDSDLSTGTALVSMYAKCGFFTAALTTF 488
Query: 494 HEM 496
+ M
Sbjct: 489 NRM 491
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 77/288 (26%), Positives = 138/288 (47%), Gaps = 29/288 (10%)
Query: 234 FLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNL--LVSMYTKCGDLELARRVFDA 291
+ L+ C + L L +H+ ++ SG+ + + +L L S++ KC +LAR VFD+
Sbjct: 35 YPRLLSSCKHLNPL---LQIHAQIIVSGFKHHHSITHLINLYSLFHKC---DLARSVFDS 88
Query: 292 VLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKG 351
S LW SMI Y + +EA+ ++ +++ + P++ T L AC +L +G
Sbjct: 89 TPNPSRILWNSMIRAYTRSKQYNEALEMYYCMVEKGLEPDKYTFTFVLKACTGALNLQEG 148
Query: 352 KEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIH 411
I GLE + + L+ M+SK G + +A+EVF+++P +D+ W+AMI G +
Sbjct: 149 VWFHGEIDRRGLERDVFIGAGLVDMYSKMGDLKRAREVFDKMPKRDVVAWNAMIAGLSQS 208
Query: 412 GMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVD-----DGLSF---FKSMQSN 463
+A++ F MQ V G++P +V ++ ++ G F F S SN
Sbjct: 209 EDPCEAVDFFRSMQLV-GVEPSSVSLLNLFPGICKLSNIELCRSIHGYVFRRDFSSAVSN 267
Query: 464 FGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSA 511
L+DL + G D+A + +M V+ W +++
Sbjct: 268 -----------GLIDLYSKCGDVDVARRVFDQM-VDQDDVSWGTMMAG 303
>gi|302793246|ref|XP_002978388.1| hypothetical protein SELMODRAFT_108652 [Selaginella moellendorffii]
gi|300153737|gb|EFJ20374.1| hypothetical protein SELMODRAFT_108652 [Selaginella moellendorffii]
Length = 687
Score = 365 bits (937), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 200/613 (32%), Positives = 336/613 (54%), Gaps = 22/613 (3%)
Query: 21 MLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSD 80
ML GV N TF VL + + +++ GK +HS V + D FV T L++ Y+KC
Sbjct: 1 MLLEGVKANVITFLNVLNSVVDPDALRKGKFIHSCVRESEHSLDVFVNTALVNTYTKCGS 60
Query: 81 FVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVV 140
+RKV D MP R SV +WNS+ISA+S + + EA + + M G TF+S++
Sbjct: 61 LTDARKVFDGMPCR--SVGTWNSMISAYSISERSGEAFFIFQRMQHEGERCDRVTFLSIL 118
Query: 141 SGC----------SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDE 190
C R+ IS ++L L + ++++MYA+ A +F
Sbjct: 119 DACVNPENLQHGKHVRESISE--TSFELDLF-----VGTALITMYARCRSPENAAQVFGR 171
Query: 191 IGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLA 250
+ + ++++W+ II + + G+ EA M++ + P+ V F++L+ G L
Sbjct: 172 MKQKNLITWSAIITAFADHGHCGEALRYFRMMQQEGILPNRVTFISLLNGFTTPSGLEEL 231
Query: 251 LSMHSLLLKSGYNNEDPLDNLLVSMYTKC--GDLELARRVFDAVLEKSVFLWTSMIGGYA 308
+H L+ + G ++ + N LV++Y +C G+L++A + + E+ + W +I GY
Sbjct: 232 SRIHLLITEHGLDDTTTMSNALVNVYGRCETGELDVAEVILQEMDEQQITAWNVLINGYT 291
Query: 309 QLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQ 368
G EA+ ++RL ++ ++ T + L+AC SL++GK I V GL+S+
Sbjct: 292 LHGRSREALETYQRLQLEAIPVDKVTFISVLNACTSSTSLAEGKMIHSNAVECGLDSDVI 351
Query: 369 VQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVE 428
V+ +L +M+SKCG + A+ +F+ +P + W+ M+ YA HG ++ L L KM+ E
Sbjct: 352 VKNALTNMYSKCGSMENARRIFDSMPIRSAVSWNGMLQAYAQHGESEEVLKLIRKMEQ-E 410
Query: 429 GLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDL 488
G+K + + + S+LS+CSH+G++ +G +F S+ + GIE EHY CLVDLLGRAG+
Sbjct: 411 GVKLNGITFVSVLSSCSHAGLIAEGCQYFHSLGHDRGIEVKTEHYGCLVDLLGRAGKLQE 470
Query: 489 ALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTS 548
A K I +MP E + WA LL AC H +++ G+ AA+ LL L+PG++ ++++N+++
Sbjct: 471 AEKYISKMPSEPEIVTWASLLGACRVHKDLDRGKLAARKLLELDPGNSSASVVLSNIYSE 530
Query: 549 AGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKELHIK 608
G WK AA R M RR+ K PG S +++ V F D SH + +I ++EL
Sbjct: 531 RGDWKNAAKLRRAMASRRVKKVPGISSIQVKNKVHEFRVRDTSHPRAAEIYDKVEELCFA 590
Query: 609 LLEAGYIAEADIV 621
+ EAGY+ + +V
Sbjct: 591 MREAGYVPDTKMV 603
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 101/407 (24%), Positives = 213/407 (52%), Gaps = 11/407 (2%)
Query: 13 ETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLI 72
E + M G + TF +L AC N ++ GK V + + F+ D FV T LI
Sbjct: 94 EAFFIFQRMQHEGERCDRVTFLSILDACVNPENLQHGKHVRESISETSFELDLFVGTALI 153
Query: 73 DMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELS 132
MY++C ++ +V M + +++++W++II+A + EA+ + M G+ +
Sbjct: 154 TMYARCRSPENAAQVFGRM--KQKNLITWSAIITAFADHGHCGEALRYFRMMQQEGILPN 211
Query: 133 ASTFVSVVSGCSFRQGIS----MHCCVYKLGLLNNEIPLANSVMSMYAK--FGKVNEARS 186
TF+S+++G + G+ +H + + G L++ ++N+++++Y + G+++ A
Sbjct: 212 RVTFISLLNGFTTPSGLEELSRIHLLITEHG-LDDTTTMSNALVNVYGRCETGELDVAEV 270
Query: 187 IFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGN 246
I E+ E I +W +I GY G EA +++ ++ D V F++++ C +
Sbjct: 271 ILQEMDEQQITAWNVLINGYTLHGRSREALETYQRLQLEAIPVDKVTFISVLNACTSSTS 330
Query: 247 LFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGG 306
L +HS ++ G +++ + N L +MY+KCG +E ARR+FD++ +S W M+
Sbjct: 331 LAEGKMIHSNAVECGLDSDVIVKNALTNMYSKCGSMENARRIFDSMPIRSAVSWNGMLQA 390
Query: 307 YAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLN-GLES 365
YAQ G E + L +++ + V+ N T + LS+C+ G +++G + + + G+E
Sbjct: 391 YAQHGESEEVLKLIRKMEQEGVKLNGITFVSVLSSCSHAGLIAEGCQYFHSLGHDRGIEV 450
Query: 366 NRQVQTSLIHMFSKCGRINKAKEVFERVP-DKDLAVWSAMINGYAIH 411
+ L+ + + G++ +A++ ++P + ++ W++++ +H
Sbjct: 451 KTEHYGCLVDLLGRAGKLQEAEKYISKMPSEPEIVTWASLLGACRVH 497
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 115/211 (54%), Gaps = 9/211 (4%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+I T +G E L TY + + + TF VL AC + S+ +GK +HS+ ++ G
Sbjct: 286 LINGYTLHGRSREALETYQRLQLEAIPVDKVTFISVLNACTSSTSLAEGKMIHSNAVECG 345
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
D V+ L +MYSKC ++R++ D MP+ RS VSWN ++ A+++ ++E + +
Sbjct: 346 LDSDVIVKNALTNMYSKCGSMENARRIFDSMPI--RSAVSWNGMLQAYAQHGESEEVLKL 403
Query: 121 LKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGLLNN---EIPLAN--SVMSMY 175
+++M G++L+ TFVSV+S CS G+ C Y L ++ E+ + ++ +
Sbjct: 404 IRKMEQEGVKLNGITFVSVLSSCS-HAGLIAEGCQYFHSLGHDRGIEVKTEHYGCLVDLL 462
Query: 176 AKFGKVNEARSIFDEI-GETSIVSWTTIIGG 205
+ GK+ EA ++ E IV+W +++G
Sbjct: 463 GRAGKLQEAEKYISKMPSEPEIVTWASLLGA 493
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 70/308 (22%), Positives = 141/308 (45%), Gaps = 11/308 (3%)
Query: 7 NNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAF 66
++G E L + M Q G+ N TF +L + + + R+H + + G
Sbjct: 189 DHGHCGEALRYFRMMQQEGILPNRVTFISLLNGFTTPSGLEELSRIHLLITEHGLDDTTT 248
Query: 67 VQTGLIDMYSKCS--DFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEM 124
+ L+++Y +C + + +L EM + + +WN +I+ ++ + EA+ + +
Sbjct: 249 MSNALVNVYGRCETGELDVAEVILQEMDE--QQITAWNVLINGYTLHGRSREALETYQRL 306
Query: 125 WVLGLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGK 180
+ + + TF+SV++ C S +G +H + G L++++ + N++ +MY+K G
Sbjct: 307 QLEAIPVDKVTFISVLNACTSSTSLAEGKMIHSNAVECG-LDSDVIVKNALTNMYSKCGS 365
Query: 181 VNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILG 240
+ AR IFD + S VSW ++ Y G E L +M + V + + F++++
Sbjct: 366 MENARRIFDSMPIRSAVSWNGMLQAYAQHGESEEVLKLIRKMEQEGVKLNGITFVSVLSS 425
Query: 241 CAQVGNLFLALS-MHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVL-EKSVF 298
C+ G + HSL G + LV + + G L+ A + + E +
Sbjct: 426 CSHAGLIAEGCQYFHSLGHDRGIEVKTEHYGCLVDLLGRAGKLQEAEKYISKMPSEPEIV 485
Query: 299 LWTSMIGG 306
W S++G
Sbjct: 486 TWASLLGA 493
>gi|297834550|ref|XP_002885157.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330997|gb|EFH61416.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 655
Score = 365 bits (937), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 215/590 (36%), Positives = 329/590 (55%), Gaps = 19/590 (3%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MIR +NG E+ L Y ML +GV FT+P VLKACA + +I DGK +HSHV
Sbjct: 74 MIRAYVSNGFAEKALDLYYKMLNSGVRPTKFTYPFVLKACAGLRAIEDGKLIHSHVKCSN 133
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHS-RACLNDEAIL 119
F D +V T L+D Y+KC + + KV DEMP R +V+WN++IS S CL D L
Sbjct: 134 FAADMYVCTALVDFYAKCGELDMAIKVFDEMPK--RDIVAWNAMISGFSLHCCLTDVIGL 191
Query: 120 VLKEMWVLGLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMY 175
L L + ST V + + R+G ++H ++G +N++ + ++ +Y
Sbjct: 192 FLDMRRSDCLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMG-FSNDLVVKTGILDVY 250
Query: 176 AKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQM----RRMSVTPDL 231
AK + AR +FD + + V+W+ +IGGYV + EA + QM VTP
Sbjct: 251 AKSKCIIYARRVFDSDFKKNEVTWSAMIGGYVENEMIKEAGEVFLQMLVNADMAMVTP-- 308
Query: 232 VVFLNLIL-GCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFD 290
V + LIL GCA+ G+L +H +K+G+ + + N ++S Y K G L A R F
Sbjct: 309 -VAIGLILMGCARFGDLSGGRCVHCYAIKAGFILDLTVGNTVISFYAKYGSLCDAFRQFT 367
Query: 291 AVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSK 350
+ K + + S+I G + E+ LF ++ + +RP+ TL L+AC+ L +L
Sbjct: 368 EIGLKDIVSYNSLISGCVENCRAEESFRLFHQMKSSGIRPDITTLLGILTACSNLAALGH 427
Query: 351 GKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAI 410
G Y V+NG N + +L+ M++KCG++ AK VF+ + +D+ W+ M+ G+ I
Sbjct: 428 GSSCHGYCVVNGYAVNTSICNALMDMYTKCGKLYVAKRVFDTMHKRDIVSWNTMLFGFGI 487
Query: 411 HGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSM-QSNFGIEPS 469
HG+G +AL+LF MQ G+ PD V +ILSACSHSG+VD+G F SM + +F + P
Sbjct: 488 HGLGKEALSLFNSMQDT-GVHPDEVTLLAILSACSHSGLVDEGKQLFNSMSRGDFNVIPR 546
Query: 470 IEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLL 529
++HY C+ DLL RAG D A +++MP E +V LLSAC + NVELG +K +
Sbjct: 547 LDHYNCMTDLLARAGYLDEAYDFVNKMPFEPDIRVLGTLLSACWTYKNVELGNEVSKKMQ 606
Query: 530 TLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEID 579
+L +T + +L++N +++A W++AA R L K PG+S V++D
Sbjct: 607 SLGE-TTESLVLLSNTYSAAERWEDAAKIRMTQKKSGLLKTPGYSWVDVD 655
Score = 155 bits (391), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 116/475 (24%), Positives = 230/475 (48%), Gaps = 17/475 (3%)
Query: 33 FPLVLKACANINSIWDGKRVHSHVLKVGFQ-QDAFVQTGLIDMYSKCSDFVSSRKVLDEM 91
F +L++C ++ G+ +H H+LK + V L +Y+ C++ +R V DE+
Sbjct: 2 FLRLLESCIRSRNLILGQIIHQHLLKRSLTLSSSTVLVNLTRLYASCNEVELARHVFDEI 61
Query: 92 PVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGC----SFRQ 147
P + ++W+ +I A+ ++A+ + +M G+ + T+ V+ C +
Sbjct: 62 PHPRINPIAWDLMIRAYVSNGFAEKALDLYYKMLNSGVRPTKFTYPFVLKACAGLRAIED 121
Query: 148 GISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYV 207
G +H V K ++ + +++ YAK G+++ A +FDE+ + IV+W +I G+
Sbjct: 122 GKLIHSHV-KCSNFAADMYVCTALVDFYAKCGELDMAIKVFDEMPKRDIVAWNAMISGFS 180
Query: 208 NVGNVNEAFGLCNQMRRMS-VTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNED 266
+ + GL MRR ++P+L + + + G L ++H + G++N+
Sbjct: 181 LHCCLTDVIGLFLDMRRSDCLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGFSNDL 240
Query: 267 PLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKT 326
+ ++ +Y K + ARRVFD+ +K+ W++MIGGY + EA +F ++L
Sbjct: 241 VVKTGILDVYAKSKCIIYARRVFDSDFKKNEVTWSAMIGGYVENEMIKEAGEVFLQMLVN 300
Query: 327 S----VRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGR 382
+ V P + L CA G LS G+ + Y + G + V ++I ++K G
Sbjct: 301 ADMAMVTP--VAIGLILMGCARFGDLSGGRCVHCYAIKAGFILDLTVGNTVISFYAKYGS 358
Query: 383 INKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILS 442
+ A F + KD+ ++++I+G + +++ LF++M+ G++PD IL+
Sbjct: 359 LCDAFRQFTEIGLKDIVSYNSLISGCVENCRAEESFRLFHQMKS-SGIRPDITTLLGILT 417
Query: 443 ACSHSGMVDDGLSFFKSMQSN-FGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEM 496
ACS+ + G S N + + SI + L+D+ + G+ +A + M
Sbjct: 418 ACSNLAALGHGSSCHGYCVVNGYAVNTSICN--ALMDMYTKCGKLYVAKRVFDTM 470
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 119/225 (52%), Gaps = 5/225 (2%)
Query: 233 VFLNLILGCAQVGNLFLALSMHSLLLKSGY--NNEDPLDNLLVSMYTKCGDLELARRVFD 290
+FL L+ C + NL L +H LLK ++ L NL +Y C ++ELAR VFD
Sbjct: 1 MFLRLLESCIRSRNLILGQIIHQHLLKRSLTLSSSTVLVNL-TRLYASCNEVELARHVFD 59
Query: 291 AVLEKSV--FLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSL 348
+ + W MI Y G+ +A++L+ ++L + VRP + T L ACA L ++
Sbjct: 60 EIPHPRINPIAWDLMIRAYVSNGFAEKALDLYYKMLNSGVRPTKFTYPFVLKACAGLRAI 119
Query: 349 SKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGY 408
GK I ++ + ++ V T+L+ ++KCG ++ A +VF+ +P +D+ W+AMI+G+
Sbjct: 120 EDGKLIHSHVKCSNFAADMYVCTALVDFYAKCGELDMAIKVFDEMPKRDIVAWNAMISGF 179
Query: 409 AIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDG 453
++H + LF M+ + L P+ + A +G + +G
Sbjct: 180 SLHCCLTDVIGLFLDMRRSDCLSPNLSTIVGMFPALGRAGALREG 224
>gi|449528002|ref|XP_004170996.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g12770-like, partial [Cucumis sativus]
Length = 658
Score = 365 bits (937), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 202/575 (35%), Positives = 329/575 (57%), Gaps = 9/575 (1%)
Query: 51 RVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSR 110
+V+ ++ G + F+ I+ D + K E V ++ WN+II +++
Sbjct: 5 QVYVQLIVSGLHKCRFLMIKFINACLHFGDVNYAHKAFRE--VSEPDILLWNAIIKGYTQ 62
Query: 111 ACLNDEAILVLKEMWVLGLELSASTFVSVVSGCSFRQ----GISMHCCVYKLGLLNNEIP 166
+ D I + +M + + + TF+ V+ C G +H +K G +N +
Sbjct: 63 KNIVDAPIRMYMDMQISQVHPNCFTFLYVLKACGGTSVEGIGKQIHGQTFKYGFGSN-VF 121
Query: 167 LANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMS 226
+ NS++SMYAKFG+++ AR +FD++ + ++VSWT+II GYV G+ EA + +MR+ +
Sbjct: 122 VQNSLVSMYAKFGQISYARIVFDKLHDRTVVSWTSIISGYVQNGDPMEALNVFKEMRQCN 181
Query: 227 VTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELAR 286
V PD + ++++ V +L S+H L+ K G E + L +MY K G +E+AR
Sbjct: 182 VKPDWIALVSVMTAYTNVEDLGQGKSIHGLVTKLGLEFEPDIVISLTTMYAKRGLVEVAR 241
Query: 287 RVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELG 346
F+ + + ++ LW +MI GYA GY EA+ LF+ ++ ++R + T+ + + A A++G
Sbjct: 242 FFFNRMEKPNLILWNAMISGYANNGYGEEAIKLFREMITKNIRVDSITMRSAVLASAQVG 301
Query: 347 SLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMIN 406
SL + ++ YI + + V T LI M++KCG I A+ VF+RV DKD+ +WS MI
Sbjct: 302 SLELARWLDGYISKSEYRDDTFVNTGLIDMYAKCGSIYLARCVFDRVADKDVVLWSVMIM 361
Query: 407 GYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGI 466
GY +HG G +A+ L+ +M+ G+ P+ + +L+AC +SG+V +G F M + GI
Sbjct: 362 GYGLHGHGQEAICLYNEMKQA-GVCPNDGTFIGLLTACKNSGLVKEGWELFHLM-PDHGI 419
Query: 467 EPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAK 526
EP +HY C+VDLLGRAG + A I MP++ VW LLSAC H V LGE AA+
Sbjct: 420 EPHHQHYSCVVDLLGRAGYLNQAYDFIMSMPIKPGVSVWGALLSACKIHRKVRLGEIAAE 479
Query: 527 NLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFV 586
L L+P +TG+Y+ ++NL+ SA +W A R +M + L K+ G S +EI+G+++ F
Sbjct: 480 QLFILDPYNTGHYVQLSNLYASAHLWTRVANVRLMMTQKGLNKDLGHSSIEINGNLETFQ 539
Query: 587 AGDRSHHLSVDIRKTLKELHIKLLEAGYIAEADIV 621
GDRSH S +I + L L +L AGY+ + V
Sbjct: 540 VGDRSHPKSKEIFEELDRLEKRLKAAGYVPHMESV 574
Score = 221 bits (564), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 139/416 (33%), Positives = 218/416 (52%), Gaps = 8/416 (1%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+I+ T + + Y M + VH N FTF VLKAC + GK++H K G
Sbjct: 56 IIKGYTQKNIVDAPIRMYMDMQISQVHPNCFTFLYVLKACGGTSVEGIGKQIHGQTFKYG 115
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F + FVQ L+ MY+K +R V D++ R+VVSW SIIS + + EA+ V
Sbjct: 116 FGSNVFVQNSLVSMYAKFGQISYARIVFDKL--HDRTVVSWTSIISGYVQNGDPMEALNV 173
Query: 121 LKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
KEM ++ VSV++ + QG S+H V KLG L E + S+ +MYA
Sbjct: 174 FKEMRQCNVKPDWIALVSVMTAYTNVEDLGQGKSIHGLVTKLG-LEFEPDIVISLTTMYA 232
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K G V AR F+ + + +++ W +I GY N G EA L +M ++ D + +
Sbjct: 233 KRGLVEVARFFFNRMEKPNLILWNAMISGYANNGYGEEAIKLFREMITKNIRVDSITMRS 292
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
+L AQVG+L LA + + KS Y ++ ++ L+ MY KCG + LAR VFD V +K
Sbjct: 293 AVLASAQVGSLELARWLDGYISKSEYRDDTFVNTGLIDMYAKCGSIYLARCVFDRVADKD 352
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEE 356
V LW+ MI GY G+ EA+ L+ + + V PN+ T L+AC G + +G E+
Sbjct: 353 VVLWSVMIMGYGLHGHGQEAICLYNEMKQAGVCPNDGTFIGLLTACKNSGLVKEGWELFH 412
Query: 357 YIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKD-LAVWSAMINGYAIH 411
+ +G+E + Q + ++ + + G +N+A + +P K ++VW A+++ IH
Sbjct: 413 LMPDHGIEPHHQHYSCVVDLLGRAGYLNQAYDFIMSMPIKPGVSVWGALLSACKIH 468
>gi|357497455|ref|XP_003619016.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494031|gb|AES75234.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 999
Score = 365 bits (937), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 202/623 (32%), Positives = 330/623 (52%), Gaps = 36/623 (5%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+I G L+ + M + T +L ACA++ ++ +GK+ HS+ +K G
Sbjct: 323 LISGLAQQGYINRALALFKKMNLDCQKPDCVTVASLLSACASVGALPNGKQFHSYAIKAG 382
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
D V+ L+D+Y KCSD ++ + + + + + +++ +
Sbjct: 383 MTSDIVVEGSLLDLYVKCSDIKTAHEFF----------LCYGQLDNL-------NKSFQI 425
Query: 121 LKEMWVLGLELSASTFVSVVSGCSF----RQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
+M + G+ + T+ S++ C+ G +H V K G N + +++ ++ MYA
Sbjct: 426 FTQMQIEGIVPNQFTYPSILKTCTTLGATDLGEQIHTQVLKTGFQFN-VYVSSVLIDMYA 484
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K GK++ A IF + E +VSWT +I GY EA L +M+ + D + F +
Sbjct: 485 KHGKLDHALKIFRRLKENDVVSWTAMIAGYTQHDKFTEALNLFKEMQDQGIKSDNIGFAS 544
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
I CA + L +H+ SGY+++ + N LVS+Y +CG + A FD + K
Sbjct: 545 AISACAGIQALDQGRQIHAQSCLSGYSDDLSIGNALVSLYARCGKVREAYAAFDQIYAKD 604
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEE 356
W S++ G+AQ GY EA+N+F ++ K + N T + +SA A + ++ GK+I
Sbjct: 605 NVSWNSLVSGFAQSGYFEEALNIFAQMNKAGLEINSFTFGSAVSAAANIANVRIGKQIHG 664
Query: 357 YIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQ 416
I G +S +V +LI +++KCG I D W++MI GY+ HG G +
Sbjct: 665 MIRKTGYDSETEVSNALITLYAKCGTI-------------DDISWNSMITGYSQHGCGFE 711
Query: 417 ALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCL 476
AL LF M+ ++ L P+ V + +LSACSH G+VD+G+S+F+SM + P EHY C+
Sbjct: 712 ALKLFEDMKQLDVL-PNHVTFVGVLSACSHVGLVDEGISYFRSMSEAHNLVPKPEHYACV 770
Query: 477 VDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGST 536
VDLLGR+G A + + EMP++ A VW LLSAC H N+++GE+AA +LL L P +
Sbjct: 771 VDLLGRSGLLSRAKRFVEEMPIQPDAMVWRTLLSACNVHKNIDIGEFAASHLLELEPKDS 830
Query: 537 GNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSV 596
Y+L++N++ +G W R +M DR + KEPG S VE+D SV F AGD++H +
Sbjct: 831 ATYVLVSNMYAVSGKWDCRDRTRQMMKDRGVKKEPGRSWVEVDNSVHAFFAGDQNHPRAD 890
Query: 597 DIRKTLKELHIKLLEAGYIAEAD 619
I + L+ L + E GY+ +
Sbjct: 891 MIYEYLRGLDFRAAENGYVPRCN 913
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 135/504 (26%), Positives = 225/504 (44%), Gaps = 67/504 (13%)
Query: 21 MLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSD 80
M Q GV NS TF +L+ C N S +DG + LID Y D
Sbjct: 72 MEQHGVRANSQTFLWLLEGCLNSRSFYDGLK-------------------LIDFYLAFGD 112
Query: 81 FVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVV 140
+ V DEMP+R S+ WN I + L + + M +E F V+
Sbjct: 113 LNCAVNVFDEMPIR--SLSCWNRIFNTFIAERLMGRVPGLFRRMLTKNVEFDERIFAVVL 170
Query: 141 SGCS-----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETS 195
GCS FR +H G ++ + N ++ +Y K G ++ A+ +F+ +
Sbjct: 171 RGCSGNAVSFRFVEQIHAKTITSGFESSTF-ICNPLIDLYFKNGFLSSAKKVFENLKARD 229
Query: 196 IVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLIL-GCAQVGNLFLALSMH 254
VSW +I G G EA +++F ++L C +V +H
Sbjct: 230 SVSWVAMISGLSQNGYEEEA---------------MLLFCQIVLSACTKVEFFEFGKQLH 274
Query: 255 SLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPS 314
L+LK G+++E + N LV++Y++ G+L A ++F + ++ + S+I G AQ GY +
Sbjct: 275 GLVLKQGFSSETYVCNALVTLYSRSGNLSSAEQIFHCMSQRDRVSYNSLISGLAQQGYIN 334
Query: 315 EAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLI 374
A+ LFK++ +P+ T+A+ LSACA +G+L GK+ Y + G+ S+ V+ SL+
Sbjct: 335 RALALFKKMNLDCQKPDCVTVASLLSACASVGALPNGKQFHSYAIKAGMTSDIVVEGSLL 394
Query: 375 HMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGD---QALNLFYKMQHVEGLK 431
++ KC I A E F +G D ++ +F +MQ +EG+
Sbjct: 395 DLYVKCSDIKTAHEFF------------------LCYGQLDNLNKSFQIFTQMQ-IEGIV 435
Query: 432 PDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALK 491
P+ Y SIL C+ G D G + G + ++ L+D+ + G+ D ALK
Sbjct: 436 PNQFTYPSILKTCTTLGATDLGEQIHTQVLKT-GFQFNVYVSSVLIDMYAKHGKLDHALK 494
Query: 492 TIHEMPVEVQAQVWAPLLSACMKH 515
+ E W +++ +H
Sbjct: 495 IFRRLK-ENDVVSWTAMIAGYTQH 517
>gi|357521295|ref|XP_003630936.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355524958|gb|AET05412.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 959
Score = 365 bits (936), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 206/621 (33%), Positives = 339/621 (54%), Gaps = 8/621 (1%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
M+ NG F L T+ M + V NS +F +L CA + G ++H V++ G
Sbjct: 249 MLNGYVKNGDFNSALGTFQEMRNSCVKPNSVSFVCLLSVCATRGIVRAGIQLHGLVIRSG 308
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F+ D V +I MYSKC + +RK+ D MP V+WN +I+ + + DEA+ +
Sbjct: 309 FESDPTVANTIITMYSKCGNLFDARKIFDIMPQT--DTVTWNGLIAGYVQNGFTDEAVAL 366
Query: 121 LKEMWVLGLELSASTFVS----VVSGCSFRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
K M G++L + TF S V+ S + +H + + G+ ++ L ++++ +Y
Sbjct: 367 FKAMVTSGVKLDSITFASFLPSVLKSGSLKYCKEVHSYIVRHGV-PFDVYLKSALVDIYF 425
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K G V A F + + T +I GYV G EA L + + + P+ + +
Sbjct: 426 KGGDVEMACKTFQQNTLVDVAVCTAMISGYVLNGLNVEALNLFRWLIQEGMVPNCLTMAS 485
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
++ CA + +L L +H +LK G N + + + MY K G L+LA + F + K
Sbjct: 486 VLPACAALASLKLGKELHCDILKKGLENVCQVGSSITYMYAKSGRLDLAYQFFRRMPVKD 545
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEE 356
W MI ++Q G P A++LF+++ + + + +L+ TLSACA +L GKE+
Sbjct: 546 SVCWNLMIVSFSQNGKPELAIDLFRQMGTSGTKFDSVSLSATLSACANYPALYYGKELHC 605
Query: 357 YIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQ 416
++V N S+ V ++LI M+SKCG++ A+ VF+ + K+ W+++I Y HG +
Sbjct: 606 FVVRNSFISDTFVASTLIDMYSKCGKLALARSVFDMMDWKNEVSWNSIIAAYGNHGRPRE 665
Query: 417 ALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCL 476
L+LF++M G++PD V + I+SAC H+G+VD+G+ +F+ M +GI +EH+ C+
Sbjct: 666 CLDLFHEMVEA-GIQPDHVTFLVIMSACGHAGLVDEGIYYFRCMTEEYGICARMEHFACM 724
Query: 477 VDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGST 536
VDL GRAGR A TI MP A W LL AC H NVEL + A+K+L+ L+P ++
Sbjct: 725 VDLYGRAGRLHEAFDTIKSMPFTPDAGTWGSLLGACRLHGNVELAKLASKHLVELDPNNS 784
Query: 537 GNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSV 596
G Y+L++N+ AG W+ R LM ++ + K PG+S ++++G +F A D H SV
Sbjct: 785 GYYVLLSNVHAGAGEWESVLKVRSLMKEKGVQKIPGYSWIDVNGGTHMFSAADGCHPQSV 844
Query: 597 DIRKTLKELHIKLLEAGYIAE 617
+I LK L ++L + GY+ +
Sbjct: 845 EIYLILKNLLLELRKHGYVPQ 865
Score = 242 bits (617), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 159/519 (30%), Positives = 276/519 (53%), Gaps = 10/519 (1%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+IR + G F+ L + ML + V + +TFP V+KAC +N++ K VH +G
Sbjct: 148 LIRGFSMLGCFDFALMFFFRMLGSNVAPDKYTFPYVIKACGGLNNVPLCKMVHELARSMG 207
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F D F+ + LI +Y+ ++ + DE+PV R + WN +++ + + + A+
Sbjct: 208 FHMDLFIGSSLIKLYTDNGYIHDAKYLFDELPV--RDCILWNVMLNGYVKNGDFNSALGT 265
Query: 121 LKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
+EM ++ ++ +FV ++S C+ R GI +H V + G ++ +AN++++MY+
Sbjct: 266 FQEMRNSCVKPNSVSFVCLLSVCATRGIVRAGIQLHGLVIRSG-FESDPTVANTIITMYS 324
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K G + +AR IFD + +T V+W +I GYV G +EA L M V D + F +
Sbjct: 325 KCGNLFDARKIFDIMPQTDTVTWNGLIAGYVQNGFTDEAVALFKAMVTSGVKLDSITFAS 384
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
+ + G+L +HS +++ G + L + LV +Y K GD+E+A + F
Sbjct: 385 FLPSVLKSGSLKYCKEVHSYIVRHGVPFDVYLKSALVDIYFKGGDVEMACKTFQQNTLVD 444
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEE 356
V + T+MI GY G EA+NLF+ L++ + PN T+A+ L ACA L SL GKE+
Sbjct: 445 VAVCTAMISGYVLNGLNVEALNLFRWLIQEGMVPNCLTMASVLPACAALASLKLGKELHC 504
Query: 357 YIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQ 416
I+ GLE+ QV +S+ +M++K GR++ A + F R+P KD W+ MI ++ +G +
Sbjct: 505 DILKKGLENVCQVGSSITYMYAKSGRLDLAYQFFRRMPVKDSVCWNLMIVSFSQNGKPEL 564
Query: 417 ALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCL 476
A++LF +M G K D+V ++ LSAC++ + G + N I + L
Sbjct: 565 AIDLFRQMG-TSGTKFDSVSLSATLSACANYPALYYGKELHCFVVRNSFISDTFVAST-L 622
Query: 477 VDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKH 515
+D+ + G+ LA +++ +M W +++A H
Sbjct: 623 IDMYSKCGKLALA-RSVFDMMDWKNEVSWNSIIAAYGNH 660
Score = 207 bits (527), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 127/455 (27%), Positives = 236/455 (51%), Gaps = 11/455 (2%)
Query: 50 KRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVS--WNSIISA 107
+++H+ VL G + + ++ MY C F K + + RL+ S WN +I
Sbjct: 96 RQIHAKVLVCGMNGSLTLGSRMLGMYVLCRSF----KDVGNLFCRLQLCYSLPWNWLIRG 151
Query: 108 HSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGL---LNNE 164
S D A++ M + TF V+ C + + V++L + +
Sbjct: 152 FSMLGCFDFALMFFFRMLGSNVAPDKYTFPYVIKACGGLNNVPLCKMVHELARSMGFHMD 211
Query: 165 IPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRR 224
+ + +S++ +Y G +++A+ +FDE+ + W ++ GYV G+ N A G +MR
Sbjct: 212 LFIGSSLIKLYTDNGYIHDAKYLFDELPVRDCILWNVMLNGYVKNGDFNSALGTFQEMRN 271
Query: 225 MSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLEL 284
V P+ V F+ L+ CA G + + +H L+++SG+ ++ + N +++MY+KCG+L
Sbjct: 272 SCVKPNSVSFVCLLSVCATRGIVRAGIQLHGLVIRSGFESDPTVANTIITMYSKCGNLFD 331
Query: 285 ARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAE 344
AR++FD + + W +I GY Q G+ EAV LFK ++ + V+ + T A+ L + +
Sbjct: 332 ARKIFDIMPQTDTVTWNGLIAGYVQNGFTDEAVALFKAMVTSGVKLDSITFASFLPSVLK 391
Query: 345 LGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAM 404
GSL KE+ YIV +G+ + ++++L+ ++ K G + A + F++ D+AV +AM
Sbjct: 392 SGSLKYCKEVHSYIVRHGVPFDVYLKSALVDIYFKGGDVEMACKTFQQNTLVDVAVCTAM 451
Query: 405 INGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNF 464
I+GY ++G+ +ALNLF + EG+ P+ + S+L AC+ + G +
Sbjct: 452 ISGYVLNGLNVEALNLFRWLIQ-EGMVPNCLTMASVLPACAALASLKLGKELHCDILKK- 509
Query: 465 GIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVE 499
G+E + + + ++GR DLA + MPV+
Sbjct: 510 GLENVCQVGSSITYMYAKSGRLDLAYQFFRRMPVK 544
>gi|356513929|ref|XP_003525660.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Glycine max]
Length = 736
Score = 365 bits (936), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 206/627 (32%), Positives = 335/627 (53%), Gaps = 46/627 (7%)
Query: 36 VLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDM--YSKCSDFVSSRKVLDEMPV 93
+L C +I S+ K++HS ++K G F Q+ LI+ S D + + +
Sbjct: 31 LLAKCPDIPSL---KQIHSLIIKSGLHNTLFAQSKLIEFCALSPSRDLSYALSLFHSIHH 87
Query: 94 RLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCS----FRQGI 149
+ ++ WN++I AHS ++ + +M GL ++ TF S+ C+ +
Sbjct: 88 QPPNIFIWNTLIRAHSLTPTPTSSLHLFSQMLHSGLYPNSHTFPSLFKSCAKSKATHEAK 147
Query: 150 SMHCCVYKLGLLNNEIPLANSVMSMYAKFGK----------------------------- 180
+H KL L + + S++ MY++ G+
Sbjct: 148 QLHAHALKLAL-HLHPHVHTSLIHMYSQVGELRHARLVFDKSTLRDAVSFTALITGYVSE 206
Query: 181 --VNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLI 238
V++AR +FDEI +VSW +I GYV G EA +M+ V+P+ ++++
Sbjct: 207 GHVDDARRLFDEIPAKDVVSWNAMIAGYVQSGRFEEALACFTRMQEADVSPNQSTMVSVL 266
Query: 239 LGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVF 298
C + +L L + S + G+ L N LV MY+KCG++ AR++FD + +K V
Sbjct: 267 SACGHLRSLELGKWIGSWVRDRGFGKNLQLVNALVDMYSKCGEIGTARKLFDGMEDKDVI 326
Query: 299 LWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYI 358
LW +MIGGY L EA+ LF+ +L+ +V PN+ T L ACA LG+L GK + YI
Sbjct: 327 LWNTMIGGYCHLSLYEEALVLFEVMLRENVTPNDVTFLAVLPACASLGALDLGKWVHAYI 386
Query: 359 VLN----GLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMG 414
N G +N + TS+I M++KCG + A++VF + + LA W+AMI+G A++G
Sbjct: 387 DKNLKGTGNVNNVSLWTSIIVMYAKCGCVEVAEQVFRSMGSRSLASWNAMISGLAMNGHA 446
Query: 415 DQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYL 474
++AL LF +M + EG +PD + + +LSAC+ +G V+ G +F SM ++GI P ++HY
Sbjct: 447 ERALGLFEEMIN-EGFQPDDITFVGVLSACTQAGFVELGHRYFSSMNKDYGISPKLQHYG 505
Query: 475 CLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPG 534
C++DLL R+G+FD A + M +E +W LL+AC H VE GEY A+ L L P
Sbjct: 506 CMIDLLARSGKFDEAKVLMGNMEMEPDGAIWGSLLNACRIHGQVEFGEYVAERLFELEPE 565
Query: 535 STGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHL 594
++G Y+L++N++ AG W + A R ++D+ + K PG + +EIDG V F+ GD+ H
Sbjct: 566 NSGAYVLLSNIYAGAGRWDDVAKIRTKLNDKGMKKVPGCTSIEIDGVVHEFLVGDKFHPQ 625
Query: 595 SVDIRKTLKELHIKLLEAGYIAEADIV 621
S +I + L E+ L E G++ + V
Sbjct: 626 SENIFRMLDEVDRLLEETGFVPDTSEV 652
Score = 199 bits (507), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 132/455 (29%), Positives = 229/455 (50%), Gaps = 48/455 (10%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+IR + + +L +S ML +G++ NS TFP + K+CA + + K++H+H LK+
Sbjct: 98 LIRAHSLTPTPTSSLHLFSQMLHSGLYPNSHTFPSLFKSCAKSKATHEAKQLHAHALKLA 157
Query: 61 FQQDAFVQTGLIDMYSKCSD-------------------------FVS------SRKVLD 89
V T LI MYS+ + +VS +R++ D
Sbjct: 158 LHLHPHVHTSLIHMYSQVGELRHARLVFDKSTLRDAVSFTALITGYVSEGHVDDARRLFD 217
Query: 90 EMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGC----SF 145
E+P + VVSWN++I+ + ++ +EA+ M + + ST VSV+S C S
Sbjct: 218 EIPA--KDVVSWNAMIAGYVQSGRFEEALACFTRMQEADVSPNQSTMVSVLSACGHLRSL 275
Query: 146 RQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGG 205
G + V G N + L N+++ MY+K G++ AR +FD + + ++ W T+IGG
Sbjct: 276 ELGKWIGSWVRDRGFGKN-LQLVNALVDMYSKCGEIGTARKLFDGMEDKDVILWNTMIGG 334
Query: 206 YVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLK----SG 261
Y ++ EA L M R +VTP+ V FL ++ CA +G L L +H+ + K +G
Sbjct: 335 YCHLSLYEEALVLFEVMLRENVTPNDVTFLAVLPACASLGALDLGKWVHAYIDKNLKGTG 394
Query: 262 YNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFK 321
N L ++ MY KCG +E+A +VF ++ +S+ W +MI G A G+ A+ LF+
Sbjct: 395 NVNNVSLWTSIIVMYAKCGCVEVAEQVFRSMGSRSLASWNAMISGLAMNGHAERALGLFE 454
Query: 322 RLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLN---GLESNRQVQTSLIHMFS 378
++ +P++ T LSAC + G + G + +N G+ Q +I + +
Sbjct: 455 EMINEGFQPDDITFVGVLSACTQAGFVELGHRY--FSSMNKDYGISPKLQHYGCMIDLLA 512
Query: 379 KCGRINKAKEVFERVP-DKDLAVWSAMINGYAIHG 412
+ G+ ++AK + + + D A+W +++N IHG
Sbjct: 513 RSGKFDEAKVLMGNMEMEPDGAIWGSLLNACRIHG 547
>gi|224135349|ref|XP_002322051.1| predicted protein [Populus trichocarpa]
gi|222869047|gb|EEF06178.1| predicted protein [Populus trichocarpa]
Length = 924
Score = 365 bits (936), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 210/622 (33%), Positives = 338/622 (54%), Gaps = 14/622 (2%)
Query: 1 MIRNSTNNGSFEETLSTYSSML-QTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKV 59
MI + NG ++ ML + G+ + T +L CA + G +H +K+
Sbjct: 218 MICAFSENGFSRDSFDLLMEMLGEEGLLPDVVTVVTILPVCAGEGEVDIGMGIHGLAVKL 277
Query: 60 GFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAIL 119
G ++ V ++ MYSKC ++ + + ++VVSWN++ISA S +EA
Sbjct: 278 GLSEEVMVNNAMVYMYSKCGYLNEAQ--MSFVKNNNKNVVSWNTMISAFSLEGDVNEAFN 335
Query: 120 VLKEMWVLGLELSAS--TFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMS 173
+L+EM + G E+ A+ T ++V+ C R +H Y + L+N+ +
Sbjct: 336 LLQEMQIQGEEMKANEVTILNVLPACLDKLQLRSLKELHG--YSFRHCFQHVELSNAFIL 393
Query: 174 MYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVV 233
YAK G +N A +F IG+ ++ SW +IGG+ G+ +A L QM PD
Sbjct: 394 AYAKCGALNSAEKVFHGIGDKTVSSWNALIGGHAQNGDPRKALHLLFQMTYSGQQPDWFT 453
Query: 234 FLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVL 293
+L+L CA + +L +H +L++G + + L+S Y CG AR +FD +
Sbjct: 454 ISSLLLACAHLKSLQYGKEIHGYVLRNGLETDFFVGTSLLSHYIHCGKASSARVLFDRMK 513
Query: 294 EKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKE 353
+K++ W +MI GY+Q G P E++ LF++ L ++ +E + + AC++L +L GKE
Sbjct: 514 DKNLVSWNAMISGYSQNGLPYESLALFRKSLSEGIQSHEIAIVSVFGACSQLSALRLGKE 573
Query: 354 IEEYIVLNGLESNRQ-VQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHG 412
Y VL L++ V S+I M++K G I ++++VF+ + DK++A W+A+I + IHG
Sbjct: 574 AHGY-VLKALQTEDAFVGCSIIDMYAKSGCIKESRKVFDGLKDKNVASWNAIIVAHGIHG 632
Query: 413 MGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEH 472
G +A+ L+ +M+ V G PD Y IL AC H+G+V++GL +FK MQ+ IEP +EH
Sbjct: 633 HGKEAIELYERMKKV-GQMPDRFTYIGILMACGHAGLVEEGLKYFKEMQNFNLIEPKLEH 691
Query: 473 YLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLN 532
Y CL+D+L RAGR D AL+ ++EMP E ++W+ LL +C +E+GE AK LL L
Sbjct: 692 YACLIDMLARAGRLDDALRLVNEMPEEADNRIWSSLLRSCRTFGALEIGEKVAKKLLELE 751
Query: 533 PGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSH 592
P NY+L++NL+ G W R +M + L K+ G S +E+ G V FV GD
Sbjct: 752 PDKAENYVLLSNLYAGLGKWDGVRRVRQMMKEIGLQKDAGCSWIEVGGRVYSFVVGDSLQ 811
Query: 593 HLSVDIRKTLKELHIKLLEAGY 614
S +IR + L ++ E GY
Sbjct: 812 PKSAEIRVIWRRLEERISEIGY 833
Score = 242 bits (618), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 151/454 (33%), Positives = 251/454 (55%), Gaps = 13/454 (2%)
Query: 1 MIRNSTNNGSFEETLSTYSSML-QTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKV 59
++ T NG + + + + ++ T ++FTFP V+KAC I + G+ +H V+K+
Sbjct: 116 LVSGYTRNGLYGDVVKVFMDLVSDTDFQPDNFTFPSVIKACGGILDVRLGEVIHGMVIKM 175
Query: 60 GFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAIL 119
G D FV L+ MY KC + KV D MP ++VSWNS+I A S + ++
Sbjct: 176 GLVLDVFVGNALVGMYGKCGAVDEAMKVFDFMPE--TNLVSWNSMICAFSENGFSRDSFD 233
Query: 120 VLKEMW-VLGLELSASTFVSVVSGCSFRQ----GISMHCCVYKLGLLNNEIPLANSVMSM 174
+L EM GL T V+++ C+ G+ +H KLG L+ E+ + N+++ M
Sbjct: 234 LLMEMLGEEGLLPDVVTVVTILPVCAGEGEVDIGMGIHGLAVKLG-LSEEVMVNNAMVYM 292
Query: 175 YAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRM--SVTPDLV 232
Y+K G +NEA+ F + ++VSW T+I + G+VNEAF L +M+ + + V
Sbjct: 293 YSKCGYLNEAQMSFVKNNNKNVVSWNTMISAFSLEGDVNEAFNLLQEMQIQGEEMKANEV 352
Query: 233 VFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAV 292
LN++ C L +H + + + + L N + Y KCG L A +VF +
Sbjct: 353 TILNVLPACLDKLQLRSLKELHGYSFRHCFQHVE-LSNAFILAYAKCGALNSAEKVFHGI 411
Query: 293 LEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGK 352
+K+V W ++IGG+AQ G P +A++L ++ + +P+ T+++ L ACA L SL GK
Sbjct: 412 GDKTVSSWNALIGGHAQNGDPRKALHLLFQMTYSGQQPDWFTISSLLLACAHLKSLQYGK 471
Query: 353 EIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHG 412
EI Y++ NGLE++ V TSL+ + CG+ + A+ +F+R+ DK+L W+AMI+GY+ +G
Sbjct: 472 EIHGYVLRNGLETDFFVGTSLLSHYIHCGKASSARVLFDRMKDKNLVSWNAMISGYSQNG 531
Query: 413 MGDQALNLFYKMQHVEGLKPDAVVYTSILSACSH 446
+ ++L LF K EG++ + S+ ACS
Sbjct: 532 LPYESLALFRK-SLSEGIQSHEIAIVSVFGACSQ 564
Score = 202 bits (513), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 129/421 (30%), Positives = 229/421 (54%), Gaps = 14/421 (3%)
Query: 35 LVLKACANINSIWDGKRVHSHVLK-VGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPV 93
L+L+AC N I G+R+H V ++ D + T LI MY+ C + SR V D M
Sbjct: 48 LLLQACGNQKDIETGRRLHKFVSDSTHYRNDYVLNTRLIKMYAMCGSPLDSRLVFDNMET 107
Query: 94 RLRSVVSWNSIISAHSRACLNDEAILVLKEMWV-LGLELSASTFVSVVSGC----SFRQG 148
++++ WN+++S ++R L + + V ++ + TF SV+ C R G
Sbjct: 108 --KNLIQWNALVSGYTRNGLYGDVVKVFMDLVSDTDFQPDNFTFPSVIKACGGILDVRLG 165
Query: 149 ISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVN 208
+H V K+GL+ ++ + N+++ MY K G V+EA +FD + ET++VSW ++I +
Sbjct: 166 EVIHGMVIKMGLV-LDVFVGNALVGMYGKCGAVDEAMKVFDFMPETNLVSWNSMICAFSE 224
Query: 209 VGNVNEAFGLCNQM-RRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDP 267
G ++F L +M + PD+V + ++ CA G + + + +H L +K G + E
Sbjct: 225 NGFSRDSFDLLMEMLGEEGLLPDVVTVVTILPVCAGEGEVDIGMGIHGLAVKLGLSEEVM 284
Query: 268 LDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFK--RLLK 325
++N +V MY+KCG L A+ F K+V W +MI ++ G +EA NL + ++
Sbjct: 285 VNNAMVYMYSKCGYLNEAQMSFVKNNNKNVVSWNTMISAFSLEGDVNEAFNLLQEMQIQG 344
Query: 326 TSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINK 385
++ NE T+ L AC + L KE+ Y + + + ++ + I ++KCG +N
Sbjct: 345 EEMKANEVTILNVLPACLDKLQLRSLKELHGYSFRHCFQ-HVELSNAFILAYAKCGALNS 403
Query: 386 AKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACS 445
A++VF + DK ++ W+A+I G+A +G +AL+L ++M + G +PD +S+L AC+
Sbjct: 404 AEKVFHGIGDKTVSSWNALIGGHAQNGDPRKALHLLFQMTY-SGQQPDWFTISSLLLACA 462
Query: 446 H 446
H
Sbjct: 463 H 463
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 93/346 (26%), Positives = 172/346 (49%), Gaps = 16/346 (4%)
Query: 104 IISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGLLNN 163
+I +HS+ + A + L+ +GL L A + G +H V N
Sbjct: 27 LIQSHSQ----NAAFISLQAKEAIGLLLQACG-----NQKDIETGRRLHKFVSDSTHYRN 77
Query: 164 EIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVN---VGNVNEAFGLCN 220
+ L ++ MYA G ++R +FD + +++ W ++ GY G+V + F +
Sbjct: 78 DYVLNTRLIKMYAMCGSPLDSRLVFDNMETKNLIQWNALVSGYTRNGLYGDVVKVF--MD 135
Query: 221 QMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCG 280
+ PD F ++I C + ++ L +H +++K G + + N LV MY KCG
Sbjct: 136 LVSDTDFQPDNFTFPSVIKACGGILDVRLGEVIHGMVIKMGLVLDVFVGNALVGMYGKCG 195
Query: 281 DLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLL-KTSVRPNEATLATTL 339
++ A +VFD + E ++ W SMI +++ G+ ++ +L +L + + P+ T+ T L
Sbjct: 196 AVDEAMKVFDFMPETNLVSWNSMICAFSENGFSRDSFDLLMEMLGEEGLLPDVVTVVTIL 255
Query: 340 SACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLA 399
CA G + G I V GL V ++++M+SKCG +N+A+ F + +K++
Sbjct: 256 PVCAGEGEVDIGMGIHGLAVKLGLSEEVMVNNAMVYMYSKCGYLNEAQMSFVKNNNKNVV 315
Query: 400 VWSAMINGYAIHGMGDQALNLFYKMQ-HVEGLKPDAVVYTSILSAC 444
W+ MI+ +++ G ++A NL +MQ E +K + V ++L AC
Sbjct: 316 SWNTMISAFSLEGDVNEAFNLLQEMQIQGEEMKANEVTILNVLPAC 361
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 114/220 (51%), Gaps = 2/220 (0%)
Query: 237 LILGCAQVGNLFLALSMHSLLLKSG-YNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEK 295
L+ C ++ +H + S Y N+ L+ L+ MY CG +R VFD + K
Sbjct: 49 LLQACGNQKDIETGRRLHKFVSDSTHYRNDYVLNTRLIKMYAMCGSPLDSRLVFDNMETK 108
Query: 296 SVFLWTSMIGGYAQLGYPSEAVNLFKRLL-KTSVRPNEATLATTLSACAELGSLSKGKEI 354
++ W +++ GY + G + V +F L+ T +P+ T + + AC + + G+ I
Sbjct: 109 NLIQWNALVSGYTRNGLYGDVVKVFMDLVSDTDFQPDNFTFPSVIKACGGILDVRLGEVI 168
Query: 355 EEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMG 414
++ GL + V +L+ M+ KCG +++A +VF+ +P+ +L W++MI ++ +G
Sbjct: 169 HGMVIKMGLVLDVFVGNALVGMYGKCGAVDEAMKVFDFMPETNLVSWNSMICAFSENGFS 228
Query: 415 DQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGL 454
+ +L +M EGL PD V +IL C+ G VD G+
Sbjct: 229 RDSFDLLMEMLGEEGLLPDVVTVVTILPVCAGEGEVDIGM 268
>gi|449451892|ref|XP_004143694.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g12770-like [Cucumis sativus]
Length = 673
Score = 365 bits (936), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 202/575 (35%), Positives = 329/575 (57%), Gaps = 9/575 (1%)
Query: 51 RVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSR 110
+V+ ++ G + F+ I+ D + K E V ++ WN+II +++
Sbjct: 20 QVYVQLIVSGLHKCRFLMIKFINACLHFGDVNYAHKAFRE--VSEPDILLWNAIIKGYTQ 77
Query: 111 ACLNDEAILVLKEMWVLGLELSASTFVSVVSGCSFRQ----GISMHCCVYKLGLLNNEIP 166
+ D I + +M + + + TF+ V+ C G +H +K G +N +
Sbjct: 78 KNIVDAPIRMYMDMQISQVHPNCFTFLYVLKACGGTSVEGIGKQIHGQTFKYGFGSN-VF 136
Query: 167 LANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMS 226
+ NS++SMYAKFG+++ AR +FD++ + ++VSWT+II GYV G+ EA + +MR+ +
Sbjct: 137 VQNSLVSMYAKFGQISYARIVFDKLHDRTVVSWTSIISGYVQNGDPMEALNVFKEMRQCN 196
Query: 227 VTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELAR 286
V PD + ++++ V +L S+H L+ K G E + L +MY K G +E+AR
Sbjct: 197 VKPDWIALVSVMTAYTNVEDLGQGKSIHGLVTKLGLEFEPDIVISLTTMYAKRGLVEVAR 256
Query: 287 RVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELG 346
F+ + + ++ LW +MI GYA GY EA+ LF+ ++ ++R + T+ + + A A++G
Sbjct: 257 FFFNRMEKPNLILWNAMISGYANNGYGEEAIKLFREMITKNIRVDSITMRSAVLASAQVG 316
Query: 347 SLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMIN 406
SL + ++ YI + + V T LI M++KCG I A+ VF+RV DKD+ +WS MI
Sbjct: 317 SLELARWLDGYISKSEYRDDTFVNTGLIDMYAKCGSIYLARCVFDRVADKDVVLWSVMIM 376
Query: 407 GYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGI 466
GY +HG G +A+ L+ +M+ G+ P+ + +L+AC +SG+V +G F M + GI
Sbjct: 377 GYGLHGHGQEAICLYNEMKQA-GVCPNDGTFIGLLTACKNSGLVKEGWELFHLM-PDHGI 434
Query: 467 EPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAK 526
EP +HY C+VDLLGRAG + A I MP++ VW LLSAC H V LGE AA+
Sbjct: 435 EPHHQHYSCVVDLLGRAGYLNQAYDFIMSMPIKPGVSVWGALLSACKIHRKVRLGEIAAE 494
Query: 527 NLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFV 586
L L+P +TG+Y+ ++NL+ SA +W A R +M + L K+ G S +EI+G+++ F
Sbjct: 495 QLFILDPYNTGHYVQLSNLYASAHLWTRVANVRLMMTQKGLNKDLGHSSIEINGNLETFQ 554
Query: 587 AGDRSHHLSVDIRKTLKELHIKLLEAGYIAEADIV 621
GDRSH S +I + L L +L AGY+ + V
Sbjct: 555 VGDRSHPKSKEIFEELDRLEKRLKAAGYVPHMESV 589
Score = 221 bits (564), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 139/416 (33%), Positives = 218/416 (52%), Gaps = 8/416 (1%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+I+ T + + Y M + VH N FTF VLKAC + GK++H K G
Sbjct: 71 IIKGYTQKNIVDAPIRMYMDMQISQVHPNCFTFLYVLKACGGTSVEGIGKQIHGQTFKYG 130
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F + FVQ L+ MY+K +R V D++ R+VVSW SIIS + + EA+ V
Sbjct: 131 FGSNVFVQNSLVSMYAKFGQISYARIVFDKL--HDRTVVSWTSIISGYVQNGDPMEALNV 188
Query: 121 LKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
KEM ++ VSV++ + QG S+H V KLG L E + S+ +MYA
Sbjct: 189 FKEMRQCNVKPDWIALVSVMTAYTNVEDLGQGKSIHGLVTKLG-LEFEPDIVISLTTMYA 247
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K G V AR F+ + + +++ W +I GY N G EA L +M ++ D + +
Sbjct: 248 KRGLVEVARFFFNRMEKPNLILWNAMISGYANNGYGEEAIKLFREMITKNIRVDSITMRS 307
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
+L AQVG+L LA + + KS Y ++ ++ L+ MY KCG + LAR VFD V +K
Sbjct: 308 AVLASAQVGSLELARWLDGYISKSEYRDDTFVNTGLIDMYAKCGSIYLARCVFDRVADKD 367
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEE 356
V LW+ MI GY G+ EA+ L+ + + V PN+ T L+AC G + +G E+
Sbjct: 368 VVLWSVMIMGYGLHGHGQEAICLYNEMKQAGVCPNDGTFIGLLTACKNSGLVKEGWELFH 427
Query: 357 YIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKD-LAVWSAMINGYAIH 411
+ +G+E + Q + ++ + + G +N+A + +P K ++VW A+++ IH
Sbjct: 428 LMPDHGIEPHHQHYSCVVDLLGRAGYLNQAYDFIMSMPIKPGVSVWGALLSACKIH 483
>gi|224140549|ref|XP_002323645.1| predicted protein [Populus trichocarpa]
gi|222868275|gb|EEF05406.1| predicted protein [Populus trichocarpa]
Length = 682
Score = 365 bits (936), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 205/579 (35%), Positives = 320/579 (55%), Gaps = 14/579 (2%)
Query: 50 KRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHS 109
K +H+ +L++G +D ++ ++ + S ++LD+ + ++ +N++I
Sbjct: 27 KHIHAALLRLGLDEDTYLLNKVLRFSFNFGNTNYSFRILDQ--TKEPNIFLFNTMIRG-- 82
Query: 110 RACLND---EAILVLKEMWVLGLELSASTFVSVVSGCSF----RQGISMHCCVYKLGLLN 162
LND E+I + M GL + TF V+ C+ G+ MH V K G
Sbjct: 83 -LVLNDCFQESIEIYHSMRKEGLSPDSFTFPFVLKACARVLDSELGVKMHSLVVKAGCEA 141
Query: 163 NEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQM 222
+ + S++++Y K G ++ A +FD+I + + SWT I GYV VG EA + ++
Sbjct: 142 DAF-VKISLINLYTKCGFIDNAFKVFDDIPDKNFASWTATISGYVGVGKCREAIDMFRRL 200
Query: 223 RRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDL 282
M + PD + ++ C + G+L + + ++G + LV Y KCG++
Sbjct: 201 LEMGLRPDSFSLVEVLSACKRTGDLRSGEWIDEYITENGMVRNVFVATALVDFYGKCGNM 260
Query: 283 ELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSAC 342
E AR VFD +LEK++ W+SMI GYA G P EA++LF ++L ++P+ + L +C
Sbjct: 261 ERARSVFDGMLEKNIVSWSSMIQGYASNGLPKEALDLFFKMLNEGLKPDCYAMVGVLCSC 320
Query: 343 AELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWS 402
A LG+L G I N N + T+LI M++KCGR+++A EVF + KD VW+
Sbjct: 321 ARLGALELGDWASNLINGNEFLDNSVLGTALIDMYAKCGRMDRAWEVFRGMRKKDRVVWN 380
Query: 403 AMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQS 462
A I+G A+ G AL LF +M+ G+KPD + +L AC+H+G+V++G +F SM+
Sbjct: 381 AAISGLAMSGHVKDALGLFGQMEK-SGIKPDRNTFVGLLCACTHAGLVEEGRRYFNSMEC 439
Query: 463 NFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGE 522
F + P IEHY C+VDLLGRAG D A + I MP+E A VW LL C H + +L E
Sbjct: 440 VFTLTPEIEHYGCMVDLLGRAGCLDEAHQLIKSMPMEANAIVWGALLGGCRLHRDTQLVE 499
Query: 523 YAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSV 582
K L+ L P +GNY+L++N++ ++ W+EAA R +M +R + K PG+S +E+DG V
Sbjct: 500 VVLKKLIALEPWHSGNYVLLSNIYAASHKWEEAAKIRSIMSERGVKKIPGYSWIEVDGVV 559
Query: 583 QVFVAGDRSHHLSVDIRKTLKELHIKLLEAGYIAEADIV 621
F+ GD SH LS I L EL L AGY+ D V
Sbjct: 560 HQFLVGDTSHPLSEKIYAKLGELAKDLKAAGYVPTTDHV 598
Score = 205 bits (522), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 125/422 (29%), Positives = 221/422 (52%), Gaps = 19/422 (4%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MIR N F+E++ Y SM + G+ +SFTFP VLKACA + G ++HS V+K G
Sbjct: 79 MIRGLVLNDCFQESIEIYHSMRKEGLSPDSFTFPFVLKACARVLDSELGVKMHSLVVKAG 138
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+ DAFV+ LI++Y+KC ++ KV D++P ++ SW + IS + EAI +
Sbjct: 139 CEADAFVKISLINLYTKCGFIDNAFKVFDDIPD--KNFASWTATISGYVGVGKCREAIDM 196
Query: 121 LKEMWVLGLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
+ + +GL + + V V+S C R G + + + G++ N + +A +++ Y
Sbjct: 197 FRRLLEMGLRPDSFSLVEVLSACKRTGDLRSGEWIDEYITENGMVRN-VFVATALVDFYG 255
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K G + ARS+FD + E +IVSW+++I GY + G EA L +M + PD +
Sbjct: 256 KCGNMERARSVFDGMLEKNIVSWSSMIQGYASNGLPKEALDLFFKMLNEGLKPDCYAMVG 315
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
++ CA++G L L +L+ + + + L L+ MY KCG ++ A VF + +K
Sbjct: 316 VLCSCARLGALELGDWASNLINGNEFLDNSVLGTALIDMYAKCGRMDRAWEVFRGMRKKD 375
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEE 356
+W + I G A G+ +A+ LF ++ K+ ++P+ T L AC G + +G+
Sbjct: 376 RVVWNAAISGLAMSGHVKDALGLFGQMEKSGIKPDRNTFVGLLCACTHAGLVEEGRR--- 432
Query: 357 YIVLNGLESNRQVQTSLIH------MFSKCGRINKAKEVFERVP-DKDLAVWSAMINGYA 409
N +E + + H + + G +++A ++ + +P + + VW A++ G
Sbjct: 433 --YFNSMECVFTLTPEIEHYGCMVDLLGRAGCLDEAHQLIKSMPMEANAIVWGALLGGCR 490
Query: 410 IH 411
+H
Sbjct: 491 LH 492
>gi|449492963|ref|XP_004159154.1| PREDICTED: uncharacterized protein LOC101226880 [Cucumis sativus]
Length = 1725
Score = 364 bits (935), Expect = 6e-98, Method: Compositional matrix adjust.
Identities = 196/532 (36%), Positives = 310/532 (58%), Gaps = 15/532 (2%)
Query: 97 SVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCS----FRQGISMH 152
+V SWNS+I+ +R + EA+ + LGL + S+F + CS G H
Sbjct: 1106 NVHSWNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKSCSALCDLVSGRMSH 1165
Query: 153 CCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNV 212
+ G ++ ++++++ MY+K G++ +AR++FDEI ++VSWT++I GYV
Sbjct: 1166 QQAFVFGF-ETDLFVSSALIDMYSKCGQLKDARALFDEIPLRNVVSWTSMITGYVQNEQA 1224
Query: 213 NEAFGLCNQMRRM--------SVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNN 264
+ A L +V D VV ++++ C++V + +H ++K G++
Sbjct: 1225 DNALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITEGVHGFVVKKGFDG 1284
Query: 265 EDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLL 324
+ N L+ Y KCG ++++VFD + EK W SMI YAQ G EA+ +F ++
Sbjct: 1285 SIGVGNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVYAQSGLSGEALEVFHGMV 1344
Query: 325 K-TSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRI 383
+ VR N TL+ L ACA G+L GK I + ++ LE N V TS+I M+ KCGR+
Sbjct: 1345 RHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEYNVCVGTSIIDMYCKCGRV 1404
Query: 384 NKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSA 443
AK+ F+R+ +K++ W+AM+ GY +HG +AL++FYKM G+KP+ + + S+L+A
Sbjct: 1405 EMAKKTFDRMKEKNVKSWTAMVAGYGMHGRAKEALDIFYKMVRA-GVKPNYITFVSVLAA 1463
Query: 444 CSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQ 503
CSH+G+V++G +F +M+ + IEP IEHY C+VDL GRAG + A I M ++
Sbjct: 1464 CSHAGLVEEGWHWFNAMKHKYDIEPGIEHYGCMVDLFGRAGCLNEAYNLIKRMKMKPDFV 1523
Query: 504 VWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMD 563
VW LL AC H NV+LGE AA+ L L+P + G Y+L++NL+ AG W + R LM
Sbjct: 1524 VWGSLLGACRIHKNVDLGEIAAQKLFELDPDNCGYYVLLSNLYADAGRWADVERMRMLMK 1583
Query: 564 DRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKELHIKLLEAGYI 615
+R+L K PG+S VE+ G V VF+ GD+ H I K L++L ++L + GY+
Sbjct: 1584 NRQLVKPPGFSLVELKGRVHVFLVGDKEHPHHEMIYKYLEKLTLELQKIGYV 1635
Score = 224 bits (572), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 124/384 (32%), Positives = 197/384 (51%), Gaps = 33/384 (8%)
Query: 144 SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTII 203
+F+ +H + + GL N+++ L ++ +Y+ G++ A +F +I +W II
Sbjct: 39 NFKHLRQIHAKIIRSGLSNDQL-LTRKLIHLYSTHGRIAYAILLFYQIQNPCTFTWNLII 97
Query: 204 GGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYN 263
G +A L M + D F +I C ++ L +H L+K G++
Sbjct: 98 RANTINGLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYGFS 157
Query: 264 NEDPLDNLLVSMYTKCG-------------------------------DLELARRVFDAV 292
+ + N L+ Y KCG DL+ ARR+FD +
Sbjct: 158 GDVFVQNNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEARRIFDEI 217
Query: 293 LEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGK 352
K+V WT+MI GY + P EA+ LFKR+ ++ PNE T+ + + AC E+G L+ G+
Sbjct: 218 PSKNVVSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMGILTLGR 277
Query: 353 EIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHG 412
I +Y + N +E + T+LI M+SKCG I A EVFE +P K L W++MI +HG
Sbjct: 278 GIHDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPTWNSMITSLGVHG 337
Query: 413 MGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEH 472
+G +ALNLF +M+ V +KPDA+ + +L AC H V +G ++F M ++GI P EH
Sbjct: 338 LGQEALNLFSEMERVN-VKPDAITFIGVLCACVHIKNVKEGCAYFTRMTQHYGIAPIPEH 396
Query: 473 YLCLVDLLGRAGRFDLALKTIHEM 496
Y C+ +L R+ D A K+ E+
Sbjct: 397 YECMTELYARSNNLDEAFKSTKEV 420
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 142/500 (28%), Positives = 241/500 (48%), Gaps = 54/500 (10%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+I + G E L +SS+ + G+ +FP +K+C+ + + G+ H G
Sbjct: 1113 VIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKSCSALCDLVSGRMSHQQAFVFG 1172
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F+ D FV + LIDMYSKC +R + DE+P LR+VVSW S+I+ + + D A+L+
Sbjct: 1173 FETDLFVSSALIDMYSKCGQLKDARALFDEIP--LRNVVSWTSMITGYVQNEQADNALLL 1230
Query: 121 LKEMWVLGLE--------LSASTFVSVVSGCSFRQGISM----HCCVYKLGLLNNEIPLA 168
K+ E L + VSV+S CS G + H V K G + I +
Sbjct: 1231 FKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITEGVHGFVVKKG-FDGSIGVG 1289
Query: 169 NSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQM-RRMSV 227
N++M YAK G+ ++ +FD + E +SW ++I Y G EA + + M R + V
Sbjct: 1290 NTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVYAQSGLSGEALEVFHGMVRHVGV 1349
Query: 228 TPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARR 287
+ V ++L CA G L +H ++K + ++ MY KCG +E+A++
Sbjct: 1350 RYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEYNVCVGTSIIDMYCKCGRVEMAKK 1409
Query: 288 VFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGS 347
FD + EK+V WT+M+ GY G EA+++F ++++ V+PN T + L+AC+ G
Sbjct: 1410 TFDRMKEKNVKSWTAMVAGYGMHGRAKEALDIFYKMVRAGVKPNYITFVSVLAACSHAGL 1469
Query: 348 LSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMING 407
+ +G + N ++ ++ + H + M++
Sbjct: 1470 VEEG-----WHWFNAMKHKYDIEPGIEH-------------------------YGCMVDL 1499
Query: 408 YAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIE 467
+ G ++A NL +M+ +KPD VV+ S+L AC VD G + Q F ++
Sbjct: 1500 FGRAGCLNEAYNLIKRMK----MKPDFVVWGSLLGACRIHKNVDLGEI---AAQKLFELD 1552
Query: 468 P-SIEHYLCLVDLLGRAGRF 486
P + +Y+ L +L AGR+
Sbjct: 1553 PDNCGYYVLLSNLYADAGRW 1572
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 90/346 (26%), Positives = 172/346 (49%), Gaps = 18/346 (5%)
Query: 182 NEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGC 241
N A + + ++++ SW ++I G+ EA + +R++ + P F I C
Sbjct: 1093 NLATWFYKYVDKSNVHSWNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKSC 1152
Query: 242 AQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWT 301
+ + +L H G+ + + + L+ MY+KCG L+ AR +FD + ++V WT
Sbjct: 1153 SALCDLVSGRMSHQQAFVFGFETDLFVSSALIDMYSKCGQLKDARALFDEIPLRNVVSWT 1212
Query: 302 SMIGGYAQLGYPSEAVNLFKRLLK--------TSVRPNEATLATTLSACAELGSLSKGKE 353
SMI GY Q A+ LFK L+ +V + + + LSAC+ + +
Sbjct: 1213 SMITGYVQNEQADNALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITEG 1272
Query: 354 IEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGM 413
+ ++V G + + V +L+ ++KCG+ +K+VF+ + +KD W++MI YA G+
Sbjct: 1273 VHGFVVKKGFDGSIGVGNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVYAQSGL 1332
Query: 414 GDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHY 473
+AL +F+ M G++ +AV +++L AC+H+G + G + I+ +E+
Sbjct: 1333 SGEALEVFHGMVRHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQV-----IKMDLEYN 1387
Query: 474 LC----LVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKH 515
+C ++D+ + GR ++A KT M E + W +++ H
Sbjct: 1388 VCVGTSIIDMYCKCGRVEMAKKTFDRMK-EKNVKSWTAMVAGYGMH 1432
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 80/281 (28%), Positives = 138/281 (49%), Gaps = 36/281 (12%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+IR +T NG E+ L Y +M+ G+ + FTFP V+KAC N SI GK VH ++K G
Sbjct: 96 IIRANTINGLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYG 155
Query: 61 FQQDAFVQTGLIDMYSK-------------------------------CSDFVSSRKVLD 89
F D FVQ LID Y K C D +R++ D
Sbjct: 156 FSGDVFVQNNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEARRIFD 215
Query: 90 EMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCSFRQGI 149
E+P ++VVSW ++I+ + R +EA+ + K M + + T VS++ C+ +
Sbjct: 216 EIPS--KNVVSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMGIL 273
Query: 150 SMHCCVYKLGLLNN---EIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGY 206
++ ++ + N + L +++ MY+K G + +A +F+ + S+ +W ++I
Sbjct: 274 TLGRGIHDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPTWNSMITSL 333
Query: 207 VNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNL 247
G EA L ++M R++V PD + F+ ++ C + N+
Sbjct: 334 GVHGLGQEALNLFSEMERVNVKPDAITFIGVLCACVHIKNV 374
Score = 132 bits (332), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 91/352 (25%), Positives = 161/352 (45%), Gaps = 41/352 (11%)
Query: 35 LVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVR 94
+L+ C N + +++H+ +++ G D + LI +YS + +L ++
Sbjct: 32 FLLQNCKNFKHL---RQIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYA--ILLFYQIQ 86
Query: 95 LRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGC----SFRQGIS 150
+WN II A++ L+++A+++ K M G+ TF V+ C S G
Sbjct: 87 NPCTFTWNLIIRANTINGLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKV 146
Query: 151 MHCCVYKLGLLNNEIPLANSVMSMYAK-------------------------------FG 179
+H + K G + ++ + N+++ Y K G
Sbjct: 147 VHGSLIKYG-FSGDVFVQNNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCG 205
Query: 180 KVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLIL 239
+ EAR IFDEI ++VSWT +I GY+ EA L +M+ ++ P+ ++LI
Sbjct: 206 DLQEARRIFDEIPSKNVVSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIK 265
Query: 240 GCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFL 299
C ++G L L +H +K+ L L+ MY+KCG ++ A VF+ + KS+
Sbjct: 266 ACTEMGILTLGRGIHDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPT 325
Query: 300 WTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKG 351
W SMI G EA+NLF + + +V+P+ T L AC + ++ +G
Sbjct: 326 WNSMITSLGVHGLGQEALNLFSEMERVNVKPDAITFIGVLCACVHIKNVKEG 377
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 92/196 (46%), Gaps = 6/196 (3%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI N EE L + M + N +T ++KAC + + G+ +H + +K
Sbjct: 228 MINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMGILTLGRGIHDYAIKNC 287
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+ ++ T LIDMYSKC + +V + MP +S+ +WNS+I++ L EA+ +
Sbjct: 288 IEIGVYLGTALIDMYSKCGSIKDAIEVFETMP--RKSLPTWNSMITSLGVHGLGQEALNL 345
Query: 121 LKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGLLN---NEIPLANSVMS-MYA 176
EM + ++ A TF+ V+ C + + C + + IP M+ +YA
Sbjct: 346 FSEMERVNVKPDAITFIGVLCACVHIKNVKEGCAYFTRMTQHYGIAPIPEHYECMTELYA 405
Query: 177 KFGKVNEARSIFDEIG 192
+ ++EA E+G
Sbjct: 406 RSNNLDEAFKSTKEVG 421
>gi|359483488|ref|XP_002273710.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Vitis vinifera]
Length = 933
Score = 364 bits (935), Expect = 6e-98, Method: Compositional matrix adjust.
Identities = 196/612 (32%), Positives = 339/612 (55%), Gaps = 8/612 (1%)
Query: 13 ETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLI 72
E + + M+ +G+ N F+ ++ AC + GK +H +++K+G+ D F L+
Sbjct: 241 EAVGLFYEMVLSGIKPNEFSLSSMVNACTGLRDSSRGKIIHGYLIKLGYDWDPFSANALV 300
Query: 73 DMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELS 132
DMY+K D + V ++ ++ +VSWN++I+ +++A+ +L +M G+ +
Sbjct: 301 DMYAKVGDLADAISVFEK--IKQPDIVSWNAVIAGCVLHEHHEQALELLGQMKRSGICPN 358
Query: 133 ASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIF 188
T S + C+ G +H + K+ + +++ ++ ++ MY+K + +AR F
Sbjct: 359 IFTLSSALKACAGMGLKELGRQLHSSLMKMDM-ESDLFVSVGLVDMYSKCDLLEDARMAF 417
Query: 189 DEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLF 248
+ + E +++W II GY EA L +M + + + ++ A + +
Sbjct: 418 NLLPEKDLIAWNAIISGYSQYWEDMEALSLFVEMHKEGIGFNQTTLSTILKSTAGLQVVH 477
Query: 249 LALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYA 308
+ +H L +KSG++++ + N L+ Y KC +E A R+F+ + +TSMI YA
Sbjct: 478 VCRQVHGLSVKSGFHSDIYVVNSLIDSYGKCSHVEDAERIFEECTIGDLVSFTSMITAYA 537
Query: 309 QLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQ 368
Q G EA+ LF + ++P+ ++ L+ACA L + +GK++ +I+ G +
Sbjct: 538 QYGQGEEALKLFLEMQDMELKPDRFVCSSLLNACANLSAFEQGKQLHVHILKYGFVLDIF 597
Query: 369 VQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVE 428
SL++M++KCG I+ A F + ++ + WSAMI G A HG G QAL LF +M E
Sbjct: 598 AGNSLVNMYAKCGSIDDAGRAFSELTERGIVSWSAMIGGLAQHGHGRQALQLFNQMLK-E 656
Query: 429 GLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDL 488
G+ P+ + S+L AC+H+G+V + +F+SM+ FG +P EHY C++DLLGRAG+ +
Sbjct: 657 GVSPNHITLVSVLGACNHAGLVTEAKLYFESMEELFGFKPMQEHYACMIDLLGRAGKINE 716
Query: 489 ALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTS 548
A++ +++MP E A VW LL A H +VELG AA+ L L P +G ++L+AN++ S
Sbjct: 717 AVELVNKMPFEANASVWGALLGAARIHKDVELGRRAAEMLFILEPEKSGTHVLLANIYAS 776
Query: 549 AGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKELHIK 608
AG W+ A R LM D ++ KEPG S +E+ V F+ GDRSH+ S +I L EL
Sbjct: 777 AGKWENVAEVRRLMRDSKVKKEPGMSWIEVKDKVYTFLVGDRSHYRSQEIYAKLDELSDL 836
Query: 609 LLEAGYIAEADI 620
+ +AGY+ +I
Sbjct: 837 MDKAGYVPMVEI 848
Score = 256 bits (654), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 166/519 (31%), Positives = 274/519 (52%), Gaps = 10/519 (1%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+I NG L + M GV N FTF VLKAC+ + + GK+VH V+ G
Sbjct: 128 LISGYAQNGLGGGALMAFHEMHLLGVKCNEFTFSSVLKACSIVKDLRIGKQVHGVVVVSG 187
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F+ D FV L+ MY+KC +F+ S+++ DE+P R+VVSWN++ S + + EA+ +
Sbjct: 188 FEGDVFVANTLVVMYAKCDEFLDSKRLFDEIPE--RNVVSWNALFSCYVQIDFCGEAVGL 245
Query: 121 LKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
EM + G++ + + S+V+ C+ +G +H + KLG + AN+++ MYA
Sbjct: 246 FYEMVLSGIKPNEFSLSSMVNACTGLRDSSRGKIIHGYLIKLGYDWDPFS-ANALVDMYA 304
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K G + +A S+F++I + IVSW +I G V + +A L QM+R + P++ +
Sbjct: 305 KVGDLADAISVFEKIKQPDIVSWNAVIAGCVLHEHHEQALELLGQMKRSGICPNIFTLSS 364
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
+ CA +G L +HS L+K ++ + LV MY+KC LE AR F+ + EK
Sbjct: 365 ALKACAGMGLKELGRQLHSSLMKMDMESDLFVSVGLVDMYSKCDLLEDARMAFNLLPEKD 424
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEE 356
+ W ++I GY+Q EA++LF + K + N+ TL+T L + A L + +++
Sbjct: 425 LIAWNAIISGYSQYWEDMEALSLFVEMHKEGIGFNQTTLSTILKSTAGLQVVHVCRQVHG 484
Query: 357 YIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQ 416
V +G S+ V SLI + KC + A+ +FE DL +++MI YA +G G++
Sbjct: 485 LSVKSGFHSDIYVVNSLIDSYGKCSHVEDAERIFEECTIGDLVSFTSMITAYAQYGQGEE 544
Query: 417 ALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCL 476
AL LF +MQ +E LKPD V +S+L+AC++ + G + +G I L
Sbjct: 545 ALKLFLEMQDME-LKPDRFVCSSLLNACANLSAFEQGKQLHVHIL-KYGFVLDIFAGNSL 602
Query: 477 VDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKH 515
V++ + G D A + E+ E W+ ++ +H
Sbjct: 603 VNMYAKCGSIDDAGRAFSEL-TERGIVSWSAMIGGLAQH 640
Score = 219 bits (557), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 133/446 (29%), Positives = 235/446 (52%), Gaps = 23/446 (5%)
Query: 2 IRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGF 61
I N + G+F T +YS +L C S+ G ++H+H+ K G
Sbjct: 43 ILNLIDKGNFTPTSVSYSKLLSQ---------------CCTTKSLRPGLQIHAHITKSGL 87
Query: 62 QQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVL 121
D ++ LI++YSKC +F +RK++DE +VSW+++IS +++ L A++
Sbjct: 88 SDDPSIRNHLINLYSKCRNFGYARKLVDESSEP--DLVSWSALISGYAQNGLGGGALMAF 145
Query: 122 KEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAK 177
EM +LG++ + TF SV+ CS R G +H V G ++ +AN+++ MYAK
Sbjct: 146 HEMHLLGVKCNEFTFSSVLKACSIVKDLRIGKQVHGVVVVSGF-EGDVFVANTLVVMYAK 204
Query: 178 FGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNL 237
+ +++ +FDEI E ++VSW + YV + EA GL +M + P+ ++
Sbjct: 205 CDEFLDSKRLFDEIPERNVVSWNALFSCYVQIDFCGEAVGLFYEMVLSGIKPNEFSLSSM 264
Query: 238 ILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSV 297
+ C + + +H L+K GY+ + N LV MY K GDL A VF+ + + +
Sbjct: 265 VNACTGLRDSSRGKIIHGYLIKLGYDWDPFSANALVDMYAKVGDLADAISVFEKIKQPDI 324
Query: 298 FLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEY 357
W ++I G + +A+ L ++ ++ + PN TL++ L ACA +G G+++
Sbjct: 325 VSWNAVIAGCVLHEHHEQALELLGQMKRSGICPNIFTLSSALKACAGMGLKELGRQLHSS 384
Query: 358 IVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQA 417
++ +ES+ V L+ M+SKC + A+ F +P+KDL W+A+I+GY+ + +A
Sbjct: 385 LMKMDMESDLFVSVGLVDMYSKCDLLEDARMAFNLLPEKDLIAWNAIISGYSQYWEDMEA 444
Query: 418 LNLFYKMQHVEGLKPDAVVYTSILSA 443
L+LF +M H EG+ + ++IL +
Sbjct: 445 LSLFVEM-HKEGIGFNQTTLSTILKS 469
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 104/384 (27%), Positives = 200/384 (52%), Gaps = 8/384 (2%)
Query: 132 SASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSI 187
++ ++ ++S C S R G+ +H + K GL +++ + N ++++Y+K AR +
Sbjct: 55 TSVSYSKLLSQCCTTKSLRPGLQIHAHITKSGL-SDDPSIRNHLINLYSKCRNFGYARKL 113
Query: 188 FDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNL 247
DE E +VSW+ +I GY G A ++M + V + F +++ C+ V +L
Sbjct: 114 VDESSEPDLVSWSALISGYAQNGLGGGALMAFHEMHLLGVKCNEFTFSSVLKACSIVKDL 173
Query: 248 FLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGY 307
+ +H +++ SG+ + + N LV MY KC + ++R+FD + E++V W ++ Y
Sbjct: 174 RIGKQVHGVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFDEIPERNVVSWNALFSCY 233
Query: 308 AQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNR 367
Q+ + EAV LF ++ + ++PNE +L++ ++AC L S+GK I Y++ G + +
Sbjct: 234 VQIDFCGEAVGLFYEMVLSGIKPNEFSLSSMVNACTGLRDSSRGKIIHGYLIKLGYDWDP 293
Query: 368 QVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHV 427
+L+ M++K G + A VFE++ D+ W+A+I G +H +QAL L +M+
Sbjct: 294 FSANALVDMYAKVGDLADAISVFEKIKQPDIVSWNAVIAGCVLHEHHEQALELLGQMKR- 352
Query: 428 EGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFD 487
G+ P+ +S L AC+ G+ + G S+ +E + + LVD+ + +
Sbjct: 353 SGICPNIFTLSSALKACAGMGLKELGRQLHSSLM-KMDMESDLFVSVGLVDMYSKCDLLE 411
Query: 488 LALKTIHEMPVEVQAQVWAPLLSA 511
A + +P E W ++S
Sbjct: 412 DARMAFNLLP-EKDLIAWNAIISG 434
>gi|449455978|ref|XP_004145727.1| PREDICTED: uncharacterized protein LOC101212001 [Cucumis sativus]
Length = 2598
Score = 364 bits (935), Expect = 7e-98, Method: Compositional matrix adjust.
Identities = 196/532 (36%), Positives = 310/532 (58%), Gaps = 15/532 (2%)
Query: 97 SVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCS----FRQGISMH 152
+V SWNS+I+ +R + EA+ + LGL + S+F + CS G H
Sbjct: 1979 NVHSWNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKSCSALCDLVSGRMSH 2038
Query: 153 CCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNV 212
+ G ++ ++++++ MY+K G++ +AR++FDEI ++VSWT++I GYV
Sbjct: 2039 QQAFVFGF-ETDLFVSSALIDMYSKCGQLKDARALFDEIPLRNVVSWTSMITGYVQNEQA 2097
Query: 213 NEAFGLCNQMRRM--------SVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNN 264
+ A L +V D VV ++++ C++V + +H ++K G++
Sbjct: 2098 DNALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITEGVHGFVVKKGFDG 2157
Query: 265 EDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLL 324
+ N L+ Y KCG ++++VFD + EK W SMI YAQ G EA+ +F ++
Sbjct: 2158 SIGVGNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVYAQSGLSGEALEVFHGMV 2217
Query: 325 K-TSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRI 383
+ VR N TL+ L ACA G+L GK I + ++ LE N V TS+I M+ KCGR+
Sbjct: 2218 RHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEYNVCVGTSIIDMYCKCGRV 2277
Query: 384 NKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSA 443
AK+ F+R+ +K++ W+AM+ GY +HG +AL++FYKM G+KP+ + + S+L+A
Sbjct: 2278 EMAKKTFDRMKEKNVKSWTAMVAGYGMHGRAKEALDIFYKMVRA-GVKPNYITFVSVLAA 2336
Query: 444 CSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQ 503
CSH+G+V++G +F +M+ + IEP IEHY C+VDL GRAG + A I M ++
Sbjct: 2337 CSHAGLVEEGWHWFNAMKHKYDIEPGIEHYGCMVDLFGRAGCLNEAYNLIKRMKMKPDFV 2396
Query: 504 VWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMD 563
VW LL AC H NV+LGE AA+ L L+P + G Y+L++NL+ AG W + R LM
Sbjct: 2397 VWGSLLGACRIHKNVDLGEIAAQKLFELDPDNCGYYVLLSNLYADAGRWADVERMRMLMK 2456
Query: 564 DRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKELHIKLLEAGYI 615
+R+L K PG+S VE+ G V VF+ GD+ H I K L++L ++L + GY+
Sbjct: 2457 NRQLVKPPGFSLVELKGRVHVFLVGDKEHPHHEMIYKYLEKLTLELQKIGYV 2508
Score = 224 bits (570), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 124/384 (32%), Positives = 197/384 (51%), Gaps = 33/384 (8%)
Query: 144 SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTII 203
+F+ +H + + GL N+++ L ++ +Y+ G++ A +F +I +W II
Sbjct: 39 NFKHLRQIHAKIIRSGLSNDQL-LTRKLIHLYSTHGRIAYAILLFYQIQNPCTFTWNLII 97
Query: 204 GGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYN 263
G +A L M + D F +I C ++ L +H L+K G++
Sbjct: 98 RANTINGLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYGFS 157
Query: 264 NEDPLDNLLVSMYTKCG-------------------------------DLELARRVFDAV 292
+ + N L+ Y KCG DL+ ARR+FD +
Sbjct: 158 GDVFVQNNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEARRIFDEI 217
Query: 293 LEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGK 352
K+V WT+MI GY + P EA+ LFKR+ ++ PNE T+ + + AC E+G L+ G+
Sbjct: 218 PSKNVVSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMGILTLGR 277
Query: 353 EIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHG 412
I +Y + N +E + T+LI M+SKCG I A EVFE +P K L W++MI +HG
Sbjct: 278 GIHDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPTWNSMITSLGVHG 337
Query: 413 MGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEH 472
+G +ALNLF +M+ V +KPDA+ + +L AC H V +G ++F M ++GI P EH
Sbjct: 338 LGQEALNLFSEMERV-NVKPDAITFIGVLCACVHIKNVKEGCAYFTRMTQHYGIAPIPEH 396
Query: 473 YLCLVDLLGRAGRFDLALKTIHEM 496
Y C+ +L R+ D A K+ E+
Sbjct: 397 YECMTELYARSNNLDEAFKSTKEV 420
Score = 207 bits (527), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 142/500 (28%), Positives = 241/500 (48%), Gaps = 54/500 (10%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+I + G E L +SS+ + G+ +FP +K+C+ + + G+ H G
Sbjct: 1986 VIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKSCSALCDLVSGRMSHQQAFVFG 2045
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F+ D FV + LIDMYSKC +R + DE+P LR+VVSW S+I+ + + D A+L+
Sbjct: 2046 FETDLFVSSALIDMYSKCGQLKDARALFDEIP--LRNVVSWTSMITGYVQNEQADNALLL 2103
Query: 121 LKEMWVLGLE--------LSASTFVSVVSGCSFRQGISM----HCCVYKLGLLNNEIPLA 168
K+ E L + VSV+S CS G + H V K G + I +
Sbjct: 2104 FKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITEGVHGFVVKKG-FDGSIGVG 2162
Query: 169 NSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQM-RRMSV 227
N++M YAK G+ ++ +FD + E +SW ++I Y G EA + + M R + V
Sbjct: 2163 NTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVYAQSGLSGEALEVFHGMVRHVGV 2222
Query: 228 TPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARR 287
+ V ++L CA G L +H ++K + ++ MY KCG +E+A++
Sbjct: 2223 RYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEYNVCVGTSIIDMYCKCGRVEMAKK 2282
Query: 288 VFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGS 347
FD + EK+V WT+M+ GY G EA+++F ++++ V+PN T + L+AC+ G
Sbjct: 2283 TFDRMKEKNVKSWTAMVAGYGMHGRAKEALDIFYKMVRAGVKPNYITFVSVLAACSHAGL 2342
Query: 348 LSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMING 407
+ +G + N ++ ++ + H + M++
Sbjct: 2343 VEEG-----WHWFNAMKHKYDIEPGIEH-------------------------YGCMVDL 2372
Query: 408 YAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIE 467
+ G ++A NL +M+ +KPD VV+ S+L AC VD G + Q F ++
Sbjct: 2373 FGRAGCLNEAYNLIKRMK----MKPDFVVWGSLLGACRIHKNVDLGEI---AAQKLFELD 2425
Query: 468 P-SIEHYLCLVDLLGRAGRF 486
P + +Y+ L +L AGR+
Sbjct: 2426 PDNCGYYVLLSNLYADAGRW 2445
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 90/346 (26%), Positives = 172/346 (49%), Gaps = 18/346 (5%)
Query: 182 NEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGC 241
N A + + ++++ SW ++I G+ EA + +R++ + P F I C
Sbjct: 1966 NLATWFYKYVDKSNVHSWNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKSC 2025
Query: 242 AQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWT 301
+ + +L H G+ + + + L+ MY+KCG L+ AR +FD + ++V WT
Sbjct: 2026 SALCDLVSGRMSHQQAFVFGFETDLFVSSALIDMYSKCGQLKDARALFDEIPLRNVVSWT 2085
Query: 302 SMIGGYAQLGYPSEAVNLFKRLLK--------TSVRPNEATLATTLSACAELGSLSKGKE 353
SMI GY Q A+ LFK L+ +V + + + LSAC+ + +
Sbjct: 2086 SMITGYVQNEQADNALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITEG 2145
Query: 354 IEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGM 413
+ ++V G + + V +L+ ++KCG+ +K+VF+ + +KD W++MI YA G+
Sbjct: 2146 VHGFVVKKGFDGSIGVGNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVYAQSGL 2205
Query: 414 GDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHY 473
+AL +F+ M G++ +AV +++L AC+H+G + G + I+ +E+
Sbjct: 2206 SGEALEVFHGMVRHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQV-----IKMDLEYN 2260
Query: 474 LC----LVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKH 515
+C ++D+ + GR ++A KT M E + W +++ H
Sbjct: 2261 VCVGTSIIDMYCKCGRVEMAKKTFDRMK-EKNVKSWTAMVAGYGMH 2305
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 80/281 (28%), Positives = 138/281 (49%), Gaps = 36/281 (12%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+IR +T NG E+ L Y +M+ G+ + FTFP V+KAC N SI GK VH ++K G
Sbjct: 96 IIRANTINGLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYG 155
Query: 61 FQQDAFVQTGLIDMYSK-------------------------------CSDFVSSRKVLD 89
F D FVQ LID Y K C D +R++ D
Sbjct: 156 FSGDVFVQNNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEARRIFD 215
Query: 90 EMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCSFRQGI 149
E+P ++VVSW ++I+ + R +EA+ + K M + + T VS++ C+ +
Sbjct: 216 EIPS--KNVVSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMGIL 273
Query: 150 SMHCCVYKLGLLNN---EIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGY 206
++ ++ + N + L +++ MY+K G + +A +F+ + S+ +W ++I
Sbjct: 274 TLGRGIHDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPTWNSMITSL 333
Query: 207 VNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNL 247
G EA L ++M R++V PD + F+ ++ C + N+
Sbjct: 334 GVHGLGQEALNLFSEMERVNVKPDAITFIGVLCACVHIKNV 374
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 91/352 (25%), Positives = 161/352 (45%), Gaps = 41/352 (11%)
Query: 35 LVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVR 94
+L+ C N + +++H+ +++ G D + LI +YS + +L ++
Sbjct: 32 FLLQNCKNFKHL---RQIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYA--ILLFYQIQ 86
Query: 95 LRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGC----SFRQGIS 150
+WN II A++ L+++A+++ K M G+ TF V+ C S G
Sbjct: 87 NPCTFTWNLIIRANTINGLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKV 146
Query: 151 MHCCVYKLGLLNNEIPLANSVMSMYAK-------------------------------FG 179
+H + K G + ++ + N+++ Y K G
Sbjct: 147 VHGSLIKYG-FSGDVFVQNNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCG 205
Query: 180 KVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLIL 239
+ EAR IFDEI ++VSWT +I GY+ EA L +M+ ++ P+ ++LI
Sbjct: 206 DLQEARRIFDEIPSKNVVSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIK 265
Query: 240 GCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFL 299
C ++G L L +H +K+ L L+ MY+KCG ++ A VF+ + KS+
Sbjct: 266 ACTEMGILTLGRGIHDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPT 325
Query: 300 WTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKG 351
W SMI G EA+NLF + + +V+P+ T L AC + ++ +G
Sbjct: 326 WNSMITSLGVHGLGQEALNLFSEMERVNVKPDAITFIGVLCACVHIKNVKEG 377
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 92/196 (46%), Gaps = 6/196 (3%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI N EE L + M + N +T ++KAC + + G+ +H + +K
Sbjct: 228 MINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMGILTLGRGIHDYAIKNC 287
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+ ++ T LIDMYSKC + +V + MP +S+ +WNS+I++ L EA+ +
Sbjct: 288 IEIGVYLGTALIDMYSKCGSIKDAIEVFETMP--RKSLPTWNSMITSLGVHGLGQEALNL 345
Query: 121 LKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGLLN---NEIPLANSVMS-MYA 176
EM + ++ A TF+ V+ C + + C + + IP M+ +YA
Sbjct: 346 FSEMERVNVKPDAITFIGVLCACVHIKNVKEGCAYFTRMTQHYGIAPIPEHYECMTELYA 405
Query: 177 KFGKVNEARSIFDEIG 192
+ ++EA E+G
Sbjct: 406 RSNNLDEAFKSTKEVG 421
>gi|224107052|ref|XP_002333576.1| predicted protein [Populus trichocarpa]
gi|222837227|gb|EEE75606.1| predicted protein [Populus trichocarpa]
Length = 781
Score = 364 bits (935), Expect = 7e-98, Method: Compositional matrix adjust.
Identities = 214/628 (34%), Positives = 347/628 (55%), Gaps = 16/628 (2%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIW--DGKRVHSHVLK 58
+I T NG E+ M+ G N F F ++AC + +W G++VH + ++
Sbjct: 72 LISGYTQNGMPEDACGVLKEMIFEGFLPNRFAFGSAIRACQE-SMLWRRKGRQVHGYAIR 130
Query: 59 VGFQQ-DAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEA 117
G V GLI+MY+KC D +R V M + VSWNS+I+ + ++A
Sbjct: 131 TGLNDAKVAVGNGLINMYAKCGDIDHARSVFGLMVDK--DSVSWNSMITGLDQNKCFEDA 188
Query: 118 ILVLKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMS 173
+ M GL S +S +S C+ G H KLGL + ++ ++N++++
Sbjct: 189 VKSYNSMRKTGLMPSNFALISALSSCASLGCILLGQQTHGEGIKLGL-DMDVSVSNTLLA 247
Query: 174 MYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVG-NVNEAFGLCNQMRRMSVTPDLV 232
+YA+ ++ E + +F + E VSW T+IG + G +V+EA + +M R +P+ V
Sbjct: 248 LYAETSRLAECQKVFSWMLERDQVSWNTVIGALADSGASVSEAIEVFLEMMRAGWSPNRV 307
Query: 233 VFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAV 292
F+NL+ + + L+ +H+L+LK +++ ++N L++ Y K G++E +F +
Sbjct: 308 TFINLLATVSSLSTSKLSHQIHALILKYNVKDDNAIENALLACYGKSGEMENCEEIFSRM 367
Query: 293 LEKSVFL-WTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKG 351
E+ + W SMI GY +A++L +++ R + T AT LSACA + +L G
Sbjct: 368 SERRDEVSWNSMISGYIHNELLCKAMDLVWLMMQRGQRLDCFTFATVLSACATVATLECG 427
Query: 352 KEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIH 411
E+ + LES+ + ++L+ M+SKCGRI+ A F +P ++L W++MI+GYA H
Sbjct: 428 MEVHACAIRACLESDVVIGSALVDMYSKCGRIDYASRFFNLMPVRNLYSWNSMISGYARH 487
Query: 412 GMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIE 471
G GD AL LF +M+ + G PD + + +LSACSH G+VD+G +FKSM +G+ P +E
Sbjct: 488 GHGDNALRLFTRMK-LSGQLPDHITFVGVLSACSHIGLVDEGFEYFKSMTEVYGLVPRVE 546
Query: 472 HYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHH--NVELGEYAAKNLL 529
HY C+VDLLGRAG D I++MP++ +W +L AC + + ELG AA+ L
Sbjct: 547 HYSCMVDLLGRAGELDKIENFINKMPIKPNILIWRTVLGACCRGNGRKTELGRRAAEMLF 606
Query: 530 TLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGD 589
++P + NY+L++N++ S G W++ A R M + + KE G S V + V VFVAGD
Sbjct: 607 NMDPQNAVNYVLLSNMYASGGKWEDMARTRRAMREAAVKKEAGCSWVTMKDGVHVFVAGD 666
Query: 590 RSHHLSVDIRKTLKELHIKLLEAGYIAE 617
SH I LKEL K+ +AGY+ +
Sbjct: 667 NSHPEKGLIYAKLKELDKKIRDAGYVPQ 694
Score = 198 bits (503), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 128/475 (26%), Positives = 236/475 (49%), Gaps = 12/475 (2%)
Query: 48 DGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISA 107
D H +VLK GF D F+ LI++Y + D VS+RK+ DEMP R+ V+W +IS
Sbjct: 18 DANLFHLNVLKHGFDSDLFLCNTLINVYVRIGDCVSARKLFDEMPD--RNGVTWACLISG 75
Query: 108 HSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCS-----FRQGISMHCCVYKLGLLN 162
+++ + ++A VLKEM G + F S + C R+G +H + GL +
Sbjct: 76 YTQNGMPEDACGVLKEMIFEGFLPNRFAFGSAIRACQESMLWRRKGRQVHGYAIRTGLND 135
Query: 163 NEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQM 222
++ + N +++MYAK G ++ ARS+F + + VSW ++I G +A N M
Sbjct: 136 AKVAVGNGLINMYAKCGDIDHARSVFGLMVDKDSVSWNSMITGLDQNKCFEDAVKSYNSM 195
Query: 223 RRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDL 282
R+ + P ++ + CA +G + L H +K G + + + N L+++Y + L
Sbjct: 196 RKTGLMPSNFALISALSSCASLGCILLGQQTHGEGIKLGLDMDVSVSNTLLALYAETSRL 255
Query: 283 ELARRVFDAVLEKSVFLWTSMIGGYAQLGYP-SEAVNLFKRLLKTSVRPNEATLATTLSA 341
++VF +LE+ W ++IG A G SEA+ +F +++ PN T L+
Sbjct: 256 AECQKVFSWMLERDQVSWNTVIGALADSGASVSEAIEVFLEMMRAGWSPNRVTFINLLAT 315
Query: 342 CAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPD-KDLAV 400
+ L + +I I+ ++ + ++ +L+ + K G + +E+F R+ + +D
Sbjct: 316 VSSLSTSKLSHQIHALILKYNVKDDNAIENALLACYGKSGEMENCEEIFSRMSERRDEVS 375
Query: 401 WSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSM 460
W++MI+GY + + +A++L + M G + D + ++LSAC+ ++ G+ +
Sbjct: 376 WNSMISGYIHNELLCKAMDLVWLMMQ-RGQRLDCFTFATVLSACATVATLECGME-VHAC 433
Query: 461 QSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKH 515
+E + LVD+ + GR D A + + MPV W ++S +H
Sbjct: 434 AIRACLESDVVIGSALVDMYSKCGRIDYASRFFNLMPVR-NLYSWNSMISGYARH 487
>gi|297739711|emb|CBI29893.3| unnamed protein product [Vitis vinifera]
Length = 784
Score = 364 bits (934), Expect = 8e-98, Method: Compositional matrix adjust.
Identities = 186/503 (36%), Positives = 292/503 (58%), Gaps = 6/503 (1%)
Query: 124 MWVLGLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFG 179
M + GLE+ + SV++ C + R+G +H + K + L ++ +Y K
Sbjct: 1 MGIQGLEVEFQGYDSVLTECISQTAIREGQRVHAHMIKT-CYEPPVYLRTRLIVLYNKCR 59
Query: 180 KVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLIL 239
+ +AR + DE+ E ++VSWT +I GY G +EA L +M P+ F ++
Sbjct: 60 CLGDARRVLDEMPERNVVSWTAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTFATVLT 119
Query: 240 GCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFL 299
C L +HSL++K+ + + + + L+ MY K G + ARRVFD + E+ V
Sbjct: 120 SCTSSSGFQLGRQIHSLVIKTSFESHIFVGSSLLDMYAKAGKICEARRVFDGLPERDVVS 179
Query: 300 WTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIV 359
T++I GYAQLG EA++LF+RL + +R N T A+ L+A + L +L G+++ +++
Sbjct: 180 CTAIISGYAQLGLDEEALDLFRRLQREGMRSNYVTYASVLTALSGLAALDHGRQVHSHVL 239
Query: 360 LNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALN 419
L +Q SLI M+SKCG + ++ +F+ +P++ + W+AM+ GY+ HG+G +A+
Sbjct: 240 RAKLPFYVVLQNSLIDMYSKCGSLTYSRRIFDSMPERTVISWNAMLVGYSKHGLGREAVE 299
Query: 420 LFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSM-QSNFGIEPSIEHYLCLVD 478
LF M+ +KPD+V + ++LS CSH GM D GL F M G EP IEHY C+VD
Sbjct: 300 LFKLMKEENKVKPDSVTFLAVLSGCSHGGMEDRGLEIFYEMVNQKDGFEPEIEHYGCVVD 359
Query: 479 LLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGN 538
L GRAGR + A + I +MP E A +W LL AC H NV +GE+ A+ LL + + GN
Sbjct: 360 LFGRAGRVEEAFEFIKKMPFEPTAAIWGSLLGACRVHQNVHIGEFVARRLLEIESENAGN 419
Query: 539 YILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDI 598
Y++++NL+ SAG W + T R LM ++ + KEPG S +E+D ++ F A DRSH ++
Sbjct: 420 YVILSNLYASAGRWDDVRTVRELMKEKAVIKEPGRSWIELDQTLHTFHASDRSHPRKEEV 479
Query: 599 RKTLKELHIKLLEAGYIAEADIV 621
++EL IK+ EAGY+ E V
Sbjct: 480 FAKVRELSIKIKEAGYVPELSCV 502
Score = 215 bits (548), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 126/385 (32%), Positives = 217/385 (56%), Gaps = 13/385 (3%)
Query: 36 VLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRL 95
VL C + +I +G+RVH+H++K ++ +++T LI +Y+KC +R+VLDEMP
Sbjct: 16 VLTECISQTAIREGQRVHAHMIKTCYEPPVYLRTRLIVLYNKCRCLGDARRVLDEMPE-- 73
Query: 96 RSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCS----FRQGISM 151
R+VVSW ++IS +S+ EA+ + EM + G + TF +V++ C+ F+ G +
Sbjct: 74 RNVVSWTAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTFATVLTSCTSSSGFQLGRQI 133
Query: 152 HCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGN 211
H V K + I + +S++ MYAK GK+ EAR +FD + E +VS T II GY +G
Sbjct: 134 HSLVIKTS-FESHIFVGSSLLDMYAKAGKICEARRVFDGLPERDVVSCTAIISGYAQLGL 192
Query: 212 VNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNL 271
EA L +++R + + V + +++ + + L +HS +L++ L N
Sbjct: 193 DEEALDLFRRLQREGMRSNYVTYASVLTALSGLAALDHGRQVHSHVLRAKLPFYVVLQNS 252
Query: 272 LVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLK--TSVR 329
L+ MY+KCG L +RR+FD++ E++V W +M+ GY++ G EAV LFK L+K V+
Sbjct: 253 LIDMYSKCGSLTYSRRIFDSMPERTVISWNAMLVGYSKHGLGREAVELFK-LMKEENKVK 311
Query: 330 PNEATLATTLSACAELGSLSKGKEIEEYIV--LNGLESNRQVQTSLIHMFSKCGRINKAK 387
P+ T LS C+ G +G EI +V +G E + ++ +F + GR+ +A
Sbjct: 312 PDSVTFLAVLSGCSHGGMEDRGLEIFYEMVNQKDGFEPEIEHYGCVVDLFGRAGRVEEAF 371
Query: 388 EVFERVP-DKDLAVWSAMINGYAIH 411
E +++P + A+W +++ +H
Sbjct: 372 EFIKKMPFEPTAAIWGSLLGACRVH 396
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 93/314 (29%), Positives = 158/314 (50%), Gaps = 11/314 (3%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI + G E L + ML +G N FTF VL +C + + G+++HS V+K
Sbjct: 82 MISGYSQRGYASEALHLFVEMLMSGTAPNEFTFATVLTSCTSSSGFQLGRQIHSLVIKTS 141
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F+ FV + L+DMY+K +R+V D +P R VVS +IIS +++ L++EA+ +
Sbjct: 142 FESHIFVGSSLLDMYAKAGKICEARRVFDGLPE--RDVVSCTAIISGYAQLGLDEEALDL 199
Query: 121 LKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
+ + G+ + T+ SV++ S G +H V + L + L NS++ MY+
Sbjct: 200 FRRLQREGMRSNYVTYASVLTALSGLAALDHGRQVHSHVLR-AKLPFYVVLQNSLIDMYS 258
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMS-VTPDLVVFL 235
K G + +R IFD + E +++SW ++ GY G EA L M+ + V PD V FL
Sbjct: 259 KCGSLTYSRRIFDSMPERTVISWNAMLVGYSKHGLGREAVELFKLMKEENKVKPDSVTFL 318
Query: 236 NLILGCAQVGNLFLALSMHSLLL--KSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAV- 292
++ GC+ G L + ++ K G+ E +V ++ + G +E A +
Sbjct: 319 AVLSGCSHGGMEDRGLEIFYEMVNQKDGFEPEIEHYGCVVDLFGRAGRVEEAFEFIKKMP 378
Query: 293 LEKSVFLWTSMIGG 306
E + +W S++G
Sbjct: 379 FEPTAAIWGSLLGA 392
>gi|298204424|emb|CBI16904.3| unnamed protein product [Vitis vinifera]
Length = 843
Score = 363 bits (933), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 201/621 (32%), Positives = 336/621 (54%), Gaps = 47/621 (7%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+I N L + M + GV + TF V ++CA ++++ G ++H H LK
Sbjct: 246 IIAGCVQNDDLRGGLELFKEMQKAGVGVSQSTFASVFRSCAGLSALRLGSQLHGHALKTD 305
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F D + T +DMY KC++ ++K+ + +P ++ S+N+II ++R+ + L
Sbjct: 306 FGTDVVIGTATLDMYMKCNNLSDAQKLFNSLPNH--NLQSYNAIIVGYARS----DKGLG 359
Query: 121 LKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGK 180
L E+ + G A +V+ G +G+ +H K L + I +AN+++ MY K G
Sbjct: 360 LDEVSLSG----AFRACAVIKG--DLEGLQVHGLSMK-SLCQSNICVANAILDMYGKCGA 412
Query: 181 VNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILG 240
+ EA +F+E+ VSW II + GN +
Sbjct: 413 LVEACLVFEEMVSRDAVSWNAIIAAHEQNGNEEKT------------------------- 447
Query: 241 CAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLW 300
L+L +H+ ++KS + + L+ MY+KCG +E A ++ D + E++V W
Sbjct: 448 --------LSLFIHNRIIKSRLGLDSFVGIALIDMYSKCGMMEKAEKLHDRLAEQTVVSW 499
Query: 301 TSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVL 360
++I G++ EA F ++L+ V P+ T AT L CA L ++ GK+I I+
Sbjct: 500 NAIISGFSLQKQSEEAQKTFSKMLEMGVDPDNFTYATILDTCANLVTVELGKQIHAQIIK 559
Query: 361 NGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNL 420
L+S+ + ++L+ M+SKCG + + +FE+ P++D W+AM+ GYA HG+G++AL +
Sbjct: 560 KELQSDAYISSTLVDMYSKCGNMQDFQLIFEKAPNRDFVTWNAMVCGYAQHGLGEEALKI 619
Query: 421 FYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLL 480
F MQ +E +KP+ + ++L AC H G+V+ GL +F SM SN+G++P +EHY C+VD++
Sbjct: 620 FEYMQ-LENVKPNHATFLAVLRACGHMGLVEKGLHYFHSMLSNYGLDPQLEHYSCVVDIM 678
Query: 481 GRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYI 540
GR+G+ AL+ I MP E A +W LLS C H NVE+ E AA ++L L P + Y+
Sbjct: 679 GRSGQVSKALELIEGMPFEADAVIWRTLLSICKIHGNVEVAEKAAYSILQLEPEDSAAYV 738
Query: 541 LMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRK 600
L++N++ +AGMW E R +M L KEPG S +EI V F+ GD++H S +I +
Sbjct: 739 LLSNIYANAGMWNEVTKLRKMMRFNGLKKEPGCSWIEIKSEVHAFLVGDKAHPRSKEIYE 798
Query: 601 TLKELHIKLLEAGYIAEADIV 621
L L ++ GY+ + D +
Sbjct: 799 NLDVLTDEMKWVGYMPDTDFI 819
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 128/528 (24%), Positives = 239/528 (45%), Gaps = 57/528 (10%)
Query: 32 TFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEM 91
TF + + C++ ++ GK+ H+ ++ F+ FV LI MY KCSD + KV D M
Sbjct: 44 TFSHIFQECSDRKALCPGKQAHARMILTEFKPTVFVTNCLIQMYIKCSDLEFAFKVFDGM 103
Query: 92 PVR-----------------------------LRSVVSWNSIISAHSRACLNDEAILVLK 122
P R R VVSWNS+IS + + + I V
Sbjct: 104 PQRDTVSWNAMLFGYAGRGDIGVAQKLFDAMPERDVVSWNSLISGYLHNGDHRKVIDVFL 163
Query: 123 EMWVLGLELSASTFVSVVSGCSFRQ----GISMHCCVYKLGLLNNEIPLANSVMSMYAKF 178
+M +G +TF V+ CS + GI +H K+G + ++ ++++ MYAK
Sbjct: 164 QMGRMGTVFDRTTFAVVLKSCSSLEDHGGGIQIHGLAVKMGF-DCDVVTGSALLDMYAKC 222
Query: 179 GKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLI 238
K++ + F + E + VSW+ II G V ++ L +M++ V F ++
Sbjct: 223 KKLDCSIQFFHSMPEKNWVSWSAIIAGCVQNDDLRGGLELFKEMQKAGVGVSQSTFASVF 282
Query: 239 LGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVF 298
CA + L L +H LK+ + + + + MY KC +L A+++F+++ ++
Sbjct: 283 RSCAGLSALRLGSQLHGHALKTDFGTDVVIGTATLDMYMKCNNLSDAQKLFNSLPNHNLQ 342
Query: 299 LWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYI 358
+ ++I GYA+ + + L +E +L+ ACA + +G ++
Sbjct: 343 SYNAIIVGYAR---SDKGLGL-----------DEVSLSGAFRACAVIKGDLEGLQVHGLS 388
Query: 359 VLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQAL 418
+ + +SN V +++ M+ KCG + +A VFE + +D W+A+I + +G ++ L
Sbjct: 389 MKSLCQSNICVANAILDMYGKCGALVEACLVFEEMVSRDAVSWNAIIAAHEQNGNEEKTL 448
Query: 419 NLFYKMQHVEG-LKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLV 477
+LF + ++ L D+ V +++ S GM++ + E ++ + ++
Sbjct: 449 SLFIHNRIIKSRLGLDSFVGIALIDMYSKCGMMEKAEKLHDRLA-----EQTVVSWNAII 503
Query: 478 DLLGRAGRFDLALKTIH---EMPVEVQAQVWAPLLSACMKHHNVELGE 522
+ + A KT EM V+ +A +L C VELG+
Sbjct: 504 SGFSLQKQSEEAQKTFSKMLEMGVDPDNFTYATILDTCANLVTVELGK 551
>gi|449445041|ref|XP_004140282.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27110-like [Cucumis sativus]
gi|449481162|ref|XP_004156100.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27110-like [Cucumis sativus]
Length = 693
Score = 363 bits (933), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 197/607 (32%), Positives = 340/607 (56%), Gaps = 12/607 (1%)
Query: 6 TNNGSFEETLSTYSSM-LQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQD 64
TNN F E L + + + V + +T+P+VLKAC + + G+R+H+H+LK G D
Sbjct: 81 TNNFRFVEALQLFDQLNCNSYVRPDFYTYPVVLKACGGLGRVIYGRRIHNHLLKTGLIWD 140
Query: 65 AFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEM 124
FV + L++MY+KC FV + K+ DE P R V WN++IS + + + A+ +M
Sbjct: 141 VFVGSSLMNMYAKCDQFVDAIKLFDEFPQR--DVGCWNAVISCYFKDGKAEMALKTFDKM 198
Query: 125 WVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGK 180
LG E ++ TF VVS C+ +G +H + + +L + L+ +++ MY K G
Sbjct: 199 KELGFEPNSVTFTVVVSSCTRLLNLERGKEVHRELIERRILLDAFVLS-ALVDMYGKCGC 257
Query: 181 VNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILG 240
+ A+ +F++I + ++W +I GY G+ L +M P L+ ++I
Sbjct: 258 LEMAKEVFEKIPRKNAITWNAMITGYSLKGDSRSCIELLMRMNDEGTKPTLMTLTSIIYA 317
Query: 241 CAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLW 300
++ L +H +L++ + + +D L+ Y KCG + A +F + + V W
Sbjct: 318 SSRSVQLRHGKFIHGYILRNRIDVDIFIDVSLIDFYFKCGYVSSAETIFRTISKNEVVSW 377
Query: 301 TSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVL 360
MI G+ +G +A++++ + + V+P+ T ++TLSAC++L +L KG+E+ I+
Sbjct: 378 NVMISGHVMVGNHIQALHIYDNMKEHHVKPDALTFSSTLSACSQLAALDKGRELHYCIIN 437
Query: 361 NGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNL 420
+ LE+N V +L+ M++KCG +++A+++F ++P +DL W++MI Y HG +AL L
Sbjct: 438 HKLEANEIVMGALLDMYAKCGDVDEARKLFHQLPKRDLVSWTSMIFAYGSHGQASEALRL 497
Query: 421 FYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLL 480
F +MQ + ++ D+V + ++LSACSH+G+VD+G +F M + I+P IEHY CL+DLL
Sbjct: 498 FDEMQKL-NVRADSVTFLAVLSACSHAGLVDEGYMYFNEMVVQYDIKPGIEHYSCLIDLL 556
Query: 481 GRAGRFDLALKTIHEMPVEVQAQV--WAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGN 538
GRAGR A + + E ++ + + L SAC+ H+N LG K L+ ++P
Sbjct: 557 GRAGRLHEAYEILQRSK-ETRSDIGLLSTLFSACLLHNNFVLGIQIGKMLIEVDPDDPST 615
Query: 539 YILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDI 598
YIL++N++ S W E R M + L K PG S +EI+ + F A D+S+ L+ +
Sbjct: 616 YILLSNMYASVNKWDEVRKVRRKMKELGLKKSPGCSWIEINQRIHPFFAEDKSNPLADGV 675
Query: 599 RKTLKEL 605
+ L L
Sbjct: 676 YECLNIL 682
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 126/466 (27%), Positives = 224/466 (48%), Gaps = 9/466 (1%)
Query: 37 LKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLR 96
L+ C + + GK +H + GFQ + + LI Y C D+ S+ V L
Sbjct: 10 LRTCTSSKLLKQGKLIHQRIFSCGFQSNIVLSKSLIGFYFSCHDYASAELVFQTNDCPL- 68
Query: 97 SVVSWNSIISAHSRACLNDEAILVLKEMWVLG-LELSASTFVSVVSGCS----FRQGISM 151
V WN+++SA++ EA+ + ++ + T+ V+ C G +
Sbjct: 69 DVSLWNALLSAYTNNFRFVEALQLFDQLNCNSYVRPDFYTYPVVLKACGGLGRVIYGRRI 128
Query: 152 HCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGN 211
H + K GL+ ++ + +S+M+MYAK + +A +FDE + + W +I Y G
Sbjct: 129 HNHLLKTGLI-WDVFVGSSLMNMYAKCDQFVDAIKLFDEFPQRDVGCWNAVISCYFKDGK 187
Query: 212 VNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNL 271
A ++M+ + P+ V F ++ C ++ NL +H L++ + + +
Sbjct: 188 AEMALKTFDKMKELGFEPNSVTFTVVVSSCTRLLNLERGKEVHRELIERRILLDAFVLSA 247
Query: 272 LVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPN 331
LV MY KCG LE+A+ VF+ + K+ W +MI GY+ G + L R+ +P
Sbjct: 248 LVDMYGKCGCLEMAKEVFEKIPRKNAITWNAMITGYSLKGDSRSCIELLMRMNDEGTKPT 307
Query: 332 EATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFE 391
TL + + A + L GK I YI+ N ++ + + SLI + KCG ++ A+ +F
Sbjct: 308 LMTLTSIIYASSRSVQLRHGKFIHGYILRNRIDVDIFIDVSLIDFYFKCGYVSSAETIFR 367
Query: 392 RVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVD 451
+ ++ W+ MI+G+ + G QAL+++ M+ +KPDA+ ++S LSACS +D
Sbjct: 368 TISKNEVVSWNVMISGHVMVGNHIQALHIYDNMKE-HHVKPDALTFSSTLSACSQLAALD 426
Query: 452 DGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMP 497
G + N +E + L+D+ + G D A K H++P
Sbjct: 427 KGRELHYCI-INHKLEANEIVMGALLDMYAKCGDVDEARKLFHQLP 471
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 74/249 (29%), Positives = 123/249 (49%), Gaps = 7/249 (2%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI + G + M G T ++ A + + GK +H ++L+
Sbjct: 279 MITGYSLKGDSRSCIELLMRMNDEGTKPTLMTLTSIIYASSRSVQLRHGKFIHGYILRNR 338
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
D F+ LID Y KC +VSS + + + VVSWN +IS H + +A+ +
Sbjct: 339 IDVDIFIDVSLIDFYFKCG-YVSSAETIFR-TISKNEVVSWNVMISGHVMVGNHIQALHI 396
Query: 121 LKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
M ++ A TF S +S CS +G +H C+ L NEI + +++ MYA
Sbjct: 397 YDNMKEHHVKPDALTFSSTLSACSQLAALDKGRELHYCIINHKLEANEIVMG-ALLDMYA 455
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K G V+EAR +F ++ + +VSWT++I Y + G +EA L ++M++++V D V FL
Sbjct: 456 KCGDVDEARKLFHQLPKRDLVSWTSMIFAYGSHGQASEALRLFDEMQKLNVRADSVTFLA 515
Query: 237 LILGCAQVG 245
++ C+ G
Sbjct: 516 VLSACSHAG 524
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/289 (23%), Positives = 123/289 (42%), Gaps = 34/289 (11%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI G+ + L Y +M + V ++ TF L AC+ + ++ G+ +H ++
Sbjct: 380 MISGHVMVGNHIQALHIYDNMKEHHVKPDALTFSSTLSACSQLAALDKGRELHYCIINHK 439
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+ + V L+DMY+KC D +RK+ ++P R +VSW S+I A+ EA+ +
Sbjct: 440 LEANEIVMGALLDMYAKCGDVDEARKLFHQLPK--RDLVSWTSMIFAYGSHGQASEALRL 497
Query: 121 LKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGK 180
EM L + + TF++V+S CS GL++ N ++ Y
Sbjct: 498 FDEMQKLNVRADSVTFLAVLSACS------------HAGLVDEGYMYFNEMVVQYDIKPG 545
Query: 181 VNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILG 240
+ + D +G G ++EA+ + R D+ + L
Sbjct: 546 IEHYSCLIDLLGRA---------------GRLHEAYEILQ--RSKETRSDIGLLSTLFSA 588
Query: 241 CAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVS-MYTKCGDLELARRV 288
C N L + + +L++ + +DP +L+S MY + R+V
Sbjct: 589 CLLHNNFVLGIQIGKMLIE--VDPDDPSTYILLSNMYASVNKWDEVRKV 635
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 56/238 (23%), Positives = 100/238 (42%), Gaps = 7/238 (2%)
Query: 334 TLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFER- 392
TL + L C L +GK I + I G +SN + SLI + C A+ VF+
Sbjct: 5 TLLSALRTCTSSKLLKQGKLIHQRIFSCGFQSNIVLSKSLIGFYFSCHDYASAELVFQTN 64
Query: 393 -VPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVD 451
P D+++W+A+++ Y + +AL LF ++ ++PD Y +L AC G V
Sbjct: 65 DCP-LDVSLWNALLSAYTNNFRFVEALQLFDQLNCNSYVRPDFYTYPVVLKACGGLGRVI 123
Query: 452 DGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSA 511
G + G+ + L+++ + +F A+K E P + W ++S
Sbjct: 124 YGRRIHNHLLKT-GLIWDVFVGSSLMNMYAKCDQFVDAIKLFDEFP-QRDVGCWNAVISC 181
Query: 512 CMKHHNVE--LGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRL 567
K E L + L P S +++++ + + R L++ R L
Sbjct: 182 YFKDGKAEMALKTFDKMKELGFEPNSVTFTVVVSSCTRLLNLERGKEVHRELIERRIL 239
>gi|449443642|ref|XP_004139586.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Cucumis sativus]
gi|449492832|ref|XP_004159115.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Cucumis sativus]
Length = 663
Score = 363 bits (933), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 209/648 (32%), Positives = 342/648 (52%), Gaps = 67/648 (10%)
Query: 39 ACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKV----------- 87
AC+++ I ++H K GF + +Q +IDMY KC ++ +V
Sbjct: 2 ACSSVGYIRIAHQLHGLSEKYGFGNNKVIQNSIIDMYIKCDAIYAAEQVFLRIEKPSLFS 61
Query: 88 ----------LDEMPVRL--------RSVVSWNSIISAHSRACLNDEAILVLKEMWVLGL 129
L EM + R VSWN+IISA S L+ +++ EMW+ G
Sbjct: 62 WNCMIYGYSKLHEMGRAIDTFRQMPERDSVSWNTIISAFSHHGLHIQSLGTFVEMWIQGC 121
Query: 130 ELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEAR 185
+ ++ T+ SV+S C+ F+ G +H + ++ ++ + N ++ MYAK G ++ ++
Sbjct: 122 QPNSMTYASVLSACANIYDFQWGKHLHARIVRVEPFL-DVLVGNGLVDMYAKCGLIDASK 180
Query: 186 SIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVG 245
+F+ + E ++V+WT++I G + G+ E + + QMR+ V D + ++ C
Sbjct: 181 RVFNTLREHNVVTWTSLISGIAHFGSQEEVYDIFYQMRKDCVIMDNFILATILGVCEGET 240
Query: 246 NLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGD------------------------ 281
N+ + +H +K+G N+ P+ N +SMY KCGD
Sbjct: 241 NISIGEQLHGFTVKTGMNSSVPVGNATLSMYAKCGDFEKASLAFETMAAHDVISWTTMIT 300
Query: 282 -------LELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEAT 334
+E AR F+ + E++V W +M+G Y Q + E + L+ +L+ VRP+ T
Sbjct: 301 SFSHSGNVERARDYFNRMPERNVISWNAMLGAYCQNSFWEEGLKLYILMLRQEVRPDWIT 360
Query: 335 LATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVP 394
T + AC+EL G +I V GL S+ V S I ++S+CGRI +A+ +F+ +
Sbjct: 361 FVTMIGACSELAISKLGTQILSQAVKVGLGSDVSVVNSAITLYSRCGRIEEAQNLFDSIQ 420
Query: 395 DKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGL 454
+K+L W++++ GYA +G G + + +F M + G KPD + Y +ILS CSHSG+V +
Sbjct: 421 EKNLISWNSIMGGYAQNGEGMKVIEIFQNML-MAGCKPDHITYIAILSGCSHSGLVKEAK 479
Query: 455 SFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMK 514
F SM +FGI ++EH++C+VDL GRAG LAL I +MP + A +W LLSAC
Sbjct: 480 YHFNSMTKDFGISVTLEHFVCMVDLFGRAGLLKLALDMIDQMPFKPNASIWGALLSACRI 539
Query: 515 HHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWS 574
HH+ E+ E A KNLL LN + +YIL+AN ++S G + + R +M ++R+ K+PG S
Sbjct: 540 HHDTEMAELAMKNLLELNTENFESYILLANTYSSFGRLECVSEVRQVMKEKRVQKDPGCS 599
Query: 575 QVEIDGSVQVFVAGDRSHHLSVDIRKTLKELHIKLL-EAGYIAEADIV 621
+E+ V VF A D SH DI K L+++ K+ + GY + V
Sbjct: 600 WIEVCNRVHVFTANDTSHPQVKDIYKALEDIVKKIKDDYGYFDRSSFV 647
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 118/453 (26%), Positives = 219/453 (48%), Gaps = 50/453 (11%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+I +++G ++L T+ M G NS T+ VL ACANI GK +H+ +++V
Sbjct: 96 IISAFSHHGLHIQSLGTFVEMWIQGCQPNSMTYASVLSACANIYDFQWGKHLHARIVRVE 155
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
D V GL+DMY+KC +S++V + + R +VV+W S+IS + +E +
Sbjct: 156 PFLDVLVGNGLVDMYAKCGLIDASKRVFNTL--REHNVVTWTSLISGIAHFGSQEEVYDI 213
Query: 121 LKEMWVLGLELSASTFVSVVSGCSFRQGIS----MHCCVYKLGLLNNEIPLANSVMSMYA 176
+M + + +++ C IS +H K G +N+ +P+ N+ +SMYA
Sbjct: 214 FYQMRKDCVIMDNFILATILGVCEGETNISIGEQLHGFTVKTG-MNSSVPVGNATLSMYA 272
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMR------------- 223
K G +A F+ + ++SWTT+I + + GNV A N+M
Sbjct: 273 KCGDFEKASLAFETMAAHDVISWTTMITSFSHSGNVERARDYFNRMPERNVISWNAMLGA 332
Query: 224 ------------------RMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNE 265
R V PD + F+ +I C+++ L + S +K G ++
Sbjct: 333 YCQNSFWEEGLKLYILMLRQEVRPDWITFVTMIGACSELAISKLGTQILSQAVKVGLGSD 392
Query: 266 DPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLK 325
+ N +++Y++CG +E A+ +FD++ EK++ W S++GGYAQ G + + +F+ +L
Sbjct: 393 VSVVNSAITLYSRCGRIEEAQNLFDSIQEKNLISWNSIMGGYAQNGEGMKVIEIFQNMLM 452
Query: 326 TSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIH------MFSK 379
+P+ T LS C+ G + + K N + + + +L H +F +
Sbjct: 453 AGCKPDHITYIAILSGCSHSGLVKEAK-----YHFNSMTKDFGISVTLEHFVCMVDLFGR 507
Query: 380 CGRINKAKEVFERVPDK-DLAVWSAMINGYAIH 411
G + A ++ +++P K + ++W A+++ IH
Sbjct: 508 AGLLKLALDMIDQMPFKPNASIWGALLSACRIH 540
Score = 105 bits (261), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 86/371 (23%), Positives = 152/371 (40%), Gaps = 49/371 (13%)
Query: 239 LGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVF 298
+ C+ VG + +A +H L K G+ N + N ++ MY KC + A +VF + + S+F
Sbjct: 1 MACSSVGYIRIAHQLHGLSEKYGFGNNKVIQNSIIDMYIKCDAIYAAEQVFLRIEKPSLF 60
Query: 299 LWTSMIGGYAQLGYPSEAVNLFKRL------------------------LKTSV------ 328
W MI GY++L A++ F+++ L T V
Sbjct: 61 SWNCMIYGYSKLHEMGRAIDTFRQMPERDSVSWNTIISAFSHHGLHIQSLGTFVEMWIQG 120
Query: 329 -RPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAK 387
+PN T A+ LSACA + GK + IV + V L+ M++KCG I+ +K
Sbjct: 121 CQPNSMTYASVLSACANIYDFQWGKHLHARIVRVEPFLDVLVGNGLVDMYAKCGLIDASK 180
Query: 388 EVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHS 447
VF + + ++ W+++I+G A G ++ ++FY+M+ + + D + +IL C
Sbjct: 181 RVFNTLREHNVVTWTSLISGIAHFGSQEEVYDIFYQMRK-DCVIMDNFILATILGVCEGE 239
Query: 448 GMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAP 507
+ G G+ S+ + + + G F+ A M W
Sbjct: 240 TNISIGEQ-LHGFTVKTGMNSSVPVGNATLSMYAKCGDFEKASLAFETMAAH-DVISWTT 297
Query: 508 LLSACMKHHNVE-----LGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLM 562
++++ NVE +N+++ N M + W+E LM
Sbjct: 298 MITSFSHSGNVERARDYFNRMPERNVISWNA--------MLGAYCQNSFWEEGLKLYILM 349
Query: 563 DDRRLTKEPGW 573
R P W
Sbjct: 350 --LRQEVRPDW 358
>gi|414586383|tpg|DAA36954.1| TPA: hypothetical protein ZEAMMB73_991125 [Zea mays]
Length = 1021
Score = 363 bits (933), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 208/613 (33%), Positives = 334/613 (54%), Gaps = 11/613 (1%)
Query: 12 EETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGL 71
EET+ + M + + + FTF VL AC N+ S+ G++VH +K G D FV +
Sbjct: 407 EETIQMFQYMRRADLEADDFTFVSVLGACINLYSLDLGRQVHCITIKNGMDADLFVANAM 466
Query: 72 IDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLEL 131
+DMYSK ++ + +PV+ VSWN++I + EAI +LK M G+ L
Sbjct: 467 LDMYSKLGAIDVAKALFSLIPVK--DSVSWNALIVGLAHNEEEGEAINMLKRMKFYGIAL 524
Query: 132 SASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSI 187
+F + ++ CS G +H K + +N + +S++ +Y+KFG V +R +
Sbjct: 525 DEVSFATAINACSNIWAIETGKQIHSASIKYNVCSNH-AVGSSLIDLYSKFGDVESSRKV 583
Query: 188 FDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNL 247
+ +SIV +I G V +EA L Q+ + P F +++ GC + +
Sbjct: 584 LAHVDASSIVPINALITGLVQNNREDEAIELFQQVLKDGFKPSNFTFTSILSGCTRPVSS 643
Query: 248 FLALSMHSLLLKSGYNNED-PLDNLLVSMYTKCGDLELARRVFDAVLE-KSVFLWTSMIG 305
+ +H LKS N+D L LV +Y KC LE A ++ + V + K++ WT+ I
Sbjct: 644 VIGKQVHCYTLKSAILNQDTSLGISLVGIYLKCKLLEDANKLLEEVPDHKNLVEWTATIS 703
Query: 306 GYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLES 365
GYAQ GY +++ +F R+ VR +EAT + L AC+E+ +L+ GKEI IV +G S
Sbjct: 704 GYAQNGYSVQSLVMFWRMRSYDVRSDEATFTSVLKACSEMAALTDGKEIHGLIVKSGFVS 763
Query: 366 NRQVQTSLIHMFSKCGRINKAKEVFERVPDK-DLAVWSAMINGYAIHGMGDQALNLFYKM 424
++L+ M+SKCG + + E+F+ + ++ ++ W++MI G+A +G ++AL LF KM
Sbjct: 764 YETATSALMDMYSKCGDVISSFEIFKELKNRQNIMPWNSMIVGFAKNGYANEALLLFQKM 823
Query: 425 QHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAG 484
Q + +KPD V +L ACSH+G++ +GL FF SM +GI P ++HY CL+DLLGR G
Sbjct: 824 QESQ-IKPDDVTLLGVLIACSHAGLISEGLHFFDSMSQVYGIVPRVDHYACLIDLLGRGG 882
Query: 485 RFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMAN 544
A + I ++P +WA L+AC H + E G+ AAK L+ + P S+ Y+ +++
Sbjct: 883 HLQKAQEVIDQLPFRADGVIWATYLAACQMHKDEERGKVAAKKLVEMEPQSSSTYVFLSS 942
Query: 545 LFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKE 604
L +AG W EA AR M ++ + K PG S + + VFV D H ++ I K L +
Sbjct: 943 LHAAAGNWVEAKVAREAMREKGVMKFPGCSWITVGNKQSVFVVQDTHHPDALSIYKMLDD 1002
Query: 605 LHIKLLEAGYIAE 617
L + + G I E
Sbjct: 1003 LTGMMNKDGRIKE 1015
Score = 207 bits (527), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 132/459 (28%), Positives = 235/459 (51%), Gaps = 10/459 (2%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+I + + +G E Y M + G+ TF +L A AN+ + +G+++H+ +K G
Sbjct: 295 VIASYSQSGLDSEVFGLYKDMKKQGLMPTRSTFASILSAAANMTAFDEGRQIHATAVKHG 354
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+ FV + LI++Y K ++KV D +++V WN+I+ + L +E I +
Sbjct: 355 LDANVFVGSSLINLYVKHGCISDAKKVFDFSTE--KNIVMWNAILYGFVQNELQEETIQM 412
Query: 121 LKEMWVLGLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
+ M LE TFVSV+ C S G +HC K G ++ ++ +AN+++ MY+
Sbjct: 413 FQYMRRADLEADDFTFVSVLGACINLYSLDLGRQVHCITIKNG-MDADLFVANAMLDMYS 471
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K G ++ A+++F I VSW +I G + EA + +M+ + D V F
Sbjct: 472 KLGAIDVAKALFSLIPVKDSVSWNALIVGLAHNEEEGEAINMLKRMKFYGIALDEVSFAT 531
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
I C+ + + +HS +K + + + L+ +Y+K GD+E +R+V V S
Sbjct: 532 AINACSNIWAIETGKQIHSASIKYNVCSNHAVGSSLIDLYSKFGDVESSRKVLAHVDASS 591
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEE 356
+ ++I G Q EA+ LF+++LK +P+ T + LS C S GK++
Sbjct: 592 IVPINALITGLVQNNREDEAIELFQQVLKDGFKPSNFTFTSILSGCTRPVSSVIGKQVHC 651
Query: 357 YIVLNG-LESNRQVQTSLIHMFSKCGRINKAKEVFERVPD-KDLAVWSAMINGYAIHGMG 414
Y + + L + + SL+ ++ KC + A ++ E VPD K+L W+A I+GYA +G
Sbjct: 652 YTLKSAILNQDTSLGISLVGIYLKCKLLEDANKLLEEVPDHKNLVEWTATISGYAQNGYS 711
Query: 415 DQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDG 453
Q+L +F++M+ + ++ D +TS+L ACS + DG
Sbjct: 712 VQSLVMFWRMRSYD-VRSDEATFTSVLKACSEMAALTDG 749
Score = 191 bits (486), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 122/496 (24%), Positives = 239/496 (48%), Gaps = 53/496 (10%)
Query: 7 NNGSFEETLSTYSSM-LQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDA 65
+GS + L + + G + F +VL AC+ + ++ G++VH VLK GF
Sbjct: 133 RSGSPRDVLDAFQRIRCSIGSTPDQFGIAVVLSACSRLGALEHGRQVHCDVLKSGFCSSV 192
Query: 66 FVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMW 125
F Q GL+DMY+KC + +R++ D + + W S+I+ + R +A+ + M
Sbjct: 193 FCQAGLVDMYAKCGEVDDARRMFD--GIACPDTICWTSMIAGYHRVGRYQQALALFSRM- 249
Query: 126 VLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEAR 185
K+G + +++ +++S A G++ +AR
Sbjct: 250 ------------------------------EKMGSVPDQVTCV-TIISTLASMGRLGDAR 278
Query: 186 SIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVG 245
++ I TS V+W +I Y G +E FGL M++ + P F +++ A +
Sbjct: 279 TLLKRIRMTSTVAWNAVIASYSQSGLDSEVFGLYKDMKKQGLMPTRSTFASILSAAANMT 338
Query: 246 NLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIG 305
+H+ +K G + + + L+++Y K G + A++VFD EK++ +W +++
Sbjct: 339 AFDEGRQIHATAVKHGLDANVFVGSSLINLYVKHGCISDAKKVFDFSTEKNIVMWNAILY 398
Query: 306 GYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLES 365
G+ Q E + +F+ + + + ++ T + L AC L SL G+++ + NG+++
Sbjct: 399 GFVQNELQEETIQMFQYMRRADLEADDFTFVSVLGACINLYSLDLGRQVHCITIKNGMDA 458
Query: 366 NRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQ 425
+ V +++ M+SK G I+ AK +F +P KD W+A+I G A + +A+N+ +M+
Sbjct: 459 DLFVANAMLDMYSKLGAIDVAKALFSLIPVKDSVSWNALIVGLAHNEEEGEAINMLKRMK 518
Query: 426 HVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLC--------LV 477
G+ D V + + ++ACS+ ++ G K + S SI++ +C L+
Sbjct: 519 FY-GIALDEVSFATAINACSNIWAIETG----KQIHS-----ASIKYNVCSNHAVGSSLI 568
Query: 478 DLLGRAGRFDLALKTI 493
DL + G + + K +
Sbjct: 569 DLYSKFGDVESSRKVL 584
Score = 178 bits (451), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 110/396 (27%), Positives = 209/396 (52%), Gaps = 8/396 (2%)
Query: 54 SHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACL 113
S + K+G D +I + +R +L +R+ S V+WN++I+++S++ L
Sbjct: 247 SRMEKMGSVPDQVTCVTIISTLASMGRLGDARTLLKR--IRMTSTVAWNAVIASYSQSGL 304
Query: 114 NDEAILVLKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLAN 169
+ E + K+M GL + STF S++S + F +G +H K GL N + + +
Sbjct: 305 DSEVFGLYKDMKKQGLMPTRSTFASILSAAANMTAFDEGRQIHATAVKHGLDAN-VFVGS 363
Query: 170 SVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTP 229
S++++Y K G +++A+ +FD E +IV W I+ G+V E + MRR +
Sbjct: 364 SLINLYVKHGCISDAKKVFDFSTEKNIVMWNAILYGFVQNELQEETIQMFQYMRRADLEA 423
Query: 230 DLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVF 289
D F++++ C + +L L +H + +K+G + + + N ++ MY+K G +++A+ +F
Sbjct: 424 DDFTFVSVLGACINLYSLDLGRQVHCITIKNGMDADLFVANAMLDMYSKLGAIDVAKALF 483
Query: 290 DAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLS 349
+ K W ++I G A EA+N+ KR+ + +E + AT ++AC+ + ++
Sbjct: 484 SLIPVKDSVSWNALIVGLAHNEEEGEAINMLKRMKFYGIALDEVSFATAINACSNIWAIE 543
Query: 350 KGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYA 409
GK+I + + SN V +SLI ++SK G + +++V V + +A+I G
Sbjct: 544 TGKQIHSASIKYNVCSNHAVGSSLIDLYSKFGDVESSRKVLAHVDASSIVPINALITGLV 603
Query: 410 IHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACS 445
+ D+A+ LF ++ +G KP +TSILS C+
Sbjct: 604 QNNREDEAIELFQQVLK-DGFKPSNFTFTSILSGCT 638
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 124/483 (25%), Positives = 225/483 (46%), Gaps = 48/483 (9%)
Query: 52 VHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRA 111
+H+ +L++G + L+D+Y + + + L S + +S++S H+R+
Sbjct: 75 LHARILRLGLPLRGRLGDALVDLYGRSGRVGYAWRALACCTGAPASSAAASSVLSCHARS 134
Query: 112 CLNDEAILVLKEMWV-LGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIP 166
+ + + + +G V+S CS G +HC V K G ++
Sbjct: 135 GSPRDVLDAFQRIRCSIGSTPDQFGIAVVLSACSRLGALEHGRQVHCDVLKSGFCSSVFC 194
Query: 167 LANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMS 226
A ++ MYAK G+V++AR +FD I + WT++I GY VG +A L ++M +M
Sbjct: 195 QAG-LVDMYAKCGEVDDARRMFDGIACPDTICWTSMIAGYHRVGRYQQALALFSRMEKMG 253
Query: 227 VTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELAR 286
PD V + +I A +G L GD AR
Sbjct: 254 SVPDQVTCVTIISTLASMGRL--------------------------------GD---AR 278
Query: 287 RVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELG 346
+ + S W ++I Y+Q G SE L+K + K + P +T A+ LSA A +
Sbjct: 279 TLLKRIRMTSTVAWNAVIASYSQSGLDSEVFGLYKDMKKQGLMPTRSTFASILSAAANMT 338
Query: 347 SLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMIN 406
+ +G++I V +GL++N V +SLI+++ K G I+ AK+VF+ +K++ +W+A++
Sbjct: 339 AFDEGRQIHATAVKHGLDANVFVGSSLINLYVKHGCISDAKKVFDFSTEKNIVMWNAILY 398
Query: 407 GYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGI 466
G+ + + ++ + +F M+ + L+ D + S+L AC + +D G N G+
Sbjct: 399 GFVQNELQEETIQMFQYMRRAD-LEADDFTFVSVLGACINLYSLDLGRQVHCITIKN-GM 456
Query: 467 EPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAK 526
+ + ++D+ + G D+A +PV+ + W L+ HN E GE A
Sbjct: 457 DADLFVANAMLDMYSKLGAIDVAKALFSLIPVK-DSVSWNALIVGLA--HNEEEGE--AI 511
Query: 527 NLL 529
N+L
Sbjct: 512 NML 514
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 94/192 (48%), Gaps = 13/192 (6%)
Query: 2 IRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGF 61
I NG ++L + M V + TF VLKAC+ + ++ DGK +H ++K GF
Sbjct: 702 ISGYAQNGYSVQSLVMFWRMRSYDVRSDEATFTSVLKACSEMAALTDGKEIHGLIVKSGF 761
Query: 62 QQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVL 121
+ L+DMYSKC D +SS ++ E+ R ++++ WNS+I ++ +EA+L+
Sbjct: 762 VSYETATSALMDMYSKCGDVISSFEIFKELKNR-QNIMPWNSMIVGFAKNGYANEALLLF 820
Query: 122 KEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKV 181
++M ++ T + V+ CS GL++ + +S+ +Y +V
Sbjct: 821 QKMQESQIKPDDVTLLGVLIACS------------HAGLISEGLHFFDSMSQVYGIVPRV 868
Query: 182 NEARSIFDEIGE 193
+ + D +G
Sbjct: 869 DHYACLIDLLGR 880
>gi|125571373|gb|EAZ12888.1| hypothetical protein OsJ_02809 [Oryza sativa Japonica Group]
Length = 669
Score = 363 bits (932), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 202/585 (34%), Positives = 328/585 (56%), Gaps = 11/585 (1%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSI-W--DGKRVHSHVL 57
MIR ++ + + L+ + M + GV +++T V+ A A + W +G +H+ V
Sbjct: 89 MIRGYSSCEAPRDALAVFREMRRRGVSPDNYTMAAVVSASAAFAGLKWRSNGDAIHALVR 148
Query: 58 KVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEA 117
++GF D FV +GL++ Y + KV +EM R VVSW S+ISA ++ D+
Sbjct: 149 RIGFTSDVFVMSGLVNYYGAFRSVEEASKVFEEM--YERDVVSWTSMISACAQCGHWDKV 206
Query: 118 ILVLKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVY----KLGLLNNEIPLANSVMS 173
+ +L EM G+ + T +S++S C Q + VY K G+ ++ + N+++S
Sbjct: 207 LKMLSEMQAEGIIPNKVTIISLLSACGQTQAVDEGRWVYNQVGKFGI-EADVDIRNALIS 265
Query: 174 MYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVV 233
MY K G +++A F + SW T+I G+V EA + +M VTPD +
Sbjct: 266 MYTKCGCLSDALEAFQAMPARYTKSWNTLIDGFVQNHEHKEALRIFEEMLLHGVTPDGIT 325
Query: 234 FLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVL 293
++++ CAQ+G L + +HS + +G ++ L N L++MY KCGD+ A RVF +
Sbjct: 326 LVSVLSACAQLGELRKGMHVHSYIKDNGICCDNILTNSLINMYAKCGDMAAAERVFQTMT 385
Query: 294 EKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKE 353
+K V WT M+ GY + + A NLF+ + V +E L + LSAC++LG+L KG+E
Sbjct: 386 KKDVVSWTVMVCGYVKGHQFTMAFNLFEEMKIAEVVAHEMALVSLLSACSQLGALDKGRE 445
Query: 354 IEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGM 413
I YI + + ++++L+ M++KCG I+ A E+F ++ K W+AMI G A +G
Sbjct: 446 IHSYIEEMNVAKDLCLESALVDMYAKCGCIDTASEIFRKMQHKQTLSWNAMIGGLASNGY 505
Query: 414 GDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHY 473
G +A+ LF +M ++ KPD + ++L AC+H GMVD+GL +F M S+ G+ P EHY
Sbjct: 506 GKEAVELFDQMLELQDPKPDGITLKAVLGACAHVGMVDEGLRYFYLM-SSLGVVPDTEHY 564
Query: 474 LCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNP 533
C+VDLLGRAG D A I +MP+E +W LL+AC HH ++LG+ ++++ + P
Sbjct: 565 GCIVDLLGRAGMLDEAFHFIKKMPIEPNPVIWGSLLAACRVHHRMDLGKVIGQHIVNVAP 624
Query: 534 GSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEI 578
G ++L++NL W + RGLM R + K PG S V++
Sbjct: 625 NDVGVHVLVSNLHAEESQWDDVEHVRGLMGSRGIEKTPGHSSVQV 669
Score = 194 bits (492), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 134/474 (28%), Positives = 234/474 (49%), Gaps = 26/474 (5%)
Query: 37 LKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCS---DFVSSRKVLDEMPV 93
L ACA+ + +H +++ D+FV LI + + + D +RKV D M
Sbjct: 24 LDACASRAHL---AELHGRLVRAHLTSDSFVAGRLIALLASPAARHDMRYARKVFDGMA- 79
Query: 94 RLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTF------VSVVSGCSFR- 146
+ WN +I +S +A+ V +EM G+ T + +G +R
Sbjct: 80 -QPNAFVWNCMIRGYSSCEAPRDALAVFREMRRRGVSPDNYTMAAVVSASAAFAGLKWRS 138
Query: 147 QGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGY 206
G ++H V ++G +++ + + +++ Y F V EA +F+E+ E +VSWT++I
Sbjct: 139 NGDAIHALVRRIG-FTSDVFVMSGLVNYYGAFRSVEEASKVFEEMYERDVVSWTSMISAC 197
Query: 207 VNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNED 266
G+ ++ + ++M+ + P+ V ++L+ C Q + +++ + K G +
Sbjct: 198 AQCGHWDKVLKMLSEMQAEGIIPNKVTIISLLSACGQTQAVDEGRWVYNQVGKFGIEADV 257
Query: 267 PLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKT 326
+ N L+SMYTKCG L A F A+ + W ++I G+ Q EA+ +F+ +L
Sbjct: 258 DIRNALISMYTKCGCLSDALEAFQAMPARYTKSWNTLIDGFVQNHEHKEALRIFEEMLLH 317
Query: 327 SVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKA 386
V P+ TL + LSACA+LG L KG + YI NG+ + + SLI+M++KCG + A
Sbjct: 318 GVTPDGITLVSVLSACAQLGELRKGMHVHSYIKDNGICCDNILTNSLINMYAKCGDMAAA 377
Query: 387 KEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSH 446
+ VF+ + KD+ W+ M+ GY A NLF +M+ E + + + S+LSACS
Sbjct: 378 ERVFQTMTKKDVVSWTVMVCGYVKGHQFTMAFNLFEEMKIAEVVAHEMAL-VSLLSACSQ 436
Query: 447 SGMVDDGLSFFKSMQSNFGIEPSIEHYLC----LVDLLGRAGRFDLALKTIHEM 496
G +D G ++ E ++ LC LVD+ + G D A + +M
Sbjct: 437 LGALDKGREIHSYIE-----EMNVAKDLCLESALVDMYAKCGCIDTASEIFRKM 485
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/239 (28%), Positives = 122/239 (51%), Gaps = 6/239 (2%)
Query: 281 DLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLS 340
D+ AR+VFD + + + F+W MI GY+ P +A+ +F+ + + V P+ T+A +S
Sbjct: 67 DMRYARKVFDGMAQPNAFVWNCMIRGYSSCEAPRDALAVFREMRRRGVSPDNYTMAAVVS 126
Query: 341 ACAELGSL---SKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKD 397
A A L S G I + G S+ V + L++ + + +A +VFE + ++D
Sbjct: 127 ASAAFAGLKWRSNGDAIHALVRRIGFTSDVFVMSGLVNYYGAFRSVEEASKVFEEMYERD 186
Query: 398 LAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFF 457
+ W++MI+ A G D+ L + +MQ EG+ P+ V S+LSAC + VD+G +
Sbjct: 187 VVSWTSMISACAQCGHWDKVLKMLSEMQ-AEGIIPNKVTIISLLSACGQTQAVDEGRWVY 245
Query: 458 KSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHH 516
+ FGIE ++ L+ + + G AL+ MP + W L+ +++H
Sbjct: 246 NQV-GKFGIEADVDIRNALISMYTKCGCLSDALEAFQAMPARY-TKSWNTLIDGFVQNH 302
>gi|125527050|gb|EAY75164.1| hypothetical protein OsI_03056 [Oryza sativa Indica Group]
Length = 669
Score = 363 bits (932), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 202/585 (34%), Positives = 328/585 (56%), Gaps = 11/585 (1%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSI-W--DGKRVHSHVL 57
MIR ++ + + L+ + M + GV +++T V+ A A + W +G +H+ V
Sbjct: 89 MIRGYSSCEAPRDALAVFREMRRRGVSPDNYTMAAVVSASAAFAGLKWRSNGDAIHALVR 148
Query: 58 KVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEA 117
++GF D FV +GL++ Y + KV +EM R VVSW S+ISA ++ D+
Sbjct: 149 RIGFTSDVFVMSGLVNYYGAFRSVKEASKVFEEM--YERDVVSWTSMISACAQCGHWDKV 206
Query: 118 ILVLKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVY----KLGLLNNEIPLANSVMS 173
+ +L EM G+ + T +S++S C Q + VY K G+ ++ + N+++S
Sbjct: 207 LKMLSEMQAEGIIPNKVTIISLLSACGQTQAVDEGRWVYNQVGKFGI-EADVDIRNALIS 265
Query: 174 MYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVV 233
MY K G +++A F + SW T+I G+V EA + +M VTPD +
Sbjct: 266 MYTKCGCLSDALEAFQAMPARYTKSWNTLIDGFVQNHEHKEALRIFEEMLLHGVTPDGIT 325
Query: 234 FLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVL 293
++++ CAQ+G L + +HS + +G ++ L N L++MY KCGD+ A RVF +
Sbjct: 326 LVSVLSACAQLGELRKGMHVHSYIKDNGICCDNILTNSLINMYAKCGDMAAAERVFQTMT 385
Query: 294 EKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKE 353
+K V WT M+ GY + + A NLF+ + V +E L + LSAC++LG+L KG+E
Sbjct: 386 KKDVVSWTVMVCGYVKGHQFTMAFNLFEEMKIAEVVAHEMALVSLLSACSQLGALDKGRE 445
Query: 354 IEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGM 413
I YI + + ++++L+ M++KCG I+ A E+F ++ K W+AMI G A +G
Sbjct: 446 IHSYIEEMNVAKDLCLESALVDMYAKCGCIDTASEIFRKMQHKQTLSWNAMIGGLASNGY 505
Query: 414 GDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHY 473
G +A+ LF +M ++ KPD + ++L AC+H GMVD+GL +F M S+ G+ P EHY
Sbjct: 506 GKEAVELFDQMLELQDPKPDGITLKAVLGACAHVGMVDEGLRYFYLM-SSLGVVPDTEHY 564
Query: 474 LCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNP 533
C+VDLLGRAG D A I +MP+E +W LL+AC HH ++LG+ ++++ + P
Sbjct: 565 GCIVDLLGRAGMLDEAFHFIKKMPIEPNPVIWGSLLAACRVHHRMDLGKVIGQHIVNVAP 624
Query: 534 GSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEI 578
G ++L++NL W + RGLM R + K PG S V++
Sbjct: 625 NDVGVHVLVSNLHAEESQWDDVEHVRGLMGSRGIEKTPGHSSVQV 669
Score = 194 bits (492), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 134/474 (28%), Positives = 234/474 (49%), Gaps = 26/474 (5%)
Query: 37 LKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCS---DFVSSRKVLDEMPV 93
L ACA+ + +H +++ D+FV LI + + + D +RKV D M
Sbjct: 24 LDACASRAHL---AELHGRLVRAHLTSDSFVAGRLIALLASPAARHDMRYARKVFDGMA- 79
Query: 94 RLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTF------VSVVSGCSFR- 146
+ WN +I +S +A+ V +EM G+ T + +G +R
Sbjct: 80 -QPNAFVWNCMIRGYSSCEAPRDALAVFREMRRRGVSPDNYTMAAVVSASAAFAGLKWRS 138
Query: 147 QGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGY 206
G ++H V ++G +++ + + +++ Y F V EA +F+E+ E +VSWT++I
Sbjct: 139 NGDAIHALVRRIG-FTSDVFVMSGLVNYYGAFRSVKEASKVFEEMYERDVVSWTSMISAC 197
Query: 207 VNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNED 266
G+ ++ + ++M+ + P+ V ++L+ C Q + +++ + K G +
Sbjct: 198 AQCGHWDKVLKMLSEMQAEGIIPNKVTIISLLSACGQTQAVDEGRWVYNQVGKFGIEADV 257
Query: 267 PLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKT 326
+ N L+SMYTKCG L A F A+ + W ++I G+ Q EA+ +F+ +L
Sbjct: 258 DIRNALISMYTKCGCLSDALEAFQAMPARYTKSWNTLIDGFVQNHEHKEALRIFEEMLLH 317
Query: 327 SVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKA 386
V P+ TL + LSACA+LG L KG + YI NG+ + + SLI+M++KCG + A
Sbjct: 318 GVTPDGITLVSVLSACAQLGELRKGMHVHSYIKDNGICCDNILTNSLINMYAKCGDMAAA 377
Query: 387 KEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSH 446
+ VF+ + KD+ W+ M+ GY A NLF +M+ E + + + S+LSACS
Sbjct: 378 ERVFQTMTKKDVVSWTVMVCGYVKGHQFTMAFNLFEEMKIAEVVAHEMAL-VSLLSACSQ 436
Query: 447 SGMVDDGLSFFKSMQSNFGIEPSIEHYLC----LVDLLGRAGRFDLALKTIHEM 496
G +D G ++ E ++ LC LVD+ + G D A + +M
Sbjct: 437 LGALDKGREIHSYIE-----EMNVAKDLCLESALVDMYAKCGCIDTASEIFRKM 485
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/239 (28%), Positives = 122/239 (51%), Gaps = 6/239 (2%)
Query: 281 DLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLS 340
D+ AR+VFD + + + F+W MI GY+ P +A+ +F+ + + V P+ T+A +S
Sbjct: 67 DMRYARKVFDGMAQPNAFVWNCMIRGYSSCEAPRDALAVFREMRRRGVSPDNYTMAAVVS 126
Query: 341 ACAELGSL---SKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKD 397
A A L S G I + G S+ V + L++ + + +A +VFE + ++D
Sbjct: 127 ASAAFAGLKWRSNGDAIHALVRRIGFTSDVFVMSGLVNYYGAFRSVKEASKVFEEMYERD 186
Query: 398 LAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFF 457
+ W++MI+ A G D+ L + +MQ EG+ P+ V S+LSAC + VD+G +
Sbjct: 187 VVSWTSMISACAQCGHWDKVLKMLSEMQ-AEGIIPNKVTIISLLSACGQTQAVDEGRWVY 245
Query: 458 KSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHH 516
+ FGIE ++ L+ + + G AL+ MP + W L+ +++H
Sbjct: 246 NQV-GKFGIEADVDIRNALISMYTKCGCLSDALEAFQAMPARY-TKSWNTLIDGFVQNH 302
>gi|449488546|ref|XP_004158080.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21300-like [Cucumis sativus]
Length = 762
Score = 363 bits (932), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 205/621 (33%), Positives = 337/621 (54%), Gaps = 8/621 (1%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
M+ NG + + M + + NS TF VL CA+ + G ++H + G
Sbjct: 130 MLNGYVKNGDSGNAIKIFLEMRHSEIKPNSVTFACVLSVCASEAMLDLGTQLHGIAVGCG 189
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+ D+ V L+ MYSKC ++RK+ D +P +VSWN IIS + + L EA +
Sbjct: 190 LELDSPVANTLLAMYSKCQCLQAARKLFDTLPQS--DLVSWNGIISGYVQNGLMGEAEHL 247
Query: 121 LKEMWVLGLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
+ M G++ + TF S + S + +H + + ++ ++ L ++++ +Y
Sbjct: 248 FRGMISAGIKPDSITFASFLPCVNELLSLKHCKEIHGYIIRHAVVL-DVFLKSALIDIYF 306
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K V A+ + V TT+I GYV G EA + + + P V F +
Sbjct: 307 KCRDVEMAQKNLCQSSSFDTVVCTTMISGYVLNGKNKEALEAFRWLVQERMKPTSVTFSS 366
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
+ A + L L +H ++K+ + + + + ++ MY KCG L+LA RVF+ + EK
Sbjct: 367 IFPAFAGLAALNLGKELHGSIIKTKLDEKCHVGSAILDMYAKCGRLDLACRVFNRITEKD 426
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEE 356
W SMI +Q G P EA+NLF+++ R + +++ LSACA L +L GKEI
Sbjct: 427 AICWNSMITSCSQNGRPGEAINLFRQMGMEGTRYDCVSISGALSACANLPALHYGKEIHG 486
Query: 357 YIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQ 416
++ L S+ ++SLI M++KCG +N ++ VF+R+ +K+ W+++I+ Y HG +
Sbjct: 487 LMIKGPLRSDLYAESSLIDMYAKCGNLNFSRRVFDRMQEKNEVSWNSIISAYGNHGDLKE 546
Query: 417 ALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCL 476
L LF++M G++PD V + I+SAC H+G VD+G+ ++ M +GI +EHY C+
Sbjct: 547 CLALFHEMLR-NGIQPDHVTFLGIISACGHAGQVDEGIRYYHLMTEEYGIPARMEHYACV 605
Query: 477 VDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGST 536
D+ GRAGR A +TI+ MP A VW LL AC H NVEL E A+K+L L+P ++
Sbjct: 606 ADMFGRAGRLHEAFETINSMPFPPDAGVWGTLLGACHIHGNVELAEVASKHLFDLDPLNS 665
Query: 537 GNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSV 596
G Y+L+AN+ AG W++ R +M +R + K PG+S +E++ + +FVA D SH L+
Sbjct: 666 GYYVLLANVQAGAGKWRKVLKVRSIMKERGVRKVPGYSWIEVNNATHMFVAADGSHPLTA 725
Query: 597 DIRKTLKELHIKLLEAGYIAE 617
I L L ++L + GY+ +
Sbjct: 726 QIYSVLDSLLLELKKEGYVPQ 746
Score = 229 bits (583), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 152/528 (28%), Positives = 266/528 (50%), Gaps = 20/528 (3%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MIR T G F L Y ML GV + +TFP V+KAC + S+ GK VH V +G
Sbjct: 29 MIRGFTMMGQFNYALLFYLKMLGAGVSPDKYTFPYVVKACCGLKSVKMGKIVHETVNLMG 88
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
++D FV + LI +Y++ ++ + D +P + V WN +++ + + + AI +
Sbjct: 89 LKEDVFVGSSLIKLYAENGHLSDAQYLFDNIPQ--KDSVLWNVMLNGYVKNGDSGNAIKI 146
Query: 121 LKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
EM ++ ++ TF V+S C+ G +H G L + P+AN++++MY+
Sbjct: 147 FLEMRHSEIKPNSVTFACVLSVCASEAMLDLGTQLHGIAVGCG-LELDSPVANTLLAMYS 205
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K + AR +FD + ++ +VSW II GYV G + EA L M + PD + F +
Sbjct: 206 KCQCLQAARKLFDTLPQSDLVSWNGIISGYVQNGLMGEAEHLFRGMISAGIKPDSITFAS 265
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
+ ++ +L +H +++ + L + L+ +Y KC D+E+A++
Sbjct: 266 FLPCVNELLSLKHCKEIHGYIIRHAVVLDVFLKSALIDIYFKCRDVEMAQKNLCQSSSFD 325
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEE 356
+ T+MI GY G EA+ F+ L++ ++P T ++ A A L +L+ GKE+
Sbjct: 326 TVVCTTMISGYVLNGKNKEALEAFRWLVQERMKPTSVTFSSIFPAFAGLAALNLGKELHG 385
Query: 357 YIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQ 416
I+ L+ V ++++ M++KCGR++ A VF R+ +KD W++MI + +G +
Sbjct: 386 SIIKTKLDEKCHVGSAILDMYAKCGRLDLACRVFNRITEKDAICWNSMITSCSQNGRPGE 445
Query: 417 ALNLFYKMQHVEGLKPDAVVYTSILSACS-----HSGMVDDGLSFFKSMQSNFGIEPSIE 471
A+NLF +M +EG + D V + LSAC+ H G GL ++S+ E S
Sbjct: 446 AINLFRQMG-MEGTRYDCVSISGALSACANLPALHYGKEIHGLMIKGPLRSDLYAESS-- 502
Query: 472 HYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVE 519
L+D+ + G + + + M E W ++SA H +++
Sbjct: 503 ----LIDMYAKCGNLNFSRRVFDRMQ-EKNEVSWNSIISAYGNHGDLK 545
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 114/424 (26%), Positives = 213/424 (50%), Gaps = 8/424 (1%)
Query: 93 VRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGC----SFRQG 148
++L +WN +I + + A+L +M G+ TF VV C S + G
Sbjct: 18 LQLGCTSAWNWMIRGFTMMGQFNYALLFYLKMLGAGVSPDKYTFPYVVKACCGLKSVKMG 77
Query: 149 ISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVN 208
+H V +GL ++ + +S++ +YA+ G +++A+ +FD I + V W ++ GYV
Sbjct: 78 KIVHETVNLMGL-KEDVFVGSSLIKLYAENGHLSDAQYLFDNIPQKDSVLWNVMLNGYVK 136
Query: 209 VGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPL 268
G+ A + +MR + P+ V F ++ CA L L +H + + G + P+
Sbjct: 137 NGDSGNAIKIFLEMRHSEIKPNSVTFACVLSVCASEAMLDLGTQLHGIAVGCGLELDSPV 196
Query: 269 DNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSV 328
N L++MY+KC L+ AR++FD + + + W +I GY Q G EA +LF+ ++ +
Sbjct: 197 ANTLLAMYSKCQCLQAARKLFDTLPQSDLVSWNGIISGYVQNGLMGEAEHLFRGMISAGI 256
Query: 329 RPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKE 388
+P+ T A+ L EL SL KEI YI+ + + + ++++LI ++ KC + A++
Sbjct: 257 KPDSITFASFLPCVNELLSLKHCKEIHGYIIRHAVVLDVFLKSALIDIYFKCRDVEMAQK 316
Query: 389 VFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSG 448
+ D V + MI+GY ++G +AL F + E +KP +V ++SI A +
Sbjct: 317 NLCQSSSFDTVVCTTMISGYVLNGKNKEALEAFRWLVQ-ERMKPTSVTFSSIFPAFAGLA 375
Query: 449 MVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPL 508
++ G S+ ++ ++D+ + GR DLA + + + E A W +
Sbjct: 376 ALNLGKELHGSIIKT-KLDEKCHVGSAILDMYAKCGRLDLACRVFNRI-TEKDAICWNSM 433
Query: 509 LSAC 512
+++C
Sbjct: 434 ITSC 437
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 75/268 (27%), Positives = 137/268 (51%), Gaps = 1/268 (0%)
Query: 174 MYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVV 233
MY + G + +A+++F + +W +I G+ +G N A +M V+PD
Sbjct: 1 MYVRTGSLKDAKNLFYTLQLGCTSAWNWMIRGFTMMGQFNYALLFYLKMLGAGVSPDKYT 60
Query: 234 FLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVL 293
F ++ C + ++ + +H + G + + + L+ +Y + G L A+ +FD +
Sbjct: 61 FPYVVKACCGLKSVKMGKIVHETVNLMGLKEDVFVGSSLIKLYAENGHLSDAQYLFDNIP 120
Query: 294 EKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKE 353
+K LW M+ GY + G A+ +F + + ++PN T A LS CA L G +
Sbjct: 121 QKDSVLWNVMLNGYVKNGDSGNAIKIFLEMRHSEIKPNSVTFACVLSVCASEAMLDLGTQ 180
Query: 354 IEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGM 413
+ V GLE + V +L+ M+SKC + A+++F+ +P DL W+ +I+GY +G+
Sbjct: 181 LHGIAVGCGLELDSPVANTLLAMYSKCQCLQAARKLFDTLPQSDLVSWNGIISGYVQNGL 240
Query: 414 GDQALNLFYKMQHVEGLKPDAVVYTSIL 441
+A +LF M G+KPD++ + S L
Sbjct: 241 MGEAEHLFRGMISA-GIKPDSITFASFL 267
>gi|15218216|ref|NP_173004.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75191104|sp|Q9M9E2.1|PPR45_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g15510, chloroplastic; Flags: Precursor
gi|8072389|gb|AAF71977.1|AC013453_2 Hypothetical protein [Arabidopsis thaliana]
gi|300825685|gb|ADK35876.1| chloroplast vanilla cream 1 [Arabidopsis thaliana]
gi|332191210|gb|AEE29331.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 866
Score = 363 bits (932), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 213/613 (34%), Positives = 331/613 (53%), Gaps = 12/613 (1%)
Query: 6 TNNGSFEETLSTYSSMLQTG-VHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQD 64
G F+E + Y ML G V + +TFP VL+ C I + GK VH HV++ G++ D
Sbjct: 171 AKQGYFDEAMCLYHRMLWVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELD 230
Query: 65 AFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEM 124
V LI MY KC D S+R + D MP R ++SWN++IS + + E + + M
Sbjct: 231 IDVVNALITMYVKCGDVKSARLLFDRMP--RRDIISWNAMISGYFENGMCHEGLELFFAM 288
Query: 125 WVLGLELSASTFVSVVSGCSF----RQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGK 180
L ++ T SV+S C R G +H V G +I + NS+ MY G
Sbjct: 289 RGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAV-DISVCNSLTQMYLNAGS 347
Query: 181 VNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILG 240
EA +F + IVSWTT+I GY ++A M + SV PD + ++
Sbjct: 348 WREAEKLFSRMERKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSA 407
Query: 241 CAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLW 300
CA +G+L + +H L +K+ + + N L++MY+KC ++ A +F + K+V W
Sbjct: 408 CATLGDLDTGVELHKLAIKARLISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISW 467
Query: 301 TSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVL 360
TS+I G EA+ +F R +K +++PN TL L+ACA +G+L GKEI +++
Sbjct: 468 TSIIAGLRLNNRCFEAL-IFLRQMKMTLQPNAITLTAALAACARIGALMCGKEIHAHVLR 526
Query: 361 NGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNL 420
G+ + + +L+ M+ +CGR+N A F KD+ W+ ++ GY+ G G + L
Sbjct: 527 TGVGLDDFLPNALLDMYVRCGRMNTAWSQFNS-QKKDVTSWNILLTGYSERGQGSMVVEL 585
Query: 421 FYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLL 480
F +M ++PD + + S+L CS S MV GL +F M+ ++G+ P+++HY C+VDLL
Sbjct: 586 FDRMVKSR-VRPDEITFISLLCGCSKSQMVRQGLMYFSKME-DYGVTPNLKHYACVVDLL 643
Query: 481 GRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYI 540
GRAG A K I +MPV VW LL+AC HH ++LGE +A+++ L+ S G YI
Sbjct: 644 GRAGELQEAHKFIQKMPVTPDPAVWGALLNACRIHHKIDLGELSAQHIFELDKKSVGYYI 703
Query: 541 LMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRK 600
L+ NL+ G W+E A R +M + LT + G S VE+ G V F++ D+ H + +I
Sbjct: 704 LLCNLYADCGKWREVAKVRRMMKENGLTVDAGCSWVEVKGKVHAFLSDDKYHPQTKEINT 763
Query: 601 TLKELHIKLLEAG 613
L+ + K+ E G
Sbjct: 764 VLEGFYEKMSEVG 776
Score = 201 bits (510), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 142/510 (27%), Positives = 256/510 (50%), Gaps = 15/510 (2%)
Query: 8 NGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFV 67
NG EE + +SM + V + F +++ C + +G +V+S L +
Sbjct: 72 NGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMSSLGVEL 131
Query: 68 QTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEM-WV 126
+ M+ + + V + V +M R ++ SWN ++ +++ DEA+ + M WV
Sbjct: 132 GNAFLAMFVRFGNLVDAWYVFGKMSER--NLFSWNVLVGGYAKQGYFDEAMCLYHRMLWV 189
Query: 127 LGLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVN 182
G++ TF V+ C +G +H V + G +I + N++++MY K G V
Sbjct: 190 GGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGY-ELDIDVVNALITMYVKCGDVK 248
Query: 183 EARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCA 242
AR +FD + I+SW +I GY G +E L MR +SV PDL+ ++I C
Sbjct: 249 SARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACE 308
Query: 243 QVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTS 302
+G+ L +H+ ++ +G+ + + N L MY G A ++F + K + WT+
Sbjct: 309 LLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTT 368
Query: 303 MIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNG 362
MI GY P +A++ ++ + + SV+P+E T+A LSACA LG L G E+ + +
Sbjct: 369 MISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKAR 428
Query: 363 LESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFY 422
L S V +LI+M+SKC I+KA ++F +P K++ W+++I G ++ +AL
Sbjct: 429 LISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFLR 488
Query: 423 KMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKS-MQSNFGIEPSIEHYLCLVDLLG 481
+M+ L+P+A+ T+ L+AC+ G + G +++ G++ + + L+D+
Sbjct: 489 QMKMT--LQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPN--ALLDMYV 544
Query: 482 RAGRFDLALKTIHEMPVEVQAQVWAPLLSA 511
R GR + A + +V + W LL+
Sbjct: 545 RCGRMNTAWSQFNSQKKDVTS--WNILLTG 572
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 104/231 (45%), Gaps = 16/231 (6%)
Query: 311 GYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLES-NRQV 369
G EA+ L + + V +E + C + +G ++ I L+ + S ++
Sbjct: 73 GKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYS-IALSSMSSLGVEL 131
Query: 370 QTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEG 429
+ + MF + G + A VF ++ +++L W+ ++ GYA G D+A+ L+++M V G
Sbjct: 132 GNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGG 191
Query: 430 LKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSN---FGIEPSIEHYLCLVDLLGRAGRF 486
+KPD + +L C G+ D L+ K + + +G E I+ L+ + + G
Sbjct: 192 VKPDVYTFPCVLRTC--GGIPD--LARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDV 247
Query: 487 DLALKTIHEMPVEVQAQVWAPLLSAC----MKHHNVELGEYAAKNLLTLNP 533
A MP W ++S M H +EL + A L+++P
Sbjct: 248 KSARLLFDRMP-RRDIISWNAMISGYFENGMCHEGLEL--FFAMRGLSVDP 295
>gi|224060327|ref|XP_002300144.1| predicted protein [Populus trichocarpa]
gi|222847402|gb|EEE84949.1| predicted protein [Populus trichocarpa]
Length = 666
Score = 363 bits (932), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 193/532 (36%), Positives = 310/532 (58%), Gaps = 16/532 (3%)
Query: 98 VVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCS----FRQGISMHC 153
V SWNS+I+ +R + E++ M L ++ + STF + CS G H
Sbjct: 47 VYSWNSLIAELARGGDSCESLRAFSWMRKLDIKPNRSTFPCAIKSCSALFDLNSGKQAHQ 106
Query: 154 CVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVN 213
G +++ ++++++ MY+K GK++ AR +FDEI +IV+WT++I GYV + +
Sbjct: 107 QALVFGF-ESDLFVSSALIDMYSKCGKLSNARVLFDEIPRRNIVTWTSLITGYVQNDDAH 165
Query: 214 EAFGLCNQM---------RRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNN 264
EA + + + + D V ++++ C++V N ++ +H + +K G +
Sbjct: 166 EALMVFKEFLFEKSEGNGEEVGTSVDSVAMISVLSACSRVSNKAVSEGVHGVAIKVGLDK 225
Query: 265 EDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLL 324
++N L+ Y KCG++ L+R+VFD + EK V W SMI YAQ G ++A +F +L
Sbjct: 226 VMGVENTLLDAYAKCGEVSLSRKVFDDMAEKDVVSWNSMIAVYAQNGLSTDAFEVFHGML 285
Query: 325 KTSV-RPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRI 383
K + NE TL+T L ACA G+L G + + ++ G +N + TS+I M+ KCG+
Sbjct: 286 KAGGGKYNEVTLSTLLLACAHEGALRVGMCLHDQVIKMGYVNNVIMATSIIDMYCKCGQA 345
Query: 384 NKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSA 443
A+ F+ + +K++ W+AMI GY +HG +AL++FY+M G+KP+ + + S+L+A
Sbjct: 346 EMARNAFDGMKEKNVRSWTAMIAGYGMHGFAREALDVFYQMIWA-GVKPNYITFISVLAA 404
Query: 444 CSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQ 503
CSH+G +++G +F +M + +EP +EHY C+VDLLGRAG A I M V
Sbjct: 405 CSHAGFLEEGWRWFNAMSHEYNVEPGVEHYGCMVDLLGRAGYIKEAYNLIKSMKVRRDFV 464
Query: 504 VWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMD 563
+W LL+AC H +VEL E +A+ L L+P + G Y+L+AN++ AG WK+ R L+
Sbjct: 465 LWGSLLAACRIHKDVELAEISARELFKLDPSNCGYYVLLANIYADAGRWKDVERMRILVK 524
Query: 564 DRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKELHIKLLEAGYI 615
DR L K PG+S VE+ G V VF+ GD+ H I K L+EL +KL EAGY+
Sbjct: 525 DRGLVKPPGYSLVELKGRVHVFLVGDKEHPQHEKIYKYLEELSVKLQEAGYV 576
Score = 214 bits (546), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 130/432 (30%), Positives = 221/432 (51%), Gaps = 29/432 (6%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+I G E+L +S M + + N TFP +K+C+ + + GK+ H L G
Sbjct: 53 LIAELARGGDSCESLRAFSWMRKLDIKPNRSTFPCAIKSCSALFDLNSGKQAHQQALVFG 112
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F+ D FV + LIDMYSKC ++R + DE+P R++V+W S+I+ + + EA++V
Sbjct: 113 FESDLFVSSALIDMYSKCGKLSNARVLFDEIP--RRNIVTWTSLITGYVQNDDAHEALMV 170
Query: 121 LKEMWV---------LGLELSASTFVSVVSGCSF--RQGIS--MHCCVYKLGLLNNEIPL 167
KE +G + + +SV+S CS + +S +H K+G L+ + +
Sbjct: 171 FKEFLFEKSEGNGEEVGTSVDSVAMISVLSACSRVSNKAVSEGVHGVAIKVG-LDKVMGV 229
Query: 168 ANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSV 227
N+++ YAK G+V+ +R +FD++ E +VSW ++I Y G +AF + + M +
Sbjct: 230 ENTLLDAYAKCGEVSLSRKVFDDMAEKDVVSWNSMIAVYAQNGLSTDAFEVFHGMLKAGG 289
Query: 228 TP-DLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELAR 286
+ V L+L CA G L + + +H ++K GY N + ++ MY KCG E+AR
Sbjct: 290 GKYNEVTLSTLLLACAHEGALRVGMCLHDQVIKMGYVNNVIMATSIIDMYCKCGQAEMAR 349
Query: 287 RVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELG 346
FD + EK+V WT+MI GY G+ EA+++F +++ V+PN T + L+AC+ G
Sbjct: 350 NAFDGMKEKNVRSWTAMIAGYGMHGFAREALDVFYQMIWAGVKPNYITFISVLAACSHAG 409
Query: 347 SLSKGKEIEEYIVLNGLESNRQVQTSLIH---MFSKCGRINKAKEVFERVPD----KDLA 399
L +G + N + V+ + H M GR KE + + +D
Sbjct: 410 FLEEG-----WRWFNAMSHEYNVEPGVEHYGCMVDLLGRAGYIKEAYNLIKSMKVRRDFV 464
Query: 400 VWSAMINGYAIH 411
+W +++ IH
Sbjct: 465 LWGSLLAACRIH 476
Score = 133 bits (335), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 82/332 (24%), Positives = 161/332 (48%), Gaps = 11/332 (3%)
Query: 193 ETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALS 252
T + SW ++I G+ E+ + MR++ + P+ F I C+ + +L
Sbjct: 44 RTDVYSWNSLIAELARGGDSCESLRAFSWMRKLDIKPNRSTFPCAIKSCSALFDLNSGKQ 103
Query: 253 MHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGY 312
H L G+ ++ + + L+ MY+KCG L AR +FD + +++ WTS+I GY Q
Sbjct: 104 AHQQALVFGFESDLFVSSALIDMYSKCGKLSNARVLFDEIPRRNIVTWTSLITGYVQNDD 163
Query: 313 PSEAVNLFKRLLKTSVRPNEATLATT---------LSACAELGSLSKGKEIEEYIVLNGL 363
EA+ +FK L N + T+ LSAC+ + + + + + + GL
Sbjct: 164 AHEALMVFKEFLFEKSEGNGEEVGTSVDSVAMISVLSACSRVSNKAVSEGVHGVAIKVGL 223
Query: 364 ESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYK 423
+ V+ +L+ ++KCG ++ +++VF+ + +KD+ W++MI YA +G+ A +F+
Sbjct: 224 DKVMGVENTLLDAYAKCGEVSLSRKVFDDMAEKDVVSWNSMIAVYAQNGLSTDAFEVFHG 283
Query: 424 MQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRA 483
M G K + V +++L AC+H G + G+ + G ++ ++D+ +
Sbjct: 284 MLKAGGGKYNEVTLSTLLLACAHEGALRVGMCLHDQV-IKMGYVNNVIMATSIIDMYCKC 342
Query: 484 GRFDLALKTIHEMPVEVQAQVWAPLLSACMKH 515
G+ ++A M E + W +++ H
Sbjct: 343 GQAEMARNAFDGMK-EKNVRSWTAMIAGYGMH 373
>gi|347954520|gb|AEP33760.1| organelle transcript processing 82, partial [Capsella
bursa-pastoris]
Length = 706
Score = 363 bits (932), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 204/626 (32%), Positives = 346/626 (55%), Gaps = 47/626 (7%)
Query: 36 VLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDF---VSSRKVLDEMP 92
+L C + S+ + +H+ ++K G + + LI+ F + V D
Sbjct: 8 LLHNCKTLQSL---RIIHAKMIKTGLHNTNYALSKLIEFSVLSPHFDGLTYAISVFDS-- 62
Query: 93 VRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCS----FRQG 148
++ +++ WN++ H+ + A+ + M LGL ++ TF ++ C+ FR+G
Sbjct: 63 IQEPNLLIWNTMFRGHALSSDPVSALYLYVCMISLGLVPNSYTFPFLLKACAKSKAFREG 122
Query: 149 ISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFD------------------- 189
+H V KLG + ++ + S+++MY K G+ +AR +FD
Sbjct: 123 QQIHGHVLKLGC-DLDLYVHTSLIAMYVKNGRXEDARKVFDQSSHRDVVSYTALIKGYAS 181
Query: 190 ------------EIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNL 237
EI +VSW +I GY GN EA L +M + +V PD + +
Sbjct: 182 NGYIXSAQKMFDEIPVKDVVSWNALISGYAETGNYKEALELFKEMMKTNVKPDESTMVTV 241
Query: 238 ILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSV 297
+ CAQ ++ L +HS + G+ + + N L+ +Y KCG++E A +F+ + K V
Sbjct: 242 LSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETASGLFEGLSYKDV 301
Query: 298 FLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEY 357
W ++IGGY + EA+ LF+ +L++ PNE T+ + L ACA LG++ G+ I Y
Sbjct: 302 ISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNEVTMLSILPACAHLGAIDIGRWIHVY 361
Query: 358 I--VLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGD 415
I L G+ + ++TSLI M++KCG I A++VF+ + ++ L+ W+AMI G+A+HG +
Sbjct: 362 IDKRLKGVSNPSSLRTSLIDMYAKCGDIEAAQQVFDSMLNRSLSSWNAMIFGFAMHGRAN 421
Query: 416 QALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLC 475
A ++F +M+ +G++PD + + +LSACSHSGM+D G F+SM ++ I P +EHY C
Sbjct: 422 PAFDIFSRMRK-DGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTEDYKITPKLEHYGC 480
Query: 476 LVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGS 535
++DLLG +G F A + I+ M ++ +W LL AC H NVELGE A+NL+ + P +
Sbjct: 481 MIDLLGHSGLFKEAEEMINSMEMDPDGVIWCSLLKACKMHGNVELGESFAQNLIKIEPKN 540
Query: 536 TGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLS 595
+G+Y+L++N++ +AG W E A R L++D+ + K PG S +EID V F+ GD+ H +
Sbjct: 541 SGSYVLLSNIYATAGRWNEVAKRRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKLHPRN 600
Query: 596 VDIRKTLKELHIKLLEAGYIAEADIV 621
+I L+E+ + L EAG++ + V
Sbjct: 601 REIYGMLEEMEVLLEEAGFVPDTSEV 626
Score = 218 bits (555), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 136/441 (30%), Positives = 222/441 (50%), Gaps = 50/441 (11%)
Query: 15 LSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDM 74
L Y M+ G+ NS+TFP +LKACA + +G+++H HVLK+G D +V T LI M
Sbjct: 88 LYLYVCMISLGLVPNSYTFPFLLKACAKSKAFREGQQIHGHVLKLGCDLDLYVHTSLIAM 147
Query: 75 YSKCSDFVSSRKV-------------------------------LDEMPVRLRSVVSWNS 103
Y K +RKV DE+PV + VVSWN+
Sbjct: 148 YVKNGRXEDARKVFDQSSHRDVVSYTALIKGYASNGYIXSAQKMFDEIPV--KDVVSWNA 205
Query: 104 IISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGC----SFRQGISMHCCVYKLG 159
+IS ++ EA+ + KEM ++ ST V+V+S C S G +H + G
Sbjct: 206 LISGYAETGNYKEALELFKEMMKTNVKPDESTMVTVLSACAQSASIELGRQVHSWIDDHG 265
Query: 160 LLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLC 219
+N + + N+++ +Y K G+V A +F+ + ++SW T+IGGY ++ EA L
Sbjct: 266 FGSN-LKIVNALIDLYIKCGEVETASGLFEGLSYKDVISWNTLIGGYTHMNLYKEALLLF 324
Query: 220 NQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLK--SGYNNEDPLDNLLVSMYT 277
+M R +P+ V L+++ CA +G + + +H + K G +N L L+ MY
Sbjct: 325 QEMLRSGESPNEVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVSNPSSLRTSLIDMYA 384
Query: 278 KCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLAT 337
KCGD+E A++VFD++L +S+ W +MI G+A G + A ++F R+ K + P++ T
Sbjct: 385 KCGDIEAAQQVFDSMLNRSLSSWNAMIFGFAMHGRANPAFDIFSRMRKDGIEPDDITFVG 444
Query: 338 TLSACAELGSLSKGKEI-----EEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFER 392
LSAC+ G L G+ I E+Y + LE +I + G +A+E+
Sbjct: 445 LLSACSHSGMLDLGRHIFRSMTEDYKITPKLEH----YGCMIDLLGHSGLFKEAEEMINS 500
Query: 393 VP-DKDLAVWSAMINGYAIHG 412
+ D D +W +++ +HG
Sbjct: 501 MEMDPDGVIWCSLLKACKMHG 521
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 113/397 (28%), Positives = 186/397 (46%), Gaps = 40/397 (10%)
Query: 137 VSVVSGCSFRQGISM-HCCVYKLGLLNNEIPLAN----SVMSMYAKFGKVNEARSIFDEI 191
+S++ C Q + + H + K GL N L+ SV+S + F + A S+FD I
Sbjct: 6 LSLLHNCKTLQSLRIIHAKMIKTGLHNTNYALSKLIEFSVLSPH--FDGLTYAISVFDSI 63
Query: 192 GETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLAL 251
E +++ W T+ G+ + A L M + + P+ F L+ CA+
Sbjct: 64 QEPNLLIWNTMFRGHALSSDPVSALYLYVCMISLGLVPNSYTFPFLLKACAKSKAFREGQ 123
Query: 252 SMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDA-------------------- 291
+H +LK G + + + L++MY K G E AR+VFD
Sbjct: 124 QIHGHVLKLGCDLDLYVHTSLIAMYVKNGRXEDARKVFDQSSHRDVVSYTALIKGYASNG 183
Query: 292 -----------VLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLS 340
+ K V W ++I GYA+ G EA+ LFK ++KT+V+P+E+T+ T LS
Sbjct: 184 YIXSAQKMFDEIPVKDVVSWNALISGYAETGNYKEALELFKEMMKTNVKPDESTMVTVLS 243
Query: 341 ACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAV 400
ACA+ S+ G+++ +I +G SN ++ +LI ++ KCG + A +FE + KD+
Sbjct: 244 ACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETASGLFEGLSYKDVIS 303
Query: 401 WSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSM 460
W+ +I GY + +AL LF +M G P+ V SIL AC+H G +D G +
Sbjct: 304 WNTLIGGYTHMNLYKEALLLFQEMLR-SGESPNEVTMLSILPACAHLGAIDIGRWIHVYI 362
Query: 461 QSNF-GIEPSIEHYLCLVDLLGRAGRFDLALKTIHEM 496
G+ L+D+ + G + A + M
Sbjct: 363 DKRLKGVSNPSSLRTSLIDMYAKCGDIEAAQQVFDSM 399
>gi|356514087|ref|XP_003525738.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g01580-like [Glycine max]
Length = 701
Score = 363 bits (931), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 205/622 (32%), Positives = 334/622 (53%), Gaps = 12/622 (1%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGV---HGNSFTFPLVLKACANINSIWDGKRVHSHVL 57
++R+ G + ETLS + M V +++T + LK+C+ + + GK +H L
Sbjct: 73 LLRSYFLEGKWVETLSLFHQMNADAVTEERPDNYTVSIALKSCSGLQKLELGKMIHG-FL 131
Query: 58 KVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEA 117
K D FV + LI++YSKC + KV E P VV W SII+ + + + A
Sbjct: 132 KKKIDSDMFVGSALIELYSKCGQMNDAVKVFTEYPKP--DVVLWTSIITGYEQNGSPELA 189
Query: 118 ILVLKEMWVL-GLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVM 172
+ M VL + T VS S C+ F G S+H V + G + ++ LANS++
Sbjct: 190 LAFFSRMVVLEQVSPDPVTLVSAASACAQLSDFNLGRSVHGFVKRRGF-DTKLCLANSIL 248
Query: 173 SMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLV 232
++Y K G + A ++F E+ I+SW++++ Y + G A L N+M + + V
Sbjct: 249 NLYGKTGSIRIAANLFREMPYKDIISWSSMVACYADNGAETNALNLFNEMIDKRIELNRV 308
Query: 233 VFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAV 292
++ + CA NL +H L + G+ + + L+ MY KC E A +F+ +
Sbjct: 309 TVISALRACASSSNLEEGKQIHKLAVNYGFELDITVSTALMDMYLKCFSPENAIELFNRM 368
Query: 293 LEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGK 352
+K V W + GYA++G +++ +F +L RP+ L L+A +ELG + +
Sbjct: 369 PKKDVVSWAVLFSGYAEIGMAHKSLGVFCNMLSNGTRPDAIALVKILAASSELGIVQQAL 428
Query: 353 EIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHG 412
+ ++ +G ++N + SLI +++KC I+ A +VF+ + D+ WS++I Y HG
Sbjct: 429 CLHAFVTKSGFDNNEFIGASLIELYAKCSSIDNANKVFKGLRHTDVVTWSSIIAAYGFHG 488
Query: 413 MGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEH 472
G++AL L ++M + +KP+ V + SILSACSH+G++++G+ F M + + + P+IEH
Sbjct: 489 QGEEALKLSHQMSNHSDVKPNDVTFVSILSACSHAGLIEEGIKMFHVMVNEYQLMPNIEH 548
Query: 473 YLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLN 532
Y +VDLLGR G D AL I+ MP++ VW LL AC H N+++GE AA NL L+
Sbjct: 549 YGIMVDLLGRMGELDKALDMINNMPMQAGPHVWGALLGACRIHQNIKIGELAALNLFLLD 608
Query: 533 PGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSH 592
P G Y L++N++ W +AA R L+ + RL K G S VEI V F+A DR H
Sbjct: 609 PNHAGYYTLLSNIYCVDKNWHDAAKLRTLIKENRLKKIVGQSMVEIKNEVHSFIASDRFH 668
Query: 593 HLSVDIRKTLKELHIKLLEAGY 614
S I + L++L ++ E GY
Sbjct: 669 GESDQIYEMLRKLDARMREEGY 690
Score = 194 bits (494), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 125/427 (29%), Positives = 225/427 (52%), Gaps = 16/427 (3%)
Query: 36 VLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRL 95
+L+ C + SI ++HS LKVG D+FV T L +Y++ + + K+ +E P
Sbjct: 10 LLETCCSKISI---TQLHSQCLKVGLALDSFVVTKLNVLYARYASLCHAHKLFEETPC-- 64
Query: 96 RSVVSWNSIISAHSRACLNDEAILVLKEMWVLGL--ELSASTFVSV-VSGCSFRQGISMH 152
++V WN+++ ++ E + + +M + E + VS+ + CS Q + +
Sbjct: 65 KTVYLWNALLRSYFLEGKWVETLSLFHQMNADAVTEERPDNYTVSIALKSCSGLQKLELG 124
Query: 153 CCVYKLGLLNNEIP----LANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVN 208
++ G L +I + ++++ +Y+K G++N+A +F E + +V WT+II GY
Sbjct: 125 KMIH--GFLKKKIDSDMFVGSALIELYSKCGQMNDAVKVFTEYPKPDVVLWTSIITGYEQ 182
Query: 209 VGNVNEAFGLCNQMRRM-SVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDP 267
G+ A ++M + V+PD V ++ CAQ+ + L S+H + + G++ +
Sbjct: 183 NGSPELALAFFSRMVVLEQVSPDPVTLVSAASACAQLSDFNLGRSVHGFVKRRGFDTKLC 242
Query: 268 LDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTS 327
L N ++++Y K G + +A +F + K + W+SM+ YA G + A+NLF ++
Sbjct: 243 LANSILNLYGKTGSIRIAANLFREMPYKDIISWSSMVACYADNGAETNALNLFNEMIDKR 302
Query: 328 VRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAK 387
+ N T+ + L ACA +L +GK+I + V G E + V T+L+ M+ KC A
Sbjct: 303 IELNRVTVISALRACASSSNLEEGKQIHKLAVNYGFELDITVSTALMDMYLKCFSPENAI 362
Query: 388 EVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHS 447
E+F R+P KD+ W+ + +GYA GM ++L +F M G +PDA+ IL+A S
Sbjct: 363 ELFNRMPKKDVVSWAVLFSGYAEIGMAHKSLGVFCNMLS-NGTRPDAIALVKILAASSEL 421
Query: 448 GMVDDGL 454
G+V L
Sbjct: 422 GIVQQAL 428
Score = 45.4 bits (106), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 36/162 (22%), Positives = 77/162 (47%), Gaps = 5/162 (3%)
Query: 362 GLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLF 421
GL + V T L ++++ + A ++FE P K + +W+A++ Y + G + L+LF
Sbjct: 31 GLALDSFVVTKLNVLYARYASLCHAHKLFEETPCKTVYLWNALLRSYFLEGKWVETLSLF 90
Query: 422 YKM--QHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDL 479
++M V +PD + L +CS ++ G ++ I+ + L++L
Sbjct: 91 HQMNADAVTEERPDNYTVSIALKSCSGLQKLELGKMIHGFLKKK--IDSDMFVGSALIEL 148
Query: 480 LGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELG 521
+ G+ + A+K E P + +W +++ ++ + EL
Sbjct: 149 YSKCGQMNDAVKVFTEYP-KPDVVLWTSIITGYEQNGSPELA 189
>gi|357468471|ref|XP_003604520.1| Coatomer subunit beta'-2 [Medicago truncatula]
gi|355505575|gb|AES86717.1| Coatomer subunit beta'-2 [Medicago truncatula]
Length = 1033
Score = 363 bits (931), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 204/631 (32%), Positives = 333/631 (52%), Gaps = 13/631 (2%)
Query: 1 MIRNSTNNGSFEETLSTYSSM-LQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKV 59
+I N + E L +S+M + +G+ + F + LKACA +++ G+ +H +K
Sbjct: 121 LIAGYVNAANSNEALILFSNMWVDSGLQKDQFVVSVALKACALGMNVYFGELLHGFSVKS 180
Query: 60 GFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAIL 119
G FV + L+DMY K V + M R +VVSW ++I A + + +
Sbjct: 181 GLINSVFVSSALVDMYMKVGKTEQGCSVFENMTTR--NVVSWTAVIVGLVHAGCSLDGLS 238
Query: 120 VLKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMY 175
EMW + + TF + + G ++H K G N + N++ +MY
Sbjct: 239 YFSEMWRSKVGYDSHTFAVALKASAESGLLHYGKAIHAQTIKQGF-NETAYVVNTLGTMY 297
Query: 176 AKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFL 235
+K K + +F ++ +VSWT +I YV +G+ A +MR+ V+P+ F
Sbjct: 298 SKCRKPDYVMRLFGKMSTPDVVSWTNLIMTYVQMGDEERALDAFKRMRKSDVSPNEYTFA 357
Query: 236 NLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEK 295
++I CA + +H L+ G + + N ++++Y+KCG L+ A VFD + K
Sbjct: 358 SVISACANLAITKWGEQIHGHALRLGLVDALSVSNSIITLYSKCGLLQEASLVFDGMTRK 417
Query: 296 SVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIE 355
+ W+++I Y Q + EA N + + +PNE LA+ LS C + L GK++
Sbjct: 418 DIISWSTIISVYCQGSHAKEAFNYLSWMSREGPKPNEFALASVLSVCGSMALLEPGKQVH 477
Query: 356 EYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGD 415
Y + GL+ V ++LI M+S+ G + +A ++F+ + + D+ W+AMINGYA HG
Sbjct: 478 AYALCIGLDHETMVHSALISMYSRSGNLQEASKIFDSIKNNDIVSWTAMINGYAEHGYSQ 537
Query: 416 QALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLC 475
+A++LF + V GL PD V + IL+AC+H+G+VD G ++K M + + I PS EHY C
Sbjct: 538 EAISLFENISSV-GLMPDYVTFIGILTACNHAGLVDLGFYYYKLMTNEYQIAPSKEHYGC 596
Query: 476 LVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGS 535
++DLL RAGR A + MP VW+ LL AC H +++ +AA+ +L L+P S
Sbjct: 597 IIDLLCRAGRLSEAEHMVRNMPFPCDDVVWSTLLRACRDHGDLDRAIWAAEQMLRLHPNS 656
Query: 536 TGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLS 595
G +I +AN+++++G +EAA R LM + + KEPGWS + + + FVAG +SH LS
Sbjct: 657 AGAHITLANIYSASGRREEAAHVRKLMKSKGVIKEPGWSWINSNDQLNTFVAGVQSHPLS 716
Query: 596 VDIRKTLKELHIKL----LEAGYIAEADIVP 622
I L+ L + L+ G I E D P
Sbjct: 717 KQITTILELLRTSIGDARLDFGSIVEDDATP 747
Score = 177 bits (449), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 118/429 (27%), Positives = 207/429 (48%), Gaps = 12/429 (2%)
Query: 30 SFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLD 89
++ +P C ++ IW GK + + L + K +R + +
Sbjct: 52 NYVYPGTATECRDM--IWQGKPEQRAPTAYYVPNMPELNSQLKQLM-KLGKICEARDMFN 108
Query: 90 EMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWV-LGLELSASTFVSVVSGCSFRQG 148
+M R +SW ++I+ + A ++EA+++ MWV GL+ + C+
Sbjct: 109 KM--SHRDEISWTNLIAGYVNAANSNEALILFSNMWVDSGLQKDQFVVSVALKACALGMN 166
Query: 149 IS----MHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIG 204
+ +H K GL+N+ + ++++++ MY K GK + S+F+ + ++VSWT +I
Sbjct: 167 VYFGELLHGFSVKSGLINS-VFVSSALVDMYMKVGKTEQGCSVFENMTTRNVVSWTAVIV 225
Query: 205 GYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNN 264
G V+ G + ++M R V D F + A+ G L ++H+ +K G+N
Sbjct: 226 GLVHAGCSLDGLSYFSEMWRSKVGYDSHTFAVALKASAESGLLHYGKAIHAQTIKQGFNE 285
Query: 265 EDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLL 324
+ N L +MY+KC + R+F + V WT++I Y Q+G A++ FKR+
Sbjct: 286 TAYVVNTLGTMYSKCRKPDYVMRLFGKMSTPDVVSWTNLIMTYVQMGDEERALDAFKRMR 345
Query: 325 KTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRIN 384
K+ V PNE T A+ +SACA L G++I + + GL V S+I ++SKCG +
Sbjct: 346 KSDVSPNEYTFASVISACANLAITKWGEQIHGHALRLGLVDALSVSNSIITLYSKCGLLQ 405
Query: 385 KAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSAC 444
+A VF+ + KD+ WS +I+ Y +A N M EG KP+ S+LS C
Sbjct: 406 EASLVFDGMTRKDIISWSTIISVYCQGSHAKEAFNYLSWMSR-EGPKPNEFALASVLSVC 464
Query: 445 SHSGMVDDG 453
+++ G
Sbjct: 465 GSMALLEPG 473
>gi|326529685|dbj|BAK04789.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 879
Score = 363 bits (931), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 202/631 (32%), Positives = 339/631 (53%), Gaps = 20/631 (3%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
M+ N + + + M+ +GV N F F V+ AC + G++VH+ V++ G
Sbjct: 173 MMSAFVKNDRCSDAVELFGEMVWSGVRPNEFGFSCVVNACTGSRDLEAGRKVHAMVVRTG 232
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+ +D F L+DMYSK D + V ++P VVSWN+ IS + A+ +
Sbjct: 233 YDKDVFTANALVDMYSKLGDIHMAALVFGKVPKT--DVVSWNAFISGCVLHGHDQHALEL 290
Query: 121 LKEMWVLGLELSASTFVSVVSGCSF---------RQ--GISMHCCVYKLGLLNNEIPLAN 169
L +M GL + T S++ C+ RQ G + C +++ +
Sbjct: 291 LLQMKSSGLVPNVFTLSSILKACAGAGAGAFALGRQIHGFMIKACA------DSDDYIGV 344
Query: 170 SVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTP 229
+++ MYAK+G +++AR +F+ I ++ W +I G + G E+ L +MR+
Sbjct: 345 ALVDMYAKYGLLDDARKVFEWIPRKDLLLWNALISGCSHGGCHGESLSLFCRMRKEGSDI 404
Query: 230 DLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVF 289
+ ++ A + + +H+L K G+ ++ + N L+ Y KC L A +VF
Sbjct: 405 NRTTLAAVLKSTASLEAISDTTQVHALAEKIGFLSDSHVVNGLIDSYWKCNCLRYANKVF 464
Query: 290 DAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLS 349
+ ++ +TSMI +Q + +A+ LF +L+ + P+ L++ L+ACA L +
Sbjct: 465 EEHSSDNIIAFTSMITALSQCDHGEDAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYE 524
Query: 350 KGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYA 409
+GK++ +++ ++ +L++ ++KCG I A F +PDK + WSAMI G A
Sbjct: 525 QGKQVHAHLIKRKFMTDVFAGNALVYTYAKCGSIEDADLAFSGLPDKGVVSWSAMIGGLA 584
Query: 410 IHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPS 469
HG G +AL++F +M E + P+ + TS+L AC+H+G+VD+ +F SM+ FGI+ +
Sbjct: 585 QHGHGKRALDVFRRMVD-ERIAPNHITLTSVLCACNHAGLVDEAKGYFSSMKEMFGIDRT 643
Query: 470 IEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLL 529
EHY C++DLLGRAG+ D A++ ++ MP E A VW LL+A H + ELG+ AA+ L
Sbjct: 644 EEHYSCMIDLLGRAGKLDDAMELVNSMPFEANAAVWGALLAASRVHRDPELGKLAAEKLF 703
Query: 530 TLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGD 589
L P +G ++L+AN + SAGMW E A R LM D ++ KEP S VE+ V F+ GD
Sbjct: 704 VLEPEKSGTHVLLANTYASAGMWDEVAKVRKLMKDSKVKKEPAMSWVELKDRVHTFIVGD 763
Query: 590 RSHHLSVDIRKTLKELHIKLLEAGYIAEADI 620
+SH + DI L+EL + +AGY+ ++
Sbjct: 764 KSHPRARDIYAKLEELGDLMSKAGYVPNLEV 794
Score = 193 bits (490), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 133/451 (29%), Positives = 226/451 (50%), Gaps = 12/451 (2%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
++ +NN E L+ + +M GV N F P+VLK CA + G +VH+ + G
Sbjct: 74 LVTAYSNNALPREALAAFRAMRARGVRCNEFALPIVLK-CAPDAGL--GVQVHAVAVSTG 130
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
D FV L+ MY +R+V DE R R+ VSWN ++SA + +A+ +
Sbjct: 131 LSGDIFVANALVAMYGGFGFVDEARRVFDE-AARDRNAVSWNGMMSAFVKNDRCSDAVEL 189
Query: 121 LKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
EM G+ + F VV+ C+ G +H V + G + ++ AN+++ MY+
Sbjct: 190 FGEMVWSGVRPNEFGFSCVVNACTGSRDLEAGRKVHAMVVRTG-YDKDVFTANALVDMYS 248
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K G ++ A +F ++ +T +VSW I G V G+ A L QM+ + P++ +
Sbjct: 249 KLGDIHMAALVFGKVPKTDVVSWNAFISGCVLHGHDQHALELLLQMKSSGLVPNVFTLSS 308
Query: 237 LI--LGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLE 294
++ A G L +H ++K+ +++D + LV MY K G L+ AR+VF+ +
Sbjct: 309 ILKACAGAGAGAFALGRQIHGFMIKACADSDDYIGVALVDMYAKYGLLDDARKVFEWIPR 368
Query: 295 KSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEI 354
K + LW ++I G + G E+++LF R+ K N TLA L + A L ++S ++
Sbjct: 369 KDLLLWNALISGCSHGGCHGESLSLFCRMRKEGSDINRTTLAAVLKSTASLEAISDTTQV 428
Query: 355 EEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMG 414
G S+ V LI + KC + A +VFE ++ +++MI + G
Sbjct: 429 HALAEKIGFLSDSHVVNGLIDSYWKCNCLRYANKVFEEHSSDNIIAFTSMITALSQCDHG 488
Query: 415 DQALNLFYKMQHVEGLKPDAVVYTSILSACS 445
+ A+ LF +M +GL+PD V +S+L+AC+
Sbjct: 489 EDAIKLFMEMLR-KGLEPDPFVLSSLLNACA 518
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 120/397 (30%), Positives = 217/397 (54%), Gaps = 12/397 (3%)
Query: 34 PLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPV 93
PL+ + A S++ G +H+H+LK G AF + L+ YSKC S+R+V DE P
Sbjct: 9 PLLTRYAAT-QSLFLGAHIHAHLLKSGLLH-AF-RNHLLSFYSKCRLPGSARRVFDETPD 65
Query: 94 RLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCSFRQ--GISM 151
VSW+S+++A+S L EA+ + M G+ + + +V C+ G+ +
Sbjct: 66 PCH--VSWSSLVTAYSNNALPREALAAFRAMRARGVRCNEFA-LPIVLKCAPDAGLGVQV 122
Query: 152 HCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIG-ETSIVSWTTIIGGYVNVG 210
H G L+ +I +AN++++MY FG V+EAR +FDE + + VSW ++ +V
Sbjct: 123 HAVAVSTG-LSGDIFVANALVAMYGGFGFVDEARRVFDEAARDRNAVSWNGMMSAFVKND 181
Query: 211 NVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDN 270
++A L +M V P+ F ++ C +L +H++++++GY+ + N
Sbjct: 182 RCSDAVELFGEMVWSGVRPNEFGFSCVVNACTGSRDLEAGRKVHAMVVRTGYDKDVFTAN 241
Query: 271 LLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRP 330
LV MY+K GD+ +A VF V + V W + I G G+ A+ L ++ + + P
Sbjct: 242 ALVDMYSKLGDIHMAALVFGKVPKTDVVSWNAFISGCVLHGHDQHALELLLQMKSSGLVP 301
Query: 331 NEATLATTLS--ACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKE 388
N TL++ L A A G+ + G++I +++ +S+ + +L+ M++K G ++ A++
Sbjct: 302 NVFTLSSILKACAGAGAGAFALGRQIHGFMIKACADSDDYIGVALVDMYAKYGLLDDARK 361
Query: 389 VFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQ 425
VFE +P KDL +W+A+I+G + G ++L+LF +M+
Sbjct: 362 VFEWIPRKDLLLWNALISGCSHGGCHGESLSLFCRMR 398
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 109/370 (29%), Positives = 180/370 (48%), Gaps = 16/370 (4%)
Query: 148 GISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYV 207
G +H + K GLL+ N ++S Y+K AR +FDE + VSW++++ Y
Sbjct: 23 GAHIHAHLLKSGLLH---AFRNHLLSFYSKCRLPGSARRVFDETPDPCHVSWSSLVTAYS 79
Query: 208 NVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDP 267
N EA MR V + L ++L CA + L + +H++ + +G + +
Sbjct: 80 NNALPREALAAFRAMRARGVRCNEFA-LPIVLKCAP--DAGLGVQVHAVAVSTGLSGDIF 136
Query: 268 LDNLLVSMYTKCGDLELARRVFD-AVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKT 326
+ N LV+MY G ++ ARRVFD A +++ W M+ + + S+AV LF ++ +
Sbjct: 137 VANALVAMYGGFGFVDEARRVFDEAARDRNAVSWNGMMSAFVKNDRCSDAVELFGEMVWS 196
Query: 327 SVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKA 386
VRPNE + ++AC L G+++ +V G + + +L+ M+SK G I+ A
Sbjct: 197 GVRPNEFGFSCVVNACTGSRDLEAGRKVHAMVVRTGYDKDVFTANALVDMYSKLGDIHMA 256
Query: 387 KEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSH 446
VF +VP D+ W+A I+G +HG AL L +M+ GL P+ +SIL AC+
Sbjct: 257 ALVFGKVPKTDVVSWNAFISGCVLHGHDQHALELLLQMKS-SGLVPNVFTLSSILKACAG 315
Query: 447 SGMVDDGLSFFKSMQSNFGIEPSI--EHYL--CLVDLLGRAGRFDLALKTIHEMPVEVQA 502
+G F I+ + Y+ LVD+ + G D A K +P +
Sbjct: 316 AGAG---AFALGRQIHGFMIKACADSDDYIGVALVDMYAKYGLLDDARKVFEWIPRK-DL 371
Query: 503 QVWAPLLSAC 512
+W L+S C
Sbjct: 372 LLWNALISGC 381
>gi|297849104|ref|XP_002892433.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338275|gb|EFH68692.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 741
Score = 363 bits (931), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 201/631 (31%), Positives = 343/631 (54%), Gaps = 57/631 (9%)
Query: 36 VLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMP--- 92
+L C + S+ + +H+ ++K G + + L+++ F D +P
Sbjct: 39 LLHNCKTLQSL---RLIHAQMIKTGLHNTNYALSKLLELCVISPHF-------DGLPYAI 88
Query: 93 -----VRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCS--- 144
++ +++ WN++ H+ + A+ + M LGL ++ TF ++ C+
Sbjct: 89 SVFETIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAKSK 148
Query: 145 -FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFD-------------- 189
F++G +H V KLG + ++ + S++S+Y + G++ +AR +FD
Sbjct: 149 AFKEGQQIHGHVLKLGY-DLDLFVHTSLISVYVQNGRLEDARKVFDRSPHRDVVSYTALI 207
Query: 190 -----------------EIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLV 232
EI +VSW +I GY GN EA L +M + ++ PD
Sbjct: 208 KGYASRGYIESAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKEMMKTNIRPDES 267
Query: 233 VFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAV 292
+ ++ CAQ G++ L +HS + G+ + + N L+ +Y+KCG+LE A +F+ +
Sbjct: 268 TMVTVVSACAQSGSIELGRQVHSWIDDHGFGSNLKIVNSLMDLYSKCGELETACGLFEGL 327
Query: 293 LEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGK 352
L K V W ++IGGY + EA+ LF+ +L++ RPN+ T+ + L ACA LG++ G+
Sbjct: 328 LYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGERPNDVTMLSILPACAHLGAIDIGR 387
Query: 353 EIEEYI--VLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAI 410
I YI L + ++TSLI M++KCG I A +VF + K L+ W+AMI G+A+
Sbjct: 388 WIHVYIDKRLKSATNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAM 447
Query: 411 HGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSI 470
HG D A ++F +M+ + G++PD + + +LSACS SGM+D G F++M ++ I P +
Sbjct: 448 HGRADAAFDIFSRMRKI-GIEPDDITFVGLLSACSRSGMLDLGRHIFRTMTQDYKITPKL 506
Query: 471 EHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLT 530
EHY C++DLLG +G F A + I+ M +E +W LL AC NVELGE A+NL+
Sbjct: 507 EHYGCMIDLLGHSGLFKEAEEMINNMEMEPDGVIWCSLLKACKIRGNVELGESFAQNLIK 566
Query: 531 LNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDR 590
+ P + G Y+L++N++ +AG W E A R L++D+ + K PG S +EID V F+ GD+
Sbjct: 567 IEPENPGCYVLLSNIYATAGRWNEVAKIRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDK 626
Query: 591 SHHLSVDIRKTLKELHIKLLEAGYIAEADIV 621
H + +I L+E+ + L +AG++ + V
Sbjct: 627 FHPRNREIYGMLEEMEVLLEKAGFVPDTSEV 657
Score = 221 bits (564), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 152/514 (29%), Positives = 244/514 (47%), Gaps = 76/514 (14%)
Query: 15 LSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDM 74
L Y M+ G+ NS+TFP +LK+CA + +G+++H HVLK+G+ D FV T LI +
Sbjct: 119 LKLYVCMISLGLLPNSYTFPFLLKSCAKSKAFKEGQQIHGHVLKLGYDLDLFVHTSLISV 178
Query: 75 YSKCSDFVSSRKVLDEMPVR-----------------------------LRSVVSWNSII 105
Y + +RKV D P R ++ VVSWN++I
Sbjct: 179 YVQNGRLEDARKVFDRSPHRDVVSYTALIKGYASRGYIESAQKLFDEIPVKDVVSWNAMI 238
Query: 106 SAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLL 161
S ++ EA+ + KEM + ST V+VVS C S G +H + G
Sbjct: 239 SGYAETGNYKEALELFKEMMKTNIRPDESTMVTVVSACAQSGSIELGRQVHSWIDDHGFG 298
Query: 162 NNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQ 221
+N + + NS+M +Y+K G++ A +F+ + ++SW T+IGGY ++ EA L +
Sbjct: 299 SN-LKIVNSLMDLYSKCGELETACGLFEGLLYKDVISWNTLIGGYTHMNLYKEALLLFQE 357
Query: 222 MRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLL---LKSGYNNEDPLDNLLVSMYTK 278
M R P+ V L+++ CA +G + + +H + LKS N L L+ MY K
Sbjct: 358 MLRSGERPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKSA-TNASSLRTSLIDMYAK 416
Query: 279 CGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATT 338
CGD+E A +VF+++L KS+ W +MI G+A G A ++F R+ K + P++ T
Sbjct: 417 CGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADAAFDIFSRMRKIGIEPDDITFVGL 476
Query: 339 LSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDL 398
LSAC+ G L G+ I + + ++ L H
Sbjct: 477 LSACSRSGMLDLGRHI-----FRTMTQDYKITPKLEH----------------------- 508
Query: 399 AVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFK 458
+ MI+ G+ +A + M+ ++PD V++ S+L AC G V+ G SF
Sbjct: 509 --YGCMIDLLGHSGLFKEAEEMINNME----MEPDGVIWCSLLKACKIRGNVELGESF-- 560
Query: 459 SMQSNFGIEPSIEH-YLCLVDLLGRAGRFDLALK 491
Q+ IEP Y+ L ++ AGR++ K
Sbjct: 561 -AQNLIKIEPENPGCYVLLSNIYATAGRWNEVAK 593
>gi|242062998|ref|XP_002452788.1| hypothetical protein SORBIDRAFT_04g032540 [Sorghum bicolor]
gi|241932619|gb|EES05764.1| hypothetical protein SORBIDRAFT_04g032540 [Sorghum bicolor]
Length = 662
Score = 362 bits (930), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 202/590 (34%), Positives = 326/590 (55%), Gaps = 19/590 (3%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
++R+ T G + L+ YS M + TF KACA++ G+ VH L G
Sbjct: 83 LLRSYTGLGFNRQALALYSQMRAF----DHLTFTFAAKACADLRRRRHGRAVHGRALTAG 138
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F D +VQ L+ MY +C D VS+ V + R R+ VSWN++I+ + + A+ V
Sbjct: 139 FGGDGYVQNALVSMYMRCRDVVSAEAVFGAL--RSRTTVSWNTVITGCVKDGRAERALEV 196
Query: 121 LKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGL---LNNEIPLANSVMSMYAK 177
+ M G+ + +T VSV+ C+ + + M V++L + L N + N+++ MY K
Sbjct: 197 FETMVGRGVCIDRATVVSVLPACAQARDLHMGRAVHRLAVVRGLGNYAAVKNALIDMYGK 256
Query: 178 FGKVNEARSIFDEIG-ETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMS-VTPDLVVFL 235
+ +A+ +FDE + +VSWT +IG YV + ++AF L ++M S P+ V +
Sbjct: 257 CRSLEDAKRVFDEDSYDKDVVSWTAMIGAYVLNDHASKAFALGSEMLVTSEAQPNAVTMV 316
Query: 236 NLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEK 295
+L+ C + + A H+L ++ G ++ ++ LV Y KCG + + D V+EK
Sbjct: 317 HLLSACTSLLSGKHAKCTHALCIRLGLGSDTVVETALVDCYAKCGYMGM----IDMVVEK 372
Query: 296 S---VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGK 352
W + I GY +A+ LFK++L SVRP+ AT+A+ + A AE L + K
Sbjct: 373 GSRRTETWNAAISGYTHREQGKKALALFKQMLAESVRPDSATMASVIPAYAESADLVQAK 432
Query: 353 EIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHG 412
I +++ G + + T LI++++K G + A E+F+ +P+KD+ W+ +I GY +HG
Sbjct: 433 NIHCCLLIRGCLGSTDIATGLINVYAKAGDLGVAWELFQCLPEKDVVAWTTVIAGYGMHG 492
Query: 413 MGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEH 472
A+ L+ +M + G+ P+ V S++ +CSH+GMVD+GL F M+ G+ P+ EH
Sbjct: 493 HAQTAILLYSRMIEM-GVTPNTVTMASLMYSCSHAGMVDEGLRLFNDMRGVHGLMPNAEH 551
Query: 473 YLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLN 532
YLCLVD+LGRAGR + A + I +MP E VW+ LL AC+ H NVE GE AAK+L L
Sbjct: 552 YLCLVDMLGRAGRIEEAYRLIQDMPFEPSTSVWSALLGACVLHENVEFGEVAAKHLFELE 611
Query: 533 PGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSV 582
P + GNY+L+ ++ +A W + +M+ R L K+PG S V+ V
Sbjct: 612 PDNVGNYVLLGKVYAAADRWSDVQDLWRVMEGRGLHKDPGSSVVDAKSEV 661
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/270 (22%), Positives = 116/270 (42%), Gaps = 21/270 (7%)
Query: 250 ALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDA-------VLEKSVFLWTS 302
A +H+LLLKSG+ +LL+ Y CG R FDA V + +
Sbjct: 29 AAQLHALLLKSGHLLHCDSIHLLLGSYCACG------RPFDAHNLLVQMPQPPPVSVSNT 82
Query: 303 MIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNG 362
++ Y LG+ +A+ L+ ++ + T ACA+L G+ + + G
Sbjct: 83 LLRSYTGLGFNRQALALYSQMRAF----DHLTFTFAAKACADLRRRRHGRAVHGRALTAG 138
Query: 363 LESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFY 422
+ VQ +L+ M+ +C + A+ VF + + W+ +I G G ++AL +F
Sbjct: 139 FGGDGYVQNALVSMYMRCRDVVSAEAVFGALRSRTTVSWNTVITGCVKDGRAERALEVFE 198
Query: 423 KMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFK-SMQSNFGIEPSIEHYLCLVDLLG 481
M G+ D S+L AC+ + + G + + ++ G ++++ L+D+ G
Sbjct: 199 TMVG-RGVCIDRATVVSVLPACAQARDLHMGRAVHRLAVVRGLGNYAAVKN--ALIDMYG 255
Query: 482 RAGRFDLALKTIHEMPVEVQAQVWAPLLSA 511
+ + A + E + W ++ A
Sbjct: 256 KCRSLEDAKRVFDEDSYDKDVVSWTAMIGA 285
>gi|414867142|tpg|DAA45699.1| TPA: hypothetical protein ZEAMMB73_401104 [Zea mays]
Length = 746
Score = 362 bits (930), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 204/602 (33%), Positives = 332/602 (55%), Gaps = 16/602 (2%)
Query: 29 NSFTFPLVLKACANINSIWDGKRVHSHVLKVGF-QQDAFVQTGLIDMYSKCSDFVSSRKV 87
+SFTFP +++A S ++H+ L++G + F L+ Y + + +V
Sbjct: 68 DSFTFPPLVRAAPGPAS---AAQLHACALRLGLLHPNVFASGSLVHAYLRFGRVAEAYRV 124
Query: 88 LDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGC---- 143
DEMP R V +WN+++S R +A+ +L M G+ A T SV+ C
Sbjct: 125 FDEMPER--DVPAWNAMLSGLCRNTRAADAVTLLGRMVGEGVAGDAVTLSSVLPMCVVLG 182
Query: 144 SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTII 203
+ MH K GL + E+ + N+++ +Y K G + EA +F + +V+W +II
Sbjct: 183 DRALALVMHVYAVKHGL-SGELFVCNALIDVYGKLGMLTEAHWVFGGMALRDLVTWNSII 241
Query: 204 GGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYN 263
G V A L + M V PD++ ++L AQ G+ A S+H + + G++
Sbjct: 242 SANEQGGKVAAAVELFHGMMESGVCPDVLTLVSLASAVAQCGDELGAKSVHCYVRRRGWD 301
Query: 264 NEDPL-DNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKR 322
D + N +V MY K ++ A++VFD + ++ V W ++I GY Q G +EA+ ++
Sbjct: 302 VGDIIAGNAMVDMYAKMSKIDAAQKVFDNLPDRDVVSWNTLITGYMQNGLANEAIRIYND 361
Query: 323 LLK-TSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCG 381
+ ++P + T + L A + LG L +G + + GL + V T LI +++KCG
Sbjct: 362 MHNHEGLKPIQGTFVSVLPAYSYLGGLQQGMRMHALSIKTGLNLDVYVTTCLIDLYAKCG 421
Query: 382 RINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSIL 441
++ +A +FE +P + W+A+I G +HG G +AL+LF +MQ E +KPD V + S+L
Sbjct: 422 KLVEAMFLFEHMPRRSTGPWNAIIAGLGVHGHGAKALSLFSQMQQEE-IKPDHVTFVSLL 480
Query: 442 SACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQ 501
+ACSH+G+VD G SFF MQ+ +GI P +HY C+VD+LGRAG+ D A + I MP++
Sbjct: 481 AACSHAGLVDQGRSFFDLMQTVYGIVPIAKHYTCMVDMLGRAGQLDEAFEFIQSMPIKPD 540
Query: 502 AQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGL 561
+ VW LL AC H NVE+G+ A++NL L+P + G Y+LM+N++ G W R L
Sbjct: 541 SAVWGALLGACRIHGNVEMGKVASQNLFELDPENVGYYVLMSNMYAKIGKWDGVDAVRSL 600
Query: 562 MDDRRLTKEPGWSQVEIDGSVQVFVAGDRS--HHLSVDIRKTLKELHIKLLEAGYIAEAD 619
+ + L K PGWS +E+ GSV VF +G ++ H +I++ L +L K+ AGY+ +
Sbjct: 601 VRRQNLQKTPGWSSMEVKGSVSVFYSGTQTEPHPQHEEIQRGLHDLLAKMKSAGYVPDYS 660
Query: 620 IV 621
V
Sbjct: 661 FV 662
Score = 168 bits (426), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 113/400 (28%), Positives = 200/400 (50%), Gaps = 5/400 (1%)
Query: 102 NSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVS---VVSGCSFRQGISMHCCVYKL 158
NS+I+A SRA L A+ +L+ + L +F V + +H C +L
Sbjct: 36 NSLIAAFSRAALPRLALPLLRRLLAGAHPLRPDSFTFPPLVRAAPGPASAAQLHACALRL 95
Query: 159 GLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGL 218
GLL+ + + S++ Y +FG+V EA +FDE+ E + +W ++ G +A L
Sbjct: 96 GLLHPNVFASGSLVHAYLRFGRVAEAYRVFDEMPERDVPAWNAMLSGLCRNTRAADAVTL 155
Query: 219 CNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTK 278
+M V D V +++ C +G+ LAL MH +K G + E + N L+ +Y K
Sbjct: 156 LGRMVGEGVAGDAVTLSSVLPMCVVLGDRALALVMHVYAVKHGLSGELFVCNALIDVYGK 215
Query: 279 CGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATT 338
G L A VF + + + W S+I Q G + AV LF ++++ V P+ TL +
Sbjct: 216 LGMLTEAHWVFGGMALRDLVTWNSIISANEQGGKVAAAVELFHGMMESGVCPDVLTLVSL 275
Query: 339 LSACAELGSLSKGKEIEEYIVLNGLESNRQVQ-TSLIHMFSKCGRINKAKEVFERVPDKD 397
SA A+ G K + Y+ G + + +++ M++K +I+ A++VF+ +PD+D
Sbjct: 276 ASAVAQCGDELGAKSVHCYVRRRGWDVGDIIAGNAMVDMYAKMSKIDAAQKVFDNLPDRD 335
Query: 398 LAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFF 457
+ W+ +I GY +G+ ++A+ ++ M + EGLKP + S+L A S+ G + G+
Sbjct: 336 VVSWNTLITGYMQNGLANEAIRIYNDMHNHEGLKPIQGTFVSVLPAYSYLGGLQQGMR-M 394
Query: 458 KSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMP 497
++ G+ + CL+DL + G+ A+ MP
Sbjct: 395 HALSIKTGLNLDVYVTTCLIDLYAKCGKLVEAMFLFEHMP 434
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 106/413 (25%), Positives = 189/413 (45%), Gaps = 46/413 (11%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+I + G + + M+++GV + T + A A K VH +V + G
Sbjct: 240 IISANEQGGKVAAAVELFHGMMESGVCPDVLTLVSLASAVAQCGDELGAKSVHCYVRRRG 299
Query: 61 FQ-QDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAIL 119
+ D ++DMY+K S +++KV D +P R VVSWN++I+ + + L +EAI
Sbjct: 300 WDVGDIIAGNAMVDMYAKMSKIDAAQKVFDNLPD--RDVVSWNTLITGYMQNGLANEAIR 357
Query: 120 VLKEMWVL-GLELSASTFVSVVSGCSF----RQGISMHCCVYKLGLLNNEIPLANSVMSM 174
+ +M GL+ TFVSV+ S+ +QG+ MH K G LN ++ + ++ +
Sbjct: 358 IYNDMHNHEGLKPIQGTFVSVLPAYSYLGGLQQGMRMHALSIKTG-LNLDVYVTTCLIDL 416
Query: 175 YAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVF 234
YAK GK+ EA +F+ + S W II G G+ +A L +QM++ + PD V F
Sbjct: 417 YAKCGKLVEAMFLFEHMPRRSTGPWNAIIAGLGVHGHGAKALSLFSQMQQEEIKPDHVTF 476
Query: 235 LNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLE 294
++L+ C+ G L+ G + D L+ ++Y G + +A+
Sbjct: 477 VSLLAACSHAG-----------LVDQGRSFFD----LMQTVY---GIVPIAKH------- 511
Query: 295 KSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEI 354
+T M+ + G EA F+ + ++P+ A L AC G++ GK
Sbjct: 512 -----YTCMVDMLGRAGQLDEA---FEFIQSMPIKPDSAVWGALLGACRIHGNVEMGKVA 563
Query: 355 EEYIVLNGLESNRQVQTSLIHMFSKCGR---INKAKEVFERVPDKDLAVWSAM 404
+ + E N + +M++K G+ ++ + + R + WS+M
Sbjct: 564 SQNLFELDPE-NVGYYVLMSNMYAKIGKWDGVDAVRSLVRRQNLQKTPGWSSM 615
>gi|356510389|ref|XP_003523921.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Glycine max]
Length = 818
Score = 362 bits (929), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 202/625 (32%), Positives = 346/625 (55%), Gaps = 9/625 (1%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
M++ N S + L + M+ V + +L+ C + G+ +H ++ G
Sbjct: 116 MLKGYAKNSSLGDALCFFLRMMCDEVRLVVGDYACLLQLCGENLDLKKGREIHGLIITNG 175
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F+ + FV T ++ +Y+KC ++ K+ + M + + +VSW ++++ +++ A+ +
Sbjct: 176 FESNLFVMTAVMSLYAKCRQIDNAYKMFERM--QHKDLVSWTTLVAGYAQNGHAKRALQL 233
Query: 121 LKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
+ +M G + + T VS++ + R G S+H ++ G + + + N+++ MY
Sbjct: 234 VLQMQEAGQKPDSVTLVSILPAVADMKALRIGRSIHGYAFRSGF-ESLVNVTNALLDMYF 292
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K G AR +F + ++VSW T+I G G EAF +M P V +
Sbjct: 293 KCGSARIARLVFKGMRSKTVVSWNTMIDGCAQNGESEEAFATFLKMLDEGEVPTRVTMMG 352
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
++L CA +G+L +H LL K ++ + N L+SMY+KC +++A +F+ LEK+
Sbjct: 353 VLLACANLGDLERGWFVHKLLDKLKLDSNVSVMNSLISMYSKCKRVDIAASIFNN-LEKT 411
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEE 356
W +MI GYAQ G EA+NLF + ++ + TL ++A A+ + K I
Sbjct: 412 NVTWNAMILGYAQNGCVKEALNLFCMMQSQGIKLDCFTLVGVITALADFSVNRQAKWIHG 471
Query: 357 YIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQ 416
V +++N V T+L+ M++KCG I A+++F+ + ++ + W+AMI+GY HG+G +
Sbjct: 472 LAVRACMDNNVFVSTALVDMYAKCGAIKTARKLFDMMQERHVITWNAMIDGYGTHGVGKE 531
Query: 417 ALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCL 476
L+LF +MQ +KP+ + + S++SACSHSG V++GL FKSMQ ++ +EP+++HY +
Sbjct: 532 TLDLFNEMQK-GAVKPNDITFLSVISACSHSGFVEEGLLLFKSMQEDYYLEPTMDHYSAM 590
Query: 477 VDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGST 536
VDLLGRAG+ D A I EMP++ V +L AC H NVELGE AA+ L L+P
Sbjct: 591 VDLLGRAGQLDDAWNFIQEMPIKPGISVLGAMLGACKIHKNVELGEKAAQKLFKLDPDEG 650
Query: 537 GNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSV 596
G ++L+AN++ S MW + A R M+D+ L K PG S VE+ + F +G +H S
Sbjct: 651 GYHVLLANIYASNSMWDKVAKVRTAMEDKGLHKTPGCSWVELRNEIHTFYSGSTNHPESK 710
Query: 597 DIRKTLKELHIKLLEAGYIAEADIV 621
I L+ L ++ AGY+ + D +
Sbjct: 711 KIYAFLETLGDEIKAAGYVPDPDSI 735
Score = 138 bits (348), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 90/329 (27%), Positives = 167/329 (50%), Gaps = 6/329 (1%)
Query: 163 NEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQM 222
NE V+S++ KFG +EA +F+ + V + ++ GY ++ +A LC +
Sbjct: 77 NEHLFQTKVISLFCKFGSNSEAARVFEHVELKLDVLYHIMLKGYAKNSSLGDA--LCFFL 134
Query: 223 RRMSVTPDLVV--FLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCG 280
R M LVV + L+ C + +L +H L++ +G+ + + ++S+Y KC
Sbjct: 135 RMMCDEVRLVVGDYACLLQLCGENLDLKKGREIHGLIITNGFESNLFVMTAVMSLYAKCR 194
Query: 281 DLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLS 340
++ A ++F+ + K + WT+++ GYAQ G+ A+ L ++ + +P+ TL + L
Sbjct: 195 QIDNAYKMFERMQHKDLVSWTTLVAGYAQNGHAKRALQLVLQMQEAGQKPDSVTLVSILP 254
Query: 341 ACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAV 400
A A++ +L G+ I Y +G ES V +L+ M+ KCG A+ VF+ + K +
Sbjct: 255 AVADMKALRIGRSIHGYAFRSGFESLVNVTNALLDMYFKCGSARIARLVFKGMRSKTVVS 314
Query: 401 WSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSM 460
W+ MI+G A +G ++A F KM EG P V +L AC++ G ++ G F +
Sbjct: 315 WNTMIDGCAQNGESEEAFATFLKMLD-EGEVPTRVTMMGVLLACANLGDLERGW-FVHKL 372
Query: 461 QSNFGIEPSIEHYLCLVDLLGRAGRFDLA 489
++ ++ L+ + + R D+A
Sbjct: 373 LDKLKLDSNVSVMNSLISMYSKCKRVDIA 401
Score = 122 bits (305), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 90/291 (30%), Positives = 140/291 (48%), Gaps = 13/291 (4%)
Query: 256 LLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSE 315
++K+G+ NE ++S++ K G A RVF+ V K L+ M+ GYA+ +
Sbjct: 69 FIIKNGFYNEHLFQTKVISLFCKFGSNSEAARVFEHVELKLDVLYHIMLKGYAKNSSLGD 128
Query: 316 AVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIH 375
A+ F R++ VR A L C E L KG+EI I+ NG ESN V T+++
Sbjct: 129 ALCFFLRMMCDEVRLVVGDYACLLQLCGENLDLKKGREIHGLIITNGFESNLFVMTAVMS 188
Query: 376 MFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAV 435
+++KC +I+ A ++FER+ KDL W+ ++ GYA +G +AL L +MQ G KPD+V
Sbjct: 189 LYAKCRQIDNAYKMFERMQHKDLVSWTTLVAGYAQNGHAKRALQLVLQMQEA-GQKPDSV 247
Query: 436 VYTSILSACSHSGMVDDGLSF----FKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALK 491
SIL A + + G S F+S G E + L+D+ + G +A
Sbjct: 248 TLVSILPAVADMKALRIGRSIHGYAFRS-----GFESLVNVTNALLDMYFKCGSARIARL 302
Query: 492 TIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILM 542
M + W ++ C + N E E A L L+ G + M
Sbjct: 303 VFKGMRSKTVVS-WNTMIDGCAQ--NGESEEAFATFLKMLDEGEVPTRVTM 350
>gi|147769567|emb|CAN65709.1| hypothetical protein VITISV_020733 [Vitis vinifera]
Length = 609
Score = 362 bits (929), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 197/576 (34%), Positives = 318/576 (55%), Gaps = 8/576 (1%)
Query: 2 IRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGF 61
I S N G + L + M Q G+ N+ TFP V KAC+ + ++ + VH+HV+K F
Sbjct: 26 ITESVNQGYAHKALLLFRQMKQNGLEPNNLTFPSVAKACSKLLNLKYSQIVHTHVVKSRF 85
Query: 62 QQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVL 121
Q D FVQT ++DMY KCS + + MP R V SWNS+I ++ D + +
Sbjct: 86 QADLFVQTSVVDMYVKCSQLGFAYNLFSRMPXR--DVASWNSMIXGFAQLGFVDRVVSLF 143
Query: 122 KEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGL---LNNEIPLANSVMSMYAKF 178
EM + G+ + T + + + + M ++ G+ ++ ++ ++N+ ++ YAK
Sbjct: 144 CEMGIEGIRADSVTVIGLTHSALSLKDLKMLESIHSFGIKIGIDTDVSVSNTWIAAYAKC 203
Query: 179 GKVNEARSIFDEI--GETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
G+ A ++FD I G + VSW ++I GY + ++A G +M DL L+
Sbjct: 204 GEFGLAETVFDGIDKGLKTXVSWNSMIAGYAHFEQCSKAVGFFKKMLXGGFRADLSTILS 263
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
L+ C Q LF +H+ ++ G +++ + N L+SMY+KCGD+ AR +FD +L K+
Sbjct: 264 LLSSCVQPEVLFHGKLIHAHGIQVGCDSDIQVINTLISMYSKCGDIGSARYLFDNMLGKT 323
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEE 356
WT+MI G A+ G EA+ LF + +P+ T+ + +S C + G+L GK I+
Sbjct: 324 RVSWTAMIAGXAEKGDLDEAMTLFSAMEAVGEKPDLVTIISLMSGCGQTGALELGKWIDT 383
Query: 357 YIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQ 416
Y NGL+ N V +LI +++KCG ++ A+E+F +P+K L W+ +I G A++G +
Sbjct: 384 YATANGLKDNLMVCNALIDVYAKCGSMDNARELFYTMPEKSLVSWTTLIAGCALNGEFKE 443
Query: 417 ALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCL 476
AL LF++M + GLKP+ + + ++L AC+H+G ++ G F M + I P ++HY C+
Sbjct: 444 ALGLFFQMVEL-GLKPNHITFLAVLQACNHAGFLEKGWECFNLMTKVYKINPGLDHYSCM 502
Query: 477 VDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGST 536
DLLGR GR A + I MP + +W+ LLSAC H NV +GE A +L L P +
Sbjct: 503 ADLLGRKGRLKEAFEFIQNMPFKPDVGIWSVLLSACKIHQNVVIGECVAYHLFELEPQTA 562
Query: 537 GNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPG 572
Y+ MAN++ SAG W A R +M + K G
Sbjct: 563 VPYVQMANIYASAGKWDRVAAIRTMMKCNKAMKSSG 598
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 127/426 (29%), Positives = 212/426 (49%), Gaps = 14/426 (3%)
Query: 95 LRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCS------FRQG 148
L +V WNS I+ +A+L+ ++M GLE + TF SV CS + Q
Sbjct: 16 LWTVAQWNSSITESVNQGYAHKALLLFRQMKQNGLEPNNLTFPSVAKACSKLLNLKYSQI 75
Query: 149 ISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVN 208
+ H + ++ + SV+ MY K ++ A ++F + + SW ++I G+
Sbjct: 76 VHTHVVKSR---FQADLFVQTSVVDMYVKCSQLGFAYNLFSRMPXRDVASWNSMIXGFAQ 132
Query: 209 VGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPL 268
+G V+ L +M + D V + L + +L + S+HS +K G + + +
Sbjct: 133 LGFVDRVVSLFCEMGIEGIRADSVTVIGLTHSALSLKDLKMLESIHSFGIKIGIDTDVSV 192
Query: 269 DNLLVSMYTKCGDLELARRVFDAVLE--KSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKT 326
N ++ Y KCG+ LA VFD + + K+ W SMI GYA S+AV FK++L
Sbjct: 193 SNTWIAAYAKCGEFGLAETVFDGIDKGLKTXVSWNSMIAGYAHFEQCSKAVGFFKKMLXG 252
Query: 327 SVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKA 386
R + +T+ + LS+C + L GK I + + G +S+ QV +LI M+SKCG I A
Sbjct: 253 GFRADLSTILSLLSSCVQPEVLFHGKLIHAHGIQVGCDSDIQVINTLISMYSKCGDIGSA 312
Query: 387 KEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSH 446
+ +F+ + K W+AMI G A G D+A+ LF M+ V G KPD V S++S C
Sbjct: 313 RYLFDNMLGKTRVSWTAMIAGXAEKGDLDEAMTLFSAMEAV-GEKPDLVTIISLMSGCGQ 371
Query: 447 SGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWA 506
+G ++ G + + + G++ ++ L+D+ + G D A + + MP E W
Sbjct: 372 TGALELG-KWIDTYATANGLKDNLMVCNALIDVYAKCGSMDNARELFYTMP-EKSLVSWT 429
Query: 507 PLLSAC 512
L++ C
Sbjct: 430 TLIAGC 435
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 121/421 (28%), Positives = 212/421 (50%), Gaps = 15/421 (3%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI G + +S + M G+ +S T + + ++ + + +HS +K+G
Sbjct: 126 MIXGFAQLGFVDRVVSLFCEMGIEGIRADSVTVIGLTHSALSLKDLKMLESIHSFGIKIG 185
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
D V I Y+KC +F + V D + L++ VSWNS+I+ ++ +A+
Sbjct: 186 IDTDVSVSNTWIAAYAKCGEFGLAETVFDGIDKGLKTXVSWNSMIAGYAHFEQCSKAVGF 245
Query: 121 LKEMWVLGLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
K+M G ST +S++S C G +H ++G +++I + N+++SMY+
Sbjct: 246 FKKMLXGGFRADLSTILSLLSSCVQPEVLFHGKLIHAHGIQVG-CDSDIQVINTLISMYS 304
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K G + AR +FD + + VSWT +I G G+++EA L + M + PDLV ++
Sbjct: 305 KCGDIGSARYLFDNMLGKTRVSWTAMIAGXAEKGDLDEAMTLFSAMEAVGEKPDLVTIIS 364
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
L+ GC Q G L L + + +G + + N L+ +Y KCG ++ AR +F + EKS
Sbjct: 365 LMSGCGQTGALELGKWIDTYATANGLKDNLMVCNALIDVYAKCGSMDNARELFYTMPEKS 424
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKE--- 353
+ WT++I G A G EA+ LF ++++ ++PN T L AC G L KG E
Sbjct: 425 LVSWTTLIAGCALNGEFKEALGLFFQMVELGLKPNHITFLAVLQACNHAGFLEKGWECFN 484
Query: 354 --IEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDK-DLAVWSAMINGYAI 410
+ Y + GL+ + + + + GR+ +A E + +P K D+ +WS +++ I
Sbjct: 485 LMTKVYKINPGLDH----YSCMADLLGRKGRLKEAFEFIQNMPFKPDVGIWSVLLSACKI 540
Query: 411 H 411
H
Sbjct: 541 H 541
>gi|449440387|ref|XP_004137966.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
mitochondrial-like [Cucumis sativus]
Length = 792
Score = 362 bits (928), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 202/619 (32%), Positives = 344/619 (55%), Gaps = 10/619 (1%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI + G + ++ Y ML++G + FTF ++K+C+ ++ +++H+HVLK
Sbjct: 170 MISGYSRYGEEDNAITLYVQMLRSGHIPDHFTFGSIVKSCSGLDDFKLARQLHAHVLKSE 229
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F D Q LI MY+K S + V + ++ ++SW S+I+ S+ EA+
Sbjct: 230 FGADLIAQNALISMYTKFSQMADAINVFSR--IIIKDLISWGSMIAGFSQLGYELEALCH 287
Query: 121 LKEMWVLGL-ELSASTFVSVVSGCSF----RQGISMHCCVYKLGLLNNEIPLANSVMSMY 175
+EM + + + F S S CS G +H K GL +++ S+ MY
Sbjct: 288 FREMLSQSVYQPNEFVFGSAFSACSKLLEPDCGRQIHGLCIKFGL-GSDLFAGCSLCDMY 346
Query: 176 AKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFL 235
AK G + AR++F I + +V+W II G+ +V N E+ +QMR + P+ V L
Sbjct: 347 AKCGFLESARTVFYHIEKPDLVAWNAIIAGFASVSNAKESSSFFSQMRHTGLVPNDVTVL 406
Query: 236 NLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEK 295
+L+ C++ L + +HS ++K G+N + P+ N L+SMY+KC +L A +VF+ + K
Sbjct: 407 SLLCACSEPVMLNHGIQVHSYIVKMGFNLDIPVCNSLLSMYSKCSNLNDALQVFEDIGNK 466
Query: 296 S-VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEI 354
+ + W +++ Q E + L K + + ++P+ TL L + ++ S G +I
Sbjct: 467 ADIVSWNTLLTACLQQNQAGEVLRLTKLMFASRIKPDHVTLTNVLVSSGQIASYEVGSQI 526
Query: 355 EEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMG 414
+I+ +GL + V +LI+M++KCG + A+++F+ + + D+ WS++I GYA G G
Sbjct: 527 HCFIMKSGLNLDISVSNALINMYTKCGSLECARKMFDSIGNPDIISWSSLIVGYAQAGCG 586
Query: 415 DQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYL 474
+A LF M+ + G+KP+ + + IL+ACSH GMV++GL +++MQ ++ I P+ EH
Sbjct: 587 KEAFELFRTMRGL-GVKPNEITFVGILTACSHIGMVEEGLKLYRTMQEDYRISPTKEHCS 645
Query: 475 CLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPG 534
C+VDLL RAG D+A I +MP VW LL+AC H N+E+G+ AA+N+L ++P
Sbjct: 646 CMVDLLARAGCLDVAEDFIKQMPFVPDVVVWKTLLAACKVHGNLEVGKRAAENVLKIDPS 705
Query: 535 STGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHL 594
++ +++ N+ S+G WK+ A R M + K PG S +EI V VF+A D H
Sbjct: 706 NSAAVVMLCNIHASSGHWKDFARLRSSMRRMDVGKVPGQSWIEIKDKVHVFLAEDNLHPE 765
Query: 595 SVDIRKTLKELHIKLLEAG 613
I L+EL +++L+ G
Sbjct: 766 RGKIYTMLEELMLQILDDG 784
Score = 206 bits (525), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 128/418 (30%), Positives = 215/418 (51%), Gaps = 10/418 (2%)
Query: 30 SFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLD 89
S T+ ++ AC+++ S+ G+++H H+L +Q D +Q ++ MY KC +R + D
Sbjct: 98 SVTYTHLINACSSLRSLEHGRKIHRHMLTCNYQPDMILQNHILSMYGKCGSLKEARNMFD 157
Query: 90 EMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCS----F 145
MP L++VVSW S+IS +SR D AI + +M G TF S+V CS F
Sbjct: 158 SMP--LKNVVSWTSMISGYSRYGEEDNAITLYVQMLRSGHIPDHFTFGSIVKSCSGLDDF 215
Query: 146 RQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGG 205
+ +H V K ++ N+++SMY KF ++ +A ++F I ++SW ++I G
Sbjct: 216 KLARQLHAHVLK-SEFGADLIAQNALISMYTKFSQMADAINVFSRIIIKDLISWGSMIAG 274
Query: 206 YVNVGNVNEAFGLCNQMRRMSV-TPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNN 264
+ +G EA +M SV P+ VF + C+++ +H L +K G +
Sbjct: 275 FSQLGYELEALCHFREMLSQSVYQPNEFVFGSAFSACSKLLEPDCGRQIHGLCIKFGLGS 334
Query: 265 EDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLL 324
+ L MY KCG LE AR VF + + + W ++I G+A + E+ + F ++
Sbjct: 335 DLFAGCSLCDMYAKCGFLESARTVFYHIEKPDLVAWNAIIAGFASVSNAKESSSFFSQMR 394
Query: 325 KTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRIN 384
T + PN+ T+ + L AC+E L+ G ++ YIV G + V SL+ M+SKC +N
Sbjct: 395 HTGLVPNDVTVLSLLCACSEPVMLNHGIQVHSYIVKMGFNLDIPVCNSLLSMYSKCSNLN 454
Query: 385 KAKEVFERVPDK-DLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSIL 441
A +VFE + +K D+ W+ ++ + L L K+ +KPD V T++L
Sbjct: 455 DALQVFEDIGNKADIVSWNTLLTACLQQNQAGEVLRL-TKLMFASRIKPDHVTLTNVL 511
Score = 198 bits (504), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 129/429 (30%), Positives = 218/429 (50%), Gaps = 18/429 (4%)
Query: 131 LSASTFVSVVSGCSFRQGISMHCCVYKLGLLNNEIP---LANSVMSMYAKFGKVNEARSI 187
L + T+ +++ CS + + +++ L N P L N ++SMY K G + EAR++
Sbjct: 96 LKSVTYTHLINACSSLRSLEHGRKIHRHMLTCNYQPDMILQNHILSMYGKCGSLKEARNM 155
Query: 188 FDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNL 247
FD + ++VSWT++I GY G + A L QM R PD F +++ C+ + +
Sbjct: 156 FDSMPLKNVVSWTSMISGYSRYGEEDNAITLYVQMLRSGHIPDHFTFGSIVKSCSGLDDF 215
Query: 248 FLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGY 307
LA +H+ +LKS + + N L+SMYTK + A VF ++ K + W SMI G+
Sbjct: 216 KLARQLHAHVLKSEFGADLIAQNALISMYTKFSQMADAINVFSRIIIKDLISWGSMIAGF 275
Query: 308 AQLGYPSEAVNLFKRLLKTSV-RPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESN 366
+QLGY EA+ F+ +L SV +PNE + SAC++L G++I + GL S+
Sbjct: 276 SQLGYELEALCHFREMLSQSVYQPNEFVFGSAFSACSKLLEPDCGRQIHGLCIKFGLGSD 335
Query: 367 RQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQH 426
SL M++KCG + A+ VF + DL W+A+I G+A ++ + F +M+H
Sbjct: 336 LFAGCSLCDMYAKCGFLESARTVFYHIEKPDLVAWNAIIAGFASVSNAKESSSFFSQMRH 395
Query: 427 VEGLKPDAVVYTSILSACSHSGMVDDGL---SFFKSMQSNFGIEPSIEHYLC--LVDLLG 481
GL P+ V S+L ACS M++ G+ S+ M N I +C L+ +
Sbjct: 396 T-GLVPNDVTVLSLLCACSEPVMLNHGIQVHSYIVKMGFNLDIP------VCNSLLSMYS 448
Query: 482 RAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYIL 541
+ + AL+ ++ + W LL+AC++ + + GE L +++
Sbjct: 449 KCSNLNDALQVFEDIGNKADIVSWNTLLTACLQQN--QAGEVLRLTKLMFASRIKPDHVT 506
Query: 542 MANLFTSAG 550
+ N+ S+G
Sbjct: 507 LTNVLVSSG 515
>gi|297844454|ref|XP_002890108.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297335950|gb|EFH66367.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 866
Score = 362 bits (928), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 213/613 (34%), Positives = 329/613 (53%), Gaps = 12/613 (1%)
Query: 6 TNNGSFEETLSTYSSMLQTG-VHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQD 64
G F+E + Y ML G V + +TFP VL+ C I + G+ VH HV++ G++ D
Sbjct: 171 AKQGYFDEAICLYHRMLWVGGVKPDVYTFPCVLRTCGGIPDLARGREVHVHVVRYGYELD 230
Query: 65 AFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEM 124
V LI MY KC D S+R + D MP R ++SWN++IS + + E + + M
Sbjct: 231 IDVVNALITMYVKCGDVKSARLLFDRMP--RRDIISWNAMISGYFENGMGHEGLKLFFAM 288
Query: 125 WVLGLELSASTFVSVVSGCSF----RQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGK 180
L ++ T SV+S C R G +H V G +I + NS+ MY G
Sbjct: 289 RGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAV-DISVCNSLTQMYLYAGS 347
Query: 181 VNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILG 240
EA +F + IVSWTT+I GY +A M + SV PD + ++
Sbjct: 348 WREAEKLFSRMDCKDIVSWTTMISGYEYNFLPEKAIDTYRMMDQDSVKPDEITVAAVLSA 407
Query: 241 CAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLW 300
CA +G+L + +H L +K+ + + N L++MY+KC ++ A +F + K+V W
Sbjct: 408 CATLGDLDTGVELHKLAIKARLISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISW 467
Query: 301 TSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVL 360
TS+I G EA+ +F R +K +++PN TL L+ACA +G+L GKEI +++
Sbjct: 468 TSIIAGLRLNNRCFEAL-IFFRQMKMTLQPNAITLTAALAACARIGALMCGKEIHAHVLR 526
Query: 361 NGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNL 420
G+ + + +L+ M+ +CGR+N A F KD++ W+ ++ GY+ G G + L
Sbjct: 527 TGVGLDDFLPNALLDMYVRCGRMNIAWNQFNS-QKKDVSSWNILLTGYSERGQGSVVVEL 585
Query: 421 FYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLL 480
F +M ++PD + + S+L C S MV GL +F M+ +G+ P+++HY C+VDLL
Sbjct: 586 FDRMVKAR-VRPDEITFISLLCGCGKSQMVRQGLMYFSKMEE-YGVTPNLKHYACVVDLL 643
Query: 481 GRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYI 540
GRAG A K I +MPV VW LL+AC HHN++LGE +A+ + L+ GS G YI
Sbjct: 644 GRAGELQEAHKFIQKMPVTPDPAVWGALLNACRIHHNIDLGELSAQRIFELDKGSVGYYI 703
Query: 541 LMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRK 600
L+ NL+ G W+E A R +M + LT + G S VE+ G V F++ D+ H + +I
Sbjct: 704 LLCNLYADCGKWREVAKVRRMMKENGLTVDAGCSWVEVKGKVHAFLSDDKYHPQTKEINT 763
Query: 601 TLKELHIKLLEAG 613
L + K+ E G
Sbjct: 764 VLDGFYEKMSEVG 776
Score = 202 bits (514), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 144/510 (28%), Positives = 258/510 (50%), Gaps = 15/510 (2%)
Query: 8 NGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFV 67
NG EE + +SM + V + F +++ C + +G +V+S L +
Sbjct: 72 NGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAHEEGSKVYSVALSSMNSLSVEL 131
Query: 68 QTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEM-WV 126
+ M+ + + V + V +M R ++ SWN ++ +++ DEAI + M WV
Sbjct: 132 GNAFLAMFVRFGNLVDAWYVFGKMSER--NLFSWNVLVGGYAKQGYFDEAICLYHRMLWV 189
Query: 127 LGLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVN 182
G++ TF V+ C +G +H V + G +I + N++++MY K G V
Sbjct: 190 GGVKPDVYTFPCVLRTCGGIPDLARGREVHVHVVRYGY-ELDIDVVNALITMYVKCGDVK 248
Query: 183 EARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCA 242
AR +FD + I+SW +I GY G +E L MR +SV PDL+ ++I C
Sbjct: 249 SARLLFDRMPRRDIISWNAMISGYFENGMGHEGLKLFFAMRGLSVDPDLMTLTSVISACE 308
Query: 243 QVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTS 302
+G+ L +H+ ++ +G+ + + N L MY G A ++F + K + WT+
Sbjct: 309 LLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLYAGSWREAEKLFSRMDCKDIVSWTT 368
Query: 303 MIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNG 362
MI GY P +A++ ++ + + SV+P+E T+A LSACA LG L G E+ + +
Sbjct: 369 MISGYEYNFLPEKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKAR 428
Query: 363 LESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFY 422
L S V +LI+M+SKC I+KA ++F +P K++ W+++I G ++ +AL F
Sbjct: 429 LISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFFR 488
Query: 423 KMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKS-MQSNFGIEPSIEHYLCLVDLLG 481
+M+ L+P+A+ T+ L+AC+ G + G +++ G++ + + L+D+
Sbjct: 489 QMKMT--LQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPN--ALLDMYV 544
Query: 482 RAGRFDLALKTIHEMPVEVQAQVWAPLLSA 511
R GR ++A + +V + W LL+
Sbjct: 545 RCGRMNIAWNQFNSQKKDVSS--WNILLTG 572
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 69/140 (49%), Gaps = 2/140 (1%)
Query: 306 GYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLES 365
G G EA+ L + + V +E + C + +G ++ + L+ + S
Sbjct: 68 GLCANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAHEEGSKVYS-VALSSMNS 126
Query: 366 -NRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKM 424
+ ++ + + MF + G + A VF ++ +++L W+ ++ GYA G D+A+ L+++M
Sbjct: 127 LSVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAICLYHRM 186
Query: 425 QHVEGLKPDAVVYTSILSAC 444
V G+KPD + +L C
Sbjct: 187 LWVGGVKPDVYTFPCVLRTC 206
>gi|297800922|ref|XP_002868345.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297314181|gb|EFH44604.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 1047
Score = 362 bits (928), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 195/623 (31%), Positives = 338/623 (54%), Gaps = 12/623 (1%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+I + G E+ + + M G+ +S T ++ AC++ +++ G+++H++ K+G
Sbjct: 343 LINGLSQCGYGEKAMELFKRMQLDGLEPDSNTLASLVVACSSDGTLFSGQQLHAYTTKLG 402
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLND--EAI 118
F + ++ L+++Y+KCSD ++ E V +VV WN ++ A+ L+D +
Sbjct: 403 FASNDKIEGALLNLYAKCSDIETALNYFLETEVE--NVVLWNVMLVAY--GLLDDLRNSF 458
Query: 119 LVLKEMWVLGLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSM 174
+ ++M + + + T+ S++ C G +H + K N + + ++ M
Sbjct: 459 RIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTSFQLNAY-VCSVLIDM 517
Query: 175 YAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVF 234
YAK GK++ A I +VSWTT+I GY ++A QM + D V
Sbjct: 518 YAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGL 577
Query: 235 LNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLE 294
N + CA + L +H+ SG++++ P N LV++Y+KCG++E A F+
Sbjct: 578 TNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSKCGNIEEAYLAFEQTEA 637
Query: 295 KSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEI 354
W +++ G+ Q G EA+ +F R+ + + N T + + A +E ++ +GK++
Sbjct: 638 GDNIAWNALVSGFQQSGNNEEALRVFARMNREGIDSNNFTFGSAVKAASETANMKQGKQV 697
Query: 355 EEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMG 414
I G +S +V ++I M++KCG I+ AK+ F + K+ W+AMIN Y+ HG G
Sbjct: 698 HAVITKTGYDSETEVCNAIISMYAKCGSISDAKKQFLELSMKNEVSWNAMINAYSKHGFG 757
Query: 415 DQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYL 474
+AL+ F +M H ++P+ V +LSACSH G+VD G+ +F+SM + +G+ P EHY+
Sbjct: 758 SEALDSFDQMIH-SNVRPNHVTLVGVLSACSHIGLVDKGIEYFESMNTEYGLAPKPEHYV 816
Query: 475 CLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPG 534
C+VD+L RAG A I EMP+E A VW LLSAC+ H N+E+GE+AA +LL L P
Sbjct: 817 CVVDMLTRAGLLSRAKDFILEMPIEPDALVWRTLLSACVVHKNMEIGEFAAHHLLELEPE 876
Query: 535 STGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHL 594
+ Y+L++NL+ W R M ++ + KEPG S +E+ S+ F GD++H L
Sbjct: 877 DSATYVLLSNLYAVCRKWDARDLTRQKMKEKGVKKEPGQSWIEVKNSIHSFYVGDQNHPL 936
Query: 595 SVDIRKTLKELHIKLLEAGYIAE 617
+ +I + K+L + E GY+ +
Sbjct: 937 ADEIHEYFKDLTKRASEIGYVQD 959
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 126/433 (29%), Positives = 220/433 (50%), Gaps = 9/433 (2%)
Query: 18 YSSMLQTGVHGNSFTFPLVLKACANINSIWDG-KRVHSHVLKVGFQQDAFVQTGLIDMYS 76
+ M+ V N TF VL+AC + +D +++H+ ++ G + V LID+YS
Sbjct: 157 FGRMVNENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARIIYQGLGKSTIVCNPLIDLYS 216
Query: 77 KCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTF 136
+ +R+V D + ++ S SW ++IS S+ EAI + +M+VLG+ + F
Sbjct: 217 RNGFVDRARRVFDGLYLKDHS--SWVAMISGLSKNECEVEAIRLFCDMYVLGIMPTPYAF 274
Query: 137 VSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIG 192
SV+S C S G +H V KLG +++ + N+++S+Y G + A IF +
Sbjct: 275 SSVLSACKKIESLEIGEQLHGLVLKLGF-SSDTYVCNALVSLYFHLGSLISAEHIFSNMS 333
Query: 193 ETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALS 252
+ V++ T+I G G +A L +M+ + PD +L++ C+ G LF
Sbjct: 334 QRDAVTYNTLINGLSQCGYGEKAMELFKRMQLDGLEPDSNTLASLVVACSSDGTLFSGQQ 393
Query: 253 MHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGY 312
+H+ K G+ + D ++ L+++Y KC D+E A F ++V LW M+ Y L
Sbjct: 394 LHAYTTKLGFASNDKIEGALLNLYAKCSDIETALNYFLETEVENVVLWNVMLVAYGLLDD 453
Query: 313 PSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTS 372
+ +F+++ + PN+ T + L C LG L G++I I+ + N V +
Sbjct: 454 LRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTSFQLNAYVCSV 513
Query: 373 LIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKP 432
LI M++K G+++ A ++ R KD+ W+ MI GY + D+AL F +M G++
Sbjct: 514 LIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLD-RGIRS 572
Query: 433 DAVVYTSILSACS 445
D V T+ +SAC+
Sbjct: 573 DEVGLTNAVSACA 585
Score = 194 bits (494), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 130/493 (26%), Positives = 245/493 (49%), Gaps = 19/493 (3%)
Query: 6 TNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANIN-SIWDGKRVHSHVLKVGFQQD 64
+ + SF+E + S+ G+ N T +L+ C N S+ +G+++HS +LK+GF +
Sbjct: 45 SEDESFQE--NGIDSVENCGIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGFDNN 102
Query: 65 AFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEM 124
A + L+D Y D + KV DEMP R++ +WN +I + L+ + + M
Sbjct: 103 ACLSEKLLDFYLFKGDLDGALKVFDEMPE--RTIFTWNKMIKELASRSLSGKVFCLFGRM 160
Query: 125 WVLGLELSASTFVSVVSGC-----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFG 179
+ + TF V+ C +F +H + GL + I + N ++ +Y++ G
Sbjct: 161 VNENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARIIYQGLGKSTI-VCNPLIDLYSRNG 219
Query: 180 KVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLIL 239
V+ AR +FD + SW +I G EA L M + + P F +++
Sbjct: 220 FVDRARRVFDGLYLKDHSSWVAMISGLSKNECEVEAIRLFCDMYVLGIMPTPYAFSSVLS 279
Query: 240 GCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFL 299
C ++ +L + +H L+LK G++++ + N LVS+Y G L A +F + ++
Sbjct: 280 ACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGSLISAEHIFSNMSQRDAVT 339
Query: 300 WTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIV 359
+ ++I G +Q GY +A+ LFKR+ + P+ TLA+ + AC+ G+L G+++ Y
Sbjct: 340 YNTLINGLSQCGYGEKAMELFKRMQLDGLEPDSNTLASLVVACSSDGTLFSGQQLHAYTT 399
Query: 360 LNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALN 419
G SN +++ +L+++++KC I A F +++ +W+ M+ Y + +
Sbjct: 400 KLGFASNDKIEGALLNLYAKCSDIETALNYFLETEVENVVLWNVMLVAYGLLDDLRNSFR 459
Query: 420 LFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKS-MQSNFGIEPSIEHYLC--L 476
+F +MQ +E + P+ Y SIL C G ++ G ++++F + Y+C L
Sbjct: 460 IFRQMQ-IEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTSFQLNA----YVCSVL 514
Query: 477 VDLLGRAGRFDLA 489
+D+ + G+ D A
Sbjct: 515 IDMYAKLGKLDTA 527
>gi|242082165|ref|XP_002445851.1| hypothetical protein SORBIDRAFT_07g026890 [Sorghum bicolor]
gi|241942201|gb|EES15346.1| hypothetical protein SORBIDRAFT_07g026890 [Sorghum bicolor]
Length = 1084
Score = 362 bits (928), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 197/608 (32%), Positives = 323/608 (53%), Gaps = 9/608 (1%)
Query: 11 FEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTG 70
FEE+L + M + G+ + +LK ++ DG H +++K+GF V
Sbjct: 391 FEESLLLFEQMHELGITPDEHALSCLLKCITCLSCARDGLVAHGYLVKLGFGTQCAVCNA 450
Query: 71 LIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLE 130
LI Y+K + ++ V D MP + +SWNS+IS + LN EAI + MW+ G E
Sbjct: 451 LISFYAKSNMIDNAVLVFDRMP--HQDTISWNSVISGCTSNGLNSEAIELFVRMWMQGHE 508
Query: 131 LSASTFVSVVSGCSFRQ----GISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARS 186
L ++T +SV+ C+ G +H K GL+ E LAN+++ MY+ +
Sbjct: 509 LDSTTLLSVLPACARSHYWFVGRVVHGYSVKTGLIG-ETSLANALLDMYSNCSDWHSTNQ 567
Query: 187 IFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGN 246
IF + + ++VSWT +I Y G ++ GL +M + PD+ +++ G A +
Sbjct: 568 IFRNMAQKNVVSWTAMITSYTRAGLFDKVAGLLQEMVLDGIKPDVFAVTSVLHGFAGDES 627
Query: 247 LFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGG 306
L S+H +++G P+ N L+ MY C ++E AR VFD V K + W ++IGG
Sbjct: 628 LKQGKSVHGYAIRNGMEKLLPVANALMEMYVNCRNMEEARLVFDHVTNKDIISWNTLIGG 687
Query: 307 YAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESN 366
Y++ + +E+ +LF +L +PN T+ L A A + SL +G+EI Y + G +
Sbjct: 688 YSRNNFANESFSLFSDML-LQFKPNTVTMTCILPAVASISSLERGREIHAYALRRGFLED 746
Query: 367 RQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQH 426
+L+ M+ KCG + A+ +F+R+ K+L W+ MI GY +HG G A+ LF +M+
Sbjct: 747 SYTSNALVDMYVKCGALLVARVLFDRLTKKNLISWTIMIAGYGMHGCGKDAVALFEQMRG 806
Query: 427 VEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRF 486
G++PD +++IL AC HSG+ +G FF +M+ + IEP ++HY C+VDLL G
Sbjct: 807 -SGVEPDTASFSAILYACCHSGLTAEGWKFFNAMRKEYKIEPKLKHYTCIVDLLSHTGNL 865
Query: 487 DLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLF 546
A + I MP+E + +W LL C H +V+L E A + L P +TG Y+L+AN++
Sbjct: 866 KEAFEFIESMPIEPDSSIWVSLLHGCRIHRDVKLAEKVADRVFKLEPENTGYYVLLANIY 925
Query: 547 TSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKELH 606
A W+ + + R L + G S +E+ G V VF+A +R+H I + L +
Sbjct: 926 AEAERWEAVKKLKNKIGGRGLRENTGCSWIEVRGKVHVFIADNRNHPEWNRIAEFLDHVA 985
Query: 607 IKLLEAGY 614
++ E G+
Sbjct: 986 RRMREEGH 993
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 129/422 (30%), Positives = 219/422 (51%), Gaps = 20/422 (4%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+I T+NG E + + M G +S T VL ACA + + G+ VH + +K G
Sbjct: 482 VISGCTSNGLNSEAIELFVRMWMQGHELDSTTLLSVLPACARSHYWFVGRVVHGYSVKTG 541
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+ + L+DMYS CSD+ S+ ++ M ++VVSW ++I++++RA L D+ +
Sbjct: 542 LIGETSLANALLDMYSNCSDWHSTNQIFRNMA--QKNVVSWTAMITSYTRAGLFDKVAGL 599
Query: 121 LKEMWVLGLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
L+EM + G++ SV+ G S +QG S+H + G + +P+AN++M MY
Sbjct: 600 LQEMVLDGIKPDVFAVTSVLHGFAGDESLKQGKSVHGYAIRNG-MEKLLPVANALMEMYV 658
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
+ EAR +FD + I+SW T+IGGY NE+F L + M + P+ V
Sbjct: 659 NCRNMEEARLVFDHVTNKDIISWNTLIGGYSRNNFANESFSLFSDM-LLQFKPNTVTMTC 717
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
++ A + +L +H+ L+ G+ + N LV MY KCG L +AR +FD + +K+
Sbjct: 718 ILPAVASISSLERGREIHAYALRRGFLEDSYTSNALVDMYVKCGALLVARVLFDRLTKKN 777
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEE 356
+ WT MI GY G +AV LF+++ + V P+ A+ + L AC G ++G
Sbjct: 778 LISWTIMIAGYGMHGCGKDAVALFEQMRGSGVEPDTASFSAILYACCHSGLTAEG----- 832
Query: 357 YIVLNGLESNRQVQTSLIH------MFSKCGRINKAKEVFERVP-DKDLAVWSAMINGYA 409
+ N + +++ L H + S G + +A E E +P + D ++W ++++G
Sbjct: 833 WKFFNAMRKEYKIEPKLKHYTCIVDLLSHTGNLKEAFEFIESMPIEPDSSIWVSLLHGCR 892
Query: 410 IH 411
IH
Sbjct: 893 IH 894
Score = 199 bits (505), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 146/490 (29%), Positives = 231/490 (47%), Gaps = 31/490 (6%)
Query: 9 GSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQ 68
G F+E +S + M GV ++ VLK A++ SI +G+ +H + K+G + V
Sbjct: 177 GDFQEGVSLFRQMQCCGVSPDAHAVSCVLKCIASLGSITEGEVIHGLLEKLGLGEACAVA 236
Query: 69 TGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLG 128
LI +YS+C + +V D M R +SWNS IS + +D A+ + +MW G
Sbjct: 237 NALIALYSRCGCMEDAMQVFDSM--HARDAISWNSTISGYFSNGWHDRAVDLFSKMWSEG 294
Query: 129 LELSASTFVSVVSGCS---FR-QGISMHCCVYKLGLLNN--------EIPLANSVMSMYA 176
E+S+ T +SV+ C+ F G +H K GLL + + L + ++ MY
Sbjct: 295 TEISSVTVLSVLPACAELGFELVGKVVHGYSMKSGLLWDLESVQSGIDEALGSKLVFMYV 354
Query: 177 KFGKVNEARSIFDEI-GETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPD---LV 232
K G + AR +FD + + ++ W I+GGY E+ L QM + +TPD L
Sbjct: 355 KCGDMGSARRVFDAMPSKGNVHVWNLIMGGYAKAAEFEESLLLFEQMHELGITPDEHALS 414
Query: 233 VFLNLI--LGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFD 290
L I L CA+ G L H L+K G+ + + N L+S Y K ++ A VFD
Sbjct: 415 CLLKCITCLSCARDG-----LVAHGYLVKLGFGTQCAVCNALISFYAKSNMIDNAVLVFD 469
Query: 291 AVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSK 350
+ + W S+I G G SEA+ LF R+ + TL + L ACA
Sbjct: 470 RMPHQDTISWNSVISGCTSNGLNSEAIELFVRMWMQGHELDSTTLLSVLPACARSHYWFV 529
Query: 351 GKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAI 410
G+ + Y V GL + +L+ M+S C + ++F + K++ W+AMI Y
Sbjct: 530 GRVVHGYSVKTGLIGETSLANALLDMYSNCSDWHSTNQIFRNMAQKNVVSWTAMITSYTR 589
Query: 411 HGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSI 470
G+ D+ L +M ++G+KPD TS+L H D+ L KS+ + I +
Sbjct: 590 AGLFDKVAGLLQEMV-LDGIKPDVFAVTSVL----HGFAGDESLKQGKSVH-GYAIRNGM 643
Query: 471 EHYLCLVDLL 480
E L + + L
Sbjct: 644 EKLLPVANAL 653
Score = 199 bits (505), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 131/450 (29%), Positives = 226/450 (50%), Gaps = 17/450 (3%)
Query: 7 NNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQD-A 65
+NG + + +S M G +S T VL ACA + GK VH + +K G D
Sbjct: 276 SNGWHDRAVDLFSKMWSEGTEISSVTVLSVLPACAELGFELVGKVVHGYSMKSGLLWDLE 335
Query: 66 FVQTG--------LIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEA 117
VQ+G L+ MY KC D S+R+V D MP + +V WN I+ +++A +E+
Sbjct: 336 SVQSGIDEALGSKLVFMYVKCGDMGSARRVFDAMPSK-GNVHVWNLIMGGYAKAAEFEES 394
Query: 118 ILVLKEMWVLGL---ELSASTFVSVVSGCSF-RQGISMHCCVYKLGLLNNEIPLANSVMS 173
+L+ ++M LG+ E + S + ++ S R G+ H + KLG + + N+++S
Sbjct: 395 LLLFEQMHELGITPDEHALSCLLKCITCLSCARDGLVAHGYLVKLG-FGTQCAVCNALIS 453
Query: 174 MYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVV 233
YAK ++ A +FD + +SW ++I G + G +EA L +M D
Sbjct: 454 FYAKSNMIDNAVLVFDRMPHQDTISWNSVISGCTSNGLNSEAIELFVRMWMQGHELDSTT 513
Query: 234 FLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVL 293
L+++ CA+ F+ +H +K+G E L N L+ MY+ C D ++F +
Sbjct: 514 LLSVLPACARSHYWFVGRVVHGYSVKTGLIGETSLANALLDMYSNCSDWHSTNQIFRNMA 573
Query: 294 EKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKE 353
+K+V WT+MI Y + G + L + ++ ++P+ + + L A SL +GK
Sbjct: 574 QKNVVSWTAMITSYTRAGLFDKVAGLLQEMVLDGIKPDVFAVTSVLHGFAGDESLKQGKS 633
Query: 354 IEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGM 413
+ Y + NG+E V +L+ M+ C + +A+ VF+ V +KD+ W+ +I GY+ +
Sbjct: 634 VHGYAIRNGMEKLLPVANALMEMYVNCRNMEEARLVFDHVTNKDIISWNTLIGGYSRNNF 693
Query: 414 GDQALNLFYKMQHVEGLKPDAVVYTSILSA 443
+++ +LF M + KP+ V T IL A
Sbjct: 694 ANESFSLFSDM--LLQFKPNTVTMTCILPA 721
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 126/432 (29%), Positives = 220/432 (50%), Gaps = 19/432 (4%)
Query: 32 TFPLVLKACANINSIWDGKRVHSHVLK-VGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDE 90
++ V++ C S+ +R H+ V G + + L+ Y KC D +R V DE
Sbjct: 96 SYCAVVQLCGEERSLEAARRAHALVRAGTGGIIGSVLGKRLVLAYLKCGDLGGARMVFDE 155
Query: 91 MPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGC-----SF 145
MP R+ V W S++SA+++A E + + ++M G+ A VS V C S
Sbjct: 156 MPPRVADVRVWTSLMSAYAKAGDFQEGVSLFRQMQCCGVSPDAHA-VSCVLKCIASLGSI 214
Query: 146 RQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGG 205
+G +H + KLGL +AN+++++Y++ G + +A +FD + +SW + I G
Sbjct: 215 TEGEVIHGLLEKLGL-GEACAVANALIALYSRCGCMEDAMQVFDSMHARDAISWNSTISG 273
Query: 206 YVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGY--- 262
Y + G + A L ++M V L+++ CA++G + +H +KSG
Sbjct: 274 YFSNGWHDRAVDLFSKMWSEGTEISSVTVLSVLPACAELGFELVGKVVHGYSMKSGLLWD 333
Query: 263 ------NNEDPLDNLLVSMYTKCGDLELARRVFDAVLEK-SVFLWTSMIGGYAQLGYPSE 315
++ L + LV MY KCGD+ ARRVFDA+ K +V +W ++GGYA+ E
Sbjct: 334 LESVQSGIDEALGSKLVFMYVKCGDMGSARRVFDAMPSKGNVHVWNLIMGGYAKAAEFEE 393
Query: 316 AVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIH 375
++ LF+++ + + P+E L+ L L G Y+V G + V +LI
Sbjct: 394 SLLLFEQMHELGITPDEHALSCLLKCITCLSCARDGLVAHGYLVKLGFGTQCAVCNALIS 453
Query: 376 MFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAV 435
++K I+ A VF+R+P +D W+++I+G +G+ +A+ LF +M ++G + D+
Sbjct: 454 FYAKSNMIDNAVLVFDRMPHQDTISWNSVISGCTSNGLNSEAIELFVRMW-MQGHELDST 512
Query: 436 VYTSILSACSHS 447
S+L AC+ S
Sbjct: 513 TLLSVLPACARS 524
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 102/364 (28%), Positives = 179/364 (49%), Gaps = 27/364 (7%)
Query: 167 LANSVMSMYAKFGKVNEARSIFDEIGE--TSIVSWTTIIGGYVNVGNVNEAFGLCNQMRR 224
L ++ Y K G + AR +FDE+ + WT+++ Y G+ E L QM+
Sbjct: 132 LGKRLVLAYLKCGDLGGARMVFDEMPPRVADVRVWTSLMSAYAKAGDFQEGVSLFRQMQC 191
Query: 225 MSVTPDLVVFLNLILGC-AQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLE 283
V+PD ++ +L C A +G++ +H LL K G + N L+++Y++CG +E
Sbjct: 192 CGVSPDAHA-VSCVLKCIASLGSITEGEVIHGLLEKLGLGEACAVANALIALYSRCGCME 250
Query: 284 LARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACA 343
A +VFD++ + W S I GY G+ AV+LF ++ + T+ + L ACA
Sbjct: 251 DAMQVFDSMHARDAISWNSTISGYFSNGWHDRAVDLFSKMWSEGTEISSVTVLSVLPACA 310
Query: 344 ELGSLSKGKEIEEYIVLNG----LES-----NRQVQTSLIHMFSKCGRINKAKEVFERVP 394
ELG GK + Y + +G LES + + + L+ M+ KCG + A+ VF+ +P
Sbjct: 311 ELGFELVGKVVHGYSMKSGLLWDLESVQSGIDEALGSKLVFMYVKCGDMGSARRVFDAMP 370
Query: 395 DK-DLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILS-----ACSHSG 448
K ++ VW+ ++ GYA +++L LF +M H G+ PD + +L +C+ G
Sbjct: 371 SKGNVHVWNLIMGGYAKAAEFEESLLLFEQM-HELGITPDEHALSCLLKCITCLSCARDG 429
Query: 449 MVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPL 508
+V G ++ FG + ++ + L+ ++ D A+ MP + W +
Sbjct: 430 LVAHGY----LVKLGFGTQCAVCN--ALISFYAKSNMIDNAVLVFDRMPHQ-DTISWNSV 482
Query: 509 LSAC 512
+S C
Sbjct: 483 ISGC 486
>gi|449462814|ref|XP_004149135.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Cucumis sativus]
gi|449523485|ref|XP_004168754.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Cucumis sativus]
Length = 687
Score = 361 bits (927), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 217/660 (32%), Positives = 343/660 (51%), Gaps = 77/660 (11%)
Query: 29 NSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVL 88
+S F +L CA S D RVH+ ++K F + F+Q LID+Y KC +RK+
Sbjct: 18 DSSPFSKLLNQCARSRSARDTSRVHACIIKSPFASETFIQNRLIDVYGKCGCVDVARKLF 77
Query: 89 DEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEM-------W---VLGLE-------- 130
D M R ++ SWNSII A +++ D+A+ + ++M W + G E
Sbjct: 78 DRMLER--NIFSWNSIICAFTKSGFLDDAVHIFEKMPQVDQCSWNSMISGFEQHGRFDEA 135
Query: 131 -------------LSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMS 173
++ +F S +S C+ + G +H VY+ L+ ++ + ++++
Sbjct: 136 LVYFAQMHGHGFLVNEYSFGSALSACAGLQDLKLGSQIHSLVYRSNYLS-DVYMGSALVD 194
Query: 174 MYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVV 233
MY+K G+V A+S+FDE+ S VSW ++I Y G V+EA + +M + V PD V
Sbjct: 195 MYSKCGRVEYAQSVFDEMTVRSRVSWNSLITCYEQNGPVDEALKIFVEMIKCGVEPDEVT 254
Query: 234 FLNLILGCAQVGNLFLALSMHSLLLKSG-YNNEDPLDNLLVSMYTKCGDLELARRVFDAV 292
+++ CA + + +H+ ++K + N+ L N L+ MY KC + AR +FD +
Sbjct: 255 LASVVSACATISAIKEGQQIHARVVKCDEFRNDLILGNALLDMYAKCNRINEARIIFDMM 314
Query: 293 LEKSVFLWTSMIGGYA-------------------------------QLGYPSEAVNLFK 321
+SV TSM+ GYA Q G EA+ LF+
Sbjct: 315 PIRSVVSETSMVSGYAKASKVKVARYMFSNMMVKDVITWNALIAGCTQNGENEEALILFR 374
Query: 322 RLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGL------ESNRQVQTSLIH 375
L + SV P T L+ACA L L G++ +++ +G +S+ V SLI
Sbjct: 375 LLKRESVWPTHYTFGNLLNACANLADLQLGRQAHSHVLKHGFRFQYGEDSDVFVGNSLID 434
Query: 376 MFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAV 435
M+ KCG + VF+ + +KD W+AMI GYA +G G++AL +F KM G PD V
Sbjct: 435 MYMKCGSVENGCRVFQHMLEKDCVSWNAMIVGYAQNGFGNKALEVFCKMLE-SGEAPDHV 493
Query: 436 VYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHE 495
+L ACSH+G++D+G +F+SM + G+ P +HY C+VDLLGRAG + A I E
Sbjct: 494 TMIGVLCACSHAGLLDEGRYYFRSMTAQHGLMPLKDHYTCMVDLLGRAGYLEEAKNLIEE 553
Query: 496 MPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEA 555
M ++ A VW LL+AC H N++LGEY K LL ++P ++G Y+L++N++ WK
Sbjct: 554 MSMQPDAIVWGSLLAACKVHRNIQLGEYVVKKLLEVDPENSGPYVLLSNMYAENRDWKNV 613
Query: 556 ATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKELHIKLLEAGYI 615
R LM R + K+PG S +EI G + VF+ D+ H +I L+ + ++ +AGY+
Sbjct: 614 VRVRKLMRQRGVVKQPGCSWIEIQGELNVFMVKDKRHARKKEIYMVLRTILQQMKQAGYV 673
Score = 222 bits (566), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 144/454 (31%), Positives = 223/454 (49%), Gaps = 45/454 (9%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI +G F+E L ++ M G N ++F L ACA + + G ++HS V +
Sbjct: 122 MISGFEQHGRFDEALVYFAQMHGHGFLVNEYSFGSALSACAGLQDLKLGSQIHSLVYRSN 181
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+ D ++ + L+DMYSKC ++ V DEM VR R VSWNS+I+ + + DEA+ +
Sbjct: 182 YLSDVYMGSALVDMYSKCGRVEYAQSVFDEMTVRSR--VSWNSLITCYEQNGPVDEALKI 239
Query: 121 LKEMWVLGLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
EM G+E T SVVS C + ++G +H V K N++ L N+++ MYA
Sbjct: 240 FVEMIKCGVEPDEVTLASVVSACATISAIKEGQQIHARVVKCDEFRNDLILGNALLDMYA 299
Query: 177 KFGKVNEARSIFDE------IGETSIVS-------------------------WTTIIGG 205
K ++NEAR IFD + ETS+VS W +I G
Sbjct: 300 KCNRINEARIIFDMMPIRSVVSETSMVSGYAKASKVKVARYMFSNMMVKDVITWNALIAG 359
Query: 206 YVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYN-- 263
G EA L ++R SV P F NL+ CA + +L L HS +LK G+
Sbjct: 360 CTQNGENEEALILFRLLKRESVWPTHYTFGNLLNACANLADLQLGRQAHSHVLKHGFRFQ 419
Query: 264 -NEDP---LDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNL 319
ED + N L+ MY KCG +E RVF +LEK W +MI GYAQ G+ ++A+ +
Sbjct: 420 YGEDSDVFVGNSLIDMYMKCGSVENGCRVFQHMLEKDCVSWNAMIVGYAQNGFGNKALEV 479
Query: 320 FKRLLKTSVRPNEATLATTLSACAELGSLSKGK-EIEEYIVLNGLESNRQVQTSLIHMFS 378
F ++L++ P+ T+ L AC+ G L +G+ +GL + T ++ +
Sbjct: 480 FCKMLESGEAPDHVTMIGVLCACSHAGLLDEGRYYFRSMTAQHGLMPLKDHYTCMVDLLG 539
Query: 379 KCGRINKAKEVFERVP-DKDLAVWSAMINGYAIH 411
+ G + +AK + E + D VW +++ +H
Sbjct: 540 RAGYLEEAKNLIEEMSMQPDAIVWGSLLAACKVH 573
>gi|357118480|ref|XP_003560982.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g30700-like [Brachypodium distachyon]
Length = 796
Score = 361 bits (927), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 208/571 (36%), Positives = 322/571 (56%), Gaps = 14/571 (2%)
Query: 50 KRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHS 109
+ +H+ + GF D FV + L +Y S +RKV D +P V WN++++ S
Sbjct: 143 RPLHALAVASGFAADNFVASALAKLYFTLSRGNDARKVFDAVPSP--DTVLWNTLLAGLS 200
Query: 110 RACLNDEAILVLKEMWVLG-LELSASTFVSVVSGCSFRQGISMHCCVY----KLGLLNNE 164
EA+ M G + ++T SV+ + +M CV+ K GL +E
Sbjct: 201 ----GSEALEAFVRMAGAGSVRPDSTTLASVLPAAAEVANTTMGRCVHAFGEKCGLAQHE 256
Query: 165 IPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRR 224
+ ++S+YAK G + AR +FD + +V++ +I GY G V + L ++
Sbjct: 257 -HVVTGLISLYAKCGDMECARHLFDRMEGPDLVTYNALISGYSINGMVGSSVELFKELVG 315
Query: 225 MSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLEL 284
M + P + LI + G+ LA +H+ ++K+G + P+ L ++Y + D++
Sbjct: 316 MGLRPSSSTLVALIPVHSPFGHEPLAGCLHAHVVKAGLDANAPVSTALTTLYCRFNDMDS 375
Query: 285 ARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAE 344
ARR FDA+ EK++ W +MI GYAQ G AV LF+++ +VRPN T+++ LSACA+
Sbjct: 376 ARRAFDAMPEKTMESWNAMISGYAQNGLTEMAVALFQQMQALNVRPNPLTISSALSACAQ 435
Query: 345 LGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAM 404
LG+LS GK + + I LE N V T+LI M+ KCG I +A+ +F+ + +K++ W+ M
Sbjct: 436 LGALSLGKWVHKIIANEKLELNVYVMTALIDMYVKCGSIAEARCIFDSMDNKNVVSWNVM 495
Query: 405 INGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNF 464
I+GY +HG G +AL L+ M L P + + S+L ACSH G+V +G + F+SM S++
Sbjct: 496 ISGYGLHGQGAEALKLYKDMMDAH-LHPTSSTFLSVLYACSHGGLVKEGTTVFRSMTSDY 554
Query: 465 GIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVE-VQAQVWAPLLSACMKHHNVELGEY 523
GI P IEH C+VDLLGRAG+ A + I E P V +W LL ACM H + +L +
Sbjct: 555 GITPGIEHCTCMVDLLGRAGQLKEAFELISEFPKSAVGPGIWGALLGACMVHKDGDLAKL 614
Query: 524 AAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQ 583
A++ L L P +TG Y+L++NL+TS + EAA R R+L K PG + +EI
Sbjct: 615 ASQKLFELEPENTGYYVLLSNLYTSKKQYSEAAVVRQEAKSRKLVKTPGCTLIEIGDRPH 674
Query: 584 VFVAGDRSHHLSVDIRKTLKELHIKLLEAGY 614
VF+AGDR+H S I L++L K++EAGY
Sbjct: 675 VFMAGDRAHPQSDAIYLYLEKLTAKMIEAGY 705
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 127/452 (28%), Positives = 218/452 (48%), Gaps = 36/452 (7%)
Query: 10 SFEETLSTYSSMLQTG-VHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQ 68
S E L + M G V +S T VL A A + + G+ VH+ K G Q V
Sbjct: 200 SGSEALEAFVRMAGAGSVRPDSTTLASVLPAAAEVANTTMGRCVHAFGEKCGLAQHEHVV 259
Query: 69 TGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLG 128
TGLI +Y+KC D +R + D M +V++N++IS +S + ++ + KE+ +G
Sbjct: 260 TGLISLYAKCGDMECARHLFDRM--EGPDLVTYNALISGYSINGMVGSSVELFKELVGMG 317
Query: 129 LELSASTFVSVV-----------SGCSFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAK 177
L S+ST V+++ +GC +H V K GL N P++ ++ ++Y +
Sbjct: 318 LRPSSSTLVALIPVHSPFGHEPLAGC-------LHAHVVKAGLDANA-PVSTALTTLYCR 369
Query: 178 FGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNL 237
F ++ AR FD + E ++ SW +I GY G A L QM+ ++V P+ + +
Sbjct: 370 FNDMDSARRAFDAMPEKTMESWNAMISGYAQNGLTEMAVALFQQMQALNVRPNPLTISSA 429
Query: 238 ILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSV 297
+ CAQ+G L L +H ++ + L+ MY KCG + AR +FD++ K+V
Sbjct: 430 LSACAQLGALSLGKWVHKIIANEKLELNVYVMTALIDMYVKCGSIAEARCIFDSMDNKNV 489
Query: 298 FLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEI--- 354
W MI GY G +EA+ L+K ++ + P +T + L AC+ G + +G +
Sbjct: 490 VSWNVMISGYGLHGQGAEALKLYKDMMDAHLHPTSSTFLSVLYACSHGGLVKEGTTVFRS 549
Query: 355 --EEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDL--AVWSAMINGYAI 410
+Y + G+E T ++ + + G++ +A E+ P + +W A++ +
Sbjct: 550 MTSDYGITPGIEHC----TCMVDLLGRAGQLKEAFELISEFPKSAVGPGIWGALLGACMV 605
Query: 411 HGMGDQALNLFYKMQHVEGLKPDAVVYTSILS 442
H GD A Q + L+P+ Y +LS
Sbjct: 606 HKDGDLAK---LASQKLFELEPENTGYYVLLS 634
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 98/211 (46%), Gaps = 8/211 (3%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI NG E ++ + M V N T L ACA + ++ GK VH +
Sbjct: 394 MISGYAQNGLTEMAVALFQQMQALNVRPNPLTISSALSACAQLGALSLGKWVHKIIANEK 453
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+ + +V T LIDMY KC +R + D M ++VVSWN +IS + EA+ +
Sbjct: 454 LELNVYVMTALIDMYVKCGSIAEARCIFDSMDN--KNVVSWNVMISGYGLHGQGAEALKL 511
Query: 121 LKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
K+M L ++STF+SV+ CS ++G ++ + + I ++ +
Sbjct: 512 YKDMMDAHLHPTSSTFLSVLYACSHGGLVKEGTTVFRSMTSDYGITPGIEHCTCMVDLLG 571
Query: 177 KFGKVNEARSIFDEIGETSIVS--WTTIIGG 205
+ G++ EA + E ++++ W ++G
Sbjct: 572 RAGQLKEAFELISEFPKSAVGPGIWGALLGA 602
>gi|108706064|gb|ABF93859.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|125584837|gb|EAZ25501.1| hypothetical protein OsJ_09324 [Oryza sativa Japonica Group]
Length = 781
Score = 361 bits (927), Expect = 6e-97, Method: Compositional matrix adjust.
Identities = 197/616 (31%), Positives = 334/616 (54%), Gaps = 9/616 (1%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MIR + G L+ Y ML+ G + FTFP+V+K CA + + +G+ H V+K+G
Sbjct: 78 MIRGFADAGLPAGALAAYRGMLEDGARPDRFTFPVVVKCCARLGGLDEGRAAHGMVIKLG 137
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+ D + L+ Y+K + +V D MPVR +V+WN+++ + L A+
Sbjct: 138 LEHDVYTCNSLVAFYAKLGLVEDAERVFDGMPVR--DIVTWNTMVDGYVSNGLGSLALAC 195
Query: 121 LKEMW-VLGLELSASTFVSVVSGCSFR----QGISMHCCVYKLGLLNNEIPLANSVMSMY 175
+EM L ++ + ++ ++ C QG +H V + GL +I + S++ MY
Sbjct: 196 FQEMHDALEVQHDSVGIIAALAACCLEVSSMQGKEIHGYVIRHGL-EQDIKVGTSLLDMY 254
Query: 176 AKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFL 235
K G+V ARS+F + ++V+W +IGGY +EAF QMR + ++V +
Sbjct: 255 CKCGEVAYARSVFATMPLRTVVTWNCMIGGYALNERPDEAFDCFMQMRAEGLQVEVVTAI 314
Query: 236 NLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEK 295
NL+ CAQ + S+H +++ + L+ L+ MY K G +E + ++F + K
Sbjct: 315 NLLAACAQTESSLYGRSVHGYVVRRQFLPHVVLETALLEMYGKVGKVESSEKIFGKIANK 374
Query: 296 SVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIE 355
++ W +MI Y +EA+ LF LL + P+ T++T + A LGSL ++I
Sbjct: 375 TLVSWNNMIAAYMYKEMYTEAITLFLELLNQPLYPDYFTMSTVVPAFVLLGSLRHCRQIH 434
Query: 356 EYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGD 415
YI+ G N + +++HM+++ G + ++E+F+++ KD+ W+ MI GYAIHG G
Sbjct: 435 SYIIGLGYAENTLIMNAVLHMYARSGDVVASREIFDKMVSKDVISWNTMIMGYAIHGQGK 494
Query: 416 QALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLC 475
AL +F +M++ GL+P+ + S+L+ACS SG+VD+G F M +G+ P IEHY C
Sbjct: 495 TALEMFDEMKY-NGLQPNESTFVSVLTACSVSGLVDEGWMHFNLMLQEYGMIPQIEHYGC 553
Query: 476 LVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGS 535
+ DLLGR G L+ I MP++ ++VW LL+A +++++ EYAA+ + L +
Sbjct: 554 MTDLLGREGDLREVLQFIESMPIDPTSRVWGSLLTASRNQNDIDIAEYAAERIFQLEHDN 613
Query: 536 TGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLS 595
TG YI++++++ AG W++ R LM ++ L + S VE+ + F GD SH S
Sbjct: 614 TGCYIVLSSMYADAGRWEDVERVRLLMKEKGLRRTEPISLVELHSTACSFANGDMSHSQS 673
Query: 596 VDIRKTLKELHIKLLE 611
I + L K+ E
Sbjct: 674 RTIHEVSNILSRKIEE 689
Score = 132 bits (332), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 83/278 (29%), Positives = 144/278 (51%), Gaps = 3/278 (1%)
Query: 171 VMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPD 230
V+S+ A+ G+++EA + +I G+ + G A M PD
Sbjct: 48 VVSLAAE-GRMDEAVEALAAVRGPDAFLHNVMIRGFADAGLPAGALAAYRGMLEDGARPD 106
Query: 231 LVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFD 290
F ++ CA++G L + H +++K G ++ N LV+ Y K G +E A RVFD
Sbjct: 107 RFTFPVVVKCCARLGGLDEGRAAHGMVIKLGLEHDVYTCNSLVAFYAKLGLVEDAERVFD 166
Query: 291 AVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKT-SVRPNEATLATTLSACAELGSLS 349
+ + + W +M+ GY G S A+ F+ + V+ + + L+AC S
Sbjct: 167 GMPVRDIVTWNTMVDGYVSNGLGSLALACFQEMHDALEVQHDSVGIIAALAACCLEVSSM 226
Query: 350 KGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYA 409
+GKEI Y++ +GLE + +V TSL+ M+ KCG + A+ VF +P + + W+ MI GYA
Sbjct: 227 QGKEIHGYVIRHGLEQDIKVGTSLLDMYCKCGEVAYARSVFATMPLRTVVTWNCMIGGYA 286
Query: 410 IHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHS 447
++ D+A + F +M+ EGL+ + V ++L+AC+ +
Sbjct: 287 LNERPDEAFDCFMQMR-AEGLQVEVVTAINLLAACAQT 323
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 111/230 (48%), Gaps = 2/230 (0%)
Query: 270 NLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVR 329
+L+VS+ + G ++ A AV FL MI G+A G P+ A+ ++ +L+ R
Sbjct: 46 SLVVSLAAE-GRMDEAVEALAAVRGPDAFLHNVMIRGFADAGLPAGALAAYRGMLEDGAR 104
Query: 330 PNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEV 389
P+ T + CA LG L +G+ ++ GLE + SL+ ++K G + A+ V
Sbjct: 105 PDRFTFPVVVKCCARLGGLDEGRAAHGMVIKLGLEHDVYTCNSLVAFYAKLGLVEDAERV 164
Query: 390 FERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGM 449
F+ +P +D+ W+ M++GY +G+G AL F +M ++ D+V + L+AC
Sbjct: 165 FDGMPVRDIVTWNTMVDGYVSNGLGSLALACFQEMHDALEVQHDSVGIIAALAACCLEVS 224
Query: 450 VDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVE 499
G + + G+E I+ L+D+ + G A MP+
Sbjct: 225 SMQGKEIHGYVIRH-GLEQDIKVGTSLLDMYCKCGEVAYARSVFATMPLR 273
Score = 39.3 bits (90), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 61/139 (43%), Gaps = 6/139 (4%)
Query: 363 LESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFY 422
L R SL+ + GR+++A E V D + + MI G+A G+ AL +
Sbjct: 37 LPPKRGSSKSLVVSLAAEGRMDEAVEALAAVRGPDAFLHNVMIRGFADAGLPAGALAAYR 96
Query: 423 KMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLC--LVDLL 480
M +G +PD + ++ C+ G +D+G + M G+E + Y C LV
Sbjct: 97 GMLE-DGARPDRFTFPVVVKCCARLGGLDEGRA-AHGMVIKLGLEHDV--YTCNSLVAFY 152
Query: 481 GRAGRFDLALKTIHEMPVE 499
+ G + A + MPV
Sbjct: 153 AKLGLVEDAERVFDGMPVR 171
>gi|302780040|ref|XP_002971795.1| hypothetical protein SELMODRAFT_95653 [Selaginella moellendorffii]
gi|300160927|gb|EFJ27544.1| hypothetical protein SELMODRAFT_95653 [Selaginella moellendorffii]
Length = 782
Score = 361 bits (927), Expect = 6e-97, Method: Compositional matrix adjust.
Identities = 210/632 (33%), Positives = 343/632 (54%), Gaps = 21/632 (3%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI G ++ L + M + V T+ +L ACA+ S+ DG +H +L+ G
Sbjct: 77 MIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACASTESLKDGMEIHGQILQQG 136
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMP-VRLRSVVSWNSIISA---HSRACLNDE 116
F+ D FV T LI+MY+KC S R D + R VVSW ++I+A H + L
Sbjct: 137 FEGDVFVGTALINMYNKCG---SVRGAWDSFKRLEHRDVVSWTAMIAACVQHDQFAL--- 190
Query: 117 AILVLKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKL---GLLNNEIPLANSVMS 173
A + + M + G+ + T +V + +S +Y L ++ +++ + NS M+
Sbjct: 191 ARWLYRRMQLDGVVPNKITLYTVFNAYGDPHYLSEGKFIYSLVSSRVMESDVRVMNSAMN 250
Query: 174 MYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVV 233
M+ G + +AR +F+++ + +V+W +I YV N EA L ++++ + + +
Sbjct: 251 MFGNAGLLGDARRLFEDMVDRDVVTWNIVITFYVQNENFGEAVRLFGRLQQDGIKANDIT 310
Query: 234 FLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVL 293
F+ ++ + +L +H L+ ++GY+ + + L+S+Y +C A ++F +
Sbjct: 311 FVLMLNVYTSLTSLAKGKVIHELVKEAGYDRDVVVATALMSLYGRCEAPGQAWKIFVDMG 370
Query: 294 EKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKE 353
K V WT M YAQ G+ EA+ LF+ + RP ATL L CA L +L KG++
Sbjct: 371 SKDVITWTVMCVAYAQNGFRKEALQLFQEMQLEGRRPTSATLVAVLDTCAHLAALQKGRQ 430
Query: 354 IEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGM 413
I +I+ NG V+T+LI+M+ KCG++ +A+ VFE++ +D+ VW++M+ YA HG
Sbjct: 431 IHSHIIENGFRMEMVVETALINMYGKCGKMAEARSVFEKMAKRDILVWNSMLGAYAQHGY 490
Query: 414 GDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHY 473
D+ L LF +MQ ++G K DAV + S+LSA SHSG V DG +F +M +F I P+ E Y
Sbjct: 491 YDETLQLFNQMQ-LDGEKADAVSFVSVLSALSHSGSVTDGYQYFVAMLQDFSITPTPELY 549
Query: 474 LCLVDLLGRAGRF----DLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLL 529
C+VDLLGRAGR D+ LK +P + +W LL AC H+ + + AA+ +L
Sbjct: 550 GCVVDLLGRAGRIQEAVDIVLKLSGCLPDGI---LWMTLLGACRTHNKTDQAKAAAEQVL 606
Query: 530 TLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGD 589
+P +G Y++++N++ +AG W R LM R + KEPG S +EI V F+ GD
Sbjct: 607 ERDPSHSGAYVVLSNVYAAAGDWDGVNRMRKLMRSRGVKKEPGRSSIEILNRVHEFLEGD 666
Query: 590 RSHHLSVDIRKTLKELHIKLLEAGYIAEADIV 621
RSH I L L+ ++ AGYI + ++
Sbjct: 667 RSHPRRHPIYAELDVLNSEMRAAGYIPDTKMI 698
Score = 181 bits (460), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 125/488 (25%), Positives = 236/488 (48%), Gaps = 12/488 (2%)
Query: 33 FPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMP 92
F +L+ C++ ++ G+RVH HV GF+Q+ V LI MY++C +++V +
Sbjct: 8 FVALLQRCSSAKNVDHGRRVHWHVCDRGFEQNNLVCGHLIQMYAQCGSVPEAQQVFE--I 65
Query: 93 VRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGC----SFRQG 148
+ + V +W +I + + D A+ + +M + + T+V++++ C S + G
Sbjct: 66 LERKDVFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACASTESLKDG 125
Query: 149 ISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVN 208
+ +H + + G ++ + ++++MY K G V A F + +VSWT +I V
Sbjct: 126 MEIHGQILQQG-FEGDVFVGTALINMYNKCGSVRGAWDSFKRLEHRDVVSWTAMIAACVQ 184
Query: 209 VGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPL 268
A L +M+ V P+ + + L ++SL+ ++ +
Sbjct: 185 HDQFALARWLYRRMQLDGVVPNKITLYTVFNAYGDPHYLSEGKFIYSLVSSRVMESDVRV 244
Query: 269 DNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSV 328
N ++M+ G L ARR+F+ ++++ V W +I Y Q EAV LF RL + +
Sbjct: 245 MNSAMNMFGNAGLLGDARRLFEDMVDRDVVTWNIVITFYVQNENFGEAVRLFGRLQQDGI 304
Query: 329 RPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKE 388
+ N+ T L+ L SL+KGK I E + G + + V T+L+ ++ +C +A +
Sbjct: 305 KANDITFVLMLNVYTSLTSLAKGKVIHELVKEAGYDRDVVVATALMSLYGRCEAPGQAWK 364
Query: 389 VFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSG 448
+F + KD+ W+ M YA +G +AL LF +MQ +EG +P + ++L C+H
Sbjct: 365 IFVDMGSKDVITWTVMCVAYAQNGFRKEALQLFQEMQ-LEGRRPTSATLVAVLDTCAHLA 423
Query: 449 MVDDGLSFFKSMQSN-FGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAP 507
+ G + N F +E +E L+++ G+ G+ A +++ E + VW
Sbjct: 424 ALQKGRQIHSHIIENGFRMEMVVE--TALINMYGKCGKMAEA-RSVFEKMAKRDILVWNS 480
Query: 508 LLSACMKH 515
+L A +H
Sbjct: 481 MLGAYAQH 488
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 90/323 (27%), Positives = 158/323 (48%), Gaps = 8/323 (2%)
Query: 229 PDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRV 288
PD F+ L+ C+ N+ +H + G+ + + L+ MY +CG + A++V
Sbjct: 3 PDTAFFVALLQRCSSAKNVDHGRRVHWHVCDRGFEQNNLVCGHLIQMYAQCGSVPEAQQV 62
Query: 289 FDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSL 348
F+ + K VF WT MIG Y Q G A+ +F ++ + V P + T L+ACA SL
Sbjct: 63 FEILERKDVFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACASTESL 122
Query: 349 SKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGY 408
G EI I+ G E + V T+LI+M++KCG + A + F+R+ +D+ W+AMI
Sbjct: 123 KDGMEIHGQILQQGFEGDVFVGTALINMYNKCGSVRGAWDSFKRLEHRDVVSWTAMIAAC 182
Query: 409 AIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEP 468
H A L+ +MQ ++G+ P+ + ++ +A + +G F S+ S+ +E
Sbjct: 183 VQHDQFALARWLYRRMQ-LDGVVPNKITLYTVFNAYGDPHYLSEG-KFIYSLVSSRVMES 240
Query: 469 SIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNL 528
+ +++ G AG A + +M V+ W +++ +++ N GE
Sbjct: 241 DVRVMNSAMNMFGNAGLLGDARRLFEDM-VDRDVVTWNIVITFYVQNEN--FGEAVRLFG 297
Query: 529 LTLNPGSTGN---YILMANLFTS 548
G N ++LM N++TS
Sbjct: 298 RLQQDGIKANDITFVLMLNVYTS 320
Score = 98.6 bits (244), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 105/222 (47%), Gaps = 5/222 (2%)
Query: 329 RPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKE 388
+P+ A L C+ ++ G+ + ++ G E N V LI M+++CG + +A++
Sbjct: 2 KPDTAFFVALLQRCSSAKNVDHGRRVHWHVCDRGFEQNNLVCGHLIQMYAQCGSVPEAQQ 61
Query: 389 VFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSG 448
VFE + KD+ W+ MI Y G D+AL +FY+MQ E + P V Y +IL+AC+ +
Sbjct: 62 VFEILERKDVFAWTRMIGIYCQQGDYDRALGMFYQMQE-EDVMPTKVTYVAILNACASTE 120
Query: 449 MVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPL 508
+ DG+ + G E + L+++ + G A + + W +
Sbjct: 121 SLKDGMEIHGQILQQ-GFEGDVFVGTALINMYNKCGSVRGAWDSFKRLE-HRDVVSWTAM 178
Query: 509 LSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSAG 550
++AC++H L + + + G N I + +F + G
Sbjct: 179 IAACVQHDQFALARWLYRRMQL--DGVVPNKITLYTVFNAYG 218
>gi|359489486|ref|XP_002269573.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g33170-like [Vitis vinifera]
Length = 786
Score = 361 bits (926), Expect = 7e-97, Method: Compositional matrix adjust.
Identities = 207/614 (33%), Positives = 339/614 (55%), Gaps = 39/614 (6%)
Query: 13 ETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLI 72
E L + M G N FT+ VL+ C+ + GK++H+H +K F +AFV TGL+
Sbjct: 121 EALELFWEMQYEGERPNQFTWGSVLRVCSMYVLLEKGKQIHAHAIKTQFDSNAFVVTGLV 180
Query: 73 DMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELS 132
DMY+KC + + + + P + R+ V W ++++ +S+ +AI ++M G+E +
Sbjct: 181 DMYAKCKCILEAEYLFELAPDK-RNHVLWTAMVTGYSQNGDGHKAIECFRDMRGEGIECN 239
Query: 133 ASTFVSV------VSGCSFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARS 186
TF S+ +S C F G +H C+ + G N + + ++++ MY+K G ++ AR
Sbjct: 240 QFTFPSILTACGSISACGF--GAQVHGCIVRSGFGAN-VFVGSALVDMYSKCGDLSNARR 296
Query: 187 IFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGN 246
+ + + VSW ++I G V G EA L M + D + +++ + V +
Sbjct: 297 MLETMEVDDPVSWNSMIVGCVRQGLGEEALSLFRIMHLRHMKIDEFTYPSVLNCFSFVMD 356
Query: 247 LFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGG 306
+ A+S+HSL++K+G+ ++N LV MY K G + A VF+ + +K V WTS++ G
Sbjct: 357 MRNAMSVHSLIVKTGFEAYKLVNNALVDMYAKRGYFDYAFDVFEKMTDKDVISWTSLVTG 416
Query: 307 YAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESN 366
G EA+ LF + + P++ +A LSACAEL L GK++ + +GL S+
Sbjct: 417 CVHNGSYEEALRLFCEMRIMGIHPDQIVIAAVLSACAELTVLEFGKQVHANFLKSGLGSS 476
Query: 367 RQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQH 426
V SL+ M++KCG I A +VF+ + +D+ W+A+I GYA +G G
Sbjct: 477 LSVDNSLVSMYAKCGCIEDANKVFDSMEIQDVITWTALIVGYAQNGRGRD---------- 526
Query: 427 VEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRF 486
H+G+V+ G S+F+SM+ +GI+P EHY C++DLLGR+G+
Sbjct: 527 -------------------HAGLVEHGRSYFQSMEEVYGIKPGPEHYACMIDLLGRSGKL 567
Query: 487 DLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLF 546
A + +++M V+ A VW LL+AC H NVELGE AA NL L P + Y+L++NL+
Sbjct: 568 MEAKELLNQMAVQPDATVWKALLAACRVHGNVELGERAANNLFELEPKNAVPYVLLSNLY 627
Query: 547 TSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKELH 606
++AG W+EAA R LM R ++KEPG S +E+ V F++ DRSH + +I + E+
Sbjct: 628 SAAGKWEEAAKTRRLMKLRGVSKEPGCSWIEMSSKVHRFMSEDRSHPRTAEIYSKVDEIM 687
Query: 607 IKLLEAGYIAEADI 620
I + EAGY+ + +
Sbjct: 688 ILIKEAGYVPDMNF 701
Score = 209 bits (532), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 128/433 (29%), Positives = 229/433 (52%), Gaps = 38/433 (8%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
M+ + NG + + + M G+ N FTFP +L AC +I++ G +VH +++ G
Sbjct: 211 MVTGYSQNGDGHKAIECFRDMRGEGIECNQFTFPSILTACGSISACGFGAQVHGCIVRSG 270
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F + FV + L+DMYSKC D ++R++L+ M V VSWNS+I R L +EA+ +
Sbjct: 271 FGANVFVGSALVDMYSKCGDLSNARRMLETMEV--DDPVSWNSMIVGCVRQGLGEEALSL 328
Query: 121 LKEMWVLGLELSASTFVSVVSGCSF----RQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
+ M + +++ T+ SV++ SF R +S+H + K G ++ + N+++ MYA
Sbjct: 329 FRIMHLRHMKIDEFTYPSVLNCFSFVMDMRNAMSVHSLIVKTGFEAYKL-VNNALVDMYA 387
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K G + A +F+++ + ++SWT+++ G V+ G+ EA L +MR M + PD +V
Sbjct: 388 KRGYFDYAFDVFEKMTDKDVISWTSLVTGCVHNGSYEEALRLFCEMRIMGIHPDQIVIAA 447
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
++ CA++ L +H+ LKSG + +DN LVSMY KCG +E A +VFD++ +
Sbjct: 448 VLSACAELTVLEFGKQVHANFLKSGLGSSLSVDNSLVSMYAKCGCIEDANKVFDSMEIQD 507
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEE 356
V WT++I GYAQ G + L + S + +EE
Sbjct: 508 VITWTALIVGYAQNGRGRDHAGLVEH------------------------GRSYFQSMEE 543
Query: 357 YIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVP-DKDLAVWSAMINGYAIHG--- 412
+ G++ + +I + + G++ +AKE+ ++ D VW A++ +HG
Sbjct: 544 ---VYGIKPGPEHYACMIDLLGRSGKLMEAKELLNQMAVQPDATVWKALLAACRVHGNVE 600
Query: 413 MGDQALNLFYKMQ 425
+G++A N ++++
Sbjct: 601 LGERAANNLFELE 613
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 129/493 (26%), Positives = 235/493 (47%), Gaps = 29/493 (5%)
Query: 37 LKACANINSIWDGKRVHSHVLKVGFQQDA------------FVQTGLIDMYSKCSDFVSS 84
+ +C ++S D V S++ K G DA +I Y+ +
Sbjct: 32 VNSCGTVHSSSDSNWVLSNLSKCGRVDDARKLFDVMPDRDECSWNTMIGAYANSGRLNEA 91
Query: 85 RKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCS 144
RK+ E P+R S ++W+S+IS + R + EA+ + EM G + T+ SV+ CS
Sbjct: 92 RKLFYETPIR--SCITWSSLISGYCRYGCDVEALELFWEMQYEGERPNQFTWGSVLRVCS 149
Query: 145 ----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFD-EIGETSIVSW 199
+G +H K +N + ++ MYAK + EA +F+ + + V W
Sbjct: 150 MYVLLEKGKQIHAHAIKTQFDSNAF-VVTGLVDMYAKCKCILEAEYLFELAPDKRNHVLW 208
Query: 200 TTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLK 259
T ++ GY G+ ++A MR + + F +++ C + +H +++
Sbjct: 209 TAMVTGYSQNGDGHKAIECFRDMRGEGIECNQFTFPSILTACGSISACGFGAQVHGCIVR 268
Query: 260 SGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNL 319
SG+ + + LV MY+KCGDL ARR+ + + W SMI G + G EA++L
Sbjct: 269 SGFGANVFVGSALVDMYSKCGDLSNARRMLETMEVDDPVSWNSMIVGCVRQGLGEEALSL 328
Query: 320 FKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSK 379
F+ + ++ +E T + L+ + + + + IV G E+ + V +L+ M++K
Sbjct: 329 FRIMHLRHMKIDEFTYPSVLNCFSFVMDMRNAMSVHSLIVKTGFEAYKLVNNALVDMYAK 388
Query: 380 CGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTS 439
G + A +VFE++ DKD+ W++++ G +G ++AL LF +M+ + G+ PD +V +
Sbjct: 389 RGYFDYAFDVFEKMTDKDVISWTSLVTGCVHNGSYEEALRLFCEMR-IMGIHPDQIVIAA 447
Query: 440 ILSACSHSGMVDDGLSFFKSMQSNF---GIEPSIEHYLCLVDLLGRAGRFDLALKTIHEM 496
+LSAC+ + L F K + +NF G+ S+ LV + + G + A K M
Sbjct: 448 VLSACAELTV----LEFGKQVHANFLKSGLGSSLSVDNSLVSMYAKCGCIEDANKVFDSM 503
Query: 497 PVEVQAQVWAPLL 509
++ W L+
Sbjct: 504 EIQ-DVITWTALI 515
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 98/363 (26%), Positives = 181/363 (49%), Gaps = 26/363 (7%)
Query: 169 NSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVT 228
N+++ YA G++NEAR +F E S ++W+++I GY G EA L +M+
Sbjct: 76 NTMIGAYANSGRLNEARKLFYETPIRSCITWSSLISGYCRYGCDVEALELFWEMQYEGER 135
Query: 229 PDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRV 288
P+ + +++ C+ L +H+ +K+ +++ + LV MY KC + A +
Sbjct: 136 PNQFTWGSVLRVCSMYVLLEKGKQIHAHAIKTQFDSNAFVVTGLVDMYAKCKCILEAEYL 195
Query: 289 FDAVLEK-SVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGS 347
F+ +K + LWT+M+ GY+Q G +A+ F+ + + N+ T + L+AC + +
Sbjct: 196 FELAPDKRNHVLWTAMVTGYSQNGDGHKAIECFRDMRGEGIECNQFTFPSILTACGSISA 255
Query: 348 LSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMING 407
G ++ IV +G +N V ++L+ M+SKCG ++ A+ + E + D W++MI G
Sbjct: 256 CGFGAQVHGCIVRSGFGANVFVGSALVDMYSKCGDLSNARRMLETMEVDDPVSWNSMIVG 315
Query: 408 YAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACS-----------HSGMVDDGLSF 456
G+G++AL+LF ++ H+ +K D Y S+L+ S HS +V G
Sbjct: 316 CVRQGLGEEALSLF-RIMHLRHMKIDEFTYPSVLNCFSFVMDMRNAMSVHSLIVKTGFEA 374
Query: 457 FKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHH 516
+K + + LVD+ + G FD A +M + W L++ C+ +
Sbjct: 375 YKLVNN------------ALVDMYAKRGYFDYAFDVFEKM-TDKDVISWTSLVTGCVHNG 421
Query: 517 NVE 519
+ E
Sbjct: 422 SYE 424
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 78/257 (30%), Positives = 127/257 (49%), Gaps = 9/257 (3%)
Query: 270 NLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVR 329
N ++ Y G L AR++F +S W+S+I GY + G EA+ LF + R
Sbjct: 76 NTMIGAYANSGRLNEARKLFYETPIRSCITWSSLISGYCRYGCDVEALELFWEMQYEGER 135
Query: 330 PNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEV 389
PN+ T + L C+ L KGK+I + + +SN V T L+ M++KC I +A+ +
Sbjct: 136 PNQFTWGSVLRVCSMYVLLEKGKQIHAHAIKTQFDSNAFVVTGLVDMYAKCKCILEAEYL 195
Query: 390 FERVPDK-DLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSG 448
FE PDK + +W+AM+ GY+ +G G +A+ F M+ EG++ + + SIL+AC
Sbjct: 196 FELAPDKRNHVLWTAMVTGYSQNGDGHKAIECFRDMRG-EGIECNQFTFPSILTACGSIS 254
Query: 449 MVDDGLSFFKSM-QSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAP 507
G + +S FG + LVD+ + G A + + M V+ W
Sbjct: 255 ACGFGAQVHGCIVRSGFGANVFVGS--ALVDMYSKCGDLSNARRMLETMEVDDPVS-WNS 311
Query: 508 LLSACMKHHNVELGEYA 524
++ C++ LGE A
Sbjct: 312 MIVGCVRQ---GLGEEA 325
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 66/156 (42%), Gaps = 32/156 (20%)
Query: 329 RPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKE 388
R N + C +L I ++ G + ++ SKCGR++ A++
Sbjct: 3 RLNLGIYTFSRKVCHQLEHTELNHHIRRFVNSCGTVHSSSDSNWVLSNLSKCGRVDDARK 62
Query: 389 VFERVPDKD-------------------------------LAVWSAMINGYAIHGMGDQA 417
+F+ +PD+D WS++I+GY +G +A
Sbjct: 63 LFDVMPDRDECSWNTMIGAYANSGRLNEARKLFYETPIRSCITWSSLISGYCRYGCDVEA 122
Query: 418 LNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDG 453
L LF++MQ+ EG +P+ + S+L CS +++ G
Sbjct: 123 LELFWEMQY-EGERPNQFTWGSVLRVCSMYVLLEKG 157
>gi|413938143|gb|AFW72694.1| hypothetical protein ZEAMMB73_533387 [Zea mays]
Length = 663
Score = 361 bits (926), Expect = 7e-97, Method: Compositional matrix adjust.
Identities = 202/590 (34%), Positives = 324/590 (54%), Gaps = 19/590 (3%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
++R+ + G + L+ YS M H + TF KACA + G+ VH L G
Sbjct: 84 LLRSYSGLGFHRQALALYSQMR----HFDHLTFTFAAKACAGLRLRRHGRAVHGRALAAG 139
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F DA+VQ ++ MY +C D ++ V +P R + VSWN++I+ + + A+ V
Sbjct: 140 FGSDAYVQNAIVSMYMRCRDVAAAEAVFVALPSR--TTVSWNTVITGCVKDGRAERALEV 197
Query: 121 LKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGL---LNNEIPLANSVMSMYAK 177
+ M G+ + ++ VSV+ C+ + + V++L + L + + N+++ MY K
Sbjct: 198 FETMVDRGVCIDRASVVSVLPACAQARDLHTGRAVHRLAVVRGLGKYVAVKNALIDMYGK 257
Query: 178 FGKVNEARSIFDEIG-ETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMS-VTPDLVVFL 235
G + +AR +FDE + +VSWT +IG YV + ++AF L ++M S P+ V
Sbjct: 258 CGSLEDARRVFDEDSYDKDVVSWTVMIGAYVLNDHASKAFALGSEMLVSSEAQPNAVTMA 317
Query: 236 NLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEK 295
+L+ CA + + A H+L ++ G ++ ++ LV Y KCG + V D V+EK
Sbjct: 318 HLLSACASLLSGKHAKCTHALCIRLGLGSDIVVETALVDCYAKCGYMG----VIDMVVEK 373
Query: 296 S---VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGK 352
W + I GY Q +A+ LFKR+L SVRP+ AT+A+ + A AE L +
Sbjct: 374 GSRRTETWNAAISGYTQRDQGKKALALFKRMLAESVRPDSATMASVIPAYAESADLVQAN 433
Query: 353 EIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHG 412
I +++ G + + T LI +++K G + A E+F+ +P+KD+ W+ +I GY +HG
Sbjct: 434 NIHCCLLVRGCLVSTDIATGLIDLYAKAGDLGVAWELFQCLPEKDVVAWTTVIAGYGMHG 493
Query: 413 MGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEH 472
A+ L+ +M + G+ P+ V S+L +CSH+GMVD+GL F M G+ P+ EH
Sbjct: 494 HAQTAMLLYSRMVEL-GVMPNTVTIASLLHSCSHAGMVDEGLRLFNDMHGVHGLMPNAEH 552
Query: 473 YLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLN 532
YLCLVD+LGRAGR + A + I +MP E VW+ LL AC+ H NVE GE AAK+L L
Sbjct: 553 YLCLVDMLGRAGRIEEAYRRIEDMPFEPTVSVWSSLLGACVLHENVEFGEVAAKHLFELE 612
Query: 533 PGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSV 582
P + GNY+L+ ++ +A W + R +M+ L K+PG+ V+ V
Sbjct: 613 PDNVGNYVLLGKVYAAAERWSDVQHLRRVMEGMDLHKDPGYCVVDAKSEV 662
>gi|297834380|ref|XP_002885072.1| hypothetical protein ARALYDRAFT_318289 [Arabidopsis lyrata subsp.
lyrata]
gi|297330912|gb|EFH61331.1| hypothetical protein ARALYDRAFT_318289 [Arabidopsis lyrata subsp.
lyrata]
Length = 1134
Score = 361 bits (926), Expect = 7e-97, Method: Compositional matrix adjust.
Identities = 200/556 (35%), Positives = 322/556 (57%), Gaps = 17/556 (3%)
Query: 71 LIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLE 130
LIDMY KC + + + KV D MP R +VVSW +++S H + ++ + EM G+
Sbjct: 410 LIDMYCKCREQLIAYKVFDSMPER--NVVSWTALMSGHVLNGDLNGSLSLFTEMGRQGIY 467
Query: 131 LSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARS 186
+ TF + + C + +G+ +H K+G + + NS++ MY+K G++NEA
Sbjct: 468 PNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGF-EMMVEVGNSLVDMYSKCGRINEAEK 526
Query: 187 IFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVT--PDLVVFLNLILGCAQV 244
+F + S++SW +I GYV+ G + A M+ + PD +L+ C+
Sbjct: 527 VFRWMVGRSLISWNAMIAGYVHAGYGSRALATFGMMQEAKIKERPDEFTLTSLLKACSST 586
Query: 245 GNLFLALSMHSLLLKSGYN--NEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTS 302
G ++ +H L++SG++ + + LV +Y KCG+L AR+ FD + EK++ W+S
Sbjct: 587 GMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGNLFSARKAFDQIKEKTMISWSS 646
Query: 303 MIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVL-- 360
+I GYAQ G EA+ LFKRL + S + + L++ + A+ L +GK+++ +V
Sbjct: 647 LILGYAQEGDFVEAMGLFKRLQELSSQIDSFVLSSIIGVFADFALLQQGKQMQALVVKLP 706
Query: 361 NGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNL 420
+GLE++ V SL+ M+ KCG +++A++ F + KD+ W+ MI GY HG+G +A+++
Sbjct: 707 SGLETS--VSNSLVDMYLKCGLVDEAEKCFAEMQLKDVISWTVMITGYGKHGLGKKAVSI 764
Query: 421 FYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLL 480
F KM ++PD V Y ++LSACSHSGM+ +G F + GI+P +EHY C+VDLL
Sbjct: 765 FNKMLR-HNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETQGIKPRVEHYACVVDLL 823
Query: 481 GRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYI 540
GRAGR A + MP++ +W LLS C H ++ELG+ K LL ++ + NY+
Sbjct: 824 GRAGRLKEAKHLVDTMPIKPNVGIWQTLLSLCRVHGDIELGKEVGKILLRIDGKNPANYV 883
Query: 541 LMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRK 600
+M+NL+ AG W E AR L + L KE G S VEI+ V F +G+ SH L++ I++
Sbjct: 884 MMSNLYGQAGYWNEQGNARELGSIKGLQKEAGMSWVEIEREVHFFRSGEDSHPLTLVIQE 943
Query: 601 TLKELHIKLLEA-GYI 615
TLKE+ +L E GY+
Sbjct: 944 TLKEVERRLREELGYV 959
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 120/414 (28%), Positives = 213/414 (51%), Gaps = 11/414 (2%)
Query: 8 NGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFV 67
NG +LS ++ M + G++ N FTF LKAC +N++ G ++H LK+GF+ V
Sbjct: 448 NGDLNGSLSLFTEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEV 507
Query: 68 QTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVL 127
L+DMYSKC + KV M RS++SWN++I+ + A A+ M
Sbjct: 508 GNSLVDMYSKCGRINEAEKVFRWMVG--RSLISWNAMIAGYVHAGYGSRALATFGMMQEA 565
Query: 128 GLELSASTF--VSVVSGCS----FRQGISMHCCVYKLGL-LNNEIPLANSVMSMYAKFGK 180
++ F S++ CS G +H + + G + + S++ +Y K G
Sbjct: 566 KIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGN 625
Query: 181 VNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILG 240
+ AR FD+I E +++SW+++I GY G+ EA GL +++ +S D V ++I
Sbjct: 626 LFSARKAFDQIKEKTMISWSSLILGYAQEGDFVEAMGLFKRLQELSSQIDSFVLSSIIGV 685
Query: 241 CAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLW 300
A L M +L++K E + N LV MY KCG ++ A + F + K V W
Sbjct: 686 FADFALLQQGKQMQALVVKLPSGLETSVSNSLVDMYLKCGLVDEAEKCFAEMQLKDVISW 745
Query: 301 TSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEI-EEYIV 359
T MI GY + G +AV++F ++L+ ++ P+E LSAC+ G + +G+E+ + +
Sbjct: 746 TVMITGYGKHGLGKKAVSIFNKMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLE 805
Query: 360 LNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDK-DLAVWSAMINGYAIHG 412
G++ + ++ + + GR+ +AK + + +P K ++ +W +++ +HG
Sbjct: 806 TQGIKPRVEHYACVVDLLGRAGRLKEAKHLVDTMPIKPNVGIWQTLLSLCRVHG 859
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 107/357 (29%), Positives = 187/357 (52%), Gaps = 17/357 (4%)
Query: 168 ANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSV 227
+N ++ MY K + A +FD + E ++VSWT ++ G+V G++N + L +M R +
Sbjct: 407 SNYLIDMYCKCREQLIAYKVFDSMPERNVVSWTALMSGHVLNGDLNGSLSLFTEMGRQGI 466
Query: 228 TPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARR 287
P+ F + C + L L +H LK G+ + N LV MY+KCG + A +
Sbjct: 467 YPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEK 526
Query: 288 VFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSV--RPNEATLATTLSACAEL 345
VF ++ +S+ W +MI GY GY S A+ F + + + RP+E TL + L AC+
Sbjct: 527 VFRWMVGRSLISWNAMIAGYVHAGYGSRALATFGMMQEAKIKERPDEFTLTSLLKACSST 586
Query: 346 GSLSKGKEIEEYIVLNGLE--SNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSA 403
G + GK+I ++V +G S+ + SL+ ++ KCG + A++ F+++ +K + WS+
Sbjct: 587 GMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGNLFSARKAFDQIKEKTMISWSS 646
Query: 404 MINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQS- 462
+I GYA G +A+ LF ++Q + + D+ V +SI+ + ++ G K MQ+
Sbjct: 647 LILGYAQEGDFVEAMGLFKRLQELSS-QIDSFVLSSIIGVFADFALLQQG----KQMQAL 701
Query: 463 ----NFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKH 515
G+E S+ + LVD+ + G D A K EM ++ W +++ KH
Sbjct: 702 VVKLPSGLETSVSN--SLVDMYLKCGLVDEAEKCFAEMQLK-DVISWTVMITGYGKH 755
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 42/208 (20%), Positives = 96/208 (46%), Gaps = 7/208 (3%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+I G F E + + + + +SF ++ A+ + GK++ + V+K+
Sbjct: 647 LILGYAQEGDFVEAMGLFKRLQELSSQIDSFVLSSIIGVFADFALLQQGKQMQALVVKLP 706
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+ V L+DMY KC + K EM +L+ V+SW +I+ + + L +A+ +
Sbjct: 707 SGLETSVSNSLVDMYLKCGLVDEAEKCFAEM--QLKDVISWTVMITGYGKHGLGKKAVSI 764
Query: 121 LKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
+M +E +++V+S CS ++G + + + + + V+ +
Sbjct: 765 FNKMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETQGIKPRVEHYACVVDLLG 824
Query: 177 KFGKVNEARSIFDEIG-ETSIVSWTTII 203
+ G++ EA+ + D + + ++ W T++
Sbjct: 825 RAGRLKEAKHLVDTMPIKPNVGIWQTLL 852
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 70/137 (51%), Gaps = 2/137 (1%)
Query: 360 LNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALN 419
L+G N LI M+ KC A +VF+ +P++++ W+A+++G+ ++G + +L+
Sbjct: 397 LSGSGLNLITSNYLIDMYCKCREQLIAYKVFDSMPERNVVSWTALMSGHVLNGDLNGSLS 456
Query: 420 LFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDL 479
LF +M +G+ P+ +++ L AC ++ GL G E +E LVD+
Sbjct: 457 LFTEMGR-QGIYPNEFTFSTNLKACGLLNALEKGLQ-IHGFCLKIGFEMMVEVGNSLVDM 514
Query: 480 LGRAGRFDLALKTIHEM 496
+ GR + A K M
Sbjct: 515 YSKCGRINEAEKVFRWM 531
>gi|224103989|ref|XP_002313273.1| predicted protein [Populus trichocarpa]
gi|222849681|gb|EEE87228.1| predicted protein [Populus trichocarpa]
Length = 680
Score = 360 bits (925), Expect = 9e-97, Method: Compositional matrix adjust.
Identities = 209/588 (35%), Positives = 332/588 (56%), Gaps = 11/588 (1%)
Query: 8 NGSFEETLSTYSSM-LQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAF 66
+G + E + + M L++G N + VL CA + G+++H +V+K G
Sbjct: 86 HGFYAEAIHLFCEMNLRSGFRPNMVSIVSVLPVCAGLEDGVTGRQIHCYVVKTGLDSQVT 145
Query: 67 VQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWV 126
V L+D+Y KC SR+V DE + R+ VSWN+II++ + N +A+ + + M
Sbjct: 146 VGNALVDVYGKCGYVKDSRRVFDE--ISERNGVSWNAIITSLAYLERNQDALEMFRLMID 203
Query: 127 LGLELSASTFVS----VVSGCSFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVN 182
G++ ++ TF S +V F G +H + GL ++I +AN+++ MYAK G+
Sbjct: 204 GGVKPNSVTFSSMLPVLVELKLFDFGKEIHGFSLRFGL-ESDIFVANALIDMYAKSGRSL 262
Query: 183 EARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCA 242
+A ++F++IGE +IVSW ++ + A L QM+ P+ V F N++ CA
Sbjct: 263 QASNVFNQIGEKNIVSWNAMVANFAQNRLELAAVDLVRQMQADGEIPNSVTFTNVLPACA 322
Query: 243 QVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTS 302
++G L +H+ +++G + + + N L MY KCG L LARRVF L V +
Sbjct: 323 RIGFLRPGKEIHARAIRTGSSVDLFVSNALTDMYAKCGCLNLARRVFKISLRDEVS-YNI 381
Query: 303 MIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNG 362
+I GY+Q SE++ LF + ++ + + +SACA L +L +GKE+ V
Sbjct: 382 LIIGYSQTTNCSESLRLFLEMGIKGMKLDVVSYMGVISACANLAALKQGKEVHGLAVRKH 441
Query: 363 LESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFY 422
L ++ + +L+ + KCGRI+ A +VF ++P +D A W++MI GY + G A+NLF
Sbjct: 442 LHTHLFIANALLDFYIKCGRIDLAGKVFRQIPSRDTASWNSMILGYGMLGELTIAINLFE 501
Query: 423 KMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGR 482
M+ +G++ D+V Y ++LSACSH G+V++G +F+ MQ I+P+ HY C+VDLLGR
Sbjct: 502 AMKE-DGVEYDSVSYIAVLSACSHGGLVEEGKKYFEHMQVQ-NIKPTQMHYACMVDLLGR 559
Query: 483 AGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILM 542
AG + A+K I +P+E A VW LL AC H +EL +AA++L L P +G Y ++
Sbjct: 560 AGLIEEAVKLIESLPIEPDANVWGALLGACRIHGYIELAHWAAEHLFKLKPQHSGYYSVL 619
Query: 543 ANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDR 590
+N++ AG W EA R LM R K PG S V+ID V FVAG+R
Sbjct: 620 SNMYAEAGKWDEANQVRKLMKSRGAKKNPGCSWVQIDNQVHAFVAGER 667
Score = 225 bits (574), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 169/576 (29%), Positives = 271/576 (47%), Gaps = 56/576 (9%)
Query: 25 GVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSS 84
GV + TFP VLKACA+ S+ G+ +H V K+GF D FV L+ Y C
Sbjct: 2 GVRLDDHTFPFVLKACADSLSVQKGREIHGVVFKLGFDSDVFVGNTLLLFYGNCGGLKDV 61
Query: 85 RKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVL-GLELSASTFVSVVSGC 143
++V DEM R VVSWNS+I S EAI + EM + G + + VSV+ C
Sbjct: 62 KRVFDEMLER--DVVSWNSVIGVFSVHGFYAEAIHLFCEMNLRSGFRPNMVSIVSVLPVC 119
Query: 144 SFRQ----GISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSW 199
+ + G +HC V K GL ++++ + N+++ +Y K G V ++R +FDEI E + VSW
Sbjct: 120 AGLEDGVTGRQIHCYVVKTGL-DSQVTVGNALVDVYGKCGYVKDSRRVFDEISERNGVSW 178
Query: 200 TTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLK 259
II + +A + M V P+ V F +++ ++ +H L+
Sbjct: 179 NAIITSLAYLERNQDALEMFRLMIDGGVKPNSVTFSSMLPVLVELKLFDFGKEIHGFSLR 238
Query: 260 SGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNL 319
G ++ + N L+ MY K G A VF+ + EK++ W +M+ +AQ AV+L
Sbjct: 239 FGLESDIFVANALIDMYAKSGRSLQASNVFNQIGEKNIVSWNAMVANFAQNRLELAAVDL 298
Query: 320 FKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSK 379
+++ PN T L ACA +G L GKEI + G + V +L M++K
Sbjct: 299 VRQMQADGEIPNSVTFTNVLPACARIGFLRPGKEIHARAIRTGSSVDLFVSNALTDMYAK 358
Query: 380 CGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTS 439
CG +N A+ VF ++ +D ++ +I GY+ ++L LF +M ++G+K D V Y
Sbjct: 359 CGCLNLARRVF-KISLRDEVSYNILIIGYSQTTNCSESLRLFLEMG-IKGMKLDVVSYMG 416
Query: 440 ILSACSH-----SGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIH 494
++SAC++ G GL+ K + ++ I + L+D + GR DLA K
Sbjct: 417 VISACANLAALKQGKEVHGLAVRKHLHTHLFIANA------LLDFYIKCGRIDLAGKVFR 470
Query: 495 EMP----------------------------------VEVQAQVWAPLLSACMKHHNVEL 520
++P VE + + +LSAC VE
Sbjct: 471 QIPSRDTASWNSMILGYGMLGELTIAINLFEAMKEDGVEYDSVSYIAVLSACSHGGLVEE 530
Query: 521 GEYAAKNLLTLNPGSTG-NYILMANLFTSAGMWKEA 555
G+ +++ N T +Y M +L AG+ +EA
Sbjct: 531 GKKYFEHMQVQNIKPTQMHYACMVDLLGRAGLIEEA 566
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 77/262 (29%), Positives = 138/262 (52%), Gaps = 3/262 (1%)
Query: 225 MSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLEL 284
M V D F ++ CA ++ +H ++ K G++++ + N L+ Y CG L+
Sbjct: 1 MGVRLDDHTFPFVLKACADSLSVQKGREIHGVVFKLGFDSDVFVGNTLLLFYGNCGGLKD 60
Query: 285 ARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRL-LKTSVRPNEATLATTLSACA 343
+RVFD +LE+ V W S+IG ++ G+ +EA++LF + L++ RPN ++ + L CA
Sbjct: 61 VKRVFDEMLERDVVSWNSVIGVFSVHGFYAEAIHLFCEMNLRSGFRPNMVSIVSVLPVCA 120
Query: 344 ELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSA 403
L G++I Y+V GL+S V +L+ ++ KCG + ++ VF+ + +++ W+A
Sbjct: 121 GLEDGVTGRQIHCYVVKTGLDSQVTVGNALVDVYGKCGYVKDSRRVFDEISERNGVSWNA 180
Query: 404 MINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSN 463
+I A AL +F M G+KP++V ++S+L + D G
Sbjct: 181 IITSLAYLERNQDALEMFRLMID-GGVKPNSVTFSSMLPVLVELKLFDFGKE-IHGFSLR 238
Query: 464 FGIEPSIEHYLCLVDLLGRAGR 485
FG+E I L+D+ ++GR
Sbjct: 239 FGLESDIFVANALIDMYAKSGR 260
Score = 115 bits (288), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 96/380 (25%), Positives = 174/380 (45%), Gaps = 28/380 (7%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
M+ N N + M G NS TF VL ACA I + GK +H+ ++ G
Sbjct: 282 MVANFAQNRLELAAVDLVRQMQADGEIPNSVTFTNVLPACARIGFLRPGKEIHARAIRTG 341
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
D FV L DMY+KC +R+V + LR VS+N +I +S+ E++ +
Sbjct: 342 SSVDLFVSNALTDMYAKCGCLNLARRVF---KISLRDEVSYNILIIGYSQTTNCSESLRL 398
Query: 121 LKEMWVLGLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
EM + G++L +++ V+S C + +QG +H + L+ + +AN+++ Y
Sbjct: 399 FLEMGIKGMKLDVVSYMGVISACANLAALKQGKEVHGLAVR-KHLHTHLFIANALLDFYI 457
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K G+++ A +F +I SW ++I GY +G + A L M+ V D V ++
Sbjct: 458 KCGRIDLAGKVFRQIPSRDTASWNSMILGYGMLGELTIAINLFEAMKEDGVEYDSVSYIA 517
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLD---NLLVSMYTKCGDLELARRVFDAV- 292
++ C+ G L N P +V + + G +E A ++ +++
Sbjct: 518 VLSACSHGG---LVEEGKKYFEHMQVQNIKPTQMHYACMVDLLGRAGLIEEAVKLIESLP 574
Query: 293 LEKSVFLWTSMIG-----GYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSAC-AELG 346
+E +W +++G GY +L + + A +LFK ++P + + LS AE G
Sbjct: 575 IEPDANVWGALLGACRIHGYIELAHWA-AEHLFK------LKPQHSGYYSVLSNMYAEAG 627
Query: 347 SLSKGKEIEEYIVLNGLESN 366
+ ++ + + G + N
Sbjct: 628 KWDEANQVRKLMKSRGAKKN 647
>gi|224125684|ref|XP_002319650.1| predicted protein [Populus trichocarpa]
gi|222858026|gb|EEE95573.1| predicted protein [Populus trichocarpa]
Length = 705
Score = 360 bits (925), Expect = 9e-97, Method: Compositional matrix adjust.
Identities = 199/545 (36%), Positives = 301/545 (55%), Gaps = 33/545 (6%)
Query: 103 SIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKL 158
S +H R LN M L +E+ + SV+ CS R G +H K
Sbjct: 84 SPFESHPRYALN-----TYTYMRKLDIEVDSFIIPSVLKACSQISVARMGKEIHGFSVKN 138
Query: 159 GLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGET----------------------SI 196
GL++ ++ + N++M MY++ G + AR +FD++ E SI
Sbjct: 139 GLVS-DVFVVNALMQMYSECGSLVSARLLFDKMSERDVVSWSTMIRAYITLFYGFSQRSI 197
Query: 197 VSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSL 256
VSWT +I GY+ ++ E L +M +V P+ + L+LI+ C VG + L +H+
Sbjct: 198 VSWTAMIAGYIRCNDLEEGERLFVRMIEENVFPNDITMLSLIISCGFVGAVQLGKRLHAY 257
Query: 257 LLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEA 316
+L++G+ L LV MY KCG++ AR +FD++ K V WT+MI YAQ A
Sbjct: 258 ILRNGFGMSLALATALVDMYGKCGEIRSARAIFDSMKNKDVMTWTAMISAYAQANCIDYA 317
Query: 317 VNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHM 376
LF ++ VRPNE T+ + LS CA G+L GK YI G+E + ++T+LI M
Sbjct: 318 FQLFVQMRDNGVRPNELTMVSLLSLCAVNGALDMGKWFHAYIDKQGVEVDVILKTALIDM 377
Query: 377 FSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVV 436
++KCG I+ A+ +F D+D+ W+ M+ GY +HG G++AL LF +M+ + G+KP+ +
Sbjct: 378 YAKCGDISGAQRLFSEAIDRDICTWNVMMAGYGMHGYGEKALKLFTEMETL-GVKPNDIT 436
Query: 437 YTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEM 496
+ L ACSH+G+V +G F+ M +FG+ P +EHY C+VDLLGRAG D A K I M
Sbjct: 437 FIGALHACSHAGLVVEGKGLFEKMIHDFGLVPKVEHYGCMVDLLGRAGLLDEAYKMIESM 496
Query: 497 PVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAA 556
PV +W +L+AC H N +GE AA+ LL L P + G +LM+N++ +A W + A
Sbjct: 497 PVTPNIAIWGAMLAACKIHKNSNMGELAARELLALEPQNCGYKVLMSNIYAAANRWNDVA 556
Query: 557 TARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKELHIKLLEAGYIA 616
R + D + KEPG S +E++G V F GD +H L I + L E+ KL EAGY+
Sbjct: 557 GMRKAVKDTGIKKEPGMSSIEVNGLVHDFKMGDTAHPLIEKISEMLAEMSKKLKEAGYLP 616
Query: 617 EADIV 621
+ +V
Sbjct: 617 DTSVV 621
Score = 202 bits (514), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 125/432 (28%), Positives = 215/432 (49%), Gaps = 30/432 (6%)
Query: 15 LSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDM 74
L+TY+ M + + +SF P VLKAC+ I+ GK +H +K G D FV L+ M
Sbjct: 94 LNTYTYMRKLDIEVDSFIIPSVLKACSQISVARMGKEIHGFSVKNGLVSDVFVVNALMQM 153
Query: 75 YSKCSDFVSSRKVLDEMPVR--------------------LRSVVSWNSIISAHSRACLN 114
YS+C VS+R + D+M R RS+VSW ++I+ + R
Sbjct: 154 YSECGSLVSARLLFDKMSERDVVSWSTMIRAYITLFYGFSQRSIVSWTAMIAGYIRCNDL 213
Query: 115 DEAILVLKEMWVLGLELSASTFVSVVSGCSF----RQGISMHCCVYKLGLLNNEIPLANS 170
+E + M + + T +S++ C F + G +H + + G + LA +
Sbjct: 214 EEGERLFVRMIEENVFPNDITMLSLIISCGFVGAVQLGKRLHAYILRNG-FGMSLALATA 272
Query: 171 VMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPD 230
++ MY K G++ AR+IFD + +++WT +I Y ++ AF L QMR V P+
Sbjct: 273 LVDMYGKCGEIRSARAIFDSMKNKDVMTWTAMISAYAQANCIDYAFQLFVQMRDNGVRPN 332
Query: 231 LVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFD 290
+ ++L+ CA G L + H+ + K G + L L+ MY KCGD+ A+R+F
Sbjct: 333 ELTMVSLLSLCAVNGALDMGKWFHAYIDKQGVEVDVILKTALIDMYAKCGDISGAQRLFS 392
Query: 291 AVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSK 350
+++ + W M+ GY GY +A+ LF + V+PN+ T L AC+ G + +
Sbjct: 393 EAIDRDICTWNVMMAGYGMHGYGEKALKLFTEMETLGVKPNDITFIGALHACSHAGLVVE 452
Query: 351 GKEIEEYIVLN-GLESNRQVQTSLIHMFSKCGRINKAKEVFERVP-DKDLAVWSAMINGY 408
GK + E ++ + GL + ++ + + G +++A ++ E +P ++A+W AM+
Sbjct: 453 GKGLFEKMIHDFGLVPKVEHYGCMVDLLGRAGLLDEAYKMIESMPVTPNIAIWGAMLAAC 512
Query: 409 AIH---GMGDQA 417
IH MG+ A
Sbjct: 513 KIHKNSNMGELA 524
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 68/249 (27%), Positives = 127/249 (51%), Gaps = 7/249 (2%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI EE + M++ V N T ++ +C + ++ GKR+H+++L+ G
Sbjct: 203 MIAGYIRCNDLEEGERLFVRMIEENVFPNDITMLSLIISCGFVGAVQLGKRLHAYILRNG 262
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F + T L+DMY KC + S+R + D M + + V++W ++ISA+++A D A +
Sbjct: 263 FGMSLALATALVDMYGKCGEIRSARAIFDSM--KNKDVMTWTAMISAYAQANCIDYAFQL 320
Query: 121 LKEMWVLGLELSASTFVSVVSGCSFRQGISM----HCCVYKLGLLNNEIPLANSVMSMYA 176
+M G+ + T VS++S C+ + M H + K G + ++ L +++ MYA
Sbjct: 321 FVQMRDNGVRPNELTMVSLLSLCAVNGALDMGKWFHAYIDKQG-VEVDVILKTALIDMYA 379
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K G ++ A+ +F E + I +W ++ GY G +A L +M + V P+ + F+
Sbjct: 380 KCGDISGAQRLFSEAIDRDICTWNVMMAGYGMHGYGEKALKLFTEMETLGVKPNDITFIG 439
Query: 237 LILGCAQVG 245
+ C+ G
Sbjct: 440 ALHACSHAG 448
>gi|115475988|ref|NP_001061590.1| Os08g0340900 [Oryza sativa Japonica Group]
gi|38423978|dbj|BAD01706.1| PPR-repeat protein-like [Oryza sativa Japonica Group]
gi|38637396|dbj|BAD03655.1| PPR-repeat protein-like [Oryza sativa Japonica Group]
gi|113623559|dbj|BAF23504.1| Os08g0340900 [Oryza sativa Japonica Group]
gi|215686971|dbj|BAG90841.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 819
Score = 360 bits (925), Expect = 9e-97, Method: Compositional matrix adjust.
Identities = 199/607 (32%), Positives = 333/607 (54%), Gaps = 8/607 (1%)
Query: 15 LSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDM 74
L + M GV + F + AC+ + + G+++H + + + D V LID+
Sbjct: 206 LELFDRMGIEGVRPDRFVLASAVSACSALGFLEGGRQIHGYAYRSATETDTSVINVLIDL 265
Query: 75 YSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSAS 134
Y KCS ++RK+ D M R++VSW ++IS + + N EAI + M G +
Sbjct: 266 YCKCSRLSAARKLFDCM--EYRNLVSWTTMISGYMQNSFNAEAITMFWNMTQAGWQPDGF 323
Query: 135 TFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDE 190
S+++ C + QG +H V K L +E + N+++ MYAK + EAR++FD
Sbjct: 324 ACTSILNSCGSLAAIWQGRQIHAHVIKADLEADEY-VKNALIDMYAKCEHLTEARAVFDA 382
Query: 191 IGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLA 250
+ E +S+ +I GY ++ EA + +MR S+ P L+ F++L+ + + L+
Sbjct: 383 LAEDDAISYNAMIEGYSKNRDLAEAVNIFQRMRFFSLRPSLLTFVSLLGVSSSQLAIELS 442
Query: 251 LSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQL 310
+H L++KSG + + + L+ +Y+KC + A+ VF+ + K + +W SMI G+AQ
Sbjct: 443 KQIHGLIIKSGTSLDLYAASALIDVYSKCSLVNDAKTVFNMLHYKDMVIWNSMIFGHAQN 502
Query: 311 GYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQ 370
EA+ LF +LL + + PNE T ++ + L S+ G++ +I+ G++++ V
Sbjct: 503 EQGEEAIKLFNQLLLSGMAPNEFTFVALVTVASTLASMFHGQQFHAWIIKAGVDNDPHVS 562
Query: 371 TSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGL 430
+LI M++KCG I + + +FE +D+ W++MI YA HG ++AL +F M E +
Sbjct: 563 NALIDMYAKCGFIKEGRMLFESTCGEDVICWNSMITTYAQHGHAEEALQVFRLMGEAE-V 621
Query: 431 KPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLAL 490
+P+ V + +LSAC+H+G V +GL+ F SM+SN+ IEP IEHY +V+L GR+G+ A
Sbjct: 622 EPNYVTFVGVLSACAHAGFVGEGLNHFNSMKSNYDIEPGIEHYASVVNLFGRSGKLHAAK 681
Query: 491 KTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSAG 550
+ I MP++ A VW LLSAC N E+G YAA+ L +P +G Y+L++N++ S G
Sbjct: 682 EFIERMPIKPAAAVWRSLLSACHLFGNAEIGRYAAEMALLADPTDSGPYVLLSNIYASKG 741
Query: 551 MWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKELHIKLL 610
+W + R MD KE G S +E+ V F+ R H + I L EL +
Sbjct: 742 LWADVHNLRQQMDSSGTVKETGCSWIEVTKEVHTFIVRGREHPEAELIYSVLDELTSLIK 801
Query: 611 EAGYIAE 617
GY+ +
Sbjct: 802 NLGYVPD 808
Score = 209 bits (533), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 120/423 (28%), Positives = 223/423 (52%), Gaps = 19/423 (4%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI N E ++ + +M Q G + F +L +C ++ +IW G+++H+HV+K
Sbjct: 293 MISGYMQNSFNAEAITMFWNMTQAGWQPDGFACTSILNSCGSLAAIWQGRQIHAHVIKAD 352
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+ D +V+ LIDMY+KC +R V D + +S+N++I +S+ EA+ +
Sbjct: 353 LEADEYVKNALIDMYAKCEHLTEARAVFDALAE--DDAISYNAMIEGYSKNRDLAEAVNI 410
Query: 121 LKEMWVLGLELSASTFVSVVSGCSFRQGISM----HCCVYKLGLLNNEIPLANSVMSMYA 176
+ M L S TFVS++ S + I + H + K G + ++ A++++ +Y+
Sbjct: 411 FQRMRFFSLRPSLLTFVSLLGVSSSQLAIELSKQIHGLIIKSG-TSLDLYAASALIDVYS 469
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K VN+A+++F+ + +V W ++I G+ EA L NQ+ + P+ F+
Sbjct: 470 KCSLVNDAKTVFNMLHYKDMVIWNSMIFGHAQNEQGEEAIKLFNQLLLSGMAPNEFTFVA 529
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
L+ + + ++F H+ ++K+G +N+ + N L+ MY KCG ++ R +F++ +
Sbjct: 530 LVTVASTLASMFHGQQFHAWIIKAGVDNDPHVSNALIDMYAKCGFIKEGRMLFESTCGED 589
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEE 356
V W SMI YAQ G+ EA+ +F+ + + V PN T LSACA G + +G
Sbjct: 590 VICWNSMITTYAQHGHAEEALQVFRLMGEAEVEPNYVTFVGVLSACAHAGFVGEGLN--- 646
Query: 357 YIVLNGLESNRQVQ------TSLIHMFSKCGRINKAKEVFERVPDKD-LAVWSAMINGYA 409
N ++SN ++ S++++F + G+++ AKE ER+P K AVW ++++
Sbjct: 647 --HFNSMKSNYDIEPGIEHYASVVNLFGRSGKLHAAKEFIERMPIKPAAAVWRSLLSACH 704
Query: 410 IHG 412
+ G
Sbjct: 705 LFG 707
Score = 195 bits (496), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 126/496 (25%), Positives = 246/496 (49%), Gaps = 12/496 (2%)
Query: 29 NSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVL 88
N F VL+AC ++ G++VH +K+ + +V T LI++Y+K + V
Sbjct: 119 NEFLLASVLRACTQSKAVSLGEQVHGIAVKLDLDANVYVGTALINLYAKLGCMDEAMLVF 178
Query: 89 DEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCS---- 144
+PV R+ V+WN++I+ +++ A+ + M + G+ S VS CS
Sbjct: 179 HALPV--RTPVTWNTVITGYAQIGCGGVALELFDRMGIEGVRPDRFVLASAVSACSALGF 236
Query: 145 FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIG 204
G +H Y+ + + N ++ +Y K +++ AR +FD + ++VSWTT+I
Sbjct: 237 LEGGRQIHGYAYR-SATETDTSVINVLIDLYCKCSRLSAARKLFDCMEYRNLVSWTTMIS 295
Query: 205 GYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNN 264
GY+ EA + M + PD +++ C + ++ +H+ ++K+
Sbjct: 296 GYMQNSFNAEAITMFWNMTQAGWQPDGFACTSILNSCGSLAAIWQGRQIHAHVIKADLEA 355
Query: 265 EDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLL 324
++ + N L+ MY KC L AR VFDA+ E + +MI GY++ +EAVN+F+R+
Sbjct: 356 DEYVKNALIDMYAKCEHLTEARAVFDALAEDDAISYNAMIEGYSKNRDLAEAVNIFQRMR 415
Query: 325 KTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRIN 384
S+RP+ T + L + ++ K+I I+ +G + ++LI ++SKC +N
Sbjct: 416 FFSLRPSLLTFVSLLGVSSSQLAIELSKQIHGLIIKSGTSLDLYAASALIDVYSKCSLVN 475
Query: 385 KAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSAC 444
AK VF + KD+ +W++MI G+A + G++A+ LF ++ + G+ P+ + ++++
Sbjct: 476 DAKTVFNMLHYKDMVIWNSMIFGHAQNEQGEEAIKLFNQLL-LSGMAPNEFTFVALVTVA 534
Query: 445 SHSGMVDDGLSFFK-SMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQ 503
S + G F +++ +P + + L+D+ + G F + + E
Sbjct: 535 STLASMFHGQQFHAWIIKAGVDNDPHVSN--ALIDMYAKCG-FIKEGRMLFESTCGEDVI 591
Query: 504 VWAPLLSACMKHHNVE 519
W +++ +H + E
Sbjct: 592 CWNSMITTYAQHGHAE 607
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 109/399 (27%), Positives = 209/399 (52%), Gaps = 9/399 (2%)
Query: 52 VHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRA 111
+H+ G D F+ L+ YS +R + D MP R++VSW S+IS +++
Sbjct: 40 IHARATVAGRLDDLFLTNLLLRGYSNLGRLRDARHLFDRMP--HRNLVSWGSVISMYTQH 97
Query: 112 CLNDEAILVLKEMWVLGLELSASTFV-SVVSGCSFRQGISM----HCCVYKLGLLNNEIP 166
+D AI + E+ + SV+ C+ + +S+ H KL L N +
Sbjct: 98 GRDDCAISLFVAFQKASCEVPNEFLLASVLRACTQSKAVSLGEQVHGIAVKLDLDAN-VY 156
Query: 167 LANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMS 226
+ +++++YAK G ++EA +F + + V+W T+I GY +G A L ++M
Sbjct: 157 VGTALINLYAKLGCMDEAMLVFHALPVRTPVTWNTVITGYAQIGCGGVALELFDRMGIEG 216
Query: 227 VTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELAR 286
V PD V + + C+ +G L +H +S + + N+L+ +Y KC L AR
Sbjct: 217 VRPDRFVLASAVSACSALGFLEGGRQIHGYAYRSATETDTSVINVLIDLYCKCSRLSAAR 276
Query: 287 RVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELG 346
++FD + +++ WT+MI GY Q + +EA+ +F + + +P+ + L++C L
Sbjct: 277 KLFDCMEYRNLVSWTTMISGYMQNSFNAEAITMFWNMTQAGWQPDGFACTSILNSCGSLA 336
Query: 347 SLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMIN 406
++ +G++I +++ LE++ V+ +LI M++KC + +A+ VF+ + + D ++AMI
Sbjct: 337 AIWQGRQIHAHVIKADLEADEYVKNALIDMYAKCEHLTEARAVFDALAEDDAISYNAMIE 396
Query: 407 GYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACS 445
GY+ + +A+N+F +M+ L+P + + S+L S
Sbjct: 397 GYSKNRDLAEAVNIFQRMRFFS-LRPSLLTFVSLLGVSS 434
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 85/267 (31%), Positives = 141/267 (52%), Gaps = 8/267 (2%)
Query: 252 SMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLG 311
++H+ +G ++ L NLL+ Y+ G L AR +FD + +++ W S+I Y Q G
Sbjct: 39 AIHARATVAGRLDDLFLTNLLLRGYSNLGRLRDARHLFDRMPHRNLVSWGSVISMYTQHG 98
Query: 312 YPSEAVNLFKRLLKTSVR-PNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQ 370
A++LF K S PNE LA+ L AC + ++S G+++ V L++N V
Sbjct: 99 RDDCAISLFVAFQKASCEVPNEFLLASVLRACTQSKAVSLGEQVHGIAVKLDLDANVYVG 158
Query: 371 TSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGL 430
T+LI++++K G +++A VF +P + W+ +I GYA G G AL LF +M +EG+
Sbjct: 159 TALINLYAKLGCMDEAMLVFHALPVRTPVTWNTVITGYAQIGCGGVALELFDRMG-IEGV 217
Query: 431 KPDAVVYTSILSACSHSGMVDDGLSFFK-SMQSNFGIEPSIEHYLCLVDLLGRAGRFDLA 489
+PD V S +SACS G ++ G + +S + S+ + L+DL + R A
Sbjct: 218 RPDRFVLASAVSACSALGFLEGGRQIHGYAYRSATETDTSVIN--VLIDLYCKCSRLSAA 275
Query: 490 LKTIHEMPVEVQAQV-WAPLLSACMKH 515
K M E + V W ++S M++
Sbjct: 276 RKLFDCM--EYRNLVSWTTMISGYMQN 300
>gi|347954518|gb|AEP33759.1| organelle transcript processing 82, partial [Brassica oleracea]
Length = 691
Score = 360 bits (925), Expect = 9e-97, Method: Compositional matrix adjust.
Identities = 200/614 (32%), Positives = 344/614 (56%), Gaps = 16/614 (2%)
Query: 17 TYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYS 76
T++ M++TG+H ++ +L+ C ++ +DG V + + + + ++ +
Sbjct: 1 THAQMVKTGLHNTNYALSKLLELCV-VSPHFDGLPYAVSVFETXQEPNLLIWNTMLRGLA 59
Query: 77 KCSDFVSSRKVLDEMPVRLRS------VVSWNSIISAHSRACLNDEAILVLKEMWVLGLE 130
SD VS EM VR+ S ++ ++ + +++ +E + ++ LG E
Sbjct: 60 SSSDLVSPL----EMYVRMVSXGHVPNAYTFPFLLKSCAKSKTFEEGRQIHAQVMKLGCE 115
Query: 131 LSASTFVSVVSGCSFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDE 190
L S++S + + V+ ++ ++++ YA G V AR +FD
Sbjct: 116 LDRYAHTSLISMYARNGRLEDARKVFDXSS-QRDVVSCTALITGYASRGDVRSARKVFDX 174
Query: 191 IGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLA 250
I E +VSW +I GYV EA L +M R +V PD ++++ CAQ G++ L
Sbjct: 175 ITERDVVSWNAMITGYVENCGYEEALELFKEMMRTNVRPDEGTLVSVLSACAQSGSIELG 234
Query: 251 LSMHSLLLKS-GYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQ 309
+H+L+ G+ + + N + +Y+KCGD+E+A +F+ + K V W ++IGGY
Sbjct: 235 REIHTLVDDHHGFGSSLKIVNAFIGLYSKCGDVEIASGLFEGLSCKDVVSWNTLIGGYTH 294
Query: 310 LGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYI--VLNGLESNR 367
+ EA+ LF+ +L++ PN+ T+ + L ACA LG++ G+ I YI L G+ +
Sbjct: 295 MNLYKEALLLFQEMLRSGESPNDVTMLSVLPACAHLGAIDIGRWIHVYIDKRLKGVTNGS 354
Query: 368 QVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHV 427
++TSLI M++KCG I A +VF + K L+ W+AMI G+A+HG + A +LF +M+
Sbjct: 355 ALRTSLIDMYAKCGDIEAAHQVFNSMMHKSLSSWNAMIFGFAMHGRANAAFDLFSRMRK- 413
Query: 428 EGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFD 487
G++PD + +LSACSHSG++D G FKS+ ++ I P +EHY C++DLLG AG F
Sbjct: 414 NGIEPDDITLVGLLSACSHSGLLDLGRHIFKSVTQDYNITPKLEHYGCMIDLLGHAGLFK 473
Query: 488 LALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFT 547
A + IH MP+E +W LL AC H N+EL E A+ L+ + P ++G+Y+L++N++
Sbjct: 474 EAEEIIHMMPMEPDGVIWCSLLKACKMHGNLELAESFAQKLMEIEPENSGSYVLLSNIYA 533
Query: 548 SAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKELHI 607
+AG W++ A R +++ + + K PG S +EID V F+ GD+ H S +I + L+E+ +
Sbjct: 534 TAGRWEDVARIREVLNGKGMKKVPGCSSIEIDSVVHEFIIGDKLHPQSREIYRMLEEMDV 593
Query: 608 KLLEAGYIAEADIV 621
L EAG++ + V
Sbjct: 594 LLEEAGFVPDTSEV 607
Score = 216 bits (551), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 134/469 (28%), Positives = 227/469 (48%), Gaps = 45/469 (9%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
M+R ++ L Y M+ G N++TFP +LK+CA + +G+++H+ V+K+G
Sbjct: 54 MLRGLASSSDLVSPLEMYVRMVSXGHVPNAYTFPFLLKSCAKSKTFEEGRQIHAQVMKLG 113
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVR-------------------------- 94
+ D + T LI MY++ +RKV D R
Sbjct: 114 CELDRYAHTSLISMYARNGRLEDARKVFDXSSQRDVVSCTALITGYASRGDVRSARKVFD 173
Query: 95 ---LRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGC----SFRQ 147
R VVSWN++I+ + C +EA+ + KEM + T VSV+S C S
Sbjct: 174 XITERDVVSWNAMITGYVENCGYEEALELFKEMMRTNVRPDEGTLVSVLSACAQSGSIEL 233
Query: 148 GISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYV 207
G +H V + + + N+ + +Y+K G V A +F+ + +VSW T+IGGY
Sbjct: 234 GREIHTLVDDHHGFGSSLKIVNAFIGLYSKCGDVEIASGLFEGLSCKDVVSWNTLIGGYT 293
Query: 208 NVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLK--SGYNNE 265
++ EA L +M R +P+ V L+++ CA +G + + +H + K G N
Sbjct: 294 HMNLYKEALLLFQEMLRSGESPNDVTMLSVLPACAHLGAIDIGRWIHVYIDKRLKGVTNG 353
Query: 266 DPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLK 325
L L+ MY KCGD+E A +VF++++ KS+ W +MI G+A G + A +LF R+ K
Sbjct: 354 SALRTSLIDMYAKCGDIEAAHQVFNSMMHKSLSSWNAMIFGFAMHGRANAAFDLFSRMRK 413
Query: 326 TSVRPNEATLATTLSACAELGSLSKGKEI-----EEYIVLNGLESNRQVQTSLIHMFSKC 380
+ P++ TL LSAC+ G L G+ I ++Y + LE +I +
Sbjct: 414 NGIEPDDITLVGLLSACSHSGLLDLGRHIFKSVTQDYNITPKLEH----YGCMIDLLGHA 469
Query: 381 GRINKAKEVFERVP-DKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVE 428
G +A+E+ +P + D +W +++ +HG + A + K+ +E
Sbjct: 470 GLFKEAEEIIHMMPMEPDGVIWCSLLKACKMHGNLELAESFAQKLMEIE 518
>gi|357477961|ref|XP_003609266.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355510321|gb|AES91463.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 738
Score = 360 bits (925), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 207/619 (33%), Positives = 331/619 (53%), Gaps = 43/619 (6%)
Query: 36 VLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDM--YSKCSDFVSSRKVLDEMPV 93
+L+ C NIN+ K++HS ++K G FVQ+ LI S D + + +E
Sbjct: 34 LLEKCKNINTF---KQIHSLIIKTGLNNTVFVQSKLIHFCAVSPSGDLSYALSLFEENQQ 90
Query: 94 RLR-SVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCS----FRQG 148
+ +V WNS+I +S + ++ + M G++ ++ TF + C+ +G
Sbjct: 91 HHKHNVFIWNSLIRGYSLSSSPLSSLHLFSRMLYYGVQPNSHTFPFLFKSCTKAKATHEG 150
Query: 149 ISMHCCVYKLGLLNNEIPLANSVMSMYAKFGK---------------------------- 180
+H KL L N + SV+ MYA G+
Sbjct: 151 KQLHAHALKLALHFNP-HVHTSVIHMYASVGEMDFARLVFDKSSLRDAVSFTALITGYVS 209
Query: 181 ---VNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNL 237
+++AR +FDEI +VSW +I GYV G EA +M+ +V P+ + +
Sbjct: 210 QGCLDDARRLFDEIPVKDVVSWNAMISGYVQSGRFEEAIVCFYEMQEANVLPNKSTMVVV 269
Query: 238 ILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSV 297
+ C + L + S + +G+ + L N L+ MY KCG+ ++AR +FD + EK V
Sbjct: 270 LSACGHTRSGELGKWIGSWVRDNGFGSNLQLTNALIDMYCKCGETDIARELFDGIEEKDV 329
Query: 298 FLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEY 357
W +MIGGY+ L EA+ LF+ +L+++V+PN+ T L ACA LG+L GK + Y
Sbjct: 330 ISWNTMIGGYSYLSLYEEALALFEVMLRSNVKPNDVTFLGILHACACLGALDLGKWVHAY 389
Query: 358 IVLN-GLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQ 416
I N SN + TSLI M++KCG I A+ VF + ++LA W+AM++G+A+HG ++
Sbjct: 390 IDKNLRNSSNASLWTSLIDMYAKCGCIEAAERVFRSMHSRNLASWNAMLSGFAMHGHAER 449
Query: 417 ALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCL 476
AL LF +M + +PD + + +LSAC+ +G+VD G +F+SM ++GI P ++HY C+
Sbjct: 450 ALALFSEMVNKGLFRPDDITFVGVLSACTQAGLVDLGHQYFRSMIQDYGISPKLQHYGCM 509
Query: 477 VDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGST 536
+DLL RA +F+ A + M +E +W LLSAC H VE GEY A+ L L P +
Sbjct: 510 IDLLARAEKFEEAEILMKNMEMEPDGAIWGSLLSACKAHGRVEFGEYVAERLFQLEPENA 569
Query: 537 GNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSV 596
G ++L++N++ AG W + A R ++D+ + K PG + +EIDG V F+ GD+ H
Sbjct: 570 GAFVLLSNIYAGAGRWDDVARIRTRLNDKGMKKVPGCTSIEIDGDVHEFLVGDKFHPECN 629
Query: 597 DIRKTLKELHIKLLEAGYI 615
+I K L E+ L E G++
Sbjct: 630 NIYKMLNEVDKLLEENGFV 648
Score = 191 bits (486), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 129/431 (29%), Positives = 218/431 (50%), Gaps = 42/431 (9%)
Query: 21 MLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMY----- 75
ML GV NS TFP + K+C + +GK++H+H LK+ + V T +I MY
Sbjct: 122 MLYYGVQPNSHTFPFLFKSCTKAKATHEGKQLHAHALKLALHFNPHVHTSVIHMYASVGE 181
Query: 76 ----------SKCSDFVS----------------SRKVLDEMPVRLRSVVSWNSIISAHS 109
S D VS +R++ DE+PV + VVSWN++IS +
Sbjct: 182 MDFARLVFDKSSLRDAVSFTALITGYVSQGCLDDARRLFDEIPV--KDVVSWNAMISGYV 239
Query: 110 RACLNDEAILVLKEMWVLGLELSASTFVSVVSGCSFRQ----GISMHCCVYKLGLLNNEI 165
++ +EAI+ EM + + ST V V+S C + G + V G +N +
Sbjct: 240 QSGRFEEAIVCFYEMQEANVLPNKSTMVVVLSACGHTRSGELGKWIGSWVRDNGFGSN-L 298
Query: 166 PLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRM 225
L N+++ MY K G+ + AR +FD I E ++SW T+IGGY + EA L M R
Sbjct: 299 QLTNALIDMYCKCGETDIARELFDGIEEKDVISWNTMIGGYSYLSLYEEALALFEVMLRS 358
Query: 226 SVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDP-LDNLLVSMYTKCGDLEL 284
+V P+ V FL ++ CA +G L L +H+ + K+ N+ + L L+ MY KCG +E
Sbjct: 359 NVKPNDVTFLGILHACACLGALDLGKWVHAYIDKNLRNSSNASLWTSLIDMYAKCGCIEA 418
Query: 285 ARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLL-KTSVRPNEATLATTLSACA 343
A RVF ++ +++ W +M+ G+A G+ A+ LF ++ K RP++ T LSAC
Sbjct: 419 AERVFRSMHSRNLASWNAMLSGFAMHGHAERALALFSEMVNKGLFRPDDITFVGVLSACT 478
Query: 344 ELGSLSKGKEIEEYIVLN-GLESNRQVQTSLIHMFSKCGRINKAKEVFERVP-DKDLAVW 401
+ G + G + ++ + G+ Q +I + ++ + +A+ + + + + D A+W
Sbjct: 479 QAGLVDLGHQYFRSMIQDYGISPKLQHYGCMIDLLARAEKFEEAEILMKNMEMEPDGAIW 538
Query: 402 SAMINGYAIHG 412
++++ HG
Sbjct: 539 GSLLSACKAHG 549
>gi|449518693|ref|XP_004166371.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
mitochondrial-like [Cucumis sativus]
Length = 792
Score = 360 bits (925), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 201/617 (32%), Positives = 343/617 (55%), Gaps = 10/617 (1%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI + G + ++ Y ML++G + FTF ++K+C+ ++ +++H+HVLK
Sbjct: 170 MISGYSRYGEEDNAITLYVQMLRSGHIPDHFTFGSIVKSCSGLDDFKLARQLHAHVLKSE 229
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F D Q LI MY+K S + V + ++ ++SW S+I+ S+ EA+
Sbjct: 230 FGADLIAQNALISMYTKFSQMADAINVFSR--IIIKDLISWGSMIAGFSQLGYELEALCH 287
Query: 121 LKEMWVLGL-ELSASTFVSVVSGCSF----RQGISMHCCVYKLGLLNNEIPLANSVMSMY 175
+EM + + + F S S CS G +H K GL +++ S+ MY
Sbjct: 288 FREMLSQSVYQPNEFVFGSAFSACSKLLEPDCGRQIHGLCIKFGL-GSDLFAGCSLCDMY 346
Query: 176 AKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFL 235
AK G + AR++F I + +V+W II G+ +V N E+ +QMR + P+ V L
Sbjct: 347 AKCGFLESARTVFYHIEKPDLVAWNAIIAGFASVSNAKESSSFFSQMRHTGLVPNDVTVL 406
Query: 236 NLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEK 295
+L+ C++ L + +HS ++K G+N + P+ N L+SMY+KC +L A +VF+ + K
Sbjct: 407 SLLCACSEPVMLNHGIQVHSYIVKMGFNLDIPVCNSLLSMYSKCSNLNDALQVFEDIGNK 466
Query: 296 S-VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEI 354
+ + W +++ Q E + L K + + ++P+ TL L + ++ S G +I
Sbjct: 467 ADIVSWNTLLTACLQQNQAGEVLRLTKLMFASRIKPDHVTLTNVLVSSGQIASYEVGSQI 526
Query: 355 EEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMG 414
+I+ +GL + V +LI+M++KCG + A+++F+ + + D+ WS++I GYA G G
Sbjct: 527 HCFIMKSGLNLDISVSNALINMYTKCGSLECARKMFDSIGNPDIISWSSLIVGYAQAGCG 586
Query: 415 DQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYL 474
+A LF M+ + G+KP+ + + IL+ACSH GMV++GL +++MQ ++ I P+ EH
Sbjct: 587 KEAFELFRTMRGL-GVKPNEITFVGILTACSHIGMVEEGLKLYRTMQEDYRISPTKEHCS 645
Query: 475 CLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPG 534
C+VDLL RAG D+A I +MP VW LL+AC H N+E+G+ AA+N+L ++P
Sbjct: 646 CMVDLLARAGCLDVAEDFIRQMPFVPDVVVWKTLLAACKVHGNLEVGKRAAENVLKIDPS 705
Query: 535 STGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHL 594
++ +++ N+ S+G WK+ A R M + K PG S +EI V VF+A D H
Sbjct: 706 NSAAVVMLCNIHASSGHWKDFARLRSSMRRMDVGKVPGQSWIEIKDKVHVFLAEDNLHPE 765
Query: 595 SVDIRKTLKELHIKLLE 611
I L+EL +++L+
Sbjct: 766 RGKIYTMLEELMLQILD 782
Score = 206 bits (525), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 128/418 (30%), Positives = 215/418 (51%), Gaps = 10/418 (2%)
Query: 30 SFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLD 89
S T+ ++ AC+++ S+ G+++H H+L +Q D +Q ++ MY KC +R + D
Sbjct: 98 SVTYTHLINACSSLRSLEHGRKIHRHMLTCNYQPDMILQNHILSMYGKCGSLKEARNMFD 157
Query: 90 EMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCS----F 145
MP L++VVSW S+IS +SR D AI + +M G TF S+V CS F
Sbjct: 158 SMP--LKNVVSWTSMISGYSRYGEEDNAITLYVQMLRSGHIPDHFTFGSIVKSCSGLDDF 215
Query: 146 RQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGG 205
+ +H V K ++ N+++SMY KF ++ +A ++F I ++SW ++I G
Sbjct: 216 KLARQLHAHVLK-SEFGADLIAQNALISMYTKFSQMADAINVFSRIIIKDLISWGSMIAG 274
Query: 206 YVNVGNVNEAFGLCNQMRRMSV-TPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNN 264
+ +G EA +M SV P+ VF + C+++ +H L +K G +
Sbjct: 275 FSQLGYELEALCHFREMLSQSVYQPNEFVFGSAFSACSKLLEPDCGRQIHGLCIKFGLGS 334
Query: 265 EDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLL 324
+ L MY KCG LE AR VF + + + W ++I G+A + E+ + F ++
Sbjct: 335 DLFAGCSLCDMYAKCGFLESARTVFYHIEKPDLVAWNAIIAGFASVSNAKESSSFFSQMR 394
Query: 325 KTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRIN 384
T + PN+ T+ + L AC+E L+ G ++ YIV G + V SL+ M+SKC +N
Sbjct: 395 HTGLVPNDVTVLSLLCACSEPVMLNHGIQVHSYIVKMGFNLDIPVCNSLLSMYSKCSNLN 454
Query: 385 KAKEVFERVPDK-DLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSIL 441
A +VFE + +K D+ W+ ++ + L L K+ +KPD V T++L
Sbjct: 455 DALQVFEDIGNKADIVSWNTLLTACLQQNQAGEVLRL-TKLMFASRIKPDHVTLTNVL 511
Score = 199 bits (505), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 129/429 (30%), Positives = 218/429 (50%), Gaps = 18/429 (4%)
Query: 131 LSASTFVSVVSGCSFRQGISMHCCVYKLGLLNNEIP---LANSVMSMYAKFGKVNEARSI 187
L + T+ +++ CS + + +++ L N P L N ++SMY K G + EAR++
Sbjct: 96 LKSVTYTHLINACSSLRSLEHGRKIHRHMLTCNYQPDMILQNHILSMYGKCGSLKEARNM 155
Query: 188 FDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNL 247
FD + ++VSWT++I GY G + A L QM R PD F +++ C+ + +
Sbjct: 156 FDSMPLKNVVSWTSMISGYSRYGEEDNAITLYVQMLRSGHIPDHFTFGSIVKSCSGLDDF 215
Query: 248 FLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGY 307
LA +H+ +LKS + + N L+SMYTK + A VF ++ K + W SMI G+
Sbjct: 216 KLARQLHAHVLKSEFGADLIAQNALISMYTKFSQMADAINVFSRIIIKDLISWGSMIAGF 275
Query: 308 AQLGYPSEAVNLFKRLLKTSV-RPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESN 366
+QLGY EA+ F+ +L SV +PNE + SAC++L G++I + GL S+
Sbjct: 276 SQLGYELEALCHFREMLSQSVYQPNEFVFGSAFSACSKLLEPDCGRQIHGLCIKFGLGSD 335
Query: 367 RQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQH 426
SL M++KCG + A+ VF + DL W+A+I G+A ++ + F +M+H
Sbjct: 336 LFAGCSLCDMYAKCGFLESARTVFYHIEKPDLVAWNAIIAGFASVSNAKESSSFFSQMRH 395
Query: 427 VEGLKPDAVVYTSILSACSHSGMVDDGL---SFFKSMQSNFGIEPSIEHYLC--LVDLLG 481
GL P+ V S+L ACS M++ G+ S+ M N I +C L+ +
Sbjct: 396 T-GLVPNDVTVLSLLCACSEPVMLNHGIQVHSYIVKMGFNLDIP------VCNSLLSMYS 448
Query: 482 RAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYIL 541
+ + AL+ ++ + W LL+AC++ + + GE L +++
Sbjct: 449 KCSNLNDALQVFEDIGNKADIVSWNTLLTACLQQN--QAGEVLRLTKLMFASRIKPDHVT 506
Query: 542 MANLFTSAG 550
+ N+ S+G
Sbjct: 507 LTNVLVSSG 515
>gi|125542314|gb|EAY88453.1| hypothetical protein OsI_09918 [Oryza sativa Indica Group]
Length = 781
Score = 360 bits (925), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 197/616 (31%), Positives = 333/616 (54%), Gaps = 9/616 (1%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MIR + G L+ Y ML+ G + FTFP+V+K CA + + +G+ H V+K+G
Sbjct: 78 MIRGFADAGLPAGALAAYRGMLEDGARPDRFTFPVVVKCCARLGGLDEGRAAHGMVIKLG 137
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+ D + L+ Y+K + +V D MPVR +V+WN ++ + L A+
Sbjct: 138 LEHDVYTCNSLVAFYAKLGLVEDAERVFDGMPVR--DIVTWNIMVDGYVSNGLGSLALAC 195
Query: 121 LKEMW-VLGLELSASTFVSVVSGCSFR----QGISMHCCVYKLGLLNNEIPLANSVMSMY 175
+EM L ++ + ++ ++ C QG +H V + GL +I + S++ MY
Sbjct: 196 FQEMHDALEVQHDSVGIIAALAACCLEFSSMQGKEIHGYVIRHGL-EQDIKVGTSLLDMY 254
Query: 176 AKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFL 235
K G+V ARS+F + ++V+W +IGGY +EAF QMR + ++V +
Sbjct: 255 CKCGEVAYARSVFATMPLRTVVTWNCMIGGYALNERPDEAFDCFMQMRAEGLQVEVVTAI 314
Query: 236 NLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEK 295
NL+ CAQ + S+H +++ + L+ L+ MY K G +E + ++F + K
Sbjct: 315 NLLAACAQTESSLYGRSVHGYVVRRQFLPHVVLETALLEMYGKVGKVESSEKIFGKIANK 374
Query: 296 SVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIE 355
++ W +MI Y +EA+ LF LL + P+ T++T + A LGSL ++I
Sbjct: 375 TLVSWNNMIAAYMYKEMYTEAITLFLELLNQPLYPDYFTMSTVVPAFVLLGSLRHCRQIH 434
Query: 356 EYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGD 415
YI+ G N + +++HM+++ G + ++E+F+++ KD+ W+ MI GYAIHG G
Sbjct: 435 SYIIGLGYAENTLIMNAVLHMYARSGDVVASREIFDKMVSKDVISWNTMIMGYAIHGQGK 494
Query: 416 QALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLC 475
AL +F +M++ GL+P+ + S+L+ACS SG+VD+G F M +G+ P IEHY C
Sbjct: 495 TALEMFDEMKY-NGLQPNESTFVSVLTACSVSGLVDEGWMHFNLMLQEYGMIPQIEHYGC 553
Query: 476 LVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGS 535
+ DLLGR G L+ I MP++ ++VW LL+A +++++ EYAA+ + L +
Sbjct: 554 MTDLLGREGDLREVLQFIESMPIDPTSRVWGSLLTASRNQNDIDIAEYAAERIFQLEHDN 613
Query: 536 TGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLS 595
TG YI++++++ AG W++ R LM ++ L + S VE+ + F GD SH S
Sbjct: 614 TGCYIVLSSMYADAGRWEDVERVRLLMKEKGLRRTEPISLVELHSTACSFANGDMSHSQS 673
Query: 596 VDIRKTLKELHIKLLE 611
I + L K+ E
Sbjct: 674 RTIHEVSDILSRKIKE 689
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 83/278 (29%), Positives = 143/278 (51%), Gaps = 3/278 (1%)
Query: 171 VMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPD 230
V+S+ A+ G+++EA + +I G+ + G A M PD
Sbjct: 48 VVSLAAE-GRMDEAVEALAAVRGPDAFLHNVMIRGFADAGLPAGALAAYRGMLEDGARPD 106
Query: 231 LVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFD 290
F ++ CA++G L + H +++K G ++ N LV+ Y K G +E A RVFD
Sbjct: 107 RFTFPVVVKCCARLGGLDEGRAAHGMVIKLGLEHDVYTCNSLVAFYAKLGLVEDAERVFD 166
Query: 291 AVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKT-SVRPNEATLATTLSACAELGSLS 349
+ + + W M+ GY G S A+ F+ + V+ + + L+AC S
Sbjct: 167 GMPVRDIVTWNIMVDGYVSNGLGSLALACFQEMHDALEVQHDSVGIIAALAACCLEFSSM 226
Query: 350 KGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYA 409
+GKEI Y++ +GLE + +V TSL+ M+ KCG + A+ VF +P + + W+ MI GYA
Sbjct: 227 QGKEIHGYVIRHGLEQDIKVGTSLLDMYCKCGEVAYARSVFATMPLRTVVTWNCMIGGYA 286
Query: 410 IHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHS 447
++ D+A + F +M+ EGL+ + V ++L+AC+ +
Sbjct: 287 LNERPDEAFDCFMQMR-AEGLQVEVVTAINLLAACAQT 323
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 112/238 (47%), Gaps = 18/238 (7%)
Query: 270 NLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVR 329
+L+VS+ + G ++ A AV FL MI G+A G P+ A+ ++ +L+ R
Sbjct: 46 SLVVSLAAE-GRMDEAVEALAAVRGPDAFLHNVMIRGFADAGLPAGALAAYRGMLEDGAR 104
Query: 330 PNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEV 389
P+ T + CA LG L +G+ ++ GLE + SL+ ++K G + A+ V
Sbjct: 105 PDRFTFPVVVKCCARLGGLDEGRAAHGMVIKLGLEHDVYTCNSLVAFYAKLGLVEDAERV 164
Query: 390 FERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGM 449
F+ +P +D+ W+ M++GY +G+G AL F +M ++ D+V + L+AC
Sbjct: 165 FDGMPVRDIVTWNIMVDGYVSNGLGSLALACFQEMHDALEVQHDSVGIIAALAACCLE-- 222
Query: 450 VDDGLSFFKSMQSN--------FGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVE 499
F SMQ G+E I+ L+D+ + G A MP+
Sbjct: 223 -------FSSMQGKEIHGYVIRHGLEQDIKVGTSLLDMYCKCGEVAYARSVFATMPLR 273
Score = 39.7 bits (91), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 61/139 (43%), Gaps = 6/139 (4%)
Query: 363 LESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFY 422
L R SL+ + GR+++A E V D + + MI G+A G+ AL +
Sbjct: 37 LPPKRGSSKSLVVSLAAEGRMDEAVEALAAVRGPDAFLHNVMIRGFADAGLPAGALAAYR 96
Query: 423 KMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLC--LVDLL 480
M +G +PD + ++ C+ G +D+G + M G+E + Y C LV
Sbjct: 97 GMLE-DGARPDRFTFPVVVKCCARLGGLDEGRA-AHGMVIKLGLEHDV--YTCNSLVAFY 152
Query: 481 GRAGRFDLALKTIHEMPVE 499
+ G + A + MPV
Sbjct: 153 AKLGLVEDAERVFDGMPVR 171
>gi|188509949|gb|ACD56635.1| putative pentatricopeptide repeat protein [Gossypium raimondii]
Length = 667
Score = 360 bits (924), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 186/526 (35%), Positives = 298/526 (56%), Gaps = 26/526 (4%)
Query: 96 RSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCV 155
R V+SWNS+IS + L + + + K+M LG+++ +T +SV+ GC+ +S+ V
Sbjct: 76 RDVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCAKSGTLSLGKAV 135
Query: 156 YKLGL---LNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNV 212
+ L + I +N+++ MY+K G ++ A +F+++GE ++VSWT++I GY G
Sbjct: 136 HSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGWS 195
Query: 213 NEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLL 272
+ A L QM + V D+V +++ CA+ G+L +H + + + + N L
Sbjct: 196 DGAIILLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNMASNLFVCNAL 255
Query: 273 VSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNE 332
+ MY KCG +E A VF ++ K + W +M+G ++P+
Sbjct: 256 MDMYAKCGSMEGANSVFSTMVVKDIISWNTMVG---------------------ELKPDS 294
Query: 333 ATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFER 392
T+A L ACA L +L +GKEI YI+ NG S+R V +L+ ++ KCG + A+ +F+
Sbjct: 295 RTMACILPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDM 354
Query: 393 VPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDD 452
+P KDL W+ MI GY +HG G++A+ F +M+ G++PD V + SIL ACSHSG+++
Sbjct: 355 IPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDA-GIEPDEVSFISILYACSHSGLLEQ 413
Query: 453 GLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSAC 512
G FF M+++F IEP +EHY C+VDLL R G A K I +P+ A +W LL C
Sbjct: 414 GWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYKFIETLPIAPDATIWGALLCGC 473
Query: 513 MKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPG 572
+H++EL E A+ + L P +TG Y+L+AN++ A W+E R + + L K PG
Sbjct: 474 RIYHDIELAEKVAERVFELEPENTGYYVLLANIYAEAEKWEEVKRMREKIGKKGLRKNPG 533
Query: 573 WSQVEIDGSVQVFVAGDRSHHL-SVDIRKTLKELHIKLLEAGYIAE 617
S +EI G V +FV+G+ S H S I LK++ K+ E GY +
Sbjct: 534 CSWIEIKGRVNLFVSGNNSSHPHSKKIESLLKKMRRKMKEEGYFPK 579
Score = 192 bits (487), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 124/418 (29%), Positives = 206/418 (49%), Gaps = 32/418 (7%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI +NG E L Y M+ G+ + T VL CA ++ GK VHS +K
Sbjct: 84 MISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCAKSGTLSLGKAVHSLAIKSS 143
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F++ L+DMYSKC D + +V ++M R+VVSW S+I+ ++R +D AI++
Sbjct: 144 FERRINFSNTLLDMYSKCGDLDGALRVFEKMGE--RNVVSWTSMIAGYTRDGWSDGAIIL 201
Query: 121 LKEMWVLGLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
L++M G++L S++ C S G +H + + +N + + N++M MYA
Sbjct: 202 LQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNMASN-LFVCNALMDMYA 260
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K G + A S+F + I+SW T++G + PD
Sbjct: 261 KCGSMEGANSVFSTMVVKDIISWNTMVG---------------------ELKPDSRTMAC 299
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
++ CA + L +H +L++GY+++ + N LV +Y KCG L LAR +FD + K
Sbjct: 300 ILPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKD 359
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEE 356
+ WT MI GY GY +EA+ F + + P+E + + L AC+ G L +G
Sbjct: 360 LVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWRF-F 418
Query: 357 YIVLN--GLESNRQVQTSLIHMFSKCGRINKAKEVFERVP-DKDLAVWSAMINGYAIH 411
YI+ N +E + ++ + S+ G ++KA + E +P D +W A++ G I+
Sbjct: 419 YIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYKFIETLPIAPDATIWGALLCGCRIY 476
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 79/281 (28%), Positives = 131/281 (46%), Gaps = 57/281 (20%)
Query: 272 LVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPN 331
LVS Y CGDL+ RRVFD + +K+V+LW M+ YA++G E++ LFK +++ +
Sbjct: 2 LVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEGK 61
Query: 332 E---------------------------------------------------ATLATTLS 340
AT+ + L
Sbjct: 62 RSESASELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLV 121
Query: 341 ACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAV 400
CA+ G+LS GK + + + E +L+ M+SKCG ++ A VFE++ ++++
Sbjct: 122 GCAKSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVS 181
Query: 401 WSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSM 460
W++MI GY G D A+ L +M+ EG+K D V TSIL AC+ SG +D+G +
Sbjct: 182 WTSMIAGYTRDGWSDGAIILLQQMEK-EGVKLDVVAITSILHACARSGSLDNGKDVHDYI 240
Query: 461 QSNFGIEPSIEHYLC--LVDLLGRAGRFDLALKTIHEMPVE 499
++N + ++C L+D+ + G + A M V+
Sbjct: 241 KAN---NMASNLFVCNALMDMYAKCGSMEGANSVFSTMVVK 278
>gi|302760843|ref|XP_002963844.1| hypothetical protein SELMODRAFT_80662 [Selaginella moellendorffii]
gi|300169112|gb|EFJ35715.1| hypothetical protein SELMODRAFT_80662 [Selaginella moellendorffii]
Length = 781
Score = 360 bits (924), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 211/632 (33%), Positives = 343/632 (54%), Gaps = 21/632 (3%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI G ++ L + M + V T+ +L ACA+ S+ DG +H +L+ G
Sbjct: 76 MIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACASTESLKDGMEIHGQILQQG 135
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMP-VRLRSVVSWNSIISA---HSRACLNDE 116
F+ D FV T LI+MY+KC S R D + R VVSW ++I+A H + L
Sbjct: 136 FEGDVFVGTALINMYNKCG---SVRGAWDSFKRLEHRDVVSWTAMIAACVQHDQFAL--- 189
Query: 117 AILVLKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKL---GLLNNEIPLANSVMS 173
A + + M + G+ + T +V + +S VY L G++ +++ + NS ++
Sbjct: 190 ARWLYRRMQLDGVVPNKITLYTVFNAYGDPNYLSEGKFVYGLVSSGVMESDVRVMNSAVN 249
Query: 174 MYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVV 233
M+ G + +AR +F+++ + +V+W +I YV N EA L ++++ V + +
Sbjct: 250 MFGNAGLLGDARRLFEDMVDRDVVTWNIVITLYVQNENFGEAVRLFGRLQQDGVKANDIT 309
Query: 234 FLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVL 293
F+ ++ + +L +H L+ ++GY+ + + L+S+Y +C A ++F +
Sbjct: 310 FVLMLNVYTSLTSLAKGKVIHELVKEAGYDRDAVVATALMSLYGRCEAPGQAWKIFVDMG 369
Query: 294 EKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKE 353
K V WT M YAQ G+ EA+ LF+ + RP ATL L CA L +L KG++
Sbjct: 370 SKDVITWTVMCVAYAQNGFRKEALQLFQEMQLEGRRPTSATLVAVLDTCAHLAALQKGRQ 429
Query: 354 IEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGM 413
I +I+ N V+T+LI+M+ KCG++ +A VFE++ +D+ VW++M+ YA HG
Sbjct: 430 IHSHIIENRFRMEMVVETALINMYGKCGKMAEAMSVFEKMAKRDILVWNSMLGAYAQHGY 489
Query: 414 GDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHY 473
D+ L LF +MQ ++G+K DAV + S+LSA SHSG V DG +F +M +F I P+ E Y
Sbjct: 490 YDETLQLFNQMQ-LDGVKADAVSFVSVLSALSHSGSVTDGYQYFVAMLQDFSITPTPELY 548
Query: 474 LCLVDLLGRAGRF----DLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLL 529
C+VDLLGRAGR D+ LK +P + +W LL AC H+ + + AA+ +L
Sbjct: 549 GCVVDLLGRAGRIQEAVDIVLKLSGCLPDGI---LWMTLLGACRTHNKTDQAKAAAEQVL 605
Query: 530 TLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGD 589
+P +G Y++++N++ +AG W R LM R + KEPG S +EI V F+ GD
Sbjct: 606 ERDPSHSGAYVVLSNVYAAAGDWDGVNRMRKLMRSRGVKKEPGRSSIEILNRVHEFLEGD 665
Query: 590 RSHHLSVDIRKTLKELHIKLLEAGYIAEADIV 621
RSH I L L+ ++ AGYI + ++
Sbjct: 666 RSHPRRHPIYAELDVLNSEMRAAGYIPDTKMI 697
Score = 182 bits (463), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 126/488 (25%), Positives = 234/488 (47%), Gaps = 12/488 (2%)
Query: 33 FPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMP 92
F +L+ C++ ++ G+RVH HV GF+Q+ V LI MY++C +++V + +
Sbjct: 7 FVALLQRCSSAKNVDHGRRVHWHVRDRGFEQNNLVCGHLIQMYAQCGSVPEAQQVFEIL- 65
Query: 93 VRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGC----SFRQG 148
+ V +W +I + + D A+ + +M + + T+V++++ C S + G
Sbjct: 66 -ERKDVFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACASTESLKDG 124
Query: 149 ISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVN 208
+ +H + + G ++ + ++++MY K G V A F + +VSWT +I V
Sbjct: 125 MEIHGQILQQG-FEGDVFVGTALINMYNKCGSVRGAWDSFKRLEHRDVVSWTAMIAACVQ 183
Query: 209 VGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPL 268
A L +M+ V P+ + + L ++ L+ ++ +
Sbjct: 184 HDQFALARWLYRRMQLDGVVPNKITLYTVFNAYGDPNYLSEGKFVYGLVSSGVMESDVRV 243
Query: 269 DNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSV 328
N V+M+ G L ARR+F+ ++++ V W +I Y Q EAV LF RL + V
Sbjct: 244 MNSAVNMFGNAGLLGDARRLFEDMVDRDVVTWNIVITLYVQNENFGEAVRLFGRLQQDGV 303
Query: 329 RPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKE 388
+ N+ T L+ L SL+KGK I E + G + + V T+L+ ++ +C +A +
Sbjct: 304 KANDITFVLMLNVYTSLTSLAKGKVIHELVKEAGYDRDAVVATALMSLYGRCEAPGQAWK 363
Query: 389 VFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSG 448
+F + KD+ W+ M YA +G +AL LF +MQ +EG +P + ++L C+H
Sbjct: 364 IFVDMGSKDVITWTVMCVAYAQNGFRKEALQLFQEMQ-LEGRRPTSATLVAVLDTCAHLA 422
Query: 449 MVDDGLSFFKSMQSN-FGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAP 507
+ G + N F +E +E L+++ G+ G+ A+ +M + VW
Sbjct: 423 ALQKGRQIHSHIIENRFRMEMVVE--TALINMYGKCGKMAEAMSVFEKM-AKRDILVWNS 479
Query: 508 LLSACMKH 515
+L A +H
Sbjct: 480 MLGAYAQH 487
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 90/323 (27%), Positives = 157/323 (48%), Gaps = 8/323 (2%)
Query: 229 PDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRV 288
PD F+ L+ C+ N+ +H + G+ + + L+ MY +CG + A++V
Sbjct: 2 PDTAFFVALLQRCSSAKNVDHGRRVHWHVRDRGFEQNNLVCGHLIQMYAQCGSVPEAQQV 61
Query: 289 FDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSL 348
F+ + K VF WT MIG Y Q G A+ +F ++ + V P + T L+ACA SL
Sbjct: 62 FEILERKDVFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACASTESL 121
Query: 349 SKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGY 408
G EI I+ G E + V T+LI+M++KCG + A + F+R+ +D+ W+AMI
Sbjct: 122 KDGMEIHGQILQQGFEGDVFVGTALINMYNKCGSVRGAWDSFKRLEHRDVVSWTAMIAAC 181
Query: 409 AIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEP 468
H A L+ +MQ ++G+ P+ + ++ +A + +G F + S+ +E
Sbjct: 182 VQHDQFALARWLYRRMQ-LDGVVPNKITLYTVFNAYGDPNYLSEG-KFVYGLVSSGVMES 239
Query: 469 SIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNL 528
+ V++ G AG A + +M V+ W +++ +++ N GE
Sbjct: 240 DVRVMNSAVNMFGNAGLLGDARRLFEDM-VDRDVVTWNIVITLYVQNEN--FGEAVRLFG 296
Query: 529 LTLNPGSTGN---YILMANLFTS 548
G N ++LM N++TS
Sbjct: 297 RLQQDGVKANDITFVLMLNVYTS 319
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 105/222 (47%), Gaps = 5/222 (2%)
Query: 329 RPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKE 388
+P+ A L C+ ++ G+ + ++ G E N V LI M+++CG + +A++
Sbjct: 1 KPDTAFFVALLQRCSSAKNVDHGRRVHWHVRDRGFEQNNLVCGHLIQMYAQCGSVPEAQQ 60
Query: 389 VFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSG 448
VFE + KD+ W+ MI Y G D+AL +FY+MQ E + P V Y +IL+AC+ +
Sbjct: 61 VFEILERKDVFAWTRMIGIYCQQGDYDRALGMFYQMQE-EDVMPTKVTYVAILNACASTE 119
Query: 449 MVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPL 508
+ DG+ + G E + L+++ + G A + + W +
Sbjct: 120 SLKDGMEIHGQILQQ-GFEGDVFVGTALINMYNKCGSVRGAWDSFKRLE-HRDVVSWTAM 177
Query: 509 LSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSAG 550
++AC++H L + + + G N I + +F + G
Sbjct: 178 IAACVQHDQFALARWLYRRMQL--DGVVPNKITLYTVFNAYG 217
>gi|15223099|ref|NP_172286.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174869|sp|Q9LN01.1|PPR21_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g08070
gi|8778839|gb|AAF79838.1|AC026875_18 T6D22.15 [Arabidopsis thaliana]
gi|332190118|gb|AEE28239.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 741
Score = 360 bits (924), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 205/629 (32%), Positives = 344/629 (54%), Gaps = 53/629 (8%)
Query: 36 VLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDF------VSSRKVLD 89
+L C + S+ + +H+ ++K+G + + LI+ F +S K +
Sbjct: 39 LLHNCKTLQSL---RIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQ 95
Query: 90 EMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCS----F 145
E +++ WN++ H+ + A+ + M LGL ++ TF V+ C+ F
Sbjct: 96 E-----PNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAF 150
Query: 146 RQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEA--------------------- 184
++G +H V KLG + ++ + S++SMY + G++ +A
Sbjct: 151 KEGQQIHGHVLKLGC-DLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKG 209
Query: 185 ----------RSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVF 234
+ +FDEI +VSW +I GY GN EA L M + +V PD
Sbjct: 210 YASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTM 269
Query: 235 LNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLE 294
+ ++ CAQ G++ L +H + G+ + + N L+ +Y+KCG+LE A +F+ +
Sbjct: 270 VTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPY 329
Query: 295 KSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEI 354
K V W ++IGGY + EA+ LF+ +L++ PN+ T+ + L ACA LG++ G+ I
Sbjct: 330 KDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWI 389
Query: 355 EEYI--VLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHG 412
YI L G+ + ++TSLI M++KCG I A +VF + K L+ W+AMI G+A+HG
Sbjct: 390 HVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHG 449
Query: 413 MGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEH 472
D + +LF +M+ + G++PD + + +LSACSHSGM+D G F++M ++ + P +EH
Sbjct: 450 RADASFDLFSRMRKI-GIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEH 508
Query: 473 YLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLN 532
Y C++DLLG +G F A + I+ M +E +W LL AC H NVELGE A+NL+ +
Sbjct: 509 YGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIE 568
Query: 533 PGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSH 592
P + G+Y+L++N++ SAG W E A R L++D+ + K PG S +EID V F+ GD+ H
Sbjct: 569 PENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFH 628
Query: 593 HLSVDIRKTLKELHIKLLEAGYIAEADIV 621
+ +I L+E+ + L +AG++ + V
Sbjct: 629 PRNREIYGMLEEMEVLLEKAGFVPDTSEV 657
Score = 215 bits (547), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 154/530 (29%), Positives = 253/530 (47%), Gaps = 78/530 (14%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
M R + L Y M+ G+ NS+TFP VLK+CA + +G+++H HVLK+G
Sbjct: 105 MFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLG 164
Query: 61 FQQDAFVQTGLIDMY---------------SKCSDFVS----------------SRKVLD 89
D +V T LI MY S D VS ++K+ D
Sbjct: 165 CDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFD 224
Query: 90 EMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGC----SF 145
E+PV + VVSWN++IS ++ EA+ + K+M + ST V+VVS C S
Sbjct: 225 EIPV--KDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSI 282
Query: 146 RQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGG 205
G +H + G +N + + N+++ +Y+K G++ A +F+ + ++SW T+IGG
Sbjct: 283 ELGRQVHLWIDDHGFGSN-LKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGG 341
Query: 206 YVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLK--SGYN 263
Y ++ EA L +M R TP+ V L+++ CA +G + + +H + K G
Sbjct: 342 YTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVT 401
Query: 264 NEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRL 323
N L L+ MY KCGD+E A +VF+++L KS+ W +MI G+A G + +LF R+
Sbjct: 402 NASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRM 461
Query: 324 LKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRI 383
K ++P++ T LSAC+ G L G+ I + + ++ L H
Sbjct: 462 RKIGIQPDDITFVGLLSACSHSGMLDLGRHI-----FRTMTQDYKMTPKLEH-------- 508
Query: 384 NKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSA 443
+ MI+ G+ +M ++ ++PD V++ S+L A
Sbjct: 509 -----------------YGCMIDLLGHSGL----FKEAEEMINMMEMEPDGVIWCSLLKA 547
Query: 444 CSHSGMVDDGLSFFKSMQSNFGIEP-SIEHYLCLVDLLGRAGRFDLALKT 492
C G V+ G SF +++ IEP + Y+ L ++ AGR++ KT
Sbjct: 548 CKMHGNVELGESFAENL---IKIEPENPGSYVLLSNIYASAGRWNEVAKT 594
>gi|395146511|gb|AFN53666.1| hypothetical protein [Linum usitatissimum]
Length = 850
Score = 360 bits (923), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 209/608 (34%), Positives = 334/608 (54%), Gaps = 44/608 (7%)
Query: 50 KRVHSHVLKVGFQQDAFVQTGLIDM--YSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISA 107
K++H+ +L+ D + + L +S S +RKV D++P ++ SWN +I A
Sbjct: 156 KQIHAQMLRTNKLHDPYAASELFTAAAFSSFSALDYARKVFDQIP--QPNLYSWNILIRA 213
Query: 108 HSRACLNDEAILVLKEMWVLG-LELSASTFVSVVSGCSFRQGISMHCCVYKLGL---LNN 163
+ + +++LV M + TF ++ + R+ + V+ + + +
Sbjct: 214 LATSSDPIQSVLVFIRMLHDSPFGPNKFTFPVLIKAVAERRCFLVGKAVHGMAIKTSFGD 273
Query: 164 EIPLANSVMSMYAKFGKVNEARSIFDEI--GETSIVSWTTIIGGYVNVGNVNEAFGLCNQ 221
++ + NS++ YA G ++ A +F+ I IVSW +++ G+V G ++A L +
Sbjct: 274 DVFVLNSLIHFYASCGHLDLAYLVFEMIEGNNKDIVSWNSMVTGFVQGGYPDKALDLFER 333
Query: 222 MRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGD 281
MR V P+ V ++++ CA+ NL L + + ++ + N + M+ KCG+
Sbjct: 334 MRNEGVHPNAVTMVSVMSACAKTMNLTLGRKVCDYIDRNEMMMNLNVCNATIDMFVKCGE 393
Query: 282 LELARRVFDAVLEKSVFLWTSMIGGYAQL------------------------------- 310
+E+AR +FD + ++ V WT++I GYA++
Sbjct: 394 VEIARGLFDNMEKRDVVSWTTIIDGYAKMSEHGIARDIFDSMPRKDIPAWNVLISGYEQS 453
Query: 311 GYPSEAVNLFK--RLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQ 368
G P EA+ +F+ +L K+ RP++ TL +TLSACA+LG++ G+ I YI ++ NR
Sbjct: 454 GRPKEALAIFRELQLTKSGARPDQVTLLSTLSACAQLGAMDIGEWIHGYIKKERIQLNRN 513
Query: 369 VQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVE 428
+ TSLI M+SK G + KA EVF + +KD+ VWSAMI G A+HG G+ A+ LF MQ +
Sbjct: 514 LATSLIDMYSKSGDVEKAIEVFHSIGNKDVFVWSAMIAGLAMHGRGEAAIELFLDMQETQ 573
Query: 429 GLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDL 488
+KP++V +T++L ACSHSG+VD+G F M+ +G+ P +HY C+VD+LGRAG +
Sbjct: 574 -VKPNSVTFTNLLCACSHSGLVDEGKRLFDEMERVYGVVPKTKHYSCMVDVLGRAGHLEE 632
Query: 489 ALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTS 548
ALK I MP+ A VW LL AC H N+EL E A LL + PG+ G Y+L++NL+
Sbjct: 633 ALKFIEGMPLAPSASVWGALLGACCIHGNLELAEKACSRLLEIEPGNHGAYVLLSNLYAK 692
Query: 549 AGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKELHIK 608
G W+ + R M D L KE G S +EIDG+V F+ GD +H LS DI L E+ +
Sbjct: 693 TGDWEGVSELRQQMRDSGLKKETGCSSIEIDGTVHEFIVGDNAHPLSRDIYAKLDEIMAR 752
Query: 609 LLEAGYIA 616
L GY+A
Sbjct: 753 LRSHGYVA 760
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 125/454 (27%), Positives = 210/454 (46%), Gaps = 45/454 (9%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHG-NSFTFPLVLKACANINSIWDGKRVHSHVLKV 59
+IR + +++ + ML G N FTFP+++KA A GK VH +K
Sbjct: 210 LIRALATSSDPIQSVLVFIRMLHDSPFGPNKFTFPVLIKAVAERRCFLVGKAVHGMAIKT 269
Query: 60 GFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAIL 119
F D FV LI Y+ C + V + + + +VSWNS+++ + D+A+
Sbjct: 270 SFGDDVFVLNSLIHFYASCGHLDLAYLVFEMIEGNNKDIVSWNSMVTGFVQGGYPDKALD 329
Query: 120 VLKEMWVLGLELSASTFVSVVSGCSFRQGISM--HCCVYKLGLLNNEIPL----ANSVMS 173
+ + M G+ +A T VSV+S C+ +++ C Y + NE+ + N+ +
Sbjct: 330 LFERMRNEGVHPNAVTMVSVMSACAKTMNLTLGRKVCDY---IDRNEMMMNLNVCNATID 386
Query: 174 MYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNV------------------------ 209
M+ K G+V AR +FD + + +VSWTTII GY +
Sbjct: 387 MFVKCGEVEIARGLFDNMEKRDVVSWTTIIDGYAKMSEHGIARDIFDSMPRKDIPAWNVL 446
Query: 210 -------GNVNEAFGLCN--QMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKS 260
G EA + Q+ + PD V L+ + CAQ+G + + +H + K
Sbjct: 447 ISGYEQSGRPKEALAIFRELQLTKSGARPDQVTLLSTLSACAQLGAMDIGEWIHGYIKKE 506
Query: 261 GYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLF 320
L L+ MY+K GD+E A VF ++ K VF+W++MI G A G A+ LF
Sbjct: 507 RIQLNRNLATSLIDMYSKSGDVEKAIEVFHSIGNKDVFVWSAMIAGLAMHGRGEAAIELF 566
Query: 321 KRLLKTSVRPNEATLATTLSACAELGSLSKGKEI-EEYIVLNGLESNRQVQTSLIHMFSK 379
+ +T V+PN T L AC+ G + +GK + +E + G+ + + ++ + +
Sbjct: 567 LDMQETQVKPNSVTFTNLLCACSHSGLVDEGKRLFDEMERVYGVVPKTKHYSCMVDVLGR 626
Query: 380 CGRINKAKEVFERVP-DKDLAVWSAMINGYAIHG 412
G + +A + E +P +VW A++ IHG
Sbjct: 627 AGHLEEALKFIEGMPLAPSASVWGALLGACCIHG 660
>gi|50080253|gb|AAT69588.1| hypothetical protein [Oryza sativa Japonica Group]
gi|222632650|gb|EEE64782.1| hypothetical protein OsJ_19638 [Oryza sativa Japonica Group]
Length = 870
Score = 360 bits (923), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 217/622 (34%), Positives = 325/622 (52%), Gaps = 17/622 (2%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
M+ G EE L Y ML G+ + +TFP VL+ C I G+ VH+HVL+ G
Sbjct: 168 MVGGYGKVGFLEEALDLYYRMLWAGMRPDVYTFPCVLRTCGGIPDWRMGREVHAHVLRFG 227
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F + V L+ MY+KC D V++RKV D M V +SWN++I+ H N E
Sbjct: 228 FGDEVDVLNALVTMYAKCGDIVAARKVFDGMAVT--DCISWNAMIAGHFE---NHECEAG 282
Query: 121 LKEMWVLGLE------LSASTFVSVVSGCSFRQGIS--MHCCVYKLGLLNNEIPLANSVM 172
L E+++ LE L T V+V SG G + MH K G + + NS++
Sbjct: 283 L-ELFLTMLENEVQPNLMTITSVTVASGMLSEVGFAKEMHGFAVKRGFAID-VAFCNSLI 340
Query: 173 SMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLV 232
MY G++ +A IF + +SWT +I GY G ++A + M +V+PD V
Sbjct: 341 QMYTSLGRMGDAGKIFSRMETKDAMSWTAMISGYEKNGFPDKALEVYALMELHNVSPDDV 400
Query: 233 VFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAV 292
+ + CA +G L + + +H L G+ + N L+ MY K ++ A VF +
Sbjct: 401 TIASALAACACLGRLDVGIKLHELAQNKGFIRYVVVANALLEMYAKSKHIDKAIEVFKFM 460
Query: 293 LEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGK 352
EK V W+SMI G+ EA+ F+ +L V+PN T LSACA G+L GK
Sbjct: 461 AEKDVVSWSSMIAGFCFNHRSFEALYYFRYMLG-HVKPNSVTFIAALSACAATGALRSGK 519
Query: 353 EIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHG 412
EI Y++ G+ S V +L+ ++ KCG+ + A F +KD+ W+ M++G+ HG
Sbjct: 520 EIHAYVLRCGIGSEGYVPNALLDLYVKCGQTSYAWAQFSVHSEKDVVSWNIMLSGFVAHG 579
Query: 413 MGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEH 472
+GD AL+LF +M + G PD V + ++L ACS +GMV G F M F I P+++H
Sbjct: 580 LGDIALSLFNQMVEM-GEHPDEVTFVALLCACSRAGMVIQGWELFHMMTEKFSIVPNLKH 638
Query: 473 YLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLN 532
Y C+VDLL R G+ A I+ MP++ A VW LL+ C H +VELGE AAK +L L
Sbjct: 639 YACMVDLLSRVGKLTEAYNLINRMPIKPDAAVWGALLNGCRIHRHVELGELAAKVILELE 698
Query: 533 PGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSH 592
P ++L+ +L+T AG W + A R M ++ L ++ G S VE+ G F+ D SH
Sbjct: 699 PNDVAYHVLLCDLYTDAGKWAQVARVRKTMREKGLEQDNGCSWVEVKGVTHAFLTDDESH 758
Query: 593 HLSVDIRKTLKELHIKLLEAGY 614
+I L ++ ++ G+
Sbjct: 759 PQIKEINVVLHGIYERMKACGF 780
Score = 171 bits (434), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 112/389 (28%), Positives = 196/389 (50%), Gaps = 11/389 (2%)
Query: 70 GLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGL 129
++ M + + + +V +MP R V SWN ++ + + +EA+ + M G+
Sbjct: 136 AMLSMLVRFGEIWHAWRVFAKMPER--DVFSWNVMVGGYGKVGFLEEALDLYYRMLWAGM 193
Query: 130 ELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEAR 185
TF V+ C +R G +H V + G +E+ + N++++MYAK G + AR
Sbjct: 194 RPDVYTFPCVLRTCGGIPDWRMGREVHAHVLRFGF-GDEVDVLNALVTMYAKCGDIVAAR 252
Query: 186 SIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVG 245
+FD + T +SW +I G+ L M V P+L+ ++ + +
Sbjct: 253 KVFDGMAVTDCISWNAMIAGHFENHECEAGLELFLTMLENEVQPNLMTITSVTVASGMLS 312
Query: 246 NLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIG 305
+ A MH +K G+ + N L+ MYT G + A ++F + K WT+MI
Sbjct: 313 EVGFAKEMHGFAVKRGFAIDVAFCNSLIQMYTSLGRMGDAGKIFSRMETKDAMSWTAMIS 372
Query: 306 GYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLES 365
GY + G+P +A+ ++ + +V P++ T+A+ L+ACA LG L G ++ E G
Sbjct: 373 GYEKNGFPDKALEVYALMELHNVSPDDVTIASALAACACLGRLDVGIKLHELAQNKGFIR 432
Query: 366 NRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLF-YKM 424
V +L+ M++K I+KA EVF+ + +KD+ WS+MI G+ + +AL F Y +
Sbjct: 433 YVVVANALLEMYAKSKHIDKAIEVFKFMAEKDVVSWSSMIAGFCFNHRSFEALYYFRYML 492
Query: 425 QHVEGLKPDAVVYTSILSACSHSGMVDDG 453
HV KP++V + + LSAC+ +G + G
Sbjct: 493 GHV---KPNSVTFIAALSACAATGALRSG 518
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 114/409 (27%), Positives = 199/409 (48%), Gaps = 15/409 (3%)
Query: 135 TFVSVVSGCSFRQGIS--MHCCVYKLGLLNNEIP-----LANSVMSMYAKFGKVNEARSI 187
+V++ C +R+ + M C + E P L N+++SM +FG++ A +
Sbjct: 98 AYVALFRLCEWRRAVDAGMRACARA----DAEHPSFGLRLGNAMLSMLVRFGEIWHAWRV 153
Query: 188 FDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNL 247
F ++ E + SW ++GGY VG + EA L +M + PD+ F ++ C + +
Sbjct: 154 FAKMPERDVFSWNVMVGGYGKVGFLEEALDLYYRMLWAGMRPDVYTFPCVLRTCGGIPDW 213
Query: 248 FLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGY 307
+ +H+ +L+ G+ +E + N LV+MY KCGD+ AR+VFD + W +MI G+
Sbjct: 214 RMGREVHAHVLRFGFGDEVDVLNALVTMYAKCGDIVAARKVFDGMAVTDCISWNAMIAGH 273
Query: 308 AQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNR 367
+ + LF +L+ V+PN T+ + A L + KE+ + V G +
Sbjct: 274 FENHECEAGLELFLTMLENEVQPNLMTITSVTVASGMLSEVGFAKEMHGFAVKRGFAIDV 333
Query: 368 QVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHV 427
SLI M++ GR+ A ++F R+ KD W+AMI+GY +G D+AL + Y + +
Sbjct: 334 AFCNSLIQMYTSLGRMGDAGKIFSRMETKDAMSWTAMISGYEKNGFPDKALEV-YALMEL 392
Query: 428 EGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFD 487
+ PD V S L+AC+ G +D G+ + Q N G + L+++ ++ D
Sbjct: 393 HNVSPDDVTIASALAACACLGRLDVGIKLHELAQ-NKGFIRYVVVANALLEMYAKSKHID 451
Query: 488 LALKTIHEMPVEVQAQVWAPLLSA-CMKHHNVELGEYAAKNLLTLNPGS 535
A++ M E W+ +++ C H + E Y L + P S
Sbjct: 452 KAIEVFKFM-AEKDVVSWSSMIAGFCFNHRSFEALYYFRYMLGHVKPNS 499
>gi|356524187|ref|XP_003530713.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27110-like [Glycine max]
Length = 705
Score = 359 bits (922), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 195/598 (32%), Positives = 328/598 (54%), Gaps = 11/598 (1%)
Query: 6 TNNGSFEETLSTYSSMLQTG-VHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQD 64
T N + E L + +L + +S+T+P VLKAC + GK +H+ ++K G D
Sbjct: 81 TKNYMYVEALELFEKLLHYPYLKPDSYTYPSVLKACGGLYKYVLGKMIHTCLVKTGLMMD 140
Query: 65 AFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEM 124
V + L+ MY+KC+ F + + +EMP + V WN++IS + ++ EA+ M
Sbjct: 141 IVVGSSLVGMYAKCNAFEKAIWLFNEMPEK--DVACWNTVISCYYQSGNFKEALEYFGLM 198
Query: 125 WVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGK 180
G E ++ T + +S C+ +G+ +H + G L + ++++++ MY K G
Sbjct: 199 RRFGFEPNSVTITTAISSCARLLDLNRGMEIHEELINSGFLLDSF-ISSALVDMYGKCGH 257
Query: 181 VNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILG 240
+ A +F+++ + ++V+W ++I GY G+ L +M V P L +LI+
Sbjct: 258 LEMAIEVFEQMPKKTVVAWNSMISGYGLKGDSISCIQLFKRMYNEGVKPTLTTLSSLIMV 317
Query: 241 CAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLW 300
C++ L +H +++ ++ +++ L+ +Y KCG +ELA +F + + V W
Sbjct: 318 CSRSARLLEGKFVHGYTIRNRIQSDVFINSSLMDLYFKCGKVELAENIFKLIPKSKVVSW 377
Query: 301 TSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVL 360
MI GY G EA+ LF + K+ V P+ T + L+AC++L +L KG+EI I+
Sbjct: 378 NVMISGYVAEGKLFEALGLFSEMRKSYVEPDAITFTSVLTACSQLAALEKGEEIHNLIIE 437
Query: 361 NGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNL 420
L++N V +L+ M++KCG +++A VF+ +P +DL W++MI Y HG AL L
Sbjct: 438 KKLDNNEVVMGALLDMYAKCGAVDEAFSVFKCLPKRDLVSWTSMITAYGSHGQAYVALEL 497
Query: 421 FYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLL 480
F +M +KPD V + +ILSAC H+G+VD+G +F M + +GI P +EHY CL+DLL
Sbjct: 498 FAEMLQ-SNMKPDRVTFLAILSACGHAGLVDEGCYYFNQMVNVYGIIPRVEHYSCLIDLL 556
Query: 481 GRAGRFDLALKTIHEMP-VEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNY 539
GRAGR A + + + P + ++ + L SAC H N++LG A+ L+ +P + Y
Sbjct: 557 GRAGRLHEAYEILQQNPEIRDDVELLSTLFSACRLHRNIDLGAEIARTLIDKDPDDSSTY 616
Query: 540 ILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSH-HLSV 596
IL++N++ SA W E R M + L K PG S +EI+ + F D SH HL +
Sbjct: 617 ILLSNMYASAHKWDEVRVVRSKMKELGLKKNPGCSWIEINQKILPFFVEDNSHLHLEL 674
Score = 236 bits (603), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 146/491 (29%), Positives = 252/491 (51%), Gaps = 22/491 (4%)
Query: 36 VLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEM--PV 93
+L+AC N S+ GK +H V+ +G Q D F+ LI++Y C + ++ V D M P
Sbjct: 9 LLRACMNSKSLKQGKLIHQKVVTLGLQNDIFLCKNLINLYLSCHLYDHAKCVFDNMENPC 68
Query: 94 RLRSVVSWNSIISAHSRACLNDEAI-LVLKEMWVLGLELSASTFVSVVSGC----SFRQG 148
+ WN +++ +++ + EA+ L K + L+ + T+ SV+ C + G
Sbjct: 69 E---ISLWNGLMAGYTKNYMYVEALELFEKLLHYPYLKPDSYTYPSVLKACGGLYKYVLG 125
Query: 149 ISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVN 208
+H C+ K GL+ +I + +S++ MYAK +A +F+E+ E + W T+I Y
Sbjct: 126 KMIHTCLVKTGLMM-DIVVGSSLVGMYAKCNAFEKAIWLFNEMPEKDVACWNTVISCYYQ 184
Query: 209 VGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPL 268
GN EA MRR P+ V I CA++ +L + +H L+ SG+ + +
Sbjct: 185 SGNFKEALEYFGLMRRFGFEPNSVTITTAISSCARLLDLNRGMEIHEELINSGFLLDSFI 244
Query: 269 DNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSV 328
+ LV MY KCG LE+A VF+ + +K+V W SMI GY G + LFKR+ V
Sbjct: 245 SSALVDMYGKCGHLEMAIEVFEQMPKKTVVAWNSMISGYGLKGDSISCIQLFKRMYNEGV 304
Query: 329 RPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKE 388
+P TL++ + C+ L +GK + Y + N ++S+ + +SL+ ++ KCG++ A+
Sbjct: 305 KPTLTTLSSLIMVCSRSARLLEGKFVHGYTIRNRIQSDVFINSSLMDLYFKCGKVELAEN 364
Query: 389 VFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSG 448
+F+ +P + W+ MI+GY G +AL LF +M+ ++PDA+ +TS+L+ACS
Sbjct: 365 IFKLIPKSKVVSWNVMISGYVAEGKLFEALGLFSEMRK-SYVEPDAITFTSVLTACSQLA 423
Query: 449 MVDDGLSFFKSMQSNFGIEPSIEH----YLCLVDLLGRAGRFDLALKTIHEMPVEVQAQV 504
++ G N IE +++ L+D+ + G D A +P +
Sbjct: 424 ALEKGEEI-----HNLIIEKKLDNNEVVMGALLDMYAKCGAVDEAFSVFKCLP-KRDLVS 477
Query: 505 WAPLLSACMKH 515
W +++A H
Sbjct: 478 WTSMITAYGSH 488
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 73/249 (29%), Positives = 120/249 (48%), Gaps = 7/249 (2%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI G + + M GV T ++ C+ + +GK VH + ++
Sbjct: 279 MISGYGLKGDSISCIQLFKRMYNEGVKPTLTTLSSLIMVCSRSARLLEGKFVHGYTIRNR 338
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
Q D F+ + L+D+Y KC + + +P VVSWN +IS + EA+ +
Sbjct: 339 IQSDVFINSSLMDLYFKCGKVELAENIFKLIPK--SKVVSWNVMISGYVAEGKLFEALGL 396
Query: 121 LKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
EM +E A TF SV++ CS +G +H + + L NNE+ + +++ MYA
Sbjct: 397 FSEMRKSYVEPDAITFTSVLTACSQLAALEKGEEIHNLIIEKKLDNNEVVMG-ALLDMYA 455
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K G V+EA S+F + + +VSWT++I Y + G A L +M + ++ PD V FL
Sbjct: 456 KCGAVDEAFSVFKCLPKRDLVSWTSMITAYGSHGQAYVALELFAEMLQSNMKPDRVTFLA 515
Query: 237 LILGCAQVG 245
++ C G
Sbjct: 516 ILSACGHAG 524
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 74/298 (24%), Positives = 128/298 (42%), Gaps = 71/298 (23%)
Query: 335 LATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVP 394
L L AC SL +GK I + +V GL+++ + +LI+++ C + AK VF+ +
Sbjct: 6 LLPLLRACMNSKSLKQGKLIHQKVVTLGLQNDIFLCKNLINLYLSCHLYDHAKCVFDNME 65
Query: 395 DK-DLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACS-------- 445
+ ++++W+ ++ GY + M +AL LF K+ H LKPD+ Y S+L AC
Sbjct: 66 NPCEISLWNGLMAGYTKNYMYVEALELFEKLLHYPYLKPDSYTYPSVLKACGGLYKYVLG 125
Query: 446 ---HSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQA 502
H+ +V GL + S+ LV + + F+ A+ +EMP E
Sbjct: 126 KMIHTCLVKTGLMMDIVVGSS------------LVGMYAKCNAFEKAIWLFNEMP-EKDV 172
Query: 503 QVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLM 562
W ++S + +G +KEA GLM
Sbjct: 173 ACWNTVISC----------------------------------YYQSGNFKEALEYFGLM 198
Query: 563 DDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKELHIKLLEAGYIAEADI 620
RR EP SV + A L +D+ + + E+H +L+ +G++ ++ I
Sbjct: 199 --RRFGFEP--------NSVTITTAISSCARL-LDLNRGM-EIHEELINSGFLLDSFI 244
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 93/198 (46%), Gaps = 8/198 (4%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI G E L +S M ++ V ++ TF VL AC+ + ++ G+ +H+ +++
Sbjct: 380 MISGYVAEGKLFEALGLFSEMRKSYVEPDAITFTSVLTACSQLAALEKGEEIHNLIIEKK 439
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+ V L+DMY+KC + V +P R +VSW S+I+A+ A+ +
Sbjct: 440 LDNNEVVMGALLDMYAKCGAVDEAFSVFKCLPK--RDLVSWTSMITAYGSHGQAYVALEL 497
Query: 121 LKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGLLN-----NEIPLANSVMSMY 175
EM ++ TF++++S C G+ C Y ++N + + ++ +
Sbjct: 498 FAEMLQSNMKPDRVTFLAILSACG-HAGLVDEGCYYFNQMVNVYGIIPRVEHYSCLIDLL 556
Query: 176 AKFGKVNEARSIFDEIGE 193
+ G+++EA I + E
Sbjct: 557 GRAGRLHEAYEILQQNPE 574
>gi|359476188|ref|XP_002283446.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g25970-like [Vitis vinifera]
Length = 829
Score = 359 bits (922), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 200/628 (31%), Positives = 347/628 (55%), Gaps = 11/628 (1%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI N G+FE L SM + G + ++F +LK A + + G++VHS ++K+G
Sbjct: 71 MIAGFVNLGNFETALEFLKSMKRYGFAVDGYSFGSILKGVACVGYVEVGQQVHSMMVKMG 130
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
++ + F + L+DMY+KC + +V + +R+ V+WN++IS +++ A +
Sbjct: 131 YEGNVFAGSALLDMYAKCERVEDAFEVFK--SINIRNSVTWNALISGYAQVGDRGTAFWL 188
Query: 121 LKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
L M + G+E+ TF +++ + +H + K GL ++ + N++++ Y+
Sbjct: 189 LDCMELEGVEIDDGTFAPLLTLLDDPDLHKLTTQVHAKIVKHGLASD-TTVCNAIITAYS 247
Query: 177 KFGKVNEARSIFDEIGET-SIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFL 235
+ G + +A +FD ET +V+W +++ Y+ EAF L +M+ + PD+ +
Sbjct: 248 ECGSIEDAERVFDGAIETRDLVTWNSMLAAYLVNNQEEEAFQLFLEMQVLGFEPDIYTYT 307
Query: 236 NLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKC--GDLELARRVFDAVL 293
++I + + S+H L++K G P+ N L++MY K ++ A +F+++
Sbjct: 308 SVISAAFEGSHQGQGKSLHGLVIKRGLEFLVPISNSLIAMYLKSHSKSMDEALNIFESLE 367
Query: 294 EKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKE 353
K W S++ G++Q G +A+ F+ + V + + L +C++L +L G++
Sbjct: 368 NKDHVSWNSILTGFSQSGLSEDALKFFENMRSQYVVIDHYAFSAVLRSCSDLATLQLGQQ 427
Query: 354 IEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGM 413
+ ++ +G E N V +SLI M+SKCG I A++ F+ P W+++I GYA HG
Sbjct: 428 VHVLVLKSGFEPNGFVASSLIFMYSKCGVIEDARKSFDATPKDSSIAWNSLIFGYAQHGR 487
Query: 414 GDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHY 473
G AL+LF+ M+ +K D + + ++L+ACSH G+V++G SF KSM+S++GI P +EHY
Sbjct: 488 GKIALDLFFLMKD-RRVKLDHITFVAVLTACSHIGLVEEGWSFLKSMESDYGIPPRMEHY 546
Query: 474 LCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNP 533
C++DLLGRAGR D A I MP E A VW LL AC ++EL A +LL L P
Sbjct: 547 ACMIDLLGRAGRLDEAKALIEAMPFEPDAMVWKTLLGACRTCGDIELASQVASHLLELEP 606
Query: 534 GSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHH 593
Y+L++++F W E A+ + LM +R + K PGWS +E+ V+ F A DRSH
Sbjct: 607 EEHCTYVLLSSMFGHLRRWNEKASIKRLMKERGVKKVPGWSWIEVKNEVRSFNAEDRSHP 666
Query: 594 LSVDIRKTLKELHIKLLEAGYIAEADIV 621
+I L EL ++ Y+A ++I+
Sbjct: 667 NCEEIYLRLGELMEEIRRLDYVANSEIM 694
Score = 158 bits (400), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 126/451 (27%), Positives = 213/451 (47%), Gaps = 46/451 (10%)
Query: 131 LSASTFVSVVSGCSFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDE 190
LS S+F ++ +R ++ HC K G I AN+++S YAK G++ A +F E
Sbjct: 7 LSQSSFTAL-----YRASVN-HCLAIKSGT-TASIYTANNIISGYAKCGEIRIASKMFGE 59
Query: 191 IGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLA 250
+ VSW T+I G+VN+GN A M+R D F +++ G A VG + +
Sbjct: 60 TSQRDAVSWNTMIAGFVNLGNFETALEFLKSMKRYGFAVDGYSFGSILKGVACVGYVEVG 119
Query: 251 LSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQL 310
+HS+++K GY + L+ MY KC +E A VF ++ ++ W ++I GYAQ+
Sbjct: 120 QQVHSMMVKMGYEGNVFAGSALLDMYAKCERVEDAFEVFKSINIRNSVTWNALISGYAQV 179
Query: 311 GYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQ 370
G A L + V ++ T A L+ + ++ IV +GL S+ V
Sbjct: 180 GDRGTAFWLLDCMELEGVEIDDGTFAPLLTLLDDPDLHKLTTQVHAKIVKHGLASDTTVC 239
Query: 371 TSLIHMFSKCGRINKAKEVFE-RVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEG 429
++I +S+CG I A+ VF+ + +DL W++M+ Y ++ ++A LF +MQ V G
Sbjct: 240 NAIITAYSECGSIEDAERVFDGAIETRDLVTWNSMLAAYLVNNQEEEAFQLFLEMQ-VLG 298
Query: 430 LKPDAVVYTSILSAC---SHSG--------MVDDGLSFF----------------KSMQS 462
+PD YTS++SA SH G ++ GL F KSM
Sbjct: 299 FEPDIYTYTSVISAAFEGSHQGQGKSLHGLVIKRGLEFLVPISNSLIAMYLKSHSKSMDE 358
Query: 463 NFGIEPSIEH-----YLCLVDLLGRAGRFDLALKTIHEMP---VEVQAQVWAPLLSACMK 514
I S+E+ + ++ ++G + ALK M V + ++ +L +C
Sbjct: 359 ALNIFESLENKDHVSWNSILTGFSQSGLSEDALKFFENMRSQYVVIDHYAFSAVLRSCSD 418
Query: 515 HHNVELGEYAAKNLLTLNPGSTGNYILMANL 545
++LG+ ++L L G N + ++L
Sbjct: 419 LATLQLGQQV--HVLVLKSGFEPNGFVASSL 447
Score = 151 bits (382), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 119/489 (24%), Positives = 221/489 (45%), Gaps = 13/489 (2%)
Query: 34 PLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPV 93
PL + ++ +++ H +K G + +I Y+KC + + K+ E
Sbjct: 3 PLHSLSQSSFTALYRASVNHCLAIKSGTTASIYTANNIISGYAKCGEIRIASKMFGE--T 60
Query: 94 RLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCS----FRQGI 149
R VSWN++I+ + A+ LK M G + +F S++ G + G
Sbjct: 61 SQRDAVSWNTMIAGFVNLGNFETALEFLKSMKRYGFAVDGYSFGSILKGVACVGYVEVGQ 120
Query: 150 SMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNV 209
+H + K+G N + ++++ MYAK +V +A +F I + V+W +I GY V
Sbjct: 121 QVHSMMVKMGYEGN-VFAGSALLDMYAKCERVEDAFEVFKSINIRNSVTWNALISGYAQV 179
Query: 210 GNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLD 269
G+ AF L + M V D F L+ L +H+ ++K G ++ +
Sbjct: 180 GDRGTAFWLLDCMELEGVEIDDGTFAPLLTLLDDPDLHKLTTQVHAKIVKHGLASDTTVC 239
Query: 270 NLLVSMYTKCGDLELARRVFDAVLE-KSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSV 328
N +++ Y++CG +E A RVFD +E + + W SM+ Y EA LF +
Sbjct: 240 NAIITAYSECGSIEDAERVFDGAIETRDLVTWNSMLAAYLVNNQEEEAFQLFLEMQVLGF 299
Query: 329 RPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMF--SKCGRINKA 386
P+ T + +SA E +GK + ++ GLE + SLI M+ S +++A
Sbjct: 300 EPDIYTYTSVISAAFEGSHQGQGKSLHGLVIKRGLEFLVPISNSLIAMYLKSHSKSMDEA 359
Query: 387 KEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSH 446
+FE + +KD W++++ G++ G+ + AL F M+ + + D ++++L +CS
Sbjct: 360 LNIFESLENKDHVSWNSILTGFSQSGLSEDALKFFENMRS-QYVVIDHYAFSAVLRSCSD 418
Query: 447 SGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWA 506
+ G + + G EP+ L+ + + G + A K+ P + + W
Sbjct: 419 LATLQLGQQVHVLVLKS-GFEPNGFVASSLIFMYSKCGVIEDARKSFDATPKD-SSIAWN 476
Query: 507 PLLSACMKH 515
L+ +H
Sbjct: 477 SLIFGYAQH 485
>gi|297604953|ref|NP_001056393.2| Os05g0574800 [Oryza sativa Japonica Group]
gi|255676596|dbj|BAF18307.2| Os05g0574800 [Oryza sativa Japonica Group]
Length = 857
Score = 359 bits (922), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 217/622 (34%), Positives = 325/622 (52%), Gaps = 17/622 (2%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
M+ G EE L Y ML G+ + +TFP VL+ C I G+ VH+HVL+ G
Sbjct: 168 MVGGYGKVGFLEEALDLYYRMLWAGMRPDVYTFPCVLRTCGGIPDWRMGREVHAHVLRFG 227
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F + V L+ MY+KC D V++RKV D M V +SWN++I+ H N E
Sbjct: 228 FGDEVDVLNALVTMYAKCGDIVAARKVFDGMAVT--DCISWNAMIAGHFE---NHECEAG 282
Query: 121 LKEMWVLGLE------LSASTFVSVVSGCSFRQGIS--MHCCVYKLGLLNNEIPLANSVM 172
L E+++ LE L T V+V SG G + MH K G ++ NS++
Sbjct: 283 L-ELFLTMLENEVQPNLMTITSVTVASGMLSEVGFAKEMHGFAVKRGF-AIDVAFCNSLI 340
Query: 173 SMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLV 232
MY G++ +A IF + +SWT +I GY G ++A + M +V+PD V
Sbjct: 341 QMYTSLGRMGDAGKIFSRMETKDAMSWTAMISGYEKNGFPDKALEVYALMELHNVSPDDV 400
Query: 233 VFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAV 292
+ + CA +G L + + +H L G+ + N L+ MY K ++ A VF +
Sbjct: 401 TIASALAACACLGRLDVGIKLHELAQNKGFIRYVVVANALLEMYAKSKHIDKAIEVFKFM 460
Query: 293 LEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGK 352
EK V W+SMI G+ EA+ F+ +L V+PN T LSACA G+L GK
Sbjct: 461 AEKDVVSWSSMIAGFCFNHRSFEALYYFRYML-GHVKPNSVTFIAALSACAATGALRSGK 519
Query: 353 EIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHG 412
EI Y++ G+ S V +L+ ++ KCG+ + A F +KD+ W+ M++G+ HG
Sbjct: 520 EIHAYVLRCGIGSEGYVPNALLDLYVKCGQTSYAWAQFSVHSEKDVVSWNIMLSGFVAHG 579
Query: 413 MGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEH 472
+GD AL+LF +M + G PD V + ++L ACS +GMV G F M F I P+++H
Sbjct: 580 LGDIALSLFNQMVEM-GEHPDEVTFVALLCACSRAGMVIQGWELFHMMTEKFSIVPNLKH 638
Query: 473 YLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLN 532
Y C+VDLL R G+ A I+ MP++ A VW LL+ C H +VELGE AAK +L L
Sbjct: 639 YACMVDLLSRVGKLTEAYNLINRMPIKPDAAVWGALLNGCRIHRHVELGELAAKVILELE 698
Query: 533 PGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSH 592
P ++L+ +L+T AG W + A R M ++ L ++ G S VE+ G F+ D SH
Sbjct: 699 PNDVAYHVLLCDLYTDAGKWAQVARVRKTMREKGLEQDNGCSWVEVKGVTHAFLTDDESH 758
Query: 593 HLSVDIRKTLKELHIKLLEAGY 614
+I L ++ ++ G+
Sbjct: 759 PQIKEINVVLHGIYERMKACGF 780
Score = 172 bits (436), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 112/389 (28%), Positives = 196/389 (50%), Gaps = 11/389 (2%)
Query: 70 GLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGL 129
++ M + + + +V +MP R V SWN ++ + + +EA+ + M G+
Sbjct: 136 AMLSMLVRFGEIWHAWRVFAKMPER--DVFSWNVMVGGYGKVGFLEEALDLYYRMLWAGM 193
Query: 130 ELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEAR 185
TF V+ C +R G +H V + G +E+ + N++++MYAK G + AR
Sbjct: 194 RPDVYTFPCVLRTCGGIPDWRMGREVHAHVLRFGF-GDEVDVLNALVTMYAKCGDIVAAR 252
Query: 186 SIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVG 245
+FD + T +SW +I G+ L M V P+L+ ++ + +
Sbjct: 253 KVFDGMAVTDCISWNAMIAGHFENHECEAGLELFLTMLENEVQPNLMTITSVTVASGMLS 312
Query: 246 NLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIG 305
+ A MH +K G+ + N L+ MYT G + A ++F + K WT+MI
Sbjct: 313 EVGFAKEMHGFAVKRGFAIDVAFCNSLIQMYTSLGRMGDAGKIFSRMETKDAMSWTAMIS 372
Query: 306 GYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLES 365
GY + G+P +A+ ++ + +V P++ T+A+ L+ACA LG L G ++ E G
Sbjct: 373 GYEKNGFPDKALEVYALMELHNVSPDDVTIASALAACACLGRLDVGIKLHELAQNKGFIR 432
Query: 366 NRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLF-YKM 424
V +L+ M++K I+KA EVF+ + +KD+ WS+MI G+ + +AL F Y +
Sbjct: 433 YVVVANALLEMYAKSKHIDKAIEVFKFMAEKDVVSWSSMIAGFCFNHRSFEALYYFRYML 492
Query: 425 QHVEGLKPDAVVYTSILSACSHSGMVDDG 453
HV KP++V + + LSAC+ +G + G
Sbjct: 493 GHV---KPNSVTFIAALSACAATGALRSG 518
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 114/410 (27%), Positives = 199/410 (48%), Gaps = 15/410 (3%)
Query: 135 TFVSVVSGCSFRQGIS--MHCCVYKLGLLNNEIP-----LANSVMSMYAKFGKVNEARSI 187
+V++ C +R+ + M C + E P L N+++SM +FG++ A +
Sbjct: 98 AYVALFRLCEWRRAVDAGMRACARA----DAEHPSFGLRLGNAMLSMLVRFGEIWHAWRV 153
Query: 188 FDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNL 247
F ++ E + SW ++GGY VG + EA L +M + PD+ F ++ C + +
Sbjct: 154 FAKMPERDVFSWNVMVGGYGKVGFLEEALDLYYRMLWAGMRPDVYTFPCVLRTCGGIPDW 213
Query: 248 FLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGY 307
+ +H+ +L+ G+ +E + N LV+MY KCGD+ AR+VFD + W +MI G+
Sbjct: 214 RMGREVHAHVLRFGFGDEVDVLNALVTMYAKCGDIVAARKVFDGMAVTDCISWNAMIAGH 273
Query: 308 AQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNR 367
+ + LF +L+ V+PN T+ + A L + KE+ + V G +
Sbjct: 274 FENHECEAGLELFLTMLENEVQPNLMTITSVTVASGMLSEVGFAKEMHGFAVKRGFAIDV 333
Query: 368 QVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHV 427
SLI M++ GR+ A ++F R+ KD W+AMI+GY +G D+AL + Y + +
Sbjct: 334 AFCNSLIQMYTSLGRMGDAGKIFSRMETKDAMSWTAMISGYEKNGFPDKALEV-YALMEL 392
Query: 428 EGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFD 487
+ PD V S L+AC+ G +D G+ + Q N G + L+++ ++ D
Sbjct: 393 HNVSPDDVTIASALAACACLGRLDVGIKLHELAQ-NKGFIRYVVVANALLEMYAKSKHID 451
Query: 488 LALKTIHEMPVEVQAQVWAPLLSA-CMKHHNVELGEYAAKNLLTLNPGST 536
A++ M E W+ +++ C H + E Y L + P S
Sbjct: 452 KAIEVFKFM-AEKDVVSWSSMIAGFCFNHRSFEALYYFRYMLGHVKPNSV 500
>gi|357465513|ref|XP_003603041.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355492089|gb|AES73292.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 729
Score = 359 bits (922), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 198/605 (32%), Positives = 329/605 (54%), Gaps = 9/605 (1%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+I + NG + + ML+ N T +L +C I+ G+ +H +K G
Sbjct: 128 LICGYSQNGYLYHAIQLFVDMLRENFKPNQTTIVSLLPSCGCFELIFQGRSIHGFGIKAG 187
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F D+ + L+ MY+KC D +S+ + DEM + SVVSWN++I + + L D+AIL
Sbjct: 188 FGLDSHLNNALMSMYAKCDDLEASQLLFDEMDEK--SVVSWNTMIGVYGQNGLFDKAILY 245
Query: 121 LKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGK 180
KEM G S+ T +++VS +F + + HC V K G N+ + S++ +YAK G
Sbjct: 246 FKEMLKEGFHPSSVTIMNLVSANAFPENV--HCYVVKCGF-TNDASVVTSLVCLYAKQGF 302
Query: 181 VNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILG 240
N A+ ++ +++ T II Y G++ A Q ++ + PD V + ++ G
Sbjct: 303 TNTAKQLYKYYPTKDLITLTAIISSYSEKGDIESAVECFIQTIQLDIKPDAVALIGVLHG 362
Query: 241 CAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLW 300
+ + + H +KSG +N+ + N L+S+Y++ ++E A +F + EK + W
Sbjct: 363 ITNPSHFAIGCTFHGYGVKSGLSNDCLVANGLISLYSRFDEIEAALSLFYDMREKPLITW 422
Query: 301 TSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVL 360
SMI G Q G S+A+ LF + +P+ T+A+ LS C +LG+L G+ + YI+
Sbjct: 423 NSMISGCVQAGKSSDAMELFSEMSMCGKKPDAITIASLLSGCCQLGNLRIGETLHSYILR 482
Query: 361 NGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNL 420
N + + T+LI M+SKCGR++ A++VF + D LA W+A+I+GY+++G+ A
Sbjct: 483 NNVRVEDFIGTALIDMYSKCGRLDYAEKVFYNIKDPCLATWNAIISGYSLYGLEHTAFGC 542
Query: 421 FYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLL 480
+ K+Q +GLKPD + + +L+AC+H G+V GL +F M +G+ PS++HY C+V LL
Sbjct: 543 YSKLQE-QGLKPDKITFLGVLAACTHGGLVYLGLEYFNIMTKEYGLMPSLQHYACIVALL 601
Query: 481 GRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYI 540
G+ G F A++ I++M ++ + VW LL+AC V+LGE AK L LN + G Y+
Sbjct: 602 GKEGLFKEAIEFINKMEIQPDSAVWGALLNACCIQREVKLGECLAKKLFLLNHKNGGFYV 661
Query: 541 LMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEI---DGSVQVFVAGDRSHHLSVD 597
LM+NL+ G W + A R +M D G S +++ D S G +L+
Sbjct: 662 LMSNLYAIVGRWDDVARVREMMKDSGGDGCSGVSVIDVISADDSNNNNNLGPSEVYLNTS 721
Query: 598 IRKTL 602
I + L
Sbjct: 722 IWQHL 726
Score = 186 bits (472), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 144/511 (28%), Positives = 239/511 (46%), Gaps = 28/511 (5%)
Query: 15 LSTYSSMLQTGVHGNSFTFPLVLKA---------CANINSIWDGKRVHSHVLKVGFQQDA 65
L + +LQ V+ N FTF L++KA C + ++ +++ + LK G Q
Sbjct: 33 LVIFRQILQANVNPNEFTFSLLIKAYLSSPSFTHCPSTAAL-QARQIQTQCLKRGVNQFI 91
Query: 66 FVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMW 125
V T LID+Y K +R + D+M R VVSWN +I +S+ AI + +M
Sbjct: 92 HVHTSLIDLYMKLGFTSHARNMFDQM--SYRDVVSWNVLICGYSQNGYLYHAIQLFVDML 149
Query: 126 VLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKV 181
+ + +T VS++ C QG S+H K G + L N++MSMYAK +
Sbjct: 150 RENFKPNQTTIVSLLPSCGCFELIFQGRSIHGFGIKAG-FGLDSHLNNALMSMYAKCDDL 208
Query: 182 NEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGC 241
++ +FDE+ E S+VSW T+IG Y G ++A +M + P V +NL+
Sbjct: 209 EASQLLFDEMDEKSVVSWNTMIGVYGQNGLFDKAILYFKEMLKEGFHPSSVTIMNLVSAN 268
Query: 242 AQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWT 301
A N+ H ++K G+ N+ + LV +Y K G A++++ K + T
Sbjct: 269 AFPENV------HCYVVKCGFTNDASVVTSLVCLYAKQGFTNTAKQLYKYYPTKDLITLT 322
Query: 302 SMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLN 361
++I Y++ G AV F + ++ ++P+ L L + G Y V +
Sbjct: 323 AIISSYSEKGDIESAVECFIQTIQLDIKPDAVALIGVLHGITNPSHFAIGCTFHGYGVKS 382
Query: 362 GLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLF 421
GL ++ V LI ++S+ I A +F + +K L W++MI+G G A+ LF
Sbjct: 383 GLSNDCLVANGLISLYSRFDEIEAALSLFYDMREKPLITWNSMISGCVQAGKSSDAMELF 442
Query: 422 YKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKS-MQSNFGIEPSIEHYLCLVDLL 480
+M G KPDA+ S+LS C G + G + +++N +E I L+D+
Sbjct: 443 SEMSMC-GKKPDAITIASLLSGCCQLGNLRIGETLHSYILRNNVRVEDFIG--TALIDMY 499
Query: 481 GRAGRFDLALKTIHEMPVEVQAQVWAPLLSA 511
+ GR D A K + + A W ++S
Sbjct: 500 SKCGRLDYAEKVFYNIKDPCLA-TWNAIISG 529
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 108/359 (30%), Positives = 184/359 (51%), Gaps = 19/359 (5%)
Query: 161 LNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCN 220
+N I + S++ +Y K G + AR++FD++ +VSW +I GY G + A L
Sbjct: 87 VNQFIHVHTSLIDLYMKLGFTSHARNMFDQMSYRDVVSWNVLICGYSQNGYLYHAIQLFV 146
Query: 221 QMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCG 280
M R + P+ ++L+ C +F S+H +K+G+ + L+N L+SMY KC
Sbjct: 147 DMLRENFKPNQTTIVSLLPSCGCFELIFQGRSIHGFGIKAGFGLDSHLNNALMSMYAKCD 206
Query: 281 DLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLS 340
DLE ++ +FD + EKSV W +MIG Y Q G +A+ FK +LK P+ T+ +S
Sbjct: 207 DLEASQLLFDEMDEKSVVSWNTMIGVYGQNGLFDKAILYFKEMLKEGFHPSSVTIMNLVS 266
Query: 341 ACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAV 400
A A + + Y+V G ++ V TSL+ +++K G N AK++++ P KDL
Sbjct: 267 ANA------FPENVHCYVVKCGFTNDASVVTSLVCLYAKQGFTNTAKQLYKYYPTKDLIT 320
Query: 401 WSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSM 460
+A+I+ Y+ G + A+ F + ++ +KPDAV +L ++ G +F
Sbjct: 321 LTAIISSYSEKGDIESAVECFIQTIQLD-IKPDAVALIGVLHGITNPSHFAIGCTF---- 375
Query: 461 QSNFGIEPSIEHYLCLV--DLLGRAGRFD---LALKTIHEMPVEVQAQVWAPLLSACMK 514
+G++ + + CLV L+ RFD AL ++M E W ++S C++
Sbjct: 376 -HGYGVKSGLSND-CLVANGLISLYSRFDEIEAALSLFYDMR-EKPLITWNSMISGCVQ 431
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 87/171 (50%), Gaps = 12/171 (7%)
Query: 314 SEAVNLFKRLLKTSVRPNEATLATTLSA---------CAELGSLSKGKEIEEYIVLNGLE 364
S A+ +F+++L+ +V PNE T + + A C +L + ++I+ + G+
Sbjct: 30 SPALVIFRQILQANVNPNEFTFSLLIKAYLSSPSFTHCPSTAAL-QARQIQTQCLKRGVN 88
Query: 365 SNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKM 424
V TSLI ++ K G + A+ +F+++ +D+ W+ +I GY+ +G A+ LF M
Sbjct: 89 QFIHVHTSLIDLYMKLGFTSHARNMFDQMSYRDVVSWNVLICGYSQNGYLYHAIQLFVDM 148
Query: 425 QHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFK-SMQSNFGIEPSIEHYL 474
E KP+ S+L +C ++ G S +++ FG++ + + L
Sbjct: 149 LR-ENFKPNQTTIVSLLPSCGCFELIFQGRSIHGFGIKAGFGLDSHLNNAL 198
>gi|347954536|gb|AEP33768.1| organelle transcript processing 82, partial [Nasturtium officinale]
Length = 670
Score = 359 bits (922), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 198/557 (35%), Positives = 309/557 (55%), Gaps = 37/557 (6%)
Query: 101 WNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVY 156
WN++ H+ + A+ + M LGL ++ TF ++ C+ ++G+ +H V
Sbjct: 31 WNTMFRGHALSPDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAKLKASKEGLQIHGHVL 90
Query: 157 KLG---------------LLNNEIPLANSV---------------MSMYAKFGKVNEARS 186
KLG + N + A+ V ++ YA G + AR+
Sbjct: 91 KLGYELDLYVHTSLISMYVQNERLEDAHKVFDRSSHRDVVSYTALVTGYASRGYIESARN 150
Query: 187 IFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGN 246
+FDEI +VSW +I GYV GN EA L +M + +V PD + +I A+ G+
Sbjct: 151 MFDEIPVKDVVSWNAMISGYVETGNYKEALELFKEMMKTNVRPDESTMVTVISASARSGS 210
Query: 247 LFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGG 306
+ L +HS + G+ + + N L+ Y+KCG++E A +F + K V W +IGG
Sbjct: 211 IELGRQVHSWIADHGFGSNLKIVNALIDFYSKCGEMETACGLFLGLSYKDVISWNILIGG 270
Query: 307 YAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYI--VLNGLE 364
Y L EA+ LF+ +L++ PN+ T+ + L ACA LG++ G+ I YI L G+
Sbjct: 271 YTHLNLYKEALLLFQEMLRSGESPNDVTMLSILHACAHLGAIDIGRWIHVYIDKRLKGVT 330
Query: 365 SNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKM 424
+ ++TSLI M+SKCG I A +VF + K L W+AMI G+A+HG + A ++F +M
Sbjct: 331 NASSLRTSLIDMYSKCGDIEAAHQVFNSMLHKSLPAWNAMIFGFAMHGRANAAFDIFSRM 390
Query: 425 QHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAG 484
+ E +KPD + + +LSACSH+GM+D G F+SM N+ I P +EHY C++DLLG +G
Sbjct: 391 RKNE-IKPDDITFVGLLSACSHAGMLDLGRHIFRSMTHNYKITPKLEHYGCMIDLLGHSG 449
Query: 485 RFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMAN 544
F A + I M +E +W LL AC H NVELGE A+NL + P + G+Y+L++N
Sbjct: 450 LFKEAEEMISTMTMEPDGVIWCSLLKACKMHGNVELGEKFAQNLFKIEPNNPGSYVLLSN 509
Query: 545 LFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKE 604
++ +AG W E A RGL++D+ + K PG S +EID V F+ GD+ H + +I L+E
Sbjct: 510 IYATAGRWNEVARIRGLLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEE 569
Query: 605 LHIKLLEAGYIAEADIV 621
+ + L EAG++ + V
Sbjct: 570 MEVLLQEAGFVPDTSEV 586
Score = 215 bits (548), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 149/511 (29%), Positives = 245/511 (47%), Gaps = 78/511 (15%)
Query: 15 LSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDM 74
L Y M+ G+ NS+TFP +LK+CA + + +G ++H HVLK+G++ D +V T LI M
Sbjct: 48 LKLYVCMISLGLLPNSYTFPFLLKSCAKLKASKEGLQIHGHVLKLGYELDLYVHTSLISM 107
Query: 75 Y---------------SKCSDFV----------------SSRKVLDEMPVRLRSVVSWNS 103
Y S D V S+R + DE+PV + VVSWN+
Sbjct: 108 YVQNERLEDAHKVFDRSSHRDVVSYTALVTGYASRGYIESARNMFDEIPV--KDVVSWNA 165
Query: 104 IISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGC----SFRQGISMHCCVYKLG 159
+IS + EA+ + KEM + ST V+V+S S G +H + G
Sbjct: 166 MISGYVETGNYKEALELFKEMMKTNVRPDESTMVTVISASARSGSIELGRQVHSWIADHG 225
Query: 160 LLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLC 219
+N + + N+++ Y+K G++ A +F + ++SW +IGGY ++ EA L
Sbjct: 226 FGSN-LKIVNALIDFYSKCGEMETACGLFLGLSYKDVISWNILIGGYTHLNLYKEALLLF 284
Query: 220 NQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLK--SGYNNEDPLDNLLVSMYT 277
+M R +P+ V L+++ CA +G + + +H + K G N L L+ MY+
Sbjct: 285 QEMLRSGESPNDVTMLSILHACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYS 344
Query: 278 KCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLAT 337
KCGD+E A +VF+++L KS+ W +MI G+A G + A ++F R+ K ++P++ T
Sbjct: 345 KCGDIEAAHQVFNSMLHKSLPAWNAMIFGFAMHGRANAAFDIFSRMRKNEIKPDDITFVG 404
Query: 338 TLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKD 397
LSAC+ G L G+ I + N ++ L H
Sbjct: 405 LLSACSHAGMLDLGRHI-----FRSMTHNYKITPKLEH---------------------- 437
Query: 398 LAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFF 457
+ MI+ G+ +A + M ++PD V++ S+L AC G V+ G F
Sbjct: 438 ---YGCMIDLLGHSGLFKEAEEMISTMT----MEPDGVIWCSLLKACKMHGNVELGEKF- 489
Query: 458 KSMQSNFGIEPSIE-HYLCLVDLLGRAGRFD 487
Q+ F IEP+ Y+ L ++ AGR++
Sbjct: 490 --AQNLFKIEPNNPGSYVLLSNIYATAGRWN 518
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 101/351 (28%), Positives = 167/351 (47%), Gaps = 33/351 (9%)
Query: 178 FGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNL 237
F + A S+F+ I E +++ W T+ G+ + A L M + + P+ F L
Sbjct: 10 FEGLPYAISVFETIQEPNLLIWNTMFRGHALSPDPVSALKLYVCMISLGLLPNSYTFPFL 69
Query: 238 ILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSV 297
+ CA++ L +H +LK GY + + L+SMY + LE A +VFD + V
Sbjct: 70 LKSCAKLKASKEGLQIHGHVLKLGYELDLYVHTSLISMYVQNERLEDAHKVFDRSSHRDV 129
Query: 298 FLWTSMIGGYAQLGY-----------P--------------------SEAVNLFKRLLKT 326
+T+++ GYA GY P EA+ LFK ++KT
Sbjct: 130 VSYTALVTGYASRGYIESARNMFDEIPVKDVVSWNAMISGYVETGNYKEALELFKEMMKT 189
Query: 327 SVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKA 386
+VRP+E+T+ T +SA A GS+ G+++ +I +G SN ++ +LI +SKCG + A
Sbjct: 190 NVRPDESTMVTVISASARSGSIELGRQVHSWIADHGFGSNLKIVNALIDFYSKCGEMETA 249
Query: 387 KEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSH 446
+F + KD+ W+ +I GY + +AL LF +M G P+ V SIL AC+H
Sbjct: 250 CGLFLGLSYKDVISWNILIGGYTHLNLYKEALLLFQEMLR-SGESPNDVTMLSILHACAH 308
Query: 447 SGMVDDGLSFFKSMQSNF-GIEPSIEHYLCLVDLLGRAGRFDLALKTIHEM 496
G +D G + G+ + L+D+ + G + A + + M
Sbjct: 309 LGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYSKCGDIEAAHQVFNSM 359
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 71/255 (27%), Positives = 128/255 (50%), Gaps = 7/255 (2%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI G+++E L + M++T V + T V+ A A SI G++VHS + G
Sbjct: 166 MISGYVETGNYKEALELFKEMMKTNVRPDESTMVTVISASARSGSIELGRQVHSWIADHG 225
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F + + LID YSKC + ++ + + + + V+SWN +I ++ L EA+L+
Sbjct: 226 FGSNLKIVNALIDFYSKCGEMETACGLF--LGLSYKDVISWNILIGGYTHLNLYKEALLL 283
Query: 121 LKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVY-----KLGLLNNEIPLANSVMSMY 175
+EM G + T +S++ C+ I + ++ +L + N L S++ MY
Sbjct: 284 FQEMLRSGESPNDVTMLSILHACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMY 343
Query: 176 AKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFL 235
+K G + A +F+ + S+ +W +I G+ G N AF + ++MR+ + PD + F+
Sbjct: 344 SKCGDIEAAHQVFNSMLHKSLPAWNAMIFGFAMHGRANAAFDIFSRMRKNEIKPDDITFV 403
Query: 236 NLILGCAQVGNLFLA 250
L+ C+ G L L
Sbjct: 404 GLLSACSHAGMLDLG 418
>gi|359483391|ref|XP_003632946.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g04370-like [Vitis vinifera]
Length = 732
Score = 359 bits (922), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 204/617 (33%), Positives = 329/617 (53%), Gaps = 11/617 (1%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI T G + S Y+ M + G+ +S T +L + + + +H+ V++ G
Sbjct: 120 MIGCYTRAGEHDVAFSMYNIMRRQGIQPSSVTMLGLLSGVLELVHL---QCLHACVIQYG 176
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F D + ++++Y KC ++ + + M R V+SWNS++S +++ E + +
Sbjct: 177 FGSDVALANSMLNVYCKCGRVEDAQALFELMDAR--DVISWNSLVSGYAQLGNIREVLQL 234
Query: 121 LKEMWVLGLELSASTFVSVVSGCSFRQ----GISMHCCVYKLGLLNNEIPLANSVMSMYA 176
L M G+E TF S+VS + + G +H + + GL + + S++ MY
Sbjct: 235 LIRMKTDGIEPDQQTFGSLVSAAAMQSKLGVGKMVHGHILRAGL-EQDSHIETSLIGMYL 293
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K G VN A IF+ + ++SWT +I G V + A + +M + V P +
Sbjct: 294 KCGNVNSAFRIFEGMMHKDVISWTAMISGLVQNDCADMAVTVFRRMLKSRVMPSTATIAS 353
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
++ CA++G+ L S+H +L+ + P N LV+MY KCG LE + VFD + +
Sbjct: 354 VLAACAELGSFPLGTSVHGYILRQRIKLDIPSQNSLVTMYAKCGHLEQSCSVFDRMSRRD 413
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEE 356
+ W +++ G+AQ G+ +A+ LF + K RP+ T+ + L ACA +G+L +GK I
Sbjct: 414 IVSWNAIVSGHAQNGHLCKALLLFNEMRKARQRPDSITVVSLLQACASIGALHQGKWIHN 473
Query: 357 YIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQ 416
++ + L + T+L+ M+SKCG + A++ F+R+P +DL WS++I GY HG G+
Sbjct: 474 FVTKSCLGPCILIDTALVDMYSKCGDLGSAQKCFDRMPQQDLVSWSSIIAGYGSHGKGET 533
Query: 417 ALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCL 476
AL ++ H G++P+ V+Y SILSACSH+G+VD GLSFF SM +FGIEP +EH C+
Sbjct: 534 ALRMYSDFLHT-GIQPNHVIYLSILSACSHNGLVDQGLSFFHSMTKDFGIEPRLEHRACI 592
Query: 477 VDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGST 536
VDLL RAGR + A M + V LL AC NVELG+ A+ ++ L P +
Sbjct: 593 VDLLSRAGRVEEAYSFYKRMFPKPSMDVLGILLDACRTTGNVELGDIVAREIVILKPANA 652
Query: 537 GNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSV 596
GNY+ +A+ + S W M L K PGWS +E+ G++ F SH
Sbjct: 653 GNYVQLAHSYASMKRWDGVGEVWTQMKSLHLKKLPGWSFIELHGTITTFFTDHSSHPQFE 712
Query: 597 DIRKTLKELHIKLLEAG 613
+I LK L ++ + G
Sbjct: 713 EIMLVLKILGSEMRKVG 729
Score = 286 bits (732), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 159/500 (31%), Positives = 279/500 (55%), Gaps = 6/500 (1%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+I + G+F + L TYSSML T ++ TFP ++KAC +++ G H V+ G
Sbjct: 19 IINRLSTAGAFCDVLLTYSSMLSTDTPPDAHTFPSLVKACTSLDLFSHGLSFHQRVIVDG 78
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+ D+++ T LI+ YSK S+RKV D M R +VV W ++I ++RA +D A +
Sbjct: 79 YSSDSYIATSLINFYSKFGHNQSARKVFDTMDDR--NVVPWTTMIGCYTRAGEHDVAFSM 136
Query: 121 LKEMWVLGLELSASTFVSVVSGC-SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFG 179
M G++ S+ T + ++SG +H CV + G +++ LANS++++Y K G
Sbjct: 137 YNIMRRQGIQPSSVTMLGLLSGVLELVHLQCLHACVIQYGF-GSDVALANSMLNVYCKCG 195
Query: 180 KVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLIL 239
+V +A+++F+ + ++SW +++ GY +GN+ E L +M+ + PD F +L+
Sbjct: 196 RVEDAQALFELMDARDVISWNSLVSGYAQLGNIREVLQLLIRMKTDGIEPDQQTFGSLVS 255
Query: 240 GCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFL 299
A L + +H +L++G + ++ L+ MY KCG++ A R+F+ ++ K V
Sbjct: 256 AAAMQSKLGVGKMVHGHILRAGLEQDSHIETSLIGMYLKCGNVNSAFRIFEGMMHKDVIS 315
Query: 300 WTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIV 359
WT+MI G Q AV +F+R+LK+ V P+ AT+A+ L+ACAELGS G + YI+
Sbjct: 316 WTAMISGLVQNDCADMAVTVFRRMLKSRVMPSTATIASVLAACAELGSFPLGTSVHGYIL 375
Query: 360 LNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALN 419
++ + Q SL+ M++KCG + ++ VF+R+ +D+ W+A+++G+A +G +AL
Sbjct: 376 RQRIKLDIPSQNSLVTMYAKCGHLEQSCSVFDRMSRRDIVSWNAIVSGHAQNGHLCKALL 435
Query: 420 LFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDL 479
LF +M+ +PD++ S+L AC+ G + G + + + + P I LVD+
Sbjct: 436 LFNEMRKARQ-RPDSITVVSLLQACASIGALHQG-KWIHNFVTKSCLGPCILIDTALVDM 493
Query: 480 LGRAGRFDLALKTIHEMPVE 499
+ G A K MP +
Sbjct: 494 YSKCGDLGSAQKCFDRMPQQ 513
Score = 116 bits (290), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 65/248 (26%), Positives = 129/248 (52%), Gaps = 4/248 (1%)
Query: 198 SWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLL 257
S+ II G + + M PD F +L+ C + LS H +
Sbjct: 15 SYNAIINRLSTAGAFCDVLLTYSSMLSTDTPPDAHTFPSLVKACTSLDLFSHGLSFHQRV 74
Query: 258 LKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAV 317
+ GY+++ + L++ Y+K G + AR+VFD + +++V WT+MIG Y + G A
Sbjct: 75 IVDGYSSDSYIATSLINFYSKFGHNQSARKVFDTMDDRNVVPWTTMIGCYTRAGEHDVAF 134
Query: 318 NLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMF 377
+++ + + ++P+ T+ LS EL L + + ++ G S+ + S+++++
Sbjct: 135 SMYNIMRRQGIQPSSVTMLGLLSGVLELVHL---QCLHACVIQYGFGSDVALANSMLNVY 191
Query: 378 SKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVY 437
KCGR+ A+ +FE + +D+ W+++++GYA G + L L +M+ +G++PD +
Sbjct: 192 CKCGRVEDAQALFELMDARDVISWNSLVSGYAQLGNIREVLQLLIRMK-TDGIEPDQQTF 250
Query: 438 TSILSACS 445
S++SA +
Sbjct: 251 GSLVSAAA 258
>gi|356544848|ref|XP_003540859.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Glycine max]
Length = 701
Score = 359 bits (922), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 200/596 (33%), Positives = 325/596 (54%), Gaps = 16/596 (2%)
Query: 36 VLKACANINSIWDGKRVHSHVLKVG-FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVR 94
+L++ N S+ ++H+HV G +++ ++ T L Y+ C ++ + D+ +
Sbjct: 28 LLQSLTNSKSLTQALQLHAHVTTGGTLRRNTYLATKLAACYAVCGHMPYAQHIFDQ--IV 85
Query: 95 LRSVVSWNSIISAHSRACLND--EAILVLKEMWVLGLELSASTFVSVVSGCS---FRQ-G 148
L++ WNS+I + AC N A+ + +M G + T+ V+ C R+ G
Sbjct: 86 LKNSFLWNSMIRGY--ACNNSPSRALFLYLKMLHFGQKPDNFTYPFVLKACGDLLLREMG 143
Query: 149 ISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVN 208
+H V +G L ++ + NS++SMY KFG V AR +FD + + SW T++ G+V
Sbjct: 144 RKVHALVV-VGGLEEDVYVGNSILSMYFKFGDVEAARVVFDRMLVRDLTSWNTMMSGFVK 202
Query: 209 VGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNE--- 265
G AF + MRR D L L+ C V +L + +H ++++G +
Sbjct: 203 NGEARGAFEVFGDMRRDGFVGDRTTLLALLSACGDVMDLKVGKEIHGYVVRNGESGRVCN 262
Query: 266 DPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLK 325
L N ++ MY C + AR++F+ + K V W S+I GY + G +A+ LF R++
Sbjct: 263 GFLMNSIIDMYCNCESVSCARKLFEGLRVKDVVSWNSLISGYEKCGDAFQALELFGRMVV 322
Query: 326 TSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINK 385
P+E T+ + L+AC ++ +L G ++ Y+V G N V T+LI M++ CG +
Sbjct: 323 VGAVPDEVTVISVLAACNQISALRLGATVQSYVVKRGYVVNVVVGTALIGMYANCGSLVC 382
Query: 386 AKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACS 445
A VF+ +P+K+L + M+ G+ IHG G +A+++FY+M +G+ PD ++T++LSACS
Sbjct: 383 ACRVFDEMPEKNLPACTVMVTGFGIHGRGREAISIFYEMLG-KGVTPDEGIFTAVLSACS 441
Query: 446 HSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVW 505
HSG+VD+G F M ++ +EP HY CLVDLLGRAG D A I M ++ VW
Sbjct: 442 HSGLVDEGKEIFYKMTRDYSVEPRPTHYSCLVDLLGRAGYLDEAYAVIENMKLKPNEDVW 501
Query: 506 APLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDR 565
LLSAC H NV+L +A+ L LNP Y+ ++N++ + W++ R L+ R
Sbjct: 502 TALLSACRLHRNVKLAVISAQKLFELNPDGVSGYVCLSNIYAAERRWEDVENVRALVAKR 561
Query: 566 RLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKELHIKLLEAGYIAEADIV 621
RL K P +S VE++ V F GD SH S DI LK+L+ +L +AGY + +V
Sbjct: 562 RLRKPPSYSFVELNKMVHQFFVGDTSHEQSDDIYAKLKDLNEQLKKAGYKPDTSLV 617
Score = 189 bits (480), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 131/445 (29%), Positives = 218/445 (48%), Gaps = 17/445 (3%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MIR N S L Y ML G ++FT+P VLKAC ++ G++VH+ V+ G
Sbjct: 95 MIRGYACNNSPSRALFLYLKMLHFGQKPDNFTYPFVLKACGDLLLREMGRKVHALVVVGG 154
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
++D +V ++ MY K D ++R V D M V R + SWN+++S + A V
Sbjct: 155 LEEDVYVGNSILSMYFKFGDVEAARVVFDRMLV--RDLTSWNTMMSGFVKNGEARGAFEV 212
Query: 121 LKEMWVLGLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIP--LANSVMSM 174
+M G +T ++++S C + G +H V + G L NS++ M
Sbjct: 213 FGDMRRDGFVGDRTTLLALLSACGDVMDLKVGKEIHGYVVRNGESGRVCNGFLMNSIIDM 272
Query: 175 YAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVF 234
Y V+ AR +F+ + +VSW ++I GY G+ +A L +M + PD V
Sbjct: 273 YCNCESVSCARKLFEGLRVKDVVSWNSLISGYEKCGDAFQALELFGRMVVVGAVPDEVTV 332
Query: 235 LNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLE 294
++++ C Q+ L L ++ S ++K GY + L+ MY CG L A RVFD + E
Sbjct: 333 ISVLAACNQISALRLGATVQSYVVKRGYVVNVVVGTALIGMYANCGSLVCACRVFDEMPE 392
Query: 295 KSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEI 354
K++ T M+ G+ G EA+++F +L V P+E LSAC+ G + +GKEI
Sbjct: 393 KNLPACTVMVTGFGIHGRGREAISIFYEMLGKGVTPDEGIFTAVLSACSHSGLVDEGKEI 452
Query: 355 EEYIVLN-GLESNRQVQTSLIHMFSKCGRINKAKEVFERV---PDKDLAVWSAMINGYAI 410
+ + +E + L+ + + G +++A V E + P++D VW+A+++ +
Sbjct: 453 FYKMTRDYSVEPRPTHYSCLVDLLGRAGYLDEAYAVIENMKLKPNED--VWTALLSACRL 510
Query: 411 HGMGDQALNLFYKMQHVEGLKPDAV 435
H A+ Q + L PD V
Sbjct: 511 HRNVKLAV---ISAQKLFELNPDGV 532
>gi|449443608|ref|XP_004139569.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Cucumis sativus]
Length = 878
Score = 359 bits (922), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 211/620 (34%), Positives = 341/620 (55%), Gaps = 14/620 (2%)
Query: 8 NGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFV 67
NG +E + + M GV+ N FTF VL A A+ + I G +VH+ ++K GF+ FV
Sbjct: 183 NGLNDEVIHLINQMQMEGVNPNGFTFATVLGALADESIIEGGVQVHAMIVKNGFEFTTFV 242
Query: 68 QTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVL 127
LI MY K + V D M VR V+WN +I ++ E + M +
Sbjct: 243 CNALICMYLKSEMVGDAEAVFDSMVVR--DSVTWNIMIGGYAAIGFYLEGFQMFHRMRLA 300
Query: 128 GLELSASTFVSVVSGCSFRQGIS----MHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNE 183
G++LS + F + + CS ++ ++ +HC V K G + + ++M Y+K V+E
Sbjct: 301 GVKLSRTVFCTALKLCSQQRELNFTKQLHCGVVKNGYEFAQ-DIRTALMVTYSKCSSVDE 359
Query: 184 ARSIFDEIGET-SIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCA 242
A +F ++V+WT +IGG+V N +A L QM R V P+ + ++ G
Sbjct: 360 AFKLFSMADAAHNVVTWTAMIGGFVQNNNNEKAVDLFCQMSREGVRPNHFTYSTVLAGKP 419
Query: 243 QVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTS 302
L +H+ ++K+ Y + L+ Y K G++ + RVF ++ K + W++
Sbjct: 420 SS----LLSQLHAQIIKAYYEKVPSVATALLDAYVKTGNVVESARVFYSIPAKDIVAWSA 475
Query: 303 MIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAE-LGSLSKGKEIEEYIVLN 361
M+ G AQ +A+ +F +L+K V+PNE T ++ ++AC+ ++ GK+I V +
Sbjct: 476 MLTGLAQTRDSEKAMEVFIQLVKEGVKPNEYTFSSVINACSSSAATVEHGKQIHATAVKS 535
Query: 362 GLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLF 421
G + V ++L+ M+SK G I A++VF R ++D+ W++MI GY HG +AL +F
Sbjct: 536 GKSNALCVSSALLTMYSKKGNIESAEKVFTRQEERDIVSWNSMITGYGQHGDAKKALEVF 595
Query: 422 YKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLG 481
MQ+ +GL D V + +L+AC+H+G+V++G +F M ++ I+ IEHY C+VDL
Sbjct: 596 QIMQN-QGLPLDDVTFIGVLTACTHAGLVEEGEKYFNIMIKDYHIDKKIEHYSCMVDLYS 654
Query: 482 RAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYIL 541
RAG FD A+ I+ MP +W LL+AC H N+ELG+ AA+ L++L P Y+L
Sbjct: 655 RAGMFDKAMDIINGMPFPASPTIWRTLLAACRVHRNLELGKLAAEKLVSLQPNDAVGYVL 714
Query: 542 MANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKT 601
++N+ AG W+E A R LMD+R++ KE G S +EI + F+AGD SH S +
Sbjct: 715 LSNIHAVAGNWEEKAHVRKLMDERKVKKEAGCSWIEIKNRIFSFLAGDVSHPFSDLVYAK 774
Query: 602 LKELHIKLLEAGYIAEADIV 621
L+EL IKL + GY + + V
Sbjct: 775 LEELSIKLKDMGYQPDTNYV 794
Score = 217 bits (553), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 135/448 (30%), Positives = 228/448 (50%), Gaps = 13/448 (2%)
Query: 6 TNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDA 65
+ N E L + + +G+ + T LK C + G++VH LK GF +D
Sbjct: 80 SRNNHDREALHLFKDLHSSGLGVDGLTLSCALKVCGVLFDQVVGRQVHCQSLKSGFLEDV 139
Query: 66 FVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMW 125
V T L+DMY K DF R + DEM + ++VVSW S++S ++R LNDE I ++ +M
Sbjct: 140 SVGTSLVDMYMKTEDFEDGRGIFDEMGI--KNVVSWTSLLSGYARNGLNDEVIHLINQMQ 197
Query: 126 VLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKV 181
+ G+ + TF +V+ + G+ +H + K G + N+++ MY K V
Sbjct: 198 MEGVNPNGFTFATVLGALADESIIEGGVQVHAMIVKNGFEFTTF-VCNALICMYLKSEMV 256
Query: 182 NEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGC 241
+A ++FD + V+W +IGGY +G E F + ++MR V VF + C
Sbjct: 257 GDAEAVFDSMVVRDSVTWNIMIGGYAAIGFYLEGFQMFHRMRLAGVKLSRTVFCTALKLC 316
Query: 242 AQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFD-AVLEKSVFLW 300
+Q L +H ++K+GY + L+ Y+KC ++ A ++F A +V W
Sbjct: 317 SQQRELNFTKQLHCGVVKNGYEFAQDIRTALMVTYSKCSSVDEAFKLFSMADAAHNVVTW 376
Query: 301 TSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVL 360
T+MIGG+ Q +AV+LF ++ + VRPN T +T L+ S ++ I+
Sbjct: 377 TAMIGGFVQNNNNEKAVDLFCQMSREGVRPNHFTYSTVLAGKPS----SLLSQLHAQIIK 432
Query: 361 NGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNL 420
E V T+L+ + K G + ++ VF +P KD+ WSAM+ G A ++A+ +
Sbjct: 433 AYYEKVPSVATALLDAYVKTGNVVESARVFYSIPAKDIVAWSAMLTGLAQTRDSEKAMEV 492
Query: 421 FYKMQHVEGLKPDAVVYTSILSACSHSG 448
F ++ EG+KP+ ++S+++ACS S
Sbjct: 493 FIQLVK-EGVKPNEYTFSSVINACSSSA 519
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 102/365 (27%), Positives = 191/365 (52%), Gaps = 9/365 (2%)
Query: 84 SRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGC 143
+ ++ DE P L+ + +N ++ SR + EA+ + K++ GL + T + C
Sbjct: 57 AHQLFDETP--LKDISHYNRLLFDFSRNNHDREALHLFKDLHSSGLGVDGLTLSCALKVC 114
Query: 144 S--FRQ--GISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSW 199
F Q G +HC K G L ++ + S++ MY K + R IFDE+G ++VSW
Sbjct: 115 GVLFDQVVGRQVHCQSLKSGFLE-DVSVGTSLVDMYMKTEDFEDGRGIFDEMGIKNVVSW 173
Query: 200 TTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLK 259
T+++ GY G +E L NQM+ V P+ F ++ A + + +H++++K
Sbjct: 174 TSLLSGYARNGLNDEVIHLINQMQMEGVNPNGFTFATVLGALADESIIEGGVQVHAMIVK 233
Query: 260 SGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNL 319
+G+ + N L+ MY K + A VFD+++ + W MIGGYA +G+ E +
Sbjct: 234 NGFEFTTFVCNALICMYLKSEMVGDAEAVFDSMVVRDSVTWNIMIGGYAAIGFYLEGFQM 293
Query: 320 FKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSK 379
F R+ V+ + T L C++ L+ K++ +V NG E + ++T+L+ +SK
Sbjct: 294 FHRMRLAGVKLSRTVFCTALKLCSQQRELNFTKQLHCGVVKNGYEFAQDIRTALMVTYSK 353
Query: 380 CGRINKAKEVFERV-PDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYT 438
C +++A ++F ++ W+AMI G+ + ++A++LF +M EG++P+ Y+
Sbjct: 354 CSSVDEAFKLFSMADAAHNVVTWTAMIGGFVQNNNNEKAVDLFCQMSR-EGVRPNHFTYS 412
Query: 439 SILSA 443
++L+
Sbjct: 413 TVLAG 417
>gi|359481513|ref|XP_003632631.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
mitochondrial-like [Vitis vinifera]
Length = 755
Score = 359 bits (921), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 207/621 (33%), Positives = 333/621 (53%), Gaps = 10/621 (1%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+I + NG L Y MLQ+GV + FTF ++KAC+++ I G+++H+HVLK
Sbjct: 135 VIAGYSQNGQGGNALEFYFQMLQSGVMPDQFTFGSIIKACSSLGDIGLGRQLHAHVLKSE 194
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F Q LI MY+K + + + V M R ++SW S+I+ S+ EA+
Sbjct: 195 FGAHIIAQNALISMYTKSNLIIDALDVFSRMATR--DLISWGSMIAGFSQLGYELEALCY 252
Query: 121 LKEMWVLGLELSAS-TFVSVVSGCSF----RQGISMHCCVYKLGLLNNEIPLANSVMSMY 175
KEM G+ L F SV S CS G +H K GL ++ S+ MY
Sbjct: 253 FKEMLHQGVYLPNEFIFGSVFSACSSLLQPEYGRQLHGMSIKFGL-GRDVFAGCSLCDMY 311
Query: 176 AKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFL 235
AK G ++ AR +F +IG +V+W II G+ G+ EA +QMR + PD +
Sbjct: 312 AKCGLLSCARVVFYQIGRPDLVAWNAIIAGFAYGGDAKEAIAFFSQMRHQGLIPDEITVR 371
Query: 236 NLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAV-LE 294
+L+ C L+ + +H + K G + + P+ N L++MY KC +L A F+ +
Sbjct: 372 SLLCACTSPSELYQGMQVHGYINKMGLDLDVPVCNTLLTMYAKCSELRDAIFFFEEMRCN 431
Query: 295 KSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEI 354
+ W +++ + E L K + + RP+ TL L A AE S+ G ++
Sbjct: 432 ADLVSWNAILTACMRHDQAEEVFRLLKLMCISQHRPDYITLTNVLGASAETVSIEIGNQV 491
Query: 355 EEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMG 414
Y + GL + V LI +++KCG + A ++F+ + + D+ WS++I GYA G G
Sbjct: 492 HCYALKTGLNCDTSVTNGLIDLYAKCGSLKTAHKIFDSMINPDVVSWSSLILGYAQFGYG 551
Query: 415 DQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYL 474
++AL LF M+ ++ +KP+ V + +L+ACSH G+V++G + +M+ FGI P+ EH
Sbjct: 552 EEALKLFKTMRRLD-VKPNHVTFVGVLTACSHVGLVEEGWKLYGTMEKEFGIAPTREHCS 610
Query: 475 CLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPG 534
C+VDLL RAG + A IH+M + VW LL+AC H NV++G+ AA+N+L ++P
Sbjct: 611 CMVDLLARAGCLNEAEGFIHQMAFDPDIVVWKTLLAACKTHGNVDVGKRAAENILKIDPS 670
Query: 535 STGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHL 594
++ ++L+ N++ S G W++ A R LM R + K PG S +E+ + VF D H
Sbjct: 671 NSAAHVLLCNIYASKGNWEDVARLRSLMKQRGVRKVPGQSWIEVKDRIHVFFVEDSLHPE 730
Query: 595 SVDIRKTLKELHIKLLEAGYI 615
I L+EL +++L+AGY+
Sbjct: 731 RNKIYTMLEELLLQMLDAGYV 751
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 127/431 (29%), Positives = 216/431 (50%), Gaps = 7/431 (1%)
Query: 94 RLRSVVSWNSIISAHSRACLNDEAILVLKEMWV-LGLELSASTFVSVVSGCSFRQGISMH 152
+LR+ S N I++ + L +EAI + + G L+ ST+ ++S CS+ + +
Sbjct: 23 KLRAEQSSNEYITSLCKQKLFNEAIKAFEFLQKKTGFCLTLSTYAYLISACSYLRSLEHG 82
Query: 153 CCVYKLGLLNNEIP---LANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNV 209
++ L + P L N +++MY K + +A+ +FD + E ++VSWT++I GY
Sbjct: 83 KKIHDHMLKSKSHPDLTLQNHILNMYGKCKSLKDAQKVFDAMPERNVVSWTSVIAGYSQN 142
Query: 210 GNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLD 269
G A QM + V PD F ++I C+ +G++ L +H+ +LKS +
Sbjct: 143 GQGGNALEFYFQMLQSGVMPDQFTFGSIIKACSSLGDIGLGRQLHAHVLKSEFGAHIIAQ 202
Query: 270 NLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVR 329
N L+SMYTK + A VF + + + W SMI G++QLGY EA+ FK +L V
Sbjct: 203 NALISMYTKSNLIIDALDVFSRMATRDLISWGSMIAGFSQLGYELEALCYFKEMLHQGVY 262
Query: 330 -PNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKE 388
PNE + SAC+ L G+++ + GL + SL M++KCG ++ A+
Sbjct: 263 LPNEFIFGSVFSACSSLLQPEYGRQLHGMSIKFGLGRDVFAGCSLCDMYAKCGLLSCARV 322
Query: 389 VFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSG 448
VF ++ DL W+A+I G+A G +A+ F +M+H +GL PD + S+L AC+
Sbjct: 323 VFYQIGRPDLVAWNAIIAGFAYGGDAKEAIAFFSQMRH-QGLIPDEITVRSLLCACTSPS 381
Query: 449 MVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPL 508
+ G+ + + G++ + L+ + + A+ EM W +
Sbjct: 382 ELYQGMQVHGYI-NKMGLDLDVPVCNTLLTMYAKCSELRDAIFFFEEMRCNADLVSWNAI 440
Query: 509 LSACMKHHNVE 519
L+ACM+H E
Sbjct: 441 LTACMRHDQAE 451
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 129/494 (26%), Positives = 234/494 (47%), Gaps = 18/494 (3%)
Query: 11 FEETLSTYSSMLQ-TGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQT 69
F E + + + + TG T+ ++ AC+ + S+ GK++H H+LK D +Q
Sbjct: 43 FNEAIKAFEFLQKKTGFCLTLSTYAYLISACSYLRSLEHGKKIHDHMLKSKSHPDLTLQN 102
Query: 70 GLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGL 129
+++MY KC ++KV D MP R+VVSW S+I+ +S+ A+ +M G+
Sbjct: 103 HILNMYGKCKSLKDAQKVFDAMPE--RNVVSWTSVIAGYSQNGQGGNALEFYFQMLQSGV 160
Query: 130 ELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEAR 185
TF S++ CS G +H V K I N+++SMY K + +A
Sbjct: 161 MPDQFTFGSIIKACSSLGDIGLGRQLHAHVLK-SEFGAHIIAQNALISMYTKSNLIIDAL 219
Query: 186 SIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSV-TPDLVVFLNLILGCAQV 244
+F + ++SW ++I G+ +G EA +M V P+ +F ++ C+ +
Sbjct: 220 DVFSRMATRDLISWGSMIAGFSQLGYELEALCYFKEMLHQGVYLPNEFIFGSVFSACSSL 279
Query: 245 GNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMI 304
+H + +K G + L MY KCG L AR VF + + W ++I
Sbjct: 280 LQPEYGRQLHGMSIKFGLGRDVFAGCSLCDMYAKCGLLSCARVVFYQIGRPDLVAWNAII 339
Query: 305 GGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLE 364
G+A G EA+ F ++ + P+E T+ + L AC L +G ++ YI GL+
Sbjct: 340 AGFAYGGDAKEAIAFFSQMRHQGLIPDEITVRSLLCACTSPSELYQGMQVHGYINKMGLD 399
Query: 365 SNRQVQTSLIHMFSKCGRINKAKEVFERVP-DKDLAVWSAMINGYAIHGMGDQALNLFYK 423
+ V +L+ M++KC + A FE + + DL W+A++ H ++ L K
Sbjct: 400 LDVPVCNTLLTMYAKCSELRDAIFFFEEMRCNADLVSWNAILTACMRHDQAEEVFRLL-K 458
Query: 424 MQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFF-KSMQSNFGIEPSIEHYLCLVDLLGR 482
+ + +PD + T++L A + + ++ G ++++ + S+ + L+DL +
Sbjct: 459 LMCISQHRPDYITLTNVLGASAETVSIEIGNQVHCYALKTGLNCDTSVTN--GLIDLYAK 516
Query: 483 AGRFDLALKTIHEM 496
G +LKT H++
Sbjct: 517 CG----SLKTAHKI 526
>gi|357115175|ref|XP_003559367.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21300-like [Brachypodium distachyon]
Length = 849
Score = 359 bits (921), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 194/617 (31%), Positives = 338/617 (54%), Gaps = 8/617 (1%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
M+ G + + M +G N T L CA + G ++H+ +K G
Sbjct: 219 MMDGYVKAGDVASAVGLFRVMRASGCDPNFATLACFLSVCAAEADLLSGVQLHTLAVKYG 278
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+ + V L+ MY+KC + ++ MP +V+WN +IS + L D+A+ +
Sbjct: 279 LEPEVAVANTLVSMYAKCQCLEEAWRLFGLMP--RDDLVTWNGMISGCVQNGLVDDALRL 336
Query: 121 LKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
+M GL+ + T S++ + F+QG +H + + + ++ L ++++ +Y
Sbjct: 337 FCDMQKSGLQPDSVTLASLLPALTELNGFKQGKEIHGYIVR-NCAHVDVFLVSALVDIYF 395
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K V A+++FD +V +T+I GYV A + + + + P+ V+ +
Sbjct: 396 KCRDVRMAQNVFDATKSIDVVIGSTMISGYVLNRMSEAAVKMFRYLLALGIKPNAVMVAS 455
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
+ CA + + + +H +LK+ Y +++ L+ MY+KCG L+L+ +F + K
Sbjct: 456 TLPACASMAAMRIGQELHGYVLKNAYEGRCYVESALMDMYSKCGRLDLSHYMFSKMSAKD 515
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEE 356
W SMI +AQ G P EA++LF++++ V+ N T+++ LSACA L ++ GKEI
Sbjct: 516 EVTWNSMISSFAQNGEPEEALDLFRQMIMEGVKYNNVTISSILSACAGLPAIYYGKEIHG 575
Query: 357 YIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQ 416
I+ + ++ +++LI M+ KCG + A VFE +P+K+ W+++I+ Y HG+ +
Sbjct: 576 IIIKGPIRADLFAESALIDMYGKCGNLELALRVFEHMPEKNEVSWNSIISAYGAHGLVKE 635
Query: 417 ALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCL 476
+++L MQ EG K D V + +++SAC+H+G V +GL F+ M + IEP +EH C+
Sbjct: 636 SVDLLCCMQE-EGFKADHVTFLALISACAHAGQVQEGLRLFRCMTEEYHIEPQVEHLSCM 694
Query: 477 VDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGST 536
VDL RAG+ D A++ I +MP + A +W LL AC H NVEL E A++ L L+P +
Sbjct: 695 VDLYSRAGKLDKAMQFIADMPFKPDAGIWGALLHACRVHRNVELAEIASQELFKLDPHNC 754
Query: 537 GNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSV 596
G Y+LM+N+ AG W + R LM D+++ K PG+S V+++ + +FVA D++H S
Sbjct: 755 GYYVLMSNINAVAGRWDGVSKMRRLMKDKKVQKIPGYSWVDVNNTSHLFVAADKNHPDSE 814
Query: 597 DIRKTLKELHIKLLEAG 613
+I +LK L I+L + G
Sbjct: 815 EIYMSLKSLIIELKQEG 831
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 142/516 (27%), Positives = 238/516 (46%), Gaps = 21/516 (4%)
Query: 8 NGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGF-----Q 62
+ +F ET S+ T ++ +L+ C + + G R+H+ + G
Sbjct: 19 SAAFSETASS-----ATNASPCAYRLLALLRGCVAPSHLPLGLRIHARAVTSGLLDAAGP 73
Query: 63 QDAFVQTGLIDMYSKCSDFVSSRKVLDEMP-VRLRSVVSWNSIISAHSRACLNDEAILVL 121
A +QT L+ MY F + V +P + + WN +I + A + A+L
Sbjct: 74 GPAALQTRLVGMYVLARRFRDAVAVFSSLPRAAAAAALPWNWLIRGFTMAGHHRLAVLFY 133
Query: 122 KEMWV--LGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMY 175
+MW T VV C+ G +H LGL + ++ + ++++ MY
Sbjct: 134 VKMWAHPSSPRPDGHTLPYVVKSCAALGALHLGRLVHRTTRALGL-DRDMYVGSALIKMY 192
Query: 176 AKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFL 235
A G ++ AR +FD + E V W ++ GYV G+V A GL MR P+
Sbjct: 193 ADAGLLDGAREVFDGMDERDCVLWNVMMDGYVKAGDVASAVGLFRVMRASGCDPNFATLA 252
Query: 236 NLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEK 295
+ CA +L + +H+L +K G E + N LVSMY KC LE A R+F +
Sbjct: 253 CFLSVCAAEADLLSGVQLHTLAVKYGLEPEVAVANTLVSMYAKCQCLEEAWRLFGLMPRD 312
Query: 296 SVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIE 355
+ W MI G Q G +A+ LF + K+ ++P+ TLA+ L A EL +GKEI
Sbjct: 313 DLVTWNGMISGCVQNGLVDDALRLFCDMQKSGLQPDSVTLASLLPALTELNGFKQGKEIH 372
Query: 356 EYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGD 415
YIV N + + ++L+ ++ KC + A+ VF+ D+ + S MI+GY ++ M +
Sbjct: 373 GYIVRNCAHVDVFLVSALVDIYFKCRDVRMAQNVFDATKSIDVVIGSTMISGYVLNRMSE 432
Query: 416 QALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLC 475
A+ +F + + G+KP+AV+ S L AC+ + G + N E
Sbjct: 433 AAVKMFRYLLAL-GIKPNAVMVASTLPACASMAAMRIGQELHGYVLKN-AYEGRCYVESA 490
Query: 476 LVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSA 511
L+D+ + GR DL+ +M + + W ++S+
Sbjct: 491 LMDMYSKCGRLDLSHYMFSKMSAKDEV-TWNSMISS 525
>gi|302761610|ref|XP_002964227.1| hypothetical protein SELMODRAFT_81196 [Selaginella moellendorffii]
gi|300167956|gb|EFJ34560.1| hypothetical protein SELMODRAFT_81196 [Selaginella moellendorffii]
Length = 736
Score = 359 bits (921), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 202/624 (32%), Positives = 335/624 (53%), Gaps = 17/624 (2%)
Query: 8 NGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQ-DAF 66
NG + E L Y M+ G+ + F + + C++ + G+ +H+ +L+ + D
Sbjct: 36 NGHYREALGYYRRMVLEGLRPDGAMFVVAIGVCSSSKDLKQGQLLHAMILETQLLEFDII 95
Query: 67 VQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWV 126
+ T LI MY++C D +RK DEM + ++V+WN++I+ +SR + A+ + ++M
Sbjct: 96 LGTALITMYARCRDLELARKTFDEMGKK--TLVTWNALIAGYSRNGDHRGALKIYQDMVS 153
Query: 127 L---GLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFG 179
G++ A TF S + CS QG + G ++ I + N++++MY+K G
Sbjct: 154 KSPEGMKPDAITFSSALYACSVVGDISQGREIEARTVASGYASDSI-VQNALINMYSKCG 212
Query: 180 KVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLIL 239
+ AR +FD + +++W T+I GY G +A L +M P++V F+ L+
Sbjct: 213 SLESARKVFDRLKNRDVIAWNTMISGYAKQGAATQALELFQRMGPNDPKPNVVTFIGLLT 272
Query: 240 GCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGD-LELARRVFDAVLEKSVF 298
C + +L ++H + + GY ++ + N+L++MYTKC LE AR+VF+ + + V
Sbjct: 273 ACTNLEDLEQGRAIHRKVKEHGYESDLVIGNVLLNMYTKCSSSLEEARQVFERLRTRDVI 332
Query: 299 LWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYI 358
W +I Y Q G +A+++FK++ +V PNE TL+ LSACA LG+ +GK + I
Sbjct: 333 TWNILIVAYVQYGQAKDALDIFKQMQLENVAPNEITLSNVLSACAVLGAKRQGKAVHALI 392
Query: 359 VLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQAL 418
+++ ++ SL++M+++CG ++ VF + DK L WS +I YA HG L
Sbjct: 393 ASGRCKADVVLENSLMNMYNRCGSLDDTVGVFAAIRDKSLVSWSTLIAAYAQHGHSRTGL 452
Query: 419 NLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVD 478
F+++ EGL D V S LSACSH GM+ +G+ F SM + G+ P H+LC+VD
Sbjct: 453 EHFWELLQ-EGLAADDVTMVSTLSACSHGGMLKEGVQSFLSMVGDHGLAPDYRHFLCMVD 511
Query: 479 LLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGN 538
LL RAGR + A IH+MP A W LLS C H++ + A L L +
Sbjct: 512 LLSRAGRLEAAENLIHDMPFLPDAVAWTSLLSGCKLHNDTKRAARVADKLFELESEDEHS 571
Query: 539 YI-LMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVD 597
+ L++N++ AG W + R + R K PG S +EI+ +V FVAGD+SH
Sbjct: 572 TVTLLSNVYAEAGRWDDVRKTR---NRRAARKNPGCSYIEINDTVHEFVAGDKSHPEEEL 628
Query: 598 IRKTLKELHIKLLEAGYIAEADIV 621
I +K L ++ +AGY+ + +V
Sbjct: 629 IAAEIKRLSKQMKDAGYVPDMRMV 652
Score = 218 bits (555), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 122/390 (31%), Positives = 210/390 (53%), Gaps = 15/390 (3%)
Query: 74 MYSKCSDFVSSRKVLD--EMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLEL 131
MY KC + V E P + VSW I++A +R EA+ + M + GL
Sbjct: 1 MYGKCGSVADALAVFHAIEHP----NSVSWTLIVAAFARNGHYREALGYYRRMVLEGLRP 56
Query: 132 SASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSI 187
+ FV + CS +QG +H + + LL +I L ++++MYA+ + AR
Sbjct: 57 DGAMFVVAIGVCSSSKDLKQGQLLHAMILETQLLEFDIILGTALITMYARCRDLELARKT 116
Query: 188 FDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMS---VTPDLVVFLNLILGCAQV 244
FDE+G+ ++V+W +I GY G+ A + M S + PD + F + + C+ V
Sbjct: 117 FDEMGKKTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACSVV 176
Query: 245 GNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMI 304
G++ + + + SGY ++ + N L++MY+KCG LE AR+VFD + + V W +MI
Sbjct: 177 GDISQGREIEARTVASGYASDSIVQNALINMYSKCGSLESARKVFDRLKNRDVIAWNTMI 236
Query: 305 GGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLE 364
GYA+ G ++A+ LF+R+ +PN T L+AC L L +G+ I + +G E
Sbjct: 237 SGYAKQGAATQALELFQRMGPNDPKPNVVTFIGLLTACTNLEDLEQGRAIHRKVKEHGYE 296
Query: 365 SNRQVQTSLIHMFSKC-GRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYK 423
S+ + L++M++KC + +A++VFER+ +D+ W+ +I Y +G AL++F +
Sbjct: 297 SDLVIGNVLLNMYTKCSSSLEEARQVFERLRTRDVITWNILIVAYVQYGQAKDALDIFKQ 356
Query: 424 MQHVEGLKPDAVVYTSILSACSHSGMVDDG 453
MQ +E + P+ + +++LSAC+ G G
Sbjct: 357 MQ-LENVAPNEITLSNVLSACAVLGAKRQG 385
Score = 198 bits (504), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 120/464 (25%), Positives = 240/464 (51%), Gaps = 18/464 (3%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQT---GVHGNSFTFPLVLKACANINSIWDGKRVHSHVL 57
+I + NG L Y M+ G+ ++ TF L AC+ + I G+ + + +
Sbjct: 131 LIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACSVVGDISQGREIEARTV 190
Query: 58 KVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEA 117
G+ D+ VQ LI+MYSKC S+RKV D + + R V++WN++IS +++ +A
Sbjct: 191 ASGYASDSIVQNALINMYSKCGSLESARKVFDRL--KNRDVIAWNTMISGYAKQGAATQA 248
Query: 118 ILVLKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMS 173
+ + + M + + TF+ +++ C+ QG ++H V + G +++ + N +++
Sbjct: 249 LELFQRMGPNDPKPNVVTFIGLLTACTNLEDLEQGRAIHRKVKEHGY-ESDLVIGNVLLN 307
Query: 174 MYAKFGK-VNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLV 232
MY K + EAR +F+ + +++W +I YV G +A + QM+ +V P+ +
Sbjct: 308 MYTKCSSSLEEARQVFERLRTRDVITWNILIVAYVQYGQAKDALDIFKQMQLENVAPNEI 367
Query: 233 VFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAV 292
N++ CA +G ++H+L+ + L+N L++MY +CG L+ VF A+
Sbjct: 368 TLSNVLSACAVLGAKRQGKAVHALIASGRCKADVVLENSLMNMYNRCGSLDDTVGVFAAI 427
Query: 293 LEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGK 352
+KS+ W+++I YAQ G+ + F LL+ + ++ T+ +TLSAC+ G L +G
Sbjct: 428 RDKSLVSWSTLIAAYAQHGHSRTGLEHFWELLQEGLAADDVTMVSTLSACSHGGMLKEG- 486
Query: 353 EIEEYIVL---NGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPD-KDLAVWSAMINGY 408
++ ++ + +GL + + ++ + S+ GR+ A+ + +P D W+++++G
Sbjct: 487 -VQSFLSMVGDHGLAPDYRHFLCMVDLLSRAGRLEAAENLIHDMPFLPDAVAWTSLLSGC 545
Query: 409 AIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDD 452
+H +A + K+ +E + V T + + + +G DD
Sbjct: 546 KLHNDTKRAARVADKLFELESEDEHSTV-TLLSNVYAEAGRWDD 588
>gi|297596302|ref|NP_001042337.2| Os01g0205200 [Oryza sativa Japonica Group]
gi|56201494|dbj|BAD72991.1| pentatricopeptide repeat protein -like [Oryza sativa Japonica
Group]
gi|255672984|dbj|BAF04251.2| Os01g0205200 [Oryza sativa Japonica Group]
Length = 658
Score = 359 bits (921), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 196/572 (34%), Positives = 313/572 (54%), Gaps = 11/572 (1%)
Query: 48 DGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISA 107
DG VH +++K GF V LI Y+K + + V DEMP R ++SWNSII
Sbjct: 2 DGLVVHGYLVKYGFGAQCAVCNALISFYAKSNRIEDALMVFDEMP--QRDIISWNSIIGG 59
Query: 108 HSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGC-----SFRQGISMHCCVYKLGLLN 162
+ L D+A+ + MW+ G EL ++T +SV+ C SF G+ +H + GL++
Sbjct: 60 CASNGLYDKAVELFVRMWLEGQELDSTTLLSVMPACVQSHYSFIGGV-VHGYSVRTGLIS 118
Query: 163 NEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQM 222
E L N+++ MY+ IF + + ++VSWT +I Y G+ ++ GL +M
Sbjct: 119 -ETSLGNALLDMYSNCSDWRSTNKIFRNMEQKNVVSWTAMITSYTRAGHFDKVAGLFQEM 177
Query: 223 RRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDL 282
+ PD+ + + A +L S+H +++G P+ N L+ MY KCG +
Sbjct: 178 GLEGIRPDVFAITSALDAFAGNESLKHGKSVHGYAIRNGIEEVLPVANALMEMYVKCGYM 237
Query: 283 ELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSAC 342
E AR +FD V +K W ++IGGY++ +EA LF +L +RPN T+A L A
Sbjct: 238 EEARFIFDHVTKKDTISWNTLIGGYSRSNLANEAFTLFNEML-LQLRPNAVTMACILPAA 296
Query: 343 AELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWS 402
A L SL +G+E+ Y V G + V +L+ M+ KCG + A+ +F+ + +K+L W+
Sbjct: 297 ASLSSLERGREMHAYAVRRGYLEDNFVANALVDMYVKCGALLLARRLFDMLTNKNLISWT 356
Query: 403 AMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQS 462
MI GY +HG G A+ LF +M+ G++PDA +++IL ACSHSG+ D+G FF +M++
Sbjct: 357 IMIAGYGMHGRGRDAIALFEQMKG-SGIQPDAGSFSAILYACSHSGLRDEGWRFFNAMRN 415
Query: 463 NFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGE 522
IEP ++HY C+VDLL G A + I MP+E + +W LL C H NV+L E
Sbjct: 416 EHRIEPKLKHYACMVDLLCHTGNLKEAYEFIETMPIEPDSSIWVSLLRGCRIHRNVKLAE 475
Query: 523 YAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSV 582
A+ + L P +TG Y+L+AN++ A W+ + + R L + G S +E+ G
Sbjct: 476 KVAEMVFELEPENTGYYVLLANIYAEAERWEAVRKLKNKVGGRGLRENTGCSWIEVRGKA 535
Query: 583 QVFVAGDRSHHLSVDIRKTLKELHIKLLEAGY 614
+F A +R+H + I + L ++ ++ E G+
Sbjct: 536 HIFFAENRNHPQGMRIAEFLDDVARRMQEEGH 567
Score = 206 bits (523), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 123/422 (29%), Positives = 217/422 (51%), Gaps = 20/422 (4%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+I +NG +++ + + M G +S T V+ AC + + G VH + ++ G
Sbjct: 56 IIGGCASNGLYDKAVELFVRMWLEGQELDSTTLLSVMPACVQSHYSFIGGVVHGYSVRTG 115
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+ + L+DMYS CSD+ S+ K+ M ++VVSW ++I++++RA D+ +
Sbjct: 116 LISETSLGNALLDMYSNCSDWRSTNKIFRNM--EQKNVVSWTAMITSYTRAGHFDKVAGL 173
Query: 121 LKEMWVLGLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
+EM + G+ S + S + G S+H + G + +P+AN++M MY
Sbjct: 174 FQEMGLEGIRPDVFAITSALDAFAGNESLKHGKSVHGYAIRNG-IEEVLPVANALMEMYV 232
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K G + EAR IFD + + +SW T+IGGY NEAF L N+M + + P+ V
Sbjct: 233 KCGYMEEARFIFDHVTKKDTISWNTLIGGYSRSNLANEAFTLFNEM-LLQLRPNAVTMAC 291
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
++ A + +L MH+ ++ GY ++ + N LV MY KCG L LARR+FD + K+
Sbjct: 292 ILPAAASLSSLERGREMHAYAVRRGYLEDNFVANALVDMYVKCGALLLARRLFDMLTNKN 351
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEE 356
+ WT MI GY G +A+ LF+++ + ++P+ + + L AC+ G +G
Sbjct: 352 LISWTIMIAGYGMHGRGRDAIALFEQMKGSGIQPDAGSFSAILYACSHSGLRDEG----- 406
Query: 357 YIVLNGLESNRQVQTSLIH------MFSKCGRINKAKEVFERVP-DKDLAVWSAMINGYA 409
+ N + + +++ L H + G + +A E E +P + D ++W +++ G
Sbjct: 407 WRFFNAMRNEHRIEPKLKHYACMVDLLCHTGNLKEAYEFIETMPIEPDSSIWVSLLRGCR 466
Query: 410 IH 411
IH
Sbjct: 467 IH 468
>gi|347954530|gb|AEP33765.1| organelle transcript processing 82, partial [Lepidium sativum]
Length = 672
Score = 358 bits (920), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 196/561 (34%), Positives = 318/561 (56%), Gaps = 45/561 (8%)
Query: 101 WNSIISAHSRACLNDEAILVLKE---MWVLGLELSASTFVSVVSGCS----FRQGISMHC 153
WN++ H+ LN +++ LK M LGL ++ +F ++ C+ +G +H
Sbjct: 33 WNTMFRGHA---LNSDSVTALKLYVCMISLGLLPNSYSFPFLLKSCAKSKALIEGQQIHG 89
Query: 154 CVYKLGLLNNEIPLANSVMSMYAKFGK-------------------------------VN 182
V KLG + ++ + S++SMYA+ G+ +N
Sbjct: 90 HVLKLGY-DLDMYVNTSLISMYAQNGRLEDAHKVFDRSSHRHVVSYTALITGYASRGYIN 148
Query: 183 EARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCA 242
AR +FDEI +VSW +I GYV N EA L M + +V PD + ++ CA
Sbjct: 149 NARKLFDEISVKDVVSWNAMISGYVETCNFKEALELYKDMMKTNVKPDESTMVTVVSACA 208
Query: 243 QVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTS 302
Q G++ L +HS + G+ + + N+L+ +Y+KCG++E A +F + +K V W +
Sbjct: 209 QSGSIELGRQLHSWIEDHGFGSNIKIVNVLIDLYSKCGEVETACGLFQGLAKKDVISWNT 268
Query: 303 MIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYI--VL 360
+IGG+ + EA+ LF+ +L++ PN+ T+ + L ACA LG++ G+ I YI L
Sbjct: 269 LIGGHTHMNLYKEALLLFQEMLRSGESPNDVTMLSVLPACAHLGAIDIGRWIHVYINKRL 328
Query: 361 NGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNL 420
G+ + + TSLI M++KCG I AK+VF+ + + L+ W+AMI G+A+HG + A +L
Sbjct: 329 KGVTNASSLLTSLIDMYAKCGDIEAAKQVFDSMLTRSLSSWNAMIFGFAMHGKANAAFDL 388
Query: 421 FYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLL 480
F KM+ G+ PD + + +LSACSHSGM+D G F+SM ++ I P +EHY C++DLL
Sbjct: 389 FSKMRK-NGIDPDDITFVGLLSACSHSGMLDLGRHIFRSMSQDYKITPKLEHYGCMIDLL 447
Query: 481 GRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYI 540
G G F A + I MP+E +W LL AC H+NVELGE A+NL+ + P + G+Y+
Sbjct: 448 GHCGLFKEAKEMIRTMPMEPDGVIWCSLLKACKMHNNVELGESYAQNLIKIEPENPGSYV 507
Query: 541 LMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRK 600
L++N++ +AG W + A R L++D+ + K PG S +EID V F+ GD+ H + +I +
Sbjct: 508 LLSNIYATAGRWDQVAKIRTLLNDKGIKKAPGCSSIEIDSVVHEFIIGDKFHPRNREIYR 567
Query: 601 TLKELHIKLLEAGYIAEADIV 621
L+E+ + + E G++ + V
Sbjct: 568 MLEEMEMLMEETGFVPDTSEV 588
Score = 226 bits (577), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 151/532 (28%), Positives = 251/532 (47%), Gaps = 84/532 (15%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
M R N L Y M+ G+ NS++FP +LK+CA ++ +G+++H HVLK+G
Sbjct: 36 MFRGHALNSDSVTALKLYVCMISLGLLPNSYSFPFLLKSCAKSKALIEGQQIHGHVLKLG 95
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVR-------------------------- 94
+ D +V T LI MY++ + KV D R
Sbjct: 96 YDLDMYVNTSLISMYAQNGRLEDAHKVFDRSSHRHVVSYTALITGYASRGYINNARKLFD 155
Query: 95 ---LRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGC----SFRQ 147
++ VVSWN++IS + C EA+ + K+M ++ ST V+VVS C S
Sbjct: 156 EISVKDVVSWNAMISGYVETCNFKEALELYKDMMKTNVKPDESTMVTVVSACAQSGSIEL 215
Query: 148 GISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYV 207
G +H + G +N I + N ++ +Y+K G+V A +F + + ++SW T+IGG+
Sbjct: 216 GRQLHSWIEDHGFGSN-IKIVNVLIDLYSKCGEVETACGLFQGLAKKDVISWNTLIGGHT 274
Query: 208 NVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLK--SGYNNE 265
++ EA L +M R +P+ V L+++ CA +G + + +H + K G N
Sbjct: 275 HMNLYKEALLLFQEMLRSGESPNDVTMLSVLPACAHLGAIDIGRWIHVYINKRLKGVTNA 334
Query: 266 DPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLK 325
L L+ MY KCGD+E A++VFD++L +S+ W +MI G+A G + A +LF ++ K
Sbjct: 335 SSLLTSLIDMYAKCGDIEAAKQVFDSMLTRSLSSWNAMIFGFAMHGKANAAFDLFSKMRK 394
Query: 326 TSVRPNEATLATTLSACAELGSLSKGKEI-----EEYIVLNGLESNRQVQTSLIHMFSKC 380
+ P++ T LSAC+ G L G+ I ++Y + LE +I + C
Sbjct: 395 NGIDPDDITFVGLLSACSHSGMLDLGRHIFRSMSQDYKITPKLEH----YGCMIDLLGHC 450
Query: 381 GRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSI 440
G +AKE+ +P ++PD V++ S+
Sbjct: 451 GLFKEAKEMIRTMP-----------------------------------MEPDGVIWCSL 475
Query: 441 LSACSHSGMVDDGLSFFKSMQSNFGIEP-SIEHYLCLVDLLGRAGRFDLALK 491
L AC V+ G S+ +++ IEP + Y+ L ++ AGR+D K
Sbjct: 476 LKACKMHNNVELGESYAQNL---IKIEPENPGSYVLLSNIYATAGRWDQVAK 524
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 103/359 (28%), Positives = 177/359 (49%), Gaps = 35/359 (9%)
Query: 170 SVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTP 229
SV+S + F ++ A SIF+ I E +++ W T+ G+ + A L M + + P
Sbjct: 6 SVLSPH--FDGLSYAISIFETIQEPNLLIWNTMFRGHALNSDSVTALKLYVCMISLGLLP 63
Query: 230 DLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVF 289
+ F L+ CA+ L +H +LK GY+ + ++ L+SMY + G LE A +VF
Sbjct: 64 NSYSFPFLLKSCAKSKALIEGQQIHGHVLKLGYDLDMYVNTSLISMYAQNGRLEDAHKVF 123
Query: 290 DAVLEKSVFLWTSMIGGYAQLGYPS-------------------------------EAVN 318
D + V +T++I GYA GY + EA+
Sbjct: 124 DRSSHRHVVSYTALITGYASRGYINNARKLFDEISVKDVVSWNAMISGYVETCNFKEALE 183
Query: 319 LFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFS 378
L+K ++KT+V+P+E+T+ T +SACA+ GS+ G+++ +I +G SN ++ LI ++S
Sbjct: 184 LYKDMMKTNVKPDESTMVTVVSACAQSGSIELGRQLHSWIEDHGFGSNIKIVNVLIDLYS 243
Query: 379 KCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYT 438
KCG + A +F+ + KD+ W+ +I G+ + +AL LF +M G P+ V
Sbjct: 244 KCGEVETACGLFQGLAKKDVISWNTLIGGHTHMNLYKEALLLFQEMLR-SGESPNDVTML 302
Query: 439 SILSACSHSGMVDDGLSFFKSMQSNF-GIEPSIEHYLCLVDLLGRAGRFDLALKTIHEM 496
S+L AC+H G +D G + G+ + L+D+ + G + A + M
Sbjct: 303 SVLPACAHLGAIDIGRWIHVYINKRLKGVTNASSLLTSLIDMYAKCGDIEAAKQVFDSM 361
>gi|147856457|emb|CAN80769.1| hypothetical protein VITISV_013866 [Vitis vinifera]
Length = 761
Score = 358 bits (920), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 208/654 (31%), Positives = 333/654 (50%), Gaps = 80/654 (12%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
M+R ++ + + + M GV ++F +P+++K+ N G H+HVLK+G
Sbjct: 71 MLRFYSHLQDHAKVVLMFEHMQGCGVRPDAFVYPILIKSAGN-----GGIGFHAHVLKLG 125
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
DAFV+ +IDMY++ +RKV DE+P R V WN+++S + + +A +
Sbjct: 126 HGSDAFVRNAVIDMYARLGPIGHARKVFDEIPDYERKVADWNAMVSGYWKWESEGQAQWL 185
Query: 121 LKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGK 180
M E + T+ ++V+G YAK
Sbjct: 186 FDVM----PERNVITWTAMVTG--------------------------------YAKVKD 209
Query: 181 VNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILG 240
+ AR FD + E S+VSW ++ GY G E L ++M + PD ++ +I
Sbjct: 210 LEAARRYFDCMPERSVVSWNAMLSGYAQNGLAEEVLRLFDEMVNAGIEPDETTWVTVISA 269
Query: 241 CAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFD---------- 290
C+ G+ LA S+ L + + L+ MY KCG + ARR+FD
Sbjct: 270 CSSRGDPCLAASLVRTLHQKQIQLNCFVRTALLDMYAKCGSIGAARRIFDELGAYRNSVT 329
Query: 291 ----------------------AVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTS- 327
+ ++V W SMI GYAQ G + A+ LFK ++
Sbjct: 330 WNAMISAYTRVGNLDSARELFNTMPGRNVVTWNSMIAGYAQNGQSAMAIELFKEMITAKK 389
Query: 328 VRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAK 387
+ P+E T+ + +SAC LG+L G + ++ N ++ + ++I M+S+CG + AK
Sbjct: 390 LTPDEVTMVSVISACGHLGALELGNWVVRFLTENQIKLSISGHNAMIFMYSRCGSMEDAK 449
Query: 388 EVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHS 447
VF+ + +D+ ++ +I+G+A HG G +A+NL M+ G++PD V + +L+ACSH+
Sbjct: 450 RVFQEMATRDVVSYNTLISGFAAHGHGVEAINLMSTMKE-GGIEPDRVTFIGVLTACSHA 508
Query: 448 GMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAP 507
G++++G F+S++ +P+I+HY C+VDLLGR G + A +T+ MP+E A V+
Sbjct: 509 GLLEEGRKVFESIK-----DPAIDHYACMVDLLGRVGELEDAKRTMERMPMEPHAGVYGS 563
Query: 508 LLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRL 567
LL+A H VELGE AA L L P ++GN+IL++N++ SAG WK+ R M +
Sbjct: 564 LLNASRIHKQVELGELAANKLFELEPDNSGNFILLSNIYASAGRWKDVERIREAMKKGGV 623
Query: 568 TKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKELHIKLLEAGYIAEADIV 621
K GWS VE G + F+ DRSH S DI + L EL K+ EAGYIA+ V
Sbjct: 624 KKTTGWSWVEYGGKLHKFIVADRSHERSDDIYQLLIELRKKMREAGYIADKSCV 677
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 75/331 (22%), Positives = 152/331 (45%), Gaps = 48/331 (14%)
Query: 242 AQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKC-GDLELARRVFDAVLEKSVFLW 300
++VGN +H+ ++ + ++ + LL++ T+ +F++ L +VF++
Sbjct: 9 SRVGNFSHLRQLHAQIIHNSLHHHNYWVALLINHCTRLRAPPHYTHLLFNSTLNPNVFVF 68
Query: 301 TSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVL 360
TSM+ Y+ L ++ V +F+ + VRP+ + + + G +++
Sbjct: 69 TSMLRFYSHLQDHAKVVLMFEHMQGCGVRPDAFVYPILIKSAG-----NGGIGFHAHVLK 123
Query: 361 NGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPD--KDLAVWSAMINGYAIHGMGDQAL 418
G S+ V+ ++I M+++ G I A++VF+ +PD + +A W+AM++GY QA
Sbjct: 124 LGHGSDAFVRNAVIDMYARLGPIGHARKVFDEIPDYERKVADWNAMVSGYWKWESEGQAQ 183
Query: 419 NLF------------------YKMQHVEGLK------PD--AVVYTSILSACSHSGMVDD 452
LF K++ +E + P+ V + ++LS + +G+ ++
Sbjct: 184 WLFDVMPERNVITWTAMVTGYAKVKDLEAARRYFDCMPERSVVSWNAMLSGYAQNGLAEE 243
Query: 453 GLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLA---LKTIHEMPVEVQAQVWAPLL 509
L F M N GIEP ++ ++ G LA ++T+H+ +++ V LL
Sbjct: 244 VLRLFDEM-VNAGIEPDETTWVTVISACSSRGDPCLAASLVRTLHQKQIQLNCFVRTALL 302
Query: 510 SACMKHHNV--------ELGEYAAKNLLTLN 532
K ++ ELG Y +N +T N
Sbjct: 303 DMYAKCGSIGAARRIFDELGAY--RNSVTWN 331
>gi|356519174|ref|XP_003528249.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like [Glycine max]
Length = 975
Score = 358 bits (920), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 200/624 (32%), Positives = 344/624 (55%), Gaps = 12/624 (1%)
Query: 6 TNNGSFEETLSTYSSML---QTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQ 62
+ NG F E + +L + G+ + T V+ ACA + + G VH K+G
Sbjct: 272 SENGGFGECCGVFKRLLISEEEGLVPDVATMVTVIPACAAVGEVRMGMVVHGLAFKLGIT 331
Query: 63 QDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLK 122
++ V L+DMYSKC +R + D + +VVSWN+II +S+ +L+
Sbjct: 332 EEVTVNNSLVDMYSKCGYLGEARALFDMNGGK--NVVSWNTIIWGYSKEGDFRGVFELLQ 389
Query: 123 EMWVL-GLELSASTFVSVVSGCSFRQGI----SMHCCVYKLGLLNNEIPLANSVMSMYAK 177
EM + ++ T ++V+ CS + +H ++ G L +E+ +AN+ ++ YAK
Sbjct: 390 EMQREEKVRVNEVTVLNVLPACSGEHQLLSLKEIHGYAFRHGFLKDEL-VANAFVAAYAK 448
Query: 178 FGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNL 237
++ A +F + ++ SW +IG + G ++ L M + PD +L
Sbjct: 449 CSSLDCAERVFCGMEGKTVSSWNALIGAHAQNGFPGKSLDLFLVMMDSGMDPDRFTIGSL 508
Query: 238 ILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSV 297
+L CA++ L +H +L++G ++ + L+S+Y +C + L + +FD + KS+
Sbjct: 509 LLACARLKFLRCGKEIHGFMLRNGLELDEFIGISLMSLYIQCSSMLLGKLIFDKMENKSL 568
Query: 298 FLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEY 357
W MI G++Q P EA++ F+++L ++P E + L AC+++ +L GKE+ +
Sbjct: 569 VCWNVMITGFSQNELPCEALDTFRQMLSGGIKPQEIAVTGVLGACSQVSALRLGKEVHSF 628
Query: 358 IVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQA 417
+ L + V +LI M++KCG + +++ +F+RV +KD AVW+ +I GY IHG G +A
Sbjct: 629 ALKAHLSEDAFVTCALIDMYAKCGCMEQSQNIFDRVNEKDEAVWNVIIAGYGIHGHGLKA 688
Query: 418 LNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLV 477
+ LF MQ+ +G +PD+ + +L AC+H+G+V +GL + MQ+ +G++P +EHY C+V
Sbjct: 689 IELFELMQN-KGGRPDSFTFLGVLIACNHAGLVTEGLKYLGQMQNLYGVKPKLEHYACVV 747
Query: 478 DLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTG 537
D+LGRAG+ ALK ++EMP E + +W+ LLS+C + ++E+GE +K LL L P
Sbjct: 748 DMLGRAGQLTEALKLVNEMPDEPDSGIWSSLLSSCRNYGDLEIGEEVSKKLLELEPNKAE 807
Query: 538 NYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVD 597
NY+L++NL+ G W E R M + L K+ G S +EI G V F+ D S S
Sbjct: 808 NYVLLSNLYAGLGKWDEVRKVRQRMKENGLHKDAGCSWIEIGGMVYRFLVSDGSLSESKK 867
Query: 598 IRKTLKELHIKLLEAGYIAEADIV 621
I++T +L K+ + GY + V
Sbjct: 868 IQQTWIKLEKKISKIGYKPDTSCV 891
Score = 250 bits (639), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 151/455 (33%), Positives = 249/455 (54%), Gaps = 13/455 (2%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQ-TGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKV 59
++ + N F + +S + +L T + ++FT P V KACA + + G+ VH+ LK
Sbjct: 165 LLSGYSRNALFRDAISLFLELLSATDLAPDNFTLPCVAKACAGVADVELGEAVHALALKA 224
Query: 60 GFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAIL 119
G DAFV LI MY KC S+ KV + M R R++VSWNS++ A S E
Sbjct: 225 GGFSDAFVGNALIAMYGKCGFVESAVKVFETM--RNRNLVSWNSVMYACSENGGFGECCG 282
Query: 120 VLKEMWVL---GLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVM 172
V K + + GL +T V+V+ C+ R G+ +H +KLG + E+ + NS++
Sbjct: 283 VFKRLLISEEEGLVPDVATMVTVIPACAAVGEVRMGMVVHGLAFKLG-ITEEVTVNNSLV 341
Query: 173 SMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRR-MSVTPDL 231
MY+K G + EAR++FD G ++VSW TII GY G+ F L +M+R V +
Sbjct: 342 DMYSKCGYLGEARALFDMNGGKNVVSWNTIIWGYSKEGDFRGVFELLQEMQREEKVRVNE 401
Query: 232 VVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDA 291
V LN++ C+ L +H + G+ ++ + N V+ Y KC L+ A RVF
Sbjct: 402 VTVLNVLPACSGEHQLLSLKEIHGYAFRHGFLKDELVANAFVAAYAKCSSLDCAERVFCG 461
Query: 292 VLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKG 351
+ K+V W ++IG +AQ G+P ++++LF ++ + + P+ T+ + L ACA L L G
Sbjct: 462 MEGKTVSSWNALIGAHAQNGFPGKSLDLFLVMMDSGMDPDRFTIGSLLLACARLKFLRCG 521
Query: 352 KEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIH 411
KEI +++ NGLE + + SL+ ++ +C + K +F+++ +K L W+ MI G++ +
Sbjct: 522 KEIHGFMLRNGLELDEFIGISLMSLYIQCSSMLLGKLIFDKMENKSLVCWNVMITGFSQN 581
Query: 412 GMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSH 446
+ +AL+ F +M G+KP + T +L ACS
Sbjct: 582 ELPCEALDTFRQMLS-GGIKPQEIAVTGVLGACSQ 615
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 129/462 (27%), Positives = 222/462 (48%), Gaps = 26/462 (5%)
Query: 2 IRNSTNNGSFEETLSTYSSMLQTGVHGNS----FTFPLVLKACANINSIWDGKRVH---- 53
+ N ++G+ + L+ S Q G +S ++L+AC + +I G++VH
Sbjct: 60 LHNLCDSGNLNDALNLLHSHAQNGTVSSSDISKEAIGILLRACGHHKNIHVGRKVHALVS 119
Query: 54 -SHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRAC 112
SH L+ D + T +I MYS C SR V D + + + +N+++S +SR
Sbjct: 120 ASHKLR----NDVVLSTRIIAMYSACGSPSDSRGVFD--AAKEKDLFLYNALLSGYSRNA 173
Query: 113 LNDEAI-LVLKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPL 167
L +AI L L+ + L T V C+ G ++H K G ++ +
Sbjct: 174 LFRDAISLFLELLSATDLAPDNFTLPCVAKACAGVADVELGEAVHALALKAGGFSDAF-V 232
Query: 168 ANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQM---RR 224
N++++MY K G V A +F+ + ++VSW +++ G E G+ ++
Sbjct: 233 GNALIAMYGKCGFVESAVKVFETMRNRNLVSWNSVMYACSENGGFGECCGVFKRLLISEE 292
Query: 225 MSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLEL 284
+ PD+ + +I CA VG + + + +H L K G E ++N LV MY+KCG L
Sbjct: 293 EGLVPDVATMVTVIPACAAVGEVRMGMVVHGLAFKLGITEEVTVNNSLVDMYSKCGYLGE 352
Query: 285 ARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLK-TSVRPNEATLATTLSACA 343
AR +FD K+V W ++I GY++ G L + + + VR NE T+ L AC+
Sbjct: 353 ARALFDMNGGKNVVSWNTIIWGYSKEGDFRGVFELLQEMQREEKVRVNEVTVLNVLPACS 412
Query: 344 ELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSA 403
L KEI Y +G + V + + ++KC ++ A+ VF + K ++ W+A
Sbjct: 413 GEHQLLSLKEIHGYAFRHGFLKDELVANAFVAAYAKCSSLDCAERVFCGMEGKTVSSWNA 472
Query: 404 MINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACS 445
+I +A +G ++L+LF M G+ PD S+L AC+
Sbjct: 473 LIGAHAQNGFPGKSLDLFLVMMD-SGMDPDRFTIGSLLLACA 513
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 120/288 (41%), Gaps = 33/288 (11%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI + N E L T+ ML G+ VL AC+ ++++ GK VHS LK
Sbjct: 574 MITGFSQNELPCEALDTFRQMLSGGIKPQEIAVTGVLGACSQVSALRLGKEVHSFALKAH 633
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+DAFV LIDMY+KC S+ + D + + +V WN II+ + +AI +
Sbjct: 634 LSEDAFVTCALIDMYAKCGCMEQSQNIFDRVNEKDEAV--WNVIIAGYGIHGHGLKAIEL 691
Query: 121 LKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGK 180
+ M G + TF+ V+ C+ GL+ + + ++Y K
Sbjct: 692 FELMQNKGGRPDSFTFLGVLIACN------------HAGLVTEGLKYLGQMQNLYGVKPK 739
Query: 181 VNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILG 240
+ + D +G G + EA L N+M PD ++ +L+
Sbjct: 740 LEHYACVVDMLGRA---------------GQLTEALKLVNEMPD---EPDSGIWSSLLSS 781
Query: 241 CAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRV 288
C G+L + + LL+ N + LL ++Y G + R+V
Sbjct: 782 CRNYGDLEIGEEVSKKLLELEPNKAENY-VLLSNLYAGLGKWDEVRKV 828
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/124 (23%), Positives = 65/124 (52%), Gaps = 1/124 (0%)
Query: 331 NEATLATTLSACAELGSLSKGKEIEEYI-VLNGLESNRQVQTSLIHMFSKCGRINKAKEV 389
++ + L AC ++ G+++ + + L ++ + T +I M+S CG + ++ V
Sbjct: 91 SKEAIGILLRACGHHKNIHVGRKVHALVSASHKLRNDVVLSTRIIAMYSACGSPSDSRGV 150
Query: 390 FERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGM 449
F+ +KDL +++A+++GY+ + + A++LF ++ L PD + AC+
Sbjct: 151 FDAAKEKDLFLYNALLSGYSRNALFRDAISLFLELLSATDLAPDNFTLPCVAKACAGVAD 210
Query: 450 VDDG 453
V+ G
Sbjct: 211 VELG 214
>gi|449441574|ref|XP_004138557.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Cucumis sativus]
Length = 766
Score = 358 bits (919), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 199/617 (32%), Positives = 340/617 (55%), Gaps = 11/617 (1%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+I NG F + + M G+ + F + +L+ C ++SI G VH+ ++ G
Sbjct: 142 LIAGLAENGLFLDGFEFFCEMQSQGIFPDQFAYSGILQICIGLDSIELGNMVHAQIVIRG 201
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F FV T L++MY+K + S KV + M +VVSWN++I+ + L +A +
Sbjct: 202 FTSHTFVSTALLNMYAKLQEIEDSYKVFNTMTEV--NVVSWNAMITGFTSNDLYLDAFDL 259
Query: 121 LKEMWVLGLELSASTFVSVVSGCSFRQGIS----MHCCVYKLGLLNNEIPLANSVMSMYA 176
M G+ A TF+ V + ++ + +LG+ +N + + +++ M +
Sbjct: 260 FLRMMGEGVTPDAQTFIGVAKAIGMLRDVNKAKEVSGYALELGVDSNTL-VGTALIDMNS 318
Query: 177 KFGKVNEARSIFDE--IGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVF 234
K G + EARSIF+ I W +I GY+ G +A L +M + + D +
Sbjct: 319 KCGSLQEARSIFNSHFITCRFNAPWNAMISGYLRSGFNEKALELFAKMCQNDIYLDHYTY 378
Query: 235 LNLILGCAQVGNLFLALSMHSLLLKSGYN-NEDPLDNLLVSMYTKCGDLELARRVFDAVL 293
++ A + L L +H+ +KSG N + N + + Y KCG LE R+VF+ +
Sbjct: 379 CSVFNAIAALKCLSLGKKVHARAIKSGLEVNYVSISNAVANAYAKCGSLEDVRKVFNRME 438
Query: 294 EKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKE 353
++ + WTS++ Y+Q +A+ +F + + PN+ T ++ L +CA L L G++
Sbjct: 439 DRDLISWTSLVTAYSQCSEWDKAIEIFSNMRAEGIAPNQFTFSSVLVSCANLCLLEYGQQ 498
Query: 354 IEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGM 413
+ I GL+ ++ ++++L+ M++KCG + AK+VF R+ + D W+A+I G+A HG+
Sbjct: 499 VHGIICKVGLDMDKCIESALVDMYAKCGCLGDAKKVFNRISNADTVSWTAIIAGHAQHGI 558
Query: 414 GDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHY 473
D AL LF +M + G++P+AV + +L ACSH G+V++GL +FK M+ +G+ P +EHY
Sbjct: 559 VDDALQLFRRMVQL-GVEPNAVTFLCVLFACSHGGLVEEGLQYFKLMKKTYGLVPEMEHY 617
Query: 474 LCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNP 533
C+VDLL R G + A++ I MPVE VW LL AC H NVELGE AA+ +L+
Sbjct: 618 ACIVDLLSRVGHLNDAMEFISRMPVEPNEMVWQTLLGACRVHGNVELGELAAQKILSFKA 677
Query: 534 GSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHH 593
++ Y+L++N + +G +K+ + R LM ++ + KEPG S + ++G++ F AGD+ H
Sbjct: 678 ENSATYVLLSNTYIESGSYKDGLSLRHLMKEQGVKKEPGCSWISVNGTLHKFYAGDQQHP 737
Query: 594 LSVDIRKTLKELHIKLL 610
I L+EL +KL+
Sbjct: 738 EKDKIYAKLEELKLKLI 754
Score = 164 bits (416), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 118/494 (23%), Positives = 237/494 (47%), Gaps = 19/494 (3%)
Query: 34 PLV--LKACANINSIWDGKRVHSHVLKVGF--QQDAFVQTGLIDMYSKCSDFVSSRKVLD 89
PLV L+ C + + K VH +LK F + + YSKCSD ++ ++ D
Sbjct: 70 PLVDLLRDCVDARFLKQAKTVHGFLLKSKFSNHHSLVLLNHVAHAYSKCSDIDAACRLFD 129
Query: 90 EMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGC----SF 145
+M R+ SW +I+ + L + EM G+ + ++ C S
Sbjct: 130 QMSQ--RNTFSWTVLIAGLAENGLFLDGFEFFCEMQSQGIFPDQFAYSGILQICIGLDSI 187
Query: 146 RQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGG 205
G +H + G ++ ++ ++++MYAK ++ ++ +F+ + E ++VSW +I G
Sbjct: 188 ELGNMVHAQIVIRGFTSHTF-VSTALLNMYAKLQEIEDSYKVFNTMTEVNVVSWNAMITG 246
Query: 206 YVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNE 265
+ + +AF L +M VTPD F+ + + ++ A + L+ G ++
Sbjct: 247 FTSNDLYLDAFDLFLRMMGEGVTPDAQTFIGVAKAIGMLRDVNKAKEVSGYALELGVDSN 306
Query: 266 DPLDNLLVSMYTKCGDLELARRVFDAVLEKSVF--LWTSMIGGYAQLGYPSEAVNLFKRL 323
+ L+ M +KCG L+ AR +F++ F W +MI GY + G+ +A+ LF ++
Sbjct: 307 TLVGTALIDMNSKCGSLQEARSIFNSHFITCRFNAPWNAMISGYLRSGFNEKALELFAKM 366
Query: 324 LKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNR-QVQTSLIHMFSKCGR 382
+ + + T + +A A L LS GK++ + +GLE N + ++ + ++KCG
Sbjct: 367 CQNDIYLDHYTYCSVFNAIAALKCLSLGKKVHARAIKSGLEVNYVSISNAVANAYAKCGS 426
Query: 383 INKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILS 442
+ ++VF R+ D+DL W++++ Y+ D+A+ +F M+ EG+ P+ ++S+L
Sbjct: 427 LEDVRKVFNRMEDRDLISWTSLVTAYSQCSEWDKAIEIFSNMR-AEGIAPNQFTFSSVLV 485
Query: 443 ACSHSGMVDDGLSFFKSM-QSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQ 501
+C++ +++ G + + ++ IE LVD+ + G A K + +
Sbjct: 486 SCANLCLLEYGQQVHGIICKVGLDMDKCIES--ALVDMYAKCGCLGDAKKVFNRIS-NAD 542
Query: 502 AQVWAPLLSACMKH 515
W +++ +H
Sbjct: 543 TVSWTAIIAGHAQH 556
>gi|297719939|ref|NP_001172331.1| Os01g0355000 [Oryza sativa Japonica Group]
gi|53791352|dbj|BAD52598.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|215768699|dbj|BAH00928.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255673214|dbj|BAH91061.1| Os01g0355000 [Oryza sativa Japonica Group]
Length = 877
Score = 358 bits (919), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 196/618 (31%), Positives = 332/618 (53%), Gaps = 8/618 (1%)
Query: 7 NNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAF 66
N + + + M+ +G+ F F V+ AC +I G++VH+ V+++G+ +D F
Sbjct: 179 KNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIEAGRQVHAMVVRMGYDKDVF 238
Query: 67 VQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWV 126
L+DMY K + + ++MP VVSWN++IS + AI +L +M
Sbjct: 239 TANALVDMYMKMGRVDIASVIFEKMPDS--DVVSWNALISGCVLNGHDHRAIELLLQMKY 296
Query: 127 LGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVN 182
GL + T S++ CS F G +H + K +++ + ++ MYAK ++
Sbjct: 297 SGLVPNVFTLSSILKACSGAGAFDLGRQIHGFMIKANADSDDY-IGVGLVDMYAKNHFLD 355
Query: 183 EARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCA 242
+AR +FD + ++ +I G + G +EA L ++R+ + + ++ A
Sbjct: 356 DARKVFDWMFHRDLILCNALISGCSHGGRHDEALSLFYELRKEGLGVNRTTLAAVLKSTA 415
Query: 243 QVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTS 302
+ +H+L +K G+ + + N L+ Y KC L A RVF+ + TS
Sbjct: 416 SLEAASTTRQVHALAVKIGFIFDAHVVNGLIDSYWKCSCLSDANRVFEECSSGDIIACTS 475
Query: 303 MIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNG 362
MI +Q + A+ LF +L+ + P+ L++ L+ACA L + +GK++ +++
Sbjct: 476 MITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQ 535
Query: 363 LESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFY 422
S+ +L++ ++KCG I A+ F +P++ + WSAMI G A HG G +AL LF
Sbjct: 536 FMSDAFAGNALVYTYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALELFG 595
Query: 423 KMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGR 482
+M EG+ P+ + TS+L AC+H+G+VD+ +F SM+ FGI+ + EHY C++DLLGR
Sbjct: 596 RMVD-EGINPNHITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIDRTEEHYSCMIDLLGR 654
Query: 483 AGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILM 542
AG+ D A++ ++ MP + A +W LL A H + ELG+ AA+ L L P +G ++L+
Sbjct: 655 AGKLDDAMELVNSMPFQANASIWGALLGASRVHKDPELGKLAAEKLFILEPEKSGTHVLL 714
Query: 543 ANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTL 602
AN + SAGMW E A R LM D + KEP S +E+ V F+ GD+SH ++ +I L
Sbjct: 715 ANTYASAGMWNEVAKVRKLMKDSNIKKEPAMSWIEVKDKVHTFIVGDKSHPMTKEIYAKL 774
Query: 603 KELHIKLLEAGYIAEADI 620
EL + +AG++ D+
Sbjct: 775 VELGDLMSKAGFVPNVDV 792
Score = 206 bits (523), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 132/444 (29%), Positives = 224/444 (50%), Gaps = 10/444 (2%)
Query: 6 TNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDA 65
+NNG + + M GV N F P+VLK + G +VH+ + GF D
Sbjct: 79 SNNGLPRSAIQAFHGMRAEGVCCNEFALPVVLKCVPDARL---GAQVHAMAMATGFGSDV 135
Query: 66 FVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMW 125
FV L+ MY +R+V +E R+ VSWN ++SA+ + +AI V EM
Sbjct: 136 FVANALVAMYGGFGFMDDARRVFNEADSE-RNAVSWNGLMSAYVKNDQCGDAIQVFGEMV 194
Query: 126 VLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKV 181
G++ + F VV+ C+ G +H V ++G + ++ AN+++ MY K G+V
Sbjct: 195 WSGIQPTEFGFSCVVNACTGSRNIEAGRQVHAMVVRMG-YDKDVFTANALVDMYMKMGRV 253
Query: 182 NEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGC 241
+ A IF+++ ++ +VSW +I G V G+ + A L QM+ + P++ +++ C
Sbjct: 254 DIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKYSGLVPNVFTLSSILKAC 313
Query: 242 AQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWT 301
+ G L +H ++K+ +++D + LV MY K L+ AR+VFD + + + L
Sbjct: 314 SGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDARKVFDWMFHRDLILCN 373
Query: 302 SMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLN 361
++I G + G EA++LF L K + N TLA L + A L + S +++ V
Sbjct: 374 ALISGCSHGGRHDEALSLFYELRKEGLGVNRTTLAAVLKSTASLEAASTTRQVHALAVKI 433
Query: 362 GLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLF 421
G + V LI + KC ++ A VFE D+ ++MI + G+ A+ LF
Sbjct: 434 GFIFDAHVVNGLIDSYWKCSCLSDANRVFEECSSGDIIACTSMITALSQCDHGEGAIKLF 493
Query: 422 YKMQHVEGLKPDAVVYTSILSACS 445
+M +GL+PD V +S+L+AC+
Sbjct: 494 MEMLR-KGLEPDPFVLSSLLNACA 516
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 107/417 (25%), Positives = 201/417 (48%), Gaps = 9/417 (2%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+I NG + M +G+ N FT +LKAC+ + G+++H ++K
Sbjct: 274 LISGCVLNGHDHRAIELLLQMKYSGLVPNVFTLSSILKACSGAGAFDLGRQIHGFMIKAN 333
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
D ++ GL+DMY+K +RKV D M R ++ N++IS S +DEA+ +
Sbjct: 334 ADSDDYIGVGLVDMYAKNHFLDDARKVFDWM--FHRDLILCNALISGCSHGGRHDEALSL 391
Query: 121 LKEMWVLGLELSASTFVSVVSGCSFRQGIS----MHCCVYKLGLLNNEIPLANSVMSMYA 176
E+ GL ++ +T +V+ + + S +H K+G + + + N ++ Y
Sbjct: 392 FYELRKEGLGVNRTTLAAVLKSTASLEAASTTRQVHALAVKIGFIFDA-HVVNGLIDSYW 450
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K +++A +F+E I++ T++I + A L +M R + PD V +
Sbjct: 451 KCSCLSDANRVFEECSSGDIIACTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSS 510
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
L+ CA + +H+ L+K + ++ N LV Y KCG +E A F ++ E+
Sbjct: 511 LLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSLPERG 570
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKE-IE 355
V W++MIGG AQ G+ A+ LF R++ + PN T+ + L AC G + + K
Sbjct: 571 VVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMTSVLCACNHAGLVDEAKRYFN 630
Query: 356 EYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVP-DKDLAVWSAMINGYAIH 411
+ G++ + + +I + + G+++ A E+ +P + ++W A++ +H
Sbjct: 631 SMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQANASIWGALLGASRVH 687
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 109/407 (26%), Positives = 209/407 (51%), Gaps = 12/407 (2%)
Query: 41 ANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVS 100
A ++ G +H+ +LK G A + LI YSKC +R+V DE+P VS
Sbjct: 15 AAAQALLPGAHLHASLLKSG--SLASFRNHLISFYSKCRRPCCARRVFDEIPDPCH--VS 70
Query: 101 WNSIISAHSRACLNDEAILVLKEMWVLGL---ELSASTFVSVVSGCSFRQGISMHCCVYK 157
W+S+++A+S L AI M G+ E + + V R G +H
Sbjct: 71 WSSLVTAYSNNGLPRSAIQAFHGMRAEGVCCNEFALPVVLKCVPDA--RLGAQVHAMAMA 128
Query: 158 LGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEI-GETSIVSWTTIIGGYVNVGNVNEAF 216
G +++ +AN++++MY FG +++AR +F+E E + VSW ++ YV +A
Sbjct: 129 TGF-GSDVFVANALVAMYGGFGFMDDARRVFNEADSERNAVSWNGLMSAYVKNDQCGDAI 187
Query: 217 GLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMY 276
+ +M + P F ++ C N+ +H+++++ GY+ + N LV MY
Sbjct: 188 QVFGEMVWSGIQPTEFGFSCVVNACTGSRNIEAGRQVHAMVVRMGYDKDVFTANALVDMY 247
Query: 277 TKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLA 336
K G +++A +F+ + + V W ++I G G+ A+ L ++ + + PN TL+
Sbjct: 248 MKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKYSGLVPNVFTLS 307
Query: 337 TTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDK 396
+ L AC+ G+ G++I +++ +S+ + L+ M++K ++ A++VF+ + +
Sbjct: 308 SILKACSGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDARKVFDWMFHR 367
Query: 397 DLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSA 443
DL + +A+I+G + G D+AL+LFY+++ EGL + ++L +
Sbjct: 368 DLILCNALISGCSHGGRHDEALSLFYELRK-EGLGVNRTTLAAVLKS 413
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 91/390 (23%), Positives = 181/390 (46%), Gaps = 21/390 (5%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+I ++ G +E LS + + + G+ N T VLK+ A++ + ++VH+ +K+G
Sbjct: 375 LISGCSHGGRHDEALSLFYELRKEGLGVNRTTLAAVLKSTASLEAASTTRQVHALAVKIG 434
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F DA V GLID Y KCS + +V +E +++ S+I+A S+ + AI +
Sbjct: 435 FIFDAHVVNGLIDSYWKCSCLSDANRVFEECSS--GDIIACTSMITALSQCDHGEGAIKL 492
Query: 121 LKEMWVLGLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
EM GLE S+++ C ++ QG +H + K +++ N+++ YA
Sbjct: 493 FMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFA-GNALVYTYA 551
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K G + +A F + E +VSW+ +IGG G+ A L +M + P+ + +
Sbjct: 552 KCGSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMTS 611
Query: 237 LILGCAQVGNLFLALS-MHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAV-LE 294
++ C G + A +S+ G + + + ++ + + G L+ A + +++ +
Sbjct: 612 VLCACNHAGLVDEAKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQ 671
Query: 295 KSVFLWTSMIGGYAQLGYPS----EAVNLFKRLLKTSVRPNEATLATTLSAC------AE 344
+ +W +++G P A LF +L+ LA T ++ A+
Sbjct: 672 ANASIWGALLGASRVHKDPELGKLAAEKLF--ILEPEKSGTHVLLANTYASAGMWNEVAK 729
Query: 345 LGSLSKGKEIEEYIVLNGLESNRQVQTSLI 374
+ L K I++ ++ +E +V T ++
Sbjct: 730 VRKLMKDSNIKKEPAMSWIEVKDKVHTFIV 759
>gi|449433141|ref|XP_004134356.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
Length = 654
Score = 358 bits (918), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 197/539 (36%), Positives = 314/539 (58%), Gaps = 16/539 (2%)
Query: 93 VRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSAS-----TFVSVVSGCS--- 144
R V++WNS++ A + + A+ EM LE S + TF S++ GC+
Sbjct: 38 TRELDVLTWNSMLRAFVNSNMPRRALQSYTEM----LERSRNVPDRFTFPSLLKGCALLL 93
Query: 145 -FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTII 203
F+ G +H V K +L++++ + ++++MYA G + AR +F+ +G + V WT++I
Sbjct: 94 EFKVGKVLHGQVVKY-MLHSDLYIETTLLNMYAACGDLKSARFLFERMGHRNKVVWTSMI 152
Query: 204 GGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYN 263
GY+ NEA L +M +PD V L+ CA++ +L + + +HS + +
Sbjct: 153 SGYMKNHCPNEALLLYKKMEEDGFSPDEVTMATLVSACAELKDLGVGMKLHSHIREMDMK 212
Query: 264 NEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRL 323
L + LV+MY KCGDL+ AR+VFD + +K V+ W+++I GY + +EA+ LF+ +
Sbjct: 213 ICAVLGSALVNMYAKCGDLKTARQVFDKLSDKDVYAWSALIFGYVKNNRSTEALQLFREV 272
Query: 324 LKTS-VRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGR 382
S +RPNE T+ +SACA+LG L G+ + +YI + + SLI MFSKCG
Sbjct: 273 AGGSNMRPNEVTILAVISACAQLGDLETGRWVHDYITRTQKGHSVSLNNSLIDMFSKCGD 332
Query: 383 INKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILS 442
I+ AK +F+ + KDL W++M+NG+A+HG+G +AL F MQ + L+PD + + +L+
Sbjct: 333 IDAAKRIFDSMSYKDLISWNSMVNGFALHGLGREALAQFRLMQTTD-LQPDEITFIGVLT 391
Query: 443 ACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQA 502
ACSH+G+V +G F +++ +G+ EHY C+VDLL RAG A + I MP++
Sbjct: 392 ACSHAGLVQEGKKLFYEIEALYGVRLKSEHYGCMVDLLCRAGLLAEAREFIRVMPLQPDG 451
Query: 503 QVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLM 562
+W +L AC ++N+ELGE AA+ LL L P + G YIL++N++ MW E R LM
Sbjct: 452 AIWGSMLGACRVYNNLELGEEAARFLLKLEPTNDGVYILLSNIYAKRKMWNEVKKVRELM 511
Query: 563 DDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKELHIKLLEAGYIAEADIV 621
+++ + K PG S V ID F+AGD SH +I L+++ KL AGY+A+ V
Sbjct: 512 NEKGIQKTPGCSSVVIDNIAHSFLAGDCSHPEIAEISIMLRQVREKLKLAGYVADTSEV 570
Score = 206 bits (524), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 123/436 (28%), Positives = 233/436 (53%), Gaps = 14/436 (3%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVH-GNSFTFPLVLKACANINSIWDGKRVHSHVLKV 59
M+R N+ L +Y+ ML+ + + FTFP +LK CA + GK +H V+K
Sbjct: 49 MLRAFVNSNMPRRALQSYTEMLERSRNVPDRFTFPSLLKGCALLLEFKVGKVLHGQVVKY 108
Query: 60 GFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAIL 119
D +++T L++MY+ C D S+R + + M R+ V W S+IS + + +EA+L
Sbjct: 109 MLHSDLYIETTLLNMYAACGDLKSARFLFERMG--HRNKVVWTSMISGYMKNHCPNEALL 166
Query: 120 VLKEMWVLGLELSASTFVSVVSGCSFRQ----GISMHCCVYKLGLLNNEIPLANSVMSMY 175
+ K+M G T ++VS C+ + G+ +H + ++ + + L +++++MY
Sbjct: 167 LYKKMEEDGFSPDEVTMATLVSACAELKDLGVGMKLHSHIREMDMKICAV-LGSALVNMY 225
Query: 176 AKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMS-VTPDLVVF 234
AK G + AR +FD++ + + +W+ +I GYV EA L ++ S + P+ V
Sbjct: 226 AKCGDLKTARQVFDKLSDKDVYAWSALIFGYVKNNRSTEALQLFREVAGGSNMRPNEVTI 285
Query: 235 LNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLE 294
L +I CAQ+G+L +H + ++ + L+N L+ M++KCGD++ A+R+FD++
Sbjct: 286 LAVISACAQLGDLETGRWVHDYITRTQKGHSVSLNNSLIDMFSKCGDIDAAKRIFDSMSY 345
Query: 295 KSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEI 354
K + W SM+ G+A G EA+ F+ + T ++P+E T L+AC+ G + +GK++
Sbjct: 346 KDLISWNSMVNGFALHGLGREALAQFRLMQTTDLQPDEITFIGVLTACSHAGLVQEGKKL 405
Query: 355 -EEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVP-DKDLAVWSAMINGYAIHG 412
E L G+ + ++ + + G + +A+E +P D A+W +M+ ++
Sbjct: 406 FYEIEALYGVRLKSEHYGCMVDLLCRAGLLAEAREFIRVMPLQPDGAIWGSMLGACRVYN 465
Query: 413 ---MGDQALNLFYKMQ 425
+G++A K++
Sbjct: 466 NLELGEEAARFLLKLE 481
Score = 162 bits (410), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 92/318 (28%), Positives = 174/318 (54%), Gaps = 4/318 (1%)
Query: 181 VNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQM-RRMSVTPDLVVFLNLIL 239
V A S+F E +++W +++ +VN A +M R PD F +L+
Sbjct: 28 VGYAYSVFAHTRELDVLTWNSMLRAFVNSNMPRRALQSYTEMLERSRNVPDRFTFPSLLK 87
Query: 240 GCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFL 299
GCA + + +H ++K +++ ++ L++MY CGDL+ AR +F+ + ++ +
Sbjct: 88 GCALLLEFKVGKVLHGQVVKYMLHSDLYIETTLLNMYAACGDLKSARFLFERMGHRNKVV 147
Query: 300 WTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIV 359
WTSMI GY + P+EA+ L+K++ + P+E T+AT +SACAEL L G ++ +I
Sbjct: 148 WTSMISGYMKNHCPNEALLLYKKMEEDGFSPDEVTMATLVSACAELKDLGVGMKLHSHIR 207
Query: 360 LNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALN 419
++ + ++L++M++KCG + A++VF+++ DKD+ WSA+I GY + +AL
Sbjct: 208 EMDMKICAVLGSALVNMYAKCGDLKTARQVFDKLSDKDVYAWSALIFGYVKNNRSTEALQ 267
Query: 420 LFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSM-QSNFGIEPSIEHYLCLVD 478
LF ++ ++P+ V +++SAC+ G ++ G + ++ G S+ + L+D
Sbjct: 268 LFREVAGGSNMRPNEVTILAVISACAQLGDLETGRWVHDYITRTQKGHSVSLNN--SLID 325
Query: 479 LLGRAGRFDLALKTIHEM 496
+ + G D A + M
Sbjct: 326 MFSKCGDIDAAKRIFDSM 343
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 83/345 (24%), Positives = 163/345 (47%), Gaps = 29/345 (8%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI N E L Y M + G + T ++ ACA + + G ++HSH+ ++
Sbjct: 151 MISGYMKNHCPNEALLLYKKMEEDGFSPDEVTMATLVSACAELKDLGVGMKLHSHIREMD 210
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+ A + + L++MY+KC D ++R+V D++ + V +W+++I + + + EA+ +
Sbjct: 211 MKICAVLGSALVNMYAKCGDLKTARQVFDKLSD--KDVYAWSALIFGYVKNNRSTEALQL 268
Query: 121 LKEMWVLG---LELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMS 173
+E V G + + T ++V+S C+ G +H + + + + L NS++
Sbjct: 269 FRE--VAGGSNMRPNEVTILAVISACAQLGDLETGRWVHDYITRTQ-KGHSVSLNNSLID 325
Query: 174 MYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVV 233
M++K G ++ A+ IFD + ++SW +++ G+ G EA M+ + PD +
Sbjct: 326 MFSKCGDIDAAKRIFDSMSYKDLISWNSMVNGFALHGLGREALAQFRLMQTTDLQPDEIT 385
Query: 234 FLNLILGCAQVG------NLFLAL-SMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELAR 286
F+ ++ C+ G LF + +++ + LKS + +V + + G L AR
Sbjct: 386 FIGVLTACSHAGLVQEGKKLFYEIEALYGVRLKSEHY------GCMVDLLCRAGLLAEAR 439
Query: 287 RVFDAV-LEKSVFLWTSMIGG---YAQLGYPSEAVNLFKRLLKTS 327
+ L+ +W SM+G Y L EA +L T+
Sbjct: 440 EFIRVMPLQPDGAIWGSMLGACRVYNNLELGEEAARFLLKLEPTN 484
>gi|125570322|gb|EAZ11837.1| hypothetical protein OsJ_01713 [Oryza sativa Japonica Group]
Length = 877
Score = 358 bits (918), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 196/618 (31%), Positives = 332/618 (53%), Gaps = 8/618 (1%)
Query: 7 NNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAF 66
N + + + M+ +G+ F F V+ AC +I G++VH+ V+++G+ +D F
Sbjct: 179 KNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIEAGRQVHAMVVRMGYDKDVF 238
Query: 67 VQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWV 126
L+DMY K + + ++MP VVSWN++IS + AI +L +M
Sbjct: 239 TANALVDMYMKMGRVDIASVIFEKMPDS--DVVSWNALISGCVLNGHDHRAIELLLQMKY 296
Query: 127 LGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVN 182
GL + T S++ CS F G +H + K +++ + ++ MYAK ++
Sbjct: 297 SGLVPNVFTLSSILKACSGAGAFDLGRQIHGFMIKANADSDDY-IGVGLVDMYAKNHFLD 355
Query: 183 EARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCA 242
+AR +FD + ++ +I G + G +EA L ++R+ + + ++ A
Sbjct: 356 DARKVFDWMFHRDLILCNALISGCSHGGRHDEALSLFYELRKEGLGVNRTTLAAVLKSTA 415
Query: 243 QVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTS 302
+ +H+L +K G+ + + N L+ Y KC L A RVF+ + TS
Sbjct: 416 SLEAASTTRQVHALAVKIGFIFDAHVVNGLIDSYWKCSCLSDANRVFEECSSGDIIACTS 475
Query: 303 MIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNG 362
MI +Q + A+ LF +L+ + P+ L++ L+ACA L + +GK++ +++
Sbjct: 476 MITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQ 535
Query: 363 LESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFY 422
S+ +L++ ++KCG I A+ F +P++ + WSAMI G A HG G +AL LF
Sbjct: 536 FMSDAFAGNALVYTYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALELFG 595
Query: 423 KMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGR 482
+M EG+ P+ + TS+L AC+H+G+VD+ +F SM+ FGI+ + EHY C++DLLGR
Sbjct: 596 RMVD-EGINPNHITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIDRTEEHYSCMIDLLGR 654
Query: 483 AGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILM 542
AG+ D A++ ++ MP + A +W LL A H + ELG+ AA+ L L P +G ++L+
Sbjct: 655 AGKLDDAMELVNSMPFQANASIWGALLGASRVHKDPELGKLAAEKLFILEPEKSGTHVLL 714
Query: 543 ANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTL 602
AN + SAGMW E A R LM D + KEP S +E+ V F+ GD+SH ++ +I L
Sbjct: 715 ANTYASAGMWNEVAKVRKLMKDSNIKKEPAMSWIEVKDKVHTFIVGDKSHPMTKEIYAKL 774
Query: 603 KELHIKLLEAGYIAEADI 620
EL + +AG++ D+
Sbjct: 775 VELGDLMSKAGFVPNVDV 792
Score = 205 bits (522), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 132/444 (29%), Positives = 224/444 (50%), Gaps = 10/444 (2%)
Query: 6 TNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDA 65
+NNG + + M GV N F P+VLK + G +VH+ + GF D
Sbjct: 79 SNNGLPRSAIQAFHGMRAEGVCCNEFALPVVLKCVPDARL---GAQVHAMAMATGFGSDV 135
Query: 66 FVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMW 125
FV L+ MY +R+V +E R+ VSWN ++SA+ + +AI V EM
Sbjct: 136 FVANALVAMYGGFGFMDDARRVFNEADSE-RNAVSWNGLMSAYVKNDQCGDAIQVFGEMV 194
Query: 126 VLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKV 181
G++ + F VV+ C+ G +H V ++G + ++ AN+++ MY K G+V
Sbjct: 195 WSGIQPTEFGFSCVVNACTGSRNIEAGRQVHAMVVRMG-YDKDVFTANALVDMYMKMGRV 253
Query: 182 NEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGC 241
+ A IF+++ ++ +VSW +I G V G+ + A L QM+ + P++ +++ C
Sbjct: 254 DIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKYSGLVPNVFTLSSILKAC 313
Query: 242 AQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWT 301
+ G L +H ++K+ +++D + LV MY K L+ AR+VFD + + + L
Sbjct: 314 SGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDARKVFDWMFHRDLILCN 373
Query: 302 SMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLN 361
++I G + G EA++LF L K + N TLA L + A L + S +++ V
Sbjct: 374 ALISGCSHGGRHDEALSLFYELRKEGLGVNRTTLAAVLKSTASLEAASTTRQVHALAVKI 433
Query: 362 GLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLF 421
G + V LI + KC ++ A VFE D+ ++MI + G+ A+ LF
Sbjct: 434 GFIFDAHVVNGLIDSYWKCSCLSDANRVFEECSSGDIIACTSMITALSQCDHGEGAIKLF 493
Query: 422 YKMQHVEGLKPDAVVYTSILSACS 445
+M +GL+PD V +S+L+AC+
Sbjct: 494 MEMLR-KGLEPDPFVLSSLLNACA 516
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 107/417 (25%), Positives = 201/417 (48%), Gaps = 9/417 (2%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+I NG + M +G+ N FT +LKAC+ + G+++H ++K
Sbjct: 274 LISGCVLNGHDHRAIELLLQMKYSGLVPNVFTLSSILKACSGAGAFDLGRQIHGFMIKAN 333
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
D ++ GL+DMY+K +RKV D M R ++ N++IS S +DEA+ +
Sbjct: 334 ADSDDYIGVGLVDMYAKNHFLDDARKVFDWM--FHRDLILCNALISGCSHGGRHDEALSL 391
Query: 121 LKEMWVLGLELSASTFVSVVSGCSFRQGIS----MHCCVYKLGLLNNEIPLANSVMSMYA 176
E+ GL ++ +T +V+ + + S +H K+G + + + N ++ Y
Sbjct: 392 FYELRKEGLGVNRTTLAAVLKSTASLEAASTTRQVHALAVKIGFIFDA-HVVNGLIDSYW 450
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K +++A +F+E I++ T++I + A L +M R + PD V +
Sbjct: 451 KCSCLSDANRVFEECSSGDIIACTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSS 510
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
L+ CA + +H+ L+K + ++ N LV Y KCG +E A F ++ E+
Sbjct: 511 LLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSLPERG 570
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKE-IE 355
V W++MIGG AQ G+ A+ LF R++ + PN T+ + L AC G + + K
Sbjct: 571 VVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMTSVLCACNHAGLVDEAKRYFN 630
Query: 356 EYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVP-DKDLAVWSAMINGYAIH 411
+ G++ + + +I + + G+++ A E+ +P + ++W A++ +H
Sbjct: 631 SMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQANASIWGALLGASRVH 687
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 108/407 (26%), Positives = 208/407 (51%), Gaps = 12/407 (2%)
Query: 41 ANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVS 100
A ++ G +H+ +LK G A + LI YSKC +R+ DE+P VS
Sbjct: 15 AAAQALLPGAHLHASLLKSG--SLASFRNHLISFYSKCRRPCCARRFFDEIPDPCH--VS 70
Query: 101 WNSIISAHSRACLNDEAILVLKEMWVLGL---ELSASTFVSVVSGCSFRQGISMHCCVYK 157
W+S+++A+S L AI M G+ E + + V R G +H
Sbjct: 71 WSSLVTAYSNNGLPRSAIQAFHGMRAEGVCCNEFALPVVLKCVPDA--RLGAQVHAMAMA 128
Query: 158 LGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEI-GETSIVSWTTIIGGYVNVGNVNEAF 216
G +++ +AN++++MY FG +++AR +F+E E + VSW ++ YV +A
Sbjct: 129 TGF-GSDVFVANALVAMYGGFGFMDDARRVFNEADSERNAVSWNGLMSAYVKNDQCGDAI 187
Query: 217 GLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMY 276
+ +M + P F ++ C N+ +H+++++ GY+ + N LV MY
Sbjct: 188 QVFGEMVWSGIQPTEFGFSCVVNACTGSRNIEAGRQVHAMVVRMGYDKDVFTANALVDMY 247
Query: 277 TKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLA 336
K G +++A +F+ + + V W ++I G G+ A+ L ++ + + PN TL+
Sbjct: 248 MKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKYSGLVPNVFTLS 307
Query: 337 TTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDK 396
+ L AC+ G+ G++I +++ +S+ + L+ M++K ++ A++VF+ + +
Sbjct: 308 SILKACSGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDARKVFDWMFHR 367
Query: 397 DLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSA 443
DL + +A+I+G + G D+AL+LFY+++ EGL + ++L +
Sbjct: 368 DLILCNALISGCSHGGRHDEALSLFYELRK-EGLGVNRTTLAAVLKS 413
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 91/390 (23%), Positives = 181/390 (46%), Gaps = 21/390 (5%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+I ++ G +E LS + + + G+ N T VLK+ A++ + ++VH+ +K+G
Sbjct: 375 LISGCSHGGRHDEALSLFYELRKEGLGVNRTTLAAVLKSTASLEAASTTRQVHALAVKIG 434
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F DA V GLID Y KCS + +V +E +++ S+I+A S+ + AI +
Sbjct: 435 FIFDAHVVNGLIDSYWKCSCLSDANRVFEECSS--GDIIACTSMITALSQCDHGEGAIKL 492
Query: 121 LKEMWVLGLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
EM GLE S+++ C ++ QG +H + K +++ N+++ YA
Sbjct: 493 FMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFA-GNALVYTYA 551
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K G + +A F + E +VSW+ +IGG G+ A L +M + P+ + +
Sbjct: 552 KCGSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMTS 611
Query: 237 LILGCAQVGNLFLALS-MHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAV-LE 294
++ C G + A +S+ G + + + ++ + + G L+ A + +++ +
Sbjct: 612 VLCACNHAGLVDEAKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQ 671
Query: 295 KSVFLWTSMIGGYAQLGYPS----EAVNLFKRLLKTSVRPNEATLATTLSAC------AE 344
+ +W +++G P A LF +L+ LA T ++ A+
Sbjct: 672 ANASIWGALLGASRVHKDPELGKLAAEKLF--ILEPEKSGTHVLLANTYASAGMWNEVAK 729
Query: 345 LGSLSKGKEIEEYIVLNGLESNRQVQTSLI 374
+ L K I++ ++ +E +V T ++
Sbjct: 730 VRKLMKDSNIKKEPAMSWIEVKDKVHTFIV 759
>gi|297815974|ref|XP_002875870.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297321708|gb|EFH52129.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 700
Score = 358 bits (918), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 201/609 (33%), Positives = 322/609 (52%), Gaps = 10/609 (1%)
Query: 1 MIRNSTNNGSFEETLSTYSSM--LQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLK 58
+I+ + +E + +S+M + V ++ +VLKAC ++I G+ +H++ +K
Sbjct: 71 IIKGYVTANNSDEAMILFSAMRVVDPAVSPDTSVVSVVLKACGQSSNIAYGESLHAYAVK 130
Query: 59 VGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAI 118
FV + L+DMY + S +V EMP R+ V+W +II+ A E +
Sbjct: 131 TSLLSSVFVGSSLLDMYKRVGKIEKSCRVFSEMP--FRNAVTWTAIITGLVHAGRYKEGL 188
Query: 119 LVLKEMWVLGLELSASTFVSVVSGCS-FRQ---GISMHCCVYKLGLLNNEIPLANSVMSM 174
EM TF + C+ RQ G +H V G + + +ANS+ +M
Sbjct: 189 TYFSEMSSSEELSDTFTFAIALKACAGLRQVKYGKQIHTHVIVRGF-DATVWVANSLATM 247
Query: 175 YAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVF 234
Y + G++ + +F+ + E +VSWT++I Y +G+ +A +MR V P+ F
Sbjct: 248 YTECGEMRDGLCLFENMSERDVVSWTSLIVAYNRIGHEEKAVETFIKMRNSQVPPNEQTF 307
Query: 235 LNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLE 294
+ CA + L +H + G N+ + N ++ MY+ CG L+ A +F +
Sbjct: 308 ATMFSACASLSRLVWGEQLHCNVFSLGLNDSLSVSNSMMKMYSTCGKLDSASVLFQGMRC 367
Query: 295 KSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEI 354
+ + W+++IGGY+Q G+ EA F + ++ +P + LA+ LS + L G+++
Sbjct: 368 RDIISWSTIIGGYSQAGFGEEAFKYFSWMRQSGPKPTDFALASLLSVSGNMAVLEGGRQV 427
Query: 355 EEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMG 414
GLE N V+++LI+M+SKCG I +A ++FE D+ +AMINGYA HG
Sbjct: 428 HALAFCFGLEQNSTVRSTLINMYSKCGNIKEASKIFEETDRDDIVSLTAMINGYAEHGKS 487
Query: 415 DQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYL 474
+A++LF K V G PD+V + S+L+AC+HSG +D G +F MQ + + P+ EHY
Sbjct: 488 KEAIDLFEKSLKV-GFSPDSVTFISVLTACTHSGQLDLGFHYFNLMQEKYNMRPAKEHYG 546
Query: 475 CLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPG 534
C+VDLL RAGR A K I EM + VW LL AC ++E G AA+ +L L+P
Sbjct: 547 CMVDLLCRAGRLSEAEKMIDEMSWKKDDVVWTTLLIACKAKGDIERGRRAAERILELDPT 606
Query: 535 STGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHL 594
+ +AN+++S G +EAA R M + + KEPGWS ++I V FV+GDR H L
Sbjct: 607 CATALVTLANIYSSTGNLEEAANVRKNMKAKGVIKEPGWSSIKIKDCVSAFVSGDRFHPL 666
Query: 595 SVDIRKTLK 603
S DI L+
Sbjct: 667 SEDIYNILE 675
Score = 186 bits (473), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 120/418 (28%), Positives = 213/418 (50%), Gaps = 11/418 (2%)
Query: 84 SRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFV--SVVS 141
+R+V D+MP R +VSW +II + A +DEA+++ M V+ +S T V V+
Sbjct: 53 ARQVFDKMP--HRDIVSWTAIIKGYVTANNSDEAMILFSAMRVVDPAVSPDTSVVSVVLK 110
Query: 142 GC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIV 197
C + G S+H K LL++ + + +S++ MY + GK+ ++ +F E+ + V
Sbjct: 111 ACGQSSNIAYGESLHAYAVKTSLLSS-VFVGSSLLDMYKRVGKIEKSCRVFSEMPFRNAV 169
Query: 198 SWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLL 257
+WT II G V+ G E ++M D F + CA + + +H+ +
Sbjct: 170 TWTAIITGLVHAGRYKEGLTYFSEMSSSEELSDTFTFAIALKACAGLRQVKYGKQIHTHV 229
Query: 258 LKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAV 317
+ G++ + N L +MYT+CG++ +F+ + E+ V WTS+I Y ++G+ +AV
Sbjct: 230 IVRGFDATVWVANSLATMYTECGEMRDGLCLFENMSERDVVSWTSLIVAYNRIGHEEKAV 289
Query: 318 NLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMF 377
F ++ + V PNE T AT SACA L L G+++ + GL + V S++ M+
Sbjct: 290 ETFIKMRNSQVPPNEQTFATMFSACASLSRLVWGEQLHCNVFSLGLNDSLSVSNSMMKMY 349
Query: 378 SKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVY 437
S CG+++ A +F+ + +D+ WS +I GY+ G G++A F M+ G KP
Sbjct: 350 STCGKLDSASVLFQGMRCRDIISWSTIIGGYSQAGFGEEAFKYFSWMRQ-SGPKPTDFAL 408
Query: 438 TSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHE 495
S+LS + +++ G ++ FG+E + L+++ + G A K E
Sbjct: 409 ASLLSVSGNMAVLEGGRQ-VHALAFCFGLEQNSTVRSTLINMYSKCGNIKEASKIFEE 465
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 78/269 (28%), Positives = 142/269 (52%), Gaps = 3/269 (1%)
Query: 179 GKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRM--SVTPDLVVFLN 236
G + AR +FD++ IVSWT II GYV N +EA L + MR + +V+PD V
Sbjct: 48 GNLRVARQVFDKMPHRDIVSWTAIIKGYVTANNSDEAMILFSAMRVVDPAVSPDTSVVSV 107
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
++ C Q N+ S+H+ +K+ + + + L+ MY + G +E + RVF + ++
Sbjct: 108 VLKACGQSSNIAYGESLHAYAVKTSLLSSVFVGSSLLDMYKRVGKIEKSCRVFSEMPFRN 167
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEE 356
WT++I G G E + F + + + T A L ACA L + GK+I
Sbjct: 168 AVTWTAIITGLVHAGRYKEGLTYFSEMSSSEELSDTFTFAIALKACAGLRQVKYGKQIHT 227
Query: 357 YIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQ 416
++++ G ++ V SL M+++CG + +FE + ++D+ W+++I Y G ++
Sbjct: 228 HVIVRGFDATVWVANSLATMYTECGEMRDGLCLFENMSERDVVSWTSLIVAYNRIGHEEK 287
Query: 417 ALNLFYKMQHVEGLKPDAVVYTSILSACS 445
A+ F KM++ + + P+ + ++ SAC+
Sbjct: 288 AVETFIKMRNSQ-VPPNEQTFATMFSACA 315
>gi|255541924|ref|XP_002512026.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223549206|gb|EEF50695.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 810
Score = 358 bits (918), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 202/621 (32%), Positives = 338/621 (54%), Gaps = 11/621 (1%)
Query: 1 MIRNSTNNGSFEETLSTYSSML--QTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLK 58
+I + NG ++ M+ + G+ + T VL CA + G R+H +K
Sbjct: 103 IISGFSENGFSKDCFDMLVEMMAGEEGLLPDIATLVTVLPVCAREVDVQMGIRIHGLAVK 162
Query: 59 VGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAI 118
+G +D V L+DMYSKC ++ + D+ ++ VSWN++I EA
Sbjct: 163 LGLSEDVRVNNSLVDMYSKCGYLTEAQMLFDKN--NRKNAVSWNTMIGGLCTKGYIFEAF 220
Query: 119 LVLKEMWVL-GLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMS 173
+ +EM + +E++ T ++++ C R +H + G +E+ +AN ++
Sbjct: 221 NLFREMQMQEDIEVNEVTVLNILPACLEISQLRSLKELHGYSIRHGFQYDEL-VANGFVA 279
Query: 174 MYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVV 233
YAK G + A +F + ++ SW +IGG G+ +A L QM + PD
Sbjct: 280 AYAKCGMLICAERVFYSMETKTVNSWNALIGGCAQNGDPRKALNLYIQMTYSGLVPDWFT 339
Query: 234 FLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVL 293
+L+L A + +L +H +L+ G + + L+S+Y CG+ AR +FD +
Sbjct: 340 IGSLLLASAHLKSLRYGKEVHGFVLRHGLEIDSFIGISLLSLYIHCGESSSARLLFDGME 399
Query: 294 EKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKE 353
EKS W +MI GY+Q G P +A+ LF++L+ +P++ + + L AC++ +L GKE
Sbjct: 400 EKSSVSWNAMISGYSQNGLPEDALILFRKLVSDGFQPSDIAVVSVLGACSQQSALRLGKE 459
Query: 354 IEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGM 413
Y + L + V S I M++K G I +++ VF+ + +KDLA W+A+I Y +HG
Sbjct: 460 THCYALKALLMEDVFVACSTIDMYAKSGCIKESRSVFDGLKNKDLASWNAIIAAYGVHGD 519
Query: 414 GDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHY 473
G++++ LF +M+ V G PD + IL+ CSH+G+V++GL +F MQ+ GIEP +EHY
Sbjct: 520 GEESIELFERMRKV-GQMPDGFTFIGILTVCSHAGLVEEGLKYFNEMQNFHGIEPKLEHY 578
Query: 474 LCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNP 533
C++D+LGRAGR D AL+ +HEMP + ++VW+ LLS C +E+G+ A+ LL L P
Sbjct: 579 ACVMDMLGRAGRLDDALRLVHEMPEQPDSRVWSSLLSFCRNFGELEIGQIVAEKLLELEP 638
Query: 534 GSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHH 593
+ NY+ ++NL+ +G W + R ++ D L K+ G S +E+ G V FVAGD
Sbjct: 639 KNVENYVSLSNLYAGSGRWDDVRRVRQMIKDIGLQKDAGCSWIELGGKVHSFVAGDNLLP 698
Query: 594 LSVDIRKTLKELHIKLLEAGY 614
S ++ T ++L K+ + GY
Sbjct: 699 QSKEMSMTWRKLEKKMCKIGY 719
Score = 238 bits (607), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 147/431 (34%), Positives = 241/431 (55%), Gaps = 11/431 (2%)
Query: 23 QTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFV 82
T + ++FTFP V+KAC G+ +H V+K+G D FV LI MY K
Sbjct: 24 DTEFNADNFTFPCVIKACTGSLDRGLGEVIHGMVIKMGLLLDVFVGNALIAMYGKFGFVD 83
Query: 83 SSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWV--LGLELSASTFVSVV 140
++ KV MPV R++VSWNSIIS S + + +L EM GL +T V+V+
Sbjct: 84 AAVKVFHYMPV--RNLVSWNSIISGFSENGFSKDCFDMLVEMMAGEEGLLPDIATLVTVL 141
Query: 141 SGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSI 196
C+ + GI +H KLG L+ ++ + NS++ MY+K G + EA+ +FD+ +
Sbjct: 142 PVCAREVDVQMGIRIHGLAVKLG-LSEDVRVNNSLVDMYSKCGYLTEAQMLFDKNNRKNA 200
Query: 197 VSWTTIIGGYVNVGNVNEAFGLCNQMR-RMSVTPDLVVFLNLILGCAQVGNLFLALSMHS 255
VSW T+IGG G + EAF L +M+ + + + V LN++ C ++ L +H
Sbjct: 201 VSWNTMIGGLCTKGYIFEAFNLFREMQMQEDIEVNEVTVLNILPACLEISQLRSLKELHG 260
Query: 256 LLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSE 315
++ G+ ++ + N V+ Y KCG L A RVF ++ K+V W ++IGG AQ G P +
Sbjct: 261 YSIRHGFQYDELVANGFVAAYAKCGMLICAERVFYSMETKTVNSWNALIGGCAQNGDPRK 320
Query: 316 AVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIH 375
A+NL+ ++ + + P+ T+ + L A A L SL GKE+ +++ +GLE + + SL+
Sbjct: 321 ALNLYIQMTYSGLVPDWFTIGSLLLASAHLKSLRYGKEVHGFVLRHGLEIDSFIGISLLS 380
Query: 376 MFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAV 435
++ CG + A+ +F+ + +K W+AMI+GY+ +G+ + AL LF K+ +G +P +
Sbjct: 381 LYIHCGESSSARLLFDGMEEKSSVSWNAMISGYSQNGLPEDALILFRKLVS-DGFQPSDI 439
Query: 436 VYTSILSACSH 446
S+L ACS
Sbjct: 440 AVVSVLGACSQ 450
>gi|242076488|ref|XP_002448180.1| hypothetical protein SORBIDRAFT_06g022530 [Sorghum bicolor]
gi|241939363|gb|EES12508.1| hypothetical protein SORBIDRAFT_06g022530 [Sorghum bicolor]
Length = 1029
Score = 358 bits (918), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 205/627 (32%), Positives = 336/627 (53%), Gaps = 11/627 (1%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
M+ N EET+ + M + + + FTF VL AC N++S+ G++VH +K
Sbjct: 399 MLYGFVQNDLQEETIQMFQYMRRADLEADDFTFVSVLGACINLDSLDIGRQVHCITIKNS 458
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
D FV ++DMYSK ++ + +P + VSWN++I + +EA+ +
Sbjct: 459 MDADLFVANAMLDMYSKLGAIDVAKALFSLIPGK--DSVSWNALIVGLAHNEEEEEAVYM 516
Query: 121 LKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
LK M G+ +F + ++ CS G +HC K + +N + +S++ +Y+
Sbjct: 517 LKRMKCYGIAPDEVSFATAINACSNIRATETGKQIHCASIKYNVCSNH-AVGSSLIDLYS 575
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
KFG V +R + + +S+V +I G V +EA L Q+ + P F +
Sbjct: 576 KFGDVESSRKVLAHVDASSMVPINALITGLVQNNREDEAIELFQQVLKDGFKPSNFTFAS 635
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNED-PLDNLLVSMYTKCGDLELARRVFDAVLE- 294
++ GC + + +HS LKS N+D L LV +Y KC LE A ++ V +
Sbjct: 636 ILSGCTGPVSSVIGKQVHSYTLKSALLNQDTSLGISLVGIYLKCKLLEDANKLLAEVPDH 695
Query: 295 KSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEI 354
K++ WT+ I GYAQ GY +++ +F R+ VR +EAT A+ L AC+E+ +L+ GKEI
Sbjct: 696 KNLVEWTATISGYAQNGYSDQSLVMFWRMRSHDVRSDEATFASVLKACSEIAALTDGKEI 755
Query: 355 EEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDK-DLAVWSAMINGYAIHGM 413
I+ +G S ++L+ M+SKCG + + E+F+ + +K ++ W++MI G+A +G
Sbjct: 756 HGLIIKSGFVSYETAASALMDMYSKCGDVISSFEIFKELKNKQNIMPWNSMIVGFAKNGY 815
Query: 414 GDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHY 473
++AL LF KMQ + LKPD V +L ACSH+G++ +G + F SM +GI P ++HY
Sbjct: 816 ANEALLLFQKMQESQ-LKPDEVTLLGVLIACSHAGLISEGRNLFDSMSQVYGIVPRVDHY 874
Query: 474 LCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNP 533
CL+DLLGR G A + I ++P +WA L+AC H + E G+ AAK L+ + P
Sbjct: 875 ACLIDLLGRGGHLQEAQEVIDQLPFRADGVIWATFLAACQMHKDEERGKVAAKKLVEMEP 934
Query: 534 GSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHH 593
+ Y+ +++L +AG W EA AR M ++ + K PG S + + +FV D H
Sbjct: 935 QRSSTYVFLSSLHAAAGNWVEAKVAREAMREKGVMKFPGCSWITVGNKTNLFVVQDTHHP 994
Query: 594 LSVDIRKTLKELHIKLLEAGYIAEADI 620
++ I K L +L + + I E D+
Sbjct: 995 DTLGIYKMLDDLTGMMNKDDRIEEYDL 1021
Score = 201 bits (511), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 129/459 (28%), Positives = 232/459 (50%), Gaps = 10/459 (2%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+I + + +G E Y M + G+ TF +L A A++ + +G+++H+ +K G
Sbjct: 298 VISSYSQSGLESEVFGLYKDMKRQGLMPTRSTFASMLSAAASMTAFDEGQQIHAAAVKHG 357
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+ FV + LI++Y K ++KV D +++V WN+++ + L +E I +
Sbjct: 358 LDANVFVGSSLINLYVKHGCISDAKKVFDFSTE--KNIVMWNAMLYGFVQNDLQEETIQM 415
Query: 121 LKEMWVLGLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
+ M LE TFVSV+ C S G +HC K ++ ++ +AN+++ MY+
Sbjct: 416 FQYMRRADLEADDFTFVSVLGACINLDSLDIGRQVHCITIK-NSMDADLFVANAMLDMYS 474
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K G ++ A+++F I VSW +I G + EA + +M+ + PD V F
Sbjct: 475 KLGAIDVAKALFSLIPGKDSVSWNALIVGLAHNEEEEEAVYMLKRMKCYGIAPDEVSFAT 534
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
I C+ + +H +K + + + L+ +Y+K GD+E +R+V V S
Sbjct: 535 AINACSNIRATETGKQIHCASIKYNVCSNHAVGSSLIDLYSKFGDVESSRKVLAHVDASS 594
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEE 356
+ ++I G Q EA+ LF+++LK +P+ T A+ LS C S GK++
Sbjct: 595 MVPINALITGLVQNNREDEAIELFQQVLKDGFKPSNFTFASILSGCTGPVSSVIGKQVHS 654
Query: 357 YIVLNG-LESNRQVQTSLIHMFSKCGRINKAKEVFERVPD-KDLAVWSAMINGYAIHGMG 414
Y + + L + + SL+ ++ KC + A ++ VPD K+L W+A I+GYA +G
Sbjct: 655 YTLKSALLNQDTSLGISLVGIYLKCKLLEDANKLLAEVPDHKNLVEWTATISGYAQNGYS 714
Query: 415 DQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDG 453
DQ+L +F++M+ ++ D + S+L ACS + DG
Sbjct: 715 DQSLVMFWRMRS-HDVRSDEATFASVLKACSEIAALTDG 752
Score = 198 bits (504), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 115/449 (25%), Positives = 218/449 (48%), Gaps = 36/449 (8%)
Query: 6 TNNGSFEETLSTYSSM-LQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQD 64
+GS + L + + G + F +VL AC+ + ++ G++VH VLK GF
Sbjct: 135 ARSGSPRDVLDAFQRLRCSIGGTPDQFGLAVVLSACSRLGALEQGRQVHCDVLKSGFCSS 194
Query: 65 AFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEM 124
AF Q GL+DMY+KC + +R+V D + + W S+I+ + R +A+ + M
Sbjct: 195 AFCQAGLVDMYAKCVEVKDARRVFD--GIACPDTICWASMIAGYHRVGRYQQALALFSRM 252
Query: 125 WVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEA 184
+G T+V+++ S A G++++A
Sbjct: 253 EKMGSAPDQVTYVTII--------------------------------STLASMGRLSDA 280
Query: 185 RSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQV 244
R++ I S V+W +I Y G +E FGL M+R + P F +++ A +
Sbjct: 281 RTLLKRIQMPSTVAWNAVISSYSQSGLESEVFGLYKDMKRQGLMPTRSTFASMLSAAASM 340
Query: 245 GNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMI 304
+H+ +K G + + + L+++Y K G + A++VFD EK++ +W +M+
Sbjct: 341 TAFDEGQQIHAAAVKHGLDANVFVGSSLINLYVKHGCISDAKKVFDFSTEKNIVMWNAML 400
Query: 305 GGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLE 364
G+ Q E + +F+ + + + ++ T + L AC L SL G+++ + N ++
Sbjct: 401 YGFVQNDLQEETIQMFQYMRRADLEADDFTFVSVLGACINLDSLDIGRQVHCITIKNSMD 460
Query: 365 SNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKM 424
++ V +++ M+SK G I+ AK +F +P KD W+A+I G A + ++A+ + +M
Sbjct: 461 ADLFVANAMLDMYSKLGAIDVAKALFSLIPGKDSVSWNALIVGLAHNEEEEEAVYMLKRM 520
Query: 425 QHVEGLKPDAVVYTSILSACSHSGMVDDG 453
+ G+ PD V + + ++ACS+ + G
Sbjct: 521 K-CYGIAPDEVSFATAINACSNIRATETG 548
Score = 172 bits (436), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 107/396 (27%), Positives = 205/396 (51%), Gaps = 8/396 (2%)
Query: 54 SHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACL 113
S + K+G D +I + +R +L +++ S V+WN++IS++S++ L
Sbjct: 250 SRMEKMGSAPDQVTYVTIISTLASMGRLSDARTLLKR--IQMPSTVAWNAVISSYSQSGL 307
Query: 114 NDEAILVLKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLAN 169
E + K+M GL + STF S++S + F +G +H K GL N + + +
Sbjct: 308 ESEVFGLYKDMKRQGLMPTRSTFASMLSAAASMTAFDEGQQIHAAAVKHGLDAN-VFVGS 366
Query: 170 SVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTP 229
S++++Y K G +++A+ +FD E +IV W ++ G+V E + MRR +
Sbjct: 367 SLINLYVKHGCISDAKKVFDFSTEKNIVMWNAMLYGFVQNDLQEETIQMFQYMRRADLEA 426
Query: 230 DLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVF 289
D F++++ C + +L + +H + +K+ + + + N ++ MY+K G +++A+ +F
Sbjct: 427 DDFTFVSVLGACINLDSLDIGRQVHCITIKNSMDADLFVANAMLDMYSKLGAIDVAKALF 486
Query: 290 DAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLS 349
+ K W ++I G A EAV + KR+ + P+E + AT ++AC+ + +
Sbjct: 487 SLIPGKDSVSWNALIVGLAHNEEEEEAVYMLKRMKCYGIAPDEVSFATAINACSNIRATE 546
Query: 350 KGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYA 409
GK+I + + SN V +SLI ++SK G + +++V V + +A+I G
Sbjct: 547 TGKQIHCASIKYNVCSNHAVGSSLIDLYSKFGDVESSRKVLAHVDASSMVPINALITGLV 606
Query: 410 IHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACS 445
+ D+A+ LF ++ +G KP + SILS C+
Sbjct: 607 QNNREDEAIELFQQVLK-DGFKPSNFTFASILSGCT 641
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 113/456 (24%), Positives = 212/456 (46%), Gaps = 53/456 (11%)
Query: 52 VHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRA 111
+H+ VL++G + L+D+Y + + + L S + +S++S H+R+
Sbjct: 78 LHARVLRLGLPLRGRLGDALVDLYGRSGRVGYAWRALGCCTGAPASGAAASSVLSCHARS 137
Query: 112 CLNDEAILVLKEMWV-LGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIP 166
+ + + + +G V+S CS QG +HC V K G ++
Sbjct: 138 GSPRDVLDAFQRLRCSIGGTPDQFGLAVVLSACSRLGALEQGRQVHCDVLKSGFCSSAFC 197
Query: 167 LANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMS 226
A ++ MYAK +V +AR +FD I + W ++I GY VG +A L ++M +M
Sbjct: 198 QAG-LVDMYAKCVEVKDARRVFDGIACPDTICWASMIAGYHRVGRYQQALALFSRMEKMG 256
Query: 227 VTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELAR 286
PD V ++ +I + L SM G L AR
Sbjct: 257 SAPDQVTYVTII-------------------------------STLASM----GRLSDAR 281
Query: 287 RVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELG 346
+ + S W ++I Y+Q G SE L+K + + + P +T A+ LSA A +
Sbjct: 282 TLLKRIQMPSTVAWNAVISSYSQSGLESEVFGLYKDMKRQGLMPTRSTFASMLSAAASMT 341
Query: 347 SLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMIN 406
+ +G++I V +GL++N V +SLI+++ K G I+ AK+VF+ +K++ +W+AM+
Sbjct: 342 AFDEGQQIHAAAVKHGLDANVFVGSSLINLYVKHGCISDAKKVFDFSTEKNIVMWNAMLY 401
Query: 407 GYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDG-----LSFFKSMQ 461
G+ + + ++ + +F M+ + L+ D + S+L AC + +D G ++ SM
Sbjct: 402 GFVQNDLQEETIQMFQYMRRAD-LEADDFTFVSVLGACINLDSLDIGRQVHCITIKNSMD 460
Query: 462 SNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMP 497
++ + + ++D+ + G D+A +P
Sbjct: 461 ADLFVANA------MLDMYSKLGAIDVAKALFSLIP 490
>gi|297820538|ref|XP_002878152.1| hypothetical protein ARALYDRAFT_486188 [Arabidopsis lyrata subsp.
lyrata]
gi|297323990|gb|EFH54411.1| hypothetical protein ARALYDRAFT_486188 [Arabidopsis lyrata subsp.
lyrata]
Length = 886
Score = 358 bits (918), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 205/634 (32%), Positives = 351/634 (55%), Gaps = 30/634 (4%)
Query: 11 FEETLSTYSSMLQTGVHGNSFTFPLVLKACANI---NSIWDGKRVHSHVLKVGFQQDAFV 67
+E L + ML V +SFT V AC+N + GK+VH++ L+ G + ++F+
Sbjct: 176 WEMALEAFRCMLDEDVEPSSFTLVSVALACSNFPMPEGLLMGKQVHAYGLRKG-ELNSFI 234
Query: 68 QTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLND---EAILVLKEM 124
L+ MY K SS+ +L R +V+WN+++S+ C N+ EA+ L+EM
Sbjct: 235 INTLVAMYGKMGKLASSKVLLGSF--EGRDLVTWNTVLSS---LCQNEQFLEALEYLREM 289
Query: 125 WVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGK 180
+ G+E T SV+ CS R G +H K G L+ + ++++ MY +
Sbjct: 290 VLEGVEPDGFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQ 349
Query: 181 VNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMS-VTPDLVVFLNLIL 239
V +FD + + I W +I GY EA L +M + + + ++
Sbjct: 350 VLSGCRVFDGMFDRKIGLWNAMITGYAQNEYDEEALLLFIEMEESAGLLANSTTMAGVVP 409
Query: 240 GCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFL 299
C + G ++H ++K G + + + N L+ MY++ G +++A+R+F + ++ +
Sbjct: 410 ACVRSGAFSKKEAIHGFVVKRGLDRDRFVQNALMDMYSRLGKIDIAKRIFGKMEDRDLVT 469
Query: 300 WTSMIGGYAQLGYPSEAVNLF-----------KRLLKTSVRPNEATLATTLSACAELGSL 348
W ++I GY +A+ + +R + S++PN TL T L +CA L +L
Sbjct: 470 WNTIITGYVFSERHEDALLMLHKMQILERKASERASRVSLKPNSITLMTILPSCAALSAL 529
Query: 349 SKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGY 408
+KGKEI Y + N L ++ V ++L+ M++KCG + +++VF+++P +++ W+ ++ Y
Sbjct: 530 AKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPIRNVITWNVIVMAY 589
Query: 409 AIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEP 468
+HG A+++ +M V+G+KP+ V + S+ +ACSHSGMV++GL F +M+ ++G+EP
Sbjct: 590 GMHGNSQDAIDML-RMMMVQGVKPNEVTFISVFAACSHSGMVNEGLKIFYNMKKDYGVEP 648
Query: 469 SIEHYLCLVDLLGRAGRFDLALKTIHEMPVEV-QAQVWAPLLSACMKHHNVELGEYAAKN 527
S +HY C+VDLLGRAGR A + I+ +P +A W+ LL AC H+N+E+GE AA+N
Sbjct: 649 SSDHYACVVDLLGRAGRVKEAYQLINLIPRNFDKAGAWSSLLGACRIHNNLEIGEIAAQN 708
Query: 528 LLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVA 587
L+ L P +Y+L+AN+++SAG+W +A R M + + KEPG S +E V FVA
Sbjct: 709 LIQLEPNVASHYVLLANIYSSAGLWYKATEVRRNMKAQGVRKEPGCSWIEHGDEVHKFVA 768
Query: 588 GDRSHHLSVDIRKTLKELHIKLLEAGYIAEADIV 621
GD SH S +R L+ L ++ + GYI + V
Sbjct: 769 GDSSHPQSEKLRGYLETLWERMRKEGYIPDTSCV 802
Score = 234 bits (596), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 153/538 (28%), Positives = 274/538 (50%), Gaps = 24/538 (4%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
++R+ + E + TY M+ G+ ++F FP +LKA A++ + GK++H+HV K G
Sbjct: 64 LLRSKVRSNLLREAVLTYIDMIVLGIKPDNFAFPALLKAVADLQDMDLGKQIHAHVYKFG 123
Query: 61 FQQDAF-VQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAIL 119
+ D+ V L+++Y KC DF + KV D + R+ VSWNS+IS+ + A+
Sbjct: 124 YGVDSVTVANTLVNLYRKCGDFGAVYKVFDR--ISERNQVSWNSLISSLCSFEKWEMALE 181
Query: 120 VLKEMWVLGLELSASTFVSVVSGCS---FRQGISMHCCVYKLGLLNNEIP--LANSVMSM 174
+ M +E S+ T VSV CS +G+ M V+ GL E+ + N++++M
Sbjct: 182 AFRCMLDEDVEPSSFTLVSVALACSNFPMPEGLLMGKQVHAYGLRKGELNSFIINTLVAM 241
Query: 175 YAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVF 234
Y K GK+ ++ + +V+W T++ EA +M V PD
Sbjct: 242 YGKMGKLASSKVLLGSFEGRDLVTWNTVLSSLCQNEQFLEALEYLREMVLEGVEPDGFTI 301
Query: 235 LNLILGCAQVGNLFLALSMHSLLLKSGYNNEDP-LDNLLVSMYTKCGDLELARRVFDAVL 293
+++ C+ + L +H+ LK+G +E+ + + LV MY C + RVFD +
Sbjct: 302 SSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGCRVFDGMF 361
Query: 294 EKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTS-VRPNEATLATTLSACAELGSLSKGK 352
++ + LW +MI GYAQ Y EA+ LF + +++ + N T+A + AC G+ SK +
Sbjct: 362 DRKIGLWNAMITGYAQNEYDEEALLLFIEMEESAGLLANSTTMAGVVPACVRSGAFSKKE 421
Query: 353 EIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHG 412
I ++V GL+ +R VQ +L+ M+S+ G+I+ AK +F ++ D+DL W+ +I GY
Sbjct: 422 AIHGFVVKRGLDRDRFVQNALMDMYSRLGKIDIAKRIFGKMEDRDLVTWNTIITGYVFSE 481
Query: 413 MGDQALNLFYKMQHVE----------GLKPDAVVYTSILSACSHSGMVDDGLSFFK-SMQ 461
+ AL + +KMQ +E LKP+++ +IL +C+ + G +++
Sbjct: 482 RHEDALLMLHKMQILERKASERASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIK 541
Query: 462 SNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVE 519
+N + ++ LVD+ + G ++ K ++P+ W ++ A H N +
Sbjct: 542 NNLATDVAVGS--ALVDMYAKCGCLQMSRKVFDQIPIR-NVITWNVIVMAYGMHGNSQ 596
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 103/409 (25%), Positives = 193/409 (47%), Gaps = 20/409 (4%)
Query: 101 WNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCSFRQ----GISMHCCVY 156
W ++ + R+ L EA+L +M VLG++ F +++ + Q G +H VY
Sbjct: 61 WIDLLRSKVRSNLLREAVLTYIDMIVLGIKPDNFAFPALLKAVADLQDMDLGKQIHAHVY 120
Query: 157 KLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAF 216
K G + + +AN+++++Y K G +FD I E + VSW ++I + A
Sbjct: 121 KFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMAL 180
Query: 217 GLCNQMRRMSVTPDLVVFLNLILGCAQVG---NLFLALSMHSLLLKSGYNNEDPLDNLLV 273
M V P +++ L C+ L + +H+ L+ G N + N LV
Sbjct: 181 EAFRCMLDEDVEPSSFTLVSVALACSNFPMPEGLLMGKQVHAYGLRKGELNSFII-NTLV 239
Query: 274 SMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEA 333
+MY K G L ++ + + + + W +++ Q EA+ + ++ V P+
Sbjct: 240 AMYGKMGKLASSKVLLGSFEGRDLVTWNTVLSSLCQNEQFLEALEYLREMVLEGVEPDGF 299
Query: 334 TLATTLSACAELGSLSKGKEIEEYIVLNG-LESNRQVQTSLIHMFSKCGRINKAKEVFER 392
T+++ L AC+ L L GKE+ Y + NG L+ N V ++L+ M+ C ++ VF+
Sbjct: 300 TISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGCRVFDG 359
Query: 393 VPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDD 452
+ D+ + +W+AMI GYA + ++AL LF +M+ GL ++ ++ AC SG
Sbjct: 360 MFDRKIGLWNAMITGYAQNEYDEEALLLFIEMEESAGLLANSTTMAGVVPACVRSGAFSK 419
Query: 453 -----GLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEM 496
G + + + ++ + L+D+ R G+ D+A + +M
Sbjct: 420 KEAIHGFVVKRGLDRDRFVQNA------LMDMYSRLGKIDIAKRIFGKM 462
>gi|225441321|ref|XP_002274344.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Vitis vinifera]
Length = 739
Score = 358 bits (918), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 207/610 (33%), Positives = 337/610 (55%), Gaps = 17/610 (2%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANIN-SIWDGKRVHSHVLKV 59
+I++ ++G F L Y M + GV +SFTFP++ +A ++ + G+ VH +K+
Sbjct: 120 IIKSHVDSGLFGYALLQYGRMRELGVAHDSFTFPIINQAIWSLGCRVEYGETVHCVAMKM 179
Query: 60 GFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAIL 119
GF QD + ++++Y KC ++ K+ DEM R +VSW SIIS +
Sbjct: 180 GFGQDVYFGNTMLEVYVKCGSIGNASKLFDEMT--HRDLVSWTSIISGYIYGESFSRGFK 237
Query: 120 VLKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMY 175
+ +M + +E ++ T V ++ CS +G +H V K G + + + NS++ MY
Sbjct: 238 LFNKM-RMEMEPNSVTMVVMLQACSAFESVNEGRELHSYVIKKGFMVDR-SVQNSILRMY 295
Query: 176 AKFGKV-NEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVF 234
K G E + F EI E I+SW +I Y G++ E N+MRR VT +
Sbjct: 296 TKTGGSGEEVETFFSEIEERDIISWNILIAFYSFRGDIAEVAERFNEMRR-EVTSSIESL 354
Query: 235 LNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLE 294
++ A NL +H +K+G ++ L L+++Y KCG LE++ ++F +
Sbjct: 355 TLVVSAIANCANLSEGGMLHCSAIKTGLHD-TVLMTCLLALYAKCGALEISAQLFRDIPH 413
Query: 295 KSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEI 354
++ W+SM+ G+ Q G+ EA+ L++++L + ++PN ++T + A LG+L GK
Sbjct: 414 RNSITWSSMMSGFTQNGFFKEAIELYQQMLASGLQPNHDIISTLVIAYTHLGALQLGKAT 473
Query: 355 EEYIVLN----GLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAI 410
+ + N E + ++TSL++M+ +CG I+ A F RV KD+ W++MI G+
Sbjct: 474 HAFFIRNLSSWPEEDSAPLETSLLNMYIRCGSISSALICFNRVVVKDVVTWTSMIEGFGT 533
Query: 411 HGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSI 470
HG+ +AL F M E ++P++V + S+LSACSHSG+V +G F SM+ F IEP +
Sbjct: 534 HGLAFEALKFFKSMLESE-VQPNSVTFLSLLSACSHSGLVREGCEVFHSMKWGFRIEPDL 592
Query: 471 EHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLT 530
HY C+VDLLGR+G+ AL I ++ +++W LL+A H + +LGEYAA+ LL
Sbjct: 593 NHYTCMVDLLGRSGKLKEALTVILKLVTCPDSRIWGALLAASRVHEDKKLGEYAAEKLLE 652
Query: 531 LNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDR 590
L P + G Y L +N+ S W E R +M +R L K+PGWS +E+ G + FV+GD
Sbjct: 653 LEPDNVGYYTLWSNIEASLERWGEVEEVRRVMHERDLKKKPGWSCIEVKGMIHGFVSGDT 712
Query: 591 SHHLSVDIRK 600
SHH +I K
Sbjct: 713 SHHQVEEICK 722
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 138/517 (26%), Positives = 256/517 (49%), Gaps = 32/517 (6%)
Query: 17 TYSSMLQTGVHGNS------FTFPLVLKACANINSIWDGKRVH-SHVLKVGFQQDAFVQT 69
++SS+L H NS F + +L +C N+ ++ KR+H S ++ GFQ + V +
Sbjct: 32 SFSSVLFRTHHLNSHYLTCSFPYSSLLHSCNNLQAL---KRIHASLIVSSGFQPLS-VAS 87
Query: 70 GLIDMYSKCSDFVSSRKVLD--EMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVL 127
LI +YS+ +DF S+ + + E P + V WNSII +H + L A+L M L
Sbjct: 88 KLITLYSQLNDFRSAFSICNSFEEP----NTVIWNSIIKSHVDSGLFGYALLQYGRMREL 143
Query: 128 GLELSASTFVSVVS-----GCSFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVN 182
G+ + TF + GC G ++HC K+G ++ N+++ +Y K G +
Sbjct: 144 GVAHDSFTFPIINQAIWSLGCRVEYGETVHCVAMKMG-FGQDVYFGNTMLEVYVKCGSIG 202
Query: 183 EARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCA 242
A +FDE+ +VSWT+II GY+ + + F L N+M RM + P+ V + ++ C+
Sbjct: 203 NASKLFDEMTHRDLVSWTSIISGYIYGESFSRGFKLFNKM-RMEMEPNSVTMVVMLQACS 261
Query: 243 QVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDL-ELARRVFDAVLEKSVFLWT 301
++ +HS ++K G+ + + N ++ MYTK G E F + E+ + W
Sbjct: 262 AFESVNEGRELHSYVIKKGFMVDRSVQNSILRMYTKTGGSGEEVETFFSEIEERDIISWN 321
Query: 302 SMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLN 361
+I Y+ G +E F ++ V + +L +SA A +LS+G + +
Sbjct: 322 ILIAFYSFRGDIAEVAERFNE-MRREVTSSIESLTLVVSAIANCANLSEGGMLHCSAIKT 380
Query: 362 GLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLF 421
GL + + T L+ +++KCG + + ++F +P ++ WS+M++G+ +G +A+ L+
Sbjct: 381 GLH-DTVLMTCLLALYAKCGALEISAQLFRDIPHRNSITWSSMMSGFTQNGFFKEAIELY 439
Query: 422 YKMQHVEGLKPDAVVYTSILSACSHSGMVDDGL---SFFKSMQSNFGIEPSIEHYLCLVD 478
+M GL+P+ + ++++ A +H G + G +FF S++ E S L++
Sbjct: 440 QQML-ASGLQPNHDIISTLVIAYTHLGALQLGKATHAFFIRNLSSWPEEDSAPLETSLLN 498
Query: 479 LLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKH 515
+ R G AL + + V+ W ++ H
Sbjct: 499 MYIRCGSISSALICFNRVVVK-DVVTWTSMIEGFGTH 534
>gi|302815813|ref|XP_002989587.1| hypothetical protein SELMODRAFT_130050 [Selaginella moellendorffii]
gi|300142765|gb|EFJ09463.1| hypothetical protein SELMODRAFT_130050 [Selaginella moellendorffii]
Length = 736
Score = 358 bits (918), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 201/624 (32%), Positives = 335/624 (53%), Gaps = 17/624 (2%)
Query: 8 NGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQ-DAF 66
NG + E L Y M+ G+ + F + + C++ + G+ +H+ +L+ + D
Sbjct: 36 NGHYREALGYYRRMVLEGLRPDGAMFVVAIGVCSSSKDLKQGQLLHAMILETRLLEFDII 95
Query: 67 VQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWV 126
+ T LI MY++C D +RK DEM + ++V+WN++I+ +SR + A+ + ++M
Sbjct: 96 LGTALITMYARCRDLELARKTFDEMGKK--TLVTWNALIAGYSRNGDHRGALKIYQDMVS 153
Query: 127 L---GLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFG 179
G++ A TF S + C+ QG + G ++ I + N++++MY+K G
Sbjct: 154 KSPEGMKPDAITFSSALYACTVVGDISQGREIEARTVASGYASDSI-VQNALINMYSKCG 212
Query: 180 KVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLIL 239
+ AR +FD + +++W T+I GY G +A L +M P++V F+ L+
Sbjct: 213 SLESARKVFDRLKNRDVIAWNTMISGYAKQGAATQALELFQRMGPNDPKPNVVTFIGLLT 272
Query: 240 GCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGD-LELARRVFDAVLEKSVF 298
C + +L ++H + + GY ++ + N+L++MYTKC LE AR+VF+ + + V
Sbjct: 273 ACTNLEDLEQGRAIHRKVREDGYESDLVIGNVLLNMYTKCSSSLEEARQVFERMRTRDVI 332
Query: 299 LWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYI 358
W +I Y Q G +A+++FK++ +V PNE TL+ LSACA LG+ +GK + I
Sbjct: 333 TWNILIVAYVQYGQAKDALDIFKQMQLENVAPNEITLSNVLSACAVLGAKRQGKAVHALI 392
Query: 359 VLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQAL 418
+++ ++ SL++M+++CG ++ VF + DK L WS +I YA HG L
Sbjct: 393 ASGRCKADVVLENSLMNMYNRCGSLDDTVGVFAAIRDKSLVSWSTLIAAYAQHGHSRTGL 452
Query: 419 NLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVD 478
F+++ EGL D V S LSACSH GM+ +G+ F SM + G+ P H+LC+VD
Sbjct: 453 EHFWELLQ-EGLAADDVTMVSTLSACSHGGMLKEGVQTFLSMVGDHGLAPDYRHFLCMVD 511
Query: 479 LLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGN 538
LL RAGR + A IH+MP A W LLS C H++ + A L L +
Sbjct: 512 LLSRAGRLEAAENLIHDMPFLPDAVAWTSLLSGCKLHNDTKRAARVADKLFELESEDEHS 571
Query: 539 YI-LMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVD 597
+ L++N++ AG W + R + R K PG S +EI+ +V FVAGD+SH
Sbjct: 572 TVTLLSNVYAEAGRWDDVRKTR---NRRAARKNPGCSYIEINDTVHEFVAGDKSHPEEEL 628
Query: 598 IRKTLKELHIKLLEAGYIAEADIV 621
I +K L ++ +AGY+ + +V
Sbjct: 629 IAAEIKRLSKQMKDAGYVPDMRMV 652
Score = 218 bits (554), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 122/390 (31%), Positives = 209/390 (53%), Gaps = 15/390 (3%)
Query: 74 MYSKCSDFVSSRKVLD--EMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLEL 131
MY KC + V E P + VSW I++A +R EA+ + M + GL
Sbjct: 1 MYGKCGSVADALAVFHAIEHP----NSVSWTLIVAAFARNGHYREALGYYRRMVLEGLRP 56
Query: 132 SASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSI 187
+ FV + CS +QG +H + + LL +I L ++++MYA+ + AR
Sbjct: 57 DGAMFVVAIGVCSSSKDLKQGQLLHAMILETRLLEFDIILGTALITMYARCRDLELARKT 116
Query: 188 FDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMS---VTPDLVVFLNLILGCAQV 244
FDE+G+ ++V+W +I GY G+ A + M S + PD + F + + C V
Sbjct: 117 FDEMGKKTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACTVV 176
Query: 245 GNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMI 304
G++ + + + SGY ++ + N L++MY+KCG LE AR+VFD + + V W +MI
Sbjct: 177 GDISQGREIEARTVASGYASDSIVQNALINMYSKCGSLESARKVFDRLKNRDVIAWNTMI 236
Query: 305 GGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLE 364
GYA+ G ++A+ LF+R+ +PN T L+AC L L +G+ I + +G E
Sbjct: 237 SGYAKQGAATQALELFQRMGPNDPKPNVVTFIGLLTACTNLEDLEQGRAIHRKVREDGYE 296
Query: 365 SNRQVQTSLIHMFSKC-GRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYK 423
S+ + L++M++KC + +A++VFER+ +D+ W+ +I Y +G AL++F +
Sbjct: 297 SDLVIGNVLLNMYTKCSSSLEEARQVFERMRTRDVITWNILIVAYVQYGQAKDALDIFKQ 356
Query: 424 MQHVEGLKPDAVVYTSILSACSHSGMVDDG 453
MQ +E + P+ + +++LSAC+ G G
Sbjct: 357 MQ-LENVAPNEITLSNVLSACAVLGAKRQG 385
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 120/464 (25%), Positives = 239/464 (51%), Gaps = 18/464 (3%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQT---GVHGNSFTFPLVLKACANINSIWDGKRVHSHVL 57
+I + NG L Y M+ G+ ++ TF L AC + I G+ + + +
Sbjct: 131 LIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACTVVGDISQGREIEARTV 190
Query: 58 KVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEA 117
G+ D+ VQ LI+MYSKC S+RKV D + + R V++WN++IS +++ +A
Sbjct: 191 ASGYASDSIVQNALINMYSKCGSLESARKVFDRL--KNRDVIAWNTMISGYAKQGAATQA 248
Query: 118 ILVLKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMS 173
+ + + M + + TF+ +++ C+ QG ++H V + G +++ + N +++
Sbjct: 249 LELFQRMGPNDPKPNVVTFIGLLTACTNLEDLEQGRAIHRKVREDGY-ESDLVIGNVLLN 307
Query: 174 MYAKFGK-VNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLV 232
MY K + EAR +F+ + +++W +I YV G +A + QM+ +V P+ +
Sbjct: 308 MYTKCSSSLEEARQVFERMRTRDVITWNILIVAYVQYGQAKDALDIFKQMQLENVAPNEI 367
Query: 233 VFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAV 292
N++ CA +G ++H+L+ + L+N L++MY +CG L+ VF A+
Sbjct: 368 TLSNVLSACAVLGAKRQGKAVHALIASGRCKADVVLENSLMNMYNRCGSLDDTVGVFAAI 427
Query: 293 LEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGK 352
+KS+ W+++I YAQ G+ + F LL+ + ++ T+ +TLSAC+ G L +G
Sbjct: 428 RDKSLVSWSTLIAAYAQHGHSRTGLEHFWELLQEGLAADDVTMVSTLSACSHGGMLKEG- 486
Query: 353 EIEEYIVL---NGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPD-KDLAVWSAMINGY 408
++ ++ + +GL + + ++ + S+ GR+ A+ + +P D W+++++G
Sbjct: 487 -VQTFLSMVGDHGLAPDYRHFLCMVDLLSRAGRLEAAENLIHDMPFLPDAVAWTSLLSGC 545
Query: 409 AIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDD 452
+H +A + K+ +E + V T + + + +G DD
Sbjct: 546 KLHNDTKRAARVADKLFELESEDEHSTV-TLLSNVYAEAGRWDD 588
>gi|222641140|gb|EEE69272.1| hypothetical protein OsJ_28537 [Oryza sativa Japonica Group]
Length = 784
Score = 358 bits (918), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 197/619 (31%), Positives = 331/619 (53%), Gaps = 8/619 (1%)
Query: 6 TNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDA 65
N + + + M+ +G+ F F V+ AC +I G++VH+ V+++G+++D
Sbjct: 85 VKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIDAGRQVHAMVVRMGYEKDV 144
Query: 66 FVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMW 125
F L+DMY K + + ++MP VVSWN++IS + AI +L +M
Sbjct: 145 FTANALVDMYVKMGRVDIASVIFEKMPDS--DVVSWNALISGCVLNGHDHRAIELLLQMK 202
Query: 126 VLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKV 181
GL + S++ C+ F G +H + K +++ + ++ MYAK +
Sbjct: 203 SSGLVPNVFMLSSILKACAGAGAFDLGRQIHGFMIKANADSDDY-IGVGLVDMYAKNHFL 261
Query: 182 NEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGC 241
++A +FD + ++ W +I G + G +EAF + +R+ + + ++
Sbjct: 262 DDAMKVFDWMSHRDLILWNALISGCSHGGRHDEAFSIFYGLRKEGLGVNRTTLAAVLKST 321
Query: 242 AQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWT 301
A + +H+L K G+ + + N L+ Y KC L A RVF+ + T
Sbjct: 322 ASLEAASATRQVHALAEKIGFIFDAHVVNGLIDSYWKCSCLSDAIRVFEECSSGDIIAVT 381
Query: 302 SMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLN 361
SMI +Q + A+ LF +L+ + P+ L++ L+ACA L + +GK++ +++
Sbjct: 382 SMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKR 441
Query: 362 GLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLF 421
S+ +L++ ++KCG I A+ F +P++ + WSAMI G A HG G +AL LF
Sbjct: 442 QFMSDAFAGNALVYTYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALELF 501
Query: 422 YKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLG 481
+M EG+ P+ + TS+L AC+H+G+VD+ +F SM+ FGI+ + EHY C++DLLG
Sbjct: 502 GRMVD-EGINPNHITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIDRTEEHYSCMIDLLG 560
Query: 482 RAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYIL 541
RAG+ D A++ ++ MP + A VW LL A H + ELG+ AA+ L L P +G ++L
Sbjct: 561 RAGKLDDAMELVNSMPFQANASVWGALLGASRVHKDPELGKLAAEKLFILEPEKSGTHVL 620
Query: 542 MANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKT 601
+AN + S+GMW E A R LM D + KEP S VE+ V F+ GD+SH ++ +I
Sbjct: 621 LANTYASSGMWNEVAKVRKLMKDSNIKKEPAMSWVEVKDKVHTFIVGDKSHPMTKEIYSK 680
Query: 602 LKELHIKLLEAGYIAEADI 620
L EL + +AGYI D+
Sbjct: 681 LDELGDLMSKAGYIPNVDV 699
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 129/429 (30%), Positives = 217/429 (50%), Gaps = 10/429 (2%)
Query: 21 MLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSD 80
M GV N F P+VLK + G +VH+ + GF D FV L+ MY
Sbjct: 1 MRAEGVCCNEFALPVVLKCVPDAQL---GAQVHAMAMATGFGSDVFVANALVAMYGGFGF 57
Query: 81 FVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVV 140
+R+V DE R+ VSWN ++SA+ + +AI V EM G++ + F VV
Sbjct: 58 MDDARRVFDEAGSE-RNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVV 116
Query: 141 SGCSFRQGIS----MHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSI 196
+ C+ + I +H V ++G ++ AN+++ MY K G+V+ A IF+++ ++ +
Sbjct: 117 NACTGSRNIDAGRQVHAMVVRMG-YEKDVFTANALVDMYVKMGRVDIASVIFEKMPDSDV 175
Query: 197 VSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSL 256
VSW +I G V G+ + A L QM+ + P++ + +++ CA G L +H
Sbjct: 176 VSWNALISGCVLNGHDHRAIELLLQMKSSGLVPNVFMLSSILKACAGAGAFDLGRQIHGF 235
Query: 257 LLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEA 316
++K+ +++D + LV MY K L+ A +VFD + + + LW ++I G + G EA
Sbjct: 236 MIKANADSDDYIGVGLVDMYAKNHFLDDAMKVFDWMSHRDLILWNALISGCSHGGRHDEA 295
Query: 317 VNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHM 376
++F L K + N TLA L + A L + S +++ G + V LI
Sbjct: 296 FSIFYGLRKEGLGVNRTTLAAVLKSTASLEAASATRQVHALAEKIGFIFDAHVVNGLIDS 355
Query: 377 FSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVV 436
+ KC ++ A VFE D+ ++MI + G+ A+ LF +M +GL+PD V
Sbjct: 356 YWKCSCLSDAIRVFEECSSGDIIAVTSMITALSQCDHGEGAIKLFMEMLR-KGLEPDPFV 414
Query: 437 YTSILSACS 445
+S+L+AC+
Sbjct: 415 LSSLLNACA 423
Score = 166 bits (419), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 107/417 (25%), Positives = 198/417 (47%), Gaps = 9/417 (2%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+I NG + M +G+ N F +LKACA + G+++H ++K
Sbjct: 181 LISGCVLNGHDHRAIELLLQMKSSGLVPNVFMLSSILKACAGAGAFDLGRQIHGFMIKAN 240
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
D ++ GL+DMY+K + KV D M R ++ WN++IS S +DEA +
Sbjct: 241 ADSDDYIGVGLVDMYAKNHFLDDAMKVFDWMS--HRDLILWNALISGCSHGGRHDEAFSI 298
Query: 121 LKEMWVLGLELSASTFVSVVSGCSFRQGIS----MHCCVYKLGLLNNEIPLANSVMSMYA 176
+ GL ++ +T +V+ + + S +H K+G + + + N ++ Y
Sbjct: 299 FYGLRKEGLGVNRTTLAAVLKSTASLEAASATRQVHALAEKIGFIFDA-HVVNGLIDSYW 357
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K +++A +F+E I++ T++I + A L +M R + PD V +
Sbjct: 358 KCSCLSDAIRVFEECSSGDIIAVTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSS 417
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
L+ CA + +H+ L+K + ++ N LV Y KCG +E A F ++ E+
Sbjct: 418 LLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSLPERG 477
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKE-IE 355
V W++MIGG AQ G+ A+ LF R++ + PN T+ + L AC G + + K
Sbjct: 478 VVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMTSVLCACNHAGLVDEAKRYFN 537
Query: 356 EYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVP-DKDLAVWSAMINGYAIH 411
+ G++ + + +I + + G+++ A E+ +P + +VW A++ +H
Sbjct: 538 SMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQANASVWGALLGASRVH 594
Score = 122 bits (305), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 77/280 (27%), Positives = 147/280 (52%), Gaps = 8/280 (2%)
Query: 235 LNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFD-AVL 293
L ++L C V + L +H++ + +G+ ++ + N LV+MY G ++ ARRVFD A
Sbjct: 13 LPVVLKC--VPDAQLGAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFDEAGS 70
Query: 294 EKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKE 353
E++ W ++ Y + +A+ +F ++ + ++P E + ++AC ++ G++
Sbjct: 71 ERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIDAGRQ 130
Query: 354 IEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGM 413
+ +V G E + +L+ M+ K GR++ A +FE++PD D+ W+A+I+G ++G
Sbjct: 131 VHAMVVRMGYEKDVFTANALVDMYVKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGH 190
Query: 414 GDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSM-QSNFGIEPSIEH 472
+A+ L +M+ GL P+ + +SIL AC+ +G D G M ++N + I
Sbjct: 191 DHRAIELLLQMKS-SGLVPNVFMLSSILKACAGAGAFDLGRQIHGFMIKANADSDDYIG- 248
Query: 473 YLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSAC 512
+ LVD+ + D A+K M +W L+S C
Sbjct: 249 -VGLVDMYAKNHFLDDAMKVFDWMS-HRDLILWNALISGC 286
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 90/390 (23%), Positives = 179/390 (45%), Gaps = 21/390 (5%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+I ++ G +E S + + + G+ N T VLK+ A++ + ++VH+ K+G
Sbjct: 282 LISGCSHGGRHDEAFSIFYGLRKEGLGVNRTTLAAVLKSTASLEAASATRQVHALAEKIG 341
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F DA V GLID Y KCS + +V +E +++ S+I+A S+ + AI +
Sbjct: 342 FIFDAHVVNGLIDSYWKCSCLSDAIRVFEECSS--GDIIAVTSMITALSQCDHGEGAIKL 399
Query: 121 LKEMWVLGLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
EM GLE S+++ C ++ QG +H + K +++ N+++ YA
Sbjct: 400 FMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFA-GNALVYTYA 458
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K G + +A F + E +VSW+ +IGG G+ A L +M + P+ + +
Sbjct: 459 KCGSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMTS 518
Query: 237 LILGCAQVGNLFLALS-MHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAV-LE 294
++ C G + A +S+ G + + + ++ + + G L+ A + +++ +
Sbjct: 519 VLCACNHAGLVDEAKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQ 578
Query: 295 KSVFLWTSMIGGYAQLGYPS----EAVNLFKRLLKTSVRPNEATLATTLSA------CAE 344
+ +W +++G P A LF +L+ LA T ++ A+
Sbjct: 579 ANASVWGALLGASRVHKDPELGKLAAEKLF--ILEPEKSGTHVLLANTYASSGMWNEVAK 636
Query: 345 LGSLSKGKEIEEYIVLNGLESNRQVQTSLI 374
+ L K I++ ++ +E +V T ++
Sbjct: 637 VRKLMKDSNIKKEPAMSWVEVKDKVHTFIV 666
>gi|302144099|emb|CBI23204.3| unnamed protein product [Vitis vinifera]
Length = 907
Score = 358 bits (918), Expect = 7e-96, Method: Compositional matrix adjust.
Identities = 199/596 (33%), Positives = 320/596 (53%), Gaps = 11/596 (1%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI T G + S Y+ M + G+ +S T +L + + + +H+ V++ G
Sbjct: 120 MIGCYTRAGEHDVAFSMYNIMRRQGIQPSSVTMLGLLSGVLELVHL---QCLHACVIQYG 176
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F D + ++++Y KC ++ + + M R V+SWNS++S +++ E + +
Sbjct: 177 FGSDVALANSMLNVYCKCGRVEDAQALFELMDAR--DVISWNSLVSGYAQLGNIREVLQL 234
Query: 121 LKEMWVLGLELSASTFVSVVSGCSFRQ----GISMHCCVYKLGLLNNEIPLANSVMSMYA 176
L M G+E TF S+VS + + G +H + + GL + + S++ MY
Sbjct: 235 LIRMKTDGIEPDQQTFGSLVSAAAMQSKLGVGKMVHGHILRAGL-EQDSHIETSLIGMYL 293
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K G VN A IF+ + ++SWT +I G V + A + +M + V P +
Sbjct: 294 KCGNVNSAFRIFEGMMHKDVISWTAMISGLVQNDCADMAVTVFRRMLKSRVMPSTATIAS 353
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
++ CA++G+ L S+H +L+ + P N LV+MY KCG LE + VFD + +
Sbjct: 354 VLAACAELGSFPLGTSVHGYILRQRIKLDIPSQNSLVTMYAKCGHLEQSCSVFDRMSRRD 413
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEE 356
+ W +++ G+AQ G+ +A+ LF + K RP+ T+ + L ACA +G+L +GK I
Sbjct: 414 IVSWNAIVSGHAQNGHLCKALLLFNEMRKARQRPDSITVVSLLQACASIGALHQGKWIHN 473
Query: 357 YIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQ 416
++ + L + T+L+ M+SKCG + A++ F+R+P +DL WS++I GY HG G+
Sbjct: 474 FVTKSCLGPCILIDTALVDMYSKCGDLGSAQKCFDRMPQQDLVSWSSIIAGYGSHGKGET 533
Query: 417 ALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCL 476
AL ++ H G++P+ V+Y SILSACSH+G+VD GLSFF SM +FGIEP +EH C+
Sbjct: 534 ALRMYSDFLHT-GIQPNHVIYLSILSACSHNGLVDQGLSFFHSMTKDFGIEPRLEHRACI 592
Query: 477 VDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGST 536
VDLL RAGR + A M + V LL AC NVELG+ A+ ++ L P +
Sbjct: 593 VDLLSRAGRVEEAYSFYKRMFPKPSMDVLGILLDACRTTGNVELGDIVAREIVILKPANA 652
Query: 537 GNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSH 592
GNY+ +A+ + S W M L K PGWS +E+ G++ F SH
Sbjct: 653 GNYVQLAHSYASMKRWDGVGEVWTQMKSLHLKKLPGWSFIELHGTITTFFTDHSSH 708
Score = 286 bits (733), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 159/500 (31%), Positives = 279/500 (55%), Gaps = 6/500 (1%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+I + G+F + L TYSSML T ++ TFP ++KAC +++ G H V+ G
Sbjct: 19 IINRLSTAGAFCDVLLTYSSMLSTDTPPDAHTFPSLVKACTSLDLFSHGLSFHQRVIVDG 78
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+ D+++ T LI+ YSK S+RKV D M R +VV W ++I ++RA +D A +
Sbjct: 79 YSSDSYIATSLINFYSKFGHNQSARKVFDTMDDR--NVVPWTTMIGCYTRAGEHDVAFSM 136
Query: 121 LKEMWVLGLELSASTFVSVVSGC-SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFG 179
M G++ S+ T + ++SG +H CV + G +++ LANS++++Y K G
Sbjct: 137 YNIMRRQGIQPSSVTMLGLLSGVLELVHLQCLHACVIQYGF-GSDVALANSMLNVYCKCG 195
Query: 180 KVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLIL 239
+V +A+++F+ + ++SW +++ GY +GN+ E L +M+ + PD F +L+
Sbjct: 196 RVEDAQALFELMDARDVISWNSLVSGYAQLGNIREVLQLLIRMKTDGIEPDQQTFGSLVS 255
Query: 240 GCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFL 299
A L + +H +L++G + ++ L+ MY KCG++ A R+F+ ++ K V
Sbjct: 256 AAAMQSKLGVGKMVHGHILRAGLEQDSHIETSLIGMYLKCGNVNSAFRIFEGMMHKDVIS 315
Query: 300 WTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIV 359
WT+MI G Q AV +F+R+LK+ V P+ AT+A+ L+ACAELGS G + YI+
Sbjct: 316 WTAMISGLVQNDCADMAVTVFRRMLKSRVMPSTATIASVLAACAELGSFPLGTSVHGYIL 375
Query: 360 LNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALN 419
++ + Q SL+ M++KCG + ++ VF+R+ +D+ W+A+++G+A +G +AL
Sbjct: 376 RQRIKLDIPSQNSLVTMYAKCGHLEQSCSVFDRMSRRDIVSWNAIVSGHAQNGHLCKALL 435
Query: 420 LFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDL 479
LF +M+ +PD++ S+L AC+ G + G + + + + P I LVD+
Sbjct: 436 LFNEMRKARQ-RPDSITVVSLLQACASIGALHQG-KWIHNFVTKSCLGPCILIDTALVDM 493
Query: 480 LGRAGRFDLALKTIHEMPVE 499
+ G A K MP +
Sbjct: 494 YSKCGDLGSAQKCFDRMPQQ 513
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 128/246 (52%), Gaps = 4/246 (1%)
Query: 198 SWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLL 257
S+ II G + + M PD F +L+ C + LS H +
Sbjct: 15 SYNAIINRLSTAGAFCDVLLTYSSMLSTDTPPDAHTFPSLVKACTSLDLFSHGLSFHQRV 74
Query: 258 LKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAV 317
+ GY+++ + L++ Y+K G + AR+VFD + +++V WT+MIG Y + G A
Sbjct: 75 IVDGYSSDSYIATSLINFYSKFGHNQSARKVFDTMDDRNVVPWTTMIGCYTRAGEHDVAF 134
Query: 318 NLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMF 377
+++ + + ++P+ T+ LS EL L + + ++ G S+ + S+++++
Sbjct: 135 SMYNIMRRQGIQPSSVTMLGLLSGVLELVHL---QCLHACVIQYGFGSDVALANSMLNVY 191
Query: 378 SKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVY 437
KCGR+ A+ +FE + +D+ W+++++GYA G + L L +M+ +G++PD +
Sbjct: 192 CKCGRVEDAQALFELMDARDVISWNSLVSGYAQLGNIREVLQLLIRMK-TDGIEPDQQTF 250
Query: 438 TSILSA 443
S++SA
Sbjct: 251 GSLVSA 256
>gi|255539110|ref|XP_002510620.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223551321|gb|EEF52807.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 708
Score = 357 bits (917), Expect = 8e-96, Method: Compositional matrix adjust.
Identities = 193/604 (31%), Positives = 338/604 (55%), Gaps = 8/604 (1%)
Query: 15 LSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDM 74
+ + M + N+ TF + A +N++SI+ G++ H+ +K+ D FV + L++M
Sbjct: 96 MELFQRMRADNILPNAHTFSGIFTAASNLSSIFFGQQAHAVAIKMACFYDVFVGSSLLNM 155
Query: 75 YSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSAS 134
Y K +R+V D MP R + V+W ++IS ++ L EA V + M +++
Sbjct: 156 YCKAGLLFEAREVFDRMPER--NEVTWATMISGYAIQRLAGEAFEVFELMRREEEDVNEF 213
Query: 135 TFVSVVSGCSFRQ----GISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDE 190
F SV+S + + G +HC K GLL + + N++++MYAK G ++++ +F+
Sbjct: 214 AFTSVLSALAVPEFVDSGKQIHCLAVKTGLLVF-LSILNALVTMYAKCGSLDDSLQVFEM 272
Query: 191 IGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLA 250
+ + ++W+ +I GY G+ ++A L ++M + P + ++ C+ +
Sbjct: 273 SNDKNSITWSAMITGYAQSGDSHKALKLFSRMHFAGINPSEFTLVGVLNACSDACAVEEG 332
Query: 251 LSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQL 310
+H+ LLK G+ ++ + LV MY K G E AR+ F+ + + + LWTSMI GY Q
Sbjct: 333 KQVHNYLLKLGFESQLYIMTALVDMYAKSGVTEDARKGFNYLQQPDLVLWTSMIAGYVQN 392
Query: 311 GYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQ 370
G +A++L+ R+ + PNE T+A+ L AC+ L + +G++I + GL +
Sbjct: 393 GENEDALSLYCRMQMEGILPNELTMASVLKACSNLAAFDQGRQIHARTIKYGLGLEVTIG 452
Query: 371 TSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGL 430
++L M++KCG + + VF R+P++D+ W+AMI+G + +G G +AL LF +M+ +
Sbjct: 453 SALSTMYAKCGNLEEGNIVFRRMPERDIISWNAMISGLSQNGYGKEALELFEEMRQ-QDT 511
Query: 431 KPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLAL 490
KPD V + ++LSACSH G+VD G +F+ M FG+ P +EHY C+VD+L RAG+ A
Sbjct: 512 KPDDVTFVNVLSACSHMGLVDSGWLYFRMMFDEFGLLPKVEHYACMVDVLSRAGKLYEAK 571
Query: 491 KTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSAG 550
+ I ++ +W LL AC + N ELG YA + L+ L + Y+L++ ++T+ G
Sbjct: 572 EFIESTTIDHGLCLWRILLGACRNYRNYELGAYAGEKLMELGSQESSAYVLLSGIYTALG 631
Query: 551 MWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKELHIKLL 610
++ R +M R ++KEPG S +E+ +V VFV GD+ H +IR + L ++
Sbjct: 632 RPEDVERVRSMMKVRGVSKEPGCSWIELKSNVHVFVVGDQMHPCIGEIRTEILRLSKQMK 691
Query: 611 EAGY 614
+ GY
Sbjct: 692 DEGY 695
Score = 199 bits (505), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 124/434 (28%), Positives = 228/434 (52%), Gaps = 12/434 (2%)
Query: 45 SIWDGKRVHSHVLKVGFQQDA-FVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNS 103
S+ G+ +H+ ++K+ ++ LI+ Y+KC ++ V D + + V+SWN
Sbjct: 22 SLQKGRALHAQIIKLASSSSCIYLANSLINFYAKCCHLPKAKLVFDR--IHNKDVISWNC 79
Query: 104 IISAHSRACLNDEAIL--VLKEMWVLGLELSASTFVSVVSGCSFRQGI----SMHCCVYK 157
+I+ +S+ + + + + M + +A TF + + S I H K
Sbjct: 80 LINGYSQQGPTGSSFVMELFQRMRADNILPNAHTFSGIFTAASNLSSIFFGQQAHAVAIK 139
Query: 158 LGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFG 217
+ ++ + +S+++MY K G + EAR +FD + E + V+W T+I GY EAF
Sbjct: 140 MACF-YDVFVGSSLLNMYCKAGLLFEAREVFDRMPERNEVTWATMISGYAIQRLAGEAFE 198
Query: 218 LCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYT 277
+ MRR + F +++ A + +H L +K+G + N LV+MY
Sbjct: 199 VFELMRREEEDVNEFAFTSVLSALAVPEFVDSGKQIHCLAVKTGLLVFLSILNALVTMYA 258
Query: 278 KCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLAT 337
KCG L+ + +VF+ +K+ W++MI GYAQ G +A+ LF R+ + P+E TL
Sbjct: 259 KCGSLDDSLQVFEMSNDKNSITWSAMITGYAQSGDSHKALKLFSRMHFAGINPSEFTLVG 318
Query: 338 TLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKD 397
L+AC++ ++ +GK++ Y++ G ES + T+L+ M++K G A++ F + D
Sbjct: 319 VLNACSDACAVEEGKQVHNYLLKLGFESQLYIMTALVDMYAKSGVTEDARKGFNYLQQPD 378
Query: 398 LAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFF 457
L +W++MI GY +G + AL+L+ +MQ +EG+ P+ + S+L ACS+ D G
Sbjct: 379 LVLWTSMIAGYVQNGENEDALSLYCRMQ-MEGILPNELTMASVLKACSNLAAFDQGRQIH 437
Query: 458 -KSMQSNFGIEPSI 470
++++ G+E +I
Sbjct: 438 ARTIKYGLGLEVTI 451
Score = 164 bits (416), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 108/362 (29%), Positives = 180/362 (49%), Gaps = 4/362 (1%)
Query: 132 SASTFVSVVSGCSFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEI 191
S ++ V S ++G ++H + KL ++ I LANS+++ YAK + +A+ +FD I
Sbjct: 10 SFNSLVQFTHQKSLQKGRALHAQIIKLASSSSCIYLANSLINFYAKCCHLPKAKLVFDRI 69
Query: 192 GETSIVSWTTIIGGYVNVGNVNEAF--GLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFL 249
++SW +I GY G +F L +MR ++ P+ F + + + ++F
Sbjct: 70 HNKDVISWNCLINGYSQQGPTGSSFVMELFQRMRADNILPNAHTFSGIFTAASNLSSIFF 129
Query: 250 ALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQ 309
H++ +K + + + L++MY K G L AR VFD + E++ W +MI GYA
Sbjct: 130 GQQAHAVAIKMACFYDVFVGSSLLNMYCKAGLLFEAREVFDRMPERNEVTWATMISGYAI 189
Query: 310 LGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQV 369
EA +F+ + + NE + LSA A + GK+I V GL +
Sbjct: 190 QRLAGEAFEVFELMRREEEDVNEFAFTSVLSALAVPEFVDSGKQIHCLAVKTGLLVFLSI 249
Query: 370 QTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEG 429
+L+ M++KCG ++ + +VFE DK+ WSAMI GYA G +AL LF +M H G
Sbjct: 250 LNALVTMYAKCGSLDDSLQVFEMSNDKNSITWSAMITGYAQSGDSHKALKLFSRM-HFAG 308
Query: 430 LKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLA 489
+ P +L+ACS + V++G + G E + LVD+ ++G + A
Sbjct: 309 INPSEFTLVGVLNACSDACAVEEGKQVHNYLL-KLGFESQLYIMTALVDMYAKSGVTEDA 367
Query: 490 LK 491
K
Sbjct: 368 RK 369
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 106/403 (26%), Positives = 199/403 (49%), Gaps = 17/403 (4%)
Query: 13 ETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLI 72
E + M + N F F VL A A + GK++H +K G + L+
Sbjct: 195 EAFEVFELMRREEEDVNEFAFTSVLSALAVPEFVDSGKQIHCLAVKTGLLVFLSILNALV 254
Query: 73 DMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELS 132
MY+KC S +V EM ++ ++W+++I+ ++++ + +A+ + M G+ S
Sbjct: 255 TMYAKCGSLDDSLQVF-EMS-NDKNSITWSAMITGYAQSGDSHKALKLFSRMHFAGINPS 312
Query: 133 ASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIF 188
T V V++ CS +G +H + KLG +++ + +++ MYAK G +AR F
Sbjct: 313 EFTLVGVLNACSDACAVEEGKQVHNYLLKLG-FESQLYIMTALVDMYAKSGVTEDARKGF 371
Query: 189 DEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLF 248
+ + + +V WT++I GYV G +A L +M+ + P+ + +++ C+ +
Sbjct: 372 NYLQQPDLVLWTSMIAGYVQNGENEDALSLYCRMQMEGILPNELTMASVLKACSNLAAFD 431
Query: 249 LALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYA 308
+H+ +K G E + + L +MY KCG+LE VF + E+ + W +MI G +
Sbjct: 432 QGRQIHARTIKYGLGLEVTIGSALSTMYAKCGNLEEGNIVFRRMPERDIISWNAMISGLS 491
Query: 309 QLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKG-----KEIEEYIVLNGL 363
Q GY EA+ LF+ + + +P++ T LSAC+ +G + G +E+ +L +
Sbjct: 492 QNGYGKEALELFEEMRQQDTKPDDVTFVNVLSACSHMGLVDSGWLYFRMMFDEFGLLPKV 551
Query: 364 ESNRQVQTSLIHMFSKCGRINKAKEVFERVP-DKDLAVWSAMI 405
E ++ + S+ G++ +AKE E D L +W ++
Sbjct: 552 EH----YACMVDVLSRAGKLYEAKEFIESTTIDHGLCLWRILL 590
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 76/249 (30%), Positives = 133/249 (53%), Gaps = 7/249 (2%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI +G + L +S M G++ + FT VL AC++ ++ +GK+VH+++LK+G
Sbjct: 284 MITGYAQSGDSHKALKLFSRMHFAGINPSEFTLVGVLNACSDACAVEEGKQVHNYLLKLG 343
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F+ ++ T L+DMY+K +RK + + + +V W S+I+ + + N++A+ +
Sbjct: 344 FESQLYIMTALVDMYAKSGVTEDARKGFNYL--QQPDLVLWTSMIAGYVQNGENEDALSL 401
Query: 121 LKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
M + G+ + T SV+ CS F QG +H K G L E+ + +++ +MYA
Sbjct: 402 YCRMQMEGILPNELTMASVLKACSNLAAFDQGRQIHARTIKYG-LGLEVTIGSALSTMYA 460
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K G + E +F + E I+SW +I G G EA L +MR+ PD V F+N
Sbjct: 461 KCGNLEEGNIVFRRMPERDIISWNAMISGLSQNGYGKEALELFEEMRQQDTKPDDVTFVN 520
Query: 237 LILGCAQVG 245
++ C+ +G
Sbjct: 521 VLSACSHMG 529
>gi|115478174|ref|NP_001062682.1| Os09g0251500 [Oryza sativa Japonica Group]
gi|47848472|dbj|BAD22327.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|47848643|dbj|BAD22491.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113630915|dbj|BAF24596.1| Os09g0251500 [Oryza sativa Japonica Group]
gi|215767397|dbj|BAG99625.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 877
Score = 357 bits (917), Expect = 8e-96, Method: Compositional matrix adjust.
Identities = 197/619 (31%), Positives = 331/619 (53%), Gaps = 8/619 (1%)
Query: 6 TNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDA 65
N + + + M+ +G+ F F V+ AC +I G++VH+ V+++G+++D
Sbjct: 178 VKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIDAGRQVHAMVVRMGYEKDV 237
Query: 66 FVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMW 125
F L+DMY K + + ++MP VVSWN++IS + AI +L +M
Sbjct: 238 FTANALVDMYVKMGRVDIASVIFEKMPDS--DVVSWNALISGCVLNGHDHRAIELLLQMK 295
Query: 126 VLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKV 181
GL + S++ C+ F G +H + K +++ + ++ MYAK +
Sbjct: 296 SSGLVPNVFMLSSILKACAGAGAFDLGRQIHGFMIKANADSDDY-IGVGLVDMYAKNHFL 354
Query: 182 NEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGC 241
++A +FD + ++ W +I G + G +EAF + +R+ + + ++
Sbjct: 355 DDAMKVFDWMSHRDLILWNALISGCSHGGRHDEAFSIFYGLRKEGLGVNRTTLAAVLKST 414
Query: 242 AQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWT 301
A + +H+L K G+ + + N L+ Y KC L A RVF+ + T
Sbjct: 415 ASLEAASATRQVHALAEKIGFIFDAHVVNGLIDSYWKCSCLSDAIRVFEECSSGDIIAVT 474
Query: 302 SMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLN 361
SMI +Q + A+ LF +L+ + P+ L++ L+ACA L + +GK++ +++
Sbjct: 475 SMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKR 534
Query: 362 GLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLF 421
S+ +L++ ++KCG I A+ F +P++ + WSAMI G A HG G +AL LF
Sbjct: 535 QFMSDAFAGNALVYTYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALELF 594
Query: 422 YKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLG 481
+M EG+ P+ + TS+L AC+H+G+VD+ +F SM+ FGI+ + EHY C++DLLG
Sbjct: 595 GRMVD-EGINPNHITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIDRTEEHYSCMIDLLG 653
Query: 482 RAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYIL 541
RAG+ D A++ ++ MP + A VW LL A H + ELG+ AA+ L L P +G ++L
Sbjct: 654 RAGKLDDAMELVNSMPFQANASVWGALLGASRVHKDPELGKLAAEKLFILEPEKSGTHVL 713
Query: 542 MANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKT 601
+AN + S+GMW E A R LM D + KEP S VE+ V F+ GD+SH ++ +I
Sbjct: 714 LANTYASSGMWNEVAKVRKLMKDSNIKKEPAMSWVEVKDKVHTFIVGDKSHPMTKEIYSK 773
Query: 602 LKELHIKLLEAGYIAEADI 620
L EL + +AGYI D+
Sbjct: 774 LDELGDLMSKAGYIPNVDV 792
Score = 203 bits (516), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 132/444 (29%), Positives = 223/444 (50%), Gaps = 10/444 (2%)
Query: 6 TNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDA 65
+NNG + + M GV N F P+VLK + G +VH+ + GF D
Sbjct: 79 SNNGLPRSAIQAFHGMRAEGVCCNEFALPVVLKCVPDAQL---GAQVHAMAMATGFGSDV 135
Query: 66 FVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMW 125
FV L+ MY +R+V DE R+ VSWN ++SA+ + +AI V EM
Sbjct: 136 FVANALVAMYGGFGFMDDARRVFDEAGSE-RNAVSWNGLMSAYVKNDQCGDAIQVFGEMV 194
Query: 126 VLGLELSASTFVSVVSGCSFRQGIS----MHCCVYKLGLLNNEIPLANSVMSMYAKFGKV 181
G++ + F VV+ C+ + I +H V ++G ++ AN+++ MY K G+V
Sbjct: 195 WSGIQPTEFGFSCVVNACTGSRNIDAGRQVHAMVVRMG-YEKDVFTANALVDMYVKMGRV 253
Query: 182 NEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGC 241
+ A IF+++ ++ +VSW +I G V G+ + A L QM+ + P++ + +++ C
Sbjct: 254 DIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKSSGLVPNVFMLSSILKAC 313
Query: 242 AQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWT 301
A G L +H ++K+ +++D + LV MY K L+ A +VFD + + + LW
Sbjct: 314 AGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDAMKVFDWMSHRDLILWN 373
Query: 302 SMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLN 361
++I G + G EA ++F L K + N TLA L + A L + S +++
Sbjct: 374 ALISGCSHGGRHDEAFSIFYGLRKEGLGVNRTTLAAVLKSTASLEAASATRQVHALAEKI 433
Query: 362 GLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLF 421
G + V LI + KC ++ A VFE D+ ++MI + G+ A+ LF
Sbjct: 434 GFIFDAHVVNGLIDSYWKCSCLSDAIRVFEECSSGDIIAVTSMITALSQCDHGEGAIKLF 493
Query: 422 YKMQHVEGLKPDAVVYTSILSACS 445
+M +GL+PD V +S+L+AC+
Sbjct: 494 MEMLR-KGLEPDPFVLSSLLNACA 516
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 110/407 (27%), Positives = 208/407 (51%), Gaps = 12/407 (2%)
Query: 41 ANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVS 100
A ++ G +H+++LK GF A ++ LI YSKC +R+V DE+P VS
Sbjct: 15 AAAQALLPGAHLHANLLKSGFL--ASLRNHLISFYSKCRRPCCARRVFDEIPDPCH--VS 70
Query: 101 WNSIISAHSRACLNDEAILVLKEMWVLGL---ELSASTFVSVVSGCSFRQGISMHCCVYK 157
W+S+++A+S L AI M G+ E + + V G +H
Sbjct: 71 WSSLVTAYSNNGLPRSAIQAFHGMRAEGVCCNEFALPVVLKCVPDAQL--GAQVHAMAMA 128
Query: 158 LGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIG-ETSIVSWTTIIGGYVNVGNVNEAF 216
G +++ +AN++++MY FG +++AR +FDE G E + VSW ++ YV +A
Sbjct: 129 TGF-GSDVFVANALVAMYGGFGFMDDARRVFDEAGSERNAVSWNGLMSAYVKNDQCGDAI 187
Query: 217 GLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMY 276
+ +M + P F ++ C N+ +H+++++ GY + N LV MY
Sbjct: 188 QVFGEMVWSGIQPTEFGFSCVVNACTGSRNIDAGRQVHAMVVRMGYEKDVFTANALVDMY 247
Query: 277 TKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLA 336
K G +++A +F+ + + V W ++I G G+ A+ L ++ + + PN L+
Sbjct: 248 VKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKSSGLVPNVFMLS 307
Query: 337 TTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDK 396
+ L ACA G+ G++I +++ +S+ + L+ M++K ++ A +VF+ + +
Sbjct: 308 SILKACAGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDAMKVFDWMSHR 367
Query: 397 DLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSA 443
DL +W+A+I+G + G D+A ++FY ++ EGL + ++L +
Sbjct: 368 DLILWNALISGCSHGGRHDEAFSIFYGLRK-EGLGVNRTTLAAVLKS 413
Score = 165 bits (418), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 107/417 (25%), Positives = 198/417 (47%), Gaps = 9/417 (2%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+I NG + M +G+ N F +LKACA + G+++H ++K
Sbjct: 274 LISGCVLNGHDHRAIELLLQMKSSGLVPNVFMLSSILKACAGAGAFDLGRQIHGFMIKAN 333
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
D ++ GL+DMY+K + KV D M R ++ WN++IS S +DEA +
Sbjct: 334 ADSDDYIGVGLVDMYAKNHFLDDAMKVFDWMS--HRDLILWNALISGCSHGGRHDEAFSI 391
Query: 121 LKEMWVLGLELSASTFVSVVSGCSFRQGIS----MHCCVYKLGLLNNEIPLANSVMSMYA 176
+ GL ++ +T +V+ + + S +H K+G + + + N ++ Y
Sbjct: 392 FYGLRKEGLGVNRTTLAAVLKSTASLEAASATRQVHALAEKIGFIFDA-HVVNGLIDSYW 450
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K +++A +F+E I++ T++I + A L +M R + PD V +
Sbjct: 451 KCSCLSDAIRVFEECSSGDIIAVTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSS 510
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
L+ CA + +H+ L+K + ++ N LV Y KCG +E A F ++ E+
Sbjct: 511 LLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSLPERG 570
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKE-IE 355
V W++MIGG AQ G+ A+ LF R++ + PN T+ + L AC G + + K
Sbjct: 571 VVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMTSVLCACNHAGLVDEAKRYFN 630
Query: 356 EYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVP-DKDLAVWSAMINGYAIH 411
+ G++ + + +I + + G+++ A E+ +P + +VW A++ +H
Sbjct: 631 SMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQANASVWGALLGASRVH 687
>gi|357130605|ref|XP_003566938.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Brachypodium distachyon]
Length = 670
Score = 357 bits (917), Expect = 9e-96, Method: Compositional matrix adjust.
Identities = 196/586 (33%), Positives = 325/586 (55%), Gaps = 13/586 (2%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKR----VHSHV 56
MIR + + + L + +M ++GV +++T V ++ A S W G+ VH+ V
Sbjct: 90 MIRGYNSCHAPMDALELFRAMRRSGVSPDNYTMAAVAQSSAAFAS-WKGRATGDAVHALV 148
Query: 57 LKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDE 116
++GF D FV +GLI+ Y +RKV +EM R VVSW +ISA ++ D
Sbjct: 149 QRIGFASDLFVMSGLINFYGASKSVEDARKVFEEM--HERDVVSWTLMISAFAQCGQWDN 206
Query: 117 AILVLKEMWVLGLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVM 172
+ L EM G + + T +S++S C + +G+ ++ V + G+ ++ + N+++
Sbjct: 207 VLRSLDEMQSEGTKPNKITIISLLSACGQVRAVDKGLWVYARVDEYGI-EADVDIRNALI 265
Query: 173 SMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLV 232
MY K G +++A F + + SW T+I G+V G EA + +M V PD++
Sbjct: 266 GMYVKCGCMSDAWKTFKGMPIRNTKSWNTLIDGFVQNGKHKEALTMFEEMLSDGVIPDVI 325
Query: 233 VFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAV 292
++++ AQ+G+L +H+ + + + L N L++MY KCGD+ A +F+ +
Sbjct: 326 TLVSVLSTYAQLGDLQQGRYLHNYIKDHEIHCDIILQNSLINMYAKCGDMAAAEIIFENM 385
Query: 293 LEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGK 352
+ + WT+M+ GY + A NLF + V +E L + LSAC++LG+L KG+
Sbjct: 386 ARRDIVSWTAMVCGYVKGLQFRTAFNLFDDMKVRDVMASEMALVSLLSACSQLGALDKGR 445
Query: 353 EIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHG 412
EI YI + ++ ++++L+ M++KCG I+ A E+F R+ K W+AMI G A G
Sbjct: 446 EIHSYIKEKSVRTDMWLESALVDMYAKCGCIDAAAEIFSRMRHKQTLAWNAMIGGLASQG 505
Query: 413 MGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEH 472
G +A+ LF ++ + KPDA+ +L AC+H GMVD+GL +F M + GI P EH
Sbjct: 506 QGKEAVALFEQLLKLRDPKPDAITLKVVLCACTHVGMVDEGLHYFNLMLT-LGIVPDNEH 564
Query: 473 YLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLN 532
Y C+VDLLGRAG D A I +MP++ +W LL+AC HH +ELG+ ++++ L
Sbjct: 565 YGCIVDLLGRAGLLDEAYNFIQKMPIQPNPVIWGSLLAACRVHHRMELGKIIGQHIIDLA 624
Query: 533 PGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEI 578
P G ++L++NL G W + RG+M RR+ K PG S +++
Sbjct: 625 PNDVGAHVLISNLHAEEGQWDDVEQVRGMMGSRRVEKSPGHSSIQV 670
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 143/277 (51%), Gaps = 12/277 (4%)
Query: 184 ARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQ 243
AR +FD + + + + W +I GY + +A L MRR V+PD + AQ
Sbjct: 72 ARKVFDRMAQPTAIVWNCMIRGYNSCHAPMDALELFRAMRRSGVSPDNYT----MAAVAQ 127
Query: 244 VGNLFLAL-------SMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
F + ++H+L+ + G+ ++ + + L++ Y +E AR+VF+ + E+
Sbjct: 128 SSAAFASWKGRATGDAVHALVQRIGFASDLFVMSGLINFYGASKSVEDARKVFEEMHERD 187
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEE 356
V WT MI +AQ G + + +PN+ T+ + LSAC ++ ++ KG +
Sbjct: 188 VVSWTLMISAFAQCGQWDNVLRSLDEMQSEGTKPNKITIISLLSACGQVRAVDKGLWVYA 247
Query: 357 YIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQ 416
+ G+E++ ++ +LI M+ KCG ++ A + F+ +P ++ W+ +I+G+ +G +
Sbjct: 248 RVDEYGIEADVDIRNALIGMYVKCGCMSDAWKTFKGMPIRNTKSWNTLIDGFVQNGKHKE 307
Query: 417 ALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDG 453
AL +F +M +G+ PD + S+LS + G + G
Sbjct: 308 ALTMFEEMLS-DGVIPDVITLVSVLSTYAQLGDLQQG 343
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 78/278 (28%), Positives = 132/278 (47%), Gaps = 16/278 (5%)
Query: 240 GCAQVGNLFLALSMHSLLLKSGYNNEDP-----LDNLLVSMYTKCGDLELARRVFDAVLE 294
CA NL +H L+++ + DP L LL S ++ D+ AR+VFD + +
Sbjct: 27 ACASRANL---AELHGRLVRA-HLGSDPCVAGRLVTLLASPVSR-HDMPYARKVFDRMAQ 81
Query: 295 KSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSL---SKG 351
+ +W MI GY P +A+ LF+ + ++ V P+ T+A + A S + G
Sbjct: 82 PTAIVWNCMIRGYNSCHAPMDALELFRAMRRSGVSPDNYTMAAVAQSSAAFASWKGRATG 141
Query: 352 KEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIH 411
+ + G S+ V + LI+ + + A++VFE + ++D+ W+ MI+ +A
Sbjct: 142 DAVHALVQRIGFASDLFVMSGLINFYGASKSVEDARKVFEEMHERDVVSWTLMISAFAQC 201
Query: 412 GMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIE 471
G D L +MQ EG KP+ + S+LSAC VD GL + + +GIE ++
Sbjct: 202 GQWDNVLRSLDEMQS-EGTKPNKITIISLLSACGQVRAVDKGLWVYARV-DEYGIEADVD 259
Query: 472 HYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLL 509
L+ + + G A KT MP+ + W L+
Sbjct: 260 IRNALIGMYVKCGCMSDAWKTFKGMPIR-NTKSWNTLI 296
>gi|449510623|ref|XP_004163716.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g27610-like [Cucumis sativus]
Length = 878
Score = 357 bits (916), Expect = 9e-96, Method: Compositional matrix adjust.
Identities = 210/620 (33%), Positives = 340/620 (54%), Gaps = 14/620 (2%)
Query: 8 NGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFV 67
NG +E + + M GV+ N FTF VL A A+ + I G +VH+ ++K GF+ FV
Sbjct: 183 NGLNDEVIHLINQMQMEGVNPNGFTFATVLGALADESIIEGGVQVHAMIVKNGFEFTTFV 242
Query: 68 QTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVL 127
LI MY K + V D M VR V+WN +I ++ E + M +
Sbjct: 243 CNALICMYLKSEMVGDAEAVFDSMVVR--DSVTWNIMIGGYAAIGFYLEGFQMFHRMRLA 300
Query: 128 GLELSASTFVSVVSGCSFRQGIS----MHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNE 183
G++LS + F + + CS ++ ++ +HC V K G + + ++M Y+K V+E
Sbjct: 301 GVKLSRTVFCTALKLCSQQRELNFTKQLHCGVVKNGYEFAQ-DIRTALMVTYSKCSSVDE 359
Query: 184 ARSIFDEIGET-SIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCA 242
A +F ++V+WT +IGG+V N +A L QM R V P+ + ++ G
Sbjct: 360 AFKLFSMADAAHNVVTWTAMIGGFVQNNNNKKAVDLFCQMSREGVRPNHFTYSTVLAGKP 419
Query: 243 QVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTS 302
L +H+ ++K+ Y + L+ Y K G++ + RVF ++ K + W++
Sbjct: 420 SS----LLSQLHAQIIKAYYEKVPSVATALLDAYVKTGNVVESARVFYSIPAKDIVAWSA 475
Query: 303 MIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAE-LGSLSKGKEIEEYIVLN 361
M+ G AQ +A+ +F +L+K V+PNE T ++ ++AC+ ++ GK+I V +
Sbjct: 476 MLTGLAQTRDSEKAMEVFIQLVKEGVKPNEYTFSSVINACSSSAATVEHGKQIHATAVKS 535
Query: 362 GLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLF 421
G + V ++L+ M+SK G I A++VF R ++D+ W++MI GY HG +AL +F
Sbjct: 536 GKSNALCVSSALLTMYSKKGNIESAEKVFTRQEERDIVSWNSMITGYGQHGDAKKALEVF 595
Query: 422 YKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLG 481
MQ+ +GL D V + +L+AC+H+G+V++G +F M ++ I+ EHY C+VDL
Sbjct: 596 QIMQN-QGLPLDDVTFIGVLTACTHAGLVEEGEKYFNIMIKDYHIDKKXEHYSCMVDLYS 654
Query: 482 RAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYIL 541
RAG FD A+ I+ MP +W LL+AC H N+ELG+ AA+ L++L P Y+L
Sbjct: 655 RAGMFDKAMDIINGMPFPASPTIWRTLLAACRVHRNLELGKLAAEKLVSLQPNDAVGYVL 714
Query: 542 MANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKT 601
++N+ AG W+E A R LMD+R++ KE G S +EI + F+AGD SH S +
Sbjct: 715 LSNIHAVAGNWEEKAHVRKLMDERKVKKEAGCSWIEIKNRIFSFLAGDVSHPFSDLVYAK 774
Query: 602 LKELHIKLLEAGYIAEADIV 621
L+EL IKL + GY + + V
Sbjct: 775 LEELSIKLKDMGYQPDTNYV 794
Score = 217 bits (553), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 135/448 (30%), Positives = 228/448 (50%), Gaps = 13/448 (2%)
Query: 6 TNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDA 65
+ N E L + + +G+ + T LK C + G++VH LK GF +D
Sbjct: 80 SRNNHDREALHLFKDLHSSGLGVDGLTLSCALKVCGVLFDQVVGRQVHCQSLKSGFLEDV 139
Query: 66 FVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMW 125
V T L+DMY K DF R + DEM + ++VVSW S++S ++R LNDE I ++ +M
Sbjct: 140 SVGTSLVDMYMKTEDFEDGRGIFDEMGI--KNVVSWTSLLSGYARNGLNDEVIHLINQMQ 197
Query: 126 VLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKV 181
+ G+ + TF +V+ + G+ +H + K G + N+++ MY K V
Sbjct: 198 MEGVNPNGFTFATVLGALADESIIEGGVQVHAMIVKNGFEFTTF-VCNALICMYLKSEMV 256
Query: 182 NEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGC 241
+A ++FD + V+W +IGGY +G E F + ++MR V VF + C
Sbjct: 257 GDAEAVFDSMVVRDSVTWNIMIGGYAAIGFYLEGFQMFHRMRLAGVKLSRTVFCTALKLC 316
Query: 242 AQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFD-AVLEKSVFLW 300
+Q L +H ++K+GY + L+ Y+KC ++ A ++F A +V W
Sbjct: 317 SQQRELNFTKQLHCGVVKNGYEFAQDIRTALMVTYSKCSSVDEAFKLFSMADAAHNVVTW 376
Query: 301 TSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVL 360
T+MIGG+ Q +AV+LF ++ + VRPN T +T L+ S ++ I+
Sbjct: 377 TAMIGGFVQNNNNKKAVDLFCQMSREGVRPNHFTYSTVLAGKPS----SLLSQLHAQIIK 432
Query: 361 NGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNL 420
E V T+L+ + K G + ++ VF +P KD+ WSAM+ G A ++A+ +
Sbjct: 433 AYYEKVPSVATALLDAYVKTGNVVESARVFYSIPAKDIVAWSAMLTGLAQTRDSEKAMEV 492
Query: 421 FYKMQHVEGLKPDAVVYTSILSACSHSG 448
F ++ EG+KP+ ++S+++ACS S
Sbjct: 493 FIQLVK-EGVKPNEYTFSSVINACSSSA 519
Score = 168 bits (426), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 102/365 (27%), Positives = 190/365 (52%), Gaps = 9/365 (2%)
Query: 84 SRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGC 143
+ ++ DE P L+ + +N ++ SR + EA+ + K++ GL + T + C
Sbjct: 57 AHQLFDETP--LKDISHYNRLLFDFSRNNHDREALHLFKDLHSSGLGVDGLTLSCALKVC 114
Query: 144 S--FRQ--GISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSW 199
F Q G +HC K G L ++ + S++ MY K + R IFDE+G ++VSW
Sbjct: 115 GVLFDQVVGRQVHCQSLKSGFLE-DVSVGTSLVDMYMKTEDFEDGRGIFDEMGIKNVVSW 173
Query: 200 TTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLK 259
T+++ GY G +E L NQM+ V P+ F ++ A + + +H++++K
Sbjct: 174 TSLLSGYARNGLNDEVIHLINQMQMEGVNPNGFTFATVLGALADESIIEGGVQVHAMIVK 233
Query: 260 SGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNL 319
+G+ + N L+ MY K + A VFD+++ + W MIGGYA +G+ E +
Sbjct: 234 NGFEFTTFVCNALICMYLKSEMVGDAEAVFDSMVVRDSVTWNIMIGGYAAIGFYLEGFQM 293
Query: 320 FKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSK 379
F R+ V+ + T L C++ L+ K++ +V NG E + ++T+L+ +SK
Sbjct: 294 FHRMRLAGVKLSRTVFCTALKLCSQQRELNFTKQLHCGVVKNGYEFAQDIRTALMVTYSK 353
Query: 380 CGRINKAKEVFERV-PDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYT 438
C +++A ++F ++ W+AMI G+ + +A++LF +M EG++P+ Y+
Sbjct: 354 CSSVDEAFKLFSMADAAHNVVTWTAMIGGFVQNNNNKKAVDLFCQMSR-EGVRPNHFTYS 412
Query: 439 SILSA 443
++L+
Sbjct: 413 TVLAG 417
>gi|347954528|gb|AEP33764.1| organelle transcript processing 82, partial [Iberis amara]
Length = 666
Score = 357 bits (916), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 201/617 (32%), Positives = 336/617 (54%), Gaps = 54/617 (8%)
Query: 50 KRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMP--------VRLRSVVSW 101
+ +H+ ++K G + + LI+ F D +P ++ +++ W
Sbjct: 7 RMIHAQMIKTGLHNTNYALSKLIE-------FCILSPHFDGLPYAISVFETIQEPNLLIW 59
Query: 102 NSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYK 157
N++ H+ + A+ + M LGL ++ TF ++ C+ F++G +H V K
Sbjct: 60 NTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAKSKAFKEGQQIHGHVLK 119
Query: 158 LGLLNNEIPLANSVMSMYAKFGKVNEARSIFDE--------------------------- 190
LG + ++ + S++SMY + G++ +A +FDE
Sbjct: 120 LGC-DLDLYVHTSLISMYVQNGRLEDAHKVFDESPHRDVVSYTALIKGYASRGYIENAQK 178
Query: 191 ----IGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGN 246
I +VSW +I GY GN EA L M + +V PD + ++ CAQ G+
Sbjct: 179 MFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGS 238
Query: 247 LFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGG 306
+ L +HS + G+ + + N L+ +Y+KCG+LE A +F+ + K V W ++IGG
Sbjct: 239 IELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFEGLPYKDVISWNTLIGG 298
Query: 307 YAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYI--VLNGLE 364
Y + EA+ LF+ +L++ PN+ T+ + L ACA LG++ G+ I YI L G+
Sbjct: 299 YTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVA 358
Query: 365 SNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKM 424
+ ++TSLI M++KCG I A +VF + K L+ W+AMI G+A+HG D + ++F +M
Sbjct: 359 NASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDIFSRM 418
Query: 425 QHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAG 484
+ G++PD + + +LSACSHSGM+D G F+SM ++ + P +EHY C++DLLG +G
Sbjct: 419 RK-NGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTQDYKMTPKLEHYGCMIDLLGHSG 477
Query: 485 RFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMAN 544
F A + I+ M +E +W LL AC H NVELGE A+NL+ + P + G+Y+L++N
Sbjct: 478 LFKEAEEMINTMEMEPDGVIWCSLLKACKMHGNVELGESFAQNLIKIEPENPGSYVLLSN 537
Query: 545 LFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKE 604
++ +AG W E A R L++D+ + K PG S +EID V F+ GD+ H + +I L+E
Sbjct: 538 IYATAGRWNEVANTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEE 597
Query: 605 LHIKLLEAGYIAEADIV 621
+ + L EAG++ + V
Sbjct: 598 MEVLLEEAGFVPDTSEV 614
Score = 219 bits (559), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 146/509 (28%), Positives = 244/509 (47%), Gaps = 74/509 (14%)
Query: 15 LSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDM 74
L Y M+ G+ NS+TFP +LK+CA + +G+++H HVLK+G D +V T LI M
Sbjct: 76 LKLYVCMISLGLLPNSYTFPFLLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISM 135
Query: 75 YSKCSDFVSSRKVLDEMPVR-----------------------------LRSVVSWNSII 105
Y + + KV DE P R ++ VVSWN++I
Sbjct: 136 YVQNGRLEDAHKVFDESPHRDVVSYTALIKGYASRGYIENAQKMFDEIPVKDVVSWNAMI 195
Query: 106 SAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLL 161
S ++ EA+ + K+M + ST V+VVS C S G +H + G
Sbjct: 196 SGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHSWIDDHGFG 255
Query: 162 NNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQ 221
+N + + N+++ +Y+K G++ A +F+ + ++SW T+IGGY ++ EA L +
Sbjct: 256 SN-LKIVNALIDLYSKCGELETACGLFEGLPYKDVISWNTLIGGYTHMNLYKEALLLFQE 314
Query: 222 MRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLK--SGYNNEDPLDNLLVSMYTKC 279
M R TP+ V L+++ CA +G + + +H + K G N L L+ MY KC
Sbjct: 315 MLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVANASSLRTSLIDMYAKC 374
Query: 280 GDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTL 339
GD+E A +VF+++L KS+ W +MI G+A G + ++F R+ K + P++ T L
Sbjct: 375 GDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDIFSRMRKNGIEPDDITFVGLL 434
Query: 340 SACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLA 399
SAC+ G L G+ I + + ++ L H
Sbjct: 435 SACSHSGMLDLGRHI-----FRSMTQDYKMTPKLEH------------------------ 465
Query: 400 VWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKS 459
+ MI+ G+ +A + M+ ++PD V++ S+L AC G V+ G SF ++
Sbjct: 466 -YGCMIDLLGHSGLFKEAEEMINTME----MEPDGVIWCSLLKACKMHGNVELGESFAQN 520
Query: 460 MQSNFGIEP-SIEHYLCLVDLLGRAGRFD 487
+ IEP + Y+ L ++ AGR++
Sbjct: 521 L---IKIEPENPGSYVLLSNIYATAGRWN 546
>gi|356554981|ref|XP_003545819.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27110-like [Glycine max]
Length = 705
Score = 357 bits (916), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 194/598 (32%), Positives = 327/598 (54%), Gaps = 11/598 (1%)
Query: 6 TNNGSFEETLSTYSSMLQTG-VHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQD 64
T N + E L + +L + +S+T+P V KAC ++ GK +H+ ++K G D
Sbjct: 81 TKNYMYVEALELFEKLLHYPYLKPDSYTYPSVFKACGGLHRYVLGKMIHTCLIKTGLMMD 140
Query: 65 AFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEM 124
V + L+ MY KC+ F + + +EMP + V WN++IS + ++ +A+ M
Sbjct: 141 IVVGSSLVGMYGKCNAFEKAIWLFNEMPEK--DVACWNTVISCYYQSGNFKDALEYFGLM 198
Query: 125 WVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGK 180
G E ++ T + +S C+ +G+ +H + G L + ++++++ MY K G
Sbjct: 199 RRFGFEPNSVTITTAISSCARLLDLNRGMEIHEELINSGFLLDSF-ISSALVDMYGKCGH 257
Query: 181 VNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILG 240
+ A IF+++ + ++V+W ++I GY G++ L +M V P L +LI+
Sbjct: 258 LEMAIEIFEQMPKKTVVAWNSMISGYGLKGDIISCIQLFKRMYNEGVKPTLTTLSSLIMV 317
Query: 241 CAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLW 300
C++ L +H +++ + +++ L+ +Y KCG +ELA ++F + + V W
Sbjct: 318 CSRSARLLEGKFVHGYTIRNRIQPDVFVNSSLMDLYFKCGKVELAEKIFKLIPKSKVVSW 377
Query: 301 TSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVL 360
MI GY G EA+ LF + K+ V + T + L+AC++L +L KGKEI I+
Sbjct: 378 NVMISGYVAEGKLFEALGLFSEMRKSYVESDAITFTSVLTACSQLAALEKGKEIHNLIIE 437
Query: 361 NGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNL 420
L++N V +L+ M++KCG +++A VF+ +P +DL W++MI Y HG AL L
Sbjct: 438 KKLDNNEVVMGALLDMYAKCGAVDEAFSVFKCLPKRDLVSWTSMITAYGSHGHAYGALEL 497
Query: 421 FYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLL 480
F +M +KPD V + +ILSAC H+G+VD+G +F M + +GI P +EHY CL+DLL
Sbjct: 498 FAEMLQ-SNVKPDRVAFLAILSACGHAGLVDEGCYYFNQMINVYGIIPRVEHYSCLIDLL 556
Query: 481 GRAGRFDLALKTIHEMP-VEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNY 539
GRAGR A + + + P + ++ + L SAC H N++LG A+ L+ +P + Y
Sbjct: 557 GRAGRLHEAYEILQQNPEIRDDVELLSTLFSACRLHRNIDLGAEIARTLIDKDPDDSSTY 616
Query: 540 ILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSH-HLSV 596
IL++N++ SA W E R M + L K PG S +EI+ + F D SH HL +
Sbjct: 617 ILLSNMYASAHKWDEVRVVRSKMKELGLKKNPGCSWIEINQKILPFFVEDNSHLHLEL 674
Score = 226 bits (577), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 142/491 (28%), Positives = 248/491 (50%), Gaps = 22/491 (4%)
Query: 36 VLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEM--PV 93
+L+AC N S+ GK +H V+ +G Q D F+ LI+ Y C + ++ V D M P
Sbjct: 9 LLRACMNSKSLKQGKLIHQKVVTLGLQNDIFLCKTLINQYLSCHLYDHAKCVFDNMENPC 68
Query: 94 RLRSVVSWNSIISAHSRACLNDEAI-LVLKEMWVLGLELSASTFVSVVSGCS----FRQG 148
+ WN +++ +++ + EA+ L K + L+ + T+ SV C + G
Sbjct: 69 E---ISLWNGLMAGYTKNYMYVEALELFEKLLHYPYLKPDSYTYPSVFKACGGLHRYVLG 125
Query: 149 ISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVN 208
+H C+ K GL+ +I + +S++ MY K +A +F+E+ E + W T+I Y
Sbjct: 126 KMIHTCLIKTGLMM-DIVVGSSLVGMYGKCNAFEKAIWLFNEMPEKDVACWNTVISCYYQ 184
Query: 209 VGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPL 268
GN +A MRR P+ V I CA++ +L + +H L+ SG+ + +
Sbjct: 185 SGNFKDALEYFGLMRRFGFEPNSVTITTAISSCARLLDLNRGMEIHEELINSGFLLDSFI 244
Query: 269 DNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSV 328
+ LV MY KCG LE+A +F+ + +K+V W SMI GY G + LFKR+ V
Sbjct: 245 SSALVDMYGKCGHLEMAIEIFEQMPKKTVVAWNSMISGYGLKGDIISCIQLFKRMYNEGV 304
Query: 329 RPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKE 388
+P TL++ + C+ L +GK + Y + N ++ + V +SL+ ++ KCG++ A++
Sbjct: 305 KPTLTTLSSLIMVCSRSARLLEGKFVHGYTIRNRIQPDVFVNSSLMDLYFKCGKVELAEK 364
Query: 389 VFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSG 448
+F+ +P + W+ MI+GY G +AL LF +M+ ++ DA+ +TS+L+ACS
Sbjct: 365 IFKLIPKSKVVSWNVMISGYVAEGKLFEALGLFSEMRK-SYVESDAITFTSVLTACSQLA 423
Query: 449 MVDDGLSFFKSMQSNFGIEPSIEH----YLCLVDLLGRAGRFDLALKTIHEMPVEVQAQV 504
++ G N IE +++ L+D+ + G D A +P +
Sbjct: 424 ALEKGKEI-----HNLIIEKKLDNNEVVMGALLDMYAKCGAVDEAFSVFKCLP-KRDLVS 477
Query: 505 WAPLLSACMKH 515
W +++A H
Sbjct: 478 WTSMITAYGSH 488
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 76/249 (30%), Positives = 122/249 (48%), Gaps = 7/249 (2%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI G + + M GV T ++ C+ + +GK VH + ++
Sbjct: 279 MISGYGLKGDIISCIQLFKRMYNEGVKPTLTTLSSLIMVCSRSARLLEGKFVHGYTIRNR 338
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
Q D FV + L+D+Y KC + K+ +P VVSWN +IS + EA+ +
Sbjct: 339 IQPDVFVNSSLMDLYFKCGKVELAEKIFKLIPK--SKVVSWNVMISGYVAEGKLFEALGL 396
Query: 121 LKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
EM +E A TF SV++ CS +G +H + + L NNE+ + +++ MYA
Sbjct: 397 FSEMRKSYVESDAITFTSVLTACSQLAALEKGKEIHNLIIEKKLDNNEVVMG-ALLDMYA 455
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K G V+EA S+F + + +VSWT++I Y + G+ A L +M + +V PD V FL
Sbjct: 456 KCGAVDEAFSVFKCLPKRDLVSWTSMITAYGSHGHAYGALELFAEMLQSNVKPDRVAFLA 515
Query: 237 LILGCAQVG 245
++ C G
Sbjct: 516 ILSACGHAG 524
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 90/189 (47%), Gaps = 25/189 (13%)
Query: 335 LATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVP 394
L L AC SL +GK I + +V GL+++ + +LI+ + C + AK VF+ +
Sbjct: 6 LLPLLRACMNSKSLKQGKLIHQKVVTLGLQNDIFLCKTLINQYLSCHLYDHAKCVFDNME 65
Query: 395 DK-DLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACS-------- 445
+ ++++W+ ++ GY + M +AL LF K+ H LKPD+ Y S+ AC
Sbjct: 66 NPCEISLWNGLMAGYTKNYMYVEALELFEKLLHYPYLKPDSYTYPSVFKACGGLHRYVLG 125
Query: 446 ---HSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQA 502
H+ ++ GL + S+ LV + G+ F+ A+ +EMP E
Sbjct: 126 KMIHTCLIKTGLMMDIVVGSS------------LVGMYGKCNAFEKAIWLFNEMP-EKDV 172
Query: 503 QVWAPLLSA 511
W ++S
Sbjct: 173 ACWNTVISC 181
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 92/198 (46%), Gaps = 8/198 (4%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI G E L +S M ++ V ++ TF VL AC+ + ++ GK +H+ +++
Sbjct: 380 MISGYVAEGKLFEALGLFSEMRKSYVESDAITFTSVLTACSQLAALEKGKEIHNLIIEKK 439
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+ V L+DMY+KC + V +P R +VSW S+I+A+ A+ +
Sbjct: 440 LDNNEVVMGALLDMYAKCGAVDEAFSVFKCLPK--RDLVSWTSMITAYGSHGHAYGALEL 497
Query: 121 LKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGLLN-----NEIPLANSVMSMY 175
EM ++ F++++S C G+ C Y ++N + + ++ +
Sbjct: 498 FAEMLQSNVKPDRVAFLAILSACG-HAGLVDEGCYYFNQMINVYGIIPRVEHYSCLIDLL 556
Query: 176 AKFGKVNEARSIFDEIGE 193
+ G+++EA I + E
Sbjct: 557 GRAGRLHEAYEILQQNPE 574
>gi|449480302|ref|XP_004155856.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
Length = 654
Score = 357 bits (916), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 196/538 (36%), Positives = 314/538 (58%), Gaps = 16/538 (2%)
Query: 94 RLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSAS-----TFVSVVSGCS---- 144
R+ V++WNS++ A + + A+ EM LE S + TF S++ GC+
Sbjct: 39 RVLDVLTWNSMLRAFVNSNMPRRALQSYTEM----LERSRNVPDRFTFPSLLKGCALLLE 94
Query: 145 FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIG 204
F+ G +H V K +L++++ + ++++MYA G + AR +F+ +G + V WT++I
Sbjct: 95 FKVGKVLHGQVVKY-MLHSDLYIETTLLNMYAACGDLKSARFLFERMGHRNKVVWTSMIS 153
Query: 205 GYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNN 264
GY+ NEA L +M +PD V L+ CA++ +L + + +HS + +
Sbjct: 154 GYMKNHCPNEALLLYKKMEEDGFSPDEVTMATLVSACAELKDLGVGMKLHSHIREMDMKI 213
Query: 265 EDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLL 324
L + LV+MY KCGDL+ AR+VFD + +K V+ W+++I GY + +EA+ LF+ +
Sbjct: 214 CAVLGSALVNMYAKCGDLKTARQVFDQLSDKDVYAWSALIFGYVKNNRSTEALQLFREVA 273
Query: 325 KTS-VRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRI 383
S +RPNE T+ +SACA+LG L G+ + +YI + + SLI MFSKCG I
Sbjct: 274 GGSNMRPNEVTILAVISACAQLGDLETGRWVHDYITRTQKGHSVSLNNSLIDMFSKCGDI 333
Query: 384 NKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSA 443
+ AK +F+ + KDL W++M+NG A+HG+G +AL F+ MQ + L+PD + + +L+A
Sbjct: 334 DAAKRIFDSMSYKDLISWNSMVNGLALHGLGREALAQFHLMQTTD-LQPDEITFIGVLTA 392
Query: 444 CSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQ 503
CSH+G+V +G F +++ +G+ EHY C+VDLL RAG A + I MP++
Sbjct: 393 CSHAGLVQEGKKLFYEIEALYGVRLKSEHYGCMVDLLCRAGLLAEAREFIRVMPLQPDGA 452
Query: 504 VWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMD 563
+W +L AC ++N+ELGE AA+ LL L P + G YIL++N++ MW E R LM+
Sbjct: 453 IWGSMLGACRVYNNLELGEEAARCLLELEPTNDGVYILLSNIYARRKMWNEVKKVRELMN 512
Query: 564 DRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKELHIKLLEAGYIAEADIV 621
++ + K PG S V ID F+AGD SH +I L+++ KL GY+A+ V
Sbjct: 513 EKGIQKTPGCSSVVIDNIAHSFLAGDCSHPEIAEISIMLRQVREKLKLVGYVADTSEV 570
Score = 201 bits (511), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 122/436 (27%), Positives = 231/436 (52%), Gaps = 14/436 (3%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVH-GNSFTFPLVLKACANINSIWDGKRVHSHVLKV 59
M+R N+ L +Y+ ML+ + + FTFP +LK CA + GK +H V+K
Sbjct: 49 MLRAFVNSNMPRRALQSYTEMLERSRNVPDRFTFPSLLKGCALLLEFKVGKVLHGQVVKY 108
Query: 60 GFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAIL 119
D +++T L++MY+ C D S+R + + M R+ V W S+IS + + +EA+L
Sbjct: 109 MLHSDLYIETTLLNMYAACGDLKSARFLFERMG--HRNKVVWTSMISGYMKNHCPNEALL 166
Query: 120 VLKEMWVLGLELSASTFVSVVSGCSFRQ----GISMHCCVYKLGLLNNEIPLANSVMSMY 175
+ K+M G T ++VS C+ + G+ +H + ++ + + L +++++MY
Sbjct: 167 LYKKMEEDGFSPDEVTMATLVSACAELKDLGVGMKLHSHIREMDMKICAV-LGSALVNMY 225
Query: 176 AKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMS-VTPDLVVF 234
AK G + AR +FD++ + + +W+ +I GYV EA L ++ S + P+ V
Sbjct: 226 AKCGDLKTARQVFDQLSDKDVYAWSALIFGYVKNNRSTEALQLFREVAGGSNMRPNEVTI 285
Query: 235 LNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLE 294
L +I CAQ+G+L +H + ++ + L+N L+ M++KCGD++ A+R+FD++
Sbjct: 286 LAVISACAQLGDLETGRWVHDYITRTQKGHSVSLNNSLIDMFSKCGDIDAAKRIFDSMSY 345
Query: 295 KSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEI 354
K + W SM+ G A G EA+ F + T ++P+E T L+AC+ G + +GK++
Sbjct: 346 KDLISWNSMVNGLALHGLGREALAQFHLMQTTDLQPDEITFIGVLTACSHAGLVQEGKKL 405
Query: 355 -EEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVP-DKDLAVWSAMINGYAIHG 412
E L G+ + ++ + + G + +A+E +P D A+W +M+ ++
Sbjct: 406 FYEIEALYGVRLKSEHYGCMVDLLCRAGLLAEAREFIRVMPLQPDGAIWGSMLGACRVYN 465
Query: 413 ---MGDQALNLFYKMQ 425
+G++A +++
Sbjct: 466 NLELGEEAARCLLELE 481
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 83/345 (24%), Positives = 162/345 (46%), Gaps = 29/345 (8%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI N E L Y M + G + T ++ ACA + + G ++HSH+ ++
Sbjct: 151 MISGYMKNHCPNEALLLYKKMEEDGFSPDEVTMATLVSACAELKDLGVGMKLHSHIREMD 210
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+ A + + L++MY+KC D ++R+V D++ + V +W+++I + + + EA+ +
Sbjct: 211 MKICAVLGSALVNMYAKCGDLKTARQVFDQLSD--KDVYAWSALIFGYVKNNRSTEALQL 268
Query: 121 LKEMWVLG---LELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMS 173
+E V G + + T ++V+S C+ G +H + + + + L NS++
Sbjct: 269 FRE--VAGGSNMRPNEVTILAVISACAQLGDLETGRWVHDYITRTQ-KGHSVSLNNSLID 325
Query: 174 MYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVV 233
M++K G ++ A+ IFD + ++SW +++ G G EA + M+ + PD +
Sbjct: 326 MFSKCGDIDAAKRIFDSMSYKDLISWNSMVNGLALHGLGREALAQFHLMQTTDLQPDEIT 385
Query: 234 FLNLILGCAQVG------NLFLAL-SMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELAR 286
F+ ++ C+ G LF + +++ + LKS + +V + + G L AR
Sbjct: 386 FIGVLTACSHAGLVQEGKKLFYEIEALYGVRLKSEHY------GCMVDLLCRAGLLAEAR 439
Query: 287 RVFDAV-LEKSVFLWTSMIGG---YAQLGYPSEAVNLFKRLLKTS 327
+ L+ +W SM+G Y L EA L T+
Sbjct: 440 EFIRVMPLQPDGAIWGSMLGACRVYNNLELGEEAARCLLELEPTN 484
>gi|296083884|emb|CBI24272.3| unnamed protein product [Vitis vinifera]
Length = 729
Score = 357 bits (916), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 198/634 (31%), Positives = 335/634 (52%), Gaps = 52/634 (8%)
Query: 36 VLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRL 95
+L+ C + ++ G +VH+ ++ G F+ + L+++Y + +R++ D+M R
Sbjct: 16 ILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDKMSER- 74
Query: 96 RSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCS----FRQGISM 151
+V SW +I+ + +E I + M G+ F V CS +R G +
Sbjct: 75 -NVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKDV 133
Query: 152 HCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGN 211
+ + +G N + S++ M+ K G+++ AR F+EI + W ++ GY + G
Sbjct: 134 YDYMLSIGFEGNSC-VKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGE 192
Query: 212 VNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPL-DN 270
+A + +M V P+ + + + C + L +H +K + D L N
Sbjct: 193 FKKALNVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVGN 252
Query: 271 LLVSMYTKCGDLELARR------------------------------------------- 287
LV Y KC +E+ARR
Sbjct: 253 SLVDYYAKCRSVEVARRKFGMIKQTDLVSWNAMLAVTGFTQYGDGKAALEFFQRMHIACS 312
Query: 288 VFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGS 347
VF + + V +W S+I AQ G A++L + + ++V N T+ + L AC++L +
Sbjct: 313 VFSELSTRDVVVWNSIISACAQSGRSVNALDLLREMNLSNVEVNTVTMVSALPACSKLAA 372
Query: 348 LSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMING 407
L +GKEI ++I+ GL++ + SLI M+ +CG I K++ +F+ +P +DL W+ MI+
Sbjct: 373 LRQGKEIHQFIIRCGLDTCNFILNSLIDMYGRCGSIQKSRRIFDLMPQRDLVSWNVMISV 432
Query: 408 YAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIE 467
Y +HG G A+NLF + + + GLKP+ + +T++LSACSHSG++++G +FK M++ + ++
Sbjct: 433 YGMHGFGMDAVNLFQQFRTM-GLKPNHITFTNLLSACSHSGLIEEGWKYFKMMKTEYAMD 491
Query: 468 PSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKN 527
P++E Y C+VDLL RAG+F+ L+ I +MP E A VW LL AC H N +L EYAA+
Sbjct: 492 PAVEQYACMVDLLSRAGQFNETLEFIEKMPFEPNAAVWGSLLGACRIHCNPDLAEYAARY 551
Query: 528 LLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVA 587
L L P S+GNY+LMAN++++AG W++AA R LM +R +TK PG S +E+ + FV
Sbjct: 552 LFELEPQSSGNYVLMANIYSAAGRWEDAAKIRCLMKERGVTKPPGCSWIEVKRKLHSFVV 611
Query: 588 GDRSHHLSVDIRKTLKELHIKLLEAGYIAEADIV 621
GD SH L I ++ L+ + E GY+ + + V
Sbjct: 612 GDTSHPLMEQISAKMESLYFDIKEIGYVPDTNFV 645
Score = 188 bits (478), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 127/489 (25%), Positives = 236/489 (48%), Gaps = 60/489 (12%)
Query: 9 GSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQ 68
G +EET+ + M+ GV + F FP V KAC+ + + GK V+ ++L +GF+ ++ V+
Sbjct: 90 GDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKDVYDYMLSIGFEGNSCVK 149
Query: 69 TGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLG 128
++DM+ KC +R+ +E + + V WN ++S ++ +A+ V ++M + G
Sbjct: 150 GSILDMFIKCGRMDIARRFFEE--IEFKDVFMWNIMVSGYTSKGEFKKALNVFRKMVLEG 207
Query: 129 LELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEA 184
++ ++ T S VS C+ R G +H K+ L++++ + NS++ YAK V A
Sbjct: 208 VKPNSITIASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVGNSLVDYYAKCRSVEVA 267
Query: 185 RSIFDEIGETSIVSWTTIIG--GYVNVGNVNEAFGL-------CNQMRRMSVTPDLVVFL 235
R F I +T +VSW ++ G+ G+ A C+ +S T D+VV+
Sbjct: 268 RRKFGMIKQTDLVSWNAMLAVTGFTQYGDGKAALEFFQRMHIACSVFSELS-TRDVVVWN 326
Query: 236 NLILGCAQVGNLFLALSM-----------------------------------HSLLLKS 260
++I CAQ G AL + H +++
Sbjct: 327 SIISACAQSGRSVNALDLLREMNLSNVEVNTVTMVSALPACSKLAALRQGKEIHQFIIRC 386
Query: 261 GYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLF 320
G + + + N L+ MY +CG ++ +RR+FD + ++ + W MI Y G+ +AVNLF
Sbjct: 387 GLDTCNFILNSLIDMYGRCGSIQKSRRIFDLMPQRDLVSWNVMISVYGMHGFGMDAVNLF 446
Query: 321 KRLLKTSVRPNEATLATTLSACAELGSLSKG-KEIEEYIVLNGLESNRQVQTSLIHMFSK 379
++ ++PN T LSAC+ G + +G K + ++ + ++ + S+
Sbjct: 447 QQFRTMGLKPNHITFTNLLSACSHSGLIEEGWKYFKMMKTEYAMDPAVEQYACMVDLLSR 506
Query: 380 CGRINKAKEVFERVP-DKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDA---- 434
G+ N+ E E++P + + AVW +++ IH D A Y +++ L+P +
Sbjct: 507 AGQFNETLEFIEKMPFEPNAAVWGSLLGACRIHCNPDLAE---YAARYLFELEPQSSGNY 563
Query: 435 VVYTSILSA 443
V+ +I SA
Sbjct: 564 VLMANIYSA 572
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 103/338 (30%), Positives = 176/338 (52%), Gaps = 15/338 (4%)
Query: 136 FVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEI 191
+ S++ C + R G +H + G+ E L + ++ +Y + G V +AR +FD++
Sbjct: 13 YASILQKCRKLYNLRLGFQVHAQLVVNGVDVCEF-LGSRLLEVYCQTGCVEDARRMFDKM 71
Query: 192 GETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLAL 251
E ++ SWT I+ Y +G+ E L M V PD VF + C+++ N +
Sbjct: 72 SERNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGK 131
Query: 252 SMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLG 311
++ +L G+ + ++ M+ KCG +++ARR F+ + K VF+W M+ GY G
Sbjct: 132 DVYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKG 191
Query: 312 YPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEY-IVLNGLESNRQVQ 370
+A+N+F++++ V+PN T+A+ +SAC L L G+EI Y I + L+S+ V
Sbjct: 192 EFKKALNVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVG 251
Query: 371 TSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAM--INGYAIHGMGDQALNLFYKMQHV- 427
SL+ ++KC + A+ F + DL W+AM + G+ +G G AL F +M H+
Sbjct: 252 NSLVDYYAKCRSVEVARRKFGMIKQTDLVSWNAMLAVTGFTQYGDGKAALEFFQRM-HIA 310
Query: 428 -----EGLKPDAVVYTSILSACSHSGMVDDGLSFFKSM 460
E D VV+ SI+SAC+ SG + L + M
Sbjct: 311 CSVFSELSTRDVVVWNSIISACAQSGRSVNALDLLREM 348
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 76/227 (33%), Positives = 137/227 (60%), Gaps = 3/227 (1%)
Query: 229 PD--LVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELAR 286
PD + ++ +++ C ++ NL L +H+ L+ +G + + L + L+ +Y + G +E AR
Sbjct: 6 PDECIEIYASILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDAR 65
Query: 287 RVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELG 346
R+FD + E++VF WT+++ Y LG E + LF ++ VRP+ AC+EL
Sbjct: 66 RMFDKMSERNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELK 125
Query: 347 SLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMIN 406
+ GK++ +Y++ G E N V+ S++ MF KCGR++ A+ FE + KD+ +W+ M++
Sbjct: 126 NYRVGKDVYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVS 185
Query: 407 GYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDG 453
GY G +ALN+F KM +EG+KP+++ S +SAC++ ++ G
Sbjct: 186 GYTSKGEFKKALNVFRKMV-LEGVKPNSITIASAVSACTNLSLLRHG 231
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 110/438 (25%), Positives = 185/438 (42%), Gaps = 87/438 (19%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKV- 59
M+ T+ G F++ L+ + M+ GV NS T + AC N++ + G+ +H + +KV
Sbjct: 183 MVSGYTSKGEFKKALNVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIHGYCIKVE 242
Query: 60 GFQQDAFVQTGLIDMYSKC---------------SDFVSSRKVLD--------------E 90
D V L+D Y+KC +D VS +L E
Sbjct: 243 ELDSDLLVGNSLVDYYAKCRSVEVARRKFGMIKQTDLVSWNAMLAVTGFTQYGDGKAALE 302
Query: 91 MPVRL------------RSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVS 138
R+ R VV WNSIISA +++ + A+ +L+EM + +E++ T VS
Sbjct: 303 FFQRMHIACSVFSELSTRDVVVWNSIISACAQSGRSVNALDLLREMNLSNVEVNTVTMVS 362
Query: 139 VVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGET 194
+ CS RQG +H + + GL L NS++ MY + G + ++R IFD + +
Sbjct: 363 ALPACSKLAALRQGKEIHQFIIRCGLDTCNFIL-NSLIDMYGRCGSIQKSRRIFDLMPQR 421
Query: 195 SIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMH 254
+VSW +I Y G +A L Q R M + P+ + F NL+ C+ H
Sbjct: 422 DLVSWNVMISVYGMHGFGMDAVNLFQQFRTMGLKPNHITFTNLLSACS-----------H 470
Query: 255 SLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPS 314
S L++ G+ Y K E A ++ +V + M+ ++ G +
Sbjct: 471 SGLIEEGWK------------YFKMMKTEYA-------MDPAVEQYACMVDLLSRAGQFN 511
Query: 315 EAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLI 374
E + +++ PN A + L AC + ++ EY E Q + +
Sbjct: 512 ETLEFIEKM---PFEPNAAVWGSLLGAC----RIHCNPDLAEYAARYLFELEPQSSGNYV 564
Query: 375 HM---FSKCGRINKAKEV 389
M +S GR A ++
Sbjct: 565 LMANIYSAAGRWEDAAKI 582
>gi|449499218|ref|XP_004160754.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Cucumis sativus]
Length = 766
Score = 357 bits (916), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 198/617 (32%), Positives = 340/617 (55%), Gaps = 11/617 (1%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+I NG F + + M G+ + F + +L+ C ++SI G VH+ ++ G
Sbjct: 142 LIAGLAENGLFLDGFEFFCEMQSQGIFPDQFAYSGILQICIGLDSIELGNMVHAQIVIRG 201
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F FV T L++MY+K + S KV + M +VVSWN++I+ + L +A +
Sbjct: 202 FTSHTFVSTALLNMYAKLQEIEDSYKVFNTMTEV--NVVSWNAMITGFTSNDLYLDAFDL 259
Query: 121 LKEMWVLGLELSASTFVSVVSGCSFRQGIS----MHCCVYKLGLLNNEIPLANSVMSMYA 176
M G+ A TF+ V + ++ + +LG+ +N + + +++ M +
Sbjct: 260 FLRMMGEGVTPDAQTFIGVAKAIGMLRDVNKAKEVSGYALELGVDSNTL-VGTALIDMNS 318
Query: 177 KFGKVNEARSIFDE--IGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVF 234
K G + EARSIF+ I W +I GY+ G +A L +M + + D +
Sbjct: 319 KCGSLQEARSIFNSHFITCRFNAPWNAMISGYLRSGFNEKALELFAKMCQNDIYLDHYTY 378
Query: 235 LNLILGCAQVGNLFLALSMHSLLLKSGYN-NEDPLDNLLVSMYTKCGDLELARRVFDAVL 293
++ A + L L +H+ +KSG N + N + + Y KCG LE R+VF+ +
Sbjct: 379 CSVFNAIAALKCLSLGKKVHARAIKSGLEVNYVSISNAVANAYAKCGSLEDVRKVFNRME 438
Query: 294 EKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKE 353
++ + WTS++ Y+Q +A+ +F + + PN+ T ++ L +CA L L G++
Sbjct: 439 DRDLISWTSLVTAYSQCSEWDKAIEIFSNMRAEGIAPNQFTFSSVLVSCANLCLLEYGQQ 498
Query: 354 IEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGM 413
+ I GL+ ++ ++++L+ M++KCG + AK+VF R+ + D W+A+I G+A HG+
Sbjct: 499 VHGIICKVGLDMDKCIESALVDMYAKCGCLGDAKKVFNRISNADTVSWTAIIAGHAQHGI 558
Query: 414 GDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHY 473
D AL LF +M + G++P+AV + +L ACSH G+V++GL +FK M+ +G+ P +EHY
Sbjct: 559 VDDALQLFRRMVQL-GVEPNAVTFLCVLFACSHGGLVEEGLQYFKLMKKTYGLVPEMEHY 617
Query: 474 LCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNP 533
C+VDLL R G + A++ I MPVE VW LL AC H NVELGE AA+ +L+
Sbjct: 618 ACIVDLLSRVGHLNDAMEFISRMPVEPNEMVWQTLLGACRVHGNVELGELAAQKILSFKA 677
Query: 534 GSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHH 593
++ Y+L++N + +G +K+ + R +M ++ + KEPG S + ++G++ F AGD+ H
Sbjct: 678 ENSATYVLLSNTYIESGSYKDGLSLRHVMKEQGVKKEPGCSWISVNGTLHKFYAGDQQHP 737
Query: 594 LSVDIRKTLKELHIKLL 610
I L+EL +KL+
Sbjct: 738 EKDKIYAKLEELKLKLI 754
Score = 164 bits (416), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 118/494 (23%), Positives = 237/494 (47%), Gaps = 19/494 (3%)
Query: 34 PLV--LKACANINSIWDGKRVHSHVLKVGF--QQDAFVQTGLIDMYSKCSDFVSSRKVLD 89
PLV L+ C + + K VH +LK F + + YSKCSD ++ ++ D
Sbjct: 70 PLVDLLRDCVDARFLKQAKTVHGFLLKSKFSNHHSLVLLNHVAHAYSKCSDIDAACRLFD 129
Query: 90 EMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGC----SF 145
+M R+ SW +I+ + L + EM G+ + ++ C S
Sbjct: 130 QMS--QRNTFSWTVLIAGLAENGLFLDGFEFFCEMQSQGIFPDQFAYSGILQICIGLDSI 187
Query: 146 RQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGG 205
G +H + G ++ ++ ++++MYAK ++ ++ +F+ + E ++VSW +I G
Sbjct: 188 ELGNMVHAQIVIRGFTSHTF-VSTALLNMYAKLQEIEDSYKVFNTMTEVNVVSWNAMITG 246
Query: 206 YVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNE 265
+ + +AF L +M VTPD F+ + + ++ A + L+ G ++
Sbjct: 247 FTSNDLYLDAFDLFLRMMGEGVTPDAQTFIGVAKAIGMLRDVNKAKEVSGYALELGVDSN 306
Query: 266 DPLDNLLVSMYTKCGDLELARRVFDAVLEKSVF--LWTSMIGGYAQLGYPSEAVNLFKRL 323
+ L+ M +KCG L+ AR +F++ F W +MI GY + G+ +A+ LF ++
Sbjct: 307 TLVGTALIDMNSKCGSLQEARSIFNSHFITCRFNAPWNAMISGYLRSGFNEKALELFAKM 366
Query: 324 LKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNR-QVQTSLIHMFSKCGR 382
+ + + T + +A A L LS GK++ + +GLE N + ++ + ++KCG
Sbjct: 367 CQNDIYLDHYTYCSVFNAIAALKCLSLGKKVHARAIKSGLEVNYVSISNAVANAYAKCGS 426
Query: 383 INKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILS 442
+ ++VF R+ D+DL W++++ Y+ D+A+ +F M+ EG+ P+ ++S+L
Sbjct: 427 LEDVRKVFNRMEDRDLISWTSLVTAYSQCSEWDKAIEIFSNMR-AEGIAPNQFTFSSVLV 485
Query: 443 ACSHSGMVDDGLSFFKSM-QSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQ 501
+C++ +++ G + + ++ IE LVD+ + G A K + +
Sbjct: 486 SCANLCLLEYGQQVHGIICKVGLDMDKCIES--ALVDMYAKCGCLGDAKKVFNRIS-NAD 542
Query: 502 AQVWAPLLSACMKH 515
W +++ +H
Sbjct: 543 TVSWTAIIAGHAQH 556
>gi|302768409|ref|XP_002967624.1| hypothetical protein SELMODRAFT_169299 [Selaginella moellendorffii]
gi|300164362|gb|EFJ30971.1| hypothetical protein SELMODRAFT_169299 [Selaginella moellendorffii]
Length = 795
Score = 357 bits (915), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 194/628 (30%), Positives = 347/628 (55%), Gaps = 11/628 (1%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTF-PLVLKACANINSIWDGKRVHSHVLKV 59
+I T G F + + + ML +GV + TF ++LK ++ +GKRVHSH+++
Sbjct: 87 LISAFTFAGHFGDAMVLFRKMLLSGVSPDRITFTSILLKWSGRERNLDEGKRVHSHIMQT 146
Query: 60 GFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAIL 119
G++ D V +++MY KC D + V D ++ +V SW II+A+++ E +
Sbjct: 147 GYEGDRMVMNLVVEMYGKCGDVEQAGNVFDS--IQDPNVFSWTIIIAAYAQNGHCMEVLR 204
Query: 120 VLKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMY 175
+L M G++ TF +V+ C+ + +H L+ + + +++++Y
Sbjct: 205 LLSRMNQAGVKPDGYTFTTVLGACTAVGALEEAKILHAATISSTGLDRDAAVGTALINLY 264
Query: 176 AKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFL 235
K G + EA +F +I IVSW+++I + G A L M V P+ V F+
Sbjct: 265 GKCGALEEAFGVFVQIDNKDIVSWSSMIAAFAQSGQAKSAIQLLMLMDLEGVRPNNVTFV 324
Query: 236 NLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEK 295
N++ + +H+ ++++GY+++ L + LV MY G +E AR +F++ E+
Sbjct: 325 NVLEAVTSLKAFQYGKEIHARIVQAGYSDDVCLTSALVKMYCNWGWVETARSIFESSRER 384
Query: 296 SVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIE 355
V W+SMI GY+Q P+ A++LF+ + V+PN T + + ACA +G+L +G ++
Sbjct: 385 DVVSWSSMIAGYSQNESPARALSLFREMEVDGVQPNSVTFVSAIDACAGVGALRRGTQLH 444
Query: 356 EYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGD 415
E + GL+ + V T+L++++ KCGR+ +A+ VF + K+L W+++ Y +G G
Sbjct: 445 ERVRCLGLDKDVPVATALVNLYGKCGRLEEAEAVFLGMKKKNLLTWTSIAMAYGQNGHGS 504
Query: 416 QALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLC 475
++L L + M+ ++G+KPD +V+ +IL +C+++G + GL ++ M +FGI P++EH C
Sbjct: 505 RSLKLLHGME-LQGMKPDGIVFVAILVSCNYAGQMSKGLHYYNLMTQDFGIAPAVEHCGC 563
Query: 476 LVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGS 535
+VD+LGRAG+ + A + I+ M E + W LL+AC H++ AA+ + L P +
Sbjct: 564 MVDILGRAGKLEAAEQLINTMKFE-SSLAWMMLLTACKAHNDTARAARAAEKIFQLEPKN 622
Query: 536 TGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDR--SHH 593
Y+L++++F +AG W+ A R MD R + + G S +EI V FVA HH
Sbjct: 623 ATPYVLLSSVFCAAGSWEAAEETRRRMDGRGVQRLLGRSSIEIGDRVHEFVAASDVLPHH 682
Query: 594 LSVDIRKTLKELHIKLLEAGYIAEADIV 621
L +I L++L ++ AGY+ +A V
Sbjct: 683 LVGEIFAALEKLGREMQGAGYVPDATAV 710
Score = 225 bits (573), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 140/465 (30%), Positives = 244/465 (52%), Gaps = 16/465 (3%)
Query: 36 VLKACANINSIWDGKRVHSHVLKVGFQQD-----AFVQTGLIDMYSKCSDFVSSRKVLDE 90
+L AC+++ ++ +GKRVH V++ QD + ++ +I MY +C + V D
Sbjct: 16 ILTACSDLRALPEGKRVHGLVMRESLLQDERPDESLLENIVIQMYLRCGCTDLALDVFDR 75
Query: 91 MPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCSFR---- 146
M + ++VV+W S+ISA + A +A+++ ++M + G+ TF S++ S R
Sbjct: 76 M--KDQNVVAWTSLISAFTFAGHFGDAMVLFRKMLLSGVSPDRITFTSILLKWSGRERNL 133
Query: 147 -QGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGG 205
+G +H + + G + + + N V+ MY K G V +A ++FD I + ++ SWT II
Sbjct: 134 DEGKRVHSHIMQTGYEGDRMVM-NLVVEMYGKCGDVEQAGNVFDSIQDPNVFSWTIIIAA 192
Query: 206 YVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKS-GYNN 264
Y G+ E L ++M + V PD F ++ C VG L A +H+ + S G +
Sbjct: 193 YAQNGHCMEVLRLLSRMNQAGVKPDGYTFTTVLGACTAVGALEEAKILHAATISSTGLDR 252
Query: 265 EDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLL 324
+ + L+++Y KCG LE A VF + K + W+SMI +AQ G A+ L +
Sbjct: 253 DAAVGTALINLYGKCGALEEAFGVFVQIDNKDIVSWSSMIAAFAQSGQAKSAIQLLMLMD 312
Query: 325 KTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRIN 384
VRPN T L A L + GKEI IV G + + ++L+ M+ G +
Sbjct: 313 LEGVRPNNVTFVNVLEAVTSLKAFQYGKEIHARIVQAGYSDDVCLTSALVKMYCNWGWVE 372
Query: 385 KAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSAC 444
A+ +FE ++D+ WS+MI GY+ + +AL+LF +M+ V+G++P++V + S + AC
Sbjct: 373 TARSIFESSRERDVVSWSSMIAGYSQNESPARALSLFREME-VDGVQPNSVTFVSAIDAC 431
Query: 445 SHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLA 489
+ G + G + ++ G++ + LV+L G+ GR + A
Sbjct: 432 AGVGALRRGTQLHERVRC-LGLDKDVPVATALVNLYGKCGRLEEA 475
Score = 184 bits (468), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 104/327 (31%), Positives = 182/327 (55%), Gaps = 11/327 (3%)
Query: 129 LELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIP----LANSVMSMYAKFGK 180
++ S ++++ CS +G +H V + LL +E P L N V+ MY + G
Sbjct: 6 IQAEISACAAILTACSDLRALPEGKRVHGLVMRESLLQDERPDESLLENIVIQMYLRCGC 65
Query: 181 VNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILG 240
+ A +FD + + ++V+WT++I + G+ +A L +M V+PD + F +++L
Sbjct: 66 TDLALDVFDRMKDQNVVAWTSLISAFTFAGHFGDAMVLFRKMLLSGVSPDRITFTSILLK 125
Query: 241 -CAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFL 299
+ NL +HS ++++GY + + NL+V MY KCGD+E A VFD++ + +VF
Sbjct: 126 WSGRERNLDEGKRVHSHIMQTGYEGDRMVMNLVVEMYGKCGDVEQAGNVFDSIQDPNVFS 185
Query: 300 WTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIE-EYI 358
WT +I YAQ G+ E + L R+ + V+P+ T T L AC +G+L + K + I
Sbjct: 186 WTIIIAAYAQNGHCMEVLRLLSRMNQAGVKPDGYTFTTVLGACTAVGALEEAKILHAATI 245
Query: 359 VLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQAL 418
GL+ + V T+LI+++ KCG + +A VF ++ +KD+ WS+MI +A G A+
Sbjct: 246 SSTGLDRDAAVGTALINLYGKCGALEEAFGVFVQIDNKDIVSWSSMIAAFAQSGQAKSAI 305
Query: 419 NLFYKMQHVEGLKPDAVVYTSILSACS 445
L M +EG++P+ V + ++L A +
Sbjct: 306 QLLMLMD-LEGVRPNNVTFVNVLEAVT 331
>gi|4455294|emb|CAB36829.1| putative protein [Arabidopsis thaliana]
gi|7268069|emb|CAB78407.1| putative protein [Arabidopsis thaliana]
Length = 1024
Score = 357 bits (915), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 191/623 (30%), Positives = 339/623 (54%), Gaps = 12/623 (1%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+I + G E+ + + M G+ +S T ++ AC+ +++ G+++H++ K+G
Sbjct: 320 LINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLG 379
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLND--EAI 118
F + ++ L+++Y+KC+D ++ E V +VV WN ++ A+ L+D +
Sbjct: 380 FASNNKIEGALLNLYAKCADIETALDYFLETEVE--NVVLWNVMLVAY--GLLDDLRNSF 435
Query: 119 LVLKEMWVLGLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSM 174
+ ++M + + + T+ S++ C G +H + K N + + ++ M
Sbjct: 436 RIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAY-VCSVLIDM 494
Query: 175 YAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVF 234
YAK GK++ A I +VSWTT+I GY ++A QM + D V
Sbjct: 495 YAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGL 554
Query: 235 LNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLE 294
N + CA + L +H+ SG++++ P N LV++Y++CG +E + F+
Sbjct: 555 TNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEA 614
Query: 295 KSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEI 354
W +++ G+ Q G EA+ +F R+ + + N T + + A +E ++ +GK++
Sbjct: 615 GDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQV 674
Query: 355 EEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMG 414
I G +S +V +LI M++KCG I+ A++ F V K+ W+A+IN Y+ HG G
Sbjct: 675 HAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFG 734
Query: 415 DQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYL 474
+AL+ F +M H ++P+ V +LSACSH G+VD G+++F+SM S +G+ P EHY+
Sbjct: 735 SEALDSFDQMIH-SNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYV 793
Query: 475 CLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPG 534
C+VD+L RAG A + I EMP++ A VW LLSAC+ H N+E+GE+AA +LL L P
Sbjct: 794 CVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHKNMEIGEFAAHHLLELEPE 853
Query: 535 STGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHL 594
+ Y+L++NL+ + W R M ++ + KEPG S +E+ S+ F GD++H L
Sbjct: 854 DSATYVLLSNLYAVSKKWDARDLTRQKMKEKGVKKEPGQSWIEVKNSIHSFYVGDQNHPL 913
Query: 595 SVDIRKTLKELHIKLLEAGYIAE 617
+ +I + ++L + E GY+ +
Sbjct: 914 ADEIHEYFQDLTKRASEIGYVQD 936
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 138/493 (27%), Positives = 241/493 (48%), Gaps = 12/493 (2%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDG-KRVHSHVLKV 59
MI+ + E + M+ V N TF VL+AC + +D +++H+ +L
Sbjct: 117 MIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARILYQ 176
Query: 60 GFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAIL 119
G + V LID+YS+ +R+V D + RL+ SW ++IS S+ EAI
Sbjct: 177 GLRDSTVVCNPLIDLYSRNGFVDLARRVFDGL--RLKDHSSWVAMISGLSKNECEAEAIR 234
Query: 120 VLKEMWVLGLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMY 175
+ +M+VLG+ + F SV+S C S G +H V KLG +++ + N+++S+Y
Sbjct: 235 LFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGF-SSDTYVCNALVSLY 293
Query: 176 AKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFL 235
G + A IF + + V++ T+I G G +A L +M + PD
Sbjct: 294 FHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLA 353
Query: 236 NLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEK 295
+L++ C+ G LF +H+ K G+ + + ++ L+++Y KC D+E A F +
Sbjct: 354 SLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVE 413
Query: 296 SVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIE 355
+V LW M+ Y L + +F+++ + PN+ T + L C LG L G++I
Sbjct: 414 NVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIH 473
Query: 356 EYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGD 415
I+ + N V + LI M++K G+++ A ++ R KD+ W+ MI GY + D
Sbjct: 474 SQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDD 533
Query: 416 QALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFF-KSMQSNFGIEPSIEHYL 474
+AL F +M G++ D V T+ +SAC+ + +G ++ S F + ++
Sbjct: 534 KALTTFRQMLD-RGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQN-- 590
Query: 475 CLVDLLGRAGRFD 487
LV L R G+ +
Sbjct: 591 ALVTLYSRCGKIE 603
Score = 194 bits (494), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 129/493 (26%), Positives = 244/493 (49%), Gaps = 19/493 (3%)
Query: 6 TNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANIN-SIWDGKRVHSHVLKVGFQQD 64
+ + SF+E S+ G+ N T +L+ C N S+ +G+++HS +LK+G +
Sbjct: 22 SEDESFQE--KRIDSVENRGIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSN 79
Query: 65 AFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEM 124
+ L D Y D + KV DEMP R++ +WN +I + L E + M
Sbjct: 80 GCLSEKLFDFYLFKGDLYGAFKVFDEMPE--RTIFTWNKMIKELASRNLIGEVFGLFVRM 137
Query: 125 WVLGLELSASTFVSVVSGC-----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFG 179
+ + TF V+ C +F +H + GL ++ + + N ++ +Y++ G
Sbjct: 138 VSENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARILYQGLRDSTV-VCNPLIDLYSRNG 196
Query: 180 KVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLIL 239
V+ AR +FD + SW +I G EA L M + + P F +++
Sbjct: 197 FVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLS 256
Query: 240 GCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFL 299
C ++ +L + +H L+LK G++++ + N LVS+Y G+L A +F + ++
Sbjct: 257 ACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVT 316
Query: 300 WTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIV 359
+ ++I G +Q GY +A+ LFKR+ + P+ TLA+ + AC+ G+L +G+++ Y
Sbjct: 317 YNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTT 376
Query: 360 LNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALN 419
G SN +++ +L+++++KC I A + F +++ +W+ M+ Y + +
Sbjct: 377 KLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFR 436
Query: 420 LFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKS-MQSNFGIEPSIEHYLC--L 476
+F +MQ +E + P+ Y SIL C G ++ G +++NF + Y+C L
Sbjct: 437 IFRQMQ-IEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNA----YVCSVL 491
Query: 477 VDLLGRAGRFDLA 489
+D+ + G+ D A
Sbjct: 492 IDMYAKLGKLDTA 504
>gi|347954546|gb|AEP33773.1| organelle transcript processing 82, partial [Lobularia maritima]
Length = 695
Score = 357 bits (915), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 201/617 (32%), Positives = 339/617 (54%), Gaps = 54/617 (8%)
Query: 50 KRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMP--------VRLRSVVSW 101
+ +H+ ++K G + + LI+ F D +P ++ +++ W
Sbjct: 4 RMIHAQMIKTGLHNTNYALSKLIE-------FCVLSPHFDGLPYAISVFETIQEPNLLIW 56
Query: 102 NSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYK 157
N++ H+ + A+ + M LGL + TF ++ C+ FR+G +H V K
Sbjct: 57 NTMFRGHALSSDPVSALYLYVCMISLGLLPNCYTFPFLLKSCAKSKAFREGQQIHGHVLK 116
Query: 158 LGLLNNEIPLANSVMSMYAKFGKVNEARSIFD---------------------------- 189
LG + ++ + S++SMY + G++ +AR +FD
Sbjct: 117 LGY-DLDLYVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALITGYASKGYIASAQK 175
Query: 190 ---EIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGN 246
EI +VSW +I GY GN EA L +M + +V PD ++++ CAQ +
Sbjct: 176 MFDEIPIKDVVSWNAMISGYAETGNNKEALELFKEMMKTNVRPDESTMVSVVSACAQSAS 235
Query: 247 LFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGG 306
+ L +HS + G+ + + N L+ +Y KCG++E A +F+ + K V W ++IGG
Sbjct: 236 IELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETACGLFEGLSYKDVISWNTLIGG 295
Query: 307 YAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYI--VLNGLE 364
Y + EA+ LF+ +L++ PN+ T+ + L ACA LG++ G+ I YI L G+
Sbjct: 296 YTHMNLYKEALLLFQEMLRSGESPNDVTMLSILPACAHLGAIEIGRWIHVYINKRLKGVA 355
Query: 365 SNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKM 424
+ +TSLI M++KCG I A++VF+ + ++ L+ W+AMI G+A+HG + A ++F +M
Sbjct: 356 NASSHRTSLIDMYAKCGDIEAAQQVFDSILNRSLSSWNAMIFGFAMHGRANAAFDIFSRM 415
Query: 425 QHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAG 484
+ E ++PD + + +LSACSHSGM+D G F+SM+ ++ I P +EHY C++DLLG +G
Sbjct: 416 RKNE-IEPDDITFVGLLSACSHSGMLDLGRHIFRSMKEDYKITPKLEHYGCMIDLLGHSG 474
Query: 485 RFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMAN 544
F A + I+ M +E +W LL AC H NVELGE A+NL+ + P + G+Y+L++N
Sbjct: 475 LFKEAEEMINTMEMEPDGVIWCSLLKACKMHGNVELGESYAQNLIKIEPKNPGSYVLLSN 534
Query: 545 LFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKE 604
++ +AG W E A R L++D+ + K PG S +EID V F+ GD+ H + +I L+E
Sbjct: 535 IYATAGRWNEVAKIRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEE 594
Query: 605 LHIKLLEAGYIAEADIV 621
+ + L EAG++ + V
Sbjct: 595 MEVLLEEAGFVPDTSEV 611
Score = 223 bits (568), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 150/514 (29%), Positives = 248/514 (48%), Gaps = 74/514 (14%)
Query: 14 TLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLID 73
L Y M+ G+ N +TFP +LK+CA + +G+++H HVLK+G+ D +V T LI
Sbjct: 72 ALYLYVCMISLGLLPNCYTFPFLLKSCAKSKAFREGQQIHGHVLKLGYDLDLYVHTSLIS 131
Query: 74 MYSKCSDFVSSRKVLDEMPVR-----------------------------LRSVVSWNSI 104
MY + +RKV D+ R ++ VVSWN++
Sbjct: 132 MYVQNGRLEDARKVFDQSSHRDVVSYTALITGYASKGYIASAQKMFDEIPIKDVVSWNAM 191
Query: 105 ISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGC----SFRQGISMHCCVYKLGL 160
IS ++ N EA+ + KEM + ST VSVVS C S G +H + G
Sbjct: 192 ISGYAETGNNKEALELFKEMMKTNVRPDESTMVSVVSACAQSASIELGRQVHSWIDDHGF 251
Query: 161 LNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCN 220
+N + + N+++ +Y K G+V A +F+ + ++SW T+IGGY ++ EA L
Sbjct: 252 GSN-LKIVNALIDLYIKCGEVETACGLFEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQ 310
Query: 221 QMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLK--SGYNNEDPLDNLLVSMYTK 278
+M R +P+ V L+++ CA +G + + +H + K G N L+ MY K
Sbjct: 311 EMLRSGESPNDVTMLSILPACAHLGAIEIGRWIHVYINKRLKGVANASSHRTSLIDMYAK 370
Query: 279 CGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATT 338
CGD+E A++VFD++L +S+ W +MI G+A G + A ++F R+ K + P++ T
Sbjct: 371 CGDIEAAQQVFDSILNRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNEIEPDDITFVGL 430
Query: 339 LSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDL 398
LSAC+ G L G+ H+F KE ++ P L
Sbjct: 431 LSACSHSGMLDLGR----------------------HIF------RSMKEDYKITP--KL 460
Query: 399 AVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFK 458
+ MI+ G+ +A + M+ ++PD V++ S+L AC G V+ G S+ +
Sbjct: 461 EHYGCMIDLLGHSGLFKEAEEMINTME----MEPDGVIWCSLLKACKMHGNVELGESYAQ 516
Query: 459 SMQSNFGIEP-SIEHYLCLVDLLGRAGRFDLALK 491
++ IEP + Y+ L ++ AGR++ K
Sbjct: 517 NL---IKIEPKNPGSYVLLSNIYATAGRWNEVAK 547
>gi|356577722|ref|XP_003556972.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like [Glycine max]
Length = 820
Score = 356 bits (914), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 209/624 (33%), Positives = 335/624 (53%), Gaps = 15/624 (2%)
Query: 7 NNGSFEETLSTYSSMLQTG---VHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG-FQ 62
NN L T+ MLQ ++ N + F +L++C+N G + + +LK G F
Sbjct: 119 NNSMESRALLTFLHMLQCSRNIIYPNEYCFTALLRSCSNPLFFTTGLAIFAFLLKTGYFD 178
Query: 63 QDAFVQTGLIDMYSKCS-DFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVL 121
V LIDM++K D S+R V D+M + +++V+W +I+ +S+ L D+A+ +
Sbjct: 179 SHVCVGCALIDMFTKGGLDIQSARMVFDKM--QHKNLVTWTLMITRYSQLGLLDDAVDLF 236
Query: 122 KEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAK 177
+ V T S++S C F G +H V + GL + ++ + +++ MYAK
Sbjct: 237 CRLLVSEYTPDKFTLTSLLSACVELEFFSLGKQLHSWVIRSGLAS-DVFVGCTLVDMYAK 295
Query: 178 FGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNL 237
V +R IF+ + +++SWT +I GYV EA L M VTP+ F ++
Sbjct: 296 SAAVENSRKIFNTMLHHNVMSWTALISGYVQSRQEQEAIKLFCNMLHGHVTPNCFTFSSV 355
Query: 238 ILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSV 297
+ CA + + + +H +K G + + + N L++MY + G +E AR+ F+ + EK++
Sbjct: 356 LKACASLPDFGIGKQLHGQTIKLGLSTINCVGNSLINMYARSGTMECARKAFNILFEKNL 415
Query: 298 FLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEY 357
+ + A+ E+ N + T V + T A LS A +G++ KG++I
Sbjct: 416 ISYNTAADANAKALDSDESFN--HEVEHTGVGASPFTYACLLSGAACIGTIVKGEQIHAL 473
Query: 358 IVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQA 417
IV +G +N + +LI M+SKCG A +VF + +++ W+++I+G+A HG +A
Sbjct: 474 IVKSGFGTNLCINNALISMYSKCGNKEAALQVFNDMGYRNVITWTSIISGFAKHGFATKA 533
Query: 418 LNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLV 477
L LFY+M + G+KP+ V Y ++LSACSH G++D+ F SM N I P +EHY C+V
Sbjct: 534 LELFYEMLEI-GVKPNEVTYIAVLSACSHVGLIDEAWKHFNSMHYNHSISPRMEHYACMV 592
Query: 478 DLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTG 537
DLLGR+G A++ I+ MP + A VW L +C H N +LGE+AAK +L P
Sbjct: 593 DLLGRSGLLLEAIEFINSMPFDADALVWRTFLGSCRVHRNTKLGEHAAKKILEREPHDPA 652
Query: 538 NYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVD 597
YIL++NL+ S G W + A R M ++L KE G+S +E+D V F GD SH +
Sbjct: 653 TYILLSNLYASEGRWDDVAALRKSMKQKKLIKETGYSWIEVDNQVHKFHVGDTSHPQARK 712
Query: 598 IRKTLKELHIKLLEAGYIAEADIV 621
I L EL +K+ GYI D V
Sbjct: 713 IYDELDELALKIKNLGYIPNTDFV 736
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 127/490 (25%), Positives = 240/490 (48%), Gaps = 15/490 (3%)
Query: 35 LVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVR 94
L+LKAC ++ GK +H ++ G D+ + LI +YSKC D+ ++ + M
Sbjct: 44 LLLKACIRSGNLELGKLLHHKLIDSGLPLDSVLLNSLITLYSKCGDWENALSIFRNMGHH 103
Query: 95 LRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLEL---SASTFVSVVSGCS----FRQ 147
R +VSW++IIS + + A+L M + + F +++ CS F
Sbjct: 104 KRDLVSWSAIISCFANNSMESRALLTFLHMLQCSRNIIYPNEYCFTALLRSCSNPLFFTT 163
Query: 148 GISMHCCVYKLGLLNNEIPLANSVMSMYAKFG-KVNEARSIFDEIGETSIVSWTTIIGGY 206
G+++ + K G ++ + + +++ M+ K G + AR +FD++ ++V+WT +I Y
Sbjct: 164 GLAIFAFLLKTGYFDSHVCVGCALIDMFTKGGLDIQSARMVFDKMQHKNLVTWTLMITRY 223
Query: 207 VNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNED 266
+G +++A L ++ TPD +L+ C ++ L +HS +++SG ++
Sbjct: 224 SQLGLLDDAVDLFCRLLVSEYTPDKFTLTSLLSACVELEFFSLGKQLHSWVIRSGLASDV 283
Query: 267 PLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKT 326
+ LV MY K +E +R++F+ +L +V WT++I GY Q EA+ LF +L
Sbjct: 284 FVGCTLVDMYAKSAAVENSRKIFNTMLHHNVMSWTALISGYVQSRQEQEAIKLFCNMLHG 343
Query: 327 SVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKA 386
V PN T ++ L ACA L GK++ + GL + V SLI+M+++ G + A
Sbjct: 344 HVTPNCFTFSSVLKACASLPDFGIGKQLHGQTIKLGLSTINCVGNSLINMYARSGTMECA 403
Query: 387 KEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSH 446
++ F + +K+L ++ + A D++ N ++++H G+ Y +LS +
Sbjct: 404 RKAFNILFEKNLISYNTAADANAKALDSDESFN--HEVEHT-GVGASPFTYACLLSGAAC 460
Query: 447 SGMVDDGLSFFKSM-QSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVW 505
G + G + +S FG I + L+ + + G + AL+ ++M W
Sbjct: 461 IGTIVKGEQIHALIVKSGFGTNLCINN--ALISMYSKCGNKEAALQVFNDMGYR-NVITW 517
Query: 506 APLLSACMKH 515
++S KH
Sbjct: 518 TSIISGFAKH 527
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 133/475 (28%), Positives = 233/475 (49%), Gaps = 29/475 (6%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI + G ++ + + +L + + FT +L AC + GK++HS V++ G
Sbjct: 219 MITRYSQLGLLDDAVDLFCRLLVSEYTPDKFTLTSLLSACVELEFFSLGKQLHSWVIRSG 278
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
D FV L+DMY+K + +SRK+ + M +V+SW ++IS + ++ EAI +
Sbjct: 279 LASDVFVGCTLVDMYAKSAAVENSRKIFNTM--LHHNVMSWTALISGYVQSRQEQEAIKL 336
Query: 121 LKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
M + + TF SV+ C+ F G +H KLGL + NS+++MYA
Sbjct: 337 FCNMLHGHVTPNCFTFSSVLKACASLPDFGIGKQLHGQTIKLGLSTINC-VGNSLINMYA 395
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
+ G + AR F+ + E +++S+ T + +E+F +++ V +
Sbjct: 396 RSGTMECARKAFNILFEKNLISYNTAADANAKALDSDESFN--HEVEHTGVGASPFTYAC 453
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
L+ G A +G + +H+L++KSG+ ++N L+SMY+KCG+ E A +VF+ + ++
Sbjct: 454 LLSGAACIGTIVKGEQIHALIVKSGFGTNLCINNALISMYSKCGNKEAALQVFNDMGYRN 513
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEE 356
V WTS+I G+A+ G+ ++A+ LF +L+ V+PNE T LSAC+ +G + E
Sbjct: 514 VITWTSIISGFAKHGFATKALELFYEMLEIGVKPNEVTYIAVLSACSHVGLID-----EA 568
Query: 357 YIVLNGLESNRQVQTSLIH------MFSKCGRINKAKEVFERVP-DKDLAVWSAMINGYA 409
+ N + N + + H + + G + +A E +P D D VW +
Sbjct: 569 WKHFNSMHYNHSISPRMEHYACMVDLLGRSGLLLEAIEFINSMPFDADALVWRTFLGSCR 628
Query: 410 IH---GMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQ 461
+H +G+ A K+ E P + S L A G DD + KSM+
Sbjct: 629 VHRNTKLGEHAAK---KILEREPHDPATYILLSNLYA--SEGRWDDVAALRKSMK 678
Score = 102 bits (253), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 71/227 (31%), Positives = 119/227 (52%), Gaps = 8/227 (3%)
Query: 225 MSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLEL 284
++ T L+ L+ C + GNL L +H L+ SG + L N L+++Y+KCGD E
Sbjct: 33 LTTTSPLIKSSLLLKACIRSGNLELGKLLHHKLIDSGLPLDSVLLNSLITLYSKCGDWEN 92
Query: 285 ARRVFDAV--LEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTS---VRPNEATLATTL 339
A +F + ++ + W+++I +A S A+ F +L+ S + PNE L
Sbjct: 93 ALSIFRNMGHHKRDLVSWSAIISCFANNSMESRALLTFLHMLQCSRNIIYPNEYCFTALL 152
Query: 340 SACAELGSLSKGKEIEEYIVLNG-LESNRQVQTSLIHMFSKCG-RINKAKEVFERVPDKD 397
+C+ + G I +++ G +S+ V +LI MF+K G I A+ VF+++ K+
Sbjct: 153 RSCSNPLFFTTGLAIFAFLLKTGYFDSHVCVGCALIDMFTKGGLDIQSARMVFDKMQHKN 212
Query: 398 LAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSAC 444
L W+ MI Y+ G+ D A++LF ++ V PD TS+LSAC
Sbjct: 213 LVTWTLMITRYSQLGLLDDAVDLFCRLL-VSEYTPDKFTLTSLLSAC 258
>gi|11994503|dbj|BAB02568.1| unnamed protein product [Arabidopsis thaliana]
Length = 1161
Score = 356 bits (914), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 199/559 (35%), Positives = 325/559 (58%), Gaps = 23/559 (4%)
Query: 71 LIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDE---AILVLKEMWVL 127
LIDMY KC + + + KV D MP R +VVSW++++S H LN + ++ + EM
Sbjct: 418 LIDMYCKCREPLMAYKVFDSMPER--NVVSWSALMSGH---VLNGDLKGSLSLFSEMGRQ 472
Query: 128 GLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNE 183
G+ + TF + + C + +G+ +H K+G + + NS++ MY+K G++NE
Sbjct: 473 GIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGF-EMMVEVGNSLVDMYSKCGRINE 531
Query: 184 ARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVT--PDLVVFLNLILGC 241
A +F I + S++SW +I G+V+ G ++A M+ ++ PD +L+ C
Sbjct: 532 AEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKAC 591
Query: 242 AQVGNLFLALSMHSLLLKSGYN--NEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFL 299
+ G ++ +H L++SG++ + + LV +Y KCG L AR+ FD + EK++
Sbjct: 592 SSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMIS 651
Query: 300 WTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIV 359
W+S+I GYAQ G EA+ LFKRL + + + + L++ + A+ L +GK+++ V
Sbjct: 652 WSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQALAV 711
Query: 360 L--NGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQA 417
+GLE++ V S++ M+ KCG +++A++ F + KD+ W+ +I GY HG+G ++
Sbjct: 712 KLPSGLETS--VLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKS 769
Query: 418 LNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLV 477
+ +FY+M ++PD V Y ++LSACSHSGM+ +G F + GI+P +EHY C+V
Sbjct: 770 VRIFYEMLR-HNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVEHYACVV 828
Query: 478 DLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTG 537
DLLGRAGR A I MP++ +W LLS C H ++ELG+ K LL ++ +
Sbjct: 829 DLLGRAGRLKEAKHLIDTMPIKPNVGIWQTLLSLCRVHGDIELGKEVGKILLRIDAKNPA 888
Query: 538 NYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVD 597
NY++M+NL+ AG W E AR L + + L KE G S VEI+ V F +G+ SH L+
Sbjct: 889 NYVMMSNLYGQAGYWNEQGNARELGNIKGLKKEAGMSWVEIEREVHFFRSGEDSHPLTPV 948
Query: 598 IRKTLKELHIKLLEA-GYI 615
I++TLKE +L E GY+
Sbjct: 949 IQETLKEAERRLREELGYV 967
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 115/414 (27%), Positives = 210/414 (50%), Gaps = 11/414 (2%)
Query: 8 NGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFV 67
NG + +LS +S M + G++ N FTF LKAC +N++ G ++H LK+GF+ V
Sbjct: 456 NGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEV 515
Query: 68 QTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVL 127
L+DMYSKC + KV + RS++SWN++I+ A +A+ M
Sbjct: 516 GNSLVDMYSKCGRINEAEKVFRR--IVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEA 573
Query: 128 GLELSASTF--VSVVSGCS----FRQGISMHCCVYKLGL-LNNEIPLANSVMSMYAKFGK 180
++ F S++ CS G +H + + G + + S++ +Y K G
Sbjct: 574 NIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGY 633
Query: 181 VNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILG 240
+ AR FD+I E +++SW+++I GY G EA GL +++ ++ D ++I
Sbjct: 634 LFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGV 693
Query: 241 CAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLW 300
A L M +L +K E + N +V MY KCG ++ A + F + K V W
Sbjct: 694 FADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISW 753
Query: 301 TSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEI-EEYIV 359
T +I GY + G ++V +F +L+ ++ P+E LSAC+ G + +G+E+ + +
Sbjct: 754 TVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLE 813
Query: 360 LNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDK-DLAVWSAMINGYAIHG 412
+G++ + ++ + + GR+ +AK + + +P K ++ +W +++ +HG
Sbjct: 814 THGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIKPNVGIWQTLLSLCRVHG 867
Score = 165 bits (418), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 102/357 (28%), Positives = 190/357 (53%), Gaps = 17/357 (4%)
Query: 168 ANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSV 227
+N ++ MY K + A +FD + E ++VSW+ ++ G+V G++ + L ++M R +
Sbjct: 415 SNYLIDMYCKCREPLMAYKVFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGI 474
Query: 228 TPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARR 287
P+ F + C + L L +H LK G+ + N LV MY+KCG + A +
Sbjct: 475 YPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEK 534
Query: 288 VFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSV--RPNEATLATTLSACAEL 345
VF ++++S+ W +MI G+ GY S+A++ F + + ++ RP+E TL + L AC+
Sbjct: 535 VFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSST 594
Query: 346 GSLSKGKEIEEYIVLNGLE--SNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSA 403
G + GK+I ++V +G S+ + SL+ ++ KCG + A++ F+++ +K + WS+
Sbjct: 595 GMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSS 654
Query: 404 MINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQS- 462
+I GYA G +A+ LF ++Q + + D+ +SI+ + ++ G K MQ+
Sbjct: 655 LILGYAQEGEFVEAMGLFKRLQELNS-QIDSFALSSIIGVFADFALLRQG----KQMQAL 709
Query: 463 ----NFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKH 515
G+E S+ + +VD+ + G D A K EM ++ W +++ KH
Sbjct: 710 AVKLPSGLETSVLN--SVVDMYLKCGLVDEAEKCFAEMQLK-DVISWTVVITGYGKH 763
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 40/208 (19%), Positives = 95/208 (45%), Gaps = 7/208 (3%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+I G F E + + + + +SF ++ A+ + GK++ + +K+
Sbjct: 655 LILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLP 714
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+ V ++DMY KC + K EM +L+ V+SW +I+ + + L +++ +
Sbjct: 715 SGLETSVLNSVVDMYLKCGLVDEAEKCFAEM--QLKDVISWTVVITGYGKHGLGKKSVRI 772
Query: 121 LKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
EM +E +++V+S CS ++G + + + + + V+ +
Sbjct: 773 FYEMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVEHYACVVDLLG 832
Query: 177 KFGKVNEARSIFDEIG-ETSIVSWTTII 203
+ G++ EA+ + D + + ++ W T++
Sbjct: 833 RAGRLKEAKHLIDTMPIKPNVGIWQTLL 860
>gi|225456755|ref|XP_002268980.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74600,
chloroplastic [Vitis vinifera]
gi|297733984|emb|CBI15231.3| unnamed protein product [Vitis vinifera]
Length = 893
Score = 356 bits (914), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 196/562 (34%), Positives = 316/562 (56%), Gaps = 8/562 (1%)
Query: 18 YSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSK 77
+ M + G N++T VL AC I + ++HS + K GF D+ V + LI+MYSK
Sbjct: 337 FKEMRKVGEKINNYTITSVLTACTEPVMIKEAVQLHSWIFKTGFYLDSNVSSALINMYSK 396
Query: 78 CSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGL---ELSAS 134
S +V EM +++ W +ISA +++ A+ + + M GL + +S
Sbjct: 397 IGVVDLSERVFREME-STKNLAMWAVMISAFAQSGSTGRAVELFQRMLQEGLRPDKFCSS 455
Query: 135 TFVSVVSGCSFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGET 194
+ +S++ S G +HC + K+GL +I + +S+ +MY+K G + E+ ++F+++ +
Sbjct: 456 SVLSIIDSLSL--GRLIHCYILKIGLFT-DISVGSSLFTMYSKCGSLEESYTVFEQMPDK 512
Query: 195 SIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMH 254
VSW ++I G+ + +A L +M + PD + + C+ + +L +H
Sbjct: 513 DNVSWASMITGFSEHDHAEQAVQLFREMLLEEIRPDQMTLTAALTACSALHSLEKGKEVH 572
Query: 255 SLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPS 314
L++ E + LV+MY+KCG + LARRVFD + +K F +S++ GYAQ GY
Sbjct: 573 GYALRARVGKEVLVGGALVNMYSKCGAIVLARRVFDMLPQKDQFSCSSLVSGYAQNGYIE 632
Query: 315 EAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLI 374
+A+ LF + + + T+++ + A A L SL G ++ + GL + V +SL+
Sbjct: 633 DALLLFHEIRMADLWIDSFTVSSVIGAVAILNSLDIGTQLHACVTKMGLNAEVSVGSSLV 692
Query: 375 HMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDA 434
M+SKCG I++ +VFE++ DL W+AMI YA HG G +AL + Y + EG KPD+
Sbjct: 693 TMYSKCGSIDECHKVFEQIEKPDLISWTAMIVSYAQHGKGAEALKV-YDLMRKEGTKPDS 751
Query: 435 VVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIH 494
V + +LSACSH+GMV++G S SM +GIEP HY C+VDLLGR+GR A + I+
Sbjct: 752 VTFVGVLSACSHNGMVEEGYSHLNSMAKEYGIEPGYYHYACMVDLLGRSGRLKEAERFIN 811
Query: 495 EMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKE 554
MP+E A +W LL+AC H ++ELG AAK ++ L P G Y+ ++N+ G W++
Sbjct: 812 NMPIEPDALLWGILLAACKVHGDIELGRLAAKRVIELEPCEAGAYVTLSNICADMGWWED 871
Query: 555 AATARGLMDDRRLTKEPGWSQV 576
R LM+ + KEPGWS V
Sbjct: 872 VMKIRSLMEGTGVKKEPGWSSV 893
Score = 226 bits (577), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 150/507 (29%), Positives = 272/507 (53%), Gaps = 15/507 (2%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+I N SFE++ + M +G N FT+ VL AC + S G+ V+S LK G
Sbjct: 118 LISGCNQNFSFEDSWRNFCKMRFSGFDPNQFTYGSVLSACTALGSPLYGELVYSLALKNG 177
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F + +V+ G+ID+++K F + +V + V +VV WN+IIS + N A+ +
Sbjct: 178 FFSNGYVRAGMIDLFAKLCSFEDALRVFQD--VLCENVVCWNAIISGAVKNRENWVALDL 235
Query: 121 LKEMWVLGLELSASTFVSVVSGCSFRQ----GISMHCCVYKLGLLNNEIPLANSVMSMYA 176
+M ++ TF S+++ C+ + G + V K G ++ + +++ +YA
Sbjct: 236 FCQMCCRFFMPNSFTFSSILTACAALEELEFGRGVQGWVIKCG-AGEDVFVGTAIIDLYA 294
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K +++A F + ++VSWTTII G+V + AF +MR++ + +
Sbjct: 295 KCRDMDQAVKEFLRMPIRNVVSWTTIISGFVQKDDSISAFHFFKEMRKVGEKINNYTITS 354
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLE-K 295
++ C + + A+ +HS + K+G+ + + + L++MY+K G ++L+ RVF + K
Sbjct: 355 VLTACTEPVMIKEAVQLHSWIFKTGFYLDSNVSSALINMYSKIGVVDLSERVFREMESTK 414
Query: 296 SVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIE 355
++ +W MI +AQ G AV LF+R+L+ +RP++ ++ LS + SLS G+ I
Sbjct: 415 NLAMWAVMISAFAQSGSTGRAVELFQRMLQEGLRPDKFCSSSVLSI---IDSLSLGRLIH 471
Query: 356 EYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGD 415
YI+ GL ++ V +SL M+SKCG + ++ VFE++PDKD W++MI G++ H +
Sbjct: 472 CYILKIGLFTDISVGSSLFTMYSKCGSLEESYTVFEQMPDKDNVSWASMITGFSEHDHAE 531
Query: 416 QALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFK-SMQSNFGIEPSIEHYL 474
QA+ LF +M +E ++PD + T+ L+ACS ++ G ++++ G E +
Sbjct: 532 QAVQLFREML-LEEIRPDQMTLTAALTACSALHSLEKGKEVHGYALRARVGKEVLVGG-- 588
Query: 475 CLVDLLGRAGRFDLALKTIHEMPVEVQ 501
LV++ + G LA + +P + Q
Sbjct: 589 ALVNMYSKCGAIVLARRVFDMLPQKDQ 615
Score = 224 bits (572), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 161/573 (28%), Positives = 287/573 (50%), Gaps = 59/573 (10%)
Query: 29 NSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVL 88
NSFTF +L ACA + + G+ V V+K G +D FV T +ID+Y+KC D + K
Sbjct: 247 NSFTFSSILTACAALEELEFGRGVQGWVIKCGAGEDVFVGTAIIDLYAKCRDMDQAVKEF 306
Query: 89 DEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCS---- 144
MP+ R+VVSW +IIS + + A KEM +G +++ T SV++ C+
Sbjct: 307 LRMPI--RNVVSWTTIISGFVQKDDSISAFHFFKEMRKVGEKINNYTITSVLTACTEPVM 364
Query: 145 FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGET-SIVSWTTII 203
++ + +H ++K G + +++++++MY+K G V+ + +F E+ T ++ W +I
Sbjct: 365 IKEAVQLHSWIFKTGFYLDS-NVSSALINMYSKIGVVDLSERVFREMESTKNLAMWAVMI 423
Query: 204 GGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYN 263
+ G+ A L +M + + PD +++ + + +L L +H +LK G
Sbjct: 424 SAFAQSGSTGRAVELFQRMLQEGLRPDKFCSSSVL---SIIDSLSLGRLIHCYILKIGLF 480
Query: 264 NEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRL 323
+ + + L +MY+KCG LE + VF+ + +K W SMI G+++ + +AV LF+ +
Sbjct: 481 TDISVGSSLFTMYSKCGSLEESYTVFEQMPDKDNVSWASMITGFSEHDHAEQAVQLFREM 540
Query: 324 LKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRI 383
L +RP++ TL L+AC+ L SL KGKE+ Y + + V +L++M+SKCG I
Sbjct: 541 LLEEIRPDQMTLTAALTACSALHSLEKGKEVHGYALRARVGKEVLVGGALVNMYSKCGAI 600
Query: 384 NKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVE--------------- 428
A+ VF+ +P KD S++++GYA +G + AL LF++++ +
Sbjct: 601 VLARRVFDMLPQKDQFSCSSLVSGYAQNGYIEDALLLFHEIRMADLWIDSFTVSSVIGAV 660
Query: 429 -------------------GLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPS 469
GL + V +S+++ S G +D+ F+ ++ +P
Sbjct: 661 AILNSLDIGTQLHACVTKMGLNAEVSVGSSLVTMYSKCGSIDECHKVFEQIE-----KPD 715
Query: 470 IEHYLCLVDLLGRAGRFDLALKTIHEMPVE---VQAQVWAPLLSACMKHHNVELGEYAAK 526
+ + ++ + G+ ALK M E + + +LSAC + VE G Y+
Sbjct: 716 LISWTAMIVSYAQHGKGAEALKVYDLMRKEGTKPDSVTFVGVLSACSHNGMVEEG-YSHL 774
Query: 527 NLLT----LNPGSTGNYILMANLFTSAGMWKEA 555
N + + PG +Y M +L +G KEA
Sbjct: 775 NSMAKEYGIEPGYY-HYACMVDLLGRSGRLKEA 806
Score = 155 bits (393), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 119/478 (24%), Positives = 222/478 (46%), Gaps = 19/478 (3%)
Query: 50 KRVHSHVLKVG-FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAH 108
K +H+H LK Q + F+ L+ Y K + V + ++ D+ P +V+SWN +IS
Sbjct: 65 KILHAHFLKTAILQSNTFMTNSLMGWYCKSNSMVHALRLFDKTP--HPNVISWNILISGC 122
Query: 109 SRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGLLNNEIP-- 166
++ +++ +M G + + T+ SV+S C+ VY L L N
Sbjct: 123 NQNFSFEDSWRNFCKMRFSGFDPNQFTYGSVLSACTALGSPLYGELVYSLALKNGFFSNG 182
Query: 167 -LANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRM 225
+ ++ ++AK +A +F ++ ++V W II G V A L QM
Sbjct: 183 YVRAGMIDLFAKLCSFEDALRVFQDVLCENVVCWNAIISGAVKNRENWVALDLFCQMCCR 242
Query: 226 SVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELA 285
P+ F +++ CA + L + ++K G + + ++ +Y KC D++ A
Sbjct: 243 FFMPNSFTFSSILTACAALEELEFGRGVQGWVIKCGAGEDVFVGTAIIDLYAKCRDMDQA 302
Query: 286 RRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAEL 345
+ F + ++V WT++I G+ Q A + FK + K + N T+ + L+AC E
Sbjct: 303 VKEFLRMPIRNVVSWTTIISGFVQKDDSISAFHFFKEMRKVGEKINNYTITSVLTACTEP 362
Query: 346 GSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVF-ERVPDKDLAVWSAM 404
+ + ++ +I G + V ++LI+M+SK G ++ ++ VF E K+LA+W+ M
Sbjct: 363 VMIKEAVQLHSWIFKTGFYLDSNVSSALINMYSKIGVVDLSERVFREMESTKNLAMWAVM 422
Query: 405 INGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQS-- 462
I+ +A G +A+ LF +M EGL+PD +S+LS + D LS + +
Sbjct: 423 ISAFAQSGSTGRAVELFQRMLQ-EGLRPDKFCSSSVLS-------IIDSLSLGRLIHCYI 474
Query: 463 -NFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVE 519
G+ I L + + G + + +MP + WA +++ +H + E
Sbjct: 475 LKIGLFTDISVGSSLFTMYSKCGSLEESYTVFEQMPDKDNVS-WASMITGFSEHDHAE 531
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 88/370 (23%), Positives = 185/370 (50%), Gaps = 4/370 (1%)
Query: 143 CSFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTI 202
C+ R +H K +L + + NS+M Y K + A +FD+ +++SW +
Sbjct: 59 CTLRNTKILHAHFLKTAILQSNTFMTNSLMGWYCKSNSMVHALRLFDKTPHPNVISWNIL 118
Query: 203 IGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGY 262
I G + +++ +MR P+ + +++ C +G+ ++SL LK+G+
Sbjct: 119 ISGCNQNFSFEDSWRNFCKMRFSGFDPNQFTYGSVLSACTALGSPLYGELVYSLALKNGF 178
Query: 263 NNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKR 322
+ + ++ ++ K E A RVF VL ++V W ++I G + A++LF +
Sbjct: 179 FSNGYVRAGMIDLFAKLCSFEDALRVFQDVLCENVVCWNAIISGAVKNRENWVALDLFCQ 238
Query: 323 LLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGR 382
+ PN T ++ L+ACA L L G+ ++ +++ G + V T++I +++KC
Sbjct: 239 MCCRFFMPNSFTFSSILTACAALEELEFGRGVQGWVIKCGAGEDVFVGTAIIDLYAKCRD 298
Query: 383 INKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILS 442
+++A + F R+P +++ W+ +I+G+ A + F +M+ V G K + TS+L+
Sbjct: 299 MDQAVKEFLRMPIRNVVSWTTIISGFVQKDDSISAFHFFKEMRKV-GEKINNYTITSVLT 357
Query: 443 ACSHSGMVDDGLSFFKSM-QSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQ 501
AC+ M+ + + + ++ F ++ ++ L+++ + G DL+ + EM
Sbjct: 358 ACTEPVMIKEAVQLHSWIFKTGFYLDSNVSS--ALINMYSKIGVVDLSERVFREMESTKN 415
Query: 502 AQVWAPLLSA 511
+WA ++SA
Sbjct: 416 LAMWAVMISA 425
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 73/144 (50%), Gaps = 2/144 (1%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
++ NG E+ L + + + +SFT V+ A A +NS+ G ++H+ V K+G
Sbjct: 621 LVSGYAQNGYIEDALLLFHEIRMADLWIDSFTVSSVIGAVAILNSLDIGTQLHACVTKMG 680
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+ V + L+ MYSKC KV ++ + ++SW ++I ++++ EA+ V
Sbjct: 681 LNAEVSVGSSLVTMYSKCGSIDECHKVFEQ--IEKPDLISWTAMIVSYAQHGKGAEALKV 738
Query: 121 LKEMWVLGLELSASTFVSVVSGCS 144
M G + + TFV V+S CS
Sbjct: 739 YDLMRKEGTKPDSVTFVGVLSACS 762
>gi|15234831|ref|NP_194799.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75208664|sp|Q9SUH6.1|PP341_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g30700; AltName: Full=Protein DYW9
gi|5725434|emb|CAB52443.1| putative protein [Arabidopsis thaliana]
gi|7269971|emb|CAB79788.1| putative protein [Arabidopsis thaliana]
gi|332660398|gb|AEE85798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 792
Score = 356 bits (914), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 196/626 (31%), Positives = 341/626 (54%), Gaps = 13/626 (2%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQ-TGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKV 59
++R + N S +LS ++ + + T + NS T+ + A + G+ +H +
Sbjct: 89 LMRGFSVNESPHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGRVIHGQAVVD 148
Query: 60 GFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAIL 119
G + + + ++ MY K +RKV D MP + + WN++IS + + + E+I
Sbjct: 149 GCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEK--DTILWNTMISGYRKNEMYVESIQ 206
Query: 120 VLKEMWVLG-LELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSM 174
V +++ L +T + ++ + R G+ +H K G +++ L +S+
Sbjct: 207 VFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTG-FISL 265
Query: 175 YAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVF 234
Y+K GK+ ++F E + IV++ +I GY + G + L ++
Sbjct: 266 YSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTL 325
Query: 235 LNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLE 294
++L+ G+L L ++H LKS + + + L ++Y+K ++E AR++FD E
Sbjct: 326 VSLV---PVSGHLMLIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPE 382
Query: 295 KSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEI 354
KS+ W +MI GY Q G +A++LF+ + K+ PN T+ LSACA+LG+LS GK +
Sbjct: 383 KSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWV 442
Query: 355 EEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMG 414
+ + ES+ V T+LI M++KCG I +A+ +F+ + K+ W+ MI+GY +HG G
Sbjct: 443 HDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQG 502
Query: 415 DQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYL 474
+ALN+FY+M + G+ P V + +L ACSH+G+V +G F SM +G EPS++HY
Sbjct: 503 QEALNIFYEMLN-SGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYA 561
Query: 475 CLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPG 534
C+VD+LGRAG AL+ I M +E + VW LL AC H + L ++ L L+P
Sbjct: 562 CMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLGACRIHKDTNLARTVSEKLFELDPD 621
Query: 535 STGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHL 594
+ G ++L++N+ ++ + +AAT R R+L K PG++ +EI + VF +GD+SH
Sbjct: 622 NVGYHVLLSNIHSADRNYPQAATVRQTAKKRKLAKAPGYTLIEIGETPHVFTSGDQSHPQ 681
Query: 595 SVDIRKTLKELHIKLLEAGYIAEADI 620
+I + L++L K+ EAGY E ++
Sbjct: 682 VKEIYEKLEKLEGKMREAGYQPETEL 707
Score = 47.0 bits (110), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 55/106 (51%), Gaps = 2/106 (1%)
Query: 347 SLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMIN 406
S+S + I+L+G ++ + T L S G I A+++F V D+ +++ ++
Sbjct: 32 SISHLAQTHAQIILHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNVLMR 91
Query: 407 GYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDD 452
G++++ +L++F ++ LKP++ Y +SA SG DD
Sbjct: 92 GFSVNESPHSSLSVFAHLRKSTDLKPNSSTYAFAISAA--SGFRDD 135
>gi|225447376|ref|XP_002274886.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Vitis vinifera]
Length = 736
Score = 356 bits (914), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 199/617 (32%), Positives = 325/617 (52%), Gaps = 20/617 (3%)
Query: 12 EETLSTYS-SMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG-FQQDAFVQT 69
E L Y + LQ G SFT N S G+++H+H++ + + ++ T
Sbjct: 49 EHPLQQYPLTSLQCGALLQSFT---------NTKSFKQGQQLHAHMISFSILENNTYLNT 99
Query: 70 GLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGL 129
L Y+ C + + D + L++ WN +I ++ L +++++ +EM G
Sbjct: 100 KLAAFYAGCGLMSQAEVIFD--GIVLKNSFLWNFMIRGYASNGLPMKSLVLYREMLCFGQ 157
Query: 130 ELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEAR 185
T+ V+ C G +H V GL ++I + NS+++MYAKFG + AR
Sbjct: 158 RADNFTYPFVLKACGDLLLVEIGRRVHSEVVVCGL-ESDIYVGNSLLAMYAKFGDMGTAR 216
Query: 186 SIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVG 245
+FD + E + SW T+I GY + AF + + M + + D L L+ CA +
Sbjct: 217 MVFDRMAERDLTSWNTMISGYAKNADSGTAFLVFDLMGKAGLFADCTTLLGLLSACADLK 276
Query: 246 NLFLALSMHSLLLKSGYNNEDPL-DNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMI 304
+ +H +++ N + N L+ MY C + ARR+F+ V K W SMI
Sbjct: 277 AVKEGKVIHGYAVRNSIGNYNKFFTNSLIEMYCNCNCMVDARRLFERVRWKDTVSWNSMI 336
Query: 305 GGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLE 364
GYA+ G E++ LF+R+ P++ T L AC ++ +L G I Y+V G +
Sbjct: 337 LGYARNGDAFESLRLFRRMALDGSGPDQVTFIAVLGACDQIAALRYGMSIHSYLVKKGFD 396
Query: 365 SNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKM 424
+N V T+L+ M+SKCG + ++ VF+ +PDK L WSAM+ GY +HG G +A+++ M
Sbjct: 397 ANTIVGTALVDMYSKCGSLACSRRVFDEMPDKSLVSWSAMVAGYGLHGRGREAISILDGM 456
Query: 425 QHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAG 484
+ + PD V+TSILSACSH+G+V +G F M+ + ++P++ HY C+VDLLGRAG
Sbjct: 457 K-ANSVIPDNGVFTSILSACSHAGLVVEGKEIFYKMEKEYNVKPALSHYSCMVDLLGRAG 515
Query: 485 RFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMAN 544
D A I M ++ + +WA LL+A H N++L E +A+ + +NP +YI ++N
Sbjct: 516 HLDEAYVIIRTMEIKPTSDIWAALLTASRLHKNIKLAEISAQKVFDMNPKVVSSYICLSN 575
Query: 545 LFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKE 604
++ + W + R ++ + L K PG S +E+D V F+ GD+SH + DI L E
Sbjct: 576 IYAAEKRWDDVERVRAMVRRKGLKKSPGCSFIELDNMVHRFLVGDKSHQQTEDIYAKLNE 635
Query: 605 LHIKLLEAGYIAEADIV 621
L +L EAGY + +V
Sbjct: 636 LKQQLKEAGYKPDTSLV 652
Score = 216 bits (549), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 128/422 (30%), Positives = 217/422 (51%), Gaps = 18/422 (4%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MIR +NG ++L Y ML G ++FT+P VLKAC ++ + G+RVHS V+ G
Sbjct: 132 MIRGYASNGLPMKSLVLYREMLCFGQRADNFTYPFVLKACGDLLLVEIGRRVHSEVVVCG 191
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+ D +V L+ MY+K D ++R V D M R + SWN++IS +++ + A LV
Sbjct: 192 LESDIYVGNSLLAMYAKFGDMGTARMVFDRMAE--RDLTSWNTMISGYAKNADSGTAFLV 249
Query: 121 LKEMWVLGLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
M GL +T + ++S C + ++G +H + + N NS++ MY
Sbjct: 250 FDLMGKAGLFADCTTLLGLLSACADLKAVKEGKVIHGYAVRNSIGNYNKFFTNSLIEMYC 309
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
+ +AR +F+ + VSW ++I GY G+ E+ L +M PD V F+
Sbjct: 310 NCNCMVDARRLFERVRWKDTVSWNSMILGYARNGDAFESLRLFRRMALDGSGPDQVTFIA 369
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
++ C Q+ L +S+HS L+K G++ + LV MY+KCG L +RRVFD + +KS
Sbjct: 370 VLGACDQIAALRYGMSIHSYLVKKGFDANTIVGTALVDMYSKCGSLACSRRVFDEMPDKS 429
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEE 356
+ W++M+ GY G EA+++ + SV P+ + LSAC+ G + +GKEI
Sbjct: 430 LVSWSAMVAGYGLHGRGREAISILDGMKANSVIPDNGVFTSILSACSHAGLVVEGKEI-- 487
Query: 357 YIVLNGLESNRQVQTSLIH------MFSKCGRINKAKEVFERVPDKDLA-VWSAMINGYA 409
+E V+ +L H + + G +++A + + K + +W+A++
Sbjct: 488 ---FYKMEKEYNVKPALSHYSCMVDLLGRAGHLDEAYVIIRTMEIKPTSDIWAALLTASR 544
Query: 410 IH 411
+H
Sbjct: 545 LH 546
>gi|347954522|gb|AEP33761.1| organelle transcript processing 82, partial [Crucihimalaya
wallichii]
Length = 710
Score = 356 bits (914), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 203/631 (32%), Positives = 345/631 (54%), Gaps = 57/631 (9%)
Query: 36 VLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMP--- 92
+L C + S+ + +H+ ++K G + + LI+ F D +P
Sbjct: 8 LLHNCKTLQSL---RMIHAQMIKTGLHNTNYALSKLIE-------FCVLSPHFDGLPYAI 57
Query: 93 -----VRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCS--- 144
++ +++ WN++ H+ + A+ + M LGL + TF ++ C+
Sbjct: 58 SVFETIQEPNLLIWNTMFRGHALSSDPVSALYLYVCMISLGLLPNCYTFPFLLKSCAKSK 117
Query: 145 -FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFD-------------- 189
FR+G +H V KLG + ++ + S++SMY + G++ +AR +FD
Sbjct: 118 AFREGQQIHGHVLKLGY-DLDLYVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALI 176
Query: 190 -----------------EIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLV 232
EI +VSW +I GY GN EA L +M + +V PD
Sbjct: 177 TGYASKGYIASAQKMFDEIPIKDVVSWNAMISGYAETGNNKEALELFKEMMKTNVRPDES 236
Query: 233 VFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAV 292
++++ CAQ ++ L +HS + G+ + + N L+ +Y KCG++E A +F+ +
Sbjct: 237 TMVSVVSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETACGLFEGL 296
Query: 293 LEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGK 352
K V W ++IGGY + EA+ LF+ +L++ PN+ T+ + L ACA LG++ G+
Sbjct: 297 SYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSILPACAHLGAIEIGR 356
Query: 353 EIEEYI--VLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAI 410
I YI L G+ + +TSLI M++KCG I A++VF+ + ++ L+ W+AMI G+A+
Sbjct: 357 WIHVYINKRLKGVANASSHRTSLIDMYAKCGDIEAAQQVFDSILNRSLSSWNAMIFGFAM 416
Query: 411 HGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSI 470
HG + A ++F +M+ E ++PD + + +LSACSHSGM+D G F+SM+ ++ I P +
Sbjct: 417 HGRANAAFDIFSRMRKNE-IEPDDITFVGLLSACSHSGMLDLGRHIFRSMKEDYKITPKL 475
Query: 471 EHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLT 530
EHY C++DLLG +G F A + I+ M +E +W LL AC + NVELGE A+NL+
Sbjct: 476 EHYGCMIDLLGHSGLFKEAEEMINTMEMEPDGVIWCSLLKACKMYANVELGESYAQNLIK 535
Query: 531 LNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDR 590
+ P + G+Y+L++N++ +AG W E A R L++D+ + K PG S +EID V F+ GD+
Sbjct: 536 IEPKNPGSYVLLSNIYATAGRWNEVAKIRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDK 595
Query: 591 SHHLSVDIRKTLKELHIKLLEAGYIAEADIV 621
H + +I L+E+ + L EAG++ + V
Sbjct: 596 FHPRNREIYGMLEEMEVLLEEAGFVPDTSEV 626
Score = 220 bits (561), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 149/513 (29%), Positives = 247/513 (48%), Gaps = 74/513 (14%)
Query: 15 LSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDM 74
L Y M+ G+ N +TFP +LK+CA + +G+++H HVLK+G+ D +V T LI M
Sbjct: 88 LYLYVCMISLGLLPNCYTFPFLLKSCAKSKAFREGQQIHGHVLKLGYDLDLYVHTSLISM 147
Query: 75 YSKCSDFVSSRKVLDEMPVR-----------------------------LRSVVSWNSII 105
Y + +RKV D+ R ++ VVSWN++I
Sbjct: 148 YVQNGRLEDARKVFDQSSHRDVVSYTALITGYASKGYIASAQKMFDEIPIKDVVSWNAMI 207
Query: 106 SAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLL 161
S ++ N EA+ + KEM + ST VSVVS C S G +H + G
Sbjct: 208 SGYAETGNNKEALELFKEMMKTNVRPDESTMVSVVSACAQSASIELGRQVHSWIDDHGFG 267
Query: 162 NNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQ 221
+N + + N+++ +Y K G+V A +F+ + ++SW T+IGGY ++ EA L +
Sbjct: 268 SN-LKIVNALIDLYIKCGEVETACGLFEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQE 326
Query: 222 MRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLK--SGYNNEDPLDNLLVSMYTKC 279
M R +P+ V L+++ CA +G + + +H + K G N L+ MY KC
Sbjct: 327 MLRSGESPNDVTMLSILPACAHLGAIEIGRWIHVYINKRLKGVANASSHRTSLIDMYAKC 386
Query: 280 GDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTL 339
GD+E A++VFD++L +S+ W +MI G+A G + A ++F R+ K + P++ T L
Sbjct: 387 GDIEAAQQVFDSILNRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNEIEPDDITFVGLL 446
Query: 340 SACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLA 399
SAC+ G L G+ H+F KE ++ P L
Sbjct: 447 SACSHSGMLDLGR----------------------HIF------RSMKEDYKITP--KLE 476
Query: 400 VWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKS 459
+ MI+ G+ +A + M+ ++PD V++ S+L AC V+ G S+ ++
Sbjct: 477 HYGCMIDLLGHSGLFKEAEEMINTME----MEPDGVIWCSLLKACKMYANVELGESYAQN 532
Query: 460 MQSNFGIEP-SIEHYLCLVDLLGRAGRFDLALK 491
+ IEP + Y+ L ++ AGR++ K
Sbjct: 533 L---IKIEPKNPGSYVLLSNIYATAGRWNEVAK 562
>gi|15228265|ref|NP_190368.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207726|sp|Q9STS9.1|PP268_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g47840
gi|4741201|emb|CAB41867.1| putative protein [Arabidopsis thaliana]
gi|332644818|gb|AEE78339.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 706
Score = 356 bits (914), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 209/617 (33%), Positives = 330/617 (53%), Gaps = 14/617 (2%)
Query: 3 RNSTNNGSFEETLSTYSSM--LQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
R T N S +E L +S+M + V ++ +VLKAC ++I G+ +H++ +K
Sbjct: 80 RYVTANNS-DEALILFSAMRVVDHAVSPDTSVLSVVLKACGQSSNIAYGESLHAYAVKTS 138
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+V + L+DMY + S +V EMP R+ V+W +II+ A E +
Sbjct: 139 LLSSVYVGSSLLDMYKRVGKIDKSCRVFSEMP--FRNAVTWTAIITGLVHAGRYKEGLTY 196
Query: 121 LKEMWVLGLELSAS-TFVSVVSGCS-FRQ---GISMHCCVYKLGLLNNEIPLANSVMSMY 175
EM ELS + TF + C+ RQ G ++H V G + + +ANS+ +MY
Sbjct: 197 FSEM-SRSEELSDTYTFAIALKACAGLRQVKYGKAIHTHVIVRGFVTT-LCVANSLATMY 254
Query: 176 AKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFL 235
+ G++ + +F+ + E +VSWT++I Y +G +A +MR V P+ F
Sbjct: 255 TECGEMQDGLCLFENMSERDVVSWTSLIVAYKRIGQEVKAVETFIKMRNSQVPPNEQTFA 314
Query: 236 NLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEK 295
++ CA + L +H +L G N+ + N ++ MY+ CG+L A +F + +
Sbjct: 315 SMFSACASLSRLVWGEQLHCNVLSLGLNDSLSVSNSMMKMYSTCGNLVSASVLFQGMRCR 374
Query: 296 SVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIE 355
+ W+++IGGY Q G+ E F + ++ +P + LA+ LS + + G+++
Sbjct: 375 DIISWSTIIGGYCQAGFGEEGFKYFSWMRQSGTKPTDFALASLLSVSGNMAVIEGGRQVH 434
Query: 356 EYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGD 415
+ GLE N V++SLI+M+SKCG I +A +F D+ +AMINGYA HG
Sbjct: 435 ALALCFGLEQNSTVRSSLINMYSKCGSIKEASMIFGETDRDDIVSLTAMINGYAEHGKSK 494
Query: 416 QALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLC 475
+A++LF K V G +PD+V + S+L+AC+HSG +D G +F MQ + + P+ EHY C
Sbjct: 495 EAIDLFEKSLKV-GFRPDSVTFISVLTACTHSGQLDLGFHYFNMMQETYNMRPAKEHYGC 553
Query: 476 LVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGS 535
+VDLL RAGR A K I+EM + VW LL AC ++E G AA+ +L L+P
Sbjct: 554 MVDLLCRAGRLSDAEKMINEMSWKKDDVVWTTLLIACKAKGDIERGRRAAERILELDPTC 613
Query: 536 TGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLS 595
+ +AN+++S G +EAA R M + + KEPGWS ++I V FV+GDR H S
Sbjct: 614 ATALVTLANIYSSTGNLEEAANVRKNMKAKGVIKEPGWSSIKIKDCVSAFVSGDRFHPQS 673
Query: 596 VDIRKTLKELHIKLLEA 612
DI L EL + EA
Sbjct: 674 EDIYNIL-ELAVSGAEA 689
Score = 181 bits (460), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 116/408 (28%), Positives = 209/408 (51%), Gaps = 11/408 (2%)
Query: 83 SSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFV--SVV 140
++R+V D+MP +VSW SII + A +DEA+++ M V+ +S T V V+
Sbjct: 58 AARQVFDKMP--HGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHAVSPDTSVLSVVL 115
Query: 141 SGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSI 196
C + G S+H K LL++ + + +S++ MY + GK++++ +F E+ +
Sbjct: 116 KACGQSSNIAYGESLHAYAVKTSLLSS-VYVGSSLLDMYKRVGKIDKSCRVFSEMPFRNA 174
Query: 197 VSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSL 256
V+WT II G V+ G E ++M R D F + CA + + ++H+
Sbjct: 175 VTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQVKYGKAIHTH 234
Query: 257 LLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEA 316
++ G+ + N L +MYT+CG+++ +F+ + E+ V WTS+I Y ++G +A
Sbjct: 235 VIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDVVSWTSLIVAYKRIGQEVKA 294
Query: 317 VNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHM 376
V F ++ + V PNE T A+ SACA L L G+++ ++ GL + V S++ M
Sbjct: 295 VETFIKMRNSQVPPNEQTFASMFSACASLSRLVWGEQLHCNVLSLGLNDSLSVSNSMMKM 354
Query: 377 FSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVV 436
+S CG + A +F+ + +D+ WS +I GY G G++ F M+ G KP
Sbjct: 355 YSTCGNLVSASVLFQGMRCRDIISWSTIIGGYCQAGFGEEGFKYFSWMRQ-SGTKPTDFA 413
Query: 437 YTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAG 484
S+LS + +++ G ++ FG+E + L+++ + G
Sbjct: 414 LASLLSVSGNMAVIEGGRQ-VHALALCFGLEQNSTVRSSLINMYSKCG 460
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 77/269 (28%), Positives = 140/269 (52%), Gaps = 3/269 (1%)
Query: 179 GKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRM--SVTPDLVVFLN 236
G + AR +FD++ IVSWT+II YV N +EA L + MR + +V+PD V
Sbjct: 54 GNLRAARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHAVSPDTSVLSV 113
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
++ C Q N+ S+H+ +K+ + + + L+ MY + G ++ + RVF + ++
Sbjct: 114 VLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSCRVFSEMPFRN 173
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEE 356
WT++I G G E + F + ++ + T A L ACA L + GK I
Sbjct: 174 AVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQVKYGKAIHT 233
Query: 357 YIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQ 416
++++ G + V SL M+++CG + +FE + ++D+ W+++I Y G +
Sbjct: 234 HVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDVVSWTSLIVAYKRIGQEVK 293
Query: 417 ALNLFYKMQHVEGLKPDAVVYTSILSACS 445
A+ F KM++ + + P+ + S+ SAC+
Sbjct: 294 AVETFIKMRNSQ-VPPNEQTFASMFSACA 321
>gi|42566761|ref|NP_193101.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635639|sp|Q9SVP7.2|PP307_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g13650
gi|332657909|gb|AEE83309.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 1064
Score = 356 bits (913), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 191/623 (30%), Positives = 339/623 (54%), Gaps = 12/623 (1%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+I + G E+ + + M G+ +S T ++ AC+ +++ G+++H++ K+G
Sbjct: 360 LINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLG 419
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLND--EAI 118
F + ++ L+++Y+KC+D ++ E V +VV WN ++ A+ L+D +
Sbjct: 420 FASNNKIEGALLNLYAKCADIETALDYFLETEVE--NVVLWNVMLVAY--GLLDDLRNSF 475
Query: 119 LVLKEMWVLGLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSM 174
+ ++M + + + T+ S++ C G +H + K N + + ++ M
Sbjct: 476 RIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAY-VCSVLIDM 534
Query: 175 YAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVF 234
YAK GK++ A I +VSWTT+I GY ++A QM + D V
Sbjct: 535 YAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGL 594
Query: 235 LNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLE 294
N + CA + L +H+ SG++++ P N LV++Y++CG +E + F+
Sbjct: 595 TNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEA 654
Query: 295 KSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEI 354
W +++ G+ Q G EA+ +F R+ + + N T + + A +E ++ +GK++
Sbjct: 655 GDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQV 714
Query: 355 EEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMG 414
I G +S +V +LI M++KCG I+ A++ F V K+ W+A+IN Y+ HG G
Sbjct: 715 HAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFG 774
Query: 415 DQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYL 474
+AL+ F +M H ++P+ V +LSACSH G+VD G+++F+SM S +G+ P EHY+
Sbjct: 775 SEALDSFDQMIH-SNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYV 833
Query: 475 CLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPG 534
C+VD+L RAG A + I EMP++ A VW LLSAC+ H N+E+GE+AA +LL L P
Sbjct: 834 CVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHKNMEIGEFAAHHLLELEPE 893
Query: 535 STGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHL 594
+ Y+L++NL+ + W R M ++ + KEPG S +E+ S+ F GD++H L
Sbjct: 894 DSATYVLLSNLYAVSKKWDARDLTRQKMKEKGVKKEPGQSWIEVKNSIHSFYVGDQNHPL 953
Query: 595 SVDIRKTLKELHIKLLEAGYIAE 617
+ +I + ++L + E GY+ +
Sbjct: 954 ADEIHEYFQDLTKRASEIGYVQD 976
Score = 204 bits (518), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 138/493 (27%), Positives = 241/493 (48%), Gaps = 12/493 (2%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDG-KRVHSHVLKV 59
MI+ + E + M+ V N TF VL+AC + +D +++H+ +L
Sbjct: 157 MIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARILYQ 216
Query: 60 GFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAIL 119
G + V LID+YS+ +R+V D + RL+ SW ++IS S+ EAI
Sbjct: 217 GLRDSTVVCNPLIDLYSRNGFVDLARRVFDGL--RLKDHSSWVAMISGLSKNECEAEAIR 274
Query: 120 VLKEMWVLGLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMY 175
+ +M+VLG+ + F SV+S C S G +H V KLG +++ + N+++S+Y
Sbjct: 275 LFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGF-SSDTYVCNALVSLY 333
Query: 176 AKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFL 235
G + A IF + + V++ T+I G G +A L +M + PD
Sbjct: 334 FHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLA 393
Query: 236 NLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEK 295
+L++ C+ G LF +H+ K G+ + + ++ L+++Y KC D+E A F +
Sbjct: 394 SLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVE 453
Query: 296 SVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIE 355
+V LW M+ Y L + +F+++ + PN+ T + L C LG L G++I
Sbjct: 454 NVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIH 513
Query: 356 EYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGD 415
I+ + N V + LI M++K G+++ A ++ R KD+ W+ MI GY + D
Sbjct: 514 SQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDD 573
Query: 416 QALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFF-KSMQSNFGIEPSIEHYL 474
+AL F +M G++ D V T+ +SAC+ + +G ++ S F + ++
Sbjct: 574 KALTTFRQMLD-RGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQN-- 630
Query: 475 CLVDLLGRAGRFD 487
LV L R G+ +
Sbjct: 631 ALVTLYSRCGKIE 643
Score = 194 bits (494), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 129/493 (26%), Positives = 244/493 (49%), Gaps = 19/493 (3%)
Query: 6 TNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANIN-SIWDGKRVHSHVLKVGFQQD 64
+ + SF+E S+ G+ N T +L+ C N S+ +G+++HS +LK+G +
Sbjct: 62 SEDESFQE--KRIDSVENRGIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSN 119
Query: 65 AFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEM 124
+ L D Y D + KV DEMP R++ +WN +I + L E + M
Sbjct: 120 GCLSEKLFDFYLFKGDLYGAFKVFDEMPE--RTIFTWNKMIKELASRNLIGEVFGLFVRM 177
Query: 125 WVLGLELSASTFVSVVSGC-----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFG 179
+ + TF V+ C +F +H + GL ++ + + N ++ +Y++ G
Sbjct: 178 VSENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARILYQGLRDSTV-VCNPLIDLYSRNG 236
Query: 180 KVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLIL 239
V+ AR +FD + SW +I G EA L M + + P F +++
Sbjct: 237 FVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLS 296
Query: 240 GCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFL 299
C ++ +L + +H L+LK G++++ + N LVS+Y G+L A +F + ++
Sbjct: 297 ACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVT 356
Query: 300 WTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIV 359
+ ++I G +Q GY +A+ LFKR+ + P+ TLA+ + AC+ G+L +G+++ Y
Sbjct: 357 YNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTT 416
Query: 360 LNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALN 419
G SN +++ +L+++++KC I A + F +++ +W+ M+ Y + +
Sbjct: 417 KLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFR 476
Query: 420 LFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKS-MQSNFGIEPSIEHYLC--L 476
+F +MQ +E + P+ Y SIL C G ++ G +++NF + Y+C L
Sbjct: 477 IFRQMQ-IEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNA----YVCSVL 531
Query: 477 VDLLGRAGRFDLA 489
+D+ + G+ D A
Sbjct: 532 IDMYAKLGKLDTA 544
>gi|357516765|ref|XP_003628671.1| hypothetical protein MTR_8g063290 [Medicago truncatula]
gi|355522693|gb|AET03147.1| hypothetical protein MTR_8g063290 [Medicago truncatula]
Length = 659
Score = 356 bits (913), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 206/592 (34%), Positives = 325/592 (54%), Gaps = 41/592 (6%)
Query: 32 TFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEM 91
+F L+ KA I K++H+ + + Q+ + L+ Y+ C + +RKV DEM
Sbjct: 20 SFGLLAKALDQNPDIKTLKKLHTMIFYLNSHQNPSLGIKLMRSYAACGEPGLTRKVFDEM 79
Query: 92 PVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCS----FRQ 147
R +VV +N +I ++ D+ +LV +EM G T+ V+ CS R
Sbjct: 80 SDR--NVVFYNVMIRSYVNNHRYDDGLLVFREMVNGGFRPDNYTYPCVLKACSCSENLRY 137
Query: 148 GISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYV 207
G+ +H V K+GL N + + N +++MY K G + EAR +FDE+ +VSW +++ GY
Sbjct: 138 GLLIHGDVLKVGLDFN-LFVGNGLIAMYGKCGCLFEARRVFDEMIWKDVVSWNSMVAGYA 196
Query: 208 NVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDP 267
+ ++A +C +M PD GC +M SL+ + +
Sbjct: 197 HNMRFDDALEICREMEDYGQKPD---------GC----------TMASLMPAVANTSSE- 236
Query: 268 LDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTS 327
N+L ++F + K++ W MI Y + P++AV+L+ ++ K
Sbjct: 237 --NVL-----------YVEKIFVNLERKNLISWNVMIRVYMKNSLPTQAVDLYLQMEKCR 283
Query: 328 VRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAK 387
V P+ T A+ L AC +L +L G+ I EY+ L N ++ SLI M+++CG ++ AK
Sbjct: 284 VEPDAITFASVLPACGDLSALLLGRRIHEYVEKKKLCPNLLLENSLIDMYARCGCLDDAK 343
Query: 388 EVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHS 447
VF+R+ +D+A W+++I+ Y + G G A+ LF +M + G PD++ + +ILSACSHS
Sbjct: 344 RVFDRMKFRDVASWTSLISAYGMTGQGCNAVALFTEMLN-SGQAPDSIAFVAILSACSHS 402
Query: 448 GMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAP 507
G++D+G +FK M ++ I P IEHY CLVDLLGRAGR D A I +MP+E +VWA
Sbjct: 403 GLLDEGRIYFKQMTDDYRITPRIEHYACLVDLLGRAGRVDEAYNIIKQMPIEPNERVWAT 462
Query: 508 LLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRL 567
LLS+C N+++G AA NLL L P +G Y+L++N++ AG WKE R +M +++
Sbjct: 463 LLSSCRVFTNMDIGILAADNLLQLAPEQSGYYVLLSNIYAKAGRWKEVTEIRSVMKRKKI 522
Query: 568 TKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKELHIKLLEAGYIAEAD 619
K PG S VE++ V F+AGD SH S +I + L L K+ E GY+ E D
Sbjct: 523 RKTPGISNVELNNQVHTFLAGDTSHPQSKEIYEELGVLVAKMKELGYVPETD 574
Score = 175 bits (444), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 113/412 (27%), Positives = 194/412 (47%), Gaps = 42/412 (10%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MIR+ NN +++ L + M+ G +++T+P VLKAC+ ++ G +H VLKVG
Sbjct: 90 MIRSYVNNHRYDDGLLVFREMVNGGFRPDNYTYPCVLKACSCSENLRYGLLIHGDVLKVG 149
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+ FV GLI MY KC +R+V DEM + VVSWNS+++ ++ D+A+ +
Sbjct: 150 LDFNLFVGNGLIAMYGKCGCLFEARRVFDEMI--WKDVVSWNSMVAGYAHNMRFDDALEI 207
Query: 121 LKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGK 180
+EM G + T S++ +AN+
Sbjct: 208 CREMEDYGQKPDGCTMASLMPA------------------------VANTSSE------N 237
Query: 181 VNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILG 240
V IF + +++SW +I Y+ +A L QM + V PD + F +++
Sbjct: 238 VLYVEKIFVNLERKNLISWNVMIRVYMKNSLPTQAVDLYLQMEKCRVEPDAITFASVLPA 297
Query: 241 CAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLW 300
C + L L +H + K L+N L+ MY +CG L+ A+RVFD + + V W
Sbjct: 298 CGDLSALLLGRRIHEYVEKKKLCPNLLLENSLIDMYARCGCLDDAKRVFDRMKFRDVASW 357
Query: 301 TSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGK-----EIE 355
TS+I Y G AV LF +L + P+ LSAC+ G L +G+ +
Sbjct: 358 TSLISAYGMTGQGCNAVALFTEMLNSGQAPDSIAFVAILSACSHSGLLDEGRIYFKQMTD 417
Query: 356 EYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVP-DKDLAVWSAMIN 406
+Y + +E L+ + + GR+++A + +++P + + VW+ +++
Sbjct: 418 DYRITPRIEH----YACLVDLLGRAGRVDEAYNIIKQMPIEPNERVWATLLS 465
>gi|225457044|ref|XP_002279639.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21300
[Vitis vinifera]
Length = 807
Score = 356 bits (913), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 203/627 (32%), Positives = 340/627 (54%), Gaps = 14/627 (2%)
Query: 1 MIRNSTNNGSFEETLSTYSSML-QTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKV 59
MI + + +L + SM+ + G++ N + +C+++ S+ G+ +H V+K
Sbjct: 181 MISGFQKSMDYTRSLMFFRSMVWEFGIYPNRVACVSSILSCSSLQSLTHGREIHGVVVKS 240
Query: 60 GFQQDAFVQTGLIDMYSKCSDFVSSRKV----LDEMPVRLRSVVSWNSIISAH-SRACLN 114
G + ++ + LI+MY KC ++ + LD+ VR R+ V WN +IS + S C +
Sbjct: 241 GLDVEEYLVSSLIEMYMKCGSIKNAENIFNSILDKDSVR-RNAVIWNVMISGYVSNGCFS 299
Query: 115 DEAILVLKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANS 170
+A+L+ +M V G++ ST VS+ S CS G +H ++K GL NN I + +
Sbjct: 300 -QALLLFIKMMVWGIKPDYSTMVSLFSLCSESLDIAFGKQIHGLIFKFGLKNN-IRVETA 357
Query: 171 VMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPD 230
++ MY K G + IF +++ W+ +I G +A L + + D
Sbjct: 358 LLDMYLKCGDMGTGLKIFRRSQNHNLIMWSAVISNCAQSGCPTKALELFYEFKMEDGLAD 417
Query: 231 LVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFD 290
+ + ++ C+ + + +H L K G+ ++ + + LV +Y KC D+ +++VF
Sbjct: 418 SGILVAVLRACSSLTLKPEGMQIHGLATKMGFVSDVFVGSALVDLYAKCRDMGYSKKVFL 477
Query: 291 AVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSK 350
+ +K + W ++I GYAQ EA+ F+ + +RPN T+A LS CA L ++
Sbjct: 478 RLSQKDLVSWNALISGYAQDECADEALKAFRDMQLEEIRPNTVTIACILSVCAHLSVMTL 537
Query: 351 GKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAI 410
KE+ Y++ GL S V SLI ++KCG IN + FE++P+++ W+++I G +
Sbjct: 538 CKEVHGYLIRQGLGSTVLVSNSLIATYAKCGDINSSLYTFEKMPERNDVSWNSIILGMGM 597
Query: 411 HGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSI 470
H D+ + LF KM G+KPD V +T+ILSACSH+G VD+G +FKSM +F ++P +
Sbjct: 598 HSRTDEMIVLFDKMV-ASGIKPDHVTFTAILSACSHAGRVDEGCKYFKSMVEDFNLKPQL 656
Query: 471 EHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLT 530
E Y C+VDLLGRAG + A I MP ++W LL +C H + L E A ++
Sbjct: 657 EQYTCMVDLLGRAGHLNQAYDLIMAMPCTPDDRIWGSLLGSCKNHGDEILAEIVANHIFK 716
Query: 531 LNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDR 590
L P S G +L+ANL+ + G +E + R + D L K+PG S +E+D + +F+AGDR
Sbjct: 717 LVPSSVGYRVLLANLYENLGKGREGSKVRSEIKDMGLKKKPGCSWIEVDNNFHIFIAGDR 776
Query: 591 SHHLSVDIRKTLKELHIKLLEAGYIAE 617
SH S +I ++ L ++ AGYI +
Sbjct: 777 SHSQSDEIYAAVESLTTEIKRAGYIPQ 803
Score = 220 bits (561), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 138/457 (30%), Positives = 232/457 (50%), Gaps = 15/457 (3%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFT-FPLVLKACANINSIWDGKRVHSHVLKV 59
+IR T +G F++ + Y ML GV F FP ++KA + ++ G+++H HVLK+
Sbjct: 79 VIREYTEDGFFDDAIGVYLKMLDDGVKVEEFRYFPCLIKAFGGLCDVYKGRQIHGHVLKL 138
Query: 60 GFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAIL 119
G D V L+ MY KC + ++ ++MP +VSWN++IS ++ +++
Sbjct: 139 GVLDDVSVVNSLLTMYWKCGVVEDAVQMFEKMPE--VDLVSWNTMISGFQKSMDYTRSLM 196
Query: 120 VLKEM-WVLGLELSASTFVSVVSGCSFRQ----GISMHCCVYKLGLLNNEIPLANSVMSM 174
+ M W G+ + VS + CS Q G +H V K G L+ E L +S++ M
Sbjct: 197 FFRSMVWEFGIYPNRVACVSSILSCSSLQSLTHGREIHGVVVKSG-LDVEEYLVSSLIEM 255
Query: 175 YAKFGKVNEARSIFDEIGETSIVS-----WTTIIGGYVNVGNVNEAFGLCNQMRRMSVTP 229
Y K G + A +IF+ I + V W +I GYV+ G ++A L +M + P
Sbjct: 256 YMKCGSIKNAENIFNSILDKDSVRRNAVIWNVMISGYVSNGCFSQALLLFIKMMVWGIKP 315
Query: 230 DLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVF 289
D ++L C++ ++ +H L+ K G N ++ L+ MY KCGD+ ++F
Sbjct: 316 DYSTMVSLFSLCSESLDIAFGKQIHGLIFKFGLKNNIRVETALLDMYLKCGDMGTGLKIF 375
Query: 290 DAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLS 349
++ +W+++I AQ G P++A+ LF + L L AC+ L
Sbjct: 376 RRSQNHNLIMWSAVISNCAQSGCPTKALELFYEFKMEDGLADSGILVAVLRACSSLTLKP 435
Query: 350 KGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYA 409
+G +I G S+ V ++L+ +++KC + +K+VF R+ KDL W+A+I+GYA
Sbjct: 436 EGMQIHGLATKMGFVSDVFVGSALVDLYAKCRDMGYSKKVFLRLSQKDLVSWNALISGYA 495
Query: 410 IHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSH 446
D+AL F MQ +E ++P+ V ILS C+H
Sbjct: 496 QDECADEALKAFRDMQ-LEEIRPNTVTIACILSVCAH 531
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 94/325 (28%), Positives = 161/325 (49%), Gaps = 20/325 (6%)
Query: 202 IIGGYVNVGNVNEAFGLCNQMRRMSV-TPDLVVFLNLILGCAQVGNLFLALSMHSLLLKS 260
+I Y G ++A G+ +M V + F LI + +++ +H +LK
Sbjct: 79 VIREYTEDGFFDDAIGVYLKMLDDGVKVEEFRYFPCLIKAFGGLCDVYKGRQIHGHVLKL 138
Query: 261 GYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLF 320
G ++ + N L++MY KCG +E A ++F+ + E + W +MI G+ + + ++ F
Sbjct: 139 GVLDDVSVVNSLLTMYWKCGVVEDAVQMFEKMPEVDLVSWNTMISGFQKSMDYTRSLMFF 198
Query: 321 KRLL-KTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSK 379
+ ++ + + PN +++ +C+ L SL+ G+EI +V +GL+ + +SLI M+ K
Sbjct: 199 RSMVWEFGIYPNRVACVSSILSCSSLQSLTHGREIHGVVVKSGLDVEEYLVSSLIEMYMK 258
Query: 380 CGRINKAKEVFERVPDKD-----LAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDA 434
CG I A+ +F + DKD +W+ MI+GY +G QAL LF KM V G+KPD
Sbjct: 259 CGSIKNAENIFNSILDKDSVRRNAVIWNVMISGYVSNGCFSQALLLFIKMM-VWGIKPDY 317
Query: 435 VVYTSILSACSHS-----GMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLA 489
S+ S CS S G GL F FG++ +I L+D+ + G
Sbjct: 318 STMVSLFSLCSESLDIAFGKQIHGLIF------KFGLKNNIRVETALLDMYLKCGDMGTG 371
Query: 490 LKTIHEMPVEVQAQVWAPLLSACMK 514
LK I +W+ ++S C +
Sbjct: 372 LK-IFRRSQNHNLIMWSAVISNCAQ 395
>gi|297814916|ref|XP_002875341.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297321179|gb|EFH51600.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 659
Score = 356 bits (913), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 196/532 (36%), Positives = 313/532 (58%), Gaps = 15/532 (2%)
Query: 98 VVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCS----FRQGISMHC 153
V SWNS+I+ +R+ + EA+ M L L + S+F + CS G H
Sbjct: 41 VFSWNSVIADLARSGDSAEALRAFSSMRKLSLYPTRSSFPCAIKACSSLLDIFSGKQTHQ 100
Query: 154 CVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVN 213
+ G ++I ++++++ MY+ GK+ +AR +FDEI + +IVSWT++I GY GN
Sbjct: 101 QAFVFGY-QSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNAL 159
Query: 214 EAFGLCNQMRRMSVTPDLVVFLN------LILGCAQVGNLFLALSMHSLLLKSGYNNEDP 267
+A L + D +FL+ +I C++V L S+HS ++K G++
Sbjct: 160 DAVSLFKDLLIEENDDDATMFLDSMGMVSVISACSRVAAKGLTESIHSFVIKRGFDRGVS 219
Query: 268 LDNLLVSMYTKCGD--LELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLK 325
+ N L+ Y K G+ + +AR++FD +++K + S++ YAQ G +EA ++F+RL+K
Sbjct: 220 VGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFDVFRRLIK 279
Query: 326 TSVRP-NEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRIN 384
V N TL+T L A + G+L GK I + ++ GLE + V TS+I M+ KCGR+
Sbjct: 280 EKVVTFNCITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVE 339
Query: 385 KAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSAC 444
A+ F+R+ +K++ W+AMI GY +HG +AL LF M G++P+ + + S+L+AC
Sbjct: 340 TARLAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMID-SGVRPNYITFVSVLAAC 398
Query: 445 SHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQV 504
SH+G+ D G +F +M+ FG+EP +EHY C+VDLLGRAG A I +M +E + +
Sbjct: 399 SHAGLHDVGWHWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQKMKMEPDSII 458
Query: 505 WAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDD 564
W+ LL+AC H NVEL E + L L+P + G Y+L+++++ +G WK+ R M +
Sbjct: 459 WSSLLAACRIHKNVELAEISVARLFELDPSNCGYYMLLSHIYADSGRWKDVERVRMTMKN 518
Query: 565 RRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKELHIKLLEAGYIA 616
R L K PG+S +E++G V VF+ GD H I + L EL+ KLLEAGY++
Sbjct: 519 RGLVKPPGFSLLELNGEVHVFLIGDEEHPQREKIYEFLAELNRKLLEAGYVS 570
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 131/457 (28%), Positives = 229/457 (50%), Gaps = 50/457 (10%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+I + +G E L +SSM + ++ +FP +KAC+++ I+ GK+ H G
Sbjct: 47 VIADLARSGDSAEALRAFSSMRKLSLYPTRSSFPCAIKACSSLLDIFSGKQTHQQAFVFG 106
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+Q D FV + LI MYS C +RKV DE+P R++VSW S+I + +A+ +
Sbjct: 107 YQSDIFVSSALIVMYSTCGKLEDARKVFDEIPK--RNIVSWTSMIRGYDLNGNALDAVSL 164
Query: 121 LKEMWVLGLELSASTF------VSVVSGCS--FRQGI--SMHCCVYKLGLLNNEIPLANS 170
K++ + + A+ F VSV+S CS +G+ S+H V K G + + + N+
Sbjct: 165 FKDLLIEENDDDATMFLDSMGMVSVISACSRVAAKGLTESIHSFVIKRG-FDRGVSVGNT 223
Query: 171 VMSMYAKFGK--VNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQM-RRMSV 227
++ YAK G+ V AR IFD+I + VS+ +I+ Y G NEAF + ++ + V
Sbjct: 224 LLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFDVFRRLIKEKVV 283
Query: 228 TPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARR 287
T + + ++L + G L + +H +++ G ++ + ++ MY KCG +E AR
Sbjct: 284 TFNCITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARL 343
Query: 288 VFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGS 347
FD + K+V WT+MI GY G+ ++A+ LF ++ + VRPN T + L+AC+ G
Sbjct: 344 AFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGL 403
Query: 348 LSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMING 407
G + N ++ V+ L H + M++
Sbjct: 404 HDVG-----WHWFNAMKGRFGVEPGLEH-------------------------YGCMVDL 433
Query: 408 YAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSAC 444
G +A +L KM+ ++PD+++++S+L+AC
Sbjct: 434 LGRAGFLQKAYDLIQKMK----MEPDSIIWSSLLAAC 466
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 99/402 (24%), Positives = 192/402 (47%), Gaps = 34/402 (8%)
Query: 191 IGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLA 250
+ +T + SW ++I G+ EA + MR++S+ P F I C+ + ++F
Sbjct: 36 VDKTDVFSWNSVIADLARSGDSAEALRAFSSMRKLSLYPTRSSFPCAIKACSSLLDIFSG 95
Query: 251 LSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQL 310
H GY ++ + + L+ MY+ CG LE AR+VFD + ++++ WTSMI GY
Sbjct: 96 KQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLN 155
Query: 311 GYPSEAVNLFKRLLKTSVRPNEAT-------LATTLSACAELGSLSKGKEIEEYIVLNGL 363
G +AV+LFK LL ++AT + + +SAC+ + + + I +++ G
Sbjct: 156 GNALDAVSLFKDLL-IEENDDDATMFLDSMGMVSVISACSRVAAKGLTESIHSFVIKRGF 214
Query: 364 ESNRQVQTSLIHMFSKCGR--INKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLF 421
+ V +L+ ++K G + A+++F+++ DKD ++++++ YA GM ++A ++F
Sbjct: 215 DRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFDVF 274
Query: 422 YKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLG 481
++ + + + + +++L A SHSG + G + G+E + ++D+
Sbjct: 275 RRLIKEKVVTFNCITLSTVLLAVSHSGALRIGKCIHDQV-IRMGLEDDVIVGTSIIDMYC 333
Query: 482 RAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNL----LTLNPGSTG 537
+ GR + A M + + W +++ H +AAK L ++ G
Sbjct: 334 KCGRVETARLAFDRMKNK-NVRSWTAMIAGYGMH------GHAAKALELFPAMIDSGVRP 386
Query: 538 NYILMANLFTS---AGM----WKEAATARGLMDDRRLTKEPG 572
NYI ++ + AG+ W +G R EPG
Sbjct: 387 NYITFVSVLAACSHAGLHDVGWHWFNAMKG-----RFGVEPG 423
>gi|357111956|ref|XP_003557776.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Brachypodium distachyon]
Length = 747
Score = 356 bits (913), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 200/602 (33%), Positives = 330/602 (54%), Gaps = 16/602 (2%)
Query: 29 NSFTFPLVLKACANINSIWDGKRVHSHVLKVGF-QQDAFVQTGLIDMYSKCSDFVSSRKV 87
+ FTFP +++A + S ++H+ L++G + F L+ Y + + KV
Sbjct: 69 DGFTFPSLIRAAPSNAS---AAQLHACALRLGLVRPSVFTSGSLVHAYLRFGRISEAYKV 125
Query: 88 LDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCSFRQ 147
DEM R V +WN+++S R EA+ + M G+ T SV+ C
Sbjct: 126 FDEMSER--DVPAWNAMLSGLCRNARAAEAVGLFGRMVGEGVAGDTVTVSSVLPMCVLLG 183
Query: 148 ----GISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTII 203
+ MH K GL + E+ + N+++ +Y K G + EA+ +F + +V+W +II
Sbjct: 184 DQVLALVMHVYAVKHGL-DKELFVCNALIDVYGKLGMLEEAQCVFHGMECRDLVTWNSII 242
Query: 204 GGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYN 263
G G A + MR V+PD++ ++L AQ G+ A S+H +++ G++
Sbjct: 243 SGCEQRGQTAAALKMFQGMRGSGVSPDVLTLVSLASAIAQGGDGRSAKSLHCYVMRRGWD 302
Query: 264 NEDPL-DNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKR 322
+D + N +V MY K ++E A+R+FD++ + W ++I GY Q G +EAV +
Sbjct: 303 VDDIIAGNAIVDMYAKLSNIEAAQRMFDSMPVQDSVSWNTLITGYMQNGLANEAVERYGH 362
Query: 323 LLK-TSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCG 381
+ K ++ + T + L A + LG+L +G + + GL + V T LI +++KCG
Sbjct: 363 MQKHEGLKAIQGTFVSVLPAYSHLGALQQGMRMHALSIKIGLNVDVYVGTCLIDLYAKCG 422
Query: 382 RINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSIL 441
++ +A +FE++P + W+A+I+G +HG G +AL LF +MQ EG+KPD V + S+L
Sbjct: 423 KLAEAMLLFEKMPRRSTGPWNAIISGLGVHGHGAEALTLFSRMQQ-EGIKPDHVTFVSLL 481
Query: 442 SACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQ 501
+ACSH+G+VD G SFF MQ + I P +HY C+ D+LGRAG+ D A I MP++
Sbjct: 482 AACSHAGLVDQGRSFFDVMQVTYDIVPIAKHYACMADMLGRAGQLDEAFNFIQNMPIKPD 541
Query: 502 AQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGL 561
+ VW LL AC H NVE+G+ A++NL L+P + G Y+LM+N++ G W R L
Sbjct: 542 SAVWGALLGACRIHGNVEMGKVASQNLFELDPENVGYYVLMSNMYAKVGKWDGVDEVRSL 601
Query: 562 MDDRRLTKEPGWSQVEIDGSVQVFVAGDRS--HHLSVDIRKTLKELHIKLLEAGYIAEAD 619
+ + L K PGWS +E+ SV VF +G+++ H +I+ L+ L K+ GY+++
Sbjct: 602 VRRQNLQKTPGWSSIEVKRSVNVFYSGNQTEPHPQHEEIQAELRSLLAKIRSVGYVSDYS 661
Query: 620 IV 621
V
Sbjct: 662 FV 663
>gi|359489080|ref|XP_002264194.2| PREDICTED: pentatricopeptide repeat-containing protein
At3g03580-like [Vitis vinifera]
Length = 889
Score = 355 bits (912), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 200/624 (32%), Positives = 336/624 (53%), Gaps = 8/624 (1%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+I NG + E L Y GV +S+T VL+AC + S+ +G +H + K+G
Sbjct: 187 LISGYNANGYWNEALEIYYRFRNLGVVPDSYTMSSVLRACGGLGSVEEGDIIHGLIEKIG 246
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
++D V GL+ MY K + + R++ D+M LR VSWN++I +S+ L +E+I +
Sbjct: 247 IKKDVIVNNGLLSMYCKFNGLIDGRRIFDKMV--LRDAVSWNTMICGYSQVGLYEESIKL 304
Query: 121 LKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGLLNN---EIPLANSVMSMYAK 177
EM V + T S++ C + V+ + + + +N +++MYAK
Sbjct: 305 FMEM-VNQFKPDLLTITSILQACGHLGDLEFGKYVHDYMITSGYECDTTASNILINMYAK 363
Query: 178 FGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNL 237
G + ++ +F + VSW ++I Y+ G+ +EA L +M + V PD V ++ L
Sbjct: 364 CGNLLASQEVFSGMKCKDSVSWNSMINVYIQNGSFDEAMKLF-KMMKTDVKPDSVTYVML 422
Query: 238 ILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSV 297
+ Q+G+L L +H L K G+N+ + N LV MY KCG++ + +VF+ + + +
Sbjct: 423 LSMSTQLGDLHLGKELHCDLAKMGFNSNIVVSNTLVDMYAKCGEMGDSLKVFENMKARDI 482
Query: 298 FLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEY 357
W ++I + + + R+ V P+ AT+ + L C+ L + +GKEI
Sbjct: 483 ITWNTIIASCVHSEDCNLGLRMISRMRTEGVTPDMATMLSILPVCSLLAAKRQGKEIHGC 542
Query: 358 IVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQA 417
I GLES+ V LI M+SKCG + + +VF+ + KD+ W+A+I+ ++G G +A
Sbjct: 543 IFKLGLESDVPVGNVLIEMYSKCGSLRNSFQVFKLMKTKDVVTWTALISACGMYGEGKKA 602
Query: 418 LNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLV 477
+ F +M+ G+ PD V + +I+ ACSHSG+V++GL++F M+ ++ IEP IEHY C+V
Sbjct: 603 VRAFGEME-AAGIVPDHVAFVAIIFACSHSGLVEEGLNYFHRMKKDYKIEPRIEHYACVV 661
Query: 478 DLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTG 537
DLL R+ D A I MP++ + +W LLSAC + E+ E ++ ++ LNP TG
Sbjct: 662 DLLSRSALLDKAEDFILSMPLKPDSSIWGALLSACRMSGDTEIAERVSERIIELNPDDTG 721
Query: 538 NYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVD 597
Y+L++N++ + G W + + R + R L K+PG S +EI V VF G + +
Sbjct: 722 YYVLVSNIYAALGKWDQVRSIRKSIKARGLKKDPGCSWMEIQNKVYVFGTGTKFFEQFEE 781
Query: 598 IRKTLKELHIKLLEAGYIAEADIV 621
+ K L L + + GYIA V
Sbjct: 782 VNKLLGMLAGLMAKEGYIANLQFV 805
Score = 265 bits (677), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 165/516 (31%), Positives = 261/516 (50%), Gaps = 12/516 (2%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+IR T+NG F E LS YS + + +++TFP V+ ACA + K +H VL +G
Sbjct: 86 IIRALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINACAGLLDFEMAKSIHDRVLDMG 145
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F D ++ LIDMY + +D +RKV +EMP LR VVSWNS+IS ++ +EA+ +
Sbjct: 146 FGSDLYIGNALIDMYCRFNDLDKARKVFEEMP--LRDVVSWNSLISGYNANGYWNEALEI 203
Query: 121 LKEMWVLGLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
LG+ + T SV+ C S +G +H + K+G + ++ + N ++SMY
Sbjct: 204 YYRFRNLGVVPDSYTMSSVLRACGGLGSVEEGDIIHGLIEKIG-IKKDVIVNNGLLSMYC 262
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
KF + + R IFD++ VSW T+I GY VG E+ L +M PDL+ +
Sbjct: 263 KFNGLIDGRRIFDKMVLRDAVSWNTMICGYSQVGLYEESIKLFMEMVN-QFKPDLLTITS 321
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
++ C +G+L +H ++ SGY + N+L++MY KCG+L ++ VF + K
Sbjct: 322 ILQACGHLGDLEFGKYVHDYMITSGYECDTTASNILINMYAKCGNLLASQEVFSGMKCKD 381
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEE 356
W SMI Y Q G EA+ LFK ++KT V+P+ T LS +LG L GKE+
Sbjct: 382 SVSWNSMINVYIQNGSFDEAMKLFK-MMKTDVKPDSVTYVMLLSMSTQLGDLHLGKELHC 440
Query: 357 YIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQ 416
+ G SN V +L+ M++KCG + + +VFE + +D+ W+ +I +
Sbjct: 441 DLAKMGFNSNIVVSNTLVDMYAKCGEMGDSLKVFENMKARDIITWNTIIASCVHSEDCNL 500
Query: 417 ALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCL 476
L + +M+ EG+ PD SIL CS G + G+E + L
Sbjct: 501 GLRMISRMR-TEGVTPDMATMLSILPVCSLLAAKRQGKEIHGCI-FKLGLESDVPVGNVL 558
Query: 477 VDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSAC 512
+++ + G + + M + W L+SAC
Sbjct: 559 IEMYSKCGSLRNSFQVFKLMKTK-DVVTWTALISAC 593
Score = 219 bits (558), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 141/493 (28%), Positives = 246/493 (49%), Gaps = 11/493 (2%)
Query: 33 FPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMP 92
F + +A A+ + ++HS ++ +G LI Y+ D SS V +
Sbjct: 16 FSSISRALASAATTTQLHKLHSLIITLGLHHSVIFSAKLIAKYAHFRDPTSSFSVF-RLA 74
Query: 93 VRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCS----FRQG 148
+V WNSII A + L EA+ + E + L+ TF SV++ C+ F
Sbjct: 75 SPSNNVYLWNSIIRALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINACAGLLDFEMA 134
Query: 149 ISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVN 208
S+H V +G +++ + N+++ MY +F +++AR +F+E+ +VSW ++I GY
Sbjct: 135 KSIHDRVLDMG-FGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNA 193
Query: 209 VGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPL 268
G NEA + + R + V PD +++ C +G++ +H L+ K G + +
Sbjct: 194 NGYWNEALEIYYRFRNLGVVPDSYTMSSVLRACGGLGSVEEGDIIHGLIEKIGIKKDVIV 253
Query: 269 DNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSV 328
+N L+SMY K L RR+FD ++ + W +MI GY+Q+G E++ LF ++
Sbjct: 254 NNGLLSMYCKFNGLIDGRRIFDKMVLRDAVSWNTMICGYSQVGLYEESIKLFMEMV-NQF 312
Query: 329 RPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKE 388
+P+ T+ + L AC LG L GK + +Y++ +G E + LI+M++KCG + ++E
Sbjct: 313 KPDLLTITSILQACGHLGDLEFGKYVHDYMITSGYECDTTASNILINMYAKCGNLLASQE 372
Query: 389 VFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSG 448
VF + KD W++MIN Y +G D+A+ LF M+ +KPD+V Y +LS + G
Sbjct: 373 VFSGMKCKDSVSWNSMINVYIQNGSFDEAMKLFKMMK--TDVKPDSVTYVMLLSMSTQLG 430
Query: 449 MVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPL 508
+ G + + G +I LVD+ + G +LK M W +
Sbjct: 431 DLHLGKELHCDL-AKMGFNSNIVVSNTLVDMYAKCGEMGDSLKVFENMKAR-DIITWNTI 488
Query: 509 LSACMKHHNVELG 521
+++C+ + LG
Sbjct: 489 IASCVHSEDCNLG 501
Score = 155 bits (391), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 94/324 (29%), Positives = 172/324 (53%), Gaps = 4/324 (1%)
Query: 131 LSASTFVSVVSGCSFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDE 190
L +S ++ S + Q +H + LGL ++ + + +++ YA F + S+F
Sbjct: 15 LFSSISRALASAATTTQLHKLHSLIITLGL-HHSVIFSAKLIAKYAHFRDPTSSFSVFRL 73
Query: 191 IGETS-IVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFL 249
++ + W +II + G +EA L ++ +R+ + PD F ++I CA + + +
Sbjct: 74 ASPSNNVYLWNSIIRALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINACAGLLDFEM 133
Query: 250 ALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQ 309
A S+H +L G+ ++ + N L+ MY + DL+ AR+VF+ + + V W S+I GY
Sbjct: 134 AKSIHDRVLDMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNA 193
Query: 310 LGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQV 369
GY +EA+ ++ R V P+ T+++ L AC LGS+ +G I I G++ + V
Sbjct: 194 NGYWNEALEIYYRFRNLGVVPDSYTMSSVLRACGGLGSVEEGDIIHGLIEKIGIKKDVIV 253
Query: 370 QTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEG 429
L+ M+ K + + +F+++ +D W+ MI GY+ G+ ++++ LF M+ V
Sbjct: 254 NNGLLSMYCKFNGLIDGRRIFDKMVLRDAVSWNTMICGYSQVGLYEESIKLF--MEMVNQ 311
Query: 430 LKPDAVVYTSILSACSHSGMVDDG 453
KPD + TSIL AC H G ++ G
Sbjct: 312 FKPDLLTITSILQACGHLGDLEFG 335
>gi|413952893|gb|AFW85542.1| hypothetical protein ZEAMMB73_270374 [Zea mays]
Length = 716
Score = 355 bits (912), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 200/552 (36%), Positives = 303/552 (54%), Gaps = 9/552 (1%)
Query: 29 NSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVL 88
+ F L LKAC G+ +H +KVG D FV L+DMY+K D +RKV
Sbjct: 165 DDFVLSLALKACIRSAEYSYGRSLHCDAIKVG-GADGFVMNSLVDMYAKAEDLECARKVF 223
Query: 89 DEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCS---- 144
+ +P R +VVSW S+IS + + +L+ +M + S T +V++ CS
Sbjct: 224 ERIPDR--NVVSWTSMISGCVQNGFASDGLLLFNKMRQDNVPPSEYTIATVITACSALFG 281
Query: 145 FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIG 204
QG MH V K GL++N ++ +++ MY K G+++ AR +FDE+ +V WTT+I
Sbjct: 282 LHQGRWMHGSVIKQGLMSNSF-ISAALLDMYVKCGELDHARCVFDELSYIDLVLWTTMIV 340
Query: 205 GYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNN 264
GY GN +A L R ++ P+ V ++ AQ+ +L L S+H L +K G
Sbjct: 341 GYTQNGNPLDALRLFLDKRFANIAPNSVTTATVLSASAQLRDLSLGKSIHGLAVKLGLVE 400
Query: 265 EDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLL 324
+ + N LV MY KC + A R+F + K V W SMI GYA+ +A+ LFK++
Sbjct: 401 YNVVGNALVDMYAKCQAVSEADRIFGRISNKDVVAWNSMISGYAENNMGDDALMLFKQMS 460
Query: 325 KTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRIN 384
P+ ++ LSA LG L GK I Y V + SN V T+L+++++KCG +
Sbjct: 461 LQGSSPDAISVVNALSASVCLGDLLIGKSIHGYAVKHAFVSNIYVDTALLNLYNKCGDLL 520
Query: 385 KAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSAC 444
A+ VF+ + D++ W AMI GY + G +++LF +M +G+ P+ + +TSILS C
Sbjct: 521 SARRVFDEMNDRNSVTWCAMIGGYGMQGDSAGSIHLFGEMLK-DGVYPNDIAFTSILSTC 579
Query: 445 SHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQV 504
SHSGMV G +F SM +F I PS++HY C+VD+L RAG + AL+ I MP++ V
Sbjct: 580 SHSGMVTAGKRYFDSMAQHFNITPSMKHYACMVDVLARAGNLEDALEFIDNMPMQADTSV 639
Query: 505 WAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDD 564
W L C H ++ E A K ++ L+P Y+L++NL+TS GMW ++ R M +
Sbjct: 640 WGAFLHGCELHSRLQFAEEAIKRMMVLHPERPDLYVLISNLYTSNGMWDKSLAIRRWMQE 699
Query: 565 RRLTKEPGWSQV 576
+ L K PG S V
Sbjct: 700 KGLVKLPGCSSV 711
Score = 199 bits (507), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 126/467 (26%), Positives = 232/467 (49%), Gaps = 11/467 (2%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI NG + L ++ M Q V + +T V+ AC+ + + G+ +H V+K G
Sbjct: 237 MISGCVQNGFASDGLLLFNKMRQDNVPPSEYTIATVITACSALFGLHQGRWMHGSVIKQG 296
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
++F+ L+DMY KC + +R V DE+ +V W ++I +++ +A+ +
Sbjct: 297 LMSNSFISAALLDMYVKCGELDHARCVFDELSY--IDLVLWTTMIVGYTQNGNPLDALRL 354
Query: 121 LKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
+ + ++ T +V+S + G S+H KLGL+ + + N+++ MYA
Sbjct: 355 FLDKRFANIAPNSVTTATVLSASAQLRDLSLGKSIHGLAVKLGLVEYNV-VGNALVDMYA 413
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K V+EA IF I +V+W ++I GY ++A L QM +PD + +N
Sbjct: 414 KCQAVSEADRIFGRISNKDVVAWNSMISGYAENNMGDDALMLFKQMSLQGSSPDAISVVN 473
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
+ +G+L + S+H +K + + +D L+++Y KCGDL ARRVFD + +++
Sbjct: 474 ALSASVCLGDLLIGKSIHGYAVKHAFVSNIYVDTALLNLYNKCGDLLSARRVFDEMNDRN 533
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEE 356
W +MIGGY G + +++LF +LK V PN+ + LS C+ G ++ GK +
Sbjct: 534 SVTWCAMIGGYGMQGDSAGSIHLFGEMLKDGVYPNDIAFTSILSTCSHSGMVTAGKRYFD 593
Query: 357 YIVLN-GLESNRQVQTSLIHMFSKCGRINKAKEVFERVP-DKDLAVWSAMINGYAIHGMG 414
+ + + + + ++ + ++ G + A E + +P D +VW A ++G +H
Sbjct: 594 SMAQHFNITPSMKHYACMVDVLARAGNLEDALEFIDNMPMQADTSVWGAFLHGCELHSRL 653
Query: 415 DQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQ 461
A +M + +PD +Y I + + +GM D L+ + MQ
Sbjct: 654 QFAEEAIKRMMVLHPERPD--LYVLISNLYTSNGMWDKSLAIRRWMQ 698
Score = 198 bits (503), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 128/388 (32%), Positives = 202/388 (52%), Gaps = 22/388 (5%)
Query: 68 QTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEM--- 124
+T L+ Y+ D S+R V D P S+ +++ + + +A+ + +M
Sbjct: 100 RTKLLSCYAALGDLASARMVFDGTP--RPDAYSYGAMLWCLVQTERHADAVALHHDMRRR 157
Query: 125 ---------WVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGLLNNEIPLANSVMSMY 175
+VL L L A + + G S+HC K+G + + NS++ MY
Sbjct: 158 RPCPEAQDDFVLSLALKA-----CIRSAEYSYGRSLHCDAIKVGGADGFV--MNSLVDMY 210
Query: 176 AKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFL 235
AK + AR +F+ I + ++VSWT++I G V G ++ L N+MR+ +V P
Sbjct: 211 AKAEDLECARKVFERIPDRNVVSWTSMISGCVQNGFASDGLLLFNKMRQDNVPPSEYTIA 270
Query: 236 NLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEK 295
+I C+ + L MH ++K G + + L+ MY KCG+L+ AR VFD +
Sbjct: 271 TVITACSALFGLHQGRWMHGSVIKQGLMSNSFISAALLDMYVKCGELDHARCVFDELSYI 330
Query: 296 SVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIE 355
+ LWT+MI GY Q G P +A+ LF ++ PN T AT LSA A+L LS GK I
Sbjct: 331 DLVLWTTMIVGYTQNGNPLDALRLFLDKRFANIAPNSVTTATVLSASAQLRDLSLGKSIH 390
Query: 356 EYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGD 415
V GL V +L+ M++KC +++A +F R+ +KD+ W++MI+GYA + MGD
Sbjct: 391 GLAVKLGLVEYNVVGNALVDMYAKCQAVSEADRIFGRISNKDVVAWNSMISGYAENNMGD 450
Query: 416 QALNLFYKMQHVEGLKPDAVVYTSILSA 443
AL LF +M ++G PDA+ + LSA
Sbjct: 451 DALMLFKQMS-LQGSSPDAISVVNALSA 477
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 93/289 (32%), Positives = 150/289 (51%), Gaps = 7/289 (2%)
Query: 159 GLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGL 218
GLL + ++S YA G + AR +FD S+ ++ V +A L
Sbjct: 91 GLLLGSLRARTKLLSCYAALGDLASARMVFDGTPRPDAYSYGAMLWCLVQTERHADAVAL 150
Query: 219 CNQMRRMSVTP----DLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVS 274
+ MRR P D V+ L L C + S+H +K G + + N LV
Sbjct: 151 HHDMRRRRPCPEAQDDFVLSLALK-ACIRSAEYSYGRSLHCDAIKVG-GADGFVMNSLVD 208
Query: 275 MYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEAT 334
MY K DLE AR+VF+ + +++V WTSMI G Q G+ S+ + LF ++ + +V P+E T
Sbjct: 209 MYAKAEDLECARKVFERIPDRNVVSWTSMISGCVQNGFASDGLLLFNKMRQDNVPPSEYT 268
Query: 335 LATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVP 394
+AT ++AC+ L L +G+ + ++ GL SN + +L+ M+ KCG ++ A+ VF+ +
Sbjct: 269 IATVITACSALFGLHQGRWMHGSVIKQGLMSNSFISAALLDMYVKCGELDHARCVFDELS 328
Query: 395 DKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSA 443
DL +W+ MI GY +G AL LF + + P++V ++LSA
Sbjct: 329 YIDLVLWTTMIVGYTQNGNPLDALRLFLD-KRFANIAPNSVTTATVLSA 376
>gi|357440579|ref|XP_003590567.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355479615|gb|AES60818.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1212
Score = 355 bits (912), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 208/629 (33%), Positives = 340/629 (54%), Gaps = 16/629 (2%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+I G E LS + M + GV N++TF L+AC I G+ +H+ +LK
Sbjct: 222 IISAHVGEGESLEALSLFRRMQEVGVESNTYTFVSALQACEGPTFIKIGRGIHAVILKSN 281
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
D +V LI MY+ C + +V M + VSWN+++S + + +AI
Sbjct: 282 HFTDVYVSNALIAMYANCGQMEDAERVFKSM--LFKDCVSWNTLLSGMVQNDMYSDAINH 339
Query: 121 LKEMWVLGLELSASTFVSVVSG----CSFRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
++M G + + +++++ + G+ +H K G+ +N + + NS++ MY
Sbjct: 340 FQDMQDSGQKPDQVSVLNMIAASGRSANLLAGMEVHAYAIKHGIDSN-MHIGNSLIDMYG 398
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCN--QMRRMSVTPDLVVF 234
K V S F+ + E ++SWTTII GY +A L Q+ +M V P ++
Sbjct: 399 KCCCVKYMGSAFEYMPEKDLISWTTIIAGYAQNECHLDALNLLRKVQLEKMDVDPMMIG- 457
Query: 235 LNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLE 294
+++L C+ + + L +H +LK G + + N +V++Y + ++ AR VF+++
Sbjct: 458 -SILLACSGLKSEKLIKEIHGYVLKGGLA-DILIQNAIVNVYGELALVDYARHVFESINS 515
Query: 295 KSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEI 354
K + WTSMI G EA+ LF L++T++ P+ TL + L A A L SL KGKEI
Sbjct: 516 KDIVSWTSMITCCVHNGLAIEALELFNSLIETNIEPDLITLVSVLYAAAALSSLKKGKEI 575
Query: 355 EEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMG 414
+++ G + SL+ M+++CG + A+ +F V +DL +W++MIN +HG G
Sbjct: 576 HGFLIRKGFFLEGLIANSLVDMYARCGTMENARNIFNYVKQRDLILWTSMINANGMHGCG 635
Query: 415 DQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYL 474
A++LF KM E + PD + + ++L ACSHSG+V +G F+ M++ + +EP EHY
Sbjct: 636 KDAIDLFSKMTD-ENVLPDHITFLALLYACSHSGLVVEGKQHFEIMKNEYKLEPWPEHYA 694
Query: 475 CLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPG 534
CLVDLL R+ + A + MP+E A+VW LL AC H N +LGE AAK LL LN
Sbjct: 695 CLVDLLARSNSLEEAYHFVRNMPIEPSAEVWCALLGACRIHSNNDLGEVAAKKLLQLNTE 754
Query: 535 STGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHL 594
++GNY+L++N F + G W + R +M +L K+PG S +E++ + F+A D+SH
Sbjct: 755 NSGNYVLVSNTFAADGRWNDVEEVRSIMKGNKLKKKPGCSWIEVENKIHTFMARDKSHPQ 814
Query: 595 SVDIRKTLKELHIKLL--EAGYIAEADIV 621
+I L + KLL + GY A+ +V
Sbjct: 815 CNNIYLKLAQF-TKLLKEKGGYRAQTKLV 842
Score = 222 bits (565), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 136/426 (31%), Positives = 228/426 (53%), Gaps = 17/426 (3%)
Query: 33 FPL------VLKACANINSIWDGKRVHSHVLKV-GFQQDAFVQTGLIDMYSKCSDFVSSR 85
FPL L+ CA+ ++ G+++H+H LK + F+ T + MY KC F +
Sbjct: 43 FPLQQAYSQALELCASHKALPQGQQLHAHFLKTQNYLDSVFLDTKFVHMYGKCGSFYDAV 102
Query: 86 KVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGC-S 144
KV D+M R ++ +WN++I A A EAI + KEM VLG+ L A TF V+ C +
Sbjct: 103 KVFDKMSER--TIFTWNAMIGACVSAGRYVEAIELYKEMRVLGVSLDAFTFPCVLKACGA 160
Query: 145 FRQ---GISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDE--IGETSIVSW 199
F++ G +H K G + + N++++MYAK G + AR +FD + + VSW
Sbjct: 161 FKERRLGCEIHGVAVKCGY-GGFVFVCNALIAMYAKCGDLGGARVLFDSGLMEKDDPVSW 219
Query: 200 TTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLK 259
+II +V G EA L +M+ + V + F++ + C + + +H+++LK
Sbjct: 220 NSIISAHVGEGESLEALSLFRRMQEVGVESNTYTFVSALQACEGPTFIKIGRGIHAVILK 279
Query: 260 SGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNL 319
S + + + N L++MY CG +E A RVF ++L K W +++ G Q S+A+N
Sbjct: 280 SNHFTDVYVSNALIAMYANCGQMEDAERVFKSMLFKDCVSWNTLLSGMVQNDMYSDAINH 339
Query: 320 FKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSK 379
F+ + + +P++ ++ ++A +L G E+ Y + +G++SN + SLI M+ K
Sbjct: 340 FQDMQDSGQKPDQVSVLNMIAASGRSANLLAGMEVHAYAIKHGIDSNMHIGNSLIDMYGK 399
Query: 380 CGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTS 439
C + FE +P+KDL W+ +I GYA + ALNL K+Q +E + D ++ S
Sbjct: 400 CCCVKYMGSAFEYMPEKDLISWTTIIAGYAQNECHLDALNLLRKVQ-LEKMDVDPMMIGS 458
Query: 440 ILSACS 445
IL ACS
Sbjct: 459 ILLACS 464
Score = 213 bits (541), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 144/516 (27%), Positives = 253/516 (49%), Gaps = 11/516 (2%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI + G + E + Y M GV ++FTFP VLKAC G +H +K G
Sbjct: 119 MIGACVSAGRYVEAIELYKEMRVLGVSLDAFTFPCVLKACGAFKERRLGCEIHGVAVKCG 178
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+ FV LI MY+KC D +R + D + VSWNSIISAH + EA+ +
Sbjct: 179 YGGFVFVCNALIAMYAKCGDLGGARVLFDSGLMEKDDPVSWNSIISAHVGEGESLEALSL 238
Query: 121 LKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
+ M +G+E + TFVS + C + G +H + K ++ ++N++++MYA
Sbjct: 239 FRRMQEVGVESNTYTFVSALQACEGPTFIKIGRGIHAVILKSNHF-TDVYVSNALIAMYA 297
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
G++ +A +F + VSW T++ G V ++A M+ PD V LN
Sbjct: 298 NCGQMEDAERVFKSMLFKDCVSWNTLLSGMVQNDMYSDAINHFQDMQDSGQKPDQVSVLN 357
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
+I + NL + +H+ +K G ++ + N L+ MY KC ++ F+ + EK
Sbjct: 358 MIAASGRSANLLAGMEVHAYAIKHGIDSNMHIGNSLIDMYGKCCCVKYMGSAFEYMPEKD 417
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEE 356
+ WT++I GYAQ +A+NL +++ + + + + L AC+ L S KEI
Sbjct: 418 LISWTTIIAGYAQNECHLDALNLLRKVQLEKMDVDPMMIGSILLACSGLKSEKLIKEIHG 477
Query: 357 YIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQ 416
Y++ GL ++ +Q ++++++ + ++ A+ VFE + KD+ W++MI +G+ +
Sbjct: 478 YVLKGGL-ADILIQNAIVNVYGELALVDYARHVFESINSKDIVSWTSMITCCVHNGLAIE 536
Query: 417 ALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSM-QSNFGIEPSIEHYLC 475
AL LF + ++PD + S+L A + + G + + F +E I +
Sbjct: 537 ALELFNSLIET-NIEPDLITLVSVLYAAAALSSLKKGKEIHGFLIRKGFFLEGLIAN--S 593
Query: 476 LVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSA 511
LVD+ R G + A + I + +W +++A
Sbjct: 594 LVDMYARCGTMENA-RNIFNYVKQRDLILWTSMINA 628
>gi|224122892|ref|XP_002318942.1| predicted protein [Populus trichocarpa]
gi|222857318|gb|EEE94865.1| predicted protein [Populus trichocarpa]
Length = 707
Score = 355 bits (912), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 203/621 (32%), Positives = 337/621 (54%), Gaps = 11/621 (1%)
Query: 1 MIRNSTNNGSFEE--TLSTYSSMLQTGVHGNSFTFPLVLKACA-NINSIWDGKRVHSHVL 57
+I ++NGS L + M+ + ++ TFP V A A N+ +D ++VH +
Sbjct: 80 LIHGLSHNGSKGSNFVLELFRRMIANNILPDAHTFPGVFTAAALNLGCNFDARQVHVLGI 139
Query: 58 KVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEA 117
K D FV + L++ Y K +RK+ D MP R ++VSW ++IS ++ + EA
Sbjct: 140 KTASIDDVFVGSSLVNFYCKVGCVFEARKLFDRMPER--NLVSWTTMISGYASKQMAKEA 197
Query: 118 ILVLKEMWVLGLELSASTFVSVVSG--CS--FRQGISMHCCVYKLGLLNNEIPLANSVMS 173
+ V M ++ L+ F SV+S C G +HC V K G+L + + N++++
Sbjct: 198 LGVFGLMRLVEGNLNEFVFTSVLSALVCPEFVDSGKQVHCVVVKNGVLEF-VSVLNALVT 256
Query: 174 MYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVV 233
MYAK G +N + +F+ + + ++W+ +I GY G+ ++A L ++M P
Sbjct: 257 MYAKCGNLNYSLMLFEMCSDKNAITWSALITGYSQAGDSHKALKLFSKMHYAGFVPSEFT 316
Query: 234 FLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVL 293
+ ++ C+ V + H LLKSGY + LV MY K G AR+ FD +L
Sbjct: 317 LVGVLKACSDVAAIEEGKQTHGYLLKSGYETQIYTATALVDMYAKFGFTGDARKGFDFLL 376
Query: 294 EKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKE 353
E + LWTS+I GY Q G EA++++ R+ + PNE T+A+ L AC+ L +L +GK+
Sbjct: 377 EPDLVLWTSIIAGYVQNGKNEEALSMYGRMQMRKILPNELTMASVLKACSNLAALEQGKQ 436
Query: 354 IEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGM 413
I + GL ++++L M++KCG + + +F R+ +D+ W+AMI+G + +G
Sbjct: 437 IHARTIKYGLGPELSIRSALSTMYAKCGSLEEGVLIFRRMLQRDIVSWNAMISGLSQNGH 496
Query: 414 GDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHY 473
G +AL LF +M+ +EG KPD + + ++LSACSH G+V G ++F M F + P +EHY
Sbjct: 497 GREALELFEEMR-LEGTKPDHITFVTVLSACSHMGIVKRGWAYFNMMFDEFCLVPRVEHY 555
Query: 474 LCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNP 533
C+VD+L RAG+ + A + I ++ +W LL AC H N ELG YA + L+ L
Sbjct: 556 ACMVDVLSRAGKLNEAKEFIESAIIDHGMCLWRILLPACRNHCNYELGAYAGEKLMELGS 615
Query: 534 GSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHH 593
+ Y+L+++++T+ G + R +M R + KE G S +E+ V VFV GD+ H
Sbjct: 616 RESSAYVLLSSIYTAMGRLADVVRVRRMMKVRGVRKETGCSWIELKSHVHVFVVGDQIHP 675
Query: 594 LSVDIRKTLKELHIKLLEAGY 614
+I+ + L + + GY
Sbjct: 676 QIEEIQGAIWRLRKHMKDDGY 696
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 105/347 (30%), Positives = 175/347 (50%), Gaps = 11/347 (3%)
Query: 144 SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTII 203
S ++G +H + K+ L++ LAN+++ YAK G ++ A+ +F+ + ++VS+ +I
Sbjct: 22 SLKKGQILHAHIIKIPYLSSCNYLANNLIKFYAKCGHLHGAKLVFENLKHKNVVSYNCLI 81
Query: 204 GGYVNVGNVNEAFGLCNQMRRM---SVTPDLVVFLNLILGCA-QVGNLFLALSMHSLLLK 259
G + G+ F L RRM ++ PD F + A +G F A +H L +K
Sbjct: 82 HGLSHNGSKGSNFVL-ELFRRMIANNILPDAHTFPGVFTAAALNLGCNFDARQVHVLGIK 140
Query: 260 SGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNL 319
+ ++ + + LV+ Y K G + AR++FD + E+++ WT+MI GYA EA+ +
Sbjct: 141 TASIDDVFVGSSLVNFYCKVGCVFEARKLFDRMPERNLVSWTTMISGYASKQMAKEALGV 200
Query: 320 FKRLLKTSVRPNEATLATTLSA--CAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMF 377
F + NE + LSA C E + GK++ +V NG+ V +L+ M+
Sbjct: 201 FGLMRLVEGNLNEFVFTSVLSALVCPEF--VDSGKQVHCVVVKNGVLEFVSVLNALVTMY 258
Query: 378 SKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVY 437
+KCG +N + +FE DK+ WSA+I GY+ G +AL LF KM H G P
Sbjct: 259 AKCGNLNYSLMLFEMCSDKNAITWSALITGYSQAGDSHKALKLFSKM-HYAGFVPSEFTL 317
Query: 438 TSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAG 484
+L ACS +++G + + G E I LVD+ + G
Sbjct: 318 VGVLKACSDVAAIEEGKQTHGYLLKS-GYETQIYTATALVDMYAKFG 363
>gi|449455116|ref|XP_004145299.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 722
Score = 355 bits (912), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 197/617 (31%), Positives = 341/617 (55%), Gaps = 10/617 (1%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
++RN T G E TL Y M+ +H + T+P VL++C++ +++ G+ +H +++K+G
Sbjct: 96 ILRNLTRYGESERTLLVYQQMVAKSMHPDEETYPFVLRSCSSFSNVGFGRTIHGYLVKLG 155
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAIL- 119
F V T L +MY +C +F ++ ++ D+ V+ + W S ++ N E I
Sbjct: 156 FDLFDVVATALAEMYEECIEFENAHQLFDKRSVK---DLGWPSSLTTEGPQNDNGEGIFR 212
Query: 120 VLKEMWVLGLELSASTFVSV---VSGCSFRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
V M L + TF ++ ++G + Q + C+ + L+ ++ + +V+S+Y+
Sbjct: 213 VFGRMIAEQLVPDSFTFFNLLRFIAGLNSIQLAKIVHCIAIVSKLSGDLLVNTAVLSLYS 272
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K + +AR +FD++ E V W +I Y G E L M R + DL L
Sbjct: 273 KLRSLVDARKLFDKMPEKDRVVWNIMIAAYAREGKPTECLELFKSMARSGIRSDLFTALP 332
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
+I AQ+ + H+ +L++G +++ + N L+ MY +C L+ A ++F+ + +KS
Sbjct: 333 VISSIAQLKCVDWGKQTHAHILRNGSDSQVSVHNSLIDMYCECKILDSACKIFNWMTDKS 392
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEE 356
V W++MI GY + G A++LF ++ ++ + + L A +G+L K +
Sbjct: 393 VISWSAMIKGYVKNGQSLTALSLFSKMKSDGIQADFVIMINILPAFVHIGALENVKYLHG 452
Query: 357 YIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFE--RVPDKDLAVWSAMINGYAIHGMG 414
Y + GL S + T+L+ ++KCG I A+ +FE ++ DKDL +W++MI+ +A HG
Sbjct: 453 YSMKLGLTSLPSLNTALLITYAKCGSIEMAQRLFEEEKIDDKDLIMWNSMISAHANHGDW 512
Query: 415 DQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYL 474
Q L+ +M+ KPD V + +L+AC +SG+V+ G FFK M ++G +PS EHY
Sbjct: 513 SQCFKLYNRMK-CSNSKPDQVTFLGLLTACVNSGLVEKGKEFFKEMTESYGCQPSQEHYA 571
Query: 475 CLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPG 534
C+V+LLGRAG A + + MP++ A+VW PLLSAC H +L E+AA+ L+ + P
Sbjct: 572 CMVNLLGRAGLISEAGELVKNMPIKPDARVWGPLLSACKMHPGSKLAEFAAEKLINMEPR 631
Query: 535 STGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHL 594
+ GNYIL++N++ +AG W A R + ++ L K PG S +EI+G V F D++H
Sbjct: 632 NAGNYILLSNIYAAAGKWDGVAKMRSFLRNKGLKKIPGCSWLEINGHVTEFRVADQTHPR 691
Query: 595 SVDIRKTLKELHIKLLE 611
+ DI L L +++ E
Sbjct: 692 AGDIYTILGNLELEIKE 708
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 127/491 (25%), Positives = 240/491 (48%), Gaps = 17/491 (3%)
Query: 32 TFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEM 91
T L+ C NSI +++H+ + GF Q+ + + LID Y+ S +V
Sbjct: 29 TLSLLFSRC---NSIQHLQQIHARFILHGFHQNPTLSSKLIDCYANLGLLNHSLQVF--C 83
Query: 92 PVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGC-SFRQ--- 147
V ++ +N+I+ +R ++ +LV ++M + T+ V+ C SF
Sbjct: 84 SVIDPNLTLFNAILRNLTRYGESERTLLVYQQMVAKSMHPDEETYPFVLRSCSSFSNVGF 143
Query: 148 GISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYV 207
G ++H + KLG ++ +A ++ MY + + A +FD+ + +++
Sbjct: 144 GRTIHGYLVKLGFDLFDV-VATALAEMYEECIEFENAHQLFDKRSVKDLGWPSSLTTEGP 202
Query: 208 NVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDP 267
N F + +M + PD F NL+ A + ++ LA +H + + S + +
Sbjct: 203 QNDNGEGIFRVFGRMIAEQLVPDSFTFFNLLRFIAGLNSIQLAKIVHCIAIVSKLSGDLL 262
Query: 268 LDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTS 327
++ ++S+Y+K L AR++FD + EK +W MI YA+ G P+E + LFK + ++
Sbjct: 263 VNTAVLSLYSKLRSLVDARKLFDKMPEKDRVVWNIMIAAYAREGKPTECLELFKSMARSG 322
Query: 328 VRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAK 387
+R + T +S+ A+L + GK+ +I+ NG +S V SLI M+ +C ++ A
Sbjct: 323 IRSDLFTALPVISSIAQLKCVDWGKQTHAHILRNGSDSQVSVHNSLIDMYCECKILDSAC 382
Query: 388 EVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHS 447
++F + DK + WSAMI GY +G AL+LF KM+ +G++ D V+ +IL A H
Sbjct: 383 KIFNWMTDKSVISWSAMIKGYVKNGQSLTALSLFSKMKS-DGIQADFVIMINILPAFVHI 441
Query: 448 GMVDDGLSFFKSMQSNFGIE--PSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQV- 504
G +++ + + G+ PS+ L + + G ++A + E ++ + +
Sbjct: 442 GALEN-VKYLHGYSMKLGLTSLPSLNTALLIT--YAKCGSIEMAQRLFEEEKIDDKDLIM 498
Query: 505 WAPLLSACMKH 515
W ++SA H
Sbjct: 499 WNSMISAHANH 509
>gi|302814190|ref|XP_002988779.1| hypothetical protein SELMODRAFT_128847 [Selaginella moellendorffii]
gi|300143350|gb|EFJ10041.1| hypothetical protein SELMODRAFT_128847 [Selaginella moellendorffii]
Length = 796
Score = 355 bits (912), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 200/627 (31%), Positives = 343/627 (54%), Gaps = 15/627 (2%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKV- 59
M+ NG + L Y M + N + VL ACA+I ++ +GK +HS +
Sbjct: 95 MLTAYAQNGHYRAALDLYKRM---DLQPNPVVYTTVLGACASIEALEEGKAIHSRISGTK 151
Query: 60 GFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAIL 119
G + D ++ L+ MY+KC ++++ + M R RSV SWN++I+A++++ +EAI
Sbjct: 152 GLKLDVILENSLLTMYAKCGSLEDAKRLFERMSGR-RSVSSWNAMIAAYAQSGHFEEAIR 210
Query: 120 VLKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMY 175
+ ++M V E S TF SV+S CS QG +H + G ++ L N++++MY
Sbjct: 211 LYEDMDV---EPSVRTFTSVLSACSNLGLLDQGRKIHALISSRGT-ELDLSLQNALLTMY 266
Query: 176 AKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFL 235
A+ +++A IF + +VSW+ +I + +EA ++M+ V P+ F
Sbjct: 267 ARCKCLDDAAKIFQRLPRRDVVSWSAMIAAFAETDLFDEAIEFYSKMQLEGVRPNYYTFA 326
Query: 236 NLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEK 295
+++L CA VG+L ++H +L +GY LV +YT G L+ AR +FD + +
Sbjct: 327 SVLLACASVGDLRAGRAVHDQILGNGYKITLVNGTALVDLYTSYGSLDEARSLFDQIENR 386
Query: 296 SVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRP-NEATLATTLSACAELGSLSKGKEI 354
LWT +IGGY++ G+ + + L++ + T+ P + + +SACA LG+ + ++
Sbjct: 387 DEGLWTVLIGGYSKQGHRTGVLELYREMKNTTKVPATKIIYSCVISACASLGAFADARQA 446
Query: 355 EEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMG 414
I +G+ S+ + TSL++M+S+ G + A++VF+++ +D W+ +I GYA HG
Sbjct: 447 HSDIEADGMISDFVLATSLVNMYSRWGNLESARQVFDKMSSRDTLAWTTLIAGYAKHGEH 506
Query: 415 DQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYL 474
AL L+ +M+ +EG +P + + +L ACSH+G+ + G F S+QS++ + P+I HY
Sbjct: 507 GLALGLYKEME-LEGAEPSELTFMVVLYACSHAGLQEQGKQLFISIQSDYAMHPNIAHYS 565
Query: 475 CLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPG 534
C++DLL RAGR A + I+ MPVE W+ LL A H +V+ +AA + L+P
Sbjct: 566 CIIDLLSRAGRLSDAEELINAMPVEPNDVTWSSLLGASRIHKDVKRATHAAGQITKLDPV 625
Query: 535 STGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHL 594
+Y+L++N+ G A+ R M R + K G S +E+ + F GD SH
Sbjct: 626 DPASYVLLSNVHAVTGNLAGMASVRNTMVARGVKKRRGSSWIEVADQIHEFNVGDNSHPR 685
Query: 595 SVDIRKTLKELHIKLLEAGYIAEADIV 621
+I L+ L K+ EAGY+ E++ V
Sbjct: 686 FQEIFAELQRLSPKIKEAGYVPESEEV 712
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 126/432 (29%), Positives = 214/432 (49%), Gaps = 27/432 (6%)
Query: 159 GLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGL 218
G + + L N ++ Y K G V AR FD I + SW +++ Y G+ A L
Sbjct: 52 GAASANVFLGNEIVRAYGKCGSVASARVAFDAIARKNDYSWGSMLTAYAQNGHYRAALDL 111
Query: 219 CNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKS-GYNNEDPLDNLLVSMYT 277
+RM + P+ VV+ ++ CA + L ++HS + + G + L+N L++MY
Sbjct: 112 ---YKRMDLQPNPVVYTTVLGACASIEALEEGKAIHSRISGTKGLKLDVILENSLLTMYA 168
Query: 278 KCGDLELARRVFDAVL-EKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLA 336
KCG LE A+R+F+ + +SV W +MI YAQ G+ EA+ L++ + V P+ T
Sbjct: 169 KCGSLEDAKRLFERMSGRRSVSSWNAMIAAYAQSGHFEEAIRLYEDM---DVEPSVRTFT 225
Query: 337 TTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDK 396
+ LSAC+ LG L +G++I I G E + +Q +L+ M+++C ++ A ++F+R+P +
Sbjct: 226 SVLSACSNLGLLDQGRKIHALISSRGTELDLSLQNALLTMYARCKCLDDAAKIFQRLPRR 285
Query: 397 DLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSF 456
D+ WSAMI +A + D+A+ + KMQ +EG++P+ + S+L AC+ G + G +
Sbjct: 286 DVVSWSAMIAAFAETDLFDEAIEFYSKMQ-LEGVRPNYYTFASVLLACASVGDLRAGRAV 344
Query: 457 FKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMK-- 514
+ N G + ++ + LVDL G D A +++ + +W L+ K
Sbjct: 345 HDQILGN-GYKITLVNGTALVDLYTSYGSLDEA-RSLFDQIENRDEGLWTVLIGGYSKQG 402
Query: 515 HHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWS 574
H L Y T P + Y + + S G + +A A S
Sbjct: 403 HRTGVLELYREMKNTTKVPATKIIYSCVISACASLGAFADARQAH--------------S 448
Query: 575 QVEIDGSVQVFV 586
+E DG + FV
Sbjct: 449 DIEADGMISDFV 460
>gi|449461477|ref|XP_004148468.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g39530-like [Cucumis sativus]
gi|449515698|ref|XP_004164885.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g39530-like [Cucumis sativus]
Length = 837
Score = 355 bits (912), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 199/625 (31%), Positives = 353/625 (56%), Gaps = 9/625 (1%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+I T +G E +L ++ M+++ V + + +L AC+ + + GK++H++VL+
Sbjct: 214 IITGYTKSGRSEVSLQLFNLMMESNVIPDKYVLSSILNACSVLGYLKGGKQIHAYVLRSE 273
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+ D LID Y+KC + + + D + V+ +++SW ++I+ + + + EA+ +
Sbjct: 274 TKMDVSTYNVLIDFYTKCGRVKAGKALFDRLDVK--NIISWTTMIAGYMQNSYDWEAVEL 331
Query: 121 LKEMWVLGLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
+ EM+ +G + SV++ C + + G +H V K+ L ++ + N+++ MY+
Sbjct: 332 VGEMFRMGWKPDEYACSSVLTSCGSVDALQHGRQIHSYVIKVCLEHDNF-VTNALIDMYS 390
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K +++A+ +FD + S+V + +I GY G + A + +MR V+P + F++
Sbjct: 391 KCNALDDAKRVFDVVTCHSVVYYNAMIEGYSRQGYLCGALEVFQEMRLKHVSPSFLTFVS 450
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
L+ A + L L+ +H L++K G++ + + L+ +Y+KC + AR VF+ K
Sbjct: 451 LLGLSAALLCLQLSKQIHGLIIKYGFSLDKFTSSALIDVYSKCSCIRDARYVFEGTTNKD 510
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEE 356
+ +W S+ GY EA L+ L + RPNE T A +A + L SL G++
Sbjct: 511 IVVWNSLFSGYNLQLKSEEAFKLYSDLQLSRERPNEFTFAALTTAASILASLPHGQQFHN 570
Query: 357 YIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQ 416
++ GLES+ + +L+ M++KCG + +A+++F KD A W++MI+ YA HG ++
Sbjct: 571 QVMKMGLESDPFITNALVDMYAKCGSVEEAEKIFSSSVWKDTACWNSMISMYAQHGKVEE 630
Query: 417 ALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCL 476
AL +F M + P+ V + S+LSACSH G V+DGL + SM + +GIEP IEHY +
Sbjct: 631 ALRMFETMVS-NNINPNYVTFVSVLSACSHVGFVEDGLQHYNSM-ARYGIEPGIEHYASV 688
Query: 477 VDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGST 536
V LLGRAGR A + I +M + A VW LLSAC NVEL ++AA+ ++++P +
Sbjct: 689 VTLLGRAGRLTEAREFIEKMTIRPAALVWRSLLSACRVFGNVELAKHAAEMAISIDPMDS 748
Query: 537 GNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSV 596
G+Y++++N+F S GMW + R MD + KEPG S +E++G V +FV+ D+ H +
Sbjct: 749 GSYVMLSNIFASKGMWGDVKRLRLKMDVNGVVKEPGQSWIEVNGEVHIFVSRDKVHDETD 808
Query: 597 DIRKTLKELHIKLLEAGYIAEADIV 621
I L EL ++ + G + + I+
Sbjct: 809 LIYLALDELTTQMKDVGCVHDTTIL 833
Score = 201 bits (510), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 135/496 (27%), Positives = 248/496 (50%), Gaps = 12/496 (2%)
Query: 29 NSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVL 88
N + +++AC + G +VHS+V+K GF +D +V T L+ +Y+K + +R V
Sbjct: 141 NEYILASIIRACVQRDGGEPGSQVHSYVIKSGFGEDVYVGTSLVVLYAKHGEIDKARLVF 200
Query: 89 DEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCS---- 144
D + L++ V+W +II+ ++++ ++ ++ + M + S+++ CS
Sbjct: 201 DGLV--LKTPVTWTAIITGYTKSGRSEVSLQLFNLMMESNVIPDKYVLSSILNACSVLGY 258
Query: 145 FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIG 204
+ G +H V + ++ N ++ Y K G+V +++FD + +I+SWTT+I
Sbjct: 259 LKGGKQIHAYVLR-SETKMDVSTYNVLIDFYTKCGRVKAGKALFDRLDVKNIISWTTMIA 317
Query: 205 GYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNN 264
GY+ EA L +M RM PD +++ C V L +HS ++K +
Sbjct: 318 GYMQNSYDWEAVELVGEMFRMGWKPDEYACSSVLTSCGSVDALQHGRQIHSYVIKVCLEH 377
Query: 265 EDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLL 324
++ + N L+ MY+KC L+ A+RVFD V SV + +MI GY++ GY A+ +F+ +
Sbjct: 378 DNFVTNALIDMYSKCNALDDAKRVFDVVTCHSVVYYNAMIEGYSRQGYLCGALEVFQEMR 437
Query: 325 KTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRIN 384
V P+ T + L A L L K+I I+ G ++ ++LI ++SKC I
Sbjct: 438 LKHVSPSFLTFVSLLGLSAALLCLQLSKQIHGLIIKYGFSLDKFTSSALIDVYSKCSCIR 497
Query: 385 KAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSAC 444
A+ VFE +KD+ VW+++ +GY + ++A L+ +Q + +P+ + ++ +A
Sbjct: 498 DARYVFEGTTNKDIVVWNSLFSGYNLQLKSEEAFKLYSDLQ-LSRERPNEFTFAALTTAA 556
Query: 445 SHSGMVDDGLSFF-KSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQ 503
S + G F + M+ +P I + LVD+ + G + A K I V
Sbjct: 557 SILASLPHGQQFHNQVMKMGLESDPFITN--ALVDMYAKCGSVEEAEK-IFSSSVWKDTA 613
Query: 504 VWAPLLSACMKHHNVE 519
W ++S +H VE
Sbjct: 614 CWNSMISMYAQHGKVE 629
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 121/396 (30%), Positives = 211/396 (53%), Gaps = 9/396 (2%)
Query: 35 LVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVR 94
L+L +N SI ++VH V+ G Q D F+ L+ Y K + + D+MP R
Sbjct: 46 LLLAPVSN-KSILYYRKVHCQVVLWGLQYDVFLSNLLLHSYFKIGSVFDAGTLFDKMPNR 104
Query: 95 LRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLE-LSASTFVSVVSGCSFRQG----I 149
++VSW+S++S +++ N++A+L E ++ L+ S++ C R G
Sbjct: 105 --NLVSWSSVVSMYTQLGYNEKALLYFLEFQRTCVDKLNEYILASIIRACVQRDGGEPGS 162
Query: 150 SMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNV 209
+H V K G ++ + S++ +YAK G++++AR +FD + + V+WT II GY
Sbjct: 163 QVHSYVIKSGF-GEDVYVGTSLVVLYAKHGEIDKARLVFDGLVLKTPVTWTAIITGYTKS 221
Query: 210 GNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLD 269
G + L N M +V PD V +++ C+ +G L +H+ +L+S +
Sbjct: 222 GRSEVSLQLFNLMMESNVIPDKYVLSSILNACSVLGYLKGGKQIHAYVLRSETKMDVSTY 281
Query: 270 NLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVR 329
N+L+ YTKCG ++ + +FD + K++ WT+MI GY Q Y EAV L + + +
Sbjct: 282 NVLIDFYTKCGRVKAGKALFDRLDVKNIISWTTMIAGYMQNSYDWEAVELVGEMFRMGWK 341
Query: 330 PNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEV 389
P+E ++ L++C + +L G++I Y++ LE + V +LI M+SKC ++ AK V
Sbjct: 342 PDEYACSSVLTSCGSVDALQHGRQIHSYVIKVCLEHDNFVTNALIDMYSKCNALDDAKRV 401
Query: 390 FERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQ 425
F+ V + ++AMI GY+ G AL +F +M+
Sbjct: 402 FDVVTCHSVVYYNAMIEGYSRQGYLCGALEVFQEMR 437
Score = 108 bits (270), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 73/251 (29%), Positives = 125/251 (49%), Gaps = 3/251 (1%)
Query: 236 NLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEK 295
NL+L ++ +H ++ G + L NLL+ Y K G + A +FD + +
Sbjct: 45 NLLLAPVSNKSILYYRKVHCQVVLWGLQYDVFLSNLLLHSYFKIGSVFDAGTLFDKMPNR 104
Query: 296 SVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSV-RPNEATLATTLSACAELGSLSKGKEI 354
++ W+S++ Y QLGY +A+ F +T V + NE LA+ + AC + G ++
Sbjct: 105 NLVSWSSVVSMYTQLGYNEKALLYFLEFQRTCVDKLNEYILASIIRACVQRDGGEPGSQV 164
Query: 355 EEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMG 414
Y++ +G + V TSL+ +++K G I+KA+ VF+ + K W+A+I GY G
Sbjct: 165 HSYVIKSGFGEDVYVGTSLVVLYAKHGEIDKARLVFDGLVLKTPVTWTAIITGYTKSGRS 224
Query: 415 DQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYL 474
+ +L LF M + PD V +SIL+ACS G + G + + + + Y
Sbjct: 225 EVSLQLFNLMME-SNVIPDKYVLSSILNACSVLGYLKGGKQIHAYVLRS-ETKMDVSTYN 282
Query: 475 CLVDLLGRAGR 485
L+D + GR
Sbjct: 283 VLIDFYTKCGR 293
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 61/118 (51%)
Query: 327 SVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKA 386
+V+ LA L A S+ +++ +VL GL+ + + L+H + K G + A
Sbjct: 35 NVKVKGRALANLLLAPVSNKSILYYRKVHCQVVLWGLQYDVFLSNLLLHSYFKIGSVFDA 94
Query: 387 KEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSAC 444
+F+++P+++L WS++++ Y G ++AL F + Q K + + SI+ AC
Sbjct: 95 GTLFDKMPNRNLVSWSSVVSMYTQLGYNEKALLYFLEFQRTCVDKLNEYILASIIRAC 152
>gi|297740136|emb|CBI30318.3| unnamed protein product [Vitis vinifera]
Length = 861
Score = 355 bits (911), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 202/658 (30%), Positives = 335/658 (50%), Gaps = 67/658 (10%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
M+ G + T+ +++ G +++T P V++AC ++ ++
Sbjct: 150 MVGGFAKVGDYINCFGTFRELIRCGARPDNYTLPFVIRACRDLKNL-------------- 195
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
Q L+DMY KC + +R + D+M + R +V+W +I ++ +E++++
Sbjct: 196 -------QMALVDMYVKCREIEDARFLFDKM--QERDLVTWTVMIGGYAECGKANESLVL 246
Query: 121 LKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGLLNN---------EIPLANSV 171
++M G+ V+VV C+ + G +MH K ++++ ++ L ++
Sbjct: 247 FEKMREEGVVPDKVAMVTVVFACA-KLG-AMH----KARIIDDYIQRKKFQLDVILGTAM 300
Query: 172 MSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDL 231
+ MYAK G V AR IFD + E +++SW+ +I Y G +A L M + PD
Sbjct: 301 IDMYAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFRMMLSSGMLPDK 360
Query: 232 VVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDA 291
+ +L+ C NL +H+ G + N LV Y+ L+ A +FD
Sbjct: 361 ITLASLLYACINCRNLTQVRQVHAQASVHGMLQNLIVANKLVHFYSYYRALDDAYGLFDG 420
Query: 292 VLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATL---------------- 335
+ + W+ M+GG+A++G F+ L++ RP+ TL
Sbjct: 421 MCVRDSVSWSVMVGGFAKVGDYMNCFGTFRELIRCGARPDNYTLPFCGNANESLVLFDKM 480
Query: 336 ------------ATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRI 383
T + ACA+LG++ K + I++YI + + + T++I M +KCG +
Sbjct: 481 REEGVVPDKVAMVTVVFACAKLGAMHKARTIDDYIQRKKFQLDVILGTAMIDMHAKCGCV 540
Query: 384 NKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSA 443
A+E+F+R+ +K++ WSAMI Y HG G +AL+LF M G+ P+ + S+L A
Sbjct: 541 ESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLF-PMMLRSGILPNKITLVSLLYA 599
Query: 444 CSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQ 503
CSH+G+V++GL FF M ++ + ++HY C+VDLLGRAGR D ALK I M VE
Sbjct: 600 CSHAGLVEEGLRFFSLMWEDYSVRADVKHYTCVVDLLGRAGRLDEALKLIESMTVEKDEG 659
Query: 504 VWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMD 563
+W L AC H +V L E AA +LL L P + G+YIL++N++ +AG W++ A R LM
Sbjct: 660 LWGAFLGACRTHKDVVLAEKAATSLLELQPQNPGHYILLSNIYANAGRWEDVAKTRDLMS 719
Query: 564 DRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKELHIKLLEAGYIAEADIV 621
RRL K PGW+ +E+D F GD +H S +I + LK L KL GY+ + + V
Sbjct: 720 QRRLKKIPGWTWIEVDNKSHQFSVGDTTHPRSKEIYEMLKSLGNKLELVGYVPDTNFV 777
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 100/316 (31%), Positives = 172/316 (54%), Gaps = 24/316 (7%)
Query: 130 ELSASTFVSVVSGC-SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIF 188
L+ ++S + C + Q +H G+L N I +AN ++ Y+ + +++A +F
Sbjct: 78 RLNPKFYISALVNCRNLTQVRQVHAQASVHGMLEN-IVVANKLIYFYSYYRALDDAYGLF 136
Query: 189 DEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLF 248
D + VSW+ ++GG+ VG+ FG ++ R PD +I C + NL
Sbjct: 137 DGMCVRDSVSWSVMVGGFAKVGDYINCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQ 196
Query: 249 LALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYA 308
+A LV MY KC ++E AR +FD + E+ + WT MIGGYA
Sbjct: 197 MA---------------------LVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYA 235
Query: 309 QLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQ 368
+ G +E++ LF+++ + V P++ + T + ACA+LG++ K + I++YI + +
Sbjct: 236 ECGKANESLVLFEKMREEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVI 295
Query: 369 VQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVE 428
+ T++I M++KCG + A+E+F+R+ +K++ WSAMI Y HG G +AL+LF +M
Sbjct: 296 LGTAMIDMYAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLF-RMMLSS 354
Query: 429 GLKPDAVVYTSILSAC 444
G+ PD + S+L AC
Sbjct: 355 GMLPDKITLASLLYAC 370
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 111/437 (25%), Positives = 201/437 (45%), Gaps = 52/437 (11%)
Query: 40 CANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVV 99
C N+ + ++VH+ G ++ V LI YS + + D M V R V
Sbjct: 91 CRNLTQV---RQVHAQASVHGMLENIVVANKLIYFYSYYRALDDAYGLFDGMCV--RDSV 145
Query: 100 SWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLG 159
SW+ ++ ++ +E+ G T V+ C + + M
Sbjct: 146 SWSVMVGGFAKVGDYINCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQM-------- 197
Query: 160 LLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLC 219
+++ MY K ++ +AR +FD++ E +V+WT +IGGY G NE+ L
Sbjct: 198 ----------ALVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLF 247
Query: 220 NQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKC 279
+MR V PD V + ++ CA++G + A + + + + + L ++ MY KC
Sbjct: 248 EKMREEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKC 307
Query: 280 GDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTL 339
G +E AR +FD + EK+V W++MI Y G +A++LF+ +L + + P++ TLA+ L
Sbjct: 308 GCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFRMMLSSGMLPDKITLASLL 367
Query: 340 SACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLA 399
AC +L++ +++ ++G+ N V L+H +S ++ A +F+ + +D
Sbjct: 368 YACINCRNLTQVRQVHAQASVHGMLQNLIVANKLVHFYSYYRALDDAYGLFDGMCVRDSV 427
Query: 400 VWSAMINGYA----------------------------IHGMGDQALNLFYKMQHVEGLK 431
WS M+ G+A G +++L LF KM+ EG+
Sbjct: 428 SWSVMVGGFAKVGDYMNCFGTFRELIRCGARPDNYTLPFCGNANESLVLFDKMRE-EGVV 486
Query: 432 PDAVVYTSILSACSHSG 448
PD V +++ AC+ G
Sbjct: 487 PDKVAMVTVVFACAKLG 503
>gi|449453904|ref|XP_004144696.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33170-like [Cucumis sativus]
Length = 840
Score = 355 bits (911), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 198/624 (31%), Positives = 338/624 (54%), Gaps = 42/624 (6%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
++ NG E L +S M G + +T VL+AC+ ++ + GK +H + +K+
Sbjct: 105 LVSGYCKNGCEVEGLRQFSQMWSDGQKPSQYTLGSVLRACSTLSLLHTGKMIHCYAIKIQ 164
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+ + FV TGL+DMYSKC + + + +P R ++ V W ++++ +++ + +AI
Sbjct: 165 LEANIFVATGLVDMYSKCKCLLEAEYLFFSLPDR-KNYVQWTAMLTGYAQNGESLKAIQC 223
Query: 121 LKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
KEM G+E + TF S+++ C+ + G +H C+ G N + + ++++ MYA
Sbjct: 224 FKEMRNQGMESNHFTFPSILTACTSISAYAFGRQVHGCIIWSGFGPN-VYVQSALVDMYA 282
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K G + AR I D + +V W ++I G V G + EA L ++M + D + +
Sbjct: 283 KCGDLASARMILDTMEIDDVVCWNSMIVGCVTHGYMEEALVLFHKMHNRDIRIDDFTYPS 342
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
++ A NL + S+HSL +K+G++ + N LV MY K G+L A VF+ +L+K
Sbjct: 343 VLKSLASCKNLKIGESVHSLTIKTGFDACKTVSNALVDMYAKQGNLSCALDVFNKILDKD 402
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEE 356
V WTS++ GY G+ +A+ LF + V ++ +A SACAEL + G+++
Sbjct: 403 VISWTSLVTGYVHNGFHEKALQLFCDMRTARVDLDQFVVACVFSACAELTVIEFGRQVHA 462
Query: 357 YIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQ 416
+ + S + SLI M++KCG + A VF+ + +++ W+A+I GYA
Sbjct: 463 NFIKSSAGSLLSAENSLITMYAKCGCLEDAIRVFDSMETRNVISWTAIIVGYA------- 515
Query: 417 ALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCL 476
+G+V+ G S+F+SM+ +GI+P+ +HY C+
Sbjct: 516 -----------------------------QNGLVETGQSYFESMEKVYGIKPASDHYACM 546
Query: 477 VDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGST 536
+DLLGRAG+ + A ++ M VE A +W LLSAC H N+ELGE A KNL+ L P ++
Sbjct: 547 IDLLGRAGKINEAEHLLNRMDVEPDATIWKSLLSACRVHGNLELGERAGKNLIKLEPSNS 606
Query: 537 GNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSV 596
Y+L++N+F+ AG W++AA R M + KEPG+S +E+ V F++ DRSH L+
Sbjct: 607 LPYVLLSNMFSVAGRWEDAAHIRRAMKTMGINKEPGYSWIEMKSQVHTFISEDRSHPLAA 666
Query: 597 DIRKTLKELHIKLLEAGYIAEADI 620
+I + E+ I + EAG++ + +
Sbjct: 667 EIYSKIDEMMILIKEAGHVPDMNF 690
Score = 135 bits (339), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 93/377 (24%), Positives = 179/377 (47%), Gaps = 37/377 (9%)
Query: 168 ANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQ------ 221
+N ++S +K G+V+EAR +FD++ +W +I Y N+GN+ EA L N+
Sbjct: 40 SNQLLSELSKNGRVDEARKLFDQMPYRDKYTWNIMISAYANLGNLVEARKLFNETPIKNS 99
Query: 222 -------------------MRRMS------VTPDLVVFLNLILGCAQVGNLFLALSMHSL 256
+R+ S P +++ C+ + L +H
Sbjct: 100 ITWSSLVSGYCKNGCEVEGLRQFSQMWSDGQKPSQYTLGSVLRACSTLSLLHTGKMIHCY 159
Query: 257 LLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFL-WTSMIGGYAQLGYPSE 315
+K + LV MY+KC L A +F ++ ++ ++ WT+M+ GYAQ G +
Sbjct: 160 AIKIQLEANIFVATGLVDMYSKCKCLLEAEYLFFSLPDRKNYVQWTAMLTGYAQNGESLK 219
Query: 316 AVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIH 375
A+ FK + + N T + L+AC + + + G+++ I+ +G N VQ++L+
Sbjct: 220 AIQCFKEMRNQGMESNHFTFPSILTACTSISAYAFGRQVHGCIIWSGFGPNVYVQSALVD 279
Query: 376 MFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAV 435
M++KCG + A+ + + + D+ W++MI G HG ++AL LF+KM H ++ D
Sbjct: 280 MYAKCGDLASARMILDTMEIDDVVCWNSMIVGCVTHGYMEEALVLFHKM-HNRDIRIDDF 338
Query: 436 VYTSILSACSHSGMVDDGLSFFK-SMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIH 494
Y S+L + + + G S ++++ F ++ + LVD+ + G AL +
Sbjct: 339 TYPSVLKSLASCKNLKIGESVHSLTIKTGFDACKTVSN--ALVDMYAKQGNLSCALDVFN 396
Query: 495 EMPVEVQAQVWAPLLSA 511
++ ++ W L++
Sbjct: 397 KI-LDKDVISWTSLVTG 412
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 74/252 (29%), Positives = 131/252 (51%), Gaps = 6/252 (2%)
Query: 270 NLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVR 329
N+++S Y G+L AR++F+ K+ W+S++ GY + G E + F ++ +
Sbjct: 72 NIMISAYANLGNLVEARKLFNETPIKNSITWSSLVSGYCKNGCEVEGLRQFSQMWSDGQK 131
Query: 330 PNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEV 389
P++ TL + L AC+ L L GK I Y + LE+N V T L+ M+SKC + +A+ +
Sbjct: 132 PSQYTLGSVLRACSTLSLLHTGKMIHCYAIKIQLEANIFVATGLVDMYSKCKCLLEAEYL 191
Query: 390 FERVPD-KDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSG 448
F +PD K+ W+AM+ GYA +G +A+ F +M++ +G++ + + SIL+AC+
Sbjct: 192 FFSLPDRKNYVQWTAMLTGYAQNGESLKAIQCFKEMRN-QGMESNHFTFPSILTACTSIS 250
Query: 449 MVDDGLSFFKS-MQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAP 507
G + S FG P++ LVD+ + G A + M ++ W
Sbjct: 251 AYAFGRQVHGCIIWSGFG--PNVYVQSALVDMYAKCGDLASARMILDTMEID-DVVCWNS 307
Query: 508 LLSACMKHHNVE 519
++ C+ H +E
Sbjct: 308 MIVGCVTHGYME 319
>gi|125591422|gb|EAZ31772.1| hypothetical protein OsJ_15924 [Oryza sativa Japonica Group]
Length = 855
Score = 355 bits (911), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 217/623 (34%), Positives = 324/623 (52%), Gaps = 67/623 (10%)
Query: 58 KVGFQQDAFVQTGLIDMYSKCS--DFVSSRKVLDEMPVRL-------------------- 95
K F D V+T L+DM+ +C DF S E P
Sbjct: 156 KFDFWGDPDVETALVDMFVRCGYVDFASRLFSQIERPTIFCRNSMLAGYAKLYGIDHAIE 215
Query: 96 -------RSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGC----S 144
R VVSWN +I+A S++ EA+ ++ EM G+ L ++T+ S ++ C S
Sbjct: 216 YFEDMAERDVVSWNMMIAALSQSGRVREALGLVVEMHRKGVRLDSTTYTSSLTACARLFS 275
Query: 145 FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIG 204
G +H V + L + +A++++ +YAK G EA+ +F+ + + + VSWT +IG
Sbjct: 276 LGWGKQLHAKVIR-SLPQIDPYVASALIELYAKCGSFKEAKRVFNSLQDRNSVSWTVLIG 334
Query: 205 GYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNN 264
G + +++ L NQMR + D LI GC +L L +HSL LKSG+N
Sbjct: 335 GSLQYECFSKSVELFNQMRAELMAIDQFALATLISGCFNRMDLCLGRQLHSLCLKSGHNR 394
Query: 265 EDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFK--- 321
+ N L+S+Y KCGDL+ A VF ++ E+ + WTSMI Y+Q+G +A F
Sbjct: 395 AIVVSNSLISLYAKCGDLQNAEFVFSSMSERDIVSWTSMITAYSQIGNIIKAREFFDGMA 454
Query: 322 -----------------------------RLLKTSVRPNEATLATTLSACAELGSLSKGK 352
L + V P+ T T CA++G+ G
Sbjct: 455 TRNAITWNAMLGAYIQHGAEEDGLKMYSAMLSQKDVTPDWVTYVTLFRGCADIGANKLGD 514
Query: 353 EIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHG 412
+I + V GL N V + I M+SKCGRI++A+++F+ + KD+ W+AMI GY+ HG
Sbjct: 515 QIIGHTVKAGLILNVSVANAAITMYSKCGRISEAQKLFDLLNGKDVVSWNAMITGYSQHG 574
Query: 413 MGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEH 472
MG QA F M +G KPD + Y ++LS CSHSG+V +G +F M GI P +EH
Sbjct: 575 MGKQAAKTFDDMLS-KGAKPDYISYVAVLSGCSHSGLVQEGKLYFDMMTRVHGISPGLEH 633
Query: 473 YLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLN 532
+ C+VDLLGRAG A I +MP++ A+VW LLSAC H N EL E AAK++ L+
Sbjct: 634 FSCMVDLLGRAGHLTEAKDLIDKMPMKPTAEVWGALLSACKIHGNDELAELAAKHVFELD 693
Query: 533 PGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSH 592
+G+Y+L+A +++ AG ++A R LM D+ + K PG+S +E++ V VF A D SH
Sbjct: 694 SPDSGSYMLLAKIYSDAGKSDDSAQVRKLMRDKGIKKNPGYSWMEVENKVHVFKADDVSH 753
Query: 593 HLSVDIRKTLKELHIKLLEAGYI 615
+ IR + EL K+ GY+
Sbjct: 754 PQVIAIRNKMDELMEKIAHLGYV 776
Score = 188 bits (477), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 135/500 (27%), Positives = 238/500 (47%), Gaps = 45/500 (9%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI + +G E L M + GV +S T+ L ACA + S+ GK++H+ V++
Sbjct: 231 MIAALSQSGRVREALGLVVEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSL 290
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
Q D +V + LI++Y+KC F +++V + + + R+ VSW +I + +++ +
Sbjct: 291 PQIDPYVASALIELYAKCGSFKEAKRVFNSL--QDRNSVSWTVLIGGSLQYECFSKSVEL 348
Query: 121 LKEMWVLGLELSASTFVSVVSGCSFRQ----GISMHCCVYKLGLLNNEIPLANSVMSMYA 176
+M + + +++SGC R G +H K G N I ++NS++S+YA
Sbjct: 349 FNQMRAELMAIDQFALATLISGCFNRMDLCLGRQLHSLCLKSG-HNRAIVVSNSLISLYA 407
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQM-------------- 222
K G + A +F + E IVSWT++I Y +GN+ +A + M
Sbjct: 408 KCGDLQNAEFVFSSMSERDIVSWTSMITAYSQIGNIIKAREFFDGMATRNAITWNAMLGA 467
Query: 223 ------------------RRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNN 264
+ VTPD V ++ L GCA +G L + +K+G
Sbjct: 468 YIQHGAEEDGLKMYSAMLSQKDVTPDWVTYVTLFRGCADIGANKLGDQIIGHTVKAGLIL 527
Query: 265 EDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLL 324
+ N ++MY+KCG + A+++FD + K V W +MI GY+Q G +A F +L
Sbjct: 528 NVSVANAAITMYSKCGRISEAQKLFDLLNGKDVVSWNAMITGYSQHGMGKQAAKTFDDML 587
Query: 325 KTSVRPNEATLATTLSACAELGSLSKGKEIEEYIV-LNGLESNRQVQTSLIHMFSKCGRI 383
+P+ + LS C+ G + +GK + + ++G+ + + ++ + + G +
Sbjct: 588 SKGAKPDYISYVAVLSGCSHSGLVQEGKLYFDMMTRVHGISPGLEHFSCMVDLLGRAGHL 647
Query: 384 NKAKEVFERVPDKDLA-VWSAMINGYAIHGMGDQALNLFYKMQHVEGL-KPDAVVYTSIL 441
+AK++ +++P K A VW A+++ IHG D+ L K HV L PD+ Y +
Sbjct: 648 TEAKDLIDKMPMKPTAEVWGALLSACKIHG-NDELAELAAK--HVFELDSPDSGSYMLLA 704
Query: 442 SACSHSGMVDDGLSFFKSMQ 461
S +G DD K M+
Sbjct: 705 KIYSDAGKSDDSAQVRKLMR 724
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 115/486 (23%), Positives = 217/486 (44%), Gaps = 58/486 (11%)
Query: 37 LKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVL-------- 88
L++C + ++ + +H ++ VG F+Q L+ Y C +R++L
Sbjct: 27 LRSCGSRGALAGARALHGRLVTVGLASAVFLQNTLLHAYLSCGALSDARRLLRADIKEPN 86
Query: 89 ------------------------DEMPVRLRSVVSWNSIISAHSR------AC----LN 114
D MP R V SWN+++S SR +C
Sbjct: 87 VITHNIMMNGYAKQGSLSDAEELFDRMP--RRDVASWNTLMSDTSRPAGSWMSCGALGCR 144
Query: 115 DEAILVLKEMWVL---GLELSASTFVSVVSGCSFRQGISMHCCVYKLGLLNNEIPLANSV 171
+ A +L W G + V + C + + ++ + I NS+
Sbjct: 145 ELAPQLLGLFWKFDFWGDPDVETALVDMFVRCGY---VDFASRLFS-QIERPTIFCRNSM 200
Query: 172 MSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDL 231
++ YAK ++ A F+++ E +VSW +I G V EA GL +M R V D
Sbjct: 201 LAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREALGLVVEMHRKGVRLDS 260
Query: 232 VVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDA 291
+ + + CA++ +L +H+ +++S + + + L+ +Y KCG + A+RVF++
Sbjct: 261 TTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKCGSFKEAKRVFNS 320
Query: 292 VLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKG 351
+ +++ WT +IGG Q S++V LF ++ + ++ LAT +S C L G
Sbjct: 321 LQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALATLISGCFNRMDLCLG 380
Query: 352 KEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIH 411
+++ + +G V SLI +++KCG + A+ VF + ++D+ W++MI Y+
Sbjct: 381 RQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSERDIVSWTSMITAYS-- 438
Query: 412 GMGDQALNLFYKMQHVEGLKP-DAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSI 470
Q N+ + +G+ +A+ + ++L A G +DGL + +M S + P
Sbjct: 439 ----QIGNIIKAREFFDGMATRNAITWNAMLGAYIQHGAEEDGLKMYSAMLSQKDVTPDW 494
Query: 471 EHYLCL 476
Y+ L
Sbjct: 495 VTYVTL 500
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 71/338 (21%), Positives = 127/338 (37%), Gaps = 88/338 (26%)
Query: 322 RLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCG 381
RLL +V LA L +C G+L+ + + +V GL S +Q +L+H + CG
Sbjct: 13 RLLPHAV---TQALADALRSCGSRGALAGARALHGRLVTVGLASAVFLQNTLLHAYLSCG 69
Query: 382 RINKAK--------------------------------EVFERVPDKDLAVWSAMIN--- 406
++ A+ E+F+R+P +D+A W+ +++
Sbjct: 70 ALSDARRLLRADIKEPNVITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSDTS 129
Query: 407 ----------GYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSF 456
+ Q L LF+K D V T+++ G VD
Sbjct: 130 RPAGSWMSCGALGCRELAPQLLGLFWKFD----FWGDPDVETALVDMFVRCGYVDFASRL 185
Query: 457 FKSMQSN---------------FGIEPSIEHYL-----------CLVDLLGRAGRFDLAL 490
F ++ +GI+ +IE++ ++ L ++GR AL
Sbjct: 186 FSQIERPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREAL 245
Query: 491 KTIHEM---PVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMA--NL 545
+ EM V + + + L+AC + ++ G+ ++ P Y+ A L
Sbjct: 246 GLVVEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLP-QIDPYVASALIEL 304
Query: 546 FTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQ 583
+ G +KEA + DR W+ V I GS+Q
Sbjct: 305 YAKCGSFKEAKRVFNSLQDR---NSVSWT-VLIGGSLQ 338
>gi|356532311|ref|XP_003534717.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g04370-like [Glycine max]
Length = 755
Score = 355 bits (911), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 206/613 (33%), Positives = 328/613 (53%), Gaps = 17/613 (2%)
Query: 6 TNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDA 65
+ G E S + M + G+ +S T VL ++ + + +H + GF D
Sbjct: 138 SRTGRVPEAFSLFDEMRRQGIQPSSVT---VLSLLFGVSELAHVQCLHGCAILYGFMSDI 194
Query: 66 FVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMW 125
+ ++++Y KC + SRK+ D M R +VSWNS+ISA+++ E +L+LK M
Sbjct: 195 NLSNSMLNVYGKCGNIEYSRKLFDYMD--HRDLVSWNSLISAYAQIGNICEVLLLLKTMR 252
Query: 126 VLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGLLNN---EIPLANSVMSMYAKFGKVN 182
+ G E TF SV+S + R + + C++ L + + S++ +Y K GK++
Sbjct: 253 LQGFEAGPQTFGSVLSVAASRGELKLGRCLHGQILRAGFYLDAHVETSLIVVYLKGGKID 312
Query: 183 EARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCA 242
A +F+ + +V WT +I G V G+ ++A + QM + V P ++I CA
Sbjct: 313 IAFRMFERSSDKDVVLWTAMISGLVQNGSADKALAVFRQMLKFGVKPSTATMASVITACA 372
Query: 243 QVGNLFLALSMHSLLLKSGYNNEDPLD----NLLVSMYTKCGDLELARRVFDAVLEKSVF 298
Q+G+ L S+ +L+ E PLD N LV+MY KCG L+ + VFD + + +
Sbjct: 373 QLGSYNLGTSILGYILR----QELPLDVATQNSLVTMYAKCGHLDQSSIVFDMMNRRDLV 428
Query: 299 LWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYI 358
W +M+ GYAQ GY EA+ LF + + P+ T+ + L CA G L GK I ++
Sbjct: 429 SWNAMVTGYAQNGYVCEALFLFNEMRSDNQTPDSITIVSLLQGCASTGQLHLGKWIHSFV 488
Query: 359 VLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQAL 418
+ NGL V TSL+ M+ KCG ++ A+ F ++P DL WSA+I GY HG G+ AL
Sbjct: 489 IRNGLRPCILVDTSLVDMYCKCGDLDTAQRCFNQMPSHDLVSWSAIIVGYGYHGKGEAAL 548
Query: 419 NLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVD 478
+ K G+KP+ V++ S+LS+CSH+G+V+ GL+ ++SM +FGI P +EH+ C+VD
Sbjct: 549 RFYSKFLE-SGMKPNHVIFLSVLSSCSHNGLVEQGLNIYESMTKDFGIAPDLEHHACVVD 607
Query: 479 LLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGN 538
LL RAGR + A + + V +L AC + N ELG+ A ++L L P GN
Sbjct: 608 LLSRAGRVEEAYNVYKKKFPDPVLDVLGIILDACRANGNNELGDTIANDILMLRPMDAGN 667
Query: 539 YILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDI 598
++ +A+ + S W+E A M L K PGWS ++I G++ F SH +I
Sbjct: 668 FVQLAHCYASINKWEEVGEAWTYMRSLGLKKIPGWSFIDIHGTITTFFTDHNSHPQFQEI 727
Query: 599 RKTLKELHIKLLE 611
TLK L ++++
Sbjct: 728 VCTLKILRKEMIK 740
Score = 283 bits (723), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 163/497 (32%), Positives = 279/497 (56%), Gaps = 6/497 (1%)
Query: 2 IRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGF 61
I + + G+ + L+TY+SML+T V +++TFP +LKAC+ +N G +H +L G
Sbjct: 33 INHHSTQGAHHQVLATYASMLKTHVPSDAYTFPSLLKACSFLNLFSLGLTLHQRILVSGL 92
Query: 62 QQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVL 121
DA++ + LI+ Y+K +RKV D MP R +VV W +II +SR EA +
Sbjct: 93 SLDAYIASSLINFYAKFGFADVARKVFDYMPER--NVVPWTTIIGCYSRTGRVPEAFSLF 150
Query: 122 KEMWVLGLELSASTFVSVVSGCSFRQGIS-MHCCVYKLGLLNNEIPLANSVMSMYAKFGK 180
EM G++ S+ T +S++ G S + +H C G ++ +I L+NS++++Y K G
Sbjct: 151 DEMRRQGIQPSSVTVLSLLFGVSELAHVQCLHGCAILYGFMS-DINLSNSMLNVYGKCGN 209
Query: 181 VNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILG 240
+ +R +FD + +VSW ++I Y +GN+ E L MR F +++
Sbjct: 210 IEYSRKLFDYMDHRDLVSWNSLISAYAQIGNICEVLLLLKTMRLQGFEAGPQTFGSVLSV 269
Query: 241 CAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLW 300
A G L L +H +L++G+ + ++ L+ +Y K G +++A R+F+ +K V LW
Sbjct: 270 AASRGELKLGRCLHGQILRAGFYLDAHVETSLIVVYLKGGKIDIAFRMFERSSDKDVVLW 329
Query: 301 TSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVL 360
T+MI G Q G +A+ +F+++LK V+P+ AT+A+ ++ACA+LGS + G I YI+
Sbjct: 330 TAMISGLVQNGSADKALAVFRQMLKFGVKPSTATMASVITACAQLGSYNLGTSILGYILR 389
Query: 361 NGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNL 420
L + Q SL+ M++KCG ++++ VF+ + +DL W+AM+ GYA +G +AL L
Sbjct: 390 QELPLDVATQNSLVTMYAKCGHLDQSSIVFDMMNRRDLVSWNAMVTGYAQNGYVCEALFL 449
Query: 421 FYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLL 480
F +M+ + PD++ S+L C+ +G + G + S G+ P I LVD+
Sbjct: 450 FNEMRS-DNQTPDSITIVSLLQGCASTGQLHLG-KWIHSFVIRNGLRPCILVDTSLVDMY 507
Query: 481 GRAGRFDLALKTIHEMP 497
+ G D A + ++MP
Sbjct: 508 CKCGDLDTAQRCFNQMP 524
Score = 198 bits (503), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 117/360 (32%), Positives = 197/360 (54%), Gaps = 9/360 (2%)
Query: 100 SWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCSFRQ----GISMHCCV 155
S N+ I+ HS + + + M + A TF S++ CSF G+++H +
Sbjct: 28 SVNATINHHSTQGAHHQVLATYASMLKTHVPSDAYTFPSLLKACSFLNLFSLGLTLHQRI 87
Query: 156 YKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEA 215
G L+ + +A+S+++ YAKFG + AR +FD + E ++V WTTIIG Y G V EA
Sbjct: 88 LVSG-LSLDAYIASSLINFYAKFGFADVARKVFDYMPERNVVPWTTIIGCYSRTGRVPEA 146
Query: 216 FGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSM 275
F L ++MRR + P V L+L+ G +++ ++ +H + G+ ++ L N ++++
Sbjct: 147 FSLFDEMRRQGIQPSSVTVLSLLFGVSELAHV---QCLHGCAILYGFMSDINLSNSMLNV 203
Query: 276 YTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATL 335
Y KCG++E +R++FD + + + W S+I YAQ+G E + L K + T
Sbjct: 204 YGKCGNIEYSRKLFDYMDHRDLVSWNSLISAYAQIGNICEVLLLLKTMRLQGFEAGPQTF 263
Query: 336 ATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPD 395
+ LS A G L G+ + I+ G + V+TSLI ++ K G+I+ A +FER D
Sbjct: 264 GSVLSVAASRGELKLGRCLHGQILRAGFYLDAHVETSLIVVYLKGGKIDIAFRMFERSSD 323
Query: 396 KDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLS 455
KD+ +W+AMI+G +G D+AL +F +M G+KP S+++AC+ G + G S
Sbjct: 324 KDVVLWTAMISGLVQNGSADKALAVFRQMLKF-GVKPSTATMASVITACAQLGSYNLGTS 382
Score = 108 bits (271), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 102/396 (25%), Positives = 175/396 (44%), Gaps = 46/396 (11%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI NGS ++ L+ + ML+ GV ++ T V+ ACA + S G + ++L+
Sbjct: 332 MISGLVQNGSADKALAVFRQMLKFGVKPSTATMASVITACAQLGSYNLGTSILGYILRQE 391
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
D Q L+ MY+KC S V D M R +VSWN++++ +++ EA+ +
Sbjct: 392 LPLDVATQNSLVTMYAKCGHLDQSSIVFDMM--NRRDLVSWNAMVTGYAQNGYVCEALFL 449
Query: 121 LKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
EM + T VS++ GC+ G +H V + G L I + S++ MY
Sbjct: 450 FNEMRSDNQTPDSITIVSLLQGCASTGQLHLGKWIHSFVIRNG-LRPCILVDTSLVDMYC 508
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K G ++ A+ F+++ +VSW+ II GY G A ++ + P+ V+FL+
Sbjct: 509 KCGDLDTAQRCFNQMPSHDLVSWSAIIVGYGYHGKGEAALRFYSKFLESGMKPNHVIFLS 568
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
++ C+ G + L+++ + K + DLE V D +
Sbjct: 569 VLSSCSHNGLVEQGLNIYESMTKD---------------FGIAPDLEHHACVVDLL---- 609
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEI-E 355
++ G EA N++K+ P L L AC G+ G I
Sbjct: 610 -----------SRAGRVEEAYNVYKKKFPD---PVLDVLGIILDACRANGNNELGDTIAN 655
Query: 356 EYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFE 391
+ ++L +++ VQ L H ++ INK +EV E
Sbjct: 656 DILMLRPMDAGNFVQ--LAHCYAS---INKWEEVGE 686
>gi|357470275|ref|XP_003605422.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355506477|gb|AES87619.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 839
Score = 355 bits (910), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 216/613 (35%), Positives = 332/613 (54%), Gaps = 16/613 (2%)
Query: 21 MLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG-FQQDAFVQTGLIDMYSK-C 78
+LQ GV+ N + F V++AC G + VLK G F V LIDM+ K C
Sbjct: 147 LLQDGVYPNEYCFTAVIRACLKGGFFKTGLCLFGFVLKTGYFDSHVCVGCELIDMFVKGC 206
Query: 79 S--DFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVL-GLELSAST 135
S D S+RKV D+M R ++VV+W +I+ ++ NDEAI + EM V G T
Sbjct: 207 SLADLESARKVFDKM--REKNVVTWTLMITRLAQYGYNDEAIDLFLEMLVSSGYVPDRFT 264
Query: 136 FVSVVSGCSFRQ----GISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEI 191
++S C+ Q G +H V + GL+ ++ + S++ MYAK G V EAR +FD +
Sbjct: 265 LTGLISVCAEIQFLSLGKELHSWVIRSGLVL-DLCVGCSLVDMYAKCGLVQEARKVFDGM 323
Query: 192 GETSIVSWTTIIGGYVNVGNVNEAFGL---CNQMRRMSVTPDLVVFLNLILGCAQVGNLF 248
E +++SWT ++ GYV G E + N + + V P+ F ++ CA + +
Sbjct: 324 REHNVMSWTALVNGYVRGGGGYEREAMRMFSNMLLQGGVAPNCFTFSGVLKACASLPDFD 383
Query: 249 LALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYA 308
+H +K G + D + N LVS+Y K G +E AR+ FD + EK++ T +
Sbjct: 384 FGEQVHGQTIKLGLSAIDCVGNGLVSVYAKSGRMESARKCFDVLFEKNLVSETVVDDTNV 443
Query: 309 QLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQ 368
+ + +L + + + T A+ LS A +G++ KG++I +V G ++
Sbjct: 444 KDFNLNSEQDLDREVEYVGSGVSSFTYASLLSGAACIGTIGKGEQIHAMVVKIGFRTDLS 503
Query: 369 VQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVE 428
V +LI M+SKCG A +VF + D ++ W+++ING+A HG +AL LFY M
Sbjct: 504 VNNALISMYSKCGNKEAALQVFNDMEDCNVITWTSIINGFAKHGFASKALELFYNMLET- 562
Query: 429 GLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDL 488
G+KP+ V Y ++LSACSH G++D+ F SM+ N GI P +EHY C+VDLLGR+G
Sbjct: 563 GVKPNDVTYIAVLSACSHVGLIDEAWKHFTSMRDNHGIVPRMEHYACMVDLLGRSGLLSE 622
Query: 489 ALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTS 548
A++ I+ MP + A VW L +C H N +LGE+AAK +L P YIL++NL+ +
Sbjct: 623 AIEFINSMPFDADALVWRTFLGSCRVHRNTKLGEHAAKMILEREPHDPATYILLSNLYAT 682
Query: 549 AGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKELHIK 608
G W++ A R M +++TKE G S +E++ V F GD H + I + L EL +K
Sbjct: 683 EGRWEDVAAIRKNMKQKQITKEAGSSWIEVENQVHKFHVGDTLHPKAQQIYEKLDELALK 742
Query: 609 LLEAGYIAEADIV 621
+ GY+ D V
Sbjct: 743 IKNVGYVPNTDFV 755
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 136/524 (25%), Positives = 248/524 (47%), Gaps = 20/524 (3%)
Query: 7 NNGSFEETLSTYSSMLQTGVHGNSF-TFPLVLKACANINSIWDGKRVHSHVLKVGFQQDA 65
N + ++T + H N T L+LK C + GK +H + D
Sbjct: 28 NPQQLHKAITTLNLTDTESTHNNKLITSSLLLKQCIRTKNTHLGKLLHHKLTTSNLPLDT 87
Query: 66 FVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIIS--AHSRACLNDEAILVLKE 123
+ LI +YSK +D +++ + M R VVS++SIIS A++R CL +A+ + +
Sbjct: 88 LLLNSLITLYSKSNDPITAFSIFQSMENSKRDVVSYSSIISCFANNRNCL--KAVEMFDQ 145
Query: 124 MWVL-GLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAK- 177
+ + G+ + F +V+ C F+ G+ + V K G ++ + + ++ M+ K
Sbjct: 146 LLLQDGVYPNEYCFTAVIRACLKGGFFKTGLCLFGFVLKTGYFDSHVCVGCELIDMFVKG 205
Query: 178 --FGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMS-VTPDLVVF 234
+ AR +FD++ E ++V+WT +I G +EA L +M S PD
Sbjct: 206 CSLADLESARKVFDKMREKNVVTWTLMITRLAQYGYNDEAIDLFLEMLVSSGYVPDRFTL 265
Query: 235 LNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLE 294
LI CA++ L L +HS +++SG + + LV MY KCG ++ AR+VFD + E
Sbjct: 266 TGLISVCAEIQFLSLGKELHSWVIRSGLVLDLCVGCSLVDMYAKCGLVQEARKVFDGMRE 325
Query: 295 KSVFLWTSMIGGYAQ--LGYPSEAVNLFKR-LLKTSVRPNEATLATTLSACAELGSLSKG 351
+V WT+++ GY + GY EA+ +F LL+ V PN T + L ACA L G
Sbjct: 326 HNVMSWTALVNGYVRGGGGYEREAMRMFSNMLLQGGVAPNCFTFSGVLKACASLPDFDFG 385
Query: 352 KEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIH 411
+++ + GL + V L+ +++K GR+ A++ F+ + +K+L + + +
Sbjct: 386 EQVHGQTIKLGLSAIDCVGNGLVSVYAKSGRMESARKCFDVLFEKNLVSETVVDDTNVKD 445
Query: 412 GMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIE 471
+ +L ++++V G + Y S+LS + G + G +M G +
Sbjct: 446 FNLNSEQDLDREVEYV-GSGVSSFTYASLLSGAACIGTIGKGEQ-IHAMVVKIGFRTDLS 503
Query: 472 HYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKH 515
L+ + + G + AL+ ++M + W +++ KH
Sbjct: 504 VNNALISMYSKCGNKEAALQVFNDME-DCNVITWTSIINGFAKH 546
>gi|449441113|ref|XP_004138328.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like [Cucumis sativus]
Length = 990
Score = 355 bits (910), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 205/635 (32%), Positives = 353/635 (55%), Gaps = 24/635 (3%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTG--VHGNSFTFPLVLKACANINSIWDGKRVHSHVLK 58
+IR + NG + E + S+L++G + + T +L C+ ++ G +H +K
Sbjct: 282 LIRGFSENGFWLEAYRAFRSLLESGDGLIPDVATMVTLLPVCSGEGNVDVGMVIHGMAVK 341
Query: 59 VGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAI 118
+G + V LIDMYSKC + + + + +SVVSWNS+I A+SR E
Sbjct: 342 LGLVHELMVCNALIDMYSKCGCLSEAAILFRK--IENKSVVSWNSMIGAYSREGFVFETF 399
Query: 119 LVLKEMWVLG--LELSASTFVSVVSGC-------SFR--QGISM-HCCVYKLGLLNNEIP 166
+L++MW+ +E++ T ++++ C S R G S+ H YK L+NN
Sbjct: 400 DLLRKMWMEEELMEVNEVTILNLLPACLEESELLSLRALHGYSLRHSFQYK-ELINN--- 455
Query: 167 LANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMS 226
+ ++ YAK G + A +F + S+ SW +IGG+ G+ +A +M R+
Sbjct: 456 ---AFIAAYAKCGSLVFAEHVFFGMNTKSVSSWNAVIGGHAQNGDPIKALDFYFEMTRLG 512
Query: 227 VTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELAR 286
+ PD ++L+L C ++G L +H +L++G + L+S+Y C R
Sbjct: 513 ILPDDFSIVSLLLACGRLGLLQYGKEIHGFVLRNGLEMNSFVAVSLLSLYFHCSKPFYGR 572
Query: 287 RVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELG 346
F+ + +K+ W +M+ GY+Q P+EA++LF+++L + P+E +A+ L AC++L
Sbjct: 573 TYFETMGDKNSVCWNAMLSGYSQNELPNEALSLFRQMLSDGLEPDEIAIASILGACSQLS 632
Query: 347 SLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMIN 406
+L GKE+ + + N L + V SL+ M++K G + ++ +F R+ K++A W+ MI
Sbjct: 633 ALGLGKEVHCFALKNSLMEDNFVACSLMDMYAKSGFLGHSQRIFNRLNGKEVASWNVMIT 692
Query: 407 GYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGI 466
G+ +HG G++A+ LF M+ + +PD + +L AC H+G+V +GL++ MQ+ + +
Sbjct: 693 GFGVHGQGNKAVELFEDMKRSDK-QPDRFTFLGVLQACCHAGLVSEGLNYLAQMQTLYKL 751
Query: 467 EPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAK 526
EP +EHY C++D+LGRAGR + AL I+EMP E A++W+ LLS+ + + ++E+GE A+
Sbjct: 752 EPELEHYACVIDMLGRAGRLNEALNFINEMPEEPDAKIWSSLLSSSITYVDLEMGEKFAE 811
Query: 527 NLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFV 586
LL L +YIL++NL+ +AG W R M D L K+ G S +E+ G V F+
Sbjct: 812 KLLALEANKADSYILLSNLYATAGKWDVVRMVRQKMKDLSLQKDVGCSWIELRGKVYSFI 871
Query: 587 AGDRSHHLSVDIRKTLKELHIKLLEAGYIAEADIV 621
AG+ S+ S +IRK L +++E GY + V
Sbjct: 872 AGENSNPSSDEIRKMWNRLEKQIVEIGYTPDCSCV 906
Score = 240 bits (613), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 146/458 (31%), Positives = 249/458 (54%), Gaps = 19/458 (4%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQ-TGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKV 59
++ N ++E + T+ ++ T ++FTFP ++KAC I GK VH +K+
Sbjct: 180 LVSGYVRNELYDEAIHTFLELISVTEFQPDNFTFPCLIKACTGKCDIHLGKSVHGMAVKM 239
Query: 60 GFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAIL 119
G D FV +I +Y KC + ++ D+MP ++++SWNS+I S EA
Sbjct: 240 GLIMDLFVGNAMIALYGKCGFLDEAVELFDKMPE--QNLISWNSLIRGFSENGFWLEAYR 297
Query: 120 VLKEMWVLGLEL--SASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMS 173
+ + G L +T V+++ CS G+ +H KLGL+ +E+ + N+++
Sbjct: 298 AFRSLLESGDGLIPDVATMVTLLPVCSGEGNVDVGMVIHGMAVKLGLV-HELMVCNALID 356
Query: 174 MYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDL-- 231
MY+K G ++EA +F +I S+VSW ++IG Y G V E F L +R+M + +L
Sbjct: 357 MYSKCGCLSEAAILFRKIENKSVVSWNSMIGAYSREGFVFETFDL---LRKMWMEEELME 413
Query: 232 ---VVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRV 288
V LNL+ C + L ++H L+ + ++ ++N ++ Y KCG L A V
Sbjct: 414 VNEVTILNLLPACLEESELLSLRALHGYSLRHSFQYKELINNAFIAAYAKCGSLVFAEHV 473
Query: 289 FDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSL 348
F + KSV W ++IGG+AQ G P +A++ + + + + P++ ++ + L AC LG L
Sbjct: 474 FFGMNTKSVSSWNAVIGGHAQNGDPIKALDFYFEMTRLGILPDDFSIVSLLLACGRLGLL 533
Query: 349 SKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGY 408
GKEI +++ NGLE N V SL+ ++ C + + FE + DK+ W+AM++GY
Sbjct: 534 QYGKEIHGFVLRNGLEMNSFVAVSLLSLYFHCSKPFYGRTYFETMGDKNSVCWNAMLSGY 593
Query: 409 AIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSH 446
+ + + ++AL+LF +M +GL+PD + SIL ACS
Sbjct: 594 SQNELPNEALSLFRQMLS-DGLEPDEIAIASILGACSQ 630
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 119/429 (27%), Positives = 222/429 (51%), Gaps = 14/429 (3%)
Query: 35 LVLKACANINSIWDGKRVHSHV-LKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPV 93
++L+ C ++ G+++ + + F D + T LI MYS C + SR V D +
Sbjct: 112 MLLQKCGQYKNVEIGRKLDEMLCVSSQFSGDFVLNTRLITMYSICGYPLESRLVFDRLLN 171
Query: 94 RLRSVVSWNSIISAHSRACLNDEAILVLKEMW-VLGLELSASTFVSVVSGCS----FRQG 148
+ ++ WN+++S + R L DEAI E+ V + TF ++ C+ G
Sbjct: 172 K--NLFQWNALVSGYVRNELYDEAIHTFLELISVTEFQPDNFTFPCLIKACTGKCDIHLG 229
Query: 149 ISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVN 208
S+H K+GL+ ++ + N+++++Y K G ++EA +FD++ E +++SW ++I G+
Sbjct: 230 KSVHGMAVKMGLI-MDLFVGNAMIALYGKCGFLDEAVELFDKMPEQNLISWNSLIRGFSE 288
Query: 209 VGNVNEAFGLCNQMRRM--SVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNED 266
G EA+ + + PD+ + L+ C+ GN+ + + +H + +K G +E
Sbjct: 289 NGFWLEAYRAFRSLLESGDGLIPDVATMVTLLPVCSGEGNVDVGMVIHGMAVKLGLVHEL 348
Query: 267 PLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKT 326
+ N L+ MY+KCG L A +F + KSV W SMIG Y++ G+ E +L +++
Sbjct: 349 MVCNALIDMYSKCGCLSEAAILFRKIENKSVVSWNSMIGAYSREGFVFETFDLLRKMWME 408
Query: 327 S--VRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRIN 384
+ NE T+ L AC E L + + Y + + + + + I ++KCG +
Sbjct: 409 EELMEVNEVTILNLLPACLEESELLSLRALHGYSLRHSFQYKELINNAFIAAYAKCGSLV 468
Query: 385 KAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSAC 444
A+ VF + K ++ W+A+I G+A +G +AL+ +++M + G+ PD S+L AC
Sbjct: 469 FAEHVFFGMNTKSVSSWNAVIGGHAQNGDPIKALDFYFEMTRL-GILPDDFSIVSLLLAC 527
Query: 445 SHSGMVDDG 453
G++ G
Sbjct: 528 GRLGLLQYG 536
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/251 (27%), Positives = 130/251 (51%), Gaps = 4/251 (1%)
Query: 237 LILGCAQVGNLFLALSMHSLL-LKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEK 295
L+ C Q N+ + + +L + S ++ + L+ L++MY+ CG +R VFD +L K
Sbjct: 113 LLQKCGQYKNVEIGRKLDEMLCVSSQFSGDFVLNTRLITMYSICGYPLESRLVFDRLLNK 172
Query: 296 SVFLWTSMIGGYAQLGYPSEAVNLFKRLLK-TSVRPNEATLATTLSACAELGSLSKGKEI 354
++F W +++ GY + EA++ F L+ T +P+ T + AC + GK +
Sbjct: 173 NLFQWNALVSGYVRNELYDEAIHTFLELISVTEFQPDNFTFPCLIKACTGKCDIHLGKSV 232
Query: 355 EEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMG 414
V GL + V ++I ++ KCG +++A E+F+++P+++L W+++I G++ +G
Sbjct: 233 HGMAVKMGLIMDLFVGNAMIALYGKCGFLDEAVELFDKMPEQNLISWNSLIRGFSENGFW 292
Query: 415 DQALNLFYK-MQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHY 473
+A F ++ +GL PD ++L CS G VD G+ M G+ +
Sbjct: 293 LEAYRAFRSLLESGDGLIPDVATMVTLLPVCSGEGNVDVGM-VIHGMAVKLGLVHELMVC 351
Query: 474 LCLVDLLGRAG 484
L+D+ + G
Sbjct: 352 NALIDMYSKCG 362
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 94/187 (50%), Gaps = 6/187 (3%)
Query: 316 AVNLFKRLLKTS----VRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQV-Q 370
A++ +R K + + + + L C + ++ G++++E + ++ S V
Sbjct: 87 ALDFLQRAWKNNAGYDLAQRKEAMGMLLQKCGQYKNVEIGRKLDEMLCVSSQFSGDFVLN 146
Query: 371 TSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGL 430
T LI M+S CG +++ VF+R+ +K+L W+A+++GY + + D+A++ F ++ V
Sbjct: 147 TRLITMYSICGYPLESRLVFDRLLNKNLFQWNALVSGYVRNELYDEAIHTFLELISVTEF 206
Query: 431 KPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLAL 490
+PD + ++ AC+ + G S M G+ + ++ L G+ G D A+
Sbjct: 207 QPDNFTFPCLIKACTGKCDIHLGKS-VHGMAVKMGLIMDLFVGNAMIALYGKCGFLDEAV 265
Query: 491 KTIHEMP 497
+ +MP
Sbjct: 266 ELFDKMP 272
>gi|147805537|emb|CAN74095.1| hypothetical protein VITISV_023708 [Vitis vinifera]
Length = 906
Score = 355 bits (910), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 197/608 (32%), Positives = 330/608 (54%), Gaps = 27/608 (4%)
Query: 13 ETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLI 72
E + + M+ +G+ N F+ ++ AC + GK +H +++K+G+ D F L+
Sbjct: 241 EAVGLFYEMVLSGIKPNEFSLSSMVNACTGLRDSSRGKIIHGYLIKLGYDWDPFSANALV 300
Query: 73 DMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELS 132
DMY+K D + V ++ ++ +VSWN++I+ VL E LEL
Sbjct: 301 DMYAKVGDLADAISVFEK--IKQPDIVSWNAVIAG-----------CVLHEHHEQALELL 347
Query: 133 ASTFVSVVSGCSFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIG 192
G RQ +H + K+ + +++ ++ ++ MY+K + +AR F+ +
Sbjct: 348 ---------GQMKRQ---LHSSLMKMDM-ESDLFVSVGLVDMYSKCDLLEDARMAFNLLP 394
Query: 193 ETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALS 252
E +++W II GY EA L +M + + + ++ A + + +
Sbjct: 395 EKDLIAWNAIISGYSQYWEDMEALSLFVEMHKEGIGFNQTTLSTILKSTAGLQVVHVCRQ 454
Query: 253 MHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGY 312
+H L +KSG++++ + N L+ Y KC +E A R+F+ + +TSMI YAQ G
Sbjct: 455 VHGLSVKSGFHSDIYVVNSLIDSYGKCSHVEDAERIFEECTIGDLVSFTSMITAYAQYGQ 514
Query: 313 PSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTS 372
EA+ LF + ++P+ ++ L+ACA L + +GK++ +I+ G + S
Sbjct: 515 GEEALKLFLEMQDMELKPDRFVCSSLLNACANLSAFEQGKQLHVHILKYGFVLDIFAGNS 574
Query: 373 LIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKP 432
L++M++KCG I+ A F + ++ + WSAMI G A HG G QAL LF +M EG+ P
Sbjct: 575 LVNMYAKCGSIDDAGRAFSELTERGIVSWSAMIGGLAQHGHGRQALQLFNQMLK-EGVSP 633
Query: 433 DAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKT 492
+ + S+L AC+H+G+V + +F+SM+ FG +P EHY C++DLLGRAG+ + A++
Sbjct: 634 NHITLVSVLGACNHAGLVTEAKLYFESMEELFGFKPMQEHYACMIDLLGRAGKINEAVEL 693
Query: 493 IHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMW 552
+++MP E A VW LL A H +VELG AA+ L L P +G ++L+AN++ SAG W
Sbjct: 694 VNKMPFEANASVWGALLGAARIHKDVELGRRAAEMLFILEPEKSGTHVLLANIYASAGKW 753
Query: 553 KEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKELHIKLLEA 612
+ A R LM D ++ KEPG S +E+ V F+ GDRSH+ S +I L EL + +A
Sbjct: 754 ENVAEVRRLMRDSKVKKEPGMSWIEVKDKVYTFLVGDRSHYRSQEIYAKLDELSDLMDKA 813
Query: 613 GYIAEADI 620
GY+ +I
Sbjct: 814 GYVPMVEI 821
Score = 235 bits (599), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 161/519 (31%), Positives = 263/519 (50%), Gaps = 37/519 (7%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+I NG L + M GV N FTF VLKAC+ + + GK+VH V+ G
Sbjct: 128 LISGYAQNGLGGGALMAFHEMHLLGVKCNEFTFSSVLKACSIVKDLRIGKQVHGVVVVSG 187
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F+ D FV L+ MY+KC +F+ S+++ DE+P R+VVSWN++ S + + EA+ +
Sbjct: 188 FEGDVFVANTLVVMYAKCDEFLDSKRLFDEIPE--RNVVSWNALFSCYVQXDFCGEAVGL 245
Query: 121 LKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
EM + G++ + + S+V+ C+ +G +H + KLG + AN+++ MYA
Sbjct: 246 FYEMVLSGIKPNEFSLSSMVNACTGLRDSSRGKIIHGYLIKLGYDWDPFS-ANALVDMYA 304
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K G + +A S+F++I + IVSW +I G V + +A L QM+R
Sbjct: 305 KVGDLADAISVFEKIKQPDIVSWNAVIAGCVLHEHHEQALELLGQMKR------------ 352
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
+HS L+K ++ + LV MY+KC LE AR F+ + EK
Sbjct: 353 ---------------QLHSSLMKMDMESDLFVSVGLVDMYSKCDLLEDARMAFNLLPEKD 397
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEE 356
+ W ++I GY+Q EA++LF + K + N+ TL+T L + A L + +++
Sbjct: 398 LIAWNAIISGYSQYWEDMEALSLFVEMHKEGIGFNQTTLSTILKSTAGLQVVHVCRQVHG 457
Query: 357 YIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQ 416
V +G S+ V SLI + KC + A+ +FE DL +++MI YA +G G++
Sbjct: 458 LSVKSGFHSDIYVVNSLIDSYGKCSHVEDAERIFEECTIGDLVSFTSMITAYAQYGQGEE 517
Query: 417 ALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCL 476
AL LF +MQ +E LKPD V +S+L+AC++ + G + +G I L
Sbjct: 518 ALKLFLEMQDME-LKPDRFVCSSLLNACANLSAFEQGKQLHVHIL-KYGFVLDIFAGNSL 575
Query: 477 VDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKH 515
V++ + G D A + E+ E W+ ++ +H
Sbjct: 576 VNMYAKCGSIDDAGRAFSEL-TERGIVSWSAMIGGLAQH 613
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 125/446 (28%), Positives = 218/446 (48%), Gaps = 50/446 (11%)
Query: 2 IRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGF 61
I N + G+F T +YS +L C S+ G ++H+H+ K G
Sbjct: 43 ILNLIDKGNFTPTSVSYSKLLSQ---------------CCTTKSLRPGLQIHAHITKSGL 87
Query: 62 QQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVL 121
D ++ LI++YSKC F +RK++DE +VSW+++IS +++ L A++
Sbjct: 88 SDDPSIRNHLINLYSKCRXFGYARKLVDESSE--PDLVSWSALISGYAQNGLGGGALMAF 145
Query: 122 KEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAK 177
EM +LG++ + TF SV+ CS R G +H V G ++ +AN+++ MYAK
Sbjct: 146 HEMHLLGVKCNEFTFSSVLKACSIVKDLRIGKQVHGVVVVSG-FEGDVFVANTLVVMYAK 204
Query: 178 FGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNL 237
+ +++ +FDEI E ++VSW + YV EA GL +M + P+ ++
Sbjct: 205 CDEFLDSKRLFDEIPERNVVSWNALFSCYVQXDFCGEAVGLFYEMVLSGIKPNEFSLSSM 264
Query: 238 ILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSV 297
+ C + + +H L+K GY+ + N LV MY K GDL A VF+ + + +
Sbjct: 265 VNACTGLRDSSRGKIIHGYLIKLGYDWDPFSANALVDMYAKVGDLADAISVFEKIKQPDI 324
Query: 298 FLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEY 357
W ++I G + +A+ L LG + +++
Sbjct: 325 VSWNAVIAGCVLHEHHEQALEL-------------------------LGQMK--RQLHSS 357
Query: 358 IVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQA 417
++ +ES+ V L+ M+SKC + A+ F +P+KDL W+A+I+GY+ + +A
Sbjct: 358 LMKMDMESDLFVSVGLVDMYSKCDLLEDARMAFNLLPEKDLIAWNAIISGYSQYWEDMEA 417
Query: 418 LNLFYKMQHVEGLKPDAVVYTSILSA 443
L+LF +M H EG+ + ++IL +
Sbjct: 418 LSLFVEM-HKEGIGFNQTTLSTILKS 442
Score = 128 bits (322), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 78/304 (25%), Positives = 154/304 (50%), Gaps = 5/304 (1%)
Query: 217 GLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMY 276
+ N + + + TP V + L+ C +L L +H+ + KSG +++ + N L+++Y
Sbjct: 42 AILNLIDKGNFTPTSVSYSKLLSQCCTTKSLRPGLQIHAHITKSGLSDDPSIRNHLINLY 101
Query: 277 TKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLA 336
+KC AR++ D E + W+++I GYAQ G A+ F + V+ NE T +
Sbjct: 102 SKCRXFGYARKLVDESSEPDLVSWSALISGYAQNGLGGGALMAFHEMHLLGVKCNEFTFS 161
Query: 337 TTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDK 396
+ L AC+ + L GK++ +V++G E + V +L+ M++KC +K +F+ +P++
Sbjct: 162 SVLKACSIVKDLRIGKQVHGVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFDEIPER 221
Query: 397 DLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGL-S 455
++ W+A+ + Y +A+ LFY+M + G+KP+ +S+++AC +G+ D
Sbjct: 222 NVVSWNALFSCYVQXDFCGEAVGLFYEMV-LSGIKPNEFSLSSMVNAC--TGLRDSSRGK 278
Query: 456 FFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKH 515
G + LVD+ + G A+ ++ E + W +++ C+ H
Sbjct: 279 IIHGYLIKLGYDWDPFSANALVDMYAKVGDLADAI-SVFEKIKQPDIVSWNAVIAGCVLH 337
Query: 516 HNVE 519
+ E
Sbjct: 338 EHHE 341
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 100/211 (47%), Gaps = 9/211 (4%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI G EE L + M + + F +L ACAN+++ GK++H H+LK G
Sbjct: 505 MITAYAQYGQGEEALKLFLEMQDMELKPDRFVCSSLLNACANLSAFEQGKQLHVHILKYG 564
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F D F L++MY+KC + + E+ R +VSW+++I ++ +A+ +
Sbjct: 565 FVLDIFAGNSLVNMYAKCGSIDDAGRAFSELTE--RGIVSWSAMIGGLAQHGHGRQALQL 622
Query: 121 LKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVY--KLGLLNNEIPLAN---SVMSMY 175
+M G+ + T VSV+ C+ G+ +Y + L P+ ++ +
Sbjct: 623 FNQMLKEGVSPNHITLVSVLGACN-HAGLVTEAKLYFESMEELFGFKPMQEHYACMIDLL 681
Query: 176 AKFGKVNEARSIFDEIG-ETSIVSWTTIIGG 205
+ GK+NEA + +++ E + W ++G
Sbjct: 682 GRAGKINEAVELVNKMPFEANASVWGALLGA 712
>gi|449446125|ref|XP_004140822.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 809
Score = 355 bits (910), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 207/652 (31%), Positives = 336/652 (51%), Gaps = 70/652 (10%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MIR S + Y SML + +++T+PL+++AC+ S W+ K+VH+HVLK+G
Sbjct: 49 MIRAYIQTNSPHFAFTLYKSMLSNYLGADNYTYPLLIQACSIRRSEWEAKQVHNHVLKLG 108
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F D +V+ LI+ +S CS+ + +V +E V VSWNSI++ + +EA +
Sbjct: 109 FDSDVYVRNTLINCFSVCSNMTDACRVFNESSVL--DSVSWNSILAGYIEIGNVEEAKHI 166
Query: 121 LKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGK 180
+M I +NS++ ++ G
Sbjct: 167 YHQM------------------------------------PERSIIASNSMIVLFGMRGL 190
Query: 181 VNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILG 240
V EA +FDE+ E +V+W+ +I + EA M ++ V D VV ++ +
Sbjct: 191 VVEACKLFDEMLEKDMVTWSALIACFQQNEMYEEAIRTFVGMHKIGVMVDEVVAVSALSA 250
Query: 241 CAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARR------------- 287
CA + + + +HSL LK G + L N L+ MY+KCGD+ +AR+
Sbjct: 251 CANLLVVNMGKLIHSLSLKIGTESYINLQNALIYMYSKCGDIMVARKLFDEAYLLDLISW 310
Query: 288 ------------------VFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVR 329
+FD++ EK V W+SMI GYAQ E + LF+ + + +
Sbjct: 311 NSMISGYLKCNLVDNAKAIFDSMPEKDVVSWSSMISGYAQNDLFDETLALFQEMQMSGFK 370
Query: 330 PNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEV 389
P+E TL + +SACA L +L +GK + YI NGL N + T+LI M+ KCG + A EV
Sbjct: 371 PDETTLVSVISACARLAALEQGKWVHAYIKRNGLTINVILGTTLIDMYMKCGCVETALEV 430
Query: 390 FERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGM 449
F + +K ++ W+A+I G A++G+ + +L++F M+ + P+ + + +L AC H G+
Sbjct: 431 FYGMIEKGISTWNALILGLAMNGLVESSLDMFSNMKKCH-VTPNEITFMGVLGACRHMGL 489
Query: 450 VDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLL 509
VD+G F SM + I+P+++HY C+VDLLGRAG+ A + ++ MP+ W LL
Sbjct: 490 VDEGQHHFYSMIHDHKIQPNVKHYGCMVDLLGRAGKLQEAEELLNRMPMTPDVATWGALL 549
Query: 510 SACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTK 569
AC KH + E+G + L+ L P G ++L++N++ S G W + RG+M R+ K
Sbjct: 550 GACKKHGDSEMGRRVGRKLIELQPDHDGFHVLLSNIYASKGKWDDVLEIRGMMTKHRVLK 609
Query: 570 EPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKELHIKLLEAGYIAEADIV 621
PG S +E +G + F+AGD++H I L E+ +KL GY + + V
Sbjct: 610 IPGCSMIEANGVIHEFLAGDKTHPDMDAIEDMLVEMAMKLKLEGYTPDINEV 661
Score = 119 bits (297), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 103/430 (23%), Positives = 179/430 (41%), Gaps = 96/430 (22%)
Query: 173 SMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLV 232
S + F ++ R IF+ I T+ W +I Y+ + + AF L M + D
Sbjct: 20 STHFPFIHIDYTRRIFNFIENTNCFMWNMMIRAYIQTNSPHFAFTLYKSMLSNYLGADNY 79
Query: 233 VFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKC------------- 279
+ LI C+ + + A +H+ +LK G++++ + N L++ ++ C
Sbjct: 80 TYPLLIQACSIRRSEWEAKQVHNHVLKLGFDSDVYVRNTLINCFSVCSNMTDACRVFNES 139
Query: 280 ------------------GDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFK 321
G++E A+ ++ + E+S+ SMI + G EA LF
Sbjct: 140 SVLDSVSWNSILAGYIEIGNVEEAKHIYHQMPERSIIASNSMIVLFGMRGLVVEACKLFD 199
Query: 322 RLL-------------------------------KTSVRPNEATLATTLSACAELGSLSK 350
+L K V +E + LSACA L ++
Sbjct: 200 EMLEKDMVTWSALIACFQQNEMYEEAIRTFVGMHKIGVMVDEVVAVSALSACANLLVVNM 259
Query: 351 GKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRI--------------------------- 383
GK I + G ES +Q +LI+M+SKCG I
Sbjct: 260 GKLIHSLSLKIGTESYINLQNALIYMYSKCGDIMVARKLFDEAYLLDLISWNSMISGYLK 319
Query: 384 ----NKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTS 439
+ AK +F+ +P+KD+ WS+MI+GYA + + D+ L LF +MQ + G KPD S
Sbjct: 320 CNLVDNAKAIFDSMPEKDVVSWSSMISGYAQNDLFDETLALFQEMQ-MSGFKPDETTLVS 378
Query: 440 ILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVE 499
++SAC+ ++ G ++ N G+ ++ L+D+ + G + AL+ + M +E
Sbjct: 379 VISACARLAALEQGKWVHAYIKRN-GLTINVILGTTLIDMYMKCGCVETALEVFYGM-IE 436
Query: 500 VQAQVWAPLL 509
W L+
Sbjct: 437 KGISTWNALI 446
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 70/302 (23%), Positives = 136/302 (45%), Gaps = 23/302 (7%)
Query: 282 LELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSA 341
++ RR+F+ + + F+W MI Y Q P A L+K +L + + T + A
Sbjct: 28 IDYTRRIFNFIENTNCFMWNMMIRAYIQTNSPHFAFTLYKSMLSNYLGADNYTYPLLIQA 87
Query: 342 CAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVW 401
C+ S + K++ +++ G +S+ V+ +LI+ FS C + A VF D W
Sbjct: 88 CSIRRSEWEAKQVHNHVLKLGFDSDVYVRNTLINCFSVCSNMTDACRVFNESSVLDSVSW 147
Query: 402 SAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQ 461
++++ GY G ++A +++++M + + S++ G+V + F M
Sbjct: 148 NSILAGYIEIGNVEEAKHIYHQMP-----ERSIIASNSMIVLFGMRGLVVEACKLFDEM- 201
Query: 462 SNFGIEPSIEHYLCLVDLLGRAGRFDLALKT---IHEMPVEVQAQVWAPLLSACMKHHNV 518
+E + + L+ + ++ A++T +H++ V V V LSAC V
Sbjct: 202 ----LEKDMVTWSALIACFQQNEMYEEAIRTFVGMHKIGVMVDEVVAVSALSACANLLVV 257
Query: 519 ELGEYAAKNLLTLNPGSTGNYILMAN----LFTSAGMWKEAATARGLMDDRRLTKEPGWS 574
+G+ L+L G T +YI + N +++ G + AR L D+ L W+
Sbjct: 258 NMGKLIHS--LSLKIG-TESYINLQNALIYMYSKCG---DIMVARKLFDEAYLLDLISWN 311
Query: 575 QV 576
+
Sbjct: 312 SM 313
>gi|449455158|ref|XP_004145320.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
gi|449470513|ref|XP_004152961.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
gi|449523079|ref|XP_004168552.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
Length = 733
Score = 354 bits (909), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 205/604 (33%), Positives = 330/604 (54%), Gaps = 43/604 (7%)
Query: 50 KRVHSHVLKVGFQQDAFVQTGLI--DMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISA 107
K VH+ +L+ G D F + L S S +R + D++P ++ +WN++I A
Sbjct: 42 KEVHARMLRTGLFFDPFSASKLFTASALSSFSTLDYARNLFDQIPQP--NLYTWNTLIRA 99
Query: 108 HSRACLNDEAILVLKEMWVLGLELSAS-TFVSVVSGCS----FRQGISMHCCVYKLGLLN 162
++ + ++ ++ ++ +L TF V+ S R G ++H KL
Sbjct: 100 YASSSDPFQSFVIFLDLLDKCEDLPNKFTFPFVIKAASELKASRVGTAVHGMAIKLSF-G 158
Query: 163 NEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQM 222
++ + NS++ Y G ++ A +F I +VSW ++I + +A L +M
Sbjct: 159 MDLYILNSLVRFYGACGDLSMAERLFKGISCKDVVSWNSMISAFAQGNCPEDALELFLKM 218
Query: 223 RRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDL 282
R +V P+ V + ++ CA+ +L + S + + G + L N ++ MYTKCG +
Sbjct: 219 ERENVMPNSVTMVGVLSACAKKLDLEFGRWVCSYIERKGIKVDLTLCNAMLDMYTKCGSV 278
Query: 283 ELARRVFDAVLEKSVFLWTSMIGGYAQLG------------------------------- 311
+ A+++FD + E+ VF WT M+ GYA++G
Sbjct: 279 DDAQKLFDEMPERDVFSWTIMLDGYAKMGDYDAARLVFNAMPVKEIAAWNVLISAYEQNG 338
Query: 312 YPSEAVNLFKRL-LKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQ 370
P EA+ +F L L +P+E TL +TLSACA+LG++ G I YI G+ N +
Sbjct: 339 KPKEALAIFNELQLSKIAKPDEVTLVSTLSACAQLGAIDLGGWIHVYIKREGIVLNCHLI 398
Query: 371 TSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGL 430
+SL+ M++KCG + KA EVF V ++D+ VWSAMI G +HG G A++LF++MQ + +
Sbjct: 399 SSLVDMYAKCGSLEKALEVFYSVEERDVYVWSAMIAGLGMHGRGKAAIDLFFEMQEAK-V 457
Query: 431 KPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLAL 490
KP++V +T++L ACSH+G+VD+G FF M+ +G+ P ++HY C+VD+LGRAG + A+
Sbjct: 458 KPNSVTFTNVLCACSHAGLVDEGRVFFHEMEPVYGVVPEMKHYACMVDILGRAGFLEEAM 517
Query: 491 KTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSAG 550
+ I+EM A VW LL AC H NVELGE A+ LL L P + G +L++N++ G
Sbjct: 518 ELINEMSTTPSASVWGALLGACSLHMNVELGELASDQLLKLEPRNHGAIVLLSNIYAKTG 577
Query: 551 MWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKELHIKLL 610
W++ + R LM D L KEPG S +E +G+V F+ GD +H LS +I L+E+ KL
Sbjct: 578 RWEKVSELRKLMRDTELKKEPGCSSIEANGNVHEFLVGDNTHPLSSNIYSKLEEIATKLK 637
Query: 611 EAGY 614
GY
Sbjct: 638 SVGY 641
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 109/420 (25%), Positives = 200/420 (47%), Gaps = 39/420 (9%)
Query: 29 NSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVL 88
N FTFP V+KA + + + G VH +K+ F D ++ L+ Y C D + ++
Sbjct: 125 NKFTFPFVIKAASELKASRVGTAVHGMAIKLSFGMDLYILNSLVRFYGACGDLSMAERLF 184
Query: 89 DEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCSFRQG 148
+ + VVSWNS+ISA ++ ++A+ + +M + ++ T V V+S C+ +
Sbjct: 185 K--GISCKDVVSWNSMISAFAQGNCPEDALELFLKMERENVMPNSVTMVGVLSACAKKLD 242
Query: 149 ISMH---CCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGG 205
+ C + + ++ L N+++ MY K G V++A+ +FDE+ E + SWT ++ G
Sbjct: 243 LEFGRWVCSYIERKGIKVDLTLCNAMLDMYTKCGSVDDAQKLFDEMPERDVFSWTIMLDG 302
Query: 206 YVNVGNVN-------------------------------EAFGLCNQMRRMSVT-PDLVV 233
Y +G+ + EA + N+++ + PD V
Sbjct: 303 YAKMGDYDAARLVFNAMPVKEIAAWNVLISAYEQNGKPKEALAIFNELQLSKIAKPDEVT 362
Query: 234 FLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVL 293
++ + CAQ+G + L +H + + G L + LV MY KCG LE A VF +V
Sbjct: 363 LVSTLSACAQLGAIDLGGWIHVYIKREGIVLNCHLISSLVDMYAKCGSLEKALEVFYSVE 422
Query: 294 EKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKE 353
E+ V++W++MI G G A++LF + + V+PN T L AC+ G + +G+
Sbjct: 423 ERDVYVWSAMIAGLGMHGRGKAAIDLFFEMQEAKVKPNSVTFTNVLCACSHAGLVDEGRV 482
Query: 354 -IEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVF-ERVPDKDLAVWSAMINGYAIH 411
E + G+ + ++ + + G + +A E+ E +VW A++ ++H
Sbjct: 483 FFHEMEPVYGVVPEMKHYACMVDILGRAGFLEEAMELINEMSTTPSASVWGALLGACSLH 542
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 106/415 (25%), Positives = 202/415 (48%), Gaps = 40/415 (9%)
Query: 137 VSVVSGCSF-RQGISMHCCVYKLGLLNNEIPLANSVM---SMYAKFGKVNEARSIFDEIG 192
+S + CS +Q +H + + GL + P + S + S + F ++ AR++FD+I
Sbjct: 29 LSTIDKCSSSKQLKEVHARMLRTGLFFD--PFSASKLFTASALSSFSTLDYARNLFDQIP 86
Query: 193 ETSIVSWTTIIGGYVNVGNVNEAFGL-CNQMRRMSVTPDLVVFLNLILGCAQVGNLFLAL 251
+ ++ +W T+I Y + + ++F + + + + P+ F +I +++ +
Sbjct: 87 QPNLYTWNTLIRAYASSSDPFQSFVIFLDLLDKCEDLPNKFTFPFVIKAASELKASRVGT 146
Query: 252 SMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLG 311
++H + +K + + + N LV Y CGDL +A R+F + K V W SMI +AQ
Sbjct: 147 AVHGMAIKLSFGMDLYILNSLVRFYGACGDLSMAERLFKGISCKDVVSWNSMISAFAQGN 206
Query: 312 YPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQT 371
P +A+ LF ++ + +V PN T+ LSACA+ L G+ + YI G++ + +
Sbjct: 207 CPEDALELFLKMERENVMPNSVTMVGVLSACAKKLDLEFGRWVCSYIERKGIKVDLTLCN 266
Query: 372 SLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGD---------------- 415
+++ M++KCG ++ A+++F+ +P++D+ W+ M++GYA G D
Sbjct: 267 AMLDMYTKCGSVDDAQKLFDEMPERDVFSWTIMLDGYAKMGDYDAARLVFNAMPVKEIAA 326
Query: 416 ---------------QALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSM 460
+AL +F ++Q + KPD V S LSAC+ G +D G +
Sbjct: 327 WNVLISAYEQNGKPKEALAIFNELQLSKIAKPDEVTLVSTLSACAQLGAIDLG-GWIHVY 385
Query: 461 QSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKH 515
GI + LVD+ + G + AL+ + + E VW+ +++ H
Sbjct: 386 IKREGIVLNCHLISSLVDMYAKCGSLEKALEVFYSVE-ERDVYVWSAMIAGLGMH 439
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 99/440 (22%), Positives = 178/440 (40%), Gaps = 85/440 (19%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI E+ L + M + V NS T VL ACA + G+ V S++ + G
Sbjct: 198 MISAFAQGNCPEDALELFLKMERENVMPNSVTMVGVLSACAKKLDLEFGRWVCSYIERKG 257
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVR-------------------------- 94
+ D + ++DMY+KC ++K+ DEMP R
Sbjct: 258 IKVDLTLCNAMLDMYTKCGSVDDAQKLFDEMPERDVFSWTIMLDGYAKMGDYDAARLVFN 317
Query: 95 ---LRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGL-ELSASTFVSVVSGCSFRQGIS 150
++ + +WN +ISA+ + EA+ + E+ + + + T VS +S C+ I
Sbjct: 318 AMPVKEIAAWNVLISAYEQNGKPKEALAIFNELQLSKIAKPDEVTLVSTLSACAQLGAID 377
Query: 151 M----HCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGY 206
+ H + + G++ N L +S++ MYAK G + +A +F + E + W+ +I G
Sbjct: 378 LGGWIHVYIKREGIVLN-CHLISSLVDMYAKCGSLEKALEVFYSVEERDVYVWSAMIAGL 436
Query: 207 VNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSG---YN 263
G A L +M+ V P+ V F N++ C+ G L+ G ++
Sbjct: 437 GMHGRGKAAIDLFFEMQEAKVKPNSVTFTNVLCACSHAG-----------LVDEGRVFFH 485
Query: 264 NEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRL 323
+P+ ++ M + M+ + G+ EA+ L +
Sbjct: 486 EMEPVYGVVPEMKH----------------------YACMVDILGRAGFLEEAMELINEM 523
Query: 324 LKTSVRPNEATLATTLSACA-----ELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFS 378
S P+ + L AC+ ELG L+ + +L N L ++++
Sbjct: 524 ---STTPSASVWGALLGACSLHMNVELGELASDQ------LLKLEPRNHGAIVLLSNIYA 574
Query: 379 KCGRINKAKEVFERVPDKDL 398
K GR K E+ + + D +L
Sbjct: 575 KTGRWEKVSELRKLMRDTEL 594
>gi|449465795|ref|XP_004150613.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g14730-like [Cucumis sativus]
Length = 603
Score = 354 bits (909), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 193/590 (32%), Positives = 323/590 (54%), Gaps = 19/590 (3%)
Query: 37 LKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLR 96
L++CA+ ++ GK++HS ++ GF T LI+MYSKC + V + P R
Sbjct: 18 LQSCADHQNLNKGKQLHSLMITYGFSPSPPSITSLINMYSKCGQMGEAILVFYD-PCHER 76
Query: 97 SVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVV-SGCSFRQGISMHCCV 155
+V ++N+IIS L + K+M + G+ TF VV + C + +H C+
Sbjct: 77 NVFAYNAIISGFVSNGLASKGFQFYKKMRLEGVMPDKYTFPCVVRTCCEVMEVKKIHGCL 136
Query: 156 YKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEA 215
K+GL ++ + +++++ Y K G + +A+ +F E+ +V W +I GY +G ++EA
Sbjct: 137 LKMGL-ELDVFVGSALVNTYLKNGSMEDAQKVFGELSIRDVVLWNAMINGYAKIGCLDEA 195
Query: 216 FGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSM 275
+ +M V P ++ A G+L ++H +++K GY++ + N L+ M
Sbjct: 196 LEVFRRMHVKGVAPSRFTITGILSVFASRGDLDNGKTVHGIVMKMGYDSGVSVSNALIDM 255
Query: 276 YTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATL 335
Y KC + A +F+ + EK +F W S+I + Q G + LF ++L + + P+ T+
Sbjct: 256 YGKCKHIGDALIIFEMINEKDIFSWNSIISVHEQCGDHDGTLRLFDKMLGSGILPDLVTI 315
Query: 336 ATTLSACAELGSLSKGKEIEEYIVLNGLESNRQ--------VQTSLIHMFSKCGRINKAK 387
T L AC+ L +L G+EI Y+++NGL + + V +++ M++KCG +N A
Sbjct: 316 TTVLPACSHLAALMHGREIHGYMIINGLGKDDENGAVDNLLVSNAVMDMYAKCGSMNNAL 375
Query: 388 EVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHS 447
++F+ + KD+A W+ MI GY +HG +AL +F +M E KP+ V +LSAC+H+
Sbjct: 376 KIFDSMSKKDVASWNIMIMGYGMHGYALEALGMFSQMCEAE-FKPNEVTLVGVLSACNHA 434
Query: 448 GMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAP 507
G V G F M+S FG+ P+IEHY C++D+LGRAG + A + + +MP++ VW
Sbjct: 435 GFVSHGRLFLAQMESTFGVIPTIEHYTCVIDMLGRAGHLEDAYEIVQKMPIQANPVVWRA 494
Query: 508 LLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRL 567
LL AC H N EL E AA+ +L L P G+Y+LM+N++ G ++E R M ++ +
Sbjct: 495 LLGACRLHGNAELAEIAARQVLQLEPEHCGSYVLMSNVYGVIGRYEEVLEVRKTMKEQNV 554
Query: 568 TKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKELHIKLLEAGYIAE 617
K PG S +E+ V VF GDR+H L L +L + G+I +
Sbjct: 555 KKTPGCSWIELKDGVHVFRTGDRTH-------SELNALTNQLCDIGFILD 597
Score = 204 bits (518), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 129/436 (29%), Positives = 221/436 (50%), Gaps = 30/436 (6%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+I +NG + Y M GV + +TFP V++ C + + K++H +LK+G
Sbjct: 84 IISGFVSNGLASKGFQFYKKMRLEGVMPDKYTFPCVVRTCCEVMEV---KKIHGCLLKMG 140
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+ D FV + L++ Y K ++KV E+ + R VV WN++I+ +++ DEA+ V
Sbjct: 141 LELDVFVGSALVNTYLKNGSMEDAQKVFGELSI--RDVVLWNAMINGYAKIGCLDEALEV 198
Query: 121 LKEMWVLGLELSASTFVSVVSGCSFR----QGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
+ M V G+ S T ++S + R G ++H V K+G ++ + ++N+++ MY
Sbjct: 199 FRRMHVKGVAPSRFTITGILSVFASRGDLDNGKTVHGIVMKMG-YDSGVSVSNALIDMYG 257
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K + +A IF+ I E I SW +II + G+ + L ++M + PDLV
Sbjct: 258 KCKHIGDALIIFEMINEKDIFSWNSIISVHEQCGDHDGTLRLFDKMLGSGILPDLVTITT 317
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNED---PLDNLLVS-----MYTKCGDLELARRV 288
++ C+ + L +H ++ +G +D +DNLLVS MY KCG + A ++
Sbjct: 318 VLPACSHLAALMHGREIHGYMIINGLGKDDENGAVDNLLVSNAVMDMYAKCGSMNNALKI 377
Query: 289 FDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSL 348
FD++ +K V W MI GY GY EA+ +F ++ + +PNE TL LSAC G +
Sbjct: 378 FDSMSKKDVASWNIMIMGYGMHGYALEALGMFSQMCEAEFKPNEVTLVGVLSACNHAGFV 437
Query: 349 SKGKEIEEYIVLNGLESNRQV------QTSLIHMFSKCGRINKAKEVFERVP-DKDLAVW 401
S G+ + L +ES V T +I M + G + A E+ +++P + VW
Sbjct: 438 SHGR-----LFLAQMESTFGVIPTIEHYTCVIDMLGRAGHLEDAYEIVQKMPIQANPVVW 492
Query: 402 SAMINGYAIHGMGDQA 417
A++ +HG + A
Sbjct: 493 RALLGACRLHGNAELA 508
>gi|224140095|ref|XP_002323422.1| predicted protein [Populus trichocarpa]
gi|222868052|gb|EEF05183.1| predicted protein [Populus trichocarpa]
Length = 574
Score = 354 bits (909), Expect = 7e-95, Method: Compositional matrix adjust.
Identities = 181/487 (37%), Positives = 293/487 (60%), Gaps = 3/487 (0%)
Query: 136 FVSVVSGC-SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGET 194
F+S + C + Q +H V G++++ I +AN ++ M AK + A +F+++ E
Sbjct: 6 FISTLFKCRNIFQIKQVHAQVTTTGIIHDLI-VANKLLYMCAKHKDLVTAHLLFNKMEER 64
Query: 195 SIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMH 254
VSW+ +IGG+V G+ F ++ R PD +I C L + +H
Sbjct: 65 DPVSWSVMIGGFVKNGDYERCFQTFRELIRAGSKPDNFSLPFVIKACRDTMGLIMGRLIH 124
Query: 255 SLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPS 314
S +LK+G + ++ + + LV MY KCG ++ A+++FD + +K + T MI GYA+ G P+
Sbjct: 125 STVLKNGLHLDNFVCSTLVDMYAKCGMIDNAKQLFDRMPKKDLVTRTVMIAGYAECGKPN 184
Query: 315 EAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLI 374
E+ LF ++ + P++ + T ++ACA+LG+++K + + +Y+ + ++ T++I
Sbjct: 185 ESWVLFDQMRRDGFVPDKVAMVTIVNACAKLGAMNKARLVHDYVCARRYSLDVELGTAMI 244
Query: 375 HMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDA 434
M++KCG I+ ++E+F+R+ K++ WSAMI Y HG G +AL LF+ M + G+ P+
Sbjct: 245 DMYAKCGSIDSSREIFDRMEQKNVISWSAMIGAYGYHGQGREALELFHMMLN-SGIIPNR 303
Query: 435 VVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIH 494
+ + S+L ACSH+G+VDDGL F M ++G+ P ++HY C+VDLLGRAGR D AL+ I
Sbjct: 304 ITFISLLYACSHAGLVDDGLQLFSLMSVSYGVRPDVKHYTCMVDLLGRAGRLDQALRLIE 363
Query: 495 EMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKE 554
M VE +W L AC H V+L E AAK LL+L + G+YIL++N++ +AG WK+
Sbjct: 364 NMEVEKDEGIWCAFLGACRIHRQVDLAEKAAKLLLSLQTQNPGHYILLSNIYANAGRWKD 423
Query: 555 AATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKELHIKLLEAGY 614
A R LM RRL K PG++ +E+D + F AGD SH S +I + LK L KL AGY
Sbjct: 424 VAKIRNLMAKRRLKKIPGYTWIEVDNIIYRFGAGDNSHLRSNEIYEMLKSLSQKLESAGY 483
Query: 615 IAEADIV 621
+ + + V
Sbjct: 484 VPDTNSV 490
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 80/314 (25%), Positives = 160/314 (50%), Gaps = 13/314 (4%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI NG +E T+ +++ G ++F+ P V+KAC + + G+ +HS VLK G
Sbjct: 72 MIGGFVKNGDYERCFQTFRELIRAGSKPDNFSLPFVIKACRDTMGLIMGRLIHSTVLKNG 131
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
D FV + L+DMY+KC +++++ D MP + +V+ +I+ ++ +E+ ++
Sbjct: 132 LHLDNFVCSTLVDMYAKCGMIDNAKQLFDRMPK--KDLVTRTVMIAGYAECGKPNESWVL 189
Query: 121 LKEMWVLGLELSASTFVSVVSGCSFRQGISM------HCCVYKLGLLNNEIPLANSVMSM 174
+M G V++V+ C+ ++ + C + L ++ L +++ M
Sbjct: 190 FDQMRRDGFVPDKVAMVTIVNACAKLGAMNKARLVHDYVCARRYSL---DVELGTAMIDM 246
Query: 175 YAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVF 234
YAK G ++ +R IFD + + +++SW+ +IG Y G EA L + M + P+ + F
Sbjct: 247 YAKCGSIDSSREIFDRMEQKNVISWSAMIGAYGYHGQGREALELFHMMLNSGIIPNRITF 306
Query: 235 LNLILGCAQVGNLFLALSMHSLL-LKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAV- 292
++L+ C+ G + L + SL+ + G + +V + + G L+ A R+ + +
Sbjct: 307 ISLLYACSHAGLVDDGLQLFSLMSVSYGVRPDVKHYTCMVDLLGRAGRLDQALRLIENME 366
Query: 293 LEKSVFLWTSMIGG 306
+EK +W + +G
Sbjct: 367 VEKDEGIWCAFLGA 380
>gi|357437223|ref|XP_003588887.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355477935|gb|AES59138.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 697
Score = 354 bits (909), Expect = 7e-95, Method: Compositional matrix adjust.
Identities = 196/594 (32%), Positives = 324/594 (54%), Gaps = 10/594 (1%)
Query: 6 TNNGSFEETLSTYSS-MLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQD 64
T N ++E L + M + +S+T+P VLKAC + + G+ +H+ ++K G D
Sbjct: 81 TRNCMYDEALGLFDKLMCYPCLKPDSYTYPSVLKACGGLRRVVLGQMIHTCLVKEGLMVD 140
Query: 65 AFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEM 124
V + L+ MY+KC++F + K+ DEMP + V WN++IS + ++ +EA+ M
Sbjct: 141 IVVGSSLVGMYAKCNEFECAVKLFDEMPDK--DVACWNTVISCYYQSGKFEEALRYFGMM 198
Query: 125 WVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGK 180
G E + T + +S C+ +G +H + G + ++ +++ MY K G+
Sbjct: 199 RRFGFEPDSVTITTAISSCARLLDLDRGREIHKELVNSGFRMDSF-VSAALVDMYGKCGQ 257
Query: 181 VNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILG 240
+ A +F+++ ++V+W ++I GY G+ L +M V P L + ++
Sbjct: 258 LEMAIEVFEQMPNKTVVAWNSMINGYGFKGDGISCIQLFKRMYSEGVKPTLTTLTSTLMA 317
Query: 241 CAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLW 300
C+Q L +H ++++ + L++ L+ +Y KCG +E A +F + + + W
Sbjct: 318 CSQSAQLLEGKFVHGYIIRNRIQPDIFLNSSLMDLYFKCGKVESAETIFKLMPKTTTVSW 377
Query: 301 TSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVL 360
MI GY G +A+ LF + K+ V P+ T + L+AC++L +L KG+EI IV
Sbjct: 378 NVMISGYVTEGKLFDALRLFGEMSKSFVEPDAITFTSVLAACSQLAALEKGREIHNLIVE 437
Query: 361 NGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNL 420
L +N V +L+ M++KCG + +A VF+ +P++DL W++MI Y HG +AL L
Sbjct: 438 RNLGNNEVVMGALLDMYAKCGAVEEAFGVFKCLPERDLVSWTSMITAYGSHGRVYEALEL 497
Query: 421 FYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLL 480
F +M +KPD V + +ILSACSH+G+VDDGL F M + +GI P IEHY CL+ LL
Sbjct: 498 FAEMLQ-SNVKPDRVTFLAILSACSHAGLVDDGLYHFNQMINVYGIIPRIEHYSCLITLL 556
Query: 481 GRAGRFDLALKTIHEMP-VEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNY 539
GRAGR A + + P + Q+ + L SAC H N++LG A+NL+ +P + Y
Sbjct: 557 GRAGRLHEAYEILQSNPEISDDFQLLSTLFSACRLHKNLDLGVEIAENLIDKDPDDSSTY 616
Query: 540 ILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHH 593
I+++N++ S G W E R M D L K PG S +EI+ + F D SH+
Sbjct: 617 IILSNMYASFGKWDEVRMVRSKMKDLGLKKNPGCSWIEINEKIVPFFVEDNSHY 670
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/249 (31%), Positives = 123/249 (49%), Gaps = 7/249 (2%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI G + + M GV T L AC+ + +GK VH ++++
Sbjct: 279 MINGYGFKGDGISCIQLFKRMYSEGVKPTLTTLTSTLMACSQSAQLLEGKFVHGYIIRNR 338
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
Q D F+ + L+D+Y KC S+ + MP + VSWN +IS + +A+ +
Sbjct: 339 IQPDIFLNSSLMDLYFKCGKVESAETIFKLMPK--TTTVSWNVMISGYVTEGKLFDALRL 396
Query: 121 LKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
EM +E A TF SV++ CS +G +H + + L NNE+ + +++ MYA
Sbjct: 397 FGEMSKSFVEPDAITFTSVLAACSQLAALEKGREIHNLIVERNLGNNEVVMG-ALLDMYA 455
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K G V EA +F + E +VSWT++I Y + G V EA L +M + +V PD V FL
Sbjct: 456 KCGAVEEAFGVFKCLPERDLVSWTSMITAYGSHGRVYEALELFAEMLQSNVKPDRVTFLA 515
Query: 237 LILGCAQVG 245
++ C+ G
Sbjct: 516 ILSACSHAG 524
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 89/189 (47%), Gaps = 25/189 (13%)
Query: 335 LATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVP 394
L L A SL +GK + + +V GL+++ V +LI ++ C + AK VF+ +
Sbjct: 6 LIPLLRASVNSKSLKQGKVLHQKVVTLGLQNDVYVCKNLISLYVSCNLFDYAKNVFDVIE 65
Query: 395 DK-DLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACS-------- 445
+ ++++ + ++ GY + M D+AL LF K+ LKPD+ Y S+L AC
Sbjct: 66 NPFEISLCNGLMAGYTRNCMYDEALGLFDKLMCYPCLKPDSYTYPSVLKACGGLRRVVLG 125
Query: 446 ---HSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQA 502
H+ +V +GL + S+ LV + + F+ A+K EMP +
Sbjct: 126 QMIHTCLVKEGLMVDIVVGSS------------LVGMYAKCNEFECAVKLFDEMP-DKDV 172
Query: 503 QVWAPLLSA 511
W ++S
Sbjct: 173 ACWNTVISC 181
>gi|449477503|ref|XP_004155042.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like [Cucumis sativus]
Length = 990
Score = 354 bits (909), Expect = 7e-95, Method: Compositional matrix adjust.
Identities = 205/635 (32%), Positives = 353/635 (55%), Gaps = 24/635 (3%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTG--VHGNSFTFPLVLKACANINSIWDGKRVHSHVLK 58
+IR + NG + E + S+L++G + + T +L C+ ++ G +H +K
Sbjct: 282 LIRGFSENGFWLEAYRAFRSLLESGDGLIPDVATMVTLLPVCSGEGNVDVGMVIHGMAVK 341
Query: 59 VGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAI 118
+G + V LIDMYSKC + + + + +SVVSWNS+I A+SR E
Sbjct: 342 LGLVHELMVCNALIDMYSKCGCLSEAAILFRK--IENKSVVSWNSMIGAYSREGFVFETF 399
Query: 119 LVLKEMWVLG--LELSASTFVSVVSGC-------SFR--QGISM-HCCVYKLGLLNNEIP 166
+L++MW+ +E++ T ++++ C S R G S+ H YK L+NN
Sbjct: 400 DLLRKMWMEEELMEVNEVTILNLLPACLEESELLSLRALHGYSLRHSFQYK-ELINN--- 455
Query: 167 LANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMS 226
+ ++ YAK G + A +F + S+ SW +IGG+ G+ +A +M R+
Sbjct: 456 ---AFIAAYAKCGSLVFAEHVFFGMNTKSVSSWNAVIGGHAQNGDPIKALDFYFEMTRLG 512
Query: 227 VTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELAR 286
+ PD ++L+L C ++G L +H +L++G + L+S+Y C R
Sbjct: 513 ILPDDFSIVSLLLACGRLGLLQYGKEIHGFVLRNGLEMNSFVAVSLLSLYFHCSKPFYGR 572
Query: 287 RVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELG 346
F+ + +K+ W +M+ GY+Q P+EA++LF+++L + P+E +A+ L AC++L
Sbjct: 573 TYFERMGDKNSVCWNAMLSGYSQNELPNEALSLFRQMLSDGLEPDEIAIASILGACSQLS 632
Query: 347 SLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMIN 406
+L GKE+ + + N L + V SL+ M++K G + ++ +F R+ K++A W+ MI
Sbjct: 633 ALGLGKEVHCFALKNSLMEDNFVACSLMDMYAKSGFLGHSQRIFNRLNGKEVASWNVMIT 692
Query: 407 GYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGI 466
G+ +HG G++A+ LF M+ + +PD + +L AC H+G+V +GL++ MQ+ + +
Sbjct: 693 GFGVHGQGNKAVELFEDMKRSDK-QPDRFTFLGVLQACCHAGLVSEGLNYLAQMQTLYKL 751
Query: 467 EPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAK 526
EP +EHY C++D+LGRAGR + AL I+EMP E A++W+ LLS+ + + ++E+GE A+
Sbjct: 752 EPELEHYACVIDMLGRAGRLNEALNFINEMPEEPDAKIWSSLLSSSITYVDLEMGEKFAE 811
Query: 527 NLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFV 586
LL L +YIL++NL+ +AG W R M D L K+ G S +E+ G V F+
Sbjct: 812 KLLALEANKADSYILLSNLYATAGKWDVVRMVRQKMKDLSLQKDVGCSWIELRGKVYSFI 871
Query: 587 AGDRSHHLSVDIRKTLKELHIKLLEAGYIAEADIV 621
AG+ S+ S +IRK L +++E GY + V
Sbjct: 872 AGENSNPSSDEIRKMWNRLEKQIVEIGYTPDCSCV 906
Score = 243 bits (620), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 147/458 (32%), Positives = 250/458 (54%), Gaps = 19/458 (4%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQ-TGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKV 59
++ N ++E + T+ ++ T ++FTFP ++KAC I GK VH +K+
Sbjct: 180 LVSGYVRNELYDEAIHTFLELISVTEFQPDNFTFPCLIKACTGKCDIHLGKSVHGMAVKM 239
Query: 60 GFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAIL 119
G D FV +I +Y KC + ++ D+MP ++++SWNS+I S EA
Sbjct: 240 GLIMDLFVGNAMIALYGKCGFLDEAVELFDKMPE--QNLISWNSLIRGFSENGFWLEAYR 297
Query: 120 VLKEMWVLGLEL--SASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMS 173
+ + G L +T V+++ CS G+ +H KLGL+ +E+ + N+++
Sbjct: 298 AFRSLLESGDGLIPDVATMVTLLPVCSGEGNVDVGMVIHGMAVKLGLV-HELMVCNALID 356
Query: 174 MYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDL-- 231
MY+K G ++EA +F +I S+VSW ++IG Y G V E F L +R+M + +L
Sbjct: 357 MYSKCGCLSEAAILFRKIENKSVVSWNSMIGAYSREGFVFETFDL---LRKMWMEEELME 413
Query: 232 ---VVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRV 288
V LNL+ C + L ++H L+ + ++ ++N ++ Y KCG L A V
Sbjct: 414 VNEVTILNLLPACLEESELLSLRALHGYSLRHSFQYKELINNAFIAAYAKCGSLVFAEHV 473
Query: 289 FDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSL 348
F + KSV W ++IGG+AQ G P +A++ + + + + P++ ++ + L AC LG L
Sbjct: 474 FFGMNTKSVSSWNAVIGGHAQNGDPIKALDFYFEMTRLGILPDDFSIVSLLLACGRLGLL 533
Query: 349 SKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGY 408
GKEI +++ NGLE N V SL+ ++ C + + FER+ DK+ W+AM++GY
Sbjct: 534 QYGKEIHGFVLRNGLEMNSFVAVSLLSLYFHCSKPFYGRTYFERMGDKNSVCWNAMLSGY 593
Query: 409 AIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSH 446
+ + + ++AL+LF +M +GL+PD + SIL ACS
Sbjct: 594 SQNELPNEALSLFRQMLS-DGLEPDEIAIASILGACSQ 630
Score = 177 bits (449), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 119/429 (27%), Positives = 222/429 (51%), Gaps = 14/429 (3%)
Query: 35 LVLKACANINSIWDGKRVHSHV-LKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPV 93
++L+ C ++ G+++ + + F D + T LI MYS C + SR V D +
Sbjct: 112 MLLQKCGQYKNVEIGRKLDEMLCVSSQFSGDFVLNTRLITMYSICGYPLESRLVFDRLLN 171
Query: 94 RLRSVVSWNSIISAHSRACLNDEAILVLKEMW-VLGLELSASTFVSVVSGCS----FRQG 148
+ ++ WN+++S + R L DEAI E+ V + TF ++ C+ G
Sbjct: 172 K--NLFQWNALVSGYVRNELYDEAIHTFLELISVTEFQPDNFTFPCLIKACTGKCDIHLG 229
Query: 149 ISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVN 208
S+H K+GL+ ++ + N+++++Y K G ++EA +FD++ E +++SW ++I G+
Sbjct: 230 KSVHGMAVKMGLI-MDLFVGNAMIALYGKCGFLDEAVELFDKMPEQNLISWNSLIRGFSE 288
Query: 209 VGNVNEAFGLCNQMRRM--SVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNED 266
G EA+ + + PD+ + L+ C+ GN+ + + +H + +K G +E
Sbjct: 289 NGFWLEAYRAFRSLLESGDGLIPDVATMVTLLPVCSGEGNVDVGMVIHGMAVKLGLVHEL 348
Query: 267 PLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKT 326
+ N L+ MY+KCG L A +F + KSV W SMIG Y++ G+ E +L +++
Sbjct: 349 MVCNALIDMYSKCGCLSEAAILFRKIENKSVVSWNSMIGAYSREGFVFETFDLLRKMWME 408
Query: 327 S--VRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRIN 384
+ NE T+ L AC E L + + Y + + + + + I ++KCG +
Sbjct: 409 EELMEVNEVTILNLLPACLEESELLSLRALHGYSLRHSFQYKELINNAFIAAYAKCGSLV 468
Query: 385 KAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSAC 444
A+ VF + K ++ W+A+I G+A +G +AL+ +++M + G+ PD S+L AC
Sbjct: 469 FAEHVFFGMNTKSVSSWNAVIGGHAQNGDPIKALDFYFEMTRL-GILPDDFSIVSLLLAC 527
Query: 445 SHSGMVDDG 453
G++ G
Sbjct: 528 GRLGLLQYG 536
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/251 (27%), Positives = 130/251 (51%), Gaps = 4/251 (1%)
Query: 237 LILGCAQVGNLFLALSMHSLL-LKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEK 295
L+ C Q N+ + + +L + S ++ + L+ L++MY+ CG +R VFD +L K
Sbjct: 113 LLQKCGQYKNVEIGRKLDEMLCVSSQFSGDFVLNTRLITMYSICGYPLESRLVFDRLLNK 172
Query: 296 SVFLWTSMIGGYAQLGYPSEAVNLFKRLLK-TSVRPNEATLATTLSACAELGSLSKGKEI 354
++F W +++ GY + EA++ F L+ T +P+ T + AC + GK +
Sbjct: 173 NLFQWNALVSGYVRNELYDEAIHTFLELISVTEFQPDNFTFPCLIKACTGKCDIHLGKSV 232
Query: 355 EEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMG 414
V GL + V ++I ++ KCG +++A E+F+++P+++L W+++I G++ +G
Sbjct: 233 HGMAVKMGLIMDLFVGNAMIALYGKCGFLDEAVELFDKMPEQNLISWNSLIRGFSENGFW 292
Query: 415 DQALNLFYK-MQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHY 473
+A F ++ +GL PD ++L CS G VD G+ M G+ +
Sbjct: 293 LEAYRAFRSLLESGDGLIPDVATMVTLLPVCSGEGNVDVGM-VIHGMAVKLGLVHELMVC 351
Query: 474 LCLVDLLGRAG 484
L+D+ + G
Sbjct: 352 NALIDMYSKCG 362
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 94/187 (50%), Gaps = 6/187 (3%)
Query: 316 AVNLFKRLLKTS----VRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQV-Q 370
A++ +R K + + + + L C + ++ G++++E + ++ S V
Sbjct: 87 ALDFLQRAWKNNAGYDLAQRKEAMGMLLQKCGQYKNVEIGRKLDEMLCVSSQFSGDFVLN 146
Query: 371 TSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGL 430
T LI M+S CG +++ VF+R+ +K+L W+A+++GY + + D+A++ F ++ V
Sbjct: 147 TRLITMYSICGYPLESRLVFDRLLNKNLFQWNALVSGYVRNELYDEAIHTFLELISVTEF 206
Query: 431 KPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLAL 490
+PD + ++ AC+ + G S M G+ + ++ L G+ G D A+
Sbjct: 207 QPDNFTFPCLIKACTGKCDIHLGKS-VHGMAVKMGLIMDLFVGNAMIALYGKCGFLDEAV 265
Query: 491 KTIHEMP 497
+ +MP
Sbjct: 266 ELFDKMP 272
>gi|347954534|gb|AEP33767.1| organelle transcript processing 82, partial [Matthiola incana]
Length = 694
Score = 354 bits (909), Expect = 7e-95, Method: Compositional matrix adjust.
Identities = 205/616 (33%), Positives = 347/616 (56%), Gaps = 48/616 (7%)
Query: 50 KRVHSHVLKVGFQQDAFVQTGLID---MYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIIS 106
+ +H+ ++K G + + L++ + F + V D ++ +++ WN++
Sbjct: 5 RXIHAQMIKTGLHNTNYALSKLLEFCVVSPHFDGFPYAISVFD--TIQEPNLLIWNTMFR 62
Query: 107 AHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLN 162
H+ + A+ + M LGL + TF ++ C+ ++G +H V KLG +
Sbjct: 63 GHALSSDPVSALKLYLVMISLGLLPDSYTFPFLLKSCAKSKIRKEGQQIHGHVLKLGF-D 121
Query: 163 NEIPLANSVMSMYAKFGKVNEARSIFD-------------------------------EI 191
+I + S++SMYA+ G++ +AR +FD EI
Sbjct: 122 LDIYVHTSLISMYAQNGRLEDARKVFDISSHRDVVSYTALIAGYVSRGYIESAQKLFDEI 181
Query: 192 GETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMS-VTPDLVVFLNLILGCAQVGNLFLA 250
+VSW +I GYV GN EA L +M M+ V PD + ++ CAQ ++ L
Sbjct: 182 PGKDVVSWNAMISGYVETGNYKEALELFKEMMMMTNVRPDESTMVTVVSACAQSDSIELG 241
Query: 251 LSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQL 310
+HS + G+ + + N L+ +Y+K G++E A +FD + K V W ++IGGY +
Sbjct: 242 RHVHSWINDHGFASNLKIVNALIDLYSKFGEVETACELFDGLWNKDVISWNTLIGGYTHM 301
Query: 311 GYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYI--VLNGLESN-R 367
EA+ LF+ +L++ PN+ T+ + L ACA LG++ G+ I YI L G+ +N
Sbjct: 302 NLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYINKKLKGVVTNVS 361
Query: 368 QVQTSLIHMFSKCGRINKAKEVFER-VPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQH 426
+QTSLI M++KCG I+ A++VF+ + ++ L+ W+AMI+G+A+HG + A ++F +M+
Sbjct: 362 SLQTSLIDMYAKCGDIDAAQQVFDSSMSNRSLSTWNAMISGFAMHGRANAAFDIFSRMR- 420
Query: 427 VEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRF 486
+ G++PD + + +LSACSHSGM+D G + F+SM + I P +EHY C++DLLG +G F
Sbjct: 421 MNGIEPDDITFVGLLSACSHSGMLDLGRNIFRSMTRGYEITPKLEHYGCMIDLLGHSGLF 480
Query: 487 DLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLF 546
A + I+ MP+E +W LL AC H N+ELGE AK L+ + PG++G+Y+L++N++
Sbjct: 481 KEAEEMINTMPMEPDGVIWCSLLKACKIHGNLELGESFAKKLIKIEPGNSGSYVLLSNIY 540
Query: 547 TSAGMWKEAATARGLMDDRRLTKE-PGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKEL 605
+AG W E A R L++D+ + K+ PG S +EID V F+ GD+ H + +I L+E+
Sbjct: 541 AAAGRWNEVAKIRALLNDKGMKKKVPGCSSIEIDSVVHEFIIGDKLHPQNREIYGMLEEM 600
Query: 606 HIKLLEAGYIAEADIV 621
+ L EAG++ + V
Sbjct: 601 EVLLEEAGFVPDTSEV 616
Score = 209 bits (532), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 133/441 (30%), Positives = 222/441 (50%), Gaps = 47/441 (10%)
Query: 15 LSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDM 74
L Y M+ G+ +S+TFP +LK+CA +G+++H HVLK+GF D +V T LI M
Sbjct: 74 LKLYLVMISLGLLPDSYTFPFLLKSCAKSKIRKEGQQIHGHVLKLGFDLDIYVHTSLISM 133
Query: 75 YSKCSDFVSSRKV-------------------------------LDEMPVRLRSVVSWNS 103
Y++ +RKV DE+P + VVSWN+
Sbjct: 134 YAQNGRLEDARKVFDISSHRDVVSYTALIAGYVSRGYIESAQKLFDEIPG--KDVVSWNA 191
Query: 104 IISAHSRACLNDEAILVLKEMWVL-GLELSASTFVSVVSGC----SFRQGISMHCCVYKL 158
+IS + EA+ + KEM ++ + ST V+VVS C S G +H +
Sbjct: 192 MISGYVETGNYKEALELFKEMMMMTNVRPDESTMVTVVSACAQSDSIELGRHVHSWINDH 251
Query: 159 GLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGL 218
G +N + + N+++ +Y+KFG+V A +FD + ++SW T+IGGY ++ EA L
Sbjct: 252 GFASN-LKIVNALIDLYSKFGEVETACELFDGLWNKDVISWNTLIGGYTHMNLYKEALLL 310
Query: 219 CNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLL---LKSGYNNEDPLDNLLVSM 275
+M R TP+ V L+++ CA +G + + +H + LK N L L+ M
Sbjct: 311 FQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYINKKLKGVVTNVSSLQTSLIDM 370
Query: 276 YTKCGDLELARRVFDAVLE-KSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEAT 334
Y KCGD++ A++VFD+ + +S+ W +MI G+A G + A ++F R+ + P++ T
Sbjct: 371 YAKCGDIDAAQQVFDSSMSNRSLSTWNAMISGFAMHGRANAAFDIFSRMRMNGIEPDDIT 430
Query: 335 LATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQ--TSLIHMFSKCGRINKAKEVFER 392
LSAC+ G L G+ I + G E +++ +I + G +A+E+
Sbjct: 431 FVGLLSACSHSGMLDLGRNIFRSMT-RGYEITPKLEHYGCMIDLLGHSGLFKEAEEMINT 489
Query: 393 VP-DKDLAVWSAMINGYAIHG 412
+P + D +W +++ IHG
Sbjct: 490 MPMEPDGVIWCSLLKACKIHG 510
>gi|347954538|gb|AEP33769.1| organelle transcript processing 82, partial [Olimarabidopsis
pumila]
Length = 710
Score = 354 bits (909), Expect = 7e-95, Method: Compositional matrix adjust.
Identities = 201/631 (31%), Positives = 342/631 (54%), Gaps = 57/631 (9%)
Query: 36 VLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMP--- 92
+L C + S+ + +H+ ++K G + + L++ F D +P
Sbjct: 8 LLHXCKTLQSL---RIIHAQMIKTGLHNTNYALSKLLEXCVLSPHF-------DGLPYAI 57
Query: 93 -----VRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCS--- 144
++ ++ WN++ H+ + A+ + M LGL ++ TF ++ C+
Sbjct: 58 SVFDTIQEPXLLIWNTMFRGHALSSDPVSALKLYVCMVSLGLLPNSYTFPFLLKSCAKSX 117
Query: 145 -FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSI---------------- 187
F++G +H V K G + ++ + S++SMY + G++ +A+ +
Sbjct: 118 AFKEGQQLHGQVLKFGF-DLDLYIHTSLISMYVQNGRLEDAQKVXDKSSHRDVVSYTALI 176
Query: 188 ---------------FDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLV 232
FDEI +VSW I GY GN EA L +M + +V PD
Sbjct: 177 TGYASRGXIESAHKMFDEIPVKDVVSWNAXISGYAETGNYKEALELFKKMMKTNVRPDES 236
Query: 233 VFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAV 292
+ ++ CAQ G++ L +HS + G+ + N L+ +Y+KCG+LE A +F +
Sbjct: 237 TMVTVLSACAQSGSIELGRQVHSWINDHGFGXNLKIVNALIDLYSKCGELETACGLFQGL 296
Query: 293 LEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGK 352
K V W ++IGGY + EA+ LF+ +L++ +PN+ T+ + LSACA LG++ G+
Sbjct: 297 SNKDVISWNTLIGGYTHMNLYKEALLLFQDMLRSGEKPNDVTMLSILSACAHLGAIDIGR 356
Query: 353 EIEEYI--VLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAI 410
I YI L G+ + ++TSLI M++KCG I A++VF+ + ++ L+ W+AMI G+A+
Sbjct: 357 WIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAQQVFDSMLNRSLSSWNAMIFGFAM 416
Query: 411 HGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSI 470
HG + A ++F +M+ G++PD + + +LSACSHSGM+D G F+SM ++ + P +
Sbjct: 417 HGRANAAFDIFSRMRK-NGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTRDYKLMPKL 475
Query: 471 EHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLT 530
EHY C++DL G +G F A K I+ M +E +W LL AC H NVELGE A+NL+
Sbjct: 476 EHYGCMIDLXGHSGLFKEAEKMINTMEMEPDGVIWCSLLKACKMHGNVELGESYAQNLIK 535
Query: 531 LNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDR 590
+ P + G+Y+L++N++ +A W E A R L++D+ + K PG S +EID V F+ GD+
Sbjct: 536 IEPENPGSYVLLSNIYATAERWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDK 595
Query: 591 SHHLSVDIRKTLKELHIKLLEAGYIAEADIV 621
H + +I L+E+ + L EAG++ + V
Sbjct: 596 FHPRNREIYGMLEEMEVLLEEAGFVPDTSEV 626
Score = 211 bits (537), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 149/516 (28%), Positives = 243/516 (47%), Gaps = 78/516 (15%)
Query: 15 LSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDM 74
L Y M+ G+ NS+TFP +LK+CA + +G+++H VLK GF D ++ T LI M
Sbjct: 88 LKLYVCMVSLGLLPNSYTFPFLLKSCAKSXAFKEGQQLHGQVLKFGFDLDLYIHTSLISM 147
Query: 75 Y---------------SKCSDFV----------------SSRKVLDEMPVRLRSVVSWNS 103
Y S D V S+ K+ DE+PV + VVSWN+
Sbjct: 148 YVQNGRLEDAQKVXDKSSHRDVVSYTALITGYASRGXIESAHKMFDEIPV--KDVVSWNA 205
Query: 104 IISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGC----SFRQGISMHCCVYKLG 159
IS ++ EA+ + K+M + ST V+V+S C S G +H + G
Sbjct: 206 XISGYAETGNYKEALELFKKMMKTNVRPDESTMVTVLSACAQSGSIELGRQVHSWINDHG 265
Query: 160 LLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLC 219
N + + N+++ +Y+K G++ A +F + ++SW T+IGGY ++ EA L
Sbjct: 266 FGXN-LKIVNALIDLYSKCGELETACGLFQGLSNKDVISWNTLIGGYTHMNLYKEALLLF 324
Query: 220 NQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLK--SGYNNEDPLDNLLVSMYT 277
M R P+ V L+++ CA +G + + +H + K G N L L+ MY
Sbjct: 325 QDMLRSGEKPNDVTMLSILSACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYA 384
Query: 278 KCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLAT 337
KCGD+E A++VFD++L +S+ W +MI G+A G + A ++F R+ K + P++ T
Sbjct: 385 KCGDIEAAQQVFDSMLNRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNGIEPDDITFVG 444
Query: 338 TLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKD 397
LSAC+ G L G+ H+F R K E
Sbjct: 445 LLSACSHSGMLDLGR----------------------HIFRSMTRDYKLMPKLEH----- 477
Query: 398 LAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFF 457
+ MI+ G+ +A + M+ ++PD V++ S+L AC G V+ G S+
Sbjct: 478 ---YGCMIDLXGHSGLFKEAEKMINTME----MEPDGVIWCSLLKACKMHGNVELGESYA 530
Query: 458 KSMQSNFGIEP-SIEHYLCLVDLLGRAGRFDLALKT 492
+++ IEP + Y+ L ++ A R++ KT
Sbjct: 531 QNL---IKIEPENPGSYVLLSNIYATAERWNEVAKT 563
>gi|347954540|gb|AEP33770.1| organelle transcript processing 82, partial [Raphanus sativus]
Length = 675
Score = 354 bits (908), Expect = 8e-95, Method: Compositional matrix adjust.
Identities = 192/562 (34%), Positives = 315/562 (56%), Gaps = 43/562 (7%)
Query: 101 WNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVY 156
WN+++ H+ + A+ + M LG ++ +F ++ C+ F +G +H V
Sbjct: 32 WNTMLRGHASSSDPVSALEMYVRMVSLGHLPNSYSFPFLLKSCAKSKAFEEGRQIHAQVL 91
Query: 157 KLGLLNNEIPLANSVMSMYAKFGKVNEARSIFD--------------------------- 189
KLG + + S++SMYA+ G + +AR +FD
Sbjct: 92 KLGCGLDRY-VHTSLISMYARNGGLEDARKVFDASSHRDVVSCTALITGYASRGDFRSAR 150
Query: 190 ----EIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVG 245
EI E +VSW +I GYV G EA L +M R +V PD ++++ CAQ G
Sbjct: 151 KVFDEITERDVVSWNAMITGYVENGRYEEALELFKEMMRTNVRPDEGTLVSVVSACAQSG 210
Query: 246 NLFLALSMHSLLLKS----GYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWT 301
++ L +HS + G+++ + N L+ +Y+KCGD+E A +F+ + K V W
Sbjct: 211 SIELGRQVHSWVDDDDDDHGFSSSLKIVNALIDLYSKCGDVETAFGLFEGLSCKDVVSWN 270
Query: 302 SMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYI--V 359
++IGGY EA+ LF+ +L++ PN+ TL + L ACA LG++ G+ I YI
Sbjct: 271 TLIGGYTHTNLYKEALLLFQEMLRSGECPNDVTLLSVLPACAHLGAIDIGRWIHVYIDKK 330
Query: 360 LNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALN 419
L G+ + ++TSLI M++KCG I A +VF + + L+ W+AMI G+A+HG + A +
Sbjct: 331 LKGVTNETSLRTSLIDMYAKCGDIEAAHQVFNSMLYRSLSSWNAMIFGFAMHGRANAAFD 390
Query: 420 LFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDL 479
LF +M+ ++PD + + +LSACSHSG++D G FKSM ++ + P +EHY C++DL
Sbjct: 391 LFSRMRG-NRVEPDDITFVGLLSACSHSGLLDLGRQIFKSMTQDYNLTPKLEHYGCMIDL 449
Query: 480 LGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNY 539
LG +G F A + IH MP+E +W LL AC KH N+EL E A+ L+ + P ++G+Y
Sbjct: 450 LGHSGLFKEAEEMIHTMPMEPDGVIWCSLLKACKKHGNLELAESFAQKLIKIEPENSGSY 509
Query: 540 ILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIR 599
+L++N++ +AG W++ A RG+++ + + K PG S +E+D V F+ GD+ H +I
Sbjct: 510 VLLSNIYATAGRWEDVARVRGVLNGKGMKKVPGCSSIEVDSVVHEFIIGDKLHPRRREIY 569
Query: 600 KTLKELHIKLLEAGYIAEADIV 621
L+E+ ++L EAG+ + V
Sbjct: 570 HMLEEMDVQLEEAGFAPDTSEV 591
Score = 211 bits (536), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 138/470 (29%), Positives = 230/470 (48%), Gaps = 44/470 (9%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
M+R ++ L Y M+ G NS++FP +LK+CA + +G+++H+ VLK+G
Sbjct: 35 MLRGHASSSDPVSALEMYVRMVSLGHLPNSYSFPFLLKSCAKSKAFEEGRQIHAQVLKLG 94
Query: 61 FQQDAFVQTGLIDMYSK---------------------CS----------DFVSSRKVLD 89
D +V T LI MY++ C+ DF S+RKV D
Sbjct: 95 CGLDRYVHTSLISMYARNGGLEDARKVFDASSHRDVVSCTALITGYASRGDFRSARKVFD 154
Query: 90 EMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGC----SF 145
E + R VVSWN++I+ + +EA+ + KEM + T VSVVS C S
Sbjct: 155 E--ITERDVVSWNAMITGYVENGRYEEALELFKEMMRTNVRPDEGTLVSVVSACAQSGSI 212
Query: 146 RQGISMHCCVYKLGL---LNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTI 202
G +H V ++ + + N+++ +Y+K G V A +F+ + +VSW T+
Sbjct: 213 ELGRQVHSWVDDDDDDHGFSSSLKIVNALIDLYSKCGDVETAFGLFEGLSCKDVVSWNTL 272
Query: 203 IGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLK--S 260
IGGY + EA L +M R P+ V L+++ CA +G + + +H + K
Sbjct: 273 IGGYTHTNLYKEALLLFQEMLRSGECPNDVTLLSVLPACAHLGAIDIGRWIHVYIDKKLK 332
Query: 261 GYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLF 320
G NE L L+ MY KCGD+E A +VF+++L +S+ W +MI G+A G + A +LF
Sbjct: 333 GVTNETSLRTSLIDMYAKCGDIEAAHQVFNSMLYRSLSSWNAMIFGFAMHGRANAAFDLF 392
Query: 321 KRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLN-GLESNRQVQTSLIHMFSK 379
R+ V P++ T LSAC+ G L G++I + + + L + +I +
Sbjct: 393 SRMRGNRVEPDDITFVGLLSACSHSGLLDLGRQIFKSMTQDYNLTPKLEHYGCMIDLLGH 452
Query: 380 CGRINKAKEVFERVP-DKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVE 428
G +A+E+ +P + D +W +++ HG + A + K+ +E
Sbjct: 453 SGLFKEAEEMIHTMPMEPDGVIWCSLLKACKKHGNLELAESFAQKLIKIE 502
>gi|356509847|ref|XP_003523656.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
[Glycine max]
Length = 1611
Score = 354 bits (908), Expect = 8e-95, Method: Compositional matrix adjust.
Identities = 201/613 (32%), Positives = 330/613 (53%), Gaps = 9/613 (1%)
Query: 13 ETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLI 72
E + + M+ + V + TF ++L A +N + GK++H V++ G Q V LI
Sbjct: 918 EAVDCFVDMINSRVACDGLTFVVMLTVVAGLNCLELGKQIHGIVMRSGLDQVVSVGNCLI 977
Query: 73 DMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELS 132
+MY K +R V +M ++SWN++IS + + L + ++ + + L
Sbjct: 978 NMYVKAGSVSRARSVFGQM--NEVDLISWNTMISGCTLSGLEECSVGMFVHLLRDSLLPD 1035
Query: 133 ASTFVSVVSGCSFRQG-----ISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSI 187
T SV+ CS +G +H C K G++ + ++ +++ +Y+K GK+ EA +
Sbjct: 1036 QFTVASVLRACSSLEGGYYLATQIHACAMKAGVVLDSF-VSTALIDVYSKRGKMEEAEFL 1094
Query: 188 FDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNL 247
F + SW I+ GY+ G+ +A L M+ D + +N + L
Sbjct: 1095 FVNQDGFDLASWNAIMHGYIVSGDFPKALRLYILMQESGERSDQITLVNAAKAAGGLVGL 1154
Query: 248 FLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGY 307
+H++++K G+N + + + ++ MY KCG++E ARRVF + WT+MI G
Sbjct: 1155 KQGKQIHAVVVKRGFNLDLFVTSGVLDMYLKCGEMESARRVFSEIPSPDDVAWTTMISGC 1214
Query: 308 AQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNR 367
+ G A+ + ++ + V+P+E T AT + AC+ L +L +G++I IV +
Sbjct: 1215 VENGQEEHALFTYHQMRLSKVQPDEYTFATLVKACSLLTALEQGRQIHANIVKLNCAFDP 1274
Query: 368 QVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHV 427
V TSL+ M++KCG I A+ +F+R + +A W+AMI G A HG +AL F+K
Sbjct: 1275 FVMTSLVDMYAKCGNIEDARGLFKRTNTRRIASWNAMIVGLAQHGNAKEALQ-FFKYMKS 1333
Query: 428 EGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFD 487
G+ PD V + +LSACSHSG+V + F SMQ N+GIEP IEHY CLVD L RAGR +
Sbjct: 1334 RGVMPDRVTFIGVLSACSHSGLVSEAYENFYSMQKNYGIEPEIEHYSCLVDALSRAGRIE 1393
Query: 488 LALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFT 547
A K I MP E A ++ LL+AC + E G+ A+ LL L P + Y+L++N++
Sbjct: 1394 EAEKVISSMPFEASASMYRTLLNACRVQVDRETGKRVAEKLLALEPSDSAAYVLLSNVYA 1453
Query: 548 SAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKELHI 607
+A W+ A+AR +M + K+PG+S V++ V +FVAGDRSH + I ++ +
Sbjct: 1454 AANQWENVASARNMMRKVNVKKDPGFSWVDLKNKVHLFVAGDRSHEETDVIYNKVEYIMK 1513
Query: 608 KLLEAGYIAEADI 620
++ E GY+ + D
Sbjct: 1514 RIREEGYVPDTDF 1526
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 117/405 (28%), Positives = 192/405 (47%), Gaps = 19/405 (4%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANIN-SIWDGKRVHSHVLKV 59
MI T +G E ++ + +L+ + + FT VL+AC+++ + ++H+ +K
Sbjct: 1007 MISGCTLSGLEECSVGMFVHLLRDSLLPDQFTVASVLRACSSLEGGYYLATQIHACAMKA 1066
Query: 60 GFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRS-----VVSWNSIISAHSRACLN 114
G D+FV T LID+YSK R ++E + + SWN+I+ + +
Sbjct: 1067 GVVLDSFVSTALIDVYSK-------RGKMEEAEFLFVNQDGFDLASWNAIMHGYIVSGDF 1119
Query: 115 DEAILVLKEMWVLGLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANS 170
+A+ + M G T V+ +QG +H V K G N ++ + +
Sbjct: 1120 PKALRLYILMQESGERSDQITLVNAAKAAGGLVGLKQGKQIHAVVVKRG-FNLDLFVTSG 1178
Query: 171 VMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPD 230
V+ MY K G++ AR +F EI V+WTT+I G V G A +QMR V PD
Sbjct: 1179 VLDMYLKCGEMESARRVFSEIPSPDDVAWTTMISGCVENGQEEHALFTYHQMRLSKVQPD 1238
Query: 231 LVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFD 290
F L+ C+ + L +H+ ++K + + LV MY KCG++E AR +F
Sbjct: 1239 EYTFATLVKACSLLTALEQGRQIHANIVKLNCAFDPFVMTSLVDMYAKCGNIEDARGLFK 1298
Query: 291 AVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSK 350
+ + W +MI G AQ G EA+ FK + V P+ T LSAC+ G +S+
Sbjct: 1299 RTNTRRIASWNAMIVGLAQHGNAKEALQFFKYMKSRGVMPDRVTFIGVLSACSHSGLVSE 1358
Query: 351 GKEIEEYIVLN-GLESNRQVQTSLIHMFSKCGRINKAKEVFERVP 394
E + N G+E + + L+ S+ GRI +A++V +P
Sbjct: 1359 AYENFYSMQKNYGIEPEIEHYSCLVDALSRAGRIEEAEKVISSMP 1403
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 109/404 (26%), Positives = 187/404 (46%), Gaps = 38/404 (9%)
Query: 49 GKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISA- 107
GKR H+ +L G D FV LI MY+KC S+RK+ D P R +V+WN+I+SA
Sbjct: 675 GKRAHARILTSGHHPDRFVTNNLITMYAKCGSLSSARKLFDTTPDTNRDLVTWNAILSAL 734
Query: 108 HSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNN 163
+ A + + + + + + + T V C S S+H K+G L
Sbjct: 735 AAHADKSHDGFHLFRLLRRSVVSTTRHTLAPVFKMCLLSASPSASESLHGYAVKIG-LQW 793
Query: 164 EIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMR 223
++ +A +++++YAKFG + EAR +FD + +V W ++ YV+ EA L ++
Sbjct: 794 DVFVAGALVNIYAKFGLIREARVLFDGMAVRDVVLWNVMMKAYVDTCLEYEAMLLFSEFH 853
Query: 224 RMSVTPDLVVF--LNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGD 281
R PD V L+ ++ C + N+ + K ++D D
Sbjct: 854 RTGFRPDDVTLRTLSRVVKCKK--NILELKQFKAYATKLFMYDDDGSD------------ 899
Query: 282 LELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSA 341
V +W + + Q G EAV+ F ++ + V + T L+
Sbjct: 900 ---------------VIVWNKALSRFLQRGEAWEAVDCFVDMINSRVACDGLTFVVMLTV 944
Query: 342 CAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVW 401
A L L GK+I ++ +GL+ V LI+M+ K G +++A+ VF ++ + DL W
Sbjct: 945 VAGLNCLELGKQIHGIVMRSGLDQVVSVGNCLINMYVKAGSVSRARSVFGQMNEVDLISW 1004
Query: 402 SAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACS 445
+ MI+G + G+ + ++ +F + + L PD S+L ACS
Sbjct: 1005 NTMISGCTLSGLEECSVGMFVHLLR-DSLLPDQFTVASVLRACS 1047
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 126/492 (25%), Positives = 222/492 (45%), Gaps = 36/492 (7%)
Query: 32 TFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEM 91
T V K C S + +H + +K+G Q D FV L+++Y+K +R + D M
Sbjct: 762 TLAPVFKMCLLSASPSASESLHGYAVKIGLQWDVFVAGALVNIYAKFGLIREARVLFDGM 821
Query: 92 PVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCSFRQGISM 151
VR VV WN ++ A+ CL EA+L+ E G T
Sbjct: 822 AVR--DVVLWNVMMKAYVDTCLEYEAMLLFSEFHRTGFRPDDVT---------------- 863
Query: 152 HCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGN 211
L L+ + +++ + +F ++D+ G IV W + ++ G
Sbjct: 864 ------LRTLSRVVKCKKNILEL-KQFKAYATKLFMYDDDGSDVIV-WNKALSRFLQRGE 915
Query: 212 VNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNL 271
EA M V D + F+ ++ A + L L +H ++++SG + + N
Sbjct: 916 AWEAVDCFVDMINSRVACDGLTFVVMLTVVAGLNCLELGKQIHGIVMRSGLDQVVSVGNC 975
Query: 272 LVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPN 331
L++MY K G + AR VF + E + W +MI G G +V +F LL+ S+ P+
Sbjct: 976 LINMYVKAGSVSRARSVFGQMNEVDLISWNTMISGCTLSGLEECSVGMFVHLLRDSLLPD 1035
Query: 332 EATLATTLSACAEL-GSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVF 390
+ T+A+ L AC+ L G +I + G+ + V T+LI ++SK G++ +A+ +F
Sbjct: 1036 QFTVASVLRACSSLEGGYYLATQIHACAMKAGVVLDSFVSTALIDVYSKRGKMEEAEFLF 1095
Query: 391 ERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMV 450
DLA W+A+++GY + G +AL L+ MQ G + D + T + +A + G+V
Sbjct: 1096 VNQDGFDLASWNAIMHGYIVSGDFPKALRLYILMQE-SGERSDQI--TLVNAAKAAGGLV 1152
Query: 451 DDGLSFFKSMQS---NFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAP 507
GL K + + G + ++D+ + G + A + E+P W
Sbjct: 1153 --GLKQGKQIHAVVVKRGFNLDLFVTSGVLDMYLKCGEMESARRVFSEIPSPDDV-AWTT 1209
Query: 508 LLSACMKHHNVE 519
++S C+++ E
Sbjct: 1210 MISGCVENGQEE 1221
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 84/303 (27%), Positives = 144/303 (47%), Gaps = 9/303 (2%)
Query: 8 NGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFV 67
+G F + L Y M ++G + T KA + + GK++H+ V+K GF D FV
Sbjct: 1116 SGDFPKALRLYILMQESGERSDQITLVNAAKAAGGLVGLKQGKQIHAVVVKRGFNLDLFV 1175
Query: 68 QTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVL 127
+G++DMY KC + S+R+V E+P V+W ++IS + A+ +M +
Sbjct: 1176 TSGVLDMYLKCGEMESARRVFSEIPS--PDDVAWTTMISGCVENGQEEHALFTYHQMRLS 1233
Query: 128 GLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNE 183
++ TF ++V CS QG +H + KL + + S++ MYAK G + +
Sbjct: 1234 KVQPDEYTFATLVKACSLLTALEQGRQIHANIVKLNCAFDPFVM-TSLVDMYAKCGNIED 1292
Query: 184 ARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQ 243
AR +F I SW +I G GN EA M+ V PD V F+ ++ C+
Sbjct: 1293 ARGLFKRTNTRRIASWNAMIVGLAQHGNAKEALQFFKYMKSRGVMPDRVTFIGVLSACSH 1352
Query: 244 VGNLFLAL-SMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAV-LEKSVFLWT 301
G + A + +S+ G E + LV ++ G +E A +V ++ E S ++
Sbjct: 1353 SGLVSEAYENFYSMQKNYGIEPEIEHYSCLVDALSRAGRIEEAEKVISSMPFEASASMYR 1412
Query: 302 SMI 304
+++
Sbjct: 1413 TLL 1415
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 103/198 (52%), Gaps = 4/198 (2%)
Query: 246 NLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLE--KSVFLWTSM 303
+L L H+ +L SG++ + + N L++MY KCG L AR++FD + + + W ++
Sbjct: 671 DLSLGKRAHARILTSGHHPDRFVTNNLITMYAKCGSLSSARKLFDTTPDTNRDLVTWNAI 730
Query: 304 IGGYAQLGYPS-EAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNG 362
+ A S + +LF+ L ++ V TLA C S S + + Y V G
Sbjct: 731 LSALAAHADKSHDGFHLFRLLRRSVVSTTRHTLAPVFKMCLLSASPSASESLHGYAVKIG 790
Query: 363 LESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFY 422
L+ + V +L+++++K G I +A+ +F+ + +D+ +W+ M+ Y + +A+ LF
Sbjct: 791 LQWDVFVAGALVNIYAKFGLIREARVLFDGMAVRDVVLWNVMMKAYVDTCLEYEAMLLFS 850
Query: 423 KMQHVEGLKPDAVVYTSI 440
+ H G +PD V ++
Sbjct: 851 EF-HRTGFRPDDVTLRTL 867
>gi|147845321|emb|CAN83351.1| hypothetical protein VITISV_028907 [Vitis vinifera]
Length = 948
Score = 354 bits (908), Expect = 9e-95, Method: Compositional matrix adjust.
Identities = 199/624 (31%), Positives = 336/624 (53%), Gaps = 8/624 (1%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+I NG + E L Y GV +S+T VL+AC + S+ +G +H + K+G
Sbjct: 246 LISGYNANGYWNEALEIYYRFRNLGVVPDSYTMSSVLRACGGLGSVEEGDIIHGLIEKIG 305
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
++D V GL+ MY K + + R++ D+M LR VSWN++I +S+ L +E+I +
Sbjct: 306 IKKDVIVNNGLLSMYCKFNGLIDGRRIFDKMV--LRDAVSWNTMICGYSQVGLYEESIKL 363
Query: 121 LKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGLLNN---EIPLANSVMSMYAK 177
EM V + T S++ C + V+ + + + +N +++MYAK
Sbjct: 364 FMEM-VNQFKPDLLTITSILQACGHLGDLEFGKYVHDYMITSGYECDTTASNILINMYAK 422
Query: 178 FGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNL 237
G + ++ +F + VSW ++I Y+ G+ +EA L +M + V PD V ++ L
Sbjct: 423 CGNLLASQEVFSGMKCKDSVSWNSMINVYIQNGSFDEAMKLF-KMMKTDVKPDSVTYVML 481
Query: 238 ILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSV 297
+ Q+G+L L +H L K G+N+ + N LV MY KCG++ + +VF+ + + +
Sbjct: 482 LSMSTQLGDLXLGKELHCDLAKMGFNSNIVVSNTLVDMYAKCGEMGDSLKVFENMKARDI 541
Query: 298 FLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEY 357
W ++I + + + R+ V P+ AT+ + L C+ L + +GKEI
Sbjct: 542 ITWNTIIASCVHSEDCNLGLRMISRMRTEGVTPDMATMLSILPVCSLLAAKRQGKEIHGC 601
Query: 358 IVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQA 417
I GLES+ V LI M+SKCG + + +VF+ + KD+ W+A+I+ ++G G +A
Sbjct: 602 IFKLGLESDVPVGNVLIEMYSKCGSLRNSFQVFKLMKTKDVVTWTALISACGMYGEGKKA 661
Query: 418 LNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLV 477
+ F +M+ G+ PD V + +I+ ACSHSG+V++GL++F M+ ++ IEP IEHY C+V
Sbjct: 662 VRAFGEME-AAGIVPDHVAFVAIIFACSHSGLVEEGLNYFHRMKKDYKIEPRIEHYACVV 720
Query: 478 DLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTG 537
DLL R+ D A I MP++ + +W LLSAC + E+ + ++ ++ LNP TG
Sbjct: 721 DLLSRSALLDKAEDFILSMPLKPDSSIWGALLSACRMSGDTEIAQRVSERIIELNPDDTG 780
Query: 538 NYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVD 597
Y+L++N++ + G W + + R + R L K+PG S +EI V VF G + +
Sbjct: 781 YYVLVSNVYAALGKWDQVRSIRKSIKARGLKKDPGCSWMEIQNKVYVFGTGTKFSEQFEE 840
Query: 598 IRKTLKELHIKLLEAGYIAEADIV 621
+ K L L + + GYIA V
Sbjct: 841 VNKLLGMLAGLMAKEGYIANLQFV 864
Score = 265 bits (676), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 165/516 (31%), Positives = 261/516 (50%), Gaps = 12/516 (2%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+IR T+NG F E LS YS + + +++TFP V+ ACA + K +H VL +G
Sbjct: 145 IIRALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINACAGLLDFEMAKSIHDRVLXMG 204
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F D ++ LIDMY + +D +RKV +EMP LR VVSWNS+IS ++ +EA+ +
Sbjct: 205 FGSDLYIGNALIDMYCRFNDLDKARKVFEEMP--LRDVVSWNSLISGYNANGYWNEALEI 262
Query: 121 LKEMWVLGLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
LG+ + T SV+ C S +G +H + K+G + ++ + N ++SMY
Sbjct: 263 YYRFRNLGVVPDSYTMSSVLRACGGLGSVEEGDIIHGLIEKIG-IKKDVIVNNGLLSMYC 321
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
KF + + R IFD++ VSW T+I GY VG E+ L +M PDL+ +
Sbjct: 322 KFNGLIDGRRIFDKMVLRDAVSWNTMICGYSQVGLYEESIKLFMEMVN-QFKPDLLTITS 380
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
++ C +G+L +H ++ SGY + N+L++MY KCG+L ++ VF + K
Sbjct: 381 ILQACGHLGDLEFGKYVHDYMITSGYECDTTASNILINMYAKCGNLLASQEVFSGMKCKD 440
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEE 356
W SMI Y Q G EA+ LFK ++KT V+P+ T LS +LG L GKE+
Sbjct: 441 SVSWNSMINVYIQNGSFDEAMKLFK-MMKTDVKPDSVTYVMLLSMSTQLGDLXLGKELHC 499
Query: 357 YIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQ 416
+ G SN V +L+ M++KCG + + +VFE + +D+ W+ +I +
Sbjct: 500 DLAKMGFNSNIVVSNTLVDMYAKCGEMGDSLKVFENMKARDIITWNTIIASCVHSEDCNL 559
Query: 417 ALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCL 476
L + +M+ EG+ PD SIL CS G + G+E + L
Sbjct: 560 GLRMISRMR-TEGVTPDMATMLSILPVCSLLAAKRQGKEIHGCI-FKLGLESDVPVGNVL 617
Query: 477 VDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSAC 512
+++ + G + + M + W L+SAC
Sbjct: 618 IEMYSKCGSLRNSFQVFKLMKTK-DVVTWTALISAC 652
Score = 220 bits (560), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 141/493 (28%), Positives = 246/493 (49%), Gaps = 11/493 (2%)
Query: 33 FPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMP 92
F + +A A+ + ++HS ++ +G LI Y+ D SS V +
Sbjct: 75 FSSISRALASAATTTQLHKLHSLIITLGLHHSVIFSAKLIAKYAHFRDPTSSFSVF-RLA 133
Query: 93 VRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCS----FRQG 148
+V WNSII A + L EA+ + E + L+ TF SV++ C+ F
Sbjct: 134 SPSNNVYXWNSIIRALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINACAGLLDFEMA 193
Query: 149 ISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVN 208
S+H V +G +++ + N+++ MY +F +++AR +F+E+ +VSW ++I GY
Sbjct: 194 KSIHDRVLXMG-FGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNA 252
Query: 209 VGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPL 268
G NEA + + R + V PD +++ C +G++ +H L+ K G + +
Sbjct: 253 NGYWNEALEIYYRFRNLGVVPDSYTMSSVLRACGGLGSVEEGDIIHGLIEKIGIKKDVIV 312
Query: 269 DNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSV 328
+N L+SMY K L RR+FD ++ + W +MI GY+Q+G E++ LF ++
Sbjct: 313 NNGLLSMYCKFNGLIDGRRIFDKMVLRDAVSWNTMICGYSQVGLYEESIKLFMEMV-NQF 371
Query: 329 RPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKE 388
+P+ T+ + L AC LG L GK + +Y++ +G E + LI+M++KCG + ++E
Sbjct: 372 KPDLLTITSILQACGHLGDLEFGKYVHDYMITSGYECDTTASNILINMYAKCGNLLASQE 431
Query: 389 VFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSG 448
VF + KD W++MIN Y +G D+A+ LF M+ +KPD+V Y +LS + G
Sbjct: 432 VFSGMKCKDSVSWNSMINVYIQNGSFDEAMKLFKMMK--TDVKPDSVTYVMLLSMSTQLG 489
Query: 449 MVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPL 508
+ G + + G +I LVD+ + G +LK M W +
Sbjct: 490 DLXLGKELHCDL-AKMGFNSNIVVSNTLVDMYAKCGEMGDSLKVFENMKAR-DIITWNTI 547
Query: 509 LSACMKHHNVELG 521
+++C+ + LG
Sbjct: 548 IASCVHSEDCNLG 560
Score = 156 bits (394), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 100/340 (29%), Positives = 178/340 (52%), Gaps = 10/340 (2%)
Query: 120 VLKEMWVLGLELSASTFVSVVS-----GCSFRQGISMHCCVYKLGLLNNEIPLANSVMSM 174
V+K + VL E S T S +S + Q +H + LGL ++ + + +++
Sbjct: 59 VMKTLRVLH-ECSRQTLFSSISRALASAATTTQLHKLHSLIITLGL-HHSVIFSAKLIAK 116
Query: 175 YAKFGKVNEARSIFDEIGETS-IVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVV 233
YA F + S+F ++ + W +II + G +EA L ++ +R+ + PD
Sbjct: 117 YAHFRDPTSSFSVFRLASPSNNVYXWNSIIRALTHNGLFSEALSLYSETQRIRLQPDTYT 176
Query: 234 FLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVL 293
F ++I CA + + +A S+H +L G+ ++ + N L+ MY + DL+ AR+VF+ +
Sbjct: 177 FPSVINACAGLLDFEMAKSIHDRVLXMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMP 236
Query: 294 EKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKE 353
+ V W S+I GY GY +EA+ ++ R V P+ T+++ L AC LGS+ +G
Sbjct: 237 LRDVVSWNSLISGYNANGYWNEALEIYYRFRNLGVVPDSYTMSSVLRACGGLGSVEEGDI 296
Query: 354 IEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGM 413
I I G++ + V L+ M+ K + + +F+++ +D W+ MI GY+ G+
Sbjct: 297 IHGLIEKIGIKKDVIVNNGLLSMYCKFNGLIDGRRIFDKMVLRDAVSWNTMICGYSQVGL 356
Query: 414 GDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDG 453
++++ LF M+ V KPD + TSIL AC H G ++ G
Sbjct: 357 YEESIKLF--MEMVNQFKPDLLTITSILQACGHLGDLEFG 394
>gi|147841045|emb|CAN68552.1| hypothetical protein VITISV_014227 [Vitis vinifera]
Length = 1309
Score = 354 bits (908), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 178/493 (36%), Positives = 288/493 (58%), Gaps = 3/493 (0%)
Query: 130 ELSASTFVSVVSGC-SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIF 188
L+ ++S + C + Q +H G+L N I +AN ++ Y+ + +++A +F
Sbjct: 59 RLNPKFYISALVNCRNLTQVRQVHAQASVHGMLEN-IVVANKLIYFYSYYRALDDAYGLF 117
Query: 189 DEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLF 248
D + VSW+ ++GG+ VG+ FG ++ R PD +I C + NL
Sbjct: 118 DGMCVRDSVSWSVMVGGFAKVGDYINCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQ 177
Query: 249 LALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYA 308
+ +H ++ K G + + + LV MY KC ++E AR +FD + E+ + WT MIGGYA
Sbjct: 178 MGRLIHHIVYKFGLDLDHFVCAALVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYA 237
Query: 309 QLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQ 368
+ G +E++ LF+++ + V P++ + T + ACA+LG++ K + I++YI + +
Sbjct: 238 ECGKANESLVLFEKMREEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVI 297
Query: 369 VQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVE 428
+ T++I M++KCG + A+E+F+R+ +K++ WSAMI Y HG G +AL+LF M
Sbjct: 298 LGTAMIDMYAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLF-PMMLSS 356
Query: 429 GLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDL 488
G+ PD + S+L ACSH+G+V++GL FF SM ++ + ++HY C+VDLLGRAGR D
Sbjct: 357 GMLPDKITLASLLYACSHAGLVEEGLRFFSSMWEDYSVRTDVKHYTCVVDLLGRAGRLDE 416
Query: 489 ALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTS 548
ALK I M +E +W L AC H +V L E AA +LL L + G+Y+L++N++ +
Sbjct: 417 ALKLIKSMTIEKDEGLWGAFLGACRTHKDVVLAEKAATSLLELQSQNPGHYVLLSNIYAN 476
Query: 549 AGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKELHIK 608
AG W++ A R LM RRL K PGW+ +E+D F GD +H S +I + LK L K
Sbjct: 477 AGRWEDVAKIRDLMSQRRLKKTPGWTWIEVDNKSHQFSVGDTTHPRSKEIYEMLKSLSNK 536
Query: 609 LLEAGYIAEADIV 621
L GY+ + + V
Sbjct: 537 LELVGYVPDTNFV 549
Score = 349 bits (895), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 173/463 (37%), Positives = 274/463 (59%), Gaps = 2/463 (0%)
Query: 159 GLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGL 218
G+L N I +AN ++ Y+ + +++A +FD + VSW+ ++GG+ VG+ FG
Sbjct: 765 GMLQNLI-VANKLVXFYSYYRALDDAYGLFDGMCVRDSVSWSVMVGGFAKVGDYMNCFGT 823
Query: 219 CNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTK 278
++ R PD +I C + NL + +H ++ K G + + + LV MY K
Sbjct: 824 FRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYGK 883
Query: 279 CGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATT 338
C ++E AR +FD + E+ + WT MIGGYA+ G +E++ LF ++ + V P++ + T
Sbjct: 884 CREIEDARFLFDKMXERDLVTWTVMIGGYAECGNANESLVLFDKMREEGVVPDKVAMVTV 943
Query: 339 LSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDL 398
+ ACA+LG++ K + I++YI + + + T++I M +KCG + A+E+F+R+ +K++
Sbjct: 944 VFACAKLGAMHKARTIDDYIQRKKFQLDVILGTAMIDMHAKCGCVESAREIFDRMEEKNV 1003
Query: 399 AVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFK 458
WSAMI Y HG G +AL+LF M G+ P+ + S+L ACSH+G+V++GL FF
Sbjct: 1004 ISWSAMIAAYGYHGQGRKALDLF-PMMLRSGILPNKITLVSLLYACSHAGLVEEGLRFFS 1062
Query: 459 SMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNV 518
M ++ + ++HY C+VDLLGRAGR D ALK I M E +W L AC H +V
Sbjct: 1063 XMWEDYSVRXDVKHYTCVVDLLGRAGRLDEALKLIXSMTXEKDEGLWGAFLGACRTHKDV 1122
Query: 519 ELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEI 578
L E AA +LL L P + G+YIL++N++ +AG W++ A R LM RRL K PGW+ +E+
Sbjct: 1123 XLAEKAATSLLELQPQNPGHYILLSNIYANAGRWEDVAKIRDLMSQRRLKKIPGWTWIEV 1182
Query: 579 DGSVQVFVAGDRSHHLSVDIRKTLKELHIKLLEAGYIAEADIV 621
D F GD +H S +I + LK L KL GY+ + + V
Sbjct: 1183 DNKSHQFSVGDTTHPRSKEIYEMLKSLGNKLELVGYVPDTNFV 1225
Score = 164 bits (416), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 102/372 (27%), Positives = 182/372 (48%), Gaps = 17/372 (4%)
Query: 50 KRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHS 109
++VH G Q+ V L+ YS + + D M V R VSW+ ++ +
Sbjct: 755 RQVHXQASVHGMLQNLIVANKLVXFYSYYRALDDAYGLFDGMCV--RDSVSWSVMVGGFA 812
Query: 110 RACLNDEAILVLKEMWVLGLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEI 165
+ +E+ G T V+ C + + G +H VYK GL +
Sbjct: 813 KVGDYMNCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFGLDLDHF 872
Query: 166 PLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRM 225
A +++ MY K ++ +AR +FD++ E +V+WT +IGGY GN NE+ L ++MR
Sbjct: 873 VCA-ALVDMYGKCREIEDARFLFDKMXERDLVTWTVMIGGYAECGNANESLVLFDKMREE 931
Query: 226 SVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELA 285
V PD V + ++ CA++G + A ++ + + + + L ++ M+ KCG +E A
Sbjct: 932 GVVPDKVAMVTVVFACAKLGAMHKARTIDDYIQRKKFQLDVILGTAMIDMHAKCGCVESA 991
Query: 286 RRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAEL 345
R +FD + EK+V W++MI Y G +A++LF +L++ + PN+ TL + L AC+
Sbjct: 992 REIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLRSGILPNKITLVSLLYACSHA 1051
Query: 346 GSLSKGKEI-----EEYIVLNGLESNRQVQTSLIHMFSKCGRINKA-KEVFERVPDKDLA 399
G + +G E+Y V ++ T ++ + + GR+++A K + +KD
Sbjct: 1052 GLVEEGLRFFSXMWEDYSVRXDVKH----YTCVVDLLGRAGRLDEALKLIXSMTXEKDEG 1107
Query: 400 VWSAMINGYAIH 411
+W A + H
Sbjct: 1108 LWGAFLGACRTH 1119
Score = 161 bits (408), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 103/382 (26%), Positives = 187/382 (48%), Gaps = 20/382 (5%)
Query: 40 CANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVV 99
C N+ + ++VH+ G ++ V LI YS + + D M V R V
Sbjct: 72 CRNLTQV---RQVHAQASVHGMLENIVVANKLIYFYSYYRALDDAYGLFDGMCV--RDSV 126
Query: 100 SWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGC----SFRQGISMHCCV 155
SW+ ++ ++ +E+ G T V+ C + + G +H V
Sbjct: 127 SWSVMVGGFAKVGDYINCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIV 186
Query: 156 YKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEA 215
YK GL + A +++ MY K ++ +AR +FD++ E +V+WT +IGGY G NE+
Sbjct: 187 YKFGLDLDHFVCA-ALVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANES 245
Query: 216 FGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSM 275
L +MR V PD V + ++ CA++G + A + + + + + L ++ M
Sbjct: 246 LVLFEKMREEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDM 305
Query: 276 YTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATL 335
Y KCG +E AR +FD + EK+V W++MI Y G +A++LF +L + + P++ TL
Sbjct: 306 YAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLSSGMLPDKITL 365
Query: 336 ATTLSACAELGSLSKGKEI-----EEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVF 390
A+ L AC+ G + +G E+Y V ++ + T ++ + + GR+++A ++
Sbjct: 366 ASLLYACSHAGLVEEGLRFFSSMWEDYSV----RTDVKHYTCVVDLLGRAGRLDEALKLI 421
Query: 391 ERVP-DKDLAVWSAMINGYAIH 411
+ + +KD +W A + H
Sbjct: 422 KSMTIEKDEGLWGAFLGACRTH 443
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 79/317 (24%), Positives = 154/317 (48%), Gaps = 19/317 (5%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
M+ G + T+ +++ G +++T P V++AC ++ ++ G+ +H V K G
Sbjct: 131 MVGGFAKVGDYINCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFG 190
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
D FV L+DMY KC + +R + D+M + R +V+W +I ++ +E++++
Sbjct: 191 LDLDHFVCAALVDMYVKCREIEDARFLFDKM--QERDLVTWTVMIGGYAECGKANESLVL 248
Query: 121 LKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGLLNN---------EIPLANSV 171
++M G+ V+VV C+ + G +MH K ++++ ++ L ++
Sbjct: 249 FEKMREEGVVPDKVAMVTVVFACA-KLG-AMH----KARIIDDYIQRKKFQLDVILGTAM 302
Query: 172 MSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDL 231
+ MYAK G V AR IFD + E +++SW+ +I Y G +A L M + PD
Sbjct: 303 IDMYAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLSSGMLPDK 362
Query: 232 VVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLD-NLLVSMYTKCGDLELARRVFD 290
+ +L+ C+ G + L S + + D +V + + G L+ A ++
Sbjct: 363 ITLASLLYACSHAGLVEEGLRFFSSMWEDYSVRTDVKHYTCVVDLLGRAGRLDEALKLIK 422
Query: 291 AV-LEKSVFLWTSMIGG 306
++ +EK LW + +G
Sbjct: 423 SMTIEKDEGLWGAFLGA 439
Score = 118 bits (296), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 77/323 (23%), Positives = 148/323 (45%), Gaps = 31/323 (9%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
M+ G + T+ +++ G +++T P V++AC ++ ++ G+ +H V K G
Sbjct: 807 MVGGFAKVGDYMNCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFG 866
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
D FV L+DMY KC + +R + D+M R +V+W +I ++ +E++++
Sbjct: 867 LDLDHFVCAALVDMYGKCREIEDARFLFDKMXE--RDLVTWTVMIGGYAECGNANESLVL 924
Query: 121 LKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGLLNN---------------EI 165
+M G+ V+VV C+ KLG ++ ++
Sbjct: 925 FDKMREEGVVPDKVAMVTVVFACA------------KLGAMHKARTIDDYIQRKKFQLDV 972
Query: 166 PLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRM 225
L +++ M+AK G V AR IFD + E +++SW+ +I Y G +A L M R
Sbjct: 973 ILGTAMIDMHAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLRS 1032
Query: 226 SVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLD-NLLVSMYTKCGDLEL 284
+ P+ + ++L+ C+ G + L S + + D +V + + G L+
Sbjct: 1033 GILPNKITLVSLLYACSHAGLVEEGLRFFSXMWEDYSVRXDVKHYTCVVDLLGRAGRLDE 1092
Query: 285 ARRVFDAV-LEKSVFLWTSMIGG 306
A ++ ++ EK LW + +G
Sbjct: 1093 ALKLIXSMTXEKDEGLWGAFLGA 1115
Score = 40.0 bits (92), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 30/138 (21%), Positives = 64/138 (46%), Gaps = 6/138 (4%)
Query: 347 SLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMIN 406
+L++ +++ ++G+ N V L+ +S ++ A +F+ + +D WS M+
Sbjct: 750 NLTQVRQVHXQASVHGMLQNLIVANKLVXFYSYYRALDDAYGLFDGMCVRDSVSWSVMVG 809
Query: 407 GYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGI 466
G+A G F ++ G +PD ++ AC + G + FG+
Sbjct: 810 GFAKVGDYMNCFGTFRELIRC-GARPDNYTLPFVIRACRDLKNLQMG-RLIHHIVYKFGL 867
Query: 467 EPSIEHYLC--LVDLLGR 482
+ ++H++C LVD+ G+
Sbjct: 868 D--LDHFVCAALVDMYGK 883
>gi|145332693|ref|NP_001078212.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274431|sp|Q9LW32.1|PP258_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g26782, mitochondrial; Flags: Precursor
gi|9279668|dbj|BAB01225.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332643694|gb|AEE77215.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 659
Score = 353 bits (907), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 195/532 (36%), Positives = 313/532 (58%), Gaps = 15/532 (2%)
Query: 98 VVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCS----FRQGISMHC 153
V SWNS+I+ +R+ + EA+L M L L + S+F + CS G H
Sbjct: 41 VFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSGKQTHQ 100
Query: 154 CVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVN 213
+ G ++I ++++++ MY+ GK+ +AR +FDEI + +IVSWT++I GY GN
Sbjct: 101 QAFVFGY-QSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNAL 159
Query: 214 EAFGLCNQMRRMSVTPDLVVFLN------LILGCAQVGNLFLALSMHSLLLKSGYNNEDP 267
+A L + D +FL+ +I C++V L S+HS ++K G++
Sbjct: 160 DAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGVS 219
Query: 268 LDNLLVSMYTKCGD--LELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLK 325
+ N L+ Y K G+ + +AR++FD +++K + S++ YAQ G +EA +F+RL+K
Sbjct: 220 VGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVK 279
Query: 326 TSVRP-NEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRIN 384
V N TL+T L A + G+L GK I + ++ GLE + V TS+I M+ KCGR+
Sbjct: 280 NKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVE 339
Query: 385 KAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSAC 444
A++ F+R+ +K++ W+AMI GY +HG +AL LF M G++P+ + + S+L+AC
Sbjct: 340 TARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMID-SGVRPNYITFVSVLAAC 398
Query: 445 SHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQV 504
SH+G+ +G +F +M+ FG+EP +EHY C+VDLLGRAG A I M ++ + +
Sbjct: 399 SHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDSII 458
Query: 505 WAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDD 564
W+ LL+AC H NVEL E + L L+ + G Y+L+++++ AG WK+ R +M +
Sbjct: 459 WSSLLAACRIHKNVELAEISVARLFELDSSNCGYYMLLSHIYADAGRWKDVERVRMIMKN 518
Query: 565 RRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKELHIKLLEAGYIA 616
R L K PG+S +E++G V VF+ GD H I + L EL+ KLLEAGY++
Sbjct: 519 RGLVKPPGFSLLELNGEVHVFLIGDEEHPQREKIYEFLAELNRKLLEAGYVS 570
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 129/431 (29%), Positives = 224/431 (51%), Gaps = 28/431 (6%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+I + +G E L +SSM + ++ +FP +KAC+++ I+ GK+ H G
Sbjct: 47 VIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSGKQTHQQAFVFG 106
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+Q D FV + LI MYS C +RKV DE+P R++VSW S+I + +A+ +
Sbjct: 107 YQSDIFVSSALIVMYSTCGKLEDARKVFDEIP--KRNIVSWTSMIRGYDLNGNALDAVSL 164
Query: 121 LKEMWV------LGLELSASTFVSVVSGCSF--RQGI--SMHCCVYKLGLLNNEIPLANS 170
K++ V + L + VSV+S CS +G+ S+H V K G + + + N+
Sbjct: 165 FKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRG-FDRGVSVGNT 223
Query: 171 VMSMYAKFGK--VNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQM-RRMSV 227
++ YAK G+ V AR IFD+I + VS+ +I+ Y G NEAF + ++ + V
Sbjct: 224 LLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVV 283
Query: 228 TPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARR 287
T + + ++L + G L + +H +++ G ++ + ++ MY KCG +E AR+
Sbjct: 284 TFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARK 343
Query: 288 VFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGS 347
FD + K+V WT+MI GY G+ ++A+ LF ++ + VRPN T + L+AC+
Sbjct: 344 AFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSH--- 400
Query: 348 LSKGKEIEEYIVLNGLESNRQVQTSLIH------MFSKCGRINKAKEVFERVPDK-DLAV 400
G +E + N ++ V+ L H + + G + KA ++ +R+ K D +
Sbjct: 401 --AGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDSII 458
Query: 401 WSAMINGYAIH 411
WS+++ IH
Sbjct: 459 WSSLLAACRIH 469
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 101/401 (25%), Positives = 193/401 (48%), Gaps = 32/401 (7%)
Query: 191 IGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLA 250
+ +T + SW ++I G+ EA + MR++S+ P F I C+ + ++F
Sbjct: 36 VDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSG 95
Query: 251 LSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQL 310
H GY ++ + + L+ MY+ CG LE AR+VFD + ++++ WTSMI GY
Sbjct: 96 KQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLN 155
Query: 311 GYPSEAVNLFKRLLKTSVRPNEAT------LATTLSACAELGSLSKGKEIEEYIVLNGLE 364
G +AV+LFK LL ++A L + +SAC+ + + + I +++ G +
Sbjct: 156 GNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFD 215
Query: 365 SNRQVQTSLIHMFSKCGR--INKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFY 422
V +L+ ++K G + A+++F+++ DKD ++++++ YA GM ++A +F
Sbjct: 216 RGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFR 275
Query: 423 KMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGR 482
++ + + +A+ +++L A SHSG + G + G+E + ++D+ +
Sbjct: 276 RLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQV-IRMGLEDDVIVGTSIIDMYCK 334
Query: 483 AGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNL----LTLNPGSTGN 538
GR + A K M + + W +++ H +AAK L ++ G N
Sbjct: 335 CGRVETARKAFDRMKNK-NVRSWTAMIAGYGMH------GHAAKALELFPAMIDSGVRPN 387
Query: 539 YILMANLFTS---AGM----WKEAATARGLMDDRRLTKEPG 572
YI ++ + AG+ W+ +G R EPG
Sbjct: 388 YITFVSVLAACSHAGLHVEGWRWFNAMKG-----RFGVEPG 423
>gi|110736949|dbj|BAF00431.1| hypothetical protein [Arabidopsis thaliana]
Length = 659
Score = 353 bits (907), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 195/532 (36%), Positives = 312/532 (58%), Gaps = 15/532 (2%)
Query: 98 VVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCS----FRQGISMHC 153
V SWNS+I+ +R+ + EA+L M L L + S+F + CS G H
Sbjct: 41 VFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSGKQTHQ 100
Query: 154 CVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVN 213
+ G ++I ++++++ MY+ GK+ +AR +FDEI + IVSWT++I GY GN
Sbjct: 101 QAFVFGY-QSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRDIVSWTSMIRGYDLNGNAL 159
Query: 214 EAFGLCNQMRRMSVTPDLVVFLN------LILGCAQVGNLFLALSMHSLLLKSGYNNEDP 267
+A L + D +FL+ +I C++V L S+HS ++K G++
Sbjct: 160 DAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGVS 219
Query: 268 LDNLLVSMYTKCGD--LELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLK 325
+ N L+ Y K G+ + +AR++FD +++K + S++ YAQ G +EA +F+RL+K
Sbjct: 220 VGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVK 279
Query: 326 TSVRP-NEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRIN 384
V N TL+T L A + G+L GK I + ++ GLE + V TS+I M+ KCGR+
Sbjct: 280 NKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVE 339
Query: 385 KAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSAC 444
A++ F+R+ +K++ W+AMI GY +HG +AL LF M G++P+ + + S+L+AC
Sbjct: 340 TARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMID-SGVRPNYITFVSVLAAC 398
Query: 445 SHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQV 504
SH+G+ +G +F +M+ FG+EP +EHY C+VDLLGRAG A I M ++ + +
Sbjct: 399 SHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDSII 458
Query: 505 WAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDD 564
W+ LL+AC H NVEL E + L L+ + G Y+L+++++ AG WK+ R +M +
Sbjct: 459 WSSLLAACRIHKNVELAEISVARLFELDSSNCGYYMLLSHIYADAGRWKDVERVRMIMKN 518
Query: 565 RRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKELHIKLLEAGYIA 616
R L K PG+S +E++G V VF+ GD H I + L EL+ KLLEAGY++
Sbjct: 519 RGLVKPPGFSLLELNGEVHVFLIGDEEHPQREKIYEFLAELNRKLLEAGYVS 570
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 129/431 (29%), Positives = 223/431 (51%), Gaps = 28/431 (6%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+I + +G E L +SSM + ++ +FP +KAC+++ I+ GK+ H G
Sbjct: 47 VIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSGKQTHQQAFVFG 106
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+Q D FV + LI MYS C +RKV DE+P R +VSW S+I + +A+ +
Sbjct: 107 YQSDIFVSSALIVMYSTCGKLEDARKVFDEIP--KRDIVSWTSMIRGYDLNGNALDAVSL 164
Query: 121 LKEMWV------LGLELSASTFVSVVSGCSF--RQGI--SMHCCVYKLGLLNNEIPLANS 170
K++ V + L + VSV+S CS +G+ S+H V K G + + + N+
Sbjct: 165 FKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRG-FDRGVSVGNT 223
Query: 171 VMSMYAKFGK--VNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQM-RRMSV 227
++ YAK G+ V AR IFD+I + VS+ +I+ Y G NEAF + ++ + V
Sbjct: 224 LLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVV 283
Query: 228 TPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARR 287
T + + ++L + G L + +H +++ G ++ + ++ MY KCG +E AR+
Sbjct: 284 TFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARK 343
Query: 288 VFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGS 347
FD + K+V WT+MI GY G+ ++A+ LF ++ + VRPN T + L+AC+
Sbjct: 344 AFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSH--- 400
Query: 348 LSKGKEIEEYIVLNGLESNRQVQTSLIH------MFSKCGRINKAKEVFERVPDK-DLAV 400
G +E + N ++ V+ L H + + G + KA ++ +R+ K D +
Sbjct: 401 --AGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDSII 458
Query: 401 WSAMINGYAIH 411
WS+++ IH
Sbjct: 459 WSSLLAACRIH 469
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 101/401 (25%), Positives = 192/401 (47%), Gaps = 32/401 (7%)
Query: 191 IGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLA 250
+ +T + SW ++I G+ EA + MR++S+ P F I C+ + ++F
Sbjct: 36 VDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSG 95
Query: 251 LSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQL 310
H GY ++ + + L+ MY+ CG LE AR+VFD + ++ + WTSMI GY
Sbjct: 96 KQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRDIVSWTSMIRGYDLN 155
Query: 311 GYPSEAVNLFKRLLKTSVRPNEAT------LATTLSACAELGSLSKGKEIEEYIVLNGLE 364
G +AV+LFK LL ++A L + +SAC+ + + + I +++ G +
Sbjct: 156 GNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFD 215
Query: 365 SNRQVQTSLIHMFSKCGR--INKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFY 422
V +L+ ++K G + A+++F+++ DKD ++++++ YA GM ++A +F
Sbjct: 216 RGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFR 275
Query: 423 KMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGR 482
++ + + +A+ +++L A SHSG + G + G+E + ++D+ +
Sbjct: 276 RLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQV-IRMGLEDDVIVGTSIIDMYCK 334
Query: 483 AGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNL----LTLNPGSTGN 538
GR + A K M + + W +++ H +AAK L ++ G N
Sbjct: 335 CGRVETARKAFDRMKNK-NVRSWTAMIAGYGMH------GHAAKALELFPAMIDSGVRPN 387
Query: 539 YILMANLFTS---AGM----WKEAATARGLMDDRRLTKEPG 572
YI ++ + AG+ W+ +G R EPG
Sbjct: 388 YITFVSVLAACSHAGLHVEGWRWFNAMKG-----RFGVEPG 423
>gi|302773622|ref|XP_002970228.1| hypothetical protein SELMODRAFT_93321 [Selaginella moellendorffii]
gi|300161744|gb|EFJ28358.1| hypothetical protein SELMODRAFT_93321 [Selaginella moellendorffii]
Length = 936
Score = 353 bits (907), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 194/614 (31%), Positives = 340/614 (55%), Gaps = 10/614 (1%)
Query: 13 ETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLI 72
E + M Q G + TF +L AC N ++ GK V + + F+ D FV T LI
Sbjct: 244 EAFFIFQRMQQEGERCDRVTFLSILDACVNPETLQHGKHVRESISETSFELDLFVGTALI 303
Query: 73 DMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELS 132
MY++C + +V M + ++++W++II+A + EA+ + M G+ +
Sbjct: 304 TMYARCRSPEDAAQVFGRM--KQTNLITWSAIITAFADHGHCGEALRYFRMMQQEGILPN 361
Query: 133 ASTFVSVVSGCSFRQGIS----MHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIF 188
TF+S+++G + G+ +H + + GL ++ + N+++++Y + ++AR++F
Sbjct: 362 RVTFISLLNGFTTPSGLEELSRIHLLITEHGL-DDTTTMRNALVNVYGRCESPDDARTVF 420
Query: 189 DEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLF 248
D++ +++SW ++IG YV ++A L M++ + PD V F+ ILG +G+
Sbjct: 421 DQLELPNLISWNSMIGIYVQCERHDDALQLFRTMQQQGIQPDRVNFMT-ILGACTIGSHG 479
Query: 249 LALSM-HSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGY 307
+ H + +SG + LV+MY K G+L++A + + E+ + W +I GY
Sbjct: 480 RTRKLVHQCVEESGLGGSPLVQTSLVNMYAKAGELDVAEVILQEMDEQQITAWNVLINGY 539
Query: 308 AQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNR 367
A G EA+ +++L ++ ++ T + L+AC SL++GK I V GL+S+
Sbjct: 540 ALHGRSREALEAYQKLQLEAIPVDKVTFISVLNACTSSTSLAEGKMIHSNAVECGLDSDV 599
Query: 368 QVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHV 427
V+ +L +M+SKCG + A+ +F+ +P + W+ M+ YA HG ++ L L KM+
Sbjct: 600 IVKNALTNMYSKCGSMENARRIFDSMPIRSAVSWNGMLQAYAQHGESEEVLKLIRKMEQ- 658
Query: 428 EGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFD 487
EG+K + + + S+LS+CSH+G++ +G +F S+ + GIE EHY CLVDLLGRAG+
Sbjct: 659 EGVKLNGITFVSVLSSCSHAGLIAEGCQYFHSLGHDRGIEVKTEHYGCLVDLLGRAGKLQ 718
Query: 488 LALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFT 547
A K I +MP+E WA LL AC +++ G+ AA LL L+PG++ ++++N+++
Sbjct: 719 EAEKYISKMPLEPGIVTWASLLGACRVQKDLDRGKLAAGKLLELDPGNSSASVVLSNIYS 778
Query: 548 SAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKELHI 607
G WK AA R M RR+ K PG S +++ V F D SH + +I ++EL
Sbjct: 779 ERGDWKNAAKLRRAMASRRVKKVPGISSIQVKNKVHEFRVRDTSHPRAAEIYDKVEELCF 838
Query: 608 KLLEAGYIAEADIV 621
+ EAGY+ + +V
Sbjct: 839 AMREAGYVPDTKMV 852
Score = 206 bits (525), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 149/556 (26%), Positives = 276/556 (49%), Gaps = 14/556 (2%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI ++ SF+E L+ + +ML GV N+ T VL +C + + DG VH+ L+ G
Sbjct: 29 MISAYSSYKSFQEALALFHAMLLEGVAPNAITLVAVLNSCGSFRELRDGILVHALSLERG 88
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHS-RACLNDEAIL 119
F Q+ V T L++MY KC + ++ V +EM + +VV+WN+++ +S + C A+
Sbjct: 89 FFQNTLVATALLNMYGKCGTLLDAQSVFEEMAEK--NVVTWNAMLGVYSLQGCCWKLAVE 146
Query: 120 VLKEMWVLGLELSASTFV----SVVSGCSFRQGISMHCCVYKLGLLNNEIPLANSVMSMY 175
+ M + G++ + TF+ SVV + R+G +H CV + + ++ + ++++ Y
Sbjct: 147 LFTRMLLEGVKANVITFLNVLNSVVDPDALRKGKFIHSCV-RESEHSLDVFVNTALVNTY 205
Query: 176 AKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFL 235
K G + +AR +FD + S+ +W ++I Y EAF + +M++ D V FL
Sbjct: 206 TKCGSLTDARKVFDGMPCRSVGTWNSMISAYSISERSGEAFFIFQRMQQEGERCDRVTFL 265
Query: 236 NLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEK 295
+++ C L + + ++ + + + L++MY +C E A +VF + +
Sbjct: 266 SILDACVNPETLQHGKHVRESISETSFELDLFVGTALITMYARCRSPEDAAQVFGRMKQT 325
Query: 296 SVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIE 355
++ W+++I +A G+ EA+ F+ + + + PN T + L+ L + I
Sbjct: 326 NLITWSAIITAFADHGHCGEALRYFRMMQQEGILPNRVTFISLLNGFTTPSGLEELSRIH 385
Query: 356 EYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGD 415
I +GL+ ++ +L++++ +C + A+ VF+++ +L W++MI Y D
Sbjct: 386 LLITEHGLDDTTTMRNALVNVYGRCESPDDARTVFDQLELPNLISWNSMIGIYVQCERHD 445
Query: 416 QALNLFYKMQHVEGLKPDAVVYTSILSACS-HSGMVDDGLSFFKSMQSNFGIEPSIEHYL 474
AL LF MQ +G++PD V + +IL AC+ S L +S G P ++
Sbjct: 446 DALQLFRTMQQ-QGIQPDRVNFMTILGACTIGSHGRTRKLVHQCVEESGLGGSPLVQ--T 502
Query: 475 CLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKH-HNVELGEYAAKNLLTLNP 533
LV++ +AG D+A + EM E Q W L++ H + E E K L P
Sbjct: 503 SLVNMYAKAGELDVAEVILQEMD-EQQITAWNVLINGYALHGRSREALEAYQKLQLEAIP 561
Query: 534 GSTGNYILMANLFTSA 549
+I + N TS+
Sbjct: 562 VDKVTFISVLNACTSS 577
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 135/451 (29%), Positives = 230/451 (50%), Gaps = 12/451 (2%)
Query: 74 MYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSA 133
MYS+C + + +R R+VVSWN +ISA+S EA+ + M + G+ +A
Sbjct: 1 MYSRCGSLGDAVAAFGK--IRARNVVSWNVMISAYSSYKSFQEALALFHAMLLEGVAPNA 58
Query: 134 STFVSVVSGC-SFRQ---GISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFD 189
T V+V++ C SFR+ GI +H + G N + +A ++++MY K G + +A+S+F+
Sbjct: 59 ITLVAVLNSCGSFRELRDGILVHALSLERGFFQNTL-VATALLNMYGKCGTLLDAQSVFE 117
Query: 190 EIGETSIVSWTTIIGGYVNVGNVNE-AFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLF 248
E+ E ++V+W ++G Y G + A L +M V +++ FLN++ L
Sbjct: 118 EMAEKNVVTWNAMLGVYSLQGCCWKLAVELFTRMLLEGVKANVITFLNVLNSVVDPDALR 177
Query: 249 LALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYA 308
+HS + +S ++ + ++ LV+ YTKCG L AR+VFD + +SV W SMI Y+
Sbjct: 178 KGKFIHSCVRESEHSLDVFVNTALVNTYTKCGSLTDARKVFDGMPCRSVGTWNSMISAYS 237
Query: 309 QLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQ 368
EA +F+R+ + R + T + L AC +L GK + E I E +
Sbjct: 238 ISERSGEAFFIFQRMQQEGERCDRVTFLSILDACVNPETLQHGKHVRESISETSFELDLF 297
Query: 369 VQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVE 428
V T+LI M+++C A +VF R+ +L WSA+I +A HG +AL F MQ E
Sbjct: 298 VGTALITMYARCRSPEDAAQVFGRMKQTNLITWSAIITAFADHGHCGEALRYFRMMQQ-E 356
Query: 429 GLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDL 488
G+ P+ V + S+L+ + +++ LS + + G++ + LV++ GR D
Sbjct: 357 GILPNRVTFISLLNGFTTPSGLEE-LSRIHLLITEHGLDDTTTMRNALVNVYGRCESPDD 415
Query: 489 ALKTIH--EMPVEVQAQVWAPLLSACMKHHN 517
A E+P + + C +H +
Sbjct: 416 ARTVFDQLELPNLISWNSMIGIYVQCERHDD 446
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 111/204 (54%), Gaps = 9/204 (4%)
Query: 8 NGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFV 67
+G E L Y + + + TF VL AC + S+ +GK +HS+ ++ G D V
Sbjct: 542 HGRSREALEAYQKLQLEAIPVDKVTFISVLNACTSSTSLAEGKMIHSNAVECGLDSDVIV 601
Query: 68 QTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVL 127
+ L +MYSKC ++R++ D MP+ RS VSWN ++ A+++ ++E + ++++M
Sbjct: 602 KNALTNMYSKCGSMENARRIFDSMPI--RSAVSWNGMLQAYAQHGESEEVLKLIRKMEQE 659
Query: 128 GLELSASTFVSVVSGCSFRQGISMHCCVYKLGLLNN---EIPLAN--SVMSMYAKFGKVN 182
G++L+ TFVSV+S CS G+ C Y L ++ E+ + ++ + + GK+
Sbjct: 660 GVKLNGITFVSVLSSCS-HAGLIAEGCQYFHSLGHDRGIEVKTEHYGCLVDLLGRAGKLQ 718
Query: 183 EARSIFDEIG-ETSIVSWTTIIGG 205
EA ++ E IV+W +++G
Sbjct: 719 EAEKYISKMPLEPGIVTWASLLGA 742
>gi|297742828|emb|CBI35582.3| unnamed protein product [Vitis vinifera]
Length = 638
Score = 353 bits (907), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 202/589 (34%), Positives = 329/589 (55%), Gaps = 11/589 (1%)
Query: 15 LSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDM 74
L Y+ M++ GV + TFP VLKACA+ + G+ VH V+K+GF+ D FV L+
Sbjct: 26 LEVYNQMVRIGVRPDDHTFPFVLKACADAFEVRKGREVHGSVVKLGFESDVFVGNTLLSF 85
Query: 75 YSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHS-RACLNDEAILVLKEMWVLGLE--- 130
Y C + +V DEMP + +VSWN++I S +A+ + + M GL+
Sbjct: 86 YGNCGGLRDAGRVFDEMPEK--DLVSWNTMIGVFSVNGWHYRDALDMFRLMIDEGLKPNS 143
Query: 131 LSASTFVSVVSGCSF-RQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFD 189
++ S+F+ V+ F + G +H ++GL ++I +ANS++ MYAK G EA ++F
Sbjct: 144 ITISSFLPVLVELEFFKAGREVHGSSIRMGL-ESDIFIANSLIDMYAKSGHSTEASNVFY 202
Query: 190 EIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFL 249
++ ++VSW +I + A GL QM+ P+ V F N++ CA++G +
Sbjct: 203 KLDAKNVVSWNAMIANFAQNRFELVAVGLVRQMQDYGELPNSVTFTNVLPACARMGLVRP 262
Query: 250 ALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQ 309
+H+ + G + + N L MY K G L+LAR VFD L V + +I G++Q
Sbjct: 263 GKEIHARSIHMGCAFDLFVSNALTDMYAKSGHLKLARNVFDTSLRDEV-SYNILIVGHSQ 321
Query: 310 LGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQV 369
SE+++LF + ++ + + LSACA L ++ +GKEI +++ + V
Sbjct: 322 TSDCSESLSLFSEMQLMGLKQDNVSFMGALSACANLTAIKQGKEIHGFLLRKLFHIHLFV 381
Query: 370 QTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEG 429
SL+ ++KCGRI A+ +F+R+ +KD+A W+ MI GY + G D A++LF M+ +
Sbjct: 382 ANSLLDFYTKCGRIGLARNIFDRMTNKDVASWNTMILGYGMLGELDTAIDLFENMRK-DD 440
Query: 430 LKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLA 489
++ D+V + ++LSACSH G+++ G +F +++ GIEP+ HY C+VDLLGRAG + A
Sbjct: 441 VEYDSVSFIAVLSACSHGGLLEKGRKYFDELKAR-GIEPTQMHYACMVDLLGRAGLMEEA 499
Query: 490 LKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSA 549
+ I +P+ A +W LL AC + N+EL +AA++L L P +G Y L++N++
Sbjct: 500 AELIKGLPIVPDANIWGALLGACRIYGNLELAAWAAEHLFELKPEHSGYYTLLSNMYAET 559
Query: 550 GMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDI 598
G W EA R LM R + K PG S V+I FV G++ L + +
Sbjct: 560 GRWDEANRIRELMKSRGVKKSPGCSWVQIGEQAHAFVVGEKIEGLDLGL 608
Score = 182 bits (461), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 120/446 (26%), Positives = 222/446 (49%), Gaps = 18/446 (4%)
Query: 5 STNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQD 64
S N + + L + M+ G+ NS T L + G+ VH +++G + D
Sbjct: 118 SVNGWHYRDALDMFRLMIDEGLKPNSITISSFLPVLVELEFFKAGREVHGSSIRMGLESD 177
Query: 65 AFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEM 124
F+ LIDMY+K + V ++ ++VVSWN++I+ ++ A+ ++++M
Sbjct: 178 IFIANSLIDMYAKSGHSTEASNVFYKLDA--KNVVSWNAMIANFAQNRFELVAVGLVRQM 235
Query: 125 WVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGK 180
G ++ TF +V+ C+ R G +H +G ++ ++N++ MYAK G
Sbjct: 236 QDYGELPNSVTFTNVLPACARMGLVRPGKEIHARSIHMGCA-FDLFVSNALTDMYAKSGH 294
Query: 181 VNEARSIFDEIGETSI---VSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNL 237
+ AR++FD TS+ VS+ +I G+ + +E+ L ++M+ M + D V F+
Sbjct: 295 LKLARNVFD----TSLRDEVSYNILIVGHSQTSDCSESLSLFSEMQLMGLKQDNVSFMGA 350
Query: 238 ILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSV 297
+ CA + + +H LL+ ++ + N L+ YTKCG + LAR +FD + K V
Sbjct: 351 LSACANLTAIKQGKEIHGFLLRKLFHIHLFVANSLLDFYTKCGRIGLARNIFDRMTNKDV 410
Query: 298 FLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEY 357
W +MI GY LG A++LF+ + K V + + LSAC+ G L KG++ +
Sbjct: 411 ASWNTMILGYGMLGELDTAIDLFENMRKDDVEYDSVSFIAVLSACSHGGLLEKGRKYFDE 470
Query: 358 IVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPD-KDLAVWSAMINGYAIHGMGDQ 416
+ G+E + ++ + + G + +A E+ + +P D +W A++ I+G +
Sbjct: 471 LKARGIEPTQMHYACMVDLLGRAGLMEEAAELIKGLPIVPDANIWGALLGACRIYGNLEL 530
Query: 417 ALNLFYKMQHVEGLKPDAVVYTSILS 442
A + +H+ LKP+ Y ++LS
Sbjct: 531 AA---WAAEHLFELKPEHSGYYTLLS 553
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 88/299 (29%), Positives = 155/299 (51%), Gaps = 6/299 (2%)
Query: 193 ETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALS 252
T+ W T+I GY ++ V + NQM R+ V PD F ++ CA +
Sbjct: 4 RTTAFLWNTLIRGY-SIAGVGGGLEVYNQMVRIGVRPDDHTFPFVLKACADAFEVRKGRE 62
Query: 253 MHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGY 312
+H ++K G+ ++ + N L+S Y CG L A RVFD + EK + W +MIG ++ G+
Sbjct: 63 VHGSVVKLGFESDVFVGNTLLSFYGNCGGLRDAGRVFDEMPEKDLVSWNTMIGVFSVNGW 122
Query: 313 P-SEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQT 371
+A+++F+ ++ ++PN T+++ L EL G+E+ + GLES+ +
Sbjct: 123 HYRDALDMFRLMIDEGLKPNSITISSFLPVLVELEFFKAGREVHGSSIRMGLESDIFIAN 182
Query: 372 SLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLK 431
SLI M++K G +A VF ++ K++ W+AMI +A + A+ L +MQ G
Sbjct: 183 SLIDMYAKSGHSTEASNVFYKLDAKNVVSWNAMIANFAQNRFELVAVGLVRQMQDY-GEL 241
Query: 432 PDAVVYTSILSACSHSGMVDDGLSFF-KSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLA 489
P++V +T++L AC+ G+V G +S+ + + + L D+ ++G LA
Sbjct: 242 PNSVTFTNVLPACARMGLVRPGKEIHARSIHMGCAFDLFVSN--ALTDMYAKSGHLKLA 298
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 110/407 (27%), Positives = 179/407 (43%), Gaps = 18/407 (4%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI N N + M G NS TF VL ACA + + GK +H+ + +G
Sbjct: 215 MIANFAQNRFELVAVGLVRQMQDYGELPNSVTFTNVLPACARMGLVRPGKEIHARSIHMG 274
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
D FV L DMY+K +R V D LR VS+N +I HS+ E++ +
Sbjct: 275 CAFDLFVSNALTDMYAKSGHLKLARNVFD---TSLRDEVSYNILIVGHSQTSDCSESLSL 331
Query: 121 LKEMWVLGLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
EM ++GL+ +F+ +S C + +QG +H + + L + + +ANS++ Y
Sbjct: 332 FSEMQLMGLKQDNVSFMGALSACANLTAIKQGKEIHGFLLR-KLFHIHLFVANSLLDFYT 390
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K G++ AR+IFD + + SW T+I GY +G ++ A L MR+ V D V F+
Sbjct: 391 KCGRIGLARNIFDRMTNKDVASWNTMILGYGMLGELDTAIDLFENMRKDDVEYDSVSFIA 450
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAV-LEK 295
++ C+ G L L G +V + + G +E A + + +
Sbjct: 451 VLSACSHGGLLEKGRKYFDELKARGIEPTQMHYACMVDLLGRAGLMEEAAELIKGLPIVP 510
Query: 296 SVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLS-ACAELGSLSKGKEI 354
+W +++G G A + L + ++P + T LS AE G + I
Sbjct: 511 DANIWGALLGACRIYGNLELAAWAAEHLFE--LKPEHSGYYTLLSNMYAETGRWDEANRI 568
Query: 355 EEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVW 401
E L +R V+ S + + G A V E++ DL +W
Sbjct: 569 RE------LMKSRGVKKSPGCSWVQIGEQAHAFVVGEKIEGLDLGLW 609
>gi|449485565|ref|XP_004157209.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 953
Score = 353 bits (906), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 208/647 (32%), Positives = 337/647 (52%), Gaps = 72/647 (11%)
Query: 6 TNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDA 65
TN+ F TL Y SML + +++T+PL+++AC+ S W+ K+VH+HVLK+GF D
Sbjct: 191 TNSPHFAFTL--YKSMLSNYLGADNYTYPLLIQACSIRRSEWEAKQVHNHVLKLGFDSDV 248
Query: 66 FVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMW 125
+V+ LI+ +S CS+ + +V +E V VSWNSI++ + +EA + +M
Sbjct: 249 YVRNTLINCFSVCSNMTDACRVFNESSVL--DSVSWNSILAGYIEIGNVEEAKHIYHQM- 305
Query: 126 VLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEAR 185
I +NS++ ++ G V EA
Sbjct: 306 -----------------------------------PERSIIASNSMIVLFGMRGLVVEAC 330
Query: 186 SIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVG 245
+FDE+ E +V+W+ +I + EA M ++ V D VV ++ + CA +
Sbjct: 331 KLFDEMLEKDMVTWSALIACFQQNEMYEEAIRTFVGMHKIGVMVDEVVAVSALSACANLL 390
Query: 246 NLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARR------------------ 287
+ + +HSL LK G + L N L+ MY+KCGD+ +AR+
Sbjct: 391 VVNMGKLIHSLSLKIGTESYINLQNALIYMYSKCGDIMVARKLFDEAYLLDLISWNSMIS 450
Query: 288 -------------VFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEAT 334
+FD++ EK V W+SMI GYAQ E + LF+ + + +P+E T
Sbjct: 451 GYLKCNLVDNAKAIFDSMPEKDVVSWSSMISGYAQNDLFDETLALFQEMQMSGFKPDETT 510
Query: 335 LATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVP 394
L + +SACA L +L +GK + YI NGL N + T+LI M+ KCG + A EVF +
Sbjct: 511 LVSVISACARLAALEQGKWVHAYIKRNGLTINVILGTTLIDMYMKCGCVETALEVFYGMI 570
Query: 395 DKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGL 454
+K ++ W+A+I G A++G+ + +L++F M+ + P+ + + +L AC H G+VD+G
Sbjct: 571 EKGISTWNALILGLAMNGLVESSLDMFSNMKKCH-VTPNEITFMGVLGACRHMGLVDEGQ 629
Query: 455 SFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMK 514
F SM + I+P+++HY C+VDLLGRAG+ A + ++ MP+ W LL AC K
Sbjct: 630 HHFYSMIHDHKIQPNVKHYGCMVDLLGRAGKLQEAEELLNRMPMTPDVATWGALLGACKK 689
Query: 515 HHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWS 574
H + E+G + L+ L P G ++L++N++ S G W + RG+M R+ K PG S
Sbjct: 690 HGDSEMGRRVGRKLIELQPDHDGFHVLLSNIYASKGKWDDVLEIRGMMTKHRVLKIPGCS 749
Query: 575 QVEIDGSVQVFVAGDRSHHLSVDIRKTLKELHIKLLEAGYIAEADIV 621
+E +G + F+AGD++H I L E+ +KL GY + + V
Sbjct: 750 MIEANGVIHEFLAGDKTHPDMDAIEDMLVEMAMKLKLEGYTPDINEV 796
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 94/398 (23%), Positives = 164/398 (41%), Gaps = 96/398 (24%)
Query: 205 GYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNN 264
Y+ + + AF L M + D + LI C+ + + A +H+ +LK G+++
Sbjct: 187 AYIQTNSPHFAFTLYKSMLSNYLGADNYTYPLLIQACSIRRSEWEAKQVHNHVLKLGFDS 246
Query: 265 EDPLDNLLVSMYTKC-------------------------------GDLELARRVFDAVL 293
+ + N L++ ++ C G++E A+ ++ +
Sbjct: 247 DVYVRNTLINCFSVCSNMTDACRVFNESSVLDSVSWNSILAGYIEIGNVEEAKHIYHQMP 306
Query: 294 EKSVFLWTSMIGGYAQLGYPSEAVNLFKRLL----------------------------- 324
E+S+ SMI + G EA LF +L
Sbjct: 307 ERSIIASNSMIVLFGMRGLVVEACKLFDEMLEKDMVTWSALIACFQQNEMYEEAIRTFVG 366
Query: 325 --KTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGR 382
K V +E + LSACA L ++ GK I + G ES +Q +LI+M+SKCG
Sbjct: 367 MHKIGVMVDEVVAVSALSACANLLVVNMGKLIHSLSLKIGTESYINLQNALIYMYSKCGD 426
Query: 383 I-------------------------------NKAKEVFERVPDKDLAVWSAMINGYAIH 411
I + AK +F+ +P+KD+ WS+MI+GYA +
Sbjct: 427 IMVARKLFDEAYLLDLISWNSMISGYLKCNLVDNAKAIFDSMPEKDVVSWSSMISGYAQN 486
Query: 412 GMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIE 471
+ D+ L LF +MQ + G KPD S++SAC+ ++ G ++ N G+ ++
Sbjct: 487 DLFDETLALFQEMQ-MSGFKPDETTLVSVISACARLAALEQGKWVHAYIKRN-GLTINVI 544
Query: 472 HYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLL 509
L+D+ + G + AL+ + M +E W L+
Sbjct: 545 LGTTLIDMYMKCGCVETALEVFYGM-IEKGISTWNALI 581
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/246 (22%), Positives = 106/246 (43%), Gaps = 32/246 (13%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI N F+ETL+ + M +G + T V+ ACA + ++ GK VH+++ + G
Sbjct: 479 MISGYAQNDLFDETLALFQEMQMSGFKPDETTLVSVISACARLAALEQGKWVHAYIKRNG 538
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+ + T LIDMY KC ++ +V M + + +WN++I + L + ++ +
Sbjct: 539 LTINVILGTTLIDMYMKCGCVETALEVFYGMIE--KGISTWNALILGLAMNGLVESSLDM 596
Query: 121 LKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGK 180
M + + TF+ V+ C +GL++ G+
Sbjct: 597 FSNMKKCHVTPNEITFMGVLGACR------------HMGLVDE---------------GQ 629
Query: 181 VNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILG 240
+ I D + ++ + ++ G + EA L N RM +TPD+ + L+
Sbjct: 630 HHFYSMIHDHKIQPNVKHYGCMVDLLGRAGKLQEAEELLN---RMPMTPDVATWGALLGA 686
Query: 241 CAQVGN 246
C + G+
Sbjct: 687 CKKHGD 692
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 63/278 (22%), Positives = 122/278 (43%), Gaps = 23/278 (8%)
Query: 306 GYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLES 365
Y Q P A L+K +L + + T + AC+ S + K++ +++ G +S
Sbjct: 187 AYIQTNSPHFAFTLYKSMLSNYLGADNYTYPLLIQACSIRRSEWEAKQVHNHVLKLGFDS 246
Query: 366 NRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQ 425
+ V+ +LI+ FS C + A VF D W++++ GY G ++A +++++M
Sbjct: 247 DVYVRNTLINCFSVCSNMTDACRVFNESSVLDSVSWNSILAGYIEIGNVEEAKHIYHQMP 306
Query: 426 HVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGR 485
+ + S++ G+V + F M +E + + L+ +
Sbjct: 307 -----ERSIIASNSMIVLFGMRGLVVEACKLFDEM-----LEKDMVTWSALIACFQQNEM 356
Query: 486 FDLALKT---IHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILM 542
++ A++T +H++ V V V LSAC V +G+ L+L G T +YI +
Sbjct: 357 YEEAIRTFVGMHKIGVMVDEVVAVSALSACANLLVVNMGKLIHS--LSLKIG-TESYINL 413
Query: 543 AN----LFTSAGMWKEAATARGLMDDRRLTKEPGWSQV 576
N +++ G + AR L D+ L W+ +
Sbjct: 414 QNALIYMYSKCG---DIMVARKLFDEAYLLDLISWNSM 448
>gi|226505108|ref|NP_001141927.1| uncharacterized protein LOC100274076 [Zea mays]
gi|194706472|gb|ACF87320.1| unknown [Zea mays]
gi|413938142|gb|AFW72693.1| hypothetical protein ZEAMMB73_533387 [Zea mays]
Length = 583
Score = 353 bits (906), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 198/577 (34%), Positives = 318/577 (55%), Gaps = 19/577 (3%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
++R+ + G + L+ YS M H + TF KACA + G+ VH L G
Sbjct: 13 LLRSYSGLGFHRQALALYSQMR----HFDHLTFTFAAKACAGLRLRRHGRAVHGRALAAG 68
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F DA+VQ ++ MY +C D ++ V +P R + VSWN++I+ + + A+ V
Sbjct: 69 FGSDAYVQNAIVSMYMRCRDVAAAEAVFVALPSR--TTVSWNTVITGCVKDGRAERALEV 126
Query: 121 LKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGL---LNNEIPLANSVMSMYAK 177
+ M G+ + ++ VSV+ C+ + + V++L + L + + N+++ MY K
Sbjct: 127 FETMVDRGVCIDRASVVSVLPACAQARDLHTGRAVHRLAVVRGLGKYVAVKNALIDMYGK 186
Query: 178 FGKVNEARSIFDEIG-ETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMS-VTPDLVVFL 235
G + +AR +FDE + +VSWT +IG YV + ++AF L ++M S P+ V
Sbjct: 187 CGSLEDARRVFDEDSYDKDVVSWTVMIGAYVLNDHASKAFALGSEMLVSSEAQPNAVTMA 246
Query: 236 NLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEK 295
+L+ CA + + A H+L ++ G ++ ++ LV Y KCG + V D V+EK
Sbjct: 247 HLLSACASLLSGKHAKCTHALCIRLGLGSDIVVETALVDCYAKCGYMG----VIDMVVEK 302
Query: 296 S---VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGK 352
W + I GY Q +A+ LFKR+L SVRP+ AT+A+ + A AE L +
Sbjct: 303 GSRRTETWNAAISGYTQRDQGKKALALFKRMLAESVRPDSATMASVIPAYAESADLVQAN 362
Query: 353 EIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHG 412
I +++ G + + T LI +++K G + A E+F+ +P+KD+ W+ +I GY +HG
Sbjct: 363 NIHCCLLVRGCLVSTDIATGLIDLYAKAGDLGVAWELFQCLPEKDVVAWTTVIAGYGMHG 422
Query: 413 MGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEH 472
A+ L+ +M + G+ P+ V S+L +CSH+GMVD+GL F M G+ P+ EH
Sbjct: 423 HAQTAMLLYSRMVEL-GVMPNTVTIASLLHSCSHAGMVDEGLRLFNDMHGVHGLMPNAEH 481
Query: 473 YLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLN 532
YLCLVD+LGRAGR + A + I +MP E VW+ LL AC+ H NVE GE AAK+L L
Sbjct: 482 YLCLVDMLGRAGRIEEAYRRIEDMPFEPTVSVWSSLLGACVLHENVEFGEVAAKHLFELE 541
Query: 533 PGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTK 569
P + GNY+L+ ++ +A W + R +M++ TK
Sbjct: 542 PDNVGNYVLLGKVYAAAERWSDVQHLRRVMEEWIFTK 578
>gi|357510605|ref|XP_003625591.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355500606|gb|AES81809.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 887
Score = 353 bits (906), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 205/620 (33%), Positives = 326/620 (52%), Gaps = 10/620 (1%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI + NG + + Y M ++G + TF V+KAC I G+++H+HV+K
Sbjct: 231 MISGYSQNGQANDAIIMYIQMTRSGQFPDQLTFGSVIKACYIAGDIDLGRQLHAHVIKSW 290
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F Q LI MY+ + V +P + ++SW ++I+ + + EA+ +
Sbjct: 291 FGHHLTSQNALISMYTNFGQIEHASNVFTRIPTK--DLISWGTMITGYIQLGYRVEALYL 348
Query: 121 LKEMWVLG-LELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMY 175
+++ G + + F SV S CS G +H K GL N + S+ MY
Sbjct: 349 FRDLLRQGTYQPNEFIFGSVFSACSSLLELEYGKQVHGMCVKFGLRRN-VFAGCSLCDMY 407
Query: 176 AKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFL 235
AKFG + A+ F +I IVSW II + + G+ NEA QM + +TPD + ++
Sbjct: 408 AKFGFLPSAKMAFCQIKNPDIVSWNAIIAAFADNGDANEAIDFFRQMIHIGLTPDSITYI 467
Query: 236 NLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVF-DAVLE 294
+L+ C L +HS ++K G++ E + N L++MYTKC L A VF D
Sbjct: 468 SLLCTCGSPVRLNQGRQIHSYIVKIGFDKEITVCNSLLTMYTKCSHLHDALNVFRDISRN 527
Query: 295 KSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEI 354
++ W +++ Q E L+K + + +P+ T+ T L CAEL SL G ++
Sbjct: 528 ANLVSWNAILSACLQKKQEGETFRLYKEMHFSGNKPDSITITTLLGTCAELTSLGVGNQV 587
Query: 355 EEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMG 414
Y + +GL + V LI M++KCG + A++VF+ + D+ WS++I GYA G+G
Sbjct: 588 HCYSIKSGLILDVSVCNGLIDMYAKCGSLKHARDVFDSTQNLDIVSWSSLIVGYAQCGLG 647
Query: 415 DQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYL 474
+ALNLF M ++ G++P+ V Y LSACSH G+V++G +KSM++ GI P+ EH+
Sbjct: 648 HEALNLFRIMTNL-GVQPNEVTYLGALSACSHIGLVEEGWRLYKSMETEHGIPPTREHFS 706
Query: 475 CLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPG 534
C+VDLL RAG A I + ++ W LL+AC H+NV++ E A N+L L+P
Sbjct: 707 CIVDLLARAGCLHEAETFIQKSGLDADITAWKTLLAACKTHNNVDIAERGAGNILKLDPS 766
Query: 535 STGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHL 594
++ +++ N+ SAG W+E A R LM + K PG S +E+ +F + D SH
Sbjct: 767 NSAAMVMLCNIHASAGNWEEVAKLRKLMKQMGVQKVPGQSWIEVKDKFHIFFSEDSSHPQ 826
Query: 595 SVDIRKTLKELHIKLLEAGY 614
I L+EL ++L+ GY
Sbjct: 827 RNLIYTMLEELWSQVLDDGY 846
Score = 202 bits (514), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 126/442 (28%), Positives = 219/442 (49%), Gaps = 11/442 (2%)
Query: 11 FEETLSTYSSMLQ-TGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQT 69
++E L + L+ + H T+ ++ ACAN S+ K++H HVLK +Q +Q
Sbjct: 139 YKEALEAFDFHLKNSNSHFEPSTYTSLVLACANFRSLDYAKKIHDHVLKSNYQPSIILQN 198
Query: 70 GLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGL 129
+I+MY KC +RKV D M +L +VVSW S+IS +S+ ++AI++ +M G
Sbjct: 199 HMINMYGKCGSMKDARKVFDTM--QLPNVVSWTSMISGYSQNGQANDAIIMYIQMTRSGQ 256
Query: 130 ELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEAR 185
TF SV+ C G +H V K + + N+++SMY FG++ A
Sbjct: 257 FPDQLTFGSVIKACYIAGDIDLGRQLHAHVIK-SWFGHHLTSQNALISMYTNFGQIEHAS 315
Query: 186 SIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQ-MRRMSVTPDLVVFLNLILGCAQV 244
++F I ++SW T+I GY+ +G EA L +R+ + P+ +F ++ C+ +
Sbjct: 316 NVFTRIPTKDLISWGTMITGYIQLGYRVEALYLFRDLLRQGTYQPNEFIFGSVFSACSSL 375
Query: 245 GNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMI 304
L +H + +K G L MY K G L A+ F + + W ++I
Sbjct: 376 LELEYGKQVHGMCVKFGLRRNVFAGCSLCDMYAKFGFLPSAKMAFCQIKNPDIVSWNAII 435
Query: 305 GGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLE 364
+A G +EA++ F++++ + P+ T + L C L++G++I YIV G +
Sbjct: 436 AAFADNGDANEAIDFFRQMIHIGLTPDSITYISLLCTCGSPVRLNQGRQIHSYIVKIGFD 495
Query: 365 SNRQVQTSLIHMFSKCGRINKAKEVFERVP-DKDLAVWSAMINGYAIHGMGDQALNLFYK 423
V SL+ M++KC ++ A VF + + +L W+A+++ + L YK
Sbjct: 496 KEITVCNSLLTMYTKCSHLHDALNVFRDISRNANLVSWNAILSACLQKKQEGETFRL-YK 554
Query: 424 MQHVEGLKPDAVVYTSILSACS 445
H G KPD++ T++L C+
Sbjct: 555 EMHFSGNKPDSITITTLLGTCA 576
Score = 199 bits (505), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 120/389 (30%), Positives = 197/389 (50%), Gaps = 6/389 (1%)
Query: 130 ELSASTFVSVVSGCSFRQGISMHCCVYKLGLLNNEIP---LANSVMSMYAKFGKVNEARS 186
ST+ S+V C+ + + ++ L +N P L N +++MY K G + +AR
Sbjct: 156 HFEPSTYTSLVLACANFRSLDYAKKIHDHVLKSNYQPSIILQNHMINMYGKCGSMKDARK 215
Query: 187 IFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGN 246
+FD + ++VSWT++I GY G N+A + QM R PD + F ++I C G+
Sbjct: 216 VFDTMQLPNVVSWTSMISGYSQNGQANDAIIMYIQMTRSGQFPDQLTFGSVIKACYIAGD 275
Query: 247 LFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGG 306
+ L +H+ ++KS + + N L+SMYT G +E A VF + K + W +MI G
Sbjct: 276 IDLGRQLHAHVIKSWFGHHLTSQNALISMYTNFGQIEHASNVFTRIPTKDLISWGTMITG 335
Query: 307 YAQLGYPSEAVNLFKRLLKT-SVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLES 365
Y QLGY EA+ LF+ LL+ + +PNE + SAC+ L L GK++ V GL
Sbjct: 336 YIQLGYRVEALYLFRDLLRQGTYQPNEFIFGSVFSACSSLLELEYGKQVHGMCVKFGLRR 395
Query: 366 NRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQ 425
N SL M++K G + AK F ++ + D+ W+A+I +A +G ++A++ F +M
Sbjct: 396 NVFAGCSLCDMYAKFGFLPSAKMAFCQIKNPDIVSWNAIIAAFADNGDANEAIDFFRQMI 455
Query: 426 HVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGR 485
H+ GL PD++ Y S+L C ++ G S G + I L+ + +
Sbjct: 456 HI-GLTPDSITYISLLCTCGSPVRLNQGRQ-IHSYIVKIGFDKEITVCNSLLTMYTKCSH 513
Query: 486 FDLALKTIHEMPVEVQAQVWAPLLSACMK 514
AL ++ W +LSAC++
Sbjct: 514 LHDALNVFRDISRNANLVSWNAILSACLQ 542
>gi|302762388|ref|XP_002964616.1| hypothetical protein SELMODRAFT_82072 [Selaginella moellendorffii]
gi|300168345|gb|EFJ34949.1| hypothetical protein SELMODRAFT_82072 [Selaginella moellendorffii]
Length = 795
Score = 353 bits (906), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 199/627 (31%), Positives = 342/627 (54%), Gaps = 16/627 (2%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKV- 59
M+ NG + L Y M + N + VL ACA+I ++ +GK +HS +
Sbjct: 95 MLTAYAQNGHYRAALDLYKRM---DLQPNPVVYTTVLGACASIKALEEGKAIHSRISGTK 151
Query: 60 GFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAIL 119
G + D ++ L+ MY+KC ++++ + M R SV SWN++I+A++++ +EAI
Sbjct: 152 GLKLDVILENSLLTMYAKCGSLEDAKRLFERMSGR--SVSSWNAMIAAYAQSGHFEEAIR 209
Query: 120 VLKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMY 175
+ ++M V E S TF SV+S CS QG +H + G ++ L N++++MY
Sbjct: 210 LYEDMDV---EPSVRTFTSVLSACSNLGLLDQGRKIHALISSRGT-ELDLSLQNALLTMY 265
Query: 176 AKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFL 235
A+ +++A IF + +VSW+ +I + +EA ++M+ V P+ F
Sbjct: 266 ARCKCLDDAAKIFQRLPRRDVVSWSAMIAAFAETDLFDEAIEFYSKMQLEGVRPNYYTFA 325
Query: 236 NLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEK 295
+++L CA VG+L ++H +L +GY LV +YT G L+ AR +FD + +
Sbjct: 326 SVLLACASVGDLRAGRAVHDQILGNGYKITLVNGTALVDLYTSYGSLDEARSLFDQIENR 385
Query: 296 SVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRP-NEATLATTLSACAELGSLSKGKEI 354
LWT +IGGY++ G+ + + L++ + T+ P + + +SACA LG+ + ++
Sbjct: 386 DEGLWTVLIGGYSKQGHRTGVLELYREMKNTTKVPATKIIYSCVISACASLGAFADARQA 445
Query: 355 EEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMG 414
I +G+ S+ + TSL++M+S+ G + A++VF+++ +D W+ +I GYA HG
Sbjct: 446 HSDIEADGMISDFVLATSLVNMYSRWGNLESARQVFDKMSSRDTLAWTTLIAGYAKHGEH 505
Query: 415 DQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYL 474
AL L+ +M+ +EG +P + + +L ACSH+G+ + G F S+QS++ + P+I HY
Sbjct: 506 GLALGLYKEME-LEGAEPSELTFMVVLYACSHAGLQEQGKQLFISIQSDYAMHPNIAHYS 564
Query: 475 CLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPG 534
C++DLL RAGR A + I+ MPVE W+ LL A H +V+ +AA + L+P
Sbjct: 565 CIIDLLSRAGRLSDAEELINAMPVEPNDVTWSSLLGASRIHKDVKRATHAAGQITKLDPV 624
Query: 535 STGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHL 594
+Y+L++N+ G A+ R M R + K G S +E+ + F GD SH
Sbjct: 625 DPASYVLLSNVHAVTGNLAGMASVRNTMVARGVKKRRGSSWIEVADQIHEFNVGDNSHPR 684
Query: 595 SVDIRKTLKELHIKLLEAGYIAEADIV 621
+I L+ L K+ EAGY+ E++ V
Sbjct: 685 FQEIFAELQRLSPKIKEAGYVPESEEV 711
Score = 188 bits (477), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 126/431 (29%), Positives = 215/431 (49%), Gaps = 26/431 (6%)
Query: 159 GLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGL 218
G + + L N ++ Y K G V AR+ FD I + SW +++ Y G+ A L
Sbjct: 52 GAASANVFLGNEIVRAYGKCGSVASARAAFDAIARKNDYSWGSMLTAYAQNGHYRAALDL 111
Query: 219 CNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKS-GYNNEDPLDNLLVSMYT 277
+RM + P+ VV+ ++ CA + L ++HS + + G + L+N L++MY
Sbjct: 112 ---YKRMDLQPNPVVYTTVLGACASIKALEEGKAIHSRISGTKGLKLDVILENSLLTMYA 168
Query: 278 KCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLAT 337
KCG LE A+R+F+ + +SV W +MI YAQ G+ EA+ L++ + V P+ T +
Sbjct: 169 KCGSLEDAKRLFERMSGRSVSSWNAMIAAYAQSGHFEEAIRLYEDM---DVEPSVRTFTS 225
Query: 338 TLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKD 397
LSAC+ LG L +G++I I G E + +Q +L+ M+++C ++ A ++F+R+P +D
Sbjct: 226 VLSACSNLGLLDQGRKIHALISSRGTELDLSLQNALLTMYARCKCLDDAAKIFQRLPRRD 285
Query: 398 LAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFF 457
+ WSAMI +A + D+A+ + KMQ +EG++P+ + S+L AC+ G + G +
Sbjct: 286 VVSWSAMIAAFAETDLFDEAIEFYSKMQ-LEGVRPNYYTFASVLLACASVGDLRAGRAVH 344
Query: 458 KSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMK--H 515
+ N G + ++ + LVDL G D A +++ + +W L+ K H
Sbjct: 345 DQILGN-GYKITLVNGTALVDLYTSYGSLDEA-RSLFDQIENRDEGLWTVLIGGYSKQGH 402
Query: 516 HNVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQ 575
L Y T P + Y + + S G + +A A S
Sbjct: 403 RTGVLELYREMKNTTKVPATKIIYSCVISACASLGAFADARQAH--------------SD 448
Query: 576 VEIDGSVQVFV 586
+E DG + FV
Sbjct: 449 IEADGMISDFV 459
>gi|297831842|ref|XP_002883803.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297329643|gb|EFH60062.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 697
Score = 353 bits (905), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 208/640 (32%), Positives = 328/640 (51%), Gaps = 78/640 (12%)
Query: 29 NSFT----FPLVLKACANIN-SIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVS 83
+SFT F +L +C + S D + VH+ V+K GF + F+Q LID Y+KC
Sbjct: 14 SSFTVSSPFAKLLDSCIKLKLSAIDVRCVHASVIKSGFSNEVFIQNRLIDAYAKCGSLED 73
Query: 84 SRKVLDEMPVR-----------------------------LRSVVSWNSIISAHSRACLN 114
R++ D+MP R R +WNS++S ++
Sbjct: 74 GRQLFDKMPQRNVFTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRC 133
Query: 115 DEAILVLKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANS 170
+EA+ M G L+ TF S +S CS +G+ +H + K L++ + + ++
Sbjct: 134 EEALYYFAMMHKEGFVLNEYTFASGLSACSGLNDMNRGVQIHSLIAKSPCLSD-VYIGSA 192
Query: 171 VMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPD 230
++ MY+K G VN+A+ +FDE+G+ ++VSW ++I Y G EA + M V PD
Sbjct: 193 LVDMYSKCGNVNDAQQVFDEMGDRNVVSWNSLITCYEQNGPAVEALKVFQVMLESWVEPD 252
Query: 231 LVVFLNLILGCAQVGNLFLALSMHSLLLK-SGYNNEDPLDNLLVSMYTKCGDLELARRVF 289
V ++I CA + + + +H+ ++K N+ L N V MY KC ++ AR +F
Sbjct: 253 EVTLASVISACASLSAIKVGQEVHARVVKMDKLRNDIILSNAFVDMYAKCSRIKEARFIF 312
Query: 290 DA-------------------------------VLEKSVFLWTSMIGGYAQLGYPSEAVN 318
D+ + E++V W ++I GY Q G EA++
Sbjct: 313 DSMPIRNVIAETSMVSGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALS 372
Query: 319 LFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGL------ESNRQVQTS 372
LF L + SV P T A L ACA+L L G + +++ +G E + V S
Sbjct: 373 LFCLLKRESVCPTHYTFANILKACADLADLHLGMQAHVHVLKHGFKFQSGEEDDIFVGNS 432
Query: 373 LIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKP 432
LI M+ KCG + + VF ++ ++D W+AMI G+A +G G++AL LF +M G KP
Sbjct: 433 LIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLD-SGEKP 491
Query: 433 DAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKT 492
D + +LSAC H+G V++G +F SM +FG+ P +HY C+VDLLGRAG + A
Sbjct: 492 DHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSI 551
Query: 493 IHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMW 552
I EMPV+ + +W LL+AC H N+ LG+Y A+ L + ++G Y+L++N++ G W
Sbjct: 552 IEEMPVQPDSVIWGSLLAACKVHRNITLGKYVAEKLFEVETSNSGPYVLLSNMYAELGKW 611
Query: 553 KEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSH 592
+A R LM +TK+PG S ++I G VF+ D+SH
Sbjct: 612 GDAMNVRKLMRKEGVTKQPGCSWIKIPGHAHVFMVKDKSH 651
Score = 219 bits (559), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 139/454 (30%), Positives = 224/454 (49%), Gaps = 45/454 (9%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
M+ + EE L ++ M + G N +TF L AC+ +N + G ++HS + K
Sbjct: 123 MVSGFAQHDRCEEALYYFAMMHKEGFVLNEYTFASGLSACSGLNDMNRGVQIHSLIAKSP 182
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
D ++ + L+DMYSKC + +++V DEM R+VVSWNS+I+ + + EA+ V
Sbjct: 183 CLSDVYIGSALVDMYSKCGNVNDAQQVFDEMGD--RNVVSWNSLITCYEQNGPAVEALKV 240
Query: 121 LKEMWVLGLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
+ M +E T SV+S C + + G +H V K+ L N+I L+N+ + MYA
Sbjct: 241 FQVMLESWVEPDEVTLASVISACASLSAIKVGQEVHARVVKMDKLRNDIILSNAFVDMYA 300
Query: 177 KFGKVNEARSIFDE------IGETS-------------------------IVSWTTIIGG 205
K ++ EAR IFD I ETS +VSW +I G
Sbjct: 301 KCSRIKEARFIFDSMPIRNVIAETSMVSGYAMAASTKAARLMFTKMAERNVVSWNALIAG 360
Query: 206 YVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYN-- 263
Y G EA L ++R SV P F N++ CA + +L L + H +LK G+
Sbjct: 361 YTQNGENEEALSLFCLLKRESVCPTHYTFANILKACADLADLHLGMQAHVHVLKHGFKFQ 420
Query: 264 --NEDPL--DNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNL 319
ED + N L+ MY KCG +E VF ++E+ W +MI G+AQ GY +EA+ L
Sbjct: 421 SGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALEL 480
Query: 320 FKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLN-GLESNRQVQTSLIHMFS 378
F+ +L + +P+ T+ LSAC G + +G+ + + G+ R T ++ +
Sbjct: 481 FREMLDSGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLG 540
Query: 379 KCGRINKAKEVFERVP-DKDLAVWSAMINGYAIH 411
+ G + +AK + E +P D +W +++ +H
Sbjct: 541 RAGFLEEAKSIIEEMPVQPDSVIWGSLLAACKVH 574
>gi|357465899|ref|XP_003603234.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355492282|gb|AES73485.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 973
Score = 353 bits (905), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 192/613 (31%), Positives = 336/613 (54%), Gaps = 9/613 (1%)
Query: 13 ETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLI 72
E + + M+++ V +S T+ ++L A++N + GK++H V++ G+ Q V I
Sbjct: 280 EAVDCFRDMIKSRVPCDSLTYIVILSVVASLNHLELGKQIHGAVVRFGWDQFVSVANSAI 339
Query: 73 DMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELS 132
+MY K +R++ +M + ++SWN++IS +R+ L + ++ + ++ GL
Sbjct: 340 NMYVKAGSVNYARRMFGQM--KEVDLISWNTVISGCARSGLEECSLRLFIDLLRSGLLPD 397
Query: 133 ASTFVSVVSGCS-----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSI 187
T SV+ CS + G +H C K G++ + ++ +++ +Y+K GK+ EA +
Sbjct: 398 QFTITSVLRACSSLEESYCVGRQVHTCALKAGIVLDSF-VSTALIDVYSKGGKMEEAELL 456
Query: 188 FDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNL 247
F + SW ++ G+ N EA L + M D + F N + L
Sbjct: 457 FHNQDGFDLASWNAMMHGFTVSDNYREALRLFSLMHERGEKADQITFANAAKAAGCLVRL 516
Query: 248 FLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGY 307
+H++++K ++ + + + ++ MY KCG+++ AR+VF+ + WT++I G
Sbjct: 517 QQGKQIHAVVIKMRFHYDLFVISGILDMYLKCGEMKSARKVFNQIPSPDDVAWTTVISGC 576
Query: 308 AQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNR 367
+ G +A+ + ++ V+P+E T AT + AC+ L +L +GK+I I+ +
Sbjct: 577 VENGEEEQALFTYHQMRLAGVQPDEYTFATLVKACSLLTALEQGKQIHANIMKLNCAFDP 636
Query: 368 QVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHV 427
V TSL+ M++KCG I A +F R+ + +A+W+AMI G A HG ++ALN F +M+
Sbjct: 637 FVMTSLVDMYAKCGNIEDAYGLFRRMNTRSVALWNAMIVGLAQHGNAEEALNFFNEMKS- 695
Query: 428 EGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFD 487
G+ PD V + +LSACSHSG+ D F SMQ +G+EP IEHY CLVD L RAG
Sbjct: 696 RGVTPDRVTFIGVLSACSHSGLTSDAYKNFDSMQKTYGVEPEIEHYSCLVDALSRAGHIQ 755
Query: 488 LALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFT 547
A K + MP E A ++ LL+AC + E GE A+ L T++P + Y+L++N++
Sbjct: 756 EAEKVVSSMPFEASATMYRTLLNACRVQGDKETGERVAEKLFTMDPSDSAAYVLLSNIYA 815
Query: 548 SAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKELHI 607
+A W+ A +AR +M + KEPG+S +++ V +FVAGDRSH + I ++ +
Sbjct: 816 AANQWENAVSARNMMKRVNVKKEPGFSWIDMKNKVHLFVAGDRSHEETDLIYNKVEYVMK 875
Query: 608 KLLEAGYIAEADI 620
++ E GY+ + +
Sbjct: 876 RIKEEGYVPDTEF 888
Score = 169 bits (427), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 120/419 (28%), Positives = 204/419 (48%), Gaps = 10/419 (2%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANI-NSIWDGKRVHSHVLKV 59
+I +G E +L + +L++G+ + FT VL+AC+++ S G++VH+ LK
Sbjct: 369 VISGCARSGLEECSLRLFIDLLRSGLLPDQFTITSVLRACSSLEESYCVGRQVHTCALKA 428
Query: 60 GFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAIL 119
G D+FV T LID+YSK + + + SWN+++ + + EA+
Sbjct: 429 GIVLDSFVSTALIDVYSKGGKMEEAELLFHNQDG--FDLASWNAMMHGFTVSDNYREALR 486
Query: 120 VLKEMWVLGLELSASTFVSV--VSGCSFR--QGISMHCCVYKLGLLNNEIPLANSVMSMY 175
+ M G + TF + +GC R QG +H V K+ + ++ + + ++ MY
Sbjct: 487 LFSLMHERGEKADQITFANAAKAAGCLVRLQQGKQIHAVVIKMR-FHYDLFVISGILDMY 545
Query: 176 AKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFL 235
K G++ AR +F++I V+WTT+I G V G +A +QMR V PD F
Sbjct: 546 LKCGEMKSARKVFNQIPSPDDVAWTTVISGCVENGEEEQALFTYHQMRLAGVQPDEYTFA 605
Query: 236 NLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEK 295
L+ C+ + L +H+ ++K + + LV MY KCG++E A +F + +
Sbjct: 606 TLVKACSLLTALEQGKQIHANIMKLNCAFDPFVMTSLVDMYAKCGNIEDAYGLFRRMNTR 665
Query: 296 SVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKG-KEI 354
SV LW +MI G AQ G EA+N F + V P+ T LSAC+ G S K
Sbjct: 666 SVALWNAMIVGLAQHGNAEEALNFFNEMKSRGVTPDRVTFIGVLSACSHSGLTSDAYKNF 725
Query: 355 EEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVP-DKDLAVWSAMINGYAIHG 412
+ G+E + + L+ S+ G I +A++V +P + ++ ++N + G
Sbjct: 726 DSMQKTYGVEPEIEHYSCLVDALSRAGHIQEAEKVVSSMPFEASATMYRTLLNACRVQG 784
Score = 155 bits (391), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 115/423 (27%), Positives = 198/423 (46%), Gaps = 40/423 (9%)
Query: 33 FPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMP 92
F ++ A A+ + I GKR H+ ++ G D +V LI MY+KC S+RK+ D P
Sbjct: 17 FSILRHAIADSDLIL-GKRTHAVIVTSGLNPDRYVTNNLITMYAKCGSLFSARKLFDITP 75
Query: 93 VRLRSVVSWNSIISAHSRAC-LND-----EAILVLKEMWVLGLELSASTFVSVVSGC--- 143
R +V++N+I++A++ L+D EA + + + + + T + C
Sbjct: 76 QSDRDLVTYNAILAAYAHTGELHDVEKTHEAFHIFRLLRQSVMLTTRHTLSPLFKLCLLY 135
Query: 144 -SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTI 202
S ++ K+GL ++ +A +++++YAKF ++ EAR +FD + +V W +
Sbjct: 136 GSPSASEALQGYAVKIGL-QWDVFVAGALVNIYAKFQRIREARVLFDRMPVRDVVLWNVM 194
Query: 203 IGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGY 262
+ YV +G +E GL + R + PD V +++G + K+ +
Sbjct: 195 MKAYVEMGAGDEVLGLFSAFHRSGLRPDCVSVRTILMGVGK---------------KTVF 239
Query: 263 NNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKR 322
E + C D + V +W + Y Q G EAV+ F+
Sbjct: 240 ERELEQVRAYATKLFVCDD------------DSDVTVWNKTLSSYLQAGEGWEAVDCFRD 287
Query: 323 LLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGR 382
++K+ V + T LS A L L GK+I +V G + V S I+M+ K G
Sbjct: 288 MIKSRVPCDSLTYIVILSVVASLNHLELGKQIHGAVVRFGWDQFVSVANSAINMYVKAGS 347
Query: 383 INKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILS 442
+N A+ +F ++ + DL W+ +I+G A G+ + +L LF + GL PD TS+L
Sbjct: 348 VNYARRMFGQMKEVDLISWNTVISGCARSGLEECSLRLFIDLLR-SGLLPDQFTITSVLR 406
Query: 443 ACS 445
ACS
Sbjct: 407 ACS 409
Score = 148 bits (373), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 103/428 (24%), Positives = 203/428 (47%), Gaps = 11/428 (2%)
Query: 98 VVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCS----FRQGISMHC 153
V WN +S++ +A EA+ ++M + + T++ ++S + G +H
Sbjct: 262 VTVWNKTLSSYLQAGEGWEAVDCFRDMIKSRVPCDSLTYIVILSVVASLNHLELGKQIHG 321
Query: 154 CVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVN 213
V + G + + +ANS ++MY K G VN AR +F ++ E ++SW T+I G G
Sbjct: 322 AVVRFG-WDQFVSVANSAINMYVKAGSVNYARRMFGQMKEVDLISWNTVISGCARSGLEE 380
Query: 214 EAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLF-LALSMHSLLLKSGYNNEDPLDNLL 272
+ L + R + PD +++ C+ + + + +H+ LK+G + + L
Sbjct: 381 CSLRLFIDLLRSGLLPDQFTITSVLRACSSLEESYCVGRQVHTCALKAGIVLDSFVSTAL 440
Query: 273 VSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNE 332
+ +Y+K G +E A +F + W +M+ G+ EA+ LF + + + ++
Sbjct: 441 IDVYSKGGKMEEAELLFHNQDGFDLASWNAMMHGFTVSDNYREALRLFSLMHERGEKADQ 500
Query: 333 ATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFER 392
T A A L L +GK+I ++ + V + ++ M+ KCG + A++VF +
Sbjct: 501 ITFANAAKAAGCLVRLQQGKQIHAVVIKMRFHYDLFVISGILDMYLKCGEMKSARKVFNQ 560
Query: 393 VPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDD 452
+P D W+ +I+G +G +QAL +++M+ + G++PD + +++ ACS ++
Sbjct: 561 IPSPDDVAWTTVISGCVENGEEEQALFTYHQMR-LAGVQPDEYTFATLVKACSLLTALEQ 619
Query: 453 GLSFFKS-MQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSA 511
G + M+ N +P + LVD+ + G + A M A +W ++
Sbjct: 620 GKQIHANIMKLNCAFDPFV--MTSLVDMYAKCGNIEDAYGLFRRMNTRSVA-LWNAMIVG 676
Query: 512 CMKHHNVE 519
+H N E
Sbjct: 677 LAQHGNAE 684
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 128/554 (23%), Positives = 236/554 (42%), Gaps = 61/554 (11%)
Query: 13 ETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLI 72
E + + Q+ + T + K C S + + + +K+G Q D FV L+
Sbjct: 105 EAFHIFRLLRQSVMLTTRHTLSPLFKLCLLYGSPSASEALQGYAVKIGLQWDVFVAGALV 164
Query: 73 DMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELS 132
++Y+K +R + D MPVR VV WN ++ A+ DE + + GL
Sbjct: 165 NIYAKFQRIREARVLFDRMPVR--DVVLWNVMMKAYVEMGAGDEVLGLFSAFHRSGLRPD 222
Query: 133 ASTFVSVVSGCSFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIG 192
+ +++ G V K + E+ + A +F
Sbjct: 223 CVSVRTILMG------------VGKKTVFERELEQVRAY------------ATKLFVCDD 258
Query: 193 ETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALS 252
++ + W + Y+ G EA M + V D + ++ ++ A + +L L
Sbjct: 259 DSDVTVWNKTLSSYLQAGEGWEAVDCFRDMIKSRVPCDSLTYIVILSVVASLNHLELGKQ 318
Query: 253 MHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGY 312
+H +++ G++ + N ++MY K G + ARR+F + E + W ++I G A+ G
Sbjct: 319 IHGAVVRFGWDQFVSVANSAINMYVKAGSVNYARRMFGQMKEVDLISWNTVISGCARSGL 378
Query: 313 PSEAVNLFKRLLKTSVRPNEATLATTLSACAEL-GSLSKGKEIEEYIVLNGLESNRQVQT 371
++ LF LL++ + P++ T+ + L AC+ L S G+++ + G+ + V T
Sbjct: 379 EECSLRLFIDLLRSGLLPDQFTITSVLRACSSLEESYCVGRQVHTCALKAGIVLDSFVST 438
Query: 372 SLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLK 431
+LI ++SK G++ +A+ +F DLA W+AM++G+ + +AL LF + H G K
Sbjct: 439 ALIDVYSKGGKMEEAELLFHNQDGFDLASWNAMMHGFTVSDNYREALRLF-SLMHERGEK 497
Query: 432 PDAVVYTSILSACS-----------H---------------SGMVDDGLSF--FKSMQSN 463
D + + + A H SG++D L KS +
Sbjct: 498 ADQITFANAAKAAGCLVRLQQGKQIHAVVIKMRFHYDLFVISGILDMYLKCGEMKSARKV 557
Query: 464 FGIEPSIEH--YLCLVDLLGRAGRFDLALKTIHEMP---VEVQAQVWAPLLSACMKHHNV 518
F PS + + ++ G + AL T H+M V+ +A L+ AC +
Sbjct: 558 FNQIPSPDDVAWTTVISGCVENGEEEQALFTYHQMRLAGVQPDEYTFATLVKACSLLTAL 617
Query: 519 ELGEYAAKNLLTLN 532
E G+ N++ LN
Sbjct: 618 EQGKQIHANIMKLN 631
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 97/363 (26%), Positives = 163/363 (44%), Gaps = 46/363 (12%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
M+ T + ++ E L +S M + G + TF KA + + GK++H+ V+K+
Sbjct: 471 MMHGFTVSDNYREALRLFSLMHERGEKADQITFANAAKAAGCLVRLQQGKQIHAVVIKMR 530
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F D FV +G++DMY KC + S+RKV +++P V+W ++IS ++A+
Sbjct: 531 FHYDLFVISGILDMYLKCGEMKSARKVFNQIPS--PDDVAWTTVISGCVENGEEEQALFT 588
Query: 121 LKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
+M + G++ TF ++V CS QG +H + KL + + S++ MYA
Sbjct: 589 YHQMRLAGVQPDEYTFATLVKACSLLTALEQGKQIHANIMKLNCAFDPFVM-TSLVDMYA 647
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K G + +A +F + S+ W +I G GN EA N+M+ VTPD V F+
Sbjct: 648 KCGNIEDAYGLFRRMNTRSVALWNAMIVGLAQHGNAEEALNFFNEMKSRGVTPDRVTFIG 707
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
++ C+ HS L Y N D SM G +E
Sbjct: 708 VLSACS-----------HSGLTSDAYKNFD-------SMQKTYG------------VEPE 737
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLA---TTLSACAELGSLSKGKE 353
+ ++ ++ ++ G+ EA + S P EA+ T L+AC G G+
Sbjct: 738 IEHYSCLVDALSRAGHIQEAEKV------VSSMPFEASATMYRTLLNACRVQGDKETGER 791
Query: 354 IEE 356
+ E
Sbjct: 792 VAE 794
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 122/229 (53%), Gaps = 11/229 (4%)
Query: 223 RRMSVTPD--LVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCG 280
R+ SV+P L + +++ +L L H++++ SG N + + N L++MY KCG
Sbjct: 3 RKCSVSPSSLLPQWFSILRHAIADSDLILGKRTHAVIVTSGLNPDRYVTNNLITMYAKCG 62
Query: 281 DLELARRVFDAVLE--KSVFLWTSMIGGYAQLG------YPSEAVNLFKRLLKTSVRPNE 332
L AR++FD + + + + +++ YA G EA ++F+ L ++ +
Sbjct: 63 SLFSARKLFDITPQSDRDLVTYNAILAAYAHTGELHDVEKTHEAFHIFRLLRQSVMLTTR 122
Query: 333 ATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFER 392
TL+ C GS S + ++ Y V GL+ + V +L+++++K RI +A+ +F+R
Sbjct: 123 HTLSPLFKLCLLYGSPSASEALQGYAVKIGLQWDVFVAGALVNIYAKFQRIREARVLFDR 182
Query: 393 VPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSIL 441
+P +D+ +W+ M+ Y G GD+ L LF H GL+PD V +IL
Sbjct: 183 MPVRDVVLWNVMMKAYVEMGAGDEVLGLFSAF-HRSGLRPDCVSVRTIL 230
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 85/376 (22%), Positives = 161/376 (42%), Gaps = 41/376 (10%)
Query: 148 GISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGET--SIVSWTTIIGG 205
G H + GL N + + N++++MYAK G + AR +FD ++ +V++ I+
Sbjct: 32 GKRTHAVIVTSGL-NPDRYVTNNLITMYAKCGSLFSARKLFDITPQSDRDLVTYNAILAA 90
Query: 206 YVNVGNV------NEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLK 259
Y + G + +EAF + +R+ + L C G+ + ++ +K
Sbjct: 91 YAHTGELHDVEKTHEAFHIFRLLRQSVMLTTRHTLSPLFKLCLLYGSPSASEALQGYAVK 150
Query: 260 SGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNL 319
G + + LV++Y K + AR +FD + + V LW M+ Y ++G E + L
Sbjct: 151 IGLQWDVFVAGALVNIYAKFQRIREARVLFDRMPVRDVVLWNVMMKAYVEMGAGDEVLGL 210
Query: 320 FKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSK 379
F ++ +RP+ ++ T L + GK+ + LE R T L
Sbjct: 211 FSAFHRSGLRPDCVSVRTIL--------MGVGKKT---VFERELEQVRAYATKL------ 253
Query: 380 CGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKP-DAVVYT 438
F D D+ VW+ ++ Y G G +A++ F M ++ P D++ Y
Sbjct: 254 ----------FVCDDDSDVTVWNKTLSSYLQAGEGWEAVDCFRDM--IKSRVPCDSLTYI 301
Query: 439 SILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPV 498
ILS + ++ G ++ FG + + +++ +AG + A + +M
Sbjct: 302 VILSVVASLNHLELGKQIHGAV-VRFGWDQFVSVANSAINMYVKAGSVNYARRMFGQMK- 359
Query: 499 EVQAQVWAPLLSACMK 514
EV W ++S C +
Sbjct: 360 EVDLISWNTVISGCAR 375
>gi|225463844|ref|XP_002265179.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 617
Score = 353 bits (905), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 206/592 (34%), Positives = 339/592 (57%), Gaps = 19/592 (3%)
Query: 29 NSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDA--FVQTGLIDMYSKCSDFVSSRK 86
+ +F L+ C +I + K++H+ ++K DA + T L + ++ S + R
Sbjct: 21 HKLSFLSTLQTCKSIKGL---KQIHASIIKTMPSPDAQLTISTRLSALCAQ-SLPIDPRY 76
Query: 87 VLDEMP-VRLRSVVSWNSIISAHSRACLND--EAILVLKEMWVLGLELSASTFVSVVSGC 143
L + +R ++ +N+II + + ND E ++V K+M G+ T V+ C
Sbjct: 77 ALSLLAQLRTPNLPLYNAIIRGLATSN-NDSIEGLVVYKQMLSKGIVPDNYTIPFVLKAC 135
Query: 144 S----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSW 199
+ R+G +H K+GL + ++ ++N++M MYA + AR +FD + +VSW
Sbjct: 136 AESRAVREGEEVHGQAIKMGLAS-DVYVSNTLMRMYAVCDVIRSARKVFDTSPQRDLVSW 194
Query: 200 TTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLK 259
TT+I GYV +G E GL +M ++ D + + ++ CA++G+L L +H +++
Sbjct: 195 TTMIQGYVKMGFAREGVGLFFEMCGENLQADGMTLVIVLSSCARLGDLRLGRKLHRYIIR 254
Query: 260 SGYNNEDP-LDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVN 318
+ N D + N LV MY KCGD AR+VF + K+V W SMI G AQ G E++
Sbjct: 255 NSNVNLDVFVGNALVDMYLKCGDANFARKVFQEMPVKNVVSWNSMISGLAQKGQFKESLY 314
Query: 319 LFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFS 378
+F+++ + V+P++ TL L++CA LG L GK + Y+ N + ++ + +L+ M++
Sbjct: 315 MFRKMQRLGVKPDDVTLVAVLNSCANLGVLELGKWVHAYLDRNQIRADGFIGNALVDMYA 374
Query: 379 KCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYT 438
KCG I++A VF+ + KD+ ++AMI G A+HG G +AL+LF +M + G++PD V +
Sbjct: 375 KCGSIDQACWVFQAMNRKDVYSYTAMIVGLAMHGQGGKALDLFSEMPKM-GIEPDEVTFV 433
Query: 439 SILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPV 498
+L+ACSH G+V++G +F+ M + + + P +EHY C+VDLLGRAG + A + I MP+
Sbjct: 434 GVLTACSHVGLVEEGRKYFEDMSTIYNLRPQLEHYGCMVDLLGRAGLINEAEEFIRNMPI 493
Query: 499 EVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATA 558
E A V LL AC H VELGE K + + P G Y+LM+N+++SA W++A
Sbjct: 494 EPDAFVLGALLGACKIHGKVELGESVMKKIEKIEPRKDGAYVLMSNIYSSANRWRDALKL 553
Query: 559 RGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKEL--HIK 608
R M +R L K PG S +E+DG + F GD+SH +I K L E+ H+K
Sbjct: 554 RKTMKERNLEKTPGCSSIELDGVIHEFQKGDKSHPKIKEIYKLLDEIMSHLK 605
Score = 227 bits (579), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 138/463 (29%), Positives = 237/463 (51%), Gaps = 10/463 (2%)
Query: 5 STNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQD 64
+T+N E L Y ML G+ +++T P VLKACA ++ +G+ VH +K+G D
Sbjct: 100 ATSNNDSIEGLVVYKQMLSKGIVPDNYTIPFVLKACAESRAVREGEEVHGQAIKMGLASD 159
Query: 65 AFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEM 124
+V L+ MY+ C S+RKV D P R +VSW ++I + + E + + EM
Sbjct: 160 VYVSNTLMRMYAVCDVIRSARKVFDTSP--QRDLVSWTTMIQGYVKMGFAREGVGLFFEM 217
Query: 125 WVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGK 180
L+ T V V+S C+ R G +H + + +N ++ + N+++ MY K G
Sbjct: 218 CGENLQADGMTLVIVLSSCARLGDLRLGRKLHRYIIRNSNVNLDVFVGNALVDMYLKCGD 277
Query: 181 VNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILG 240
N AR +F E+ ++VSW ++I G G E+ + +M+R+ V PD V + ++
Sbjct: 278 ANFARKVFQEMPVKNVVSWNSMISGLAQKGQFKESLYMFRKMQRLGVKPDDVTLVAVLNS 337
Query: 241 CAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLW 300
CA +G L L +H+ L ++ + + N LV MY KCG ++ A VF A+ K V+ +
Sbjct: 338 CANLGVLELGKWVHAYLDRNQIRADGFIGNALVDMYAKCGSIDQACWVFQAMNRKDVYSY 397
Query: 301 TSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKE-IEEYIV 359
T+MI G A G +A++LF + K + P+E T L+AC+ +G + +G++ E+
Sbjct: 398 TAMIVGLAMHGQGGKALDLFSEMPKMGIEPDEVTFVGVLTACSHVGLVEEGRKYFEDMST 457
Query: 360 LNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVP-DKDLAVWSAMINGYAIHGMGDQAL 418
+ L + ++ + + G IN+A+E +P + D V A++ IHG +
Sbjct: 458 IYNLRPQLEHYGCMVDLLGRAGLINEAEEFIRNMPIEPDAFVLGALLGACKIHGKVELGE 517
Query: 419 NLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQ 461
++ K++ +E K A V S + S + D L K+M+
Sbjct: 518 SVMKKIEKIEPRKDGAYVLMS--NIYSSANRWRDALKLRKTMK 558
Score = 121 bits (304), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 73/250 (29%), Positives = 132/250 (52%), Gaps = 8/250 (3%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLK-V 59
MI+ G E + + M + + T +VL +CA + + G+++H ++++
Sbjct: 197 MIQGYVKMGFAREGVGLFFEMCGENLQADGMTLVIVLSSCARLGDLRLGRKLHRYIIRNS 256
Query: 60 GFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAIL 119
D FV L+DMY KC D +RKV EMPV ++VVSWNS+IS ++ E++
Sbjct: 257 NVNLDVFVGNALVDMYLKCGDANFARKVFQEMPV--KNVVSWNSMISGLAQKGQFKESLY 314
Query: 120 VLKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGLLNNEIP----LANSVMSMY 175
+ ++M LG++ T V+V++ C+ + + V+ L N+I + N+++ MY
Sbjct: 315 MFRKMQRLGVKPDDVTLVAVLNSCANLGVLELGKWVHAY-LDRNQIRADGFIGNALVDMY 373
Query: 176 AKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFL 235
AK G +++A +F + + S+T +I G G +A L ++M +M + PD V F+
Sbjct: 374 AKCGSIDQACWVFQAMNRKDVYSYTAMIVGLAMHGQGGKALDLFSEMPKMGIEPDEVTFV 433
Query: 236 NLILGCAQVG 245
++ C+ VG
Sbjct: 434 GVLTACSHVG 443
>gi|449468888|ref|XP_004152153.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Cucumis sativus]
gi|449515059|ref|XP_004164567.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Cucumis sativus]
Length = 721
Score = 353 bits (905), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 195/625 (31%), Positives = 339/625 (54%), Gaps = 8/625 (1%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+I + F E ++ + G N F F VLK ++ G+ VH VLKVG
Sbjct: 17 LIHGYAQSNKFIEAFELFARLHGEGHELNPFVFTTVLKLLVSMEWAELGRIVHGCVLKVG 76
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+ + F+ T LID YS +R+V DE + + +VSW +I++++ EA+
Sbjct: 77 YGSNTFIGTALIDAYSVSGCVSMAREVFDE--ISSKDMVSWTGMIASYAENDCFSEALEF 134
Query: 121 LKEMWVLGLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
+M V G + + TF V+ C +F G ++HC V K ++ + ++ +Y
Sbjct: 135 FSQMRVAGFKPNNFTFAGVLKACLGLQNFDAGKTVHCSVLKTNY-ERDLYVGVGLLELYT 193
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
+ G ++A F ++ + ++ W+ +I + G +A + QMRR V P+ F +
Sbjct: 194 RCGDNDDAWRAFGDMPKNDVIPWSFMISRFAQSGQSEKALEIFCQMRRAFVIPNQFTFSS 253
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
++ A + +L L+ ++H LK+G + + + N L++ Y KCG +E + +F+A+ +++
Sbjct: 254 VLQASADIESLDLSKTIHGHALKAGLSTDVFVSNALMACYAKCGCIEQSMELFEALSDRN 313
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEE 356
W ++I Y QLG A++LF +L+ V+ E T ++ L ACA L +L G ++
Sbjct: 314 DVSWNTIIVSYVQLGDGERALSLFSNMLRYQVQATEVTYSSILRACATLAALELGLQVHC 373
Query: 357 YIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQ 416
+ V +LI M++KCG I A+ +F+ + +D W+A+I GY++HG+G +
Sbjct: 374 LTAKTIYGQDVAVGNALIDMYAKCGSIKDARFMFDMLDLRDKVSWNAIICGYSMHGLGVE 433
Query: 417 ALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCL 476
A+ +F M+ + KPD + + +LSACS++G +D+G +F SM+ ++GIEP +EHY C+
Sbjct: 434 AIKMFNLMKETK-CKPDELTFVGVLSACSNTGRLDEGKQYFTSMKQDYGIEPCMEHYTCM 492
Query: 477 VDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGST 536
V L+GR+G D A+K I ++P E +W LL AC+ H++VELG +A+ +L L P
Sbjct: 493 VWLMGRSGNLDQAVKFIEDIPFEPSVMIWRALLGACVIHNDVELGRISAQRVLELEPRDE 552
Query: 537 GNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSV 596
+++L++N++ A W A R M + + KEPG S +E G+V F D SH
Sbjct: 553 ASHVLLSNIYARARRWGNVAYVRKHMKRKGVKKEPGLSWIENQGNVHCFTVADTSHADLK 612
Query: 597 DIRKTLKELHIKLLEAGYIAEADIV 621
I L+ L++K +AGY + + V
Sbjct: 613 LINGMLEFLNMKTRKAGYSPQLNAV 637
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 74/257 (28%), Positives = 125/257 (48%), Gaps = 1/257 (0%)
Query: 187 IFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGN 246
+FDE+ E + VS+ T+I GY EAF L ++ + VF ++ +
Sbjct: 2 VFDEMPERNTVSFVTLIHGYAQSNKFIEAFELFARLHGEGHELNPFVFTTVLKLLVSMEW 61
Query: 247 LFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGG 306
L +H +LK GY + + L+ Y+ G + +AR VFD + K + WT MI
Sbjct: 62 AELGRIVHGCVLKVGYGSNTFIGTALIDAYSVSGCVSMAREVFDEISSKDMVSWTGMIAS 121
Query: 307 YAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESN 366
YA+ SEA+ F ++ +PN T A L AC L + GK + ++ E +
Sbjct: 122 YAENDCFSEALEFFSQMRVAGFKPNNFTFAGVLKACLGLQNFDAGKTVHCSVLKTNYERD 181
Query: 367 RQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQH 426
V L+ ++++CG + A F +P D+ WS MI+ +A G ++AL +F +M+
Sbjct: 182 LYVGVGLLELYTRCGDNDDAWRAFGDMPKNDVIPWSFMISRFAQSGQSEKALEIFCQMRR 241
Query: 427 VEGLKPDAVVYTSILSA 443
+ P+ ++S+L A
Sbjct: 242 AFVI-PNQFTFSSVLQA 257
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 101/211 (47%), Gaps = 4/211 (1%)
Query: 288 VFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGS 347
VFD + E++ + ++I GYAQ EA LF RL N T L +
Sbjct: 2 VFDEMPERNTVSFVTLIHGYAQSNKFIEAFELFARLHGEGHELNPFVFTTVLKLLVSMEW 61
Query: 348 LSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMING 407
G+ + ++ G SN + T+LI +S G ++ A+EVF+ + KD+ W+ MI
Sbjct: 62 AELGRIVHGCVLKVGYGSNTFIGTALIDAYSVSGCVSMAREVFDEISSKDMVSWTGMIAS 121
Query: 408 YAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKS-MQSNFGI 466
YA + +AL F +M+ V G KP+ + +L AC D G + S +++N+
Sbjct: 122 YAENDCFSEALEFFSQMR-VAGFKPNNFTFAGVLKACLGLQNFDAGKTVHCSVLKTNY-- 178
Query: 467 EPSIEHYLCLVDLLGRAGRFDLALKTIHEMP 497
E + + L++L R G D A + +MP
Sbjct: 179 ERDLYVGVGLLELYTRCGDNDDAWRAFGDMP 209
>gi|225445374|ref|XP_002281645.1| PREDICTED: pentatricopeptide repeat-containing protein At5g55740,
chloroplastic-like [Vitis vinifera]
Length = 858
Score = 352 bits (904), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 205/623 (32%), Positives = 337/623 (54%), Gaps = 41/623 (6%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI NG +E + + M G+ T L A AN++++ +GK+ H+ +
Sbjct: 254 MIVGYVQNGLNQEAIDVFYDMRVEGIEPTRVTVASFLSASANLDALIEGKQGHAIAILNS 313
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
D + + +I+ YSK + V M + VV+WN +IS++ + +A+ +
Sbjct: 314 LDLDNILGSSIINFYSKVGLIEDAELVFSRM--LEKDVVTWNLLISSYVQHHQVGKALNM 371
Query: 121 LKEMWVLGLELSASTFVSVVSGCSFRQGISM----HC-CVYKLGLLNNEIPLANSVMSMY 175
M L + T S++S + I + HC C+ + L +++ +ANS++ MY
Sbjct: 372 CHLMRSENLRFDSVTLSSILSASAVTSNIKLGKEGHCYCIRRN--LESDVVVANSIIDMY 429
Query: 176 AKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFL 235
AK ++++AR +FD E +V W T++ Y VG EA L QM+ SV P+++ +
Sbjct: 430 AKCERIDDARKVFDSTTERDLVLWNTLLAAYAQVGLSGEALKLFYQMQFDSVPPNVISWN 489
Query: 236 NLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEK 295
++ILG + G + A M S + G+ +
Sbjct: 490 SVILGFLRNGQVNEAKDMFSQMQSLGF-------------------------------QP 518
Query: 296 SVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIE 355
++ WT++I G AQ G+ EA+ F+++ + +RP+ A++ + L AC ++ SL G+ I
Sbjct: 519 NLITWTTLISGLAQSGFGYEAILFFQKMQEAGIRPSIASITSVLLACTDIPSLWYGRAIH 578
Query: 356 EYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGD 415
+I + + V TSL+ M++KCG I++AK+VF + K+L +++AMI+ YA+HG
Sbjct: 579 GFITRHEFCLSVPVATSLVDMYAKCGSIDEAKKVFHMMSSKELPIYNAMISAYALHGQAV 638
Query: 416 QALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLC 475
+AL LF +Q EG++PD++ +TSILSACSH+G+V++GL+ F M S + P +EHY C
Sbjct: 639 EALALFKHLQK-EGIEPDSITFTSILSACSHAGLVNEGLNLFADMVSKHNMNPIMEHYGC 697
Query: 476 LVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGS 535
+V LL R G D AL+ I MP + A + LL+AC +HH +ELGEY +K+L L P +
Sbjct: 698 VVSLLSRCGNLDEALRLILTMPFQPDAHILGSLLTACREHHEIELGEYLSKHLFKLEPSN 757
Query: 536 TGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLS 595
+GNY+ ++N + +AG W E + R LM R L K PG S ++ G + VFVAGD SH +
Sbjct: 758 SGNYVALSNAYAAAGRWVEVSNMRDLMKVRGLRKNPGCSWIQTGGKLNVFVAGDGSHPKT 817
Query: 596 VDIRKTLKELHIKLLEAGYIAEA 618
+I L L ++ GY+ A
Sbjct: 818 EEIYAMLAMLLSEMRFMGYVPIA 840
Score = 211 bits (537), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 150/516 (29%), Positives = 252/516 (48%), Gaps = 51/516 (9%)
Query: 9 GSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQ 68
G E+ L + M + GV ++F P VLKAC ++ I GK VH +VLK+GF FV
Sbjct: 161 GFSEDALLGFIEMQENGVFPDNFVLPNVLKACGSLQLIGLGKGVHGYVLKMGFGACVFVS 220
Query: 69 TGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLG 128
+ L+DMY KC +RKV D M + +VV+WNS+I + + LN EAI V +M V G
Sbjct: 221 SSLVDMYGKCGVLEDARKVFDSMVEK--NVVTWNSMIVGYVQNGLNQEAIDVFYDMRVEG 278
Query: 129 LELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEA 184
+E + T S +S + +G H + L L+ + L +S+++ Y+K G + +A
Sbjct: 279 IEPTRVTVASFLSASANLDALIEGKQGHA-IAILNSLDLDNILGSSIINFYSKVGLIEDA 337
Query: 185 RSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQV 244
+F + E +V+W +I YV V +A +C+ MR ++ D V +++ A
Sbjct: 338 ELVFSRMLEKDVVTWNLLISSYVQHHQVGKALNMCHLMRSENLRFDSVTLSSILSASAVT 397
Query: 245 GNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMI 304
N+ L H ++ ++ + N ++ MY KC ++ AR+VFD+ E+ + LW +++
Sbjct: 398 SNIKLGKEGHCYCIRRNLESDVVVANSIIDMYAKCERIDDARKVFDSTTERDLVLWNTLL 457
Query: 305 GGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLE 364
YAQ+G EA+ LF ++ SV PN +
Sbjct: 458 AAYAQVGLSGEALKLFYQMQFDSVPPNVISW----------------------------- 488
Query: 365 SNRQVQTSLIHMFSKCGRINKAKEVFERVP----DKDLAVWSAMINGYAIHGMGDQALNL 420
S+I F + G++N+AK++F ++ +L W+ +I+G A G G +A+
Sbjct: 489 ------NSVILGFLRNGQVNEAKDMFSQMQSLGFQPNLITWTTLISGLAQSGFGYEAILF 542
Query: 421 FYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSM-QSNFGIEPSIEHYLCLVDL 479
F KMQ G++P TS+L AC+ + G + + + F + S+ LVD+
Sbjct: 543 FQKMQEA-GIRPSIASITSVLLACTDIPSLWYGRAIHGFITRHEFCL--SVPVATSLVDM 599
Query: 480 LGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKH 515
+ G D A K H M + + ++ ++SA H
Sbjct: 600 YAKCGSIDEAKKVFHMMSSK-ELPIYNAMISAYALH 634
Score = 209 bits (531), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 134/489 (27%), Positives = 253/489 (51%), Gaps = 11/489 (2%)
Query: 2 IRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG- 60
I + +G +E++ S M + +L+ C ++ G+++H+ +LK G
Sbjct: 51 ISSLCKDGHLQESVHLLSEMEFEDFQIGPEIYGELLQGCVYERALHTGQQIHARILKNGD 110
Query: 61 -FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAIL 119
F ++ +V+T L+ Y+KC + ++ + R+R+V SW +I+ R +++A+L
Sbjct: 111 FFAKNEYVETKLVVFYAKCDFPEVAVRLFHRL--RVRNVFSWAAIVGLQCRMGFSEDALL 168
Query: 120 VLKEMWVLGLELSASTFVSVVSGCSFRQ----GISMHCCVYKLGLLNNEIPLANSVMSMY 175
EM G+ +V+ C Q G +H V K+G + +++S++ MY
Sbjct: 169 GFIEMQENGVFPDNFVLPNVLKACGSLQLIGLGKGVHGYVLKMGF-GACVFVSSSLVDMY 227
Query: 176 AKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFL 235
K G + +AR +FD + E ++V+W ++I GYV G EA + MR + P V
Sbjct: 228 GKCGVLEDARKVFDSMVEKNVVTWNSMIVGYVQNGLNQEAIDVFYDMRVEGIEPTRVTVA 287
Query: 236 NLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEK 295
+ + A + L H++ + + + ++ L + +++ Y+K G +E A VF +LEK
Sbjct: 288 SFLSASANLDALIEGKQGHAIAILNSLDLDNILGSSIINFYSKVGLIEDAELVFSRMLEK 347
Query: 296 SVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIE 355
V W +I Y Q +A+N+ + ++R + TL++ LSA A ++ GKE
Sbjct: 348 DVVTWNLLISSYVQHHQVGKALNMCHLMRSENLRFDSVTLSSILSASAVTSNIKLGKEGH 407
Query: 356 EYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGD 415
Y + LES+ V S+I M++KC RI+ A++VF+ ++DL +W+ ++ YA G+
Sbjct: 408 CYCIRRNLESDVVVANSIIDMYAKCERIDDARKVFDSTTERDLVLWNTLLAAYAQVGLSG 467
Query: 416 QALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLC 475
+AL LFY+MQ + + P+ + + S++ +G V++ F MQS G +P++ +
Sbjct: 468 EALKLFYQMQ-FDSVPPNVISWNSVILGFLRNGQVNEAKDMFSQMQS-LGFQPNLITWTT 525
Query: 476 LVDLLGRAG 484
L+ L ++G
Sbjct: 526 LISGLAQSG 534
>gi|359486457|ref|XP_002275344.2| PREDICTED: pentatricopeptide repeat-containing protein At2g40720
[Vitis vinifera]
Length = 836
Score = 352 bits (903), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 207/612 (33%), Positives = 330/612 (53%), Gaps = 14/612 (2%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI NG +E++L YS S +F AC++ + G++VH V+K+
Sbjct: 215 MIGGFVENGMWEKSLELYSLAKNENCKLVSASFTGAFTACSHGEVLDFGRQVHCDVIKMN 274
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEM---PVRLRSVVSWNSIISAHSRACLNDEA 117
FQ D +V T L+ MY+K ++KV D++ V LR N++ISA +A
Sbjct: 275 FQDDPYVCTSLLTMYAKSGSVEDAKKVFDQVLDKEVELR-----NAMISAFIGNGRAYDA 329
Query: 118 ILVLKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMS 173
+ + +M + + T S++SGCS + G ++H V K + +N + + +++++
Sbjct: 330 LGLYNKMKAGETPVDSFTISSLLSGCSVVGSYDFGRTVHAEVIKRSMQSN-VAIQSALLT 388
Query: 174 MYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVV 233
MY K G +A S+F + E +V+W ++I G+ +A L M + V D V
Sbjct: 389 MYYKCGSTEDADSVFYTMKERDVVAWGSMIAGFCQNRRFKDALDLFRAMEKEGVKADSDV 448
Query: 234 FLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVL 293
++I + N+ L +H +K G ++ + LV MY+K G E A VF ++
Sbjct: 449 MTSVISAGLGLENVELGHLIHGFAIKRGLESDVFVACSLVDMYSKFGFAESAEMVFSSMP 508
Query: 294 EKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKE 353
K++ W SMI Y+ G P ++NL ++L+ + ++ T L A + + +L KGK
Sbjct: 509 NKNLVAWNSMISCYSWNGLPEMSINLLPQILQHGFYLDSVSITTVLVAVSSVAALLKGKT 568
Query: 354 IEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGM 413
+ Y + + S+ QV+ +LI M+ KCG + A+ +FE +P ++L W++MI GY HG
Sbjct: 569 LHAYQIRLQIPSDLQVENALIDMYVKCGCLKYAQLIFENMPRRNLVTWNSMIAGYGSHGN 628
Query: 414 GDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHY 473
++A+ LF +M+ E PD V + +++++CSHSGMV++GL+ F+ M+ +G+EP +EHY
Sbjct: 629 CEEAVRLFKEMKRSE-TAPDEVTFLALITSCSHSGMVEEGLNLFQLMRIEYGVEPRMEHY 687
Query: 474 LCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNP 533
+VDLLGRAGR D A I MP++ VW LL AC H N+ELGE A NLL + P
Sbjct: 688 ASVVDLLGRAGRLDDAYSFIRGMPIDADRSVWLCLLFACRAHRNMELGELVADNLLKMEP 747
Query: 534 GSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHH 593
NY+ + NL+ MW AA R M R L K PG S +E+ V VF +GD S
Sbjct: 748 ARGSNYVPLLNLYGEVEMWDRAANLRASMKGRGLKKSPGCSWIEVKNRVDVFFSGDSSST 807
Query: 594 LSVDIRKTLKEL 605
++I KTL L
Sbjct: 808 RRIEIYKTLSSL 819
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 126/500 (25%), Positives = 239/500 (47%), Gaps = 22/500 (4%)
Query: 2 IRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGF 61
I+ G + + L +S + + FTFP +LK CA++++++ G+ +H+ ++ +G
Sbjct: 27 IKALVQQGKYSQALELHSKTPHSALTTAKFTFPSLLKTCASLSNLYHGRTIHASIVTMGL 86
Query: 62 QQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRS---VVSWNSIISAHSRACLNDEAI 118
Q D ++ T LI+MY KC S+ +V D+M S + WN +I + + +E +
Sbjct: 87 QSDPYIATSLINMYVKCGLLGSALQVFDKMSESRDSAPDITVWNPVIDGYFKYGHFEEGL 146
Query: 119 LVLKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKF 178
M L ++ G +H + + + + L +++ MY+
Sbjct: 147 AQFCRMQELSWYMA---------------GRQIHGYIIR-NMFEGDPYLETALIGMYSSC 190
Query: 179 GKVNEARSIFDEI-GETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNL 237
+ EA S+F ++ ++IV+W +IGG+V G ++ L + + + F
Sbjct: 191 SRPMEAWSLFGKLENRSNIVAWNVMIGGFVENGMWEKSLELYSLAKNENCKLVSASFTGA 250
Query: 238 ILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSV 297
C+ L +H ++K + ++ + L++MY K G +E A++VFD VL+K V
Sbjct: 251 FTACSHGEVLDFGRQVHCDVIKMNFQDDPYVCTSLLTMYAKSGSVEDAKKVFDQVLDKEV 310
Query: 298 FLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEY 357
L +MI + G +A+ L+ ++ + T+++ LS C+ +GS G+ +
Sbjct: 311 ELRNAMISAFIGNGRAYDALGLYNKMKAGETPVDSFTISSLLSGCSVVGSYDFGRTVHAE 370
Query: 358 IVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQA 417
++ ++SN +Q++L+ M+ KCG A VF + ++D+ W +MI G+ + A
Sbjct: 371 VIKRSMQSNVAIQSALLTMYYKCGSTEDADSVFYTMKERDVVAWGSMIAGFCQNRRFKDA 430
Query: 418 LNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLV 477
L+LF M+ EG+K D+ V TS++SA V+ G G+E + LV
Sbjct: 431 LDLFRAMEK-EGVKADSDVMTSVISAGLGLENVELG-HLIHGFAIKRGLESDVFVACSLV 488
Query: 478 DLLGRAGRFDLALKTIHEMP 497
D+ + G + A MP
Sbjct: 489 DMYSKFGFAESAEMVFSSMP 508
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 72/131 (54%), Gaps = 5/131 (3%)
Query: 302 SMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLN 361
S I Q G S+A+ L + +++ + T + L CA L +L G+ I IV
Sbjct: 25 SKIKALVQQGKYSQALELHSKTPHSALTTAKFTFPSLLKTCASLSNLYHGRTIHASIVTM 84
Query: 362 GLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDK-----DLAVWSAMINGYAIHGMGDQ 416
GL+S+ + TSLI+M+ KCG + A +VF+++ + D+ VW+ +I+GY +G ++
Sbjct: 85 GLQSDPYIATSLINMYVKCGLLGSALQVFDKMSESRDSAPDITVWNPVIDGYFKYGHFEE 144
Query: 417 ALNLFYKMQHV 427
L F +MQ +
Sbjct: 145 GLAQFCRMQEL 155
>gi|297738890|emb|CBI28135.3| unnamed protein product [Vitis vinifera]
Length = 1974
Score = 352 bits (903), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 205/623 (32%), Positives = 337/623 (54%), Gaps = 41/623 (6%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI NG +E + + M G+ T L A AN++++ +GK+ H+ +
Sbjct: 1349 MIVGYVQNGLNQEAIDVFYDMRVEGIEPTRVTVASFLSASANLDALIEGKQGHAIAILNS 1408
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
D + + +I+ YSK + V M + VV+WN +IS++ + +A+ +
Sbjct: 1409 LDLDNILGSSIINFYSKVGLIEDAELVFSRM--LEKDVVTWNLLISSYVQHHQVGKALNM 1466
Query: 121 LKEMWVLGLELSASTFVSVVSGCSFRQGISM----HC-CVYKLGLLNNEIPLANSVMSMY 175
M L + T S++S + I + HC C+ + L +++ +ANS++ MY
Sbjct: 1467 CHLMRSENLRFDSVTLSSILSASAVTSNIKLGKEGHCYCIRRN--LESDVVVANSIIDMY 1524
Query: 176 AKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFL 235
AK ++++AR +FD E +V W T++ Y VG EA L QM+ SV P+++ +
Sbjct: 1525 AKCERIDDARKVFDSTTERDLVLWNTLLAAYAQVGLSGEALKLFYQMQFDSVPPNVISWN 1584
Query: 236 NLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEK 295
++ILG + G + A M S + G+ +
Sbjct: 1585 SVILGFLRNGQVNEAKDMFSQMQSLGF-------------------------------QP 1613
Query: 296 SVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIE 355
++ WT++I G AQ G+ EA+ F+++ + +RP+ A++ + L AC ++ SL G+ I
Sbjct: 1614 NLITWTTLISGLAQSGFGYEAILFFQKMQEAGIRPSIASITSVLLACTDIPSLWYGRAIH 1673
Query: 356 EYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGD 415
+I + + V TSL+ M++KCG I++AK+VF + K+L +++AMI+ YA+HG
Sbjct: 1674 GFITRHEFCLSVPVATSLVDMYAKCGSIDEAKKVFHMMSSKELPIYNAMISAYALHGQAV 1733
Query: 416 QALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLC 475
+AL LF +Q EG++PD++ +TSILSACSH+G+V++GL+ F M S + P +EHY C
Sbjct: 1734 EALALFKHLQK-EGIEPDSITFTSILSACSHAGLVNEGLNLFADMVSKHNMNPIMEHYGC 1792
Query: 476 LVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGS 535
+V LL R G D AL+ I MP + A + LL+AC +HH +ELGEY +K+L L P +
Sbjct: 1793 VVSLLSRCGNLDEALRLILTMPFQPDAHILGSLLTACREHHEIELGEYLSKHLFKLEPSN 1852
Query: 536 TGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLS 595
+GNY+ ++N + +AG W E + R LM R L K PG S ++ G + VFVAGD SH +
Sbjct: 1853 SGNYVALSNAYAAAGRWVEVSNMRDLMKVRGLRKNPGCSWIQTGGKLNVFVAGDGSHPKT 1912
Query: 596 VDIRKTLKELHIKLLEAGYIAEA 618
+I L L ++ GY+ A
Sbjct: 1913 EEIYAMLAMLLSEMRFMGYVPIA 1935
Score = 211 bits (536), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 148/515 (28%), Positives = 252/515 (48%), Gaps = 49/515 (9%)
Query: 9 GSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQ 68
G E+ L + M + GV ++F P VLKAC ++ I GK VH +VLK+GF FV
Sbjct: 1256 GFSEDALLGFIEMQENGVFPDNFVLPNVLKACGSLQLIGLGKGVHGYVLKMGFGACVFVS 1315
Query: 69 TGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLG 128
+ L+DMY KC +RKV D M + +VV+WNS+I + + LN EAI V +M V G
Sbjct: 1316 SSLVDMYGKCGVLEDARKVFDSMVEK--NVVTWNSMIVGYVQNGLNQEAIDVFYDMRVEG 1373
Query: 129 LELSASTFVSVVSGCSFRQGISMHCCVYKLGLLNN---EIPLANSVMSMYAKFGKVNEAR 185
+E + T S +S + + + + +LN+ + L +S+++ Y+K G + +A
Sbjct: 1374 IEPTRVTVASFLSASANLDALIEGKQGHAIAILNSLDLDNILGSSIINFYSKVGLIEDAE 1433
Query: 186 SIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVG 245
+F + E +V+W +I YV V +A +C+ MR ++ D V +++ A
Sbjct: 1434 LVFSRMLEKDVVTWNLLISSYVQHHQVGKALNMCHLMRSENLRFDSVTLSSILSASAVTS 1493
Query: 246 NLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIG 305
N+ L H ++ ++ + N ++ MY KC ++ AR+VFD+ E+ + LW +++
Sbjct: 1494 NIKLGKEGHCYCIRRNLESDVVVANSIIDMYAKCERIDDARKVFDSTTERDLVLWNTLLA 1553
Query: 306 GYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLES 365
YAQ+G EA+ LF ++ SV PN +
Sbjct: 1554 AYAQVGLSGEALKLFYQMQFDSVPPNVISW------------------------------ 1583
Query: 366 NRQVQTSLIHMFSKCGRINKAKEVFERVP----DKDLAVWSAMINGYAIHGMGDQALNLF 421
S+I F + G++N+AK++F ++ +L W+ +I+G A G G +A+ F
Sbjct: 1584 -----NSVILGFLRNGQVNEAKDMFSQMQSLGFQPNLITWTTLISGLAQSGFGYEAILFF 1638
Query: 422 YKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSM-QSNFGIEPSIEHYLCLVDLL 480
KMQ G++P TS+L AC+ + G + + + F + S+ LVD+
Sbjct: 1639 QKMQEA-GIRPSIASITSVLLACTDIPSLWYGRAIHGFITRHEFCL--SVPVATSLVDMY 1695
Query: 481 GRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKH 515
+ G D A K H M + + ++ ++SA H
Sbjct: 1696 AKCGSIDEAKKVFHMMSSK-ELPIYNAMISAYALH 1729
Score = 208 bits (530), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 134/489 (27%), Positives = 253/489 (51%), Gaps = 11/489 (2%)
Query: 2 IRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG- 60
I + +G +E++ S M + +L+ C ++ G+++H+ +LK G
Sbjct: 1146 ISSLCKDGHLQESVHLLSEMEFEDFQIGPEIYGELLQGCVYERALHTGQQIHARILKNGD 1205
Query: 61 -FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAIL 119
F ++ +V+T L+ Y+KC + ++ + R+R+V SW +I+ R +++A+L
Sbjct: 1206 FFAKNEYVETKLVVFYAKCDFPEVAVRLFHRL--RVRNVFSWAAIVGLQCRMGFSEDALL 1263
Query: 120 VLKEMWVLGLELSASTFVSVVSGCSFRQ----GISMHCCVYKLGLLNNEIPLANSVMSMY 175
EM G+ +V+ C Q G +H V K+G + +++S++ MY
Sbjct: 1264 GFIEMQENGVFPDNFVLPNVLKACGSLQLIGLGKGVHGYVLKMGF-GACVFVSSSLVDMY 1322
Query: 176 AKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFL 235
K G + +AR +FD + E ++V+W ++I GYV G EA + MR + P V
Sbjct: 1323 GKCGVLEDARKVFDSMVEKNVVTWNSMIVGYVQNGLNQEAIDVFYDMRVEGIEPTRVTVA 1382
Query: 236 NLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEK 295
+ + A + L H++ + + + ++ L + +++ Y+K G +E A VF +LEK
Sbjct: 1383 SFLSASANLDALIEGKQGHAIAILNSLDLDNILGSSIINFYSKVGLIEDAELVFSRMLEK 1442
Query: 296 SVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIE 355
V W +I Y Q +A+N+ + ++R + TL++ LSA A ++ GKE
Sbjct: 1443 DVVTWNLLISSYVQHHQVGKALNMCHLMRSENLRFDSVTLSSILSASAVTSNIKLGKEGH 1502
Query: 356 EYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGD 415
Y + LES+ V S+I M++KC RI+ A++VF+ ++DL +W+ ++ YA G+
Sbjct: 1503 CYCIRRNLESDVVVANSIIDMYAKCERIDDARKVFDSTTERDLVLWNTLLAAYAQVGLSG 1562
Query: 416 QALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLC 475
+AL LFY+MQ + + P+ + + S++ +G V++ F MQS G +P++ +
Sbjct: 1563 EALKLFYQMQ-FDSVPPNVISWNSVILGFLRNGQVNEAKDMFSQMQS-LGFQPNLITWTT 1620
Query: 476 LVDLLGRAG 484
L+ L ++G
Sbjct: 1621 LISGLAQSG 1629
>gi|242092246|ref|XP_002436613.1| hypothetical protein SORBIDRAFT_10g005800 [Sorghum bicolor]
gi|241914836|gb|EER87980.1| hypothetical protein SORBIDRAFT_10g005800 [Sorghum bicolor]
Length = 683
Score = 352 bits (903), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 194/552 (35%), Positives = 305/552 (55%), Gaps = 9/552 (1%)
Query: 29 NSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVL 88
+ F L LKAC G R+H +KVG D FV L+DMY+K D +RKV
Sbjct: 132 DDFVLSLALKACIRSADYGYGTRLHCDAVKVG-GADGFVMNSLVDMYAKAGDLECARKVF 190
Query: 89 DEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCS---- 144
+ +P R +VVSW S++S + + +L+ +M + S T +V++ CS
Sbjct: 191 ERIPGR--NVVSWTSMLSGCVQNGFAADGLLLFNKMRQDNVPPSEYTIATVITACSALIG 248
Query: 145 FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIG 204
QG MH V K GL++N ++ +++ MY K G++ +A+ +FDE+ +V WTT+I
Sbjct: 249 LHQGRWMHGSVIKQGLMSNSF-ISAALLDMYVKCGELEDAQCVFDELSYIDLVLWTTMIV 307
Query: 205 GYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNN 264
GY GN +A L + ++ P+ V ++ AQ+ +L L S+H + +K G
Sbjct: 308 GYTQNGNPLDALRLFLDKKFANIVPNSVTIATVLSASAQLRDLSLGRSIHGIAVKLGLVE 367
Query: 265 EDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLL 324
+ N LV MY KC + A R+F ++ K V W SM+ GYA+ ++A+ LFK++
Sbjct: 368 YTVVVNALVDMYAKCQAVSEANRIFGSISNKDVVAWNSMLSGYAENNMCNDALMLFKQMS 427
Query: 325 KTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRIN 384
P+ ++ LSA LG L GK Y V + SN V T+L+++++KCG +
Sbjct: 428 LKGPSPDAISVVHALSASVCLGDLLIGKSFHGYAVKHAFLSNIYVSTALLNLYNKCGDLP 487
Query: 385 KAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSAC 444
A+ VF+ + D++ W AMI GY + G +++LF +M +G+ P+ V +TSILS C
Sbjct: 488 SARRVFDEMNDRNSVTWCAMIGGYGMQGDSAGSIDLFGEMLK-DGVHPNDVAFTSILSTC 546
Query: 445 SHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQV 504
SH+GMV +F SM +F I PS++HY C+VD+L RAG + AL+ I MP++ V
Sbjct: 547 SHTGMVTAAKRYFDSMAQHFNITPSMKHYACMVDVLARAGNLEEALEFIDNMPMQADTSV 606
Query: 505 WAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDD 564
W L C H ++ GE A K ++ L+P Y+L++NL+TS GMW+++ R M +
Sbjct: 607 WGAFLHGCELHSRLQFGEEAIKRMMVLHPERPDLYVLISNLYTSNGMWEKSQAIRRWMQE 666
Query: 565 RRLTKEPGWSQV 576
+ L K PG+S +
Sbjct: 667 KGLVKLPGYSSI 678
Score = 189 bits (480), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 120/470 (25%), Positives = 233/470 (49%), Gaps = 17/470 (3%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
M+ NG + L ++ M Q V + +T V+ AC+ + + G+ +H V+K G
Sbjct: 204 MLSGCVQNGFAADGLLLFNKMRQDNVPPSEYTIATVITACSALIGLHQGRWMHGSVIKQG 263
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
++F+ L+DMY KC + ++ V DE+ +V W ++I +++ +A+ +
Sbjct: 264 LMSNSFISAALLDMYVKCGELEDAQCVFDELSY--IDLVLWTTMIVGYTQNGNPLDALRL 321
Query: 121 LKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
+ + ++ T +V+S + G S+H KLGL+ + + N+++ MYA
Sbjct: 322 FLDKKFANIVPNSVTIATVLSASAQLRDLSLGRSIHGIAVKLGLVEYTV-VVNALVDMYA 380
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K V+EA IF I +V+W +++ GY N+A L QM +PD + ++
Sbjct: 381 KCQAVSEANRIFGSISNKDVVAWNSMLSGYAENNMCNDALMLFKQMSLKGPSPDAISVVH 440
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
+ +G+L + S H +K + + + L+++Y KCGDL ARRVFD + +++
Sbjct: 441 ALSASVCLGDLLIGKSFHGYAVKHAFLSNIYVSTALLNLYNKCGDLPSARRVFDEMNDRN 500
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEE 356
W +MIGGY G + +++LF +LK V PN+ + LS C+ G ++ K +
Sbjct: 501 SVTWCAMIGGYGMQGDSAGSIDLFGEMLKDGVHPNDVAFTSILSTCSHTGMVTAAKRYFD 560
Query: 357 YIVLN-GLESNRQVQTSLIHMFSKCGRINKAKEVFERVP-DKDLAVWSAMINGYAIHG-- 412
+ + + + + ++ + ++ G + +A E + +P D +VW A ++G +H
Sbjct: 561 SMAQHFNITPSMKHYACMVDVLARAGNLEEALEFIDNMPMQADTSVWGAFLHGCELHSRL 620
Query: 413 -MGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQ 461
G++A+ +M + +PD +Y I + + +GM + + + MQ
Sbjct: 621 QFGEEAIK---RMMVLHPERPD--LYVLISNLYTSNGMWEKSQAIRRWMQ 665
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 128/401 (31%), Positives = 204/401 (50%), Gaps = 22/401 (5%)
Query: 68 QTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEM--- 124
+T L+ Y+ D S+R V D P S+ ++ +A + EA+ + ++M
Sbjct: 67 RTKLLSCYAALGDLASARMVFDGTP--RPDAYSYGVMLWCLVQAERHAEAVALHQDMRRR 124
Query: 125 ---------WVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGLLNNEIPLANSVMSMY 175
+VL L L A + + G +HC K+G + + NS++ MY
Sbjct: 125 RPCPEAQDDFVLSLALKA-----CIRSADYGYGTRLHCDAVKVGGADGFV--MNSLVDMY 177
Query: 176 AKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFL 235
AK G + AR +F+ I ++VSWT+++ G V G + L N+MR+ +V P
Sbjct: 178 AKAGDLECARKVFERIPGRNVVSWTSMLSGCVQNGFAADGLLLFNKMRQDNVPPSEYTIA 237
Query: 236 NLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEK 295
+I C+ + L MH ++K G + + L+ MY KCG+LE A+ VFD +
Sbjct: 238 TVITACSALIGLHQGRWMHGSVIKQGLMSNSFISAALLDMYVKCGELEDAQCVFDELSYI 297
Query: 296 SVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIE 355
+ LWT+MI GY Q G P +A+ LF ++ PN T+AT LSA A+L LS G+ I
Sbjct: 298 DLVLWTTMIVGYTQNGNPLDALRLFLDKKFANIVPNSVTIATVLSASAQLRDLSLGRSIH 357
Query: 356 EYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGD 415
V GL V +L+ M++KC +++A +F + +KD+ W++M++GYA + M +
Sbjct: 358 GIAVKLGLVEYTVVVNALVDMYAKCQAVSEANRIFGSISNKDVVAWNSMLSGYAENNMCN 417
Query: 416 QALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSF 456
AL LF +M ++G PDA+ LSA G + G SF
Sbjct: 418 DALMLFKQMS-LKGPSPDAISVVHALSASVCLGDLLIGKSF 457
Score = 145 bits (366), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 92/289 (31%), Positives = 148/289 (51%), Gaps = 7/289 (2%)
Query: 159 GLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGL 218
GLL + ++S YA G + AR +FD S+ ++ V EA L
Sbjct: 58 GLLLGSLRARTKLLSCYAALGDLASARMVFDGTPRPDAYSYGVMLWCLVQAERHAEAVAL 117
Query: 219 CNQMRRMSVTP----DLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVS 274
MRR P D V+ L L C + + +H +K G + + N LV
Sbjct: 118 HQDMRRRRPCPEAQDDFVLSLALK-ACIRSADYGYGTRLHCDAVKVG-GADGFVMNSLVD 175
Query: 275 MYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEAT 334
MY K GDLE AR+VF+ + ++V WTSM+ G Q G+ ++ + LF ++ + +V P+E T
Sbjct: 176 MYAKAGDLECARKVFERIPGRNVVSWTSMLSGCVQNGFAADGLLLFNKMRQDNVPPSEYT 235
Query: 335 LATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVP 394
+AT ++AC+ L L +G+ + ++ GL SN + +L+ M+ KCG + A+ VF+ +
Sbjct: 236 IATVITACSALIGLHQGRWMHGSVIKQGLMSNSFISAALLDMYVKCGELEDAQCVFDELS 295
Query: 395 DKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSA 443
DL +W+ MI GY +G AL LF + + P++V ++LSA
Sbjct: 296 YIDLVLWTTMIVGYTQNGNPLDALRLFLD-KKFANIVPNSVTIATVLSA 343
>gi|357131819|ref|XP_003567531.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g39530-like [Brachypodium distachyon]
Length = 822
Score = 352 bits (903), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 199/608 (32%), Positives = 334/608 (54%), Gaps = 8/608 (1%)
Query: 14 TLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLID 73
L + M GV + F + AC+ + + G++ H + ++ + DA V LID
Sbjct: 199 ALELFGKMGLDGVRPDRFVLASAVSACSALGFLEGGRQTHGYAYRIAVETDASVINALID 258
Query: 74 MYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVL----KEMWVLGL 129
+Y KCS +RK+ D M R++VSW ++I+ + + + EA+ + +E W +
Sbjct: 259 LYCKCSRLSLARKLFDCM--ENRNLVSWTTMIAGYMQNSCDAEAMAMFWQLSQEGWQPDV 316
Query: 130 ELSASTFVSVVSGCSFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFD 189
AS S S + QG +H K L ++E + NS++ MYAK + EAR++F+
Sbjct: 317 FACASILNSCGSLAAIWQGRQVHAHAIKANLESDEY-VKNSLIDMYAKCEHLTEARAVFE 375
Query: 190 EIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFL 249
+ E +S+ +I GY +G++ A + ++MR S+ P + F++L+ + + L
Sbjct: 376 ALAEDDAISYNAMIEGYSRLGDLAGAIDVFSKMRYCSLKPSPLTFVSLLGVSSSQSAIEL 435
Query: 250 ALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQ 309
+ +H L++KSG + + + L+ +Y+K +E A+ VF+ + + + +W +MI G AQ
Sbjct: 436 SKQIHGLIVKSGTSLDLYAGSSLIDVYSKFSLVEDAKAVFNLMHNRDMVIWNAMIFGLAQ 495
Query: 310 LGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQV 369
EAV LF +L + + PNE T ++ + L S+ G++ I+ G +S+ V
Sbjct: 496 NEQGEEAVKLFNQLQVSGLAPNEFTFVALVTVASTLVSMFHGQQFHAQIIKAGADSDHHV 555
Query: 370 QTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEG 429
+LI M++KCG I + + +FE KD+ W++MI+ YA HG ++AL +F +M G
Sbjct: 556 SNALIDMYAKCGFIKEGRLLFESTLGKDVICWNSMISTYAQHGQAEEALYVF-RMMGGTG 614
Query: 430 LKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLA 489
++P+ V + +LSAC+H+G+VD+GL F M++ + IEP EHY +V+L GR+G+ A
Sbjct: 615 VEPNYVTFVGVLSACAHAGLVDEGLRHFDFMKTKYAIEPGTEHYASVVNLFGRSGKLHAA 674
Query: 490 LKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSA 549
+ I MP+E A VW LLSAC NVE+G YA + L +P +G +LM+N++ S
Sbjct: 675 KEFIERMPIEPAAAVWRSLLSACHLFGNVEIGRYATEMALLADPADSGPSVLMSNIYASR 734
Query: 550 GMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKELHIKL 609
G+W +A R MD + KEPG+S +E+ V F+A R H + I L EL L
Sbjct: 735 GLWSDAQKLRQGMDCAGVVKEPGYSWIEVMKEVHTFIARGREHPEADVIYSLLDELTSIL 794
Query: 610 LEAGYIAE 617
GY+ +
Sbjct: 795 KNGGYLPD 802
Score = 204 bits (520), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 119/418 (28%), Positives = 218/418 (52%), Gaps = 9/418 (2%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI N E ++ + + Q G + F +L +C ++ +IW G++VH+H +K
Sbjct: 287 MIAGYMQNSCDAEAMAMFWQLSQEGWQPDVFACASILNSCGSLAAIWQGRQVHAHAIKAN 346
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+ D +V+ LIDMY+KC +R V + + +S+N++I +SR AI V
Sbjct: 347 LESDEYVKNSLIDMYAKCEHLTEARAVFEALAE--DDAISYNAMIEGYSRLGDLAGAIDV 404
Query: 121 LKEMWVLGLELSASTFVSVVSGCSFRQGISM----HCCVYKLGLLNNEIPLANSVMSMYA 176
+M L+ S TFVS++ S + I + H + K G + ++ +S++ +Y+
Sbjct: 405 FSKMRYCSLKPSPLTFVSLLGVSSSQSAIELSKQIHGLIVKSG-TSLDLYAGSSLIDVYS 463
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
KF V +A+++F+ + +V W +I G EA L NQ++ + P+ F+
Sbjct: 464 KFSLVEDAKAVFNLMHNRDMVIWNAMIFGLAQNEQGEEAVKLFNQLQVSGLAPNEFTFVA 523
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
L+ + + ++F H+ ++K+G +++ + N L+ MY KCG ++ R +F++ L K
Sbjct: 524 LVTVASTLVSMFHGQQFHAQIIKAGADSDHHVSNALIDMYAKCGFIKEGRLLFESTLGKD 583
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEE 356
V W SMI YAQ G EA+ +F+ + T V PN T LSACA G + +G +
Sbjct: 584 VICWNSMISTYAQHGQAEEALYVFRMMGGTGVEPNYVTFVGVLSACAHAGLVDEGLRHFD 643
Query: 357 YIVLN-GLESNRQVQTSLIHMFSKCGRINKAKEVFERVP-DKDLAVWSAMINGYAIHG 412
++ +E + S++++F + G+++ AKE ER+P + AVW ++++ + G
Sbjct: 644 FMKTKYAIEPGTEHYASVVNLFGRSGKLHAAKEFIERMPIEPAAAVWRSLLSACHLFG 701
Score = 201 bits (512), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 145/588 (24%), Positives = 285/588 (48%), Gaps = 34/588 (5%)
Query: 2 IRNSTNNGSFEETLSTYSSMLQT--GVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKV 59
I +G E+ ++ +++ + G N F L+ACA ++ G++VH +++
Sbjct: 84 ISMHAQHGCEEDAVALFAAFQRASGGEAPNEFLLASALRACAQSRAVSFGQQVHGVAVRI 143
Query: 60 GFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAIL 119
G + +V T LI++Y+K ++ V D +PV ++ V+W ++I+ +S+ A+
Sbjct: 144 GLDGNVYVGTALINLYAKVGCIDAAMLVFDALPV--KNPVTWTAVITGYSQIGQGGVALE 201
Query: 120 VLKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMY 175
+ +M + G+ S VS CS G H Y++ + + + N+++ +Y
Sbjct: 202 LFGKMGLDGVRPDRFVLASAVSACSALGFLEGGRQTHGYAYRIA-VETDASVINALIDLY 260
Query: 176 AKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFL 235
K +++ AR +FD + ++VSWTT+I GY+ EA + Q+ + PD+
Sbjct: 261 CKCSRLSLARKLFDCMENRNLVSWTTMIAGYMQNSCDAEAMAMFWQLSQEGWQPDVFACA 320
Query: 236 NLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEK 295
+++ C + ++ +H+ +K+ +++ + N L+ MY KC L AR VF+A+ E
Sbjct: 321 SILNSCGSLAAIWQGRQVHAHAIKANLESDEYVKNSLIDMYAKCEHLTEARAVFEALAED 380
Query: 296 SVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIE 355
+ +MI GY++LG + A+++F ++ S++P+ T + L + ++ K+I
Sbjct: 381 DAISYNAMIEGYSRLGDLAGAIDVFSKMRYCSLKPSPLTFVSLLGVSSSQSAIELSKQIH 440
Query: 356 EYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGD 415
IV +G + +SLI ++SK + AK VF + ++D+ +W+AMI G A + G+
Sbjct: 441 GLIVKSGTSLDLYAGSSLIDVYSKFSLVEDAKAVFNLMHNRDMVIWNAMIFGLAQNEQGE 500
Query: 416 QALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGI---EPSIEH 472
+A+ LF ++Q V GL P+ + ++++ S +S F Q + I +H
Sbjct: 501 EAVKLFNQLQ-VSGLAPNEFTFVALVTVASTL------VSMFHGQQFHAQIIKAGADSDH 553
Query: 473 YL--CLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLT 530
++ L+D+ + G F + + E + W ++S +H E Y + +
Sbjct: 554 HVSNALIDMYAKCG-FIKEGRLLFESTLGKDVICWNSMISTYAQHGQAEEALYVFRMM-- 610
Query: 531 LNPGSTG---NYILMANLFTS---AGMWKEAATARGLMDDRRLTKEPG 572
G TG NY+ + ++ AG+ E M + EPG
Sbjct: 611 ---GGTGVEPNYVTFVGVLSACAHAGLVDEGLRHFDFM-KTKYAIEPG 654
Score = 188 bits (478), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 112/405 (27%), Positives = 210/405 (51%), Gaps = 10/405 (2%)
Query: 53 HSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRAC 112
H+ + G D F+ L+ YSK +R++ D MP +++VSW S IS H++
Sbjct: 34 HARAVVTGALPDLFLANLLLRAYSKLGRVRDARRLFDRMP--HKNLVSWGSAISMHAQHG 91
Query: 113 LNDEAILVLKEMWVLGLELSASTFV--SVVSGCSFRQGIS----MHCCVYKLGLLNNEIP 166
++A+ + + + F+ S + C+ + +S +H ++GL N +
Sbjct: 92 CEEDAVALFAAFQRASGGEAPNEFLLASALRACAQSRAVSFGQQVHGVAVRIGLDGN-VY 150
Query: 167 LANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMS 226
+ +++++YAK G ++ A +FD + + V+WT +I GY +G A L +M
Sbjct: 151 VGTALINLYAKVGCIDAAMLVFDALPVKNPVTWTAVITGYSQIGQGGVALELFGKMGLDG 210
Query: 227 VTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELAR 286
V PD V + + C+ +G L H + + + N L+ +Y KC L LAR
Sbjct: 211 VRPDRFVLASAVSACSALGFLEGGRQTHGYAYRIAVETDASVINALIDLYCKCSRLSLAR 270
Query: 287 RVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELG 346
++FD + +++ WT+MI GY Q +EA+ +F +L + +P+ A+ L++C L
Sbjct: 271 KLFDCMENRNLVSWTTMIAGYMQNSCDAEAMAMFWQLSQEGWQPDVFACASILNSCGSLA 330
Query: 347 SLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMIN 406
++ +G+++ + + LES+ V+ SLI M++KC + +A+ VFE + + D ++AMI
Sbjct: 331 AIWQGRQVHAHAIKANLESDEYVKNSLIDMYAKCEHLTEARAVFEALAEDDAISYNAMIE 390
Query: 407 GYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVD 451
GY+ G A+++F KM++ LKP + + S+L S ++
Sbjct: 391 GYSRLGDLAGAIDVFSKMRYCS-LKPSPLTFVSLLGVSSSQSAIE 434
>gi|359472776|ref|XP_002275546.2| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Vitis vinifera]
Length = 896
Score = 352 bits (903), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 208/641 (32%), Positives = 343/641 (53%), Gaps = 33/641 (5%)
Query: 11 FEETLSTYSSMLQTGVHGNSFTFPLVLKACANI---NSIWDGKRVHSHVLKVGFQQDAFV 67
+E+ L + +M + +SFT V AC+N+ + + GK++H + L+VG Q F
Sbjct: 175 WEQALEAFRAMQMENMELSSFTLVSVALACSNLGVMHGLRLGKQLHGYSLRVG-DQKTFT 233
Query: 68 QTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVL 127
L+ MY+K V K L E V R +VSWN++IS+ S++ EA+ + M +
Sbjct: 234 NNALMAMYAKLGR-VDDSKALFESFVD-RDMVSWNTMISSFSQSDRFSEALAFFRLMVLE 291
Query: 128 GLELSASTFVSVVSGCSFRQGISMHCCVYKLGLLNNEIP----LANSVMSMYAKFGKVNE 183
G+EL T SV+ CS + + + ++ L NN++ + ++++ MY +V
Sbjct: 292 GVELDGVTIASVLPACSHLERLDVGKEIHAYVLRNNDLIENSFVGSALVDMYCNCRQVES 351
Query: 184 ARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMS-VTPDLVVFLNLILGCA 242
R +FD I I W +I GY G +A L +M +++ + P+ +++ C
Sbjct: 352 GRRVFDHILGRRIELWNAMISGYARNGLDEKALILFIEMIKVAGLLPNTTTMASVMPACV 411
Query: 243 QVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTS 302
S+H +K G+ + + N L+ MY++ G ++++ +FD++ + W +
Sbjct: 412 HCEAFSNKESIHGYAVKLGFKEDRYVQNALMDMYSRMGKMDISETIFDSMEVRDRVSWNT 471
Query: 303 MIGGYAQLGYPSEAVNLFKRLLKTS-----------------VRPNEATLATTLSACAEL 345
MI GY G S A+ L + + +PN TL T L CA L
Sbjct: 472 MITGYVLSGRYSNALVLLHEMQRMENTKDVKKDDNDDEKGGPYKPNAITLMTVLPGCAAL 531
Query: 346 GSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMI 405
+++KGKEI Y + N L S+ V ++L+ M++KCG +N ++ VF +P+K++ W+ +I
Sbjct: 532 AAIAKGKEIHAYAIRNMLASDITVGSALVDMYAKCGCLNLSRRVFNEMPNKNVITWNVLI 591
Query: 406 NGYAIHGMGDQALNLFYKMQHVEG----LKPDAVVYTSILSACSHSGMVDDGLSFFKSMQ 461
+HG G++AL LF M G KP+ V + ++ +ACSHSG++ +GL+ F M+
Sbjct: 592 MACGMHGKGEEALELFKNMVAEAGRGGEAKPNEVTFITVFAACSHSGLISEGLNLFYRMK 651
Query: 462 SNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEV-QAQVWAPLLSACMKHHNVEL 520
+ G+EP+ +HY C+VDLLGRAG+ + A + ++ MP E + W+ LL AC H NVEL
Sbjct: 652 HDHGVEPTSDHYACVVDLLGRAGQLEEAYELVNTMPAEFDKVGAWSSLLGACRIHQNVEL 711
Query: 521 GEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDG 580
GE AAKNLL L P +Y+L++N+++SAG+W +A R M + KEPG S +E
Sbjct: 712 GEVAAKNLLHLEPNVASHYVLLSNIYSSAGLWNKAMEVRKNMRQMGVKKEPGCSWIEFRD 771
Query: 581 SVQVFVAGDRSHHLSVDIRKTLKELHIKLLEAGYIAEADIV 621
V F+AGD SH S + L+ L K+ + GY+ + V
Sbjct: 772 EVHKFMAGDVSHPQSEQLHGFLETLSEKMRKEGYVPDTSCV 812
Score = 246 bits (628), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 161/558 (28%), Positives = 275/558 (49%), Gaps = 40/558 (7%)
Query: 2 IRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGF 61
+R+ T + F E +STY M +G ++F FP VLKA + + + G+++H+ +K G+
Sbjct: 64 LRSRTRSNDFREAISTYIEMTVSGARPDNFAFPAVLKAVSGLQDLKTGEQIHAAAVKFGY 123
Query: 62 QQDAF-VQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+ V L++MY KC KV D + R VSWNS I+A R ++A+
Sbjct: 124 GSSSVTVANTLVNMYGKCGGIGDVCKVFDR--ITDRDQVSWNSFIAALCRFEKWEQALEA 181
Query: 121 LKEMWVLGLELSASTFVSVVSGCS-------FRQGISMHCCVYKLGLLNNEIPLANSVMS 173
+ M + +ELS+ T VSV CS R G +H Y L + + + N++M+
Sbjct: 182 FRAMQMENMELSSFTLVSVALACSNLGVMHGLRLGKQLHG--YSLRVGDQKTFTNNALMA 239
Query: 174 MYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVV 233
MYAK G+V++++++F+ + +VSW T+I + +EA M V D V
Sbjct: 240 MYAKLGRVDDSKALFESFVDRDMVSWNTMISSFSQSDRFSEALAFFRLMVLEGVELDGVT 299
Query: 234 FLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDN-----LLVSMYTKCGDLELARRV 288
+++ C+ + L + +H+ +L+ N D ++N LV MY C +E RRV
Sbjct: 300 IASVLPACSHLERLDVGKEIHAYVLR----NNDLIENSFVGSALVDMYCNCRQVESGRRV 355
Query: 289 FDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTS-VRPNEATLATTLSACAELGS 347
FD +L + + LW +MI GYA+ G +A+ LF ++K + + PN T+A+ + AC +
Sbjct: 356 FDHILGRRIELWNAMISGYARNGLDEKALILFIEMIKVAGLLPNTTTMASVMPACVHCEA 415
Query: 348 LSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMING 407
S + I Y V G + +R VQ +L+ M+S+ G+++ ++ +F+ + +D W+ MI G
Sbjct: 416 FSNKESIHGYAVKLGFKEDRYVQNALMDMYSRMGKMDISETIFDSMEVRDRVSWNTMITG 475
Query: 408 YAIHGMGDQALNLFYKMQHVEG----------------LKPDAVVYTSILSACSHSGMVD 451
Y + G AL L ++MQ +E KP+A+ ++L C+ +
Sbjct: 476 YVLSGRYSNALVLLHEMQRMENTKDVKKDDNDDEKGGPYKPNAITLMTVLPGCAALAAIA 535
Query: 452 DGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSA 511
G N + I LVD+ + G +L+ + +EMP + W L+ A
Sbjct: 536 KGKEIHAYAIRNM-LASDITVGSALVDMYAKCGCLNLSRRVFNEMPNK-NVITWNVLIMA 593
Query: 512 CMKHHNVELGEYAAKNLL 529
C H E KN++
Sbjct: 594 CGMHGKGEEALELFKNMV 611
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 137/497 (27%), Positives = 251/497 (50%), Gaps = 46/497 (9%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI + + + F E L+ + M+ GV + T VL AC+++ + GK +H++VL+
Sbjct: 268 MISSFSQSDRFSEALAFFRLMVLEGVELDGVTIASVLPACSHLERLDVGKEIHAYVLRNN 327
Query: 61 -FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAIL 119
+++FV + L+DMY C S R+V D + R + WN++IS ++R L+++A++
Sbjct: 328 DLIENSFVGSALVDMYCNCRQVESGRRVFDH--ILGRRIELWNAMISGYARNGLDEKALI 385
Query: 120 VLKEMW-VLGLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSM 174
+ EM V GL + +T SV+ C +F S+H KLG + + N++M M
Sbjct: 386 LFIEMIKVAGLLPNTTTMASVMPACVHCEAFSNKESIHGYAVKLGFKEDRY-VQNALMDM 444
Query: 175 YAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVT------ 228
Y++ GK++ + +IFD + VSW T+I GYV G + A L ++M+RM T
Sbjct: 445 YSRMGKMDISETIFDSMEVRDRVSWNTMITGYVLSGRYSNALVLLHEMQRMENTKDVKKD 504
Query: 229 -----------PDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYT 277
P+ + + ++ GCA + + +H+ +++ ++ + + LV MY
Sbjct: 505 DNDDEKGGPYKPNAITLMTVLPGCAALAAIAKGKEIHAYAIRNMLASDITVGSALVDMYA 564
Query: 278 KCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVR-----PNE 332
KCG L L+RRVF+ + K+V W +I G EA+ LFK ++ + R PNE
Sbjct: 565 KCGCLNLSRRVFNEMPNKNVITWNVLIMACGMHGKGEEALELFKNMVAEAGRGGEAKPNE 624
Query: 333 ATLATTLSACAELGSLSKGKEIEEYIVLN-GLESNRQVQTSLIHMFSKCGRINKAKEVFE 391
T T +AC+ G +S+G + + + G+E ++ + + G++ +A E+
Sbjct: 625 VTFITVFAACSHSGLISEGLNLFYRMKHDHGVEPTSDHYACVVDLLGRAGQLEEAYELVN 684
Query: 392 RVPDK--DLAVWSAMINGYAIHG---MGD-QALNLFYKMQHVEGLKPDAVVYTSILSAC- 444
+P + + WS+++ IH +G+ A NL + L+P+ + +LS
Sbjct: 685 TMPAEFDKVGAWSSLLGACRIHQNVELGEVAAKNLLH-------LEPNVASHYVLLSNIY 737
Query: 445 SHSGMVDDGLSFFKSMQ 461
S +G+ + + K+M+
Sbjct: 738 SSAGLWNKAMEVRKNMR 754
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 109/412 (26%), Positives = 205/412 (49%), Gaps = 12/412 (2%)
Query: 96 RSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCS----FRQGISM 151
RS SW + + +R+ EAI EM V G F +V+ S + G +
Sbjct: 55 RSTASWVDALRSRTRSNDFREAISTYIEMTVSGARPDNFAFPAVLKAVSGLQDLKTGEQI 114
Query: 152 HCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGN 211
H K G ++ + +AN++++MY K G + + +FD I + VSW + I
Sbjct: 115 HAAAVKFGYGSSSVTVANTLVNMYGKCGGIGDVCKVFDRITDRDQVSWNSFIAALCRFEK 174
Query: 212 VNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVG---NLFLALSMHSLLLKSGYNNEDPL 268
+A M+ ++ +++ L C+ +G L L +H L+ G + +
Sbjct: 175 WEQALEAFRAMQMENMELSSFTLVSVALACSNLGVMHGLRLGKQLHGYSLRVG-DQKTFT 233
Query: 269 DNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSV 328
+N L++MY K G ++ ++ +F++ +++ + W +MI ++Q SEA+ F+ ++ V
Sbjct: 234 NNALMAMYAKLGRVDDSKALFESFVDRDMVSWNTMISSFSQSDRFSEALAFFRLMVLEGV 293
Query: 329 RPNEATLATTLSACAELGSLSKGKEIEEYIVLNG-LESNRQVQTSLIHMFSKCGRINKAK 387
+ T+A+ L AC+ L L GKEI Y++ N L N V ++L+ M+ C ++ +
Sbjct: 294 ELDGVTIASVLPACSHLERLDVGKEIHAYVLRNNDLIENSFVGSALVDMYCNCRQVESGR 353
Query: 388 EVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHS 447
VF+ + + + +W+AMI+GYA +G+ ++AL LF +M V GL P+ S++ AC H
Sbjct: 354 RVFDHILGRRIELWNAMISGYARNGLDEKALILFIEMIKVAGLLPNTTTMASVMPACVHC 413
Query: 448 GMVDDGLSFFK-SMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPV 498
+ S +++ F + +++ L+D+ R G+ D++ M V
Sbjct: 414 EAFSNKESIHGYAVKLGFKEDRYVQN--ALMDMYSRMGKMDISETIFDSMEV 463
>gi|92429671|gb|ABE77204.1| unknown [Sorghum bicolor]
Length = 795
Score = 352 bits (902), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 184/604 (30%), Positives = 329/604 (54%), Gaps = 7/604 (1%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MIR + + L+ Y +ML G + FTFP+VLK CA ++ +G+ H+ V+K+G
Sbjct: 91 MIRGFADADLPLDALAAYRAMLDAGARPDRFTFPVVLKCCARAGALGEGRAAHAAVIKLG 150
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
D + L+ +Y+K + +V D MP R +VSWN+++ + + A+
Sbjct: 151 LGADVYTANSLVALYAKLGLVGDAERVFDGMPAR--DIVSWNTMVDGYVSNGMGALALAC 208
Query: 121 LKEMW-VLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGL---LNNEIPLANSVMSMYA 176
+EM L + + ++ ++ C +++ ++ + L ++ + S++ MY
Sbjct: 209 FREMNDALQVGHDSVGVIAALAACCLESALALGREIHGYAIRHGLEQDVKVGTSLVDMYC 268
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K G V A ++F ++ ++V+W +IGGY +AF QMR ++V +N
Sbjct: 269 KCGNVFFAENVFAKMPLRTVVTWNCMIGGYALNERPVDAFDCFMQMRVDGFQVEVVTAIN 328
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
L+ CAQ + S+H+ +++ + L+ L+ MY K G +E + ++F + +K+
Sbjct: 329 LLTACAQTESSLFGRSVHAYVVRRHFLPHVVLETALLEMYGKVGKVESSEKIFGQITDKT 388
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEE 356
+ W +MI Y + EA+ LF LL + P+ T+ T + A LGS+ + K++
Sbjct: 389 LVSWNNMIAAYMYMEMYQEAIALFLELLNQPLYPDYFTMTTVVPAFVLLGSIRQCKQMHS 448
Query: 357 YIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQ 416
YIV G + + +++HM+++CG I ++E+F+++P KD+ W+ +I GYAIHG G
Sbjct: 449 YIVKLGYGDSTLIMNAVMHMYARCGNIVASREIFDKMPGKDVISWNTIIIGYAIHGQGKI 508
Query: 417 ALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCL 476
AL +F +M+ G++P+ + S+L+ACS SG+ +G F SMQ +G+ P IEHY C+
Sbjct: 509 ALEMFDEMK-CSGMEPNESTFVSVLTACSVSGLEAEGWKEFNSMQQEYGMIPQIEHYGCM 567
Query: 477 VDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGST 536
DLLGRAG L+ I MP+ +++W LL+A +++++ EYAA+ + L +T
Sbjct: 568 TDLLGRAGELREVLRFIENMPIAPTSRIWGSLLTASRNKNDIDIAEYAAERIFQLEHNNT 627
Query: 537 GNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSV 596
G Y+++++++ AG W++ R LM ++ L + S VE++ FV GD SH S
Sbjct: 628 GCYVVLSSMYADAGRWEDVERIRSLMKEKGLRRTEARSLVELNNKECSFVNGDMSHPQSE 687
Query: 597 DIRK 600
I +
Sbjct: 688 KIHE 691
Score = 125 bits (315), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 75/270 (27%), Positives = 135/270 (50%), Gaps = 2/270 (0%)
Query: 179 GKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLI 238
G+++EA F + +I G+ + +A M PD F ++
Sbjct: 68 GRMDEAADAFAGVTRPGAFLHNVMIRGFADADLPLDALAAYRAMLDAGARPDRFTFPVVL 127
Query: 239 LGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVF 298
CA+ G L + H+ ++K G + N LV++Y K G + A RVFD + + +
Sbjct: 128 KCCARAGALGEGRAAHAAVIKLGLGADVYTANSLVALYAKLGLVGDAERVFDGMPARDIV 187
Query: 299 LWTSMIGGYAQLGYPSEAVNLFKRLLKT-SVRPNEATLATTLSACAELGSLSKGKEIEEY 357
W +M+ GY G + A+ F+ + V + + L+AC +L+ G+EI Y
Sbjct: 188 SWNTMVDGYVSNGMGALALACFREMNDALQVGHDSVGVIAALAACCLESALALGREIHGY 247
Query: 358 IVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQA 417
+ +GLE + +V TSL+ M+ KCG + A+ VF ++P + + W+ MI GYA++ A
Sbjct: 248 AIRHGLEQDVKVGTSLVDMYCKCGNVFFAENVFAKMPLRTVVTWNCMIGGYALNERPVDA 307
Query: 418 LNLFYKMQHVEGLKPDAVVYTSILSACSHS 447
+ F +M+ V+G + + V ++L+AC+ +
Sbjct: 308 FDCFMQMR-VDGFQVEVVTAINLLTACAQT 336
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 109/232 (46%), Gaps = 7/232 (3%)
Query: 272 LVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPN 331
L+ + G ++ A F V FL MI G+A P +A+ ++ +L RP+
Sbjct: 60 LILSHVAAGRMDEAADAFAGVTRPGAFLHNVMIRGFADADLPLDALAAYRAMLDAGARPD 119
Query: 332 EATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFE 391
T L CA G+L +G+ ++ GL ++ SL+ +++K G + A+ VF+
Sbjct: 120 RFTFPVVLKCCARAGALGEGRAAHAAVIKLGLGADVYTANSLVALYAKLGLVGDAERVFD 179
Query: 392 RVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVD 451
+P +D+ W+ M++GY +GMG AL F +M + D+V + L+AC ++
Sbjct: 180 GMPARDIVSWNTMVDGYVSNGMGALALACFREMNDALQVGHDSVGVIAALAACC----LE 235
Query: 452 DGLSFFKSMQS---NFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEV 500
L+ + + G+E ++ LVD+ + G A +MP+
Sbjct: 236 SALALGREIHGYAIRHGLEQDVKVGTSLVDMYCKCGNVFFAENVFAKMPLRT 287
>gi|326509211|dbj|BAJ91522.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 878
Score = 352 bits (902), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 211/647 (32%), Positives = 332/647 (51%), Gaps = 37/647 (5%)
Query: 11 FEETLSTYSSMLQTGVHG-NSFTFPLVLKACANINSIWDGKRV----HSHVLKVGF---Q 62
+E L ML G H +SFT VL AC+++ DG+R+ H+ LK GF
Sbjct: 149 WERALDALRDMLAEGRHDVSSFTLVSVLLACSHLPGD-DGRRLGREAHAFALKRGFLDEG 207
Query: 63 QDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLR----SVVSWNSIISAHSRACLNDEAI 118
++ F L+ MY++ ++ + VV+WN++IS + EA+
Sbjct: 208 RERFPFNALLSMYARLGLVDDAQSLFRTTAAAFSPGGGDVVTWNTMISLLVQGGRCAEAV 267
Query: 119 LVLKEMWVLGLELSASTFVSVVSGCSFRQ----GISMHCCVYKLGLLNNEIPLANSVMSM 174
VL +M LG+ TF S + CS + G MH V K L +A++++ M
Sbjct: 268 EVLYDMVSLGVRPDGVTFASALPACSRLEMLALGREMHAVVLKDADLAANSFVASALVDM 327
Query: 175 YAKFGKVNEARSIFDEIGETS--IVSWTTIIGGYVNVGNVNEAFGLCNQMR-RMSVTPDL 231
YA KV AR +FD + E S + W +I GY G EA L ++M P
Sbjct: 328 YAGNEKVASARRVFDMVPEPSRQLGMWNAMICGYAQAGMDEEALELFSRMEAEAGCAPSE 387
Query: 232 VVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDA 291
++ CA+ +MH ++K G + N L+ MY + G++++ARR+F
Sbjct: 388 TTMSGVLPACARSEGFAGKEAMHGYVVKRGMAGNRFVQNALMDMYARLGEMDVARRIFAM 447
Query: 292 VLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLL----------------KTSVRPNEATL 335
+ + V W ++I G G+ +EA L + PN TL
Sbjct: 448 IDPRDVVSWNTLITGCVVQGHAAEAFQLVTEMQLPSPSPSSSSTTEEGEAHRCMPNNITL 507
Query: 336 ATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPD 395
T L CA L + ++GKEI Y V + LES+ V ++L+ M++KCG + ++ VF+R+P
Sbjct: 508 MTLLPGCAALAAPARGKEIHGYAVRHALESDIAVGSALVDMYAKCGCLAASRAVFDRLPR 567
Query: 396 KDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLS 455
+++ W+ +I Y +HG+GD+A+ LF +M P+ V + + L+ACSHSG+VD GL
Sbjct: 568 RNVITWNVLIMAYGMHGLGDEAVALFDEMAAGGEATPNEVTFIAALAACSHSGLVDRGLE 627
Query: 456 FFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEM-PVEVQAQVWAPLLSACMK 514
F M+ + G++P+ + + C+VD+LGRAGR D A I M P E Q W+ LL AC
Sbjct: 628 LFHGMERDHGVKPTPDLHACVVDVLGRAGRLDEAYSIITSMEPGEQQVSAWSSLLGACRL 687
Query: 515 HHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWS 574
H NVELGE AA+ L L PG +Y+L+ N++++AGMW ++ R M + + KEPG S
Sbjct: 688 HRNVELGEVAAERLFELEPGEASHYVLLCNIYSAAGMWDKSVAVRVRMRRQGVAKEPGCS 747
Query: 575 QVEIDGSVQVFVAGDRSHHLSVDIRKTLKELHIKLLEAGYIAEADIV 621
+E+DG++ F+AG+ SH S ++ + L ++ GY + V
Sbjct: 748 WIELDGAIHRFMAGESSHPASAEVHAHMDALWERMRREGYAPDTSCV 794
Score = 188 bits (477), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 148/571 (25%), Positives = 261/571 (45%), Gaps = 64/571 (11%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLK-V 59
MI G E + M+ GV + TF L AC+ + + G+ +H+ VLK
Sbjct: 253 MISLLVQGGRCAEAVEVLYDMVSLGVRPDGVTFASALPACSRLEMLALGREMHAVVLKDA 312
Query: 60 GFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAIL 119
++FV + L+DMY+ S+R+V D +P R + WN++I +++A +++EA+
Sbjct: 313 DLAANSFVASALVDMYAGNEKVASARRVFDMVPEPSRQLGMWNAMICGYAQAGMDEEALE 372
Query: 120 VLKEMWV-LGLELSASTFVSVVSGCSFRQGI----SMHCCVYKLGLLNNEIPLANSVMSM 174
+ M G S +T V+ C+ +G +MH V K G+ N + N++M M
Sbjct: 373 LFSRMEAEAGCAPSETTMSGVLPACARSEGFAGKEAMHGYVVKRGMAGNRF-VQNALMDM 431
Query: 175 YAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMR----------- 223
YA+ G+++ AR IF I +VSW T+I G V G+ EAF L +M+
Sbjct: 432 YARLGEMDVARRIFAMIDPRDVVSWNTLITGCVVQGHAAEAFQLVTEMQLPSPSPSSSST 491
Query: 224 -----RMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTK 278
P+ + + L+ GCA + +H ++ ++ + + LV MY K
Sbjct: 492 TEEGEAHRCMPNNITLMTLLPGCAALAAPARGKEIHGYAVRHALESDIAVGSALVDMYAK 551
Query: 279 CGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLK-TSVRPNEATLAT 337
CG L +R VFD + ++V W +I Y G EAV LF + PNE T
Sbjct: 552 CGCLAASRAVFDRLPRRNVITWNVLIMAYGMHGLGDEAVALFDEMAAGGEATPNEVTFIA 611
Query: 338 TLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTS------LIHMFSKCGRINKAKEVFE 391
L+AC+ G + +G E+ +G+E + V+ + ++ + + GR+++A +
Sbjct: 612 ALAACSHSGLVDRGLEL-----FHGMERDHGVKPTPDLHACVVDVLGRAGRLDEAYSIIT 666
Query: 392 RVP--DKDLAVWSAMINGYAIHG---MGDQALNLFYKMQHVEGLKPDAVVYTSILSACSH 446
+ ++ ++ WS+++ +H +G+ A ++++ E A Y + + S
Sbjct: 667 SMEPGEQQVSAWSSLLGACRLHRNVELGEVAAERLFELEPGE-----ASHYVLLCNIYSA 721
Query: 447 SGMVDDGLSFFKSM-QSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQV- 504
+GM D ++ M + EP ++L G RF +A ++ H EV A +
Sbjct: 722 AGMWDKSVAVRVRMRRQGVAKEPGCS----WIELDGAIHRF-MAGESSHPASAEVHAHMD 776
Query: 505 ----------WAPLLSACMKHHNVELGEYAA 525
+AP S + H+V+ E AA
Sbjct: 777 ALWERMRREGYAPDTSCVL--HDVDEDEKAA 805
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 131/447 (29%), Positives = 217/447 (48%), Gaps = 24/447 (5%)
Query: 2 IRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGF 61
IR+ T G+ L SS+ + + F P +K+ A + + +H+ L+
Sbjct: 35 IRSLTAAGNHAAALRALSSLSASSAQLDHFALPPAIKSAAALRDARAARSLHAAALRRAL 94
Query: 62 --QQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAIL 119
+ V L+ Y++C D ++ + LR VS+NS+ISA + A+
Sbjct: 95 LHRPSPAVGNALLTAYARCGDLDAALALFAATATELRDAVSYNSLISALCLFRQWERALD 154
Query: 120 VLKEMWVLGL-ELSASTFVSVVSGCSF-------RQGISMHCCVYKLGLLN---NEIPLA 168
L++M G ++S+ T VSV+ CS R G H K G L+ P
Sbjct: 155 ALRDMLAEGRHDVSSFTLVSVLLACSHLPGDDGRRLGREAHAFALKRGFLDEGRERFPF- 213
Query: 169 NSVMSMYAKFGKVNEARSIFDEI------GETSIVSWTTIIGGYVNVGNVNEAFGLCNQM 222
N+++SMYA+ G V++A+S+F G +V+W T+I V G EA + M
Sbjct: 214 NALLSMYARLGLVDDAQSLFRTTAAAFSPGGGDVVTWNTMISLLVQGGRCAEAVEVLYDM 273
Query: 223 RRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDP-LDNLLVSMYTKCGD 281
+ V PD V F + + C+++ L L MH+++LK + + + LV MY
Sbjct: 274 VSLGVRPDGVTFASALPACSRLEMLALGREMHAVVLKDADLAANSFVASALVDMYAGNEK 333
Query: 282 LELARRVFDAVLEKS--VFLWTSMIGGYAQLGYPSEAVNLFKRL-LKTSVRPNEATLATT 338
+ ARRVFD V E S + +W +MI GYAQ G EA+ LF R+ + P+E T++
Sbjct: 334 VASARRVFDMVPEPSRQLGMWNAMICGYAQAGMDEEALELFSRMEAEAGCAPSETTMSGV 393
Query: 339 LSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDL 398
L ACA + + + Y+V G+ NR VQ +L+ M+++ G ++ A+ +F + +D+
Sbjct: 394 LPACARSEGFAGKEAMHGYVVKRGMAGNRFVQNALMDMYARLGEMDVARRIFAMIDPRDV 453
Query: 399 AVWSAMINGYAIHGMGDQALNLFYKMQ 425
W+ +I G + G +A L +MQ
Sbjct: 454 VSWNTLITGCVVQGHAAEAFQLVTEMQ 480
>gi|224079057|ref|XP_002305733.1| predicted protein [Populus trichocarpa]
gi|222848697|gb|EEE86244.1| predicted protein [Populus trichocarpa]
Length = 571
Score = 351 bits (901), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 180/484 (37%), Positives = 285/484 (58%), Gaps = 5/484 (1%)
Query: 137 VSVVSGCSFRQGISMHCCVYKLGL---LNNEIPLANSVMSMYAKFGKVNEARSIFDEIGE 193
VS++ C+ +S+ V+ G+ ++ + N+++ MYAK G ++ A +FD +
Sbjct: 2 VSILQACANCGDVSLGRAVHGSGVKACVHWKTTFCNTLLDMYAKCGVLDGAILVFDLMSV 61
Query: 194 TSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSM 253
++V+WT++I Y G +EA L ++M R V+PD+ ++ CA G+L +
Sbjct: 62 RTVVTWTSLIAAYAREGLSDEAIRLFHEMDREGVSPDIFTITTVLHACACNGSLENGKDV 121
Query: 254 HSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYP 313
H+ + ++ + + N L+ MY KCG +E A VF + K + W +MIGGY++ P
Sbjct: 122 HNYIRENDMQSNIFVCNALMDMYAKCGSMEDANSVFLEMPVKDIISWNTMIGGYSKNSLP 181
Query: 314 SEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSL 373
+EA++LF ++ ++P+ TLA L ACA L SL +GKE+ +I+ NG S++QV +L
Sbjct: 182 NEALSLFGDMV-LEMKPDGTTLACILPACASLASLDRGKEVHGHILRNGFFSDQQVANAL 240
Query: 374 IHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPD 433
+ M+ KCG A+ +F+ +P KDL W+ MI GY +HG G+ A+ F +M+ G++PD
Sbjct: 241 VDMYVKCGVPVLARLLFDMIPTKDLITWTVMIAGYGMHGFGNNAITTFNEMRQA-GIEPD 299
Query: 434 AVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTI 493
V + SIL ACSHSG++D+G FF MQ ++P +EHY C+VDLL R+G+ +A K I
Sbjct: 300 EVSFISILYACSHSGLLDEGWRFFNVMQDECNVKPKLEHYACIVDLLARSGKLAMAYKFI 359
Query: 494 HEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWK 553
MP+E A +W LLS C HH+V+L E A+++ L P +TG Y+L+AN + A W+
Sbjct: 360 KSMPIEPDATIWGALLSGCRIHHDVKLAEKVAEHVFELEPENTGYYVLLANTYAEAEKWE 419
Query: 554 EAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKELHIKLLEAG 613
E R + R L K PG S +E+ V +F+AG+ SH + I LK L K+ E G
Sbjct: 420 EVKKLRQKIGRRGLKKNPGCSWIEVKSKVHIFLAGNSSHPQAKKIEVLLKRLRSKMKEEG 479
Query: 614 YIAE 617
Y +
Sbjct: 480 YFPK 483
Score = 192 bits (489), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 127/419 (30%), Positives = 212/419 (50%), Gaps = 25/419 (5%)
Query: 36 VLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRL 95
+L+ACAN + G+ VH +K L+DMY+KC + V D M VR
Sbjct: 4 ILQACANCGDVSLGRAVHGSGVKACVHWKTTFCNTLLDMYAKCGVLDGAILVFDLMSVR- 62
Query: 96 RSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGC----SFRQGISM 151
+VV+W S+I+A++R L+DEAI + EM G+ T +V+ C S G +
Sbjct: 63 -TVVTWTSLIAAYAREGLSDEAIRLFHEMDREGVSPDIFTITTVLHACACNGSLENGKDV 121
Query: 152 HCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGN 211
H + + + +N I + N++M MYAK G + +A S+F E+ I+SW T+IGGY
Sbjct: 122 HNYIRENDMQSN-IFVCNALMDMYAKCGSMEDANSVFLEMPVKDIISWNTMIGGYSKNSL 180
Query: 212 VNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNL 271
NEA L M + + PD ++ CA + +L +H +L++G+ ++ + N
Sbjct: 181 PNEALSLFGDM-VLEMKPDGTTLACILPACASLASLDRGKEVHGHILRNGFFSDQQVANA 239
Query: 272 LVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPN 331
LV MY KCG LAR +FD + K + WT MI GY G+ + A+ F + + + P+
Sbjct: 240 LVDMYVKCGVPVLARLLFDMIPTKDLITWTVMIAGYGMHGFGNNAITTFNEMRQAGIEPD 299
Query: 332 EATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIH------MFSKCGRINK 385
E + + L AC+ G L +G + N ++ V+ L H + ++ G++
Sbjct: 300 EVSFISILYACSHSGLLDEG-----WRFFNVMQDECNVKPKLEHYACIVDLLARSGKLAM 354
Query: 386 AKEVFERVP-DKDLAVWSAMINGYAIHGMGDQALNLFYKM-QHVEGLKPDAVVYTSILS 442
A + + +P + D +W A+++G IH + L K+ +HV L+P+ Y +L+
Sbjct: 355 AYKFIKSMPIEPDATIWGALLSGCRIH----HDVKLAEKVAEHVFELEPENTGYYVLLA 409
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 87/313 (27%), Positives = 162/313 (51%), Gaps = 12/313 (3%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+I G +E + + M + GV + FT VL ACA S+ +GK VH+++ +
Sbjct: 70 LIAAYAREGLSDEAIRLFHEMDREGVSPDIFTITTVLHACACNGSLENGKDVHNYIREND 129
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
Q + FV L+DMY+KC + V EMPV + ++SWN++I +S+ L +EA+ +
Sbjct: 130 MQSNIFVCNALMDMYAKCGSMEDANSVFLEMPV--KDIISWNTMIGGYSKNSLPNEALSL 187
Query: 121 LKEMWVLGLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
+M VL ++ +T ++ C S +G +H + + G +++ +AN+++ MY
Sbjct: 188 FGDM-VLEMKPDGTTLACILPACASLASLDRGKEVHGHILRNGFFSDQ-QVANALVDMYV 245
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K G AR +FD I +++WT +I GY G N A N+MR+ + PD V F++
Sbjct: 246 KCGVPVLARLLFDMIPTKDLITWTVMIAGYGMHGFGNNAITTFNEMRQAGIEPDEVSFIS 305
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDN--LLVSMYTKCGDLELARRVFDAV-L 293
++ C+ G L + +++ N + L++ +V + + G L +A + ++ +
Sbjct: 306 ILYACSHSGLLDEGWRFFN-VMQDECNVKPKLEHYACIVDLLARSGKLAMAYKFIKSMPI 364
Query: 294 EKSVFLWTSMIGG 306
E +W +++ G
Sbjct: 365 EPDATIWGALLSG 377
>gi|317106770|dbj|BAJ53262.1| JMS10C05.5 [Jatropha curcas]
Length = 638
Score = 351 bits (901), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 202/611 (33%), Positives = 327/611 (53%), Gaps = 10/611 (1%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+I+ ++ FE L+ S M ++G N T ++L+AC++ + G++ H V+K G
Sbjct: 12 LIKGYLDDNEFESALNIASEMHKSGEALNEHTCSVILQACSSPDYRIFGQQFHCFVIKCG 71
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F ++ V T LI MY++ F + KV D M + V +N +I ++RA ++AI V
Sbjct: 72 FDENVVVGTSLIAMYTRSKLFGDAEKVFDSMACK--DVRCFNFMILEYARAGNGEKAIRV 129
Query: 121 LKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
M GL+ + TF +++S C +G +K G LN E + N++++MY
Sbjct: 130 FINMLNAGLQPNDYTFTNIISACDGDLGIEEGEQFLGLSFKYGFLN-ETSIGNAIINMYG 188
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K G EA +F + + +++SWT +I GY G+ +A ++ V D +
Sbjct: 189 KKGMAREAERMFSAMTDRNLISWTALISGYTRSGDGKKAVDTFMELHLCGVNFDSSLLTT 248
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
++ GC++ NL L L +H L++K GY + LV +Y KCG+L AR VFD + K
Sbjct: 249 ILDGCSECRNLELGLQIHGLVIKLGYACAVNIGTALVDLYAKCGNLMSARMVFDGLSSKR 308
Query: 297 VFLWTSMIGGYAQLGYPSE--AVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEI 354
+ + +++ G+ + E + LF ++P+ T + LS A +L +G+
Sbjct: 309 IASFNAILAGFMENSRDGEEDPIVLFNHFRLDGIKPDMVTFSRLLSLSANHSTLGRGRCY 368
Query: 355 EEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMG 414
Y + G E++ V ++I M++KCG I +A +F + D D W+AMI+ YA+HG G
Sbjct: 369 HAYAIKTGFEADLSVANAVITMYAKCGSIEEAHRMFNVMNDHDSISWNAMISAYALHGQG 428
Query: 415 DQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYL 474
+ L LF +M E PD + SIL AC++SG+ DG+S F M+ +GI+P +EHY
Sbjct: 429 AKVLLLFEEMIKKE-FAPDEITILSILQACTYSGLFRDGISLFNVMEPKYGIKPLLEHYA 487
Query: 475 CLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPG 534
C+VDLLGRAG A+ I++ P +W L++ C + G+ A+K LL L+P
Sbjct: 488 CMVDLLGRAGHLSEAMDIINKSPFSKSTLLWRTLVNVCKLCGDRNFGKLASKYLLELSPV 547
Query: 535 STGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHL 594
G+YIL++N++ M EAA R +M+D +L+KE G S +EID V FVA + H
Sbjct: 548 EAGSYILVSNMYAGERMLDEAAKVRTVMNDLKLSKEAGTSWIEIDDKVHHFVASGKDHPE 607
Query: 595 SVDIRKTLKEL 605
S +I L L
Sbjct: 608 SNEIYAELDLL 618
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 70/288 (24%), Positives = 140/288 (48%), Gaps = 2/288 (0%)
Query: 197 VSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSL 256
++WT++I GY++ A + ++M + + ++ C+ H
Sbjct: 7 ITWTSLIKGYLDDNEFESALNIASEMHKSGEALNEHTCSVILQACSSPDYRIFGQQFHCF 66
Query: 257 LLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEA 316
++K G++ + L++MYT+ A +VFD++ K V + MI YA+ G +A
Sbjct: 67 VIKCGFDENVVVGTSLIAMYTRSKLFGDAEKVFDSMACKDVRCFNFMILEYARAGNGEKA 126
Query: 317 VNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHM 376
+ +F +L ++PN+ T +SAC + +G++ G + + ++I+M
Sbjct: 127 IRVFINMLNAGLQPNDYTFTNIISACDGDLGIEEGEQFLGLSFKYGFLNETSIGNAIINM 186
Query: 377 FSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVV 436
+ K G +A+ +F + D++L W+A+I+GY G G +A++ F ++ H+ G+ D+ +
Sbjct: 187 YGKKGMAREAERMFSAMTDRNLISWTALISGYTRSGDGKKAVDTFMEL-HLCGVNFDSSL 245
Query: 437 YTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAG 484
T+IL CS ++ GL + G ++ LVDL + G
Sbjct: 246 LTTILDGCSECRNLELGLQ-IHGLVIKLGYACAVNIGTALVDLYAKCG 292
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 102/194 (52%), Gaps = 4/194 (2%)
Query: 292 VLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKG 351
+L ++ WTS+I GY A+N+ + K+ NE T + L AC+ G
Sbjct: 1 MLVRNTITWTSLIKGYLDDNEFESALNIASEMHKSGEALNEHTCSVILQACSSPDYRIFG 60
Query: 352 KEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIH 411
++ +++ G + N V TSLI M+++ A++VF+ + KD+ ++ MI YA
Sbjct: 61 QQFHCFVIKCGFDENVVVGTSLIAMYTRSKLFGDAEKVFDSMACKDVRCFNFMILEYARA 120
Query: 412 GMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFK-SMQSNFGIEPSI 470
G G++A+ +F M + GL+P+ +T+I+SAC +++G F S + F E SI
Sbjct: 121 GNGEKAIRVFINMLNA-GLQPNDYTFTNIISACDGDLGIEEGEQFLGLSFKYGFLNETSI 179
Query: 471 EHYLCLVDLLGRAG 484
+ ++++ G+ G
Sbjct: 180 GN--AIINMYGKKG 191
>gi|15233584|ref|NP_193218.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274931|sp|O23337.1|PP311_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g14820
gi|2244839|emb|CAB10261.1| hypothetical protein [Arabidopsis thaliana]
gi|7268228|emb|CAB78524.1| hypothetical protein [Arabidopsis thaliana]
gi|332658106|gb|AEE83506.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 722
Score = 351 bits (901), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 191/619 (30%), Positives = 332/619 (53%), Gaps = 45/619 (7%)
Query: 37 LKACANINSIWDGKRVHSHVLK--VGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVR 94
L C ++N I K++H+H+L+ + + ++F+ + S + + V +P
Sbjct: 19 LSFCKSLNHI---KQLHAHILRTVINHKLNSFLFNLSVSSSSINLSY--ALNVFSSIPSP 73
Query: 95 LRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCS----FRQGIS 150
S+V +N + SR+ IL + + +G L +F+ ++ S +G+
Sbjct: 74 PESIV-FNPFLRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAVSKVSALFEGME 132
Query: 151 MHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVG 210
+H +K+ L + + M MYA G++N AR++FDE+ +V+W T+I Y G
Sbjct: 133 LHGVAFKIATLCDPF-VETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFG 191
Query: 211 NVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDN 270
V+EAF L +M+ +V PD ++ N++ C + GN+ +++ L+++ + L
Sbjct: 192 LVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLT 251
Query: 271 LLVSMY-------------------------------TKCGDLELARRVFDAVLEKSVFL 299
LV+MY +KCG L+ A+ +FD +K +
Sbjct: 252 ALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVC 311
Query: 300 WTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIV 359
WT+MI Y + YP EA+ +F+ + + ++P+ ++ + +SACA LG L K K + I
Sbjct: 312 WTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIH 371
Query: 360 LNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALN 419
+NGLES + +LI+M++KCG ++ ++VFE++P +++ WS+MIN ++HG AL+
Sbjct: 372 VNGLESELSINNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMINALSMHGEASDALS 431
Query: 420 LFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDL 479
LF +M+ E ++P+ V + +L CSHSG+V++G F SM + I P +EHY C+VDL
Sbjct: 432 LFARMKQ-ENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKLEHYGCMVDL 490
Query: 480 LGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNY 539
GRA AL+ I MPV +W L+SAC H +ELG++AAK +L L P G
Sbjct: 491 FGRANLLREALEVIESMPVASNVVIWGSLMSACRIHGELELGKFAAKRILELEPDHDGAL 550
Query: 540 ILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIR 599
+LM+N++ W++ R +M+++ + KE G S+++ +G F+ GD+ H S +I
Sbjct: 551 VLMSNIYAREQRWEDVRNIRRVMEEKNVFKEKGLSRIDQNGKSHEFLIGDKRHKQSNEIY 610
Query: 600 KTLKELHIKLLEAGYIAEA 618
L E+ KL AGY+ +
Sbjct: 611 AKLDEVVSKLKLAGYVPDC 629
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 129/473 (27%), Positives = 234/473 (49%), Gaps = 51/473 (10%)
Query: 2 IRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGF 61
+R+ + + T+ Y + G + F+F +LKA + ++++++G +H K+
Sbjct: 83 LRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAVSKVSALFEGMELHGVAFKIAT 142
Query: 62 QQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVL 121
D FV+TG +DMY+ C +R V DEM R VV+WN++I + R L DEA +
Sbjct: 143 LCDPFVETGFMDMYASCGRINYARNVFDEMS--HRDVVTWNTMIERYCRFGLVDEAFKLF 200
Query: 122 KEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGLLNNEIPL-------------- 167
+EM + ++VS C + + +Y+ L+ N++ +
Sbjct: 201 EEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEF-LIENDVRMDTHLLTALVTMYAG 259
Query: 168 ---------------------ANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGY 206
+ +++S Y+K G++++A+ IFD+ + +V WTT+I Y
Sbjct: 260 AGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAY 319
Query: 207 VNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNED 266
V EA + +M + PD+V ++I CA +G L A +HS + +G +E
Sbjct: 320 VESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHVNGLESEL 379
Query: 267 PLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKT 326
++N L++MY KCG L+ R VF+ + ++V W+SMI + G S+A++LF R+ +
Sbjct: 380 SINNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMINALSMHGEASDALSLFARMKQE 439
Query: 327 SVRPNEATLATTLSACAELGSLSKGKEI-----EEYIVLNGLESNRQVQTSLIHMFSKCG 381
+V PNE T L C+ G + +GK+I +EY + LE ++ +F +
Sbjct: 440 NVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKLEH----YGCMVDLFGRAN 495
Query: 382 RINKAKEVFERVP-DKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPD 433
+ +A EV E +P ++ +W ++++ IH G+ L F + +E L+PD
Sbjct: 496 LLREALEVIESMPVASNVVIWGSLMSACRIH--GELELGKFAAKRILE-LEPD 545
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/278 (21%), Positives = 127/278 (45%), Gaps = 34/278 (12%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI G +E + M + V + ++ AC ++ + ++ +++
Sbjct: 183 MIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIEND 242
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVR-------------------------- 94
+ D + T L+ MY+ +R+ +M VR
Sbjct: 243 VRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFD 302
Query: 95 ---LRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCS----FRQ 147
+ +V W ++ISA+ + EA+ V +EM G++ + SV+S C+ +
Sbjct: 303 QTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDK 362
Query: 148 GISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYV 207
+H C++ G L +E+ + N++++MYAK G ++ R +F+++ ++VSW+++I
Sbjct: 363 AKWVHSCIHVNG-LESELSINNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMINALS 421
Query: 208 NVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVG 245
G ++A L +M++ +V P+ V F+ ++ GC+ G
Sbjct: 422 MHGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSG 459
Score = 40.4 bits (93), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 54/108 (50%), Gaps = 2/108 (1%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI + +G + LS ++ M Q V N TF VL C++ + +GK++ + +
Sbjct: 416 MINALSMHGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEY 475
Query: 61 FQQDAFVQTG-LIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISA 107
G ++D++ + + + +V++ MPV +VV W S++SA
Sbjct: 476 NITPKLEHYGCMVDLFGRANLLREALEVIESMPV-ASNVVIWGSLMSA 522
>gi|356542389|ref|XP_003539649.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Glycine max]
Length = 676
Score = 351 bits (901), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 203/596 (34%), Positives = 324/596 (54%), Gaps = 19/596 (3%)
Query: 37 LKACA--NINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRK----VLDE 90
LK C + S+ K+ H +L++G QD + LI++ + S ++ + V +
Sbjct: 5 LKKCFAWGLKSLHQAKQCHCLLLRLGLHQDTY----LINLLLRSSLHFAATQYATVVFAQ 60
Query: 91 MPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCS-----F 145
P ++ +N++I +A+ V M G TF V+ C+ F
Sbjct: 61 TP--HPNIFLYNTLIRGMVSNDAFRDAVSVYASMRQHGFAPDNFTFPFVLKACTRLPHYF 118
Query: 146 RQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGG 205
G+S+H V K G + ++ + ++ +Y+K G + +AR +FDEI E ++VSWT II G
Sbjct: 119 HVGLSLHSLVIKTGF-DWDVFVKTGLVCLYSKNGFLTDARKVFDEIPEKNVVSWTAIICG 177
Query: 206 YVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNE 265
Y+ G EA GL + M + PD + ++ C++VG+L + + +SG
Sbjct: 178 YIESGCFGEALGLFRGLLEMGLRPDSFTLVRILYACSRVGDLASGRWIDGYMRESGSVGN 237
Query: 266 DPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLK 325
+ LV MY KCG +E ARRVFD ++EK V W+++I GYA G P EA+++F + +
Sbjct: 238 VFVATSLVDMYAKCGSMEEARRVFDGMVEKDVVCWSALIQGYASNGMPKEALDVFFEMQR 297
Query: 326 TSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINK 385
+VRP+ + SAC+ LG+L G + + SN + T+LI ++KCG + +
Sbjct: 298 ENVRPDCYAMVGVFSACSRLGALELGNWARGLMDGDEFLSNPVLGTALIDFYAKCGSVAQ 357
Query: 386 AKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACS 445
AKEVF+ + KD V++A+I+G A+ G A +F +M V G++PD + +L C+
Sbjct: 358 AKEVFKGMRRKDCVVFNAVISGLAMCGHVGAAFGVFGQMVKV-GMQPDGNTFVGLLCGCT 416
Query: 446 HSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVW 505
H+G+VDDG +F M S F + P+IEHY C+VDL RAG A I MP+E + VW
Sbjct: 417 HAGLVDDGHRYFSGMSSVFSVTPTIEHYGCMVDLQARAGLLVEAQDLIRSMPMEANSIVW 476
Query: 506 APLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDR 565
LL C H + +L E+ K L+ L P ++G+Y+L++N+++++ W EA R ++ +
Sbjct: 477 GALLGGCRLHKDTQLAEHVLKQLIELEPWNSGHYVLLSNIYSASHRWDEAEKIRSSLNQK 536
Query: 566 RLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKELHIKLLEAGYIAEADIV 621
+ K PG S VE+DG V F+ GD SH LS I + L+ L L EAGY + V
Sbjct: 537 GMQKLPGCSWVEVDGVVHEFLVGDTSHPLSHKIYEKLESLFKDLREAGYNPTTEFV 592
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 130/458 (28%), Positives = 229/458 (50%), Gaps = 20/458 (4%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWD-GKRVHSHVLKV 59
+IR +N +F + +S Y+SM Q G ++FTFP VLKAC + + G +HS V+K
Sbjct: 72 LIRGMVSNDAFRDAVSVYASMRQHGFAPDNFTFPFVLKACTRLPHYFHVGLSLHSLVIKT 131
Query: 60 GFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAIL 119
GF D FV+TGL+ +YSK +RKV DE+P ++VVSW +II + + EA+
Sbjct: 132 GFDWDVFVKTGLVCLYSKNGFLTDARKVFDEIPE--KNVVSWTAIICGYIESGCFGEALG 189
Query: 120 VLKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMY 175
+ + + +GL + T V ++ CS G + + + G + N + +A S++ MY
Sbjct: 190 LFRGLLEMGLRPDSFTLVRILYACSRVGDLASGRWIDGYMRESGSVGN-VFVATSLVDMY 248
Query: 176 AKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFL 235
AK G + EAR +FD + E +V W+ +I GY + G EA + +M+R +V PD +
Sbjct: 249 AKCGSMEEARRVFDGMVEKDVVCWSALIQGYASNGMPKEALDVFFEMQRENVRPDCYAMV 308
Query: 236 NLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEK 295
+ C+++G L L L+ + + L L+ Y KCG + A+ VF + K
Sbjct: 309 GVFSACSRLGALELGNWARGLMDGDEFLSNPVLGTALIDFYAKCGSVAQAKEVFKGMRRK 368
Query: 296 SVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIE 355
++ ++I G A G+ A +F +++K ++P+ T L C G + G
Sbjct: 369 DCVVFNAVISGLAMCGHVGAAFGVFGQMVKVGMQPDGNTFVGLLCGCTHAGLVDDGHRY- 427
Query: 356 EYIVLNGLESNRQVQTSLIH------MFSKCGRINKAKEVFERVP-DKDLAVWSAMINGY 408
+G+ S V ++ H + ++ G + +A+++ +P + + VW A++ G
Sbjct: 428 ----FSGMSSVFSVTPTIEHYGCMVDLQARAGLLVEAQDLIRSMPMEANSIVWGALLGGC 483
Query: 409 AIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSH 446
+H A ++ ++ +E V S + + SH
Sbjct: 484 RLHKDTQLAEHVLKQLIELEPWNSGHYVLLSNIYSASH 521
>gi|356557599|ref|XP_003547103.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31070,
mitochondrial-like [Glycine max]
Length = 601
Score = 351 bits (901), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 191/581 (32%), Positives = 324/581 (55%), Gaps = 8/581 (1%)
Query: 2 IRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGF 61
I++ + G + +TL +S + G SF P V+KA ++ G ++H LK G
Sbjct: 23 IKSFLSKGLYHQTLQLFSELHLCGHSSISFFLPSVIKASSSAQCHTFGTQLHCLALKTGS 82
Query: 62 QQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVL 121
+ V +I MY K SD S+R+V D MP R ++WNS+I+ + +EA+ L
Sbjct: 83 HSETVVSNSIITMYFKFSDVGSARQVFDTMP--HRDPITWNSLINGYLHNGYLEEALEAL 140
Query: 122 KEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGLLNNEIP----LANSVMSMYAK 177
++++LGL SVVS C R G + ++ L ++N I L+ +++ Y +
Sbjct: 141 NDVYLLGLVPKPELLASVVSMCGRRMGSKIGRQIHALVVVNERIGQSMFLSTALVDFYFR 200
Query: 178 FGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNL 237
G A +FD + ++VSWTT+I G + + +EAF M+ V P+ V + L
Sbjct: 201 CGDSLMALRVFDGMEVKNVVSWTTMISGCIAHQDYDEAFACFRAMQAEGVCPNRVTSIAL 260
Query: 238 ILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGD-LELARRVFDAVLEKS 296
+ CA+ G + +H + G+ + + LV+MY +CG+ + LA +F+ +
Sbjct: 261 LSACAEPGFVKHGKEIHGYAFRHGFESCPSFSSALVNMYCQCGEPMHLAELIFEGSSFRD 320
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEE 356
V LW+S+IG +++ G +A+ LF ++ + PN TL +SAC L SL G +
Sbjct: 321 VVLWSSIIGSFSRRGDSFKALKLFNKMRTEEIEPNYVTLLAVISACTNLSSLKHGCGLHG 380
Query: 357 YIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQ 416
YI G + V +LI+M++KCG +N ++++F +P++D WS++I+ Y +HG G+Q
Sbjct: 381 YIFKFGFCFSISVGNALINMYAKCGCLNGSRKMFLEMPNRDNVTWSSLISAYGLHGCGEQ 440
Query: 417 ALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCL 476
AL +FY+M G+KPDA+ + ++LSAC+H+G+V +G FK ++++ I +IEHY CL
Sbjct: 441 ALQIFYEMNE-RGVKPDAITFLAVLSACNHAGLVAEGQRIFKQVRADCEIPLTIEHYACL 499
Query: 477 VDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGST 536
VDLLGR+G+ + AL+ MP++ A++W+ L+SAC H +++ E A L+ P +
Sbjct: 500 VDLLGRSGKLEYALEIRRTMPMKPSARIWSSLVSACKLHGRLDIAEMLAPQLIRSEPNNA 559
Query: 537 GNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVE 577
GNY L+ ++ G W + R M ++L K G+S++E
Sbjct: 560 GNYTLLNTIYAEHGHWLDTEQVREAMKLQKLKKCYGFSRIE 600
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 96/374 (25%), Positives = 176/374 (47%), Gaps = 17/374 (4%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI + ++E + + +M GV N T +L ACA + GK +H + + G
Sbjct: 225 MISGCIAHQDYDEAFACFRAMQAEGVCPNRVTSIALLSACAEPGFVKHGKEIHGYAFRHG 284
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F+ + L++MY +C + + +++ E R VV W+SII + SR + +A+ +
Sbjct: 285 FESCPSFSSALVNMYCQCGEPMHLAELIFE-GSSFRDVVLWSSIIGSFSRRGDSFKALKL 343
Query: 121 LKEMWVLGLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
+M +E + T ++V+S C S + G +H ++K G + I + N++++MYA
Sbjct: 344 FNKMRTEEIEPNYVTLLAVISACTNLSSLKHGCGLHGYIFKFGFCFS-ISVGNALINMYA 402
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K G +N +R +F E+ V+W+++I Y G +A + +M V PD + FL
Sbjct: 403 KCGCLNGSRKMFLEMPNRDNVTWSSLISAYGLHGCGEQALQIFYEMNERGVKPDAITFLA 462
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLD----NLLVSMYTKCGDLELARRVFDAV 292
++ C G L + + + E PL LV + + G LE A + +
Sbjct: 463 VLSACNHAG---LVAEGQRIFKQVRADCEIPLTIEHYACLVDLLGRSGKLEYALEIRRTM 519
Query: 293 -LEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSAC-AELGSLSK 350
++ S +W+S++ G A L +L+++ PN A T L+ AE G
Sbjct: 520 PMKPSARIWSSLVSACKLHGRLDIAEMLAPQLIRS--EPNNAGNYTLLNTIYAEHGHWLD 577
Query: 351 GKEIEEYIVLNGLE 364
+++ E + L L+
Sbjct: 578 TEQVREAMKLQKLK 591
>gi|225463424|ref|XP_002272240.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g14730-like [Vitis vinifera]
Length = 629
Score = 351 bits (901), Expect = 7e-94, Method: Compositional matrix adjust.
Identities = 191/588 (32%), Positives = 319/588 (54%), Gaps = 10/588 (1%)
Query: 37 LKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLR 96
L+A A+ ++ GK +HS++L GF T LI+MYSKC+ + + + P
Sbjct: 44 LQASAHHKNLSKGKEIHSYMLINGFLNSPLSITSLINMYSKCNQMNFALSIFSD-PTHEI 102
Query: 97 SVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGC-SFRQGISMHCCV 155
+V ++N+IIS +E ++M G+ TF + C + +H +
Sbjct: 103 NVFAFNAIISGFITNGFPEEGFEFYQKMRNEGVIPDKFTFPCAIKACLDVLEIKKIHGLL 162
Query: 156 YKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEA 215
+K GL ++ + +++++ Y KFG + A+ F+E+ +V W ++ GY +G
Sbjct: 163 FKFGL-ELDVFIGSALVNCYLKFGLMEHAQVAFEELPIRDVVLWNAMVNGYAQIGQFEMV 221
Query: 216 FGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSM 275
+M SV P ++ A +G+L +H +K GY++ + N L+ M
Sbjct: 222 LETFRRMNDESVVPSRFTVTGVLSVFAVMGDLNNGRIIHGFAMKMGYDSGVAVSNSLIDM 281
Query: 276 YTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATL 335
Y KC +E A +F+ + EK +F W S++ + Q G + L R+L ++P+ T+
Sbjct: 282 YGKCKCIEDALEIFEMMREKDIFSWNSIVSVHEQCGDHDGTLRLLDRMLGAGIQPDLVTV 341
Query: 336 ATTLSACAELGSLSKGKEIEEYIVLNGLESNRQ------VQTSLIHMFSKCGRINKAKEV 389
T L AC+ L +L G+EI Y++++GL + + ++ ++I M++KCG + A V
Sbjct: 342 TTVLPACSHLAALMHGREIHGYMIVSGLGKDGKDIDDVLLKNAVIDMYAKCGSMRDAHLV 401
Query: 390 FERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGM 449
FER+ +KD+A W+ MI GY +HG G++AL +F +M V+ LKPD V + +LSACSH+G
Sbjct: 402 FERMSNKDVASWNIMIMGYGMHGYGNEALEMFSRMCEVQ-LKPDEVTFVGVLSACSHAGF 460
Query: 450 VDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLL 509
V G +F M+S + + P+IEHY C++D+LGRAG+ D A + MP+E VW LL
Sbjct: 461 VSQGRNFLVQMKSKYDVAPTIEHYTCVIDMLGRAGQLDEAYELALTMPIEANPVVWRALL 520
Query: 510 SACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTK 569
+AC H + L E AA+ + L P G+Y+LM+N++ + G ++E R M + + K
Sbjct: 521 AACRLHKHAVLAEVAAQRVFELEPEHCGSYVLMSNVYGAVGRYEEVLEVRHTMRQQNVRK 580
Query: 570 EPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKELHIKLLEAGYIAE 617
PG S +E+ V VFV+ DR+H + I L L +L E GY+ +
Sbjct: 581 TPGCSWIELKNGVHVFVSADRAHPEAHSIYAGLNSLTARLREHGYVPD 628
Score = 175 bits (443), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 114/427 (26%), Positives = 206/427 (48%), Gaps = 26/427 (6%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+I NG EE Y M GV + FTFP +KAC ++ I K++H + K G
Sbjct: 110 IISGFITNGFPEEGFEFYQKMRNEGVIPDKFTFPCAIKACLDVLEI---KKIHGLLFKFG 166
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+ D F+ + L++ Y K ++ +E+P+ R VV WN++++ +++ + +
Sbjct: 167 LELDVFIGSALVNCYLKFGLMEHAQVAFEELPI--RDVVLWNAMVNGYAQIGQFEMVLET 224
Query: 121 LKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
+ M + S T V+S + G +H K+G ++ + ++NS++ MY
Sbjct: 225 FRRMNDESVVPSRFTVTGVLSVFAVMGDLNNGRIIHGFAMKMG-YDSGVAVSNSLIDMYG 283
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K + +A IF+ + E I SW +I+ + G+ + L ++M + PDLV
Sbjct: 284 KCKCIEDALEIFEMMREKDIFSWNSIVSVHEQCGDHDGTLRLLDRMLGAGIQPDLVTVTT 343
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDP------LDNLLVSMYTKCGDLELARRVFD 290
++ C+ + L +H ++ SG + L N ++ MY KCG + A VF+
Sbjct: 344 VLPACSHLAALMHGREIHGYMIVSGLGKDGKDIDDVLLKNAVIDMYAKCGSMRDAHLVFE 403
Query: 291 AVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSK 350
+ K V W MI GY GY +EA+ +F R+ + ++P+E T LSAC+ G +S+
Sbjct: 404 RMSNKDVASWNIMIMGYGMHGYGNEALEMFSRMCEVQLKPDEVTFVGVLSACSHAGFVSQ 463
Query: 351 GKEI-----EEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVP-DKDLAVWSAM 404
G+ +Y V +E T +I M + G++++A E+ +P + + VW A+
Sbjct: 464 GRNFLVQMKSKYDVAPTIEH----YTCVIDMLGRAGQLDEAYELALTMPIEANPVVWRAL 519
Query: 405 INGYAIH 411
+ +H
Sbjct: 520 LAACRLH 526
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 88/173 (50%), Gaps = 12/173 (6%)
Query: 331 NEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVF 390
N T +L A A +LSKGKEI Y+++NG ++ TSLI+M+SKC ++N A +F
Sbjct: 36 NLTTCIASLQASAHHKNLSKGKEIHSYMLINGFLNSPLSITSLINMYSKCNQMNFALSIF 95
Query: 391 ERVPDKDLAVWS--AMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSG 448
P ++ V++ A+I+G+ +G ++ + KM++ EG+ PD + + AC
Sbjct: 96 SD-PTHEINVFAFNAIISGFITNGFPEEGFEFYQKMRN-EGVIPDKFTFPCAIKACLDVL 153
Query: 449 MVDD--GLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVE 499
+ GL F FG+E + LV+ + G + A E+P+
Sbjct: 154 EIKKIHGLLF------KFGLELDVFIGSALVNCYLKFGLMEHAQVAFEELPIR 200
>gi|297736478|emb|CBI25349.3| unnamed protein product [Vitis vinifera]
Length = 1241
Score = 351 bits (900), Expect = 7e-94, Method: Compositional matrix adjust.
Identities = 207/612 (33%), Positives = 330/612 (53%), Gaps = 14/612 (2%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI NG +E++L YS S +F AC++ + G++VH V+K+
Sbjct: 620 MIGGFVENGMWEKSLELYSLAKNENCKLVSASFTGAFTACSHGEVLDFGRQVHCDVIKMN 679
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEM---PVRLRSVVSWNSIISAHSRACLNDEA 117
FQ D +V T L+ MY+K ++KV D++ V LR N++ISA +A
Sbjct: 680 FQDDPYVCTSLLTMYAKSGSVEDAKKVFDQVLDKEVELR-----NAMISAFIGNGRAYDA 734
Query: 118 ILVLKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMS 173
+ + +M + + T S++SGCS + G ++H V K + +N + + +++++
Sbjct: 735 LGLYNKMKAGETPVDSFTISSLLSGCSVVGSYDFGRTVHAEVIKRSMQSN-VAIQSALLT 793
Query: 174 MYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVV 233
MY K G +A S+F + E +V+W ++I G+ +A L M + V D V
Sbjct: 794 MYYKCGSTEDADSVFYTMKERDVVAWGSMIAGFCQNRRFKDALDLFRAMEKEGVKADSDV 853
Query: 234 FLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVL 293
++I + N+ L +H +K G ++ + LV MY+K G E A VF ++
Sbjct: 854 MTSVISAGLGLENVELGHLIHGFAIKRGLESDVFVACSLVDMYSKFGFAESAEMVFSSMP 913
Query: 294 EKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKE 353
K++ W SMI Y+ G P ++NL ++L+ + ++ T L A + + +L KGK
Sbjct: 914 NKNLVAWNSMISCYSWNGLPEMSINLLPQILQHGFYLDSVSITTVLVAVSSVAALLKGKT 973
Query: 354 IEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGM 413
+ Y + + S+ QV+ +LI M+ KCG + A+ +FE +P ++L W++MI GY HG
Sbjct: 974 LHAYQIRLQIPSDLQVENALIDMYVKCGCLKYAQLIFENMPRRNLVTWNSMIAGYGSHGN 1033
Query: 414 GDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHY 473
++A+ LF +M+ E PD V + +++++CSHSGMV++GL+ F+ M+ +G+EP +EHY
Sbjct: 1034 CEEAVRLFKEMKRSE-TAPDEVTFLALITSCSHSGMVEEGLNLFQLMRIEYGVEPRMEHY 1092
Query: 474 LCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNP 533
+VDLLGRAGR D A I MP++ VW LL AC H N+ELGE A NLL + P
Sbjct: 1093 ASVVDLLGRAGRLDDAYSFIRGMPIDADRSVWLCLLFACRAHRNMELGELVADNLLKMEP 1152
Query: 534 GSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHH 593
NY+ + NL+ MW AA R M R L K PG S +E+ V VF +GD S
Sbjct: 1153 ARGSNYVPLLNLYGEVEMWDRAANLRASMKGRGLKKSPGCSWIEVKNRVDVFFSGDSSST 1212
Query: 594 LSVDIRKTLKEL 605
++I KTL L
Sbjct: 1213 RRIEIYKTLSSL 1224
Score = 196 bits (497), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 129/504 (25%), Positives = 245/504 (48%), Gaps = 11/504 (2%)
Query: 2 IRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGF 61
I+ G + + L +S + + FTFP +LK CA++++++ G+ +H+ ++ +G
Sbjct: 413 IKALVQQGKYSQALELHSKTPHSALTTAKFTFPSLLKTCASLSNLYHGRTIHASIVTMGL 472
Query: 62 QQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRS---VVSWNSIISAHSRACLNDEAI 118
Q D ++ T LI+MY KC S+ +V D+M S + WN +I + + +E +
Sbjct: 473 QSDPYIATSLINMYVKCGLLGSALQVFDKMSESRDSAPDITVWNPVIDGYFKYGHFEEGL 532
Query: 119 LVLKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSM 174
M LG+ + V+ C+ + G +H + + + + L +++ M
Sbjct: 533 AQFCRMQELGIRPDGYSLSIVLGICNRLSWYMAGRQIHGYIIR-NMFEGDPYLETALIGM 591
Query: 175 YAKFGKVNEARSIFDEI-GETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVV 233
Y+ + EA S+F ++ ++IV+W +IGG+V G ++ L + + +
Sbjct: 592 YSSCSRPMEAWSLFGKLENRSNIVAWNVMIGGFVENGMWEKSLELYSLAKNENCKLVSAS 651
Query: 234 FLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVL 293
F C+ L +H ++K + ++ + L++MY K G +E A++VFD VL
Sbjct: 652 FTGAFTACSHGEVLDFGRQVHCDVIKMNFQDDPYVCTSLLTMYAKSGSVEDAKKVFDQVL 711
Query: 294 EKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKE 353
+K V L +MI + G +A+ L+ ++ + T+++ LS C+ +GS G+
Sbjct: 712 DKEVELRNAMISAFIGNGRAYDALGLYNKMKAGETPVDSFTISSLLSGCSVVGSYDFGRT 771
Query: 354 IEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGM 413
+ ++ ++SN +Q++L+ M+ KCG A VF + ++D+ W +MI G+ +
Sbjct: 772 VHAEVIKRSMQSNVAIQSALLTMYYKCGSTEDADSVFYTMKERDVVAWGSMIAGFCQNRR 831
Query: 414 GDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHY 473
AL+LF M+ EG+K D+ V TS++SA V+ G G+E +
Sbjct: 832 FKDALDLFRAMEK-EGVKADSDVMTSVISAGLGLENVELG-HLIHGFAIKRGLESDVFVA 889
Query: 474 LCLVDLLGRAGRFDLALKTIHEMP 497
LVD+ + G + A MP
Sbjct: 890 CSLVDMYSKFGFAESAEMVFSSMP 913
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 85/161 (52%), Gaps = 6/161 (3%)
Query: 291 AVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSK 350
AVLE I Q G S+A+ L + +++ + T + L CA L +L
Sbjct: 400 AVLELMNLPQVEEIKALVQQGKYSQALELHSKTPHSALTTAKFTFPSLLKTCASLSNLYH 459
Query: 351 GKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPD-----KDLAVWSAMI 405
G+ I IV GL+S+ + TSLI+M+ KCG + A +VF+++ + D+ VW+ +I
Sbjct: 460 GRTIHASIVTMGLQSDPYIATSLINMYVKCGLLGSALQVFDKMSESRDSAPDITVWNPVI 519
Query: 406 NGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSH 446
+GY +G ++ L F +MQ + G++PD + +L C+
Sbjct: 520 DGYFKYGHFEEGLAQFCRMQEL-GIRPDGYSLSIVLGICNR 559
>gi|225457769|ref|XP_002278218.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
mitochondrial [Vitis vinifera]
gi|302142763|emb|CBI19966.3| unnamed protein product [Vitis vinifera]
Length = 1048
Score = 351 bits (900), Expect = 8e-94, Method: Compositional matrix adjust.
Identities = 205/626 (32%), Positives = 337/626 (53%), Gaps = 12/626 (1%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
M+ NG + + +S M G + FT+ +L ACA + + G+++HS ++K
Sbjct: 421 MLGGYAQNGYASKVMKLFSEMRGCGFWPDEFTYTSILSACACLECLEMGRQLHSFIIKHN 480
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F+ + FV+ L+DMY+KC +R+ + +R R VSWN+II + + DEA +
Sbjct: 481 FEYNLFVENTLVDMYAKCGALEEARQQFE--FIRNRDNVSWNAIIVGYVQEEDEDEAFNM 538
Query: 121 LKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
+ M + G+ + S++SGC+ QG +HC + K GL + +S++ MY
Sbjct: 539 FRRMILDGIAPDEVSLASILSGCANLQALEQGEQVHCFLVKSGL-QTCLYAGSSLIDMYV 597
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K G + AR +F + S+VS II GY ++ EA L +M+ + P + F +
Sbjct: 598 KCGAIEAARYVFSCMPSRSVVSMNAIIAGYAQ-NDLVEAIDLFQEMQNEGLNPSEITFAS 656
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGY-NNEDPLDNLLVSMYTKCGDLELARRVFDAV-LE 294
L+ C L L +H L+ K G + D L L+ MY A +F
Sbjct: 657 LLDACTGPYKLNLGRQIHCLIQKRGLLYDGDFLGVSLLVMYMNSQRKTDADILFSEFQYP 716
Query: 295 KSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEI 354
KS LWT++I G+ Q G EA+ L++ + + + RP++AT A+ L AC+ L SL G+ I
Sbjct: 717 KSTILWTAIISGHTQNGCSEEALQLYQEMHRNNARPDQATFASVLRACSILASLGDGRMI 776
Query: 355 EEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDK-DLAVWSAMINGYAIHGM 413
I GL+S+ ++++ M++KCG + + +VFE + K D+ W++MI G+A +G
Sbjct: 777 HSLIFHVGLDSDELTGSAVVDMYAKCGDMKSSVQVFEEMGSKNDVISWNSMIVGFAKNGY 836
Query: 414 GDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHY 473
+ AL +F +M+H ++PD V + +L+ACSH+G V +G F M ++ I P ++H
Sbjct: 837 AENALKIFDEMKHTR-IRPDDVTFLGVLTACSHAGRVSEGREIFDIMVHSYKIVPRLDHC 895
Query: 474 LCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNP 533
C++DLLGR G A + I ++ E A +WA LL AC H + G AA+ L+ L P
Sbjct: 896 ACMIDLLGRWGFLKEAEEFIDKLNFEPNAMIWATLLGACRIHGDDIRGRRAAEKLIELEP 955
Query: 534 GSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHH 593
++ Y+L++N++ ++G W E + R M ++ L K PG S + + +FVAGD+ H
Sbjct: 956 ENSSPYVLLSNIYAASGNWDEVNSVRRAMREKGLRKLPGCSWIVVGQKTNLFVAGDKFHP 1015
Query: 594 LSVDIRKTLKELHIKLLEAGYIAEAD 619
+ +I LK+L + E GYIAE D
Sbjct: 1016 SAGEIHALLKDLIALMKEDGYIAETD 1041
Score = 254 bits (650), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 151/492 (30%), Positives = 260/492 (52%), Gaps = 36/492 (7%)
Query: 6 TNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDA 65
+ GS E+ + + S+ GV N FT+ +VL +CA + I GK+VH V+K+GF+ ++
Sbjct: 158 SRQGSLEQVIWCFGSLQNCGVSPNQFTYAIVLSSCARLVDIDLGKQVHCGVIKMGFEFNS 217
Query: 66 FVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMW 125
F + LIDMYSKC V +RK+ D V VSW ++I+ + + L +EA+ V ++M
Sbjct: 218 FCEGSLIDMYSKCGSLVDARKIFD--AVVDPDTVSWTAMIAGYVQVGLPEEALKVFEDMQ 275
Query: 126 VLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEAR 185
LGL FV+V++ C +GL G++++A
Sbjct: 276 KLGLVPDQVAFVTVITAC--------------VGL------------------GRLDDAC 303
Query: 186 SIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVG 245
+F ++ T++V+W +I G+V G EA M + V +++ A +
Sbjct: 304 DLFVQMPNTNVVAWNVMISGHVKRGCDIEAIDFFKNMWKTGVKSTRSTLGSVLSAIASLE 363
Query: 246 NLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIG 305
L L +H+ +K G N+ + + L++MY KC +E A++VFDA+ E+++ LW +M+G
Sbjct: 364 ALNYGLLVHAQAIKQGLNSNVYVGSSLINMYAKCEKMEAAKKVFDALDERNLVLWNAMLG 423
Query: 306 GYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLES 365
GYAQ GY S+ + LF + P+E T + LSACA L L G+++ +I+ + E
Sbjct: 424 GYAQNGYASKVMKLFSEMRGCGFWPDEFTYTSILSACACLECLEMGRQLHSFIIKHNFEY 483
Query: 366 NRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQ 425
N V+ +L+ M++KCG + +A++ FE + ++D W+A+I GY D+A N+F +M
Sbjct: 484 NLFVENTLVDMYAKCGALEEARQQFEFIRNRDNVSWNAIIVGYVQEEDEDEAFNMFRRMI 543
Query: 426 HVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGR 485
++G+ PD V SILS C++ ++ G + + G++ + L+D+ + G
Sbjct: 544 -LDGIAPDEVSLASILSGCANLQALEQGEQVHCFLVKS-GLQTCLYAGSSLIDMYVKCGA 601
Query: 486 FDLALKTIHEMP 497
+ A MP
Sbjct: 602 IEAARYVFSCMP 613
Score = 220 bits (561), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 138/449 (30%), Positives = 231/449 (51%), Gaps = 44/449 (9%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI G EE L + M + G+ + F V+ AC + + D
Sbjct: 254 MIAGYVQVGLPEEALKVFEDMQKLGLVPDQVAFVTVITACVGLGRLDDAC---------- 303
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
D FVQ MP +VV+WN +IS H + + EAI
Sbjct: 304 ---DLFVQ----------------------MPNT--NVVAWNVMISGHVKRGCDIEAIDF 336
Query: 121 LKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
K MW G++ + ST SV+S + G+ +H K GL N+ + + +S+++MYA
Sbjct: 337 FKNMWKTGVKSTRSTLGSVLSAIASLEALNYGLLVHAQAIKQGL-NSNVYVGSSLINMYA 395
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K K+ A+ +FD + E ++V W ++GGY G ++ L ++MR PD + +
Sbjct: 396 KCEKMEAAKKVFDALDERNLVLWNAMLGGYAQNGYASKVMKLFSEMRGCGFWPDEFTYTS 455
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
++ CA + L + +HS ++K + ++N LV MY KCG LE AR+ F+ + +
Sbjct: 456 ILSACACLECLEMGRQLHSFIIKHNFEYNLFVENTLVDMYAKCGALEEARQQFEFIRNRD 515
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEE 356
W ++I GY Q EA N+F+R++ + P+E +LA+ LS CA L +L +G+++
Sbjct: 516 NVSWNAIIVGYVQEEDEDEAFNMFRRMILDGIAPDEVSLASILSGCANLQALEQGEQVHC 575
Query: 357 YIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQ 416
++V +GL++ +SLI M+ KCG I A+ VF +P + + +A+I GYA + + +
Sbjct: 576 FLVKSGLQTCLYAGSSLIDMYVKCGAIEAARYVFSCMPSRSVVSMNAIIAGYAQNDLV-E 634
Query: 417 ALNLFYKMQHVEGLKPDAVVYTSILSACS 445
A++LF +MQ+ EGL P + + S+L AC+
Sbjct: 635 AIDLFQEMQN-EGLNPSEITFASLLDACT 662
Score = 210 bits (535), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 149/525 (28%), Positives = 253/525 (48%), Gaps = 12/525 (2%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI G E + + +M +TGV T VL A A++ ++ G VH+ +K G
Sbjct: 320 MISGHVKRGCDIEAIDFFKNMWKTGVKSTRSTLGSVLSAIASLEALNYGLLVHAQAIKQG 379
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+ +V + LI+MY+KC +++KV D + R++V WN+++ +++ + + +
Sbjct: 380 LNSNVYVGSSLINMYAKCEKMEAAKKVFDALDE--RNLVLWNAMLGGYAQNGYASKVMKL 437
Query: 121 LKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
EM G T+ S++S C+ G +H + K N + + N+++ MYA
Sbjct: 438 FSEMRGCGFWPDEFTYTSILSACACLECLEMGRQLHSFIIKHNFEYN-LFVENTLVDMYA 496
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K G + EAR F+ I VSW II GYV + +EAF + +M + PD V +
Sbjct: 497 KCGALEEARQQFEFIRNRDNVSWNAIIVGYVQEEDEDEAFNMFRRMILDGIAPDEVSLAS 556
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
++ GCA + L +H L+KSG + L+ MY KCG +E AR VF + +S
Sbjct: 557 ILSGCANLQALEQGEQVHCFLVKSGLQTCLYAGSSLIDMYVKCGAIEAARYVFSCMPSRS 616
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEE 356
V ++I GYAQ EA++LF+ + + P+E T A+ L AC L+ G++I
Sbjct: 617 VVSMNAIIAGYAQNDLV-EAIDLFQEMQNEGLNPSEITFASLLDACTGPYKLNLGRQIHC 675
Query: 357 YIVLNGLESNRQ-VQTSLIHMFSKCGRINKAKEVFERVP-DKDLAVWSAMINGYAIHGMG 414
I GL + + SL+ M+ R A +F K +W+A+I+G+ +G
Sbjct: 676 LIQKRGLLYDGDFLGVSLLVMYMNSQRKTDADILFSEFQYPKSTILWTAIISGHTQNGCS 735
Query: 415 DQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYL 474
++AL L+ +M H +PD + S+L ACS + DG S+ + G++
Sbjct: 736 EEALQLYQEM-HRNNARPDQATFASVLRACSILASLGDG-RMIHSLIFHVGLDSDELTGS 793
Query: 475 CLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVE 519
+VD+ + G +++ EM + W ++ K+ E
Sbjct: 794 AVVDMYAKCGDMKSSVQVFEEMGSKNDVISWNSMIVGFAKNGYAE 838
Score = 210 bits (534), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 134/445 (30%), Positives = 223/445 (50%), Gaps = 46/445 (10%)
Query: 50 KRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHS 109
K +H+ LK GF + + ++D+Y+KC + + K +++ R +++WNS++S +S
Sbjct: 101 KTIHAQTLKFGFGSKGRLGSAIVDLYAKCGNVEFAAKAFNQL--EKRDILAWNSVLSMYS 158
Query: 110 RACLNDEAILVLKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEI 165
R ++ I + G+ + T+ V+S C+ G +HC V K+G N
Sbjct: 159 RQGSLEQVIWCFGSLQNCGVSPNQFTYAIVLSSCARLVDIDLGKQVHCGVIKMGFEFNSF 218
Query: 166 PLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRM 225
S++ MY+K G + +AR IFD + + VSWT +I GYV VG EA + M+++
Sbjct: 219 -CEGSLIDMYSKCGSLVDARKIFDAVVDPDTVSWTAMIAGYVQVGLPEEALKVFEDMQKL 277
Query: 226 SVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELA 285
+ PD V F+ +I C +G L D +L V M
Sbjct: 278 GLVPDQVAFVTVITACVGLGRL------------------DDACDLFVQMPNT------- 312
Query: 286 RRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAEL 345
+V W MI G+ + G EA++ FK + KT V+ +TL + LSA A L
Sbjct: 313 ----------NVVAWNVMISGHVKRGCDIEAIDFFKNMWKTGVKSTRSTLGSVLSAIASL 362
Query: 346 GSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMI 405
+L+ G + + GL SN V +SLI+M++KC ++ AK+VF+ + +++L +W+AM+
Sbjct: 363 EALNYGLLVHAQAIKQGLNSNVYVGSSLINMYAKCEKMEAAKKVFDALDERNLVLWNAML 422
Query: 406 NGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKS-MQSNF 464
GYA +G + + LF +M+ G PD YTSILSAC+ ++ G ++ NF
Sbjct: 423 GGYAQNGYASKVMKLFSEMRGC-GFWPDEFTYTSILSACACLECLEMGRQLHSFIIKHNF 481
Query: 465 GIEPSIEHYLCLVDLLGRAGRFDLA 489
+E+ LVD+ + G + A
Sbjct: 482 EYNLFVEN--TLVDMYAKCGALEEA 504
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 76/309 (24%), Positives = 150/309 (48%), Gaps = 37/309 (11%)
Query: 146 RQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGG 205
R ++H K G ++ L ++++ +YAK G V A F+++ + I++W +++
Sbjct: 98 RTSKTIHAQTLKFGF-GSKGRLGSAIVDLYAKCGNVEFAAKAFNQLEKRDILAWNSVLSM 156
Query: 206 YVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNE 265
Y G++ + ++ V+P+ + ++ CA++ ++ L +H ++K G+
Sbjct: 157 YSRQGSLEQVIWCFGSLQNCGVSPNQFTYAIVLSSCARLVDIDLGKQVHCGVIKMGFEFN 216
Query: 266 DPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLK 325
+ L+ MY+KCG L AR++FDAV++ WT+MI GY Q+G P EA+ +F+ + K
Sbjct: 217 SFCEGSLIDMYSKCGSLVDARKIFDAVVDPDTVSWTAMIAGYVQVGLPEEALKVFEDMQK 276
Query: 326 TSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINK 385
+ P++ T ++AC L GR++
Sbjct: 277 LGLVPDQVAFVTVITACVGL-----------------------------------GRLDD 301
Query: 386 AKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACS 445
A ++F ++P+ ++ W+ MI+G+ G +A++ F M G+K S+LSA +
Sbjct: 302 ACDLFVQMPNTNVVAWNVMISGHVKRGCDIEAIDFFKNMWKT-GVKSTRSTLGSVLSAIA 360
Query: 446 HSGMVDDGL 454
++ GL
Sbjct: 361 SLEALNYGL 369
>gi|356557931|ref|XP_003547263.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g04370-like [Glycine max]
Length = 764
Score = 351 bits (900), Expect = 8e-94, Method: Compositional matrix adjust.
Identities = 205/622 (32%), Positives = 333/622 (53%), Gaps = 20/622 (3%)
Query: 6 TNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDA 65
+ G E S + M + G+ +S T +L + + + + +H + GF D
Sbjct: 146 SRTGRVPEAFSLFDEMRRQGIQPSSVTMLSLLFGVSELAHV---QCLHGSAILYGFMSDI 202
Query: 66 FVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMW 125
+ ++ MY KC + SRK+ D M R +VSWNS++SA+++ E +L+LK M
Sbjct: 203 NLSNSMLSMYGKCRNIEYSRKLFDYMDQR--DLVSWNSLVSAYAQIGYICEVLLLLKTMR 260
Query: 126 VLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGL---LNNEIPLANSVMSMYAKFGKVN 182
+ G E TF SV+S + R + + C++ L + + + S++ MY K G ++
Sbjct: 261 IQGFEPDPQTFGSVLSVAASRGELKLGRCLHGQILRTCFDLDAHVETSLIVMYLKGGNID 320
Query: 183 EARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCA 242
A +F+ + +V WT +I G V G+ ++A + QM + V ++I CA
Sbjct: 321 IAFRMFERSLDKDVVLWTAMISGLVQNGSADKALAVFRQMLKFGVKSSTATMASVITACA 380
Query: 243 QVGNLFLALSMHSLLLKSGYNNEDPLD----NLLVSMYTKCGDLELARRVFDAVLEKSVF 298
Q+G+ L S+H + + +E P+D N LV+M+ KCG L+ + VFD + ++++
Sbjct: 381 QLGSYNLGTSVHGYMFR----HELPMDIATQNSLVTMHAKCGHLDQSSIVFDKMNKRNLV 436
Query: 299 LWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYI 358
W +MI GYAQ GY +A+ LF + P+ T+ + L CA G L GK I ++
Sbjct: 437 SWNAMITGYAQNGYVCKALFLFNEMRSDHQTPDSITIVSLLQGCASTGQLHLGKWIHSFV 496
Query: 359 VLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQAL 418
+ NGL V TSL+ M+ KCG ++ A+ F ++P DL WSA+I GY HG G+ AL
Sbjct: 497 IRNGLRPCILVDTSLVDMYCKCGDLDIAQRCFNQMPSHDLVSWSAIIVGYGYHGKGETAL 556
Query: 419 NLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVD 478
+ K G+KP+ V++ S+LS+CSH+G+V+ GL+ ++SM +FGI P++EH+ C+VD
Sbjct: 557 RFYSKFLE-SGMKPNHVIFLSVLSSCSHNGLVEQGLNIYESMTRDFGIAPNLEHHACVVD 615
Query: 479 LLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGN 538
LL RAGR + A + + V +L AC + N ELG+ A ++L L P GN
Sbjct: 616 LLSRAGRVEEAYNLYKKKFSDPVLDVLGIILDACRANGNNELGDTIANDILMLKPMDAGN 675
Query: 539 YILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDI 598
++ +A+ + S W+E A M L K PGWS ++I G++ F SH +I
Sbjct: 676 FVQLAHCYASINKWEEVGEAWTHMRSLGLKKIPGWSFIDIHGTITTFFTDHNSHPQFQEI 735
Query: 599 RKTLKELHIKLLEAGYIAEADI 620
TLK L ++++ + E DI
Sbjct: 736 VCTLKFLRKEMIK---MEELDI 754
Score = 283 bits (723), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 162/498 (32%), Positives = 284/498 (57%), Gaps = 6/498 (1%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+I + ++ G+ + L+TY+SML+T V +++TFP +LKAC+++N G +H +L G
Sbjct: 40 IINHHSSQGAHRQVLATYASMLKTHVPSDAYTFPSLLKACSSLNLFSLGLSLHQRILVSG 99
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
DA++ + LI+ Y+K +RKV D MP R +VV W SII +SR EA +
Sbjct: 100 LSLDAYIASSLINFYAKFGFADVARKVFDFMPER--NVVPWTSIIGCYSRTGRVPEAFSL 157
Query: 121 LKEMWVLGLELSASTFVSVVSGCSFRQGIS-MHCCVYKLGLLNNEIPLANSVMSMYAKFG 179
EM G++ S+ T +S++ G S + +H G ++ +I L+NS++SMY K
Sbjct: 158 FDEMRRQGIQPSSVTMLSLLFGVSELAHVQCLHGSAILYGFMS-DINLSNSMLSMYGKCR 216
Query: 180 KVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLIL 239
+ +R +FD + + +VSW +++ Y +G + E L MR PD F +++
Sbjct: 217 NIEYSRKLFDYMDQRDLVSWNSLVSAYAQIGYICEVLLLLKTMRIQGFEPDPQTFGSVLS 276
Query: 240 GCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFL 299
A G L L +H +L++ ++ + ++ L+ MY K G++++A R+F+ L+K V L
Sbjct: 277 VAASRGELKLGRCLHGQILRTCFDLDAHVETSLIVMYLKGGNIDIAFRMFERSLDKDVVL 336
Query: 300 WTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIV 359
WT+MI G Q G +A+ +F+++LK V+ + AT+A+ ++ACA+LGS + G + Y+
Sbjct: 337 WTAMISGLVQNGSADKALAVFRQMLKFGVKSSTATMASVITACAQLGSYNLGTSVHGYMF 396
Query: 360 LNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALN 419
+ L + Q SL+ M +KCG ++++ VF+++ ++L W+AMI GYA +G +AL
Sbjct: 397 RHELPMDIATQNSLVTMHAKCGHLDQSSIVFDKMNKRNLVSWNAMITGYAQNGYVCKALF 456
Query: 420 LFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDL 479
LF +M+ + PD++ S+L C+ +G + G + S G+ P I LVD+
Sbjct: 457 LFNEMRS-DHQTPDSITIVSLLQGCASTGQLHLG-KWIHSFVIRNGLRPCILVDTSLVDM 514
Query: 480 LGRAGRFDLALKTIHEMP 497
+ G D+A + ++MP
Sbjct: 515 YCKCGDLDIAQRCFNQMP 532
Score = 204 bits (518), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 119/363 (32%), Positives = 202/363 (55%), Gaps = 9/363 (2%)
Query: 97 SVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCS----FRQGISMH 152
++ S+N+II+ HS + + + M + A TF S++ CS F G+S+H
Sbjct: 33 TINSFNAIINHHSSQGAHRQVLATYASMLKTHVPSDAYTFPSLLKACSSLNLFSLGLSLH 92
Query: 153 CCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNV 212
+ G L+ + +A+S+++ YAKFG + AR +FD + E ++V WT+IIG Y G V
Sbjct: 93 QRILVSG-LSLDAYIASSLINFYAKFGFADVARKVFDFMPERNVVPWTSIIGCYSRTGRV 151
Query: 213 NEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLL 272
EAF L ++MRR + P V L+L+ G +++ ++ +H + G+ ++ L N +
Sbjct: 152 PEAFSLFDEMRRQGIQPSSVTMLSLLFGVSELAHV---QCLHGSAILYGFMSDINLSNSM 208
Query: 273 VSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNE 332
+SMY KC ++E +R++FD + ++ + W S++ YAQ+GY E + L K + P+
Sbjct: 209 LSMYGKCRNIEYSRKLFDYMDQRDLVSWNSLVSAYAQIGYICEVLLLLKTMRIQGFEPDP 268
Query: 333 ATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFER 392
T + LS A G L G+ + I+ + + V+TSLI M+ K G I+ A +FER
Sbjct: 269 QTFGSVLSVAASRGELKLGRCLHGQILRTCFDLDAHVETSLIVMYLKGGNIDIAFRMFER 328
Query: 393 VPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDD 452
DKD+ +W+AMI+G +G D+AL +F +M G+K S+++AC+ G +
Sbjct: 329 SLDKDVVLWTAMISGLVQNGSADKALAVFRQMLKF-GVKSSTATMASVITACAQLGSYNL 387
Query: 453 GLS 455
G S
Sbjct: 388 GTS 390
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 90/375 (24%), Positives = 185/375 (49%), Gaps = 13/375 (3%)
Query: 192 GETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLAL 251
+I S+ II + + G + M + V D F +L+ C+ + L L
Sbjct: 30 ASATINSFNAIINHHSSQGAHRQVLATYASMLKTHVPSDAYTFPSLLKACSSLNLFSLGL 89
Query: 252 SMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLG 311
S+H +L SG + + + + L++ Y K G ++AR+VFD + E++V WTS+IG Y++ G
Sbjct: 90 SLHQRILVSGLSLDAYIASSLINFYAKFGFADVARKVFDFMPERNVVPWTSIIGCYSRTG 149
Query: 312 YPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQT 371
EA +LF + + ++P+ T+ + L +EL + + + +L G S+ +
Sbjct: 150 RVPEAFSLFDEMRRQGIQPSSVTMLSLLFGVSELAHV---QCLHGSAILYGFMSDINLSN 206
Query: 372 SLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLK 431
S++ M+ KC I ++++F+ + +DL W+++++ YA G + L L K ++G +
Sbjct: 207 SMLSMYGKCRNIEYSRKLFDYMDQRDLVSWNSLVSAYAQIGYICEVL-LLLKTMRIQGFE 265
Query: 432 PDAVVYTSILSACSHSGMVDDGLSFF-KSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLAL 490
PD + S+LS + G + G + +++ F ++ +E L ++ L G G D+A
Sbjct: 266 PDPQTFGSVLSVAASRGELKLGRCLHGQILRTCFDLDAHVETSLIVMYLKG--GNIDIAF 323
Query: 491 KTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSA- 549
+ + E ++ +W ++S +++ + + + +L G + MA++ T+
Sbjct: 324 R-MFERSLDKDVVLWTAMISGLVQNGSADKALAVFRQMLKF--GVKSSTATMASVITACA 380
Query: 550 --GMWKEAATARGLM 562
G + + G M
Sbjct: 381 QLGSYNLGTSVHGYM 395
>gi|297610920|ref|NP_001065364.2| Os10g0558600 [Oryza sativa Japonica Group]
gi|255679629|dbj|BAF27201.2| Os10g0558600 [Oryza sativa Japonica Group]
Length = 863
Score = 351 bits (900), Expect = 9e-94, Method: Compositional matrix adjust.
Identities = 185/617 (29%), Positives = 335/617 (54%), Gaps = 8/617 (1%)
Query: 2 IRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGF 61
I N + L + M + G+ + ++ ++CA ++ + G+++H+H +K F
Sbjct: 222 IAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCAAMSCLNTGRQLHAHAIKNKF 281
Query: 62 QQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVL 121
D V T ++D+Y+K + +R+ +P +V + N+++ RA L EA+ +
Sbjct: 282 SSDRVVGTAIVDVYAKANSLTDARRAFFGLPNH--TVETSNAMMVGLVRAGLGIEAMGLF 339
Query: 122 KEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAK 177
+ M + + V S C+ + QG +HC K G + +I + N+V+ +Y K
Sbjct: 340 QFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIKSGF-DVDICVNNAVLDLYGK 398
Query: 178 FGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNL 237
+ EA IF + + VSW II G+ ++ N+M R + PD + ++
Sbjct: 399 CKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILHFNEMLRFGMKPDDFTYGSV 458
Query: 238 ILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSV 297
+ CA + +L L +H ++KSG ++ + + +V MY KCG ++ A+++ D + + V
Sbjct: 459 LKACAALRSLEYGLMVHDKVIKSGLGSDAFVASTVVDMYCKCGIIDEAQKLHDRIGGQQV 518
Query: 298 FLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEY 357
W +++ G++ EA F +L ++P+ T AT L CA L ++ GK+I
Sbjct: 519 VSWNAILSGFSLNKESEEAQKFFSEMLDMGLKPDHFTFATVLDTCANLATIELGKQIHGQ 578
Query: 358 IVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQA 417
I+ + + + ++L+ M++KCG + + VFE+V +D W+AMI GYA+HG+G +A
Sbjct: 579 IIKQEMLDDEYISSTLVDMYAKCGDMPDSLLVFEKVEKRDFVSWNAMICGYALHGLGVEA 638
Query: 418 LNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLV 477
L +F +MQ E + P+ + ++L ACSH G+ DDG +F M +++ +EP +EH+ C+V
Sbjct: 639 LRMFERMQK-ENVVPNHATFVAVLRACSHVGLFDDGCRYFHLMTTHYKLEPQLEHFACMV 697
Query: 478 DLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTG 537
D+LGR+ A+K I+ MP + A +W LLS C +VE+ E AA N+L L+P +
Sbjct: 698 DILGRSKGPQEAVKFINSMPFQADAVIWKTLLSICKIRQDVEIAELAASNVLLLDPDDSS 757
Query: 538 NYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVD 597
YIL++N++ +G W + + R L+ RL KEPG S +E+ + F+ GD++H S +
Sbjct: 758 VYILLSNVYAESGKWADVSRTRRLLKQGRLKKEPGCSWIEVQSEMHGFLVGDKAHPRSGE 817
Query: 598 IRKTLKELHIKLLEAGY 614
+ + L +L ++ +GY
Sbjct: 818 LYEMLNDLIGEMKLSGY 834
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 118/461 (25%), Positives = 235/461 (50%), Gaps = 16/461 (3%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
++ G F+E++ + M + GV + TF ++LK+C+ + + G +VH+ +K G
Sbjct: 120 LVSGYCQRGMFQESVDLFVEMARRGVSPDRTTFAVLLKSCSALEELSLGVQVHALAVKTG 179
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAIL- 119
+ D + L+DMY KC + MP R+ VSW + I+ C+ +E +
Sbjct: 180 LEIDVRTGSALVDMYGKCRSLDDALCFFYGMPE--RNWVSWGAAIA----GCVQNEQYVR 233
Query: 120 ---VLKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVM 172
+ EM LGL +S ++ S C+ G +H K ++ + + +++
Sbjct: 234 GLELFIEMQRLGLGVSQPSYASAFRSCAAMSCLNTGRQLHAHAIKNKFSSDRV-VGTAIV 292
Query: 173 SMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLV 232
+YAK + +AR F + ++ + ++ G V G EA GL M R S+ D+V
Sbjct: 293 DVYAKANSLTDARRAFFGLPNHTVETSNAMMVGLVRAGLGIEAMGLFQFMIRSSIRFDVV 352
Query: 233 VFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAV 292
+ CA+ F +H L +KSG++ + ++N ++ +Y KC L A +F +
Sbjct: 353 SLSGVFSACAETKGYFQGQQVHCLAIKSGFDVDICVNNAVLDLYGKCKALMEAYLIFQGM 412
Query: 293 LEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGK 352
+K W ++I Q G+ + + F +L+ ++P++ T + L ACA L SL G
Sbjct: 413 KQKDSVSWNAIIAALEQNGHYDDTILHFNEMLRFGMKPDDFTYGSVLKACAALRSLEYGL 472
Query: 353 EIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHG 412
+ + ++ +GL S+ V ++++ M+ KCG I++A+++ +R+ + + W+A+++G++++
Sbjct: 473 MVHDKVIKSGLGSDAFVASTVVDMYCKCGIIDEAQKLHDRIGGQQVVSWNAILSGFSLNK 532
Query: 413 MGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDG 453
++A F +M + GLKPD + ++L C++ ++ G
Sbjct: 533 ESEEAQKFFSEMLDM-GLKPDHFTFATVLDTCANLATIELG 572
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 111/454 (24%), Positives = 216/454 (47%), Gaps = 12/454 (2%)
Query: 62 QQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVL 121
++D ++ YS D ++ + D MP VVSWN+++S + + + E++ +
Sbjct: 80 RRDTVSWNTMLTAYSHAGDISTAVALFDGMPDP--DVVSWNALVSGYCQRGMFQESVDLF 137
Query: 122 KEMWVLGLELSASTFVSVVSGCSFRQ----GISMHCCVYKLGLLNNEIPLANSVMSMYAK 177
EM G+ +TF ++ CS + G+ +H K GL ++ ++++ MY K
Sbjct: 138 VEMARRGVSPDRTTFAVLLKSCSALEELSLGVQVHALAVKTGL-EIDVRTGSALVDMYGK 196
Query: 178 FGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNL 237
+++A F + E + VSW I G V L +M+R+ + + +
Sbjct: 197 CRSLDDALCFFYGMPERNWVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASA 256
Query: 238 ILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSV 297
CA + L +H+ +K+ ++++ + +V +Y K L ARR F + +V
Sbjct: 257 FRSCAAMSCLNTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTV 316
Query: 298 FLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEY 357
+M+ G + G EA+ LF+ ++++S+R + +L+ SACAE +G+++
Sbjct: 317 ETSNAMMVGLVRAGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCL 376
Query: 358 IVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQA 417
+ +G + + V +++ ++ KC + +A +F+ + KD W+A+I +G D
Sbjct: 377 AIKSGFDVDICVNNAVLDLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDT 436
Query: 418 LNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFF-KSMQSNFGIEPSIEHYLCL 476
+ F +M G+KPD Y S+L AC+ ++ GL K ++S G + + +
Sbjct: 437 ILHFNEMLRF-GMKPDDFTYGSVLKACAALRSLEYGLMVHDKVIKSGLGSDAFVAS--TV 493
Query: 477 VDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLS 510
VD+ + G D A K +H+ Q W +LS
Sbjct: 494 VDMYCKCGIIDEAQK-LHDRIGGQQVVSWNAILS 526
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/312 (24%), Positives = 144/312 (46%), Gaps = 32/312 (10%)
Query: 167 LANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAF---------- 216
++N ++ MYA+ AR +FD + VSW T++ Y + G+++ A
Sbjct: 54 VSNCLLQMYARCAGAACARRVFDAMPRRDTVSWNTMLTAYSHAGDISTAVALFDGMPDPD 113
Query: 217 ---------GLCN------------QMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHS 255
G C +M R V+PD F L+ C+ + L L + +H+
Sbjct: 114 VVSWNALVSGYCQRGMFQESVDLFVEMARRGVSPDRTTFAVLLKSCSALEELSLGVQVHA 173
Query: 256 LLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSE 315
L +K+G + + LV MY KC L+ A F + E++ W + I G Q
Sbjct: 174 LAVKTGLEIDVRTGSALVDMYGKCRSLDDALCFFYGMPERNWVSWGAAIAGCVQNEQYVR 233
Query: 316 AVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIH 375
+ LF + + + ++ + A+ +CA + L+ G+++ + + N S+R V T+++
Sbjct: 234 GLELFIEMQRLGLGVSQPSYASAFRSCAAMSCLNTGRQLHAHAIKNKFSSDRVVGTAIVD 293
Query: 376 MFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAV 435
+++K + A+ F +P+ + +AM+ G G+G +A+ LF M ++ D V
Sbjct: 294 VYAKANSLTDARRAFFGLPNHTVETSNAMMVGLVRAGLGIEAMGLFQFMIR-SSIRFDVV 352
Query: 436 VYTSILSACSHS 447
+ + SAC+ +
Sbjct: 353 SLSGVFSACAET 364
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 115/267 (43%), Gaps = 34/267 (12%)
Query: 220 NQMRRMSVTPDLVVFLNLILGCAQVGN--LFLALSMHSLLLKSGYNNEDPLDNLLVSMYT 277
Q + V P V F + CAQ G L + H+ ++ SG+ + N L+ MY
Sbjct: 4 EQQQPPPVAPARVTFSRVFQSCAQAGREALAAGRAAHARMVVSGFVPTAFVSNCLLQMYA 63
Query: 278 KCGDLELARRVFDAVLEK-------------------------------SVFLWTSMIGG 306
+C ARRVFDA+ + V W +++ G
Sbjct: 64 RCAGAACARRVFDAMPRRDTVSWNTMLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSG 123
Query: 307 YAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESN 366
Y Q G E+V+LF + + V P+ T A L +C+ L LS G ++ V GLE +
Sbjct: 124 YCQRGMFQESVDLFVEMARRGVSPDRTTFAVLLKSCSALEELSLGVQVHALAVKTGLEID 183
Query: 367 RQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQH 426
+ ++L+ M+ KC ++ A F +P+++ W A I G + + L LF +MQ
Sbjct: 184 VRTGSALVDMYGKCRSLDDALCFFYGMPERNWVSWGAAIAGCVQNEQYVRGLELFIEMQR 243
Query: 427 VEGLKPDAVVYTSILSACSHSGMVDDG 453
+ GL Y S +C+ ++ G
Sbjct: 244 L-GLGVSQPSYASAFRSCAAMSCLNTG 269
>gi|297798898|ref|XP_002867333.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297313169|gb|EFH43592.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 792
Score = 350 bits (899), Expect = 9e-94, Method: Compositional matrix adjust.
Identities = 194/626 (30%), Positives = 337/626 (53%), Gaps = 13/626 (2%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQ-TGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKV 59
++R + N S +L+ ++ + + T + NS T+ + A + G +H +
Sbjct: 89 LMRGFSVNESPHSSLAVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGCVIHGQAIVD 148
Query: 60 GFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAIL 119
G + + + ++ MY K +RKV D MP + + WN++IS + + + E+I
Sbjct: 149 GCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEK--DTILWNTMISGYRKNEMYVESIQ 206
Query: 120 VLKEMWVLG-LELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSM 174
V +++ L +T + ++ + R G+ +H K G +++ L +S+
Sbjct: 207 VFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTG-FISL 265
Query: 175 YAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVF 234
Y+K GK+ A ++F E IV++ +I GY + G + L ++
Sbjct: 266 YSKCGKIKMASTLFREFRRPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGAKLKSSTL 325
Query: 235 LNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLE 294
++L+ G+L L ++H LKS + + + L ++Y+K ++E AR++FD E
Sbjct: 326 VSLV---PVSGHLMLIYAIHGYSLKSNFLSHTSVSTALTTVYSKLNEIESARKLFDESPE 382
Query: 295 KSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEI 354
KS+ W +MI GY Q G +A++LF+ + + PN T+ LSACA+LG+LS GK +
Sbjct: 383 KSLPSWNAMISGYTQNGLTEDAISLFREMQNSEFSPNPVTITCILSACAQLGALSLGKWV 442
Query: 355 EEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMG 414
+ + ES+ V T+LI M++KCG I +A+ +F+ +P K+ W+ MI+GY +HG G
Sbjct: 443 HDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDFMPKKNEVTWNTMISGYGLHGHG 502
Query: 415 DQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYL 474
+AL +F +M + G+ P V + +L ACSH+G+V +G F SM +G EPS++HY
Sbjct: 503 QEALTIFSEMLN-SGIAPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYA 561
Query: 475 CLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPG 534
C+VD+LGRAG AL+ I MP++ VW LL AC H + L ++ L L+P
Sbjct: 562 CVVDILGRAGHLQRALQFIEAMPIQPGPSVWETLLGACRIHKDTNLARTVSEKLFELDPD 621
Query: 535 STGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHL 594
+ G ++L++N+ ++ + +AAT R R+L K PG++ +EI + VF +GD+SH
Sbjct: 622 NVGYHVLLSNIHSADRNYPQAATVRQTAKKRKLAKAPGYTLIEIGETPHVFTSGDQSHPQ 681
Query: 595 SVDIRKTLKELHIKLLEAGYIAEADI 620
I + L++L K+ EAGY E ++
Sbjct: 682 VKAIHEKLEKLEGKMREAGYQPETEL 707
Score = 46.6 bits (109), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 54/106 (50%), Gaps = 2/106 (1%)
Query: 347 SLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMIN 406
S+S + IVL+G ++ + T L S G I A+++F V D+ +++ ++
Sbjct: 32 SISHLAQTHAQIVLHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNVLMR 91
Query: 407 GYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDD 452
G++++ +L +F ++ LKP++ Y +SA SG DD
Sbjct: 92 GFSVNESPHSSLAVFAHLRKSTDLKPNSSTYAFAISAA--SGFRDD 135
>gi|78499697|gb|ABB45851.1| hypothetical protein [Eutrema halophilum]
Length = 697
Score = 350 bits (899), Expect = 9e-94, Method: Compositional matrix adjust.
Identities = 199/595 (33%), Positives = 319/595 (53%), Gaps = 13/595 (2%)
Query: 12 EETLSTYSSML--QTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQT 69
EE L +S+M GV G+++ + LKAC ++I G+ +H++ K FV +
Sbjct: 76 EEALILFSAMRVDPLGVSGDTYVLSVALKACGQSSNIAYGESLHAYAEKTFLLSSVFVGS 135
Query: 70 GLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGL 129
L+DMY + S +V EMP R+ V+W + I+ A L+ E + +M
Sbjct: 136 ALLDMYMRIGKIDKSCRVFAEMP--FRNSVTWTAFITGLVHAGLHYEGLRYFSQMSRFK- 192
Query: 130 ELSASTFVSVVS--GCS-FRQ---GISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNE 183
+LS+ TF ++ C+ RQ G +H V G + +ANS+ +MY + G++ +
Sbjct: 193 QLSSDTFAFAIALKACADLRQVKYGREIHTHVIVKGFAAI-LWVANSLATMYTECGEMQD 251
Query: 184 ARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQ 243
+F+ + E +V WT++I Y+ +G +A MR V+P+ F + CA
Sbjct: 252 GLRLFESMSERDVVLWTSLITAYIRIGQEEKAVNTFLLMRNSQVSPNEQTFASTFAACAS 311
Query: 244 VGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSM 303
+ L +H + G + + N ++ MY+ C L+ A +F + + + W+++
Sbjct: 312 LSRLVWGEQLHGNVFSLGLGDSLSVSNSMMKMYSTCAKLDSASVLFQGMRCRDIISWSTI 371
Query: 304 IGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGL 363
IGGY+Q + E F + + +P + LA+ LS + L +G+++ + GL
Sbjct: 372 IGGYSQAAFGEECFKYFSWMRQAGPQPTDFALASLLSVSGIMAVLEQGRQVHALALYLGL 431
Query: 364 ESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYK 423
E N ++++LI+M+SKCG I +A +VFE D+ +AMINGYA HG ++A++LF K
Sbjct: 432 EQNPTIRSALINMYSKCGSIIEASKVFEEKDRTDIVSLTAMINGYAEHGKCEEAIDLFEK 491
Query: 424 MQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRA 483
+ +PD V + S+L+ACSHSG +D G +F MQ N+ + P+ EHY C+VDLL RA
Sbjct: 492 SLKL-SFRPDDVTFISVLTACSHSGQLDLGFQYFNLMQENYNMRPAKEHYGCMVDLLCRA 550
Query: 484 GRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMA 543
GR + A K I+EMP + VW LL AC + +VE G AA+ +L L+P S + +A
Sbjct: 551 GRLNDAEKMINEMPWKKDDVVWTTLLRACKEKGDVERGRRAAQRILELDPTSFTTLVTLA 610
Query: 544 NLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDI 598
N+ +S G WKEAA R M + + KEPGWS + I V F +G SH S D+
Sbjct: 611 NIHSSTGNWKEAANVRKDMKSKGVIKEPGWSSILIKDQVSAFASGSLSHPQSEDV 665
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 121/442 (27%), Positives = 223/442 (50%), Gaps = 28/442 (6%)
Query: 72 IDMYSKCSDFVSS------RKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMW 125
+D +S+ D + S R+V D+MP R + SW +I+ + A +EA+++ M
Sbjct: 29 VDTHSQLQDLIDSGKLRVARQVFDKMP--RRDIKSWTAIMKGYVAATKPEEALILFSAMR 86
Query: 126 VLGLELSASTFVSVVS--GC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFG 179
V L +S T+V V+ C + G S+H K LL++ + + ++++ MY + G
Sbjct: 87 VDPLGVSGDTYVLSVALKACGQSSNIAYGESLHAYAEKTFLLSS-VFVGSALLDMYMRIG 145
Query: 180 KVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRM-SVTPDLVVFLNLI 238
K++++ +F E+ + V+WT I G V+ G E +QM R ++ D F +
Sbjct: 146 KIDKSCRVFAEMPFRNSVTWTAFITGLVHAGLHYEGLRYFSQMSRFKQLSSDTFAFAIAL 205
Query: 239 LGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVF 298
CA + + +H+ ++ G+ + N L +MYT+CG+++ R+F+++ E+ V
Sbjct: 206 KACADLRQVKYGREIHTHVIVKGFAAILWVANSLATMYTECGEMQDGLRLFESMSERDVV 265
Query: 299 LWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYI 358
LWTS+I Y ++G +AVN F + + V PNE T A+T +ACA L L G+++ +
Sbjct: 266 LWTSLITAYIRIGQEEKAVNTFLLMRNSQVSPNEQTFASTFAACASLSRLVWGEQLHGNV 325
Query: 359 VLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQAL 418
GL + V S++ M+S C +++ A +F+ + +D+ WS +I GY+ G++
Sbjct: 326 FSLGLGDSLSVSNSMMKMYSTCAKLDSASVLFQGMRCRDIISWSTIIGGYSQAAFGEECF 385
Query: 419 NLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDG-----LSFFKSMQSNFGIEPSIEHY 473
F M+ G +P S+LS +++ G L+ + ++ N P+I
Sbjct: 386 KYFSWMRQA-GPQPTDFALASLLSVSGIMAVLEQGRQVHALALYLGLEQN----PTIRS- 439
Query: 474 LCLVDLLGRAGRFDLALKTIHE 495
L+++ + G A K E
Sbjct: 440 -ALINMYSKCGSIIEASKVFEE 460
Score = 122 bits (306), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 90/339 (26%), Positives = 162/339 (47%), Gaps = 13/339 (3%)
Query: 9 GSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQ 68
G E+ ++T+ M + V N TF ACA+++ + G+++H +V +G V
Sbjct: 278 GQEEKAVNTFLLMRNSQVSPNEQTFASTFAACASLSRLVWGEQLHGNVFSLGLGDSLSVS 337
Query: 69 TGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLG 128
++ MYS C+ S+ + M R R ++SW++II +S+A +E M G
Sbjct: 338 NSMMKMYSTCAKLDSASVLFQGM--RCRDIISWSTIIGGYSQAAFGEECFKYFSWMRQAG 395
Query: 129 LELSASTFVSV--VSG--CSFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEA 184
+ + S+ VSG QG +H LGL N + +++++MY+K G + EA
Sbjct: 396 PQPTDFALASLLSVSGIMAVLEQGRQVHALALYLGLEQNP-TIRSALINMYSKCGSIIEA 454
Query: 185 RSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQV 244
+F+E T IVS T +I GY G EA L + ++S PD V F++++ C+
Sbjct: 455 SKVFEEKDRTDIVSLTAMINGYAEHGKCEEAIDLFEKSLKLSFRPDDVTFISVLTACSHS 514
Query: 245 GNLFLALSMHSLLLKSGYNNEDPLDNL--LVSMYTKCGDLELARRVFDAV-LEKSVFLWT 301
G L L + L++ YN ++ +V + + G L A ++ + + +K +WT
Sbjct: 515 GQLDLGFQYFN-LMQENYNMRPAKEHYGCMVDLLCRAGRLNDAEKMINEMPWKKDDVVWT 573
Query: 302 SMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLS 340
+++ + G +R+L+ + P T TL+
Sbjct: 574 TLLRACKEKGDVERGRRAAQRILE--LDPTSFTTLVTLA 610
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 73/145 (50%), Gaps = 7/145 (4%)
Query: 354 IEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGM 413
IE+ + N ++++ Q+Q + G++ A++VF+++P +D+ W+A++ GY
Sbjct: 20 IEKSMHSNHVDTHSQLQDLI-----DSGKLRVARQVFDKMPRRDIKSWTAIMKGYVAATK 74
Query: 414 GDQALNLFYKMQ-HVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEH 472
++AL LF M+ G+ D V + L AC S + G S + F + S+
Sbjct: 75 PEEALILFSAMRVDPLGVSGDTYVLSVALKACGQSSNIAYGESLHAYAEKTF-LLSSVFV 133
Query: 473 YLCLVDLLGRAGRFDLALKTIHEMP 497
L+D+ R G+ D + + EMP
Sbjct: 134 GSALLDMYMRIGKIDKSCRVFAEMP 158
>gi|222613253|gb|EEE51385.1| hypothetical protein OsJ_32436 [Oryza sativa Japonica Group]
Length = 863
Score = 350 bits (899), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 185/617 (29%), Positives = 335/617 (54%), Gaps = 8/617 (1%)
Query: 2 IRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGF 61
I N + L + M + G+ + ++ ++CA ++ + G+++H+H +K F
Sbjct: 222 IAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCAAMSCLNTGRQLHAHAIKNKF 281
Query: 62 QQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVL 121
D V T ++D+Y+K + +R+ +P +V + N+++ RA L EA+ +
Sbjct: 282 SSDRVVGTAIVDVYAKANSLTDARRAFFGLPNH--TVETSNAMMVGLVRAGLGIEAMGLF 339
Query: 122 KEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAK 177
+ M + + V S C+ + QG +HC K G + +I + N+V+ +Y K
Sbjct: 340 QFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIKSGF-DVDICVNNAVLDLYGK 398
Query: 178 FGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNL 237
+ EA IF + + VSW II G+ ++ N+M R + PD + ++
Sbjct: 399 CKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILHFNEMLRFGMKPDDFTYGSV 458
Query: 238 ILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSV 297
+ CA + +L L +H ++KSG ++ + + +V MY KCG ++ A+++ D + + V
Sbjct: 459 LKACAALRSLEYGLMVHDKVIKSGLGSDAFVASTVVDMYCKCGIIDEAQKLHDRIGGQQV 518
Query: 298 FLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEY 357
W +++ G++ EA F +L ++P+ T AT L CA L ++ GK+I
Sbjct: 519 VSWNAILSGFSLNKESEEAQKFFSEMLDMGLKPDHFTFATVLDTCANLATIELGKQIHGQ 578
Query: 358 IVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQA 417
I+ + + + ++L+ M++KCG + + VFE+V +D W+AMI GYA+HG+G +A
Sbjct: 579 IIKQEMLDDEYISSTLVDMYAKCGDMPDSLLVFEKVEKRDFVSWNAMICGYALHGLGVEA 638
Query: 418 LNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLV 477
L +F +MQ E + P+ + ++L ACSH G+ DDG +F M +++ +EP +EH+ C+V
Sbjct: 639 LRMFERMQK-ENVVPNHATFVAVLRACSHVGLFDDGCRYFHLMTTHYKLEPQLEHFACMV 697
Query: 478 DLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTG 537
D+LGR+ A+K I+ MP + A +W LLS C +VE+ E AA N+L L+P +
Sbjct: 698 DILGRSKGPQEAVKFINSMPFQADAVIWKTLLSICKIRQDVEIAELAASNVLLLDPDDSS 757
Query: 538 NYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVD 597
YIL++N++ +G W + + R L+ RL KEPG S +E+ + F+ GD++H S +
Sbjct: 758 VYILLSNVYAESGKWADVSRTRRLLKQGRLKKEPGCSWIEVQSEMHGFLVGDKAHPRSGE 817
Query: 598 IRKTLKELHIKLLEAGY 614
+ + L +L ++ +GY
Sbjct: 818 LYEMLNDLIGEMKLSGY 834
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 118/461 (25%), Positives = 235/461 (50%), Gaps = 16/461 (3%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
++ G F+E++ + M + GV + TF ++LK+C+ + + G +VH+ +K G
Sbjct: 120 LVSGYCQRGMFQESVDLFVEMARRGVSPDRTTFAVLLKSCSALEELSLGVQVHALAVKTG 179
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAIL- 119
+ D + L+DMY KC + MP R+ VSW + I+ C+ +E +
Sbjct: 180 LEIDVRTGSALVDMYGKCRSLDDALCFFYGMPE--RNWVSWGAAIA----GCVQNEQYVR 233
Query: 120 ---VLKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVM 172
+ EM LGL +S ++ S C+ G +H K ++ + + +++
Sbjct: 234 GLELFIEMQRLGLGVSQPSYASAFRSCAAMSCLNTGRQLHAHAIKNKFSSDRV-VGTAIV 292
Query: 173 SMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLV 232
+YAK + +AR F + ++ + ++ G V G EA GL M R S+ D+V
Sbjct: 293 DVYAKANSLTDARRAFFGLPNHTVETSNAMMVGLVRAGLGIEAMGLFQFMIRSSIRFDVV 352
Query: 233 VFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAV 292
+ CA+ F +H L +KSG++ + ++N ++ +Y KC L A +F +
Sbjct: 353 SLSGVFSACAETKGYFQGQQVHCLAIKSGFDVDICVNNAVLDLYGKCKALMEAYLIFQGM 412
Query: 293 LEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGK 352
+K W ++I Q G+ + + F +L+ ++P++ T + L ACA L SL G
Sbjct: 413 KQKDSVSWNAIIAALEQNGHYDDTILHFNEMLRFGMKPDDFTYGSVLKACAALRSLEYGL 472
Query: 353 EIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHG 412
+ + ++ +GL S+ V ++++ M+ KCG I++A+++ +R+ + + W+A+++G++++
Sbjct: 473 MVHDKVIKSGLGSDAFVASTVVDMYCKCGIIDEAQKLHDRIGGQQVVSWNAILSGFSLNK 532
Query: 413 MGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDG 453
++A F +M + GLKPD + ++L C++ ++ G
Sbjct: 533 ESEEAQKFFSEMLDM-GLKPDHFTFATVLDTCANLATIELG 572
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 111/454 (24%), Positives = 216/454 (47%), Gaps = 12/454 (2%)
Query: 62 QQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVL 121
++D ++ YS D ++ + D MP VVSWN+++S + + + E++ +
Sbjct: 80 RRDTVSWNTMLTAYSHAGDISTAVALFDGMPDP--DVVSWNALVSGYCQRGMFQESVDLF 137
Query: 122 KEMWVLGLELSASTFVSVVSGCSFRQ----GISMHCCVYKLGLLNNEIPLANSVMSMYAK 177
EM G+ +TF ++ CS + G+ +H K GL ++ ++++ MY K
Sbjct: 138 VEMARRGVSPDRTTFAVLLKSCSALEELSLGVQVHALAVKTGL-EIDVRTGSALVDMYGK 196
Query: 178 FGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNL 237
+++A F + E + VSW I G V L +M+R+ + + +
Sbjct: 197 CRSLDDALCFFYGMPERNWVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASA 256
Query: 238 ILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSV 297
CA + L +H+ +K+ ++++ + +V +Y K L ARR F + +V
Sbjct: 257 FRSCAAMSCLNTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTV 316
Query: 298 FLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEY 357
+M+ G + G EA+ LF+ ++++S+R + +L+ SACAE +G+++
Sbjct: 317 ETSNAMMVGLVRAGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCL 376
Query: 358 IVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQA 417
+ +G + + V +++ ++ KC + +A +F+ + KD W+A+I +G D
Sbjct: 377 AIKSGFDVDICVNNAVLDLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDT 436
Query: 418 LNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFF-KSMQSNFGIEPSIEHYLCL 476
+ F +M G+KPD Y S+L AC+ ++ GL K ++S G + + +
Sbjct: 437 ILHFNEMLRF-GMKPDDFTYGSVLKACAALRSLEYGLMVHDKVIKSGLGSDAFVAS--TV 493
Query: 477 VDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLS 510
VD+ + G D A K +H+ Q W +LS
Sbjct: 494 VDMYCKCGIIDEAQK-LHDRIGGQQVVSWNAILS 526
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 114/267 (42%), Gaps = 34/267 (12%)
Query: 220 NQMRRMSVTPDLVVFLNLILGCAQVG---------------------NLFLA---LSMHS 255
Q + V P V F + CAQ G N F++ L M++
Sbjct: 4 EQQQPPPVAPARVTFSRVFQSCAQAGREALAAGRAAHARMVVSGFVPNAFVSNCLLQMYA 63
Query: 256 LLLK--------SGYNNEDPLD-NLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGG 306
D + N +++ Y+ GD+ A +FD + + V W +++ G
Sbjct: 64 RCAGAACARRVFDAMPRRDTVSWNTMLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSG 123
Query: 307 YAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESN 366
Y Q G E+V+LF + + V P+ T A L +C+ L LS G ++ V GLE +
Sbjct: 124 YCQRGMFQESVDLFVEMARRGVSPDRTTFAVLLKSCSALEELSLGVQVHALAVKTGLEID 183
Query: 367 RQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQH 426
+ ++L+ M+ KC ++ A F +P+++ W A I G + + L LF +MQ
Sbjct: 184 VRTGSALVDMYGKCRSLDDALCFFYGMPERNWVSWGAAIAGCVQNEQYVRGLELFIEMQR 243
Query: 427 VEGLKPDAVVYTSILSACSHSGMVDDG 453
+ GL Y S +C+ ++ G
Sbjct: 244 L-GLGVSQPSYASAFRSCAAMSCLNTG 269
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 96/227 (42%), Gaps = 36/227 (15%)
Query: 328 VRPNEATLATTLSACAELG--SLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINK 385
V P T + +CA+ G +L+ G+ +V++G N V L+ M+++C
Sbjct: 11 VAPARVTFSRVFQSCAQAGREALAAGRAAHARMVVSGFVPNAFVSNCLLQMYARCAGAAC 70
Query: 386 AKEVFER-------------------------------VPDKDLAVWSAMINGYAIHGMG 414
A+ VF+ +PD D+ W+A+++GY GM
Sbjct: 71 ARRVFDAMPRRDTVSWNTMLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRGMF 130
Query: 415 DQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYL 474
++++LF +M G+ PD + +L +CS + G+ ++ G+E +
Sbjct: 131 QESVDLFVEMAR-RGVSPDRTTFAVLLKSCSALEELSLGVQ-VHALAVKTGLEIDVRTGS 188
Query: 475 CLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELG 521
LVD+ G+ D AL + MP E W ++ C+++ G
Sbjct: 189 ALVDMYGKCRSLDDALCFFYGMP-ERNWVSWGAAIAGCVQNEQYVRG 234
>gi|14165320|gb|AAK55452.1|AC069300_7 putative PPR repeat protein [Oryza sativa Japonica Group]
gi|31433484|gb|AAP54989.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 905
Score = 350 bits (899), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 185/617 (29%), Positives = 335/617 (54%), Gaps = 8/617 (1%)
Query: 2 IRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGF 61
I N + L + M + G+ + ++ ++CA ++ + G+++H+H +K F
Sbjct: 264 IAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCAAMSCLNTGRQLHAHAIKNKF 323
Query: 62 QQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVL 121
D V T ++D+Y+K + +R+ +P +V + N+++ RA L EA+ +
Sbjct: 324 SSDRVVGTAIVDVYAKANSLTDARRAFFGLPNH--TVETSNAMMVGLVRAGLGIEAMGLF 381
Query: 122 KEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAK 177
+ M + + V S C+ + QG +HC K G + +I + N+V+ +Y K
Sbjct: 382 QFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIKSGF-DVDICVNNAVLDLYGK 440
Query: 178 FGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNL 237
+ EA IF + + VSW II G+ ++ N+M R + PD + ++
Sbjct: 441 CKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILHFNEMLRFGMKPDDFTYGSV 500
Query: 238 ILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSV 297
+ CA + +L L +H ++KSG ++ + + +V MY KCG ++ A+++ D + + V
Sbjct: 501 LKACAALRSLEYGLMVHDKVIKSGLGSDAFVASTVVDMYCKCGIIDEAQKLHDRIGGQQV 560
Query: 298 FLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEY 357
W +++ G++ EA F +L ++P+ T AT L CA L ++ GK+I
Sbjct: 561 VSWNAILSGFSLNKESEEAQKFFSEMLDMGLKPDHFTFATVLDTCANLATIELGKQIHGQ 620
Query: 358 IVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQA 417
I+ + + + ++L+ M++KCG + + VFE+V +D W+AMI GYA+HG+G +A
Sbjct: 621 IIKQEMLDDEYISSTLVDMYAKCGDMPDSLLVFEKVEKRDFVSWNAMICGYALHGLGVEA 680
Query: 418 LNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLV 477
L +F +MQ E + P+ + ++L ACSH G+ DDG +F M +++ +EP +EH+ C+V
Sbjct: 681 LRMFERMQK-ENVVPNHATFVAVLRACSHVGLFDDGCRYFHLMTTHYKLEPQLEHFACMV 739
Query: 478 DLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTG 537
D+LGR+ A+K I+ MP + A +W LLS C +VE+ E AA N+L L+P +
Sbjct: 740 DILGRSKGPQEAVKFINSMPFQADAVIWKTLLSICKIRQDVEIAELAASNVLLLDPDDSS 799
Query: 538 NYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVD 597
YIL++N++ +G W + + R L+ RL KEPG S +E+ + F+ GD++H S +
Sbjct: 800 VYILLSNVYAESGKWADVSRTRRLLKQGRLKKEPGCSWIEVQSEMHGFLVGDKAHPRSGE 859
Query: 598 IRKTLKELHIKLLEAGY 614
+ + L +L ++ +GY
Sbjct: 860 LYEMLNDLIGEMKLSGY 876
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 118/461 (25%), Positives = 235/461 (50%), Gaps = 16/461 (3%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
++ G F+E++ + M + GV + TF ++LK+C+ + + G +VH+ +K G
Sbjct: 162 LVSGYCQRGMFQESVDLFVEMARRGVSPDRTTFAVLLKSCSALEELSLGVQVHALAVKTG 221
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAIL- 119
+ D + L+DMY KC + MP R+ VSW + I+ C+ +E +
Sbjct: 222 LEIDVRTGSALVDMYGKCRSLDDALCFFYGMPE--RNWVSWGAAIA----GCVQNEQYVR 275
Query: 120 ---VLKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVM 172
+ EM LGL +S ++ S C+ G +H K ++ + + +++
Sbjct: 276 GLELFIEMQRLGLGVSQPSYASAFRSCAAMSCLNTGRQLHAHAIKNKFSSDRV-VGTAIV 334
Query: 173 SMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLV 232
+YAK + +AR F + ++ + ++ G V G EA GL M R S+ D+V
Sbjct: 335 DVYAKANSLTDARRAFFGLPNHTVETSNAMMVGLVRAGLGIEAMGLFQFMIRSSIRFDVV 394
Query: 233 VFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAV 292
+ CA+ F +H L +KSG++ + ++N ++ +Y KC L A +F +
Sbjct: 395 SLSGVFSACAETKGYFQGQQVHCLAIKSGFDVDICVNNAVLDLYGKCKALMEAYLIFQGM 454
Query: 293 LEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGK 352
+K W ++I Q G+ + + F +L+ ++P++ T + L ACA L SL G
Sbjct: 455 KQKDSVSWNAIIAALEQNGHYDDTILHFNEMLRFGMKPDDFTYGSVLKACAALRSLEYGL 514
Query: 353 EIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHG 412
+ + ++ +GL S+ V ++++ M+ KCG I++A+++ +R+ + + W+A+++G++++
Sbjct: 515 MVHDKVIKSGLGSDAFVASTVVDMYCKCGIIDEAQKLHDRIGGQQVVSWNAILSGFSLNK 574
Query: 413 MGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDG 453
++A F +M + GLKPD + ++L C++ ++ G
Sbjct: 575 ESEEAQKFFSEMLDM-GLKPDHFTFATVLDTCANLATIELG 614
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 111/454 (24%), Positives = 216/454 (47%), Gaps = 12/454 (2%)
Query: 62 QQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVL 121
++D ++ YS D ++ + D MP VVSWN+++S + + + E++ +
Sbjct: 122 RRDTVSWNTMLTAYSHAGDISTAVALFDGMPDP--DVVSWNALVSGYCQRGMFQESVDLF 179
Query: 122 KEMWVLGLELSASTFVSVVSGCSFRQ----GISMHCCVYKLGLLNNEIPLANSVMSMYAK 177
EM G+ +TF ++ CS + G+ +H K GL ++ ++++ MY K
Sbjct: 180 VEMARRGVSPDRTTFAVLLKSCSALEELSLGVQVHALAVKTGL-EIDVRTGSALVDMYGK 238
Query: 178 FGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNL 237
+++A F + E + VSW I G V L +M+R+ + + +
Sbjct: 239 CRSLDDALCFFYGMPERNWVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASA 298
Query: 238 ILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSV 297
CA + L +H+ +K+ ++++ + +V +Y K L ARR F + +V
Sbjct: 299 FRSCAAMSCLNTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTV 358
Query: 298 FLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEY 357
+M+ G + G EA+ LF+ ++++S+R + +L+ SACAE +G+++
Sbjct: 359 ETSNAMMVGLVRAGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCL 418
Query: 358 IVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQA 417
+ +G + + V +++ ++ KC + +A +F+ + KD W+A+I +G D
Sbjct: 419 AIKSGFDVDICVNNAVLDLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDT 478
Query: 418 LNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFF-KSMQSNFGIEPSIEHYLCL 476
+ F +M G+KPD Y S+L AC+ ++ GL K ++S G + + +
Sbjct: 479 ILHFNEMLRF-GMKPDDFTYGSVLKACAALRSLEYGLMVHDKVIKSGLGSDAFVAS--TV 535
Query: 477 VDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLS 510
VD+ + G D A K +H+ Q W +LS
Sbjct: 536 VDMYCKCGIIDEAQK-LHDRIGGQQVVSWNAILS 568
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 75/312 (24%), Positives = 144/312 (46%), Gaps = 32/312 (10%)
Query: 167 LANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAF---------- 216
++N ++ MYA+ AR +FD + VSW T++ Y + G+++ A
Sbjct: 96 VSNCLLQMYARCAGAACARRVFDAMPRRDTVSWNTMLTAYSHAGDISTAVALFDGMPDPD 155
Query: 217 ---------GLCN------------QMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHS 255
G C +M R V+PD F L+ C+ + L L + +H+
Sbjct: 156 VVSWNALVSGYCQRGMFQESVDLFVEMARRGVSPDRTTFAVLLKSCSALEELSLGVQVHA 215
Query: 256 LLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSE 315
L +K+G + + LV MY KC L+ A F + E++ W + I G Q
Sbjct: 216 LAVKTGLEIDVRTGSALVDMYGKCRSLDDALCFFYGMPERNWVSWGAAIAGCVQNEQYVR 275
Query: 316 AVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIH 375
+ LF + + + ++ + A+ +CA + L+ G+++ + + N S+R V T+++
Sbjct: 276 GLELFIEMQRLGLGVSQPSYASAFRSCAAMSCLNTGRQLHAHAIKNKFSSDRVVGTAIVD 335
Query: 376 MFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAV 435
+++K + A+ F +P+ + +AM+ G G+G +A+ LF M ++ D V
Sbjct: 336 VYAKANSLTDARRAFFGLPNHTVETSNAMMVGLVRAGLGIEAMGLFQFMIR-SSIRFDVV 394
Query: 436 VYTSILSACSHS 447
+ + SAC+ +
Sbjct: 395 SLSGVFSACAET 406
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 115/267 (43%), Gaps = 34/267 (12%)
Query: 220 NQMRRMSVTPDLVVFLNLILGCAQVGN--LFLALSMHSLLLKSGYNNEDPLDNLLVSMYT 277
Q + V P V F + CAQ G L + H+ ++ SG+ + N L+ MY
Sbjct: 46 EQQQPPPVAPARVTFSRVFQSCAQAGREALAAGRAAHARMVVSGFVPTAFVSNCLLQMYA 105
Query: 278 KCGDLELARRVFDAVLEK-------------------------------SVFLWTSMIGG 306
+C ARRVFDA+ + V W +++ G
Sbjct: 106 RCAGAACARRVFDAMPRRDTVSWNTMLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSG 165
Query: 307 YAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESN 366
Y Q G E+V+LF + + V P+ T A L +C+ L LS G ++ V GLE +
Sbjct: 166 YCQRGMFQESVDLFVEMARRGVSPDRTTFAVLLKSCSALEELSLGVQVHALAVKTGLEID 225
Query: 367 RQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQH 426
+ ++L+ M+ KC ++ A F +P+++ W A I G + + L LF +MQ
Sbjct: 226 VRTGSALVDMYGKCRSLDDALCFFYGMPERNWVSWGAAIAGCVQNEQYVRGLELFIEMQR 285
Query: 427 VEGLKPDAVVYTSILSACSHSGMVDDG 453
+ GL Y S +C+ ++ G
Sbjct: 286 L-GLGVSQPSYASAFRSCAAMSCLNTG 311
>gi|296088012|emb|CBI35295.3| unnamed protein product [Vitis vinifera]
Length = 645
Score = 350 bits (898), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 198/590 (33%), Positives = 317/590 (53%), Gaps = 46/590 (7%)
Query: 36 VLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRL 95
+L+AC S+ + K++H H LK D+ V L +Y C+ V +R++ DE+P
Sbjct: 14 LLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIPNP- 72
Query: 96 RSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCS----FRQGISM 151
SV+ WN II A++ D AI + M LG+ + T+ V+ CS G+ +
Sbjct: 73 -SVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVEI 131
Query: 152 HCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGN 211
H GL +++ + +++ YAK G + EA+ +F + +V+W +I G G
Sbjct: 132 HSHAKMFGL-ESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGL 190
Query: 212 VNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNL 271
++A L QM+ + P+ +
Sbjct: 191 CDDAVQLIMQMQEEGICPN--------------------------------------SST 212
Query: 272 LVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPN 331
+V + C L AR++FD + ++ W++MIGGY EA+++F+ + + + P+
Sbjct: 213 IVGVLPTCQCLLYARKIFDVMGVRNEVSWSAMIGGYVASDCMKEALDIFRMMQLSGIDPD 272
Query: 332 EATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFE 391
T+ L AC+ L +L G Y+++ G ++ + +LI M+SKCG+I+ A+EVF
Sbjct: 273 LTTMLGVLPACSHLAALQHGFCSHGYLIVRGFATDTLICNALIDMYSKCGKISFAREVFN 332
Query: 392 RVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVD 451
R+ D+ W+AMI GY IHG+G +AL LF+ + + GLKPD + + +LS+CSHSG+V
Sbjct: 333 RMDRHDIVSWNAMIIGYGIHGLGMEALGLFHDLLAL-GLKPDDITFICLLSSCSHSGLVM 391
Query: 452 DGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSA 511
+G +F +M +F I P +EH +C+VD+LGRAG D A I MP E ++W+ LLSA
Sbjct: 392 EGRLWFDAMSRDFSIVPRMEHCICMVDILGRAGLIDEAHHFIRNMPFEPDVRIWSALLSA 451
Query: 512 CMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEP 571
C H N+ELGE +K + +L P STGN++L++N++++AG W +AA R D L K P
Sbjct: 452 CRIHKNIELGEEVSKKIQSLGPESTGNFVLLSNIYSAAGRWDDAAHIRITQKDWGLKKIP 511
Query: 572 GWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKELHIKLLEAGYIAEADIV 621
G S +EI+G V FV GD+SH I + L+EL +++ GY AE V
Sbjct: 512 GCSWIEINGIVHAFVGGDQSHLQLSQINRKLEELLVEMKRLGYQAECSFV 561
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 136/478 (28%), Positives = 231/478 (48%), Gaps = 60/478 (12%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+IR NG F+ + Y SML GV N +T+P VLKAC+ + +I DG +HSH G
Sbjct: 80 IIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVEIHSHAKMFG 139
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+ D FV T L+D Y+KC V ++++ M R VV+WN++I+ S L D+A+ +
Sbjct: 140 LESDVFVCTALVDFYAKCGILVEAQRLFSSMS--HRDVVAWNAMIAGCSLYGLCDDAVQL 197
Query: 121 LKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGK 180
+ +M G+ ++ST V V+ C C +Y
Sbjct: 198 IMQMQEEGICPNSSTIVGVLPTC--------QCLLY------------------------ 225
Query: 181 VNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILG 240
AR IFD +G + VSW+ +IGGYV + EA + M+ + PDL L ++
Sbjct: 226 ---ARKIFDVMGVRNEVSWSAMIGGYVASDCMKEALDIFRMMQLSGIDPDLTTMLGVLPA 282
Query: 241 CAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLW 300
C+ + L H L+ G+ + + N L+ MY+KCG + AR VF+ + + W
Sbjct: 283 CSHLAALQHGFCSHGYLIVRGFATDTLICNALIDMYSKCGKISFAREVFNRMDRHDIVSW 342
Query: 301 TSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVL 360
+MI GY G EA+ LF LL ++P++ T LS+C+ G + +G+ +
Sbjct: 343 NAMIIGYGIHGLGMEALGLFHDLLALGLKPDDITFICLLSSCSHSGLVMEGR-----LWF 397
Query: 361 NGLESNRQVQTSLIH------MFSKCGRINKAKEVFERVP-DKDLAVWSAMINGYAIHGM 413
+ + + + + H + + G I++A +P + D+ +WSA+++ IH
Sbjct: 398 DAMSRDFSIVPRMEHCICMVDILGRAGLIDEAHHFIRNMPFEPDVRIWSALLSACRIHKN 457
Query: 414 GDQALNLFYKMQHVEGLKPDA----VVYTSILSACSHSGMVDDGLSFFKSMQSNFGIE 467
+ + K+Q L P++ V+ ++I SA +G DD + + Q ++G++
Sbjct: 458 IELGEEVSKKIQ---SLGPESTGNFVLLSNIYSA---AGRWDDA-AHIRITQKDWGLK 508
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 71/212 (33%), Positives = 118/212 (55%), Gaps = 1/212 (0%)
Query: 234 FLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVL 293
+L+L+ C Q +L A +H LK+ N + + + L +Y C + LARR+FD +
Sbjct: 11 YLHLLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIP 70
Query: 294 EKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKE 353
SV LW +I YA G A++L+ +L VRPN+ T L AC+ L ++ G E
Sbjct: 71 NPSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVE 130
Query: 354 IEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGM 413
I + + GLES+ V T+L+ ++KCG + +A+ +F + +D+ W+AMI G +++G+
Sbjct: 131 IHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGL 190
Query: 414 GDQALNLFYKMQHVEGLKPDAVVYTSILSACS 445
D A+ L +MQ EG+ P++ +L C
Sbjct: 191 CDDAVQLIMQMQE-EGICPNSSTIVGVLPTCQ 221
>gi|242082744|ref|XP_002441797.1| hypothetical protein SORBIDRAFT_08g002505 [Sorghum bicolor]
gi|241942490|gb|EES15635.1| hypothetical protein SORBIDRAFT_08g002505 [Sorghum bicolor]
Length = 839
Score = 350 bits (898), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 187/617 (30%), Positives = 324/617 (52%), Gaps = 8/617 (1%)
Query: 2 IRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGF 61
I N + L + M + G+ + + V ++CA I + +++H+H +K F
Sbjct: 209 IAGCVQNEQYTRGLELFVQMQRLGLGVSQPAYASVFRSCAAITCLSTARQLHAHAIKNKF 268
Query: 62 QQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVL 121
D V T ++D+Y+K V +R+ +P +V + N+++ R L EA+ +
Sbjct: 269 SADRVVGTAIVDVYAKADSLVDARRAFFSLPNH--TVQACNAMMVGLVRTGLGAEALQLF 326
Query: 122 KEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAK 177
+ M G+ + V S C+ + QG+ +HC K G + ++ + N+++ +Y K
Sbjct: 327 QFMTRSGIGFDVVSLSGVFSACAEVKGYLQGLQVHCLAIKSGF-DVDVCVRNAILDLYGK 385
Query: 178 FGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNL 237
+ EA +F E+ + VSW II + N+M R + PD + ++
Sbjct: 386 CKALVEAYLVFQEMEQRDSVSWNAIIAALEQNECYEDTIAYLNEMLRYGMEPDDFTYGSV 445
Query: 238 ILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSV 297
+ CA + +L +H +KSG + + + +V MY KCG + A+++ D + + +
Sbjct: 446 LKACAGLQSLEYGSVVHGKAIKSGLGLDAFVSSTVVDMYCKCGMITEAQKLHDRIGGQEL 505
Query: 298 FLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEY 357
W S+I G++ EA F +L V+P+ T AT L CA L ++ GK+I
Sbjct: 506 VSWNSIISGFSLNKQSEEAQKFFSEMLDIGVKPDHFTYATVLDTCANLATIELGKQIHGQ 565
Query: 358 IVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQA 417
I+ + + + ++L+ M++KCG + + +FE+ D W+AMI GYA+HG G +A
Sbjct: 566 IIKQEMLGDEYISSTLVDMYAKCGNMPDSLLMFEKAQKLDFVSWNAMICGYALHGQGFEA 625
Query: 418 LNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLV 477
L +F +MQ + P+ + ++L ACSH G++DDG +F M S + +EP +EH+ C+V
Sbjct: 626 LEMFERMQQAN-VVPNHATFVAVLRACSHVGLLDDGCRYFYLMTSRYKLEPQLEHFACMV 684
Query: 478 DLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTG 537
D+LGR+ ALK I MP+E A +W LLS C +VE+ E AA N+L L+P +
Sbjct: 685 DILGRSKGPQEALKFIRSMPLEADAVIWKTLLSICKIRQDVEVAETAASNVLRLDPDDSS 744
Query: 538 NYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVD 597
YIL++N++ +G W + + R LM RL KEPG S +E+ + F+AGD+ H S +
Sbjct: 745 VYILLSNVYAESGKWVDVSRTRRLMRQGRLKKEPGCSWIEVQSEMHGFLAGDKVHPRSRE 804
Query: 598 IRKTLKELHIKLLEAGY 614
+ + L L +++ +GY
Sbjct: 805 VYEMLNNLIVEMKLSGY 821
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 112/461 (24%), Positives = 222/461 (48%), Gaps = 16/461 (3%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
++ G F +++ M + GV + T ++LKAC + + G ++H+ +K G
Sbjct: 107 LLSGYCQRGMFRDSVGLSVEMARRGVAPDRTTLAVLLKACGGLEDLALGVQIHAVAVKTG 166
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDE---- 116
+ D + L+DMY KC + + M R+ VSW + I+ C+ +E
Sbjct: 167 LEMDVRAGSALVDMYGKCRSLEDALRFFHGMGE--RNSVSWGAAIA----GCVQNEQYTR 220
Query: 117 AILVLKEMWVLGLELSASTFVSVVSGCSFRQGIS----MHCCVYKLGLLNNEIPLANSVM 172
+ + +M LGL +S + SV C+ +S +H K + + + +++
Sbjct: 221 GLELFVQMQRLGLGVSQPAYASVFRSCAAITCLSTARQLHAHAIKNKFSADRV-VGTAIV 279
Query: 173 SMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLV 232
+YAK + +AR F + ++ + ++ G V G EA L M R + D+V
Sbjct: 280 DVYAKADSLVDARRAFFSLPNHTVQACNAMMVGLVRTGLGAEALQLFQFMTRSGIGFDVV 339
Query: 233 VFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAV 292
+ CA+V L +H L +KSG++ + + N ++ +Y KC L A VF +
Sbjct: 340 SLSGVFSACAEVKGYLQGLQVHCLAIKSGFDVDVCVRNAILDLYGKCKALVEAYLVFQEM 399
Query: 293 LEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGK 352
++ W ++I Q + + +L+ + P++ T + L ACA L SL G
Sbjct: 400 EQRDSVSWNAIIAALEQNECYEDTIAYLNEMLRYGMEPDDFTYGSVLKACAGLQSLEYGS 459
Query: 353 EIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHG 412
+ + +GL + V ++++ M+ KCG I +A+++ +R+ ++L W+++I+G++++
Sbjct: 460 VVHGKAIKSGLGLDAFVSSTVVDMYCKCGMITEAQKLHDRIGGQELVSWNSIISGFSLNK 519
Query: 413 MGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDG 453
++A F +M + G+KPD Y ++L C++ ++ G
Sbjct: 520 QSEEAQKFFSEMLDI-GVKPDHFTYATVLDTCANLATIELG 559
Score = 145 bits (367), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 112/496 (22%), Positives = 225/496 (45%), Gaps = 40/496 (8%)
Query: 32 TFPLVLKACANI--NSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLD 89
TF + + CA +++ G+ H+ +L GF FV L+ MY++C +R V D
Sbjct: 4 TFSHLYQLCAGAGRSALATGQAAHARMLVSGFMPTTFVSNCLLQMYARCGGAAHARGVFD 63
Query: 90 EMPVRLR-----------------------------SVVSWNSIISAHSRACLNDEAILV 120
MP R VVSWN+++S + + + +++ +
Sbjct: 64 VMPHRDTVSWNTMLTAYAHAGDTGAAASLFGAMPDPDVVSWNALLSGYCQRGMFRDSVGL 123
Query: 121 LKEMWVLGLELSASTFVSVVSGCSFRQ----GISMHCCVYKLGLLNNEIPLANSVMSMYA 176
EM G+ +T ++ C + G+ +H K GL ++ ++++ MY
Sbjct: 124 SVEMARRGVAPDRTTLAVLLKACGGLEDLALGVQIHAVAVKTGL-EMDVRAGSALVDMYG 182
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K + +A F +GE + VSW I G V L QM+R+ + + +
Sbjct: 183 KCRSLEDALRFFHGMGERNSVSWGAAIAGCVQNEQYTRGLELFVQMQRLGLGVSQPAYAS 242
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
+ CA + L A +H+ +K+ ++ + + +V +Y K L ARR F ++ +
Sbjct: 243 VFRSCAAITCLSTARQLHAHAIKNKFSADRVVGTAIVDVYAKADSLVDARRAFFSLPNHT 302
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEE 356
V +M+ G + G +EA+ LF+ + ++ + + +L+ SACAE+ +G ++
Sbjct: 303 VQACNAMMVGLVRTGLGAEALQLFQFMTRSGIGFDVVSLSGVFSACAEVKGYLQGLQVHC 362
Query: 357 YIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQ 416
+ +G + + V+ +++ ++ KC + +A VF+ + +D W+A+I + +
Sbjct: 363 LAIKSGFDVDVCVRNAILDLYGKCKALVEAYLVFQEMEQRDSVSWNAIIAALEQNECYED 422
Query: 417 ALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDG-LSFFKSMQSNFGIEPSIEHYLC 475
+ +M G++PD Y S+L AC+ ++ G + K+++S G++ +
Sbjct: 423 TIAYLNEMLRY-GMEPDDFTYGSVLKACAGLQSLEYGSVVHGKAIKSGLGLDAFVSS--T 479
Query: 476 LVDLLGRAGRFDLALK 491
+VD+ + G A K
Sbjct: 480 VVDMYCKCGMITEAQK 495
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 84/329 (25%), Positives = 159/329 (48%), Gaps = 4/329 (1%)
Query: 169 NSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVT 228
N++++ YA G A S+F + + +VSW ++ GY G ++ GL +M R V
Sbjct: 74 NTMLTAYAHAGDTGAAASLFGAMPDPDVVSWNALLSGYCQRGMFRDSVGLSVEMARRGVA 133
Query: 229 PDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRV 288
PD L+ C + +L L + +H++ +K+G + + LV MY KC LE A R
Sbjct: 134 PDRTTLAVLLKACGGLEDLALGVQIHAVAVKTGLEMDVRAGSALVDMYGKCRSLEDALRF 193
Query: 289 FDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSL 348
F + E++ W + I G Q + + LF ++ + + ++ A+ +CA + L
Sbjct: 194 FHGMGERNSVSWGAAIAGCVQNEQYTRGLELFVQMQRLGLGVSQPAYASVFRSCAAITCL 253
Query: 349 SKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGY 408
S +++ + + N ++R V T+++ +++K + A+ F +P+ + +AM+ G
Sbjct: 254 STARQLHAHAIKNKFSADRVVGTAIVDVYAKADSLVDARRAFFSLPNHTVQACNAMMVGL 313
Query: 409 AIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFF-KSMQSNFGIE 467
G+G +AL LF M G+ D V + + SAC+ GL +++S F ++
Sbjct: 314 VRTGLGAEALQLFQFMTR-SGIGFDVVSLSGVFSACAEVKGYLQGLQVHCLAIKSGFDVD 372
Query: 468 PSIEHYLCLVDLLGRAGRFDLALKTIHEM 496
+ + ++DL G+ A EM
Sbjct: 373 VCVRN--AILDLYGKCKALVEAYLVFQEM 399
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 76/170 (44%), Gaps = 11/170 (6%)
Query: 333 ATLATTLSACAELG--SLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVF 390
AT + CA G +L+ G+ ++++G V L+ M+++CG A+ VF
Sbjct: 3 ATFSHLYQLCAGAGRSALATGQAAHARMLVSGFMPTTFVSNCLLQMYARCGGAAHARGVF 62
Query: 391 ERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMV 450
+ +P +D W+ M+ YA G A +LF M PD V + ++LS GM
Sbjct: 63 DVMPHRDTVSWNTMLTAYAHAGDTGAAASLFGAMP-----DPDVVSWNALLSGYCQRGMF 117
Query: 451 DDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKT-IHEMPVE 499
D + M + G+ P L+ G G DLAL IH + V+
Sbjct: 118 RDSVGLSVEM-ARRGVAPDRTTLAVLLKACG--GLEDLALGVQIHAVAVK 164
>gi|413944893|gb|AFW77542.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 829
Score = 350 bits (898), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 206/628 (32%), Positives = 353/628 (56%), Gaps = 23/628 (3%)
Query: 6 TNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKAC-ANINSIWDGKRVHSHVLKVGF-QQ 63
+ NG+ E L + L+ G+ N+FT +AC A+ G V V K+GF
Sbjct: 128 SRNGAEAEALRLFGETLEEGLLPNAFTLCAATQACFASELFHLAGGAVLGLVFKLGFWGT 187
Query: 64 DAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKE 123
D V LIDM++K D V+ R+V D + R +VV W +I+ ++++ +DEA+ + +
Sbjct: 188 DVSVGCALIDMFAKNGDLVAMRRVFDGLFER--TVVVWTLLITRYAQSGYSDEAVELFLD 245
Query: 124 MWVLGLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKF- 178
M G + T S++S C SFR G +H +LGL ++ ++ ++ MYAK
Sbjct: 246 MLENGFQPDQYTLSSMLSACTELGSFRLGQQLHSLALRLGLESDSC-VSCGLVDMYAKSH 304
Query: 179 --GKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNV-NEAFGLCNQMRRMSVTPDLVVFL 235
++ AR +F+ + + ++++WT ++ GYV G+ N+ L +M + P+ + +
Sbjct: 305 NGQSLHNAREVFNRMPKHNVMAWTALLSGYVQRGSQDNQVMILFCKMLNEGIRPNHITYS 364
Query: 236 NLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEK 295
+++ CA +G+ +H+ +KS + + + N LVSMY + G +E AR FD + EK
Sbjct: 365 SMLKACANLGDQDSGRQIHTHCVKSNLADLNVVGNALVSMYAESGSIEEARHAFDQLYEK 424
Query: 296 SVFLWTSMIGGYAQLGYPSEAVNLFK--RLLKTSVRPNEATLATTLSACAELGSLSKGKE 353
++ ++ + G + N ++ ++ + + + T + +SA A +G L+KG+
Sbjct: 425 NMVSFSGNLDGDGR-------SNTYQDYQIERMELGISTFTFGSLISAAASVGMLTKGQR 477
Query: 354 IEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGM 413
+ + G S+R + SL+ M+S+CG + A +VF+ + D ++ W++MI+G A HG
Sbjct: 478 LHALSLKAGFGSDRAIGNSLVSMYSRCGYLVDACQVFDEMNDHNVISWTSMISGLAKHGY 537
Query: 414 GDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHY 473
+AL LF+ M G+KP+ V Y ++LSACSH+G+V +G F+ MQ + G+ P +EHY
Sbjct: 538 AARALELFHDMI-AAGVKPNDVTYIAVLSACSHAGLVKEGKEHFRMMQKHHGLIPRMEHY 596
Query: 474 LCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNP 533
C+VDLLGR+G + AL I+EMP +V A VW LL AC H+N+++GE AA +++ L P
Sbjct: 597 ACMVDLLGRSGLVEDALDFINEMPCQVDALVWKTLLGACKTHNNMDIGEIAANHVIQLEP 656
Query: 534 GSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHH 593
Y+L++NL+ AG+W + A R LM D+ L KE G S + +D ++ F AGD SH
Sbjct: 657 QDPAPYVLLSNLYAEAGLWDQVARIRSLMRDKNLMKEKGLSWMHVDNTIHEFRAGDTSHP 716
Query: 594 LSVDIRKTLKELHIKLLEAGYIAEADIV 621
+ +I L+ L ++ GY+ + +V
Sbjct: 717 QAEEIYTKLETLIREIKVMGYVPDTSVV 744
Score = 201 bits (512), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 151/527 (28%), Positives = 256/527 (48%), Gaps = 38/527 (7%)
Query: 49 GKRVHSHVLKVG--FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIIS 106
G+ + H+L+ G + DA V L+ +YSKCS ++R V D MPV LR +VSW ++ S
Sbjct: 66 GRALQGHLLRTGSLLETDAVVANSLLTLYSKCSAVAAARSVFDGMPVGLRDLVSWTAMAS 125
Query: 107 AHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCSFRQ-----GISMHCCVYKLGLL 161
SR EA+ + E GL +A T + C + G ++ V+KLG
Sbjct: 126 CLSRNGAEAEALRLFGETLEEGLLPNAFTLCAATQACFASELFHLAGGAVLGLVFKLGFW 185
Query: 162 NNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQ 221
++ + +++ M+AK G + R +FD + E ++V WT +I Y G +EA L
Sbjct: 186 GTDVSVGCALIDMFAKNGDLVAMRRVFDGLFERTVVVWTLLITRYAQSGYSDEAVELFLD 245
Query: 222 MRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGD 281
M PD +++ C ++G+ L +HSL L+ G ++ + LV MY K +
Sbjct: 246 MLENGFQPDQYTLSSMLSACTELGSFRLGQQLHSLALRLGLESDSCVSCGLVDMYAKSHN 305
Query: 282 ---LELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVN-LFKRLLKTSVRPNEATLAT 337
L AR VF+ + + +V WT+++ GY Q G V LF ++L +RPN T ++
Sbjct: 306 GQSLHNAREVFNRMPKHNVMAWTALLSGYVQRGSQDNQVMILFCKMLNEGIRPNHITYSS 365
Query: 338 TLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKD 397
L ACA LG G++I + V + L V +L+ M+++ G I +A+ F+++ +K+
Sbjct: 366 MLKACANLGDQDSGRQIHTHCVKSNLADLNVVGNALVSMYAESGSIEEARHAFDQLYEKN 425
Query: 398 LAVWSAMINGYAIHGMGDQALNLF--YKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLS 455
+ +S ++ GD N + Y+++ +E L + S++SA + GM+ G
Sbjct: 426 MVSFSGNLD-------GDGRSNTYQDYQIERME-LGISTFTFGSLISAAASVGMLTKGQR 477
Query: 456 FFK-SMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMK 514
S+++ FG + +I + LV + R G A + EM + W ++S K
Sbjct: 478 LHALSLKAGFGSDRAIGN--SLVSMYSRCGYLVDACQVFDEMN-DHNVISWTSMISGLAK 534
Query: 515 HHNVELGEYAAKNLLTLN----PGSTGN---YILMANLFTSAGMWKE 554
H YAA+ L + G N YI + + + AG+ KE
Sbjct: 535 H------GYAARALELFHDMIAAGVKPNDVTYIAVLSACSHAGLVKE 575
Score = 191 bits (486), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 136/471 (28%), Positives = 243/471 (51%), Gaps = 40/471 (8%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+I +G +E + + ML+ G + +T +L AC + S G+++HS L++G
Sbjct: 226 LITRYAQSGYSDEAVELFLDMLENGFQPDQYTLSSMLSACTELGSFRLGQQLHSLALRLG 285
Query: 61 FQQDAFVQTGLIDMYSKCSDFVS---SRKVLDEMPVRLRSVVSWNSIISAH-SRACLNDE 116
+ D+ V GL+DMY+K + S +R+V + MP +V++W +++S + R +++
Sbjct: 286 LESDSCVSCGLVDMYAKSHNGQSLHNAREVFNRMPK--HNVMAWTALLSGYVQRGSQDNQ 343
Query: 117 AILVLKEMWVLGLELSASTFVSVVSGC-------SFRQGISMHCCVYKLGLLNNEIPLAN 169
+++ +M G+ + T+ S++ C S RQ I HC L LN + N
Sbjct: 344 VMILFCKMLNEGIRPNHITYSSMLKACANLGDQDSGRQ-IHTHCVKSNLADLN---VVGN 399
Query: 170 SVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTP 229
+++SMYA+ G + EAR FD++ E ++VS++ + G N + + Q+ RM +
Sbjct: 400 ALVSMYAESGSIEEARHAFDQLYEKNMVSFSGNLDGD-GRSNTYQDY----QIERMELGI 454
Query: 230 DLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVF 289
F +LI A VG L +H+L LK+G+ ++ + N LVSMY++CG L A +VF
Sbjct: 455 STFTFGSLISAAASVGMLTKGQRLHALSLKAGFGSDRAIGNSLVSMYSRCGYLVDACQVF 514
Query: 290 DAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLS 349
D + + +V WTSMI G A+ GY + A+ LF ++ V+PN+ T LSAC+ G +
Sbjct: 515 DEMNDHNVISWTSMISGLAKHGYAARALELFHDMIAAGVKPNDVTYIAVLSACSHAGLVK 574
Query: 350 KGKE----IEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDK-DLAVWSAM 404
+GKE ++++ +GL + ++ + + G + A + +P + D VW +
Sbjct: 575 EGKEHFRMMQKH---HGLIPRMEHYACMVDLLGRSGLVEDALDFINEMPCQVDALVWKTL 631
Query: 405 INGYAIHG---MGDQALNLFYKMQHVEGLKP-DAVVYTSILSACSHSGMVD 451
+ H +G+ A N HV L+P D Y + + + +G+ D
Sbjct: 632 LGACKTHNNMDIGEIAAN------HVIQLEPQDPAPYVLLSNLYAEAGLWD 676
>gi|225456713|ref|XP_002267998.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 618
Score = 350 bits (898), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 198/576 (34%), Positives = 325/576 (56%), Gaps = 47/576 (8%)
Query: 84 SRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGC 143
+R+V D++P + V S I+A+SR LN+EA+ M + + T + C
Sbjct: 49 ARQVFDQIPHPDQGVHC--SFITAYSRLSLNNEALRTFVSMHQNNVRIVCFTIPPIFKSC 106
Query: 144 S----FRQGISMHCCVYKLG----------LLN-----NEIPLA---------------N 169
+ G +H V + G L+N N++ A N
Sbjct: 107 ASLLAIDVGKQVHSLVIRYGFHSSVFCQNALINFYAKINDLGSAELIFDGILVKDTIAYN 166
Query: 170 SVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTP 229
++S Y++ G+V AR +FD++ + SIVSW +I Y G+ ++ + + +M+ P
Sbjct: 167 CLISAYSRSGEVLAARELFDKMRDRSIVSWNAMISCYAQNGDYHKGWIIFQRMQDEMCEP 226
Query: 230 DLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVS-----MYTKCGDLEL 284
+ + ++ CA++G+L + L + L +N++ N++VS MY KCG ++
Sbjct: 227 NEITLATVLSICAKLGDLEMGLRIKKL-----NDNKNLGSNMIVSTAMLEMYVKCGAVDD 281
Query: 285 ARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAE 344
R VFD + + V W++MI GYAQ G +EA+ LF+ + ++PN+ TL + LSACA+
Sbjct: 282 GRLVFDHMARRDVVTWSAMIAGYAQNGRSNEALELFENMKSAQIKPNDVTLVSVLSACAQ 341
Query: 345 LGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAM 404
LGS+ G+ I Y+ GL SN V ++L+ M+SKCG I KA+++F+++P +D W++M
Sbjct: 342 LGSVETGERIGSYVESRGLISNVYVASALLGMYSKCGNIIKARQIFDKLPQRDNVTWNSM 401
Query: 405 INGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNF 464
I G AI+G + A+ L+ +M+ +E +KP+ + + +++AC+H+G V+ GL FF+SM+S+
Sbjct: 402 IMGLAINGFAEDAIALYNRMKEIE-VKPNNITFVGLMTACTHAGHVELGLEFFRSMRSDH 460
Query: 465 GIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYA 524
I P+IEH+ C+VDL R+GR A + I M VE +W LLSA H NVEL E A
Sbjct: 461 NISPNIEHFACIVDLFCRSGRLIDAYEFICRMEVEPNVVIWGTLLSASRIHLNVELAELA 520
Query: 525 AKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQV 584
K LL L P ++GNY++++N++ SAG W+EA R LM D+R+ K +S VE++ V
Sbjct: 521 GKKLLELEPDNSGNYVILSNIYASAGRWQEALKVRKLMKDKRVQKAAAYSWVEVEDRVHK 580
Query: 585 FVAGDRSHHLSVDIRKTLKELHIKLLEAGYIAEADI 620
F+ GD SH S ++ T+ L + GY + +I
Sbjct: 581 FLVGDTSHPRSDEVYSTIDGLALLSTWVGYELDFEI 616
Score = 189 bits (480), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 122/450 (27%), Positives = 221/450 (49%), Gaps = 52/450 (11%)
Query: 3 RNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQ 62
R S NN E L T+ SM Q V FT P + K+CA++ +I GK+VHS V++ GF
Sbjct: 73 RLSLNN----EALRTFVSMHQNNVRIVCFTIPPIFKSCASLLAIDVGKQVHSLVIRYGFH 128
Query: 63 QDAFVQTGLIDMYSKCSDF-------------------------------VSSRKVLDEM 91
F Q LI+ Y+K +D +++R++ D+M
Sbjct: 129 SSVFCQNALINFYAKINDLGSAELIFDGILVKDTIAYNCLISAYSRSGEVLAARELFDKM 188
Query: 92 PVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCSFRQGISM 151
R RS+VSWN++IS +++ + ++ + M E + T +V+S C+ + M
Sbjct: 189 --RDRSIVSWNAMISCYAQNGDYHKGWIIFQRMQDEMCEPNEITLATVLSICAKLGDLEM 246
Query: 152 HCCVYKLGL---LNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVN 208
+ KL L + + ++ +++ MY K G V++ R +FD + +V+W+ +I GY
Sbjct: 247 GLRIKKLNDNKNLGSNMIVSTAMLEMYVKCGAVDDGRLVFDHMARRDVVTWSAMIAGYAQ 306
Query: 209 VGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPL 268
G NEA L M+ + P+ V ++++ CAQ+G++ + S + G + +
Sbjct: 307 NGRSNEALELFENMKSAQIKPNDVTLVSVLSACAQLGSVETGERIGSYVESRGLISNVYV 366
Query: 269 DNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSV 328
+ L+ MY+KCG++ AR++FD + ++ W SMI G A G+ +A+ L+ R+ + V
Sbjct: 367 ASALLGMYSKCGNIIKARQIFDKLPQRDNVTWNSMIMGLAINGFAEDAIALYNRMKEIEV 426
Query: 329 RPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIH------MFSKCGR 382
+PN T ++AC G + G E + S+ + ++ H +F + GR
Sbjct: 427 KPNNITFVGLMTACTHAGHVELGLEF-----FRSMRSDHNISPNIEHFACIVDLFCRSGR 481
Query: 383 INKAKEVFERVP-DKDLAVWSAMINGYAIH 411
+ A E R+ + ++ +W +++ IH
Sbjct: 482 LIDAYEFICRMEVEPNVVIWGTLLSASRIH 511
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 91/304 (29%), Positives = 150/304 (49%), Gaps = 32/304 (10%)
Query: 181 VNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILG 240
+ AR +FD+I + I Y + NEA M + +V +
Sbjct: 46 IQYARQVFDQIPHPDQGVHCSFITAYSRLSLNNEALRTFVSMHQNNVRIVCFTIPPIFKS 105
Query: 241 CAQVGNLFLALSMHSLLLKSGYNN------------------------------EDPLD- 269
CA + + + +HSL+++ G+++ +D +
Sbjct: 106 CASLLAIDVGKQVHSLVIRYGFHSSVFCQNALINFYAKINDLGSAELIFDGILVKDTIAY 165
Query: 270 NLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVR 329
N L+S Y++ G++ AR +FD + ++S+ W +MI YAQ G + +F+R+
Sbjct: 166 NCLISAYSRSGEVLAARELFDKMRDRSIVSWNAMISCYAQNGDYHKGWIIFQRMQDEMCE 225
Query: 330 PNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEV 389
PNE TLAT LS CA+LG L G I++ L SN V T+++ M+ KCG ++ + V
Sbjct: 226 PNEITLATVLSICAKLGDLEMGLRIKKLNDNKNLGSNMIVSTAMLEMYVKCGAVDDGRLV 285
Query: 390 FERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGM 449
F+ + +D+ WSAMI GYA +G ++AL LF M+ + +KP+ V S+LSAC+ G
Sbjct: 286 FDHMARRDVVTWSAMIAGYAQNGRSNEALELFENMKSAQ-IKPNDVTLVSVLSACAQLGS 344
Query: 450 VDDG 453
V+ G
Sbjct: 345 VETG 348
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 80/319 (25%), Positives = 152/319 (47%), Gaps = 23/319 (7%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI NG + + + M N T VL CA + + G R+
Sbjct: 199 MISCYAQNGDYHKGWIIFQRMQDEMCEPNEITLATVLSICAKLGDLEMGLRIKKLNDNKN 258
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+ V T +++MY KC R V D M R VV+W+++I+ +++ ++EA+ +
Sbjct: 259 LGSNMIVSTAMLEMYVKCGAVDDGRLVFDHMA--RRDVVTWSAMIAGYAQNGRSNEALEL 316
Query: 121 LKEMWVLGLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
+ M ++ + T VSV+S C S G + V GL++N + +A++++ MY+
Sbjct: 317 FENMKSAQIKPNDVTLVSVLSACAQLGSVETGERIGSYVESRGLISN-VYVASALLGMYS 375
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K G + +AR IFD++ + V+W ++I G G +A L N+M+ + V P+ + F+
Sbjct: 376 KCGNIIKARQIFDKLPQRDNVTWNSMIMGLAINGFAEDAIALYNRMKEIEVKPNNITFVG 435
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNL--LVSMYTKCGDLELARRVFDAV-- 292
L+ C G++ L L ++S +N +++ +V ++ + G R+ DA
Sbjct: 436 LMTACTHAGHVELGLEFFR-SMRSDHNISPNIEHFACIVDLFCRSG------RLIDAYEF 488
Query: 293 -----LEKSVFLWTSMIGG 306
+E +V +W +++
Sbjct: 489 ICRMEVEPNVVIWGTLLSA 507
Score = 75.5 bits (184), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 97/208 (46%), Gaps = 32/208 (15%)
Query: 282 LELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSA 341
++ AR+VFD + + S I Y++L +EA+ F + + +VR T+ +
Sbjct: 46 IQYARQVFDQIPHPDQGVHCSFITAYSRLSLNNEALRTFVSMHQNNVRIVCFTIPPIFKS 105
Query: 342 CAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHM------------------------- 376
CA L ++ GK++ ++ G S+ Q +LI+
Sbjct: 106 CASLLAIDVGKQVHSLVIRYGFHSSVFCQNALINFYAKINDLGSAELIFDGILVKDTIAY 165
Query: 377 ------FSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGL 430
+S+ G + A+E+F+++ D+ + W+AMI+ YA +G + +F +MQ E
Sbjct: 166 NCLISAYSRSGEVLAARELFDKMRDRSIVSWNAMISCYAQNGDYHKGWIIFQRMQD-EMC 224
Query: 431 KPDAVVYTSILSACSHSGMVDDGLSFFK 458
+P+ + ++LS C+ G ++ GL K
Sbjct: 225 EPNEITLATVLSICAKLGDLEMGLRIKK 252
>gi|225450565|ref|XP_002281942.1| PREDICTED: pentatricopeptide repeat-containing protein At5g48910
isoform 1 [Vitis vinifera]
Length = 672
Score = 350 bits (898), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 207/580 (35%), Positives = 313/580 (53%), Gaps = 64/580 (11%)
Query: 50 KRVHSHVLKVGFQQDAFVQTGLIDMYSKCS-----DFVSSRKVLDEMPVRLRSVVSWNSI 104
K+ H+ +L+ G QD+++ L+ Y+ S F SS +V D VR +V WN +
Sbjct: 51 KQAHALILRTGHLQDSYIAGSLVKSYANVSTNRYLSFESSLRVFD--FVRKPNVFLWNCM 108
Query: 105 ISAHSRACLND----EAILVLKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVY 156
I + C+ + +AIL+ EM V + T+ +V+ CS +G+ +H +
Sbjct: 109 I----KVCIENNEPFKAILLYYEMMVAHFRPNKYTYPAVLKACSDAGVVAEGVQVHAHLV 164
Query: 157 KLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIG-ETSIVSWTTIIGGYVNVGNVNEA 215
K GL + + +S + MYA FG++ EAR I D+ G E V W +I GY+ G V A
Sbjct: 165 KHGL-GGDGHILSSAIRMYASFGRLVEARRILDDKGGEVDAVCWNAMIDGYLRFGEVEAA 223
Query: 216 FGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSM 275
L M PD SM S N ++S
Sbjct: 224 RELFEGM------PDR--------------------SMISTW------------NAMISG 245
Query: 276 YTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATL 335
+++CG +E+AR FD + E+ W++MI GY Q G EA+ +F ++ K +RP + L
Sbjct: 246 FSRCGMVEVAREFFDEMKERDEISWSAMIDGYIQEGCFMEALEIFHQMQKEKIRPRKFVL 305
Query: 336 ATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPD 395
+ LSACA LG+L +G+ I Y N ++ + + TSL+ M++KCGRI+ A EVFE++ +
Sbjct: 306 PSVLSACANLGALDQGRWIHTYAKRNSIQLDGVLGTSLVDMYAKCGRIDLAWEVFEKMSN 365
Query: 396 KDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLS 455
K+++ W+AMI G A+HG + A++LF KM + P+ + + +L+AC+H G+V GL+
Sbjct: 366 KEVSSWNAMIGGLAMHGRAEDAIDLFSKMD----INPNEITFVGVLNACAHGGLVQKGLT 421
Query: 456 FFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKH 515
F SM+ +G+EP IEHY C+VDLLGRAG A K + +P E VW LL AC KH
Sbjct: 422 IFNSMRKEYGVEPQIEHYGCIVDLLGRAGLLTEAEKVVSSIPTEPTPAVWGALLGACRKH 481
Query: 516 HNVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQ 575
NVELGE K LL L P ++G Y L++N++ AG W+E R LM +R + PG S
Sbjct: 482 GNVELGERVGKILLELEPQNSGRYTLLSNIYAKAGRWEEVGEVRKLMKERGIKTTPGTSI 541
Query: 576 VEID-GSVQVFVAGDRSHHLSVDIRKTLKELHIKLLEAGY 614
+++ G V F+ GD SH DI + L ++ +L GY
Sbjct: 542 IDLGRGEVHKFIIGDGSHPQVKDIYQMLDKVKERLQMEGY 581
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 114/412 (27%), Positives = 194/412 (47%), Gaps = 50/412 (12%)
Query: 7 NNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAF 66
NN F+ L Y M+ N +T+P VLKAC++ + +G +VH+H++K G D
Sbjct: 115 NNEPFKAIL-LYYEMMVAHFRPNKYTYPAVLKACSDAGVVAEGVQVHAHLVKHGLGGDGH 173
Query: 67 VQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWV 126
+ + I MY+ V +R++LD+ + V WN++I + R
Sbjct: 174 ILSSAIRMYASFGRLVEARRILDDKGGEV-DAVCWNAMIDGYLR---------------- 216
Query: 127 LGLELSASTFVSVVSGCSFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARS 186
F V + +G+ + I N+++S +++ G V AR
Sbjct: 217 ---------FGEVEAARELFEGMPD----------RSMISTWNAMISGFSRCGMVEVARE 257
Query: 187 IFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGN 246
FDE+ E +SW+ +I GY+ G EA + +QM++ + P V +++ CA +G
Sbjct: 258 FFDEMKERDEISWSAMIDGYIQEGCFMEALEIFHQMQKEKIRPRKFVLPSVLSACANLGA 317
Query: 247 LFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGG 306
L +H+ ++ + L LV MY KCG ++LA VF+ + K V W +MIGG
Sbjct: 318 LDQGRWIHTYAKRNSIQLDGVLGTSLVDMYAKCGRIDLAWEVFEKMSNKEVSSWNAMIGG 377
Query: 307 YAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEI-----EEYIVLN 361
A G +A++LF ++ + PNE T L+ACA G + KG I +EY
Sbjct: 378 LAMHGRAEDAIDLFSKM---DINPNEITFVGVLNACAHGGLVQKGLTIFNSMRKEY---- 430
Query: 362 GLESNRQVQTSLIHMFSKCGRINKAKEVFERVP-DKDLAVWSAMINGYAIHG 412
G+E + ++ + + G + +A++V +P + AVW A++ HG
Sbjct: 431 GVEPQIEHYGCIVDLLGRAGLLTEAEKVVSSIPTEPTPAVWGALLGACRKHG 482
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 105/220 (47%), Gaps = 16/220 (7%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI G F E L + M + + F P VL ACAN+ ++ G+ +H++ +
Sbjct: 273 MIDGYIQEGCFMEALEIFHQMQKEKIRPRKFVLPSVLSACANLGALDQGRWIHTYAKRNS 332
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISA---HSRACLNDEA 117
Q D + T L+DMY+KC + +V ++M + V SWN++I H RA ++A
Sbjct: 333 IQLDGVLGTSLVDMYAKCGRIDLAWEVFEKMSN--KEVSSWNAMIGGLAMHGRA---EDA 387
Query: 118 ILVLKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMS 173
I + +M + E+ TFV V++ C+ ++G+++ + K + +I ++
Sbjct: 388 IDLFSKMDINPNEI---TFVGVLNACAHGGLVQKGLTIFNSMRKEYGVEPQIEHYGCIVD 444
Query: 174 MYAKFGKVNEARSIFDEI-GETSIVSWTTIIGGYVNVGNV 212
+ + G + EA + I E + W ++G GNV
Sbjct: 445 LLGRAGLLTEAEKVVSSIPTEPTPAVWGALLGACRKHGNV 484
>gi|297740651|emb|CBI30833.3| unnamed protein product [Vitis vinifera]
Length = 709
Score = 350 bits (897), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 191/588 (32%), Positives = 319/588 (54%), Gaps = 10/588 (1%)
Query: 37 LKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLR 96
L+A A+ ++ GK +HS++L GF T LI+MYSKC+ + + + P
Sbjct: 44 LQASAHHKNLSKGKEIHSYMLINGFLNSPLSITSLINMYSKCNQMNFALSIFSD-PTHEI 102
Query: 97 SVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGC-SFRQGISMHCCV 155
+V ++N+IIS +E ++M G+ TF + C + +H +
Sbjct: 103 NVFAFNAIISGFITNGFPEEGFEFYQKMRNEGVIPDKFTFPCAIKACLDVLEIKKIHGLL 162
Query: 156 YKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEA 215
+K GL ++ + +++++ Y KFG + A+ F+E+ +V W ++ GY +G
Sbjct: 163 FKFGL-ELDVFIGSALVNCYLKFGLMEHAQVAFEELPIRDVVLWNAMVNGYAQIGQFEMV 221
Query: 216 FGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSM 275
+M SV P ++ A +G+L +H +K GY++ + N L+ M
Sbjct: 222 LETFRRMNDESVVPSRFTVTGVLSVFAVMGDLNNGRIIHGFAMKMGYDSGVAVSNSLIDM 281
Query: 276 YTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATL 335
Y KC +E A +F+ + EK +F W S++ + Q G + L R+L ++P+ T+
Sbjct: 282 YGKCKCIEDALEIFEMMREKDIFSWNSIVSVHEQCGDHDGTLRLLDRMLGAGIQPDLVTV 341
Query: 336 ATTLSACAELGSLSKGKEIEEYIVLNGLESNRQ------VQTSLIHMFSKCGRINKAKEV 389
T L AC+ L +L G+EI Y++++GL + + ++ ++I M++KCG + A V
Sbjct: 342 TTVLPACSHLAALMHGREIHGYMIVSGLGKDGKDIDDVLLKNAVIDMYAKCGSMRDAHLV 401
Query: 390 FERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGM 449
FER+ +KD+A W+ MI GY +HG G++AL +F +M V+ LKPD V + +LSACSH+G
Sbjct: 402 FERMSNKDVASWNIMIMGYGMHGYGNEALEMFSRMCEVQ-LKPDEVTFVGVLSACSHAGF 460
Query: 450 VDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLL 509
V G +F M+S + + P+IEHY C++D+LGRAG+ D A + MP+E VW LL
Sbjct: 461 VSQGRNFLVQMKSKYDVAPTIEHYTCVIDMLGRAGQLDEAYELALTMPIEANPVVWRALL 520
Query: 510 SACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTK 569
+AC H + L E AA+ + L P G+Y+LM+N++ + G ++E R M + + K
Sbjct: 521 AACRLHKHAVLAEVAAQRVFELEPEHCGSYVLMSNVYGAVGRYEEVLEVRHTMRQQNVRK 580
Query: 570 EPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKELHIKLLEAGYIAE 617
PG S +E+ V VFV+ DR+H + I L L +L E GY+ +
Sbjct: 581 TPGCSWIELKNGVHVFVSADRAHPEAHSIYAGLNSLTARLREHGYVPD 628
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 114/427 (26%), Positives = 206/427 (48%), Gaps = 26/427 (6%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+I NG EE Y M GV + FTFP +KAC ++ I K++H + K G
Sbjct: 110 IISGFITNGFPEEGFEFYQKMRNEGVIPDKFTFPCAIKACLDVLEI---KKIHGLLFKFG 166
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+ D F+ + L++ Y K ++ +E+P+ R VV WN++++ +++ + +
Sbjct: 167 LELDVFIGSALVNCYLKFGLMEHAQVAFEELPI--RDVVLWNAMVNGYAQIGQFEMVLET 224
Query: 121 LKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
+ M + S T V+S + G +H K+G ++ + ++NS++ MY
Sbjct: 225 FRRMNDESVVPSRFTVTGVLSVFAVMGDLNNGRIIHGFAMKMG-YDSGVAVSNSLIDMYG 283
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K + +A IF+ + E I SW +I+ + G+ + L ++M + PDLV
Sbjct: 284 KCKCIEDALEIFEMMREKDIFSWNSIVSVHEQCGDHDGTLRLLDRMLGAGIQPDLVTVTT 343
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDP------LDNLLVSMYTKCGDLELARRVFD 290
++ C+ + L +H ++ SG + L N ++ MY KCG + A VF+
Sbjct: 344 VLPACSHLAALMHGREIHGYMIVSGLGKDGKDIDDVLLKNAVIDMYAKCGSMRDAHLVFE 403
Query: 291 AVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSK 350
+ K V W MI GY GY +EA+ +F R+ + ++P+E T LSAC+ G +S+
Sbjct: 404 RMSNKDVASWNIMIMGYGMHGYGNEALEMFSRMCEVQLKPDEVTFVGVLSACSHAGFVSQ 463
Query: 351 GKEI-----EEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVP-DKDLAVWSAM 404
G+ +Y V +E T +I M + G++++A E+ +P + + VW A+
Sbjct: 464 GRNFLVQMKSKYDVAPTIEH----YTCVIDMLGRAGQLDEAYELALTMPIEANPVVWRAL 519
Query: 405 INGYAIH 411
+ +H
Sbjct: 520 LAACRLH 526
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 88/173 (50%), Gaps = 12/173 (6%)
Query: 331 NEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVF 390
N T +L A A +LSKGKEI Y+++NG ++ TSLI+M+SKC ++N A +F
Sbjct: 36 NLTTCIASLQASAHHKNLSKGKEIHSYMLINGFLNSPLSITSLINMYSKCNQMNFALSIF 95
Query: 391 ERVPDKDLAVWS--AMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSG 448
P ++ V++ A+I+G+ +G ++ + KM++ EG+ PD + + AC
Sbjct: 96 SD-PTHEINVFAFNAIISGFITNGFPEEGFEFYQKMRN-EGVIPDKFTFPCAIKACLDVL 153
Query: 449 MVDD--GLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVE 499
+ GL F FG+E + LV+ + G + A E+P+
Sbjct: 154 EIKKIHGLLF------KFGLELDVFIGSALVNCYLKFGLMEHAQVAFEELPIR 200
>gi|307136183|gb|ADN34022.1| hypothetical protein [Cucumis melo subsp. melo]
Length = 773
Score = 350 bits (897), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 202/629 (32%), Positives = 335/629 (53%), Gaps = 26/629 (4%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+IR T++G ++L ++ ML +G++ + FP VLKACA + + G+ +H ++++VG
Sbjct: 79 VIRCYTSHGLPHKSLGSFIGMLASGLYPDHNVFPSVLKACAMLMDLNLGESLHGYIIRVG 138
Query: 61 FQQDAFVQTGLIDMYSKC-------SDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACL 113
D + L++MYSK + + +VLDEM R RSV + + ++ R
Sbjct: 139 LDFDLYTGNALMNMYSKLRFLKKSGRQRLGASQVLDEMTERTRSVRTASVLVGNQGRKVS 198
Query: 114 NDEAILVLKEMWVLGLELSASTF-VSVVSGCSFRQGISMHCCVYKLGLLNNEIPLANSVM 172
+ EA ++ E A + +R+ M C L +I + M
Sbjct: 199 DIEAFNY--DVSCRSREFEAQVLEIDYKPRSEYRE---MEACN-----LGQQIKDISHSM 248
Query: 173 SMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLV 232
S V+ R IF+ + E +VSW TII G G E + +M ++ PD
Sbjct: 249 S-------VDSVRKIFEMMPEKDLVSWNTIIAGNARNGLYGETLTMVREMGGANLKPDSF 301
Query: 233 VFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAV 292
+++ A+ ++ +H ++ G + E + + L+ MY KC + + RVF +
Sbjct: 302 TLSSVLPLIAENVDISKGKEIHGCSIRQGLDAEVYVASSLIDMYAKCTRVVDSYRVFTLL 361
Query: 293 LEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGK 352
E+ W S+I G Q G E + F+++L ++P + ++ + ACA L +L GK
Sbjct: 362 TERDGISWNSIIAGCVQNGLFDEGLKFFRQMLMAKIKPKSYSFSSIMPACAHLTTLHLGK 421
Query: 353 EIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHG 412
++ YI NG + N + +SL+ M++KCG I A+++F+R+ +D+ W+AMI G A+HG
Sbjct: 422 QLHGYITRNGFDENIFIASSLVDMYAKCGNIRTARQIFDRMRLRDMVSWTAMIMGCALHG 481
Query: 413 MGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEH 472
A+ LF +M+ EG++P+ V + ++L+ACSH+G+VD+ +F SM +FGI P +EH
Sbjct: 482 HALDAIELFEQMK-TEGIEPNYVAFMAVLTACSHAGLVDEAWKYFNSMTLDFGIAPGVEH 540
Query: 473 YLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLN 532
Y + DLLGRAGR + A I MP+ VWA LLSAC H NV++ E A +L ++
Sbjct: 541 YAAVSDLLGRAGRLEEAYDFICGMPIGPTGSVWATLLSACRVHKNVDMAEKVANRILEVD 600
Query: 533 PGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSH 592
P +TG YIL+AN++++A WKEAA R + + K P S +E+ V F+AGD SH
Sbjct: 601 PKNTGAYILLANIYSAARRWKEAAKWRASLRRTGIRKTPACSWIEVRNKVYAFMAGDESH 660
Query: 593 HLSVDIRKTLKELHIKLLEAGYIAEADIV 621
IR+ ++ L + + GY+ + V
Sbjct: 661 PCYEKIREAMEVLMELMEKEGYVPDTSEV 689
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 98/489 (20%), Positives = 200/489 (40%), Gaps = 81/489 (16%)
Query: 174 MYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVV 233
+Y+ ++++ +F+ + ++W ++I Y + G +++ G M + PD V
Sbjct: 51 IYSHINLLHDSLRLFNTLHFPPALAWKSVIRCYTSHGLPHKSLGSFIGMLASGLYPDHNV 110
Query: 234 FLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARR------ 287
F +++ CA + +L L S+H +++ G + + N L++MY+K L+ + R
Sbjct: 111 FPSVLKACAMLMDLNLGESLHGYIIRVGLDFDLYTGNALMNMYSKLRFLKKSGRQRLGAS 170
Query: 288 -VFDAVLEKSVFLWTS--MIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAE 344
V D + E++ + T+ ++G + EA N S R E A+
Sbjct: 171 QVLDEMTERTRSVRTASVLVGNQGRKVSDIEAFN-----YDVSCRSREFE--------AQ 217
Query: 345 LGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAM 404
+ + K EY + +Q++ + H S ++ +++FE +P+KDL W+ +
Sbjct: 218 VLEIDY-KPRSEYREMEACNLGQQIK-DISHSMS----VDSVRKIFEMMPEKDLVSWNTI 271
Query: 405 INGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHS-----GMVDDGLSFFKS 459
I G A +G+ + L + +M LKPD+ +S+L + + G G S +
Sbjct: 272 IAGNARNGLYGETLTMVREMGGA-NLKPDSFTLSSVLPLIAENVDISKGKEIHGCSIRQG 330
Query: 460 MQSNFGIEPS-----------IEHYLCLVDLLGRA--------------GRFDLALKTIH 494
+ + + S ++ Y L R G FD LK
Sbjct: 331 LDAEVYVASSLIDMYAKCTRVVDSYRVFTLLTERDGISWNSIIAGCVQNGLFDEGLKFFR 390
Query: 495 EM---PVEVQAQVWAPLLSACMKHHNVELGE----YAAKNLLTLNPGSTGNYILMANLFT 547
+M ++ ++ ++ ++ AC + LG+ Y +N G N + ++L
Sbjct: 391 QMLMAKIKPKSYSFSSIMPACAHLTTLHLGKQLHGYITRN------GFDENIFIASSLVD 444
Query: 548 SAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKELHI 607
TAR + D RL W+ + G H ++D + +++
Sbjct: 445 MYAKCGNIRTARQIFDRMRLRDMVSWT---------AMIMGCALHGHALDAIELFEQMKT 495
Query: 608 KLLEAGYIA 616
+ +E Y+A
Sbjct: 496 EGIEPNYVA 504
>gi|359488035|ref|XP_003633690.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g14820-like [Vitis vinifera]
Length = 731
Score = 350 bits (897), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 200/618 (32%), Positives = 329/618 (53%), Gaps = 60/618 (9%)
Query: 42 NINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSW 101
+++++ K++H+H++K F + L++ P L W
Sbjct: 52 DLSTLEQTKQIHAHIIKTHFHHALQIP-------------------LNDFPSGLSPSAQW 92
Query: 102 NSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGC---SFRQ-GISMHCCVYK 157
N +I+++++ A+ V ++ + E+ SV+ C S+ Q G +H V K
Sbjct: 93 NFVITSYTKRNQPRNALNVYAQLRKMDFEVDNFMAPSVLKACGQVSWTQLGKEIHGFVLK 152
Query: 158 LGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFG 217
GL + ++ + N++M MY + V AR +FD++ E +VSW+T+I + A
Sbjct: 153 KGL-DRDVFVGNALMLMYGECACVEYARLVFDKMMERDVVSWSTMIRSLSRNKEFDMALE 211
Query: 218 LCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNED---PLDNLLVS 274
L +M M V P V ++++ A N+ + +MH+ ++++ NNE P L+
Sbjct: 212 LIREMNFMQVRPSEVAMVSMVNLFADTANMRMGKAMHAYVIRNS-NNEHMGVPTTTALLD 270
Query: 275 MYTKCGDLELARRVFDAVLEKSVFLWTSMIGG---------------------------- 306
MY KCG L LAR++F+ + +K+V WT+MI G
Sbjct: 271 MYAKCGHLGLARQLFNGLTQKTVVSWTAMIAGCIRSNRLEEARALFDSTQNRDVMIWTAM 330
Query: 307 ---YAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGL 363
YAQ +A NLF ++ + VRP + T+ + LS CA G+L GK + YI +
Sbjct: 331 LSAYAQANCIDQAFNLFDQMRTSGVRPTKVTIVSLLSLCAVAGALDLGKWVHSYIDKERV 390
Query: 364 ESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYK 423
E + + T+L+ M++KCG IN A +F +D+ +W+A+I G+A+HG G++AL++F +
Sbjct: 391 EVDCILNTALVDMYAKCGDINAAGRLFIEAISRDICMWNAIITGFAMHGYGEEALDIFAE 450
Query: 424 MQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRA 483
M+ +G+KP+ + + +L ACSH+G+V +G F+ M FG+ P IEHY C+VDLLGRA
Sbjct: 451 MER-QGVKPNDITFIGLLHACSHAGLVTEGKKLFEKMVHTFGLVPQIEHYGCMVDLLGRA 509
Query: 484 GRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMA 543
G D A + I MP++ VW L++AC H N +LGE AA LL + P + G +LM+
Sbjct: 510 GLLDEAHEMIKSMPIKPNTIVWGALVAACRLHKNPQLGELAATQLLEIEPENCGYNVLMS 569
Query: 544 NLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLK 603
N++ +A W +AA R M + KEPG S +E++G+V F+ GD+SH I + L
Sbjct: 570 NIYAAANRWSDAAGVRKTMKTVGMKKEPGHSVIEVNGTVHEFLMGDQSHPQIRRINEMLA 629
Query: 604 ELHIKLLEAGYIAEADIV 621
E+ KL EAGY+ + V
Sbjct: 630 EMRRKLNEAGYVPDTSTV 647
Score = 201 bits (510), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 131/451 (29%), Positives = 224/451 (49%), Gaps = 44/451 (9%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+I + T L+ Y+ + + ++F P VLKAC ++ GK +H VLK G
Sbjct: 95 VITSYTKRNQPRNALNVYAQLRKMDFEVDNFMAPSVLKACGQVSWTQLGKEIHGFVLKKG 154
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+D FV L+ MY +C+ +R V D+M R VVSW+++I + SR D A+ +
Sbjct: 155 LDRDVFVGNALMLMYGECACVEYARLVFDKM--MERDVVSWSTMIRSLSRNKEFDMALEL 212
Query: 121 LKEMWVLGLELSASTFVSVVS----GCSFRQGISMHCCVYKLGLLNNE---IPLANSVMS 173
++EM + + S VS+V+ + R G +MH V + NNE +P +++
Sbjct: 213 IREMNFMQVRPSEVAMVSMVNLFADTANMRMGKAMHAYVIRNS--NNEHMGVPTTTALLD 270
Query: 174 MYAKFGKVNEARSIFDEIGETSIVSWTTIIGG---------------------------- 205
MYAK G + AR +F+ + + ++VSWT +I G
Sbjct: 271 MYAKCGHLGLARQLFNGLTQKTVVSWTAMIAGCIRSNRLEEARALFDSTQNRDVMIWTAM 330
Query: 206 ---YVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGY 262
Y +++AF L +QMR V P V ++L+ CA G L L +HS + K
Sbjct: 331 LSAYAQANCIDQAFNLFDQMRTSGVRPTKVTIVSLLSLCAVAGALDLGKWVHSYIDKERV 390
Query: 263 NNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKR 322
+ L+ LV MY KCGD+ A R+F + + + +W ++I G+A GY EA+++F
Sbjct: 391 EVDCILNTALVDMYAKCGDINAAGRLFIEAISRDICMWNAIITGFAMHGYGEEALDIFAE 450
Query: 323 LLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLN-GLESNRQVQTSLIHMFSKCG 381
+ + V+PN+ T L AC+ G +++GK++ E +V GL + ++ + + G
Sbjct: 451 MERQGVKPNDITFIGLLHACSHAGLVTEGKKLFEKMVHTFGLVPQIEHYGCMVDLLGRAG 510
Query: 382 RINKAKEVFERVPDK-DLAVWSAMINGYAIH 411
+++A E+ + +P K + VW A++ +H
Sbjct: 511 LLDEAHEMIKSMPIKPNTIVWGALVAACRLH 541
>gi|357143522|ref|XP_003572950.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Brachypodium distachyon]
Length = 874
Score = 350 bits (897), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 201/618 (32%), Positives = 346/618 (55%), Gaps = 20/618 (3%)
Query: 13 ETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLI 72
+ ++ + M GV N FTF VL A A+ ++ G+RVH+ +K G + FV LI
Sbjct: 184 DVMALFFRMRAEGVWPNPFTFTSVLSAVASQGAVDLGRRVHAQSVKFGCRSTVFVCNSLI 243
Query: 73 DMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLND---EAILVLKEMWVLGL 129
+MYSKC ++ V +M R +VSWN++++ LN+ EA+ + +
Sbjct: 244 NMYSKCGLVEEAKAVFRQMETR--DMVSWNTLMAG---LLLNEHQLEALQLFHDSRASMA 298
Query: 130 ELSASTFVSVVSGCSFRQGISM----HCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEAR 185
+LS ST+ +V+ C+ + +++ H CV K G +++ + ++M Y+K G++++A
Sbjct: 299 KLSQSTYSTVIKLCANLKQLALARQLHSCVLKHGF-HSDGNVMTAIMDAYSKCGELDDAF 357
Query: 186 SIFDEI-GETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQV 244
+IF + G ++VSWT +IGG + ++ A L ++MR +V P+ + ++ +
Sbjct: 358 NIFLLMPGSQNVVSWTAMIGGCIQNADIPLAAALFSRMREDNVKPNEFTYSTVLTASIPI 417
Query: 245 GNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMI 304
L +H+ ++K+ Y + + L++ Y+K G+ E A +F + K V W++M+
Sbjct: 418 ----LLPQIHAQIIKTNYQHAPSVGTALLASYSKLGNTEEALSIFKMIDHKDVVAWSAML 473
Query: 305 GGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAE-LGSLSKGKEIEEYIVLNGL 363
Y+Q G A N+F ++ ++PNE T+++ + ACA + +G++ +
Sbjct: 474 SCYSQAGDCDGATNVFIKMSMQGMKPNEFTISSAIDACASPTAGIDQGRQFHAISIKYRY 533
Query: 364 ESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYK 423
+ V ++L+ M+++ G I+ A+ VFER D+DL W++MI+GYA HG +AL+ F +
Sbjct: 534 QDAICVGSALVTMYARKGSIDSARIVFERQTDRDLVSWNSMISGYAQHGYSKEALDTFRQ 593
Query: 424 MQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRA 483
M+ V G++ D + +++ C+H+G+V +G +F SM + I P++EHY C+VDL RA
Sbjct: 594 METV-GIEMDGATFLAVIVGCTHAGLVKEGQQYFDSMVMDHNISPTMEHYSCMVDLYSRA 652
Query: 484 GRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMA 543
G+ D + I MP A VW LL AC H NVELG+ AA+ LL L P + Y+L++
Sbjct: 653 GKLDETMNLIEGMPFPAGAMVWRTLLGACRVHKNVELGKLAAQKLLLLEPDDSATYVLLS 712
Query: 544 NLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLK 603
N++ +AG WKE R LMD +++ KE G S ++I V F+A D+SH LS I LK
Sbjct: 713 NIYAAAGRWKERDEVRKLMDSKKVKKEAGCSWIQIKNKVHSFIACDKSHPLSEQIYAKLK 772
Query: 604 ELHIKLLEAGYIAEADIV 621
+ +L + GY +V
Sbjct: 773 AMTTRLKQEGYCPNTSVV 790
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 143/489 (29%), Positives = 246/489 (50%), Gaps = 21/489 (4%)
Query: 36 VLKACANINSIWDGKRVHSHVLKVGFQQ-DAFVQTGLIDMYSKCSDFVSSRKVLDEMPVR 94
VLK C I G+++H +K GF + + V T L+DMY KC R V + MP
Sbjct: 105 VLKVCGLIPDRVSGEQLHCLCVKCGFDRAEVGVGTALVDMYMKCGGVEDGRVVFEGMPK- 163
Query: 95 LRSVVSWNSIISAH--SRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCSFRQGISM- 151
R+VV+W S+++ + RAC + A+ M G+ + TF SV+S + + + +
Sbjct: 164 -RNVVTWTSLLTGYVQGRACSDVMALFF--RMRAEGVWPNPFTFTSVLSAVASQGAVDLG 220
Query: 152 ---HCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVN 208
H K G + + + NS+++MY+K G V EA+++F ++ +VSW T++ G +
Sbjct: 221 RRVHAQSVKFG-CRSTVFVCNSLINMYSKCGLVEEAKAVFRQMETRDMVSWNTLMAGLLL 279
Query: 209 VGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPL 268
+ EA L + R + +I CA + L LA +HS +LK G++++ +
Sbjct: 280 NEHQLEALQLFHDSRASMAKLSQSTYSTVIKLCANLKQLALARQLHSCVLKHGFHSDGNV 339
Query: 269 DNLLVSMYTKCGDLELARRVFDAVL-EKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTS 327
++ Y+KCG+L+ A +F + ++V WT+MIGG Q A LF R+ + +
Sbjct: 340 MTAIMDAYSKCGELDDAFNIFLLMPGSQNVVSWTAMIGGCIQNADIPLAAALFSRMREDN 399
Query: 328 VRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAK 387
V+PNE T +T L+A + +I I+ + V T+L+ +SK G +A
Sbjct: 400 VKPNEFTYSTVLTASIPI----LLPQIHAQIIKTNYQHAPSVGTALLASYSKLGNTEEAL 455
Query: 388 EVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSAC-SH 446
+F+ + KD+ WSAM++ Y+ G D A N+F KM ++G+KP+ +S + AC S
Sbjct: 456 SIFKMIDHKDVVAWSAMLSCYSQAGDCDGATNVFIKMS-MQGMKPNEFTISSAIDACASP 514
Query: 447 SGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWA 506
+ +D G F ++ + + +I LV + R G D A + + E + W
Sbjct: 515 TAGIDQGRQ-FHAISIKYRYQDAICVGSALVTMYARKGSIDSA-RIVFERQTDRDLVSWN 572
Query: 507 PLLSACMKH 515
++S +H
Sbjct: 573 SMISGYAQH 581
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/211 (22%), Positives = 106/211 (50%), Gaps = 8/211 (3%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINS-IWDGKRVHSHVLKV 59
M+ + G + + + M G+ N FT + ACA+ + I G++ H+ +K
Sbjct: 472 MLSCYSQAGDCDGATNVFIKMSMQGMKPNEFTISSAIDACASPTAGIDQGRQFHAISIKY 531
Query: 60 GFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAIL 119
+Q V + L+ MY++ S+R V + R +VSWNS+IS +++ + EA+
Sbjct: 532 RYQDAICVGSALVTMYARKGSIDSARIVFERQTD--RDLVSWNSMISGYAQHGYSKEALD 589
Query: 120 VLKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGLLNNEIPLA----NSVMSMY 175
++M +G+E+ +TF++V+ GC+ + + ++++ I + ++ +Y
Sbjct: 590 TFRQMETVGIEMDGATFLAVIVGCTHAGLVKEGQQYFDSMVMDHNISPTMEHYSCMVDLY 649
Query: 176 AKFGKVNEARSIFDEIG-ETSIVSWTTIIGG 205
++ GK++E ++ + + + W T++G
Sbjct: 650 SRAGKLDETMNLIEGMPFPAGAMVWRTLLGA 680
>gi|358343602|ref|XP_003635889.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|358344096|ref|XP_003636129.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355501824|gb|AES83027.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355502064|gb|AES83267.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 662
Score = 350 bits (897), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 205/595 (34%), Positives = 325/595 (54%), Gaps = 13/595 (2%)
Query: 33 FPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMP 92
+ ++ C N S+ K +H+H+LK G +F LID Y KCS +RK+ DEMP
Sbjct: 4 YTSLIAQCTNKKSLTTLKSLHTHILKSG-SLFSFFGHKLIDGYIKCSVITEARKLFDEMP 62
Query: 93 VRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCS----FRQG 148
R +V+WNS+IS+H EAI + M G+ A TF ++ S R+G
Sbjct: 63 NR--HIVTWNSMISSHVSRGKTKEAIELYSNMLFEGVLPDAYTFSAIFKAFSEMGVSREG 120
Query: 149 ISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVN 208
H LG ++ +A ++ MYAKFGK+ +AR +FD + + +V +T +I GY
Sbjct: 121 QKAHGLAVVLGFEVSDGFVATGIVDMYAKFGKMKDARFVFDRVLDKDVVLFTALIVGYNQ 180
Query: 209 VGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPL 268
G EA + M + P+ ++++ C +G+L +H L++K G +
Sbjct: 181 HGLDGEALEVFEDMVGSRIKPNEYTLASVLVSCGNLGDLVNGKLIHGLVVKYGLESVVAS 240
Query: 269 DNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSV 328
L++MY+KC +E + +VF+++ S WTS I G Q G A+++F+ +++ S+
Sbjct: 241 QTSLLTMYSKCNMVEDSIKVFNSLAYASHVTWTSFIVGLVQNGREEVALSMFREMMRCSI 300
Query: 329 RPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKE 388
PN TL++ L AC+ L L G++I V G++ N+ V +LIH++ KCG + KA+
Sbjct: 301 SPNHFTLSSILHACSSLAMLEAGEQIHAVTVKLGVDGNKFVDAALIHLYGKCGNVEKARS 360
Query: 389 VFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSG 448
VF+ + + D+ + MI YA +G G +AL LF +++ + GL+P+ V + SIL AC+++G
Sbjct: 361 VFDSLTELDIVSINTMIYAYAQNGFGHEALELFERLKKL-GLEPNVVTFISILLACNNAG 419
Query: 449 MVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHE--MPVEVQAQVWA 506
+V++G F +++N IE + +HY C++DLLGRA RF+ A I E P +Q W
Sbjct: 420 LVEEGCQIFSLIRNNHSIELTRDHYTCMIDLLGRAKRFEEATMLIEEGKNPDVIQ---WR 476
Query: 507 PLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRR 566
LL+AC H VE+ E K +L P G +IL+ N++ SAG W + D R
Sbjct: 477 TLLNACKIHGEVEMAEKFMKKMLDQAPRDGGTHILLTNIYASAGKWDNVIEMKSAGRDLR 536
Query: 567 LTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKELHIKLLEAGYIAEADIV 621
L K P S V+ID V F+AGD SH + +I + L EL K++ GY + V
Sbjct: 537 LKKTPAMSWVDIDREVHTFMAGDLSHPRAHEISEMLHELIEKVITLGYNPDTKFV 591
Score = 196 bits (497), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 126/430 (29%), Positives = 219/430 (50%), Gaps = 9/430 (2%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI + + G +E + YS+ML GV +++TF + KA + + +G++ H + +G
Sbjct: 72 MISSHVSRGKTKEAIELYSNMLFEGVLPDAYTFSAIFKAFSEMGVSREGQKAHGLAVVLG 131
Query: 61 FQ-QDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAIL 119
F+ D FV TG++DMY+K +R V D V + VV + ++I +++ L+ EA+
Sbjct: 132 FEVSDGFVATGIVDMYAKFGKMKDARFVFDR--VLDKDVVLFTALIVGYNQHGLDGEALE 189
Query: 120 VLKEMWVLGLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMY 175
V ++M ++ + T SV+ C G +H V K G L + + S+++MY
Sbjct: 190 VFEDMVGSRIKPNEYTLASVLVSCGNLGDLVNGKLIHGLVVKYG-LESVVASQTSLLTMY 248
Query: 176 AKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFL 235
+K V ++ +F+ + S V+WT+ I G V G A + +M R S++P+
Sbjct: 249 SKCNMVEDSIKVFNSLAYASHVTWTSFIVGLVQNGREEVALSMFREMMRCSISPNHFTLS 308
Query: 236 NLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEK 295
+++ C+ + L +H++ +K G + +D L+ +Y KCG++E AR VFD++ E
Sbjct: 309 SILHACSSLAMLEAGEQIHAVTVKLGVDGNKFVDAALIHLYGKCGNVEKARSVFDSLTEL 368
Query: 296 SVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIE 355
+ +MI YAQ G+ EA+ LF+RL K + PN T + L AC G + +G +I
Sbjct: 369 DIVSINTMIYAYAQNGFGHEALELFERLKKLGLEPNVVTFISILLACNNAGLVEEGCQIF 428
Query: 356 EYIVLN-GLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMG 414
I N +E R T +I + + R +A + E + D+ W ++N IHG
Sbjct: 429 SLIRNNHSIELTRDHYTCMIDLLGRAKRFEEATMLIEEGKNPDVIQWRTLLNACKIHGEV 488
Query: 415 DQALNLFYKM 424
+ A KM
Sbjct: 489 EMAEKFMKKM 498
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 93/373 (24%), Positives = 175/373 (46%), Gaps = 18/373 (4%)
Query: 13 ETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLI 72
E L + M+ + + N +T VL +C N+ + +GK +H V+K G + QT L+
Sbjct: 186 EALEVFEDMVGSRIKPNEYTLASVLVSCGNLGDLVNGKLIHGLVVKYGLESVVASQTSLL 245
Query: 73 DMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELS 132
MYSKC+ S KV + + S V+W S I + + A+ + +EM + +
Sbjct: 246 TMYSKCNMVEDSIKVFNSLA--YASHVTWTSFIVGLVQNGREEVALSMFREMMRCSISPN 303
Query: 133 ASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIF 188
T S++ CS G +H KLG+ N+ A +++ +Y K G V +ARS+F
Sbjct: 304 HFTLSSILHACSSLAMLEAGEQIHAVTVKLGVDGNKFVDA-ALIHLYGKCGNVEKARSVF 362
Query: 189 DEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLF 248
D + E IVS T+I Y G +EA L +++++ + P++V F++++L C G +
Sbjct: 363 DSLTELDIVSINTMIYAYAQNGFGHEALELFERLKKLGLEPNVVTFISILLACNNAGLVE 422
Query: 249 LALSMHSLLLKSGYNNEDPLDNL--LVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGG 306
+ S L+++ ++ E D+ ++ + + E A + + V W +++
Sbjct: 423 EGCQIFS-LIRNNHSIELTRDHYTCMIDLLGRAKRFEEATMLIEEGKNPDVIQWRTLLNA 481
Query: 307 YAQLGYPSEAVNLFKRLLKTSVRPNEA-TLATTLSACA-------ELGSLSKGKEIEEYI 358
G A K++L + R L T + A A E+ S + +++
Sbjct: 482 CKIHGEVEMAEKFMKKMLDQAPRDGGTHILLTNIYASAGKWDNVIEMKSAGRDLRLKKTP 541
Query: 359 VLNGLESNRQVQT 371
++ ++ +R+V T
Sbjct: 542 AMSWVDIDREVHT 554
>gi|297829702|ref|XP_002882733.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297328573|gb|EFH58992.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 620
Score = 349 bits (896), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 190/522 (36%), Positives = 294/522 (56%), Gaps = 16/522 (3%)
Query: 100 SWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCSFRQ----GISMHCCV 155
SWN + + L E+I + + M G A +F ++ C+ G +HC V
Sbjct: 17 SWNVRLRELAYQSLFTESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHV 76
Query: 156 YKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSI--VSWTTIIGGYVNVGNVN 213
+ G E + +++SMY K G V +AR +F+E +S V + +I GY V+
Sbjct: 77 IRGGC-EAEPFVLTALISMYCKCGLVEDARKVFEENPHSSQLGVCYNALISGYTANSKVS 135
Query: 214 EAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLV 273
+A + +M+ V+ D V L L+ C L+L S+H +K G +E + N +
Sbjct: 136 DAAFMFRRMKETGVSVDSVTILGLVPLCTVPEYLWLGRSLHGECVKGGTYSEVAVLNSFI 195
Query: 274 SMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEA 333
+MY KCG +E RR+FD + K + W ++I GY+Q G + + LF+++ + V P+
Sbjct: 196 TMYMKCGSVESGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELFEQMKSSGVCPDPF 255
Query: 334 TLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERV 393
TL + LS+CA LG+ G+E+ E + NG N + +LI M+++CG + KA+ VF+ +
Sbjct: 256 TLVSVLSSCAHLGAKKIGQEVGELVEANGFAPNVFLSNALISMYARCGNLAKARAVFDIM 315
Query: 394 PDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDG 453
P K L W+AMI Y +HGMG+ L LF M G++PD V+ +LSACSHSG+ D G
Sbjct: 316 PVKSLVSWTAMIGCYGMHGMGETGLTLFDDMIK-RGIRPDGAVFVMVLSACSHSGLTDKG 374
Query: 454 LSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACM 513
L F++M+ + +EP EHY CLVDLLGRAGR D A++ I MPVE VW LL AC
Sbjct: 375 LELFRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIDSMPVEPDGAVWGALLGACK 434
Query: 514 KHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSA----GMWKEAATARGLMDDRRLTK 569
H NV++ E A ++ P + G Y+LM+N+++ + G+W+ R +M +R K
Sbjct: 435 IHKNVDMAELAFAKVIEFEPMNIGYYVLMSNIYSDSKNQEGIWR----IRVMMRERAFRK 490
Query: 570 EPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKELHIKLLE 611
+PG+S VE G V +F+AGDRSH + ++ + L EL ++E
Sbjct: 491 KPGYSYVEHKGKVHLFLAGDRSHEQTEEVHRMLDELETSVME 532
Score = 230 bits (586), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 136/430 (31%), Positives = 225/430 (52%), Gaps = 15/430 (3%)
Query: 11 FEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTG 70
F E++S Y SML++G ++F+FP +LK+CA+++ G+++H HV++ G + + FV T
Sbjct: 31 FTESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVIRGGCEAEPFVLTA 90
Query: 71 LIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLE 130
LI MY KC +RKV +E P + V +N++IS ++ +A + + M G+
Sbjct: 91 LISMYCKCGLVEDARKVFEENPHSSQLGVCYNALISGYTANSKVSDAAFMFRRMKETGVS 150
Query: 131 LSASTFVSVVSGCSFRQ----GISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARS 186
+ + T + +V C+ + G S+H K G +E+ + NS ++MY K G V R
Sbjct: 151 VDSVTILGLVPLCTVPEYLWLGRSLHGECVKGGTY-SEVAVLNSFITMYMKCGSVESGRR 209
Query: 187 IFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGN 246
+FDE+ +++W +I GY G + L QM+ V PD ++++ CA +G
Sbjct: 210 LFDEMPVKGLITWNAVISGYSQNGLAYDVLELFEQMKSSGVCPDPFTLVSVLSSCAHLGA 269
Query: 247 LFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGG 306
+ + L+ +G+ L N L+SMY +CG+L AR VFD + KS+ WT+MIG
Sbjct: 270 KKIGQEVGELVEANGFAPNVFLSNALISMYARCGNLAKARAVFDIMPVKSLVSWTAMIGC 329
Query: 307 YAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEI-----EEYIVLN 361
Y G + LF ++K +RP+ A LSAC+ G KG E+ EY
Sbjct: 330 YGMHGMGETGLTLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLELFRAMKREY---- 385
Query: 362 GLESNRQVQTSLIHMFSKCGRINKAKEVFERVP-DKDLAVWSAMINGYAIHGMGDQALNL 420
LE + + L+ + + GR+++A E + +P + D AVW A++ IH D A
Sbjct: 386 KLEPGPEHYSCLVDLLGRAGRLDEAMEFIDSMPVEPDGAVWGALLGACKIHKNVDMAELA 445
Query: 421 FYKMQHVEGL 430
F K+ E +
Sbjct: 446 FAKVIEFEPM 455
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 87/312 (27%), Positives = 152/312 (48%), Gaps = 9/312 (2%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+I T N + + M +TGV +S T ++ C +W G+ +H +K G
Sbjct: 124 LISGYTANSKVSDAAFMFRRMKETGVSVDSVTILGLVPLCTVPEYLWLGRSLHGECVKGG 183
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+ V I MY KC S R++ DEMPV + +++WN++IS +S+ L + + +
Sbjct: 184 TYSEVAVLNSFITMYMKCGSVESGRRLFDEMPV--KGLITWNAVISGYSQNGLAYDVLEL 241
Query: 121 LKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGLLNNEIP---LANSVMSMYAK 177
++M G+ T VSV+S C+ + V +L N P L+N+++SMYA+
Sbjct: 242 FEQMKSSGVCPDPFTLVSVLSSCAHLGAKKIGQEVGELVEANGFAPNVFLSNALISMYAR 301
Query: 178 FGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNL 237
G + +AR++FD + S+VSWT +IG Y G L + M + + PD VF+ +
Sbjct: 302 CGNLAKARAVFDIMPVKSLVSWTAMIGCYGMHGMGETGLTLFDDMIKRGIRPDGAVFVMV 361
Query: 238 ILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNL--LVSMYTKCGDLELARRVFDAV-LE 294
+ C+ G L + +K Y E ++ LV + + G L+ A D++ +E
Sbjct: 362 LSACSHSGLTDKGLELFR-AMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIDSMPVE 420
Query: 295 KSVFLWTSMIGG 306
+W +++G
Sbjct: 421 PDGAVWGALLGA 432
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 102/220 (46%), Gaps = 7/220 (3%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+I + NG + L + M +GV + FT VL +CA++ + G+ V V G
Sbjct: 225 VISGYSQNGLAYDVLELFEQMKSSGVCPDPFTLVSVLSSCAHLGAKKIGQEVGELVEANG 284
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F + F+ LI MY++C + +R V D MPV +S+VSW ++I + + + + +
Sbjct: 285 FAPNVFLSNALISMYARCGNLAKARAVFDIMPV--KSLVSWTAMIGCYGMHGMGETGLTL 342
Query: 121 LKEMWVLGLELSASTFVSVVSGCSFR----QGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
+M G+ + FV V+S CS +G+ + + + L + ++ +
Sbjct: 343 FDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLELFRAMKREYKLEPGPEHYSCLVDLLG 402
Query: 177 KFGKVNEARSIFDEIG-ETSIVSWTTIIGGYVNVGNVNEA 215
+ G+++EA D + E W ++G NV+ A
Sbjct: 403 RAGRLDEAMEFIDSMPVEPDGAVWGALLGACKIHKNVDMA 442
>gi|359495515|ref|XP_002265720.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g25060, mitochondrial-like [Vitis vinifera]
Length = 678
Score = 349 bits (896), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 198/575 (34%), Positives = 317/575 (55%), Gaps = 9/575 (1%)
Query: 51 RVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSR 110
++H+ ++ G LI Y++ S+R+V D+ P V +WN++I A+SR
Sbjct: 25 KIHALMILTGIFGHGNSNAKLIQSYARLGHIESARQVFDKSP--QCGVDAWNAMIIAYSR 82
Query: 111 ACLNDEAILVLKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIP 166
EA+ + M G+ +ST+ V+ C+ R G G +++
Sbjct: 83 RGAMFEALSLYHRMASEGVRPDSSTYTVVLKACTRSLDLRSGEETWRQAVDQGY-GDDVF 141
Query: 167 LANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMS 226
+ +V+++YAK GK++EA +FD++G +V WTT+I G G EA + QM +
Sbjct: 142 VGAAVLNLYAKCGKMDEAMRVFDKMGRRDLVCWTTMITGLAQNGQAREAVDIYRQMHKKR 201
Query: 227 VTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELAR 286
V D VV L LI C +G+ + LS+H +++ + + LV MY K G LELA
Sbjct: 202 VEGDGVVMLGLIQACTTLGHSKMGLSIHGYMIRKDIIMDVIVQTSLVDMYAKNGHLELAS 261
Query: 287 RVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELG 346
VF +L K+V W+++I G+AQ G+ A+ L + +P+ +L + L AC+++G
Sbjct: 262 CVFRRMLYKNVISWSALISGFAQNGFAGNALQLVVDMQSFGYKPDSVSLVSVLLACSQVG 321
Query: 347 SLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMIN 406
L GK + YIV L + T++I M+SKCG ++ A+ VF+++ +D W+A+I
Sbjct: 322 FLKLGKSVHGYIVRR-LHFDCVSSTAVIDMYSKCGSLSFARTVFDQISFRDSISWNAIIA 380
Query: 407 GYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGI 466
Y IHG G++AL+LF +M+ +KPD + S+LSA SHSG+V+ G +F M + + I
Sbjct: 381 SYGIHGSGEEALSLFLQMRETN-VKPDHATFASLLSAFSHSGLVEKGRYWFSIMVNEYKI 439
Query: 467 EPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAK 526
+PS +HY C+VDLL RAGR + A + I M E +W LLS C+ H +GE AAK
Sbjct: 440 QPSEKHYACMVDLLSRAGRVEEAQELIESMITEPGIAIWVALLSGCLNHGKFLIGEMAAK 499
Query: 527 NLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFV 586
+L LNP G Y L++N F +A W E A R +M + K PG+S +E++G + F+
Sbjct: 500 KVLELNPDDPGIYSLVSNFFATARRWDEVAEVRKIMKKTGMKKVPGYSVMEVNGKLHAFL 559
Query: 587 AGDRSHHLSVDIRKTLKELHIKLLEAGYIAEADIV 621
D+SHH +I + L +L ++ GY+ + + V
Sbjct: 560 MEDKSHHQYEEIMQVLGKLDYEMKAMGYVPKTEFV 594
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 114/422 (27%), Positives = 217/422 (51%), Gaps = 18/422 (4%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI + G+ E LS Y M GV +S T+ +VLKAC + G+ + G
Sbjct: 76 MIIAYSRRGAMFEALSLYHRMASEGVRPDSSTYTVVLKACTRSLDLRSGEETWRQAVDQG 135
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+ D FV ++++Y+KC + +V D+M R +V W ++I+ ++ EA+ +
Sbjct: 136 YGDDVFVGAAVLNLYAKCGKMDEAMRVFDKMG--RRDLVCWTTMITGLAQNGQAREAVDI 193
Query: 121 LKEMWVLGLELSASTFVSVVSGCSF----RQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
++M +E + ++ C+ + G+S+H + + ++ + I + S++ MYA
Sbjct: 194 YRQMHKKRVEGDGVVMLGLIQACTTLGHSKMGLSIHGYMIRKDIIMDVI-VQTSLVDMYA 252
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K G + A +F + +++SW+ +I G+ G A L M+ PD V ++
Sbjct: 253 KNGHLELASCVFRRMLYKNVISWSALISGFAQNGFAGNALQLVVDMQSFGYKPDSVSLVS 312
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
++L C+QVG L L S+H +++ + + ++ MY+KCG L AR VFD + +
Sbjct: 313 VLLACSQVGFLKLGKSVHGYIVRR-LHFDCVSSTAVIDMYSKCGSLSFARTVFDQISFRD 371
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKE--- 353
W ++I Y G EA++LF ++ +T+V+P+ AT A+ LSA + G + KG+
Sbjct: 372 SISWNAIIASYGIHGSGEEALSLFLQMRETNVKPDHATFASLLSAFSHSGLVEKGRYWFS 431
Query: 354 --IEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFER-VPDKDLAVWSAMINGYAI 410
+ EY ++ + + ++ + S+ GR+ +A+E+ E + + +A+W A+++G
Sbjct: 432 IMVNEY----KIQPSEKHYACMVDLLSRAGRVEEAQELIESMITEPGIAIWVALLSGCLN 487
Query: 411 HG 412
HG
Sbjct: 488 HG 489
>gi|297832866|ref|XP_002884315.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330155|gb|EFH60574.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 861
Score = 349 bits (896), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 192/616 (31%), Positives = 326/616 (52%), Gaps = 28/616 (4%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+I N L + M + + + VL++CA ++ + G ++H+H LK
Sbjct: 210 IIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHALKSD 269
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F D V+T +DMY+KC + ++ + D+ R S+N++I+ +S+ +A+L+
Sbjct: 270 FAADGIVRTATLDMYAKCDNMQDAQILFDKSENLNRQ--SYNAMITGYSQEEHGFKALLL 327
Query: 121 LKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGL---LNNEIPLANSVMSMYAK 177
+ GL + V C+ +G+S +Y L + L+ ++ +AN+ + MY K
Sbjct: 328 FHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYDLAIKSSLSLDVCVANAAIDMYGK 387
Query: 178 FGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNL 237
+ EA +FDE+ VSW II + G E L M R + PD F ++
Sbjct: 388 CQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSV 447
Query: 238 ILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS- 296
+ C G+L + +HS ++KSG + + L+ MY+KCG +E A ++ +++
Sbjct: 448 LKACTG-GSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRTN 506
Query: 297 -------------------VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLAT 337
W S+I GY +A LF R+++ + P++ T AT
Sbjct: 507 VSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYAT 566
Query: 338 TLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKD 397
L CA L S GK+I ++ L+S+ + ++L+ M+SKCG ++ ++ +FE+ +D
Sbjct: 567 VLDTCANLASAGLGKQIHAQVIKKELQSDVYISSTLVDMYSKCGDLHDSRLMFEKSLRRD 626
Query: 398 LAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFF 457
W+AMI GYA HG G++A+ LF +M +E +KP+ V + SIL AC+H G++D GL +F
Sbjct: 627 FVTWNAMICGYAHHGKGEEAIQLFERMI-LENIKPNHVTFISILRACAHMGLIDKGLEYF 685
Query: 458 KSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKH-H 516
M+ ++G++P + HY +VD+LG++G+ AL+ I EMP E +W LL C H +
Sbjct: 686 YMMKRDYGLDPQLPHYSNMVDILGKSGKVKRALELIREMPFEADDVIWRTLLGVCTIHRN 745
Query: 517 NVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQV 576
NVE+ E A LL L+P + Y L++N++ AGMW++ + R M +L KEPG S V
Sbjct: 746 NVEVAEEATAALLRLDPQDSSAYTLLSNVYADAGMWEKVSDLRRNMRGFKLKKEPGCSWV 805
Query: 577 EIDGSVQVFVAGDRSH 592
E+ + VF+ GD++H
Sbjct: 806 ELKDELHVFLVGDKAH 821
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 132/470 (28%), Positives = 227/470 (48%), Gaps = 29/470 (6%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
M+ NG +++ + M + G + TF ++LK C+ + G ++H V++VG
Sbjct: 109 MLSGYLQNGETLKSIEVFVDMGRAGTEFDGRTFAIILKVCSCLEDTSLGMQIHGVVVRVG 168
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
D + L+DMY+K FV S +V +P ++ VSW++II+ + L A+
Sbjct: 169 CDTDVVAASALLDMYAKGKRFVESLRVFQGIPE--KNSVSWSAIIAGCVQNNLLSLALKF 226
Query: 121 LKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
KEM + +S S + SV+ C+ R G +H K + I + + + MYA
Sbjct: 227 FKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHALKSDFAADGI-VRTATLDMYA 285
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K + +A+ +FD+ + S+ +I GY + +A L +++ + D +
Sbjct: 286 KCDNMQDAQILFDKSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSG 345
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
+ CA V L L ++ L +KS + + + N + MY KC L A RVFD + +
Sbjct: 346 VFRACALVKGLSEGLQIYDLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRD 405
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEE 356
W ++I + Q G E + LF +L++ + P+E T + L AC GSL G EI
Sbjct: 406 AVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSVLKACTG-GSLGYGMEIHS 464
Query: 357 YIVLNGLESNRQVQTSLIHMFSKCGRINKAKEV----------------FERVPDKDL-- 398
IV +G+ SN V SLI M+SKCG I +A+++ E++ +K L
Sbjct: 465 SIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRTNVSGTMEELEKMHNKRLQE 524
Query: 399 --AVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSH 446
W+++I+GY + + A LF +M + G+ PD Y ++L C++
Sbjct: 525 MCVSWNSIISGYVMKEQSEDAQMLFTRMMEM-GITPDKFTYATVLDTCAN 573
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 134/498 (26%), Positives = 240/498 (48%), Gaps = 58/498 (11%)
Query: 40 CANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVR----- 94
CA ++ GK+ H+H++ GF+ FV L+ +Y+ DFVS+ V D MP+R
Sbjct: 16 CAKQGALELGKQAHAHMILSGFRPTTFVLNCLLQVYTNSRDFVSASMVFDRMPLRDVVSW 75
Query: 95 ------------------------LRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLE 130
+R VVSWNS++S + + ++I V +M G E
Sbjct: 76 NKMINGYAKSNNMVKASFFFNMMPVRDVVSWNSMLSGYLQNGETLKSIEVFVDMGRAGTE 135
Query: 131 LSASTFVSVVSGCSFRQ----GISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARS 186
TF ++ CS + G+ +H V ++G + ++ A++++ MYAK + E+
Sbjct: 136 FDGRTFAIILKVCSCLEDTSLGMQIHGVVVRVGC-DTDVVAASALLDMYAKGKRFVESLR 194
Query: 187 IFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGN 246
+F I E + VSW+ II G V ++ A +M++++ ++ +++ CA +
Sbjct: 195 VFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSE 254
Query: 247 LFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGG 306
L L +H+ LKS + + + + MY KC +++ A+ +FD + + +MI G
Sbjct: 255 LRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDKSENLNRQSYNAMITG 314
Query: 307 YAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESN 366
Y+Q + +A+ LF RL+ + + +E +L+ ACA + LS+G +I + + + L +
Sbjct: 315 YSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYDLAIKSSLSLD 374
Query: 367 RQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQH 426
V + I M+ KC + +A VF+ + +D W+A+I + +G G + L LF M
Sbjct: 375 VCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLR 434
Query: 427 VEGLKPDAVVYTSILSACS----------HSGMVDDGLSFFKSMQSNFGIEPSIEHYLCL 476
++PD + S+L AC+ HS +V G M SN + S L
Sbjct: 435 SR-IEPDEFTFGSVLKACTGGSLGYGMEIHSSIVKSG------MASNSSVGCS------L 481
Query: 477 VDLLGRAGRFDLALKTIH 494
+D+ + G + A K IH
Sbjct: 482 IDMYSKCGMIEEAEK-IH 498
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 106/242 (43%), Gaps = 32/242 (13%)
Query: 235 LNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLE 294
+N + CA+ G L L H+ ++ SG+ + N L+ +YT D A VFD +
Sbjct: 10 MNRAVECAKQGALELGKQAHAHMILSGFRPTTFVLNCLLQVYTNSRDFVSASMVFDRMPL 69
Query: 295 KSVFLWTSMIGGYA-------------------------------QLGYPSEAVNLFKRL 323
+ V W MI GYA Q G +++ +F +
Sbjct: 70 RDVVSWNKMINGYAKSNNMVKASFFFNMMPVRDVVSWNSMLSGYLQNGETLKSIEVFVDM 129
Query: 324 LKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRI 383
+ + T A L C+ L S G +I +V G +++ ++L+ M++K R
Sbjct: 130 GRAGTEFDGRTFAIILKVCSCLEDTSLGMQIHGVVVRVGCDTDVVAASALLDMYAKGKRF 189
Query: 384 NKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSA 443
++ VF+ +P+K+ WSA+I G + + AL F +MQ V + +Y S+L +
Sbjct: 190 VESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQS-IYASVLRS 248
Query: 444 CS 445
C+
Sbjct: 249 CA 250
>gi|297745590|emb|CBI40755.3| unnamed protein product [Vitis vinifera]
Length = 789
Score = 349 bits (896), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 208/652 (31%), Positives = 330/652 (50%), Gaps = 72/652 (11%)
Query: 17 TYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYS 76
+++SM+ H +KA ++ + ++H K F D V+T ++DMY
Sbjct: 103 SWNSMMSGYFHNGELE--ATIKASGSLGYLKLALQLHGFAEKFDFGIDTCVETSVLDMYI 160
Query: 77 KC----------------------------SDFVSSRKVLD---EMPVRLRSVVSWNSII 105
KC S + S +K L+ +MP R VSWN++I
Sbjct: 161 KCGAMDFAQKVFCRTPNPSLFCWNSMIYGYSKYGSVKKALELFAKMPER--DTVSWNTMI 218
Query: 106 SAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLL 161
S S+ E + EMW G ++ T+ SV+S C+ G +H + ++
Sbjct: 219 SILSQHGFGAETLNTFLEMWNQGFRPNSMTYASVLSACTSIYDLEWGAHLHARIVRMEPC 278
Query: 162 NNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQ 221
++ ++ MYAK G++ AR +FD + E + VSWT++IGG G EA L NQ
Sbjct: 279 L-DVYAGCGLIDMYAKCGRLESARQVFDGLTEHNAVSWTSLIGGVAQAGFQEEALVLFNQ 337
Query: 222 MRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGD 281
MR + V D ++ C ++ + +H+ + G ++ P+ N LV+MY KCGD
Sbjct: 338 MREVPVASDQFTLATVLGVCLSQKDISIGEQLHAHTITRGLDSSVPVANALVTMYAKCGD 397
Query: 282 L-------------------------------ELARRVFDAVLEKSVFLWTSMIGGYAQL 310
+ E AR FD + E++V W SM+ Y Q
Sbjct: 398 VWKANHAFELMPIRDIISWTAMITAFSQAGDVEKAREYFDKMPERNVISWNSMLATYMQR 457
Query: 311 GYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQ 370
GY E + ++ ++L+ V+ + T +T++SACA+L L G +I G SN V
Sbjct: 458 GYWEEGLKVYIQMLREGVKTDWITFSTSISACADLAVLILGNQILAQAEKLGFSSNVSVA 517
Query: 371 TSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGL 430
S++ M+S+CG+I +A+++F + K+L W+AM+ GYA +G G + + +F KM ++ G
Sbjct: 518 NSVVTMYSRCGQIEEAQKMFSSIVMKNLVSWNAMMAGYAQNGQGRKVIEIFEKMLNI-GN 576
Query: 431 KPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLAL 490
PD + Y S+LS CSHSG V +G +F SM + GI P EH++C+VDLLGRAG+ + A
Sbjct: 577 VPDQISYVSVLSGCSHSGFVSEGQYYFLSMTKDHGISPMSEHFVCMVDLLGRAGQLEQAK 636
Query: 491 KTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSAG 550
I++MP + A +W LL+AC H N +L E A KNLL L+ G+Y L+AN+++ +G
Sbjct: 637 NLINQMPFKPNAAIWGALLAACRIHGNTKLAELAVKNLLELDAEGPGSYCLLANIYSESG 696
Query: 551 MWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTL 602
+ R LM D+ + K PG S +E+D V VF D +H D+ + L
Sbjct: 697 KIQGVTNVRKLMRDKGVRKNPGCSWIEVDNRVHVFTVDDTNHPQIKDVHRML 748
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 131/477 (27%), Positives = 224/477 (46%), Gaps = 70/477 (14%)
Query: 37 LKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKC------------------ 78
+K CA++ SI +++H+ ++ +G + F+Q L++MYS C
Sbjct: 11 MKECASLRSIPIARKLHAQLIFMGLKSSIFLQNHLLNMYSNCGLISDAYRVFGGIMFPNV 70
Query: 79 -------SDFVSS------RKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMW 125
S F S K+ ++MP R VSWNS++S + N E +K
Sbjct: 71 YSWNTMISGFADSGQMREAEKLFEKMPE--RDSVSWNSMMSGYFH---NGELEATIKASG 125
Query: 126 VLG-LELS------ASTFVSVVSGCSFRQGISMHCCVYKLGLL-----------NNEIPL 167
LG L+L+ A F + C + M+ K G + N +
Sbjct: 126 SLGYLKLALQLHGFAEKFDFGIDTCVETSVLDMYI---KCGAMDFAQKVFCRTPNPSLFC 182
Query: 168 ANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSV 227
NS++ Y+K+G V +A +F ++ E VSW T+I G E +M
Sbjct: 183 WNSMIYGYSKYGSVKKALELFAKMPERDTVSWNTMISILSQHGFGAETLNTFLEMWNQGF 242
Query: 228 TPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNL----LVSMYTKCGDLE 283
P+ + + +++ C + +L +H+ +++ E LD L+ MY KCG LE
Sbjct: 243 RPNSMTYASVLSACTSIYDLEWGAHLHARIVRM----EPCLDVYAGCGLIDMYAKCGRLE 298
Query: 284 LARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACA 343
AR+VFD + E + WTS+IGG AQ G+ EA+ LF ++ + V ++ TLAT L C
Sbjct: 299 SARQVFDGLTEHNAVSWTSLIGGVAQAGFQEEALVLFNQMREVPVASDQFTLATVLGVCL 358
Query: 344 ELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSA 403
+S G+++ + + GL+S+ V +L+ M++KCG + KA FE +P +D+ W+A
Sbjct: 359 SQKDISIGEQLHAHTITRGLDSSVPVANALVTMYAKCGDVWKANHAFELMPIRDIISWTA 418
Query: 404 MINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSM 460
MI ++ G ++A F KM + + + + S+L+ G ++GL + M
Sbjct: 419 MITAFSQAGDVEKAREYFDKMP-----ERNVISWNSMLATYMQRGYWEEGLKVYIQM 470
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 119/475 (25%), Positives = 206/475 (43%), Gaps = 60/475 (12%)
Query: 129 LELSASTFVSVVSGCSFRQ---GISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEAR 185
+E+S + S+ S R +H + +GL + I L N +++MY+ G +++A
Sbjct: 1 MEMSQKFYESMKECASLRSIPIARKLHAQLIFMGL-KSSIFLQNHLLNMYSNCGLISDAY 59
Query: 186 SIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQM-RRMSVTPDLVV---FLN----- 236
+F I ++ SW T+I G+ + G + EA L +M R SV+ + ++ F N
Sbjct: 60 RVFGGIMFPNVYSWNTMISGFADSGQMREAEKLFEKMPERDSVSWNSMMSGYFHNGELEA 119
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
I +G L LAL +H K + + ++ ++ MY KCG ++ A++VF S
Sbjct: 120 TIKASGSLGYLKLALQLHGFAEKFDFGIDTCVETSVLDMYIKCGAMDFAQKVFCRTPNPS 179
Query: 297 VFLWTSMIGGY-------------------------------AQLGYPSEAVNLFKRLLK 325
+F W SMI GY +Q G+ +E +N F +
Sbjct: 180 LFCWNSMIYGYSKYGSVKKALELFAKMPERDTVSWNTMISILSQHGFGAETLNTFLEMWN 239
Query: 326 TSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINK 385
RPN T A+ LSAC + L G + IV + LI M++KCGR+
Sbjct: 240 QGFRPNSMTYASVLSACTSIYDLEWGAHLHARIVRMEPCLDVYAGCGLIDMYAKCGRLES 299
Query: 386 AKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACS 445
A++VF+ + + + W+++I G A G ++AL LF +M+ V + D ++L C
Sbjct: 300 ARQVFDGLTEHNAVSWTSLIGGVAQAGFQEEALVLFNQMREVP-VASDQFTLATVLGVCL 358
Query: 446 HSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVW 505
+ G + G++ S+ LV + + G A MP+ W
Sbjct: 359 SQKDISIGEQLHAHTITR-GLDSSVPVANALVTMYAKCGDVWKANHAFELMPIR-DIISW 416
Query: 506 APLLSACMKHHNVELG-EY----AAKNLLTLNPGSTGNYILMANLFTSAGMWKEA 555
+++A + +VE EY +N+++ N M + G W+E
Sbjct: 417 TAMITAFSQAGDVEKAREYFDKMPERNVISWNS--------MLATYMQRGYWEEG 463
>gi|49387750|dbj|BAD26238.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|218190136|gb|EEC72563.1| hypothetical protein OsI_05996 [Oryza sativa Indica Group]
Length = 803
Score = 349 bits (896), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 187/597 (31%), Positives = 325/597 (54%), Gaps = 43/597 (7%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANI--------NSIWDGKRV 52
M+ GS ++ L ++ M ++GV + + VL ACA + G+ +
Sbjct: 213 MMGGLAQTGSIDDALRLFARMCRSGVPVDPVSVSSVLGACAQACATDYSVARAFRLGQAI 272
Query: 53 HSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRAC 112
H+ V++ GF D V LIDMY+KC + + KV + +P ++VSWN +I+ +
Sbjct: 273 HALVVRKGFGSDQHVGNSLIDMYTKCVEMDEAVKVFESLPSV--TIVSWNILITGFGQEG 330
Query: 113 LNDEAILVLKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGLLNNEIPLANSVM 172
+A+ VL M G E + T+ ++++ C
Sbjct: 331 SCAKAVEVLSLMQEAGFEPNEVTYSNLLASC----------------------------- 361
Query: 173 SMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLV 232
K V+ AR++FD+I S+ +W T++ GY + L +M+ +V PD
Sbjct: 362 ---IKARDVHSARAMFDKISRPSVTTWNTLLSGYCQEEQHQDTIELFRRMQHQNVQPDRT 418
Query: 233 VFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAV 292
++ C+++G L +HS ++ +N+ + + LV MY+KCG + +AR +F+ +
Sbjct: 419 TLAVILSSCSKLGILDFGRQVHSASVRFLLHNDMFVASGLVDMYSKCGQIGIARSIFNKM 478
Query: 293 LEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGK 352
E+ V W S+I G EA + FK++ + + P E++ A+ +++C+ L S+ G+
Sbjct: 479 TERDVVCWNSIISGLTIHSLNKEAFDFFKQMRENGIMPTESSYASMINSCSRLSSIPHGR 538
Query: 353 EIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHG 412
+I ++ +G + N V ++LI M++KCG ++ A+ F+ + K++ W+ MI+GYA +G
Sbjct: 539 QIHAQVMKDGYDQNVYVGSALIDMYAKCGNMDDARLFFDTMMMKNIVAWNEMIHGYAQNG 598
Query: 413 MGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEH 472
+GD+A+ LF M E KPDAV + ++L+ CSHSG+VD ++FF SM++++GI P EH
Sbjct: 599 LGDKAVELFEYMLTTE-QKPDAVTFIAVLTGCSHSGLVDKAMAFFNSMENSYGIIPLAEH 657
Query: 473 YLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLN 532
Y CL+D LGRAGRF IH+MP + +W LL+AC+ HHN ELG+ AA++L ++
Sbjct: 658 YTCLIDALGRAGRFVEVEALIHKMPCKDDPIIWEVLLAACVVHHNAELGKCAAEHLFRID 717
Query: 533 PGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGD 589
P + Y+L++N++ S G +A+ R LM +R + K G+S ++ V+ F+ D
Sbjct: 718 PKNPSPYVLLSNIYASLGRHGDASAVRALMSNRGVVKGRGYSWIDQKDGVRAFMVAD 774
Score = 158 bits (400), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 127/536 (23%), Positives = 240/536 (44%), Gaps = 115/536 (21%)
Query: 64 DAFVQTGLIDMYS-------------------------------KCSDFVSSRKVLDEMP 92
D F+ L+++YS + D ++R +L MP
Sbjct: 42 DTFLANRLVELYSRAGLPRHALLAFRALPSPNDYSYNAALSAACRAGDLDAARDLLGGMP 101
Query: 93 VRLRSVVSWNSIISAHSRACLN-DEAILVLKEMWVLGLELSASTFVSVVSGC----SFRQ 147
R+ VSWN++ISA +R+ + EA+ + M GL + T SV+S C +
Sbjct: 102 --RRNAVSWNTVISALARSPGDGGEAVEMYGRMRAEGLLPTHFTLASVLSACGGLAALGD 159
Query: 148 GISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYV 207
G H K+GL N+ + N+++ MY K G V +A +F + + VS+T ++GG
Sbjct: 160 GRRCHGVAVKVGLDANQF-VENALLGMYTKCGSVGDAVRLFYGMARPNEVSFTAMMGGLA 218
Query: 208 NVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQ-------VGNLF-LALSMHSLLLK 259
G++++A L +M R V D V +++ CAQ V F L ++H+L+++
Sbjct: 219 QTGSIDDALRLFARMCRSGVPVDPVSVSSVLGACAQACATDYSVARAFRLGQAIHALVVR 278
Query: 260 SGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNL 319
G+ ++ + N L+ MYTKC +++ A +VF+++ ++ W +I G+ Q G ++AV +
Sbjct: 279 KGFGSDQHVGNSLIDMYTKCVEMDEAVKVFESLPSVTIVSWNILITGFGQEGSCAKAVEV 338
Query: 320 FKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYI----------VLNG------- 362
+ + PNE T + L++C + + + + + I +L+G
Sbjct: 339 LSLMQEAGFEPNEVTYSNLLASCIKARDVHSARAMFDKISRPSVTTWNTLLSGYCQEEQH 398
Query: 363 ----------------------------------LESNRQVQTS----LIH--------- 375
L+ RQV ++ L+H
Sbjct: 399 QDTIELFRRMQHQNVQPDRTTLAVILSSCSKLGILDFGRQVHSASVRFLLHNDMFVASGL 458
Query: 376 --MFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPD 433
M+SKCG+I A+ +F ++ ++D+ W+++I+G IH + +A + F +M+ G+ P
Sbjct: 459 VDMYSKCGQIGIARSIFNKMTERDVVCWNSIISGLTIHSLNKEAFDFFKQMRE-NGIMPT 517
Query: 434 AVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLA 489
Y S++++CS + G + + G + ++ L+D+ + G D A
Sbjct: 518 ESSYASMINSCSRLSSIPHGRQIHAQVMKD-GYDQNVYVGSALIDMYAKCGNMDDA 572
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 91/366 (24%), Positives = 174/366 (47%), Gaps = 18/366 (4%)
Query: 169 NSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYV-NVGNVNEAFGLCNQMRRMSV 227
N+ +S + G ++ AR + + + VSW T+I + G+ EA + +MR +
Sbjct: 78 NAALSAACRAGDLDAARDLLGGMPRRNAVSWNTVISALARSPGDGGEAVEMYGRMRAEGL 137
Query: 228 TPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARR 287
P +++ C + L H + +K G + ++N L+ MYTKCG + A R
Sbjct: 138 LPTHFTLASVLSACGGLAALGDGRRCHGVAVKVGLDANQFVENALLGMYTKCGSVGDAVR 197
Query: 288 VFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAE--- 344
+F + + +T+M+GG AQ G +A+ LF R+ ++ V + ++++ L ACA+
Sbjct: 198 LFYGMARPNEVSFTAMMGGLAQTGSIDDALRLFARMCRSGVPVDPVSVSSVLGACAQACA 257
Query: 345 -----LGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLA 399
+ G+ I +V G S++ V SLI M++KC +++A +VFE +P +
Sbjct: 258 TDYSVARAFRLGQAIHALVVRKGFGSDQHVGNSLIDMYTKCVEMDEAVKVFESLPSVTIV 317
Query: 400 VWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKS 459
W+ +I G+ G +A+ + MQ G +P+ V Y+++L++C + V + F
Sbjct: 318 SWNILITGFGQEGSCAKAVEVLSLMQEA-GFEPNEVTYSNLLASCIKARDVHSARAMFDK 376
Query: 460 MQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMP---VEVQAQVWAPLLSACMKHH 516
+ PS+ + L+ + + ++ M V+ A +LS+C K
Sbjct: 377 IS-----RPSVTTWNTLLSGYCQEEQHQDTIELFRRMQHQNVQPDRTTLAVILSSCSKLG 431
Query: 517 NVELGE 522
++ G
Sbjct: 432 ILDFGR 437
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 86/326 (26%), Positives = 152/326 (46%), Gaps = 21/326 (6%)
Query: 251 LSMHSLL-LKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQ 309
L H+LL ++ + D N +S + GDL+ AR + + ++ W ++I A+
Sbjct: 58 LPRHALLAFRALPSPNDYSYNAALSAACRAGDLDAARDLLGGMPRRNAVSWNTVISALAR 117
Query: 310 -LGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQ 368
G EAV ++ R+ + P TLA+ LSAC L +L G+ V GL++N+
Sbjct: 118 SPGDGGEAVEMYGRMRAEGLLPTHFTLASVLSACGGLAALGDGRRCHGVAVKVGLDANQF 177
Query: 369 VQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVE 428
V+ +L+ M++KCG + A +F + + ++AM+ G A G D AL LF +M
Sbjct: 178 VENALLGMYTKCGSVGDAVRLFYGMARPNEVSFTAMMGGLAQTGSIDDALRLFARMCR-S 236
Query: 429 GLKPDAVVYTSILSACSHSGMVDDGLS-FFKSMQS--------NFGIEPSIEHYLCLVDL 479
G+ D V +S+L AC+ + D ++ F+ Q+ FG + + + L+D+
Sbjct: 237 GVPVDPVSVSSVLGACAQACATDYSVARAFRLGQAIHALVVRKGFGSDQHVGN--SLIDM 294
Query: 480 LGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTL--NPGSTG 537
+ D A+K +P V W L++ + + A +L+L G
Sbjct: 295 YTKCVEMDEAVKVFESLP-SVTIVSWNILITGFGQEGSCA----KAVEVLSLMQEAGFEP 349
Query: 538 NYILMANLFTSAGMWKEAATARGLMD 563
N + +NL S ++ +AR + D
Sbjct: 350 NEVTYSNLLASCIKARDVHSARAMFD 375
>gi|225454363|ref|XP_002276073.1| PREDICTED: pentatricopeptide repeat-containing protein At2g46050,
mitochondrial [Vitis vinifera]
Length = 673
Score = 349 bits (896), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 202/598 (33%), Positives = 331/598 (55%), Gaps = 23/598 (3%)
Query: 37 LKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLR 96
LK A + + GK++H+HV+K+G +Q ++ +Y KC +F K+ DEMP L+
Sbjct: 80 LKISAKLGFLHGGKQLHAHVIKLGNCNLLSLQNQVLHVYVKCKEFNDVCKMFDEMP--LK 137
Query: 97 SVVSWNSIIS---------AHSRACLNDEAILVLKEMW----VLGLELSASTFVSVVSGC 143
+VVSWN++I A R + +VL+ M L L AS ++ V C
Sbjct: 138 NVVSWNTLICGVVEGNCKFALVRLGFHYFRQMVLEMMAPNCITLNGLLRASIELNDVGIC 197
Query: 144 SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTII 203
RQ +HC + K G +N + ++++ YAKFG V+EA+S FDE+ +V W ++
Sbjct: 198 --RQ---LHCFILKSGFDSNCF-VGSALVDSYAKFGLVDEAQSAFDEVSSRDLVLWNVMV 251
Query: 204 GGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYN 263
Y G +AFG+ MR V D F ++I C +G+ L +H L+++ ++
Sbjct: 252 SCYALNGVQGKAFGVFKLMRLEGVKGDNFTFTSMINSCGVLGSCGLGKQVHGLIIRLSFD 311
Query: 264 NEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRL 323
+ + + LV MY+K ++E AR+ FD ++ K++ WT+MI GY Q G EA+ L + +
Sbjct: 312 LDVLVASALVDMYSKNENIEDARKAFDGMIVKNIVSWTTMIVGYGQHGDGKEAMRLLQEM 371
Query: 324 LKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRI 383
++ P+E LA+ LS+C L + S+ ++ Y+V NG E+ + +L+ +SKCG I
Sbjct: 372 IRVYTYPDELALASILSSCGNLSATSEVVQVHAYVVENGFEAFLSIANALVSAYSKCGSI 431
Query: 384 NKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSA 443
A + F V + D+ W++++ YA HG+ + + +F KM ++PD V + +LSA
Sbjct: 432 GSAFQSFSSVAEPDIISWTSLMGAYAFHGLSKEGVEVFEKML-FSNVRPDKVAFLGVLSA 490
Query: 444 CSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQ 503
C+H G V +GL +F M + + I P EHY C++DLLGRAG D A+ + MPVE ++
Sbjct: 491 CAHGGFVLEGLHYFNLMINVYQIMPDSEHYTCIIDLLGRAGFLDEAINLLTSMPVEPRSD 550
Query: 504 VWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMD 563
L AC H NV L +A++ L + P NY LM+N++ S G W + A R LM
Sbjct: 551 TLGAFLGACKVHRNVGLARWASEKLFVMEPNEPANYSLMSNMYASVGHWFDVARVRKLMR 610
Query: 564 DRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKELHIKLLEAGYIAEADIV 621
+R K PG S +EI G V FV+ D++H +V + L +L ++L+E +++ +++
Sbjct: 611 ERCDFKVPGCSWMEIAGEVHTFVSRDKTHPRAVQVYGML-DLLVRLMEEDDVSDMEVL 667
Score = 164 bits (416), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 118/420 (28%), Positives = 208/420 (49%), Gaps = 41/420 (9%)
Query: 29 NSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVL 88
N T +L+A +N + +++H +LK GF + FV + L+D Y+K ++
Sbjct: 177 NCITLNGLLRASIELNDVGICRQLHCFILKSGFDSNCFVGSALVDSYAKFGLVDEAQSAF 236
Query: 89 DEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGC----S 144
DE V R +V WN ++S ++ + +A V K M + G++ TF S+++ C S
Sbjct: 237 DE--VSSRDLVLWNVMVSCYALNGVQGKAFGVFKLMRLEGVKGDNFTFTSMINSCGVLGS 294
Query: 145 FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIG 204
G +H + +L + ++ +A++++ MY+K + +AR FD + +IVSWTT+I
Sbjct: 295 CGLGKQVHGLIIRLS-FDLDVLVASALVDMYSKNENIEDARKAFDGMIVKNIVSWTTMIV 353
Query: 205 GYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNN 264
GY G+ EA L +M R+ PD + +++ C + + +H+ ++++G+
Sbjct: 354 GYGQHGDGKEAMRLLQEMIRVYTYPDELALASILSSCGNLSATSEVVQVHAYVVENGFEA 413
Query: 265 EDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLL 324
+ N LVS Y+KCG + A + F +V E + WTS++G YA G E V +F+++L
Sbjct: 414 FLSIANALVSAYSKCGSIGSAFQSFSSVAEPDIISWTSLMGAYAFHGLSKEGVEVFEKML 473
Query: 325 KTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRIN 384
++VRP++ LSACA G VL GL H F N
Sbjct: 474 FSNVRPDKVAFLGVLSACAHGG-----------FVLEGL-----------HYF------N 505
Query: 385 KAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSAC 444
V++ +PD + ++ +I+ G D+A+NL M ++P + + L AC
Sbjct: 506 LMINVYQIMPDSEH--YTCIIDLLGRAGFLDEAINLLTSMP----VEPRSDTLGAFLGAC 559
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 100/380 (26%), Positives = 173/380 (45%), Gaps = 43/380 (11%)
Query: 8 NGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFV 67
NG + + M GV G++FTF ++ +C + S GK+VH ++++ F D V
Sbjct: 257 NGVQGKAFGVFKLMRLEGVKGDNFTFTSMINSCGVLGSCGLGKQVHGLIIRLSFDLDVLV 316
Query: 68 QTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVL 127
+ L+DMYSK + +RK D M V +++VSW ++I + + EA+ +L+EM +
Sbjct: 317 ASALVDMYSKNENIEDARKAFDGMIV--KNIVSWTTMIVGYGQHGDGKEAMRLLQEMIRV 374
Query: 128 GLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNE 183
S++S C + + + +H V + G + +AN+++S Y+K G +
Sbjct: 375 YTYPDELALASILSSCGNLSATSEVVQVHAYVVENG-FEAFLSIANALVSAYSKCGSIGS 433
Query: 184 ARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQ 243
A F + E I+SWT+++G Y G E + +M +V PD V FL ++ CA
Sbjct: 434 AFQSFSSVAEPDIISWTSLMGAYAFHGLSKEGVEVFEKMLFSNVRPDKVAFLGVLSACAH 493
Query: 244 VGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSM 303
G F+ +H NL++++Y D E +T +
Sbjct: 494 GG--FVLEGLHYF-------------NLMINVYQIMPDSE---------------HYTCI 523
Query: 304 IGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGL 363
I + G+ EA+NL L V P TL L AC ++ + E + + +
Sbjct: 524 IDLLGRAGFLDEAINL---LTSMPVEPRSDTLGAFLGACKVHRNVGLARWASEKLFV--M 578
Query: 364 ESNRQVQTSLI-HMFSKCGR 382
E N SL+ +M++ G
Sbjct: 579 EPNEPANYSLMSNMYASVGH 598
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 32/144 (22%), Positives = 69/144 (47%), Gaps = 2/144 (1%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI +G +E + M++ + + +L +C N+++ + +VH++V++ G
Sbjct: 351 MIVGYGQHGDGKEAMRLLQEMIRVYTYPDELALASILSSCGNLSATSEVVQVHAYVVENG 410
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F+ + L+ YSKC S+ + V ++SW S++ A++ L+ E + V
Sbjct: 411 FEAFLSIANALVSAYSKCGSIGSAFQSFSS--VAEPDIISWTSLMGAYAFHGLSKEGVEV 468
Query: 121 LKEMWVLGLELSASTFVSVVSGCS 144
++M + F+ V+S C+
Sbjct: 469 FEKMLFSNVRPDKVAFLGVLSACA 492
>gi|347954516|gb|AEP33758.1| organelle transcript processing 82, partial [Barbarea verna]
Length = 710
Score = 349 bits (895), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 204/631 (32%), Positives = 339/631 (53%), Gaps = 57/631 (9%)
Query: 36 VLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMP--- 92
+L C + S+ + +H+ ++K G + + L++ +F D +P
Sbjct: 8 LLHNCKTLQSL---RIIHAQMIKTGLHNTNYALSRLLEFCILSPNF-------DGLPYAI 57
Query: 93 -----VRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCS--- 144
++ +++ WN++ H+ + AI + M LGL ++ TF ++ C+
Sbjct: 58 SVFETIQEPNLLIWNTMFRGHALSSDPVSAIKLYVCMISLGLLPNSYTFPFLLKSCAKLK 117
Query: 145 -FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGK----------------------- 180
++G +H V KLG ++ + S++SMY K G+
Sbjct: 118 VSKEGQQIHGHVLKLGY-ELDLYVHTSLISMYVKNGRWKDAHKVFDGSSHRDVVSYTALI 176
Query: 181 --------VNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLV 232
+ A+ +FDEI +VSW II GY + GN EA L +M + +V PD
Sbjct: 177 TGYASRGYIESAQKMFDEIPVKDVVSWNAIISGYADTGNNKEALDLFKEMMKTNVKPDES 236
Query: 233 VFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAV 292
+ ++ CAQ G++ L +HS + G + + N L+ +Y+KCG++E A +F +
Sbjct: 237 TMVTVVSACAQSGSIQLGRQVHSWIDDHGLGSNLKIVNALIDLYSKCGEVETACGLFQGL 296
Query: 293 LEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGK 352
K V W +MIGGY L EA+ LF+ +L++ PN+ T+ + L ACA+LG++ G+
Sbjct: 297 SNKDVISWNTMIGGYTHLNLYKEALLLFQEMLRSGENPNDVTMLSILPACAQLGAIDFGR 356
Query: 353 EIEEYI--VLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAI 410
I YI + G+ + ++TSLI M++KCG I A +VF + + L+ +AMI G+A+
Sbjct: 357 WIHVYIDKRIKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSMHHRTLSACNAMIFGFAM 416
Query: 411 HGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSI 470
HG + A ++F +M+ G++PD + + +LSACSHSGM+D G F+SM N+ I P +
Sbjct: 417 HGRANAAFDIFSRMRK-NGIEPDDITFVGLLSACSHSGMLDLGRRIFRSMTQNYKITPKL 475
Query: 471 EHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLT 530
EHY C++DLLG G F A + I+ M +E +W LL AC H NVELGE A+ L+
Sbjct: 476 EHYGCMIDLLGHLGLFKEAEEMINTMTMEPDGVIWCSLLKACKMHGNVELGESFAQKLIK 535
Query: 531 LNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDR 590
+ P + G+Y+L++N++ +AG W E A R L++D+ + K PG S +EID V F+ GD+
Sbjct: 536 IEPENPGSYVLLSNIYATAGRWNEVANIRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDK 595
Query: 591 SHHLSVDIRKTLKELHIKLLEAGYIAEADIV 621
H + +I L+E+ + L EAG++ + V
Sbjct: 596 FHPRNREIYGMLEEMEVLLEEAGFVPDTSEV 626
Score = 219 bits (559), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 151/511 (29%), Positives = 249/511 (48%), Gaps = 78/511 (15%)
Query: 15 LSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDM 74
+ Y M+ G+ NS+TFP +LK+CA + +G+++H HVLK+G++ D +V T LI M
Sbjct: 88 IKLYVCMISLGLLPNSYTFPFLLKSCAKLKVSKEGQQIHGHVLKLGYELDLYVHTSLISM 147
Query: 75 Y---------------SKCSDFV----------------SSRKVLDEMPVRLRSVVSWNS 103
Y S D V S++K+ DE+PV + VVSWN+
Sbjct: 148 YVKNGRWKDAHKVFDGSSHRDVVSYTALITGYASRGYIESAQKMFDEIPV--KDVVSWNA 205
Query: 104 IISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGC----SFRQGISMHCCVYKLG 159
IIS ++ N EA+ + KEM ++ ST V+VVS C S + G +H + G
Sbjct: 206 IISGYADTGNNKEALDLFKEMMKTNVKPDESTMVTVVSACAQSGSIQLGRQVHSWIDDHG 265
Query: 160 LLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLC 219
L +N + + N+++ +Y+K G+V A +F + ++SW T+IGGY ++ EA L
Sbjct: 266 LGSN-LKIVNALIDLYSKCGEVETACGLFQGLSNKDVISWNTMIGGYTHLNLYKEALLLF 324
Query: 220 NQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLK--SGYNNEDPLDNLLVSMYT 277
+M R P+ V L+++ CAQ+G + +H + K G N L L+ MY
Sbjct: 325 QEMLRSGENPNDVTMLSILPACAQLGAIDFGRWIHVYIDKRIKGVTNASSLRTSLIDMYA 384
Query: 278 KCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLAT 337
KCGD+E A +VF+++ +++ +MI G+A G + A ++F R+ K + P++ T
Sbjct: 385 KCGDIEAAHQVFNSMHHRTLSACNAMIFGFAMHGRANAAFDIFSRMRKNGIEPDDITFVG 444
Query: 338 TLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKD 397
LSAC+ G L G+ I + N ++ L H
Sbjct: 445 LLSACSHSGMLDLGRRI-----FRSMTQNYKITPKLEH---------------------- 477
Query: 398 LAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFF 457
+ MI+ G+ +A + M ++PD V++ S+L AC G V+ G SF
Sbjct: 478 ---YGCMIDLLGHLGLFKEAEEMINTMT----MEPDGVIWCSLLKACKMHGNVELGESFA 530
Query: 458 KSMQSNFGIEP-SIEHYLCLVDLLGRAGRFD 487
+ + IEP + Y+ L ++ AGR++
Sbjct: 531 QKL---IKIEPENPGSYVLLSNIYATAGRWN 558
>gi|115459414|ref|NP_001053307.1| Os04g0514500 [Oryza sativa Japonica Group]
gi|32482936|emb|CAE02340.1| OSJNBb0072M01.1 [Oryza sativa Japonica Group]
gi|38345689|emb|CAD41109.2| OSJNBb0070J16.5 [Oryza sativa Japonica Group]
gi|113564878|dbj|BAF15221.1| Os04g0514500 [Oryza sativa Japonica Group]
gi|215768472|dbj|BAH00701.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218195211|gb|EEC77638.1| hypothetical protein OsI_16630 [Oryza sativa Indica Group]
Length = 1027
Score = 349 bits (895), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 196/612 (32%), Positives = 333/612 (54%), Gaps = 11/612 (1%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
M+ N EE + + M++ + + FTF +L AC ++S + GK+VH +K
Sbjct: 397 MLTGFVQNELPEEAIRMFQYMMRYTLQTDEFTFVSILGACTYLSSFYLGKQVHCVTIKNC 456
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
FV +DMYSK ++ + +P + +SWN++ ++ +EA+ +
Sbjct: 457 MDISLFVANATLDMYSKYGAIGDAKALFSLIP--YKDSISWNALTVGLAQNLEEEEAVCM 514
Query: 121 LKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
LK M + G+ +F + ++ CS G +HC K G+ +N + +S++ +Y+
Sbjct: 515 LKRMRLHGITPDDVSFSTAINACSNIRATETGKQIHCLAIKYGICSNH-AVGSSLIDLYS 573
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K G V +R IF ++ +SIV +I G+V N +EA L Q+ + + P V F +
Sbjct: 574 KHGDVESSRKIFAQVDASSIVPINALIAGFVQNNNEDEAIQLFQQVLKDGLKPSSVTFSS 633
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNL-LVSMYTKCGDLELARRVFDAVLE- 294
++ GC+ N + +H LKSG +D L + L +Y K LE A ++ + +
Sbjct: 634 ILSGCSGSLNSAIGKQVHCYTLKSGVLYDDTLLGVSLAGIYLKSKMLEDANKLLTEMPDH 693
Query: 295 KSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEI 354
K++F WT++I GYAQ GY ++ F R+ +VR +EAT A+ L AC+++ + + GKEI
Sbjct: 694 KNLFEWTAIISGYAQNGYGDHSLVSFWRMRHCNVRSDEATFASVLKACSDVTAFADGKEI 753
Query: 355 EEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDK-DLAVWSAMINGYAIHGM 413
I +G S ++LI M+SKCG + + E F+ + +K D+ W++MI G+A +G
Sbjct: 754 HGLITKSGFGSYETATSALIDMYSKCGDVISSFEAFKELKNKQDIMPWNSMIVGFAKNGY 813
Query: 414 GDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHY 473
D+AL LF KM+ ++ +KPD V + +L AC+HSG++ +G FF SM+ +G+ P ++HY
Sbjct: 814 ADEALLLFQKMEELQ-IKPDEVTFLGVLIACTHSGLISEGRHFFGSMRKVYGLTPRLDHY 872
Query: 474 LCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNP 533
C +DLLGR G A + I ++P VWA L+AC H + E G+ AA+ L+ L P
Sbjct: 873 ACFIDLLGRGGHLQEAQEAIDQLPFRPDGVVWATYLAACRMHKDEERGKIAARKLVELEP 932
Query: 534 GSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHH 593
+ Y+L+++L + G W EA R M ++ + K PG S + + +F+ D+ H
Sbjct: 933 QYSSTYVLLSSLHAATGNWAEAKVTRESMREKGVAKFPGCSWITVGNKTSLFLVQDKYHP 992
Query: 594 LSVDIRKTLKEL 605
++ I + L +L
Sbjct: 993 DNLRIYEMLGDL 1004
Score = 207 bits (528), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 138/504 (27%), Positives = 254/504 (50%), Gaps = 17/504 (3%)
Query: 15 LSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDM 74
L Y M G+ TF +L A AN+ + +G+++H+ + G + FV + LI++
Sbjct: 310 LGLYKDMRSWGLWPTRSTFASMLSAAANMKAFVEGQQMHAAAVMHGLDANVFVGSSLINL 369
Query: 75 YSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSAS 134
Y+KC ++ V D +++V WN++++ + L +EAI + + M L+
Sbjct: 370 YAKCGCPSDAKNVFDLSCE--KNIVMWNAMLTGFVQNELPEEAIRMFQYMMRYTLQTDEF 427
Query: 135 TFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDE 190
TFVS++ C SF G +HC K ++ + +AN+ + MY+K+G + +A+++F
Sbjct: 428 TFVSILGACTYLSSFYLGKQVHCVTIK-NCMDISLFVANATLDMYSKYGAIGDAKALFSL 486
Query: 191 IGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLA 250
I +SW + G EA + +MR +TPD V F I C+ +
Sbjct: 487 IPYKDSISWNALTVGLAQNLEEEEAVCMLKRMRLHGITPDDVSFSTAINACSNIRATETG 546
Query: 251 LSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQL 310
+H L +K G + + + L+ +Y+K GD+E +R++F V S+ ++I G+ Q
Sbjct: 547 KQIHCLAIKYGICSNHAVGSSLIDLYSKHGDVESSRKIFAQVDASSIVPINALIAGFVQN 606
Query: 311 GYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSK--GKEIEEYIVLNG-LESNR 367
EA+ LF+++LK ++P+ T ++ LS C+ GSL+ GK++ Y + +G L +
Sbjct: 607 NNEDEAIQLFQQVLKDGLKPSSVTFSSILSGCS--GSLNSAIGKQVHCYTLKSGVLYDDT 664
Query: 368 QVQTSLIHMFSKCGRINKAKEVFERVPD-KDLAVWSAMINGYAIHGMGDQALNLFYKMQH 426
+ SL ++ K + A ++ +PD K+L W+A+I+GYA +G GD +L F++M+H
Sbjct: 665 LLGVSLAGIYLKSKMLEDANKLLTEMPDHKNLFEWTAIISGYAQNGYGDHSLVSFWRMRH 724
Query: 427 VEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSM-QSNFGIEPSIEHYLCLVDLLGRAGR 485
++ D + S+L ACS DG + +S FG + L+D+ + G
Sbjct: 725 CN-VRSDEATFASVLKACSDVTAFADGKEIHGLITKSGFGSYETATS--ALIDMYSKCGD 781
Query: 486 FDLALKTIHEMPVEVQAQVWAPLL 509
+ + E+ + W ++
Sbjct: 782 VISSFEAFKELKNKQDIMPWNSMI 805
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 124/497 (24%), Positives = 234/497 (47%), Gaps = 47/497 (9%)
Query: 6 TNNGSFEETLSTYSSMLQT-GVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQD 64
+GS + L + + T G + F +VL AC+ + + G++VH V+K GF
Sbjct: 133 ARSGSPGDVLGAFRYIRCTAGGRPDQFGLAVVLSACSRVGVLAYGRQVHCDVVKSGFSSS 192
Query: 65 AFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEM 124
F + L+DMY+KC D ++R+V D + + W+S+I+ + R EA+ + M
Sbjct: 193 VFCEAALVDMYAKCGDVPNARRVFDG--IACPDTICWSSMIACYHRVGCYQEALALFSRM 250
Query: 125 WVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEA 184
+G T V+++S LA+S G+++ A
Sbjct: 251 DKMGSAPDQVTLVTIIS------------------------TLASS--------GRLDHA 278
Query: 185 RSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQV 244
++ ++ S V+W +I G+ G GL MR + P F +++ A +
Sbjct: 279 TALLKKMPTPSTVAWNAVISGHAQSGLEFNVLGLYKDMRSWGLWPTRSTFASMLSAAANM 338
Query: 245 GNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMI 304
MH+ + G + + + L+++Y KCG A+ VFD EK++ +W +M+
Sbjct: 339 KAFVEGQQMHAAAVMHGLDANVFVGSSLINLYAKCGCPSDAKNVFDLSCEKNIVMWNAML 398
Query: 305 GGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLE 364
G+ Q P EA+ +F+ +++ +++ +E T + L AC L S GK++ + N ++
Sbjct: 399 TGFVQNELPEEAIRMFQYMMRYTLQTDEFTFVSILGACTYLSSFYLGKQVHCVTIKNCMD 458
Query: 365 SNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKM 424
+ V + + M+SK G I AK +F +P KD W+A+ G A + ++A+ + +M
Sbjct: 459 ISLFVANATLDMYSKYGAIGDAKALFSLIPYKDSISWNALTVGLAQNLEEEEAVCMLKRM 518
Query: 425 QHVEGLKPDAVVYTSILSACSHSGMVDDG-----LSFFKSMQSNFGIEPSIEHYLCLVDL 479
+ + G+ PD V +++ ++ACS+ + G L+ + SN + S L+DL
Sbjct: 519 R-LHGITPDDVSFSTAINACSNIRATETGKQIHCLAIKYGICSNHAVGSS------LIDL 571
Query: 480 LGRAGRFDLALKTIHEM 496
+ G + + K ++
Sbjct: 572 YSKHGDVESSRKIFAQV 588
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 111/398 (27%), Positives = 209/398 (52%), Gaps = 8/398 (2%)
Query: 54 SHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACL 113
S + K+G D +I + + +L +MP S V+WN++IS H+++ L
Sbjct: 248 SRMDKMGSAPDQVTLVTIISTLASSGRLDHATALLKKMPTP--STVAWNAVISGHAQSGL 305
Query: 114 NDEAILVLKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLAN 169
+ + K+M GL + STF S++S + F +G MH GL N + + +
Sbjct: 306 EFNVLGLYKDMRSWGLWPTRSTFASMLSAAANMKAFVEGQQMHAAAVMHGLDAN-VFVGS 364
Query: 170 SVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTP 229
S++++YAK G ++A+++FD E +IV W ++ G+V EA + M R ++
Sbjct: 365 SLINLYAKCGCPSDAKNVFDLSCEKNIVMWNAMLTGFVQNELPEEAIRMFQYMMRYTLQT 424
Query: 230 DLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVF 289
D F++++ C + + +L +H + +K+ + + N + MY+K G + A+ +F
Sbjct: 425 DEFTFVSILGACTYLSSFYLGKQVHCVTIKNCMDISLFVANATLDMYSKYGAIGDAKALF 484
Query: 290 DAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLS 349
+ K W ++ G AQ EAV + KR+ + P++ + +T ++AC+ + +
Sbjct: 485 SLIPYKDSISWNALTVGLAQNLEEEEAVCMLKRMRLHGITPDDVSFSTAINACSNIRATE 544
Query: 350 KGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYA 409
GK+I + G+ SN V +SLI ++SK G + ++++F +V + +A+I G+
Sbjct: 545 TGKQIHCLAIKYGICSNHAVGSSLIDLYSKHGDVESSRKIFAQVDASSIVPINALIAGFV 604
Query: 410 IHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHS 447
+ D+A+ LF ++ +GLKP +V ++SILS CS S
Sbjct: 605 QNNNEDEAIQLFQQVLK-DGLKPSSVTFSSILSGCSGS 641
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 89/361 (24%), Positives = 162/361 (44%), Gaps = 42/361 (11%)
Query: 167 LANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMR-RM 225
L +S++ +Y K G+V A S GE + + ++++ + G+ + G +R
Sbjct: 93 LGDSLVELYCKSGRVGYAWSALGYAGERASGAASSLLSCHARSGSPGDVLGAFRYIRCTA 152
Query: 226 SVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELA 285
PD ++ C++VG L +H ++KSG+++ + LV MY KCGD+ A
Sbjct: 153 GGRPDQFGLAVVLSACSRVGVLAYGRQVHCDVVKSGFSSSVFCEAALVDMYAKCGDVPNA 212
Query: 286 RRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAEL 345
RRVFD + W+SMI Y ++G EA+ LF R+ K P++ TL T +S A
Sbjct: 213 RRVFDGIACPDTICWSSMIACYHRVGCYQEALALFSRMDKMGSAPDQVTLVTIISTLAS- 271
Query: 346 GSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMI 405
GR++ A + +++P W+A+I
Sbjct: 272 ----------------------------------SGRLDHATALLKKMPTPSTVAWNAVI 297
Query: 406 NGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFG 465
+G+A G+ L L+ M+ GL P + S+LSA ++ +G + + G
Sbjct: 298 SGHAQSGLEFNVLGLYKDMRSW-GLWPTRSTFASMLSAAANMKAFVEGQQMHAAAVMH-G 355
Query: 466 IEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAA 525
++ ++ L++L + G A K + ++ E +W +L+ +++ EL E A
Sbjct: 356 LDANVFVGSSLINLYAKCGCPSDA-KNVFDLSCEKNIVMWNAMLTGFVQN---ELPEEAI 411
Query: 526 K 526
+
Sbjct: 412 R 412
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 111/212 (52%), Gaps = 2/212 (0%)
Query: 252 SMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLG 311
++H +L+ G L + LV +Y K G + A E++ +S++ +A+ G
Sbjct: 77 ALHGRILRGGSPLLGRLGDSLVELYCKSGRVGYAWSALGYAGERASGAASSLLSCHARSG 136
Query: 312 YPSEAVNLFKRLLKTSV-RPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQ 370
P + + F+ + T+ RP++ LA LSAC+ +G L+ G+++ +V +G S+ +
Sbjct: 137 SPGDVLGAFRYIRCTAGGRPDQFGLAVVLSACSRVGVLAYGRQVHCDVVKSGFSSSVFCE 196
Query: 371 TSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGL 430
+L+ M++KCG + A+ VF+ + D WS+MI Y G +AL LF +M + G
Sbjct: 197 AALVDMYAKCGDVPNARRVFDGIACPDTICWSSMIACYHRVGCYQEALALFSRMDKM-GS 255
Query: 431 KPDAVVYTSILSACSHSGMVDDGLSFFKSMQS 462
PD V +I+S + SG +D + K M +
Sbjct: 256 APDQVTLVTIISTLASSGRLDHATALLKKMPT 287
>gi|222629201|gb|EEE61333.1| hypothetical protein OsJ_15451 [Oryza sativa Japonica Group]
Length = 1037
Score = 349 bits (895), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 196/612 (32%), Positives = 333/612 (54%), Gaps = 11/612 (1%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
M+ N EE + + M++ + + FTF +L AC ++S + GK+VH +K
Sbjct: 407 MLTGFVQNELPEEAIRMFQYMMRYTLQTDEFTFVSILGACTYLSSFYLGKQVHCVTIKNC 466
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
FV +DMYSK ++ + +P + +SWN++ ++ +EA+ +
Sbjct: 467 MDISLFVANATLDMYSKYGAIGDAKALFSLIP--YKDSISWNALTVGLAQNLEEEEAVCM 524
Query: 121 LKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
LK M + G+ +F + ++ CS G +HC K G+ +N + +S++ +Y+
Sbjct: 525 LKRMRLHGITPDDVSFSTAINACSNIRATETGKQIHCLAIKYGICSNHA-VGSSLIDLYS 583
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K G V +R IF ++ +SIV +I G+V N +EA L Q+ + + P V F +
Sbjct: 584 KHGDVESSRKIFAQVDASSIVPINALIAGFVQNNNEDEAIQLFQQVLKDGLKPSSVTFSS 643
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNL-LVSMYTKCGDLELARRVFDAVLE- 294
++ GC+ N + +H LKSG +D L + L +Y K LE A ++ + +
Sbjct: 644 ILSGCSGSLNSAIGKQVHCYTLKSGVLYDDTLLGVSLAGIYLKSKMLEDANKLLTEMPDH 703
Query: 295 KSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEI 354
K++F WT++I GYAQ GY ++ F R+ +VR +EAT A+ L AC+++ + + GKEI
Sbjct: 704 KNLFEWTAIISGYAQNGYGDHSLVSFWRMRHCNVRSDEATFASVLKACSDVTAFADGKEI 763
Query: 355 EEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDK-DLAVWSAMINGYAIHGM 413
I +G S ++LI M+SKCG + + E F+ + +K D+ W++MI G+A +G
Sbjct: 764 HGLITKSGFGSYETATSALIDMYSKCGDVISSFEAFKELKNKQDIMPWNSMIVGFAKNGY 823
Query: 414 GDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHY 473
D+AL LF KM+ ++ +KPD V + +L AC+HSG++ +G FF SM+ +G+ P ++HY
Sbjct: 824 ADEALLLFQKMEELQ-IKPDEVTFLGVLIACTHSGLISEGRHFFGSMRKVYGLTPRLDHY 882
Query: 474 LCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNP 533
C +DLLGR G A + I ++P VWA L+AC H + E G+ AA+ L+ L P
Sbjct: 883 ACFIDLLGRGGHLQEAQEAIDQLPFRPDGVVWATYLAACRMHKDEERGKIAARKLVELEP 942
Query: 534 GSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHH 593
+ Y+L+++L + G W EA R M ++ + K PG S + + +F+ D+ H
Sbjct: 943 QYSSTYVLLSSLHAATGNWAEAKVTRESMREKGVAKFPGCSWITVGNKTSLFLVQDKYHP 1002
Query: 594 LSVDIRKTLKEL 605
++ I + L +L
Sbjct: 1003 DNLRIYEMLGDL 1014
Score = 207 bits (527), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 138/504 (27%), Positives = 254/504 (50%), Gaps = 17/504 (3%)
Query: 15 LSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDM 74
L Y M G+ TF +L A AN+ + +G+++H+ + G + FV + LI++
Sbjct: 320 LGLYKDMRSWGLWPTRSTFASMLSAAANMKAFVEGQQMHAAAVMHGLDANVFVGSSLINL 379
Query: 75 YSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSAS 134
Y+KC ++ V D +++V WN++++ + L +EAI + + M L+
Sbjct: 380 YAKCGCPSDAKNVFDLSCE--KNIVMWNAMLTGFVQNELPEEAIRMFQYMMRYTLQTDEF 437
Query: 135 TFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDE 190
TFVS++ C SF G +HC K ++ + +AN+ + MY+K+G + +A+++F
Sbjct: 438 TFVSILGACTYLSSFYLGKQVHCVTIK-NCMDISLFVANATLDMYSKYGAIGDAKALFSL 496
Query: 191 IGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLA 250
I +SW + G EA + +MR +TPD V F I C+ +
Sbjct: 497 IPYKDSISWNALTVGLAQNLEEEEAVCMLKRMRLHGITPDDVSFSTAINACSNIRATETG 556
Query: 251 LSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQL 310
+H L +K G + + + L+ +Y+K GD+E +R++F V S+ ++I G+ Q
Sbjct: 557 KQIHCLAIKYGICSNHAVGSSLIDLYSKHGDVESSRKIFAQVDASSIVPINALIAGFVQN 616
Query: 311 GYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSK--GKEIEEYIVLNG-LESNR 367
EA+ LF+++LK ++P+ T ++ LS C+ GSL+ GK++ Y + +G L +
Sbjct: 617 NNEDEAIQLFQQVLKDGLKPSSVTFSSILSGCS--GSLNSAIGKQVHCYTLKSGVLYDDT 674
Query: 368 QVQTSLIHMFSKCGRINKAKEVFERVPD-KDLAVWSAMINGYAIHGMGDQALNLFYKMQH 426
+ SL ++ K + A ++ +PD K+L W+A+I+GYA +G GD +L F++M+H
Sbjct: 675 LLGVSLAGIYLKSKMLEDANKLLTEMPDHKNLFEWTAIISGYAQNGYGDHSLVSFWRMRH 734
Query: 427 VEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSM-QSNFGIEPSIEHYLCLVDLLGRAGR 485
++ D + S+L ACS DG + +S FG + L+D+ + G
Sbjct: 735 CN-VRSDEATFASVLKACSDVTAFADGKEIHGLITKSGFGSYETATS--ALIDMYSKCGD 791
Query: 486 FDLALKTIHEMPVEVQAQVWAPLL 509
+ + E+ + W ++
Sbjct: 792 VISSFEAFKELKNKQDIMPWNSMI 815
Score = 186 bits (473), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 124/495 (25%), Positives = 234/495 (47%), Gaps = 47/495 (9%)
Query: 8 NGSFEETLSTYSSMLQT-GVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAF 66
+GS + L + + T G + F +VL AC+ + + G++VH V+K GF F
Sbjct: 145 SGSPGDVLGAFRYIRCTAGGRPDQFGLAVVLSACSRVGVLAYGRQVHCDVVKSGFSSSVF 204
Query: 67 VQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWV 126
+ L+DMY+KC D ++R+V D + + W+S+I+ + R EA+ + M
Sbjct: 205 CEAALVDMYAKCGDVPNARRVFDG--IACPDTICWSSMIACYHRVGCYQEALALFSRMDK 262
Query: 127 LGLELSASTFVSVVSGCSFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARS 186
+G T V+++S LA+S G+++ A +
Sbjct: 263 MGSAPDQVTLVTIIS------------------------TLASS--------GRLDHATA 290
Query: 187 IFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGN 246
+ ++ S V+W +I G+ G GL MR + P F +++ A +
Sbjct: 291 LLKKMPTPSTVAWNAVISGHAQSGLEFNVLGLYKDMRSWGLWPTRSTFASMLSAAANMKA 350
Query: 247 LFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGG 306
MH+ + G + + + L+++Y KCG A+ VFD EK++ +W +M+ G
Sbjct: 351 FVEGQQMHAAAVMHGLDANVFVGSSLINLYAKCGCPSDAKNVFDLSCEKNIVMWNAMLTG 410
Query: 307 YAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESN 366
+ Q P EA+ +F+ +++ +++ +E T + L AC L S GK++ + N ++ +
Sbjct: 411 FVQNELPEEAIRMFQYMMRYTLQTDEFTFVSILGACTYLSSFYLGKQVHCVTIKNCMDIS 470
Query: 367 RQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQH 426
V + + M+SK G I AK +F +P KD W+A+ G A + ++A+ + +M+
Sbjct: 471 LFVANATLDMYSKYGAIGDAKALFSLIPYKDSISWNALTVGLAQNLEEEEAVCMLKRMR- 529
Query: 427 VEGLKPDAVVYTSILSACSHSGMVDDG-----LSFFKSMQSNFGIEPSIEHYLCLVDLLG 481
+ G+ PD V +++ ++ACS+ + G L+ + SN + S L+DL
Sbjct: 530 LHGITPDDVSFSTAINACSNIRATETGKQIHCLAIKYGICSNHAVGSS------LIDLYS 583
Query: 482 RAGRFDLALKTIHEM 496
+ G + + K ++
Sbjct: 584 KHGDVESSRKIFAQV 598
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 111/398 (27%), Positives = 209/398 (52%), Gaps = 8/398 (2%)
Query: 54 SHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACL 113
S + K+G D +I + + +L +MP S V+WN++IS H+++ L
Sbjct: 258 SRMDKMGSAPDQVTLVTIISTLASSGRLDHATALLKKMPTP--STVAWNAVISGHAQSGL 315
Query: 114 NDEAILVLKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLAN 169
+ + K+M GL + STF S++S + F +G MH GL N + + +
Sbjct: 316 EFNVLGLYKDMRSWGLWPTRSTFASMLSAAANMKAFVEGQQMHAAAVMHGLDAN-VFVGS 374
Query: 170 SVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTP 229
S++++YAK G ++A+++FD E +IV W ++ G+V EA + M R ++
Sbjct: 375 SLINLYAKCGCPSDAKNVFDLSCEKNIVMWNAMLTGFVQNELPEEAIRMFQYMMRYTLQT 434
Query: 230 DLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVF 289
D F++++ C + + +L +H + +K+ + + N + MY+K G + A+ +F
Sbjct: 435 DEFTFVSILGACTYLSSFYLGKQVHCVTIKNCMDISLFVANATLDMYSKYGAIGDAKALF 494
Query: 290 DAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLS 349
+ K W ++ G AQ EAV + KR+ + P++ + +T ++AC+ + +
Sbjct: 495 SLIPYKDSISWNALTVGLAQNLEEEEAVCMLKRMRLHGITPDDVSFSTAINACSNIRATE 554
Query: 350 KGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYA 409
GK+I + G+ SN V +SLI ++SK G + ++++F +V + +A+I G+
Sbjct: 555 TGKQIHCLAIKYGICSNHAVGSSLIDLYSKHGDVESSRKIFAQVDASSIVPINALIAGFV 614
Query: 410 IHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHS 447
+ D+A+ LF ++ +GLKP +V ++SILS CS S
Sbjct: 615 QNNNEDEAIQLFQQVLK-DGLKPSSVTFSSILSGCSGS 651
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 89/361 (24%), Positives = 162/361 (44%), Gaps = 42/361 (11%)
Query: 167 LANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMR-RM 225
L +S++ +Y K G+V A S GE + + ++++ + G+ + G +R
Sbjct: 103 LGDSLVELYCKSGRVGYAWSALGYAGERASGAASSLLSCHARSGSPGDVLGAFRYIRCTA 162
Query: 226 SVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELA 285
PD ++ C++VG L +H ++KSG+++ + LV MY KCGD+ A
Sbjct: 163 GGRPDQFGLAVVLSACSRVGVLAYGRQVHCDVVKSGFSSSVFCEAALVDMYAKCGDVPNA 222
Query: 286 RRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAEL 345
RRVFD + W+SMI Y ++G EA+ LF R+ K P++ TL T +S A
Sbjct: 223 RRVFDGIACPDTICWSSMIACYHRVGCYQEALALFSRMDKMGSAPDQVTLVTIISTLAS- 281
Query: 346 GSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMI 405
GR++ A + +++P W+A+I
Sbjct: 282 ----------------------------------SGRLDHATALLKKMPTPSTVAWNAVI 307
Query: 406 NGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFG 465
+G+A G+ L L+ M+ GL P + S+LSA ++ +G + + G
Sbjct: 308 SGHAQSGLEFNVLGLYKDMRSW-GLWPTRSTFASMLSAAANMKAFVEGQQMHAAAVMH-G 365
Query: 466 IEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAA 525
++ ++ L++L + G A K + ++ E +W +L+ +++ EL E A
Sbjct: 366 LDANVFVGSSLINLYAKCGCPSDA-KNVFDLSCEKNIVMWNAMLTGFVQN---ELPEEAI 421
Query: 526 K 526
+
Sbjct: 422 R 422
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 111/212 (52%), Gaps = 2/212 (0%)
Query: 252 SMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLG 311
++H +L+ G L + LV +Y K G + A E++ +S++ +A+ G
Sbjct: 87 ALHGRILRGGSPLLGRLGDSLVELYCKSGRVGYAWSALGYAGERASGAASSLLSCHARSG 146
Query: 312 YPSEAVNLFKRLLKTSV-RPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQ 370
P + + F+ + T+ RP++ LA LSAC+ +G L+ G+++ +V +G S+ +
Sbjct: 147 SPGDVLGAFRYIRCTAGGRPDQFGLAVVLSACSRVGVLAYGRQVHCDVVKSGFSSSVFCE 206
Query: 371 TSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGL 430
+L+ M++KCG + A+ VF+ + D WS+MI Y G +AL LF +M + G
Sbjct: 207 AALVDMYAKCGDVPNARRVFDGIACPDTICWSSMIACYHRVGCYQEALALFSRMDKM-GS 265
Query: 431 KPDAVVYTSILSACSHSGMVDDGLSFFKSMQS 462
PD V +I+S + SG +D + K M +
Sbjct: 266 APDQVTLVTIISTLASSGRLDHATALLKKMPT 297
>gi|302804548|ref|XP_002984026.1| hypothetical protein SELMODRAFT_30095 [Selaginella moellendorffii]
gi|300148378|gb|EFJ15038.1| hypothetical protein SELMODRAFT_30095 [Selaginella moellendorffii]
Length = 745
Score = 349 bits (895), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 190/616 (30%), Positives = 335/616 (54%), Gaps = 8/616 (1%)
Query: 7 NNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAF 66
N ++E L Y M++ + +++T VL AC + + +G+ V ++GF++D
Sbjct: 45 QNAMYQEALEVYKEMVRKEISIDAYTLSSVLAACTKLLDVEEGRMVQRKAEELGFEKDVV 104
Query: 67 VQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWV 126
V T LI +++KC + V M +R ++S ++I A+ R ND A+ +M
Sbjct: 105 VATSLIHLFAKCGCLEEAESVFRSMGA-MRDIISVTAMIGAYVRHGKNDLALDTYWKMRS 163
Query: 127 LGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVN 182
GLE A T+ +++ CS G +H + + N I + N++++MYAK G +
Sbjct: 164 QGLEPDAFTYAAILGACSSPDFLLDGKHIHKHILESKHFGN-ISVRNALITMYAKCGSLK 222
Query: 183 EARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCA 242
+++S+F + +VSW +I Y G+ +AF L ++M + TPD+ F +++ CA
Sbjct: 223 DSKSLFLTMDVKDVVSWNAMIAAYTLYGHDKDAFSLFHRMCTLGHTPDIYTFSSILGACA 282
Query: 243 QVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTS 302
L +H + G++ + + N L+SM+T+CG LE ARR F ++ +K + W +
Sbjct: 283 SPKRLEDGRMLHVRITARGFDRDFAMQNNLISMFTRCGSLESARRYFYSIEKKELGAWNT 342
Query: 303 MIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNG 362
M+ YAQ +A+ L+K +L P+ T ++ + +CA LG+L +GK I E G
Sbjct: 343 MLAAYAQFDKGKDALFLYKNMLLEGFTPDRFTFSSVVDSCASLGALREGKFIHECSTSCG 402
Query: 363 LESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFY 422
E + + T+L++M++KCG + AK+ F+ + +KD+ WSAMI A HG ++AL L +
Sbjct: 403 FEKDVILGTALVNMYAKCGSLADAKKSFDGISNKDVVSWSAMIAASAQHGHAEEALELSH 462
Query: 423 KMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGR 482
M +++G+ + V +S+L ACSH G + +G+ +F + +FGIE E+ + +DLLGR
Sbjct: 463 LM-NLQGIAQNEVTASSVLHACSHGGRLYEGIDYFMGLSQDFGIERDEENTVGFIDLLGR 521
Query: 483 AGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILM 542
AG A +H MP +V LL C H +V G+ K ++ L P + G+Y+L+
Sbjct: 522 AGWLKEAEHVLHTMPFKVSFVALVTLLGGCKVHGDVRRGKALTKRIVALEPENPGSYVLL 581
Query: 543 ANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTL 602
N++ +AG W + A R M + + ++ G S +E + F GD S+ +++IR L
Sbjct: 582 NNMYAAAGRWDDVAKLRRYMRKKGVKRQTGCSSIEYRDKIYEFSVGDTSNPRNLEIRAEL 641
Query: 603 KELHIKLL-EAGYIAE 617
+ L+ ++ E GY+ +
Sbjct: 642 ERLYSRMKEEEGYVPD 657
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 126/461 (27%), Positives = 225/461 (48%), Gaps = 11/461 (2%)
Query: 64 DAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKE 123
D F+ +I MY KC +R+V D ++ R+ SW+ ++ + + + EA+ V KE
Sbjct: 1 DTFLANMIIQMYGKCKSPEDARQVFDR--IKQRNAFSWSILVECYVQNAMYQEALEVYKE 58
Query: 124 MWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFG 179
M + + A T SV++ C+ +G + +LG ++ +A S++ ++AK G
Sbjct: 59 MVRKEISIDAYTLSSVLAACTKLLDVEEGRMVQRKAEELG-FEKDVVVATSLIHLFAKCG 117
Query: 180 KVNEARSIFDEIGE-TSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLI 238
+ EA S+F +G I+S T +IG YV G + A +MR + PD + ++
Sbjct: 118 CLEEAESVFRSMGAMRDIISVTAMIGAYVRHGKNDLALDTYWKMRSQGLEPDAFTYAAIL 177
Query: 239 LGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVF 298
C+ L +H +L+S + + N L++MY KCG L+ ++ +F + K V
Sbjct: 178 GACSSPDFLLDGKHIHKHILESKHFGNISVRNALITMYAKCGSLKDSKSLFLTMDVKDVV 237
Query: 299 LWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYI 358
W +MI Y G+ +A +LF R+ P+ T ++ L ACA L G+ + I
Sbjct: 238 SWNAMIAAYTLYGHDKDAFSLFHRMCTLGHTPDIYTFSSILGACASPKRLEDGRMLHVRI 297
Query: 359 VLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQAL 418
G + + +Q +LI MF++CG + A+ F + K+L W+ M+ YA G AL
Sbjct: 298 TARGFDRDFAMQNNLISMFTRCGSLESARRYFYSIEKKELGAWNTMLAAYAQFDKGKDAL 357
Query: 419 NLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVD 478
L YK +EG PD ++S++ +C+ G + +G F ++ G E + LV+
Sbjct: 358 FL-YKNMLLEGFTPDRFTFSSVVDSCASLGALREG-KFIHECSTSCGFEKDVILGTALVN 415
Query: 479 LLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVE 519
+ + G A K+ + + W+ +++A +H + E
Sbjct: 416 MYAKCGSLADAKKSFDGISNK-DVVSWSAMIAASAQHGHAE 455
Score = 185 bits (469), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 120/444 (27%), Positives = 210/444 (47%), Gaps = 13/444 (2%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI +G + L TY M G+ ++FT+ +L AC++ + + DGK +H H+L+
Sbjct: 141 MIGAYVRHGKNDLALDTYWKMRSQGLEPDAFTYAAILGACSSPDFLLDGKHIHKHILESK 200
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+ V+ LI MY+KC S+ + M V + VVSWN++I+A++ + +A +
Sbjct: 201 HFGNISVRNALITMYAKCGSLKDSKSLFLTMDV--KDVVSWNAMIAAYTLYGHDKDAFSL 258
Query: 121 LKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
M LG TF S++ C+ G +H + G + + + N+++SM+
Sbjct: 259 FHRMCTLGHTPDIYTFSSILGACASPKRLEDGRMLHVRITARG-FDRDFAMQNNLISMFT 317
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
+ G + AR F I + + +W T++ Y +A L M TPD F +
Sbjct: 318 RCGSLESARRYFYSIEKKELGAWNTMLAAYAQFDKGKDALFLYKNMLLEGFTPDRFTFSS 377
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
++ CA +G L +H G+ + L LV+MY KCG L A++ FD + K
Sbjct: 378 VVDSCASLGALREGKFIHECSTSCGFEKDVILGTALVNMYAKCGSLADAKKSFDGISNKD 437
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEE 356
V W++MI AQ G+ EA+ L + + NE T ++ L AC+ G L +G I+
Sbjct: 438 VVSWSAMIAASAQHGHAEEALELSHLMNLQGIAQNEVTASSVLHACSHGGRLYEG--IDY 495
Query: 357 YIVLN---GLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDK-DLAVWSAMINGYAIHG 412
++ L+ G+E + + I + + G + +A+ V +P K ++ G +HG
Sbjct: 496 FMGLSQDFGIERDEENTVGFIDLLGRAGWLKEAEHVLHTMPFKVSFVALVTLLGGCKVHG 555
Query: 413 MGDQALNLFYKMQHVEGLKPDAVV 436
+ L ++ +E P + V
Sbjct: 556 DVRRGKALTKRIVALEPENPGSYV 579
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 92/364 (25%), Positives = 176/364 (48%), Gaps = 4/364 (1%)
Query: 167 LANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMS 226
LAN ++ MY K +AR +FD I + + SW+ ++ YV EA + +M R
Sbjct: 4 LANMIIQMYGKCKSPEDARQVFDRIKQRNAFSWSILVECYVQNAMYQEALEVYKEMVRKE 63
Query: 227 VTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELAR 286
++ D +++ C ++ ++ + + G+ + + L+ ++ KCG LE A
Sbjct: 64 ISIDAYTLSSVLAACTKLLDVEEGRMVQRKAEELGFEKDVVVATSLIHLFAKCGCLEEAE 123
Query: 287 RVFDAV-LEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAEL 345
VF ++ + + T+MIG Y + G A++ + ++ + P+ T A L AC+
Sbjct: 124 SVFRSMGAMRDIISVTAMIGAYVRHGKNDLALDTYWKMRSQGLEPDAFTYAAILGACSSP 183
Query: 346 GSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMI 405
L GK I ++I+ + N V+ +LI M++KCG + +K +F + KD+ W+AMI
Sbjct: 184 DFLLDGKHIHKHILESKHFGNISVRNALITMYAKCGSLKDSKSLFLTMDVKDVVSWNAMI 243
Query: 406 NGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFG 465
Y ++G A +LF++M + G PD ++SIL AC+ ++DG + + G
Sbjct: 244 AAYTLYGHDKDAFSLFHRMCTL-GHTPDIYTFSSILGACASPKRLEDGRMLHVRITAR-G 301
Query: 466 IEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAA 525
+ L+ + R G + A + + + + + W +L+A + + +
Sbjct: 302 FDRDFAMQNNLISMFTRCGSLESARRYFYSIE-KKELGAWNTMLAAYAQFDKGKDALFLY 360
Query: 526 KNLL 529
KN+L
Sbjct: 361 KNML 364
>gi|297800728|ref|XP_002868248.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297314084|gb|EFH44507.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 725
Score = 349 bits (895), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 190/617 (30%), Positives = 327/617 (52%), Gaps = 41/617 (6%)
Query: 37 LKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLR 96
L C ++N I K++H+H+L+ + S + + + +
Sbjct: 22 LSFCKSLNHI---KQLHAHILRTVINHKLNSFLFNLSFSSSSINLSYALNLFSSISPLPE 78
Query: 97 SVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCS----FRQGISMH 152
S+V +NS++ SR+ IL + + +G +F ++ S +G+ +H
Sbjct: 79 SIV-FNSLLRDLSRSGEPRATILFYQRIRHVGGRFDRISFPPILKAVSKVSALFEGMELH 137
Query: 153 CCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNV 212
+K+ L++ + +M MYA G++N AR++FDE+ + +V+W T+I Y G +
Sbjct: 138 GFAFKIATLSDPF-VETGLMDMYAACGRINYARNVFDEMSQRDVVTWNTMIERYCRFGLL 196
Query: 213 NEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLL 272
+EAF L +M+ +V PD ++ N++ C + GN+ +++ L+++ + L L
Sbjct: 197 DEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYDFLIENDVRMDTHLLTAL 256
Query: 273 VSMY-------------------------------TKCGDLELARRVFDAVLEKSVFLWT 301
V+MY +K G L+ AR +FD K + WT
Sbjct: 257 VTMYAGAGCMDMAMEFFRKMSVRNLFVSTAMVSGYSKAGRLDDARVIFDQTEMKDLVCWT 316
Query: 302 SMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLN 361
+MI YA+ +P EA+ +F+ + + ++P+ T+ + +SAC LG+L K K + Y LN
Sbjct: 317 TMISAYAESDHPQEALRVFEEMCCSGIKPDVVTMLSVISACVNLGTLDKAKWVHRYTHLN 376
Query: 362 GLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLF 421
GLES + +LI+M++KCG ++ A++VFE++P +++ WS+MIN +A+HG +L+LF
Sbjct: 377 GLESVLPIDNALINMYAKCGGLDAARDVFEKMPTRNVVSWSSMINAFAMHGEASDSLSLF 436
Query: 422 YKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLG 481
+M+ E ++P+ V + +L CSHSG+V++G F SM + I P IEHY C+VDL G
Sbjct: 437 AQMKQ-ENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKIEHYGCMVDLFG 495
Query: 482 RAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYIL 541
RA AL+ I MP+ +W L+SAC H +ELGE AAK +L L P G +L
Sbjct: 496 RANLLREALEVIESMPMAPNVVIWGSLMSACRVHGELELGELAAKRILKLEPDHDGALVL 555
Query: 542 MANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKT 601
M+N++ W R +M+ +++ KE G S+++++G F+ GD+ H S +I
Sbjct: 556 MSNIYAREYRWDYVRIIRWIMEKKKVFKEKGLSRIDLNGKSHEFLIGDKRHKQSNEIYTK 615
Query: 602 LKELHIKLLEAGYIAEA 618
L E+ KL AGY+ +
Sbjct: 616 LYEVVSKLKLAGYVPDG 632
Score = 206 bits (525), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 126/469 (26%), Positives = 232/469 (49%), Gaps = 51/469 (10%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
++R+ + +G T+ Y + G + +FP +LKA + ++++++G +H K+
Sbjct: 85 LLRDLSRSGEPRATILFYQRIRHVGGRFDRISFPPILKAVSKVSALFEGMELHGFAFKIA 144
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
D FV+TGL+DMY+ C +R V DEM R VV+WN++I + R L DEA +
Sbjct: 145 TLSDPFVETGLMDMYAACGRINYARNVFDEMS--QRDVVTWNTMIERYCRFGLLDEAFKL 202
Query: 121 LKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGLLNNEIPL------------- 167
+EM + ++VS C + + +Y L+ N++ +
Sbjct: 203 FEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYDF-LIENDVRMDTHLLTALVTMYA 261
Query: 168 ----------------------ANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGG 205
+ +++S Y+K G++++AR IFD+ +V WTT+I
Sbjct: 262 GAGCMDMAMEFFRKMSVRNLFVSTAMVSGYSKAGRLDDARVIFDQTEMKDLVCWTTMISA 321
Query: 206 YVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNE 265
Y + EA + +M + PD+V L++I C +G L A +H +G +
Sbjct: 322 YAESDHPQEALRVFEEMCCSGIKPDVVTMLSVISACVNLGTLDKAKWVHRYTHLNGLESV 381
Query: 266 DPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLK 325
P+DN L++MY KCG L+ AR VF+ + ++V W+SMI +A G S++++LF ++ +
Sbjct: 382 LPIDNALINMYAKCGGLDAARDVFEKMPTRNVVSWSSMINAFAMHGEASDSLSLFAQMKQ 441
Query: 326 TSVRPNEATLATTLSACAELGSLSKGKEI-----EEYIVLNGLESNRQVQTSLIHMFSKC 380
+V PNE T L C+ G + +GK+I +EY + +E ++ +F +
Sbjct: 442 ENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKIEH----YGCMVDLFGRA 497
Query: 381 GRINKAKEVFERVP-DKDLAVWSAMINGYAIHG---MGDQALNLFYKMQ 425
+ +A EV E +P ++ +W ++++ +HG +G+ A K++
Sbjct: 498 NLLREALEVIESMPMAPNVVIWGSLMSACRVHGELELGELAAKRILKLE 546
>gi|449500331|ref|XP_004161068.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g33680-like [Cucumis sativus]
Length = 710
Score = 348 bits (894), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 202/586 (34%), Positives = 311/586 (53%), Gaps = 10/586 (1%)
Query: 29 NSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVL 88
N TF V A ++ + G + H+ +K D FV + LI+MY K + +RKV
Sbjct: 112 NGHTFSGVFTAASSSPETFGGLQAHALAIKTSNFYDVFVGSSLINMYCKIGCMLDARKVF 171
Query: 89 DEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCSF--- 145
D +P R + VSW +IIS ++ + EA + M + SV+S +
Sbjct: 172 DTIPER--NTVSWATIISGYAMERMAFEAWELFXLMRREEGAHDKFIYTSVLSALTVPDL 229
Query: 146 -RQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIG 204
G +HC K GLL+ + N++++MY K G +++A F+ G+ ++W+ +I
Sbjct: 230 VHYGKQIHCLALKNGLLSIA-SVGNALVTMYGKCGCLDDALKTFELSGDKDDITWSAMIT 288
Query: 205 GYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNN 264
GY G+ +EA L M P F+ +I C+ +G L +H LK+GY
Sbjct: 289 GYAQAGDSHEALNLFYNMHLNGNKPSEFTFVGVINACSDIGALEEGKQIHGYSLKAGYEC 348
Query: 265 EDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLL 324
+ LV MY KCG L AR+ FD + E + LWTSMI GYAQ G A+ L+ R+
Sbjct: 349 QIYFMTALVDMYAKCGSLVDARKGFDYLKEPDIVLWTSMISGYAQNGENETALTLYCRMQ 408
Query: 325 KTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRIN 384
+ P+E T+A+ L AC+ L +L +GK+I + G + ++L M++KCG +
Sbjct: 409 MERIMPHELTMASVLRACSSLAALEQGKQIHAQTIKYGFSLEVPIGSALSTMYAKCGSLE 468
Query: 385 KAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSAC 444
VF R+P +D+ W+AMI+G + +G G +AL LF +++H KPD V + ++LSAC
Sbjct: 469 DGNLVFRRMPSRDIMTWNAMISGLSQNGEGLKALELFEELRH-GTTKPDYVTFVNVLSAC 527
Query: 445 SHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQV 504
SH G+V+ G +F+ M FGI P +EHY C+VD+L RAG+ + I ++ +
Sbjct: 528 SHMGLVERGKVYFRMMLDEFGIVPRVEHYACMVDILSRAGKLHETKEFIESATIDHGMCL 587
Query: 505 WAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDD 564
W LL AC + N ELG YA + L+ L + YIL+++++T+ G + R LM
Sbjct: 588 WRILLGACRNYRNYELGAYAGEKLMELGSQESSAYILLSSIYTALGRSDDVERVRRLMKL 647
Query: 565 RRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKEL--HIK 608
R + KEPG S +E+ V VFV GD+ H V I L+ L H+K
Sbjct: 648 RGVNKEPGCSWIELKSQVHVFVVGDQIHPQIVKICSELRRLRDHMK 693
Score = 209 bits (531), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 130/446 (29%), Positives = 231/446 (51%), Gaps = 11/446 (2%)
Query: 32 TFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEM 91
+F +L C + GK +H+ +L+ G ++ L+++Y+KC V ++ V +
Sbjct: 12 SFVDLLLRCTRQKDLQKGKAIHAQLLRTGSFSSVYLTNSLVNLYAKCGSIVKAKLVFE-- 69
Query: 92 PVRLRSVVSWNSIISAHSRACLNDEAIL--VLKEMWVLGLELSASTFVSVVSGCSFRQ-- 147
+ + VVSWN +I+ +S+ + + + + M + TF V + S
Sbjct: 70 SITNKDVVSWNCLINGYSQKGTVGYSFVMELFQRMRAENTLPNGHTFSGVFTAASSSPET 129
Query: 148 --GISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGG 205
G+ H K ++ + +S+++MY K G + +AR +FD I E + VSW TII G
Sbjct: 130 FGGLQAHALAIKTSNF-YDVFVGSSLINMYCKIGCMLDARKVFDTIPERNTVSWATIISG 188
Query: 206 YVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNE 265
Y EA+ L MRR D ++ +++ + +H L LK+G +
Sbjct: 189 YAMERMAFEAWELFXLMRREEGAHDKFIYTSVLSALTVPDLVHYGKQIHCLALKNGLLSI 248
Query: 266 DPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLK 325
+ N LV+MY KCG L+ A + F+ +K W++MI GYAQ G EA+NLF +
Sbjct: 249 ASVGNALVTMYGKCGCLDDALKTFELSGDKDDITWSAMITGYAQAGDSHEALNLFYNMHL 308
Query: 326 TSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINK 385
+P+E T ++AC+++G+L +GK+I Y + G E T+L+ M++KCG +
Sbjct: 309 NGNKPSEFTFVGVINACSDIGALEEGKQIHGYSLKAGYECQIYFMTALVDMYAKCGSLVD 368
Query: 386 AKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACS 445
A++ F+ + + D+ +W++MI+GYA +G + AL L+ +MQ +E + P + S+L ACS
Sbjct: 369 ARKGFDYLKEPDIVLWTSMISGYAQNGENETALTLYCRMQ-MERIMPHELTMASVLRACS 427
Query: 446 HSGMVDDGLSFF-KSMQSNFGIEPSI 470
++ G ++++ F +E I
Sbjct: 428 SLAALEQGKQIHAQTIKYGFSLEVPI 453
Score = 165 bits (417), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 114/383 (29%), Positives = 188/383 (49%), Gaps = 10/383 (2%)
Query: 135 TFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDE 190
+FV ++ C+ ++G ++H + + G ++ + L NS++++YAK G + +A+ +F+
Sbjct: 12 SFVDLLLRCTRQKDLQKGKAIHAQLLRTGSFSS-VYLTNSLVNLYAKCGSIVKAKLVFES 70
Query: 191 IGETSIVSWTTIIGGYVNVGNVNEAF--GLCNQMRRMSVTPDLVVFLNLILGCAQVGNLF 248
I +VSW +I GY G V +F L +MR + P+ F + + F
Sbjct: 71 ITNKDVVSWNCLINGYSQKGTVGYSFVMELFQRMRAENTLPNGHTFSGVFTAASSSPETF 130
Query: 249 LALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYA 308
L H+L +K+ + + + L++MY K G + AR+VFD + E++ W ++I GYA
Sbjct: 131 GGLQAHALAIKTSNFYDVFVGSSLINMYCKIGCMLDARKVFDTIPERNTVSWATIISGYA 190
Query: 309 QLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQ 368
EA LF + + ++ + LSA + GK+I + NGL S
Sbjct: 191 MERMAFEAWELFXLMRREEGAHDKFIYTSVLSALTVPDLVHYGKQIHCLALKNGLLSIAS 250
Query: 369 VQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVE 428
V +L+ M+ KCG ++ A + FE DKD WSAMI GYA G +ALNLFY M H+
Sbjct: 251 VGNALVTMYGKCGCLDDALKTFELSGDKDDITWSAMITGYAQAGDSHEALNLFYNM-HLN 309
Query: 429 GLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDL 488
G KP + +++ACS G +++G G E I LVD+ + G
Sbjct: 310 GNKPSEFTFVGVINACSDIGALEEGKQ-IHGYSLKAGYECQIYFMTALVDMYAKCGSLVD 368
Query: 489 ALKTIHEMPVEVQAQVWAPLLSA 511
A K + E +W ++S
Sbjct: 369 ARKGFDYLK-EPDIVLWTSMISG 390
Score = 128 bits (322), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 72/249 (28%), Positives = 128/249 (51%), Gaps = 7/249 (2%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI G E L+ + +M G + FTF V+ AC++I ++ +GK++H + LK G
Sbjct: 286 MITGYAQAGDSHEALNLFYNMHLNGNKPSEFTFVGVINACSDIGALEEGKQIHGYSLKAG 345
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
++ + T L+DMY+KC V +RK D + + +V W S+IS +++ N+ A+ +
Sbjct: 346 YECQIYFMTALVDMYAKCGSLVDARKGFDYL--KEPDIVLWTSMISGYAQNGENETALTL 403
Query: 121 LKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
M + + T SV+ CS QG +H K G + E+P+ +++ +MYA
Sbjct: 404 YCRMQMERIMPHELTMASVLRACSSLAALEQGKQIHAQTIKYG-FSLEVPIGSALSTMYA 462
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K G + + +F + I++W +I G G +A L ++R + PD V F+N
Sbjct: 463 KCGSLEDGNLVFRRMPSRDIMTWNAMISGLSQNGEGLKALELFEELRHGTTKPDYVTFVN 522
Query: 237 LILGCAQVG 245
++ C+ +G
Sbjct: 523 VLSACSHMG 531
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 65/127 (51%), Gaps = 3/127 (2%)
Query: 330 PNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEV 389
P + L C L KGK I ++ G S+ + SL+++++KCG I KAK V
Sbjct: 8 PQHRSFVDLLLRCTRQKDLQKGKAIHAQLLRTGSFSSVYLTNSLVNLYAKCGSIVKAKLV 67
Query: 390 FERVPDKDLAVWSAMINGYAIHGMGDQA--LNLFYKMQHVEGLKPDAVVYTSILSACSHS 447
FE + +KD+ W+ +INGY+ G + + LF +M+ E P+ ++ + +A S S
Sbjct: 68 FESITNKDVVSWNCLINGYSQKGTVGYSFVMELFQRMR-AENTLPNGHTFSGVFTAASSS 126
Query: 448 GMVDDGL 454
GL
Sbjct: 127 PETFGGL 133
>gi|15233590|ref|NP_193861.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207660|sp|Q9STE1.1|PP333_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g21300
gi|3402749|emb|CAA20195.1| putative protein [Arabidopsis thaliana]
gi|7268926|emb|CAB79129.1| putative protein [Arabidopsis thaliana]
gi|332659037|gb|AEE84437.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 857
Score = 348 bits (894), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 192/621 (30%), Positives = 340/621 (54%), Gaps = 7/621 (1%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
M+ G+ + + +S M + N+ TF VL CA+ I G ++H V+ G
Sbjct: 210 MLNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSG 269
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+ ++ L+ MYSKC F + K+ M V+WN +IS + ++ L +E++
Sbjct: 270 VDFEGSIKNSLLSMYSKCGRFDDASKLFRMM--SRADTVTWNCMISGYVQSGLMEESLTF 327
Query: 121 LKEMWVLGLELSASTFVSVVSGCSFRQGI----SMHCCVYKLGLLNNEIPLANSVMSMYA 176
EM G+ A TF S++ S + + +HC + + + + +I L ++++ Y
Sbjct: 328 FYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSI-SLDIFLTSALIDAYF 386
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K V+ A++IF + +V +T +I GY++ G ++ + + ++ ++P+ + ++
Sbjct: 387 KCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVS 446
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
++ + L L +H ++K G++N + ++ MY KCG + LA +F+ + ++
Sbjct: 447 ILPVIGILLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRD 506
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEE 356
+ W SMI AQ PS A+++F+++ + + + +++ LSACA L S S GK I
Sbjct: 507 IVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHG 566
Query: 357 YIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQ 416
+++ + L S+ +++LI M++KCG + A VF+ + +K++ W+++I HG
Sbjct: 567 FMIKHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEKNIVSWNSIIAACGNHGKLKD 626
Query: 417 ALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCL 476
+L LF++M G++PD + + I+S+C H G VD+G+ FF+SM ++GI+P EHY C+
Sbjct: 627 SLCLFHEMVEKSGIRPDQITFLEIISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEHYACV 686
Query: 477 VDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGST 536
VDL GRAGR A +T+ MP A VW LL AC H NVEL E A+ L+ L+P ++
Sbjct: 687 VDLFGRAGRLTEAYETVKSMPFPPDAGVWGTLLGACRLHKNVELAEVASSKLMDLDPSNS 746
Query: 537 GNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSV 596
G Y+L++N +A W+ R LM +R + K PG+S +EI+ +FV+GD +H S
Sbjct: 747 GYYVLISNAHANAREWESVTKVRSLMKEREVQKIPGYSWIEINKRTHLFVSGDVNHPESS 806
Query: 597 DIRKTLKELHIKLLEAGYIAE 617
I L L +L GYI +
Sbjct: 807 HIYSLLNSLLGELRLEGYIPQ 827
Score = 201 bits (511), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 140/524 (26%), Positives = 252/524 (48%), Gaps = 20/524 (3%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+I + NG + L+ Y ML GV + TFP ++KAC + + + V +G
Sbjct: 109 IISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGIDFLSDTVSSLG 168
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+ FV + LI Y + K+ D V + V WN +++ +++ D I
Sbjct: 169 MDCNEFVASSLIKAYLEYGKIDVPSKLFDR--VLQKDCVIWNVMLNGYAKCGALDSVIKG 226
Query: 121 LKEMWVLGLELSASTFVSVVSGCSFR----QGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
M + + +A TF V+S C+ + G+ +H V G ++ E + NS++SMY+
Sbjct: 227 FSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSG-VDFEGSIKNSLLSMYS 285
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K G+ ++A +F + V+W +I GYV G + E+ +M V PD + F +
Sbjct: 286 KCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSS 345
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
L+ ++ NL +H +++ + + L + L+ Y KC + +A+ +F
Sbjct: 346 LLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVD 405
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEE 356
V ++T+MI GY G +++ +F+ L+K + PNE TL + L L +L G+E+
Sbjct: 406 VVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRELHG 465
Query: 357 YIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQ 416
+I+ G ++ + ++I M++KCGR+N A E+FER+ +D+ W++MI A
Sbjct: 466 FIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSA 525
Query: 417 ALNLFYKMQHVEGLKPDAVVYTSILSACSH-----SGMVDDGLSFFKSMQSNFGIEPSIE 471
A+++F +M V G+ D V ++ LSAC++ G G S+ S+ E +
Sbjct: 526 AIDIFRQMG-VSGICYDCVSISAALSACANLPSESFGKAIHGFMIKHSLASDVYSEST-- 582
Query: 472 HYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKH 515
L+D+ + G A+ M E W +++AC H
Sbjct: 583 ----LIDMYAKCGNLKAAMNVFKTMK-EKNIVSWNSIIAACGNH 621
Score = 194 bits (492), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 128/498 (25%), Positives = 243/498 (48%), Gaps = 30/498 (6%)
Query: 35 LVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVR 94
L+L+AC+N N + GK+VH+ ++ D++ ++ MY+ C F K+ + +R
Sbjct: 40 LLLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLDLR 99
Query: 95 LRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGC----SFRQGIS 150
S+ WNSIIS+ R L ++A+ +M G+ STF +V C +F+
Sbjct: 100 RSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGIDF 159
Query: 151 MHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVG 210
+ V LG+ NE +A+S++ Y ++GK++ +FD + + V W ++ GY G
Sbjct: 160 LSDTVSSLGMDCNEF-VASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCG 218
Query: 211 NVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDN 270
++ + MR ++P+ V F ++ CA + L + +H L++ SG + E + N
Sbjct: 219 ALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKN 278
Query: 271 LLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRP 330
L+SMY+KCG + A ++F + W MI GY Q G E++ F ++ + V P
Sbjct: 279 SLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLP 338
Query: 331 NEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVF 390
+ T ++ L + ++ +L K+I YI+ + + + + ++LI + KC ++ A+ +F
Sbjct: 339 DAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIF 398
Query: 391 ERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACS----- 445
+ D+ V++AMI+GY +G+ +L +F + V+ + P+ + SIL
Sbjct: 399 SQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVK-ISPNEITLVSILPVIGILLAL 457
Query: 446 ------HSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVE 499
H ++ G + N G ++D+ + GR +LA + I E +
Sbjct: 458 KLGRELHGFIIKKGF----DNRCNIGCA--------VIDMYAKCGRMNLAYE-IFERLSK 504
Query: 500 VQAQVWAPLLSACMKHHN 517
W +++ C + N
Sbjct: 505 RDIVSWNSMITRCAQSDN 522
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 68/127 (53%), Gaps = 7/127 (5%)
Query: 324 LKTSVRPNEATLATTLS----ACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSK 379
L+ S R E T+ LS AC+ L +GK++ ++++N + + ++ M++
Sbjct: 23 LRNSSRFLEETIPRRLSLLLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAM 82
Query: 380 CGRINKAKEVFERVPDKDLAV--WSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVY 437
CG + ++F R+ + ++ W+++I+ + +G+ +QAL ++KM G+ PD +
Sbjct: 83 CGSFSDCGKMFYRLDLRRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCF-GVSPDVSTF 141
Query: 438 TSILSAC 444
++ AC
Sbjct: 142 PCLVKAC 148
>gi|15240444|ref|NP_198063.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635756|sp|O04659.2|PP398_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g27110
gi|332006268|gb|AED93651.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 691
Score = 348 bits (894), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 196/593 (33%), Positives = 321/593 (54%), Gaps = 10/593 (1%)
Query: 6 TNNGSFEETLSTYSSMLQTGVH-GNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQD 64
+ N F +TL + +L + +SFTFP V+KA + + G+ +H+ V+K G+ D
Sbjct: 82 SKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGALGREFLGRMIHTLVVKSGYVCD 141
Query: 65 AFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEM 124
V + L+ MY+K + F +S +V DEMP R V SWN++IS ++ ++A+ + M
Sbjct: 142 VVVASSLVGMYAKFNLFENSLQVFDEMPER--DVASWNTVISCFYQSGEAEKALELFGRM 199
Query: 125 WVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGK 180
G E ++ + +S CS +G +H K G +E + ++++ MY K
Sbjct: 200 ESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEY-VNSALVDMYGKCDC 258
Query: 181 VNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILG 240
+ AR +F ++ S+V+W ++I GYV G+ + N+M P ++++
Sbjct: 259 LEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMA 318
Query: 241 CAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLW 300
C++ NL +H +++S N + ++ L+ +Y KCG+ LA VF + W
Sbjct: 319 CSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAETVFSKTQKDVAESW 378
Query: 301 TSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVL 360
MI Y +G +AV ++ +++ V+P+ T + L AC++L +L KGK+I I
Sbjct: 379 NVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIHLSISE 438
Query: 361 NGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNL 420
+ LE++ + ++L+ M+SKCG +A +F +P KD+ W+ MI+ Y HG +AL
Sbjct: 439 SRLETDELLLSALLDMYSKCGNEKEAFRIFNSIPKKDVVSWTVMISAYGSHGQPREALYQ 498
Query: 421 FYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLL 480
F +MQ GLKPD V ++LSAC H+G++D+GL FF M+S +GIEP IEHY C++D+L
Sbjct: 499 FDEMQKF-GLKPDGVTLLAVLSACGHAGLIDEGLKFFSQMRSKYGIEPIIEHYSCMIDIL 557
Query: 481 GRAGRFDLALKTIHEMP-VEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNY 539
GRAGR A + I + P A++ + L SAC H LG+ A+ L+ P Y
Sbjct: 558 GRAGRLLEAYEIIQQTPETSDNAELLSTLFSACCLHLEHSLGDRIARLLVENYPDDASTY 617
Query: 540 ILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSH 592
+++ NL+ S W A R M + L K+PG S +E+ V F A DRSH
Sbjct: 618 MVLFNLYASGESWDAARRVRLKMKEMGLRKKPGCSWIEMSDKVCHFFAEDRSH 670
Score = 208 bits (530), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 143/486 (29%), Positives = 241/486 (49%), Gaps = 11/486 (2%)
Query: 36 VLKACAN-INSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVR 94
+L+ C N S+ K VH +L +G ++D + LI++Y C D S+R V + +R
Sbjct: 9 LLRECTNSTKSLRRIKLVHQRILTLGLRRDVVLCKSLINVYFTCKDHCSARHVFENFDIR 68
Query: 95 LRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSAS-TFVSVVS--GCSFRQ--GI 149
V WNS++S +S+ + + + V K + + + S TF +V+ G R+ G
Sbjct: 69 -SDVYIWNSLMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGALGREFLGR 127
Query: 150 SMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNV 209
+H V K G + + + +A+S++ MYAKF + +FDE+ E + SW T+I +
Sbjct: 128 MIHTLVVKSGYVCD-VVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQS 186
Query: 210 GNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLD 269
G +A L +M P+ V I C+++ L +H +K G+ ++ ++
Sbjct: 187 GEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYVN 246
Query: 270 NLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVR 329
+ LV MY KC LE+AR VF + KS+ W SMI GY G V + R++ R
Sbjct: 247 SALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTR 306
Query: 330 PNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEV 389
P++ TL + L AC+ +L GK I Y++ + + ++ V SLI ++ KCG N A+ V
Sbjct: 307 PSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAETV 366
Query: 390 FERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGM 449
F + W+ MI+ Y G +A+ ++ +M V G+KPD V +TS+L ACS
Sbjct: 367 FSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSV-GVKPDVVTFTSVLPACSQLAA 425
Query: 450 VDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLL 509
++ G S+ S +E L+D+ + G A + + +P + W ++
Sbjct: 426 LEKGKQIHLSI-SESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIP-KKDVVSWTVMI 483
Query: 510 SACMKH 515
SA H
Sbjct: 484 SAYGSH 489
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 90/365 (24%), Positives = 158/365 (43%), Gaps = 39/365 (10%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI+ G + + + M+ G + T +L AC+ ++ GK +H +V++
Sbjct: 280 MIKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSV 339
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
D +V LID+Y KC + + V + + SWN +IS++ +A+ V
Sbjct: 340 VNADIYVNCSLIDLYFKCGEANLAETVFSKTQKDVAE--SWNVMISSYISVGNWFKAVEV 397
Query: 121 LKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
+M +G++ TF SV+ CS +G +H + + L +E+ L ++++ MY+
Sbjct: 398 YDQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIHLSISESRLETDEL-LLSALLDMYS 456
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K G EA IF+ I + +VSWT +I Y + G EA ++M++ + PD V L
Sbjct: 457 KCGNEKEAFRIFNSIPKKDVVSWTVMISAYGSHGQPREALYQFDEMQKFGLKPDGVTLLA 516
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
++ C G + L S ++S Y E +++
Sbjct: 517 VLSACGHAGLIDEGLKFFS-QMRSKYGIEPIIEH-------------------------- 549
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEE 356
++ MI + G EA + ++ +TS N L+T SAC S G I
Sbjct: 550 ---YSCMIDILGRAGRLLEAYEIIQQTPETS--DNAELLSTLFSACCLHLEHSLGDRIAR 604
Query: 357 YIVLN 361
+V N
Sbjct: 605 LLVEN 609
>gi|357143056|ref|XP_003572787.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39350-like [Brachypodium distachyon]
Length = 594
Score = 348 bits (893), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 193/583 (33%), Positives = 322/583 (55%), Gaps = 15/583 (2%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
++R+ T G + E ++ YS M + TFP KAC + G+ VH L G
Sbjct: 13 LLRSYTGLGHYREAVALYSGMRSF----DHLTFPFAAKACGGLRLSRHGRAVHCRALAAG 68
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F D +VQ LI MY C D ++ V M + R+VVSWN++I+ + + A+ V
Sbjct: 69 FGDDTYVQNALISMYMGCGDVAAAEAVFCAM--QNRTVVSWNAVIAGCVKNDCAERALEV 126
Query: 121 LKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKL---GLLNNEIPLANSVMSMYAK 177
EM G E+ +T VSV+ C+ + +S+ V++L L + + N+++ MY K
Sbjct: 127 FGEMAGDGTEIDRATVVSVLPACAQAKNLSIGRAVHQLVEERGLADYAAVKNALIDMYGK 186
Query: 178 FGKVNEARSIFDEIG-ETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTP--DLVVF 234
+ AR +FD+ + +VSWT +IG YV +V EAF L ++M S P + V
Sbjct: 187 CRNLEGARKVFDDHKYDKDVVSWTVMIGAYVLNDHVEEAFALGHEMLMTSGAPWPNGVTM 246
Query: 235 LNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLE 294
L+ C+++ A MH++ ++ G ++ ++ L+ Y KC ++++ +
Sbjct: 247 AYLLSACSRLSGRH-AKCMHAMCIRLGLESDIIVETALMDAYAKCHNMKMMELTLENGSR 305
Query: 295 KSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEI 354
++ W + I GY +A+ L KR++ S RP+ AT+A+ L A AE + + I
Sbjct: 306 RTE-TWNATISGYTHNEQEKKAIELLKRMIAESARPDSATMASILPAYAESADVRQATNI 364
Query: 355 EEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMG 414
Y++ G + ++ T LI++++K G ++ + +F+ +P+KD+ W+ +I GY +HG
Sbjct: 365 HCYLLTLGFLRSTEITTGLINVYAKAGDLDVSWSLFDGLPEKDVVAWTTVIAGYGMHGQA 424
Query: 415 DQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYL 474
++ L+ +M + G+KP+ V + S+L ACSH GMVD+GL F+ M+ G+ P+ +HY
Sbjct: 425 QTSILLYNRMVQL-GVKPNTVTFASLLYACSHVGMVDEGLQLFEDMRGIHGVMPNADHYS 483
Query: 475 CLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPG 534
LVD++GRAGR + A + I +MP+E VW LL AC+ H NV+ GE AAK+L L P
Sbjct: 484 SLVDMVGRAGRIEEAYRLIEDMPLEPSTSVWGALLGACVLHKNVKFGEVAAKHLFELEPK 543
Query: 535 STGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVE 577
+TGN++L+ N++ +A W + R M ++ L+KE G S VE
Sbjct: 544 NTGNHVLLGNIYAAADRWSDVQDVRRRMAEKGLSKESGSSLVE 586
>gi|87241511|gb|ABD33369.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 609
Score = 348 bits (893), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 183/501 (36%), Positives = 293/501 (58%), Gaps = 7/501 (1%)
Query: 123 EMWVLGLELSASTFVSVVSGCSFRQGISM----HCCVYKLGLLNNEIPLANSVMSMYAKF 178
+M L + + TF V C+ + I M HC V+KLGL +N+ NS+++MY +
Sbjct: 107 QMKTLNISPNNFTFPFVFLACANLEEIRMARLAHCEVFKLGL-DNDHHTVNSMVTMYFRC 165
Query: 179 GKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMS-VTPDLVVFLNL 237
G+ AR +FDEI E +VSW +++ GY +G EA + ++R S PD + +++
Sbjct: 166 GENGVARKVFDEITEKDLVSWNSLLSGYAKLGFAREAVEVFGRLREESGFEPDEMSLVSV 225
Query: 238 ILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSV 297
+ C ++G+L L + +++ G + + L+SMY+KCG+L +RR+FD + +
Sbjct: 226 LGACGELGDLELGRWVEGFVVERGMKVNSYIGSALISMYSKCGELVSSRRIFDGMPSRDF 285
Query: 298 FLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEY 357
W + I YAQ G EA++LF + + V PN+ TL LSACA +G+L GK+++EY
Sbjct: 286 ITWNAAISAYAQNGMADEAISLFHSMKENGVDPNKVTLTAVLSACASIGALDLGKQMDEY 345
Query: 358 IVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQA 417
GL+ + V T+LI M++KCG + A+ VF +P K+ A W+AMI+ A HG +A
Sbjct: 346 ATHRGLQHDIFVATALIDMYAKCGSLESAQRVFNDMPRKNDASWNAMISALASHGKAKEA 405
Query: 418 LNLFYKMQHVEG-LKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCL 476
L+LF +M G +P+ + + S+LSAC H+G+VD+G F M + FG+ P IEHY C+
Sbjct: 406 LSLFERMSDEGGSARPNDITFVSLLSACVHAGLVDEGYRLFDMMSTLFGLVPKIEHYSCM 465
Query: 477 VDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGST 536
VDLL RAG A I +MP + L SAC + NV++GE + LL L+P ++
Sbjct: 466 VDLLSRAGHLYEAWDVIEKMPEKPDNVTLGALHSACQRKKNVDIGERVIQMLLELDPSNS 525
Query: 537 GNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSV 596
GNYI+ + ++ + MW +AA R LM + +TK PG S +E+ ++ F++GD S+
Sbjct: 526 GNYIISSKIYENLNMWDDAARMRALMRENGVTKTPGCSWIEVGNQLREFLSGDGLTLDSI 585
Query: 597 DIRKTLKELHIKLLEAGYIAE 617
D+R + L+ +L + GY+ +
Sbjct: 586 DVRNIIDLLYEELKKEGYVPK 606
Score = 199 bits (505), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 101/299 (33%), Positives = 177/299 (59%), Gaps = 4/299 (1%)
Query: 218 LCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYT 277
L +QM+ ++++P+ F + L CA + + +A H + K G +N+ N +V+MY
Sbjct: 104 LYHQMKTLNISPNNFTFPFVFLACANLEEIRMARLAHCEVFKLGLDNDHHTVNSMVTMYF 163
Query: 278 KCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTS-VRPNEATLA 336
+CG+ +AR+VFD + EK + W S++ GYA+LG+ EAV +F RL + S P+E +L
Sbjct: 164 RCGENGVARKVFDEITEKDLVSWNSLLSGYAKLGFAREAVEVFGRLREESGFEPDEMSLV 223
Query: 337 TTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDK 396
+ L AC ELG L G+ +E ++V G++ N + ++LI M+SKCG + ++ +F+ +P +
Sbjct: 224 SVLGACGELGDLELGRWVEGFVVERGMKVNSYIGSALISMYSKCGELVSSRRIFDGMPSR 283
Query: 397 DLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSF 456
D W+A I+ YA +GM D+A++LF+ M+ G+ P+ V T++LSAC+ G +D G
Sbjct: 284 DFITWNAAISAYAQNGMADEAISLFHSMKE-NGVDPNKVTLTAVLSACASIGALDLGKQ- 341
Query: 457 FKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKH 515
++ G++ I L+D+ + G + A + ++MP + A W ++SA H
Sbjct: 342 MDEYATHRGLQHDIFVATALIDMYAKCGSLESAQRVFNDMPRKNDAS-WNAMISALASH 399
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 121/405 (29%), Positives = 200/405 (49%), Gaps = 12/405 (2%)
Query: 1 MIRNSTNN-GSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKV 59
M+R +T + TL Y M + N+FTFP V ACAN+ I + H V K+
Sbjct: 87 MLRATTTTWHDYPLTLHLYHQMKTLNISPNNFTFPFVFLACANLEEIRMARLAHCEVFKL 146
Query: 60 GFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAIL 119
G D ++ MY +C + +RKV DE + + +VSWNS++S +++ EA+
Sbjct: 147 GLDNDHHTVNSMVTMYFRCGENGVARKVFDE--ITEKDLVSWNSLLSGYAKLGFAREAVE 204
Query: 120 VLKEMW-VLGLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSM 174
V + G E + VSV+ C G + V + G+ N + ++++SM
Sbjct: 205 VFGRLREESGFEPDEMSLVSVLGACGELGDLELGRWVEGFVVERGMKVNSY-IGSALISM 263
Query: 175 YAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVF 234
Y+K G++ +R IFD + ++W I Y G +EA L + M+ V P+ V
Sbjct: 264 YSKCGELVSSRRIFDGMPSRDFITWNAAISAYAQNGMADEAISLFHSMKENGVDPNKVTL 323
Query: 235 LNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLE 294
++ CA +G L L M G ++ + L+ MY KCG LE A+RVF+ +
Sbjct: 324 TAVLSACASIGALDLGKQMDEYATHRGLQHDIFVATALIDMYAKCGSLESAQRVFNDMPR 383
Query: 295 KSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKT--SVRPNEATLATTLSACAELGSLSKGK 352
K+ W +MI A G EA++LF+R+ S RPN+ T + LSAC G + +G
Sbjct: 384 KNDASWNAMISALASHGKAKEALSLFERMSDEGGSARPNDITFVSLLSACVHAGLVDEGY 443
Query: 353 EIEEYI-VLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDK 396
+ + + L GL + + ++ + S+ G + +A +V E++P+K
Sbjct: 444 RLFDMMSTLFGLVPKIEHYSCMVDLLSRAGHLYEAWDVIEKMPEK 488
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 76/142 (53%), Gaps = 1/142 (0%)
Query: 312 YPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQT 371
YP ++L+ ++ ++ PN T ACA L + + + GL+++
Sbjct: 98 YPL-TLHLYHQMKTLNISPNNFTFPFVFLACANLEEIRMARLAHCEVFKLGLDNDHHTVN 156
Query: 372 SLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLK 431
S++ M+ +CG A++VF+ + +KDL W+++++GYA G +A+ +F +++ G +
Sbjct: 157 SMVTMYFRCGENGVARKVFDEITEKDLVSWNSLLSGYAKLGFAREAVEVFGRLREESGFE 216
Query: 432 PDAVVYTSILSACSHSGMVDDG 453
PD + S+L AC G ++ G
Sbjct: 217 PDEMSLVSVLGACGELGDLELG 238
>gi|296088174|emb|CBI35666.3| unnamed protein product [Vitis vinifera]
Length = 762
Score = 348 bits (893), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 189/611 (30%), Positives = 326/611 (53%), Gaps = 8/611 (1%)
Query: 6 TNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDA 65
+ G +E M V ++ + +AC + S+ DG+ +H + +
Sbjct: 63 SKQGKLKEAHDFLKEMDDADVSVTPHSYQCLFEACGKLRSLADGRLIHDRLRRTVKNPSG 122
Query: 66 FVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMW 125
++ L+ MY C + +KV DEM ++++VSW +ISA+++ ++AI + +M
Sbjct: 123 SIENCLLRMYCDCGSCIDVQKVFDEM--LMKNLVSWVIVISAYAKNGELEKAIRLFSDMQ 180
Query: 126 VLGLELSASTFVSVVSGC---SFRQ-GISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKV 181
G+ +++ ++S++ C SF + G +H V + LN I + ++ +MY + G +
Sbjct: 181 ASGIRPNSAVYMSLLQSCLGPSFLELGKQIHSHVIR-AQLNANITVETAICNMYVRCGWL 239
Query: 182 NEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGC 241
A+ +FD + + V+WT ++ GY + A L +M V D VF ++ C
Sbjct: 240 EGAKLVFDGMDAQNAVTWTGLMVGYTQAKKLEVALELFARMAMEGVELDEFVFSIVLKVC 299
Query: 242 AQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWT 301
+ + + +HS ++K G +E + LV Y KCGD+E A R F + E + W+
Sbjct: 300 CGLEDWDMGRQIHSHIVKLGAESEVSVGTPLVDFYVKCGDIESAYRSFGRISEPNDVSWS 359
Query: 302 SMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLN 361
++I G++Q G + + +F L V N + ACA +L+ G + +
Sbjct: 360 ALISGFSQSGRLEDCIKIFTSLRSEGVVLNSFIYTSVFQACAAQANLNMGSQAHGDAIKR 419
Query: 362 GLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLF 421
GL S +++++ M+SKCGR++ A+ FE + + D W+A+I+GYA HG +AL F
Sbjct: 420 GLVSYLYGESAMVTMYSKCGRLDYARRAFESIDEPDAVAWTAIISGYAYHGNAAEALGFF 479
Query: 422 YKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLG 481
+MQ G++P+AV + ++L+ACSHSG+V + + SM ++G++P+I+HY C++D
Sbjct: 480 RRMQSY-GVRPNAVTFIAVLTACSHSGLVAEAKQYLGSMSRDYGVKPTIDHYDCMIDTYS 538
Query: 482 RAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYIL 541
RAG AL+ I+ MP E A W LL C H +++LG+ AA+NL L+PG T YIL
Sbjct: 539 RAGLLQEALELINRMPFEPDAMSWKSLLGGCWAHCDLKLGKIAAENLFRLDPGDTAGYIL 598
Query: 542 MANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKT 601
+ NL+++ G W+EA R LM +R L KE S + + G V FV GDR H + I
Sbjct: 599 LFNLYSAFGKWEEAGHVRKLMAERELKKEVSCSWISVKGQVHRFVVGDRHHPQTEAIYSK 658
Query: 602 LKELHIKLLEA 612
L+E ++++
Sbjct: 659 LEEFKCSVIDS 669
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 104/212 (49%), Gaps = 11/212 (5%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+I + +G E+ + ++S+ GV NSF + V +ACA ++ G + H +K G
Sbjct: 361 LISGFSQSGRLEDCIKIFTSLRSEGVVLNSFIYTSVFQACAAQANLNMGSQAHGDAIKRG 420
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+ ++ ++ MYSKC +R+ + + V+W +IIS ++ EA+
Sbjct: 421 LVSYLYGESAMVTMYSKCGRLDYARRAFE--SIDEPDAVAWTAIISGYAYHGNAAEALGF 478
Query: 121 LKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGLLNNE------IPLANSVMSM 174
+ M G+ +A TF++V++ CS G+ Y LG ++ + I + ++
Sbjct: 479 FRRMQSYGVRPNAVTFIAVLTACS-HSGLVAEAKQY-LGSMSRDYGVKPTIDHYDCMIDT 536
Query: 175 YAKFGKVNEARSIFDEIG-ETSIVSWTTIIGG 205
Y++ G + EA + + + E +SW +++GG
Sbjct: 537 YSRAGLLQEALELINRMPFEPDAMSWKSLLGG 568
>gi|357485423|ref|XP_003612999.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355514334|gb|AES95957.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 676
Score = 348 bits (893), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 206/586 (35%), Positives = 320/586 (54%), Gaps = 13/586 (2%)
Query: 42 NINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSW 101
N S+ K +H+H+LK G +F LID Y KCS +RK+ DEMP R +V+W
Sbjct: 13 NKKSLTTLKSLHTHILKSG-SLFSFFGHKLIDGYIKCSVITEARKLFDEMPNR--HIVTW 69
Query: 102 NSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYK 157
NS+IS+H EAI + M G+ A TF ++ S R+G H
Sbjct: 70 NSMISSHVSRGKTKEAIELYDNMLFEGVLPDAYTFSAIFKAFSEMGVSREGQKAHGLAVV 129
Query: 158 LGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFG 217
LG ++ +A ++ MYAKFGK+ +AR +FD + + +V +T +I GY G EA
Sbjct: 130 LGFEVSDGFVATGIVDMYAKFGKMKDARFVFDRVLDKDVVLFTALIVGYNQRGLDGEALE 189
Query: 218 LCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYT 277
+ M + P+ ++++ C +G+L +H L++KSG + L++MY+
Sbjct: 190 VFEDMVGSRIKPNEYTLASVLVSCGNLGDLVNGKLIHGLVVKSGLESVVASQTSLLTMYS 249
Query: 278 KCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLAT 337
KC +E + +VF+++ S WTS I G Q G A+++F+ +++ S+ PN T ++
Sbjct: 250 KCNMVEDSIKVFNSLAYASHVTWTSFIVGLVQNGREEIALSMFREMIRCSISPNHFTFSS 309
Query: 338 TLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKD 397
L AC+ L L G++I V G++ N+ V +LIH++ KCG + KA+ VFE + + D
Sbjct: 310 ILHACSSLAMLEAGEQIHAVTVKLGVDGNKYVDAALIHLYGKCGNVEKARSVFESLTELD 369
Query: 398 LAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFF 457
+ + MI YA +G G +AL LF +M+ + G KP+ V + SIL AC+++G+V++G F
Sbjct: 370 VVSINTMIYAYAQNGFGHEALELFERMKKL-GHKPNVVTFISILLACNNAGLVEEGCQIF 428
Query: 458 KSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHE--MPVEVQAQVWAPLLSACMKH 515
+++N IE + +HY C++DLLGRA RF+ A I E P +Q W LL+AC H
Sbjct: 429 SLIRNNHSIELTRDHYTCMIDLLGRAKRFEEAAMLIEEGKNPDVIQ---WRTLLNACKIH 485
Query: 516 HNVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQ 575
VE+ E K +L P G +IL+ N++ SAG W + D RL K P S
Sbjct: 486 GEVEMAEKFMKKMLDQAPRDGGTHILLTNIYASAGKWDNVIEMKSAGRDLRLKKTPAMSW 545
Query: 576 VEIDGSVQVFVAGDRSHHLSVDIRKTLKELHIKLLEAGYIAEADIV 621
V+ID V F+AGD SH + +I + L EL K++ GY + V
Sbjct: 546 VDIDREVHTFMAGDLSHPRAHEISEMLHELIEKVITLGYNPDTKFV 591
Score = 192 bits (488), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 125/430 (29%), Positives = 219/430 (50%), Gaps = 9/430 (2%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI + + G +E + Y +ML GV +++TF + KA + + +G++ H + +G
Sbjct: 72 MISSHVSRGKTKEAIELYDNMLFEGVLPDAYTFSAIFKAFSEMGVSREGQKAHGLAVVLG 131
Query: 61 FQ-QDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAIL 119
F+ D FV TG++DMY+K +R V D V + VV + ++I +++ L+ EA+
Sbjct: 132 FEVSDGFVATGIVDMYAKFGKMKDARFVFDR--VLDKDVVLFTALIVGYNQRGLDGEALE 189
Query: 120 VLKEMWVLGLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMY 175
V ++M ++ + T SV+ C G +H V K G L + + S+++MY
Sbjct: 190 VFEDMVGSRIKPNEYTLASVLVSCGNLGDLVNGKLIHGLVVKSG-LESVVASQTSLLTMY 248
Query: 176 AKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFL 235
+K V ++ +F+ + S V+WT+ I G V G A + +M R S++P+ F
Sbjct: 249 SKCNMVEDSIKVFNSLAYASHVTWTSFIVGLVQNGREEIALSMFREMIRCSISPNHFTFS 308
Query: 236 NLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEK 295
+++ C+ + L +H++ +K G + +D L+ +Y KCG++E AR VF+++ E
Sbjct: 309 SILHACSSLAMLEAGEQIHAVTVKLGVDGNKYVDAALIHLYGKCGNVEKARSVFESLTEL 368
Query: 296 SVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIE 355
V +MI YAQ G+ EA+ LF+R+ K +PN T + L AC G + +G +I
Sbjct: 369 DVVSINTMIYAYAQNGFGHEALELFERMKKLGHKPNVVTFISILLACNNAGLVEEGCQIF 428
Query: 356 EYIVLN-GLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMG 414
I N +E R T +I + + R +A + E + D+ W ++N IHG
Sbjct: 429 SLIRNNHSIELTRDHYTCMIDLLGRAKRFEEAAMLIEEGKNPDVIQWRTLLNACKIHGEV 488
Query: 415 DQALNLFYKM 424
+ A KM
Sbjct: 489 EMAEKFMKKM 498
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 93/373 (24%), Positives = 175/373 (46%), Gaps = 18/373 (4%)
Query: 13 ETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLI 72
E L + M+ + + N +T VL +C N+ + +GK +H V+K G + QT L+
Sbjct: 186 EALEVFEDMVGSRIKPNEYTLASVLVSCGNLGDLVNGKLIHGLVVKSGLESVVASQTSLL 245
Query: 73 DMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELS 132
MYSKC+ S KV + + S V+W S I + + A+ + +EM + +
Sbjct: 246 TMYSKCNMVEDSIKVFNSLA--YASHVTWTSFIVGLVQNGREEIALSMFREMIRCSISPN 303
Query: 133 ASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIF 188
TF S++ CS G +H KLG+ N+ A +++ +Y K G V +ARS+F
Sbjct: 304 HFTFSSILHACSSLAMLEAGEQIHAVTVKLGVDGNKYVDA-ALIHLYGKCGNVEKARSVF 362
Query: 189 DEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLF 248
+ + E +VS T+I Y G +EA L +M+++ P++V F++++L C G +
Sbjct: 363 ESLTELDVVSINTMIYAYAQNGFGHEALELFERMKKLGHKPNVVTFISILLACNNAGLVE 422
Query: 249 LALSMHSLLLKSGYNNEDPLDNL--LVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGG 306
+ S L+++ ++ E D+ ++ + + E A + + V W +++
Sbjct: 423 EGCQIFS-LIRNNHSIELTRDHYTCMIDLLGRAKRFEEAAMLIEEGKNPDVIQWRTLLNA 481
Query: 307 YAQLGYPSEAVNLFKRLLKTSVRPNEA-TLATTLSACA-------ELGSLSKGKEIEEYI 358
G A K++L + R L T + A A E+ S + +++
Sbjct: 482 CKIHGEVEMAEKFMKKMLDQAPRDGGTHILLTNIYASAGKWDNVIEMKSAGRDLRLKKTP 541
Query: 359 VLNGLESNRQVQT 371
++ ++ +R+V T
Sbjct: 542 AMSWVDIDREVHT 554
>gi|125552577|gb|EAY98286.1| hypothetical protein OsI_20194 [Oryza sativa Indica Group]
Length = 874
Score = 348 bits (893), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 198/612 (32%), Positives = 336/612 (54%), Gaps = 22/612 (3%)
Query: 13 ETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLI 72
E ++ + M G+ N FTF VL A A+ ++ G+RVH+ +K G + FV L+
Sbjct: 184 EVMALFFRMRAEGIWPNPFTFASVLSAVASQGALDLGQRVHAQSVKFGCRSSVFVCNSLM 243
Query: 73 DMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELS 132
+MY+KC ++ V + M R +VSWN++++ EA+ + E +++
Sbjct: 244 NMYAKCGLVEDAKSVFNWMETR--DMVSWNTLMAGLQLNECELEALQLFHESRATMGKMT 301
Query: 133 ASTFVSVVSGCSFRQGISM----HCCVYKLGLLNNEIPLANSVMSM----YAKFGKVNEA 184
ST+ +V+ C+ + +++ H CV K G L +VM+ Y+K G++ +A
Sbjct: 302 QSTYATVIKLCANLKQLALARQLHSCVLKHGF-----HLTGNVMTALADAYSKCGELADA 356
Query: 185 RSIFD-EIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQ 243
+IF G ++VSWT II G + G++ A L ++MR V P+ + ++
Sbjct: 357 LNIFSMTTGSRNVVSWTAIISGCIQNGDIPLAVVLFSRMREDRVMPNEFTYSAMLKASLS 416
Query: 244 VGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSM 303
+ L +H+ ++K+ Y + + L++ Y+K G E A +F + +K V W++M
Sbjct: 417 I----LPPQIHAQVIKTNYQHIPSVGTALLASYSKFGSTEDALSIFKMIEQKDVVAWSAM 472
Query: 304 IGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACA-ELGSLSKGKEIEEYIVLNG 362
+ +AQ G A LF ++ ++PNE T+++ + ACA + +G++ +
Sbjct: 473 LSCHAQAGDCEGATYLFNKMAIQGIKPNEFTISSVIDACACPSAGVDQGRQFHAISIKYR 532
Query: 363 LESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFY 422
V ++L+ M+S+ G I+ A+ VFER D+DL W++MI+GYA HG +A+ F
Sbjct: 533 YHDAICVSSALVSMYSRKGNIDSAQIVFERQTDRDLVSWNSMISGYAQHGYSMKAIETFR 592
Query: 423 KMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGR 482
+M+ G++ D V + +++ C+H+G+V +G +F SM + I P++EHY C+VDL R
Sbjct: 593 QME-ASGIQMDGVTFLAVIMGCTHNGLVVEGQQYFDSMVRDHKINPTMEHYACMVDLYSR 651
Query: 483 AGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILM 542
AG+ D + I +MP A VW LL AC H NVELG+++A LL+L P + Y+L+
Sbjct: 652 AGKLDETMSLIRDMPFPAGAMVWRTLLGACRVHKNVELGKFSADKLLSLEPHDSSTYVLL 711
Query: 543 ANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTL 602
+N++ +AG WKE R LMD R++ KE G S ++I V F+A D+SH +S I K L
Sbjct: 712 SNIYAAAGKWKERDEVRKLMDYRKVKKEAGCSWIQIKNKVHSFIAFDKSHPMSDQIYKKL 771
Query: 603 KELHIKLLEAGY 614
K + +L + GY
Sbjct: 772 KVIITRLKQDGY 783
Score = 186 bits (473), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 149/517 (28%), Positives = 248/517 (47%), Gaps = 19/517 (3%)
Query: 7 NNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQ-DA 65
G E L +S + GV +S T VLKAC ++ G+++H +K G + +
Sbjct: 76 RRGMVPEVLDQFSVARRGGVLVDSATLSCVLKACRSVPDRVLGEQLHCLCVKCGHDRGEV 135
Query: 66 FVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMW 125
T L+DMY KC +V + MP ++VV+W S+++ + A ++ E + + M
Sbjct: 136 SAGTSLVDMYMKCGSVCEGIEVFEGMPK--KNVVTWTSLLTGCAHAQMHSEVMALFFRMR 193
Query: 126 VLGLELSASTFVSVVSGCSFRQGISM----HCCVYKLGLLNNEIPLANSVMSMYAKFGKV 181
G+ + TF SV+S + + + + H K G + + + NS+M+MYAK G V
Sbjct: 194 AEGIWPNPFTFASVLSAVASQGALDLGQRVHAQSVKFG-CRSSVFVCNSLMNMYAKCGLV 252
Query: 182 NEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGC 241
+A+S+F+ + +VSW T++ G EA L ++ R + +I C
Sbjct: 253 EDAKSVFNWMETRDMVSWNTLMAGLQLNECELEALQLFHESRATMGKMTQSTYATVIKLC 312
Query: 242 AQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVL-EKSVFLW 300
A + L LA +HS +LK G++ + L Y+KCG+L A +F ++V W
Sbjct: 313 ANLKQLALARQLHSCVLKHGFHLTGNVMTALADAYSKCGELADALNIFSMTTGSRNVVSW 372
Query: 301 TSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLS-KGKEIEEYIV 359
T++I G Q G AV LF R+ + V PNE T + L A SLS +I ++
Sbjct: 373 TAIISGCIQNGDIPLAVVLFSRMREDRVMPNEFTYSAMLKA-----SLSILPPQIHAQVI 427
Query: 360 LNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALN 419
+ V T+L+ +SK G A +F+ + KD+ WSAM++ +A G + A
Sbjct: 428 KTNYQHIPSVGTALLASYSKFGSTEDALSIFKMIEQKDVVAWSAMLSCHAQAGDCEGATY 487
Query: 420 LFYKMQHVEGLKPDAVVYTSILSACS-HSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVD 478
LF KM ++G+KP+ +S++ AC+ S VD G F ++ + +I LV
Sbjct: 488 LFNKMA-IQGIKPNEFTISSVIDACACPSAGVDQGRQ-FHAISIKYRYHDAICVSSALVS 545
Query: 479 LLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKH 515
+ R G D A + + E + W ++S +H
Sbjct: 546 MYSRKGNIDSA-QIVFERQTDRDLVSWNSMISGYAQH 581
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 94/369 (25%), Positives = 178/369 (48%), Gaps = 7/369 (1%)
Query: 80 DFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSV 139
D +R LDE+P R + V N ++ ++R + E + G+ + ++T V
Sbjct: 47 DPPGARYPLDEIP-RRDAAVGANRVLFDYARRGMVPEVLDQFSVARRGGVLVDSATLSCV 105
Query: 140 VSGCSFRQ----GISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETS 195
+ C G +HC K G E+ S++ MY K G V E +F+ + + +
Sbjct: 106 LKACRSVPDRVLGEQLHCLCVKCGHDRGEVSAGTSLVDMYMKCGSVCEGIEVFEGMPKKN 165
Query: 196 IVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHS 255
+V+WT+++ G + +E L +MR + P+ F +++ A G L L +H+
Sbjct: 166 VVTWTSLLTGCAHAQMHSEVMALFFRMRAEGIWPNPFTFASVLSAVASQGALDLGQRVHA 225
Query: 256 LLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSE 315
+K G + + N L++MY KCG +E A+ VF+ + + + W +++ G E
Sbjct: 226 QSVKFGCRSSVFVCNSLMNMYAKCGLVEDAKSVFNWMETRDMVSWNTLMAGLQLNECELE 285
Query: 316 AVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIH 375
A+ LF T + ++T AT + CA L L+ +++ ++ +G V T+L
Sbjct: 286 ALQLFHESRATMGKMTQSTYATVIKLCANLKQLALARQLHSCVLKHGFHLTGNVMTALAD 345
Query: 376 MFSKCGRINKAKEVFERVP-DKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDA 434
+SKCG + A +F +++ W+A+I+G +G A+ LF +M+ + + P+
Sbjct: 346 AYSKCGELADALNIFSMTTGSRNVVSWTAIISGCIQNGDIPLAVVLFSRMRE-DRVMPNE 404
Query: 435 VVYTSILSA 443
Y+++L A
Sbjct: 405 FTYSAMLKA 413
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 78/316 (24%), Positives = 148/316 (46%), Gaps = 20/316 (6%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+I NG + +S M + V N FT+ +LKA +I ++H+ V+K
Sbjct: 375 IISGCIQNGDIPLAVVLFSRMREDRVMPNEFTYSAMLKASLSILP----PQIHAQVIKTN 430
Query: 61 FQQDAFVQTGLIDMYSK---CSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEA 117
+Q V T L+ YSK D +S K++++ + VV+W++++S H++A + A
Sbjct: 431 YQHIPSVGTALLASYSKFGSTEDALSIFKMIEQ-----KDVVAWSAMLSCHAQAGDCEGA 485
Query: 118 ILVLKEMWVLGLELSASTFVSVVSGCS-----FRQGISMHCCVYKLGLLNNEIPLANSVM 172
+ +M + G++ + T SV+ C+ QG H K ++ I ++++++
Sbjct: 486 TYLFNKMAIQGIKPNEFTISSVIDACACPSAGVDQGRQFHAISIKY-RYHDAICVSSALV 544
Query: 173 SMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLV 232
SMY++ G ++ A+ +F+ + +VSW ++I GY G +A QM + D V
Sbjct: 545 SMYSRKGNIDSAQIVFERQTDRDLVSWNSMISGYAQHGYSMKAIETFRQMEASGIQMDGV 604
Query: 233 VFLNLILGCAQVGNLFLALS-MHSLLLKSGYNNEDPLDNLLVSMYTKCGDL-ELARRVFD 290
FL +I+GC G + S++ N +V +Y++ G L E + D
Sbjct: 605 TFLAVIMGCTHNGLVVEGQQYFDSMVRDHKINPTMEHYACMVDLYSRAGKLDETMSLIRD 664
Query: 291 AVLEKSVFLWTSMIGG 306
+W +++G
Sbjct: 665 MPFPAGAMVWRTLLGA 680
>gi|224091973|ref|XP_002309422.1| predicted protein [Populus trichocarpa]
gi|222855398|gb|EEE92945.1| predicted protein [Populus trichocarpa]
Length = 582
Score = 348 bits (892), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 182/484 (37%), Positives = 279/484 (57%), Gaps = 8/484 (1%)
Query: 128 GLELSASTFVSVVSGCSFRQ----GISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNE 183
G +A TF + C+ G +HC V+K G L E + S++SMY K ++
Sbjct: 5 GASPNAFTFPFAIKSCAALSLPITGKQLHCHVFKTGCLL-EPFVQTSLISMYGKCSLIDN 63
Query: 184 ARSIFDEIGETS--IVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGC 241
AR +FDE ++ V + +++ GY V + L +MR + V + V L L+ C
Sbjct: 64 ARKLFDENPQSRKLTVCYNSLLSGYALNSRVKDVVVLFCEMRELGVEINGVTMLGLVQPC 123
Query: 242 AQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWT 301
GNL L + +H +K G + + + N L++MY K G+++ R++FD + K + W
Sbjct: 124 GIPGNLGLGMCVHGFCVKFGLDMDSSVGNCLLTMYVKSGEIDCGRKLFDEMPRKGLITWN 183
Query: 302 SMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLN 361
+MI GYAQ G + + L+K + P+ TL LS+CA LG+LS GKE+E +
Sbjct: 184 AMINGYAQNGLANNVLELYKEMESKGFCPDPLTLVGVLSSCAHLGALSVGKEVERKMEGF 243
Query: 362 GLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLF 421
G SN + +L++M+++CG + KA+++F+ +P K + W+A+I GY +HG G+ A+ LF
Sbjct: 244 GFSSNPFLNNALVNMYARCGNLKKARDIFDGMPVKSVVSWTAIIGGYGMHGQGEVAVGLF 303
Query: 422 YKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLG 481
+M G+KPD + S+LSACSH+G+ + GL +F M+ +G+ P EHY C+VDLLG
Sbjct: 304 DEMIR-GGIKPDGTAFVSVLSACSHAGLTNKGLDYFGVMERKYGLRPGAEHYSCMVDLLG 362
Query: 482 RAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYIL 541
RAGR + A + I M V +W LL AC H NVEL E A + ++ L P +TG Y+L
Sbjct: 363 RAGRLNEARELIESMQVRADGALWGALLGACKIHRNVELAELAFEQVIELEPTNTGYYVL 422
Query: 542 MANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKT 601
++N++T AG + R LM R+L K+PG S VE G V +F AGDR+H + +I K
Sbjct: 423 LSNVYTEAGNLEGILRVRMLMRKRKLKKDPGCSYVEFKGRVHLFFAGDRNHPQTNEIYKK 482
Query: 602 LKEL 605
L EL
Sbjct: 483 LNEL 486
Score = 234 bits (598), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 133/430 (30%), Positives = 232/430 (53%), Gaps = 14/430 (3%)
Query: 21 MLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSD 80
ML++G N+FTFP +K+CA ++ GK++H HV K G + FVQT LI MY KCS
Sbjct: 1 MLRSGASPNAFTFPFAIKSCAALSLPITGKQLHCHVFKTGCLLEPFVQTSLISMYGKCSL 60
Query: 81 FVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVV 140
++RK+ DE P + V +NS++S ++ + +++ EM LG+E++ T + +V
Sbjct: 61 IDNARKLFDENPQSRKLTVCYNSLLSGYALNSRVKDVVVLFCEMRELGVEINGVTMLGLV 120
Query: 141 SGCSFRQGISMHCCVY----KLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSI 196
C + + CV+ K G L+ + + N +++MY K G+++ R +FDE+ +
Sbjct: 121 QPCGIPGNLGLGMCVHGFCVKFG-LDMDSSVGNCLLTMYVKSGEIDCGRKLFDEMPRKGL 179
Query: 197 VSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSL 256
++W +I GY G N L +M PD + + ++ CA +G L + +
Sbjct: 180 ITWNAMINGYAQNGLANNVLELYKEMESKGFCPDPLTLVGVLSSCAHLGALSVGKEVERK 239
Query: 257 LLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEA 316
+ G+++ L+N LV+MY +CG+L+ AR +FD + KSV WT++IGGY G A
Sbjct: 240 MEGFGFSSNPFLNNALVNMYARCGNLKKARDIFDGMPVKSVVSWTAIIGGYGMHGQGEVA 299
Query: 317 VNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLN---GLESNRQVQTSL 373
V LF +++ ++P+ + LSAC+ G +KG ++ + V+ GL + + +
Sbjct: 300 VGLFDEMIRGGIKPDGTAFVSVLSACSHAGLTNKG--LDYFGVMERKYGLRPGAEHYSCM 357
Query: 374 IHMFSKCGRINKAKEVFERVPDK-DLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKP 432
+ + + GR+N+A+E+ E + + D A+W A++ IH + A F + V L+P
Sbjct: 358 VDLLGRAGRLNEARELIESMQVRADGALWGALLGACKIHRNVELAELAF---EQVIELEP 414
Query: 433 DAVVYTSILS 442
Y +LS
Sbjct: 415 TNTGYYVLLS 424
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 84/304 (27%), Positives = 149/304 (49%), Gaps = 9/304 (2%)
Query: 8 NGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFV 67
N ++ + + M + GV N T +++ C ++ G VH +K G D+ V
Sbjct: 91 NSRVKDVVVLFCEMRELGVEINGVTMLGLVQPCGIPGNLGLGMCVHGFCVKFGLDMDSSV 150
Query: 68 QTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVL 127
L+ MY K + RK+ DEMP + +++WN++I+ +++ L + + + KEM
Sbjct: 151 GNCLLTMYVKSGEIDCGRKLFDEMP--RKGLITWNAMINGYAQNGLANNVLELYKEMESK 208
Query: 128 GLELSASTFVSVVSGCSFRQGISMHCCVYK----LGLLNNEIPLANSVMSMYAKFGKVNE 183
G T V V+S C+ +S+ V + G +N L N++++MYA+ G + +
Sbjct: 209 GFCPDPLTLVGVLSSCAHLGALSVGKEVERKMEGFGFSSNPF-LNNALVNMYARCGNLKK 267
Query: 184 ARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQ 243
AR IFD + S+VSWT IIGGY G A GL ++M R + PD F++++ C+
Sbjct: 268 ARDIFDGMPVKSVVSWTAIIGGYGMHGQGEVAVGLFDEMIRGGIKPDGTAFVSVLSACSH 327
Query: 244 VGNLFLALSMHSLL-LKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAV-LEKSVFLWT 301
G L ++ K G + +V + + G L AR + +++ + LW
Sbjct: 328 AGLTNKGLDYFGVMERKYGLRPGAEHYSCMVDLLGRAGRLNEARELIESMQVRADGALWG 387
Query: 302 SMIG 305
+++G
Sbjct: 388 ALLG 391
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 96/197 (48%), Gaps = 10/197 (5%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI NG L Y M G + T VL +CA++ ++ GK V + G
Sbjct: 185 MINGYAQNGLANNVLELYKEMESKGFCPDPLTLVGVLSSCAHLGALSVGKEVERKMEGFG 244
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F + F+ L++MY++C + +R + D MPV +SVVSW +II + + A+ +
Sbjct: 245 FSSNPFLNNALVNMYARCGNLKKARDIFDGMPV--KSVVSWTAIIGGYGMHGQGEVAVGL 302
Query: 121 LKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGLLNNEIPLA------NSVMSM 174
EM G++ + FVSV+S CS G++ Y G++ + L + ++ +
Sbjct: 303 FDEMIRGGIKPDGTAFVSVLSACS-HAGLTNKGLDY-FGVMERKYGLRPGAEHYSCMVDL 360
Query: 175 YAKFGKVNEARSIFDEI 191
+ G++NEAR + + +
Sbjct: 361 LGRAGRLNEARELIESM 377
>gi|224145066|ref|XP_002325515.1| predicted protein [Populus trichocarpa]
gi|222862390|gb|EEE99896.1| predicted protein [Populus trichocarpa]
Length = 683
Score = 348 bits (892), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 200/622 (32%), Positives = 329/622 (52%), Gaps = 45/622 (7%)
Query: 36 VLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRL 95
+L +C N+ S+ GK++H+H + +GF+ + L+ YS S + + + +
Sbjct: 47 LLYSCTNLKSLPQGKQLHAHTISLGFENHLVLVPKLVTFYSSFSLLADAHTI--TVNSDI 104
Query: 96 RSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCSFRQ----GISM 151
+ + WN +IS++ L+ EA+ +EM G+ T+ SV+ C + G +
Sbjct: 105 VNPLPWNLLISSYVNNGLHGEALSAYREMVHKGVRPDNFTYPSVLKACGEKLDLDFGREV 164
Query: 152 HCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEI-------------------- 191
H + + + NS++SMY KFG+++ AR +F+++
Sbjct: 165 HESINAAYGHRWNLYVHNSLVSMYGKFGELDAARRLFNQMPERDAVSWNGIISNYASRGL 224
Query: 192 ---------------GETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
E +I++W TI GG V N A L +QMRR + D V +
Sbjct: 225 WKEAFELFEEMRLAGAEVNIITWNTIAGGCVQTRNFKGALELLSQMRRCDIDLDPVAMII 284
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
+ C+ +G + L +H+ ++S ++ D + N L++MY++C DL A +F ++ KS
Sbjct: 285 GLGACSHIGAIKLGTVIHASAIRSCFDGFDNVRNALITMYSRCKDLRHADILFKSIKTKS 344
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEE 356
+ W SM+ GY + EA LF+ +L + + PN T+A+ L CA + +L +GKE
Sbjct: 345 LTTWNSMLSGYTHMDRSEEASFLFREMLFSGIEPNYVTIASILPHCARVANLQQGKEFHC 404
Query: 357 YIVLN-GLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGD 415
YI+ G E + SL+ M+++ G++ AK VF+ + +D ++++I GY I G G
Sbjct: 405 YIMRREGFEDYLLLWNSLVEMYARSGKVLSAKRVFDSLRRRDKVTYTSLIAGYGIQGEGK 464
Query: 416 QALNLFYKM-QHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYL 474
AL LF +M +H +KPD V ++LSACSHSG+V +G F+ M + +GI P++EH+
Sbjct: 465 TALKLFDEMIKH--RIKPDQVTMVAVLSACSHSGLVTEGNVLFEKMSTLYGIVPAVEHFS 522
Query: 475 CLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPG 534
C+VDL GRAG + A K I MP +WA L+ AC H N E+GE+AA+ LL + P
Sbjct: 523 CMVDLFGRAGLLNKAKKVITSMPYRPTTAMWATLVGACRIHGNTEIGEWAAEKLLEMKPE 582
Query: 535 STGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHL 594
+ G Y+L+AN+ +AG W + A R M D + K PG + V++ FV GD S H
Sbjct: 583 NPGYYVLIANMHAAAGRWSKLAEVRTYMRDLGVRKAPGCTWVDVGSGFSPFVVGDTSKHN 642
Query: 595 SVDIRKTLKELHIKLLEAGYIA 616
S D+ + L+ L + +AGY+A
Sbjct: 643 SNDLYELLEGLTDLMKDAGYVA 664
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 123/454 (27%), Positives = 224/454 (49%), Gaps = 44/454 (9%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHV-LKV 59
+I + NNG E LS Y M+ GV ++FT+P VLKAC + G+ VH +
Sbjct: 113 LISSYVNNGLHGEALSAYREMVHKGVRPDNFTYPSVLKACGEKLDLDFGREVHESINAAY 172
Query: 60 GFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAIL 119
G + + +V L+ MY K + ++R++ ++MP R VSWN IIS ++ L EA
Sbjct: 173 GHRWNLYVHNSLVSMYGKFGELDAARRLFNQMPE--RDAVSWNGIISNYASRGLWKEAFE 230
Query: 120 VLKEMWVLGLELSASTFVSVVSGC----SFRQGISM------------------------ 151
+ +EM + G E++ T+ ++ GC +F+ + +
Sbjct: 231 LFEEMRLAGAEVNIITWNTIAGGCVQTRNFKGALELLSQMRRCDIDLDPVAMIIGLGACS 290
Query: 152 HCCVYKLGLLNNEIPL----------ANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTT 201
H KLG + + + N++++MY++ + A +F I S+ +W +
Sbjct: 291 HIGAIKLGTVIHASAIRSCFDGFDNVRNALITMYSRCKDLRHADILFKSIKTKSLTTWNS 350
Query: 202 IIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLL-KS 260
++ GY ++ EA L +M + P+ V +++ CA+V NL H ++ +
Sbjct: 351 MLSGYTHMDRSEEASFLFREMLFSGIEPNYVTIASILPHCARVANLQQGKEFHCYIMRRE 410
Query: 261 GYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLF 320
G+ + L N LV MY + G + A+RVFD++ + +TS+I GY G A+ LF
Sbjct: 411 GFEDYLLLWNSLVEMYARSGKVLSAKRVFDSLRRRDKVTYTSLIAGYGIQGEGKTALKLF 470
Query: 321 KRLLKTSVRPNEATLATTLSACAELGSLSKGKEI-EEYIVLNGLESNRQVQTSLIHMFSK 379
++K ++P++ T+ LSAC+ G +++G + E+ L G+ + + ++ +F +
Sbjct: 471 DEMIKHRIKPDQVTMVAVLSACSHSGLVTEGNVLFEKMSTLYGIVPAVEHFSCMVDLFGR 530
Query: 380 CGRINKAKEVFERVPDKD-LAVWSAMINGYAIHG 412
G +NKAK+V +P + A+W+ ++ IHG
Sbjct: 531 AGLLNKAKKVITSMPYRPTTAMWATLVGACRIHG 564
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 102/419 (24%), Positives = 187/419 (44%), Gaps = 49/419 (11%)
Query: 10 SFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQT 69
+F+ L S M + + + + L AC++I +I G +H+ ++ F V+
Sbjct: 259 NFKGALELLSQMRRCDIDLDPVAMIIGLGACSHIGAIKLGTVIHASAIRSCFDGFDNVRN 318
Query: 70 GLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGL 129
LI MYS+C D + + ++ +S+ +WNS++S ++ ++EA + +EM G+
Sbjct: 319 ALITMYSRCKDLRHADILFKS--IKTKSLTTWNSMLSGYTHMDRSEEASFLFREMLFSGI 376
Query: 130 ELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEAR 185
E + T S++ C+ +QG HC + + + + L NS++ MYA+ GKV A+
Sbjct: 377 EPNYVTIASILPHCARVANLQQGKEFHCYIMRREGFEDYLLLWNSLVEMYARSGKVLSAK 436
Query: 186 SIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVG 245
+FD + V++T++I GY G A L ++M + + PD V + ++ C+
Sbjct: 437 RVFDSLRRRDKVTYTSLIAGYGIQGEGKTALKLFDEMIKHRIKPDQVTMVAVLSACS--- 493
Query: 246 NLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIG 305
HS L+ G + L M T G + +V ++ M+
Sbjct: 494 --------HSGLVTEG-------NVLFEKMSTLYG------------IVPAVEHFSCMVD 526
Query: 306 GYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLES 365
+ + G ++A K + RP A AT + AC G+ G+ E + L
Sbjct: 527 LFGRAGLLNKAK---KVITSMPYRPTTAMWATLVGACRIHGNTEIGEWAAEKL-LEMKPE 582
Query: 366 NRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAV-------WSAMINGYAIHGMGDQA 417
N + +M + GR +K EV R +DL V W + +G++ +GD +
Sbjct: 583 NPGYYVLIANMHAAAGRWSKLAEV--RTYMRDLGVRKAPGCTWVDVGSGFSPFVVGDTS 639
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 90/177 (50%), Gaps = 2/177 (1%)
Query: 334 TLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERV 393
++++ L +C L SL +GK++ + + G E++ + L+ +S + A +
Sbjct: 43 SISSLLYSCTNLKSLPQGKQLHAHTISLGFENHLVLVPKLVTFYSSFSLLADAHTITVNS 102
Query: 394 PDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDG 453
+ W+ +I+ Y +G+ +AL+ + +M H +G++PD Y S+L AC +D G
Sbjct: 103 DIVNPLPWNLLISSYVNNGLHGEALSAYREMVH-KGVRPDNFTYPSVLKACGEKLDLDFG 161
Query: 454 LSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLS 510
+S+ + +G ++ + LV + G+ G D A + ++MP E A W ++S
Sbjct: 162 REVHESINAAYGHRWNLYVHNSLVSMYGKFGELDAARRLFNQMP-ERDAVSWNGIIS 217
>gi|6016735|gb|AAF01561.1|AC009325_31 hypothetical protein [Arabidopsis thaliana]
Length = 641
Score = 348 bits (892), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 200/619 (32%), Positives = 318/619 (51%), Gaps = 12/619 (1%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLK-V 59
++++ + +EE L +S M + ++FT P+ LKAC + + G+ +H V K V
Sbjct: 12 LLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKACGELREVNYGEMIHGFVKKDV 71
Query: 60 GFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAIL 119
D +V + LI MY KC + + ++ DE+ +V+W+S++S + +A+
Sbjct: 72 TLGSDLYVGSSLIYMYIKCGRMIEALRMFDEL--EKPDIVTWSSMVSGFEKNGSPYQAVE 129
Query: 120 VLKEMWVLGLELSAS--TFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMS 173
+ M V+ +++ T +++VS C+ R G +H V + G +N++ L NS+++
Sbjct: 130 FFRRM-VMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIRRGF-SNDLSLVNSLLN 187
Query: 174 MYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVV 233
YAK EA ++F I E ++SW+T+I YV G EA + N M P++
Sbjct: 188 CYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLVFNDMMDDGTEPNVAT 247
Query: 234 FLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVL 293
L ++ CA +L H L ++ G E + LV MY KC E A VF +
Sbjct: 248 VLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAVFSRIP 307
Query: 294 EKSVFLWTSMIGGYAQLGYPSEAVNLFK-RLLKTSVRPNEATLATTLSACAELGSLSKGK 352
K V W ++I G+ G ++ F LL+ + RP+ + L +C+ELG L + K
Sbjct: 308 RKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMVKVLGSCSELGFLEQAK 367
Query: 353 EIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHG 412
Y++ G +SN + SL+ ++S+CG + A +VF + KD VW+++I GY IHG
Sbjct: 368 CFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGIALKDTVVWTSLITGYGIHG 427
Query: 413 MGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEH 472
G +AL F M +KP+ V + SILSACSH+G++ +GL FK M +++ + P++EH
Sbjct: 428 KGTKALETFNHMVKSSEVKPNEVTFLSILSACSHAGLIHEGLRIFKLMVNDYRLAPNLEH 487
Query: 473 YLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLN 532
Y LVDLLGR G D A++ MP Q+ LL AC H N E+ E AK L L
Sbjct: 488 YAVLVDLLGRVGDLDTAIEITKRMPFSPTPQILGTLLGACRIHQNGEMAETVAKKLFELE 547
Query: 533 PGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSH 592
G Y+LM+N++ G W+ R + R + K S +EI V FVA D H
Sbjct: 548 SNHAGYYMLMSNVYGVKGEWENVEKLRNSVKQRGIKKGLAESLIEIRRKVHRFVADDELH 607
Query: 593 HLSVDIRKTLKELHIKLLE 611
+ LKEL + + E
Sbjct: 608 PEKEPVYGLLKELDLHMKE 626
>gi|357114151|ref|XP_003558864.1| PREDICTED: pentatricopeptide repeat-containing protein At4g35130,
chloroplastic-like [Brachypodium distachyon]
Length = 782
Score = 348 bits (892), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 192/620 (30%), Positives = 331/620 (53%), Gaps = 10/620 (1%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+IR + G E L+ Y +ML G + FTFP+V+K CA + ++ +G+ HS +++G
Sbjct: 78 VIRGFADAGLPEAALAAYRAMLAAGARPDRFTFPVVVKCCARLGALEEGRAAHSAAIRLG 137
Query: 61 F-QQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAIL 119
+ + L+ Y+K + +V D MPVR +V+WNS++ + L A+
Sbjct: 138 LVGSEVYTGNSLLAFYAKLGMVADAERVFDGMPVR--DIVTWNSMVDGYVSNGLGALALD 195
Query: 120 VLKEMWV-LGLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSM 174
+EM L ++ ++ ++ C + QG +H V + GL ++ + S++ M
Sbjct: 196 CFREMHEGLQVQHDGVGIIAALAACCLDSALMQGREVHAYVIRHGL-EQDVKVGTSLLDM 254
Query: 175 YAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVF 234
Y K G + A +F + ++V+W +IGGY G EAF QM+ ++V
Sbjct: 255 YCKCGAIASAEGMFATMPSRTVVTWNCMIGGYALNGCPEEAFDCFVQMKAEGHQVEVVTA 314
Query: 235 LNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLE 294
+NL+ CAQ + S+H + +S + L+ L+ MY+K G ++ + +F +
Sbjct: 315 INLLAACAQTESSLYGRSVHGYVTRSQFLPHVVLETALLEMYSKVGKVKSSETIFGQMTN 374
Query: 295 KSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEI 354
K++ W +MI Y +EA+ LF LL + P+ T++ + A LG L + +++
Sbjct: 375 KTLVSWNNMIAAYMYKEMYNEAITLFLELLNQPLYPDYFTMSAVVPAFVLLGLLRQCRQM 434
Query: 355 EEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMG 414
YIV N V +++HM+++CG + ++++F+++ KD+ W+ +I GYAIHG G
Sbjct: 435 HSYIVRLDYGENTLVTNAVMHMYARCGDVVSSRKIFDKMAGKDVISWNTIIMGYAIHGQG 494
Query: 415 DQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYL 474
AL +F +M+ GL+P+ + S+L+ACS SGM D+G F MQ ++GI P IEHY
Sbjct: 495 KIALEMFSEMKS-NGLQPNESTFVSVLTACSVSGMADEGWIQFNLMQRDYGIIPQIEHYG 553
Query: 475 CLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPG 534
C+ DLLGRAG LK I +P+ ++W LL+A +++++ EYAA+ + L
Sbjct: 554 CMTDLLGRAGDLREVLKFIESIPITPTFRIWGSLLTASRNRNDIDIAEYAAERIFELEHD 613
Query: 535 STGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHL 594
+TG Y+++++++ AG W++ R M ++ L + S VE+ GS FV GD +H
Sbjct: 614 NTGCYVILSSMYADAGRWEDVQRIRSSMMEKGLRRTDARSIVELHGSSCSFVNGDMTHPQ 673
Query: 595 SVDIRKTLKELHIKLLEAGY 614
S I + L K+ E Y
Sbjct: 674 SKTIHEVSDVLSRKIGETDY 693
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 104/221 (47%), Gaps = 12/221 (5%)
Query: 285 ARRVFDAVL----EKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLS 340
A R+ DA+ FL +I G+A G P A+ ++ +L RP+ T +
Sbjct: 56 AGRMHDALAAVRSSPDAFLHNVVIRGFADAGLPEAALAAYRAMLAAGARPDRFTFPVVVK 115
Query: 341 ACAELGSLSKGKEIEEYIVLNGL-ESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLA 399
CA LG+L +G+ + GL S SL+ ++K G + A+ VF+ +P +D+
Sbjct: 116 CCARLGALEEGRAAHSAAIRLGLVGSEVYTGNSLLAFYAKLGMVADAERVFDGMPVRDIV 175
Query: 400 VWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKS 459
W++M++GY +G+G AL+ F +M ++ D V + L+AC +D L +
Sbjct: 176 TWNSMVDGYVSNGLGALALDCFREMHEGLQVQHDGVGIIAALAACC----LDSALMQGRE 231
Query: 460 MQS---NFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMP 497
+ + G+E ++ L+D+ + G A MP
Sbjct: 232 VHAYVIRHGLEQDVKVGTSLLDMYCKCGAIASAEGMFATMP 272
>gi|224121686|ref|XP_002318647.1| predicted protein [Populus trichocarpa]
gi|222859320|gb|EEE96867.1| predicted protein [Populus trichocarpa]
Length = 744
Score = 348 bits (892), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 197/625 (31%), Positives = 332/625 (53%), Gaps = 13/625 (2%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQT--GVHGNSFTFPLVLKACANINSIWDGKRVHSHVLK 58
MI +G + ++L + M++ G + N L +CA+I + G +H ++K
Sbjct: 111 MISGFCQSGDYVKSLVMFRRMVKECGGSYHNRVACLAALSSCASIKCLTHGLEIHGFLVK 170
Query: 59 VGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEM---PVRLRSVVSWNSIISAH-SRACLN 114
G D F+ + LI+MY KC D ++ V + + + R++ WN +I + S CL+
Sbjct: 171 KGVDSDEFLVSALIEMYMKCGDIKNAENVFERIRDNELVGRNMAVWNVMILGYVSNECLS 230
Query: 115 DEAILVLKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANS 170
A+ + EM LG+ +ST V V+ CS G +H + LGL ++++ + +
Sbjct: 231 -LALELFVEMLELGISPDSSTVVVVLVLCSQLLDLAVGKQIHGLILGLGL-DDDVRVGTA 288
Query: 171 VMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPD 230
+M MY K G + IF ++V W +++ G NEA ++ PD
Sbjct: 289 LMEMYFKCGDPETSLQIFKRSQNHNLVMWGSVMLNCAQNGYPNEALEFFSEFMLDCGFPD 348
Query: 231 LVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFD 290
V+ L + C+ + +++H +K G++++ + LV Y KCGD+E A++VF
Sbjct: 349 PVILLAALRACSFLSLKPRGMAIHGFAIKMGFDSDVFVGGALVDFYGKCGDMEYAQQVFY 408
Query: 291 AVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSK 350
+ + + W ++I G+AQ EA+ F+ + ++PN T+A LS C L +
Sbjct: 409 GLSTRDLVSWNALISGFAQNKCADEALKAFRDMQSKQIKPNTVTMACILSVCTHLSVMIL 468
Query: 351 GKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAI 410
KE+ Y++ + E+N V SLI ++KCG I+ ++ VFE++P ++ W++++ G+ +
Sbjct: 469 CKEVHCYLLRHWFETNALVNNSLISAYAKCGDIHSSRTVFEKLPVRNEVTWNSILLGFGM 528
Query: 411 HGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSI 470
HG D+ F KM+ +KPD +TS+LS+CSHSG VD G +F SM ++ +EP +
Sbjct: 529 HGRTDEMFATFEKMKEAN-IKPDHGTFTSLLSSCSHSGKVDAGWKYFNSMMEDYNLEPRV 587
Query: 471 EHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLT 530
E Y C+VDLLGRAG + A I MP ++W LL++C H N +L E A ++
Sbjct: 588 EQYTCMVDLLGRAGNLNQAYDLIMSMPCSPDDRIWGSLLASCKNHGNTKLAEVVANHIFE 647
Query: 531 LNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDR 590
L+ S G +L+ANL+ +G E R + L K+PG S +E+D S+ +FVAGD
Sbjct: 648 LDASSVGYRVLLANLYEDSGNLNEVFRVRTDIKQMGLKKQPGCSWIEVDNSIHIFVAGDY 707
Query: 591 SHHLSVDIRKTLKELHIKLLEAGYI 615
SH S DI T++ L +++ GY+
Sbjct: 708 SHDRSGDIYATIESLSLEMKRVGYV 732
Score = 213 bits (543), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 131/458 (28%), Positives = 240/458 (52%), Gaps = 16/458 (3%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTF-PLVLKACANINSIWDGKRVHSHVLKV 59
MI+ T +G FE+ + Y ++ G F F P ++KA + + GK++H H+LK
Sbjct: 9 MIKECTEDGFFEDAIRVYLDFIECGFPVEEFRFFPCLIKAFGGLYDVNKGKQIHGHLLKF 68
Query: 60 GFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAIL 119
GF QD FV+ L+ MY KC ++ + + M R VSWN++IS ++ ++++
Sbjct: 69 GFLQDIFVKNSLLGMYWKCGAGGNAVDMFERM--EERDSVSWNTMISGFCQSGDYVKSLV 126
Query: 120 VLKEM--WVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMS 173
+ + M G + ++ +S C+ G+ +H + K G+ ++E L ++++
Sbjct: 127 MFRRMVKECGGSYHNRVACLAALSSCASIKCLTHGLEIHGFLVKKGVDSDEF-LVSALIE 185
Query: 174 MYAKFGKVNEARSIFDEIGETSIVS-----WTTIIGGYVNVGNVNEAFGLCNQMRRMSVT 228
MY K G + A ++F+ I + +V W +I GYV+ ++ A L +M + ++
Sbjct: 186 MYMKCGDIKNAENVFERIRDNELVGRNMAVWNVMILGYVSNECLSLALELFVEMLELGIS 245
Query: 229 PDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRV 288
PD + +++ C+Q+ +L + +H L+L G +++ + L+ MY KCGD E + ++
Sbjct: 246 PDSSTVVVVLVLCSQLLDLAVGKQIHGLILGLGLDDDVRVGTALMEMYFKCGDPETSLQI 305
Query: 289 FDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSL 348
F ++ +W S++ AQ GYP+EA+ F + P+ L L AC+ L
Sbjct: 306 FKRSQNHNLVMWGSVMLNCAQNGYPNEALEFFSEFMLDCGFPDPVILLAALRACSFLSLK 365
Query: 349 SKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGY 408
+G I + + G +S+ V +L+ + KCG + A++VF + +DL W+A+I+G+
Sbjct: 366 PRGMAIHGFAIKMGFDSDVFVGGALVDFYGKCGDMEYAQQVFYGLSTRDLVSWNALISGF 425
Query: 409 AIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSH 446
A + D+AL F MQ + +KP+ V ILS C+H
Sbjct: 426 AQNKCADEALKAFRDMQSKQ-IKPNTVTMACILSVCTH 462
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 78/166 (46%), Gaps = 20/166 (12%)
Query: 290 DAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLS 349
D E ++ ++ I + G+P E F L+K A L ++
Sbjct: 16 DGFFEDAIRVYLDFI----ECGFPVEEFRFFPCLIK---------------AFGGLYDVN 56
Query: 350 KGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYA 409
KGK+I +++ G + V+ SL+ M+ KCG A ++FER+ ++D W+ MI+G+
Sbjct: 57 KGKQIHGHLLKFGFLQDIFVKNSLLGMYWKCGAGGNAVDMFERMEERDSVSWNTMISGFC 116
Query: 410 IHGMGDQALNLFYKM-QHVEGLKPDAVVYTSILSACSHSGMVDDGL 454
G ++L +F +M + G + V + LS+C+ + GL
Sbjct: 117 QSGDYVKSLVMFRRMVKECGGSYHNRVACLAALSSCASIKCLTHGL 162
>gi|449508249|ref|XP_004163262.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g33170-like [Cucumis sativus]
Length = 840
Score = 348 bits (892), Expect = 7e-93, Method: Compositional matrix adjust.
Identities = 195/624 (31%), Positives = 336/624 (53%), Gaps = 42/624 (6%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
++ NG E L +S M G + +T VL+AC+ ++ + GK +H + +K+
Sbjct: 105 LVSGYCKNGCEVEGLRQFSQMWSDGQKPSQYTLGSVLRACSTLSLLHTGKMIHCYAIKIQ 164
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+ + FV TGL+DMYSKC + + + +P R ++ V W ++++ +++ + +AI
Sbjct: 165 LEANIFVATGLVDMYSKCKCLLEAEYLFFSLPDR-KNYVQWTAMLTGYAQNGESLKAIQC 223
Query: 121 LKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
KEM G+E + TF S+++ C+ + G +H C+ G N + + ++++ MYA
Sbjct: 224 FKEMRNQGMESNHFTFPSILTACTSISAYAFGRQVHGCIIWSGFGPN-VYVQSALVDMYA 282
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K G + AR I D + +V W ++I G V G + EA L ++M + D + +
Sbjct: 283 KCGDLASARMILDTMEIDDVVCWNSMIVGCVTHGYMEEALVLFHKMHNRDIRIDDFTYPS 342
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
++ A NL + S+HSL +K+G++ + N LV MY K G+L A VF+ +L+K
Sbjct: 343 VLKSLASCKNLKIGESVHSLTIKTGFDACKTVSNALVDMYAKQGNLSCALDVFNKILDKD 402
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEE 356
V WTS++ GY G+ +A+ LF + V ++ +A SACAEL + G+++
Sbjct: 403 VISWTSLVTGYVHNGFHEKALQLFCDMRTARVDLDQFVVACVFSACAELTVIEFGRQVHA 462
Query: 357 YIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQ 416
+ + S + SLI M++KCG + A V + + +++ W+A+I GYA
Sbjct: 463 NFIKSSAGSLLSAENSLITMYAKCGCLEDAIRVXDSMETRNVISWTAIIVGYA------- 515
Query: 417 ALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCL 476
+G+V+ G S+F+SM+ +GI+P+ + Y C+
Sbjct: 516 -----------------------------QNGLVETGQSYFESMEKVYGIKPASDRYACM 546
Query: 477 VDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGST 536
+DLLGRAG+ + A ++ M VE A +W LLSAC H N+ELGE A KNL+ L P ++
Sbjct: 547 IDLLGRAGKINEAEHLLNRMDVEPDATIWKSLLSACRVHGNLELGERAGKNLIKLEPSNS 606
Query: 537 GNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSV 596
Y+L++N+F+ AG W++AA R M + +EPG+S +E+ V F++ DRSH L+
Sbjct: 607 LPYVLLSNMFSVAGRWEDAAHIRRAMKTMGIXQEPGYSWIEMKSQVHTFISEDRSHPLAA 666
Query: 597 DIRKTLKELHIKLLEAGYIAEADI 620
+I + E+ I + EAG++ + +
Sbjct: 667 EIYSKIDEMMILIKEAGHVPDMNF 690
Score = 182 bits (463), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 130/513 (25%), Positives = 239/513 (46%), Gaps = 23/513 (4%)
Query: 63 QDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLK 122
+D + +I Y+ + V +RK+ +E P+ + ++W+S++S + + E +
Sbjct: 66 RDKYTWNIMISAYANLGNLVEARKLFNETPIX--NSITWSSLVSGYCKNGCEVEGLRQFS 123
Query: 123 EMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKF 178
+MW G + S T SV+ CS G +HC K+ L N I +A ++ MY+K
Sbjct: 124 QMWSDGQKPSQYTLGSVLRACSTLSLLHTGKMIHCYAIKIQLEAN-IFVATGLVDMYSKC 182
Query: 179 GKVNEARSIFDEIGE-TSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNL 237
+ EA +F + + + V WT ++ GY G +A +MR + + F ++
Sbjct: 183 KCLLEAEYLFFSLPDRKNYVQWTAMLTGYAQNGESLKAIQCFKEMRNQGMESNHFTFPSI 242
Query: 238 ILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSV 297
+ C + +H ++ SG+ + + LV MY KCGDL AR + D + V
Sbjct: 243 LTACTSISAYAFGRQVHGCIIWSGFGPNVYVQSALVDMYAKCGDLASARMILDTMEIDDV 302
Query: 298 FLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEY 357
W SMI G GY EA+ LF ++ +R ++ T + L + A +L G+ +
Sbjct: 303 VCWNSMIVGCVTHGYMEEALVLFHKMHNRDIRIDDFTYPSVLKSLASCKNLKIGESVHSL 362
Query: 358 IVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQA 417
+ G ++ + V +L+ M++K G ++ A +VF ++ DKD+ W++++ GY +G ++A
Sbjct: 363 TIKTGFDACKTVSNALVDMYAKQGNLSCALDVFNKILDKDVISWTSLVTGYVHNGFHEKA 422
Query: 418 LNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYL--- 474
L LF M+ + D V + SAC+ +++ F + + +NF I+ S L
Sbjct: 423 LQLFCDMRTAR-VDLDQFVVACVFSACAELTVIE----FGRQVHANF-IKSSAGSLLSAE 476
Query: 475 -CLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEY---AAKNLLT 530
L+ + + G + A++ M W ++ ++ VE G+ + + +
Sbjct: 477 NSLITMYAKCGCLEDAIRVXDSMETR-NVISWTAIIVGYAQNGLVETGQSYFESMEKVYG 535
Query: 531 LNPGSTGNYILMANLFTSAGMWKEAATARGLMD 563
+ P S Y M +L AG EA MD
Sbjct: 536 IKPASD-RYACMIDLLGRAGKINEAEHLLNRMD 567
Score = 135 bits (339), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 93/377 (24%), Positives = 179/377 (47%), Gaps = 37/377 (9%)
Query: 168 ANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQ------ 221
+N ++S +K G+V+EAR +FD++ +W +I Y N+GN+ EA L N+
Sbjct: 40 SNQLLSELSKNGRVDEARKLFDQMPYRDKYTWNIMISAYANLGNLVEARKLFNETPIXNS 99
Query: 222 -------------------MRRMS------VTPDLVVFLNLILGCAQVGNLFLALSMHSL 256
+R+ S P +++ C+ + L +H
Sbjct: 100 ITWSSLVSGYCKNGCEVEGLRQFSQMWSDGQKPSQYTLGSVLRACSTLSLLHTGKMIHCY 159
Query: 257 LLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFL-WTSMIGGYAQLGYPSE 315
+K + LV MY+KC L A +F ++ ++ ++ WT+M+ GYAQ G +
Sbjct: 160 AIKIQLEANIFVATGLVDMYSKCKCLLEAEYLFFSLPDRKNYVQWTAMLTGYAQNGESLK 219
Query: 316 AVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIH 375
A+ FK + + N T + L+AC + + + G+++ I+ +G N VQ++L+
Sbjct: 220 AIQCFKEMRNQGMESNHFTFPSILTACTSISAYAFGRQVHGCIIWSGFGPNVYVQSALVD 279
Query: 376 MFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAV 435
M++KCG + A+ + + + D+ W++MI G HG ++AL LF+KM H ++ D
Sbjct: 280 MYAKCGDLASARMILDTMEIDDVVCWNSMIVGCVTHGYMEEALVLFHKM-HNRDIRIDDF 338
Query: 436 VYTSILSACSHSGMVDDGLSFFK-SMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIH 494
Y S+L + + + G S ++++ F ++ + LVD+ + G AL +
Sbjct: 339 TYPSVLKSLASCKNLKIGESVHSLTIKTGFDACKTVSN--ALVDMYAKQGNLSCALDVFN 396
Query: 495 EMPVEVQAQVWAPLLSA 511
++ ++ W L++
Sbjct: 397 KI-LDKDVISWTSLVTG 412
>gi|449438685|ref|XP_004137118.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Cucumis sativus]
gi|449528041|ref|XP_004171015.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Cucumis sativus]
Length = 868
Score = 348 bits (892), Expect = 7e-93, Method: Compositional matrix adjust.
Identities = 198/633 (31%), Positives = 330/633 (52%), Gaps = 26/633 (4%)
Query: 2 IRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGF 61
I N L + M + G+ + T+ V ++CA +++ G ++H H LK F
Sbjct: 230 IAGCVQNDQLLRGLKLFKEMQRKGIGVSQSTYASVFRSCAGLSASRLGTQLHCHALKTDF 289
Query: 62 QQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVL 121
D V T +DMY+KC + + K+ +P ++ S+N++I ++R N++
Sbjct: 290 GSDVIVGTATLDMYAKCDNMSDAYKLFSLLPDH--NLQSYNAMIIGYAR---NEQGFQAF 344
Query: 122 KEMWVLGLELSASTF-------------VSVVSGCSFRQGISMHCCVYKLGLLNNEIPLA 168
K L L+L ++F +V+ G S +G+ +H K L +N I +A
Sbjct: 345 K----LFLQLQKNSFSFDEVSLSGALSAAAVIKGHS--EGLQLHGLAIKSNLSSN-ICVA 397
Query: 169 NSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVT 228
N+++ MY K G + EA +FDE+ VSW II + + M R +
Sbjct: 398 NAILDMYGKCGALVEASGLFDEMEIRDPVSWNAIITACEQNESEGKTLSHFGAMLRSKME 457
Query: 229 PDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRV 288
PD + +++ CA + +H ++KSG + + + LV MY+KCG +E A ++
Sbjct: 458 PDEFTYGSVLKACAGQRAFSNGMEVHGRIIKSGMGLKMFVGSALVDMYSKCGMMEEAEKI 517
Query: 289 FDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSL 348
+ E+++ W ++I G++ ++ F +L+ V P+ T AT L CA L ++
Sbjct: 518 HYRLEEQTMVSWNAIISGFSLQKKSEDSQRFFSHMLEMGVEPDNFTYATVLDTCANLATV 577
Query: 349 SKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGY 408
GK+I ++ L S+ + ++L+ M+SKCG ++ + +F + P +D W+AMI G+
Sbjct: 578 GLGKQIHAQMIKLELLSDVYITSTLVDMYSKCGNMHDSLLMFRKAPKRDSVTWNAMICGF 637
Query: 409 AIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEP 468
A HG+G++AL LF M H E +KP+ + S+L ACSH G GL +F+ M S + +EP
Sbjct: 638 AYHGLGEEALELFEHMLH-ENIKPNHATFVSVLRACSHVGNAKKGLFYFQKMASIYALEP 696
Query: 469 SIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNL 528
+EHY C+VD+LGR+G+ + AL+ I +MP E A +W LLS C NVE+ E AA +L
Sbjct: 697 QLEHYSCMVDILGRSGQVEEALRLIQDMPFEADAIIWRTLLSICKIQGNVEVAEKAASSL 756
Query: 529 LTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAG 588
L L+P + Y L++N++ AGMW++ + R M L KEPG S +E+ V F+
Sbjct: 757 LKLDPEDSSAYTLLSNIYADAGMWQQVSKIRQTMRSHNLKKEPGCSWIEVKDEVHTFLVC 816
Query: 589 DRSHHLSVDIRKTLKELHIKLLEAGYIAEADIV 621
D++H I L L + +G E D +
Sbjct: 817 DKAHPKCEMIYSLLDLLICDMRRSGCAPEIDTI 849
Score = 188 bits (478), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 127/507 (25%), Positives = 248/507 (48%), Gaps = 21/507 (4%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+I NG +++++ + M GV + T + LK C+ + G ++H +++G
Sbjct: 128 LISGYLQNGDIQKSIAVFLKMRDLGVMFDHTTLAVSLKICSLLEDQVLGIQIHGIAVQMG 187
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAIL- 119
F D + L+DMY+KC+ S V E+P ++ +SW++ I+ C+ ++ +L
Sbjct: 188 FDYDVVTGSALVDMYAKCNSLEDSLDVFSELPD--KNWISWSAAIA----GCVQNDQLLR 241
Query: 120 ---VLKEMWVLGLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVM 172
+ KEM G+ +S ST+ SV C + R G +HC K +++ + + +
Sbjct: 242 GLKLFKEMQRKGIGVSQSTYASVFRSCAGLSASRLGTQLHCHALKTD-FGSDVIVGTATL 300
Query: 173 SMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLV 232
MYAK +++A +F + + ++ S+ +I GY +AF L Q+++ S + D V
Sbjct: 301 DMYAKCDNMSDAYKLFSLLPDHNLQSYNAMIIGYARNEQGFQAFKLFLQLQKNSFSFDEV 360
Query: 233 VFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAV 292
+ A + L +H L +KS ++ + N ++ MY KCG L A +FD +
Sbjct: 361 SLSGALSAAAVIKGHSEGLQLHGLAIKSNLSSNICVANAILDMYGKCGALVEASGLFDEM 420
Query: 293 LEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGK 352
+ W ++I Q + ++ F +L++ + P+E T + L ACA + S G
Sbjct: 421 EIRDPVSWNAIITACEQNESEGKTLSHFGAMLRSKMEPDEFTYGSVLKACAGQRAFSNGM 480
Query: 353 EIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHG 412
E+ I+ +G+ V ++L+ M+SKCG + +A+++ R+ ++ + W+A+I+G+++
Sbjct: 481 EVHGRIIKSGMGLKMFVGSALVDMYSKCGMMEEAEKIHYRLEEQTMVSWNAIISGFSLQK 540
Query: 413 MGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEH 472
+ + F M + G++PD Y ++L C++ V G M +E +
Sbjct: 541 KSEDSQRFFSHMLEM-GVEPDNFTYATVLDTCANLATVGLGKQIHAQM---IKLELLSDV 596
Query: 473 YL--CLVDLLGRAGRFDLALKTIHEMP 497
Y+ LVD+ + G +L + P
Sbjct: 597 YITSTLVDMYSKCGNMHDSLLMFRKAP 623
Score = 129 bits (325), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 112/488 (22%), Positives = 213/488 (43%), Gaps = 85/488 (17%)
Query: 32 TFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEM 91
TF + + C+N ++ GK H+H++ GF FV
Sbjct: 26 TFSHIFQECSNRRALKPGKEAHAHMILSGFTPTVFVT----------------------- 62
Query: 92 PVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCSFRQGISM 151
N +I + + C + A V +EM + ++ ++V GC
Sbjct: 63 ----------NCLIQMYVKCCALEYAYKVFEEM----PQRDIVSWNTMVFGC-------- 100
Query: 152 HCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGET-SIVSWTTIIGGYVNVG 210
A G++ A+++F+ + +VSW ++I GY+ G
Sbjct: 101 ------------------------AGAGRMELAQAVFNSMPHHGDVVSWNSLISGYLQNG 136
Query: 211 NVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDN 270
++ ++ + +MR + V D + C+ + + L + +H + ++ G++ + +
Sbjct: 137 DIQKSIAVFLKMRDLGVMFDHTTLAVSLKICSLLEDQVLGIQIHGIAVQMGFDYDVVTGS 196
Query: 271 LLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRP 330
LV MY KC LE + VF + +K+ W++ I G Q + LFK + + +
Sbjct: 197 ALVDMYAKCNSLEDSLDVFSELPDKNWISWSAAIAGCVQNDQLLRGLKLFKEMQRKGIGV 256
Query: 331 NEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVF 390
+++T A+ +CA L + G ++ + + S+ V T+ + M++KC ++ A ++F
Sbjct: 257 SQSTYASVFRSCAGLSASRLGTQLHCHALKTDFGSDVIVGTATLDMYAKCDNMSDAYKLF 316
Query: 391 ERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACS----H 446
+PD +L ++AMI GYA + G QA LF ++Q D V + LSA + H
Sbjct: 317 SLLPDHNLQSYNAMIIGYARNEQGFQAFKLFLQLQK-NSFSFDEVSLSGALSAAAVIKGH 375
Query: 447 S-GMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQV- 504
S G+ GL+ ++ SN + +I +D+ G+ G A EM E++ V
Sbjct: 376 SEGLQLHGLAIKSNLSSNICVANAI------LDMYGKCGALVEASGLFDEM--EIRDPVS 427
Query: 505 WAPLLSAC 512
W +++AC
Sbjct: 428 WNAIITAC 435
>gi|357118484|ref|XP_003560984.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03380,
mitochondrial-like [Brachypodium distachyon]
Length = 678
Score = 347 bits (891), Expect = 7e-93, Method: Compositional matrix adjust.
Identities = 199/549 (36%), Positives = 299/549 (54%), Gaps = 9/549 (1%)
Query: 35 LVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVR 94
L LKA G+R+H V+K G D FV L+DMY+K D ++RKV D +P R
Sbjct: 133 LALKAAVRSADFGYGRRLHCDVVKAG-GGDLFVMNNLVDMYAKGGDLKNARKVFDRIPDR 191
Query: 95 LRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGC----SFRQGIS 150
+VVSW S++S + L E +++ EM + S T SV+ C S QG
Sbjct: 192 --NVVSWTSMLSGCLQNGLAKEGLVLFNEMRQESILPSEYTMASVLMACTMLGSLHQGRL 249
Query: 151 MHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVG 210
+H V K GL++N + +++ MY K G+ +AR +FDE+ +V WTT+I GY G
Sbjct: 250 IHGSVMKHGLVSNHF-ITAAMLDMYVKCGEAEDARQVFDELSFVDLVLWTTMIVGYTQNG 308
Query: 211 NVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDN 270
+ +A L + M + P+ V ++ AQ+ NL L S+H + +K G D + N
Sbjct: 309 SPLDALLLFVDDKFMRIVPNSVTIATVLSASAQLRNLSLGRSIHGISVKLGAVENDVVMN 368
Query: 271 LLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRP 330
LV MY KC L A+ +F VL K V W S+I GYA+ S+A+ LF + P
Sbjct: 369 ALVDMYAKCKALSDAKGIFGRVLNKDVVTWNSLIAGYAENDMGSDALMLFSHMRVQGSLP 428
Query: 331 NEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVF 390
+ ++ LSAC LG L GK Y V + SN V T+L+++++KC + A+ VF
Sbjct: 429 DAISVVNALSACVCLGDLLIGKCFHTYAVKHAFMSNIYVNTALLNLYNKCADLPSAQRVF 488
Query: 391 ERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMV 450
+ D++ W AMI GY + G +++LF +M + ++P+ V+TSILS CSH+GMV
Sbjct: 489 SEMNDRNTVTWGAMIGGYGMQGDSAGSIDLFNEMLK-DNIQPNEAVFTSILSTCSHTGMV 547
Query: 451 DDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLS 510
G F+SM F I PS++HY C+VD+L RAG + AL+ I +MP++ +W L
Sbjct: 548 TVGKKCFESMAHYFNITPSMKHYACMVDVLARAGNLEEALEFIQKMPMQADTSIWQAFLH 607
Query: 511 ACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKE 570
C H +E E A ++ L+P + ++M+NL+TS G W ++ R LM +R L K
Sbjct: 608 GCKLHSRLEFAEEAVNRMMVLHPDTPDFCVMMSNLYTSYGRWDKSLAIRKLMKERGLVKL 667
Query: 571 PGWSQVEID 579
PG S V ++
Sbjct: 668 PGCSSVGLE 676
Score = 223 bits (568), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 141/420 (33%), Positives = 223/420 (53%), Gaps = 24/420 (5%)
Query: 36 VLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRL 95
+L AC + S+ + +H+ +L G + T L+ Y+ D S+R+VLDE P
Sbjct: 34 LLPACTTLPSL---RALHARLLAHGLLRGLRAHTKLLSCYAALGDLASARRVLDETP--H 88
Query: 96 RSVVSWNSIISAHSRACLNDEAILVLKEMW-----------VLGLELSASTFVSVVSGCS 144
++ + H+ A + EA+ V ++M VL L L A+ V
Sbjct: 89 PDAYTYKVALGWHAAAGRHAEAVAVHRDMRRRCPAEQEDVVVLSLALKAA-----VRSAD 143
Query: 145 FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIG 204
F G +HC V K G ++ + N+++ MYAK G + AR +FD I + ++VSWT+++
Sbjct: 144 FGYGRRLHCDVVKAG--GGDLFVMNNLVDMYAKGGDLKNARKVFDRIPDRNVVSWTSMLS 201
Query: 205 GYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNN 264
G + G E L N+MR+ S+ P ++++ C +G+L +H ++K G +
Sbjct: 202 GCLQNGLAKEGLVLFNEMRQESILPSEYTMASVLMACTMLGSLHQGRLIHGSVMKHGLVS 261
Query: 265 EDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLL 324
+ ++ MY KCG+ E AR+VFD + + LWT+MI GY Q G P +A+ LF
Sbjct: 262 NHFITAAMLDMYVKCGEAEDARQVFDELSFVDLVLWTTMIVGYTQNGSPLDALLLFVDDK 321
Query: 325 KTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRIN 384
+ PN T+AT LSA A+L +LS G+ I V G N V +L+ M++KC ++
Sbjct: 322 FMRIVPNSVTIATVLSASAQLRNLSLGRSIHGISVKLGAVENDVVMNALVDMYAKCKALS 381
Query: 385 KAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSAC 444
AK +F RV +KD+ W+++I GYA + MG AL LF M+ V+G PDA+ + LSAC
Sbjct: 382 DAKGIFGRVLNKDVVTWNSLIAGYAENDMGSDALMLFSHMR-VQGSLPDAISVVNALSAC 440
Score = 198 bits (504), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 121/467 (25%), Positives = 237/467 (50%), Gaps = 11/467 (2%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
M+ NG +E L ++ M Q + + +T VL AC + S+ G+ +H V+K G
Sbjct: 199 MLSGCLQNGLAKEGLVLFNEMRQESILPSEYTMASVLMACTMLGSLHQGRLIHGSVMKHG 258
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+ F+ ++DMY KC + +R+V DE+ +V W ++I +++ +A+L+
Sbjct: 259 LVSNHFITAAMLDMYVKCGEAEDARQVFDEL--SFVDLVLWTTMIVGYTQNGSPLDALLL 316
Query: 121 LKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
+ + + ++ T +V+S + G S+H KLG + N++ + N+++ MYA
Sbjct: 317 FVDDKFMRIVPNSVTIATVLSASAQLRNLSLGRSIHGISVKLGAVENDV-VMNALVDMYA 375
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K +++A+ IF + +V+W ++I GY ++A L + MR PD + +N
Sbjct: 376 KCKALSDAKGIFGRVLNKDVVTWNSLIAGYAENDMGSDALMLFSHMRVQGSLPDAISVVN 435
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
+ C +G+L + H+ +K + + ++ L+++Y KC DL A+RVF + +++
Sbjct: 436 ALSACVCLGDLLIGKCFHTYAVKHAFMSNIYVNTALLNLYNKCADLPSAQRVFSEMNDRN 495
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEE 356
W +MIGGY G + +++LF +LK +++PNEA + LS C+ G ++ GK+ E
Sbjct: 496 TVTWGAMIGGYGMQGDSAGSIDLFNEMLKDNIQPNEAVFTSILSTCSHTGMVTVGKKCFE 555
Query: 357 YIV-LNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVP-DKDLAVWSAMINGYAIHGMG 414
+ + + + ++ + ++ G + +A E +++P D ++W A ++G +H
Sbjct: 556 SMAHYFNITPSMKHYACMVDVLARAGNLEEALEFIQKMPMQADTSIWQAFLHGCKLHSRL 615
Query: 415 DQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQ 461
+ A +M + PD V S L + G D L+ K M+
Sbjct: 616 EFAEEAVNRMMVLHPDTPDFCVMMSNLY--TSYGRWDKSLAIRKLMK 660
>gi|357449413|ref|XP_003594983.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355484031|gb|AES65234.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 702
Score = 347 bits (891), Expect = 7e-93, Method: Compositional matrix adjust.
Identities = 183/500 (36%), Positives = 293/500 (58%), Gaps = 7/500 (1%)
Query: 123 EMWVLGLELSASTFVSVVSGCSFRQGISM----HCCVYKLGLLNNEIPLANSVMSMYAKF 178
+M L + + TF V C+ + I M HC V+KLGL +N+ NS+++MY +
Sbjct: 107 QMKTLNISPNNFTFPFVFLACANLEEIRMARLAHCEVFKLGL-DNDHHTVNSMVTMYFRC 165
Query: 179 GKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMS-VTPDLVVFLNL 237
G+ AR +FDEI E +VSW +++ GY +G EA + ++R S PD + +++
Sbjct: 166 GENGVARKVFDEITEKDLVSWNSLLSGYAKLGFAREAVEVFGRLREESGFEPDEMSLVSV 225
Query: 238 ILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSV 297
+ C ++G+L L + +++ G + + L+SMY+KCG+L +RR+FD + +
Sbjct: 226 LGACGELGDLELGRWVEGFVVERGMKVNSYIGSALISMYSKCGELVSSRRIFDGMPSRDF 285
Query: 298 FLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEY 357
W + I YAQ G EA++LF + + V PN+ TL LSACA +G+L GK+++EY
Sbjct: 286 ITWNAAISAYAQNGMADEAISLFHSMKENGVDPNKVTLTAVLSACASIGALDLGKQMDEY 345
Query: 358 IVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQA 417
GL+ + V T+LI M++KCG + A+ VF +P K+ A W+AMI+ A HG +A
Sbjct: 346 ATHRGLQHDIFVATALIDMYAKCGSLESAQRVFNDMPRKNDASWNAMISALASHGKAKEA 405
Query: 418 LNLFYKMQHVEG-LKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCL 476
L+LF +M G +P+ + + S+LSAC H+G+VD+G F M + FG+ P IEHY C+
Sbjct: 406 LSLFERMSDEGGSARPNDITFVSLLSACVHAGLVDEGYRLFDMMSTLFGLVPKIEHYSCM 465
Query: 477 VDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGST 536
VDLL RAG A I +MP + L SAC + NV++GE + LL L+P ++
Sbjct: 466 VDLLSRAGHLYEAWDVIEKMPEKPDNVTLGALHSACQRKKNVDIGERVIQMLLELDPSNS 525
Query: 537 GNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSV 596
GNYI+ + ++ + MW +AA R LM + +TK PG S +E+ ++ F++GD S+
Sbjct: 526 GNYIISSKIYENLNMWDDAARMRALMRENGVTKTPGCSWIEVGNQLREFLSGDGLTLDSI 585
Query: 597 DIRKTLKELHIKLLEAGYIA 616
D+R + L+ +L + GY++
Sbjct: 586 DVRNIIDLLYEELKKEGYLS 605
Score = 199 bits (505), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 101/299 (33%), Positives = 177/299 (59%), Gaps = 4/299 (1%)
Query: 218 LCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYT 277
L +QM+ ++++P+ F + L CA + + +A H + K G +N+ N +V+MY
Sbjct: 104 LYHQMKTLNISPNNFTFPFVFLACANLEEIRMARLAHCEVFKLGLDNDHHTVNSMVTMYF 163
Query: 278 KCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTS-VRPNEATLA 336
+CG+ +AR+VFD + EK + W S++ GYA+LG+ EAV +F RL + S P+E +L
Sbjct: 164 RCGENGVARKVFDEITEKDLVSWNSLLSGYAKLGFAREAVEVFGRLREESGFEPDEMSLV 223
Query: 337 TTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDK 396
+ L AC ELG L G+ +E ++V G++ N + ++LI M+SKCG + ++ +F+ +P +
Sbjct: 224 SVLGACGELGDLELGRWVEGFVVERGMKVNSYIGSALISMYSKCGELVSSRRIFDGMPSR 283
Query: 397 DLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSF 456
D W+A I+ YA +GM D+A++LF+ M+ G+ P+ V T++LSAC+ G +D G
Sbjct: 284 DFITWNAAISAYAQNGMADEAISLFHSMKE-NGVDPNKVTLTAVLSACASIGALDLGKQ- 341
Query: 457 FKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKH 515
++ G++ I L+D+ + G + A + ++MP + A W ++SA H
Sbjct: 342 MDEYATHRGLQHDIFVATALIDMYAKCGSLESAQRVFNDMPRKNDAS-WNAMISALASH 399
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 121/405 (29%), Positives = 200/405 (49%), Gaps = 12/405 (2%)
Query: 1 MIRNSTNN-GSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKV 59
M+R +T + TL Y M + N+FTFP V ACAN+ I + H V K+
Sbjct: 87 MLRATTTTWHDYPLTLHLYHQMKTLNISPNNFTFPFVFLACANLEEIRMARLAHCEVFKL 146
Query: 60 GFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAIL 119
G D ++ MY +C + +RKV DE + + +VSWNS++S +++ EA+
Sbjct: 147 GLDNDHHTVNSMVTMYFRCGENGVARKVFDE--ITEKDLVSWNSLLSGYAKLGFAREAVE 204
Query: 120 VLKEMW-VLGLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSM 174
V + G E + VSV+ C G + V + G+ N + ++++SM
Sbjct: 205 VFGRLREESGFEPDEMSLVSVLGACGELGDLELGRWVEGFVVERGMKVNSY-IGSALISM 263
Query: 175 YAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVF 234
Y+K G++ +R IFD + ++W I Y G +EA L + M+ V P+ V
Sbjct: 264 YSKCGELVSSRRIFDGMPSRDFITWNAAISAYAQNGMADEAISLFHSMKENGVDPNKVTL 323
Query: 235 LNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLE 294
++ CA +G L L M G ++ + L+ MY KCG LE A+RVF+ +
Sbjct: 324 TAVLSACASIGALDLGKQMDEYATHRGLQHDIFVATALIDMYAKCGSLESAQRVFNDMPR 383
Query: 295 KSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKT--SVRPNEATLATTLSACAELGSLSKGK 352
K+ W +MI A G EA++LF+R+ S RPN+ T + LSAC G + +G
Sbjct: 384 KNDASWNAMISALASHGKAKEALSLFERMSDEGGSARPNDITFVSLLSACVHAGLVDEGY 443
Query: 353 EIEEYI-VLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDK 396
+ + + L GL + + ++ + S+ G + +A +V E++P+K
Sbjct: 444 RLFDMMSTLFGLVPKIEHYSCMVDLLSRAGHLYEAWDVIEKMPEK 488
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 76/142 (53%), Gaps = 1/142 (0%)
Query: 312 YPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQT 371
YP ++L+ ++ ++ PN T ACA L + + + GL+++
Sbjct: 98 YPL-TLHLYHQMKTLNISPNNFTFPFVFLACANLEEIRMARLAHCEVFKLGLDNDHHTVN 156
Query: 372 SLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLK 431
S++ M+ +CG A++VF+ + +KDL W+++++GYA G +A+ +F +++ G +
Sbjct: 157 SMVTMYFRCGENGVARKVFDEITEKDLVSWNSLLSGYAKLGFAREAVEVFGRLREESGFE 216
Query: 432 PDAVVYTSILSACSHSGMVDDG 453
PD + S+L AC G ++ G
Sbjct: 217 PDEMSLVSVLGACGELGDLELG 238
>gi|147775281|emb|CAN61593.1| hypothetical protein VITISV_030555 [Vitis vinifera]
Length = 673
Score = 347 bits (891), Expect = 8e-93, Method: Compositional matrix adjust.
Identities = 207/580 (35%), Positives = 313/580 (53%), Gaps = 64/580 (11%)
Query: 50 KRVHSHVLKVGFQQDAFVQTGLIDMYSKCS-----DFVSSRKVLDEMPVRLRSVVSWNSI 104
K+ H+ +L+ G QD+++ L+ Y+ S F SS +V D VR +V WN +
Sbjct: 52 KQAHALILRTGHLQDSYIAGSLVKSYANVSTNRYLSFESSLRVFD--FVRKPNVFLWNCM 109
Query: 105 ISAHSRACLND----EAILVLKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVY 156
I + C+ + +AIL+ EM V + T+ +V+ CS +G+ +H +
Sbjct: 110 I----KVCIENNEPFKAILLYYEMVVAHSRPNKYTYPAVLKACSDSGVVAEGVQVHAHLV 165
Query: 157 KLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIG-ETSIVSWTTIIGGYVNVGNVNEA 215
K GL + + +S + MYA FG++ EAR I D+ G E V W +I GY+ G V A
Sbjct: 166 KHGL-GGDGHILSSAIRMYASFGRLVEARRILDDKGGEVDAVCWNAMIDGYLRFGEVEAA 224
Query: 216 FGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSM 275
L M PD SM S N ++S
Sbjct: 225 RELFEGM------PDR--------------------SMISTW------------NAMISG 246
Query: 276 YTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATL 335
+++CG +E+AR FD + E+ W++MI GY Q G EA+ +F ++ K +RP + L
Sbjct: 247 FSRCGMVEVAREFFDEMKERDEISWSAMIDGYIQEGCFMEALEIFHQMQKEKIRPRKFVL 306
Query: 336 ATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPD 395
+ LSACA LG+L +G+ I Y N ++ + + TSL+ M++KCGRI+ A EVFE++ +
Sbjct: 307 PSVLSACANLGALDQGRWIHTYAKRNSIQLDGVLGTSLVDMYAKCGRIDLAWEVFEKMSN 366
Query: 396 KDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLS 455
K+++ W+AMI G A+HG + A++LF KM + P+ + + +L+AC+H G+V GL+
Sbjct: 367 KEVSSWNAMIGGLAMHGRAEDAIDLFSKMD----IYPNEITFVGVLNACAHGGLVQKGLT 422
Query: 456 FFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKH 515
F SM+ +G+EP IEHY C+VDLLGRAG A K + +P E VW LL AC KH
Sbjct: 423 IFNSMRKEYGVEPQIEHYGCIVDLLGRAGLLTEAEKVVSSIPTEPTPAVWGALLGACRKH 482
Query: 516 HNVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQ 575
NVELGE K LL L P ++G Y L++N++ AG W+E R LM +R + PG S
Sbjct: 483 GNVELGERVGKILLELEPQNSGRYTLLSNIYAKAGRWEEVGEVRKLMKERGIKTTPGTSI 542
Query: 576 VEID-GSVQVFVAGDRSHHLSVDIRKTLKELHIKLLEAGY 614
+++ G V F+ GD SH DI + L ++ +L GY
Sbjct: 543 IDLGRGEVHKFIIGDGSHPQVKDIYQMLDKVKERLQMEGY 582
Score = 168 bits (425), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 114/412 (27%), Positives = 194/412 (47%), Gaps = 50/412 (12%)
Query: 7 NNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAF 66
NN F+ L Y M+ N +T+P VLKAC++ + +G +VH+H++K G D
Sbjct: 116 NNEPFKAIL-LYYEMVVAHSRPNKYTYPAVLKACSDSGVVAEGVQVHAHLVKHGLGGDGH 174
Query: 67 VQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWV 126
+ + I MY+ V +R++LD+ + V WN++I + R
Sbjct: 175 ILSSAIRMYASFGRLVEARRILDDKGGEV-DAVCWNAMIDGYLR---------------- 217
Query: 127 LGLELSASTFVSVVSGCSFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARS 186
F V + +G+ + I N+++S +++ G V AR
Sbjct: 218 ---------FGEVEAARELFEGMPD----------RSMISTWNAMISGFSRCGMVEVARE 258
Query: 187 IFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGN 246
FDE+ E +SW+ +I GY+ G EA + +QM++ + P V +++ CA +G
Sbjct: 259 FFDEMKERDEISWSAMIDGYIQEGCFMEALEIFHQMQKEKIRPRKFVLPSVLSACANLGA 318
Query: 247 LFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGG 306
L +H+ ++ + L LV MY KCG ++LA VF+ + K V W +MIGG
Sbjct: 319 LDQGRWIHTYAKRNSIQLDGVLGTSLVDMYAKCGRIDLAWEVFEKMSNKEVSSWNAMIGG 378
Query: 307 YAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEI-----EEYIVLN 361
A G +A++LF ++ + PNE T L+ACA G + KG I +EY
Sbjct: 379 LAMHGRAEDAIDLFSKM---DIYPNEITFVGVLNACAHGGLVQKGLTIFNSMRKEY---- 431
Query: 362 GLESNRQVQTSLIHMFSKCGRINKAKEVFERVP-DKDLAVWSAMINGYAIHG 412
G+E + ++ + + G + +A++V +P + AVW A++ HG
Sbjct: 432 GVEPQIEHYGCIVDLLGRAGLLTEAEKVVSSIPTEPTPAVWGALLGACRKHG 483
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 105/220 (47%), Gaps = 16/220 (7%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI G F E L + M + + F P VL ACAN+ ++ G+ +H++ +
Sbjct: 274 MIDGYIQEGCFMEALEIFHQMQKEKIRPRKFVLPSVLSACANLGALDQGRWIHTYAKRNS 333
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISA---HSRACLNDEA 117
Q D + T L+DMY+KC + +V ++M + V SWN++I H RA ++A
Sbjct: 334 IQLDGVLGTSLVDMYAKCGRIDLAWEVFEKMSN--KEVSSWNAMIGGLAMHGRA---EDA 388
Query: 118 ILVLKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMS 173
I + +M + E+ TFV V++ C+ ++G+++ + K + +I ++
Sbjct: 389 IDLFSKMDIYPNEI---TFVGVLNACAHGGLVQKGLTIFNSMRKEYGVEPQIEHYGCIVD 445
Query: 174 MYAKFGKVNEARSIFDEI-GETSIVSWTTIIGGYVNVGNV 212
+ + G + EA + I E + W ++G GNV
Sbjct: 446 LLGRAGLLTEAEKVVSSIPTEPTPAVWGALLGACRKHGNV 485
>gi|224087027|ref|XP_002308034.1| predicted protein [Populus trichocarpa]
gi|222854010|gb|EEE91557.1| predicted protein [Populus trichocarpa]
Length = 599
Score = 347 bits (891), Expect = 9e-93, Method: Compositional matrix adjust.
Identities = 194/601 (32%), Positives = 332/601 (55%), Gaps = 6/601 (0%)
Query: 21 MLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSD 80
M + G N T ++L+AC++I + G+++H V+K GF+++ FV T LI MYS+ +
Sbjct: 1 MCEFGEKFNEHTCVVILQACSDIGDVVLGEQIHGFVIKSGFEENVFVGTSLISMYSRSGN 60
Query: 81 FVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVV 140
F + KV + V + + N +I + +A AI V + +GL+ + TF +++
Sbjct: 61 FDEAEKVFN--GVGCKDLRCLNCMILEYGKAGYEKRAIGVFIYLISVGLDPNDYTFTNII 118
Query: 141 SGCSFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWT 200
S C+ +G +H K G+L + + N+V++MY K G V EA +F + + +++SWT
Sbjct: 119 STCNVEEGKQLHGLAVKYGVLL-QTSVGNAVITMYGKNGMVEEAARMFSVMNKKNLISWT 177
Query: 201 TIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKS 260
+I GY G +A ++R V D + ++ GC++ NL L +H L++K
Sbjct: 178 ALISGYTRNGYGEKAVDGFLELRGCGVECDSGLLATILDGCSECKNLDLGTQIHGLVIKL 237
Query: 261 GYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLF 320
GY + + L+ +Y KC + + AR VF+ + +S + +++ G+ + E +F
Sbjct: 238 GYPCDINIGTALIDLYAKCKNFQSARTVFNGLSPRSTASFNAILVGFIENDSNEEDPMVF 297
Query: 321 KRLLK-TSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSK 379
L+ ++P+ + + LS A SL KG+ + Y + G + V +LI M++K
Sbjct: 298 LSQLRLAGIKPDSVSFSRLLSLSANRASLVKGRGLHAYSIKTGFAGHISVSNALITMYAK 357
Query: 380 CGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTS 439
CG + A + F + D W+A+I+ Y++HG G++AL L+ +M+ +G PD +
Sbjct: 358 CGIVEDAYQAFNSMSANDCISWNAIISAYSLHGQGEKALLLYQEMEE-KGFTPDEITILV 416
Query: 440 ILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVE 499
IL AC++SG+ +DGL F +M+S +GI+P +EHY C+VDLLGRAG A+ I+ P
Sbjct: 417 ILQACTYSGLSEDGLHLFNTMESKYGIQPLLEHYACMVDLLGRAGYLSQAMDIINRSPFS 476
Query: 500 VQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATAR 559
+W L++ C ++ LG+ A+K+LL L+P G+Y+L++N++ GM EA+ R
Sbjct: 477 ESTLLWRTLVNVCKLCGDLNLGKLASKHLLDLSPDEAGSYVLVSNIYAGEGMIDEASKVR 536
Query: 560 GLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKELHIKLLEAGYIAEAD 619
M D +L+KE G S VEID V FVA H S++I L L + + Y ++AD
Sbjct: 537 TTMKDLKLSKEAGSSWVEIDNMVHYFVASGTDHPESIEIYARLDLLRNE-MRGIYDSKAD 595
Query: 620 I 620
+
Sbjct: 596 L 596
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 108/409 (26%), Positives = 193/409 (47%), Gaps = 52/409 (12%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+I T NG E+ + + + GV +S +L C+ ++ G ++H V+K+G
Sbjct: 179 LISGYTRNGYGEKAVDGFLELRGCGVECDSGLLATILDGCSECKNLDLGTQIHGLVIKLG 238
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+ D + T LID+Y+KC +F S+R V + + RS S+N+I+ N+E +V
Sbjct: 239 YPCDINIGTALIDLYAKCKNFQSARTVFNGLSP--RSTASFNAILVGFIENDSNEEDPMV 296
Query: 121 -LKEMWVLGLELSASTFVSVVSGCSFR----QGISMHCCVYKLGLLNNEIPLANSVMSMY 175
L ++ + G++ + +F ++S + R +G +H K G + I ++N++++MY
Sbjct: 297 FLSQLRLAGIKPDSVSFSRLLSLSANRASLVKGRGLHAYSIKTGFAGH-ISVSNALITMY 355
Query: 176 AKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFL 235
AK G V +A F+ + +SW II Y G +A L +M TPD + L
Sbjct: 356 AKCGIVEDAYQAFNSMSANDCISWNAIISAYSLHGQGEKALLLYQEMEEKGFTPDEITIL 415
Query: 236 NLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEK 295
++ C G LS ED L +L +M +K G +LE
Sbjct: 416 VILQACTYSG-----LS------------EDGL-HLFNTMESKYG--------IQPLLEH 449
Query: 296 SVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRP-NEATL--ATTLSACAELGSLSKGK 352
+ M+ + GY S+A+++ R P +E+TL T ++ C G L+ GK
Sbjct: 450 ----YACMVDLLGRAGYLSQAMDIINR------SPFSESTLLWRTLVNVCKLCGDLNLGK 499
Query: 353 EIEEYIV-LNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAV 400
++++ L+ E+ V S ++++ G I++A +V R KDL +
Sbjct: 500 LASKHLLDLSPDEAGSYVLVS--NIYAGEGMIDEASKV--RTTMKDLKL 544
>gi|116310835|emb|CAH67622.1| OSIGBa0140J09.3 [Oryza sativa Indica Group]
Length = 1027
Score = 347 bits (891), Expect = 9e-93, Method: Compositional matrix adjust.
Identities = 195/612 (31%), Positives = 332/612 (54%), Gaps = 11/612 (1%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
M+ N EE + + M++ + + FTF +L AC ++S + GK+VH +K
Sbjct: 397 MLTGFVQNELPEEAIRMFQYMMRYTLQTDEFTFVSILGACTYLSSFYLGKQVHCVTIKNC 456
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
FV +DMYSK ++ + +P + +SWN++ ++ +EA+ +
Sbjct: 457 MDISLFVANATLDMYSKYGAIGDAKALFSLIP--YKDSISWNALTVGLAQNLEEEEAVCM 514
Query: 121 LKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
LK M + G+ +F + ++ CS G +HC K G+ +N + +S++ +Y+
Sbjct: 515 LKRMRLHGITPDDVSFSTAINACSNIRATETGKQIHCLAIKYGICSNH-AVGSSLIDLYS 573
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K G V +R IF ++ +SIV +I G+V N +EA L Q+ + + P V F +
Sbjct: 574 KHGDVESSRKIFAQVDASSIVPINALIAGFVQNNNEDEAIQLFQQVLKDGLKPSSVTFSS 633
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNL-LVSMYTKCGDLELARRVFDAVLE- 294
++ GC+ N + +H LKSG +D L + L +Y K LE A ++ + +
Sbjct: 634 ILSGCSGSLNSAIGKQVHCYTLKSGVLYDDTLLGVSLAGIYLKSKMLEDANKLLTEMPDH 693
Query: 295 KSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEI 354
K++F WT++I GYAQ GY ++ F R+ +VR +EAT A+ L AC+++ + + GKEI
Sbjct: 694 KNLFEWTAIISGYAQNGYGDHSLVSFWRMRHCNVRSDEATFASVLKACSDVTAFADGKEI 753
Query: 355 EEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDK-DLAVWSAMINGYAIHGM 413
I +G S ++LI M+SKCG + + E F+ + +K D+ W++MI G+A +G
Sbjct: 754 HGLITKSGFGSYETATSALIDMYSKCGDVISSFEAFKELKNKQDIMPWNSMIVGFAKNGY 813
Query: 414 GDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHY 473
D+AL LF KM+ ++ +KPD V + +L AC+HSG++ +G FF M+ +G+ P ++HY
Sbjct: 814 ADEALLLFQKMEELQ-IKPDEVTFLGVLIACTHSGLISEGRHFFGPMRKVYGLTPRLDHY 872
Query: 474 LCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNP 533
C +DLLGR G A + I ++P VWA L+AC H + E G+ AA+ L+ L P
Sbjct: 873 ACFIDLLGRGGHLQEAQEAIDQLPFRPDGVVWATYLAACRMHKDEERGKIAARKLVELEP 932
Query: 534 GSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHH 593
+ Y+L+++L + G W EA R M ++ + K PG S + + +F+ D+ H
Sbjct: 933 QYSSTYVLLSSLHAATGNWAEAKVTRESMREKGVAKFPGCSWITVGNKTSLFLVQDKYHP 992
Query: 594 LSVDIRKTLKEL 605
++ I + L +L
Sbjct: 993 DNLRIYEMLGDL 1004
Score = 207 bits (528), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 138/504 (27%), Positives = 254/504 (50%), Gaps = 17/504 (3%)
Query: 15 LSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDM 74
L Y M G+ TF +L A AN+ + +G+++H+ + G + FV + LI++
Sbjct: 310 LGLYKDMRSWGLWPTRSTFASMLSAAANMKAFVEGQQMHAAAVMHGLDANVFVGSSLINL 369
Query: 75 YSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSAS 134
Y+KC ++ V D +++V WN++++ + L +EAI + + M L+
Sbjct: 370 YAKCGCPSDAKNVFDLSCE--KNIVMWNAMLTGFVQNELPEEAIRMFQYMMRYTLQTDEF 427
Query: 135 TFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDE 190
TFVS++ C SF G +HC K ++ + +AN+ + MY+K+G + +A+++F
Sbjct: 428 TFVSILGACTYLSSFYLGKQVHCVTIK-NCMDISLFVANATLDMYSKYGAIGDAKALFSL 486
Query: 191 IGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLA 250
I +SW + G EA + +MR +TPD V F I C+ +
Sbjct: 487 IPYKDSISWNALTVGLAQNLEEEEAVCMLKRMRLHGITPDDVSFSTAINACSNIRATETG 546
Query: 251 LSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQL 310
+H L +K G + + + L+ +Y+K GD+E +R++F V S+ ++I G+ Q
Sbjct: 547 KQIHCLAIKYGICSNHAVGSSLIDLYSKHGDVESSRKIFAQVDASSIVPINALIAGFVQN 606
Query: 311 GYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSK--GKEIEEYIVLNG-LESNR 367
EA+ LF+++LK ++P+ T ++ LS C+ GSL+ GK++ Y + +G L +
Sbjct: 607 NNEDEAIQLFQQVLKDGLKPSSVTFSSILSGCS--GSLNSAIGKQVHCYTLKSGVLYDDT 664
Query: 368 QVQTSLIHMFSKCGRINKAKEVFERVPD-KDLAVWSAMINGYAIHGMGDQALNLFYKMQH 426
+ SL ++ K + A ++ +PD K+L W+A+I+GYA +G GD +L F++M+H
Sbjct: 665 LLGVSLAGIYLKSKMLEDANKLLTEMPDHKNLFEWTAIISGYAQNGYGDHSLVSFWRMRH 724
Query: 427 VEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSM-QSNFGIEPSIEHYLCLVDLLGRAGR 485
++ D + S+L ACS DG + +S FG + L+D+ + G
Sbjct: 725 CN-VRSDEATFASVLKACSDVTAFADGKEIHGLITKSGFGSYETATS--ALIDMYSKCGD 781
Query: 486 FDLALKTIHEMPVEVQAQVWAPLL 509
+ + E+ + W ++
Sbjct: 782 VISSFEAFKELKNKQDIMPWNSMI 805
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 124/497 (24%), Positives = 234/497 (47%), Gaps = 47/497 (9%)
Query: 6 TNNGSFEETLSTYSSMLQT-GVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQD 64
+GS + L + + T G + F +VL AC+ + + G++VH V+K GF
Sbjct: 133 ARSGSPGDVLGAFRYIRCTAGGRPDQFGLAVVLSACSRVGVLAYGRQVHCDVVKSGFSSS 192
Query: 65 AFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEM 124
F + L+DMY+KC D ++R+V D + + W+S+I+ + R EA+ + M
Sbjct: 193 VFCEAALVDMYAKCGDVPNARRVFDG--IACPDTICWSSMIACYHRVGCYQEALALFSRM 250
Query: 125 WVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEA 184
+G T V+++S LA+S G+++ A
Sbjct: 251 DKMGSAPDQVTLVTIIS------------------------TLASS--------GRLDHA 278
Query: 185 RSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQV 244
++ ++ S V+W +I G+ G GL MR + P F +++ A +
Sbjct: 279 TALLKKMPTPSTVAWNAVISGHAQSGLEFNVLGLYKDMRSWGLWPTRSTFASMLSAAANM 338
Query: 245 GNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMI 304
MH+ + G + + + L+++Y KCG A+ VFD EK++ +W +M+
Sbjct: 339 KAFVEGQQMHAAAVMHGLDANVFVGSSLINLYAKCGCPSDAKNVFDLSCEKNIVMWNAML 398
Query: 305 GGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLE 364
G+ Q P EA+ +F+ +++ +++ +E T + L AC L S GK++ + N ++
Sbjct: 399 TGFVQNELPEEAIRMFQYMMRYTLQTDEFTFVSILGACTYLSSFYLGKQVHCVTIKNCMD 458
Query: 365 SNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKM 424
+ V + + M+SK G I AK +F +P KD W+A+ G A + ++A+ + +M
Sbjct: 459 ISLFVANATLDMYSKYGAIGDAKALFSLIPYKDSISWNALTVGLAQNLEEEEAVCMLKRM 518
Query: 425 QHVEGLKPDAVVYTSILSACSHSGMVDDG-----LSFFKSMQSNFGIEPSIEHYLCLVDL 479
+ + G+ PD V +++ ++ACS+ + G L+ + SN + S L+DL
Sbjct: 519 R-LHGITPDDVSFSTAINACSNIRATETGKQIHCLAIKYGICSNHAVGSS------LIDL 571
Query: 480 LGRAGRFDLALKTIHEM 496
+ G + + K ++
Sbjct: 572 YSKHGDVESSRKIFAQV 588
Score = 172 bits (436), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 111/398 (27%), Positives = 209/398 (52%), Gaps = 8/398 (2%)
Query: 54 SHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACL 113
S + K+G D +I + + +L +MP S V+WN++IS H+++ L
Sbjct: 248 SRMDKMGSAPDQVTLVTIISTLASSGRLDHATALLKKMPTP--STVAWNAVISGHAQSGL 305
Query: 114 NDEAILVLKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLAN 169
+ + K+M GL + STF S++S + F +G MH GL N + + +
Sbjct: 306 EFNVLGLYKDMRSWGLWPTRSTFASMLSAAANMKAFVEGQQMHAAAVMHGLDAN-VFVGS 364
Query: 170 SVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTP 229
S++++YAK G ++A+++FD E +IV W ++ G+V EA + M R ++
Sbjct: 365 SLINLYAKCGCPSDAKNVFDLSCEKNIVMWNAMLTGFVQNELPEEAIRMFQYMMRYTLQT 424
Query: 230 DLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVF 289
D F++++ C + + +L +H + +K+ + + N + MY+K G + A+ +F
Sbjct: 425 DEFTFVSILGACTYLSSFYLGKQVHCVTIKNCMDISLFVANATLDMYSKYGAIGDAKALF 484
Query: 290 DAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLS 349
+ K W ++ G AQ EAV + KR+ + P++ + +T ++AC+ + +
Sbjct: 485 SLIPYKDSISWNALTVGLAQNLEEEEAVCMLKRMRLHGITPDDVSFSTAINACSNIRATE 544
Query: 350 KGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYA 409
GK+I + G+ SN V +SLI ++SK G + ++++F +V + +A+I G+
Sbjct: 545 TGKQIHCLAIKYGICSNHAVGSSLIDLYSKHGDVESSRKIFAQVDASSIVPINALIAGFV 604
Query: 410 IHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHS 447
+ D+A+ LF ++ +GLKP +V ++SILS CS S
Sbjct: 605 QNNNEDEAIQLFQQVLK-DGLKPSSVTFSSILSGCSGS 641
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 89/361 (24%), Positives = 162/361 (44%), Gaps = 42/361 (11%)
Query: 167 LANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMR-RM 225
L +S++ +Y K G+V A S GE + + ++++ + G+ + G +R
Sbjct: 93 LGDSLVELYCKSGRVGYAWSALGYAGERASGAASSLLSCHARSGSPGDVLGAFRYIRCTA 152
Query: 226 SVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELA 285
PD ++ C++VG L +H ++KSG+++ + LV MY KCGD+ A
Sbjct: 153 GGRPDQFGLAVVLSACSRVGVLAYGRQVHCDVVKSGFSSSVFCEAALVDMYAKCGDVPNA 212
Query: 286 RRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAEL 345
RRVFD + W+SMI Y ++G EA+ LF R+ K P++ TL T +S A
Sbjct: 213 RRVFDGIACPDTICWSSMIACYHRVGCYQEALALFSRMDKMGSAPDQVTLVTIISTLAS- 271
Query: 346 GSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMI 405
GR++ A + +++P W+A+I
Sbjct: 272 ----------------------------------SGRLDHATALLKKMPTPSTVAWNAVI 297
Query: 406 NGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFG 465
+G+A G+ L L+ M+ GL P + S+LSA ++ +G + + G
Sbjct: 298 SGHAQSGLEFNVLGLYKDMRSW-GLWPTRSTFASMLSAAANMKAFVEGQQMHAAAVMH-G 355
Query: 466 IEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAA 525
++ ++ L++L + G A K + ++ E +W +L+ +++ EL E A
Sbjct: 356 LDANVFVGSSLINLYAKCGCPSDA-KNVFDLSCEKNIVMWNAMLTGFVQN---ELPEEAI 411
Query: 526 K 526
+
Sbjct: 412 R 412
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 111/212 (52%), Gaps = 2/212 (0%)
Query: 252 SMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLG 311
++H +L+ G L + LV +Y K G + A E++ +S++ +A+ G
Sbjct: 77 ALHGRILRGGSPLLGRLGDSLVELYCKSGRVGYAWSALGYAGERASGAASSLLSCHARSG 136
Query: 312 YPSEAVNLFKRLLKTSV-RPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQ 370
P + + F+ + T+ RP++ LA LSAC+ +G L+ G+++ +V +G S+ +
Sbjct: 137 SPGDVLGAFRYIRCTAGGRPDQFGLAVVLSACSRVGVLAYGRQVHCDVVKSGFSSSVFCE 196
Query: 371 TSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGL 430
+L+ M++KCG + A+ VF+ + D WS+MI Y G +AL LF +M + G
Sbjct: 197 AALVDMYAKCGDVPNARRVFDGIACPDTICWSSMIACYHRVGCYQEALALFSRMDKM-GS 255
Query: 431 KPDAVVYTSILSACSHSGMVDDGLSFFKSMQS 462
PD V +I+S + SG +D + K M +
Sbjct: 256 APDQVTLVTIISTLASSGRLDHATALLKKMPT 287
>gi|357464699|ref|XP_003602631.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355491679|gb|AES72882.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 705
Score = 347 bits (891), Expect = 9e-93, Method: Compositional matrix adjust.
Identities = 209/662 (31%), Positives = 331/662 (50%), Gaps = 73/662 (11%)
Query: 29 NSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVL 88
+S F +L C S+++ + VH+ ++K F + F+Q L+D+Y KC +RKV
Sbjct: 18 DSSPFAKLLDTCVKSKSVFEARLVHARIIKTQFSSEIFIQNRLVDVYGKCGFLEDARKVF 77
Query: 89 DEMPVR-----------------------------LRSVVSWNSIISAHSRACLNDEAIL 119
D M R R SWN+++S ++ +EA+
Sbjct: 78 DHMQQRNTFSWNAVLGALTKFGALDEALNLFKCMPERDQCSWNAMVSGFAQRDRFEEALR 137
Query: 120 VLKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMY 175
+ +M L+ +F S +S C+ G+ +H + K + ++ + ++++ MY
Sbjct: 138 FVVDMHSEDFVLNEYSFGSALSACAGLMDLSIGVQIHGLIAK-SRYSLDVYMGSALVDMY 196
Query: 176 AKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFL 235
+K V A+ FD++ +IVSW ++I Y G +A + +M + PD +
Sbjct: 197 SKCRVVASAQRAFDDMDVRNIVSWNSLITCYEQNGPAGKALEVFVRMMNCGIEPDEITLA 256
Query: 236 NLILGCAQVGNLFLALSMHSLLLK-SGYNNEDPLDNLLVSMYTKCGDLELARRVFDA--- 291
++ CA + + L +H+ ++K Y N+ L N LV MY KC + AR VFD
Sbjct: 257 SVASACASLSAIREGLQIHARVMKHDKYRNDLVLGNALVDMYAKCRRVNEARLVFDRMPL 316
Query: 292 ----------------------------VLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRL 323
++E++V W ++I GY Q G EAV LF L
Sbjct: 317 RDVVSETSMVSGYAKASSVKAARLMFSNMMERNVVSWNALIAGYTQNGENEEAVRLFLLL 376
Query: 324 LKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGL------ESNRQVQTSLIHMF 377
+ S+ P T L+ACA L L G++ +I+ +G +S+ V SLI M+
Sbjct: 377 KRESIWPTHYTFGNLLNACANLADLKLGRQAHTHILKHGFWFKSGEDSDIFVGNSLIDMY 436
Query: 378 SKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVY 437
KCG + + VFER+ ++D W+AMI GYA +G G +AL +F +M V G +PD V
Sbjct: 437 MKCGLVEDGRLVFERMLERDNVSWNAMIVGYAQNGYGTEALEIFREML-VSGERPDHVTM 495
Query: 438 TSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMP 497
+LSACSH+G+V++G +F+SM G+ P +HY C+VDLLGRAG D A I MP
Sbjct: 496 IGVLSACSHAGLVEEGRCYFQSMTIEHGLVPVKDHYTCMVDLLGRAGCLDEANNLIQTMP 555
Query: 498 VEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAAT 557
+E A VW LL+AC H N+ LG+Y A+ LL ++P ++G Y+L++N++ G WK+
Sbjct: 556 MEPDAVVWGSLLAACKVHGNITLGKYVAERLLEIDPLNSGPYVLLSNMYAELGRWKDVVR 615
Query: 558 ARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKELHIKLLEAGYIAE 617
R M + K+PG S + I + VF+ D+ H DI LK L ++ GY+ E
Sbjct: 616 VRKQMRQMGVIKQPGCSWISIQSHLHVFMVKDKRHPHKKDIYLILKILTEQMKRVGYVPE 675
Query: 618 AD 619
AD
Sbjct: 676 AD 677
Score = 220 bits (560), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 138/455 (30%), Positives = 226/455 (49%), Gaps = 45/455 (9%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
M+ FEE L M N ++F L ACA + + G ++H + K
Sbjct: 122 MVSGFAQRDRFEEALRFVVDMHSEDFVLNEYSFGSALSACAGLMDLSIGVQIHGLIAKSR 181
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+ D ++ + L+DMYSKC S+++ D+M VR ++VSWNS+I+ + + +A+ V
Sbjct: 182 YSLDVYMGSALVDMYSKCRVVASAQRAFDDMDVR--NIVSWNSLITCYEQNGPAGKALEV 239
Query: 121 LKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
M G+E T SV S C+ R+G+ +H V K N++ L N+++ MYA
Sbjct: 240 FVRMMNCGIEPDEITLASVASACASLSAIREGLQIHARVMKHDKYRNDLVLGNALVDMYA 299
Query: 177 KFGKVNEARSIFDE------IGETS-------------------------IVSWTTIIGG 205
K +VNEAR +FD + ETS +VSW +I G
Sbjct: 300 KCRRVNEARLVFDRMPLRDVVSETSMVSGYAKASSVKAARLMFSNMMERNVVSWNALIAG 359
Query: 206 YVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGY--- 262
Y G EA L ++R S+ P F NL+ CA + +L L H+ +LK G+
Sbjct: 360 YTQNGENEEAVRLFLLLKRESIWPTHYTFGNLLNACANLADLKLGRQAHTHILKHGFWFK 419
Query: 263 NNEDP---LDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNL 319
+ ED + N L+ MY KCG +E R VF+ +LE+ W +MI GYAQ GY +EA+ +
Sbjct: 420 SGEDSDIFVGNSLIDMYMKCGLVEDGRLVFERMLERDNVSWNAMIVGYAQNGYGTEALEI 479
Query: 320 FKRLLKTSVRPNEATLATTLSACAELGSLSKGK-EIEEYIVLNGLESNRQVQTSLIHMFS 378
F+ +L + RP+ T+ LSAC+ G + +G+ + + +GL + T ++ +
Sbjct: 480 FREMLVSGERPDHVTMIGVLSACSHAGLVEEGRCYFQSMTIEHGLVPVKDHYTCMVDLLG 539
Query: 379 KCGRINKAKEVFERVP-DKDLAVWSAMINGYAIHG 412
+ G +++A + + +P + D VW +++ +HG
Sbjct: 540 RAGCLDEANNLIQTMPMEPDAVVWGSLLAACKVHG 574
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 93/363 (25%), Positives = 180/363 (49%), Gaps = 42/363 (11%)
Query: 131 LSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARS 186
L +S F ++ C S + +H + K ++EI + N ++ +Y K G + +AR
Sbjct: 17 LDSSPFAKLLDTCVKSKSVFEARLVHARIIKTQF-SSEIFIQNRLVDVYGKCGFLEDARK 75
Query: 187 IFDEIGETSIVSWTTIIGGYVNVGNVNEAFGL---------CN---------QMRRMSVT 228
+FD + + + SW ++G G ++EA L C+ Q R
Sbjct: 76 VFDHMQQRNTFSWNAVLGALTKFGALDEALNLFKCMPERDQCSWNAMVSGFAQRDRFEEA 135
Query: 229 PDLVV-------------FLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSM 275
VV F + + CA + +L + + +H L+ KS Y+ + + + LV M
Sbjct: 136 LRFVVDMHSEDFVLNEYSFGSALSACAGLMDLSIGVQIHGLIAKSRYSLDVYMGSALVDM 195
Query: 276 YTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATL 335
Y+KC + A+R FD + +++ W S+I Y Q G +A+ +F R++ + P+E TL
Sbjct: 196 YSKCRVVASAQRAFDDMDVRNIVSWNSLITCYEQNGPAGKALEVFVRMMNCGIEPDEITL 255
Query: 336 ATTLSACAELGSLSKGKEIEEYIVLNGLESNRQV-QTSLIHMFSKCGRINKAKEVFERVP 394
A+ SACA L ++ +G +I ++ + N V +L+ M++KC R+N+A+ VF+R+P
Sbjct: 256 ASVASACASLSAIREGLQIHARVMKHDKYRNDLVLGNALVDMYAKCRRVNEARLVFDRMP 315
Query: 395 DKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGL 454
+D+ ++M++GYA A +F M ++ + V + ++++ + +G ++ +
Sbjct: 316 LRDVVSETSMVSGYAKASSVKAARLMFSNM-----MERNVVSWNALIAGYTQNGENEEAV 370
Query: 455 SFF 457
F
Sbjct: 371 RLF 373
>gi|334185017|ref|NP_186807.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546765|sp|Q9SS97.2|PP205_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g01580
gi|332640170|gb|AEE73691.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 660
Score = 347 bits (891), Expect = 9e-93, Method: Compositional matrix adjust.
Identities = 200/619 (32%), Positives = 318/619 (51%), Gaps = 12/619 (1%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLK-V 59
++++ + +EE L +S M + ++FT P+ LKAC + + G+ +H V K V
Sbjct: 31 LLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKACGELREVNYGEMIHGFVKKDV 90
Query: 60 GFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAIL 119
D +V + LI MY KC + + ++ DE+ +V+W+S++S + +A+
Sbjct: 91 TLGSDLYVGSSLIYMYIKCGRMIEALRMFDEL--EKPDIVTWSSMVSGFEKNGSPYQAVE 148
Query: 120 VLKEMWVLGLELSAS--TFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMS 173
+ M V+ +++ T +++VS C+ R G +H V + G +N++ L NS+++
Sbjct: 149 FFRRM-VMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIRRGF-SNDLSLVNSLLN 206
Query: 174 MYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVV 233
YAK EA ++F I E ++SW+T+I YV G EA + N M P++
Sbjct: 207 CYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLVFNDMMDDGTEPNVAT 266
Query: 234 FLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVL 293
L ++ CA +L H L ++ G E + LV MY KC E A VF +
Sbjct: 267 VLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAVFSRIP 326
Query: 294 EKSVFLWTSMIGGYAQLGYPSEAVNLFK-RLLKTSVRPNEATLATTLSACAELGSLSKGK 352
K V W ++I G+ G ++ F LL+ + RP+ + L +C+ELG L + K
Sbjct: 327 RKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMVKVLGSCSELGFLEQAK 386
Query: 353 EIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHG 412
Y++ G +SN + SL+ ++S+CG + A +VF + KD VW+++I GY IHG
Sbjct: 387 CFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGIALKDTVVWTSLITGYGIHG 446
Query: 413 MGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEH 472
G +AL F M +KP+ V + SILSACSH+G++ +GL FK M +++ + P++EH
Sbjct: 447 KGTKALETFNHMVKSSEVKPNEVTFLSILSACSHAGLIHEGLRIFKLMVNDYRLAPNLEH 506
Query: 473 YLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLN 532
Y LVDLLGR G D A++ MP Q+ LL AC H N E+ E AK L L
Sbjct: 507 YAVLVDLLGRVGDLDTAIEITKRMPFSPTPQILGTLLGACRIHQNGEMAETVAKKLFELE 566
Query: 533 PGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSH 592
G Y+LM+N++ G W+ R + R + K S +EI V FVA D H
Sbjct: 567 SNHAGYYMLMSNVYGVKGEWENVEKLRNSVKQRGIKKGLAESLIEIRRKVHRFVADDELH 626
Query: 593 HLSVDIRKTLKELHIKLLE 611
+ LKEL + + E
Sbjct: 627 PEKEPVYGLLKELDLHMKE 645
Score = 122 bits (306), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 92/383 (24%), Positives = 176/383 (45%), Gaps = 14/383 (3%)
Query: 172 MSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDL 231
M KF +AR +F E+ + S+ W T++ E + M R PD
Sbjct: 1 MGFCRKFSSSVDARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDN 60
Query: 232 VVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNED-PLDNLLVSMYTKCGDLELARRVFD 290
+ C ++ + +H + K D + + L+ MY KCG + A R+FD
Sbjct: 61 FTLPVALKACGELREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFD 120
Query: 291 AVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTS-VRPNEATLATTLSACAELGSLS 349
+ + + W+SM+ G+ + G P +AV F+R++ S V P+ TL T +SAC +L +
Sbjct: 121 ELEKPDIVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSR 180
Query: 350 KGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYA 409
G+ + +++ G ++ + SL++ ++K +A +F+ + +KD+ WS +I Y
Sbjct: 181 LGRCVHGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYV 240
Query: 410 IHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPS 469
+G +AL +F M +G +P+ +L AC+ + ++ G + + G+E
Sbjct: 241 QNGAAAEALLVFNDMMD-DGTEPNVATVLCVLQACAAAHDLEQGRKTHE-LAIRKGLETE 298
Query: 470 IEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSAC----MKHHNVELGEYAA 525
++ LVD+ + + A +P + W L+S M H ++E E++
Sbjct: 299 VKVSTALVDMYMKCFSPEEAYAVFSRIPRK-DVVSWVALISGFTLNGMAHRSIE--EFS- 354
Query: 526 KNLLTLNPGSTGNYILMANLFTS 548
++ L + + ILM + S
Sbjct: 355 --IMLLENNTRPDAILMVKVLGS 375
>gi|15231798|ref|NP_190904.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174119|sp|Q9LFI1.1|PP280_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g53360, mitochondrial; Flags: Precursor
gi|6729487|emb|CAB67643.1| putative protein [Arabidopsis thaliana]
gi|332645554|gb|AEE79075.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 768
Score = 347 bits (891), Expect = 9e-93, Method: Compositional matrix adjust.
Identities = 204/619 (32%), Positives = 333/619 (53%), Gaps = 14/619 (2%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+I + NG E + Y MLQ + + F F ++KACA+ + + GK++H+ V+K+
Sbjct: 139 VITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGKQLHAQVIKLE 198
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
Q LI MY + + + +V +P ++ ++SW+SII+ S+ EA+
Sbjct: 199 SSSHLIAQNALIAMYVRFNQMSDASRVFYGIP--MKDLISWSSIIAGFSQLGFEFEALSH 256
Query: 121 LKEMWVLGL-ELSASTFVSVVSGCS--FRQ--GISMHCCVYKLGLLNNEIPLANSVMSMY 175
LKEM G+ + F S + CS R G +H K L N I S+ MY
Sbjct: 257 LKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAIA-GCSLCDMY 315
Query: 176 AKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFL 235
A+ G +N AR +FD+I SW II G N G +EA + +QMR PD +
Sbjct: 316 ARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLR 375
Query: 236 NLILGCAQVGNLFLA--LSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVL 293
+L+ CAQ + L+ + +HS ++K G+ + + N L++MYT C DL +F+
Sbjct: 376 SLL--CAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFR 433
Query: 294 EKSVFL-WTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGK 352
+ + W +++ Q P E + LFK +L + P+ T+ L C E+ SL G
Sbjct: 434 NNADSVSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGS 493
Query: 353 EIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHG 412
++ Y + GL + ++ LI M++KCG + +A+ +F+ + ++D+ WS +I GYA G
Sbjct: 494 QVHCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSMDNRDVVSWSTLIVGYAQSG 553
Query: 413 MGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEH 472
G++AL LF +M+ G++P+ V + +L+ACSH G+V++GL + +MQ+ GI P+ EH
Sbjct: 554 FGEEALILFKEMKSA-GIEPNHVTFVGVLTACSHVGLVEEGLKLYATMQTEHGISPTKEH 612
Query: 473 YLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLN 532
C+VDLL RAGR + A + I EM +E VW LLSAC NV L + AA+N+L ++
Sbjct: 613 CSCVVDLLARAGRLNEAERFIDEMKLEPDVVVWKTLLSACKTQGNVHLAQKAAENILKID 672
Query: 533 PGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSH 592
P ++ ++L+ ++ S+G W+ AA R M + K PG S +EI+ + +F A D H
Sbjct: 673 PFNSTAHVLLCSMHASSGNWENAALLRSSMKKHDVKKIPGQSWIEIEDKIHIFFAEDIFH 732
Query: 593 HLSVDIRKTLKELHIKLLE 611
DI L + ++L+
Sbjct: 733 PERDDIYTVLHNIWSQMLD 751
Score = 169 bits (427), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 108/386 (27%), Positives = 191/386 (49%), Gaps = 8/386 (2%)
Query: 135 TFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDE 190
T++S++ CS QG +H + + I L N ++SMY K G + +AR +FD
Sbjct: 69 TYISLICACSSSRSLAQGRKIHDHILNSNCKYDTI-LNNHILSMYGKCGSLRDAREVFDF 127
Query: 191 IGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLA 250
+ E ++VS+T++I GY G EA L +M + + PD F ++I CA ++ L
Sbjct: 128 MPERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLG 187
Query: 251 LSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQL 310
+H+ ++K ++ N L++MY + + A RVF + K + W+S+I G++QL
Sbjct: 188 KQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQL 247
Query: 311 GYPSEAVNLFKRLLKTSV-RPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQV 369
G+ EA++ K +L V PNE ++L AC+ L G +I + + L N
Sbjct: 248 GFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAIA 307
Query: 370 QTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEG 429
SL M+++CG +N A+ VF+++ D A W+ +I G A +G D+A+++F +M+ G
Sbjct: 308 GCSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRS-SG 366
Query: 430 LKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLA 489
PDA+ S+L A + + G+ S +G + L+ +
Sbjct: 367 FIPDAISLRSLLCAQTKPMALSQGMQ-IHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCC 425
Query: 490 LKTIHEMPVEVQAQVWAPLLSACMKH 515
+ + W +L+AC++H
Sbjct: 426 FNLFEDFRNNADSVSWNTILTACLQH 451
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 120/446 (26%), Positives = 210/446 (47%), Gaps = 25/446 (5%)
Query: 5 STNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQD 64
+ N SF+ L TY S++ AC++ S+ G+++H H+L + D
Sbjct: 57 AQKNSSFKIRLRTYISLI---------------CACSSSRSLAQGRKIHDHILNSNCKYD 101
Query: 65 AFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEM 124
+ ++ MY KC +R+V D MP R++VS+ S+I+ +S+ EAI + +M
Sbjct: 102 TILNNHILSMYGKCGSLRDAREVFDFMPE--RNLVSYTSVITGYSQNGQGAEAIRLYLKM 159
Query: 125 WVLGLELSASTFVSVVSGCSFRQ----GISMHCCVYKLGLLNNEIPLANSVMSMYAKFGK 180
L F S++ C+ G +H V KL ++ I N++++MY +F +
Sbjct: 160 LQEDLVPDQFAFGSIIKACASSSDVGLGKQLHAQVIKLESSSHLIA-QNALIAMYVRFNQ 218
Query: 181 VNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSV-TPDLVVFLNLIL 239
+++A +F I ++SW++II G+ +G EA +M V P+ +F + +
Sbjct: 219 MSDASRVFYGIPMKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLK 278
Query: 240 GCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFL 299
C+ + +H L +KS L MY +CG L ARRVFD +
Sbjct: 279 ACSSLLRPDYGSQIHGLCIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQIERPDTAS 338
Query: 300 WTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIV 359
W +I G A GY EAV++F ++ + P+ +L + L A + +LS+G +I YI+
Sbjct: 339 WNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQIHSYII 398
Query: 360 LNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDK-DLAVWSAMINGYAIHGMGDQAL 418
G ++ V SL+ M++ C + +FE + D W+ ++ H + L
Sbjct: 399 KWGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNADSVSWNTILTACLQHEQPVEML 458
Query: 419 NLFYKMQHVEGLKPDAVVYTSILSAC 444
LF K+ V +PD + ++L C
Sbjct: 459 RLF-KLMLVSECEPDHITMGNLLRGC 483
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 70/232 (30%), Positives = 123/232 (53%), Gaps = 2/232 (0%)
Query: 214 EAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLV 273
EAF + S L +++LI C+ +L +H +L S + L+N ++
Sbjct: 52 EAFDFAQ--KNSSFKIRLRTYISLICACSSSRSLAQGRKIHDHILNSNCKYDTILNNHIL 109
Query: 274 SMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEA 333
SMY KCG L AR VFD + E+++ +TS+I GY+Q G +EA+ L+ ++L+ + P++
Sbjct: 110 SMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQF 169
Query: 334 TLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERV 393
+ + ACA + GK++ ++ S+ Q +LI M+ + +++ A VF +
Sbjct: 170 AFGSIIKACASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGI 229
Query: 394 PDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACS 445
P KDL WS++I G++ G +AL+ +M P+ ++ S L ACS
Sbjct: 230 PMKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACS 281
>gi|115464255|ref|NP_001055727.1| Os05g0455900 [Oryza sativa Japonica Group]
gi|53749358|gb|AAU90217.1| unknow protein [Oryza sativa Japonica Group]
gi|113579278|dbj|BAF17641.1| Os05g0455900 [Oryza sativa Japonica Group]
gi|222631826|gb|EEE63958.1| hypothetical protein OsJ_18783 [Oryza sativa Japonica Group]
Length = 874
Score = 347 bits (890), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 198/612 (32%), Positives = 336/612 (54%), Gaps = 22/612 (3%)
Query: 13 ETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLI 72
E ++ + M G+ N FTF VL A A+ ++ G+RVH+ +K G + FV L+
Sbjct: 184 EVMALFFRMRAEGIWPNPFTFASVLSAVASQGALDLGQRVHAQSVKFGCRSSVFVCNSLM 243
Query: 73 DMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELS 132
+MY+KC ++ V + M R +VSWN++++ EA+ + E +++
Sbjct: 244 NMYAKCGLVEDAKSVFNWMETR--DMVSWNTLMAGLQLNECELEALQLFHESRATMGKMT 301
Query: 133 ASTFVSVVSGCSFRQGISM----HCCVYKLGLLNNEIPLANSVMSM----YAKFGKVNEA 184
ST+ +V+ C+ + +++ H CV K G L +VM+ Y+K G++ +A
Sbjct: 302 QSTYATVIKLCANLKQLALARQLHSCVLKHGF-----HLTGNVMTALADAYSKCGELADA 356
Query: 185 RSIFD-EIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQ 243
+IF G ++VSWT II G + G++ A L ++MR V P+ + ++
Sbjct: 357 LNIFSMTTGSRNVVSWTAIISGCIQNGDIPLAVVLFSRMREDRVMPNEFTYSAMLKASLS 416
Query: 244 VGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSM 303
+ L +H+ ++K+ Y + + L++ Y+K G E A +F + +K V W++M
Sbjct: 417 I----LPPQIHAQVIKTNYQHIPFVGTALLASYSKFGSTEDALSIFKMIEQKDVVAWSAM 472
Query: 304 IGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACA-ELGSLSKGKEIEEYIVLNG 362
+ +AQ G A LF ++ ++PNE T+++ + ACA + +G++ +
Sbjct: 473 LSCHAQAGDCEGATYLFNKMAIQGIKPNEFTISSVIDACACPSAGVDQGRQFHAISIKYR 532
Query: 363 LESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFY 422
V ++L+ M+S+ G I+ A+ VFER D+DL W++MI+GYA HG +A+ F
Sbjct: 533 YHDAICVSSALVSMYSRKGNIDSAQIVFERQTDRDLVSWNSMISGYAQHGYSMKAIETFR 592
Query: 423 KMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGR 482
+M+ G++ D V + +++ C+H+G+V +G +F SM + I P++EHY C+VDL R
Sbjct: 593 QME-ASGIQMDGVTFLAVIMGCTHNGLVVEGQQYFDSMVRDHKINPTMEHYACMVDLYSR 651
Query: 483 AGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILM 542
AG+ D + I +MP A VW LL AC H NVELG+++A LL+L P + Y+L+
Sbjct: 652 AGKLDETMSLIRDMPFPAGAMVWRTLLGACRVHKNVELGKFSADKLLSLEPHDSSTYVLL 711
Query: 543 ANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTL 602
+N++ +AG WKE R LMD R++ KE G S ++I V F+A D+SH +S I K L
Sbjct: 712 SNIYAAAGKWKERDEVRKLMDYRKVKKEAGCSWIQIKNKVHSFIAFDKSHPMSDQIYKKL 771
Query: 603 KELHIKLLEAGY 614
K + +L + GY
Sbjct: 772 KVIITRLKQDGY 783
Score = 184 bits (468), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 149/517 (28%), Positives = 248/517 (47%), Gaps = 19/517 (3%)
Query: 7 NNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQ-DA 65
G E L +S + GV +S T VLKAC ++ G+++H +K G + +
Sbjct: 76 RRGMVLEVLDQFSVARRGGVLVDSATLSCVLKACRSVPDRVLGEQLHCLCVKCGHDRGEV 135
Query: 66 FVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMW 125
T L+DMY KC +V + MP ++VV+W S+++ + A ++ E + + M
Sbjct: 136 SAGTSLVDMYMKCGSVCEGIEVFEGMPK--KNVVTWTSLLTGCAHAQMHSEVMALFFRMR 193
Query: 126 VLGLELSASTFVSVVSGCSFRQGISM----HCCVYKLGLLNNEIPLANSVMSMYAKFGKV 181
G+ + TF SV+S + + + + H K G + + + NS+M+MYAK G V
Sbjct: 194 AEGIWPNPFTFASVLSAVASQGALDLGQRVHAQSVKFG-CRSSVFVCNSLMNMYAKCGLV 252
Query: 182 NEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGC 241
+A+S+F+ + +VSW T++ G EA L ++ R + +I C
Sbjct: 253 EDAKSVFNWMETRDMVSWNTLMAGLQLNECELEALQLFHESRATMGKMTQSTYATVIKLC 312
Query: 242 AQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVL-EKSVFLW 300
A + L LA +HS +LK G++ + L Y+KCG+L A +F ++V W
Sbjct: 313 ANLKQLALARQLHSCVLKHGFHLTGNVMTALADAYSKCGELADALNIFSMTTGSRNVVSW 372
Query: 301 TSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLS-KGKEIEEYIV 359
T++I G Q G AV LF R+ + V PNE T + L A SLS +I ++
Sbjct: 373 TAIISGCIQNGDIPLAVVLFSRMREDRVMPNEFTYSAMLKA-----SLSILPPQIHAQVI 427
Query: 360 LNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALN 419
+ V T+L+ +SK G A +F+ + KD+ WSAM++ +A G + A
Sbjct: 428 KTNYQHIPFVGTALLASYSKFGSTEDALSIFKMIEQKDVVAWSAMLSCHAQAGDCEGATY 487
Query: 420 LFYKMQHVEGLKPDAVVYTSILSACS-HSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVD 478
LF KM ++G+KP+ +S++ AC+ S VD G F ++ + +I LV
Sbjct: 488 LFNKMA-IQGIKPNEFTISSVIDACACPSAGVDQGRQ-FHAISIKYRYHDAICVSSALVS 545
Query: 479 LLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKH 515
+ R G D A + + E + W ++S +H
Sbjct: 546 MYSRKGNIDSA-QIVFERQTDRDLVSWNSMISGYAQH 581
Score = 131 bits (330), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 94/369 (25%), Positives = 178/369 (48%), Gaps = 7/369 (1%)
Query: 80 DFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSV 139
D +R LDE+P R + V N ++ ++R + E + G+ + ++T V
Sbjct: 47 DPPGARYPLDEIP-RRDAAVGANRVLFDYARRGMVLEVLDQFSVARRGGVLVDSATLSCV 105
Query: 140 VSGCSFRQ----GISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETS 195
+ C G +HC K G E+ S++ MY K G V E +F+ + + +
Sbjct: 106 LKACRSVPDRVLGEQLHCLCVKCGHDRGEVSAGTSLVDMYMKCGSVCEGIEVFEGMPKKN 165
Query: 196 IVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHS 255
+V+WT+++ G + +E L +MR + P+ F +++ A G L L +H+
Sbjct: 166 VVTWTSLLTGCAHAQMHSEVMALFFRMRAEGIWPNPFTFASVLSAVASQGALDLGQRVHA 225
Query: 256 LLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSE 315
+K G + + N L++MY KCG +E A+ VF+ + + + W +++ G E
Sbjct: 226 QSVKFGCRSSVFVCNSLMNMYAKCGLVEDAKSVFNWMETRDMVSWNTLMAGLQLNECELE 285
Query: 316 AVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIH 375
A+ LF T + ++T AT + CA L L+ +++ ++ +G V T+L
Sbjct: 286 ALQLFHESRATMGKMTQSTYATVIKLCANLKQLALARQLHSCVLKHGFHLTGNVMTALAD 345
Query: 376 MFSKCGRINKAKEVFERVP-DKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDA 434
+SKCG + A +F +++ W+A+I+G +G A+ LF +M+ + + P+
Sbjct: 346 AYSKCGELADALNIFSMTTGSRNVVSWTAIISGCIQNGDIPLAVVLFSRMRE-DRVMPNE 404
Query: 435 VVYTSILSA 443
Y+++L A
Sbjct: 405 FTYSAMLKA 413
Score = 105 bits (261), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 79/316 (25%), Positives = 149/316 (47%), Gaps = 20/316 (6%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+I NG + +S M + V N FT+ +LKA +I ++H+ V+K
Sbjct: 375 IISGCIQNGDIPLAVVLFSRMREDRVMPNEFTYSAMLKASLSILP----PQIHAQVIKTN 430
Query: 61 FQQDAFVQTGLIDMYSK---CSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEA 117
+Q FV T L+ YSK D +S K++++ + VV+W++++S H++A + A
Sbjct: 431 YQHIPFVGTALLASYSKFGSTEDALSIFKMIEQ-----KDVVAWSAMLSCHAQAGDCEGA 485
Query: 118 ILVLKEMWVLGLELSASTFVSVVSGCS-----FRQGISMHCCVYKLGLLNNEIPLANSVM 172
+ +M + G++ + T SV+ C+ QG H K ++ I ++++++
Sbjct: 486 TYLFNKMAIQGIKPNEFTISSVIDACACPSAGVDQGRQFHAISIKY-RYHDAICVSSALV 544
Query: 173 SMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLV 232
SMY++ G ++ A+ +F+ + +VSW ++I GY G +A QM + D V
Sbjct: 545 SMYSRKGNIDSAQIVFERQTDRDLVSWNSMISGYAQHGYSMKAIETFRQMEASGIQMDGV 604
Query: 233 VFLNLILGCAQVGNLFLALS-MHSLLLKSGYNNEDPLDNLLVSMYTKCGDL-ELARRVFD 290
FL +I+GC G + S++ N +V +Y++ G L E + D
Sbjct: 605 TFLAVIMGCTHNGLVVEGQQYFDSMVRDHKINPTMEHYACMVDLYSRAGKLDETMSLIRD 664
Query: 291 AVLEKSVFLWTSMIGG 306
+W +++G
Sbjct: 665 MPFPAGAMVWRTLLGA 680
>gi|147856413|emb|CAN82500.1| hypothetical protein VITISV_004914 [Vitis vinifera]
Length = 1408
Score = 347 bits (890), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 202/679 (29%), Positives = 345/679 (50%), Gaps = 67/679 (9%)
Query: 6 TNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDA 65
++ GS L + + GV +S + + LK C + IW G +H ++K GF D
Sbjct: 650 SSAGSLHIVLEVFKELHGKGVVFDSEVYSVALKTCTRVMDIWLGMEIHGCLIKRGFDLDV 709
Query: 66 FVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMW 125
+++ L++ Y +C + +V EMP + WN I + ++ + + + ++M
Sbjct: 710 YLRCALMNFYGRCWGLEKANQVFHEMPNP--EALLWNEAIILNLQSEKLQKGVELFRKMQ 767
Query: 126 VLGLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKV 181
L+ +T V V+ C + +H V++ GL ++++ L N ++SMY+K GK+
Sbjct: 768 FSFLKAETATIVRVLQACGKMGALNAAKQIHGYVFRFGL-DSDVSLCNPLISMYSKNGKL 826
Query: 182 NEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILG- 240
AR +FD + + SW ++I Y +G +N+A+ L ++ + PD+V + L+ G
Sbjct: 827 ELARRVFDSMENRNTSSWNSMISSYAALGFLNDAWSLFYELESSDMKPDIVTWNCLLSGH 886
Query: 241 ----------------------------------CAQVGNLFLALSMHSLLLKSGYNNED 266
+++G L + H +L++G++ +
Sbjct: 887 FLHGYKEEVLNILQRMQGEGFKPNSSSMTSVLQAISELGFLNMGKETHGYVLRNGFDCDV 946
Query: 267 PLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKT 326
+ L+ MY K L A+ VFD + +++F W S++ GY+ G +A+ L ++ K
Sbjct: 947 YVGTSLIDMYVKNHSLXSAQAVFDNMKNRNIFAWNSLVSGYSFKGMFEDALRLLNQMEKE 1006
Query: 327 SVRP------------------------NEATLATTLSACAELGSLSKGKEIEEYIVLNG 362
++P N A++ L ACA L L KGKEI + NG
Sbjct: 1007 GIKPDLVTWNGMISGYAMWGCARKAFMPNSASITCLLRACASLSLLQKGKEIHCLSIRNG 1066
Query: 363 LESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFY 422
+ V T+LI M+SK + A +VF R+ +K LA W+ MI G+AI G+G +A+++F
Sbjct: 1067 FIEDVFVATALIDMYSKSSSLKNAHKVFRRIQNKTLASWNCMIMGFAIFGLGKEAISVFN 1126
Query: 423 KMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGR 482
+MQ V G+ PDA+ +T++LSAC +SG++ +G +F SM +++ I P +EHY C+VDLLGR
Sbjct: 1127 EMQKV-GVGPDAITFTALLSACKNSGLIGEGWKYFDSMITDYRIVPRLEHYCCMVDLLGR 1185
Query: 483 AGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILM 542
AG D A IH MP++ A +W LL +C H N+ E AAKNL L P ++ NYILM
Sbjct: 1186 AGYLDEAWDLIHTMPLKPDATIWGALLGSCRIHKNLXFAETAAKNLFKLEPNNSANYILM 1245
Query: 543 ANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTL 602
NL++ W++ R LM + WS ++I+ V VF + ++ H + I L
Sbjct: 1246 MNLYSIFNRWEDMDHLRELMGAAGVRNRQVWSWIQINQRVHVFSSDEKPHPDAGKIYFEL 1305
Query: 603 KELHIKLLEAGYIAEADIV 621
+L ++ + GY+ + + V
Sbjct: 1306 YQLVSEMKKLGYVPDVNCV 1324
Score = 125 bits (313), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 81/326 (24%), Positives = 165/326 (50%), Gaps = 3/326 (0%)
Query: 168 ANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGY-VNVGNVNEAFGLCNQMRRMS 226
A +++S Y FG A +F + + W + + + + G+++ + ++
Sbjct: 610 AKNLISSYLGFGDFWSAAMVFYVGLPRNYLKWNSFVEEFKSSAGSLHIVLEVFKELHGKG 669
Query: 227 VTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELAR 286
V D V+ + C +V +++L + +H L+K G++ + L L++ Y +C LE A
Sbjct: 670 VVFDSEVYSVALKTCTRVMDIWLGMEIHGCLIKRGFDLDVYLRCALMNFYGRCWGLEKAN 729
Query: 287 RVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELG 346
+VF + LW I Q + V LF+++ + ++ AT+ L AC ++G
Sbjct: 730 QVFHEMPNPEALLWNEAIILNLQSEKLQKGVELFRKMQFSFLKAETATIVRVLQACGKMG 789
Query: 347 SLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMIN 406
+L+ K+I Y+ GL+S+ + LI M+SK G++ A+ VF+ + +++ + W++MI+
Sbjct: 790 ALNAAKQIHGYVFRFGLDSDVSLCNPLISMYSKNGKLELARRVFDSMENRNTSSWNSMIS 849
Query: 407 GYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGI 466
YA G + A +LFY+++ + +KPD V + +LS G ++ L+ + MQ G
Sbjct: 850 SYAALGFLNDAWSLFYELESSD-MKPDIVTWNCLLSGHFLHGYKEEVLNILQRMQGE-GF 907
Query: 467 EPSIEHYLCLVDLLGRAGRFDLALKT 492
+P+ ++ + G ++ +T
Sbjct: 908 KPNSSSMTSVLQAISELGFLNMGKET 933
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 51/234 (21%), Positives = 97/234 (41%), Gaps = 3/234 (1%)
Query: 264 NEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGY-AQLGYPSEAVNLFKR 322
N D L+S Y GD A VF L ++ W S + + + G + +FK
Sbjct: 605 NPDAAAKNLISSYLGFGDFWSAAMVFYVGLPRNYLKWNSFVEEFKSSAGSLHIVLEVFKE 664
Query: 323 LLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGR 382
L V + + L C + + G EI ++ G + + ++ +L++ + +C
Sbjct: 665 LHGKGVVFDSEVYSVALKTCTRVMDIWLGMEIHGCLIKRGFDLDVYLRCALMNFYGRCWG 724
Query: 383 INKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILS 442
+ KA +VF +P+ + +W+ I + + LF KMQ LK + +L
Sbjct: 725 LEKANQVFHEMPNPEALLWNEAIILNLQSEKLQKGVELFRKMQ-FSFLKAETATIVRVLQ 783
Query: 443 ACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEM 496
AC G ++ + FG++ + L+ + + G+ +LA + M
Sbjct: 784 ACGKMGALNAAKQIHGYV-FRFGLDSDVSLCNPLISMYSKNGKLELARRVFDSM 836
>gi|10092182|gb|AAG12601.1|AC068900_7 hypothetical protein; 7123-4412 [Arabidopsis thaliana]
Length = 861
Score = 347 bits (890), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 192/616 (31%), Positives = 325/616 (52%), Gaps = 28/616 (4%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+I N L + M + + + VL++CA ++ + G ++H+H LK
Sbjct: 210 IIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHALKSD 269
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F D V+T +DMY+KC + ++ + D R S+N++I+ +S+ +A+L+
Sbjct: 270 FAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQ--SYNAMITGYSQEEHGFKALLL 327
Query: 121 LKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGL---LNNEIPLANSVMSMYAK 177
+ GL + V C+ +G+S +Y L + L+ ++ +AN+ + MY K
Sbjct: 328 FHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGK 387
Query: 178 FGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNL 237
+ EA +FDE+ VSW II + G E L M R + PD F ++
Sbjct: 388 CQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSI 447
Query: 238 ILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS- 296
+ C G+L + +HS ++KSG + + L+ MY+KCG +E A ++ +++
Sbjct: 448 LKACTG-GSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRAN 506
Query: 297 -------------------VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLAT 337
W S+I GY +A LF R+++ + P++ T AT
Sbjct: 507 VSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYAT 566
Query: 338 TLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKD 397
L CA L S GK+I ++ L+S+ + ++L+ M+SKCG ++ ++ +FE+ +D
Sbjct: 567 VLDTCANLASAGLGKQIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDSRLMFEKSLRRD 626
Query: 398 LAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFF 457
W+AMI GYA HG G++A+ LF +M +E +KP+ V + SIL AC+H G++D GL +F
Sbjct: 627 FVTWNAMICGYAHHGKGEEAIQLFERMI-LENIKPNHVTFISILRACAHMGLIDKGLEYF 685
Query: 458 KSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKH-H 516
M+ ++G++P + HY +VD+LG++G+ AL+ I EMP E +W LL C H +
Sbjct: 686 YMMKRDYGLDPQLPHYSNMVDILGKSGKVKRALELIREMPFEADDVIWRTLLGVCTIHRN 745
Query: 517 NVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQV 576
NVE+ E A LL L+P + Y L++N++ AGMW++ + R M +L KEPG S V
Sbjct: 746 NVEVAEEATAALLRLDPQDSSAYTLLSNVYADAGMWEKVSDLRRNMRGFKLKKEPGCSWV 805
Query: 577 EIDGSVQVFVAGDRSH 592
E+ + VF+ GD++H
Sbjct: 806 ELKDELHVFLVGDKAH 821
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 142/515 (27%), Positives = 242/515 (46%), Gaps = 44/515 (8%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
M+ NG +++ + M + G+ + TF ++LK C+ + G ++H V++VG
Sbjct: 109 MLSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVG 168
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
D + L+DMY+K FV S +V +P ++ VSW++II+ + L A+
Sbjct: 169 CDTDVVAASALLDMYAKGKRFVESLRVFQGIPE--KNSVSWSAIIAGCVQNNLLSLALKF 226
Query: 121 LKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
KEM + +S S + SV+ C+ R G +H K + I + + + MYA
Sbjct: 227 FKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHALKSDFAADGI-VRTATLDMYA 285
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K + +A+ +FD + S+ +I GY + +A L +++ + D +
Sbjct: 286 KCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSG 345
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
+ CA V L L ++ L +KS + + + N + MY KC L A RVFD + +
Sbjct: 346 VFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRD 405
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEE 356
W ++I + Q G E + LF +L++ + P+E T + L AC GSL G EI
Sbjct: 406 AVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKACTG-GSLGYGMEIHS 464
Query: 357 YIVLNGLESNRQVQTSLIHMFSKCGRINKAKEV----------------FERVPDKDL-- 398
IV +G+ SN V SLI M+SKCG I +A+++ E++ +K L
Sbjct: 465 SIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQE 524
Query: 399 --AVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSF 456
W+++I+GY + + A LF +M + G+ PD Y ++L C++ G
Sbjct: 525 MCVSWNSIISGYVMKEQSEDAQMLFTRMMEM-GITPDKFTYATVLDTCANLASAGLGKQI 583
Query: 457 F-----KSMQSNFGIEPSIEHYLC--LVDLLGRAG 484
K +QS+ Y+C LVD+ + G
Sbjct: 584 HAQVIKKELQSDV--------YICSTLVDMYSKCG 610
Score = 185 bits (470), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 136/498 (27%), Positives = 243/498 (48%), Gaps = 58/498 (11%)
Query: 40 CANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVR----- 94
CA ++ GK+ H+H++ GF+ FV L+ +Y+ DFVS+ V D+MP+R
Sbjct: 16 CAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMPLRDVVSW 75
Query: 95 ------------------------LRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLE 130
+R VVSWNS++S + + + ++I V +M G+E
Sbjct: 76 NKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIE 135
Query: 131 LSASTFVSVVSGCSFRQ----GISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARS 186
TF ++ CSF + G+ +H V ++G + ++ A++++ MYAK + E+
Sbjct: 136 FDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGC-DTDVVAASALLDMYAKGKRFVESLR 194
Query: 187 IFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGN 246
+F I E + VSW+ II G V ++ A +M++++ ++ +++ CA +
Sbjct: 195 VFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSE 254
Query: 247 LFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGG 306
L L +H+ LKS + + + + MY KC +++ A+ +FD + + +MI G
Sbjct: 255 LRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITG 314
Query: 307 YAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESN 366
Y+Q + +A+ LF RL+ + + +E +L+ ACA + LS+G +I + + L +
Sbjct: 315 YSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLD 374
Query: 367 RQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQH 426
V + I M+ KC + +A VF+ + +D W+A+I + +G G + L LF M
Sbjct: 375 VCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLR 434
Query: 427 VEGLKPDAVVYTSILSACS----------HSGMVDDGLSFFKSMQSNFGIEPSIEHYLCL 476
++PD + SIL AC+ HS +V G M SN + S L
Sbjct: 435 SR-IEPDEFTFGSILKACTGGSLGYGMEIHSSIVKSG------MASNSSVGCS------L 481
Query: 477 VDLLGRAGRFDLALKTIH 494
+D+ + G + A K IH
Sbjct: 482 IDMYSKCGMIEEAEK-IH 498
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 80/347 (23%), Positives = 169/347 (48%), Gaps = 11/347 (3%)
Query: 169 NSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVT 228
N +++ Y+K + +A S F+ + +VSW +++ GY+ G ++ + M R +
Sbjct: 76 NKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIE 135
Query: 229 PDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRV 288
D F ++ C+ + + L + +H ++++ G + + + L+ MY K + RV
Sbjct: 136 FDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRV 195
Query: 289 FDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSL 348
F + EK+ W+++I G Q S A+ FK + K + +++ A+ L +CA L L
Sbjct: 196 FQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSEL 255
Query: 349 SKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGY 408
G ++ + + + ++ V+T+ + M++KC + A+ +F+ + + ++AMI GY
Sbjct: 256 RLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGY 315
Query: 409 AIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEP 468
+ G +AL LF+++ GL D + + + AC+ + +GL + I+
Sbjct: 316 SQEEHGFKALLLFHRLMS-SGLGFDEISLSGVFRACALVKGLSEGLQIY-----GLAIKS 369
Query: 469 SIEHYLCL----VDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSA 511
S+ +C+ +D+ G+ A + EM A W +++A
Sbjct: 370 SLSLDVCVANAAIDMYGKCQALAEAFRVFDEMR-RRDAVSWNAIIAA 415
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/224 (20%), Positives = 93/224 (41%), Gaps = 34/224 (15%)
Query: 342 CAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVW 401
CA+ G+L GK+ +++++G V L+ +++ A VF+++P +D+ W
Sbjct: 16 CAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMPLRDVVSW 75
Query: 402 SAMINGYAIHGMGDQALNLFYKMQHV-------------------------------EGL 430
+ MINGY+ +A N F+ M V EG+
Sbjct: 76 NKMINGYSKSNDMFKA-NSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGI 134
Query: 431 KPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLAL 490
+ D + IL CS G+ + G + + L+D+ + RF +L
Sbjct: 135 EFDGRTFAIILKVCSFLEDTSLGMQ-IHGIVVRVGCDTDVVAASALLDMYAKGKRFVESL 193
Query: 491 KTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPG 534
+ +P E + W+ +++ C++++ + L K + +N G
Sbjct: 194 RVFQGIP-EKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAG 236
>gi|225433487|ref|XP_002264838.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06140,
mitochondrial [Vitis vinifera]
gi|298205230|emb|CBI17289.3| unnamed protein product [Vitis vinifera]
Length = 688
Score = 347 bits (890), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 195/563 (34%), Positives = 315/563 (55%), Gaps = 20/563 (3%)
Query: 65 AFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSR-ACLNDEAILVLKE 123
A++Q G + + SK + ++ ++ SWN+I+++HS+ C D + + K
Sbjct: 56 AYIQLGSLHVASKAFNHIT-----------FENLHSWNTILASHSKNKCFYD-VLQLFKR 103
Query: 124 MWVLGLELSASTFVSVVSGC---SFRQGISM-HCCVYKLGLLNNEIPLANSVMSMYAKFG 179
M G + + V V C S QG + H KL L + +A ++M++Y + G
Sbjct: 104 MLKEGKLVDSFNLVFAVKACFGLSLFQGAKLFHSLAIKLRLEGDPY-VAPALMNVYTELG 162
Query: 180 KVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLIL 239
+ EA +F+E+ + V W +I G++N F L ++MRR D V LI
Sbjct: 163 SLEEAHKVFEEVPLKNSVIWGVMIKGHLNFSEEFGVFELFSRMRRSGFELDPFVVEGLIQ 222
Query: 240 GCAQVGNLFLALSMHSLLLKSGYNNEDP-LDNLLVSMYTKCGDLELARRVFDAVLEKSVF 298
C V + H L +K + + + L LV MY KCG L+ A ++F+ + + V
Sbjct: 223 ACGNVYAGKEGKTFHGLCIKKNFIDSNFFLQTSLVDMYMKCGFLDFALKLFEEISYRDVV 282
Query: 299 LWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYI 358
+W+++I G+A+ G E++++F+++L SV PN T A+ + AC+ LGSL +G+ + Y+
Sbjct: 283 VWSAIIAGFARNGRALESISMFRQMLADSVTPNSVTFASIVLACSSLGSLKQGRSVHGYM 342
Query: 359 VLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQAL 418
+ NG+E + + TS I M++KCG I A VF ++P+K++ WS MING+ +HG+ +AL
Sbjct: 343 IRNGVELDVKNYTSFIDMYAKCGCIVTAYRVFCQIPEKNVFSWSTMINGFGMHGLCAEAL 402
Query: 419 NLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVD 478
NLFY+M+ V L P++V + S+LSACSHSG +++G S FKSM ++GI P EHY C+VD
Sbjct: 403 NLFYEMRSVNQL-PNSVTFVSVLSACSHSGRIEEGWSHFKSMSRDYGITPVEEHYACMVD 461
Query: 479 LLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGN 538
LLGRAG+ D AL I+ MP E A W LL AC H EL E AK LL L +G
Sbjct: 462 LLGRAGKIDEALSFINNMPTEPGASAWGALLGACRIHRRAELAEEVAKKLLPLESDQSGV 521
Query: 539 YILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDI 598
Y++++N++ GMW+ R M ++ + K G++ +EI+ + +F + DR + + I
Sbjct: 522 YVMLSNIYADVGMWEMVKKTRLKMCEKGIHKIVGFTSIEIEEKLYLFSSEDRFAYKNTQI 581
Query: 599 RKTLKELHIKLLEAGYIAEADIV 621
L ++ E GY+ + V
Sbjct: 582 ESLWNSLKERMRELGYVPDLRFV 604
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 112/434 (25%), Positives = 206/434 (47%), Gaps = 8/434 (1%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
++ + + N F + L + ML+ G +SF +KAC ++ K HS +K+
Sbjct: 84 ILASHSKNKCFYDVLQLFKRMLKEGKLVDSFNLVFAVKACFGLSLFQGAKLFHSLAIKLR 143
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+ D +V L+++Y++ + KV +E+P L++ V W +I H +
Sbjct: 144 LEGDPYVAPALMNVYTELGSLEEAHKVFEEVP--LKNSVIWGVMIKGHLNFSEEFGVFEL 201
Query: 121 LKEMWVLGLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
M G EL ++ C + ++G + H K +++ L S++ MY
Sbjct: 202 FSRMRRSGFELDPFVVEGLIQACGNVYAGKEGKTFHGLCIKKNFIDSNFFLQTSLVDMYM 261
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K G ++ A +F+EI +V W+ II G+ G E+ + QM SVTP+ V F +
Sbjct: 262 KCGFLDFALKLFEEISYRDVVVWSAIIAGFARNGRALESISMFRQMLADSVTPNSVTFAS 321
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
++L C+ +G+L S+H ++++G + + MY KCG + A RVF + EK+
Sbjct: 322 IVLACSSLGSLKQGRSVHGYMIRNGVELDVKNYTSFIDMYAKCGCIVTAYRVFCQIPEKN 381
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKG-KEIE 355
VF W++MI G+ G +EA+NLF + + PN T + LSAC+ G + +G +
Sbjct: 382 VFSWSTMINGFGMHGLCAEALNLFYEMRSVNQLPNSVTFVSVLSACSHSGRIEEGWSHFK 441
Query: 356 EYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVP-DKDLAVWSAMINGYAIHGMG 414
G+ + ++ + + G+I++A +P + + W A++ IH
Sbjct: 442 SMSRDYGITPVEEHYACMVDLLGRAGKIDEALSFINNMPTEPGASAWGALLGACRIHRRA 501
Query: 415 DQALNLFYKMQHVE 428
+ A + K+ +E
Sbjct: 502 ELAEEVAKKLLPLE 515
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 98/363 (26%), Positives = 178/363 (49%), Gaps = 18/363 (4%)
Query: 161 LNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCN 220
L+ + + Y + G ++ A F+ I ++ SW TI+ + + N+ F
Sbjct: 43 LHRSLLFGPMIFGAYIQLGSLHVASKAFNHITFENLHSWNTILASH----SKNKCFYDVL 98
Query: 221 QM-RRMSVTPDLVVFLNLILGCAQVGNLFL---ALSMHSLLLKSGYNNEDPLDNLLVSMY 276
Q+ +RM LV NL+ L L A HSL +K + + L+++Y
Sbjct: 99 QLFKRMLKEGKLVDSFNLVFAVKACFGLSLFQGAKLFHSLAIKLRLEGDPYVAPALMNVY 158
Query: 277 TKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLA 336
T+ G LE A +VF+ V K+ +W MI G+ LF R+ ++ + +
Sbjct: 159 TELGSLEEAHKVFEEVPLKNSVIWGVMIKGHLNFSEEFGVFELFSRMRRSGFELDPFVVE 218
Query: 337 TTLSACAELGSLSKGKEIEEY----IVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFER 392
+ AC G++ GKE + + I N ++SN +QTSL+ M+ KCG ++ A ++FE
Sbjct: 219 GLIQAC---GNVYAGKEGKTFHGLCIKKNFIDSNFFLQTSLVDMYMKCGFLDFALKLFEE 275
Query: 393 VPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDD 452
+ +D+ VWSA+I G+A +G +++++F +M + + P++V + SI+ ACS G +
Sbjct: 276 ISYRDVVVWSAIIAGFARNGRALESISMFRQML-ADSVTPNSVTFASIVLACSSLGSLKQ 334
Query: 453 GLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSAC 512
G S M N G+E +++Y +D+ + G A + ++P E W+ +++
Sbjct: 335 GRSVHGYMIRN-GVELDVKNYTSFIDMYAKCGCIVTAYRVFCQIP-EKNVFSWSTMINGF 392
Query: 513 MKH 515
H
Sbjct: 393 GMH 395
>gi|255585273|ref|XP_002533336.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223526827|gb|EEF29045.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 708
Score = 347 bits (890), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 197/622 (31%), Positives = 331/622 (53%), Gaps = 18/622 (2%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI N+GS Y SM G+ +++TF +LK A + G++VHS ++K+G
Sbjct: 73 MISGYVNSGSLGSAWELYKSMKSFGLMPDAYTFGSILKGVACACRLDVGQQVHSLIVKMG 132
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+++ + + L+DMY+KC + V +P R+ VSWN++I+ +D A +
Sbjct: 133 YEEHVYAGSALLDMYAKCERVRDAFMVFKCIP--RRNSVSWNALIAGFVLEGDHDTAFWL 190
Query: 121 LKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGL-LNNEIPLANSVMSMY 175
L+ M G+ L TF +++ ++ + +HC + K G+ +N + N+ ++ Y
Sbjct: 191 LRCMEEEGVRLDDGTFSPLLTLLDEKKFYKLTMQLHCKIIKHGVQFDNTV--CNATITSY 248
Query: 176 AKFGKVNEARSIFD-EIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVF 234
++ G + +A +FD +G +V+W +++ ++ AF L M++ PD+ +
Sbjct: 249 SQCGSLEDAERVFDGAVGSRDLVTWNSMLAAFLAHDRKETAFKLFLDMQQFGFEPDIYTY 308
Query: 235 LNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMY--TKCGDLELARRVFDAV 292
+I C+ N S+H L++K G P+ N +++MY + +E A VF ++
Sbjct: 309 TTIISACSHKDN---GKSLHGLVIKRGLEQLVPICNAVIAMYLESSSNSMEDALNVFHSM 365
Query: 293 LEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGK 352
K W S++ G++Q G+ A+ LF + V + + L +C++L +L G+
Sbjct: 366 ESKDRVSWNSILTGFSQTGHSENALKLFVHMRFAVVDIDHYAFSAVLRSCSDLATLQLGQ 425
Query: 353 EIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHG 412
+I V +G ESN V +SLI M+SKCG I A++ FE+ W++++ YA HG
Sbjct: 426 QIHVLTVKSGFESNDFVASSLIFMYSKCGMIEDARKSFEKTAKDSSITWNSIMFAYAQHG 485
Query: 413 MGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEH 472
GD AL LF++M+ + +K D + + + L+ACSH G+V+ G KSM S++GI P +EH
Sbjct: 486 QGDVALGLFFQMRD-KKVKMDHITFVAALTACSHIGLVEQGRYLLKSMASDYGISPRMEH 544
Query: 473 YLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLN 532
Y C VDL GRAG D A I MP + A VW LL AC ++EL A +LL L
Sbjct: 545 YACAVDLFGRAGYLDEAKALIESMPFDPDAMVWKTLLGACRACGDIELAAQVASHLLELE 604
Query: 533 PGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSH 592
P Y++++N++ W E A LM +R++ K PGWS +E+ V F+A DR H
Sbjct: 605 PEEHCTYVILSNMYGHLKRWDEKACMARLMRERKVKKVPGWSWIEVKNEVHAFIADDRCH 664
Query: 593 HLSVDIRKTLKEL--HIKLLEA 612
+I + L++L IK L++
Sbjct: 665 SHFEEIYQILEQLMEDIKWLDS 686
Score = 151 bits (382), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 137/553 (24%), Positives = 236/553 (42%), Gaps = 61/553 (11%)
Query: 52 VHSHVLKVGFQQDAFVQTGLIDMYSKCSD--FVSSRKVLDEMPVRLRSVVSWNSIISAHS 109
H +K+G D + ++ Y++CS + + DEM R V+WN++IS +
Sbjct: 21 THCQTIKLGRSADIYATNNILSRYTRCSSGGLTFACNLFDEMS--HRDTVTWNTMISGYV 78
Query: 110 RACLNDEAILVLKEMWVLGLELSASTFVSVVSG----CSFRQGISMHCCVYKLGLLNNEI 165
+ A + K M GL A TF S++ G C G +H + K+G +
Sbjct: 79 NSGSLGSAWELYKSMKSFGLMPDAYTFGSILKGVACACRLDVGQQVHSLIVKMG-YEEHV 137
Query: 166 PLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRM 225
++++ MYAK +V +A +F I + VSW +I G+V G+ + AF L M
Sbjct: 138 YAGSALLDMYAKCERVRDAFMVFKCIPRRNSVSWNALIAGFVLEGDHDTAFWLLRCMEEE 197
Query: 226 SVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELA 285
V D F L+ + L + +H ++K G ++ + N ++ Y++CG LE A
Sbjct: 198 GVRLDDGTFSPLLTLLDEKKFYKLTMQLHCKIIKHGVQFDNTVCNATITSYSQCGSLEDA 257
Query: 286 RRVFD-AVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAE 344
RVFD AV + + W SM+ + A LF + + P+ T T +SAC+
Sbjct: 258 ERVFDGAVGSRDLVTWNSMLAAFLAHDRKETAFKLFLDMQQFGFEPDIYTYTTIISACSH 317
Query: 345 LGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMF--SKCGRINKAKEVFERVPDKDLAVWS 402
GK + ++ GLE + ++I M+ S + A VF + KD W+
Sbjct: 318 ---KDNGKSLHGLVIKRGLEQLVPICNAVIAMYLESSSNSMEDALNVFHSMESKDRVSWN 374
Query: 403 AMINGYAIHGMGDQALNLFYKMQ------------------------------HV----E 428
+++ G++ G + AL LF M+ HV
Sbjct: 375 SILTGFSQTGHSENALKLFVHMRFAVVDIDHYAFSAVLRSCSDLATLQLGQQIHVLTVKS 434
Query: 429 GLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDL 488
G + + V +S++ S GM++D F+ + I + ++ + G+ D+
Sbjct: 435 GFESNDFVASSLIFMYSKCGMIEDARKSFEKTAKDSSIT-----WNSIMFAYAQHGQGDV 489
Query: 489 ALKTIHEM---PVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLT---LNPGSTGNYILM 542
AL +M V++ + L+AC VE G Y K++ + ++P +Y
Sbjct: 490 ALGLFFQMRDKKVKMDHITFVAALTACSHIGLVEQGRYLLKSMASDYGISP-RMEHYACA 548
Query: 543 ANLFTSAGMWKEA 555
+LF AG EA
Sbjct: 549 VDLFGRAGYLDEA 561
>gi|357128220|ref|XP_003565772.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Brachypodium distachyon]
Length = 1206
Score = 347 bits (890), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 198/625 (31%), Positives = 333/625 (53%), Gaps = 8/625 (1%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+++ G FEE + + + G N F VLK ++++ VH+ K+G
Sbjct: 502 LVQGHALRGEFEEASALFQRLRWEGHEVNQFVLTTVLKLVVAMDTLGLAWGVHACACKLG 561
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
++AFV + LID YS C +R+V D + + V+W +++S +S + + +
Sbjct: 562 HDRNAFVGSALIDAYSMCGVVSDARRVFDG--IVGKDAVAWTAMVSCYSENDCPENTLQI 619
Query: 121 LKEMWVLGLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
+M V +L+ SV+ S G +H C K L + E + +++ MYA
Sbjct: 620 FSKMRVAVSKLNPFALTSVLRAAVCLSSVVLGKGIHACSVKT-LYDTERHVYGALLDMYA 678
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K G + +AR F+ + ++ W+ +I Y +AF L +M R SV+P+ +
Sbjct: 679 KCGNIEDARLAFEMVTNDDVILWSLMISRYAQCNQNEQAFELFIRMMRSSVSPNEFSLSS 738
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
++ CA + L L +H+ +K G+ +E + N L+ +Y KC D+E + +F ++ + +
Sbjct: 739 VLQACANMPLLDLGKQIHNHAIKIGHESELFVGNALIDLYAKCSDMESSLEIFSSLRDVN 798
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEE 356
W ++I GY++ G+ A+++F+ + SV + T ++ L ACA S++ ++
Sbjct: 799 EVSWNTIIVGYSKSGFGEAALSVFREMRAASVPSTQVTYSSVLRACASTASINHVGQVHC 858
Query: 357 YIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQ 416
I + S+ V SLI ++KCG I A+E+FE + + DL W+A+I+GYA+HG
Sbjct: 859 LIEKSTFNSDTIVSNSLIDSYAKCGCIRDAREIFETLKECDLVSWNAIISGYAVHGQAAM 918
Query: 417 ALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCL 476
A LF M +K + + + ++LS C +G+V GLS F SM+ + GIEPS+EHY C+
Sbjct: 919 AQELF-DMMSKNSIKANDITFVALLSVCGSTGLVSQGLSLFDSMRLDHGIEPSMEHYTCI 977
Query: 477 VDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGST 536
V LLGRAGR + AL I ++P A VW LLS+C+ H NVELG ++A+ +L + P
Sbjct: 978 VRLLGRAGRLNDALNFIGDIPSAPSAMVWRALLSSCIVHKNVELGRFSAEKVLEIEPQDE 1037
Query: 537 GNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSV 596
Y+L++N++++AG + A R M + + KEPG S VEI G V F G H
Sbjct: 1038 TTYVLLSNMYSAAGSLDQVAFFRKSMRNIGVRKEPGLSWVEIKGEVHAFSVGSEDHPCMR 1097
Query: 597 DIRKTLKELHIKLLEAGYIAEADIV 621
I L+ L++K + GY+ + D V
Sbjct: 1098 VINAMLEWLNLKAIREGYVPDTDEV 1122
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 119/429 (27%), Positives = 220/429 (51%), Gaps = 10/429 (2%)
Query: 29 NSFTFPLVLKACANINSIWDGKRVHSHVLKVG--FQQDAFVQTGLIDMYSKCSDFVSSRK 86
+S+ + +L+ C G+ VH HV++ G + D F L++MY+K F S+ +
Sbjct: 427 DSYAYARLLQGCVARGDARGGRAVHGHVVRSGGLARLDLFCANVLLNMYTKVGPFGSAHR 486
Query: 87 VLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVS----VVSG 142
V D +P R++VS+ +++ H+ +EA + + + G E++ + VV+
Sbjct: 487 VFDGLPE--RNMVSFVTLVQGHALRGEFEEASALFQRLRWEGHEVNQFVLTTVLKLVVAM 544
Query: 143 CSFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTI 202
+ +H C KLG N + ++++ Y+ G V++AR +FD I V+WT +
Sbjct: 545 DTLGLAWGVHACACKLGHDRNAF-VGSALIDAYSMCGVVSDARRVFDGIVGKDAVAWTAM 603
Query: 203 IGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGY 262
+ Y + ++MR + +++ + ++ L +H+ +K+ Y
Sbjct: 604 VSCYSENDCPENTLQIFSKMRVAVSKLNPFALTSVLRAAVCLSSVVLGKGIHACSVKTLY 663
Query: 263 NNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKR 322
+ E + L+ MY KCG++E AR F+ V V LW+ MI YAQ +A LF R
Sbjct: 664 DTERHVYGALLDMYAKCGNIEDARLAFEMVTNDDVILWSLMISRYAQCNQNEQAFELFIR 723
Query: 323 LLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGR 382
++++SV PNE +L++ L ACA + L GK+I + + G ES V +LI +++KC
Sbjct: 724 MMRSSVSPNEFSLSSVLQACANMPLLDLGKQIHNHAIKIGHESELFVGNALIDLYAKCSD 783
Query: 383 INKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILS 442
+ + E+F + D + W+ +I GY+ G G+ AL++F +M+ + V Y+S+L
Sbjct: 784 MESSLEIFSSLRDVNEVSWNTIIVGYSKSGFGEAALSVFREMR-AASVPSTQVTYSSVLR 842
Query: 443 ACSHSGMVD 451
AC+ + ++
Sbjct: 843 ACASTASIN 851
Score = 145 bits (365), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 92/323 (28%), Positives = 160/323 (49%), Gaps = 6/323 (1%)
Query: 136 FVSVVSGC----SFRQGISMHCCVYKLG-LLNNEIPLANSVMSMYAKFGKVNEARSIFDE 190
+ ++ GC R G ++H V + G L ++ AN +++MY K G A +FD
Sbjct: 431 YARLLQGCVARGDARGGRAVHGHVVRSGGLARLDLFCANVLLNMYTKVGPFGSAHRVFDG 490
Query: 191 IGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLA 250
+ E ++VS+ T++ G+ G EA L ++R + V ++ + L LA
Sbjct: 491 LPERNMVSFVTLVQGHALRGEFEEASALFQRLRWEGHEVNQFVLTTVLKLVVAMDTLGLA 550
Query: 251 LSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQL 310
+H+ K G++ + + L+ Y+ CG + ARRVFD ++ K WT+M+ Y++
Sbjct: 551 WGVHACACKLGHDRNAFVGSALIDAYSMCGVVSDARRVFDGIVGKDAVAWTAMVSCYSEN 610
Query: 311 GYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQ 370
P + +F ++ + N L + L A L S+ GK I V ++ R V
Sbjct: 611 DCPENTLQIFSKMRVAVSKLNPFALTSVLRAAVCLSSVVLGKGIHACSVKTLYDTERHVY 670
Query: 371 TSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGL 430
+L+ M++KCG I A+ FE V + D+ +WS MI+ YA +QA LF +M +
Sbjct: 671 GALLDMYAKCGNIEDARLAFEMVTNDDVILWSLMISRYAQCNQNEQAFELFIRMMR-SSV 729
Query: 431 KPDAVVYTSILSACSHSGMVDDG 453
P+ +S+L AC++ ++D G
Sbjct: 730 SPNEFSLSSVLQACANMPLLDLG 752
>gi|242066256|ref|XP_002454417.1| hypothetical protein SORBIDRAFT_04g030430 [Sorghum bicolor]
gi|241934248|gb|EES07393.1| hypothetical protein SORBIDRAFT_04g030430 [Sorghum bicolor]
Length = 703
Score = 347 bits (890), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 195/590 (33%), Positives = 326/590 (55%), Gaps = 16/590 (2%)
Query: 29 NSFTFPLVLKACANINSIWDGKRVHSHVLK-VGFQQDAFVQTGLIDMYSKCSDFV---SS 84
+ FTF L+L+ACA + S+ G+ VH+ ++ +DAFV T ++ MY++C D V ++
Sbjct: 96 DGFTFSLLLRACAALPSLAHGRAVHAVAIRSCTASEDAFVATAIVQMYARCGDMVGAINA 155
Query: 85 RKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAI-LVLKEMWVLGLELSASTFVSVVSGC 143
VL++ + LR+ S+++ + + + +EA+ + + G+ L+ T VS +S
Sbjct: 156 YGVLEKPDIVLRT-----SVVTGYEQNGMAEEALEFFARNVVGQGVMLTPVTLVSAMSAA 210
Query: 144 S----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSW 199
+ R+G + H V + L ++ L N+V+S Y K G + +F+ + + +++W
Sbjct: 211 AQLGHVRKGQACHAYVVR-NSLGYDLALVNTVLSFYVKIGDFQASMRLFEGMTDRDVITW 269
Query: 200 TTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLK 259
+ +I GYV G+ +E + +M + V P+ V ++++ CA V + +H + +
Sbjct: 270 SCMIKGYVQHGDAHEGLRMYREMVKARVQPNSVTLVSVLQACALVVDAEEGKRVHRVAVS 329
Query: 260 SGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNL 319
G E + LV MY KC E A +F + +K V W ++IGG Q P E++++
Sbjct: 330 IGCELEVGVATALVDMYMKCSCHEEAMCLFHRMPKKDVVAWAAVIGGLTQNELPGESLHV 389
Query: 320 FKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSK 379
FK +L P+ T+ L+AC+E G + Y+V NG +N V +L+ ++SK
Sbjct: 390 FKCMLLDDHVPDAITMVKVLAACSEFGGTRLAICLHGYLVRNGFNNNAFVAAALLDLYSK 449
Query: 380 CGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTS 439
CG I+ A VFE +KD+ VW +MI GY HG+G +A+ L+ +M ++P++V + S
Sbjct: 450 CGDIDSAVRVFEGTTEKDIVVWGSMIAGYGAHGLGQEAVALYQRMI-ASSIQPNSVTFVS 508
Query: 440 ILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVE 499
+LSACSHSG+V +G+ F SM FG+ P+ EH +VDLLGRAG A++ I M
Sbjct: 509 VLSACSHSGLVQEGIQIFDSMTQVFGVVPNAEHQSAMVDLLGRAGELQEAIRFIRGMDGR 568
Query: 500 VQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATAR 559
A W LL+AC +H+N ++ + AAK+LL L+P G Y L+ N++ W+ R
Sbjct: 569 AVAHTWCALLAACREHNNTKMSKVAAKSLLKLDPDHVGYYNLLTNIYAYDEKWESVKDTR 628
Query: 560 GLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKELHIKL 609
++ R L K PG+S VE+ V F+AG+R+H +I L +L KL
Sbjct: 629 DMVRGRDLRKVPGYSSVEVGNLVHTFIAGERTHQDWDNICTLLCDLSRKL 678
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 114/446 (25%), Positives = 219/446 (49%), Gaps = 19/446 (4%)
Query: 7 NNGSFEETLSTYS-SMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDA 65
NG EE L ++ +++ GV T + A A + + G+ H++V++ D
Sbjct: 176 QNGMAEEALEFFARNVVGQGVMLTPVTLVSAMSAAAQLGHVRKGQACHAYVVRNSLGYDL 235
Query: 66 FVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMW 125
+ ++ Y K DF +S ++ + M R V++W+ +I + + E + + +EM
Sbjct: 236 ALVNTVLSFYVKIGDFQASMRLFEGMTD--RDVITWSCMIKGYVQHGDAHEGLRMYREMV 293
Query: 126 VLGLELSASTFVSVVSGCSF----RQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKV 181
++ ++ T VSV+ C+ +G +H +G E+ +A +++ MY K
Sbjct: 294 KARVQPNSVTLVSVLQACALVVDAEEGKRVHRVAVSIG-CELEVGVATALVDMYMKCSCH 352
Query: 182 NEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGC 241
EA +F + + +V+W +IGG E+ + M PD + + ++ C
Sbjct: 353 EEAMCLFHRMPKKDVVAWAAVIGGLTQNELPGESLHVFKCMLLDDHVPDAITMVKVLAAC 412
Query: 242 AQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWT 301
++ G LA+ +H L+++G+NN + L+ +Y+KCGD++ A RVF+ EK + +W
Sbjct: 413 SEFGGTRLAICLHGYLVRNGFNNNAFVAAALLDLYSKCGDIDSAVRVFEGTTEKDIVVWG 472
Query: 302 SMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIV-L 360
SMI GY G EAV L++R++ +S++PN T + LSAC+ G + +G +I + + +
Sbjct: 473 SMIAGYGAHGLGQEAVALYQRMIASSIQPNSVTFVSVLSACSHSGLVQEGIQIFDSMTQV 532
Query: 361 NGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLA-VWSAMINGYAIHG---MGDQ 416
G+ N + Q++++ + + G + +A + + +A W A++ H M
Sbjct: 533 FGVVPNAEHQSAMVDLLGRAGELQEAIRFIRGMDGRAVAHTWCALLAACREHNNTKMSKV 592
Query: 417 ALNLFYKMQHVEGLKPDAVVYTSILS 442
A K L PD V Y ++L+
Sbjct: 593 AAKSLLK------LDPDHVGYYNLLT 612
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 92/361 (25%), Positives = 170/361 (47%), Gaps = 12/361 (3%)
Query: 151 MHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVG 210
+H + + GLL++ L V++ Y AR +FDE + ++ ++
Sbjct: 24 LHANLLRSGLLHSSHHLTAHVLAWYPP----GLARDLFDEFPSPTPRLANALLRAHIRAR 79
Query: 211 NVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDP-LD 269
A L ++R V D F L+ CA + +L ++H++ ++S +ED +
Sbjct: 80 QWRAAILLGPRLR---VRLDGFTFSLLLRACAALPSLAHGRAVHAVAIRSCTASEDAFVA 136
Query: 270 NLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKR-LLKTSV 328
+V MY +CGD+ A + + + + L TS++ GY Q G EA+ F R ++ V
Sbjct: 137 TAIVQMYARCGDMVGAINAYGVLEKPDIVLRTSVVTGYEQNGMAEEALEFFARNVVGQGV 196
Query: 329 RPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKE 388
TL + +SA A+LG + KG+ Y+V N L + + +++ + K G +
Sbjct: 197 MLTPVTLVSAMSAAAQLGHVRKGQACHAYVVRNSLGYDLALVNTVLSFYVKIGDFQASMR 256
Query: 389 VFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSG 448
+FE + D+D+ WS MI GY HG + L ++ +M ++P++V S+L AC+
Sbjct: 257 LFEGMTDRDVITWSCMIKGYVQHGDAHEGLRMYREMVKAR-VQPNSVTLVSVLQACALVV 315
Query: 449 MVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPL 508
++G + + + G E + LVD+ + + A+ H MP + WA +
Sbjct: 316 DAEEGKRVHR-VAVSIGCELEVGVATALVDMYMKCSCHEEAMCLFHRMP-KKDVVAWAAV 373
Query: 509 L 509
+
Sbjct: 374 I 374
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 78/249 (31%), Positives = 126/249 (50%), Gaps = 7/249 (2%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI+ +G E L Y M++ V NS T VL+ACA + +GKRVH + +G
Sbjct: 272 MIKGYVQHGDAHEGLRMYREMVKARVQPNSVTLVSVLQACALVVDAEEGKRVHRVAVSIG 331
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+ + V T L+DMY KCS + + MP + VV+W ++I ++ L E++ V
Sbjct: 332 CELEVGVATALVDMYMKCSCHEEAMCLFHRMPK--KDVVAWAAVIGGLTQNELPGESLHV 389
Query: 121 LKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
K M + A T V V++ CS R I +H + + G NN +A +++ +Y+
Sbjct: 390 FKCMLLDDHVPDAITMVKVLAACSEFGGTRLAICLHGYLVRNGFNNNAF-VAAALLDLYS 448
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K G ++ A +F+ E IV W ++I GY G EA L +M S+ P+ V F++
Sbjct: 449 KCGDIDSAVRVFEGTTEKDIVVWGSMIAGYGAHGLGQEAVALYQRMIASSIQPNSVTFVS 508
Query: 237 LILGCAQVG 245
++ C+ G
Sbjct: 509 VLSACSHSG 517
>gi|334185027|ref|NP_186882.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546764|sp|Q9FWA6.2|PP207_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g02330
gi|332640272|gb|AEE73793.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 903
Score = 347 bits (890), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 192/616 (31%), Positives = 325/616 (52%), Gaps = 28/616 (4%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+I N L + M + + + VL++CA ++ + G ++H+H LK
Sbjct: 252 IIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHALKSD 311
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F D V+T +DMY+KC + ++ + D R S+N++I+ +S+ +A+L+
Sbjct: 312 FAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQ--SYNAMITGYSQEEHGFKALLL 369
Query: 121 LKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGL---LNNEIPLANSVMSMYAK 177
+ GL + V C+ +G+S +Y L + L+ ++ +AN+ + MY K
Sbjct: 370 FHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGK 429
Query: 178 FGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNL 237
+ EA +FDE+ VSW II + G E L M R + PD F ++
Sbjct: 430 CQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSI 489
Query: 238 ILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS- 296
+ C G+L + +HS ++KSG + + L+ MY+KCG +E A ++ +++
Sbjct: 490 LKACTG-GSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRAN 548
Query: 297 -------------------VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLAT 337
W S+I GY +A LF R+++ + P++ T AT
Sbjct: 549 VSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYAT 608
Query: 338 TLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKD 397
L CA L S GK+I ++ L+S+ + ++L+ M+SKCG ++ ++ +FE+ +D
Sbjct: 609 VLDTCANLASAGLGKQIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDSRLMFEKSLRRD 668
Query: 398 LAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFF 457
W+AMI GYA HG G++A+ LF +M +E +KP+ V + SIL AC+H G++D GL +F
Sbjct: 669 FVTWNAMICGYAHHGKGEEAIQLFERMI-LENIKPNHVTFISILRACAHMGLIDKGLEYF 727
Query: 458 KSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKH-H 516
M+ ++G++P + HY +VD+LG++G+ AL+ I EMP E +W LL C H +
Sbjct: 728 YMMKRDYGLDPQLPHYSNMVDILGKSGKVKRALELIREMPFEADDVIWRTLLGVCTIHRN 787
Query: 517 NVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQV 576
NVE+ E A LL L+P + Y L++N++ AGMW++ + R M +L KEPG S V
Sbjct: 788 NVEVAEEATAALLRLDPQDSSAYTLLSNVYADAGMWEKVSDLRRNMRGFKLKKEPGCSWV 847
Query: 577 EIDGSVQVFVAGDRSH 592
E+ + VF+ GD++H
Sbjct: 848 ELKDELHVFLVGDKAH 863
Score = 191 bits (486), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 141/524 (26%), Positives = 253/524 (48%), Gaps = 58/524 (11%)
Query: 14 TLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLID 73
+ S ++ L ++ F V K CA ++ GK+ H+H++ GF+ FV L+
Sbjct: 32 SFSYFTDFLNQVNSVSTTNFSFVFKECAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQ 91
Query: 74 MYSKCSDFVSSRKVLDEMPVR-----------------------------LRSVVSWNSI 104
+Y+ DFVS+ V D+MP+R +R VVSWNS+
Sbjct: 92 VYTNSRDFVSASMVFDKMPLRDVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSM 151
Query: 105 ISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCSFRQ----GISMHCCVYKLGL 160
+S + + + ++I V +M G+E TF ++ CSF + G+ +H V ++G
Sbjct: 152 LSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGC 211
Query: 161 LNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCN 220
+ ++ A++++ MYAK + E+ +F I E + VSW+ II G V ++ A
Sbjct: 212 -DTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFK 270
Query: 221 QMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCG 280
+M++++ ++ +++ CA + L L +H+ LKS + + + + MY KC
Sbjct: 271 EMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCD 330
Query: 281 DLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLS 340
+++ A+ +FD + + +MI GY+Q + +A+ LF RL+ + + +E +L+
Sbjct: 331 NMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFR 390
Query: 341 ACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAV 400
ACA + LS+G +I + + L + V + I M+ KC + +A VF+ + +D
Sbjct: 391 ACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVS 450
Query: 401 WSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACS----------HSGMV 450
W+A+I + +G G + L LF M ++PD + SIL AC+ HS +V
Sbjct: 451 WNAIIAAHEQNGKGYETLFLFVSMLRSR-IEPDEFTFGSILKACTGGSLGYGMEIHSSIV 509
Query: 451 DDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIH 494
G M SN + S L+D+ + G + A K IH
Sbjct: 510 KSG------MASNSSVGCS------LIDMYSKCGMIEEAEK-IH 540
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 80/347 (23%), Positives = 169/347 (48%), Gaps = 11/347 (3%)
Query: 169 NSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVT 228
N +++ Y+K + +A S F+ + +VSW +++ GY+ G ++ + M R +
Sbjct: 118 NKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIE 177
Query: 229 PDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRV 288
D F ++ C+ + + L + +H ++++ G + + + L+ MY K + RV
Sbjct: 178 FDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRV 237
Query: 289 FDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSL 348
F + EK+ W+++I G Q S A+ FK + K + +++ A+ L +CA L L
Sbjct: 238 FQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSEL 297
Query: 349 SKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGY 408
G ++ + + + ++ V+T+ + M++KC + A+ +F+ + + ++AMI GY
Sbjct: 298 RLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGY 357
Query: 409 AIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEP 468
+ G +AL LF+++ GL D + + + AC+ + +GL + I+
Sbjct: 358 SQEEHGFKALLLFHRLMS-SGLGFDEISLSGVFRACALVKGLSEGLQIY-----GLAIKS 411
Query: 469 SIEHYLCL----VDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSA 511
S+ +C+ +D+ G+ A + EM A W +++A
Sbjct: 412 SLSLDVCVANAAIDMYGKCQALAEAFRVFDEMR-RRDAVSWNAIIAA 457
>gi|326494876|dbj|BAJ94557.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 783
Score = 347 bits (890), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 186/578 (32%), Positives = 325/578 (56%), Gaps = 8/578 (1%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+I + G L + M GV + F AC+ + + G+++H + +
Sbjct: 209 VITGYSQAGQAGVALELFGRMGLDGVRPDRFVLASAASACSGLGFVEGGRQIHGYAYRTA 268
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+ DA V LID+Y KCS + +R++ D M R++VSW ++I+ + + L+ EA+ +
Sbjct: 269 AESDASVVNALIDLYCKCSRLLLARRLFDSM--ENRNLVSWTTMIAGYMQNSLDTEAMSM 326
Query: 121 LKEMWVLGLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
++ G + S+++ C + QG +H V K L ++E + N+++ MYA
Sbjct: 327 FWQLSQAGWQPDVFACTSILNSCGSLAAIWQGRQVHAHVIKADLESDEY-VKNALIDMYA 385
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K + EAR++F+ + E +S+ +I GY +G++ A + +MR S+ P L+ F++
Sbjct: 386 KCEHLTEARAVFEALAEDDAISYNAMIEGYARLGDLTGAVEIFGKMRYCSLKPSLLTFVS 445
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
L+ + +L L+ +H L++KSG + + + L+ +Y+K ++ A+ VF + +
Sbjct: 446 LLGVSSSRSDLELSKQIHGLIVKSGTSLDLYAGSALIDVYSKFSLVDDAKLVFSLMQNRD 505
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEE 356
+ +W +MI G AQ EAV LF RL + + PNE T ++ + L S+ G++
Sbjct: 506 MVIWNAMIFGLAQNERGEEAVKLFARLRVSGLTPNEFTFVALVTVASTLASIFHGQQFHA 565
Query: 357 YIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQ 416
I+ G +S+ + +LI M++KCG I + + +FE KD+ W++MI+ YA HG ++
Sbjct: 566 QIIKAGADSDPHISNALIDMYAKCGFIEEGRLLFESTLGKDVICWNSMISTYAQHGHAEE 625
Query: 417 ALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCL 476
AL++F M+ G++P+ V + S+LSAC+H+G+VD+GL F SM++ + +EP EHY +
Sbjct: 626 ALHVFGMMEGA-GVEPNYVTFVSVLSACAHAGLVDEGLHHFNSMKTKYAVEPGTEHYASV 684
Query: 477 VDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGST 536
V+L GR+G+ A + I MP+E A +W LLSAC NVE+G YA + L +P +
Sbjct: 685 VNLFGRSGKLHAAKEFIERMPIEPVATIWRSLLSACHLFGNVEIGRYATEMALLADPADS 744
Query: 537 GNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWS 574
G +LM+N++ S G+W +A R MD + KEPG+S
Sbjct: 745 GPSVLMSNIYASKGLWADAQKLRQGMDCAGVVKEPGYS 782
Score = 202 bits (515), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 128/496 (25%), Positives = 248/496 (50%), Gaps = 12/496 (2%)
Query: 29 NSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVL 88
N F L+ACA + G++VH K+G + FV T L+++Y+K ++ V
Sbjct: 136 NEFLLASALRACAQSRAARFGEQVHGVAAKLGLDANVFVGTALVNLYAKAGRIDAAMSVF 195
Query: 89 DEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCS---- 144
D +P R+ V+W ++I+ +S+A A+ + M + G+ S S CS
Sbjct: 196 DALPA--RNPVTWTAVITGYSQAGQAGVALELFGRMGLDGVRPDRFVLASAASACSGLGF 253
Query: 145 FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIG 204
G +H Y+ ++ + N+++ +Y K ++ AR +FD + ++VSWTT+I
Sbjct: 254 VEGGRQIHGYAYRTA-AESDASVVNALIDLYCKCSRLLLARRLFDSMENRNLVSWTTMIA 312
Query: 205 GYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNN 264
GY+ EA + Q+ + PD+ +++ C + ++ +H+ ++K+ +
Sbjct: 313 GYMQNSLDTEAMSMFWQLSQAGWQPDVFACTSILNSCGSLAAIWQGRQVHAHVIKADLES 372
Query: 265 EDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLL 324
++ + N L+ MY KC L AR VF+A+ E + +MI GYA+LG + AV +F ++
Sbjct: 373 DEYVKNALIDMYAKCEHLTEARAVFEALAEDDAISYNAMIEGYARLGDLTGAVEIFGKMR 432
Query: 325 KTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRIN 384
S++P+ T + L + L K+I IV +G + ++LI ++SK ++
Sbjct: 433 YCSLKPSLLTFVSLLGVSSSRSDLELSKQIHGLIVKSGTSLDLYAGSALIDVYSKFSLVD 492
Query: 385 KAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSAC 444
AK VF + ++D+ +W+AMI G A + G++A+ LF +++ V GL P+ + ++++
Sbjct: 493 DAKLVFSLMQNRDMVIWNAMIFGLAQNERGEEAVKLFARLR-VSGLTPNEFTFVALVTVA 551
Query: 445 SHSGMVDDGLSFFKS-MQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQ 503
S + G F +++ +P I + L+D+ + G + + + E +
Sbjct: 552 STLASIFHGQQFHAQIIKAGADSDPHISN--ALIDMYAKCGFIEEG-RLLFESTLGKDVI 608
Query: 504 VWAPLLSACMKHHNVE 519
W ++S +H + E
Sbjct: 609 CWNSMISTYAQHGHAE 624
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 118/404 (29%), Positives = 210/404 (51%), Gaps = 14/404 (3%)
Query: 52 VHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRA 111
H+ + G D F+ L+ YSK +R++ D MP R ++VSW S IS +++
Sbjct: 52 AHARAVVSGLLPDLFLANLLLRGYSKLGRLGDARRLFDSMPSR--NLVSWGSAISMYAQH 109
Query: 112 CLNDEAILVLKEMWVLGLE----------LSASTFVSVVSGCSFRQGISMHCCVYKLGLL 161
D+A+L+ G L AS + + R G +H KLGL
Sbjct: 110 GREDDALLLFAAFPSAGAASPDGEPPNEFLLASALRACAQSRAARFGEQVHGVAAKLGLD 169
Query: 162 NNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQ 221
N + + +++++YAK G+++ A S+FD + + V+WT +I GY G A L +
Sbjct: 170 AN-VFVGTALVNLYAKAGRIDAAMSVFDALPARNPVTWTAVITGYSQAGQAGVALELFGR 228
Query: 222 MRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGD 281
M V PD V + C+ +G + +H ++ ++ + N L+ +Y KC
Sbjct: 229 MGLDGVRPDRFVLASAASACSGLGFVEGGRQIHGYAYRTAAESDASVVNALIDLYCKCSR 288
Query: 282 LELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSA 341
L LARR+FD++ +++ WT+MI GY Q +EA+++F +L + +P+ + L++
Sbjct: 289 LLLARRLFDSMENRNLVSWTTMIAGYMQNSLDTEAMSMFWQLSQAGWQPDVFACTSILNS 348
Query: 342 CAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVW 401
C L ++ +G+++ +++ LES+ V+ +LI M++KC + +A+ VFE + + D +
Sbjct: 349 CGSLAAIWQGRQVHAHVIKADLESDEYVKNALIDMYAKCEHLTEARAVFEALAEDDAISY 408
Query: 402 SAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACS 445
+AMI GYA G A+ +F KM++ LKP + + S+L S
Sbjct: 409 NAMIEGYARLGDLTGAVEIFGKMRYCS-LKPSLLTFVSLLGVSS 451
>gi|356498743|ref|XP_003518209.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Glycine max]
Length = 573
Score = 347 bits (889), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 171/459 (37%), Positives = 273/459 (59%), Gaps = 2/459 (0%)
Query: 163 NEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQM 222
++ +AN ++ YA+ +++A S+FD + +W+ ++GG+ G+ + ++
Sbjct: 33 QDLVIANKLLYTYAQHKAIDDAYSLFDGLTMRDSKTWSVMVGGFAKAGDHAGCYATFREL 92
Query: 223 RRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDL 282
R VTPD +I C +L + +H ++LK G ++ + LV MY KC +
Sbjct: 93 LRCGVTPDNYTLPFVIRTCRDRTDLQIGRVIHDVVLKHGLLSDHFVCASLVDMYAKCIVV 152
Query: 283 ELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSAC 342
E A+R+F+ +L K + WT MIG YA E++ LF R+ + V P++ + T ++AC
Sbjct: 153 EDAQRLFERMLSKDLVTWTVMIGAYADCN-AYESLVLFDRMREEGVVPDKVAMVTVVNAC 211
Query: 343 AELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWS 402
A+LG++ + + +YIV NG + + T++I M++KCG + A+EVF+R+ +K++ WS
Sbjct: 212 AKLGAMHRARFANDYIVRNGFSLDVILGTAMIDMYAKCGSVESAREVFDRMKEKNVISWS 271
Query: 403 AMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQS 462
AMI Y HG G A++LF+ M L P+ V + S+L ACSH+G++++GL FF SM
Sbjct: 272 AMIAAYGYHGRGKDAIDLFHMMLSCAIL-PNRVTFVSLLYACSHAGLIEEGLRFFNSMWE 330
Query: 463 NFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGE 522
+ P ++HY C+VDLLGRAGR D AL+ I M VE ++W+ LL AC H +EL E
Sbjct: 331 EHAVRPDVKHYTCMVDLLGRAGRLDEALRLIEAMTVEKDERLWSALLGACRIHSKMELAE 390
Query: 523 YAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSV 582
AA +LL L P + G+Y+L++N++ AG W++ A R +M R+L K PGW+ +E+D
Sbjct: 391 KAANSLLELQPQNPGHYVLLSNIYAKAGKWEKVAKFRDMMTQRKLKKIPGWTWIEVDNKT 450
Query: 583 QVFVAGDRSHHLSVDIRKTLKELHIKLLEAGYIAEADIV 621
F GDRSH S +I + L L KL AGY+ + D V
Sbjct: 451 YQFSVGDRSHPQSKEIYEMLMSLIKKLEMAGYVPDTDFV 489
Score = 165 bits (417), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 109/403 (27%), Positives = 203/403 (50%), Gaps = 24/403 (5%)
Query: 36 VLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRL 95
+L C N+ I ++VH+HV+ G QD + L+ Y++ + + D + +
Sbjct: 9 LLLRCRNVFHI---RQVHAHVVANGTLQDLVIANKLLYTYAQHKAIDDAYSLFDGLT--M 63
Query: 96 RSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCSFRQ----GISM 151
R +W+ ++ ++A + +E+ G+ T V+ C R G +
Sbjct: 64 RDSKTWSVMVGGFAKAGDHAGCYATFRELLRCGVTPDNYTLPFVIRTCRDRTDLQIGRVI 123
Query: 152 HCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGN 211
H V K GLL++ A S++ MYAK V +A+ +F+ + +V+WT +IG Y + N
Sbjct: 124 HDVVLKHGLLSDHFVCA-SLVDMYAKCIVVEDAQRLFERMLSKDLVTWTVMIGAYADC-N 181
Query: 212 VNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNL 271
E+ L ++MR V PD V + ++ CA++G + A + ++++G++ + L
Sbjct: 182 AYESLVLFDRMREEGVVPDKVAMVTVVNACAKLGAMHRARFANDYIVRNGFSLDVILGTA 241
Query: 272 LVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPN 331
++ MY KCG +E AR VFD + EK+V W++MI Y G +A++LF +L ++ PN
Sbjct: 242 MIDMYAKCGSVESAREVFDRMKEKNVISWSAMIAAYGYHGRGKDAIDLFHMMLSCAILPN 301
Query: 332 EATLATTLSACAELGSLSKGKEI-----EEYIVLNGLESNRQVQTSLIHMFSKCGRINKA 386
T + L AC+ G + +G EE+ V + + T ++ + + GR+++A
Sbjct: 302 RVTFVSLLYACSHAGLIEEGLRFFNSMWEEHAV----RPDVKHYTCMVDLLGRAGRLDEA 357
Query: 387 KEVFERVP-DKDLAVWSAMINGYAIHG---MGDQALNLFYKMQ 425
+ E + +KD +WSA++ IH + ++A N ++Q
Sbjct: 358 LRLIEAMTVEKDERLWSALLGACRIHSKMELAEKAANSLLELQ 400
Score = 122 bits (305), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 80/313 (25%), Positives = 157/313 (50%), Gaps = 12/313 (3%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
M+ G +T+ +L+ GV +++T P V++ C + + G+ +H VLK G
Sbjct: 72 MVGGFAKAGDHAGCYATFRELLRCGVTPDNYTLPFVIRTCRDRTDLQIGRVIHDVVLKHG 131
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
D FV L+DMY+KC ++++ + M + +V+W +I A++ C E++++
Sbjct: 132 LLSDHFVCASLVDMYAKCIVVEDAQRLFERMLS--KDLVTWTVMIGAYA-DCNAYESLVL 188
Query: 121 LKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGLLNN-----EIPLANSVMSMY 175
M G+ V+VV+ C+ + G +MH + + ++ L +++ MY
Sbjct: 189 FDRMREEGVVPDKVAMVTVVNACA-KLG-AMHRARFANDYIVRNGFSLDVILGTAMIDMY 246
Query: 176 AKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFL 235
AK G V AR +FD + E +++SW+ +I Y G +A L + M ++ P+ V F+
Sbjct: 247 AKCGSVESAREVFDRMKEKNVISWSAMIAAYGYHGRGKDAIDLFHMMLSCAILPNRVTFV 306
Query: 236 NLILGCAQVGNLFLALS-MHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAV-L 293
+L+ C+ G + L +S+ + + +V + + G L+ A R+ +A+ +
Sbjct: 307 SLLYACSHAGLIEEGLRFFNSMWEEHAVRPDVKHYTCMVDLLGRAGRLDEALRLIEAMTV 366
Query: 294 EKSVFLWTSMIGG 306
EK LW++++G
Sbjct: 367 EKDERLWSALLGA 379
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 136/277 (49%), Gaps = 7/277 (2%)
Query: 235 LNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLE 294
++L+L C N+F +H+ ++ +G + + N L+ Y + ++ A +FD +
Sbjct: 7 IDLLLRCR---NVFHIRQVHAHVVANGTLQDLVIANKLLYTYAQHKAIDDAYSLFDGLTM 63
Query: 295 KSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEI 354
+ W+ M+GG+A+ G + F+ LL+ V P+ TL + C + L G+ I
Sbjct: 64 RDSKTWSVMVGGFAKAGDHAGCYATFRELLRCGVTPDNYTLPFVIRTCRDRTDLQIGRVI 123
Query: 355 EEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMG 414
+ ++ +GL S+ V SL+ M++KC + A+ +FER+ KDL W+ MI YA
Sbjct: 124 HDVVLKHGLLSDHFVCASLVDMYAKCIVVEDAQRLFERMLSKDLVTWTVMIGAYA-DCNA 182
Query: 415 DQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYL 474
++L LF +M+ EG+ PD V ++++AC+ G + F G +
Sbjct: 183 YESLVLFDRMRE-EGVVPDKVAMVTVVNACAKLGAMHRA-RFANDYIVRNGFSLDVILGT 240
Query: 475 CLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSA 511
++D+ + G + A + M E W+ +++A
Sbjct: 241 AMIDMYAKCGSVESAREVFDRMK-EKNVISWSAMIAA 276
>gi|449440989|ref|XP_004138266.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
gi|449524140|ref|XP_004169081.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 695
Score = 347 bits (889), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 192/593 (32%), Positives = 323/593 (54%), Gaps = 17/593 (2%)
Query: 35 LVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLID----MYSKCSDFVSSRKVLDE 90
L+L+ C D ++VH+H+LK D + +++ + D+ S + +
Sbjct: 26 LILQQCKTPK---DLQQVHAHLLKTRRLLDPIITEAVLESAALLLPDTIDYALS--IFNH 80
Query: 91 MPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCS----FR 146
+ S ++N +I + D A+L+ K+M ++ TF SV+ CS R
Sbjct: 81 IDKPESS--AYNVMIRGLAFKRSPDNALLLFKKMHEKSVQHDKFTFSSVLKACSRMKALR 138
Query: 147 QGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGY 206
+G +H + K G +NE + N+++ MYA G++ AR +FD + E SIV+W +++ GY
Sbjct: 139 EGEQVHALILKSGFKSNEF-VENTLIQMYANCGQIGVARHVFDGMPERSIVAWNSMLSGY 197
Query: 207 VNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNED 266
G +E L ++ + + D V +++++ C ++ NL + + ++ G +
Sbjct: 198 TKNGLWDEVVKLFRKILELRIEFDDVTMISVLMACGRLANLEIGELIGEYIVSKGLRRNN 257
Query: 267 PLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKT 326
L L+ MY KCG ++ AR++FD + ++ V W++MI GYAQ EA+NLF + K
Sbjct: 258 TLTTSLIDMYAKCGQVDTARKLFDEMDKRDVVAWSAMISGYAQADRCKEALNLFHEMQKG 317
Query: 327 SVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKA 386
+V PNE T+ + L +CA LG+ GK + YI ++ + T LI ++KCG I+++
Sbjct: 318 NVYPNEVTMVSVLYSCAMLGAYETGKWVHFYIKKKKMKLTVTLGTQLIDFYAKCGYIDRS 377
Query: 387 KEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSH 446
EVF+ + K++ W+A+I G A +G G AL F M +KP+ V + +LSACSH
Sbjct: 378 VEVFKEMSFKNVFTWTALIQGLANNGEGKMALEFFSSMLE-NDVKPNDVTFIGVLSACSH 436
Query: 447 SGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWA 506
+ +VD G F SM+ +F IEP IEHY C+VD+LGRAG + A + I MP A VW
Sbjct: 437 ACLVDQGRHLFNSMRRDFDIEPRIEHYGCMVDILGRAGFLEEAYQFIDNMPFPPNAVVWR 496
Query: 507 PLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRR 566
LL++C H N+E+ E + +++ L P +G+YIL++N + G ++A R L+ ++
Sbjct: 497 TLLASCRAHKNIEMAEKSLEHITRLEPAHSGDYILLSNTYALVGRVEDAIRVRSLIKEKE 556
Query: 567 LTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKELHIKLLEAGYIAEAD 619
+ K PG S +E+DG V F + D H S +I L ++ ++ GY+ D
Sbjct: 557 IKKIPGCSLIELDGVVHEFFSEDGEHKHSKEIHDALDKMMKQIKRLGYVPNTD 609
Score = 206 bits (525), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 126/446 (28%), Positives = 225/446 (50%), Gaps = 28/446 (6%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MIR S + L + M + V + FTF VLKAC+ + ++ +G++VH+ +LK G
Sbjct: 92 MIRGLAFKRSPDNALLLFKKMHEKSVQHDKFTFSSVLKACSRMKALREGEQVHALILKSG 151
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F+ + FV+ LI MY+ C +R V D MP RS+V+WNS++S +++ L DE + +
Sbjct: 152 FKSNEFVENTLIQMYANCGQIGVARHVFDGMPE--RSIVAWNSMLSGYTKNGLWDEVVKL 209
Query: 121 LKEMWVLGLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
+++ L +E T +SV+ C + G + + GL N L S++ MYA
Sbjct: 210 FRKILELRIEFDDVTMISVLMACGRLANLEIGELIGEYIVSKGLRRNNT-LTTSLIDMYA 268
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K G+V+ AR +FDE+ + +V+W+ +I GY EA L ++M++ +V P+ V ++
Sbjct: 269 KCGQVDTARKLFDEMDKRDVVAWSAMISGYAQADRCKEALNLFHEMQKGNVYPNEVTMVS 328
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
++ CA +G +H + K L L+ Y KCG ++ + VF + K+
Sbjct: 329 VLYSCAMLGAYETGKWVHFYIKKKKMKLTVTLGTQLIDFYAKCGYIDRSVEVFKEMSFKN 388
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEE 356
VF WT++I G A G A+ F +L+ V+PN+ T LSAC+ + +G+ +
Sbjct: 389 VFTWTALIQGLANNGEGKMALEFFSSMLENDVKPNDVTFIGVLSACSHACLVDQGRHL-- 446
Query: 357 YIVLNGLESNRQVQTSLIH------MFSKCGRINKAKEVFERVP-DKDLAVWSAMINGYA 409
N + + ++ + H + + G + +A + + +P + VW ++
Sbjct: 447 ---FNSMRRDFDIEPRIEHYGCMVDILGRAGFLEEAYQFIDNMPFPPNAVVWRTLLASCR 503
Query: 410 IHG---MGDQALNLFYKMQHVEGLKP 432
H M +++L +H+ L+P
Sbjct: 504 AHKNIEMAEKSL------EHITRLEP 523
>gi|296081733|emb|CBI20738.3| unnamed protein product [Vitis vinifera]
Length = 865
Score = 347 bits (889), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 193/627 (30%), Positives = 335/627 (53%), Gaps = 15/627 (2%)
Query: 6 TNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDA 65
+N+G+ +E L + + + T VLK C N +W + VH + +K+G + D
Sbjct: 159 SNDGNAQEGLHLFRLLRASLGSTTRMTLAPVLKLCLNSGCLWAAEGVHGYAIKIGLEWDV 218
Query: 66 FVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMW 125
FV L+++YSKC +R + D M R R VV WN ++ + + L EA + E
Sbjct: 219 FVSGALVNIYSKCGRMRDARLLFDWM--RERDVVLWNMMLKGYVQLGLEKEAFQLFSEFH 276
Query: 126 VLGLELSASTFVSVVSGC------SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFG 179
GL + +++GC G +H K GL ++++ +ANS+++MY+K G
Sbjct: 277 RSGLRPDEFSVQLILNGCLWAGTDDLELGKQVHGIAVKSGL-DSDVSVANSLVNMYSKMG 335
Query: 180 KVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLIL 239
AR +F+++ ++SW ++I E+ L + + PD ++ L
Sbjct: 336 CAYFAREVFNDMKHLDLISWNSMISSCAQSSLEEESVNLFIDLLHEGLKPDHFTLASITL 395
Query: 240 GCAQVGNLFLAL-----SMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLE 294
A L L +H+ +K+G++++ +++ ++ MY KCGD+ A VF+ +
Sbjct: 396 ATAAKACGCLVLLDQGKQIHAHAIKAGFDSDLHVNSGILDMYIKCGDMVNAGIVFNYISA 455
Query: 295 KSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEI 354
WTSMI G G +A+ ++ R+ ++ V P+E T AT + A + + +L +G+++
Sbjct: 456 PDDVAWTSMISGCVDNGNEDQALRIYHRMRQSRVMPDEYTFATLIKASSCVTALEQGRQL 515
Query: 355 EEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMG 414
++ S+ V TSL+ M++KCG I A +F+++ +++A+W+AM+ G A HG
Sbjct: 516 HANVIKLDCVSDPFVGTSLVDMYAKCGNIEDAYRLFKKMNVRNIALWNAMLVGLAQHGNA 575
Query: 415 DQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYL 474
++A+NLF M+ G++PD V + ILSACSH+G+ + + SM +++GIEP IEHY
Sbjct: 576 EEAVNLFKSMKS-HGIEPDRVSFIGILSACSHAGLTSEAYEYLHSMPNDYGIEPEIEHYS 634
Query: 475 CLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPG 534
CLVD LGRAG A K I MP + A + LL AC +VE G+ A L L P
Sbjct: 635 CLVDALGRAGLVQEADKVIETMPFKASASINRALLGACRIQGDVETGKRVAARLFALEPF 694
Query: 535 STGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHL 594
+ Y+L++N++ +A W + AR +M + + K+PG+S +++ + +FV DRSH
Sbjct: 695 DSAAYVLLSNIYAAANRWDDVTDARKMMKRKNVKKDPGFSWIDVKNMLHLFVVDDRSHPQ 754
Query: 595 SVDIRKTLKELHIKLLEAGYIAEADIV 621
+ I ++E+ + E GY+ + + V
Sbjct: 755 ADIIYDKVEEMMKTIREDGYVPDTEFV 781
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 105/306 (34%), Positives = 163/306 (53%), Gaps = 27/306 (8%)
Query: 167 LANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYV-----NVGNVNEAFGLCNQ 221
L+N++++MY+K G ++ AR +FD E +V+W I+G Y N GN E L
Sbjct: 114 LSNNLLTMYSKCGSLSSARQVFDTTPERDLVTWNAILGAYAASVDSNDGNAQEGLHLFRL 173
Query: 222 MR-------RMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVS 274
+R RM++ P L + LN GC L+ A +H +K G + + LV+
Sbjct: 174 LRASLGSTTRMTLAPVLKLCLN--SGC-----LWAAEGVHGYAIKIGLEWDVFVSGALVN 226
Query: 275 MYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEAT 334
+Y+KCG + AR +FD + E+ V LW M+ GY QLG EA LF ++ +RP+E +
Sbjct: 227 IYSKCGRMRDARLLFDWMRERDVVLWNMMLKGYVQLGLEKEAFQLFSEFHRSGLRPDEFS 286
Query: 335 LATTLSACAELGS--LSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFER 392
+ L+ C G+ L GK++ V +GL+S+ V SL++M+SK G A+EVF
Sbjct: 287 VQLILNGCLWAGTDDLELGKQVHGIAVKSGLDSDVSVANSLVNMYSKMGCAYFAREVFND 346
Query: 393 VPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSIL-----SACSHS 447
+ DL W++MI+ A + ++++NLF + H EGLKPD SI AC
Sbjct: 347 MKHLDLISWNSMISSCAQSSLEEESVNLFIDLLH-EGLKPDHFTLASITLATAAKACGCL 405
Query: 448 GMVDDG 453
++D G
Sbjct: 406 VLLDQG 411
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 83/278 (29%), Positives = 141/278 (50%), Gaps = 14/278 (5%)
Query: 246 NLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIG 305
NL L H+ ++ SG + L N L++MY+KCG L AR+VFD E+ + W +++G
Sbjct: 92 NLLLGKCTHARIVVSGSAGDHFLSNNLLTMYSKCGSLSSARQVFDTTPERDLVTWNAILG 151
Query: 306 GYA-----QLGYPSEAVNLFKRLLKTSV-RPNEATLATTLSACAELGSLSKGKEIEEYIV 359
YA G E ++LF RLL+ S+ TLA L C G L + + Y +
Sbjct: 152 AYAASVDSNDGNAQEGLHLF-RLLRASLGSTTRMTLAPVLKLCLNSGCLWAAEGVHGYAI 210
Query: 360 LNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALN 419
GLE + V +L++++SKCGR+ A+ +F+ + ++D+ +W+ M+ GY G+ +A
Sbjct: 211 KIGLEWDVFVSGALVNIYSKCGRMRDARLLFDWMRERDVVLWNMMLKGYVQLGLEKEAFQ 270
Query: 420 LFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQS---NFGIEPSIEHYLCL 476
LF + H GL+PD IL+ C +G D L K + G++ + L
Sbjct: 271 LFSEF-HRSGLRPDEFSVQLILNGCLWAGT--DDLELGKQVHGIAVKSGLDSDVSVANSL 327
Query: 477 VDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMK 514
V++ + G A + ++M + W ++S+C +
Sbjct: 328 VNMYSKMGCAYFAREVFNDMK-HLDLISWNSMISSCAQ 364
Score = 112 bits (279), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 81/306 (26%), Positives = 145/306 (47%), Gaps = 13/306 (4%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVL-----KACANINSIWDGKRVHSH 55
MI + + EE+++ + +L G+ + FT + KAC + + GK++H+H
Sbjct: 358 MISSCAQSSLEEESVNLFIDLLHEGLKPDHFTLASITLATAAKACGCLVLLDQGKQIHAH 417
Query: 56 VLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLND 115
+K GF D V +G++DMY KC D V++ V + + V+W S+IS D
Sbjct: 418 AIKAGFDSDLHVNSGILDMYIKCGDMVNAGIVFNYISA--PDDVAWTSMISGCVDNGNED 475
Query: 116 EAILVLKEMWVLGLELSASTFVSVV--SGC--SFRQGISMHCCVYKLGLLNNEIPLANSV 171
+A+ + M + TF +++ S C + QG +H V KL +++ + S+
Sbjct: 476 QALRIYHRMRQSRVMPDEYTFATLIKASSCVTALEQGRQLHANVIKLDCVSDPF-VGTSL 534
Query: 172 MSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDL 231
+ MYAK G + +A +F ++ +I W ++ G GN EA L M+ + PD
Sbjct: 535 VDMYAKCGNIEDAYRLFKKMNVRNIALWNAMLVGLAQHGNAEEAVNLFKSMKSHGIEPDR 594
Query: 232 VVFLNLILGCAQVGNLFLALS-MHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFD 290
V F+ ++ C+ G A +HS+ G E + LV + G ++ A +V +
Sbjct: 595 VSFIGILSACSHAGLTSEAYEYLHSMPNDYGIEPEIEHYSCLVDALGRAGLVQEADKVIE 654
Query: 291 AVLEKS 296
+ K+
Sbjct: 655 TMPFKA 660
>gi|297829922|ref|XP_002882843.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297328683|gb|EFH59102.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 627
Score = 347 bits (889), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 182/518 (35%), Positives = 294/518 (56%), Gaps = 6/518 (1%)
Query: 109 SRACLNDEAILVLKEMWVLGLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNE 164
S+ C N L EM +LG E+ + ++++ C + R+G +H + K L
Sbjct: 27 SQLCSNGRLQEALLEMVMLGPEIGFHCYDALLNACLDKRALREGQRVHAHMIKTRYLPAT 86
Query: 165 IPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRR 224
L ++ Y K + +AR + DE+ E ++VSWT +I Y G+ +EA + +M R
Sbjct: 87 Y-LRTRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALSVFAEMMR 145
Query: 225 MSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLEL 284
P+ F ++ C + L L +H L++K Y++ + + L+ MY K G +E
Sbjct: 146 SDGKPNEFTFATVLTSCIRASGLALGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIEE 205
Query: 285 ARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAE 344
AR +F+ + E+ V T++I GYAQLG EA+ +F+RL +RPN T A+ L+A +
Sbjct: 206 AREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFQRLQSEGMRPNYVTYASLLTALSG 265
Query: 345 LGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAM 404
L L GK+ +++ L +Q SLI M+SKCG ++ A+ +F+ +P++ W+AM
Sbjct: 266 LALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYAQRLFDNMPERTAISWNAM 325
Query: 405 INGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSM-QSN 463
+ GY+ HG+G + L LF M+ + +KPDAV ++LS CSH M D GLS + M
Sbjct: 326 LVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGKMEDTGLSIYDGMVAGE 385
Query: 464 FGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEY 523
+GI+P EHY C+VD+LGRAGR D A + I MP + A V LL AC H +V++GEY
Sbjct: 386 YGIKPDTEHYGCIVDMLGRAGRIDEAFEFIKRMPSKPTAGVLGSLLGACRVHLSVDIGEY 445
Query: 524 AAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQ 583
L+ + P + GNY++++NL+ SAG W++ R +M + +TKEPG S ++ + ++
Sbjct: 446 VGHRLIEIEPENAGNYVILSNLYASAGRWEDVNNVRAMMMQKAVTKEPGRSWIQHEQTLH 505
Query: 584 VFVAGDRSHHLSVDIRKTLKELHIKLLEAGYIAEADIV 621
F A DR+H ++ +KE+ IK+ +AGY+ + V
Sbjct: 506 YFHANDRTHPRREEVLAKMKEISIKMKQAGYVPDISCV 543
Score = 192 bits (489), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 122/413 (29%), Positives = 220/413 (53%), Gaps = 14/413 (3%)
Query: 7 NNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAF 66
+NG +E L M+ G + +L AC + ++ +G+RVH+H++K + +
Sbjct: 31 SNGRLQEALL---EMVMLGPEIGFHCYDALLNACLDKRALREGQRVHAHMIKTRYLPATY 87
Query: 67 VQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWV 126
++T L+ Y KC +RKVLDEMP ++VVSW ++IS +S+ + EA+ V EM
Sbjct: 88 LRTRLLIFYGKCDCLEDARKVLDEMPE--KNVVSWTAMISRYSQTGHSSEALSVFAEMMR 145
Query: 127 LGLELSASTFVSVVSGCSFRQGISMHCCVYKLGL---LNNEIPLANSVMSMYAKFGKVNE 183
+ + TF +V++ C G+++ ++ L + ++ I + +S++ MYAK G++ E
Sbjct: 146 SDGKPNEFTFATVLTSCIRASGLALGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIEE 205
Query: 184 ARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQ 243
AR IF+ + E +VS T II GY +G EA + +++ + P+ V + +L+ +
Sbjct: 206 AREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFQRLQSEGMRPNYVTYASLLTALSG 265
Query: 244 VGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSM 303
+ L H +L+ L N L+ MY+KCG+L A+R+FD + E++ W +M
Sbjct: 266 LALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYAQRLFDNMPERTAISWNAM 325
Query: 304 IGGYAQLGYPSEAVNLFKRLLK--TSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLN 361
+ GY++ G E + LF RL++ V+P+ TL LS C+ G I + +V
Sbjct: 326 LVGYSKHGLGREVLELF-RLMRDEKRVKPDAVTLLAVLSGCSHGKMEDTGLSIYDGMVAG 384
Query: 362 --GLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLA-VWSAMINGYAIH 411
G++ + + ++ M + GRI++A E +R+P K A V +++ +H
Sbjct: 385 EYGIKPDTEHYGCIVDMLGRAGRIDEAFEFIKRMPSKPTAGVLGSLLGACRVH 437
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 74/252 (29%), Positives = 129/252 (51%), Gaps = 16/252 (6%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI + G E LS ++ M+++ N FTF VL +C + + GK++H ++K
Sbjct: 123 MISRYSQTGHSSEALSVFAEMMRSDGKPNEFTFATVLTSCIRASGLALGKQIHGLIVKWN 182
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+ FV + L+DMY+K +R++ + +P R VVS +II+ +++ L++EA+ +
Sbjct: 183 YDSHIFVGSSLLDMYAKAGQIEEAREIFECLPE--RDVVSCTAIIAGYAQLGLDEEALEM 240
Query: 121 LKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIP----LANSVM 172
+ + G+ + T+ S+++ S G HC V L E+P L NS++
Sbjct: 241 FQRLQSEGMRPNYVTYASLLTALSGLALLDHGKQAHCHV-----LRRELPFYAVLQNSLI 295
Query: 173 SMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMR-RMSVTPDL 231
MY+K G ++ A+ +FD + E + +SW ++ GY G E L MR V PD
Sbjct: 296 DMYSKCGNLSYAQRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDA 355
Query: 232 VVFLNLILGCAQ 243
V L ++ GC+
Sbjct: 356 VTLLAVLSGCSH 367
>gi|296088738|emb|CBI38188.3| unnamed protein product [Vitis vinifera]
Length = 744
Score = 347 bits (889), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 202/627 (32%), Positives = 329/627 (52%), Gaps = 37/627 (5%)
Query: 29 NSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVL 88
NS + L+ C + GK +H +LK G D F L++MY K + K+
Sbjct: 37 NSHAYANALQDCIQKDEPSRGKGLHCEILKRGGCLDLFAWNILLNMYVKSDFLCDASKLF 96
Query: 89 DEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSV----VSGCS 144
DEMP R + +S+ ++I ++ + EAI + + G EL+ F ++ VS
Sbjct: 97 DEMPER--NTISFVTLIQGYAESVRFLEAIELFVRLHREGHELNPFVFTTILKLLVSTDC 154
Query: 145 FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIG 204
G +H C++KLG +N + +++ Y+ G+V+ AR +FD I +VSWT ++
Sbjct: 155 GELGWGIHACIFKLGHESNAF-VGTALIDAYSVCGRVDVAREVFDGILYKDMVSWTGMVT 213
Query: 205 GYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNN 264
+ EA L +QMR + P+ F ++ C + + S+H LKS Y
Sbjct: 214 CFAENDCFKEALKLFSQMRMVGFKPNNFTFASVFKACLGLEAFDVGKSVHGCALKSRYEL 273
Query: 265 EDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLL 324
+ + L+ +YTK GD++ ARR F+ + +K V W+ MI YAQ EAV +F ++
Sbjct: 274 DLYVGVALLDLYTKSGDIDDARRAFEEIPKKDVIPWSFMIARYAQSDQSKEAVEMFFQMR 333
Query: 325 KTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRIN 384
+ V PN+ T A+ L ACA + L+ G +I +++ GL S+ V +L+ +++KCGR+
Sbjct: 334 QALVLPNQFTFASVLQACATMEGLNLGNQIHCHVIKIGLHSDVFVSNALMDVYAKCGRME 393
Query: 385 KAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLF-----YKMQHVE----------- 428
+ E+F P ++ W+ +I G+ G G++AL LF Y++Q E
Sbjct: 394 NSMELFAESPHRNDVTWNTVIVGHVQLGDGEKALRLFLNMLEYRVQATEVTYSSALRACA 453
Query: 429 --------------GLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYL 474
+KPD + + +LSAC+++G++D G ++F SM + GIEP IEHY
Sbjct: 454 SLAALEPGLQIHSLTVKPDKLTFVGVLSACANAGLLDQGQAYFTSMIQDHGIEPCIEHYT 513
Query: 475 CLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPG 534
C+V LLGR G D A+K I E+P + VW LL AC+ H+++ELG +A+ +L + P
Sbjct: 514 CMVWLLGRGGHLDKAVKLIDEIPFQPSVMVWRALLGACVIHNDIELGRISAQRVLEMEPQ 573
Query: 535 STGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHL 594
++L++N++ +A W A+ R M + + KEPG S +E G+V F GD SH
Sbjct: 574 DKATHVLLSNMYATAKRWDNVASVRKNMKRKGVKKEPGLSWIESQGTVHSFTVGDTSHPE 633
Query: 595 SVDIRKTLKELHIKLLEAGYIAEADIV 621
I L+ LH+K +AGYI ++V
Sbjct: 634 VRVINGMLEWLHMKTKKAGYIPNYNVV 660
Score = 138 bits (347), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 101/372 (27%), Positives = 182/372 (48%), Gaps = 30/372 (8%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
M+ N F+E L +S M G N+FTF V KAC + + GK VH LK
Sbjct: 211 MVTCFAENDCFKEALKLFSQMRMVGFKPNNFTFASVFKACLGLEAFDVGKSVHGCALKSR 270
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
++ D +V L+D+Y+K D +R+ +E+P + V+ W+ +I+ ++++ + EA+ +
Sbjct: 271 YELDLYVGVALLDLYTKSGDIDDARRAFEEIPK--KDVIPWSFMIARYAQSDQSKEAVEM 328
Query: 121 LKEMWVLGLELSASTFVSVVSGCSFRQGISM----HCCVYKLGLLNNEIPLANSVMSMYA 176
+M + + TF SV+ C+ +G+++ HC V K+G L++++ ++N++M +YA
Sbjct: 329 FFQMRQALVLPNQFTFASVLQACATMEGLNLGNQIHCHVIKIG-LHSDVFVSNALMDVYA 387
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K G++ + +F E + V+W T+I G+V +G+ +A L M V V + +
Sbjct: 388 KCGRMENSMELFAESPHRNDVTWNTVIVGHVQLGDGEKALRLFLNMLEYRVQATEVTYSS 447
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKC---GDLELARRVF---- 289
+ CA + L L +HSL +K P V + + C G L+ + F
Sbjct: 448 ALRACASLAALEPGLQIHSLTVK-------PDKLTFVGVLSACANAGLLDQGQAYFTSMI 500
Query: 290 -DAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACA----- 343
D +E + +T M+ + G+ +AV L + +P+ L AC
Sbjct: 501 QDHGIEPCIEHYTCMVWLLGRGGHLDKAVKLIDEI---PFQPSVMVWRALLGACVIHNDI 557
Query: 344 ELGSLSKGKEIE 355
ELG +S + +E
Sbjct: 558 ELGRISAQRVLE 569
>gi|413952892|gb|AFW85541.1| hypothetical protein ZEAMMB73_780855 [Zea mays]
Length = 787
Score = 347 bits (889), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 200/577 (34%), Positives = 319/577 (55%), Gaps = 14/577 (2%)
Query: 44 NSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNS 103
N + +H + G+ D FV + L +Y K S +RKV D +P + WN+
Sbjct: 128 NDAAAARTLHGLSVAAGYAADTFVASALAKLYFKLSRGDDARKVFDTVPSP--DTILWNT 185
Query: 104 IISAHSRACLNDEAILVLKEMWVLG-LELSASTFVSVVSGCSFRQGISMHCCVY----KL 158
+++ EA+ M G + ++T S + + ++M CV+ K
Sbjct: 186 LLAGLP----GSEALEAFVRMVDAGRVRPDSTTLASSLRAAAEASHMAMGRCVHGYGVKC 241
Query: 159 GLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGL 218
GL +E + +MS+Y+K G ++ A+ +FD + +V++ +I GY G V + L
Sbjct: 242 GLAEHE-HVVTGLMSLYSKCGDMDSAQFLFDRMDNPDLVAYNALISGYSVNGMVESSVEL 300
Query: 219 CNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTK 278
++ P+ + +I + G+ LA +H+ ++K+ + + + L ++Y +
Sbjct: 301 FKELTASGWRPNSSTLVAVIPVYSPFGHELLARCLHAFVVKARLDADALVSTALTTLYCR 360
Query: 279 CGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATT 338
D+E AR +FDA+LEK++ W +MI GYAQ G AV LF+ + + +V+PN T+++T
Sbjct: 361 LNDMESARSIFDAMLEKTMESWNAMISGYAQNGLTEMAVALFQLMQELNVQPNPITISST 420
Query: 339 LSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDL 398
LSACA LG+LS GK + I LE N V T+LI M++KCG I +A+ +F+R+ +K++
Sbjct: 421 LSACAHLGALSLGKWVHRIISKEKLELNVYVMTALIDMYAKCGSIAEARSIFDRMDNKNV 480
Query: 399 AVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFK 458
W+AMI+GY +HG G +AL L+ M L P + + S++ ACSH G+VD+G F+
Sbjct: 481 VSWNAMISGYGLHGQGAEALKLYKDMLDARIL-PTSSTFLSVIYACSHGGLVDEGQKVFR 539
Query: 459 SMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVE-VQAQVWAPLLSACMKHHN 517
M + + I P IEH C+VDLLGRAG+ + AL+ I E P + VW LL ACM H N
Sbjct: 540 VMTNEYRITPGIEHCTCMVDLLGRAGKLNEALELISEFPQSAIGPGVWGALLGACMVHKN 599
Query: 518 VELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVE 577
+L + A++ L L+ + G Y+L++NL+TS + EAA R R+L K PG + +E
Sbjct: 600 SDLAKLASQKLFELDSENAGYYVLLSNLYTSKKHYSEAAVVRQEAKTRKLVKTPGCTLIE 659
Query: 578 IDGSVQVFVAGDRSHHLSVDIRKTLKELHIKLLEAGY 614
I VF+AGD H S I L+ L K++EAGY
Sbjct: 660 IGDRPHVFMAGDHLHPQSEAIYSYLERLTAKMIEAGY 696
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 117/419 (27%), Positives = 210/419 (50%), Gaps = 23/419 (5%)
Query: 13 ETLSTYSSMLQTG-VHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGL 71
E L + M+ G V +S T L+A A + + G+ VH + +K G + V TGL
Sbjct: 194 EALEAFVRMVDAGRVRPDSTTLASSLRAAAEASHMAMGRCVHGYGVKCGLAEHEHVVTGL 253
Query: 72 IDMYSKCSDFVSSRKVLDEM--PVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGL 129
+ +YSKC D S++ + D M P +V++N++IS +S + + ++ + KE+ G
Sbjct: 254 MSLYSKCGDMDSAQFLFDRMDNP----DLVAYNALISGYSVNGMVESSVELFKELTASGW 309
Query: 130 ELSASTFVSVVSGCS-FRQGI---SMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEAR 185
++ST V+V+ S F + +H V K L+ + ++ ++ ++Y + + AR
Sbjct: 310 RPNSSTLVAVIPVYSPFGHELLARCLHAFVVK-ARLDADALVSTALTTLYCRLNDMESAR 368
Query: 186 SIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVG 245
SIFD + E ++ SW +I GY G A L M+ ++V P+ + + + CA +G
Sbjct: 369 SIFDAMLEKTMESWNAMISGYAQNGLTEMAVALFQLMQELNVQPNPITISSTLSACAHLG 428
Query: 246 NLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIG 305
L L +H ++ K + L+ MY KCG + AR +FD + K+V W +MI
Sbjct: 429 ALSLGKWVHRIISKEKLELNVYVMTALIDMYAKCGSIAEARSIFDRMDNKNVVSWNAMIS 488
Query: 306 GYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEI-----EEYIVL 360
GY G +EA+ L+K +L + P +T + + AC+ G + +G+++ EY +
Sbjct: 489 GYGLHGQGAEALKLYKDMLDARILPTSSTFLSVIYACSHGGLVDEGQKVFRVMTNEYRIT 548
Query: 361 NGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDL--AVWSAMINGYAIHGMGDQA 417
G+E T ++ + + G++N+A E+ P + VW A++ +H D A
Sbjct: 549 PGIEHC----TCMVDLLGRAGKLNEALELISEFPQSAIGPGVWGALLGACMVHKNSDLA 603
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 105/213 (49%), Gaps = 12/213 (5%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI NG E ++ + M + V N T L ACA++ ++ GK VH + K
Sbjct: 385 MISGYAQNGLTEMAVALFQLMQELNVQPNPITISSTLSACAHLGALSLGKWVHRIISKEK 444
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+ + +V T LIDMY+KC +R + D M ++VVSWN++IS + EA+ +
Sbjct: 445 LELNVYVMTALIDMYAKCGSIAEARSIFDRMDN--KNVVSWNAMISGYGLHGQGAEALKL 502
Query: 121 LKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGLLNNE------IPLANSVMSM 174
K+M + ++STF+SV+ CS + V++ ++ NE I ++ +
Sbjct: 503 YKDMLDARILPTSSTFLSVIYACSHGGLVDEGQKVFR--VMTNEYRITPGIEHCTCMVDL 560
Query: 175 YAKFGKVNEARSIFDEIGETSIVS--WTTIIGG 205
+ GK+NEA + E +++I W ++G
Sbjct: 561 LGRAGKLNEALELISEFPQSAIGPGVWGALLGA 593
>gi|225442904|ref|XP_002264123.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930 [Vitis vinifera]
Length = 724
Score = 346 bits (888), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 201/621 (32%), Positives = 326/621 (52%), Gaps = 45/621 (7%)
Query: 32 TFPL-VLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSK--CSDFVSSRKVL 88
T PL ++K C ++ + K++HS + G + V +I K D +R V
Sbjct: 20 TPPLSLIKTCKSMAQL---KQIHSQTICTGLISNPIVPAQIIAFCCKHELGDMEYARMVF 76
Query: 89 DEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVS----GCS 144
D MP V WN++I +SR + A+ + EM G+ T+ ++ +
Sbjct: 77 DTMPGPNHFV--WNNMIKGYSRVGCPNSAVSMYCEMLERGVMPDEYTYPFLLKRFTRDTA 134
Query: 145 FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIG 204
+ G +H + KLG +N + + N+++ +Y+ G+V+ AR +FD + +V+W +I
Sbjct: 135 VKCGRELHDHIVKLGFSSN-VFVQNALIHLYSLSGEVSVARGVFDRSSKGDVVTWNVMIS 193
Query: 205 GYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNN 264
GY +E+ L ++M RM V P + ++++ C+++ +L + +H +
Sbjct: 194 GYNRSKQFDESMKLFDEMERMRVLPSSITLVSVLSACSKLKDLNVGKRVHRYVKDLKIEP 253
Query: 265 EDPLDNLLVSMYTKCGDLE-------------------------------LARRVFDAVL 293
L+N L+ MY CGD++ LAR FD +
Sbjct: 254 VRVLENALIDMYAACGDMDTALGIFDNMKSRDVISWTAIVTGFTNLGQVGLARNYFDKMP 313
Query: 294 EKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKE 353
E+ WT+MI GY Q+ E ++LF+ + +++P+E T+ + L+ACA LG+L G+
Sbjct: 314 ERDFVSWTAMIDGYLQVNRFKEVLSLFREMQAANIKPDEFTMVSILTACAHLGALELGEW 373
Query: 354 IEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGM 413
I+ YI N ++ + V +LI M+ CG + KA +F +P +D W+A+I G AI+G
Sbjct: 374 IKAYIDKNEIKIDSFVGNALIDMYFNCGNVEKAIRIFNAMPHRDKISWTAVIFGLAINGY 433
Query: 414 GDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHY 473
G++AL++F +M + PD V +L AC+HSGMVD G FF M + GIEP++ HY
Sbjct: 434 GEEALDMFSQMLKA-SITPDEVTCIGVLCACTHSGMVDKGKKFFARMTTQHGIEPNVAHY 492
Query: 474 LCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNP 533
C+VDLLGRAG A + I MPV+ + VW LL AC H + E+ E AA+ +L L P
Sbjct: 493 GCMVDLLGRAGHLKEAHEVIKNMPVKPNSIVWGSLLGACRVHRDEEMAEMAAQQILELEP 552
Query: 534 GSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHH 593
+ Y+L+ N++ + W++ R LM DR + K PG S +E++GSV FVAGD+ H
Sbjct: 553 ENGAVYVLLCNIYAACNRWEKLHEVRKLMMDRGIKKTPGCSLIEMNGSVHEFVAGDQVHP 612
Query: 594 LSVDIRKTLKELHIKLLEAGY 614
S +I L E+ + L AGY
Sbjct: 613 QSKEIYSKLDEMSVDLKFAGY 633
Score = 205 bits (522), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 137/485 (28%), Positives = 235/485 (48%), Gaps = 45/485 (9%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI+ + G +S Y ML+ GV + +T+P +LK ++ G+ +H H++K+G
Sbjct: 90 MIKGYSRVGCPNSAVSMYCEMLERGVMPDEYTYPFLLKRFTRDTAVKCGRELHDHIVKLG 149
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F + FVQ LI +YS + +R V D VV+WN +IS ++R+ DE++ +
Sbjct: 150 FSSNVFVQNALIHLYSLSGEVSVARGVFDR--SSKGDVVTWNVMISGYNRSKQFDESMKL 207
Query: 121 LKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
EM + + S+ T VSV+S CS G +H V L + + L N+++ MYA
Sbjct: 208 FDEMERMRVLPSSITLVSVLSACSKLKDLNVGKRVHRYVKDLKIEPVRV-LENALIDMYA 266
Query: 177 -------------------------------KFGKVNEARSIFDEIGETSIVSWTTIIGG 205
G+V AR+ FD++ E VSWT +I G
Sbjct: 267 ACGDMDTALGIFDNMKSRDVISWTAIVTGFTNLGQVGLARNYFDKMPERDFVSWTAMIDG 326
Query: 206 YVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNE 265
Y+ V E L +M+ ++ PD ++++ CA +G L L + + + K+ +
Sbjct: 327 YLQVNRFKEVLSLFREMQAANIKPDEFTMVSILTACAHLGALELGEWIKAYIDKNEIKID 386
Query: 266 DPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLK 325
+ N L+ MY CG++E A R+F+A+ + WT++I G A GY EA+++F ++LK
Sbjct: 387 SFVGNALIDMYFNCGNVEKAIRIFNAMPHRDKISWTAVIFGLAINGYGEEALDMFSQMLK 446
Query: 326 TSVRPNEATLATTLSACAELGSLSKGKE-IEEYIVLNGLESNRQVQTSLIHMFSKCGRIN 384
S+ P+E T L AC G + KGK+ +G+E N ++ + + G +
Sbjct: 447 ASITPDEVTCIGVLCACTHSGMVDKGKKFFARMTTQHGIEPNVAHYGCMVDLLGRAGHLK 506
Query: 385 KAKEVFERVPDK-DLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYT---SI 440
+A EV + +P K + VW +++ +H D+ + Q +E + VY +I
Sbjct: 507 EAHEVIKNMPVKPNSIVWGSLLGACRVH--RDEEMAEMAAQQILELEPENGAVYVLLCNI 564
Query: 441 LSACS 445
+AC+
Sbjct: 565 YAACN 569
>gi|255538308|ref|XP_002510219.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550920|gb|EEF52406.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1113
Score = 346 bits (888), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 193/573 (33%), Positives = 315/573 (54%), Gaps = 6/573 (1%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+I + NG L + ML+ G T +L +C + ++ GK +H +K G
Sbjct: 514 LICGYSRNGYDFSALELFVQMLKLGFCPRQTTLVGLLPSCGQLELVFQGKSIHGFGIKSG 573
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
D V+ L MY+KC D ++ + +EM +SVVSWN++I A+ + DEA+ V
Sbjct: 574 LHLDPQVKNALTSMYAKCGDLEAAEYLFEEM--MDKSVVSWNTMIGAYGQNGFFDEAMFV 631
Query: 121 LKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGK 180
K M G+E+S T +S+ S + + S+HC K+GL ++ + S++ MYA++G
Sbjct: 632 FKRMIGAGVEVSQVTIMSLPSANANPE--SIHCYTIKVGLADDA-SVVTSLICMYARYGS 688
Query: 181 VNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILG 240
+ A ++ + + ++VS T II Y GN+ +QM ++++ PD V L+++ G
Sbjct: 689 TDHAELLYWSLPQKNLVSLTAIITSYAEAGNLGLVMESFSQMHQLNMKPDSVAMLSILHG 748
Query: 241 CAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLW 300
A ++ + H +KSG + + + N L+SMY+K ++E +F + EK + W
Sbjct: 749 IADPVHICIGHVFHGYAIKSGLDTFNLVTNGLISMYSKFNNVEALFGLFSGMHEKPLISW 808
Query: 301 TSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVL 360
S+I G Q G S A+ LF ++ P+ T+A+ LS C++LG L G+ + YI+
Sbjct: 809 NSVISGCVQAGRASHAIELFCQMKMHGCNPDAITIASLLSGCSQLGYLQFGERLHSYILR 868
Query: 361 NGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNL 420
N LE V T+LIHM++KCG I A+ VF+ + LA W+AMI+GY+ +G +AL
Sbjct: 869 NKLEMEDFVGTALIHMYTKCGSIVHAERVFKSIGKPCLATWNAMISGYSCYGFEHKALTC 928
Query: 421 FYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLL 480
+ +MQ +G++PD + + +L+AC+H G++ +G +F+ M + + P+++H C+V LL
Sbjct: 929 YSEMQE-QGVEPDKITFLGVLAACTHGGLIHEGRRYFQIMTKVYDMVPTLQHCACMVGLL 987
Query: 481 GRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYI 540
R G F+ AL I M E + VW LSAC H V+LGEY AK L L+ + G Y+
Sbjct: 988 ARVGLFEEALLFIKNMEKEPDSAVWGAFLSACCIHQEVKLGEYLAKKLYLLDCRNGGLYV 1047
Query: 541 LMANLFTSAGMWKEAATARGLMDDRRLTKEPGW 573
LM+NL+ G W + A R +M D GW
Sbjct: 1048 LMSNLYAVTGRWDDVARVREMMKDAGGDGNSGW 1080
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 115/423 (27%), Positives = 208/423 (49%), Gaps = 14/423 (3%)
Query: 35 LVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVR 94
L K ++++ + ++ +H++K G Q +V T L+D+Y K + D MP+
Sbjct: 447 LAPKGSNSLDANTEAIQIQNHLIKRGIDQFVYVSTALLDLYMKLGRVSYAHNAFDYMPI- 505
Query: 95 LRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCS----FRQGIS 150
R VVSWN++I +SR + A+ + +M LG +T V ++ C QG S
Sbjct: 506 -RDVVSWNALICGYSRNGYDFSALELFVQMLKLGFCPRQTTLVGLLPSCGQLELVFQGKS 564
Query: 151 MHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVG 210
+H K G L+ + + N++ SMYAK G + A +F+E+ + S+VSW T+IG Y G
Sbjct: 565 IHGFGIKSG-LHLDPQVKNALTSMYAKCGDLEAAEYLFEEMMDKSVVSWNTMIGAYGQNG 623
Query: 211 NVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDN 270
+EA + +M V V ++L A S+H +K G ++ +
Sbjct: 624 FFDEAMFVFKRMIGAGVEVSQVTIMSLPSANAN------PESIHCYTIKVGLADDASVVT 677
Query: 271 LLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRP 330
L+ MY + G + A ++ ++ +K++ T++I YA+ G + F ++ + +++P
Sbjct: 678 SLICMYARYGSTDHAELLYWSLPQKNLVSLTAIITSYAEAGNLGLVMESFSQMHQLNMKP 737
Query: 331 NEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVF 390
+ + + L A+ + G Y + +GL++ V LI M+SK + +F
Sbjct: 738 DSVAMLSILHGIADPVHICIGHVFHGYAIKSGLDTFNLVTNGLISMYSKFNNVEALFGLF 797
Query: 391 ERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMV 450
+ +K L W+++I+G G A+ LF +M+ + G PDA+ S+LS CS G +
Sbjct: 798 SGMHEKPLISWNSVISGCVQAGRASHAIELFCQMK-MHGCNPDAITIASLLSGCSQLGYL 856
Query: 451 DDG 453
G
Sbjct: 857 QFG 859
>gi|224057914|ref|XP_002299387.1| predicted protein [Populus trichocarpa]
gi|222846645|gb|EEE84192.1| predicted protein [Populus trichocarpa]
Length = 814
Score = 346 bits (888), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 200/641 (31%), Positives = 340/641 (53%), Gaps = 34/641 (5%)
Query: 11 FEETLSTYSSMLQTGVHGNSFTFPLVLKACANI---NSIWDGKRVHSHVLKVGFQQDAFV 67
+E + + ML G +SFT + AC+N+ + +W GK++H + G + F
Sbjct: 94 WEVAIKAFRLMLMEGFEPSSFTLVSMALACSNLRKRDGLWLGKQIHGCCFRKGHWR-TFS 152
Query: 68 QTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVL 127
L+ MY+K ++ +L + R +V+WNS+IS+ S+ EA++ L+ M +
Sbjct: 153 NNALMAMYAKLGRLDDAKSLL--VLFEDRDLVTWNSMISSFSQNERFMEALMFLRLMVLE 210
Query: 128 GLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNE 183
G++ TF SV+ CS R G +H + + + ++++ MY G+V
Sbjct: 211 GVKPDGVTFASVLPACSHLDLLRTGKEIHAYALRTDDVIENSFVGSALVDMYCNCGQVES 270
Query: 184 ARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMS-VTPDLVVFLNLILGCA 242
R +FD + + I W +I GY + +A L +M + + + +++
Sbjct: 271 GRLVFDSVLDRKIGLWNAMIAGYAQSEHDEKALMLFIEMEAAAGLYSNATTMSSIVPAYV 330
Query: 243 QVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTS 302
+ + +H ++K G L N L+ MY++ GD++ ++R+FD++ ++ + W +
Sbjct: 331 RCEGISRKEGIHGYVIKRGLETNRYLQNALIDMYSRMGDIKTSKRIFDSMEDRDIVSWNT 390
Query: 303 MIGGYAQLGYPSEAVNLFKRLLK----------------TSVRPNEATLATTLSACAELG 346
+I Y G S+A+ L + + +PN TL T L CA L
Sbjct: 391 IITSYVICGRSSDALLLLHEMQRIEEKSTYDGDYNDEKQVPFKPNSITLMTVLPGCASLS 450
Query: 347 SLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMIN 406
+L+KGKEI Y + N L S V ++L+ M++KCG +N A+ VF+++P +++ W+ +I
Sbjct: 451 ALAKGKEIHAYAIRNLLASQVTVGSALVDMYAKCGCLNLARRVFDQMPIRNVITWNVIIM 510
Query: 407 GYAIHGMGDQALNLFYKMQHVEG-----LKPDAVVYTSILSACSHSGMVDDGLSFFKSMQ 461
Y +HG G ++L LF M EG +KP V + ++ ++CSHSGMVD+GLS F M+
Sbjct: 511 AYGMHGKGKESLELFEDMV-AEGAKGGEVKPTEVTFIALFASCSHSGMVDEGLSLFHKMK 569
Query: 462 SNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEV-QAQVWAPLLSACMKHHNVEL 520
+ GIEP+ +HY C+VDL+GRAG+ + A ++ MP + W+ LL AC +HN+E+
Sbjct: 570 NEHGIEPAPDHYACIVDLVGRAGKVEEAYGLVNTMPSGFDKVGAWSSLLGACRIYHNIEI 629
Query: 521 GEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDG 580
GE AA+NLL L P +Y+L++N+++SAG+W +A R M + KEPG S +E
Sbjct: 630 GEIAAENLLQLQPDVASHYVLLSNIYSSAGLWDKAMNLRRRMKAMGVKKEPGCSWIEYGD 689
Query: 581 SVQVFVAGDRSHHLSVDIRKTLKELHIKLLEAGYIAEADIV 621
V F+AGD SH S + L+ L +L + GY+ + V
Sbjct: 690 EVHKFLAGDLSHPQSEKLHDFLETLSERLKKEGYVPDTACV 730
Score = 234 bits (597), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 151/511 (29%), Positives = 255/511 (49%), Gaps = 45/511 (8%)
Query: 21 MLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQ--QDAFVQTGLIDMYSKC 78
M+ +G ++F FP VLKA A I ++ GK++H+HV K G+ + L++MY KC
Sbjct: 1 MIGSGFSPDNFAFPAVLKAVAGIQELYLGKQIHAHVFKFGYGSFSSVTIDNTLVNMYGKC 60
Query: 79 SDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVS 138
+ KV D + R VSWNSIISA R + AI + M + G E S+ T VS
Sbjct: 61 GGLGDAYKVFDR--ITERDQVSWNSIISALCRFEEWEVAIKAFRLMLMEGFEPSSFTLVS 118
Query: 139 VVSGCS-FRQ------GISMHCCVYKLG---LLNNEIPLANSVMSMYAKFGKVNEARSIF 188
+ CS R+ G +H C ++ G +N N++M+MYAK G++++A+S+
Sbjct: 119 MALACSNLRKRDGLWLGKQIHGCCFRKGHWRTFSN-----NALMAMYAKLGRLDDAKSLL 173
Query: 189 DEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLF 248
+ +V+W ++I + EA M V PD V F +++ C+ + L
Sbjct: 174 VLFEDRDLVTWNSMISSFSQNERFMEALMFLRLMVLEGVKPDGVTFASVLPACSHLDLLR 233
Query: 249 LALSMHSLLLKSGYNNEDPLDN-----LLVSMYTKCGDLELARRVFDAVLEKSVFLWTSM 303
+H+ L++ +D ++N LV MY CG +E R VFD+VL++ + LW +M
Sbjct: 234 TGKEIHAYALRT----DDVIENSFVGSALVDMYCNCGQVESGRLVFDSVLDRKIGLWNAM 289
Query: 304 IGGYAQLGYPSEAVNLFKRLLKTS-VRPNEATLATTLSACAELGSLSKGKEIEEYIVLNG 362
I GYAQ + +A+ LF + + + N T+++ + A +S+ + I Y++ G
Sbjct: 290 IAGYAQSEHDEKALMLFIEMEAAAGLYSNATTMSSIVPAYVRCEGISRKEGIHGYVIKRG 349
Query: 363 LESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFY 422
LE+NR +Q +LI M+S+ G I +K +F+ + D+D+ W+ +I Y I G AL L +
Sbjct: 350 LETNRYLQNALIDMYSRMGDIKTSKRIFDSMEDRDIVSWNTIITSYVICGRSSDALLLLH 409
Query: 423 KMQHVE---------------GLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIE 467
+MQ +E KP+++ ++L C+ + G N +
Sbjct: 410 EMQRIEEKSTYDGDYNDEKQVPFKPNSITLMTVLPGCASLSALAKGKEIHAYAIRNL-LA 468
Query: 468 PSIEHYLCLVDLLGRAGRFDLALKTIHEMPV 498
+ LVD+ + G +LA + +MP+
Sbjct: 469 SQVTVGSALVDMYAKCGCLNLARRVFDQMPI 499
Score = 179 bits (453), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 132/497 (26%), Positives = 246/497 (49%), Gaps = 45/497 (9%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKV- 59
MI + + N F E L M+ GV + TF VL AC++++ + GK +H++ L+
Sbjct: 187 MISSFSQNERFMEALMFLRLMVLEGVKPDGVTFASVLPACSHLDLLRTGKEIHAYALRTD 246
Query: 60 GFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAIL 119
+++FV + L+DMY C S R V D V R + WN++I+ ++++ +++A++
Sbjct: 247 DVIENSFVGSALVDMYCNCGQVESGRLVFDS--VLDRKIGLWNAMIAGYAQSEHDEKALM 304
Query: 120 VLKEM-WVLGLELSASTFVSVVSGCSFRQGIS----MHCCVYKLGLLNNEIPLANSVMSM 174
+ EM GL +A+T S+V +GIS +H V K GL N L N+++ M
Sbjct: 305 LFIEMEAAAGLYSNATTMSSIVPAYVRCEGISRKEGIHGYVIKRGLETNRY-LQNALIDM 363
Query: 175 YAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMS-------- 226
Y++ G + ++ IFD + + IVSW TII YV G ++A L ++M+R+
Sbjct: 364 YSRMGDIKTSKRIFDSMEDRDIVSWNTIITSYVICGRSSDALLLLHEMQRIEEKSTYDGD 423
Query: 227 --------VTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTK 278
P+ + + ++ GCA + L +H+ +++ ++ + + LV MY K
Sbjct: 424 YNDEKQVPFKPNSITLMTVLPGCASLSALAKGKEIHAYAIRNLLASQVTVGSALVDMYAK 483
Query: 279 CGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKT-----SVRPNEA 333
CG L LARRVFD + ++V W +I Y G E++ LF+ ++ V+P E
Sbjct: 484 CGCLNLARRVFDQMPIRNVITWNVIIMAYGMHGKGKESLELFEDMVAEGAKGGEVKPTEV 543
Query: 334 TLATTLSACAELGSLSKGKEI-EEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFER 392
T ++C+ G + +G + + +G+E ++ + + G++ +A +
Sbjct: 544 TFIALFASCSHSGMVDEGLSLFHKMKNEHGIEPAPDHYACIVDLVGRAGKVEEAYGLVNT 603
Query: 393 VP---DKDLAVWSAMINGYAIHG---MGDQALNLFYKMQHVEGLKPDAVVYTSILSAC-S 445
+P DK + WS+++ I+ +G+ A ++Q PD + +LS S
Sbjct: 604 MPSGFDK-VGAWSSLLGACRIYHNIEIGEIAAENLLQLQ------PDVASHYVLLSNIYS 656
Query: 446 HSGMVDDGLSFFKSMQS 462
+G+ D ++ + M++
Sbjct: 657 SAGLWDKAMNLRRRMKA 673
>gi|255586014|ref|XP_002533676.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223526427|gb|EEF28706.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 726
Score = 346 bits (888), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 203/597 (34%), Positives = 329/597 (55%), Gaps = 18/597 (3%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINS-IWDGKRVHSHVLKV 59
++R + G E L Y M ++GV ++FTFP + +A ++ S + GK VH +K+
Sbjct: 99 IMRTHLDFGLVTEALLLYKKMRESGVKTDAFTFPTINRAVMSLKSDVLLGKMVHCDAMKL 158
Query: 60 GFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAIL 119
GF D + +I++Y++C R + DEM R +VSW S+IS + A
Sbjct: 159 GFGYDLYFCNTMIEVYARCGCVYYGRVMFDEMSPR--DLVSWTSMISGYVSEGNVFSAFE 216
Query: 120 VLKEMWVLGLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMY 175
+ +M L +E ++ T + ++ GC +F +G +HC + K GLL + NS++ MY
Sbjct: 217 LFNKM-RLEMEPNSVTLIVMLKGCYAYDNFSEGRQLHCYIIKNGLLIYG-SVQNSILRMY 274
Query: 176 AKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMR-RMSVTPDLVVF 234
+ G E S+F EI ++SW T+IG Y G+ E NQMR ++++ + +
Sbjct: 275 SITGSAKEVESLFVEIYRRDVISWNTLIGFYALRGDAEEMVCGFNQMRGEVALSSETLTL 334
Query: 235 LNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLE 294
+ + A++GNL +HS +K G ++ L +LL Y KCG+L + ++F +
Sbjct: 335 VISVF--AKIGNLVEGEKLHSFSIKVGLCDDVLLASLL-DFYAKCGELRNSVQLFGEIPC 391
Query: 295 KSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEI 354
+S W M+ G Q GY EA++LF+++ + V+ L + + AC+ LGSL KEI
Sbjct: 392 RSSSTWKLMMSGCIQNGYFDEAIHLFRQMQASGVQLQAQILGSLVDACSHLGSLQLCKEI 451
Query: 355 EEYIVLNGLE----SNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAI 410
Y+ N N + TS+++M+ +CG I+ A+E F R+ KD W++MI GY I
Sbjct: 452 HGYLTRNFFYILEGDNIHLGTSILNMYIRCGSISSAREYFNRMVAKDNITWTSMIEGYGI 511
Query: 411 HGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSI 470
HGM +AL LF +M VE + P+ V + S+LSACSHSG++ G F SM+ FG+EP +
Sbjct: 512 HGMAIEALKLFNQML-VERVLPNRVTFLSLLSACSHSGLIRQGCELFLSMKWVFGMEPDL 570
Query: 471 EHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLT 530
+HY C+VDLLGR G+ AL I M V +++W L+++C H + ++GE+AA+ LL
Sbjct: 571 DHYTCMVDLLGRCGKIKEALAMIIRMVVVADSRIWGALVASCRVHGDKKVGEFAAQRLLE 630
Query: 531 LNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVA 587
+ + G Y L++N+ G W E R ++ ++ L K PGWS + G F++
Sbjct: 631 MESDNVGYYTLLSNIQAMVGKWDEVEQVRKVIHEKDLRKTPGWSCIVGKGRNYCFIS 687
Score = 177 bits (449), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 122/416 (29%), Positives = 220/416 (52%), Gaps = 17/416 (4%)
Query: 40 CANINSIWDGKRVHSHVL-KVGFQQD-AFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRS 97
C ++ ++ K++H+ +L GF + +F T LI YSK +D S+ V + + +
Sbjct: 38 CKDLRTL---KQIHASLLVSTGFNESISFPSTKLISFYSKFNDLESAISVFSLL--QEPN 92
Query: 98 VVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGC-SFRQ----GISMH 152
+SWN I+ H L EA+L+ K+M G++ A TF ++ S + G +H
Sbjct: 93 TLSWNLIMRTHLDFGLVTEALLLYKKMRESGVKTDAFTFPTINRAVMSLKSDVLLGKMVH 152
Query: 153 CCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNV 212
C KLG ++ N+++ +YA+ G V R +FDE+ +VSWT++I GYV+ GNV
Sbjct: 153 CDAMKLG-FGYDLYFCNTMIEVYARCGCVYYGRVMFDEMSPRDLVSWTSMISGYVSEGNV 211
Query: 213 NEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLL 272
AF L N+M R+ + P+ V + ++ GC N +H ++K+G + N +
Sbjct: 212 FSAFELFNKM-RLEMEPNSVTLIVMLKGCYAYDNFSEGRQLHCYIIKNGLLIYGSVQNSI 270
Query: 273 VSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNE 332
+ MY+ G + +F + + V W ++IG YA G E V F + ++ V +
Sbjct: 271 LRMYSITGSAKEVESLFVEIYRRDVISWNTLIGFYALRGDAEEMVCGFNQ-MRGEVALSS 329
Query: 333 ATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFER 392
TL +S A++G+L +G+++ + + GL + + SL+ ++KCG + + ++F
Sbjct: 330 ETLTLVISVFAKIGNLVEGEKLHSFSIKVGL-CDDVLLASLLDFYAKCGELRNSVQLFGE 388
Query: 393 VPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSG 448
+P + + W M++G +G D+A++LF +MQ G++ A + S++ ACSH G
Sbjct: 389 IPCRSSSTWKLMMSGCIQNGYFDEAIHLFRQMQ-ASGVQLQAQILGSLVDACSHLG 443
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 89/356 (25%), Positives = 169/356 (47%), Gaps = 21/356 (5%)
Query: 168 ANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSV 227
+ ++S Y+KF + A S+F + E + +SW I+ +++ G V EA L +MR V
Sbjct: 65 STKLISFYSKFNDLESAISVFSLLQEPNTLSWNLIMRTHLDFGLVTEALLLYKKMRESGV 124
Query: 228 TPDLVVFLNLILGCAQV-GNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELAR 286
D F + + ++ L +H +K G+ + N ++ +Y +CG + R
Sbjct: 125 KTDAFTFPTINRAVMSLKSDVLLGKMVHCDAMKLGFGYDLYFCNTMIEVYARCGCVYYGR 184
Query: 287 RVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELG 346
+FD + + + WTSMI GY G A LF + ++ + PN TL L C
Sbjct: 185 VMFDEMSPRDLVSWTSMISGYVSEGNVFSAFELFNK-MRLEMEPNSVTLIVMLKGCYAYD 243
Query: 347 SLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMIN 406
+ S+G+++ YI+ NGL VQ S++ M+S G + + +F + +D+ W+ +I
Sbjct: 244 NFSEGRQLHCYIIKNGLLIYGSVQNSILRMYSITGSAKEVESLFVEIYRRDVISWNTLIG 303
Query: 407 GYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGI 466
YA+ G ++ + F +M+ L + + T ++S + G + +G + + S
Sbjct: 304 FYALRGDAEEMVCGFNQMRGEVALSSETL--TLVISVFAKIGNLVEG----EKLHS---- 353
Query: 467 EPSIEHYLC-------LVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKH 515
SI+ LC L+D + G +++ E+P + W ++S C+++
Sbjct: 354 -FSIKVGLCDDVLLASLLDFYAKCGELRNSVQLFGEIPCR-SSSTWKLMMSGCIQN 407
>gi|356546093|ref|XP_003541466.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g33680-like [Glycine max]
Length = 775
Score = 346 bits (887), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 198/600 (33%), Positives = 322/600 (53%), Gaps = 10/600 (1%)
Query: 29 NSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVL 88
N+ T V A + ++ G++ H+ +K D F + L++MY K +R +
Sbjct: 115 NAHTLTGVFTAASTLSDSRAGRQAHALAVKTACSHDVFAASSLLNMYCKTGLVFEARDLF 174
Query: 89 DEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMW--VLGLELSASTFVSVVSGCS-- 144
DEMP R + VSW ++IS ++ L DEA + K M G + F SV+S +
Sbjct: 175 DEMPER--NAVSWATMISGYASQELADEAFELFKLMRHEEKGKNENEFVFTSVLSALTCY 232
Query: 145 --FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTI 202
G +H K GL+ + +AN++++MY K G + +A F+ G + ++W+ +
Sbjct: 233 MLVNTGRQVHSLAMKNGLVCI-VSVANALVTMYVKCGSLEDALKTFELSGNKNSITWSAM 291
Query: 203 IGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGY 262
+ G+ G+ ++A L M + P + +I C+ + MH LK GY
Sbjct: 292 VTGFAQFGDSDKALKLFYDMHQSGELPSEFTLVGVINACSDACAIVEGRQMHGYSLKLGY 351
Query: 263 NNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKR 322
+ + + LV MY KCG + AR+ F+ + + V LWTS+I GY Q G A+NL+ +
Sbjct: 352 ELQLYVLSALVDMYAKCGSIVDARKGFECIQQPDVVLWTSIITGYVQNGDYEGALNLYGK 411
Query: 323 LLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGR 382
+ V PN+ T+A+ L AC+ L +L +GK++ I+ + ++L M++KCG
Sbjct: 412 MQLGGVIPNDLTMASVLKACSNLAALDQGKQMHAGIIKYNFSLEIPIGSALSAMYAKCGS 471
Query: 383 INKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILS 442
++ +F R+P +D+ W+AMI+G + +G G++ L LF KM +EG KPD V + ++LS
Sbjct: 472 LDDGYRIFWRMPARDVISWNAMISGLSQNGRGNEGLELFEKMC-LEGTKPDNVTFVNLLS 530
Query: 443 ACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQA 502
ACSH G+VD G +FK M F I P++EHY C+VD+L RAG+ A + I V+
Sbjct: 531 ACSHMGLVDRGWVYFKMMFDEFNIAPTVEHYACMVDILSRAGKLHEAKEFIESATVDHGL 590
Query: 503 QVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLM 562
+W LL+A H + +LG YA + L+ L + Y+L+++++T+ G W++ RG+M
Sbjct: 591 CLWRILLAASKNHRDYDLGAYAGEKLMELGSLESSAYVLLSSIYTALGKWEDVERVRGMM 650
Query: 563 DDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKELHIKLLEAGYIAEADIVP 622
R +TKEPG S +E+ VFV GD H +IR LK L + + GY D +P
Sbjct: 651 KARGVTKEPGCSWIELKSLTHVFVVGDNMHPQIDEIRLGLKLLTKLMKDEGYQPLLDSLP 710
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 145/479 (30%), Positives = 245/479 (51%), Gaps = 25/479 (5%)
Query: 36 VLKA---CANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMP 92
VL+A C + G+ +H+ +L G + LI++Y+KCS F + V D
Sbjct: 13 VLRALVHCTRHKQLRKGRALHARILVTGSFSSTQIANSLINLYAKCSHFSKANLVFDS-- 70
Query: 93 VRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLE-----LSASTFVSVVSGCSF-- 145
+ + VVSWN +I+A S+ + ++ V+ L + +A T V + S
Sbjct: 71 INNKDVVSWNCLINAFSQQQAHAPSLHVMHLFRQLVMAHKTIVPNAHTLTGVFTAASTLS 130
Query: 146 --RQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTII 203
R G H K ++++ A+S+++MY K G V EAR +FDE+ E + VSW T+I
Sbjct: 131 DSRAGRQAHALAVKTA-CSHDVFAASSLLNMYCKTGLVFEARDLFDEMPERNAVSWATMI 189
Query: 204 GGYVNVGNVNEAFGLCNQMR--RMSVTPDLVVFLNLI--LGCAQVGNLFLALSMHSLLLK 259
GY + +EAF L MR + VF +++ L C + N +HSL +K
Sbjct: 190 SGYASQELADEAFELFKLMRHEEKGKNENEFVFTSVLSALTCYMLVN--TGRQVHSLAMK 247
Query: 260 SGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNL 319
+G + N LV+MY KCG LE A + F+ K+ W++M+ G+AQ G +A+ L
Sbjct: 248 NGLVCIVSVANALVTMYVKCGSLEDALKTFELSGNKNSITWSAMVTGFAQFGDSDKALKL 307
Query: 320 FKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSK 379
F + ++ P+E TL ++AC++ ++ +G+++ Y + G E V ++L+ M++K
Sbjct: 308 FYDMHQSGELPSEFTLVGVINACSDACAIVEGRQMHGYSLKLGYELQLYVLSALVDMYAK 367
Query: 380 CGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTS 439
CG I A++ FE + D+ +W+++I GY +G + ALNL+ KMQ + G+ P+ + S
Sbjct: 368 CGSIVDARKGFECIQQPDVVLWTSIITGYVQNGDYEGALNLYGKMQ-LGGVIPNDLTMAS 426
Query: 440 ILSACSHSGMVDDGLSFFKS-MQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMP 497
+L ACS+ +D G ++ NF +E I L + + G D + MP
Sbjct: 427 VLKACSNLAALDQGKQMHAGIIKYNFSLEIPIGS--ALSAMYAKCGSLDDGYRIFWRMP 483
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 115/432 (26%), Positives = 212/432 (49%), Gaps = 18/432 (4%)
Query: 23 QTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFV 82
+ G + N F F VL A + G++VHS +K G V L+ MY KC
Sbjct: 212 EKGKNENEFVFTSVLSALTCYMLVNTGRQVHSLAMKNGLVCIVSVANALVTMYVKCGSLE 271
Query: 83 SSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSG 142
+ K E+ ++ ++W+++++ ++ +D+A+ + +M G S T V V++
Sbjct: 272 DALKTF-ELSGN-KNSITWSAMVTGFAQFGDSDKALKLFYDMHQSGELPSEFTLVGVINA 329
Query: 143 CS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVS 198
CS +G MH KLG ++ + ++++ MYAK G + +AR F+ I + +V
Sbjct: 330 CSDACAIVEGRQMHGYSLKLG-YELQLYVLSALVDMYAKCGSIVDARKGFECIQQPDVVL 388
Query: 199 WTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLL 258
WT+II GYV G+ A L +M+ V P+ + +++ C+ + L MH+ ++
Sbjct: 389 WTSIITGYVQNGDYEGALNLYGKMQLGGVIPNDLTMASVLKACSNLAALDQGKQMHAGII 448
Query: 259 KSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVN 318
K ++ E P+ + L +MY KCG L+ R+F + + V W +MI G +Q G +E +
Sbjct: 449 KYNFSLEIPIGSALSAMYAKCGSLDDGYRIFWRMPARDVISWNAMISGLSQNGRGNEGLE 508
Query: 319 LFKRLLKTSVRPNEATLATTLSACAELGSLSKG-----KEIEEYIVLNGLESNRQVQTSL 373
LF+++ +P+ T LSAC+ +G + +G +E+ + +E +
Sbjct: 509 LFEKMCLEGTKPDNVTFVNLLSACSHMGLVDRGWVYFKMMFDEFNIAPTVEH----YACM 564
Query: 374 IHMFSKCGRINKAKEVFERVP-DKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKP 432
+ + S+ G++++AKE E D L +W ++ H D K+ + L+
Sbjct: 565 VDILSRAGKLHEAKEFIESATVDHGLCLWRILLAASKNHRDYDLGAYAGEKLMELGSLES 624
Query: 433 DA-VVYTSILSA 443
A V+ +SI +A
Sbjct: 625 SAYVLLSSIYTA 636
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 96/382 (25%), Positives = 176/382 (46%), Gaps = 11/382 (2%)
Query: 145 FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIG 204
R+G ++H + G ++ +ANS++++YAK ++A +FD I +VSW +I
Sbjct: 26 LRKGRALHARILVTGSFSS-TQIANSLINLYAKCSHFSKANLVFDSINNKDVVSWNCLIN 84
Query: 205 GYVNVGNVNEAFGLCNQMRRM-----SVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLK 259
+ + + + R++ ++ P+ + + + + H+L +K
Sbjct: 85 AFSQQQAHAPSLHVMHLFRQLVMAHKTIVPNAHTLTGVFTAASTLSDSRAGRQAHALAVK 144
Query: 260 SGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNL 319
+ +++ + L++MY K G + AR +FD + E++ W +MI GYA EA L
Sbjct: 145 TACSHDVFAASSLLNMYCKTGLVFEARDLFDEMPERNAVSWATMISGYASQELADEAFEL 204
Query: 320 FK--RLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMF 377
FK R + NE + LSA ++ G+++ + NGL V +L+ M+
Sbjct: 205 FKLMRHEEKGKNENEFVFTSVLSALTCYMLVNTGRQVHSLAMKNGLVCIVSVANALVTMY 264
Query: 378 SKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVY 437
KCG + A + FE +K+ WSAM+ G+A G D+AL LFY M H G P
Sbjct: 265 VKCGSLEDALKTFELSGNKNSITWSAMVTGFAQFGDSDKALKLFYDM-HQSGELPSEFTL 323
Query: 438 TSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMP 497
+++ACS + + +G G E + LVD+ + G A K E
Sbjct: 324 VGVINACSDACAIVEGRQ-MHGYSLKLGYELQLYVLSALVDMYAKCGSIVDARKGF-ECI 381
Query: 498 VEVQAQVWAPLLSACMKHHNVE 519
+ +W +++ +++ + E
Sbjct: 382 QQPDVVLWTSIITGYVQNGDYE 403
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 73/249 (29%), Positives = 129/249 (51%), Gaps = 7/249 (2%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
M+ G ++ L + M Q+G + FT V+ AC++ +I +G+++H + LK+G
Sbjct: 291 MVTGFAQFGDSDKALKLFYDMHQSGELPSEFTLVGVINACSDACAIVEGRQMHGYSLKLG 350
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
++ +V + L+DMY+KC V +RK + ++ VV W SII+ + + + A+ +
Sbjct: 351 YELQLYVLSALVDMYAKCGSIVDARKGFE--CIQQPDVVLWTSIITGYVQNGDYEGALNL 408
Query: 121 LKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
+M + G+ + T SV+ CS QG MH + K + EIP+ +++ +MYA
Sbjct: 409 YGKMQLGGVIPNDLTMASVLKACSNLAALDQGKQMHAGIIKYN-FSLEIPIGSALSAMYA 467
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K G +++ IF + ++SW +I G G NE L +M PD V F+N
Sbjct: 468 KCGSLDDGYRIFWRMPARDVISWNAMISGLSQNGRGNEGLELFEKMCLEGTKPDNVTFVN 527
Query: 237 LILGCAQVG 245
L+ C+ +G
Sbjct: 528 LLSACSHMG 536
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 140/283 (49%), Gaps = 8/283 (2%)
Query: 235 LNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLE 294
L ++ C + L ++H+ +L +G + + N L+++Y KC A VFD++
Sbjct: 14 LRALVHCTRHKQLRKGRALHARILVTGSFSSTQIANSLINLYAKCSHFSKANLVFDSINN 73
Query: 295 KSVFLWTSMIGGYAQ--LGYPS-EAVNLFKRLL--KTSVRPNEATLATTLSACAELGSLS 349
K V W +I ++Q PS ++LF++L+ ++ PN TL +A + L
Sbjct: 74 KDVVSWNCLINAFSQQQAHAPSLHVMHLFRQLVMAHKTIVPNAHTLTGVFTAASTLSDSR 133
Query: 350 KGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYA 409
G++ V + +SL++M+ K G + +A+++F+ +P+++ W+ MI+GYA
Sbjct: 134 AGRQAHALAVKTACSHDVFAASSLLNMYCKTGLVFEARDLFDEMPERNAVSWATMISGYA 193
Query: 410 IHGMGDQALNLFYKMQHVE-GLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEP 468
+ D+A LF M+H E G + V+TS+LSA + +V+ G N G+
Sbjct: 194 SQELADEAFELFKLMRHEEKGKNENEFVFTSVLSALTCYMLVNTGRQVHSLAMKN-GLVC 252
Query: 469 SIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSA 511
+ LV + + G + ALKT E+ + W+ +++
Sbjct: 253 IVSVANALVTMYVKCGSLEDALKTF-ELSGNKNSITWSAMVTG 294
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 102/195 (52%), Gaps = 10/195 (5%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+I NG +E L+ Y M GV N T VLKAC+N+ ++ GK++H+ ++K
Sbjct: 392 IITGYVQNGDYEGALNLYGKMQLGGVIPNDLTMASVLKACSNLAALDQGKQMHAGIIKYN 451
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F + + + L MY+KC ++ MP R V+SWN++IS S+ +E + +
Sbjct: 452 FSLEIPIGSALSAMYAKCGSLDDGYRIFWRMPA--RDVISWNAMISGLSQNGRGNEGLEL 509
Query: 121 LKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGLLNNEIPLANSV------MSM 174
++M + G + TFV+++S CS G+ VY ++ +E +A +V + +
Sbjct: 510 FEKMCLEGTKPDNVTFVNLLSACS-HMGLVDRGWVY-FKMMFDEFNIAPTVEHYACMVDI 567
Query: 175 YAKFGKVNEARSIFD 189
++ GK++EA+ +
Sbjct: 568 LSRAGKLHEAKEFIE 582
>gi|15229764|ref|NP_187753.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169981|sp|Q9CAY1.1|PP223_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g11460
gi|12322902|gb|AAG51440.1|AC008153_13 hypothetical protein; 50785-52656 [Arabidopsis thaliana]
gi|332641528|gb|AEE75049.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 623
Score = 346 bits (887), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 188/521 (36%), Positives = 293/521 (56%), Gaps = 16/521 (3%)
Query: 101 WNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCSFRQ----GISMHCCVY 156
WN + + L E+I + + M G A +F ++ C+ G +HC V
Sbjct: 21 WNVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVT 80
Query: 157 KLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVS--WTTIIGGYVNVGNVNE 214
K G E + +++SMY K G V +AR +F+E ++S +S + +I GY V +
Sbjct: 81 KGGC-ETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTD 139
Query: 215 AFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVS 274
A + +M+ V+ D V L L+ C L+L S+H +K G ++E + N ++
Sbjct: 140 AAYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFIT 199
Query: 275 MYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEAT 334
MY KCG +E RR+FD + K + W ++I GY+Q G + + L++++ + V P+ T
Sbjct: 200 MYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFT 259
Query: 335 LATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVP 394
L + LS+CA LG+ G E+ + + NG N V + I M+++CG + KA+ VF+ +P
Sbjct: 260 LVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVFDIMP 319
Query: 395 DKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGL 454
K L W+AMI Y +HGMG+ L LF M G++PD V+ +LSACSHSG+ D GL
Sbjct: 320 VKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIK-RGIRPDGAVFVMVLSACSHSGLTDKGL 378
Query: 455 SFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMK 514
F++M+ + +EP EHY CLVDLLGRAGR D A++ I MPVE VW LL AC
Sbjct: 379 ELFRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIESMPVEPDGAVWGALLGACKI 438
Query: 515 HHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSA----GMWKEAATARGLMDDRRLTKE 570
H NV++ E A ++ P + G Y+LM+N+++ + G+W+ R +M +R K+
Sbjct: 439 HKNVDMAELAFAKVIEFEPNNIGYYVLMSNIYSDSKNQEGIWR----IRVMMRERAFRKK 494
Query: 571 PGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKELHIKLLE 611
PG+S VE G V +F+AGDRSH + ++ + L EL ++E
Sbjct: 495 PGYSYVEHKGRVHLFLAGDRSHEQTEEVHRMLDELETSVME 535
Score = 231 bits (589), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 154/503 (30%), Positives = 252/503 (50%), Gaps = 25/503 (4%)
Query: 11 FEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTG 70
F E++S Y SML++G ++F+FP +LK+CA+++ G+++H HV K G + + FV T
Sbjct: 34 FSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVTKGGCETEPFVLTA 93
Query: 71 LIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLE 130
LI MY KC +RKV +E P + V +N++IS ++ +A + + M G+
Sbjct: 94 LISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTDAAYMFRRMKETGVS 153
Query: 131 LSASTFVSVVSGCSFRQ----GISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARS 186
+ + T + +V C+ + G S+H K G L++E+ + NS ++MY K G V R
Sbjct: 154 VDSVTMLGLVPLCTVPEYLWLGRSLHGQCVK-GGLDSEVAVLNSFITMYMKCGSVEAGRR 212
Query: 187 IFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGN 246
+FDE+ +++W +I GY G + L QM+ V PD ++++ CA +G
Sbjct: 213 LFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFTLVSVLSSCAHLGA 272
Query: 247 LFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGG 306
+ + L+ +G+ + N +SMY +CG+L AR VFD + KS+ WT+MIG
Sbjct: 273 KKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVFDIMPVKSLVSWTAMIGC 332
Query: 307 YAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEI-----EEYIVLN 361
Y G + LF ++K +RP+ A LSAC+ G KG E+ EY
Sbjct: 333 YGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLELFRAMKREY---- 388
Query: 362 GLESNRQVQTSLIHMFSKCGRINKAKEVFERVP-DKDLAVWSAMINGYAIHGMGDQALNL 420
LE + + L+ + + GR+++A E E +P + D AVW A++ IH D A
Sbjct: 389 KLEPGPEHYSCLVDLLGRAGRLDEAMEFIESMPVEPDGAVWGALLGACKIHKNVDMAELA 448
Query: 421 FYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSM--QSNFGIEPSIEHYLCLVD 478
F K+ E P+ + Y ++S +G+ + M + F +P + V+
Sbjct: 449 FAKVIEFE---PNNIGYYVLMSNIYSDSKNQEGIWRIRVMMRERAFRKKPGYSY----VE 501
Query: 479 LLGRAGRFDLALKTIHEMPVEVQ 501
GR F LA HE EV
Sbjct: 502 HKGRVHLF-LAGDRSHEQTEEVH 523
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 85/312 (27%), Positives = 152/312 (48%), Gaps = 9/312 (2%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+I T N + + M +TGV +S T ++ C +W G+ +H +K G
Sbjct: 127 LISGYTANSKVTDAAYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGG 186
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+ V I MY KC + R++ DEMPV + +++WN++IS +S+ L + + +
Sbjct: 187 LDSEVAVLNSFITMYMKCGSVEAGRRLFDEMPV--KGLITWNAVISGYSQNGLAYDVLEL 244
Query: 121 LKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGLLNNEIP---LANSVMSMYAK 177
++M G+ T VSV+S C+ + V KL N +P ++N+ +SMYA+
Sbjct: 245 YEQMKSSGVCPDPFTLVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYAR 304
Query: 178 FGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNL 237
G + +AR++FD + S+VSWT +IG Y G L + M + + PD VF+ +
Sbjct: 305 CGNLAKARAVFDIMPVKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMV 364
Query: 238 ILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNL--LVSMYTKCGDLELARRVFDAV-LE 294
+ C+ G L + +K Y E ++ LV + + G L+ A +++ +E
Sbjct: 365 LSACSHSGLTDKGLELFR-AMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIESMPVE 423
Query: 295 KSVFLWTSMIGG 306
+W +++G
Sbjct: 424 PDGAVWGALLGA 435
>gi|359480813|ref|XP_002277337.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g39350-like [Vitis vinifera]
Length = 634
Score = 346 bits (887), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 197/575 (34%), Positives = 305/575 (53%), Gaps = 44/575 (7%)
Query: 6 TNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDA 65
+ NG +E + TYS M GV + + FP V +AC + + G +VH V+ G + D
Sbjct: 100 SRNGLSDECVRTYSEMKLKGVLPDKYVFPKVFRACGQLLWLEVGIQVHKDVVICGCEFDL 159
Query: 66 FVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMW 125
V LIDMYSK D S R+V DEM R V+SWNS+IS + + ++ +L M
Sbjct: 160 QVCNSLIDMYSKSGDVGSGRRVFDEMVER--DVLSWNSMISGYVCNGFLEFSVELLASMR 217
Query: 126 VLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEAR 185
+ G E T+ N+VM Y + G +EA
Sbjct: 218 IRGFEPDMVTW--------------------------------NTVMDAYCRMGLCDEAW 245
Query: 186 SIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQM--RRMSVTPDLVVFLNLILGCAQ 243
IF++I E +I+S TT++ GY +GN ++ G+ +M RR++ PDL ++++ C
Sbjct: 246 EIFEQIKEPNIISLTTLVSGYSRIGNHEKSLGIFREMMSRRVAF-PDLDSLSSVLVSCRH 304
Query: 244 VGNLFLALSMHSLLLKSGYNNE--DPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWT 301
+G L +H ++S ++ L++MY KC ++ A VF+ + V W
Sbjct: 305 LGALVCGQEIHGYGIRSVDSSSFYKSAGAALLTMYVKCKRIQDALNVFELMDRFDVVTWN 364
Query: 302 SMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLN 361
+MI G+ L A+ F ++ ++ + N+ T++T L AC L GK++ YI N
Sbjct: 365 AMILGFVDLEMGHLALECFSKMQRSGIMNNQITISTVLPAC----DLKSGKQVHAYITKN 420
Query: 362 GLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLF 421
S V +LIHM+SKCG I A +F + +DL W+ MI G+ +HG+G AL L
Sbjct: 421 SFSSVIPVWNALIHMYSKCGCIGTAYSIFSNMISRDLVSWNTMIGGFGMHGLGQFALQLL 480
Query: 422 YKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLG 481
M H + + P++V +TS LSACSHSG+VD+G+ F +M +FG P +EH+ C+VDLL
Sbjct: 481 RDMSHSD-VCPNSVTFTSALSACSHSGLVDEGMELFHTMTRDFGFTPGMEHFSCVVDLLA 539
Query: 482 RAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYIL 541
RA R + A+ I +MP++ +W+ LL+AC NV + + AA+ L L P GNY+
Sbjct: 540 RADRLEDAVGFIEKMPLKPSKHIWSALLAACRAQQNVSVAKLAAEQLFQLEPEHAGNYVT 599
Query: 542 MANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQV 576
++N++ AG W +A R LM+DR L K G+S +
Sbjct: 600 LSNIYARAGRWDDAVAVRKLMEDRGLVKPSGYSWI 634
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 73/261 (27%), Positives = 133/261 (50%), Gaps = 6/261 (2%)
Query: 236 NLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEK 295
+L+ C+ L +H ++ G ++ + LV MY CGDL A+ +FD + +
Sbjct: 28 HLLQLCSNSKALHQGKQLHQHIILCGLDHHPFMLTKLVQMYADCGDLGSAQALFDKLSQP 87
Query: 296 SVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIE 355
+VF WT+++G Y++ G E V + + V P++ AC +L L G ++
Sbjct: 88 NVFAWTAILGFYSRNGLSDECVRTYSEMKLKGVLPDKYVFPKVFRACGQLLWLEVGIQVH 147
Query: 356 EYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGD 415
+ +V+ G E + QV SLI M+SK G + + VF+ + ++D+ W++MI+GY +G +
Sbjct: 148 KDVVICGCEFDLQVCNSLIDMYSKSGDVGSGRRVFDEMVERDVLSWNSMISGYVCNGFLE 207
Query: 416 QALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLC 475
++ L M+ + G +PD V + +++ A G+ D+ F+ ++ EP+I
Sbjct: 208 FSVELLASMR-IRGFEPDMVTWNTVMDAYCRMGLCDEAWEIFEQIK-----EPNIISLTT 261
Query: 476 LVDLLGRAGRFDLALKTIHEM 496
LV R G + +L EM
Sbjct: 262 LVSGYSRIGNHEKSLGIFREM 282
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 76/305 (24%), Positives = 141/305 (46%), Gaps = 36/305 (11%)
Query: 144 SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTII 203
+ QG +H + GL ++ L ++ MYA G + A+++FD++ + ++ +WT I+
Sbjct: 38 ALHQGKQLHQHIILCGLDHHPFMLTK-LVQMYADCGDLGSAQALFDKLSQPNVFAWTAIL 96
Query: 204 GGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYN 263
G Y G +E ++M+ V PD VF + C Q+ L + + +H ++ G
Sbjct: 97 GFYSRNGLSDECVRTYSEMKLKGVLPDKYVFPKVFRACGQLLWLEVGIQVHKDVVICGCE 156
Query: 264 NEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRL 323
+ + N L+ MY+K GD+ RRVFD ++E+ V W SMI GY G+ +V L +
Sbjct: 157 FDLQVCNSLIDMYSKSGDVGSGRRVFDEMVERDVLSWNSMISGYVCNGFLEFSVELLASM 216
Query: 324 LKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRI 383
P+ T T + A + + G
Sbjct: 217 RIRGFEPDMVTWNTVMDA-----------------------------------YCRMGLC 241
Query: 384 NKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSA 443
++A E+FE++ + ++ + +++GY+ G +++L +F +M PD +S+L +
Sbjct: 242 DEAWEIFEQIKEPNIISLTTLVSGYSRIGNHEKSLGIFREMMSRRVAFPDLDSLSSVLVS 301
Query: 444 CSHSG 448
C H G
Sbjct: 302 CRHLG 306
>gi|297833028|ref|XP_002884396.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330236|gb|EFH60655.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 882
Score = 346 bits (887), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 199/621 (32%), Positives = 336/621 (54%), Gaps = 7/621 (1%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+I +++G +EE L Y + + + +SFT VL A AN+ + G+ +H LK G
Sbjct: 178 LISGYSSHGYYEEALEIYHELRNSWIVPDSFTVSSVLPAFANLLVVKQGQGLHGFTLKSG 237
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+ V GL+ MY K S +R+V DEM VR V++N++I + + + +E++ +
Sbjct: 238 VNSVSVVNNGLLAMYLKFSRPTDARRVFDEMVVR--DSVTYNTMICGYLKLEMVEESVKM 295
Query: 121 LKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGLLNN---EIPLANSVMSMYAK 177
E + + T SV+ C + +S+ +Y L E + N ++ +YAK
Sbjct: 296 FLEN-LDQFKPDILTVTSVLCACGHLRDLSLAKYIYNYMLRAGFVLESTVKNILIDVYAK 354
Query: 178 FGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNL 237
G + AR +F+ + VSW +II GY+ G++ EA L M M D + +L L
Sbjct: 355 CGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLML 414
Query: 238 ILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSV 297
I ++ +L +HS +KSG + + N L+ MY KCG++ + ++F+++
Sbjct: 415 ISLSTRLADLKFGKGLHSNGIKSGIYIDLSVSNALIDMYAKCGEVGDSLKIFNSMGTLDT 474
Query: 298 FLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEY 357
W ++I + G + + + ++ K V P+ AT TL CA L + GKEI
Sbjct: 475 VTWNTVISACVRFGDFATGLQVTTQMRKNKVVPDMATFLVTLPMCASLAAKRLGKEIHCC 534
Query: 358 IVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQA 417
++ G ES Q+ +LI M+SKCG + + VFER+ +D+ W+ MI Y ++G G++A
Sbjct: 535 LLRFGYESELQIGNALIEMYSKCGCLESSFRVFERMSRRDVVTWTGMIYAYGMYGEGEKA 594
Query: 418 LNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLV 477
L F M+ G+ PD+VV+ +++ ACSHSG+V+ GL+ F+ M++++ I+P IEHY C+V
Sbjct: 595 LESFVDMEK-SGIVPDSVVFIALIYACSHSGLVEKGLACFEKMKTHYKIDPMIEHYACVV 653
Query: 478 DLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTG 537
DLL R+ + A + I MP+E A +WA +L AC ++E E ++ ++ LNP G
Sbjct: 654 DLLSRSQKISKAEEFIQAMPIEPDASIWASVLRACRTSGDMETAERVSRRIIELNPDDPG 713
Query: 538 NYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVD 597
IL +N + + W + + R + D+ + K PG+S +EI V VF +GD S S
Sbjct: 714 YSILASNAYAALRKWDKVSLIRKSVRDKHIKKNPGYSWIEIGKKVHVFCSGDDSAPQSEA 773
Query: 598 IRKTLKELHIKLLEAGYIAEA 618
I K+L+ L+ + + GYI ++
Sbjct: 774 IHKSLEILYSLMAKEGYIPDS 794
Score = 216 bits (551), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 138/504 (27%), Positives = 253/504 (50%), Gaps = 18/504 (3%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+IR + NG F + L Y + ++ V + +TFP V+KACA + G V+ +L++G
Sbjct: 77 IIRAFSKNGWFPKALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYKQILEMG 136
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F+ D +V L+DMYS+ +R+V DEMPV R +VSWNS+IS +S +EA+ +
Sbjct: 137 FESDLYVGNALVDMYSRMGLLSRARQVFDEMPV--RDLVSWNSLISGYSSHGYYEEALEI 194
Query: 121 LKEM---WVLGLELSASTFVSVVSG-CSFRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
E+ W++ + S+ + + +QG +H K G +N+ + N +++MY
Sbjct: 195 YHELRNSWIVPDSFTVSSVLPAFANLLVVKQGQGLHGFTLKSG-VNSVSVVNNGLLAMYL 253
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGL----CNQMRRMSVTPDLV 232
KF + +AR +FDE+ V++ T+I GY+ + V E+ + +Q + PD++
Sbjct: 254 KFSRPTDARRVFDEMVVRDSVTYNTMICGYLKLEMVEESVKMFLENLDQFK-----PDIL 308
Query: 233 VFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAV 292
+++ C + +L LA +++ +L++G+ E + N+L+ +Y KCGD+ AR VF+++
Sbjct: 309 TVTSVLCACGHLRDLSLAKYIYNYMLRAGFVLESTVKNILIDVYAKCGDMITARDVFNSM 368
Query: 293 LEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGK 352
K W S+I GY Q G EA+ LFK ++ + + T +S L L GK
Sbjct: 369 ECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISLSTRLADLKFGK 428
Query: 353 EIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHG 412
+ + +G+ + V +LI M++KCG + + ++F + D W+ +I+ G
Sbjct: 429 GLHSNGIKSGIYIDLSVSNALIDMYAKCGEVGDSLKIFNSMGTLDTVTWNTVISACVRFG 488
Query: 413 MGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEH 472
L + +M+ + PD + L C+ G + FG E ++
Sbjct: 489 DFATGLQVTTQMRK-NKVVPDMATFLVTLPMCASLAAKRLGKEIHCCLL-RFGYESELQI 546
Query: 473 YLCLVDLLGRAGRFDLALKTIHEM 496
L+++ + G + + + M
Sbjct: 547 GNALIEMYSKCGCLESSFRVFERM 570
Score = 182 bits (461), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 140/492 (28%), Positives = 241/492 (48%), Gaps = 19/492 (3%)
Query: 37 LKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLR 96
L + +N+N + +R+H+ V+ +G F LID YS SS V + +
Sbjct: 14 LSSSSNLNEL---RRIHALVISLGLDGSDFFSGKLIDKYSHFRAPASSLSVFRRVS-PAK 69
Query: 97 SVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVY 156
+V WNSII A S+ +A+ ++ + TF SV+ C+ M VY
Sbjct: 70 NVYIWNSIIRAFSKNGWFPKALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVY 129
Query: 157 KLGL---LNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVN 213
K L +++ + N+++ MY++ G ++ AR +FDE+ +VSW ++I GY + G
Sbjct: 130 KQILEMGFESDLYVGNALVDMYSRMGLLSRARQVFDEMPVRDLVSWNSLISGYSSHGYYE 189
Query: 214 EAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLV 273
EA + +++R + PD +++ A + + +H LKSG N+ ++N L+
Sbjct: 190 EALEIYHELRNSWIVPDSFTVSSVLPAFANLLVVKQGQGLHGFTLKSGVNSVSVVNNGLL 249
Query: 274 SMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEA 333
+MY K ARRVFD ++ + + +MI GY +L E+V +F L +P+
Sbjct: 250 AMYLKFSRPTDARRVFDEMVVRDSVTYNTMICGYLKLEMVEESVKMFLENLD-QFKPDIL 308
Query: 334 TLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERV 393
T+ + L AC L LS K I Y++ G V+ LI +++KCG + A++VF +
Sbjct: 309 TVTSVLCACGHLRDLSLAKYIYNYMLRAGFVLESTVKNILIDVYAKCGDMITARDVFNSM 368
Query: 394 PDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDG 453
KD W+++I+GY G +A+ LF KM + + D + Y ++S + + D
Sbjct: 369 ECKDTVSWNSIISGYIQSGDLMEAMKLF-KMMMIMEEQADHITYLMLISLSTR--LAD-- 423
Query: 454 LSFFKSMQSNFGIEPSIEHYL----CLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLL 509
L F K + SN GI+ I L L+D+ + G +LK + M + W ++
Sbjct: 424 LKFGKGLHSN-GIKSGIYIDLSVSNALIDMYAKCGEVGDSLKIFNSMGT-LDTVTWNTVI 481
Query: 510 SACMKHHNVELG 521
SAC++ + G
Sbjct: 482 SACVRFGDFATG 493
>gi|255559863|ref|XP_002520950.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223539787|gb|EEF41367.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 835
Score = 346 bits (887), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 197/627 (31%), Positives = 334/627 (53%), Gaps = 12/627 (1%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+I + NG E L +S ML+ GV N++TF L+AC + + I G ++H+ +LK G
Sbjct: 131 IISAYSGNGMCTEALCLFSEMLKAGVVTNTYTFAAALQACEDSSFIKLGMQIHAAILKSG 190
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
D +V L+ MY + + + + + +V+WNS+++ + L EA+
Sbjct: 191 RVLDVYVANALVAMYVRFGKMPEAAVIFGNLEGK--DIVTWNSMLTGFIQNGLYSEALEF 248
Query: 121 LKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
++ L+ + +S++ G +H K G +N I + N+++ MYA
Sbjct: 249 FYDLQNADLKPDQVSIISIIVASGRLGYLLNGKEIHAYAIKNGFDSN-ILVGNTLIDMYA 307
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K ++ FD + ++SWTT GY +A L Q++ + D + +
Sbjct: 308 KCCCMSYGGRAFDLMAHKDLISWTTAAAGYAQNKCYLQALELLRQLQMEGMDVDATMIGS 367
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDP-LDNLLVSMYTKCGDLELARRVFDAVLEK 295
++L C + L +H ++ G + DP L N ++ +Y +CG ++ A R+F+++ K
Sbjct: 368 ILLACRGLNCLGKIKEIHGYTIRGGLS--DPVLQNTIIDVYGECGIIDYAVRIFESIECK 425
Query: 296 SVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIE 355
V WTSMI Y G ++A+ +F + +T + P+ TL + LSA L +L KGKEI
Sbjct: 426 DVVSWTSMISCYVHNGLANKALEVFSSMKETGLEPDYVTLVSILSAVCSLSTLKKGKEIH 485
Query: 356 EYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGD 415
+I+ G + +L+ M+++CG + A ++F +++L +W+AMI+ Y +HG G+
Sbjct: 486 GFIIRKGFILEGSISNTLVDMYARCGSVEDAYKIFTCTKNRNLILWTAMISAYGMHGYGE 545
Query: 416 QALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLC 475
A+ LF +M+ E + PD + + ++L ACSHSG+V++G SF + M+ + +EP EHY C
Sbjct: 546 AAVELFMRMKD-EKIIPDHITFLALLYACSHSGLVNEGKSFLEIMKCEYQLEPWPEHYTC 604
Query: 476 LVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGS 535
LVDLLGR + A + + M E +VW LL AC H N E+GE AA+ LL L+ +
Sbjct: 605 LVDLLGRRNCLEEAYQIVKSMQNEPTPEVWCALLGACRIHSNKEIGEVAAEKLLELDLDN 664
Query: 536 TGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLS 595
GNY+L++N+F + G WK+ R M LTK PG S +E+ + F++ D+ H
Sbjct: 665 PGNYVLVSNVFAANGRWKDVEEVRMRMKGSGLTKNPGCSWIEVGNKIHAFLSRDKLHPEC 724
Query: 596 VDIRKTLKELHIKL-LEAGYIAEADIV 621
I + L ++ KL E GY+A+ V
Sbjct: 725 DKIYQKLAQVTEKLKREGGYVAQTKFV 751
Score = 259 bits (662), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 163/520 (31%), Positives = 272/520 (52%), Gaps = 12/520 (2%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
M+ +NG L Y M GV +S+TFP++LKAC + ++ G +H +K G
Sbjct: 29 MMGGYVSNGEALGALEMYREMRHLGVSFDSYTFPVLLKACGIVEDLFCGAEIHGLAIKYG 88
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
FV L+ +Y+KC+D +RK+ D M VR VVSWNSIISA+S + EA+ +
Sbjct: 89 CDSFVFVVNSLVALYAKCNDINGARKLFDRMYVR-NDVVSWNSIISAYSGNGMCTEALCL 147
Query: 121 LKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
EM G+ + TF + + C + G+ +H + K G + ++ +AN++++MY
Sbjct: 148 FSEMLKAGVVTNTYTFAAALQACEDSSFIKLGMQIHAAILKSGRV-LDVYVANALVAMYV 206
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
+FGK+ EA IF + IV+W +++ G++ G +EA ++ + PD V ++
Sbjct: 207 RFGKMPEAAVIFGNLEGKDIVTWNSMLTGFIQNGLYSEALEFFYDLQNADLKPDQVSIIS 266
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
+I+ ++G L +H+ +K+G+++ + N L+ MY KC + R FD + K
Sbjct: 267 IIVASGRLGYLLNGKEIHAYAIKNGFDSNILVGNTLIDMYAKCCCMSYGGRAFDLMAHKD 326
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEE 356
+ WT+ GYAQ +A+ L ++L + + + + L AC L L K KEI
Sbjct: 327 LISWTTAAAGYAQNKCYLQALELLRQLQMEGMDVDATMIGSILLACRGLNCLGKIKEIHG 386
Query: 357 YIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQ 416
Y + GL S+ +Q ++I ++ +CG I+ A +FE + KD+ W++MI+ Y +G+ ++
Sbjct: 387 YTIRGGL-SDPVLQNTIIDVYGECGIIDYAVRIFESIECKDVVSWTSMISCYVHNGLANK 445
Query: 417 ALNLFYKMQHVEGLKPDAVVYTSILSA-CSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLC 475
AL +F M+ GL+PD V SILSA CS S + ++ F +E SI +
Sbjct: 446 ALEVFSSMKET-GLEPDYVTLVSILSAVCSLSTLKKGKEIHGFIIRKGFILEGSISN--T 502
Query: 476 LVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKH 515
LVD+ R G + A K I +W ++SA H
Sbjct: 503 LVDMYARCGSVEDAYK-IFTCTKNRNLILWTAMISAYGMH 541
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 131/464 (28%), Positives = 223/464 (48%), Gaps = 41/464 (8%)
Query: 74 MYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVL---KEMWVLGLE 130
MY KC + + + D+M R S+ +WN+++ + N EA+ L +EM LG+
Sbjct: 1 MYGKCGSVLDAEMIFDKMSER--SIFTWNAMMGGYVS---NGEALGALEMYREMRHLGVS 55
Query: 131 LSASTFVSVVSGCSFRQ----GISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARS 186
+ TF ++ C + G +H K G ++ + + NS++++YAK +N AR
Sbjct: 56 FDSYTFPVLLKACGIVEDLFCGAEIHGLAIKYGC-DSFVFVVNSLVALYAKCNDINGARK 114
Query: 187 IFDEIG-ETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVG 245
+FD + +VSW +II Y G EA L ++M + V + F + C
Sbjct: 115 LFDRMYVRNDVVSWNSIISAYSGNGMCTEALCLFSEMLKAGVVTNTYTFAAALQACEDSS 174
Query: 246 NLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIG 305
+ L + +H+ +LKSG + + N LV+MY + G + A +F + K + W SM+
Sbjct: 175 FIKLGMQIHAAILKSGRVLDVYVANALVAMYVRFGKMPEAAVIFGNLEGKDIVTWNSMLT 234
Query: 306 GYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLES 365
G+ Q G SEA+ F L ++P++ ++ + + A LG L GKEI Y + NG +S
Sbjct: 235 GFIQNGLYSEALEFFYDLQNADLKPDQVSIISIIVASGRLGYLLNGKEIHAYAIKNGFDS 294
Query: 366 NRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQ 425
N V +LI M++KC ++ F+ + KDL W+ GYA + QAL L ++Q
Sbjct: 295 NILVGNTLIDMYAKCCCMSYGGRAFDLMAHKDLISWTTAAAGYAQNKCYLQALELLRQLQ 354
Query: 426 HVEGLKPDAVVYTSILSACS-----------HSGMVDDGLSFFKSMQSNFGIEPSIEHYL 474
+EG+ DA + SIL AC H + GLS +P +++
Sbjct: 355 -MEGMDVDATMIGSILLACRGLNCLGKIKEIHGYTIRGGLS-----------DPVLQN-- 400
Query: 475 CLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNV 518
++D+ G G D A++ + + W ++S C H+ +
Sbjct: 401 TIIDVYGECGIIDYAVRIFESIECK-DVVSWTSMIS-CYVHNGL 442
>gi|118488304|gb|ABK95971.1| unknown [Populus trichocarpa]
Length = 749
Score = 346 bits (887), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 196/612 (32%), Positives = 336/612 (54%), Gaps = 10/612 (1%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+I +NG+ L +++ G N T LV++AC + + DG +H +++K G
Sbjct: 120 LIHGHLDNGALVAGLWWFTNARVAGFEPNISTMVLVIQACRILGTKHDGLILHGYLIKSG 179
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F + VQ L+ MY +D +R++ DEM + V++W+ +I + + + +
Sbjct: 180 FWAISSVQNSLLSMYVD-ADMECARELFDEM--HEKDVIAWSVMIGGYLQWEEPQVGLQM 236
Query: 121 LKEM-WVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGL---LNNEIPLANSVMSMYA 176
++M V G+E VSV+ C+ + + V+ L + + ++ + NS++ MY+
Sbjct: 237 FRKMVLVPGIEPDGVVMVSVLKACASSRDVCTGRLVHGLVIHRGFDCDLFVENSLIDMYS 296
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K A +F+EI + + VSW +++ G+V N +EA L + MR+ V D V +N
Sbjct: 297 KCKDAGSAFKVFNEISQRNNVSWNSMLSGFVLNENYSEAQSLISSMRKERVETDEVTLVN 356
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
++ C + F S+H ++++ G + + + L+ Y KC +E+A VF + +
Sbjct: 357 ILQICKYFVHPFHCKSIHCVMIRRGSEANELVLSALIDAYAKCYLIEIAWEVFARMRRRD 416
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEE 356
V W++MI G+A G P EA+ +++ + + V+PN T+ L AC+ L + K
Sbjct: 417 VVSWSTMISGFAHCGKPDEAIAVYQEMDRDLVKPNVITIINLLEACSVTAELKRSKWAHG 476
Query: 357 YIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQ 416
+ G S V T+++ M+SKCG I ++ F+++ K++ WSAMI Y ++G+ +
Sbjct: 477 VAIRQGFASEVTVGTAVVDMYSKCGEILASRRAFDQLALKNIVTWSAMIAAYGMNGLAHE 536
Query: 417 ALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCL 476
AL LF +M+ GLKP+ V S+L+ACSH G+V++GLS FKSM G+EP EHY C+
Sbjct: 537 ALALFAEMKR-HGLKPNPVTTLSVLAACSHGGLVEEGLSLFKSMVQELGLEPGFEHYSCM 595
Query: 477 VDLLGRAGRFDLALKTIHEMPVEVQ--AQVWAPLLSACMKHHNVELGEYAAKNLLTLNPG 534
VD+LGRAG+ D A++ I MP ++ A +W LLSAC + ELG+ A +L L P
Sbjct: 596 VDMLGRAGKLDTAIEVIKAMPDNLKNGASIWGSLLSACRSYGLTELGKEAISRVLELEPS 655
Query: 535 STGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHL 594
++ Y++ ++++ + G+W +AA R L ++ + G+S V ID FVAGD SH
Sbjct: 656 NSAGYLVASSMYAADGLWDDAARIRVLAKEKGVKVVAGYSLVHIDNKACRFVAGDGSHPR 715
Query: 595 SVDIRKTLKELH 606
S +I ++LH
Sbjct: 716 SDEIFSMAQQLH 727
Score = 194 bits (492), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 134/455 (29%), Positives = 228/455 (50%), Gaps = 21/455 (4%)
Query: 2 IRNSTNNGSFEETLSTYSSMLQTGVHGNSFT-FPLVLKACANINSIWDGKRVHSHVLKVG 60
I+ S+ NG ++E +S Y + + G+ + FP +LKA + + S GK +H+ ++K G
Sbjct: 19 IKESSANGKWQEVVSHYHEIKKAGIQTVDVSVFPPILKAWSFL-SHRHGKSLHACLIKQG 77
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F + ++ Y +C DF + V + M R R VSWN +I H D LV
Sbjct: 78 FDSFTSIGNSIMGFYIRCGDFDIAVDVFNSMR-RSRDSVSWNILIHGHL-----DNGALV 131
Query: 121 LKEMW-----VLGLELSASTFVSVVSGCSF----RQGISMHCCVYKLGLLNNEIPLANSV 171
W V G E + ST V V+ C G+ +H + K G + NS+
Sbjct: 132 AGLWWFTNARVAGFEPNISTMVLVIQACRILGTKHDGLILHGYLIKSGFWAIS-SVQNSL 190
Query: 172 MSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRM-SVTPD 230
+SMY + AR +FDE+ E +++W+ +IGGY+ + +M + + PD
Sbjct: 191 LSMYVD-ADMECARELFDEMHEKDVIAWSVMIGGYLQWEEPQVGLQMFRKMVLVPGIEPD 249
Query: 231 LVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFD 290
VV ++++ CA ++ +H L++ G++ + ++N L+ MY+KC D A +VF+
Sbjct: 250 GVVMVSVLKACASSRDVCTGRLVHGLVIHRGFDCDLFVENSLIDMYSKCKDAGSAFKVFN 309
Query: 291 AVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSK 350
+ +++ W SM+ G+ SEA +L + K V +E TL L C
Sbjct: 310 EISQRNNVSWNSMLSGFVLNENYSEAQSLISSMRKERVETDEVTLVNILQICKYFVHPFH 369
Query: 351 GKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAI 410
K I ++ G E+N V ++LI ++KC I A EVF R+ +D+ WS MI+G+A
Sbjct: 370 CKSIHCVMIRRGSEANELVLSALIDAYAKCYLIEIAWEVFARMRRRDVVSWSTMISGFAH 429
Query: 411 HGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACS 445
G D+A+ ++ +M + +KP+ + ++L ACS
Sbjct: 430 CGKPDEAIAVYQEMDR-DLVKPNVITIINLLEACS 463
Score = 145 bits (367), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 89/321 (27%), Positives = 159/321 (49%), Gaps = 8/321 (2%)
Query: 131 LSASTFVSVVSGCSF---RQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSI 187
+ S F ++ SF R G S+H C+ K G ++ + NS+M Y + G + A +
Sbjct: 46 VDVSVFPPILKAWSFLSHRHGKSLHACLIKQGF-DSFTSIGNSIMGFYIRCGDFDIAVDV 104
Query: 188 FDEIGET-SIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGN 246
F+ + + VSW +I G+++ G + R P++ + +I C +G
Sbjct: 105 FNSMRRSRDSVSWNILIHGHLDNGALVAGLWWFTNARVAGFEPNISTMVLVIQACRILGT 164
Query: 247 LFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGG 306
L +H L+KSG+ + N L+SMY D+E AR +FD + EK V W+ MIGG
Sbjct: 165 KHDGLILHGYLIKSGFWAISSVQNSLLSMYVD-ADMECARELFDEMHEKDVIAWSVMIGG 223
Query: 307 YAQLGYPSEAVNLFKRL-LKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLES 365
Y Q P + +F+++ L + P+ + + L ACA + G+ + ++ G +
Sbjct: 224 YLQWEEPQVGLQMFRKMVLVPGIEPDGVVMVSVLKACASSRDVCTGRLVHGLVIHRGFDC 283
Query: 366 NRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQ 425
+ V+ SLI M+SKC A +VF + ++ W++M++G+ ++ +A +L M+
Sbjct: 284 DLFVENSLIDMYSKCKDAGSAFKVFNEISQRNNVSWNSMLSGFVLNENYSEAQSLISSMR 343
Query: 426 HVEGLKPDAVVYTSILSACSH 446
E ++ D V +IL C +
Sbjct: 344 K-ERVETDEVTLVNILQICKY 363
Score = 44.3 bits (103), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 51/264 (19%), Positives = 109/264 (41%), Gaps = 12/264 (4%)
Query: 300 WTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIV 359
W I + G E V+ + + K ++ + ++ + S GK + ++
Sbjct: 15 WILRIKESSANGKWQEVVSHYHEIKKAGIQTVDVSVFPPILKAWSFLSHRHGKSLHACLI 74
Query: 360 LNGLESNRQVQTSLIHMFSKCGRINKAKEVFERV-PDKDLAVWSAMINGYAIHGMGDQAL 418
G +S + S++ + +CG + A +VF + +D W+ +I+G+ +G L
Sbjct: 75 KQGFDSFTSIGNSIMGFYIRCGDFDIAVDVFNSMRRSRDSVSWNILIHGHLDNGALVAGL 134
Query: 419 NLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSM-QSNFGIEPSIEHYLC-- 475
F + V G +P+ ++ AC G DGL + +S F S+++ L
Sbjct: 135 WWFTNAR-VAGFEPNISTMVLVIQACRILGTKHDGLILHGYLIKSGFWAISSVQNSLLSM 193
Query: 476 LVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGS 535
VD + A + EM E W+ ++ ++ ++G + ++ L PG
Sbjct: 194 YVD-----ADMECARELFDEMH-EKDVIAWSVMIGGYLQWEEPQVGLQMFRKMV-LVPGI 246
Query: 536 TGNYILMANLFTSAGMWKEAATAR 559
+ ++M ++ + ++ T R
Sbjct: 247 EPDGVVMVSVLKACASSRDVCTGR 270
>gi|125555495|gb|EAZ01101.1| hypothetical protein OsI_23130 [Oryza sativa Indica Group]
Length = 766
Score = 345 bits (886), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 200/623 (32%), Positives = 337/623 (54%), Gaps = 10/623 (1%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+I NG + L +SSML++G + F ++AC + + G++VH+H LK
Sbjct: 123 VIAAHVQNGRAGDALGLFSSMLRSGTAADQFALGSAVRACTELGDVGTGRQVHAHALKSE 182
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
D VQ L+ MYSK + V +L E ++ + ++SW SII+ ++ EA+ V
Sbjct: 183 RGSDLIVQNALVTMYSK-NGLVDDGFMLFER-IKDKDLISWGSIIAGFAQQGFEMEALQV 240
Query: 121 LKEMWVLGLELSAS-TFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMY 175
++M V G F S C S+ G +H K L+ ++ + S+ MY
Sbjct: 241 FRKMIVEGSHHPNEFHFGSAFRACGAVGSWEYGEQIHGLSIKY-RLDRDLYVGCSLSDMY 299
Query: 176 AKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFL 235
A+F ++ AR F I +VSW +I+ Y G ++EA L ++MR + PD +
Sbjct: 300 ARFKNLDSARVAFYRIEAPDLVSWNSIVNAYSVEGLLSEALVLFSEMRDSGLRPDGITVR 359
Query: 236 NLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEK 295
L+ C L+ +HS L+K G + + + N L+SMY +C DL A VF + ++
Sbjct: 360 GLLCACVGRDALYHGRLIHSYLVKLGLDGDVSVCNSLLSMYARCSDLSSAMDVFHEIKDQ 419
Query: 296 SVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIE 355
V W S++ AQ +P E + LF L K+ + +L LSA AELG K++
Sbjct: 420 DVVTWNSILTACAQHNHPEEVLKLFSLLNKSEPSLDRISLNNVLSASAELGYFEMVKQVH 479
Query: 356 EYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPD-KDLAVWSAMINGYAIHGMG 414
Y GL +R + +LI ++KCG ++ A +FE + + +D+ WS++I GYA G
Sbjct: 480 AYAFKAGLVDDRMLSNTLIDTYAKCGSLDDAMRLFEIMGNNRDVFSWSSLIVGYAQFGYA 539
Query: 415 DQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYL 474
+AL+LF +M+ + G++P+ V + +L+ACS G V++G ++ M+ +GI P+ EH
Sbjct: 540 KEALDLFSRMRSL-GIRPNHVTFIGVLTACSRVGFVNEGCYYYSIMEPEYGIVPTREHCS 598
Query: 475 CLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPG 534
C+VDLL RAG+ A I +MP E +W LL+A H+++E+G+ AA+ +L ++P
Sbjct: 599 CIVDLLARAGKLTEAANFIDQMPFEPDIIMWKTLLAASKMHNDMEMGKRAAEGILNIDPS 658
Query: 535 STGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHL 594
+ Y+L+ N++ ++G W E A + M + K PG S V++ G ++VF+ DRSH
Sbjct: 659 HSAAYVLLCNIYAASGNWNEFARLKKAMRTSGVKKSPGKSWVKLKGELKVFIVEDRSHPE 718
Query: 595 SVDIRKTLKELHIKLLEAGYIAE 617
S +I L+ + +++++AGY+ +
Sbjct: 719 SEEIYAMLELIGMEMIKAGYVPK 741
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 110/410 (26%), Positives = 202/410 (49%), Gaps = 11/410 (2%)
Query: 167 LANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMS 226
L N +++MY + + AR +FDE+ + VSW ++I +V G +A GL + M R
Sbjct: 88 LGNHLITMYGRCAAPDSARQVFDEMPARNPVSWASVIAAHVQNGRAGDALGLFSSMLRSG 147
Query: 227 VTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELAR 286
D + + C ++G++ +H+ LKS ++ + N LV+MY+K G ++
Sbjct: 148 TAADQFALGSAVRACTELGDVGTGRQVHAHALKSERGSDLIVQNALVTMYSKNGLVDDGF 207
Query: 287 RVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLL-KTSVRPNEATLATTLSACAEL 345
+F+ + +K + W S+I G+AQ G+ EA+ +F++++ + S PNE + AC +
Sbjct: 208 MLFERIKDKDLISWGSIIAGFAQQGFEMEALQVFRKMIVEGSHHPNEFHFGSAFRACGAV 267
Query: 346 GSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMI 405
GS G++I + L+ + V SL M+++ ++ A+ F R+ DL W++++
Sbjct: 268 GSWEYGEQIHGLSIKYRLDRDLYVGCSLSDMYARFKNLDSARVAFYRIEAPDLVSWNSIV 327
Query: 406 NGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFG 465
N Y++ G+ +AL LF +M+ GL+PD + +L AC + G S G
Sbjct: 328 NAYSVEGLLSEALVLFSEMRD-SGLRPDGITVRGLLCACVGRDALYHG-RLIHSYLVKLG 385
Query: 466 IEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVE----LG 521
++ + L+ + R A+ HE+ + W +L+AC +H++ E L
Sbjct: 386 LDGDVSVCNSLLSMYARCSDLSSAMDVFHEIK-DQDVVTWNSILTACAQHNHPEEVLKLF 444
Query: 522 EYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEA---ATARGLMDDRRLT 568
K+ +L+ S N + + M K+ A GL+DDR L+
Sbjct: 445 SLLNKSEPSLDRISLNNVLSASAELGYFEMVKQVHAYAFKAGLVDDRMLS 494
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 128/505 (25%), Positives = 228/505 (45%), Gaps = 49/505 (9%)
Query: 33 FPLVLKACANINSIWDGKRVHSHVL-------KVGFQQDAFVQTGLIDMYSKCSDFVSSR 85
+ ++ AC+ + S+ G+RVH H++ + + LI MY +C+ S+R
Sbjct: 47 YAALVSACSRLRSLPQGRRVHRHLVASSSSSPDAQLAGNTVLGNHLITMYGRCAAPDSAR 106
Query: 86 KVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCS- 144
+V DEMP R+ VSW S+I+AH + +A+ + M G S V C+
Sbjct: 107 QVFDEMPA--RNPVSWASVIAAHVQNGRAGDALGLFSSMLRSGTAADQFALGSAVRACTE 164
Query: 145 ---FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTT 201
G +H K +++ + N++++MY+K G V++ +F+ I + ++SW +
Sbjct: 165 LGDVGTGRQVHAHALK-SERGSDLIVQNALVTMYSKNGLVDDGFMLFERIKDKDLISWGS 223
Query: 202 IIGGYVNVGNVNEAFGLCNQM-RRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKS 260
II G+ G EA + +M S P+ F + C VG+ +H L +K
Sbjct: 224 IIAGFAQQGFEMEALQVFRKMIVEGSHHPNEFHFGSAFRACGAVGSWEYGEQIHGLSIKY 283
Query: 261 GYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLF 320
+ + + L MY + +L+ AR F + + W S++ Y+ G SEA+ LF
Sbjct: 284 RLDRDLYVGCSLSDMYARFKNLDSARVAFYRIEAPDLVSWNSIVNAYSVEGLLSEALVLF 343
Query: 321 KRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKC 380
+ + +RP+ T+ L AC +L G+ I Y+V GL+ + V SL+ M+++C
Sbjct: 344 SEMRDSGLRPDGITVRGLLCACVGRDALYHGRLIHSYLVKLGLDGDVSVCNSLLSMYARC 403
Query: 381 GRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSI 440
++ A +VF + D+D+ W++++ A H ++ L LF + E D + ++
Sbjct: 404 SDLSSAMDVFHEIKDQDVVTWNSILTACAQHNHPEEVLKLFSLLNKSEP-SLDRISLNNV 462
Query: 441 LSACSH----------------SGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAG 484
LSA + +G+VDD M SN L+D + G
Sbjct: 463 LSASAELGYFEMVKQVHAYAFKAGLVDD------RMLSN-----------TLIDTYAKCG 505
Query: 485 RFDLALKTIHEMPVEVQAQVWAPLL 509
D A++ M W+ L+
Sbjct: 506 SLDDAMRLFEIMGNNRDVFSWSSLI 530
>gi|413946633|gb|AFW79282.1| hypothetical protein ZEAMMB73_599854 [Zea mays]
Length = 863
Score = 345 bits (886), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 206/629 (32%), Positives = 329/629 (52%), Gaps = 31/629 (4%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
M+ +G +E L Y M+ GV + +TFP VL++C + G+ VH+HVL+ G
Sbjct: 160 MVGGYGKSGLLDEALDLYHRMMWAGVRPDVYTFPCVLRSCGGVPDWRMGREVHAHVLRFG 219
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSR---------- 110
F ++ V L+ MY+KC D +++RKV D M V +SWN++I+ H
Sbjct: 220 FGEEVDVLNALMTMYAKCGDVMAARKVFDSMTVM--DCISWNAMIAGHFENGECNAGLEL 277
Query: 111 --ACLNDEA---ILVLKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGLLNNEI 165
L+DE ++ + + V LS TF + G + ++G + ++
Sbjct: 278 FLTMLHDEVQPNLMTITSVTVASGLLSDVTFAKEMHGLAVKRGFA------------GDV 325
Query: 166 PLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRM 225
NS++ MYA G + +AR++F + ++WT +I GY G ++A + M
Sbjct: 326 AFCNSLIQMYASLGMMRQARTVFSRMDTRDAMTWTAMISGYEKNGFPDKALEVYALMEVN 385
Query: 226 SVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELA 285
+V+PD + + + CA +G+L + + +H L G+ + + N ++ MY K ++ A
Sbjct: 386 NVSPDDITIASALAACACLGSLDVGVKLHELAESKGFISYIVVTNAILEMYAKSKRIDKA 445
Query: 286 RRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAEL 345
VF + EK V W+SMI G+ EA+ F+ +L V+PN T L+ACA
Sbjct: 446 IEVFKCMHEKDVVSWSSMIAGFCFNHRNFEALYYFRHML-ADVKPNSVTFIAALAACAAT 504
Query: 346 GSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMI 405
G+L GKEI +++ G+E + +LI ++ KCG+ A F KD+ W+ MI
Sbjct: 505 GALRSGKEIHAHVLRCGIEYEGYLPNALIDLYVKCGQTGYAWAQFCAHGAKDVVSWNIMI 564
Query: 406 NGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFG 465
G+ HG GD AL+ F +M + G PD V + ++L ACS GMV +G F SM +
Sbjct: 565 AGFVAHGHGDTALSFFNQMVKI-GECPDEVTFVALLCACSRGGMVSEGWELFHSMTEKYS 623
Query: 466 IEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAA 525
I P+++HY C+VDLL RAG+ A I+EMP+ A VW LL+ C H +VELGE AA
Sbjct: 624 IVPNLKHYACMVDLLSRAGQLTEAYNFINEMPITPDAAVWGALLNGCRIHRHVELGELAA 683
Query: 526 KNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVF 585
K +L L P G ++L+ +L+ A +W + A R M ++ L + G S VE+ G V F
Sbjct: 684 KYVLALEPNDAGYHVLLCDLYADACLWDKLARVRKTMREKGLDHDSGCSWVEVKGVVHAF 743
Query: 586 VAGDRSHHLSVDIRKTLKELHIKLLEAGY 614
+ D SH +I L+ ++ ++ +GY
Sbjct: 744 LTDDESHPQIREINTVLEGIYERMKASGY 772
Score = 176 bits (445), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 111/356 (31%), Positives = 185/356 (51%), Gaps = 9/356 (2%)
Query: 86 KVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGC-- 143
+V +MP R V SWN ++ + ++ L DEA+ + M G+ TF V+ C
Sbjct: 144 RVFAKMPER--DVFSWNVMVGGYGKSGLLDEALDLYHRMMWAGVRPDVYTFPCVLRSCGG 201
Query: 144 --SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTT 201
+R G +H V + G E+ + N++M+MYAK G V AR +FD + +SW
Sbjct: 202 VPDWRMGREVHAHVLRFGF-GEEVDVLNALMTMYAKCGDVMAARKVFDSMTVMDCISWNA 260
Query: 202 IIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSG 261
+I G+ G N L M V P+L+ ++ + + ++ A MH L +K G
Sbjct: 261 MIAGHFENGECNAGLELFLTMLHDEVQPNLMTITSVTVASGLLSDVTFAKEMHGLAVKRG 320
Query: 262 YNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFK 321
+ + N L+ MY G + AR VF + + WT+MI GY + G+P +A+ ++
Sbjct: 321 FAGDVAFCNSLIQMYASLGMMRQARTVFSRMDTRDAMTWTAMISGYEKNGFPDKALEVYA 380
Query: 322 RLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCG 381
+ +V P++ T+A+ L+ACA LGSL G ++ E G S V +++ M++K
Sbjct: 381 LMEVNNVSPDDITIASALAACACLGSLDVGVKLHELAESKGFISYIVVTNAILEMYAKSK 440
Query: 382 RINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVY 437
RI+KA EVF+ + +KD+ WS+MI G+ + +AL F M + +KP++V +
Sbjct: 441 RIDKAIEVFKCMHEKDVVSWSSMIAGFCFNHRNFEALYYFRHM--LADVKPNSVTF 494
>gi|297835788|ref|XP_002885776.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331616|gb|EFH62035.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 582
Score = 345 bits (886), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 190/577 (32%), Positives = 327/577 (56%), Gaps = 7/577 (1%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+I + NG + + MLQ G ++ T +L C + G+ VH K G
Sbjct: 12 LICGYSRNGYESDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQGRSVHGIAAKSG 71
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+ D+ V+ LI YSKC++ S+ + EM + +S VSWN++I A+S++ L +EAI V
Sbjct: 72 LEMDSQVKNALISFYSKCAELDSAEVLFREM--KDKSTVSWNTMIGAYSQSGLMEEAITV 129
Query: 121 LKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGK 180
K M+ +E+S T ++++S + +HC V K G++N +I + S++ Y++ G
Sbjct: 130 FKNMFEKSVEISPVTIINLLSAHVSHE--PLHCLVVKSGMVN-DISVVTSLVCAYSRCGY 186
Query: 181 VNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILG 240
++ A ++ + SIV T+I+ Y G+++ A ++MR++ + D V + ++ G
Sbjct: 187 LDSAERLYASANQDSIVGLTSIVSSYAEKGDMDIAVVYFSKMRQLCMKIDAVALVGILHG 246
Query: 241 CAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLW 300
C ++ + +S+H +KSG + + N L++MY+K D+E +F + E + W
Sbjct: 247 CKNSSHIDIGMSLHGYAIKSGLCRKTLVVNGLITMYSKFDDVETVLFLFQQLQETPLISW 306
Query: 301 TSMIGGYAQLGYPSEAVNLFKRL-LKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIV 359
S+I G Q G S A +F ++ L + P+ T+A+ L+ C++L L+ GKE+ Y +
Sbjct: 307 NSVISGCVQSGRASTAFEVFHQMKLSGGLLPDAITIASLLAGCSQLCCLNLGKELHGYTL 366
Query: 360 LNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALN 419
N E+ V T+LI M++KCG +A+ VF+ + A W++MI+GY++ G+ ++AL+
Sbjct: 367 RNNFENENFVCTALIDMYAKCGNEVQAESVFKSIKAPCTATWNSMISGYSLSGLQNRALS 426
Query: 420 LFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDL 479
+ +M+ +GLKPD + + +LSAC+H G VD+G +F++M FGI P ++HY +V L
Sbjct: 427 CYLEMRE-KGLKPDKITFLGVLSACTHGGFVDEGKIYFRAMIKEFGISPCLQHYALMVGL 485
Query: 480 LGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNY 539
LGRA F AL I +M ++ + VW LLSAC+ H +E+GEY AK + L+ + G Y
Sbjct: 486 LGRACLFTEALYLIWKMDIKPDSAVWGALLSACIIHRELEVGEYIAKKMFMLDYKNGGLY 545
Query: 540 ILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQV 576
+LM+NL+ + MW + R +M D G SQ+
Sbjct: 546 VLMSNLYATEAMWDDVVRVRKMMKDNGYDGYLGVSQI 582
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 119/441 (26%), Positives = 209/441 (47%), Gaps = 32/441 (7%)
Query: 96 RSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCS----FRQGISM 151
R V WN++I +SR +A + M G SA+T V+++ C QG S+
Sbjct: 4 RDTVVWNALICGYSRNGYESDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQGRSV 63
Query: 152 HCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGN 211
H K G L + + N+++S Y+K +++ A +F E+ + S VSW T+IG Y G
Sbjct: 64 HGIAAKSG-LEMDSQVKNALISFYSKCAELDSAEVLFREMKDKSTVSWNTMIGAYSQSGL 122
Query: 212 VNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNL 271
+ EA + M SV V +NL+ A V + +H L++KSG N+ +
Sbjct: 123 MEEAITVFKNMFEKSVEISPVTIINLL--SAHVSH----EPLHCLVVKSGMVNDISVVTS 176
Query: 272 LVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPN 331
LV Y++CG L+ A R++ + + S+ TS++ YA+ G AV F ++ + ++ +
Sbjct: 177 LVCAYSRCGYLDSAERLYASANQDSIVGLTSIVSSYAEKGDMDIAVVYFSKMRQLCMKID 236
Query: 332 EATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFE 391
L L C + G + Y + +GL V LI M+SK + +F+
Sbjct: 237 AVALVGILHGCKNSSHIDIGMSLHGYAIKSGLCRKTLVVNGLITMYSKFDDVETVLFLFQ 296
Query: 392 RVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVD 451
++ + L W+++I+G G A +F++M+ GL PDA+ S+L+ CS ++
Sbjct: 297 QLQETPLISWNSVISGCVQSGRASTAFEVFHQMKLSGGLLPDAITIASLLAGCSQLCCLN 356
Query: 452 DGLSFFK-SMQSNFGIEPSIEHYLC--LVDLLGRAGRFDLALKTIHEMPVEVQAQ-VWAP 507
G ++++NF E+++C L+D+ + G EVQA+ V+
Sbjct: 357 LGKELHGYTLRNNF----ENENFVCTALIDMYAKCGN-------------EVQAESVFKS 399
Query: 508 LLSACMKHHNVELGEYAAKNL 528
+ + C N + Y+ L
Sbjct: 400 IKAPCTATWNSMISGYSLSGL 420
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 78/264 (29%), Positives = 134/264 (50%), Gaps = 7/264 (2%)
Query: 193 ETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALS 252
E V W +I GY G ++A+ L M + +P +NL+ C Q G + S
Sbjct: 3 ERDTVVWNALICGYSRNGYESDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQGRS 62
Query: 253 MHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGY 312
+H + KSG + + N L+S Y+KC +L+ A +F + +KS W +MIG Y+Q G
Sbjct: 63 VHGIAAKSGLEMDSQVKNALISFYSKCAELDSAEVLFREMKDKSTVSWNTMIGAYSQSGL 122
Query: 313 PSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTS 372
EA+ +FK + + SV + T+ LSA + + +V +G+ ++ V TS
Sbjct: 123 MEEAITVFKNMFEKSVEISPVTIINLLSAHVS------HEPLHCLVVKSGMVNDISVVTS 176
Query: 373 LIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKP 432
L+ +S+CG ++ A+ ++ + +++++ YA G D A+ F KM+ + +K
Sbjct: 177 LVCAYSRCGYLDSAERLYASANQDSIVGLTSIVSSYAEKGDMDIAVVYFSKMRQL-CMKI 235
Query: 433 DAVVYTSILSACSHSGMVDDGLSF 456
DAV IL C +S +D G+S
Sbjct: 236 DAVALVGILHGCKNSSHIDIGMSL 259
Score = 46.2 bits (108), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 45/104 (43%), Gaps = 2/104 (1%)
Query: 393 VPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDD 452
+P++D VW+A+I GY+ +G A LF M +G P A ++L C G V
Sbjct: 1 MPERDTVVWNALICGYSRNGYESDAWKLFIVMLQ-QGFSPSATTLVNLLPFCGQCGFVSQ 59
Query: 453 GLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEM 496
G S + + G+E + L+ + D A EM
Sbjct: 60 GRS-VHGIAAKSGLEMDSQVKNALISFYSKCAELDSAEVLFREM 102
>gi|224132434|ref|XP_002328268.1| predicted protein [Populus trichocarpa]
gi|222837783|gb|EEE76148.1| predicted protein [Populus trichocarpa]
Length = 749
Score = 345 bits (886), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 196/612 (32%), Positives = 336/612 (54%), Gaps = 10/612 (1%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+I +NG+ L +++ G N T LV++AC + + DG +H +++K G
Sbjct: 120 LIHGHLDNGALVAGLWWFTNARVAGFEPNISTMVLVIQACRILGTKHDGLILHGYLIKSG 179
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F + VQ L+ MY +D +R++ DEM + V++W+ +I + + + +
Sbjct: 180 FWAISSVQNSLLSMYVD-ADMECARELFDEM--HEKDVIAWSVMIGGYLQWEEPQVGLQM 236
Query: 121 LKEM-WVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGL---LNNEIPLANSVMSMYA 176
++M V G+E VSV+ C+ + + V+ L + + ++ + NS++ MY+
Sbjct: 237 FRKMVLVPGIEPDGVVMVSVLKACASSRDVCTGRLVHGLVIHRGFDCDLFVENSLIDMYS 296
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K A +F+EI + + VSW +++ G+V N +EA L + MR+ V D V +N
Sbjct: 297 KCKDAGSAFKVFNEISQRNNVSWNSMLSGFVLNENYSEAQSLISSMRKERVETDEVTLVN 356
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
++ C + F S+H ++++ G + + + L+ Y KC +E+A VF + +
Sbjct: 357 ILQICKYFVHPFHCKSIHCVMIRRGSEANELVLSALIDAYAKCYLIEIAWEVFARMRRRD 416
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEE 356
V W++MI G+A G P EA+ +++ + + V+PN T+ L AC+ L + K
Sbjct: 417 VVSWSTMISGFAHCGKPDEAIAVYQEMDRDLVKPNVITIINLLEACSVTAELKRSKWAHG 476
Query: 357 YIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQ 416
+ G S V T+++ M+SKCG I ++ F+++ K++ WSAMI Y ++G+ +
Sbjct: 477 VAIRQGFASEVTVGTAVVDMYSKCGEILASRRAFDQLALKNIVTWSAMIAAYGMNGLAHE 536
Query: 417 ALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCL 476
AL LF +M+ GLKP+ V S+L+ACSH G+V++GLS FKSM G+EP EHY C+
Sbjct: 537 ALALFAEMKR-HGLKPNPVTTLSVLAACSHGGLVEEGLSLFKSMVQELGLEPGFEHYSCM 595
Query: 477 VDLLGRAGRFDLALKTIHEMPVEVQ--AQVWAPLLSACMKHHNVELGEYAAKNLLTLNPG 534
VD+LGRAG+ D A++ I MP ++ A +W LLSAC + ELG+ A +L L P
Sbjct: 596 VDMLGRAGKLDTAIEVIKAMPHNLKNGASIWGSLLSACRSYGLTELGKEAISRVLELEPS 655
Query: 535 STGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHL 594
++ Y++ ++++ + G+W +AA R L ++ + G+S V ID FVAGD SH
Sbjct: 656 NSAGYLVASSMYAADGLWDDAARIRVLAKEKGVKVVAGYSLVHIDNKACRFVAGDGSHPR 715
Query: 595 SVDIRKTLKELH 606
S +I ++LH
Sbjct: 716 SDEIFSMAQQLH 727
Score = 194 bits (492), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 134/455 (29%), Positives = 228/455 (50%), Gaps = 21/455 (4%)
Query: 2 IRNSTNNGSFEETLSTYSSMLQTGVHGNSFT-FPLVLKACANINSIWDGKRVHSHVLKVG 60
I+ S+ NG ++E +S Y + + G+ + FP +LKA + + S GK +H+ ++K G
Sbjct: 19 IKESSANGKWQEVVSHYHEIKKAGIQTVDVSVFPPILKAWSFL-SHRHGKSLHACLIKQG 77
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F + ++ Y +C DF + V + M R R VSWN +I H D LV
Sbjct: 78 FDSFTSIGNSIMGFYIRCGDFDIAVDVFNSMR-RSRDSVSWNILIHGHL-----DNGALV 131
Query: 121 LKEMW-----VLGLELSASTFVSVVSGCSF----RQGISMHCCVYKLGLLNNEIPLANSV 171
W V G E + ST V V+ C G+ +H + K G + NS+
Sbjct: 132 AGLWWFTNARVAGFEPNISTMVLVIQACRILGTKHDGLILHGYLIKSGFWAIS-SVQNSL 190
Query: 172 MSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRM-SVTPD 230
+SMY + AR +FDE+ E +++W+ +IGGY+ + +M + + PD
Sbjct: 191 LSMYVD-ADMECARELFDEMHEKDVIAWSVMIGGYLQWEEPQVGLQMFRKMVLVPGIEPD 249
Query: 231 LVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFD 290
VV ++++ CA ++ +H L++ G++ + ++N L+ MY+KC D A +VF+
Sbjct: 250 GVVMVSVLKACASSRDVCTGRLVHGLVIHRGFDCDLFVENSLIDMYSKCKDAGSAFKVFN 309
Query: 291 AVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSK 350
+ +++ W SM+ G+ SEA +L + K V +E TL L C
Sbjct: 310 EISQRNNVSWNSMLSGFVLNENYSEAQSLISSMRKERVETDEVTLVNILQICKYFVHPFH 369
Query: 351 GKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAI 410
K I ++ G E+N V ++LI ++KC I A EVF R+ +D+ WS MI+G+A
Sbjct: 370 CKSIHCVMIRRGSEANELVLSALIDAYAKCYLIEIAWEVFARMRRRDVVSWSTMISGFAH 429
Query: 411 HGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACS 445
G D+A+ ++ +M + +KP+ + ++L ACS
Sbjct: 430 CGKPDEAIAVYQEMDR-DLVKPNVITIINLLEACS 463
Score = 145 bits (367), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 89/321 (27%), Positives = 159/321 (49%), Gaps = 8/321 (2%)
Query: 131 LSASTFVSVVSGCSF---RQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSI 187
+ S F ++ SF R G S+H C+ K G ++ + NS+M Y + G + A +
Sbjct: 46 VDVSVFPPILKAWSFLSHRHGKSLHACLIKQGF-DSFTSIGNSIMGFYIRCGDFDIAVDV 104
Query: 188 FDEIGET-SIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGN 246
F+ + + VSW +I G+++ G + R P++ + +I C +G
Sbjct: 105 FNSMRRSRDSVSWNILIHGHLDNGALVAGLWWFTNARVAGFEPNISTMVLVIQACRILGT 164
Query: 247 LFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGG 306
L +H L+KSG+ + N L+SMY D+E AR +FD + EK V W+ MIGG
Sbjct: 165 KHDGLILHGYLIKSGFWAISSVQNSLLSMYVD-ADMECARELFDEMHEKDVIAWSVMIGG 223
Query: 307 YAQLGYPSEAVNLFKRL-LKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLES 365
Y Q P + +F+++ L + P+ + + L ACA + G+ + ++ G +
Sbjct: 224 YLQWEEPQVGLQMFRKMVLVPGIEPDGVVMVSVLKACASSRDVCTGRLVHGLVIHRGFDC 283
Query: 366 NRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQ 425
+ V+ SLI M+SKC A +VF + ++ W++M++G+ ++ +A +L M+
Sbjct: 284 DLFVENSLIDMYSKCKDAGSAFKVFNEISQRNNVSWNSMLSGFVLNENYSEAQSLISSMR 343
Query: 426 HVEGLKPDAVVYTSILSACSH 446
E ++ D V +IL C +
Sbjct: 344 K-ERVETDEVTLVNILQICKY 363
Score = 44.3 bits (103), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 51/264 (19%), Positives = 109/264 (41%), Gaps = 12/264 (4%)
Query: 300 WTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIV 359
W I + G E V+ + + K ++ + ++ + S GK + ++
Sbjct: 15 WILRIKESSANGKWQEVVSHYHEIKKAGIQTVDVSVFPPILKAWSFLSHRHGKSLHACLI 74
Query: 360 LNGLESNRQVQTSLIHMFSKCGRINKAKEVFERV-PDKDLAVWSAMINGYAIHGMGDQAL 418
G +S + S++ + +CG + A +VF + +D W+ +I+G+ +G L
Sbjct: 75 KQGFDSFTSIGNSIMGFYIRCGDFDIAVDVFNSMRRSRDSVSWNILIHGHLDNGALVAGL 134
Query: 419 NLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSM-QSNFGIEPSIEHYLC-- 475
F + V G +P+ ++ AC G DGL + +S F S+++ L
Sbjct: 135 WWFTNAR-VAGFEPNISTMVLVIQACRILGTKHDGLILHGYLIKSGFWAISSVQNSLLSM 193
Query: 476 LVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGS 535
VD + A + EM E W+ ++ ++ ++G + ++ L PG
Sbjct: 194 YVD-----ADMECARELFDEMH-EKDVIAWSVMIGGYLQWEEPQVGLQMFRKMV-LVPGI 246
Query: 536 TGNYILMANLFTSAGMWKEAATAR 559
+ ++M ++ + ++ T R
Sbjct: 247 EPDGVVMVSVLKACASSRDVCTGR 270
>gi|242096002|ref|XP_002438491.1| hypothetical protein SORBIDRAFT_10g020540 [Sorghum bicolor]
gi|241916714|gb|EER89858.1| hypothetical protein SORBIDRAFT_10g020540 [Sorghum bicolor]
Length = 794
Score = 345 bits (886), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 203/640 (31%), Positives = 331/640 (51%), Gaps = 32/640 (5%)
Query: 14 TLSTYSSMLQTGVHGNSFTFPLVLKACANI-NSIWDGKRVHSHVLKVGF--QQDAFVQTG 70
L ML G SFT VL AC+++ + G+ H+ LK GF + F
Sbjct: 144 ALDALRDMLLEGHPLTSFTLVSVLLACSHLAEDLRLGREAHAFALKNGFLDGDERFAFNA 203
Query: 71 LIDMYSKCSDFVSSRKVLDEM---PVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVL 127
L+ MY++ ++ + + V VV+WN+++S ++ EAI VL +M
Sbjct: 204 LLSMYARLGLVDDAQTLFGSVGATDVPGGGVVTWNTMVSLLVQSGRCGEAIEVLYDMVAR 263
Query: 128 GLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNE 183
G+ TF S + CS G MH V K L +A++++ MYA +V
Sbjct: 264 GVRPDGVTFASALPACSQLEMLSLGREMHAYVLKDADLAANSFVASALVDMYASHERVGA 323
Query: 184 ARSIFDEI--GETSIVSWTTIIGGYVNVGNVNEAFGLCNQMR-RMSVTPDLVVFLNLILG 240
AR +FD + GE + W +I GY G +A L +M V P ++
Sbjct: 324 ARLVFDMVPAGERQLGLWNAMICGYAQAGLDEDALELFARMETEAGVVPSETTIAGVLPS 383
Query: 241 CAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLW 300
CA+ ++H ++K G + + N L+ +Y + GD++ AR +F + + V W
Sbjct: 384 CARSETFAGKEAVHGYVVKRGMADNPFVQNALMDLYARLGDMDAARWIFATIEPRDVVSW 443
Query: 301 TSMIGGYAQLGYPSEAVNLFKRLLKT------------------SVRPNEATLATTLSAC 342
++I G G+ +A L + + + V PN TL T L C
Sbjct: 444 NTLITGCVVQGHIRDAFQLVREMQQQGRFTDAATEDGIAGADEEPVVPNNITLMTLLPGC 503
Query: 343 AELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWS 402
A L + ++GKEI Y V + L+S+ V ++L+ M++KCG + ++ VF+R+P +++ W+
Sbjct: 504 AMLAAPARGKEIHGYAVRHALDSDVAVGSALVDMYAKCGCLALSRAVFDRLPRRNVITWN 563
Query: 403 AMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQS 462
+I Y +HG+GD+A+ LF +M + KP+ V + + L+ACSHSGMVD GL F+SM+
Sbjct: 564 VLIMAYGMHGLGDEAIALFDRMVASDEAKPNEVTFIAALAACSHSGMVDRGLEMFRSMKR 623
Query: 463 NFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEM-PVEVQAQVWAPLLSACMKHHNVELG 521
N G+EP+ + + C VD+LGRAGR D A + I M P E Q W+ L AC H NV LG
Sbjct: 624 NHGVEPTPDLHACAVDILGRAGRLDEAYRIISSMEPGEQQVSAWSSFLGACRLHRNVALG 683
Query: 522 EYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGS 581
E AA+ L L P +Y+L+ N++++AG+W++++ R M R ++KEPG S +E+DG
Sbjct: 684 EIAAERLFELEPDEASHYVLLCNIYSAAGLWEKSSEVRSRMRQRGVSKEPGCSWIELDGV 743
Query: 582 VQVFVAGDRSHHLSVDIRKTLKELHIKLLEAGYIAEADIV 621
+ F+AG+ +H S + + L ++ + GY + ++
Sbjct: 744 IHRFMAGESAHPESTLVHAHMDALWERMRDQGYTPDTTLI 783
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 119/460 (25%), Positives = 225/460 (48%), Gaps = 32/460 (6%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLK-V 59
M+ +G E + M+ GV + TF L AC+ + + G+ +H++VLK
Sbjct: 240 MVSLLVQSGRCGEAIEVLYDMVARGVRPDGVTFASALPACSQLEMLSLGREMHAYVLKDA 299
Query: 60 GFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAIL 119
++FV + L+DMY+ ++R V D +P R + WN++I +++A L+++A+
Sbjct: 300 DLAANSFVASALVDMYASHERVGAARLVFDMVPAGERQLGLWNAMICGYAQAGLDEDALE 359
Query: 120 VLKEMWV-LGLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSM 174
+ M G+ S +T V+ C +F ++H V K G+ +N + N++M +
Sbjct: 360 LFARMETEAGVVPSETTIAGVLPSCARSETFAGKEAVHGYVVKRGMADNPF-VQNALMDL 418
Query: 175 YAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRM--------- 225
YA+ G ++ AR IF I +VSW T+I G V G++ +AF L +M++
Sbjct: 419 YARLGDMDAARWIFATIEPRDVVSWNTLITGCVVQGHIRDAFQLVREMQQQGRFTDAATE 478
Query: 226 ---------SVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMY 276
V P+ + + L+ GCA + +H ++ +++ + + LV MY
Sbjct: 479 DGIAGADEEPVVPNNITLMTLLPGCAMLAAPARGKEIHGYAVRHALDSDVAVGSALVDMY 538
Query: 277 TKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTS-VRPNEATL 335
KCG L L+R VFD + ++V W +I Y G EA+ LF R++ + +PNE T
Sbjct: 539 AKCGCLALSRAVFDRLPRRNVITWNVLIMAYGMHGLGDEAIALFDRMVASDEAKPNEVTF 598
Query: 336 ATTLSACAELGSLSKGKEIEEYIVLN-GLESNRQVQTSLIHMFSKCGRINKAKEVFERVP 394
L+AC+ G + +G E+ + N G+E + + + + GR+++A + +
Sbjct: 599 IAALAACSHSGMVDRGLEMFRSMKRNHGVEPTPDLHACAVDILGRAGRLDEAYRIISSME 658
Query: 395 --DKDLAVWSAMINGYAIH---GMGDQALNLFYKMQHVEG 429
++ ++ WS+ + +H +G+ A ++++ E
Sbjct: 659 PGEQQVSAWSSFLGACRLHRNVALGEIAAERLFELEPDEA 698
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 129/435 (29%), Positives = 214/435 (49%), Gaps = 26/435 (5%)
Query: 29 NSFTFPLVLKACANINSIWDGKRVHSHVLKVGF--QQDAFVQTGLIDMYSKCSDFVSSRK 86
+ F P K+ A + S+ + +H L+ V L+ Y++C D ++
Sbjct: 56 DRFALPPAAKSAAALRSLTAVRSIHGAALRHDLLDGPTPAVSNALLTAYARCGDLTAALA 115
Query: 87 VLDEMPVRLRSVVSWNSIISAHSRACLNDE---AILVLKEMWVLGLELSASTFVSVVSGC 143
+ D MP R V++NS+I+A CL A+ L++M + G L++ T VSV+ C
Sbjct: 116 LFDAMPS--RDAVTFNSLIAA---LCLFRRWLPALDALRDMLLEGHPLTSFTLVSVLLAC 170
Query: 144 S-----FRQGISMHCCVYKLGLLNNEIPLA-NSVMSMYAKFGKVNEARSIFDEIGETS-- 195
S R G H K G L+ + A N+++SMYA+ G V++A+++F +G T
Sbjct: 171 SHLAEDLRLGREAHAFALKNGFLDGDERFAFNALLSMYARLGLVDDAQTLFGSVGATDVP 230
Query: 196 ---IVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALS 252
+V+W T++ V G EA + M V PD V F + + C+Q+ L L
Sbjct: 231 GGGVVTWNTMVSLLVQSGRCGEAIEVLYDMVARGVRPDGVTFASALPACSQLEMLSLGRE 290
Query: 253 MHSLLLKSGYNNEDP-LDNLLVSMYTKCGDLELARRVFDAVL--EKSVFLWTSMIGGYAQ 309
MH+ +LK + + + LV MY + AR VFD V E+ + LW +MI GYAQ
Sbjct: 291 MHAYVLKDADLAANSFVASALVDMYASHERVGAARLVFDMVPAGERQLGLWNAMICGYAQ 350
Query: 310 LGYPSEAVNLFKRL-LKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQ 368
G +A+ LF R+ + V P+E T+A L +CA + + + + Y+V G+ N
Sbjct: 351 AGLDEDALELFARMETEAGVVPSETTIAGVLPSCARSETFAGKEAVHGYVVKRGMADNPF 410
Query: 369 VQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVE 428
VQ +L+ ++++ G ++ A+ +F + +D+ W+ +I G + G A L +MQ +
Sbjct: 411 VQNALMDLYARLGDMDAARWIFATIEPRDVVSWNTLITGCVVQGHIRDAFQLVREMQQ-Q 469
Query: 429 GLKPDAVVYTSILSA 443
G DA I A
Sbjct: 470 GRFTDAATEDGIAGA 484
Score = 132 bits (333), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 103/390 (26%), Positives = 187/390 (47%), Gaps = 30/390 (7%)
Query: 150 SMHCCVYKLGLLNNEIP-LANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVN 208
S+H + LL+ P ++N++++ YA+ G + A ++FD + V++ ++I
Sbjct: 78 SIHGAALRHDLLDGPTPAVSNALLTAYARCGDLTAALALFDAMPSRDAVTFNSLIAALCL 137
Query: 209 VGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVG-NLFLALSMHSLLLKSGY--NNE 265
A M ++++L C+ + +L L H+ LK+G+ +E
Sbjct: 138 FRRWLPALDALRDMLLEGHPLTSFTLVSVLLACSHLAEDLRLGREAHAFALKNGFLDGDE 197
Query: 266 DPLDNLLVSMYTKCGDLELARRVFDAVLEKS-----VFLWTSMIGGYAQLGYPSEAVNLF 320
N L+SMY + G ++ A+ +F +V V W +M+ Q G EA+ +
Sbjct: 198 RFAFNALLSMYARLGLVDDAQTLFGSVGATDVPGGGVVTWNTMVSLLVQSGRCGEAIEVL 257
Query: 321 KRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNG-LESNRQVQTSLIHMFSK 379
++ VRP+ T A+ L AC++L LS G+E+ Y++ + L +N V ++L+ M++
Sbjct: 258 YDMVARGVRPDGVTFASALPACSQLEMLSLGREMHAYVLKDADLAANSFVASALVDMYAS 317
Query: 380 CGRINKAKEVFERVP--DKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVY 437
R+ A+ VF+ VP ++ L +W+AMI GYA G+ + AL LF +M+ G+ P
Sbjct: 318 HERVGAARLVFDMVPAGERQLGLWNAMICGYAQAGLDEDALELFARMETEAGVVPSETTI 377
Query: 438 TSILSACSHSGMVD-----DGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLA--- 489
+L +C+ S G + M N P +++ L+DL R G D A
Sbjct: 378 AGVLPSCARSETFAGKEAVHGYVVKRGMADN----PFVQN--ALMDLYARLGDMDAARWI 431
Query: 490 LKTIHEMPVEVQAQVWAPLLSACMKHHNVE 519
TI P +V + W L++ C+ ++
Sbjct: 432 FATIE--PRDVVS--WNTLITGCVVQGHIR 457
>gi|225453758|ref|XP_002270092.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 687
Score = 345 bits (886), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 193/579 (33%), Positives = 330/579 (56%), Gaps = 12/579 (2%)
Query: 45 SIWDGKRVHSHVLKVGFQQDAFVQTGLIDMY--SKCSDFVSSRKVLDEMPVRLRSVVSWN 102
SI K+ H+ +L+ + + LI S D +RK+ +M + N
Sbjct: 23 SISKTKQAHALLLRTHLLHNPLFSSKLISFLALSHSGDLNYARKLFTQMQNPDPFIC--N 80
Query: 103 SIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKL 158
++I ++R+ EA+ + M G+ + T+ V++ C+ + G HC V K
Sbjct: 81 TMIRGYARSQNPYEAVSLYYFMVERGVPVDNYTYPFVLAACARLGAVKLGRRFHCEVLKN 140
Query: 159 GLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGL 218
G +++ + N+++ Y G A +FDE +V+W +I ++N G +AF L
Sbjct: 141 GF-GSDLFVINALIQFYHNCGSFGCACDVFDESTVRDVVTWNIMINAHLNKGLSEKAFDL 199
Query: 219 CNQMRRM-SVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYT 277
++M ++ ++ PD V ++L+ CAQ+GNL +HS + G + ++N ++ MY
Sbjct: 200 LDEMTKLDNLRPDEVTMVSLVPACAQLGNLERGKFLHSYSKELGLDENLRVNNAILDMYC 259
Query: 278 KCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLAT 337
KC D+E A+ VF+ + EK V WTSM+ G A+ GY EA+ LF+++ + +E TL
Sbjct: 260 KCDDIESAQEVFNRIREKDVLSWTSMLSGLAKSGYFQEALALFQKMQLNKIELDEITLVG 319
Query: 338 TLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKD 397
LSACA+ G+L +GK I I + + ++T+L+ M++KCG I+ A +VF R+ ++
Sbjct: 320 VLSACAQTGALDQGKYIHLLIDKFEINCDLVLETALVDMYAKCGSIDLALQVFRRMRVRN 379
Query: 398 LAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFF 457
+ W+A+I G A+HG G+ A++LF +M+H + L PD V + ++L ACSH+G+VD+GL+ F
Sbjct: 380 VFTWNALIGGLAMHGHGEDAISLFDQMEH-DKLMPDDVTFIALLCACSHAGLVDEGLAMF 438
Query: 458 KSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHN 517
++M++ F IEP +EHY C+VDLL RA + D AL I MP++ + +WA LL AC +
Sbjct: 439 QAMKNKFQIEPRMEHYGCVVDLLCRARKVDDALAFIENMPIKANSVLWATLLGACRSGGH 498
Query: 518 VELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVE 577
+L E + ++ L P S G Y++++NL+ W A R M ++ + K PG S +E
Sbjct: 499 FDLAEKIGRRVIELEPDSCGRYVMLSNLYAGVSQWDHALKLRKQMKNKGIEKTPGCSWIE 558
Query: 578 IDGSVQVFVAGDRSHHLSVDIRKTLKELHIKL-LEAGYI 615
++G + FVAGDRSH + I ++E+ ++ L+ G++
Sbjct: 559 LNGMIHQFVAGDRSHLQTEQIYAMIEEMTRRVNLDGGHV 597
Score = 209 bits (532), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 145/483 (30%), Positives = 243/483 (50%), Gaps = 27/483 (5%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MIR + + E +S Y M++ GV +++T+P VL ACA + ++ G+R H VLK G
Sbjct: 82 MIRGYARSQNPYEAVSLYYFMVERGVPVDNYTYPFVLAACARLGAVKLGRRFHCEVLKNG 141
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F D FV LI Y C F + V DE V R VV+WN +I+AH L+++A +
Sbjct: 142 FGSDLFVINALIQFYHNCGSFGCACDVFDESTV--RDVVTWNIMINAHLNKGLSEKAFDL 199
Query: 121 LKEMWVL-GLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMY 175
L EM L L T VS+V C+ +G +H +LGL N + + N+++ MY
Sbjct: 200 LDEMTKLDNLRPDEVTMVSLVPACAQLGNLERGKFLHSYSKELGLDEN-LRVNNAILDMY 258
Query: 176 AKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFL 235
K + A+ +F+ I E ++SWT+++ G G EA L +M+ + D + +
Sbjct: 259 CKCDDIESAQEVFNRIREKDVLSWTSMLSGLAKSGYFQEALALFQKMQLNKIELDEITLV 318
Query: 236 NLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEK 295
++ CAQ G L +H L+ K N + L+ LV MY KCG ++LA +VF + +
Sbjct: 319 GVLSACAQTGALDQGKYIHLLIDKFEINCDLVLETALVDMYAKCGSIDLALQVFRRMRVR 378
Query: 296 SVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIE 355
+VF W ++IGG A G+ +A++LF ++ + P++ T L AC+ G + +G
Sbjct: 379 NVFTWNALIGGLAMHGHGEDAISLFDQMEHDKLMPDDVTFIALLCACSHAGLVDEG---- 434
Query: 356 EYIVLNGLESNRQVQTSLIH------MFSKCGRINKAKEVFERVPDKDLAV-WSAMINGY 408
+ +++ Q++ + H + + +++ A E +P K +V W+ ++
Sbjct: 435 -LAMFQAMKNKFQIEPRMEHYGCVVDLLCRARKVDDALAFIENMPIKANSVLWATLLGAC 493
Query: 409 AIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMV--DDGLSFFKSMQSNFGI 466
G D A + + V L+PD+ +LS ++G+ D L K M+ N GI
Sbjct: 494 RSGGHFDLAEKI---GRRVIELEPDSCGRYVMLSNL-YAGVSQWDHALKLRKQMK-NKGI 548
Query: 467 EPS 469
E +
Sbjct: 549 EKT 551
>gi|224096022|ref|XP_002310520.1| predicted protein [Populus trichocarpa]
gi|222853423|gb|EEE90970.1| predicted protein [Populus trichocarpa]
Length = 710
Score = 345 bits (885), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 216/663 (32%), Positives = 327/663 (49%), Gaps = 77/663 (11%)
Query: 29 NSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVL 88
+S F +L C + S D + VH +++ F ++ F+Q LID+Y KC +RKV
Sbjct: 23 DSSPFAKLLDLCVKLRSSRDARSVHGRLIQTPFCEEVFIQNRLIDVYGKCGYLDYARKVF 82
Query: 89 DEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEM------------------------ 124
D M R +V S+NSIIS R DE+ + M
Sbjct: 83 DRMSER--NVFSFNSIISTLMRWGFVDESAWLFSLMPEKDQCSWNSMIAGFAQHDRFEEA 140
Query: 125 --WVLGLE-----LSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMS 173
W + + L+ +F S +S CS + G +H + K + ++ + + ++
Sbjct: 141 LDWFVRMHRDDFVLNDYSFGSGLSACSRLKDLKLGAQIHGLISK-SKYSLDVFMGSGLID 199
Query: 174 MYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVV 233
Y+K G V AR +FD + E ++VSW +I Y G EA +M + PD V
Sbjct: 200 FYSKCGLVGCARRVFDGMEEKNVVSWNCLITCYEQNGPAIEALEAFGRMTELGFKPDEVT 259
Query: 234 FLNLILGCAQVGNLFLALSMHSLLLKSG-YNNEDPLDNLLVSMYTKCGDLELARRVFD-- 290
+++ CA + + +H+ ++KS + N+ L N LV MY KCG + AR VFD
Sbjct: 260 LASVVSACATLAAFKEGVQIHARVVKSDKFRNDLILGNALVDMYAKCGRVNEARCVFDRM 319
Query: 291 -----------------------------AVLEKSVFLWTSMIGGYAQLGYPSEAVNLFK 321
+ +K + W ++I GY Q G EA+ LF+
Sbjct: 320 PVRNAVSETTMVSGYAKSASVKAARSMFATIKQKDIVSWNALIAGYTQNGENEEALGLFR 379
Query: 322 RLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGL------ESNRQVQTSLIH 375
L + SV P T L+A A L L G++ ++V +G E + V SLI
Sbjct: 380 MLKRESVCPTHYTFGNLLNASANLADLELGRQAHSHVVKHGFRFQSGEEPDIFVGNSLID 439
Query: 376 MFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAV 435
M+ KCG + + VFE + +KD W+ MI GYA +G G +AL LF KM G KPD V
Sbjct: 440 MYMKCGSVEEGLRVFENMVEKDHVSWNTMIIGYAQNGYGMEALELFQKMLE-SGEKPDHV 498
Query: 436 VYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHE 495
L ACSH+G+V++G +F SM G+ P +HY C+VDLLGRAG + A I
Sbjct: 499 TMIGTLCACSHAGLVEEGRRYFFSMTKEHGLLPVKDHYTCMVDLLGRAGCLEEAKDLIES 558
Query: 496 MPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEA 555
MP + A VW+ LLSAC H N+ LG+Y A+ + ++P S+G Y+L+AN+++ G W +A
Sbjct: 559 MPKQPDAVVWSSLLSACKVHRNITLGKYVAEKIFEIDPTSSGPYVLLANMYSELGRWGDA 618
Query: 556 ATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKELHIKLLEAGYI 615
+ R LM R + K+PG S ++I +V VF+ D+ H +I LK L + +AGY+
Sbjct: 619 VSVRKLMRRRGVVKQPGCSWIDIQSNVHVFMVKDKRHPQKKEIYSILKLLTKHMRQAGYV 678
Query: 616 AEA 618
+A
Sbjct: 679 PDA 681
Score = 231 bits (588), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 143/454 (31%), Positives = 228/454 (50%), Gaps = 45/454 (9%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI + FEE L + M + N ++F L AC+ + + G ++H + K
Sbjct: 127 MIAGFAQHDRFEEALDWFVRMHRDDFVLNDYSFGSGLSACSRLKDLKLGAQIHGLISKSK 186
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+ D F+ +GLID YSKC +R+V D M ++VVSWN +I+ + + EA+
Sbjct: 187 YSLDVFMGSGLIDFYSKCGLVGCARRVFDGM--EEKNVVSWNCLITCYEQNGPAIEALEA 244
Query: 121 LKEMWVLGLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
M LG + T SVVS C +F++G+ +H V K N++ L N+++ MYA
Sbjct: 245 FGRMTELGFKPDEVTLASVVSACATLAAFKEGVQIHARVVKSDKFRNDLILGNALVDMYA 304
Query: 177 KFGKVNEARSIFDE-------------------------------IGETSIVSWTTIIGG 205
K G+VNEAR +FD I + IVSW +I G
Sbjct: 305 KCGRVNEARCVFDRMPVRNAVSETTMVSGYAKSASVKAARSMFATIKQKDIVSWNALIAG 364
Query: 206 YVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGY--- 262
Y G EA GL ++R SV P F NL+ A + +L L HS ++K G+
Sbjct: 365 YTQNGENEEALGLFRMLKRESVCPTHYTFGNLLNASANLADLELGRQAHSHVVKHGFRFQ 424
Query: 263 NNEDP---LDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNL 319
+ E+P + N L+ MY KCG +E RVF+ ++EK W +MI GYAQ GY EA+ L
Sbjct: 425 SGEEPDIFVGNSLIDMYMKCGSVEEGLRVFENMVEKDHVSWNTMIIGYAQNGYGMEALEL 484
Query: 320 FKRLLKTSVRPNEATLATTLSACAELGSLSKGKE-IEEYIVLNGLESNRQVQTSLIHMFS 378
F+++L++ +P+ T+ TL AC+ G + +G+ +GL + T ++ +
Sbjct: 485 FQKMLESGEKPDHVTMIGTLCACSHAGLVEEGRRYFFSMTKEHGLLPVKDHYTCMVDLLG 544
Query: 379 KCGRINKAKEVFERVPDK-DLAVWSAMINGYAIH 411
+ G + +AK++ E +P + D VWS++++ +H
Sbjct: 545 RAGCLEEAKDLIESMPKQPDAVVWSSLLSACKVH 578
>gi|224061617|ref|XP_002300569.1| predicted protein [Populus trichocarpa]
gi|222847827|gb|EEE85374.1| predicted protein [Populus trichocarpa]
Length = 568
Score = 345 bits (885), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 179/481 (37%), Positives = 286/481 (59%), Gaps = 5/481 (1%)
Query: 139 VVSGC-SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIV 197
VV C G +HC V KLG ++ +A S++ MY++FG V +AR +FD++
Sbjct: 3 VVKACGDLLDGKKIHCLVLKLGF-EWDVFVAASLVHMYSRFGLVGDARKLFDDMPARDRG 61
Query: 198 SWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLL 257
SW +I GY GN EA + ++MR V D + +++ CAQVG++ +H +
Sbjct: 62 SWNAMISGYCQNGNAAEALDIADEMRLEGVKMDAITVASVLPVCAQVGDILSGKLIHLYV 121
Query: 258 LKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAV 317
+K G E + N L++MY K G L A++VF +L K V W ++I GYAQ G SEA+
Sbjct: 122 IKHGLEFELFVSNALINMYAKFGSLGHAQKVF-GLLIKDVVSWNTLITGYAQNGLASEAI 180
Query: 318 NLFKRLLK-TSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHM 376
++ + + + PN+ T + L A + +G+L +G I ++ N L S+ V T LI M
Sbjct: 181 EVYLLMEEHEEIIPNQGTWVSILPAYSHVGALQQGMRIHGQVIKNCLYSDVFVGTCLIDM 240
Query: 377 FSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVV 436
+ KCG+++ A +F +VP K+ W+AMI+ Y +HG G++AL LF +M+ E +KPD +
Sbjct: 241 YGKCGKLDDAISLFYQVPRKNSVPWNAMISCYGVHGDGEKALELFREMK-AERVKPDHIT 299
Query: 437 YTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEM 496
+ S+LSACSHSG+V D F M+ +GI+PS++HY C+VDL GRAG ++A I +M
Sbjct: 300 FVSLLSACSHSGLVSDAQWCFNMMEEEYGIKPSLKHYGCMVDLFGRAGELEMAFNFIKKM 359
Query: 497 PVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAA 556
P++ A W LL+AC H N+ELG++A++ L ++ + G Y+L++N++ + G W+
Sbjct: 360 PIQPDASAWGALLNACRIHGNIELGKHASERLFEVDSENVGYYVLLSNIYANVGKWEGVD 419
Query: 557 TARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKELHIKLLEAGYIA 616
R L DR L K PGWS + ++ V VF G+++H +I + L++L K+ GY+
Sbjct: 420 DVRSLARDRGLRKNPGWSSIILNNKVDVFYTGNQTHPKCEEIYRELRDLTSKIKTIGYVP 479
Query: 617 E 617
+
Sbjct: 480 D 480
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 120/391 (30%), Positives = 204/391 (52%), Gaps = 24/391 (6%)
Query: 34 PLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPV 93
P V+KAC ++ DGK++H VLK+GF+ D FV L+ MYS+ +RK+ D+MP
Sbjct: 1 PPVVKACGDL---LDGKKIHCLVLKLGFEWDVFVAASLVHMYSRFGLVGDARKLFDDMPA 57
Query: 94 RLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCS----FRQGI 149
R R SWN++IS + + EA+ + EM + G+++ A T SV+ C+ G
Sbjct: 58 RDRG--SWNAMISGYCQNGNAAEALDIADEMRLEGVKMDAITVASVLPVCAQVGDILSGK 115
Query: 150 SMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNV 209
+H V K G L E+ ++N++++MYAKFG + A+ +F + + +VSW T+I GY
Sbjct: 116 LIHLYVIKHG-LEFELFVSNALINMYAKFGSLGHAQKVFGLLIK-DVVSWNTLITGYAQN 173
Query: 210 GNVNEAFGLCNQMRRM-SVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPL 268
G +EA + M + P+ +++++ + VG L + +H ++K+ ++ +
Sbjct: 174 GLASEAIEVYLLMEEHEEIIPNQGTWVSILPAYSHVGALQQGMRIHGQVIKNCLYSDVFV 233
Query: 269 DNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSV 328
L+ MY KCG L+ A +F V K+ W +MI Y G +A+ LF+ + V
Sbjct: 234 GTCLIDMYGKCGKLDDAISLFYQVPRKNSVPWNAMISCYGVHGDGEKALELFREMKAERV 293
Query: 329 RPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIH------MFSKCGR 382
+P+ T + LSAC+ G +S + N +E ++ SL H +F + G
Sbjct: 294 KPDHITFVSLLSACSHSGLVSDAQ-----WCFNMMEEEYGIKPSLKHYGCMVDLFGRAGE 348
Query: 383 INKAKEVFERVP-DKDLAVWSAMINGYAIHG 412
+ A +++P D + W A++N IHG
Sbjct: 349 LEMAFNFIKKMPIQPDASAWGALLNACRIHG 379
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 104/419 (24%), Positives = 190/419 (45%), Gaps = 58/419 (13%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI NG+ E L M GV ++ T VL CA + I GK +H +V+K G
Sbjct: 66 MISGYCQNGNAAEALDIADEMRLEGVKMDAITVASVLPVCAQVGDILSGKLIHLYVIKHG 125
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+ + FV LI+MY+K ++KV + ++ VVSWN++I+ +++ L EAI
Sbjct: 126 LEFELFVSNALINMYAKFGSLGHAQKVFGLL---IKDVVSWNTLITGYAQNGLASEAI-- 180
Query: 121 LKEMWVLGLE-----LSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSV 171
E+++L E + T+VS++ S +QG+ +H V K L +++ + +
Sbjct: 181 --EVYLLMEEHEEIIPNQGTWVSILPAYSHVGALQQGMRIHGQVIK-NCLYSDVFVGTCL 237
Query: 172 MSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDL 231
+ MY K GK+++A S+F ++ + V W +I Y G+ +A L +M+ V PD
Sbjct: 238 IDMYGKCGKLDDAISLFYQVPRKNSVPWNAMISCYGVHGDGEKALELFREMKAERVKPDH 297
Query: 232 VVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNL--LVSMYTKCGDLELARRVF 289
+ F++L+ C+ G + A + +++ Y + L + +V ++ + G+LE+A
Sbjct: 298 ITFVSLLSACSHSGLVSDAQWCFN-MMEEEYGIKPSLKHYGCMVDLFGRAGELEMA---- 352
Query: 290 DAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLS 349
F + K ++P+ + L+AC G++
Sbjct: 353 ------------------------------FNFIKKMPIQPDASAWGALLNACRIHGNIE 382
Query: 350 KGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDL---AVWSAMI 405
GK E + E N L ++++ G+ +V D+ L WS++I
Sbjct: 383 LGKHASERLFEVDSE-NVGYYVLLSNIYANVGKWEGVDDVRSLARDRGLRKNPGWSSII 440
>gi|225469326|ref|XP_002268072.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g38010-like [Vitis vinifera]
Length = 590
Score = 345 bits (885), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 192/572 (33%), Positives = 316/572 (55%), Gaps = 15/572 (2%)
Query: 40 CANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVS-SRKVLDEMPVRLRSV 98
C I S+ K++H+H++ G D FV + + + + K FV + L++ + +
Sbjct: 15 CKTIRSL---KQIHAHLIASGLLHDEFVLSKVSEFFGKHIGFVDYAFDFLNQTDLHV-GT 70
Query: 99 VSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCC 154
+ +N++I+A++ +C A LV + G TF V+ C+ ++G +H
Sbjct: 71 LPYNTLIAAYASSCTPKAAFLVYGRIVGNGFVPDMYTFPVVLKACTKFLGVQEGEQVHGV 130
Query: 155 VYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNE 214
K+G L ++ + NS++ Y+ GK A +FDE+ +VSWT +I GYV G +E
Sbjct: 131 AVKMGFLC-DLYVQNSLLHFYSVCGKWGGAGRVFDEMLVRDVVSWTGLISGYVRTGLFDE 189
Query: 215 AFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVS 274
A N +M V P++ F+++++ C ++G L + +H L+ K + + N LV
Sbjct: 190 AI---NLFLKMDVVPNVATFVSVLVACGRMGYLSMGKGVHGLVYKRAFGIGLVVGNALVD 246
Query: 275 MYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEAT 334
MY KC L AR++FD + ++ + WTS+I G Q P +++ LF + + V P+
Sbjct: 247 MYVKCECLCEARKLFDELPDRDIVSWTSIISGLVQCKQPKDSLELFYDMQISGVEPDRII 306
Query: 335 LATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVP 394
L + LSACA LG+L G+ ++EYI G+E + + T+L+ M++KCG I A +F +P
Sbjct: 307 LTSVLSACASLGALDYGRWVQEYIERQGIEWDIHIGTALVDMYAKCGCIEMALHIFNGIP 366
Query: 395 DKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGL 454
++++ W+A++ G A+HG G +AL F M G++P+ V + +IL+AC HSG+V +G
Sbjct: 367 NRNIFTWNALLGGLAMHGHGHEALKHFELMIGA-GIRPNEVTFLAILTACCHSGLVAEGR 425
Query: 455 SFFKSMQSN-FGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACM 513
S+F M S F P +EHY C++DLL RAG D A K I MP+ +W LLSAC
Sbjct: 426 SYFYQMISQPFNFSPRLEHYGCMIDLLCRAGLLDEAYKFIRNMPLPPDVLIWGALLSACK 485
Query: 514 KHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGW 573
+ NVEL + +LL L +G Y+L++N++ + W + R LM D+ + K PG
Sbjct: 486 ANGNVELSQEILSHLLELKSQDSGVYVLLSNIYATNERWDDVTRVRRLMKDKGIRKFPGS 545
Query: 574 SQVEIDGSVQVFVAGDRSHHLSVDIRKTLKEL 605
S +E+DG F+ GD +H + DI L L
Sbjct: 546 SVIEVDGEAHEFLVGDTNHSRNEDIHILLNIL 577
Score = 206 bits (524), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 122/407 (29%), Positives = 214/407 (52%), Gaps = 21/407 (5%)
Query: 17 TYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYS 76
Y ++ G + +TFP+VLKAC + +G++VH +K+GF D +VQ L+ YS
Sbjct: 92 VYGRIVGNGFVPDMYTFPVVLKACTKFLGVQEGEQVHGVAVKMGFLCDLYVQNSLLHFYS 151
Query: 77 KCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTF 136
C + + +V DEM V R VVSW +IS + R L DEAI + +M V+ + +TF
Sbjct: 152 VCGKWGGAGRVFDEMLV--RDVVSWTGLISGYVRTGLFDEAINLFLKMDVVP---NVATF 206
Query: 137 VSVVSGCS----FRQGISMHCCVYK----LGLLNNEIPLANSVMSMYAKFGKVNEARSIF 188
VSV+ C G +H VYK +GL+ + N+++ MY K + EAR +F
Sbjct: 207 VSVLVACGRMGYLSMGKGVHGLVYKRAFGIGLV-----VGNALVDMYVKCECLCEARKLF 261
Query: 189 DEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLF 248
DE+ + IVSWT+II G V ++ L M+ V PD ++ +++ CA +G L
Sbjct: 262 DELPDRDIVSWTSIISGLVQCKQPKDSLELFYDMQISGVEPDRIILTSVLSACASLGALD 321
Query: 249 LALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYA 308
+ + + G + + LV MY KCG +E+A +F+ + +++F W +++GG A
Sbjct: 322 YGRWVQEYIERQGIEWDIHIGTALVDMYAKCGCIEMALHIFNGIPNRNIFTWNALLGGLA 381
Query: 309 QLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQ 368
G+ EA+ F+ ++ +RPNE T L+AC G +++G+ ++ + +
Sbjct: 382 MHGHGHEALKHFELMIGAGIRPNEVTFLAILTACCHSGLVAEGRSYFYQMISQPFNFSPR 441
Query: 369 VQ--TSLIHMFSKCGRINKAKEVFERVP-DKDLAVWSAMINGYAIHG 412
++ +I + + G +++A + +P D+ +W A+++ +G
Sbjct: 442 LEHYGCMIDLLCRAGLLDEAYKFIRNMPLPPDVLIWGALLSACKANG 488
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/254 (20%), Positives = 110/254 (43%), Gaps = 43/254 (16%)
Query: 12 EETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGL 71
+++L + M +GV + VL ACA++ ++ G+ V ++ + G + D + T L
Sbjct: 286 KDSLELFYDMQISGVEPDRIILTSVLSACASLGALDYGRWVQEYIERQGIEWDIHIGTAL 345
Query: 72 IDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLEL 131
+DMY+KC + + + +P R++ +WN+++ + EA+ + M G+
Sbjct: 346 VDMYAKCGCIEMALHIFNGIPN--RNIFTWNALLGGLAMHGHGHEALKHFELMIGAGIRP 403
Query: 132 SASTFVSVVSGCSFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEI 191
+ TF+++++ C G V E RS F ++
Sbjct: 404 NEVTFLAILTACCHS--------------------------------GLVAEGRSYFYQM 431
Query: 192 ------GETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVG 245
+ + +I G ++EA+ +R M + PD++++ L+ C G
Sbjct: 432 ISQPFNFSPRLEHYGCMIDLLCRAGLLDEAYKF---IRNMPLPPDVLIWGALLSACKANG 488
Query: 246 NLFLALSMHSLLLK 259
N+ L+ + S LL+
Sbjct: 489 NVELSQEILSHLLE 502
>gi|224092360|ref|XP_002309575.1| predicted protein [Populus trichocarpa]
gi|222855551|gb|EEE93098.1| predicted protein [Populus trichocarpa]
Length = 653
Score = 345 bits (885), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 190/564 (33%), Positives = 315/564 (55%), Gaps = 11/564 (1%)
Query: 59 VGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAI 118
+GF D + LI MY KC + V D M R +VVSW +++ H + E++
Sbjct: 1 MGFGFDLMLSNDLIVMYGKCGRLGVACDVFDRMLKR--NVVSWTALMCGHIQNGNPLESL 58
Query: 119 LVLKEMWVLGLELSASTFVSVVSGCSFRQGI----SMHCCVYKLGLLNNEIPLANSVMSM 174
L+ +M + G++ + TF + + C G+ +H K G + + NS++ M
Sbjct: 59 LLFSKMGLSGVKPNDFTFSTNLKACGLLNGLDIGRQIHDICVKTGFDMVNV-VGNSIIDM 117
Query: 175 YAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVF 234
Y+K G++NEA +F+ + +++SW +I GY G +A L +M+ + D F
Sbjct: 118 YSKCGRINEAACMFEVMPVRNLISWNAMIAGYTVAGFCEKALVLFQKMQEVGGFLDEFTF 177
Query: 235 LNLILGCAQVGNLFLALSMHSLLLKSG--YNNEDPLDNLLVSMYTKCGDLELARRVFDAV 292
+ + C+ +G + +H+ L+ G Y+ + L+ +Y KCG L +ARRVF +
Sbjct: 178 TSTLKACSDLGAIKEGNQIHAFLITGGFLYSVNTAVAGALIDLYVKCGKLFMARRVFSHI 237
Query: 293 LEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGK 352
EK V WT++I GYAQ G +E++ LF++L ++S++ + L++ + A+ + +GK
Sbjct: 238 EEKHVISWTALILGYAQEGNLAESMELFRQLRESSIQVDGFILSSMMGVFADFALVQQGK 297
Query: 353 EIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHG 412
++ + + + V S++ M+ KCG IN+A+ +F +P +++ W+ MI GY HG
Sbjct: 298 QMHAFAIKVPSGVDISVCNSILDMYLKCGMINEAERLFSEMPARNVISWTVMITGYGKHG 357
Query: 413 MGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEH 472
+G +A+ LF +MQ ++ +PD V Y ++L CSHSG+V+ G +F + S GI+ +EH
Sbjct: 358 LGKEAIRLFDEMQ-LDSTEPDDVTYLAVLLGCSHSGLVEKGQEYFSRLCSYHGIKARVEH 416
Query: 473 YLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLN 532
Y C+VDLLGRAGR A + MP+E +W LLSAC H ++ELG+ LL L+
Sbjct: 417 YACMVDLLGRAGRLKEAKNLVDSMPLEANVGIWQTLLSACRVHGDLELGKEVGGILLRLD 476
Query: 533 PGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSH 592
+ NY++M+N++ AG WKE R L+ ++L KE G S VEID V F GD +H
Sbjct: 477 SENPVNYVMMSNIYADAGYWKECERIRELVKSKKLKKEAGRSWVEIDKEVHFFYGGDDTH 536
Query: 593 HLSVDIRKTLKELHIKLLEA-GYI 615
L+ I + LKE+ ++ E GY+
Sbjct: 537 PLTEKIHEILKEMERRMKEELGYV 560
Score = 203 bits (516), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 119/413 (28%), Positives = 215/413 (52%), Gaps = 9/413 (2%)
Query: 7 NNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAF 66
NG+ E+L +S M +GV N FTF LKAC +N + G+++H +K GF
Sbjct: 50 QNGNPLESLLLFSKMGLSGVKPNDFTFSTNLKACGLLNGLDIGRQIHDICVKTGFDMVNV 109
Query: 67 VQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWV 126
V +IDMYSKC + + + MPV R+++SWN++I+ ++ A ++A+++ ++M
Sbjct: 110 VGNSIIDMYSKCGRINEAACMFEVMPV--RNLISWNAMIAGYTVAGFCEKALVLFQKMQE 167
Query: 127 LGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNN-EIPLANSVMSMYAKFGKV 181
+G L TF S + CS ++G +H + G L + +A +++ +Y K GK+
Sbjct: 168 VGGFLDEFTFTSTLKACSDLGAIKEGNQIHAFLITGGFLYSVNTAVAGALIDLYVKCGKL 227
Query: 182 NEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGC 241
AR +F I E ++SWT +I GY GN+ E+ L Q+R S+ D + +++
Sbjct: 228 FMARRVFSHIEEKHVISWTALILGYAQEGNLAESMELFRQLRESSIQVDGFILSSMMGVF 287
Query: 242 AQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWT 301
A + MH+ +K + + N ++ MY KCG + A R+F + ++V WT
Sbjct: 288 ADFALVQQGKQMHAFAIKVPSGVDISVCNSILDMYLKCGMINEAERLFSEMPARNVISWT 347
Query: 302 SMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKE-IEEYIVL 360
MI GY + G EA+ LF + S P++ T L C+ G + KG+E
Sbjct: 348 VMITGYGKHGLGKEAIRLFDEMQLDSTEPDDVTYLAVLLGCSHSGLVEKGQEYFSRLCSY 407
Query: 361 NGLESNRQVQTSLIHMFSKCGRINKAKEVFERVP-DKDLAVWSAMINGYAIHG 412
+G+++ + ++ + + GR+ +AK + + +P + ++ +W +++ +HG
Sbjct: 408 HGIKARVEHYACMVDLLGRAGRLKEAKNLVDSMPLEANVGIWQTLLSACRVHG 460
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 98/388 (25%), Positives = 186/388 (47%), Gaps = 23/388 (5%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI T G E+ L + M + G + FTF LKAC+++ +I +G ++H+ ++ G
Sbjct: 145 MIAGYTVAGFCEKALVLFQKMQEVGGFLDEFTFTSTLKACSDLGAIKEGNQIHAFLITGG 204
Query: 61 F--QQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAI 118
F + V LID+Y KC +R+V + + V+SW ++I +++ E++
Sbjct: 205 FLYSVNTAVAGALIDLYVKCGKLFMARRVFSH--IEEKHVISWTALILGYAQEGNLAESM 262
Query: 119 LVLKEMWVLGLELSA---STFVSVVSGCSF-RQGISMHCCVYKLGLLNNEIPLANSVMSM 174
+ +++ +++ S+ + V + + +QG MH K+ +I + NS++ M
Sbjct: 263 ELFRQLRESSIQVDGFILSSMMGVFADFALVQQGKQMHAFAIKVP-SGVDISVCNSILDM 321
Query: 175 YAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVF 234
Y K G +NEA +F E+ +++SWT +I GY G EA L ++M+ S PD V +
Sbjct: 322 YLKCGMINEAERLFSEMPARNVISWTVMITGYGKHGLGKEAIRLFDEMQLDSTEPDDVTY 381
Query: 235 LNLILGCAQVGNLFLALSMHSLLLK-SGYNNEDPLDNLLVSMYTKCGDLELARRVFDAV- 292
L ++LGC+ G + S L G +V + + G L+ A+ + D++
Sbjct: 382 LAVLLGCSHSGLVEKGQEYFSRLCSYHGIKARVEHYACMVDLLGRAGRLKEAKNLVDSMP 441
Query: 293 LEKSVFLWTSMIGG---YAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSA-------C 342
LE +V +W +++ + L E + RL S P + + + A C
Sbjct: 442 LEANVGIWQTLLSACRVHGDLELGKEVGGILLRL--DSENPVNYVMMSNIYADAGYWKEC 499
Query: 343 AELGSLSKGKEIEEYIVLNGLESNRQVQ 370
+ L K K++++ + +E +++V
Sbjct: 500 ERIRELVKSKKLKKEAGRSWVEIDKEVH 527
>gi|38606535|emb|CAE06013.3| OSJNBa0016O02.23 [Oryza sativa Japonica Group]
gi|116310014|emb|CAH67039.1| OSIGBa0124N08.1 [Oryza sativa Indica Group]
gi|116310420|emb|CAH67428.1| OSIGBa0150F01.8 [Oryza sativa Indica Group]
Length = 939
Score = 345 bits (885), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 209/621 (33%), Positives = 329/621 (52%), Gaps = 12/621 (1%)
Query: 2 IRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGF 61
I NG F E L + M G NS+T VL+ CA + + G+ +H+ +LK G
Sbjct: 237 ISGCVQNGMFLEALDLFRRMQSDGFSMNSYTTVGVLQVCAELAQLNHGRELHAALLKCGT 296
Query: 62 QQDAFVQ-TGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+ + +Q L+ MY++C S+ +V E + + +SWNS++S + + L EAI
Sbjct: 297 EFN--IQCNALLVMYARCGWVDSALRVFRE--IGDKDYISWNSMLSCYVQNRLYAEAIDF 352
Query: 121 LKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
EM G + VS++S G +H K L++++ +AN++M MY
Sbjct: 353 FGEMVQNGFNPDHACIVSLLSAVGHLGRLINGREVHAYAVKQ-RLDSDLQIANTLMDMYI 411
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K V + +FD + VSWTTII Y +EA G ++ + D ++ +
Sbjct: 412 KCYSVECSARVFDRMRIKDHVSWTTIIACYAQSSRYSEAIGKFRTAQKEGIKVDPMMMGS 471
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
++ C+ + ++ L +HS +++G + L N ++ +Y +CG++ A +F+ + +K
Sbjct: 472 ILEACSGLKSISLLKQVHSYAIRNGLLDL-ILKNRIIDIYGECGEVCYALNIFEMLDKKD 530
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEE 356
+ WTSM+ +A+ G EAV LF ++L ++P+ L L A A L SL+KGKEI
Sbjct: 531 IVTWTSMVNCFAENGLLHEAVALFGKMLNAGIQPDSVALVGILGAIAGLSSLTKGKEIHG 590
Query: 357 YIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQ 416
+++ V +SL+ M+S CG +N A +VF+ KD+ +W+AMIN +HG G Q
Sbjct: 591 FLIRGKFPVEGAVVSSLVDMYSGCGSMNYALKVFDEAKCKDVVLWTAMINATGMHGHGKQ 650
Query: 417 ALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCL 476
A+ +F +M G+ PD V + ++L ACSHS +VD+G + M S + ++P EHY C+
Sbjct: 651 AIYIFKRMLET-GVSPDHVSFLALLYACSHSKLVDEGKFYLDMMVSKYKLQPWQEHYACV 709
Query: 477 VDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGST 536
VDLLGR+G+ + A K I MP+E ++ VW LL AC H N EL A LL L P +
Sbjct: 710 VDLLGRSGQTEEAYKFIKSMPLEPKSVVWCALLGACRIHKNHELAMIATDKLLELEPDNP 769
Query: 537 GNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSV 596
GNY+L++N+F G W R M ++ L K+P S +EI +V F A D SH S
Sbjct: 770 GNYVLVSNVFAEMGKWNNVKEIRTKMTEQGLRKDPACSWIEIGNTVHTFTARDHSHRDSQ 829
Query: 597 DIRKTLKELHIKLLEAGYIAE 617
I L E+ KL G E
Sbjct: 830 AIHLKLAEITEKLRREGQYVE 850
Score = 204 bits (520), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 148/538 (27%), Positives = 256/538 (47%), Gaps = 17/538 (3%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQT----GVHGNSFTFPLVLKACANINSIWDGKRVHSHV 56
+I ++G E + Y +M + G + T VLKAC G VH
Sbjct: 130 LIGACLSSGGAGEAVGVYRAMRASEPVAGAAPDGCTLASVLKACGAEGDGRCGSEVHGLA 189
Query: 57 LKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDE 116
+K G + V L+ MY+KC S+ +V + M R V SWNS IS + + E
Sbjct: 190 VKSGLDRSTLVANALVGMYAKCGLLDSALRVFEWMR-DGRDVASWNSAISGCVQNGMFLE 248
Query: 117 AILVLKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVM 172
A+ + + M G +++ T V V+ C+ G +H + K G N N+++
Sbjct: 249 ALDLFRRMQSDGFSMNSYTTVGVLQVCAELAQLNHGRELHAALLKCGTEFN--IQCNALL 306
Query: 173 SMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLV 232
MYA+ G V+ A +F EIG+ +SW +++ YV EA +M + PD
Sbjct: 307 VMYARCGWVDSALRVFREIGDKDYISWNSMLSCYVQNRLYAEAIDFFGEMVQNGFNPDHA 366
Query: 233 VFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAV 292
++L+ +G L +H+ +K +++ + N L+ MY KC +E + RVFD +
Sbjct: 367 CIVSLLSAVGHLGRLINGREVHAYAVKQRLDSDLQIANTLMDMYIKCYSVECSARVFDRM 426
Query: 293 LEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGK 352
K WT++I YAQ SEA+ F+ K ++ + + + L AC+ L S+S K
Sbjct: 427 RIKDHVSWTTIIACYAQSSRYSEAIGKFRTAQKEGIKVDPMMMGSILEACSGLKSISLLK 486
Query: 353 EIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHG 412
++ Y + NGL + ++ +I ++ +CG + A +FE + KD+ W++M+N +A +G
Sbjct: 487 QVHSYAIRNGL-LDLILKNRIIDIYGECGEVCYALNIFEMLDKKDIVTWTSMVNCFAENG 545
Query: 413 MGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSM-QSNFGIEPSIE 471
+ +A+ LF KM + G++PD+V IL A + + G + + F +E ++
Sbjct: 546 LLHEAVALFGKMLNA-GIQPDSVALVGILGAIAGLSSLTKGKEIHGFLIRGKFPVEGAV- 603
Query: 472 HYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLL 529
LVD+ G + ALK E + +W +++A H + + Y K +L
Sbjct: 604 -VSSLVDMYSGCGSMNYALKVFDEAKCK-DVVLWTAMINATGMHGHGKQAIYIFKRML 659
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 148/525 (28%), Positives = 247/525 (47%), Gaps = 27/525 (5%)
Query: 2 IRNSTNNGSFEETLSTYSSMLQTG-VHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+R +G E L ++ G + + VL A ++ +G+++H+H + G
Sbjct: 26 LRQLCKDGDLREALRQLAARSARGRAPPPTDHYGWVLDLVAVRRAVSEGRQLHAHAVATG 85
Query: 61 FQQD---AFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEA 117
D F+ T L+ MY KC + ++ D MP R+V SWN++I A + EA
Sbjct: 86 ALGDDDAGFLATKLLFMYGKCGRLPDAHRLFDGMPA--RTVFSWNALIGACLSSGGAGEA 143
Query: 118 ILVLKEMW----VLGLELSASTFVSVVSGCSF----RQGISMHCCVYKLGLLNNEIPLAN 169
+ V + M V G T SV+ C R G +H K G L+ +AN
Sbjct: 144 VGVYRAMRASEPVAGAAPDGCTLASVLKACGAEGDGRCGSEVHGLAVKSG-LDRSTLVAN 202
Query: 170 SVMSMYAKFGKVNEARSIFDEIGE-TSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVT 228
+++ MYAK G ++ A +F+ + + + SW + I G V G EA L +M+ +
Sbjct: 203 ALVGMYAKCGLLDSALRVFEWMRDGRDVASWNSAISGCVQNGMFLEALDLFRRMQSDGFS 262
Query: 229 PDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRV 288
+ + ++ CA++ L +H+ LLK G + LLV MY +CG ++ A RV
Sbjct: 263 MNSYTTVGVLQVCAELAQLNHGRELHAALLKCGTEFNIQCNALLV-MYARCGWVDSALRV 321
Query: 289 FDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSL 348
F + +K W SM+ Y Q +EA++ F +++ P+ A + + LSA LG L
Sbjct: 322 FREIGDKDYISWNSMLSCYVQNRLYAEAIDFFGEMVQNGFNPDHACIVSLLSAVGHLGRL 381
Query: 349 SKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGY 408
G+E+ Y V L+S+ Q+ +L+ M+ KC + + VF+R+ KD W+ +I Y
Sbjct: 382 INGREVHAYAVKQRLDSDLQIANTLMDMYIKCYSVECSARVFDRMRIKDHVSWTTIIACY 441
Query: 409 AIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEP 468
A +A+ F Q EG+K D ++ SIL AC SG+ +S K + S + I
Sbjct: 442 AQSSRYSEAIGKFRTAQK-EGIKVDPMMMGSILEAC--SGL--KSISLLKQVHS-YAIRN 495
Query: 469 SIEHYLC---LVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLS 510
+ + ++D+ G G AL I EM + W +++
Sbjct: 496 GLLDLILKNRIIDIYGECGEVCYAL-NIFEMLDKKDIVTWTSMVN 539
Score = 174 bits (442), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 112/443 (25%), Positives = 216/443 (48%), Gaps = 6/443 (1%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
M+ N + E + + M+Q G + + +L A ++ + +G+ VH++ +K
Sbjct: 336 MLSCYVQNRLYAEAIDFFGEMVQNGFNPDHACIVSLLSAVGHLGRLINGREVHAYAVKQR 395
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
D + L+DMY KC S +V D M R++ VSW +II+ ++++ EAI
Sbjct: 396 LDSDLQIANTLMDMYIKCYSVECSARVFDRM--RIKDHVSWTTIIACYAQSSRYSEAIGK 453
Query: 121 LKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGLLNN--EIPLANSVMSMYAKF 178
+ G+++ S++ CS + IS+ V+ + N ++ L N ++ +Y +
Sbjct: 454 FRTAQKEGIKVDPMMMGSILEACSGLKSISLLKQVHSYAIRNGLLDLILKNRIIDIYGEC 513
Query: 179 GKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLI 238
G+V A +IF+ + + IV+WT+++ + G ++EA L +M + PD V + ++
Sbjct: 514 GEVCYALNIFEMLDKKDIVTWTSMVNCFAENGLLHEAVALFGKMLNAGIQPDSVALVGIL 573
Query: 239 LGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVF 298
A + +L +H L++ + E + + LV MY+ CG + A +VFD K V
Sbjct: 574 GAIAGLSSLTKGKEIHGFLIRGKFPVEGAVVSSLVDMYSGCGSMNYALKVFDEAKCKDVV 633
Query: 299 LWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYI 358
LWT+MI G+ +A+ +FKR+L+T V P+ + L AC+ + +GK + +
Sbjct: 634 LWTAMINATGMHGHGKQAIYIFKRMLETGVSPDHVSFLALLYACSHSKLVDEGKFYLDMM 693
Query: 359 VLN-GLESNRQVQTSLIHMFSKCGRINKAKEVFERVP-DKDLAVWSAMINGYAIHGMGDQ 416
V L+ ++ ++ + + G+ +A + + +P + VW A++ IH +
Sbjct: 694 VSKYKLQPWQEHYACVVDLLGRSGQTEEAYKFIKSMPLEPKSVVWCALLGACRIHKNHEL 753
Query: 417 ALNLFYKMQHVEGLKPDAVVYTS 439
A+ K+ +E P V S
Sbjct: 754 AMIATDKLLELEPDNPGNYVLVS 776
>gi|242090705|ref|XP_002441185.1| hypothetical protein SORBIDRAFT_09g021880 [Sorghum bicolor]
gi|241946470|gb|EES19615.1| hypothetical protein SORBIDRAFT_09g021880 [Sorghum bicolor]
Length = 878
Score = 345 bits (884), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 200/617 (32%), Positives = 341/617 (55%), Gaps = 14/617 (2%)
Query: 7 NNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAF 66
+G+ + + + M GV NS TF VL A+ + G+RVH+ +K G F
Sbjct: 182 QDGALSDVMELFFRMRAEGVWPNSVTFASVLSVVASQGMVDLGRRVHAQSVKFGCCSTVF 241
Query: 67 VQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWV 126
V L++MY+KC +R V M R +VSWN++++ + EA+ + +
Sbjct: 242 VCNSLMNMYAKCGLVEEARVVFCGMETR--DMVSWNTLMAGLVLNGHDLEALQLFHDSRS 299
Query: 127 LGLELSASTFVSVVSGCS-FRQ-GIS--MHCCVYKLGLLNNEIPLANSVMSMYAKFGKVN 182
L+ ST+ +V+ C+ +Q G++ +H V K G ++ + ++M Y+K G++
Sbjct: 300 SITMLTQSTYATVIKLCANIKQLGLARQLHSSVLKRGF-HSYGNVMTALMDAYSKAGQLG 358
Query: 183 EARSIFDEI-GETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGC 241
A IF + G ++VSWT +I G + G+V A L ++MR V P+ + ++
Sbjct: 359 NALDIFLLMSGSQNVVSWTAMINGCIQNGDVPLAAALFSRMREDGVAPNDFTYSTILT-- 416
Query: 242 AQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWT 301
A V +L +H+ ++K+ Y + L++ Y+K + E A +F + +K V W+
Sbjct: 417 ASVASL--PPQIHAQVIKTNYECTSIVGTALLASYSKLCNTEEALSIFKMIDQKDVVSWS 474
Query: 302 SMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAE-LGSLSKGKEIEEYIVL 360
+M+ YAQ G A N+F ++ ++PNE T+++ + ACA + G++ +
Sbjct: 475 AMLTCYAQAGDSDGATNIFIKMTMHGLKPNEFTISSVIDACASPTAGVDLGRQFHAISIK 534
Query: 361 NGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNL 420
+ V ++L+ M+++ G I A+ +FER D+DL W++M++GYA HG +AL++
Sbjct: 535 HRCHDALCVSSALVSMYARKGSIESAQCIFERQTDRDLVSWNSMLSGYAQHGYSQKALDV 594
Query: 421 FYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLL 480
F +M+ EG++ D V + S++ C+H+G+V++G +F SM ++GI P++EHY C+VDL
Sbjct: 595 FRQME-AEGIEMDGVTFLSVIMGCAHAGLVEEGQRYFDSMARDYGITPTMEHYACMVDLY 653
Query: 481 GRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYI 540
RAG+ D A+ I M VW LL AC H NVELG+ AA+ LL+L P + Y+
Sbjct: 654 SRAGKLDEAMSLIEGMSFPAGPMVWRTLLGACKVHKNVELGKLAAEKLLSLEPFDSATYV 713
Query: 541 LMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRK 600
L++N++++AG WKE R LMD +++ KE G S ++I V F+A D+SH LS I
Sbjct: 714 LLSNIYSAAGKWKEKDEVRKLMDTKKVKKEAGCSWIQIKNKVHSFIASDKSHPLSEQIYA 773
Query: 601 TLKELHIKLLEAGYIAE 617
L+ + KL + GY +
Sbjct: 774 KLRAMTTKLKQEGYCPD 790
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 151/491 (30%), Positives = 237/491 (48%), Gaps = 25/491 (5%)
Query: 36 VLKACANINSIWDGKRVHSHVLKVGFQQ-DAFVQTGLIDMYSKCSDFVSSRKVLDEMPVR 94
VLK C ++ GK++H ++ G + D V T L+DMY K V RKV + MP
Sbjct: 109 VLKVCGSVPDRVLGKQLHGLCIRCGHDRGDVGVGTSLVDMYMKWHSVVDGRKVFEAMPK- 167
Query: 95 LRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCSFRQ----GIS 150
R+VV+W S+++ + + + + + M G+ ++ TF SV+S + + G
Sbjct: 168 -RNVVTWTSLLTGYIQDGALSDVMELFFRMRAEGVWPNSVTFASVLSVVASQGMVDLGRR 226
Query: 151 MHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVG 210
+H K G + + + NS+M+MYAK G V EAR +F + +VSW T++ G V G
Sbjct: 227 VHAQSVKFGCCST-VFVCNSLMNMYAKCGLVEEARVVFCGMETRDMVSWNTLMAGLVLNG 285
Query: 211 NVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDN 270
+ EA L + R + +I CA + L LA +HS +LK G+++ +
Sbjct: 286 HDLEALQLFHDSRSSITMLTQSTYATVIKLCANIKQLGLARQLHSSVLKRGFHSYGNVMT 345
Query: 271 LLVSMYTKCGDLELARRVFDAVL-EKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVR 329
L+ Y+K G L A +F + ++V WT+MI G Q G A LF R+ + V
Sbjct: 346 ALMDAYSKAGQLGNALDIFLLMSGSQNVVSWTAMINGCIQNGDVPLAAALFSRMREDGVA 405
Query: 330 PNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEV 389
PN+ T +T L+ A + SL +I ++ E V T+L+ +SK +A +
Sbjct: 406 PNDFTYSTILT--ASVASLP--PQIHAQVIKTNYECTSIVGTALLASYSKLCNTEEALSI 461
Query: 390 FERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSAC-SHSG 448
F+ + KD+ WSAM+ YA G D A N+F KM + GLKP+ +S++ AC S +
Sbjct: 462 FKMIDQKDVVSWSAMLTCYAQAGDSDGATNIFIKMT-MHGLKPNEFTISSVIDACASPTA 520
Query: 449 MVDDGLSFFKSMQSNFGIEPSIEHYLC----LVDLLGRAGRFDLALKTIHEMPVEVQAQV 504
VD G F I+ LC LV + R G + A + I E +
Sbjct: 521 GVDLGRQFHA-----ISIKHRCHDALCVSSALVSMYARKGSIESA-QCIFERQTDRDLVS 574
Query: 505 WAPLLSACMKH 515
W +LS +H
Sbjct: 575 WNSMLSGYAQH 585
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/316 (24%), Positives = 162/316 (51%), Gaps = 20/316 (6%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI NG + +S M + GV N FT+ +L A++ S+ ++H+ V+K
Sbjct: 379 MINGCIQNGDVPLAAALFSRMREDGVAPNDFTYSTILT--ASVASL--PPQIHAQVIKTN 434
Query: 61 FQQDAFVQTGLIDMYSK-CS--DFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEA 117
++ + V T L+ YSK C+ + +S K++D+ + VVSW+++++ +++A +D A
Sbjct: 435 YECTSIVGTALLASYSKLCNTEEALSIFKMIDQ-----KDVVSWSAMLTCYAQAGDSDGA 489
Query: 118 ILVLKEMWVLGLELSASTFVSVVSGC-SFRQGISMHCCVYKLGL---LNNEIPLANSVMS 173
+ +M + GL+ + T SV+ C S G+ + + + + ++ + ++++++S
Sbjct: 490 TNIFIKMTMHGLKPNEFTISSVIDACASPTAGVDLGRQFHAISIKHRCHDALCVSSALVS 549
Query: 174 MYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVV 233
MYA+ G + A+ IF+ + +VSW +++ GY G +A + QM + D V
Sbjct: 550 MYARKGSIESAQCIFERQTDRDLVSWNSMLSGYAQHGYSQKALDVFRQMEAEGIEMDGVT 609
Query: 234 FLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDN--LLVSMYTKCGDLELARRVFDA 291
FL++I+GCA G L + + Y +++ +V +Y++ G L+ A + +
Sbjct: 610 FLSVIMGCAHAG-LVEEGQRYFDSMARDYGITPTMEHYACMVDLYSRAGKLDEAMSLIEG 668
Query: 292 V-LEKSVFLWTSMIGG 306
+ +W +++G
Sbjct: 669 MSFPAGPMVWRTLLGA 684
>gi|449451271|ref|XP_004143385.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g11460-like [Cucumis sativus]
Length = 623
Score = 345 bits (884), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 186/525 (35%), Positives = 295/525 (56%), Gaps = 8/525 (1%)
Query: 101 WNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCSFRQ----GISMHCCVY 156
WN+ + ++ C +A+ + +M G +A TF + C+ G H +
Sbjct: 17 WNTQLRELAKRCQFLQALSLYPQMLRHGDRPNAFTFPFALKSCAALSLPILGSQFHGQIT 76
Query: 157 KLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETS--IVSWTTIIGGYVNVGNVNE 214
K+G + E + ++SMY K V+ AR +F+E + V + ++ GYV+ +E
Sbjct: 77 KVGCVF-EPFVQTGLISMYCKGSLVDNARKVFEENFHSRKLTVCYNALVSGYVSNSKCSE 135
Query: 215 AFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVS 274
A L QM V + V L LI C NL L S+H LK G++++ + N ++
Sbjct: 136 AVLLFRQMNEEGVPVNSVTLLGLIPACVSPINLELGSSLHCSTLKYGFDSDVSVVNCFIT 195
Query: 275 MYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEAT 334
MY KCG + A+++FD + K + W +M+ GYAQ G + + L++ + V P+ T
Sbjct: 196 MYMKCGSVNYAQKLFDEMPVKGLISWNAMVSGYAQNGLATNVLELYRNMDMNGVHPDPVT 255
Query: 335 LATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVP 394
L LS+CA LG+ S G E+E I +G SN + +LI+M+++CG + KA+ VF+ +P
Sbjct: 256 LVGVLSSCANLGAQSVGHEVEFKIQASGFTSNPFLNNALINMYARCGNLTKAQAVFDGMP 315
Query: 395 DKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGL 454
++ L W+A+I GY +HG G+ A+ LF +M G++PD + +LSACSH+G+ D GL
Sbjct: 316 ERTLVSWTAIIGGYGMHGHGEIAVQLFKEMIR-SGIEPDGTAFVCVLSACSHAGLTDQGL 374
Query: 455 SFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMK 514
+FK M+ N+ +EP EHY C+VDLLGRAGR A I MP++ VW LL AC
Sbjct: 375 EYFKMMKRNYQLEPGPEHYSCMVDLLGRAGRLKEAQTLIESMPIKPDGAVWGALLGACKI 434
Query: 515 HHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWS 574
H NVEL E A + ++ L P + G Y+L++N++++A K R +M +++L K+PG S
Sbjct: 435 HKNVELAELAFERVIELEPENIGYYVLLSNIYSNANNSKGVLRIRIMMKEKKLKKDPGCS 494
Query: 575 QVEIDGSVQVFVAGDRSHHLSVDIRKTLKELHIKLLEAGYIAEAD 619
VE+ G V F+ GDR+H S +I + L+EL +++ E D
Sbjct: 495 YVELKGRVHPFIVGDRNHLQSDEIYRVLEELEAIIMQEFGKPEKD 539
Score = 232 bits (592), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 137/447 (30%), Positives = 234/447 (52%), Gaps = 10/447 (2%)
Query: 2 IRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGF 61
+R F + LS Y ML+ G N+FTFP LK+CA ++ G + H + KVG
Sbjct: 21 LRELAKRCQFLQALSLYPQMLRHGDRPNAFTFPFALKSCAALSLPILGSQFHGQITKVGC 80
Query: 62 QQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVL 121
+ FVQTGLI MY K S ++RKV +E + V +N+++S + EA+L+
Sbjct: 81 VFEPFVQTGLISMYCKGSLVDNARKVFEENFHSRKLTVCYNALVSGYVSNSKCSEAVLLF 140
Query: 122 KEMWVLGLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAK 177
++M G+ +++ T + ++ C + G S+HC K G ++++ + N ++MY K
Sbjct: 141 RQMNEEGVPVNSVTLLGLIPACVSPINLELGSSLHCSTLKYG-FDSDVSVVNCFITMYMK 199
Query: 178 FGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNL 237
G VN A+ +FDE+ ++SW ++ GY G L M V PD V + +
Sbjct: 200 CGSVNYAQKLFDEMPVKGLISWNAMVSGYAQNGLATNVLELYRNMDMNGVHPDPVTLVGV 259
Query: 238 ILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSV 297
+ CA +G + + + SG+ + L+N L++MY +CG+L A+ VFD + E+++
Sbjct: 260 LSSCANLGAQSVGHEVEFKIQASGFTSNPFLNNALINMYARCGNLTKAQAVFDGMPERTL 319
Query: 298 FLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEY 357
WT++IGGY G+ AV LFK ++++ + P+ LSAC+ G +G E +
Sbjct: 320 VSWTAIIGGYGMHGHGEIAVQLFKEMIRSGIEPDGTAFVCVLSACSHAGLTDQGLEYFKM 379
Query: 358 IVLN-GLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDK-DLAVWSAMINGYAIHGMGD 415
+ N LE + + ++ + + GR+ +A+ + E +P K D AVW A++ IH +
Sbjct: 380 MKRNYQLEPGPEHYSCMVDLLGRAGRLKEAQTLIESMPIKPDGAVWGALLGACKIHKNVE 439
Query: 416 QALNLFYKMQHVEGLKPDAVVYTSILS 442
A F + V L+P+ + Y +LS
Sbjct: 440 LAELAF---ERVIELEPENIGYYVLLS 463
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 85/313 (27%), Positives = 159/313 (50%), Gaps = 11/313 (3%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
++ +N E + + M + GV NS T ++ AC + ++ G +H LK G
Sbjct: 123 LVSGYVSNSKCSEAVLLFRQMNEEGVPVNSVTLLGLIPACVSPINLELGSSLHCSTLKYG 182
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F D V I MY KC ++K+ DEMPV + ++SWN+++S +++ L + +
Sbjct: 183 FDSDVSVVNCFITMYMKCGSVNYAQKLFDEMPV--KGLISWNAMVSGYAQNGLATNVLEL 240
Query: 121 LKEMWVLGLELSASTFVSVVSGCSFRQGISM-HCCVYKL---GLLNNEIPLANSVMSMYA 176
+ M + G+ T V V+S C+ S+ H +K+ G +N L N++++MYA
Sbjct: 241 YRNMDMNGVHPDPVTLVGVLSSCANLGAQSVGHEVEFKIQASGFTSNPF-LNNALINMYA 299
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
+ G + +A+++FD + E ++VSWT IIGGY G+ A L +M R + PD F+
Sbjct: 300 RCGNLTKAQAVFDGMPERTLVSWTAIIGGYGMHGHGEIAVQLFKEMIRSGIEPDGTAFVC 359
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDN--LLVSMYTKCGDLELARRVFDAV-L 293
++ C+ G L ++K Y E ++ +V + + G L+ A+ + +++ +
Sbjct: 360 VLSACSHAGLTDQGLEYFK-MMKRNYQLEPGPEHYSCMVDLLGRAGRLKEAQTLIESMPI 418
Query: 294 EKSVFLWTSMIGG 306
+ +W +++G
Sbjct: 419 KPDGAVWGALLGA 431
>gi|356495419|ref|XP_003516575.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39350-like [Glycine max]
Length = 666
Score = 344 bits (883), Expect = 8e-92, Method: Compositional matrix adjust.
Identities = 197/585 (33%), Positives = 322/585 (55%), Gaps = 11/585 (1%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTG-VHGNSFTFPLVLKACANINSIWDGKRVHSHVLKV 59
M+R G + L+ + ML +G + FT+P+V+KAC +++ I G +H K
Sbjct: 83 MMRMYVQIGRPFDALNLFVEMLGSGRTLPDKFTYPVVIKACGDLSLIDVGVGIHGQTFKF 142
Query: 60 GFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAIL 119
G+ D FVQ L+ MY + +++ V D P++ R+V+SWN++I+ + R ++A+
Sbjct: 143 GYDSDTFVQNTLLAMYMNAGEKEAAQLVFD--PMQERTVISWNTMINGYFRNNCAEDAVN 200
Query: 120 VLKEMWVLGLELSASTFVSVVSGCSFRQGISM----HCCVYKLGLLNNEIPLANSVMSMY 175
V M +G+E +T VSV+ C + + + H V + G N I + N+++ MY
Sbjct: 201 VYGRMMDVGVEPDCATVVSVLPACGLLKNVELGREVHTLVQEKGFWGN-IVVRNALVDMY 259
Query: 176 AKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFL 235
K G++ EA + + + +V+WTT+I GY+ G+ A LC M+ V P+ V
Sbjct: 260 VKCGQMKEAWLLAKGMDDKDVVTWTTLINGYILNGDARSALMLCGMMQCEGVKPNSVSIA 319
Query: 236 NLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEK 295
+L+ C + L +H+ ++ +E ++ L++MY KC L+ +VF +K
Sbjct: 320 SLLSACGSLVYLNHGKCLHAWAIRQKIESEVIVETALINMYAKCNCGNLSYKVFMGTSKK 379
Query: 296 SVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIE 355
W +++ G+ Q EA+ LFK++L V+P+ AT + L A A L L + I
Sbjct: 380 RTAPWNALLSGFIQNRLAREAIELFKQMLVKDVQPDHATFNSLLPAYAILADLQQAMNIH 439
Query: 356 EYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERV--PDKDLAVWSAMINGYAIHGM 413
Y++ +G +V + L+ ++SKCG + A ++F + DKD+ +WSA+I Y HG
Sbjct: 440 CYLIRSGFLYRLEVASILVDIYSKCGSLGYAHQIFNIISLKDKDIIIWSAIIAAYGKHGH 499
Query: 414 GDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHY 473
G A+ LF +M G+KP+ V +TS+L ACSH+G+V++G S F M I ++HY
Sbjct: 500 GKMAVKLFNQMVQ-SGVKPNHVTFTSVLHACSHAGLVNEGFSLFNFMLKQHQIISHVDHY 558
Query: 474 LCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNP 533
C++DLLGRAGR + A I MP+ VW LL AC+ H NVELGE AA+ L P
Sbjct: 559 TCMIDLLGRAGRLNDAYNLIRTMPITPNHAVWGALLGACVIHENVELGEVAARWTFKLEP 618
Query: 534 GSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEI 578
+TGNY+L+A L+ + G W +A R ++++ L K P S +E+
Sbjct: 619 ENTGNYVLLAKLYAAVGRWGDAERVRDMVNEVGLRKLPAHSLIEV 663
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 107/401 (26%), Positives = 207/401 (51%), Gaps = 9/401 (2%)
Query: 48 DGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISA 107
+ KR+H+ +L +G + + + L Y++C + + D++ + SWN+++
Sbjct: 29 ETKRLHALILTLGIFSSSNLCSKLATTYAQCHHASYASHLFDKLSQP--CLFSWNAMMRM 86
Query: 108 HSRACLNDEAILVLKEMWVLGLELSAS-TFVSVVSGCS----FRQGISMHCCVYKLGLLN 162
+ + +A+ + EM G L T+ V+ C G+ +H +K G +
Sbjct: 87 YVQIGRPFDALNLFVEMLGSGRTLPDKFTYPVVIKACGDLSLIDVGVGIHGQTFKFGY-D 145
Query: 163 NEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQM 222
++ + N++++MY G+ A+ +FD + E +++SW T+I GY +A + +M
Sbjct: 146 SDTFVQNTLLAMYMNAGEKEAAQLVFDPMQERTVISWNTMINGYFRNNCAEDAVNVYGRM 205
Query: 223 RRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDL 282
+ V PD ++++ C + N+ L +H+L+ + G+ + N LV MY KCG +
Sbjct: 206 MDVGVEPDCATVVSVLPACGLLKNVELGREVHTLVQEKGFWGNIVVRNALVDMYVKCGQM 265
Query: 283 ELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSAC 342
+ A + + +K V WT++I GY G A+ L + V+PN ++A+ LSAC
Sbjct: 266 KEAWLLAKGMDDKDVVTWTTLINGYILNGDARSALMLCGMMQCEGVKPNSVSIASLLSAC 325
Query: 343 AELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWS 402
L L+ GK + + + +ES V+T+LI+M++KC N + +VF K A W+
Sbjct: 326 GSLVYLNHGKCLHAWAIRQKIESEVIVETALINMYAKCNCGNLSYKVFMGTSKKRTAPWN 385
Query: 403 AMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSA 443
A+++G+ + + +A+ LF +M V+ ++PD + S+L A
Sbjct: 386 ALLSGFIQNRLAREAIELFKQML-VKDVQPDHATFNSLLPA 425
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 66/281 (23%), Positives = 106/281 (37%), Gaps = 59/281 (20%)
Query: 335 LATTLSACAEL-------GSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAK 387
ATT + C L S S+ K + I+ G+ S+ + + L +++C + A
Sbjct: 7 FATTAAQCESLLGKFSASQSHSETKRLHALILTLGIFSSSNLCSKLATTYAQCHHASYAS 66
Query: 388 EVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHS 447
+F+++ L W+AM+ Y G ALNLF +M PD Y ++ AC
Sbjct: 67 HLFDKLSQPCLFSWNAMMRMYVQIGRPFDALNLFVEMLGSGRTLPDKFTYPVVIKACGDL 126
Query: 448 GMVDDGLSF----FK--------------SMQSNFG--------IEPSIEHYL------- 474
++D G+ FK +M N G +P E +
Sbjct: 127 SLIDVGVGIHGQTFKFGYDSDTFVQNTLLAMYMNAGEKEAAQLVFDPMQERTVISWNTMI 186
Query: 475 -------CLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKN 527
C D + GR + ++ VE +L AC NVELG +
Sbjct: 187 NGYFRNNCAEDAVNVYGR-------MMDVGVEPDCATVVSVLPACGLLKNVELGREV--H 237
Query: 528 LLTLNPGSTGNYIL---MANLFTSAGMWKEAATARGLMDDR 565
L G GN ++ + +++ G KEA MDD+
Sbjct: 238 TLVQEKGFWGNIVVRNALVDMYVKCGQMKEAWLLAKGMDDK 278
>gi|242088929|ref|XP_002440297.1| hypothetical protein SORBIDRAFT_09g029295 [Sorghum bicolor]
gi|241945582|gb|EES18727.1| hypothetical protein SORBIDRAFT_09g029295 [Sorghum bicolor]
Length = 869
Score = 344 bits (882), Expect = 8e-92, Method: Compositional matrix adjust.
Identities = 206/617 (33%), Positives = 322/617 (52%), Gaps = 9/617 (1%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
M+ G EE L Y M+ GV + +TFP VL++C + G+ VH+HVL+ G
Sbjct: 166 MVGGYGKAGLLEEALDLYHRMMWAGVRPDVYTFPCVLRSCGGVPDWRMGREVHAHVLRFG 225
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F ++ V L+ MY+KC D V++RKV D M V +SWN++I+ H + + +
Sbjct: 226 FAEEVDVLNALMTMYAKCGDVVAARKVFDSMAVM--DCISWNAMIAGHFENGECNAGLEL 283
Query: 121 LKEMWVLGLELSASTFVSVVSGCSFRQGIS----MHCCVYKLGLLNNEIPLANSVMSMYA 176
M ++ + T SV I+ MH K G ++ NS++ MYA
Sbjct: 284 FLTMLQDEVQPNLMTITSVTVASGLLSDITFAKEMHGLAVKRGF-ATDVAFCNSLIQMYA 342
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
G + +AR++F + +SWT +I GY G ++A + M +V+PD + +
Sbjct: 343 SLGMMGQARTVFSRMDTRDAMSWTAMISGYEKNGFPDKALEVYALMEVNNVSPDDITIAS 402
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
+ CA +G+L + + +H L G+ + + N L+ MY K ++ A VF + EK
Sbjct: 403 ALAACACLGSLDVGVKLHELAESKGFMSYVVVTNALLEMYAKSKRIDKAIEVFKCMPEKD 462
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEE 356
V W+SMI G+ EA+ F+ +L V+PN T L+ACA G+L GKEI
Sbjct: 463 VVSWSSMIAGFCFNHRNFEALYYFRHML-ADVKPNSVTFIAALAACAATGALRSGKEIHA 521
Query: 357 YIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQ 416
+++ G+ + +LI ++ KCG+ A F KD+ W+ MI G+ HG G+
Sbjct: 522 HVLRCGIAYEGYLPNALIDLYVKCGQTGYAWAQFCAHGAKDVVSWNIMIAGFVAHGNGET 581
Query: 417 ALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCL 476
AL+ F +M + G PD V + ++L ACS GMV +G F SM + I P+++HY C+
Sbjct: 582 ALSFFNQMVKI-GECPDEVTFVALLCACSRGGMVSEGWELFHSMTDKYSIVPNLKHYACM 640
Query: 477 VDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGST 536
VDLL R G+ A I+EMP+ A VW LL+ C H +VELGE AAK +L L P
Sbjct: 641 VDLLSRVGQLTEAYNFINEMPITPDAAVWGALLNGCRIHRHVELGELAAKYVLELEPNDA 700
Query: 537 GNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSV 596
G ++L+ +L+ AG+W + A R M ++ L + G S VE+ G V F+ D SH
Sbjct: 701 GYHVLLCDLYADAGIWDKLARVRKTMREKGLDHDSGCSWVEVKGVVHAFLTDDESHPQIR 760
Query: 597 DIRKTLKELHIKLLEAG 613
+I L+ ++ ++ +G
Sbjct: 761 EINTVLEGIYERMKASG 777
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 113/356 (31%), Positives = 187/356 (52%), Gaps = 9/356 (2%)
Query: 86 KVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGC-- 143
+V +MP R V SWN ++ + +A L +EA+ + M G+ TF V+ C
Sbjct: 150 RVFAKMPER--DVFSWNVMVGGYGKAGLLEEALDLYHRMMWAGVRPDVYTFPCVLRSCGG 207
Query: 144 --SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTT 201
+R G +H V + G E+ + N++M+MYAK G V AR +FD + +SW
Sbjct: 208 VPDWRMGREVHAHVLRFGF-AEEVDVLNALMTMYAKCGDVVAARKVFDSMAVMDCISWNA 266
Query: 202 IIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSG 261
+I G+ G N L M + V P+L+ ++ + + ++ A MH L +K G
Sbjct: 267 MIAGHFENGECNAGLELFLTMLQDEVQPNLMTITSVTVASGLLSDITFAKEMHGLAVKRG 326
Query: 262 YNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFK 321
+ + N L+ MY G + AR VF + + WT+MI GY + G+P +A+ ++
Sbjct: 327 FATDVAFCNSLIQMYASLGMMGQARTVFSRMDTRDAMSWTAMISGYEKNGFPDKALEVYA 386
Query: 322 RLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCG 381
+ +V P++ T+A+ L+ACA LGSL G ++ E G S V +L+ M++K
Sbjct: 387 LMEVNNVSPDDITIASALAACACLGSLDVGVKLHELAESKGFMSYVVVTNALLEMYAKSK 446
Query: 382 RINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVY 437
RI+KA EVF+ +P+KD+ WS+MI G+ + +AL F M + +KP++V +
Sbjct: 447 RIDKAIEVFKCMPEKDVVSWSSMIAGFCFNHRNFEALYYFRHM--LADVKPNSVTF 500
>gi|58743498|gb|AAW81739.1| Putative Putative Pentatricopeptide (PPR) repeat-containing protein
[Brassica oleracea]
Length = 968
Score = 344 bits (882), Expect = 9e-92, Method: Compositional matrix adjust.
Identities = 201/626 (32%), Positives = 340/626 (54%), Gaps = 16/626 (2%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQT----GVHGNSFTFPLVLKACANINSIWDGKRVHSHV 56
MIR ++NG EE M++ + T VL CA I GK VH
Sbjct: 256 MIRVFSDNGLSEECFLLLGQMMEKDDEIAFTPDVATLATVLPVCARDREIGVGKGVHGLA 315
Query: 57 LKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDE 116
+K+ ++ V L+DMYSKC ++ +V+ ++ ++VVSWN+++ S A +
Sbjct: 316 MKLSLDKEVVVNNALMDMYSKCG-CINDAQVIFKLNNN-KNVVSWNTMVGGFSAAGDIHK 373
Query: 117 AILVLKEMWVLGLELSAS--TFVSVVSGCSFRQGI-----SMHCCVYKLGLLNNEIPLAN 169
+L++M G +L A T ++ V C F + + +HC K ++N +AN
Sbjct: 374 TFDLLRQMLAGGGDLRADEVTILNAVPVC-FEESVLPNLKELHCYSLKQEFVHNNELVAN 432
Query: 170 SVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTP 229
+ ++ YAK G ++ A +F I ++ SW +IGGY + + QM+ + P
Sbjct: 433 AFVASYAKCGSLSYAHRVFCSIRSKTVNSWNALIGGYSQSSDPRLSLDAYFQMKSSGLLP 492
Query: 230 DLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVF 289
DL +L+ C+Q+ +L L +H L++++ + + L+S+Y CG+L A +F
Sbjct: 493 DLFTVCSLLSACSQIKSLKLGKEVHGLIIRNRLERDSFVYISLLSLYIHCGELSTAHVLF 552
Query: 290 DAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLS 349
DA+ +K++ W +M+ GY Q G+P A++LF++++ V+P E ++ + AC+ L SL
Sbjct: 553 DAMEDKTLVSWNTMVNGYLQNGFPERALSLFRQMVLYGVQPCEISMMSVFGACSLLPSLR 612
Query: 350 KGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYA 409
G+E Y + LE N + S+I M++K G + ++ +VF + ++ +A W+AM+ GY
Sbjct: 613 LGREAHGYALKCLLEDNAFIACSVIDMYAKNGSVMESFKVFNGLKERSVASWNAMVMGYG 672
Query: 410 IHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPS 469
IHG +A+ LF +MQ G PD + + +L+AC+HSG+V +GL++ M++ FG+ P+
Sbjct: 673 IHGRAKEAIKLFEEMQRT-GHCPDELTFLGVLTACNHSGLVHEGLTYLDQMKTLFGMNPT 731
Query: 470 IEHYLCLVDLLGRAGRFDLALK-TIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNL 528
++HY C++D+L RAG+ D ALK EM E +W LLS+C H N+E+GE A L
Sbjct: 732 LKHYACVIDMLVRAGKLDEALKIATEEMSEEPGVGIWNFLLSSCRIHKNLEMGEKIAAKL 791
Query: 529 LTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAG 588
P NY+L++NL+ +G W E R M + L K+ G S +E++G V FVAG
Sbjct: 792 FVSEPEKPENYVLLSNLYAGSGKWDEVRKVRQRMKEMSLRKDAGCSWIELNGKVFSFVAG 851
Query: 589 DRSHHLSVDIRKTLKELHIKLLEAGY 614
+ S +I+ L ++ + GY
Sbjct: 852 ESSLDGFEEIKSLWSVLEREIGKMGY 877
Score = 230 bits (586), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 142/456 (31%), Positives = 249/456 (54%), Gaps = 14/456 (3%)
Query: 1 MIRNSTNNGSFEETLSTYSSML-QTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKV 59
+I + + N + L + M+ ++G+ ++FTFP V+KACA ++ + G VH V+K
Sbjct: 154 VISSYSRNELYHNVLEMFVKMITESGLLPDNFTFPCVVKACAGVSEVQVGLAVHGLVVKT 213
Query: 60 GFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAIL 119
+D FV L+ Y + +V MP R++VSWNS+I S L++E L
Sbjct: 214 RLVEDVFVSNALVSFYGTNGSVSDALRVFKIMPE--RNLVSWNSMIRVFSDNGLSEECFL 271
Query: 120 VLKEMWVLGLELS----ASTFVSVVSGCSFRQGISMHCCVYKLGL---LNNEIPLANSVM 172
+L +M E++ +T +V+ C+ + I + V+ L + L+ E+ + N++M
Sbjct: 272 LLGQMMEKDDEIAFTPDVATLATVLPVCARDREIGVGKGVHGLAMKLSLDKEVVVNNALM 331
Query: 173 SMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRR--MSVTPD 230
MY+K G +N+A+ IF ++VSW T++GG+ G++++ F L QM + D
Sbjct: 332 DMYSKCGCINDAQVIFKLNNNKNVVSWNTMVGGFSAAGDIHKTFDLLRQMLAGGGDLRAD 391
Query: 231 LVVFLNLILGCAQVGNLFLALSMHSLLLKSGY-NNEDPLDNLLVSMYTKCGDLELARRVF 289
V LN + C + L +H LK + +N + + N V+ Y KCG L A RVF
Sbjct: 392 EVTILNAVPVCFEESVLPNLKELHCYSLKQEFVHNNELVANAFVASYAKCGSLSYAHRVF 451
Query: 290 DAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLS 349
++ K+V W ++IGGY+Q P +++ + ++ + + P+ T+ + LSAC+++ SL
Sbjct: 452 CSIRSKTVNSWNALIGGYSQSSDPRLSLDAYFQMKSSGLLPDLFTVCSLLSACSQIKSLK 511
Query: 350 KGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYA 409
GKE+ I+ N LE + V SL+ ++ CG ++ A +F+ + DK L W+ M+NGY
Sbjct: 512 LGKEVHGLIIRNRLERDSFVYISLLSLYIHCGELSTAHVLFDAMEDKTLVSWNTMVNGYL 571
Query: 410 IHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACS 445
+G ++AL+LF +M + G++P + S+ ACS
Sbjct: 572 QNGFPERALSLFRQMV-LYGVQPCEISMMSVFGACS 606
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 117/422 (27%), Positives = 213/422 (50%), Gaps = 17/422 (4%)
Query: 38 KACANINSIWDGKRVHSHVLKVG-FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLR 96
+A I G+++H V + D + T +I MYS C SR V D + R +
Sbjct: 89 QASGRRKDIQLGRKIHQLVSESARLSNDDVLCTRVITMYSMCGSPDDSRSVFDAL--RKK 146
Query: 97 SVVSWNSIISAHSRACLNDEAI-LVLKEMWVLGLELSASTFVSVVSGCS----FRQGISM 151
++ WN++IS++SR L + + +K + GL TF VV C+ + G+++
Sbjct: 147 NLFQWNAVISSYSRNELYHNVLEMFVKMITESGLLPDNFTFPCVVKACAGVSEVQVGLAV 206
Query: 152 HCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGN 211
H V K L+ ++ ++N+++S Y G V++A +F + E ++VSW ++I + + G
Sbjct: 207 HGLVVKTRLV-EDVFVSNALVSFYGTNGSVSDALRVFKIMPERNLVSWNSMIRVFSDNGL 265
Query: 212 VNEAFGLCNQM----RRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDP 267
E F L QM ++ TPD+ ++ CA+ + + +H L +K + E
Sbjct: 266 SEECFLLLGQMMEKDDEIAFTPDVATLATVLPVCARDREIGVGKGVHGLAMKLSLDKEVV 325
Query: 268 LDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLK-- 325
++N L+ MY+KCG + A+ +F K+V W +M+GG++ G + +L +++L
Sbjct: 326 VNNALMDMYSKCGCINDAQVIFKLNNNKNVVSWNTMVGGFSAAGDIHKTFDLLRQMLAGG 385
Query: 326 TSVRPNEATLATTLSACAELGSLSKGKEIEEY-IVLNGLESNRQVQTSLIHMFSKCGRIN 384
+R +E T+ + C E L KE+ Y + + +N V + + ++KCG ++
Sbjct: 386 GDLRADEVTILNAVPVCFEESVLPNLKELHCYSLKQEFVHNNELVANAFVASYAKCGSLS 445
Query: 385 KAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSAC 444
A VF + K + W+A+I GY+ +L+ +++M+ GL PD S+LSAC
Sbjct: 446 YAHRVFCSIRSKTVNSWNALIGGYSQSSDPRLSLDAYFQMKS-SGLLPDLFTVCSLLSAC 504
Query: 445 SH 446
S
Sbjct: 505 SQ 506
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 69/148 (46%), Gaps = 2/148 (1%)
Query: 351 GKEIEEYIVLNGLESNRQVQ-TSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYA 409
G++I + + + SN V T +I M+S CG + ++ VF+ + K+L W+A+I+ Y+
Sbjct: 100 GRKIHQLVSESARLSNDDVLCTRVITMYSMCGSPDDSRSVFDALRKKNLFQWNAVISSYS 159
Query: 410 IHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPS 469
+ + L +F KM GL PD + ++ AC+ V GL+ + +E
Sbjct: 160 RNELYHNVLEMFVKMITESGLLPDNFTFPCVVKACAGVSEVQVGLAVHGLVVKTRLVEDV 219
Query: 470 IEHYLCLVDLLGRAGRFDLALKTIHEMP 497
LV G G AL+ MP
Sbjct: 220 FVSN-ALVSFYGTNGSVSDALRVFKIMP 246
>gi|296085026|emb|CBI28441.3| unnamed protein product [Vitis vinifera]
Length = 913
Score = 344 bits (882), Expect = 9e-92, Method: Compositional matrix adjust.
Identities = 219/661 (33%), Positives = 347/661 (52%), Gaps = 49/661 (7%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKAC--ANINSIWDGKRVHSHVLK 58
+I T NG +E + + M++ G N + F L+AC + + G ++H + K
Sbjct: 171 LISGYTQNGKPDEACARFRDMVRAGFIPNHYAFGSALRACQESGPSGCKLGVQIHGLISK 230
Query: 59 VGFQQDAFVQTGLIDMYSKCSDFVS-SRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEA 117
+ D V LI MY C D + +R V D + +R+ +SWNSIIS +SR A
Sbjct: 231 TRYGSDVVVCNVLISMYGSCLDSANDARSVFD--GIGIRNSISWNSIISVYSRRGDAVSA 288
Query: 118 ILVLKEMWVLGLELSA------STFVSVVSGCSFRQGISMHCCVYKLGLLNNEIPLANSV 171
+ M GL S S F + G R+G +H V + GL +N++ + N +
Sbjct: 289 YDLFSSMQKEGLGFSFKPNDAFSEFSVLEEG--RRKGREVHAHVIRTGLNDNKVAIGNGL 346
Query: 172 MSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGG-------------------YVNV--- 209
++MYAK G + +A S+F+ + E VSW ++I G Y V
Sbjct: 347 VNMYAKSGAIADACSVFELMVEKDSVSWNSLISGLDQNECSEDAAEMFSLMPEYDQVSWN 406
Query: 210 ----------GNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLK 259
+V++A QM R V F+N++ + + ++ +H+L+LK
Sbjct: 407 SVIGALSDSEASVSQAVKYFLQMMRGGWGLSRVTFINILSAVSSLSLHEVSHQIHALVLK 466
Query: 260 SGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLE-KSVFLWTSMIGGYAQLGYPSEAVN 318
+++ + N L+S Y KCG++ ++F + E + W SMI GY +A++
Sbjct: 467 YCLSDDTAIGNALLSCYGKCGEMNECEKIFARMSETRDEVSWNSMISGYIHNELLHKAMD 526
Query: 319 LFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFS 378
L +++ R + T AT LSACA + +L +G E+ + LES+ V ++L+ M+S
Sbjct: 527 LVWFMMQKGQRLDSFTFATILSACASVATLERGMEVHACGIRACLESDVVVGSALVDMYS 586
Query: 379 KCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYT 438
KCGRI+ A FE +P +++ W++MI+GYA HG G++AL LF +M ++G PD V +
Sbjct: 587 KCGRIDYASRFFELMPLRNVYSWNSMISGYARHGHGEKALKLFTRMM-LDGQPPDHVTFV 645
Query: 439 SILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPV 498
+LSACSH G V++G FKSM + + P +EH+ C+VDLLGRAG+ D I+ MP+
Sbjct: 646 GVLSACSHVGFVEEGFEHFKSMSEVYRLSPRVEHFSCMVDLLGRAGKLDEVGDFINSMPM 705
Query: 499 EVQAQVWAPLLSACMKHH--NVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAA 556
+ +W +L AC + + N ELG AA+ LL L P + NY+L+AN++ S W++ A
Sbjct: 706 KPNVLIWRTVLGACCRANGRNTELGRRAAEMLLELEPQNAVNYVLLANMYASGEKWEDVA 765
Query: 557 TARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKELHIKLLEAGYIA 616
AR M + + KE G S V + V VFVAGD+ H I L+EL+ K+ +AGYI
Sbjct: 766 KARTAMKEAAVKKEAGCSWVTMKDGVHVFVAGDKLHPEKDLIYDKLRELNRKMRDAGYIP 825
Query: 617 E 617
+
Sbjct: 826 Q 826
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 137/560 (24%), Positives = 256/560 (45%), Gaps = 68/560 (12%)
Query: 17 TYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYS 76
T +S T + +S TF ++ + + +H +K GF + F+ LI++Y
Sbjct: 86 TSTSHCNTTLFSSSETFESLINRYQGSCCSEEARELHLQSIKYGFVGNLFLSNTLINIYV 145
Query: 77 KCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTF 136
+ D S++K+ DEM R++V+W +IS +++ DEA ++M G + F
Sbjct: 146 RIGDLGSAQKLFDEMSN--RNLVTWACLISGYTQNGKPDEACARFRDMVRAGFIPNHYAF 203
Query: 137 VSVVSGCS------FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAK-FGKVNEARSIFD 189
S + C + G+ +H + K +++ + N ++SMY N+ARS+FD
Sbjct: 204 GSALRACQESGPSGCKLGVQIHGLISKT-RYGSDVVVCNVLISMYGSCLDSANDARSVFD 262
Query: 190 EIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRR----MSVTP-DLVVFLNLILGCAQV 244
IG + +SW +II Y G+ A+ L + M++ S P D +++ +
Sbjct: 263 GIGIRNSISWNSIISVYSRRGDAVSAYDLFSSMQKEGLGFSFKPNDAFSEFSVLEEGRRK 322
Query: 245 GNLFLALSMHSLLLKSGYN-NEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSM 303
G +H+ ++++G N N+ + N LV+MY K G + A VF+ ++EK W S+
Sbjct: 323 GR-----EVHAHVIRTGLNDNKVAIGNGLVNMYAKSGAIADACSVFELMVEKDSVSWNSL 377
Query: 304 IGG-------------------YAQLGYP-------------SEAVNLFKRLLKTSVRPN 331
I G Y Q+ + S+AV F ++++ +
Sbjct: 378 ISGLDQNECSEDAAEMFSLMPEYDQVSWNSVIGALSDSEASVSQAVKYFLQMMRGGWGLS 437
Query: 332 EATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFE 391
T LSA + L +I ++ L + + +L+ + KCG +N+ +++F
Sbjct: 438 RVTFINILSAVSSLSLHEVSHQIHALVLKYCLSDDTAIGNALLSCYGKCGEMNECEKIFA 497
Query: 392 RVPD-KDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMV 450
R+ + +D W++MI+GY + + +A++L + M +G + D+ + +ILSAC+ +
Sbjct: 498 RMSETRDEVSWNSMISGYIHNELLHKAMDLVWFMMQ-KGQRLDSFTFATILSACASVATL 556
Query: 451 DDGLSFFKSMQSNFGIEPSIEHYL----CLVDLLGRAGRFDLALKTIHEMPVEVQAQVWA 506
+ G+ GI +E + LVD+ + GR D A + MP+ W
Sbjct: 557 ERGMEVHAC-----GIRACLESDVVVGSALVDMYSKCGRIDYASRFFELMPLR-NVYSWN 610
Query: 507 PLLSACMKHHNVELGEYAAK 526
++S +H + GE A K
Sbjct: 611 SMISGYARHGH---GEKALK 627
>gi|115462637|ref|NP_001054918.1| Os05g0212100 [Oryza sativa Japonica Group]
gi|48475165|gb|AAT44234.1| unknown protein, contains PPR repeat [Oryza sativa Japonica Group]
gi|113578469|dbj|BAF16832.1| Os05g0212100 [Oryza sativa Japonica Group]
gi|215695208|dbj|BAG90399.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222630605|gb|EEE62737.1| hypothetical protein OsJ_17540 [Oryza sativa Japonica Group]
Length = 822
Score = 344 bits (882), Expect = 9e-92, Method: Compositional matrix adjust.
Identities = 210/626 (33%), Positives = 342/626 (54%), Gaps = 24/626 (3%)
Query: 6 TNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKAC-ANINSIWDGKRVHSHVLKVG-FQQ 63
NG+ E+L ML++G+ N++T V AC + G V V K+G +
Sbjct: 127 ARNGAERESLLLIGEMLESGLLPNAYTLCAVAHACFPHELYCLVGGVVLGLVHKMGLWGT 186
Query: 64 DAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKE 123
D V + LIDM ++ D S+RKV D + + +VV W +IS + + +EA+ + +
Sbjct: 187 DIAVGSALIDMLARNGDLASARKVFDGLIEK--TVVVWTLLISRYVQGECAEEAVEIFLD 244
Query: 124 MWVLGLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFG 179
G E T S++S C S R G+ +H ++G ++ ++ ++ MYAK
Sbjct: 245 FLEDGFEPDRYTMSSMISACTELGSVRLGLQLHSLALRMGFASDAC-VSCGLVDMYAKSN 303
Query: 180 ---KVNEARSIFDEIGETSIVSWTTIIGGYVNVG-NVNEAFGLCNQMRRMSVTPDLVVFL 235
++ A +F+ + + ++SWT +I GYV G N+ L +M S+ P+ + +
Sbjct: 304 IEQAMDYANKVFERMRKNDVISWTALISGYVQSGVQENKVMVLFGEMLNESIKPNHITYS 363
Query: 236 NLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEK 295
+++ CA + + +H+ ++KS + N LVSMY + G +E ARRVF+ + E+
Sbjct: 364 SILKACANISDHDSGRQVHAHVIKSNQAAAHTVGNALVSMYAESGCMEEARRVFNQLYER 423
Query: 296 SVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIE 355
S MI + L R+ + + + +T A+ +SA A +G L+KG+++
Sbjct: 424 S------MISCITE----GRDAPLDHRIGRMDMGISSSTFASLISAAASVGMLTKGQQLH 473
Query: 356 EYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGD 415
+ G S+R V SL+ M+S+CG + A F + D+++ W++MI+G A HG +
Sbjct: 474 AMTLKAGFGSDRFVSNSLVSMYSRCGYLEDACRSFNELKDRNVISWTSMISGLAKHGYAE 533
Query: 416 QALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLC 475
+AL+LF+ M + G+KP+ V Y ++LSACSH G+V +G +F+SMQ + G+ P +EHY C
Sbjct: 534 RALSLFHDMI-LTGVKPNDVTYIAVLSACSHVGLVREGKEYFRSMQRDHGLIPRMEHYAC 592
Query: 476 LVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGS 535
+VDLL R+G AL+ I+EMP++ A VW LL AC H N+E+GE AAKN++ L P
Sbjct: 593 MVDLLARSGLVKEALEFINEMPLKADALVWKTLLGACRSHDNIEVGEIAAKNVIELEPRD 652
Query: 536 TGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLS 595
Y+L++NL+ AG+W E A R M D L KE G S +E++ + F AGD SH +
Sbjct: 653 PAPYVLLSNLYADAGLWDEVARIRSAMRDNNLNKETGLSWMEVENTTHEFRAGDTSHPRA 712
Query: 596 VDIRKTLKELHIKLLEAGYIAEADIV 621
DI L L ++ GY+ + IV
Sbjct: 713 QDIYGKLDTLVGEIKGMGYVPDTSIV 738
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 139/551 (25%), Positives = 258/551 (46%), Gaps = 55/551 (9%)
Query: 49 GKRVHSHVLKVGF-QQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISA 107
G+ +H +L+ +DA V L+ +YS+C S+R V D M LR +VSW ++ S
Sbjct: 67 GRALHRRLLRGDLLDRDAVVANSLLTLYSRCGAVASARNVFDGMR-GLRDIVSWTAMASC 125
Query: 108 HSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCSFRQGISMHC--------CVYKLG 159
+R E++L++ EM GL +A T +V C + ++C V+K+G
Sbjct: 126 LARNGAERESLLLIGEMLESGLLPNAYTLCAVAHACFPHE---LYCLVGGVVLGLVHKMG 182
Query: 160 LLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLC 219
L +I + ++++ M A+ G + AR +FD + E ++V WT +I YV EA +
Sbjct: 183 LWGTDIAVGSALIDMLARNGDLASARKVFDGLIEKTVVVWTLLISRYVQGECAEEAVEIF 242
Query: 220 NQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKC 279
PD ++I C ++G++ L L +HSL L+ G+ ++ + LV MY K
Sbjct: 243 LDFLEDGFEPDRYTMSSMISACTELGSVRLGLQLHSLALRMGFASDACVSCGLVDMYAKS 302
Query: 280 G---DLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVN-LFKRLLKTSVRPNEATL 335
++ A +VF+ + + V WT++I GY Q G V LF +L S++PN T
Sbjct: 303 NIEQAMDYANKVFERMRKNDVISWTALISGYVQSGVQENKVMVLFGEMLNESIKPNHITY 362
Query: 336 ATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPD 395
++ L ACA + G+++ +++ + + V +L+ M+++ G + +A+ VF ++ +
Sbjct: 363 SSILKACANISDHDSGRQVHAHVIKSNQAAAHTVGNALVSMYAESGCMEEARRVFNQLYE 422
Query: 396 KDL-------------------------AVWSAMINGYAIHGMGDQALNLFYKMQHVEGL 430
+ + + ++++I+ A GM + L + M G
Sbjct: 423 RSMISCITEGRDAPLDHRIGRMDMGISSSTFASLISAAASVGMLTKGQQL-HAMTLKAGF 481
Query: 431 KPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLAL 490
D V S++S S G ++D F ++ + ++ + ++ L + G + AL
Sbjct: 482 GSDRFVSNSLVSMYSRCGYLEDACRSFNELK-----DRNVISWTSMISGLAKHGYAERAL 536
Query: 491 KTIHEM---PVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLT---LNPGSTGNYILMAN 544
H+M V+ + +LSAC V G+ +++ L P +Y M +
Sbjct: 537 SLFHDMILTGVKPNDVTYIAVLSACSHVGLVREGKEYFRSMQRDHGLIP-RMEHYACMVD 595
Query: 545 LFTSAGMWKEA 555
L +G+ KEA
Sbjct: 596 LLARSGLVKEA 606
Score = 145 bits (366), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 91/318 (28%), Positives = 163/318 (51%), Gaps = 12/318 (3%)
Query: 145 FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEI-GETSIVSWTTII 203
R G ++H + + LL+ + +ANS++++Y++ G V AR++FD + G IVSWT +
Sbjct: 64 LRLGRALHRRLLRGDLLDRDAVVANSLLTLYSRCGAVASARNVFDGMRGLRDIVSWTAMA 123
Query: 204 GGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQ-----VGNLFLALSMHSLLL 258
G E+ L +M + P+ + C + + +H + L
Sbjct: 124 SCLARNGAERESLLLIGEMLESGLLPNAYTLCAVAHACFPHELYCLVGGVVLGLVHKMGL 183
Query: 259 KSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVN 318
+ + + + L+ M + GDL AR+VFD ++EK+V +WT +I Y Q EAV
Sbjct: 184 ---WGTDIAVGSALIDMLARNGDLASARKVFDGLIEKTVVVWTLLISRYVQGECAEEAVE 240
Query: 319 LFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFS 378
+F L+ P+ T+++ +SAC ELGS+ G ++ + G S+ V L+ M++
Sbjct: 241 IFLDFLEDGFEPDRYTMSSMISACTELGSVRLGLQLHSLALRMGFASDACVSCGLVDMYA 300
Query: 379 KCG---RINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAV 435
K ++ A +VFER+ D+ W+A+I+GY G+ + + + + E +KP+ +
Sbjct: 301 KSNIEQAMDYANKVFERMRKNDVISWTALISGYVQSGVQENKVMVLFGEMLNESIKPNHI 360
Query: 436 VYTSILSACSHSGMVDDG 453
Y+SIL AC++ D G
Sbjct: 361 TYSSILKACANISDHDSG 378
Score = 40.8 bits (94), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 26/108 (24%), Positives = 53/108 (49%), Gaps = 2/108 (1%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKV- 59
MI +G E LS + M+ TGV N T+ VL AC+++ + +GK + +
Sbjct: 522 MISGLAKHGYAERALSLFHDMILTGVKPNDVTYIAVLSACSHVGLVREGKEYFRSMQRDH 581
Query: 60 GFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISA 107
G ++D+ ++ + + ++EMP++ ++V W +++ A
Sbjct: 582 GLIPRMEHYACMVDLLARSGLVKEALEFINEMPLKADALV-WKTLLGA 628
>gi|449523219|ref|XP_004168621.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33170-like [Cucumis sativus]
Length = 755
Score = 344 bits (882), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 190/610 (31%), Positives = 337/610 (55%), Gaps = 26/610 (4%)
Query: 29 NSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVL 88
+S+ FPL L+ C + N + + +H H++K GF +D FV T L+++YSKC S+ KV
Sbjct: 64 SSYYFPL-LQECIDRNLATEARMIHGHIVKTGFHEDLFVMTFLVNVYSKCGVMESAHKVF 122
Query: 89 DEMPVRLRSVVSWNSIISAHSRACLNDEAILVLK---EMWVLGLELSASTFVSVVSGCSF 145
D +P R+V +W ++++ + + N +L L+ +M G S T V++ CS
Sbjct: 123 DNLP--RRNVNAWTTLLTGYVQ---NSHPLLALQLFIKMLEAGAYPSNYTLGIVLNACSS 177
Query: 146 RQGI----SMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTT 201
Q I +H + K + + + + NS+ S Y+KF ++ A F I E ++SWT+
Sbjct: 178 LQSIEFGKQVHAYLIKYHI-DFDTSIGNSLSSFYSKFRRLEFAIKAFKIIKEKDVISWTS 236
Query: 202 IIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSG 261
+I + G + M + P+ +++ C + L L +HSL +K G
Sbjct: 237 VISSCCDNGQAARSLSFFMDMLSDGMKPNEYTLTSVLSACCVMLTLDLGAQIHSLSIKLG 296
Query: 262 YNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSE------ 315
Y + + N ++ +Y KCG L A+++F+ + ++ W +MI G+A++ +E
Sbjct: 297 YGSSILIKNSIMYLYLKCGWLIEAQKLFEGMETLNLVTWNAMIAGHAKMMDLAEDDVAAH 356
Query: 316 -----AVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQ 370
A+ +F++L ++ ++P+ T ++ LS C+ L +L +G++I I+ +G+ ++ V
Sbjct: 357 KSGSTALAMFQKLYRSGMKPDLFTFSSVLSVCSNLVALEQGEQIHGQIIKSGVLADVVVG 416
Query: 371 TSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGL 430
T+L+ M++KCG I+KA + F +P + + W++MI G+A HG+ QAL LF M+ V G+
Sbjct: 417 TALVSMYNKCGSIDKASKAFLEMPSRTMISWTSMITGFARHGLSQQALQLFEDMRLV-GI 475
Query: 431 KPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLAL 490
KP+ V + +LSACSH+G+ D+ L +F+ MQ + I+P ++H+ CL+D+ R GR + A
Sbjct: 476 KPNQVTFVGVLSACSHAGLADEALYYFELMQKQYNIKPVMDHFACLIDMYLRLGRVEEAF 535
Query: 491 KTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSAG 550
+H+M E +W+ L++ C H +LG YAA+ LL L P Y+ + N+ SAG
Sbjct: 536 DVVHKMNFEPNETIWSMLIAGCRSHGKSDLGFYAAEQLLKLKPKDVETYVSLLNMHISAG 595
Query: 551 MWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKELHIKLL 610
WK+ + R LM + ++ K WS + I V F D+SH S+++ K L+ + ++
Sbjct: 596 RWKDVSKVRKLMKEEKVGKLKDWSWISIKEKVYSFKPNDKSHCQSLEMYKLLETVLNEVK 655
Query: 611 EAGYIAEADI 620
GY D+
Sbjct: 656 ALGYEPIEDV 665
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 130/465 (27%), Positives = 228/465 (49%), Gaps = 42/465 (9%)
Query: 15 LSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDM 74
L + ML+ G + +++T +VL AC+++ SI GK+VH++++K D + L
Sbjct: 150 LQLFIKMLEAGAYPSNYTLGIVLNACSSLQSIEFGKQVHAYLIKYHIDFDTSIGNSLSSF 209
Query: 75 YSKCSDF---VSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLK---EMWVLG 128
YSK + + K++ E + V+SW S+IS+ C N +A L +M G
Sbjct: 210 YSKFRRLEFAIKAFKIIKE-----KDVISWTSVISS---CCDNGQAARSLSFFMDMLSDG 261
Query: 129 LELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEA 184
++ + T SV+S C + G +H KLG + I + NS+M +Y K G + EA
Sbjct: 262 MKPNEYTLTSVLSACCVMLTLDLGAQIHSLSIKLG-YGSSILIKNSIMYLYLKCGWLIEA 320
Query: 185 RSIFDEIGETSIVSWTTIIGGYVNVGNVNE-----------AFGLCNQMRRMSVTPDLVV 233
+ +F+ + ++V+W +I G+ + ++ E A + ++ R + PDL
Sbjct: 321 QKLFEGMETLNLVTWNAMIAGHAKMMDLAEDDVAAHKSGSTALAMFQKLYRSGMKPDLFT 380
Query: 234 FLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVL 293
F +++ C+ + L +H ++KSG + + LVSMY KCG ++ A + F +
Sbjct: 381 FSSVLSVCSNLVALEQGEQIHGQIIKSGVLADVVVGTALVSMYNKCGSIDKASKAFLEMP 440
Query: 294 EKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKE 353
+++ WTSMI G+A+ G +A+ LF+ + ++PN+ T LSAC+ G E
Sbjct: 441 SRTMISWTSMITGFARHGLSQQALQLFEDMRLVGIKPNQVTFVGVLSACSHAG---LADE 497
Query: 354 IEEYIVLNGLESNRQVQ----TSLIHMFSKCGRINKAKEVFERVP-DKDLAVWSAMINGY 408
Y L + N + LI M+ + GR+ +A +V ++ + + +WS +I G
Sbjct: 498 ALYYFELMQKQYNIKPVMDHFACLIDMYLRLGRVEEAFDVVHKMNFEPNETIWSMLIAGC 557
Query: 409 AIHGMGDQALNLFYKMQHVEGLKP-DAVVYTSILSACSHSGMVDD 452
HG D FY + + LKP D Y S+L+ +G D
Sbjct: 558 RSHGKSDLG---FYAAEQLLKLKPKDVETYVSLLNMHISAGRWKD 599
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 94/360 (26%), Positives = 180/360 (50%), Gaps = 30/360 (8%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+I + +NG +LS + ML G+ N +T VL AC + ++ G ++HS +K+G
Sbjct: 237 VISSCCDNGQAARSLSFFMDMLSDGMKPNEYTLTSVLSACCVMLTLDLGAQIHSLSIKLG 296
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDE---- 116
+ ++ ++ +Y KC + ++K+ + M ++V+WN++I+ H++ E
Sbjct: 297 YGSSILIKNSIMYLYLKCGWLIEAQKLFEGMET--LNLVTWNAMIAGHAKMMDLAEDDVA 354
Query: 117 -------AILVLKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEI 165
A+ + ++++ G++ TF SV+S CS QG +H + K G+L ++
Sbjct: 355 AHKSGSTALAMFQKLYRSGMKPDLFTFSSVLSVCSNLVALEQGEQIHGQIIKSGVL-ADV 413
Query: 166 PLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRM 225
+ +++SMY K G +++A F E+ +++SWT++I G+ G +A L MR +
Sbjct: 414 VVGTALVSMYNKCGSIDKASKAFLEMPSRTMISWTSMITGFARHGLSQQALQLFEDMRLV 473
Query: 226 SVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNL--LVSMYTKCGDLE 283
+ P+ V F+ ++ C+ G AL L+ K YN + +D+ L+ MY + G +E
Sbjct: 474 GIKPNQVTFVGVLSACSHAGLADEALYYFELMQKQ-YNIKPVMDHFACLIDMYLRLGRVE 532
Query: 284 LARRVFDAV----LEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTL 339
A FD V E + +W+ +I G G ++LLK ++P + +L
Sbjct: 533 EA---FDVVHKMNFEPNETIWSMLIAGCRSHGKSDLGFYAAEQLLK--LKPKDVETYVSL 587
>gi|357136755|ref|XP_003569969.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20770-like [Brachypodium distachyon]
Length = 805
Score = 344 bits (882), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 193/589 (32%), Positives = 316/589 (53%), Gaps = 43/589 (7%)
Query: 9 GSFEETLSTYSSMLQTGVHGNSFTFPLVLKACAN--------INSIWDGKRVHSHVLKVG 60
GS ++ L ++ M ++GV + VL +CA + + G+ +H+ +++ G
Sbjct: 220 GSVDDALRLFARMCRSGVRVDPVAVSSVLGSCAQACASEFDVVRAFRLGQCIHALIVRKG 279
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F D V LIDMY+KC + KV D +P S VSWN +I+ +A +A+ V
Sbjct: 280 FGSDQHVGNSLIDMYTKCMQMDEAVKVFDSLPN--ISTVSWNILITGFGQAGSYAKALEV 337
Query: 121 LKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGK 180
L M G E + T+ ++++ C K
Sbjct: 338 LNLMEESGSEPNEVTYSNMLASC--------------------------------IKARD 365
Query: 181 VNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILG 240
V AR++FD+I S+ +W T++ GY + L +M+ +V PD ++
Sbjct: 366 VLSARAMFDKISRPSVTTWNTLLSGYCQEELHQDTVELFRRMQHQNVQPDRTTLAVILSS 425
Query: 241 CAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLW 300
C+++G L L +HS ++ +N+ + + LV MY+KCG + +AR +F+ + E+ V W
Sbjct: 426 CSRLGILDLGTQVHSASVRFLLHNDMFVASGLVDMYSKCGQIGIARIIFNRMTERDVVCW 485
Query: 301 TSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVL 360
SMI G A EA + FK++ + P E++ A+ +++CA L S+ +G++I IV
Sbjct: 486 NSMISGLAIHSLNEEAFDFFKQMRGNGMMPTESSYASMINSCARLSSVPQGRQIHAQIVK 545
Query: 361 NGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNL 420
+G + N V ++LI M++KCG ++ A+ F+ + K++ W+ MI+GYA +G G++A++L
Sbjct: 546 DGYDQNVYVGSALIDMYAKCGNMDDARVFFDCMVTKNIVAWNEMIHGYAQNGFGEKAVDL 605
Query: 421 FYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLL 480
F M E +PD V + ++L+ CSHSG+VD+ ++FF SM+S +GI P EHY CL+D L
Sbjct: 606 FEYMLTTE-QRPDGVTFIAVLTGCSHSGLVDEAIAFFNSMESTYGITPLAEHYTCLIDGL 664
Query: 481 GRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYI 540
GRAGR I MP + VW LL+AC HHN ELGE AAK+L L+P + Y+
Sbjct: 665 GRAGRLVEVEALIDNMPCKDDPIVWEVLLAACAVHHNAELGECAAKHLFRLDPKNPSPYV 724
Query: 541 LMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGD 589
L++N++ S G +A+ R LM R + K G+S ++ V F+ D
Sbjct: 725 LLSNIYASLGRHGDASGVRALMSSRGVVKGRGYSWIDHKDGVHAFMVAD 773
Score = 168 bits (426), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 124/466 (26%), Positives = 221/466 (47%), Gaps = 53/466 (11%)
Query: 62 QQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVL 121
+ +A+ + + D ++R +LDEMP R +VVSWN++I+A +R+ EA+ +
Sbjct: 71 RPNAYSYNAALSAARRAGDLDAARALLDEMPDR--NVVSWNTVIAALARSERAGEALELY 128
Query: 122 KEMWVLGLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAK 177
+ M GL + T SV+S C + G H K+GL N + + N+++ MY K
Sbjct: 129 EGMLREGLVPTHFTLASVLSACGAVAALDDGRRCHGLAVKVGLDEN-LFVENALLGMYTK 187
Query: 178 FGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNL 237
G V +A +FD + + VS+T ++GG V G+V++A L +M R V D V ++
Sbjct: 188 CGGVEDAVRLFDGMASPNEVSFTAMMGGLVQAGSVDDALRLFARMCRSGVRVDPVAVSSV 247
Query: 238 ILGCAQ--------VGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVF 289
+ CAQ V L +H+L+++ G+ ++ + N L+ MYTKC ++ A +VF
Sbjct: 248 LGSCAQACASEFDVVRAFRLGQCIHALIVRKGFGSDQHVGNSLIDMYTKCMQMDEAVKVF 307
Query: 290 DAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLS 349
D++ S W +I G+ Q G ++A+ + + ++ PNE T + L++C
Sbjct: 308 DSLPNISTVSWNILITGFGQAGSYAKALEVLNLMEESGSEPNEVTYSNMLASC------- 360
Query: 350 KGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYA 409
I+ VL+ A+ +F+++ + W+ +++GY
Sbjct: 361 ----IKARDVLS------------------------ARAMFDKISRPSVTTWNTLLSGYC 392
Query: 410 IHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPS 469
+ + LF +MQH + ++PD ILS+CS G++D G S F +
Sbjct: 393 QEELHQDTVELFRRMQH-QNVQPDRTTLAVILSSCSRLGILDLGTQ-VHSASVRFLLHND 450
Query: 470 IEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKH 515
+ LVD+ + G+ +A + M E W ++S H
Sbjct: 451 MFVASGLVDMYSKCGQIGIARIIFNRM-TERDVVCWNSMISGLAIH 495
>gi|449461407|ref|XP_004148433.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33170-like [Cucumis sativus]
Length = 749
Score = 343 bits (881), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 190/610 (31%), Positives = 337/610 (55%), Gaps = 26/610 (4%)
Query: 29 NSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVL 88
+S+ FPL L+ C + N + + +H H++K GF +D FV T L+++YSKC S+ KV
Sbjct: 58 SSYYFPL-LQECIDRNLATEARMIHGHIVKTGFHEDLFVMTFLVNVYSKCGVMESAHKVF 116
Query: 89 DEMPVRLRSVVSWNSIISAHSRACLNDEAILVLK---EMWVLGLELSASTFVSVVSGCSF 145
D +P R+V +W ++++ + + N +L L+ +M G S T V++ CS
Sbjct: 117 DNLP--RRNVNAWTTLLTGYVQ---NSHPLLALQLFIKMLEAGAYPSNYTLGIVLNACSS 171
Query: 146 RQGI----SMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTT 201
Q I +H + K + + + + NS+ S Y+KF ++ A F I E ++SWT+
Sbjct: 172 LQSIEFGKQVHAYLIKYHI-DFDTSIGNSLSSFYSKFRRLEFAIKAFKIIKEKDVISWTS 230
Query: 202 IIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSG 261
+I + G + M + P+ +++ C + L L +HSL +K G
Sbjct: 231 VISSCCDNGQAARSLSFFMDMLSDGMKPNEYTLTSVLSACCVMLTLDLGAQIHSLSIKLG 290
Query: 262 YNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSE------ 315
Y + + N ++ +Y KCG L A+++F+ + ++ W +MI G+A++ +E
Sbjct: 291 YGSSILIKNSIMYLYLKCGWLIEAQKLFEGMETLNLVTWNAMIAGHAKMMDLAEDDVAAH 350
Query: 316 -----AVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQ 370
A+ +F++L ++ ++P+ T ++ LS C+ L +L +G++I I+ +G+ ++ V
Sbjct: 351 KSGSTALAMFQKLYRSGMKPDLFTFSSVLSVCSNLVALEQGEQIHGQIIKSGVLADVVVG 410
Query: 371 TSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGL 430
T+L+ M++KCG I+KA + F +P + + W++MI G+A HG+ QAL LF M+ V G+
Sbjct: 411 TALVSMYNKCGSIDKASKAFLEMPSRTMISWTSMITGFARHGLSQQALQLFEDMRLV-GI 469
Query: 431 KPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLAL 490
KP+ V + +LSACSH+G+ D+ L +F+ MQ + I+P ++H+ CL+D+ R GR + A
Sbjct: 470 KPNQVTFVGVLSACSHAGLADEALYYFELMQKQYNIKPVMDHFACLIDMYLRLGRVEEAF 529
Query: 491 KTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSAG 550
+H+M E +W+ L++ C H +LG YAA+ LL L P Y+ + N+ SAG
Sbjct: 530 DVVHKMNFEPNETIWSMLIAGCRSHGKSDLGFYAAEQLLKLKPKDVETYVSLLNMHISAG 589
Query: 551 MWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKELHIKLL 610
WK+ + R LM + ++ K WS + I V F D+SH S+++ K L+ + ++
Sbjct: 590 RWKDVSKVRKLMKEEKVGKLKDWSWISIKEKVYSFKPNDKSHCQSLEMYKLLETVLNEVK 649
Query: 611 EAGYIAEADI 620
GY D+
Sbjct: 650 ALGYEPIEDV 659
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 130/465 (27%), Positives = 228/465 (49%), Gaps = 42/465 (9%)
Query: 15 LSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDM 74
L + ML+ G + +++T +VL AC+++ SI GK+VH++++K D + L
Sbjct: 144 LQLFIKMLEAGAYPSNYTLGIVLNACSSLQSIEFGKQVHAYLIKYHIDFDTSIGNSLSSF 203
Query: 75 YSKCSDF---VSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLK---EMWVLG 128
YSK + + K++ E + V+SW S+IS+ C N +A L +M G
Sbjct: 204 YSKFRRLEFAIKAFKIIKE-----KDVISWTSVISS---CCDNGQAARSLSFFMDMLSDG 255
Query: 129 LELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEA 184
++ + T SV+S C + G +H KLG + I + NS+M +Y K G + EA
Sbjct: 256 MKPNEYTLTSVLSACCVMLTLDLGAQIHSLSIKLG-YGSSILIKNSIMYLYLKCGWLIEA 314
Query: 185 RSIFDEIGETSIVSWTTIIGGYVNVGNVNE-----------AFGLCNQMRRMSVTPDLVV 233
+ +F+ + ++V+W +I G+ + ++ E A + ++ R + PDL
Sbjct: 315 QKLFEGMETLNLVTWNAMIAGHAKMMDLAEDDVAAHKSGSTALAMFQKLYRSGMKPDLFT 374
Query: 234 FLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVL 293
F +++ C+ + L +H ++KSG + + LVSMY KCG ++ A + F +
Sbjct: 375 FSSVLSVCSNLVALEQGEQIHGQIIKSGVLADVVVGTALVSMYNKCGSIDKASKAFLEMP 434
Query: 294 EKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKE 353
+++ WTSMI G+A+ G +A+ LF+ + ++PN+ T LSAC+ G E
Sbjct: 435 SRTMISWTSMITGFARHGLSQQALQLFEDMRLVGIKPNQVTFVGVLSACSHAGL---ADE 491
Query: 354 IEEYIVLNGLESNRQVQ----TSLIHMFSKCGRINKAKEVFERVP-DKDLAVWSAMINGY 408
Y L + N + LI M+ + GR+ +A +V ++ + + +WS +I G
Sbjct: 492 ALYYFELMQKQYNIKPVMDHFACLIDMYLRLGRVEEAFDVVHKMNFEPNETIWSMLIAGC 551
Query: 409 AIHGMGDQALNLFYKMQHVEGLKP-DAVVYTSILSACSHSGMVDD 452
HG D FY + + LKP D Y S+L+ +G D
Sbjct: 552 RSHGKSDLG---FYAAEQLLKLKPKDVETYVSLLNMHISAGRWKD 593
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 94/360 (26%), Positives = 180/360 (50%), Gaps = 30/360 (8%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+I + +NG +LS + ML G+ N +T VL AC + ++ G ++HS +K+G
Sbjct: 231 VISSCCDNGQAARSLSFFMDMLSDGMKPNEYTLTSVLSACCVMLTLDLGAQIHSLSIKLG 290
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDE---- 116
+ ++ ++ +Y KC + ++K+ + M ++V+WN++I+ H++ E
Sbjct: 291 YGSSILIKNSIMYLYLKCGWLIEAQKLFEGMET--LNLVTWNAMIAGHAKMMDLAEDDVA 348
Query: 117 -------AILVLKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEI 165
A+ + ++++ G++ TF SV+S CS QG +H + K G+L ++
Sbjct: 349 AHKSGSTALAMFQKLYRSGMKPDLFTFSSVLSVCSNLVALEQGEQIHGQIIKSGVL-ADV 407
Query: 166 PLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRM 225
+ +++SMY K G +++A F E+ +++SWT++I G+ G +A L MR +
Sbjct: 408 VVGTALVSMYNKCGSIDKASKAFLEMPSRTMISWTSMITGFARHGLSQQALQLFEDMRLV 467
Query: 226 SVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNL--LVSMYTKCGDLE 283
+ P+ V F+ ++ C+ G AL L+ K YN + +D+ L+ MY + G +E
Sbjct: 468 GIKPNQVTFVGVLSACSHAGLADEALYYFELMQKQ-YNIKPVMDHFACLIDMYLRLGRVE 526
Query: 284 LARRVFDAV----LEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTL 339
A FD V E + +W+ +I G G ++LLK ++P + +L
Sbjct: 527 EA---FDVVHKMNFEPNETIWSMLIAGCRSHGKSDLGFYAAEQLLK--LKPKDVETYVSL 581
>gi|255577487|ref|XP_002529622.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223530907|gb|EEF32767.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 752
Score = 343 bits (881), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 200/614 (32%), Positives = 326/614 (53%), Gaps = 16/614 (2%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+I+ + F+ S M + G + N T ++L+AC++ + G+++H V+K G
Sbjct: 139 LIKGYLEDNDFQSAFSIAGDMHKFGENFNEHTCTVILQACSSPDDRILGEQIHCFVIKSG 198
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F ++ FV T LI MY+K F + KV D M + + N +I + RA +AI V
Sbjct: 199 FDENVFVGTSLIAMYTKSGFFDVAEKVFDSMG--FKDIRCLNFMILEYGRAGNGGKAIEV 256
Query: 121 LKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
K + G E + TF +++S C+ +G + +K G L+ E + N++++MY
Sbjct: 257 FKNLLNDGFEPTDYTFTNIISTCNGDLGVEEGKQLQGLAFKYGFLS-ETSVGNAIITMYG 315
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVG----NVNEAFGLCNQMRRMSVTPDLV 232
G EA +F + E +++SWT +I GY G V+ GL +++ + D
Sbjct: 316 NSGMPKEAERMFSSMSEKNLISWTALISGYSRSGYGKKAVDAFLGLHDEL---GINFDST 372
Query: 233 VFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAV 292
+ ++ C+ NL L L +H ++K G + + LV +Y KC L+ AR VFD +
Sbjct: 373 LLTAILDCCSDCNNLELGLQIHGFVMKLGCACDVNVATALVDLYAKCEKLQSARIVFDHL 432
Query: 293 LEKSVFLWTSMIGGYAQL-GYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKG 351
K + + +++ G+ + G + + LF +L V+P+ T + LS A SL KG
Sbjct: 433 SNKGIASFNAILAGFLESSGDEEDPMILFNQLRLAGVKPDMVTFSRLLSLLANQASLEKG 492
Query: 352 KEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIH 411
+ Y V G ++N V S+I M++KCG I A ++F + +D W+A+I+ YA+H
Sbjct: 493 RSFHAYTVKTGFDTNISVANSVISMYAKCGSIEDAHQMFNIMNCRDSISWNALISAYALH 552
Query: 412 GMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIE 471
G ++L LF +M+ +G PD +IL AC++SG+ DG+ F M+ +GI+P +E
Sbjct: 553 GQAQKSLFLFEEMKR-KGFDPDEFTILAILQACTYSGLWKDGICLFNLMEPKYGIKPLLE 611
Query: 472 HYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTL 531
HY C+ DLLGRAG A+ I P +W L++ C H N+ G+ A+K+LL L
Sbjct: 612 HYACMADLLGRAGYLSEAMDIIKRSPFPKSTLLWRTLVNVCKLHGNLNFGKLASKHLLDL 671
Query: 532 NPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRS 591
+P G+YIL++N++ S M EAA R +M+D + KE G S +EID V FVA D+
Sbjct: 672 SPVEAGSYILVSNMYASEKMSDEAAKVRKVMNDLKFRKEAGSSWIEIDNKVHHFVASDKD 731
Query: 592 HHLSVDIRKTLKEL 605
H S +I L+ L
Sbjct: 732 HPESREIYTRLELL 745
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 125/526 (23%), Positives = 246/526 (46%), Gaps = 17/526 (3%)
Query: 49 GKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAH 108
G+ VHS+++K G Q D F ++++Y K + ++KV D M R R+ ++W S+I +
Sbjct: 86 GQAVHSYLVKAGSQDDTFKGNNVLNLYVKFNRLDLAQKVFDRM--RTRNTITWTSLIKGY 143
Query: 109 SRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCSFRQ----GISMHCCVYKLGLLNNE 164
A + +M G + T ++ CS G +HC V K G N
Sbjct: 144 LEDNDFQSAFSIAGDMHKFGENFNEHTCTVILQACSSPDDRILGEQIHCFVIKSGFDEN- 202
Query: 165 IPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRR 224
+ + S+++MY K G + A +FD +G I +I Y GN +A + +
Sbjct: 203 VFVGTSLIAMYTKSGFFDVAEKVFDSMGFKDIRCLNFMILEYGRAGNGGKAIEVFKNLLN 262
Query: 225 MSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLEL 284
P F N+I C + + L K G+ +E + N +++MY G +
Sbjct: 263 DGFEPTDYTFTNIISTCNGDLGVEEGKQLQGLAFKYGFLSETSVGNAIITMYGNSGMPKE 322
Query: 285 ARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLL-KTSVRPNEATLATTLSACA 343
A R+F ++ EK++ WT++I GY++ GY +AV+ F L + + + L L C+
Sbjct: 323 AERMFSSMSEKNLISWTALISGYSRSGYGKKAVDAFLGLHDELGINFDSTLLTAILDCCS 382
Query: 344 ELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSA 403
+ +L G +I +++ G + V T+L+ +++KC ++ A+ VF+ + +K +A ++A
Sbjct: 383 DCNNLELGLQIHGFVMKLGCACDVNVATALVDLYAKCEKLQSARIVFDHLSNKGIASFNA 442
Query: 404 MINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSN 463
++ G+ ++ + + + G+KPD V ++ +LS ++ ++ G S F +
Sbjct: 443 ILAGFLESSGDEEDPMILFNQLRLAGVKPDMVTFSRLLSLLANQASLEKGRS-FHAYTVK 501
Query: 464 FGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEY 523
G + +I ++ + + G + A + + M + W L+SA H + +
Sbjct: 502 TGFDTNISVANSVISMYAKCGSIEDAHQMFNIMNCR-DSISWNALISAYALHGQAQKSLF 560
Query: 524 AAKNLLT--LNPGSTGNYILMANL--FTSAGMWKEAATARGLMDDR 565
+ + +P + ++A L T +G+WK+ LM+ +
Sbjct: 561 LFEEMKRKGFDPDE---FTILAILQACTYSGLWKDGICLFNLMEPK 603
Score = 145 bits (367), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 83/311 (26%), Positives = 161/311 (51%), Gaps = 3/311 (0%)
Query: 145 FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIG 204
F G ++H + K G ++ N+V+++Y KF +++ A+ +FD + + ++WT++I
Sbjct: 83 FLLGQAVHSYLVKAGSQDDTFK-GNNVLNLYVKFNRLDLAQKVFDRMRTRNTITWTSLIK 141
Query: 205 GYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNN 264
GY+ + AF + M + + ++ C+ + L +H ++KSG++
Sbjct: 142 GYLEDNDFQSAFSIAGDMHKFGENFNEHTCTVILQACSSPDDRILGEQIHCFVIKSGFDE 201
Query: 265 EDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLL 324
+ L++MYTK G ++A +VFD++ K + MI Y + G +A+ +FK LL
Sbjct: 202 NVFVGTSLIAMYTKSGFFDVAEKVFDSMGFKDIRCLNFMILEYGRAGNGGKAIEVFKNLL 261
Query: 325 KTSVRPNEATLATTLSAC-AELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRI 383
P + T +S C +LG + +GK+++ G S V ++I M+ G
Sbjct: 262 NDGFEPTDYTFTNIISTCNGDLG-VEEGKQLQGLAFKYGFLSETSVGNAIITMYGNSGMP 320
Query: 384 NKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSA 443
+A+ +F + +K+L W+A+I+GY+ G G +A++ F + G+ D+ + T+IL
Sbjct: 321 KEAERMFSSMSEKNLISWTALISGYSRSGYGKKAVDAFLGLHDELGINFDSTLLTAILDC 380
Query: 444 CSHSGMVDDGL 454
CS ++ GL
Sbjct: 381 CSDCNNLELGL 391
Score = 102 bits (253), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 113/208 (54%), Gaps = 1/208 (0%)
Query: 246 NLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIG 305
+ L ++HS L+K+G ++ N ++++Y K L+LA++VFD + ++ WTS+I
Sbjct: 82 DFLLGQAVHSYLVKAGSQDDTFKGNNVLNLYVKFNRLDLAQKVFDRMRTRNTITWTSLIK 141
Query: 306 GYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLES 365
GY + A ++ + K NE T L AC+ G++I +++ +G +
Sbjct: 142 GYLEDNDFQSAFSIAGDMHKFGENFNEHTCTVILQACSSPDDRILGEQIHCFVIKSGFDE 201
Query: 366 NRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQ 425
N V TSLI M++K G + A++VF+ + KD+ + MI Y G G +A+ +F +
Sbjct: 202 NVFVGTSLIAMYTKSGFFDVAEKVFDSMGFKDIRCLNFMILEYGRAGNGGKAIEVFKNLL 261
Query: 426 HVEGLKPDAVVYTSILSACSHSGMVDDG 453
+ +G +P +T+I+S C+ V++G
Sbjct: 262 N-DGFEPTDYTFTNIISTCNGDLGVEEG 288
>gi|359482011|ref|XP_002276416.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g11460-like [Vitis vinifera]
Length = 629
Score = 343 bits (881), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 185/515 (35%), Positives = 296/515 (57%), Gaps = 8/515 (1%)
Query: 97 SVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCSFRQ----GISMH 152
+ SWN+ + +R EA+ + +M G +A TF C+ G +H
Sbjct: 20 TTASWNARLRELARQRHFQEALNLYCQMLASGDSPNAFTFPFAFKSCASLSLPLAGSQLH 79
Query: 153 CCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETS--IVSWTTIIGGYVNVG 210
V K G E + S++SMY K + AR +FDE + V + +I GY
Sbjct: 80 GHVIKTGC-EPEPFVQTSLISMYCKCSTIASARKVFDENHHSRNLAVCYNALIAGYSLNS 138
Query: 211 NVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDN 270
++A L QMR+ V+ + V L LI CA +L S+H+ ++ G + + + N
Sbjct: 139 RFSDAVLLFRQMRKEGVSVNAVTMLGLIPVCAGPIHLGFGTSLHACSVRFGLDGDLSVGN 198
Query: 271 LLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRP 330
L++MY +CG ++ AR++FD + EK + W +MI GYAQ G ++L++++ T + P
Sbjct: 199 CLLTMYVRCGSVDFARKLFDGMPEKGLITWNAMISGYAQNGLAGHVLDLYRKMEFTGIVP 258
Query: 331 NEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVF 390
+ TL LS+CA LG+ + G+E+E+ I L+G N ++ +LI+M+++CG + KA+ +F
Sbjct: 259 DPVTLVGVLSSCAHLGAHAAGREVEQRIELSGFGFNPFLKNALINMYARCGNLVKARAIF 318
Query: 391 ERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMV 450
+ + +K++ W+A+I GY +HG G+ A+ LF +M + L PD + S+LSACSH+G+
Sbjct: 319 DGMTEKNVISWTAIIAGYGMHGQGELAVQLFDEMISSDEL-PDGAAFVSVLSACSHAGLT 377
Query: 451 DDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLS 510
+ GL +F +M+ ++G++P EHY C+VDLLGRAGR + A K I M VE VW LL
Sbjct: 378 EKGLYYFTAMERDYGLQPGPEHYSCVVDLLGRAGRLEEARKLIGSMSVEPDGAVWGALLG 437
Query: 511 ACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKE 570
AC H NVEL E A + ++ P + G Y+L++N+F+ AG + R +M +R+L KE
Sbjct: 438 ACKIHRNVELAELAFEKVIEFEPTNIGYYVLLSNIFSEAGNMEGILRVRVMMRERKLKKE 497
Query: 571 PGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKEL 605
PG S VE G + +F+AGDR+H + +I L L
Sbjct: 498 PGCSYVEYQGRIHLFLAGDRTHPQAQEIYHMLDGL 532
Score = 235 bits (599), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 135/449 (30%), Positives = 231/449 (51%), Gaps = 14/449 (3%)
Query: 2 IRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGF 61
+R F+E L+ Y ML +G N+FTFP K+CA+++ G ++H HV+K G
Sbjct: 28 LRELARQRHFQEALNLYCQMLASGDSPNAFTFPFAFKSCASLSLPLAGSQLHGHVIKTGC 87
Query: 62 QQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVL 121
+ + FVQT LI MY KCS S+RKV DE V +N++I+ +S +A+L+
Sbjct: 88 EPEPFVQTSLISMYCKCSTIASARKVFDENHHSRNLAVCYNALIAGYSLNSRFSDAVLLF 147
Query: 122 KEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAK 177
++M G+ ++A T + ++ C+ G S+H C + G L+ ++ + N +++MY +
Sbjct: 148 RQMRKEGVSVNAVTMLGLIPVCAGPIHLGFGTSLHACSVRFG-LDGDLSVGNCLLTMYVR 206
Query: 178 FGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNL 237
G V+ AR +FD + E +++W +I GY G L +M + PD V + +
Sbjct: 207 CGSVDFARKLFDGMPEKGLITWNAMISGYAQNGLAGHVLDLYRKMEFTGIVPDPVTLVGV 266
Query: 238 ILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSV 297
+ CA +G + + SG+ L N L++MY +CG+L AR +FD + EK+V
Sbjct: 267 LSSCAHLGAHAAGREVEQRIELSGFGFNPFLKNALINMYARCGNLVKARAIFDGMTEKNV 326
Query: 298 FLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEY 357
WT++I GY G AV LF ++ + P+ A + LSAC+ G KG + +
Sbjct: 327 ISWTAIIAGYGMHGQGELAVQLFDEMISSDELPDGAAFVSVLSACSHAGLTEKG--LYYF 384
Query: 358 IVLN---GLESNRQVQTSLIHMFSKCGRINKAKEVFERVP-DKDLAVWSAMINGYAIHGM 413
+ GL+ + + ++ + + GR+ +A+++ + + D AVW A++ IH
Sbjct: 385 TAMERDYGLQPGPEHYSCVVDLLGRAGRLEEARKLIGSMSVEPDGAVWGALLGACKIHRN 444
Query: 414 GDQALNLFYKMQHVEGLKPDAVVYTSILS 442
+ A F K+ E P + Y +LS
Sbjct: 445 VELAELAFEKVIEFE---PTNIGYYVLLS 470
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 90/331 (27%), Positives = 155/331 (46%), Gaps = 7/331 (2%)
Query: 193 ETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALS 252
+ + SW + + EA L QM +P+ F CA +
Sbjct: 18 QNTTASWNARLRELARQRHFQEALNLYCQMLASGDSPNAFTFPFAFKSCASLSLPLAGSQ 77
Query: 253 MHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS--VFLWTSMIGGYAQL 310
+H ++K+G E + L+SMY KC + AR+VFD + ++I GY+
Sbjct: 78 LHGHVIKTGCEPEPFVQTSLISMYCKCSTIASARKVFDENHHSRNLAVCYNALIAGYSLN 137
Query: 311 GYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQ 370
S+AV LF+++ K V N T+ + CA L G + V GL+ + V
Sbjct: 138 SRFSDAVLLFRQMRKEGVSVNAVTMLGLIPVCAGPIHLGFGTSLHACSVRFGLDGDLSVG 197
Query: 371 TSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGL 430
L+ M+ +CG ++ A+++F+ +P+K L W+AMI+GYA +G+ L+L+ KM+ G+
Sbjct: 198 NCLLTMYVRCGSVDFARKLFDGMPEKGLITWNAMISGYAQNGLAGHVLDLYRKMEFT-GI 256
Query: 431 KPDAVVYTSILSACSHSGMVDDGLSFFKSMQ-SNFGIEPSIEHYLCLVDLLGRAGRFDLA 489
PD V +LS+C+H G G + ++ S FG P +++ L+++ R G +
Sbjct: 257 VPDPVTLVGVLSSCAHLGAHAAGREVEQRIELSGFGFNPFLKN--ALINMYARCGNL-VK 313
Query: 490 LKTIHEMPVEVQAQVWAPLLSACMKHHNVEL 520
+ I + E W +++ H EL
Sbjct: 314 ARAIFDGMTEKNVISWTAIIAGYGMHGQGEL 344
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 78/311 (25%), Positives = 149/311 (47%), Gaps = 9/311 (2%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+I + N F + + + M + GV N+ T ++ CA + G +H+ ++ G
Sbjct: 130 LIAGYSLNSRFSDAVLLFRQMRKEGVSVNAVTMLGLIPVCAGPIHLGFGTSLHACSVRFG 189
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
D V L+ MY +C +RK+ D MP + +++WN++IS +++ L + +
Sbjct: 190 LDGDLSVGNCLLTMYVRCGSVDFARKLFDGMPE--KGLITWNAMISGYAQNGLAGHVLDL 247
Query: 121 LKEMWVLGLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
++M G+ T V V+S C + G + + G N L N++++MYA
Sbjct: 248 YRKMEFTGIVPDPVTLVGVLSSCAHLGAHAAGREVEQRIELSGFGFNPF-LKNALINMYA 306
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
+ G + +AR+IFD + E +++SWT II GY G A L ++M PD F++
Sbjct: 307 RCGNLVKARAIFDGMTEKNVISWTAIIAGYGMHGQGELAVQLFDEMISSDELPDGAAFVS 366
Query: 237 LILGCAQVGNLFLALSMHSLLLKS-GYNNEDPLDNLLVSMYTKCGDLELARRVFDAV-LE 294
++ C+ G L + + + G + +V + + G LE AR++ ++ +E
Sbjct: 367 VLSACSHAGLTEKGLYYFTAMERDYGLQPGPEHYSCVVDLLGRAGRLEEARKLIGSMSVE 426
Query: 295 KSVFLWTSMIG 305
+W +++G
Sbjct: 427 PDGAVWGALLG 437
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 108/221 (48%), Gaps = 5/221 (2%)
Query: 293 LEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGK 352
L+ + W + + A+ + EA+NL+ ++L + PN T +CA L G
Sbjct: 17 LQNTTASWNARLRELARQRHFQEALNLYCQMLASGDSPNAFTFPFAFKSCASLSLPLAGS 76
Query: 353 EIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVF-ERVPDKDLAV-WSAMINGYAI 410
++ +++ G E VQTSLI M+ KC I A++VF E ++LAV ++A+I GY++
Sbjct: 77 QLHGHVIKTGCEPEPFVQTSLISMYCKCSTIASARKVFDENHHSRNLAVCYNALIAGYSL 136
Query: 411 HGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSI 470
+ A+ LF +M+ EG+ +AV ++ C+ + G S + FG++ +
Sbjct: 137 NSRFSDAVLLFRQMRK-EGVSVNAVTMLGLIPVCAGPIHLGFGTS-LHACSVRFGLDGDL 194
Query: 471 EHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSA 511
CL+ + R G D A K MP E W ++S
Sbjct: 195 SVGNCLLTMYVRCGSVDFARKLFDGMP-EKGLITWNAMISG 234
>gi|356558231|ref|XP_003547411.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Glycine max]
Length = 1135
Score = 343 bits (881), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 200/644 (31%), Positives = 337/644 (52%), Gaps = 36/644 (5%)
Query: 11 FEE---TLSTYSSMLQTGVHGNSFTFPLVLKACANINS-IWDGKRVHSHVLKVGFQQDAF 66
FEE +L + ML V SFT V AC+++ + GK+VH++ L+ G +
Sbjct: 411 FEEWELSLHLFRLMLSENVDPTSFTLVSVAHACSHVRGGVRLGKQVHAYTLRNG-DLRTY 469
Query: 67 VQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWV 126
L+ MY++ ++ + + +VSWN++IS+ S+ +EA++ + M V
Sbjct: 470 TNNALVTMYARLGRVNDAKALFGVFDGK--DLVSWNTVISSLSQNDRFEEALMYVYLMIV 527
Query: 127 LGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVN 182
G+ T SV+ CS R G +HC + G L + +++ MY +
Sbjct: 528 DGVRPDGVTLASVLPACSQLERLRIGREIHCYALRNGDLIENSFVGTALVDMYCNCKQPK 587
Query: 183 EARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMS-VTPDLVVFLNLILGC 241
+ R +FD + ++ W ++ GY ++A L +M S P+ F +++ C
Sbjct: 588 KGRLVFDGVVRRTVAVWNALLAGYARNEFDDQALRLFVEMISESEFCPNATTFASVLPAC 647
Query: 242 AQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWT 301
+ +H ++K G+ + + N L+ MY++ G +E+++ +F + ++ + W
Sbjct: 648 VRCKVFSDKEGIHGYIVKRGFGKDKYVQNALMDMYSRMGRVEISKTIFGRMNKRDIVSWN 707
Query: 302 SMIGGYAQLGYPSEAVNLFKRLLK------------------TSVRPNEATLATTLSACA 343
+MI G G +A+NL + + +PN TL T L CA
Sbjct: 708 TMITGCIVCGRYDDALNLLHEMQRRQGEDGSDTFVDYEDDGGVPFKPNSVTLMTVLPGCA 767
Query: 344 ELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSA 403
L +L KGKEI Y V L + V ++L+ M++KCG +N A VF+++P +++ W+
Sbjct: 768 ALAALGKGKEIHAYAVKQKLAMDVAVGSALVDMYAKCGCLNLASRVFDQMPIRNVITWNV 827
Query: 404 MINGYAIHGMGDQALNLFYKM-----QHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFK 458
+I Y +HG G++AL LF M + E ++P+ V Y +I +ACSHSGMVD+GL F
Sbjct: 828 LIMAYGMHGKGEEALELFRIMTAGGGSNREVIRPNEVTYIAIFAACSHSGMVDEGLHLFH 887
Query: 459 SMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEV-QAQVWAPLLSACMKHHN 517
+M+++ G+EP +HY CLVDLLGR+GR A + I+ MP + + W+ LL AC H +
Sbjct: 888 TMKASHGVEPRGDHYACLVDLLGRSGRVKEAYELINTMPSNLNKVDAWSSLLGACRIHQS 947
Query: 518 VELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVE 577
VE GE AAK+L L P +Y+LM+N+++SAG+W +A R M + + KEPG S +E
Sbjct: 948 VEFGEIAAKHLFVLEPNVASHYVLMSNIYSSAGLWDQALGVRKKMKEMGVRKEPGCSWIE 1007
Query: 578 IDGSVQVFVAGDRSHHLSVDIRKTLKELHIKLLEAGYIAEADIV 621
V F++GD SH S ++ + L+ L ++ + GY+ + V
Sbjct: 1008 HGDEVHKFLSGDASHPQSKELHEYLETLSQRMRKEGYVPDISCV 1051
Score = 246 bits (627), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 167/590 (28%), Positives = 294/590 (49%), Gaps = 35/590 (5%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
++R+ T++ SF + +STY++ML ++F FP VLKA A ++ + GK++H+HV K G
Sbjct: 301 LLRSQTHSSSFRDAISTYAAMLAAPAPPDNFAFPAVLKAAAAVHDLCLGKQIHAHVFKFG 360
Query: 61 FQQDAFVQTG--LIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAI 118
+ V L++MY KC D ++R+V D++P R VSWNS+I+ R + ++
Sbjct: 361 HAPPSSVAVANSLVNMYGKCGDLTAARQVFDDIPD--RDHVSWNSMIATLCRFEEWELSL 418
Query: 119 LVLKEMWVLGLELSASTFVSVVSGCS-FRQGISMHCCVYKLGLLNNEIPLA--NSVMSMY 175
+ + M ++ ++ T VSV CS R G+ + V+ L N ++ N++++MY
Sbjct: 419 HLFRLMLSENVDPTSFTLVSVAHACSHVRGGVRLGKQVHAYTLRNGDLRTYTNNALVTMY 478
Query: 176 AKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFL 235
A+ G+VN+A+++F +VSW T+I EA M V PD V
Sbjct: 479 ARLGRVNDAKALFGVFDGKDLVSWNTVISSLSQNDRFEEALMYVYLMIVDGVRPDGVTLA 538
Query: 236 NLILGCAQVGNLFLALSMHSLLLKSGYNNEDP-LDNLLVSMYTKCGDLELARRVFDAVLE 294
+++ C+Q+ L + +H L++G E+ + LV MY C + R VFD V+
Sbjct: 539 SVLPACSQLERLRIGREIHCYALRNGDLIENSFVGTALVDMYCNCKQPKKGRLVFDGVVR 598
Query: 295 KSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTS-VRPNEATLATTLSACAELGSLSKGKE 353
++V +W +++ GYA+ + +A+ LF ++ S PN T A+ L AC S +
Sbjct: 599 RTVAVWNALLAGYARNEFDDQALRLFVEMISESEFCPNATTFASVLPACVRCKVFSDKEG 658
Query: 354 IEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGM 413
I YIV G ++ VQ +L+ M+S+ GR+ +K +F R+ +D+ W+ MI G + G
Sbjct: 659 IHGYIVKRGFGKDKYVQNALMDMYSRMGRVEISKTIFGRMNKRDIVSWNTMITGCIVCGR 718
Query: 414 GDQALNLFYKMQHVEG-----------------LKPDAVVYTSILSACSHSGMVDDGLSF 456
D ALNL ++MQ +G KP++V ++L C+ + G
Sbjct: 719 YDDALNLLHEMQRRQGEDGSDTFVDYEDDGGVPFKPNSVTLMTVLPGCAALAALGKGKEI 778
Query: 457 FK-SMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKH 515
+++ ++ ++ LVD+ + G +LA + +MP+ W L+ A H
Sbjct: 779 HAYAVKQKLAMDVAVGS--ALVDMYAKCGCLNLASRVFDQMPIR-NVITWNVLIMAYGMH 835
Query: 516 HNVELGEYAAKNLLTLNPGSTGNY-ILMANLFTSAGMWKEAATARGLMDD 564
GE A + + G N ++ N T ++ A + G++D+
Sbjct: 836 GK---GEEALELFRIMTAGGGSNREVIRPNEVTYIAIFA-ACSHSGMVDE 881
>gi|449453035|ref|XP_004144264.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g69350, mitochondrial-like [Cucumis sativus]
Length = 804
Score = 343 bits (881), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 193/589 (32%), Positives = 309/589 (52%), Gaps = 9/589 (1%)
Query: 8 NGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFV 67
NG E L + M+ G +S V++AC + + K H ++LK G + D FV
Sbjct: 178 NGEINEGLDAFRCMVSEGGTPDSVLVLTVVEACGELGVLRLAKSAHGYILKRGIENDRFV 237
Query: 68 QTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVL 127
+ LI MY+KC S+ V + V RS +W ++IS+++ EA+ + M
Sbjct: 238 DSSLIFMYAKCGSLRSAEIVFEN--VTYRSTSTWTAMISSYNLGGYLKEALALFVSMQKT 295
Query: 128 GLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNE 183
+E ++ T ++ C+ R+G S+HC V K L N L +++ +YA K +
Sbjct: 296 EVEPNSVTMRIILRSCTNLSLLREGKSVHCVVIKNDLDANLDCLGPTLLELYAATAKHDL 355
Query: 184 ARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQ 243
I EIG I W T+I Y G + E L +M++ PD + +
Sbjct: 356 CEKILHEIGGRGIAVWNTLISVYAQKGLLKETVDLFVRMQKQGFMPDSFSLASSLSASGN 415
Query: 244 VGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSM 303
G L L L +H ++K + +E N L++MY+KCG ++LA +FD + K V W SM
Sbjct: 416 EGELQLGLQIHGHVIKRPFMDEYVF-NSLINMYSKCGYVDLAYMIFDQMEPKGVVTWNSM 474
Query: 304 IGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGL 363
I G +Q GY ++A++LF + T E + + AC+ LG L KGK I ++ G+
Sbjct: 475 ISGLSQNGYSTKAISLFDLMYVTCPEIGEVAFVSVIQACSHLGFLEKGKWIHHKLITCGV 534
Query: 364 ESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYK 423
++T+L+ M++KCG + A+ VF+ + ++ + WS++I+ Y +HG + + LF K
Sbjct: 535 RKCIFIETALVDMYAKCGDLQTAQRVFDNMSERSVVSWSSLISSYGVHGQISEVIFLFSK 594
Query: 424 MQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRA 483
M G+KP+ V ++LSACSH+G V +G+ FF SM+ +FGIEP EH++C+VDLL RA
Sbjct: 595 MLE-SGIKPNDVTVMNVLSACSHAGCVKEGMLFFNSMR-DFGIEPKREHFVCIVDLLSRA 652
Query: 484 GRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMA 543
G D A + I MP A +W LL+ C H +++ + + L + TG+Y L++
Sbjct: 653 GDLDEAYEIIKLMPFPPGASIWGALLNGCRIHQRMDIAKNIQRELWNIQTDDTGHYTLLS 712
Query: 544 NLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSH 592
N++ + G W E R +M L K P +S VE+ F AGD S+
Sbjct: 713 NIYAAGGEWNEFGEVRSMMKGTGLKKVPAYSVVELGKKAYRFGAGDASY 761
Score = 206 bits (523), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 152/523 (29%), Positives = 262/523 (50%), Gaps = 12/523 (2%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
++++ NG ++E +S Y ML + NS+TFP VL+AC+ + G+RVH ++K G
Sbjct: 70 LLKSHVWNGCYQEAISLYHQMLSQQIQANSYTFPSVLRACSGFGDLGVGQRVHGRIIKSG 129
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F D V T L+ +Y + S+RKV EMP LR +VSW+SIIS+ +E +
Sbjct: 130 FDMDPVVNTALLSVYGELGYLDSARKVFGEMP--LRDLVSWSSIISSVVENGEINEGLDA 187
Query: 121 LKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
+ M G + ++VV C R S H + K G+ N+ + +S++ MYA
Sbjct: 188 FRCMVSEGGTPDSVLVLTVVEACGELGVLRLAKSAHGYILKRGIENDRF-VDSSLIFMYA 246
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K G + A +F+ + S +WT +I Y G + EA L M++ V P+ V
Sbjct: 247 KCGSLRSAEIVFENVTYRSTSTWTAMISSYNLGGYLKEALALFVSMQKTEVEPNSVTMRI 306
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYN-NEDPLDNLLVSMYTKCGDLELARRVFDAVLEK 295
++ C + L S+H +++K+ + N D L L+ +Y +L ++ + +
Sbjct: 307 ILRSCTNLSLLREGKSVHCVVIKNDLDANLDCLGPTLLELYAATAKHDLCEKILHEIGGR 366
Query: 296 SVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIE 355
+ +W ++I YAQ G E V+LF R+ K P+ +LA++LSA G L G +I
Sbjct: 367 GIAVWNTLISVYAQKGLLKETVDLFVRMQKQGFMPDSFSLASSLSASGNEGELQLGLQIH 426
Query: 356 EYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGD 415
+++ + V SLI+M+SKCG ++ A +F+++ K + W++MI+G + +G
Sbjct: 427 GHVIKRPF-MDEYVFNSLINMYSKCGYVDLAYMIFDQMEPKGVVTWNSMISGLSQNGYST 485
Query: 416 QALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLC 475
+A++LF + +V + V + S++ ACSH G ++ G + G+ I
Sbjct: 486 KAISLF-DLMYVTCPEIGEVAFVSVIQACSHLGFLEKG-KWIHHKLITCGVRKCIFIETA 543
Query: 476 LVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNV 518
LVD+ + G A + M E W+ L+S+ H +
Sbjct: 544 LVDMYAKCGDLQTAQRVFDNMS-ERSVVSWSSLISSYGVHGQI 585
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 132/454 (29%), Positives = 225/454 (49%), Gaps = 17/454 (3%)
Query: 51 RVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSR 110
++H+H++ D T LI+ YS+ D SS V W ++ +H
Sbjct: 19 QLHAHIIVTALHNDPLPSTKLIESYSQLGDLQSSTSVFRTF--HSPDSFMWGVLLKSHVW 76
Query: 111 ACLNDEAILVLKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIP 166
EAI + +M ++ ++ TF SV+ CS G +H + K G + P
Sbjct: 77 NGCYQEAISLYHQMLSQQIQANSYTFPSVLRACSGFGDLGVGQRVHGRIIKSGF--DMDP 134
Query: 167 LANS-VMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRM 225
+ N+ ++S+Y + G ++ AR +F E+ +VSW++II V G +NE M
Sbjct: 135 VVNTALLSVYGELGYLDSARKVFGEMPLRDLVSWSSIISSVVENGEINEGLDAFRCMVSE 194
Query: 226 SVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELA 285
TPD V+ L ++ C ++G L LA S H +LK G N+ +D+ L+ MY KCG L A
Sbjct: 195 GGTPDSVLVLTVVEACGELGVLRLAKSAHGYILKRGIENDRFVDSSLIFMYAKCGSLRSA 254
Query: 286 RRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAEL 345
VF+ V +S WT+MI Y GY EA+ LF + KT V PN T+ L +C L
Sbjct: 255 EIVFENVTYRSTSTWTAMISSYNLGGYLKEALALFVSMQKTEVEPNSVTMRIILRSCTNL 314
Query: 346 GSLSKGKEIEEYIVLNGLESNRQ-VQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAM 404
L +GK + ++ N L++N + +L+ +++ + + +++ + + +AVW+ +
Sbjct: 315 SLLREGKSVHCVVIKNDLDANLDCLGPTLLELYAATAKHDLCEKILHEIGGRGIAVWNTL 374
Query: 405 INGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNF 464
I+ YA G+ + ++LF +MQ +G PD+ S LSA + G + GL + +
Sbjct: 375 ISVYAQKGLLKETVDLFVRMQK-QGFMPDSFSLASSLSASGNEGELQLGL----QIHGHV 429
Query: 465 GIEPSIEHYL--CLVDLLGRAGRFDLALKTIHEM 496
P ++ Y+ L+++ + G DLA +M
Sbjct: 430 IKRPFMDEYVFNSLINMYSKCGYVDLAYMIFDQM 463
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 106/390 (27%), Positives = 196/390 (50%), Gaps = 22/390 (5%)
Query: 144 SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTII 203
+ R +H + L N+ +P + ++ Y++ G + + S+F W ++
Sbjct: 13 TLRTLAQLHAHIIVTALHNDPLP-STKLIESYSQLGDLQSSTSVFRTFHSPDSFMWGVLL 71
Query: 204 GGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYN 263
+V G EA L +QM + + F +++ C+ G+L + +H ++KSG++
Sbjct: 72 KSHVWNGCYQEAISLYHQMLSQQIQANSYTFPSVLRACSGFGDLGVGQRVHGRIIKSGFD 131
Query: 264 NEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRL 323
+ ++ L+S+Y + G L+ AR+VF + + + W+S+I + G +E ++ F+ +
Sbjct: 132 MDPVVNTALLSVYGELGYLDSARKVFGEMPLRDLVSWSSIISSVVENGEINEGLDAFRCM 191
Query: 324 LKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRI 383
+ P+ + T + AC ELG L K YI+ G+E++R V +SLI M++KCG +
Sbjct: 192 VSEGGTPDSVLVLTVVEACGELGVLRLAKSAHGYILKRGIENDRFVDSSLIFMYAKCGSL 251
Query: 384 NKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSA 443
A+ VFE V + + W+AMI+ Y + G +AL LF MQ E ++P++V IL +
Sbjct: 252 RSAEIVFENVTYRSTSTWTAMISSYNLGGYLKEALALFVSMQKTE-VEPNSVTMRIILRS 310
Query: 444 CSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLC----LVDLLGRAGRFDLALKTIHEMPVE 499
C++ ++ +G S + N ++ +++ C L++L + DL K +HE+
Sbjct: 311 CTNLSLLREGKSVHCVVIKN-DLDANLD---CLGPTLLELYAATAKHDLCEKILHEIGGR 366
Query: 500 VQAQVWAPLLSACMKHHNVELGEYAAKNLL 529
A VW L+S YA K LL
Sbjct: 367 GIA-VWNTLISV-----------YAQKGLL 384
>gi|449489376|ref|XP_004158293.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g69350, mitochondrial-like
[Cucumis sativus]
Length = 804
Score = 343 bits (881), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 193/589 (32%), Positives = 309/589 (52%), Gaps = 9/589 (1%)
Query: 8 NGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFV 67
NG E L + M+ G +S V++AC + + K H ++LK G + D FV
Sbjct: 178 NGEINEGLDAFRCMVSEGGTPDSVLVLTVVEACGELGVLRLAKSAHGYILKRGIENDRFV 237
Query: 68 QTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVL 127
+ LI MY+KC S+ V + V RS +W ++IS+++ EA+ + M
Sbjct: 238 DSSLIFMYAKCGSLRSAEIVFEN--VTYRSTSTWTAMISSYNLGGYLKEALALFVSMQKT 295
Query: 128 GLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNE 183
+E ++ T ++ C+ R+G S+HC V K L N L +++ +YA K +
Sbjct: 296 EVEPNSVTMRIILRSCTNLSLLREGKSVHCVVIKNDLDANLDCLGPTLLELYAATAKHDL 355
Query: 184 ARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQ 243
I EIG I W T+I Y G + E L +M++ PD + +
Sbjct: 356 CEKILHEIGGRGIAVWNTLISVYAQKGLLKETVDLFVRMQKQGFMPDSFSLASSLSASGN 415
Query: 244 VGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSM 303
G L L L +H ++K + +E N L++MY+KCG ++LA +FD + K V W SM
Sbjct: 416 EGELQLGLQIHGHVIKRPFMDEYVF-NSLINMYSKCGYVDLAYMIFDQMEPKGVVTWNSM 474
Query: 304 IGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGL 363
I G +Q GY ++A++LF + T E + + AC+ LG L KGK I ++ G+
Sbjct: 475 ISGLSQNGYSTKAISLFDLMYVTCPEIGEVAFVSVIQACSHLGFLEKGKWIHHKLITCGV 534
Query: 364 ESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYK 423
++T+L+ M++KCG + A+ VF+ + ++ + WS++I+ Y +HG + + LF K
Sbjct: 535 RKCIFIETALVDMYAKCGDLQTAQRVFDNMSERSVVSWSSLISSYGVHGQISEVIFLFSK 594
Query: 424 MQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRA 483
M G+KP+ V ++LSACSH+G V +G+ FF SM+ +FGIEP EH++C+VDLL RA
Sbjct: 595 MLE-SGIKPNDVTVMNVLSACSHAGCVKEGMLFFNSMR-DFGIEPKREHFVCIVDLLSRA 652
Query: 484 GRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMA 543
G D A + I MP A +W LL+ C H +++ + + L + TG+Y L++
Sbjct: 653 GDLDEAYEIIKLMPFPPGASIWGALLNGCRIHQRMDIAKNIQRELWNIQTDDTGHYTLLS 712
Query: 544 NLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSH 592
N++ + G W E R +M L K P +S VE+ F AGD S+
Sbjct: 713 NIYAAGGEWNEFGEVRSMMKGTGLKKVPAYSVVELGKKAYRFGAGDASY 761
Score = 205 bits (522), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 152/523 (29%), Positives = 262/523 (50%), Gaps = 12/523 (2%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
++++ NG ++E +S Y ML + NS+TFP VL+AC+ + G+RVH ++K G
Sbjct: 70 LLKSHVWNGCYQEAISLYHQMLSQQIQANSYTFPSVLRACSGFGDLGVGQRVHGRIIKSG 129
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F D V T L+ +Y + S+RKV EMP LR +VSW+SIIS+ +E +
Sbjct: 130 FDMDPVVNTALLSVYGELGYLDSARKVFGEMP--LRDLVSWSSIISSVVENGEINEGLDA 187
Query: 121 LKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
+ M G + ++VV C R S H + K G+ N+ + +S++ MYA
Sbjct: 188 FRCMVSEGGTPDSVLVLTVVEACGELGVLRLAKSAHGYILKRGIENDRF-VDSSLIFMYA 246
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K G + A +F+ + S +WT +I Y G + EA L M++ V P+ V
Sbjct: 247 KCGSLRSAEIVFENVTYRSTSTWTAMISSYNLGGYLKEALALFVSMQKTEVEPNSVTMRI 306
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYN-NEDPLDNLLVSMYTKCGDLELARRVFDAVLEK 295
++ C + L S+H +++K+ + N D L L+ +Y +L ++ + +
Sbjct: 307 ILRSCTNLSLLREGKSVHCVVIKNDLDANLDCLGPTLLELYAATAKHDLCEKILHEIGGR 366
Query: 296 SVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIE 355
+ +W ++I YAQ G E V+LF R+ K P+ +LA++LSA G L G +I
Sbjct: 367 GIAVWNTLISVYAQKGLLKETVDLFVRMQKQGFMPDSFSLASSLSASGNEGELQLGLQIH 426
Query: 356 EYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGD 415
+++ + V SLI+M+SKCG ++ A +F+++ K + W++MI+G + +G
Sbjct: 427 GHVIKRPF-MDEYVFNSLINMYSKCGYVDLAYMIFDQMEPKGVVTWNSMISGLSQNGYST 485
Query: 416 QALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLC 475
+A++LF + +V + V + S++ ACSH G ++ G + G+ I
Sbjct: 486 KAISLF-DLMYVTCPEIGEVAFVSVIQACSHLGFLEKG-KWIHHKLITCGVRKCIFIETA 543
Query: 476 LVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNV 518
LVD+ + G A + M E W+ L+S+ H +
Sbjct: 544 LVDMYAKCGDLQTAQRVFDNMS-ERSVVSWSSLISSYGVHGQI 585
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 132/454 (29%), Positives = 225/454 (49%), Gaps = 17/454 (3%)
Query: 51 RVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSR 110
++H+H++ D T LI+ YS+ D SS V W ++ +H
Sbjct: 19 QLHAHIIVTALHNDPLPSTKLIESYSQLGDLQSSTSVFRTF--HSPDSFMWGVLLKSHVW 76
Query: 111 ACLNDEAILVLKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIP 166
EAI + +M ++ ++ TF SV+ CS G +H + K G + P
Sbjct: 77 NGCYQEAISLYHQMLSQQIQANSYTFPSVLRACSGFGDLGVGQRVHGRIIKSGF--DMDP 134
Query: 167 LANS-VMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRM 225
+ N+ ++S+Y + G ++ AR +F E+ +VSW++II V G +NE M
Sbjct: 135 VVNTALLSVYGELGYLDSARKVFGEMPLRDLVSWSSIISSVVENGEINEGLDAFRCMVSE 194
Query: 226 SVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELA 285
TPD V+ L ++ C ++G L LA S H +LK G N+ +D+ L+ MY KCG L A
Sbjct: 195 GGTPDSVLVLTVVEACGELGVLRLAKSAHGYILKRGIENDRFVDSSLIFMYAKCGSLRSA 254
Query: 286 RRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAEL 345
VF+ V +S WT+MI Y GY EA+ LF + KT V PN T+ L +C L
Sbjct: 255 EIVFENVTYRSTSTWTAMISSYNLGGYLKEALALFVSMQKTEVEPNSVTMRIILRSCTNL 314
Query: 346 GSLSKGKEIEEYIVLNGLESNRQ-VQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAM 404
L +GK + ++ N L++N + +L+ +++ + + +++ + + +AVW+ +
Sbjct: 315 SLLREGKSVHCVVIKNDLDANLDCLGPTLLELYAATAKHDLCEKILHEIGGRGIAVWNTL 374
Query: 405 INGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNF 464
I+ YA G+ + ++LF +MQ +G PD+ S LSA + G + GL + +
Sbjct: 375 ISVYAQKGLLKETVDLFVRMQK-QGFMPDSFSLASSLSASGNEGELQLGL----QIHGHV 429
Query: 465 GIEPSIEHYL--CLVDLLGRAGRFDLALKTIHEM 496
P ++ Y+ L+++ + G DLA +M
Sbjct: 430 IKRPFMDEYVFNSLINMYSKCGYVDLAYMIFDQM 463
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 107/390 (27%), Positives = 197/390 (50%), Gaps = 22/390 (5%)
Query: 144 SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTII 203
+ RQ +H + L N+ +P + ++ Y++ G + + S+F W ++
Sbjct: 13 TLRQLAQLHAHIIVTALHNDPLP-STKLIESYSQLGDLQSSTSVFRTFHSPDSFMWGVLL 71
Query: 204 GGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYN 263
+V G EA L +QM + + F +++ C+ G+L + +H ++KSG++
Sbjct: 72 KSHVWNGCYQEAISLYHQMLSQQIQANSYTFPSVLRACSGFGDLGVGQRVHGRIIKSGFD 131
Query: 264 NEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRL 323
+ ++ L+S+Y + G L+ AR+VF + + + W+S+I + G +E ++ F+ +
Sbjct: 132 MDPVVNTALLSVYGELGYLDSARKVFGEMPLRDLVSWSSIISSVVENGEINEGLDAFRCM 191
Query: 324 LKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRI 383
+ P+ + T + AC ELG L K YI+ G+E++R V +SLI M++KCG +
Sbjct: 192 VSEGGTPDSVLVLTVVEACGELGVLRLAKSAHGYILKRGIENDRFVDSSLIFMYAKCGSL 251
Query: 384 NKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSA 443
A+ VFE V + + W+AMI+ Y + G +AL LF MQ E ++P++V IL +
Sbjct: 252 RSAEIVFENVTYRSTSTWTAMISSYNLGGYLKEALALFVSMQKTE-VEPNSVTMRIILRS 310
Query: 444 CSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLC----LVDLLGRAGRFDLALKTIHEMPVE 499
C++ ++ +G S + N ++ +++ C L++L + DL K +HE+
Sbjct: 311 CTNLSLLREGKSVHCVVIKN-DLDANLD---CLGPTLLELYAATAKHDLCEKILHEIGGR 366
Query: 500 VQAQVWAPLLSACMKHHNVELGEYAAKNLL 529
A VW L+S YA K LL
Sbjct: 367 GIA-VWNTLISV-----------YAQKGLL 384
>gi|224095278|ref|XP_002310370.1| predicted protein [Populus trichocarpa]
gi|222853273|gb|EEE90820.1| predicted protein [Populus trichocarpa]
Length = 711
Score = 343 bits (880), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 197/613 (32%), Positives = 324/613 (52%), Gaps = 13/613 (2%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI +G+ SM + G + +TF +LK A+ G++VHS ++K+G
Sbjct: 73 MITGYVESGNLGAAWEFLKSMKRRGFQADGYTFGSILKGVAHACRHDLGQQVHSLIVKIG 132
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
++Q + + L+DMY+KC + V MPVR + VSWN++I + D A +
Sbjct: 133 YEQSVYAGSALLDMYAKCERVEDAYDVFQGMPVR--NFVSWNALIDGFVQVGDRDTAFWL 190
Query: 121 LKEMWVLGLELSASTF---VSVVSGCSFRQ-GISMHCCVYKLGL-LNNEIPLANSVMSMY 175
L M G+ + TF ++++ G F + + +HC + K GL N L N+ ++ Y
Sbjct: 191 LDCMQKEGVRVEDGTFAPLLTLLDGDKFYKLTMQLHCKIIKHGLEFYN--ALCNATLTAY 248
Query: 176 AKFGKVNEARSIFD-EIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVF 234
++ G + +A+ +FD +G +V+W +++ Y+ +AF L +M+ PD+ +
Sbjct: 249 SECGLLEDAKRVFDGAVGTRDLVTWNSMLVAYLVHDKDEDAFNLFLEMQGFGFEPDIYTY 308
Query: 235 LNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGD--LELARRVFDAV 292
+I C + S H+L++K G + N L++MY K + +E A +F ++
Sbjct: 309 TCVISACFAAAHKNYGKSFHALVIKRGLEESVTICNALITMYLKLNNKSMEAALNLFHSM 368
Query: 293 LEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGK 352
K W S++ G++Q+G+ +A+ LF + + ++ + L +C++L L G+
Sbjct: 369 KSKDRVSWNSILTGFSQMGFSEDALKLFGHMRSSLEEIDDYAYSAVLRSCSDLAILQLGQ 428
Query: 353 EIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHG 412
+I V G +SN V +SLI M+SKCG I A + FE + W++++ YA HG
Sbjct: 429 QIHLLTVKTGFDSNDFVASSLIFMYSKCGIIEDAWKCFEDTTKESSITWNSIMFAYAQHG 488
Query: 413 MGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEH 472
GD AL+LF M+ E +K D V + ++L+ACSH G+V+ G KSM+S++GI P +EH
Sbjct: 489 QGDVALDLFSIMRERE-VKLDHVTFVAVLTACSHVGLVEQGRCVLKSMESDYGIPPRMEH 547
Query: 473 YLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLN 532
Y C VDL GRAG + A I MP + A V LL AC N+EL A LL +
Sbjct: 548 YACAVDLFGRAGYLEEAKALIDSMPFQPNAMVLKTLLGACRACGNIELAAQVASQLLEVE 607
Query: 533 PGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSH 592
P Y++++N++ W + A+ LM +R++ K PGWS +E+ V F A DRSH
Sbjct: 608 PEEHCTYVILSNMYGHLKRWDDKASVTRLMRERKVKKVPGWSWIEVKNEVHAFKAEDRSH 667
Query: 593 HLSVDIRKTLKEL 605
S D+ + L EL
Sbjct: 668 PYSEDVYQILGEL 680
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 98/322 (30%), Positives = 162/322 (50%), Gaps = 6/322 (1%)
Query: 152 HCCVYKLGLLNNEIPLANSVMSMYAKF--GKVNEARSIFDEIGETSIVSWTTIIGGYVNV 209
HC +K G++++ I +AN+++ Y+K G +N A +FDE+ V+W T+I GYV
Sbjct: 22 HCQAFKSGIISH-IYVANNILFRYSKCFSGDLNLACKLFDEMPHKDTVTWNTMITGYVES 80
Query: 210 GNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLD 269
GN+ A+ M+R D F +++ G A L +HSL++K GY
Sbjct: 81 GNLGAAWEFLKSMKRRGFQADGYTFGSILKGVAHACRHDLGQQVHSLIVKIGYEQSVYAG 140
Query: 270 NLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVR 329
+ L+ MY KC +E A VF + ++ W ++I G+ Q+G A L + K VR
Sbjct: 141 SALLDMYAKCERVEDAYDVFQGMPVRNFVSWNALIDGFVQVGDRDTAFWLLDCMQKEGVR 200
Query: 330 PNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEV 389
+ T A L+ ++ I+ +GLE + + + +S+CG + AK V
Sbjct: 201 VEDGTFAPLLTLLDGDKFYKLTMQLHCKIIKHGLEFYNALCNATLTAYSECGLLEDAKRV 260
Query: 390 FE-RVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSG 448
F+ V +DL W++M+ Y +H + A NLF +MQ G +PD YT ++SAC +
Sbjct: 261 FDGAVGTRDLVTWNSMLVAYLVHDKDEDAFNLFLEMQGF-GFEPDIYTYTCVISACFAAA 319
Query: 449 MVDDGLSFFKSMQSNFGIEPSI 470
+ G S F ++ G+E S+
Sbjct: 320 HKNYGKS-FHALVIKRGLEESV 340
>gi|347954526|gb|AEP33763.1| organelle transcript processing 82, partial [Isatis tinctoria]
Length = 671
Score = 343 bits (880), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 191/558 (34%), Positives = 313/558 (56%), Gaps = 39/558 (6%)
Query: 101 WNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGC----SFRQGISMHCCVY 156
WN++I H+ + ++ + M LGL ++ TF ++ C +F +G +H V
Sbjct: 32 WNTMIRGHALSSDPVSSLTLYVCMVSLGLLPNSYTFPFLLKSCAKSKTFTEGQQIHGQVL 91
Query: 157 KLGLLNNEIPLANSVMSMY-------------------------------AKFGKVNEAR 185
KLG + ++ + S++SMY A G + A+
Sbjct: 92 KLGF-DLDLYVHTSLISMYVQNWRLEDAYKVFDRSSHRDVVSYTALITGYASRGDIRSAQ 150
Query: 186 SIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVG 245
+FDEI +VSW +I GY G EA L +M +M+V PD ++ ++ CA G
Sbjct: 151 KLFDEIPVKDVVSWNAMISGYAETGCYKEALELFEEMMKMNVRPDESTYVTVLSACAHSG 210
Query: 246 NLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIG 305
++ L +HS + G+++ + N L+ +Y+KCG++E A +F + K V W ++IG
Sbjct: 211 SIELGRQVHSWVDDHGFDSNLKIVNALIDLYSKCGEVETACGLFQGLSYKDVISWNTLIG 270
Query: 306 GYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYI--VLNGL 363
GY + EA+ LF+ +L++ PN+ T+ + L ACA LG++ G+ I YI L G+
Sbjct: 271 GYTHMNLYKEALLLFQEMLRSGETPNDVTMLSVLPACAHLGAIDIGRWIHVYIDKRLKGV 330
Query: 364 ESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYK 423
+ ++TSLI M++KCG I A +VF + K L+ W+AMI G+A+HG D + +LF +
Sbjct: 331 TNASSLRTSLIDMYAKCGDIEAAHQVFNSMLHKSLSSWNAMIFGFAMHGRADASFDLFSR 390
Query: 424 MQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRA 483
M+ + G++PD + + +LSACSHSGM+D G F+SM ++ + P +EHY C++DLLG +
Sbjct: 391 MRKI-GIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTQDYKMTPKLEHYGCMIDLLGHS 449
Query: 484 GRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMA 543
G F A + I+ M +E +W LL AC H NVEL E A+NL+ + P + +YIL++
Sbjct: 450 GLFKEAEEMINTMEMEPDGVIWCSLLKACKMHGNVELAESFAQNLIKIEPENPSSYILLS 509
Query: 544 NLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLK 603
N++ SAG W++ A R L++ + + K PG S +E+D V FV GD+ H + +I L+
Sbjct: 510 NIYASAGRWEDVARIRALLNGKCMKKVPGCSSIEVDSVVFEFVVGDKFHPQNREIYGMLE 569
Query: 604 ELHIKLLEAGYIAEADIV 621
E+ + L EAG++ + V
Sbjct: 570 EMEVLLEEAGFVPDTSEV 587
Score = 224 bits (572), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 159/552 (28%), Positives = 260/552 (47%), Gaps = 90/552 (16%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MIR + +L+ Y M+ G+ NS+TFP +LK+CA + +G+++H VLK+G
Sbjct: 35 MIRGHALSSDPVSSLTLYVCMVSLGLLPNSYTFPFLLKSCAKSKTFTEGQQIHGQVLKLG 94
Query: 61 FQQDAFVQTGLIDM-------------------------------YSKCSDFVSSRKVLD 89
F D +V T LI M Y+ D S++K+ D
Sbjct: 95 FDLDLYVHTSLISMYVQNWRLEDAYKVFDRSSHRDVVSYTALITGYASRGDIRSAQKLFD 154
Query: 90 EMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGC----SF 145
E+PV + VVSWN++IS ++ EA+ + +EM + + ST+V+V+S C S
Sbjct: 155 EIPV--KDVVSWNAMISGYAETGCYKEALELFEEMMKMNVRPDESTYVTVLSACAHSGSI 212
Query: 146 RQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGG 205
G +H V G +N + + N+++ +Y+K G+V A +F + ++SW T+IGG
Sbjct: 213 ELGRQVHSWVDDHGFDSN-LKIVNALIDLYSKCGEVETACGLFQGLSYKDVISWNTLIGG 271
Query: 206 YVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLK--SGYN 263
Y ++ EA L +M R TP+ V L+++ CA +G + + +H + K G
Sbjct: 272 YTHMNLYKEALLLFQEMLRSGETPNDVTMLSVLPACAHLGAIDIGRWIHVYIDKRLKGVT 331
Query: 264 NEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRL 323
N L L+ MY KCGD+E A +VF+++L KS+ W +MI G+A G + +LF R+
Sbjct: 332 NASSLRTSLIDMYAKCGDIEAAHQVFNSMLHKSLSSWNAMIFGFAMHGRADASFDLFSRM 391
Query: 324 LKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRI 383
K + P++ T LSAC+ G L G+ I + + ++ L H
Sbjct: 392 RKIGIEPDDITFVGLLSACSHSGMLDLGRHI-----FRSMTQDYKMTPKLEH-------- 438
Query: 384 NKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSA 443
+ MI+ G+ +A + M+ ++PD V++ S+L A
Sbjct: 439 -----------------YGCMIDLLGHSGLFKEAEEMINTME----MEPDGVIWCSLLKA 477
Query: 444 CSHSGMVDDGLSFFKSMQSNFGIEP-SIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQA 502
C G V+ SF Q+ IEP + Y+ L ++ AGR+ E A
Sbjct: 478 CKMHGNVELAESF---AQNLIKIEPENPSSYILLSNIYASAGRW------------EDVA 522
Query: 503 QVWAPLLSACMK 514
++ A L CMK
Sbjct: 523 RIRALLNGKCMK 534
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 96/351 (27%), Positives = 167/351 (47%), Gaps = 33/351 (9%)
Query: 178 FGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNL 237
F + A S+F+ I E + + W T+I G+ + + L M + + P+ F L
Sbjct: 11 FDGLPYATSVFETIQEPNQLIWNTMIRGHALSSDPVSSLTLYVCMVSLGLLPNSYTFPFL 70
Query: 238 ILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSV 297
+ CA+ +H +LK G++ + + L+SMY + LE A +VFD + V
Sbjct: 71 LKSCAKSKTFTEGQQIHGQVLKLGFDLDLYVHTSLISMYVQNWRLEDAYKVFDRSSHRDV 130
Query: 298 FLWTSMIGG-------------------------------YAQLGYPSEAVNLFKRLLKT 326
+T++I G YA+ G EA+ LF+ ++K
Sbjct: 131 VSYTALITGYASRGDIRSAQKLFDEIPVKDVVSWNAMISGYAETGCYKEALELFEEMMKM 190
Query: 327 SVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKA 386
+VRP+E+T T LSACA GS+ G+++ ++ +G +SN ++ +LI ++SKCG + A
Sbjct: 191 NVRPDESTYVTVLSACAHSGSIELGRQVHSWVDDHGFDSNLKIVNALIDLYSKCGEVETA 250
Query: 387 KEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSH 446
+F+ + KD+ W+ +I GY + +AL LF +M G P+ V S+L AC+H
Sbjct: 251 CGLFQGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLR-SGETPNDVTMLSVLPACAH 309
Query: 447 SGMVDDGLSFFKSMQSNF-GIEPSIEHYLCLVDLLGRAGRFDLALKTIHEM 496
G +D G + G+ + L+D+ + G + A + + M
Sbjct: 310 LGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSM 360
>gi|449444600|ref|XP_004140062.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g17210-like [Cucumis sativus]
Length = 747
Score = 343 bits (880), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 212/634 (33%), Positives = 344/634 (54%), Gaps = 25/634 (3%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
M+ + +NGS L + N + LV++A + G H ++ + G
Sbjct: 119 MVHGNFSNGSIMAGLCWFIKGRFAHFQPNISSLLLVIQAFRELKIYSQGFAFHGYIFRSG 178
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F VQ L+ +Y++ + + K+ EM VR VVSW+ +I + +++ L+
Sbjct: 179 FSAILSVQNSLLSLYAEVHMYFA-HKLFGEMSVR-NDVVSWSVMIGGFVQIGEDEQGFLM 236
Query: 121 LKEMWV-LGLELSASTFVSVVSGCSFRQGISMHCCVYKLGL---LNNEIPLANSVMSMYA 176
+ M G+ T VSV+ C+ + IS+ V+ L + L +++ + NS++ MY+
Sbjct: 237 FRNMVTEAGIPPDGVTVVSVLKACTNLKDISLGTMVHGLVIFRGLEDDLFVGNSLIDMYS 296
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K V+ A F EI E +I+SW ++ Y+ + EA L M R D V N
Sbjct: 297 KCFNVHSAFKAFKEIPEKNIISWNLMLSAYILNESHLEALALLGTMVREGAEKDEVTLAN 356
Query: 237 LILGCAQVGNLFL----ALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAV 292
++ Q+ FL S+H ++++ GY + + L N ++ Y KC +ELAR VFD +
Sbjct: 357 VL----QIAKHFLDSLKCRSVHGVIIRKGYESNELLLNSVIDAYAKCNLVELARMVFDGM 412
Query: 293 LEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGK 352
+K V W++MI G+A+ G P EA+++FK++ V PN ++ + ACA L + K
Sbjct: 413 NKKDVVAWSTMIAGFARNGKPDEAISVFKQM-NEEVIPNNVSIMNLMEACAVSAELRQSK 471
Query: 353 EIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHG 412
V GL S + TS+I M+SKCG I + F ++P K++ WSAMI+ + I+G
Sbjct: 472 WAHGIAVRRGLASEVDIGTSIIDMYSKCGDIEASIRAFNQIPQKNVVCWSAMISAFRING 531
Query: 413 MGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEH 472
+ +AL LF K++ G KP+AV S+LSACSH G++++GLSFF SM GIEP +EH
Sbjct: 532 LAHEALMLFEKIKQ-NGTKPNAVTALSLLSACSHGGLMEEGLSFFTSMVQKHGIEPGLEH 590
Query: 473 YLCLVDLLGRAGRFDLALKTIHEMPVEVQ--AQVWAPLLSACMKHHNVELGEYAAKNLLT 530
Y C+VD+L RAG+F+ AL+ I ++P E++ A +W LLS+C + N+ LG AA +L
Sbjct: 591 YSCIVDMLSRAGKFNEALELIEKLPKEMEAGASIWGTLLSSCRSYGNISLGSGAASRVLQ 650
Query: 531 LNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDR 590
L P S+ Y+L +NL+ + G+ ++A R L ++ + G+S V I+ FVAGD
Sbjct: 651 LEPLSSAGYMLASNLYANCGLMIDSAKMRRLAKEKGVKVVAGYSLVHINSQTWRFVAGDV 710
Query: 591 SHHLSVDIRKTLKELH-------IKLLEAGYIAE 617
+ + +I +K+LH +KLL+A + E
Sbjct: 711 LNPRADEIYLMVKKLHGVMKIDCLKLLDALFNVE 744
Score = 178 bits (452), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 127/526 (24%), Positives = 260/526 (49%), Gaps = 34/526 (6%)
Query: 2 IRNSTNNGSFEETLSTYSSMLQTGVH-GNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
I++++ +G+++E L Y + +G +++ P +LKAC+N S G +H ++K G
Sbjct: 19 IKDASYSGNWQEALQLYHEIRISGAQLSDTWVLPSILKACSN-TSFNLGTAMHGCLIKQG 77
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
Q + ID Y K D S+++ D + + VSWN ++ + ++ +I+
Sbjct: 78 CQSSTSIANSTIDFYMKYGDLDSAQRAFD--STKNKDSVSWNVMVHGN----FSNGSIMA 131
Query: 121 LKEMWVLG----LELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVM 172
++ G + + S+ + V+ + QG + H +++ G + + + NS++
Sbjct: 132 GLCWFIKGRFAHFQPNISSLLLVIQAFRELKIYSQGFAFHGYIFRSGF-SAILSVQNSLL 190
Query: 173 SMYAKFGKVNEARSIFDEIG-ETSIVSWTTIIGGYVNVGNVNEAFGLC-NQMRRMSVTPD 230
S+YA+ + A +F E+ +VSW+ +IGG+V +G + F + N + + PD
Sbjct: 191 SLYAEV-HMYFAHKLFGEMSVRNDVVSWSVMIGGFVQIGEDEQGFLMFRNMVTEAGIPPD 249
Query: 231 LVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFD 290
V ++++ C + ++ L +H L++ G ++ + N L+ MY+KC ++ A + F
Sbjct: 250 GVTVVSVLKACTNLKDISLGTMVHGLVIFRGLEDDLFVGNSLIDMYSKCFNVHSAFKAFK 309
Query: 291 AVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSK 350
+ EK++ W M+ Y EA+ L +++ +E TLA L K
Sbjct: 310 EIPEKNIISWNLMLSAYILNESHLEALALLGTMVREGAEKDEVTLANVLQIAKHFLDSLK 369
Query: 351 GKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAI 410
+ + I+ G ESN + S+I ++KC + A+ VF+ + KD+ WS MI G+A
Sbjct: 370 CRSVHGVIIRKGYESNELLLNSVIDAYAKCNLVELARMVFDGMNKKDVVAWSTMIAGFAR 429
Query: 411 HGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDD-----GLSFFKSMQSNFG 465
+G D+A+++F +M E + P+ V +++ AC+ S + G++ + + S
Sbjct: 430 NGKPDEAISVFKQMN--EEVIPNNVSIMNLMEACAVSAELRQSKWAHGIAVRRGLASEVD 487
Query: 466 IEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSA 511
I SI +D+ + G + +++ +++P + W+ ++SA
Sbjct: 488 IGTSI------IDMYSKCGDIEASIRAFNQIP-QKNVVCWSAMISA 526
>gi|224065397|ref|XP_002301797.1| predicted protein [Populus trichocarpa]
gi|222843523|gb|EEE81070.1| predicted protein [Populus trichocarpa]
Length = 602
Score = 343 bits (880), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 195/560 (34%), Positives = 313/560 (55%), Gaps = 9/560 (1%)
Query: 51 RVHSHVLKVG-FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHS 109
++H+ ++ G F ++ +I Y++ S+R + D++P R V +WN++I A+S
Sbjct: 25 QIHALIITTGLFFANSNFNGLVIASYARIGGITSARHLFDKLPQR--GVDAWNAMIVAYS 82
Query: 110 RACLNDEAILVLKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGL---LNNEIP 166
R E + + +M G + +STF + S + + +++ + ++
Sbjct: 83 RRYHLTEVLNLYHQMVNEGGKPDSSTFTVAIKASSSLKDLEAGERIWRRAVDFGYGCDVF 142
Query: 167 LANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMS 226
+ +SV+++Y K GK++EA+ +FD++ + +V W T+I G V GNV EA + +MR+
Sbjct: 143 VGSSVLNLYVKCGKIDEAKLVFDKMVKRDVVCWATMITGLVQNGNVLEAVDMFRRMRKEG 202
Query: 227 VTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDP-LDNLLVSMYTKCGDLELA 285
+ D V+ L L+ CA +G L L LS+H ++ +D L LV MY K GDLELA
Sbjct: 203 IEGDGVLMLGLVQACANLGELKLGLSVHGHAVRREMLMDDVILQTSLVDMYAKIGDLELA 262
Query: 286 RRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAEL 345
RVF+ + K+ W ++I G+AQ G+ A++L + +P+ A L + L AC+++
Sbjct: 263 SRVFEQMPRKNAVSWGALISGFAQNGFAEYALDLLVEMQSLEFKPDTAVLVSALLACSQV 322
Query: 346 GSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMI 405
G L GK I YIV L + T+LI M++KCG ++ A +F+RV +D+ +W+ MI
Sbjct: 323 GHLKLGKSIHGYIV-RRLGFELVLGTALIDMYAKCGSLSCAHAIFDRVDSRDVILWNTMI 381
Query: 406 NGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFG 465
Y IHG G + L+LF KM+ + PD + S+LSA SHSG VD G +F +M +
Sbjct: 382 ASYGIHGDGKEVLSLFLKMKEAN-ISPDHATFASLLSALSHSGQVDVGQYWFNAMVNECK 440
Query: 466 IEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAA 525
I PS +HY C+VDL RAGR + A + I M E +W LLS C + N+ GE AA
Sbjct: 441 IPPSEKHYACMVDLFSRAGRVEEAYQLIESMNTEPGLAIWVALLSGCHNYRNLLFGEVAA 500
Query: 526 KNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVF 585
K +L LNP G Y L++N F+ A MW + R +M + + K PG+S VE++G + F
Sbjct: 501 KKILDLNPDDLGIYALVSNFFSLARMWDRVSILRKIMKETGMKKVPGYSAVEVNGKHEAF 560
Query: 586 VAGDRSHHLSVDIRKTLKEL 605
+ D++HH +I + L L
Sbjct: 561 LVEDKNHHQYEEILQMLDSL 580
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 115/414 (27%), Positives = 213/414 (51%), Gaps = 11/414 (2%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI + E L+ Y M+ G +S TF + +KA +++ + G+R+ + G
Sbjct: 77 MIVAYSRRYHLTEVLNLYHQMVNEGGKPDSSTFTVAIKASSSLKDLEAGERIWRRAVDFG 136
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+ D FV + ++++Y KC ++ V D+M R VV W ++I+ + EA+ +
Sbjct: 137 YGCDVFVGSSVLNLYVKCGKIDEAKLVFDKMVK--RDVVCWATMITGLVQNGNVLEAVDM 194
Query: 121 LKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
+ M G+E + +V C+ + G+S+H + +L +++ L S++ MYA
Sbjct: 195 FRRMRKEGIEGDGVLMLGLVQACANLGELKLGLSVHGHAVRREMLMDDVILQTSLVDMYA 254
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K G + A +F+++ + VSW +I G+ G A L +M+ + PD V ++
Sbjct: 255 KIGDLELASRVFEQMPRKNAVSWGALISGFAQNGFAEYALDLLVEMQSLEFKPDTAVLVS 314
Query: 237 LILGCAQVGNLFLALSMHSLLLKS-GYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEK 295
+L C+QVG+L L S+H +++ G+ E L L+ MY KCG L A +FD V +
Sbjct: 315 ALLACSQVGHLKLGKSIHGYIVRRLGF--ELVLGTALIDMYAKCGSLSCAHAIFDRVDSR 372
Query: 296 SVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIE 355
V LW +MI Y G E ++LF ++ + ++ P+ AT A+ LSA + G + G+
Sbjct: 373 DVILWNTMIASYGIHGDGKEVLSLFLKMKEANISPDHATFASLLSALSHSGQVDVGQYWF 432
Query: 356 EYIVLN-GLESNRQVQTSLIHMFSKCGRINKAKEVFERV-PDKDLAVWSAMING 407
+V + + + ++ +FS+ GR+ +A ++ E + + LA+W A+++G
Sbjct: 433 NAMVNECKIPPSEKHYACMVDLFSRAGRVEEAYQLIESMNTEPGLAIWVALLSG 486
>gi|449523019|ref|XP_004168522.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g17210-like [Cucumis sativus]
Length = 747
Score = 343 bits (880), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 211/629 (33%), Positives = 342/629 (54%), Gaps = 25/629 (3%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
M+ + +NGS L + N + LV++A + G H ++ + G
Sbjct: 119 MVHGNFSNGSIMAGLCWFIKGRFAHFQPNISSLLLVIQAFRELKIYSQGFAFHGYIFRSG 178
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F VQ L+ +Y++ + + K+ EM VR VVSW+ +I + +++ L+
Sbjct: 179 FSAILSVQNSLLSLYAEVHMYFA-YKLFGEMSVR-NDVVSWSVMIGGFVQIGEDEQGFLM 236
Query: 121 LKEMWV-LGLELSASTFVSVVSGCSFRQGISMHCCVYKLGL---LNNEIPLANSVMSMYA 176
+ M G+ T VSV+ C+ + IS+ V+ L + L +++ + NS++ MY+
Sbjct: 237 FRNMVTEAGIPPDGVTVVSVLKACTNLKDISLGTMVHGLVIFRGLEDDLFVGNSLIDMYS 296
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K V+ A F EI E +I+SW ++ Y+ + EA L M R D V N
Sbjct: 297 KCFNVHSAFKAFKEIPEKNIISWNLMLSAYILNESHLEALALLGTMVREGAEKDEVTLAN 356
Query: 237 LILGCAQVGNLFL----ALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAV 292
++ Q+ FL S+H ++++ GY + + L N ++ Y KC +ELAR VFD +
Sbjct: 357 VL----QIAKHFLDSLKCRSVHGVIIRKGYESNELLLNSVIDAYAKCNLVELARMVFDGM 412
Query: 293 LEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGK 352
+K V W++MI G+A+ G P EA+++FK++ V PN ++ + ACA L + K
Sbjct: 413 NKKDVVAWSTMIAGFARNGKPDEAISVFKQM-NEEVIPNNVSIMNLMEACAVSAELRQSK 471
Query: 353 EIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHG 412
V GL S + TS+I M+SKCG I + F ++P K++ WSAMI+ + I+G
Sbjct: 472 WAHGIAVRRGLASEVAIGTSIIDMYSKCGDIEASIRAFNQIPQKNVVCWSAMISAFRING 531
Query: 413 MGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEH 472
+ +AL LF K++ G KP+AV S+LSACSH G++++GLSFF SM GIEP +EH
Sbjct: 532 LAHEALMLFEKIKQ-NGTKPNAVTALSLLSACSHGGLIEEGLSFFTSMVQKHGIEPGLEH 590
Query: 473 YLCLVDLLGRAGRFDLALKTIHEMPVEVQ--AQVWAPLLSACMKHHNVELGEYAAKNLLT 530
Y C+VD+L RAG+F+ AL+ I ++P E++ A +W LLS+C + N+ LG AA +L
Sbjct: 591 YSCIVDMLSRAGKFNEALELIEKLPKEMEAGASIWGTLLSSCRSYGNISLGSGAASRVLQ 650
Query: 531 LNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDR 590
L P S+ Y+L +NL+ + G+ ++A R L ++ + G+S V I+ FVAGD
Sbjct: 651 LEPLSSAGYMLASNLYANCGLMIDSAKMRRLAKEKGVKVVAGYSLVHINSQTWRFVAGDV 710
Query: 591 SHHLSVDIRKTLKELH-------IKLLEA 612
+ + +I +K+LH +KLL+A
Sbjct: 711 LNPRADEIYLMVKKLHGVMKIDCLKLLDA 739
Score = 178 bits (452), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 127/526 (24%), Positives = 260/526 (49%), Gaps = 34/526 (6%)
Query: 2 IRNSTNNGSFEETLSTYSSMLQTGVH-GNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
I++++ +G+++E L Y + +G +++ P +LKAC+N S G +H ++K G
Sbjct: 19 IKDASYSGNWQEALQLYHEIRISGAQLSDTWVLPSILKACSN-TSFNLGTAMHGCLIKQG 77
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
Q + ID Y K D S+++ D + + VSWN ++ + ++ +I+
Sbjct: 78 CQSSTSIANSTIDFYMKYGDLDSAQRAFD--STKNKDSVSWNVMVHGN----FSNGSIMA 131
Query: 121 LKEMWVLG----LELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVM 172
++ G + + S+ + V+ + QG + H +++ G + + + NS++
Sbjct: 132 GLCWFIKGRFAHFQPNISSLLLVIQAFRELKIYSQGFAFHGYIFRSGF-SAILSVQNSLL 190
Query: 173 SMYAKFGKVNEARSIFDEIG-ETSIVSWTTIIGGYVNVGNVNEAFGLC-NQMRRMSVTPD 230
S+YA+ + A +F E+ +VSW+ +IGG+V +G + F + N + + PD
Sbjct: 191 SLYAEV-HMYFAYKLFGEMSVRNDVVSWSVMIGGFVQIGEDEQGFLMFRNMVTEAGIPPD 249
Query: 231 LVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFD 290
V ++++ C + ++ L +H L++ G ++ + N L+ MY+KC ++ A + F
Sbjct: 250 GVTVVSVLKACTNLKDISLGTMVHGLVIFRGLEDDLFVGNSLIDMYSKCFNVHSAFKAFK 309
Query: 291 AVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSK 350
+ EK++ W M+ Y EA+ L +++ +E TLA L K
Sbjct: 310 EIPEKNIISWNLMLSAYILNESHLEALALLGTMVREGAEKDEVTLANVLQIAKHFLDSLK 369
Query: 351 GKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAI 410
+ + I+ G ESN + S+I ++KC + A+ VF+ + KD+ WS MI G+A
Sbjct: 370 CRSVHGVIIRKGYESNELLLNSVIDAYAKCNLVELARMVFDGMNKKDVVAWSTMIAGFAR 429
Query: 411 HGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDD-----GLSFFKSMQSNFG 465
+G D+A+++F +M E + P+ V +++ AC+ S + G++ + + S
Sbjct: 430 NGKPDEAISVFKQMN--EEVIPNNVSIMNLMEACAVSAELRQSKWAHGIAVRRGLASEVA 487
Query: 466 IEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSA 511
I SI +D+ + G + +++ +++P + W+ ++SA
Sbjct: 488 IGTSI------IDMYSKCGDIEASIRAFNQIP-QKNVVCWSAMISA 526
>gi|125551253|gb|EAY96962.1| hypothetical protein OsI_18881 [Oryza sativa Indica Group]
Length = 822
Score = 343 bits (880), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 209/626 (33%), Positives = 345/626 (55%), Gaps = 24/626 (3%)
Query: 6 TNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKAC-ANINSIWDGKRVHSHVLKVG-FQQ 63
NG+ +L ML++G+ N++T AC + G V V K+G +
Sbjct: 127 ARNGAERGSLLLIGEMLESGLLPNAYTLCAAAHACFPHELYCLVGGVVLGLVHKMGLWGT 186
Query: 64 DAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKE 123
D V + LIDM ++ D S+RKV D + + +VV W +IS + + +EA+ + +
Sbjct: 187 DVAVGSALIDMLARNGDLASARKVFDGLIEK--TVVVWTLLISRYVQGECAEEAVELFLD 244
Query: 124 MWVLGLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAK-- 177
G E T S++S C S R G+ +H ++GL ++ ++ ++ MYAK
Sbjct: 245 FLEDGFEPDRYTMSSMISACTELGSVRLGLQLHSLALRMGLASDAC-VSCGLVDMYAKSN 303
Query: 178 FGK-VNEARSIFDEIGETSIVSWTTIIGGYVNVG-NVNEAFGLCNQMRRMSVTPDLVVFL 235
G+ ++ A +F+ + + ++SWT +I GYV G N+ L +M S+ P+ + +
Sbjct: 304 IGQAMDYANKVFERMPKNDVISWTALISGYVQSGVQENKVMALFGEMLNESIKPNHITYS 363
Query: 236 NLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEK 295
+++ CA + + +H+ ++KS + + N LVSMY + G +E ARRVF+ + E+
Sbjct: 364 SILKSCASISDHDSGRQVHAHVIKSNQASAHTVGNALVSMYAESGCMEEARRVFNQLYER 423
Query: 296 SVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIE 355
S+ + +P L R+++ V + +T A+ +SA A +G L+KG+++
Sbjct: 424 SMIPCIT-----EGRDFP-----LDHRIVRMDVGISSSTFASLISAAASVGMLTKGQQLH 473
Query: 356 EYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGD 415
+ G S+R V SL+ M+S+CG + A F + D+++ W++MI+G A HG +
Sbjct: 474 AMSLKAGFGSDRFVSNSLVSMYSRCGYLEDACRSFNELKDRNVISWTSMISGLAKHGYAE 533
Query: 416 QALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLC 475
+AL+LF+ M + G+KP+ V Y ++LSACSH G+V +G +F+SMQ + G+ P +EHY C
Sbjct: 534 RALSLFHDMI-LTGVKPNDVTYIAVLSACSHVGLVREGKEYFRSMQRDHGLIPRMEHYAC 592
Query: 476 LVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGS 535
+VDLL R+G AL+ I+EMP++ A VW LL AC H N+E+GE AKN++ L P
Sbjct: 593 MVDLLARSGIVKEALEFINEMPLKADALVWKTLLGACRSHDNIEVGEITAKNVVELEPRD 652
Query: 536 TGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLS 595
Y+L++NL+ AG+W E A R M D L KE G S +E++ + F AGD SH +
Sbjct: 653 PAPYVLLSNLYADAGLWDEVARIRSAMRDNNLNKETGLSWMEVENTTHEFRAGDTSHPRA 712
Query: 596 VDIRKTLKELHIKLLEAGYIAEADIV 621
DI L L ++ GY+ + IV
Sbjct: 713 QDIYGKLDTLVRQIKGMGYVPDTSIV 738
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 137/551 (24%), Positives = 255/551 (46%), Gaps = 55/551 (9%)
Query: 49 GKRVHSHVLKVGF-QQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISA 107
G+ +H +L+ +DA V L+ +YS+C S+R V D M LR +VSW ++ S
Sbjct: 67 GRALHRRLLRGDLLDRDAVVANSLLTLYSRCGAVASARNVFDGMR-GLRDIVSWTAMASC 125
Query: 108 HSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCSFRQGISMHC--------CVYKLG 159
+R ++L++ EM GL +A T + C + ++C V+K+G
Sbjct: 126 LARNGAERGSLLLIGEMLESGLLPNAYTLCAAAHACFPHE---LYCLVGGVVLGLVHKMG 182
Query: 160 LLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLC 219
L ++ + ++++ M A+ G + AR +FD + E ++V WT +I YV EA L
Sbjct: 183 LWGTDVAVGSALIDMLARNGDLASARKVFDGLIEKTVVVWTLLISRYVQGECAEEAVELF 242
Query: 220 NQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKC 279
PD ++I C ++G++ L L +HSL L+ G ++ + LV MY K
Sbjct: 243 LDFLEDGFEPDRYTMSSMISACTELGSVRLGLQLHSLALRMGLASDACVSCGLVDMYAKS 302
Query: 280 G---DLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAV-NLFKRLLKTSVRPNEATL 335
++ A +VF+ + + V WT++I GY Q G V LF +L S++PN T
Sbjct: 303 NIGQAMDYANKVFERMPKNDVISWTALISGYVQSGVQENKVMALFGEMLNESIKPNHITY 362
Query: 336 ATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPD 395
++ L +CA + G+++ +++ + S V +L+ M+++ G + +A+ VF ++ +
Sbjct: 363 SSILKSCASISDHDSGRQVHAHVIKSNQASAHTVGNALVSMYAESGCMEEARRVFNQLYE 422
Query: 396 KDL-------------------------AVWSAMINGYAIHGMGDQALNLFYKMQHVEGL 430
+ + + ++++I+ A GM + L + M G
Sbjct: 423 RSMIPCITEGRDFPLDHRIVRMDVGISSSTFASLISAAASVGMLTKGQQL-HAMSLKAGF 481
Query: 431 KPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLAL 490
D V S++S S G ++D F ++ + ++ + ++ L + G + AL
Sbjct: 482 GSDRFVSNSLVSMYSRCGYLEDACRSFNELK-----DRNVISWTSMISGLAKHGYAERAL 536
Query: 491 KTIHEM---PVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLT---LNPGSTGNYILMAN 544
H+M V+ + +LSAC V G+ +++ L P +Y M +
Sbjct: 537 SLFHDMILTGVKPNDVTYIAVLSACSHVGLVREGKEYFRSMQRDHGLIP-RMEHYACMVD 595
Query: 545 LFTSAGMWKEA 555
L +G+ KEA
Sbjct: 596 LLARSGIVKEA 606
Score = 145 bits (365), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 95/319 (29%), Positives = 166/319 (52%), Gaps = 14/319 (4%)
Query: 145 FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEI-GETSIVSWTTII 203
R G ++H + + LL+ + +ANS++++Y++ G V AR++FD + G IVSWT +
Sbjct: 64 LRLGRALHRRLLRGDLLDRDAVVANSLLTLYSRCGAVASARNVFDGMRGLRDIVSWTAMA 123
Query: 204 GGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQ-----VGNLFLALSMHSLLL 258
G + L +M + P+ C + + +H + L
Sbjct: 124 SCLARNGAERGSLLLIGEMLESGLLPNAYTLCAAAHACFPHELYCLVGGVVLGLVHKMGL 183
Query: 259 KSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVN 318
+ + + + L+ M + GDL AR+VFD ++EK+V +WT +I Y Q EAV
Sbjct: 184 ---WGTDVAVGSALIDMLARNGDLASARKVFDGLIEKTVVVWTLLISRYVQGECAEEAVE 240
Query: 319 LFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFS 378
LF L+ P+ T+++ +SAC ELGS+ G ++ + GL S+ V L+ M++
Sbjct: 241 LFLDFLEDGFEPDRYTMSSMISACTELGSVRLGLQLHSLALRMGLASDACVSCGLVDMYA 300
Query: 379 KCG---RINKAKEVFERVPDKDLAVWSAMINGYAIHGMGD-QALNLFYKMQHVEGLKPDA 434
K ++ A +VFER+P D+ W+A+I+GY G+ + + + LF +M + E +KP+
Sbjct: 301 KSNIGQAMDYANKVFERMPKNDVISWTALISGYVQSGVQENKVMALFGEMLN-ESIKPNH 359
Query: 435 VVYTSILSACSHSGMVDDG 453
+ Y+SIL +C+ D G
Sbjct: 360 ITYSSILKSCASISDHDSG 378
Score = 41.2 bits (95), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 26/108 (24%), Positives = 53/108 (49%), Gaps = 2/108 (1%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKV- 59
MI +G E LS + M+ TGV N T+ VL AC+++ + +GK + +
Sbjct: 522 MISGLAKHGYAERALSLFHDMILTGVKPNDVTYIAVLSACSHVGLVREGKEYFRSMQRDH 581
Query: 60 GFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISA 107
G ++D+ ++ + + ++EMP++ ++V W +++ A
Sbjct: 582 GLIPRMEHYACMVDLLARSGIVKEALEFINEMPLKADALV-WKTLLGA 628
>gi|225470674|ref|XP_002269391.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Vitis vinifera]
Length = 587
Score = 343 bits (880), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 189/579 (32%), Positives = 327/579 (56%), Gaps = 12/579 (2%)
Query: 32 TFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEM 91
T +L C+ ++ G +H+ VLK G Q D F+ +++MY+KC +R+V DEM
Sbjct: 5 TLSSLLHHCSKTKALRCGLSLHAAVLKTGTQSDVFMSNHVLNMYAKCGHTTFARQVFDEM 64
Query: 92 PVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCSFRQGISM 151
+++VSW+++IS + +A AI + +M+++ E F SV+S C+ +++
Sbjct: 65 --FEKNLVSWSAMISGYDQAGEPQMAIDLYSQMFLVPNEY---VFASVISACASLSAVTL 119
Query: 152 ----HCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYV 207
H K G + ++NS++SMY K + ++A S+F E + VS+ +I G+V
Sbjct: 120 GQKIHSRSLKFGYESISF-VSNSLISMYMKCNQCSDALSVFTNTPEPNCVSYNALITGFV 178
Query: 208 NVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDP 267
+ MR+ + PD F+ ++ C NL +H +K ++
Sbjct: 179 ENQQLERGLEFFKLMRQQGLIPDRFAFMGVLGICTTTENLKRGAELHCQTVKLNLDSTPF 238
Query: 268 LDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLK-T 326
+ N++++MY++ ++ A + F + EK V W ++I + ++ + +FK + + T
Sbjct: 239 IGNVIITMYSELNLIQEAEKAFRLIEEKDVISWNTLIAACSHCDDHAKGLRVFKHMTEET 298
Query: 327 SVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKA 386
+VRP++ T + L+ACA L S+S GK+I +++ L + V +L++M++KCG I A
Sbjct: 299 NVRPDDFTFTSALAACAGLASMSHGKQIHAHLMRTRLYQDLGVGNALVNMYAKCGCIGYA 358
Query: 387 KEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSH 446
++F ++ +L W+ +I G+ HG+G++A+ LF +M + G++PD+V + +L+AC+H
Sbjct: 359 YDIFSKMVHHNLVSWNTIIAGFGNHGLGERAVELFEQM-NASGIRPDSVTFIGLLTACNH 417
Query: 447 SGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWA 506
+G+VD G +F SM+ +GI P IEH+ CL+D+LGRAGR + A + + + P V
Sbjct: 418 AGLVDKGQLYFNSMEETYGIAPDIEHFSCLIDMLGRAGRLNEAEEYMRKFPFWNDPVVLV 477
Query: 507 PLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRR 566
LLSA H +V +GE AK LL L P +T Y+L++NL+ S GMW A AR +
Sbjct: 478 SLLSASRLHGDVVIGERLAKWLLKLQPVTTSPYVLLSNLYASDGMWDSVAEARKRLKGSG 537
Query: 567 LTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKEL 605
L KEPG S +E++GSV+ F GD +H +I+ LK L
Sbjct: 538 LKKEPGHSLIEVNGSVEKFTIGDFTHLRIKEIKGILKTL 576
Score = 165 bits (418), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 114/441 (25%), Positives = 210/441 (47%), Gaps = 24/441 (5%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI G + + YS M N + F V+ ACA+++++ G+++HS LK G
Sbjct: 75 MISGYDQAGEPQMAIDLYSQMFLVP---NEYVFASVISACASLSAVTLGQKIHSRSLKFG 131
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
++ +FV LI MY KC+ + V P + VS+N++I+ + +
Sbjct: 132 YESISFVSNSLISMYMKCNQCSDALSVFTNTPE--PNCVSYNALITGFVENQQLERGLEF 189
Query: 121 LKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIP-LANSVMSMY 175
K M GL F+ V+ C+ ++G +HC KL L + P + N +++MY
Sbjct: 190 FKLMRQQGLIPDRFAFMGVLGICTTTENLKRGAELHCQTVKLNL--DSTPFIGNVIITMY 247
Query: 176 AKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQM-RRMSVTPDLVVF 234
++ + EA F I E ++SW T+I + + + + M +V PD F
Sbjct: 248 SELNLIQEAEKAFRLIEEKDVISWNTLIAACSHCDDHAKGLRVFKHMTEETNVRPDDFTF 307
Query: 235 LNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLE 294
+ + CA + ++ +H+ L+++ + + N LV+MY KCG + A +F ++
Sbjct: 308 TSALAACAGLASMSHGKQIHAHLMRTRLYQDLGVGNALVNMYAKCGCIGYAYDIFSKMVH 367
Query: 295 KSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGK-- 352
++ W ++I G+ G AV LF+++ + +RP+ T L+AC G + KG+
Sbjct: 368 HNLVSWNTIIAGFGNHGLGERAVELFEQMNASGIRPDSVTFIGLLTACNHAGLVDKGQLY 427
Query: 353 --EIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPD-KDLAVWSAMINGYA 409
+EE G+ + + + LI M + GR+N+A+E + P D V ++++
Sbjct: 428 FNSMEETY---GIAPDIEHFSCLIDMLGRAGRLNEAEEYMRKFPFWNDPVVLVSLLSASR 484
Query: 410 IHG---MGDQALNLFYKMQHV 427
+HG +G++ K+Q V
Sbjct: 485 LHGDVVIGERLAKWLLKLQPV 505
>gi|115468242|ref|NP_001057720.1| Os06g0506100 [Oryza sativa Japonica Group]
gi|52075894|dbj|BAD45840.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113595760|dbj|BAF19634.1| Os06g0506100 [Oryza sativa Japonica Group]
Length = 766
Score = 343 bits (879), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 199/623 (31%), Positives = 335/623 (53%), Gaps = 10/623 (1%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+I NG + L +SSML++G + F ++AC + + G++VH+H LK
Sbjct: 123 VIAAHVQNGRAGDALGLFSSMLRSGTAADQFALGSAVRACTELGDVGTGRQVHAHALKSE 182
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
D VQ L+ MYSK + V +L E ++ + ++SW SII+ ++ EA+ V
Sbjct: 183 RGSDLIVQNALVTMYSK-NGLVDDGFMLFER-IKDKDLISWGSIIAGFAQQGFEMEALQV 240
Query: 121 LKEMWVLGLELSAS-TFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMY 175
+EM V G F S C S+ G +H K L+ ++ + S+ MY
Sbjct: 241 FREMIVEGSHHPNEFHFGSAFRACGAVGSWEYGEQIHGLSIKY-RLDRDLYVGCSLSDMY 299
Query: 176 AKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFL 235
A+ ++ AR F I +VSW +I+ Y G ++EA L ++MR + PD +
Sbjct: 300 ARCKNLDSARVAFYRIEAPDLVSWNSIVNAYSVEGLLSEALVLFSEMRDSGLRPDGITVR 359
Query: 236 NLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEK 295
L+ C L+ +HS L+K G + + + N L+SMY +C DL A VF + ++
Sbjct: 360 GLLCACVGRDALYHGRLIHSYLVKLGLDGDVSVCNSLLSMYARCSDLSSAMDVFHEIKDQ 419
Query: 296 SVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIE 355
V W S++ AQ +P E + LF L K+ + +L LSA AELG K++
Sbjct: 420 DVVTWNSILTACAQHNHPEEVLKLFSLLNKSEPSLDRISLNNVLSASAELGYFEMVKQVH 479
Query: 356 EYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPD-KDLAVWSAMINGYAIHGMG 414
Y GL +R + +LI ++KCG ++ A +FE + + +D+ WS++I GYA G
Sbjct: 480 AYAFKAGLVDDRMLSNTLIDTYAKCGSLDDAMRLFEIMGNNRDVFSWSSLIVGYAQFGYA 539
Query: 415 DQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYL 474
+A +LF +M+ + G++P+ V + +L+ACS G V++G ++ M+ +GI P+ EH
Sbjct: 540 KEAFDLFSRMRSL-GIRPNHVTFIGVLTACSRVGFVNEGCYYYSIMEPEYGIVPTREHCS 598
Query: 475 CLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPG 534
C+VDLL RAG+ A I +MP E +W LL+A H+++E+G+ AA+ +L ++P
Sbjct: 599 CIVDLLARAGKLTEAANFIDQMPFEPDIIMWKTLLAASKMHNDMEMGKRAAEGILNIDPS 658
Query: 535 STGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHL 594
+ Y+L+ N++ ++G W E A + M + K PG S V++ G ++VF+ DRSH
Sbjct: 659 HSAAYVLLCNIYAASGNWNEFARLKKAMRTSGVKKSPGKSWVKLKGELKVFIVEDRSHPE 718
Query: 595 SVDIRKTLKELHIKLLEAGYIAE 617
S +I L+ + +++++AGY+ +
Sbjct: 719 SEEIYAMLELIGMEMIKAGYVPK 741
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 111/410 (27%), Positives = 202/410 (49%), Gaps = 11/410 (2%)
Query: 167 LANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMS 226
L N +++MY + + AR +FDE+ + VSW ++I +V G +A GL + M R
Sbjct: 88 LGNHLITMYGRCAAPDSARQVFDEMPARNPVSWASVIAAHVQNGRAGDALGLFSSMLRSG 147
Query: 227 VTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELAR 286
D + + C ++G++ +H+ LKS ++ + N LV+MY+K G ++
Sbjct: 148 TAADQFALGSAVRACTELGDVGTGRQVHAHALKSERGSDLIVQNALVTMYSKNGLVDDGF 207
Query: 287 RVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLL-KTSVRPNEATLATTLSACAEL 345
+F+ + +K + W S+I G+AQ G+ EA+ +F+ ++ + S PNE + AC +
Sbjct: 208 MLFERIKDKDLISWGSIIAGFAQQGFEMEALQVFREMIVEGSHHPNEFHFGSAFRACGAV 267
Query: 346 GSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMI 405
GS G++I + L+ + V SL M+++C ++ A+ F R+ DL W++++
Sbjct: 268 GSWEYGEQIHGLSIKYRLDRDLYVGCSLSDMYARCKNLDSARVAFYRIEAPDLVSWNSIV 327
Query: 406 NGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFG 465
N Y++ G+ +AL LF +M+ GL+PD + +L AC + G S G
Sbjct: 328 NAYSVEGLLSEALVLFSEMRD-SGLRPDGITVRGLLCACVGRDALYHG-RLIHSYLVKLG 385
Query: 466 IEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVE----LG 521
++ + L+ + R A+ HE+ + W +L+AC +H++ E L
Sbjct: 386 LDGDVSVCNSLLSMYARCSDLSSAMDVFHEIK-DQDVVTWNSILTACAQHNHPEEVLKLF 444
Query: 522 EYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEA---ATARGLMDDRRLT 568
K+ +L+ S N + + M K+ A GL+DDR L+
Sbjct: 445 SLLNKSEPSLDRISLNNVLSASAELGYFEMVKQVHAYAFKAGLVDDRMLS 494
Score = 172 bits (435), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 129/505 (25%), Positives = 229/505 (45%), Gaps = 49/505 (9%)
Query: 33 FPLVLKACANINSIWDGKRVHSHVL-------KVGFQQDAFVQTGLIDMYSKCSDFVSSR 85
+ ++ AC+ + S+ G+RVH H++ + + LI MY +C+ S+R
Sbjct: 47 YAALVSACSRLRSLPQGRRVHRHLVASSSSSPDAQLAGNTVLGNHLITMYGRCAAPDSAR 106
Query: 86 KVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCS- 144
+V DEMP R+ VSW S+I+AH + +A+ + M G S V C+
Sbjct: 107 QVFDEMPA--RNPVSWASVIAAHVQNGRAGDALGLFSSMLRSGTAADQFALGSAVRACTE 164
Query: 145 ---FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTT 201
G +H K +++ + N++++MY+K G V++ +F+ I + ++SW +
Sbjct: 165 LGDVGTGRQVHAHALK-SERGSDLIVQNALVTMYSKNGLVDDGFMLFERIKDKDLISWGS 223
Query: 202 IIGGYVNVGNVNEAFGLCNQM-RRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKS 260
II G+ G EA + +M S P+ F + C VG+ +H L +K
Sbjct: 224 IIAGFAQQGFEMEALQVFREMIVEGSHHPNEFHFGSAFRACGAVGSWEYGEQIHGLSIKY 283
Query: 261 GYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLF 320
+ + + L MY +C +L+ AR F + + W S++ Y+ G SEA+ LF
Sbjct: 284 RLDRDLYVGCSLSDMYARCKNLDSARVAFYRIEAPDLVSWNSIVNAYSVEGLLSEALVLF 343
Query: 321 KRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKC 380
+ + +RP+ T+ L AC +L G+ I Y+V GL+ + V SL+ M+++C
Sbjct: 344 SEMRDSGLRPDGITVRGLLCACVGRDALYHGRLIHSYLVKLGLDGDVSVCNSLLSMYARC 403
Query: 381 GRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSI 440
++ A +VF + D+D+ W++++ A H ++ L LF + E D + ++
Sbjct: 404 SDLSSAMDVFHEIKDQDVVTWNSILTACAQHNHPEEVLKLFSLLNKSEP-SLDRISLNNV 462
Query: 441 LSACSH----------------SGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAG 484
LSA + +G+VDD M SN L+D + G
Sbjct: 463 LSASAELGYFEMVKQVHAYAFKAGLVDD------RMLSN-----------TLIDTYAKCG 505
Query: 485 RFDLALKTIHEMPVEVQAQVWAPLL 509
D A++ M W+ L+
Sbjct: 506 SLDDAMRLFEIMGNNRDVFSWSSLI 530
>gi|302758642|ref|XP_002962744.1| hypothetical protein SELMODRAFT_78092 [Selaginella moellendorffii]
gi|300169605|gb|EFJ36207.1| hypothetical protein SELMODRAFT_78092 [Selaginella moellendorffii]
Length = 935
Score = 343 bits (879), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 206/641 (32%), Positives = 338/641 (52%), Gaps = 25/641 (3%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHG-NSFTFPLVLKAC--ANINSIWDGKRVHSHVL 57
MI NGS E L + M + G NS TF VL +C A + S+ D + +H ++
Sbjct: 216 MISAFLRNGSAREALQLFRDMDRDGAPPPNSVTFVSVLDSCVEAGLLSLEDVRAIHGRIV 275
Query: 58 KVGFQQDAFVQTGLIDMYSKCSDFVSSRKVL----DEMPVRLRSVVSWNSIISAHSRACL 113
G +++AFV+T L+D Y K + +V DE P S+V+ +++ISA +
Sbjct: 276 GAGIEREAFVRTALVDSYGKLGSLDDAWEVFLRKGDEEPST--SLVTCSAMISACWQNGW 333
Query: 114 NDEAILVLKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGL----LNNEIPLAN 169
E++ + M + G + S T VSV++ CS Q S V + + + L
Sbjct: 334 PQESLRLFFAMNLEGTKPSGVTLVSVLNACSMLQVGSATAFVLEQAMEVVSATRDNVLGT 393
Query: 170 SVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTP 229
++++ YA+ + AR+ FD I +VSW + Y+ EA L +M V P
Sbjct: 394 TLLTTYARSNDLPRARATFDAIQSPDVVSWNAMAAAYLQHHRSREALVLFERMLLEGVRP 453
Query: 230 DLVVFLNLILGCA----QVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELA 285
+ F+ + CA Q + + + SLL ++G + + N ++MY KCG L A
Sbjct: 454 SVATFITALTACAAYPPQTASA-IGKRIQSLLEEAGLEGDTAVANATLNMYAKCGSLADA 512
Query: 286 RRVFDAV--LEKSVFLWTSMIGGYAQLGYPSEAVNLFKRL-LKTSVRPNEATLATTLSAC 342
R VF+ + + W SM+ Y G EA LF+ + + V+PN+ T L A
Sbjct: 513 RAVFERISPARRDCITWNSMLAAYGHHGLGKEAFELFQAMEAEKLVKPNKVTFVAVLDAS 572
Query: 343 AELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVP--DKDLAV 400
S+++G+EI +V NG ES+ +Q +L++M++KCG ++ A+ +F++ +D+
Sbjct: 573 TSRTSIAQGREIHARVVSNGFESDTVIQNALLNMYAKCGSLDDAQAIFDKSSSNQEDVIA 632
Query: 401 WSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSM 460
W+++I GYA +G ++AL LF+ MQ +G++P+ V + S L+AC+H G ++ G M
Sbjct: 633 WTSLIAGYAQYGQAERALKLFWTMQQ-QGVRPNHVTFISALTACNHGGKLEQGCELLSGM 691
Query: 461 QSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVEL 520
+ GI P+ +H+ C+VDLLGR GR D A K + E + W LL AC +E
Sbjct: 692 TPDHGILPASKHFSCIVDLLGRCGRLDEAEKLL-ERTSQADVITWMALLDACKNSKELER 750
Query: 521 GEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDG 580
GE A+ ++ L+P +YI++A+++ +AG W EAAT R M D+ + +PG S VE++
Sbjct: 751 GERCAERIMQLDPEVASSYIVLASMYAAAGRWNEAATIRKTMLDKGIRADPGCSAVEVNQ 810
Query: 581 SVQVFVAGDRSHHLSVDIRKTLKELHIKLLEAGYIAEADIV 621
+ F AGD+SH S +I L+ LH + AGY+A+ +V
Sbjct: 811 ELHSFSAGDKSHPKSEEIYLELERLHWSIKAAGYVADTGLV 851
Score = 201 bits (510), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 147/540 (27%), Positives = 254/540 (47%), Gaps = 28/540 (5%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MIR +G ++ + + M V N ++ AC+ + ++ G+R+HS +
Sbjct: 115 MIRAWMEHGRPDKAMELFDRM---EVRPNCHALIALVNACSCLGNLAAGRRIHSQISDRD 171
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMP-VRLRSVVSWNSIISAHSRACLNDEAIL 119
F++++ + LI MYSKC + +++ D +P R VV+WN++ISA R EA+
Sbjct: 172 FEENSVLGNALISMYSKCGSLIDAKQAFDRLPRASKRDVVTWNAMISAFLRNGSAREALQ 231
Query: 120 VLKEMWVLGLELSAS-TFVSVVSGC------SFRQGISMHCCVYKLGLLNNEIPLANSVM 172
+ ++M G S TFVSV+ C S ++H + G + E + +++
Sbjct: 232 LFRDMDRDGAPPPNSVTFVSVLDSCVEAGLLSLEDVRAIHGRIVGAG-IEREAFVRTALV 290
Query: 173 SMYAKFGKVNEARSIF----DEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVT 228
Y K G +++A +F DE TS+V+ + +I G E+ L M
Sbjct: 291 DSYGKLGSLDDAWEVFLRKGDEEPSTSLVTCSAMISACWQNGWPQESLRLFFAMNLEGTK 350
Query: 229 PDLVVFLNLILGCA--QVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELAR 286
P V ++++ C+ QVG+ A + + ++ L L++ Y + DL AR
Sbjct: 351 PSGVTLVSVLNACSMLQVGSA-TAFVLEQAMEVVSATRDNVLGTTLLTTYARSNDLPRAR 409
Query: 287 RVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELG 346
FDA+ V W +M Y Q EA+ LF+R+L VRP+ AT T L+ACA
Sbjct: 410 ATFDAIQSPDVVSWNAMAAAYLQHHRSREALVLFERMLLEGVRPSVATFITALTACAAYP 469
Query: 347 SLSK---GKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPD--KDLAVW 401
+ GK I+ + GLE + V + ++M++KCG + A+ VFER+ +D W
Sbjct: 470 PQTASAIGKRIQSLLEEAGLEGDTAVANATLNMYAKCGSLADARAVFERISPARRDCITW 529
Query: 402 SAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQ 461
++M+ Y HG+G +A LF M+ + +KP+ V + ++L A + + G +
Sbjct: 530 NSMLAAYGHHGLGKEAFELFQAMEAEKLVKPNKVTFVAVLDASTSRTSIAQGREIHARVV 589
Query: 462 SNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQV--WAPLLSACMKHHNVE 519
SN G E L+++ + G D A + I + Q V W L++ ++ E
Sbjct: 590 SN-GFESDTVIQNALLNMYAKCGSLDDA-QAIFDKSSSNQEDVIAWTSLIAGYAQYGQAE 647
Score = 155 bits (393), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 114/452 (25%), Positives = 220/452 (48%), Gaps = 28/452 (6%)
Query: 12 EETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVL--KVGFQQDAFVQT 69
E+ + S ++ H T+ +L+AC + ++ G+R+H+H+L ++ +F+ +
Sbjct: 25 EDLTAAVSRIIADQGHCAPSTYGCLLQACGRLRALKQGQRLHAHILSRRIDLHNHSFLAS 84
Query: 70 GLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGL 129
LI M++KC + + + D R SV S ++I A D+A+ + M V
Sbjct: 85 DLIVMHAKCGNLAEAEALAD----RFASVYSCTAMIRAWMEHGRPDKAMELFDRMEV--- 137
Query: 130 ELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEAR 185
+ +++V+ CS G +H + N + L N+++SMY+K G + +A+
Sbjct: 138 RPNCHALIALVNACSCLGNLAAGRRIHSQISDRDFEENSV-LGNALISMYSKCGSLIDAK 196
Query: 186 SIFDEIGETS---IVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSV-TPDLVVFLNLILGC 241
FD + S +V+W +I ++ G+ EA L M R P+ V F++++ C
Sbjct: 197 QAFDRLPRASKRDVVTWNAMISAFLRNGSAREALQLFRDMDRDGAPPPNSVTFVSVLDSC 256
Query: 242 AQVGNLFL--ALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVF----DAVLEK 295
+ G L L ++H ++ +G E + LV Y K G L+ A VF D
Sbjct: 257 VEAGLLSLEDVRAIHGRIVGAGIEREAFVRTALVDSYGKLGSLDDAWEVFLRKGDEEPST 316
Query: 296 SVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACA--ELGSLSKGKE 353
S+ ++MI Q G+P E++ LF + +P+ TL + L+AC+ ++GS +
Sbjct: 317 SLVTCSAMISACWQNGWPQESLRLFFAMNLEGTKPSGVTLVSVLNACSMLQVGS-ATAFV 375
Query: 354 IEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGM 413
+E+ + + + + T+L+ +++ + +A+ F+ + D+ W+AM Y H
Sbjct: 376 LEQAMEVVSATRDNVLGTTLLTTYARSNDLPRARATFDAIQSPDVVSWNAMAAAYLQHHR 435
Query: 414 GDQALNLFYKMQHVEGLKPDAVVYTSILSACS 445
+AL LF +M +EG++P + + L+AC+
Sbjct: 436 SREALVLFERML-LEGVRPSVATFITALTACA 466
Score = 122 bits (305), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 81/261 (31%), Positives = 133/261 (50%), Gaps = 15/261 (5%)
Query: 237 LILGCAQVGNLFLALSMHSLLL--KSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLE 294
L+ C ++ L +H+ +L + +N L + L+ M+ KCG+L A + D
Sbjct: 49 LLQACGRLRALKQGQRLHAHILSRRIDLHNHSFLASDLIVMHAKCGNLAEAEALADRF-- 106
Query: 295 KSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEI 354
SV+ T+MI + + G P +A+ LF R+ VRPN L ++AC+ LG+L+ G+ I
Sbjct: 107 ASVYSCTAMIRAWMEHGRPDKAMELFDRM---EVRPNCHALIALVNACSCLGNLAAGRRI 163
Query: 355 EEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVP---DKDLAVWSAMINGYAIH 411
I E N + +LI M+SKCG + AK+ F+R+P +D+ W+AMI+ + +
Sbjct: 164 HSQISDRDFEENSVLGNALISMYSKCGSLIDAKQAFDRLPRASKRDVVTWNAMISAFLRN 223
Query: 412 GMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNF---GIEP 468
G +AL LF M P++V + S+L +C +G++ L +++ GIE
Sbjct: 224 GSAREALQLFRDMDRDGAPPPNSVTFVSVLDSCVEAGLL--SLEDVRAIHGRIVGAGIER 281
Query: 469 SIEHYLCLVDLLGRAGRFDLA 489
LVD G+ G D A
Sbjct: 282 EAFVRTALVDSYGKLGSLDDA 302
>gi|359478743|ref|XP_002282912.2| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Vitis vinifera]
Length = 642
Score = 343 bits (879), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 206/615 (33%), Positives = 324/615 (52%), Gaps = 45/615 (7%)
Query: 33 FPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDM--YSKCSDFVSSRKVLDE 90
F +L+ C +I+ + K++ S ++ G +D F + LI S+ D +L
Sbjct: 9 FLSLLEKCKSISQL---KQIQSQMVLTGLIEDGFASSRLIAFCAISEWRDLDYCTNIL-- 63
Query: 91 MPVRLRSVVSWNSIISAHSRACLNDEAILVLKE-MWVLGLELSASTFVSVVSGCS----F 145
R + SWN I + EA+++ K + G + T+ + C+
Sbjct: 64 FNTRNPNTFSWNVAIRGFLDSENPREAVVLYKRVLQCDGTKPDNYTYPLLFKACARLSLI 123
Query: 146 RQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGG 205
R G + V LG +++I ++N+V+ + G ++ AR +FD+ +VSW ++I G
Sbjct: 124 RMGSEILGHVLHLGF-DSDIFVSNAVIHLLVSCGDLDGARKMFDKSCVRDLVSWNSMING 182
Query: 206 YVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNE 265
YV G EA +M+ + PD V + ++ CAQ+ +L L H + ++G
Sbjct: 183 YVRRGWAYEALNFYREMKVEGIKPDEVTMIGVVSSCAQLEDLDLGRESHCYIEENGLKLT 242
Query: 266 DPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGY------------- 312
PL N L+ MY KCG+LE AR++FD++ K++ WT+M+ GYAQ G
Sbjct: 243 VPLANALMDMYMKCGNLESARKLFDSMTNKTMVSWTTMVVGYAQSGLLDMAWKLFDEMPD 302
Query: 313 ------------------PSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEI 354
EA+ LF + ++ P+E T+ + LSAC++LG+L G I
Sbjct: 303 KDVVPWNAMIGGYVHANRGKEALALFNEMQAMNINPDEVTMVSCLSACSQLGALDVGIWI 362
Query: 355 EEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMG 414
YI + L N + T+LI M++KCG+I KA +VF+ +P ++ W+A+I+G A+HG
Sbjct: 363 HHYIEKHELSLNVALGTALIDMYAKCGKITKAIQVFQELPGRNSLTWTAIISGLALHGNA 422
Query: 415 DQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYL 474
A+ F +M + PD V + +LSAC H G+V++G +F M S F + P ++HY
Sbjct: 423 HGAIAYFSEMID-NSVMPDEVTFLGLLSACCHGGLVEEGRKYFSQMSSKFNLSPKLKHYS 481
Query: 475 CLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPG 534
C+VDLLGRAG + A + I MP+E A VW L AC H NV +GE AA LL ++P
Sbjct: 482 CMVDLLGRAGLLEEAEELIKSMPIEADAVVWGALFFACRIHGNVLMGERAASKLLQMDPH 541
Query: 535 STGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHL 594
+G Y+L+AN++ A MWKEA AR LM R + K PG S +E++G V F+ D+SH
Sbjct: 542 DSGIYVLLANMYGEAEMWKEAGKARKLMRQRGVEKTPGCSSIEVNGIVYEFIVRDKSHPQ 601
Query: 595 SVDIRKTLKELHIKL 609
S I + L +L +L
Sbjct: 602 SEQIYECLIQLTRQL 616
Score = 212 bits (540), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 139/471 (29%), Positives = 233/471 (49%), Gaps = 45/471 (9%)
Query: 2 IRNSTNNGSFEETLSTYSSMLQT-GVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
IR ++ + E + Y +LQ G +++T+PL+ KACA ++ I G + HVL +G
Sbjct: 78 IRGFLDSENPREAVVLYKRVLQCDGTKPDNYTYPLLFKACARLSLIRMGSEILGHVLHLG 137
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F D FV +I + C D +RK+ D+ V R +VSWNS+I+ + R EA+
Sbjct: 138 FDSDIFVSNAVIHLLVSCGDLDGARKMFDKSCV--RDLVSWNSMINGYVRRGWAYEALNF 195
Query: 121 LKEMWVLGLELSASTFVSVVSGCSFRQGISM----HCCVYKLGLLNNEIPLANSVMSMYA 176
+EM V G++ T + VVS C+ + + + HC + + G L +PLAN++M MY
Sbjct: 196 YREMKVEGIKPDEVTMIGVVSSCAQLEDLDLGRESHCYIEENG-LKLTVPLANALMDMYM 254
Query: 177 KFGKVNEARSIFDEIGETSIVSWTT-------------------------------IIGG 205
K G + AR +FD + ++VSWTT +IGG
Sbjct: 255 KCGNLESARKLFDSMTNKTMVSWTTMVVGYAQSGLLDMAWKLFDEMPDKDVVPWNAMIGG 314
Query: 206 YVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNE 265
YV+ EA L N+M+ M++ PD V ++ + C+Q+G L + + +H + K +
Sbjct: 315 YVHANRGKEALALFNEMQAMNINPDEVTMVSCLSACSQLGALDVGIWIHHYIEKHELSLN 374
Query: 266 DPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLK 325
L L+ MY KCG + A +VF + ++ WT++I G A G A+ F ++
Sbjct: 375 VALGTALIDMYAKCGKITKAIQVFQELPGRNSLTWTAIISGLALHGNAHGAIAYFSEMID 434
Query: 326 TSVRPNEATLATTLSACAELGSLSKGKE-IEEYIVLNGLESNRQVQTSLIHMFSKCGRIN 384
SV P+E T LSAC G + +G++ + L + + ++ + + G +
Sbjct: 435 NSVMPDEVTFLGLLSACCHGGLVEEGRKYFSQMSSKFNLSPKLKHYSCMVDLLGRAGLLE 494
Query: 385 KAKEVFERVP-DKDLAVWSAMINGYAIHG---MGDQALNLFYKMQ-HVEGL 430
+A+E+ + +P + D VW A+ IHG MG++A + +M H G+
Sbjct: 495 EAEELIKSMPIEADAVVWGALFFACRIHGNVLMGERAASKLLQMDPHDSGI 545
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 88/340 (25%), Positives = 146/340 (42%), Gaps = 38/340 (11%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI G E L+ Y M G+ + T V+ +CA + + G+ H ++ + G
Sbjct: 179 MINGYVRRGWAYEALNFYREMKVEGIKPDEVTMIGVVSSCAQLEDLDLGRESHCYIEENG 238
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRL------------------------- 95
+ + L+DMY KC + S+RK+ D M +
Sbjct: 239 LKLTVPLANALMDMYMKCGNLESARKLFDSMTNKTMVSWTTMVVGYAQSGLLDMAWKLFD 298
Query: 96 ----RSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCS----FRQ 147
+ VV WN++I + A EA+ + EM + + T VS +S CS
Sbjct: 299 EMPDKDVVPWNAMIGGYVHANRGKEALALFNEMQAMNINPDEVTMVSCLSACSQLGALDV 358
Query: 148 GISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYV 207
GI +H + K L N + L +++ MYAK GK+ +A +F E+ + ++WT II G
Sbjct: 359 GIWIHHYIEKHELSLN-VALGTALIDMYAKCGKITKAIQVFQELPGRNSLTWTAIISGLA 417
Query: 208 NVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDP 267
GN + A ++M SV PD V FL L+ C G L + + S +N
Sbjct: 418 LHGNAHGAIAYFSEMIDNSVMPDEVTFLGLLSACCH-GGLVEEGRKYFSQMSSKFNLSPK 476
Query: 268 LDNL--LVSMYTKCGDLELARRVFDAV-LEKSVFLWTSMI 304
L + +V + + G LE A + ++ +E +W ++
Sbjct: 477 LKHYSCMVDLLGRAGLLEEAEELIKSMPIEADAVVWGALF 516
>gi|449482345|ref|XP_004156253.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g11460-like [Cucumis sativus]
Length = 614
Score = 343 bits (879), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 184/525 (35%), Positives = 295/525 (56%), Gaps = 8/525 (1%)
Query: 101 WNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCSFRQ----GISMHCCVY 156
WN+ + ++ C +A+ + +M G +A TF + C+ G H +
Sbjct: 8 WNTQLRELAKRCQFLQALSLYPQMLRHGDRPNAFTFPFALKSCAALSLPILGSQFHGQIT 67
Query: 157 KLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETS--IVSWTTIIGGYVNVGNVNE 214
K+G + E + ++SMY K V+ AR +F+E + V + ++ GYV+ ++
Sbjct: 68 KVGCVF-EPFVQTGLISMYCKGSLVDNARKVFEENFHSRKLTVCYNALVSGYVSNSKCSD 126
Query: 215 AFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVS 274
A L QM V + V L LI C NL L S+H LK G++++ + N ++
Sbjct: 127 AVLLFRQMNEEGVPVNSVTLLGLIPACVSPINLELGSSLHCSTLKYGFDSDVSVVNCFIT 186
Query: 275 MYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEAT 334
MY KCG + A+++FD + K + W +M+ GYAQ G + + L++ + V P+ T
Sbjct: 187 MYMKCGSVNYAQKLFDEMPVKGLISWNAMVSGYAQNGLATNVLELYRNMDMNGVHPDPVT 246
Query: 335 LATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVP 394
L LS+CA LG+ S G E+E + +G SN + +LI+M+++CG + KA+ VF+ +P
Sbjct: 247 LVGVLSSCANLGAQSVGHEVEFKMQASGFTSNPFLNNALINMYARCGNLTKAQAVFDGMP 306
Query: 395 DKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGL 454
++ L W+A+I GY +HG G+ A+ LF +M G++PD + +LSACSH+G+ D GL
Sbjct: 307 ERTLVSWTAIIGGYGMHGHGEIAVQLFKEMIR-SGIEPDGTAFVCVLSACSHAGLTDQGL 365
Query: 455 SFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMK 514
+FK M+ N+ +EP EHY C+VDLLGRAGR A I MP++ VW LL AC
Sbjct: 366 EYFKMMKRNYQLEPGPEHYSCMVDLLGRAGRLKEAQTLIESMPIKPDGAVWGALLGACKI 425
Query: 515 HHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWS 574
H NVEL E A + ++ L P + G Y+L++N++++A K R +M +++L K+PG S
Sbjct: 426 HKNVELAELAFERVIELEPENIGYYVLLSNIYSNANNSKGVLRIRIMMKEKKLKKDPGCS 485
Query: 575 QVEIDGSVQVFVAGDRSHHLSVDIRKTLKELHIKLLEAGYIAEAD 619
VE+ G V F+ GDR+H S +I + L+EL +++ E D
Sbjct: 486 YVELKGRVHPFIVGDRNHLQSDEIYRVLEELEAIIMQEFGKPEKD 530
Score = 232 bits (591), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 136/447 (30%), Positives = 234/447 (52%), Gaps = 10/447 (2%)
Query: 2 IRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGF 61
+R F + LS Y ML+ G N+FTFP LK+CA ++ G + H + KVG
Sbjct: 12 LRELAKRCQFLQALSLYPQMLRHGDRPNAFTFPFALKSCAALSLPILGSQFHGQITKVGC 71
Query: 62 QQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVL 121
+ FVQTGLI MY K S ++RKV +E + V +N+++S + +A+L+
Sbjct: 72 VFEPFVQTGLISMYCKGSLVDNARKVFEENFHSRKLTVCYNALVSGYVSNSKCSDAVLLF 131
Query: 122 KEMWVLGLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAK 177
++M G+ +++ T + ++ C + G S+HC K G ++++ + N ++MY K
Sbjct: 132 RQMNEEGVPVNSVTLLGLIPACVSPINLELGSSLHCSTLKYG-FDSDVSVVNCFITMYMK 190
Query: 178 FGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNL 237
G VN A+ +FDE+ ++SW ++ GY G L M V PD V + +
Sbjct: 191 CGSVNYAQKLFDEMPVKGLISWNAMVSGYAQNGLATNVLELYRNMDMNGVHPDPVTLVGV 250
Query: 238 ILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSV 297
+ CA +G + + + SG+ + L+N L++MY +CG+L A+ VFD + E+++
Sbjct: 251 LSSCANLGAQSVGHEVEFKMQASGFTSNPFLNNALINMYARCGNLTKAQAVFDGMPERTL 310
Query: 298 FLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEY 357
WT++IGGY G+ AV LFK ++++ + P+ LSAC+ G +G E +
Sbjct: 311 VSWTAIIGGYGMHGHGEIAVQLFKEMIRSGIEPDGTAFVCVLSACSHAGLTDQGLEYFKM 370
Query: 358 IVLN-GLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDK-DLAVWSAMINGYAIHGMGD 415
+ N LE + + ++ + + GR+ +A+ + E +P K D AVW A++ IH +
Sbjct: 371 MKRNYQLEPGPEHYSCMVDLLGRAGRLKEAQTLIESMPIKPDGAVWGALLGACKIHKNVE 430
Query: 416 QALNLFYKMQHVEGLKPDAVVYTSILS 442
A F + V L+P+ + Y +LS
Sbjct: 431 LAELAF---ERVIELEPENIGYYVLLS 454
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 84/313 (26%), Positives = 159/313 (50%), Gaps = 11/313 (3%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
++ +N + + + M + GV NS T ++ AC + ++ G +H LK G
Sbjct: 114 LVSGYVSNSKCSDAVLLFRQMNEEGVPVNSVTLLGLIPACVSPINLELGSSLHCSTLKYG 173
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F D V I MY KC ++K+ DEMPV + ++SWN+++S +++ L + +
Sbjct: 174 FDSDVSVVNCFITMYMKCGSVNYAQKLFDEMPV--KGLISWNAMVSGYAQNGLATNVLEL 231
Query: 121 LKEMWVLGLELSASTFVSVVSGCSFRQGISM-HCCVYKL---GLLNNEIPLANSVMSMYA 176
+ M + G+ T V V+S C+ S+ H +K+ G +N L N++++MYA
Sbjct: 232 YRNMDMNGVHPDPVTLVGVLSSCANLGAQSVGHEVEFKMQASGFTSNPF-LNNALINMYA 290
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
+ G + +A+++FD + E ++VSWT IIGGY G+ A L +M R + PD F+
Sbjct: 291 RCGNLTKAQAVFDGMPERTLVSWTAIIGGYGMHGHGEIAVQLFKEMIRSGIEPDGTAFVC 350
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNL--LVSMYTKCGDLELARRVFDAV-L 293
++ C+ G L ++K Y E ++ +V + + G L+ A+ + +++ +
Sbjct: 351 VLSACSHAGLTDQGLEYFK-MMKRNYQLEPGPEHYSCMVDLLGRAGRLKEAQTLIESMPI 409
Query: 294 EKSVFLWTSMIGG 306
+ +W +++G
Sbjct: 410 KPDGAVWGALLGA 422
>gi|224115126|ref|XP_002332220.1| predicted protein [Populus trichocarpa]
gi|222831877|gb|EEE70354.1| predicted protein [Populus trichocarpa]
Length = 673
Score = 342 bits (878), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 183/578 (31%), Positives = 323/578 (55%), Gaps = 19/578 (3%)
Query: 52 VHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRA 111
VH+HV+K G ++ FV + L+++Y+KC V++RKV D +P R+VV W ++++ + +
Sbjct: 2 VHAHVIKTGTHEEFFVMSFLVNVYAKCGVMVNARKVFDNLP--RRNVVVWTTLMTGYVQN 59
Query: 112 CLNDEAILVLKEMWVLGLELSASTFVSVVSGCSFRQGISM----HCCVYKLGLLNNEIPL 167
+ A+ V +M G S T ++ CS + I++ H + K + +++ +
Sbjct: 60 SQPEVAVEVFGDMLESGSFPSNFTLSIALNACSSLESITLGKQFHAFIIKYRI-SHDSSI 118
Query: 168 ANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSV 227
N++ S+Y+KFG ++ + F E GE ++SWTTII + G L +M +V
Sbjct: 119 GNALCSLYSKFGSLDSSVKAFRETGEKDVISWTTIISACGDNGRAGMGLRLFIEMLFENV 178
Query: 228 TPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARR 287
P+ +++ C+ + + L + +HSL K G+ + + N LV +Y KCG ++ A+
Sbjct: 179 EPNDFTLTSVLSLCSTIQSSDLGMQVHSLSTKLGHESNLRITNSLVYLYLKCGCIDEAKN 238
Query: 288 VFDAVLEKSVFLWTSMIGGYAQL-----------GYPSEAVNLFKRLLKTSVRPNEATLA 336
+F+ + K++ W +MI G+AQ +EA+ ++ +L ++ +P+ TL+
Sbjct: 239 LFNRMEYKNLITWNAMIAGHAQAMDLAKDNFSAQQTGTEALGMYLKLNRSGRKPDLFTLS 298
Query: 337 TTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDK 396
+ L+ C+ L +L +G++I + +G S+ V T+L+ M+ KCG I +A++ F + +
Sbjct: 299 SILTVCSRLAALEQGEQIHAQTIKSGFLSDVVVGTALVDMYDKCGSIERARKAFLDMSTR 358
Query: 397 DLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSF 456
L W++MI +A HG AL LF M+ + G +P+ + + +L+ACSH+GMVD+ L +
Sbjct: 359 TLISWTSMITSFARHGQSQHALQLFEDMR-LAGFRPNQITFVGVLAACSHAGMVDEALEY 417
Query: 457 FKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHH 516
F+ MQ + I+P ++HY CLVD+ R GR D A I M VE +W L++ C H
Sbjct: 418 FEIMQKEYKIKPVMDHYGCLVDMFVRLGRLDEAFDVIKRMDVEPNEFIWLLLIAGCRNHG 477
Query: 517 NVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQV 576
N ELG YAA+ LL L P ST Y+++ N++ SA W++ + R LM + ++ K WS++
Sbjct: 478 NEELGFYAAEQLLKLKPRSTETYVVLLNMYISAERWEDVSMVRRLMKEEKVGKLKDWSRI 537
Query: 577 EIDGSVQVFVAGDRSHHLSVDIRKTLKELHIKLLEAGY 614
I G V F +R H+ + ++ L +L + GY
Sbjct: 538 SIKGEVHSFKTNNRLHNHNAELHTLLNDLVDRAKSLGY 575
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 122/445 (27%), Positives = 223/445 (50%), Gaps = 27/445 (6%)
Query: 7 NNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAF 66
N E + + ML++G ++FT + L AC+++ SI GK+ H+ ++K D+
Sbjct: 58 QNSQPEVAVEVFGDMLESGSFPSNFTLSIALNACSSLESITLGKQFHAFIIKYRISHDSS 117
Query: 67 VQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWV 126
+ L +YSK SS K E + V+SW +IISA + + EM
Sbjct: 118 IGNALCSLYSKFGSLDSSVKAFRETGE--KDVISWTTIISACGDNGRAGMGLRLFIEMLF 175
Query: 127 LGLELSASTFVSVVSGCSFRQ----GISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVN 182
+E + T SV+S CS Q G+ +H KLG +N + + NS++ +Y K G ++
Sbjct: 176 ENVEPNDFTLTSVLSLCSTIQSSDLGMQVHSLSTKLGHESN-LRITNSLVYLYLKCGCID 234
Query: 183 EARSIFDEIGETSIVSWTTIIGGYVNVGNV-----------NEAFGLCNQMRRMSVTPDL 231
EA+++F+ + ++++W +I G+ ++ EA G+ ++ R PDL
Sbjct: 235 EAKNLFNRMEYKNLITWNAMIAGHAQAMDLAKDNFSAQQTGTEALGMYLKLNRSGRKPDL 294
Query: 232 VVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDA 291
+++ C+++ L +H+ +KSG+ ++ + LV MY KCG +E AR+ F
Sbjct: 295 FTLSSILTVCSRLAALEQGEQIHAQTIKSGFLSDVVVGTALVDMYDKCGSIERARKAFLD 354
Query: 292 VLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKG 351
+ +++ WTSMI +A+ G A+ LF+ + RPN+ T L+AC+ G + +
Sbjct: 355 MSTRTLISWTSMITSFARHGQSQHALQLFEDMRLAGFRPNQITFVGVLAACSHAGMVDEA 414
Query: 352 KEIEEYIVLNGLESNRQVQT---SLIHMFSKCGRINKAKEVFERVP-DKDLAVWSAMING 407
+E + ++ + V L+ MF + GR+++A +V +R+ + + +W +I G
Sbjct: 415 --LEYFEIMQKEYKIKPVMDHYGCLVDMFVRLGRLDEAFDVIKRMDVEPNEFIWLLLIAG 472
Query: 408 YAIHGMGDQALNLFYKMQHVEGLKP 432
H G++ L FY + + LKP
Sbjct: 473 CRNH--GNEELG-FYAAEQLLKLKP 494
Score = 110 bits (275), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 87/348 (25%), Positives = 158/348 (45%), Gaps = 28/348 (8%)
Query: 7 NNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAF 66
+NG L + ML V N FT VL C+ I S G +VHS K+G + +
Sbjct: 159 DNGRAGMGLRLFIEMLFENVEPNDFTLTSVLSLCSTIQSSDLGMQVHSLSTKLGHESNLR 218
Query: 67 VQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRAC-----------LND 115
+ L+ +Y KC ++ + + M +++++WN++I+ H++A
Sbjct: 219 ITNSLVYLYLKCGCIDEAKNLFNRM--EYKNLITWNAMIAGHAQAMDLAKDNFSAQQTGT 276
Query: 116 EAILVLKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSV 171
EA+ + ++ G + T S+++ CS QG +H K G L +++ + ++
Sbjct: 277 EALGMYLKLNRSGRKPDLFTLSSILTVCSRLAALEQGEQIHAQTIKSGFL-SDVVVGTAL 335
Query: 172 MSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDL 231
+ MY K G + AR F ++ +++SWT++I + G A L MR P+
Sbjct: 336 VDMYDKCGSIERARKAFLDMSTRTLISWTSMITSFARHGQSQHALQLFEDMRLAGFRPNQ 395
Query: 232 VVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNL--LVSMYTKCGDLELARRVF 289
+ F+ ++ C+ G + AL ++ K Y + +D+ LV M+ + G L+ A F
Sbjct: 396 ITFVGVLAACSHAGMVDEALEYFEIMQKE-YKIKPVMDHYGCLVDMFVRLGRLDEA---F 451
Query: 290 DAV----LEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEA 333
D + +E + F+W +I G G ++LLK R E
Sbjct: 452 DVIKRMDVEPNEFIWLLLIAGCRNHGNEELGFYAAEQLLKLKPRSTET 499
>gi|222635654|gb|EEE65786.1| hypothetical protein OsJ_21486 [Oryza sativa Japonica Group]
Length = 749
Score = 342 bits (878), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 199/623 (31%), Positives = 335/623 (53%), Gaps = 10/623 (1%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+I NG + L +SSML++G + F ++AC + + G++VH+H LK
Sbjct: 106 VIAAHVQNGRAGDALGLFSSMLRSGTAADQFALGSAVRACTELGDVGTGRQVHAHALKSE 165
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
D VQ L+ MYSK + V +L E ++ + ++SW SII+ ++ EA+ V
Sbjct: 166 RGSDLIVQNALVTMYSK-NGLVDDGFMLFER-IKDKDLISWGSIIAGFAQQGFEMEALQV 223
Query: 121 LKEMWVLGLELSAS-TFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMY 175
+EM V G F S C S+ G +H K L+ ++ + S+ MY
Sbjct: 224 FREMIVEGSHHPNEFHFGSAFRACGAVGSWEYGEQIHGLSIKY-RLDRDLYVGCSLSDMY 282
Query: 176 AKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFL 235
A+ ++ AR F I +VSW +I+ Y G ++EA L ++MR + PD +
Sbjct: 283 ARCKNLDSARVAFYRIEAPDLVSWNSIVNAYSVEGLLSEALVLFSEMRDSGLRPDGITVR 342
Query: 236 NLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEK 295
L+ C L+ +HS L+K G + + + N L+SMY +C DL A VF + ++
Sbjct: 343 GLLCACVGRDALYHGRLIHSYLVKLGLDGDVSVCNSLLSMYARCSDLSSAMDVFHEIKDQ 402
Query: 296 SVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIE 355
V W S++ AQ +P E + LF L K+ + +L LSA AELG K++
Sbjct: 403 DVVTWNSILTACAQHNHPEEVLKLFSLLNKSEPSLDRISLNNVLSASAELGYFEMVKQVH 462
Query: 356 EYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPD-KDLAVWSAMINGYAIHGMG 414
Y GL +R + +LI ++KCG ++ A +FE + + +D+ WS++I GYA G
Sbjct: 463 AYAFKAGLVDDRMLSNTLIDTYAKCGSLDDAMRLFEIMGNNRDVFSWSSLIVGYAQFGYA 522
Query: 415 DQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYL 474
+A +LF +M+ + G++P+ V + +L+ACS G V++G ++ M+ +GI P+ EH
Sbjct: 523 KEAFDLFSRMRSL-GIRPNHVTFIGVLTACSRVGFVNEGCYYYSIMEPEYGIVPTREHCS 581
Query: 475 CLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPG 534
C+VDLL RAG+ A I +MP E +W LL+A H+++E+G+ AA+ +L ++P
Sbjct: 582 CIVDLLARAGKLTEAANFIDQMPFEPDIIMWKTLLAASKMHNDMEMGKRAAEGILNIDPS 641
Query: 535 STGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHL 594
+ Y+L+ N++ ++G W E A + M + K PG S V++ G ++VF+ DRSH
Sbjct: 642 HSAAYVLLCNIYAASGNWNEFARLKKAMRTSGVKKSPGKSWVKLKGELKVFIVEDRSHPE 701
Query: 595 SVDIRKTLKELHIKLLEAGYIAE 617
S +I L+ + +++++AGY+ +
Sbjct: 702 SEEIYAMLELIGMEMIKAGYVPK 724
Score = 155 bits (391), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 102/380 (26%), Positives = 185/380 (48%), Gaps = 11/380 (2%)
Query: 197 VSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSL 256
VSW ++I +V G +A GL + M R D + + C ++G++ +H+
Sbjct: 101 VSWASVIAAHVQNGRAGDALGLFSSMLRSGTAADQFALGSAVRACTELGDVGTGRQVHAH 160
Query: 257 LLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEA 316
LKS ++ + N LV+MY+K G ++ +F+ + +K + W S+I G+AQ G+ EA
Sbjct: 161 ALKSERGSDLIVQNALVTMYSKNGLVDDGFMLFERIKDKDLISWGSIIAGFAQQGFEMEA 220
Query: 317 VNLFKRLL-KTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIH 375
+ +F+ ++ + S PNE + AC +GS G++I + L+ + V SL
Sbjct: 221 LQVFREMIVEGSHHPNEFHFGSAFRACGAVGSWEYGEQIHGLSIKYRLDRDLYVGCSLSD 280
Query: 376 MFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAV 435
M+++C ++ A+ F R+ DL W++++N Y++ G+ +AL LF +M+ GL+PD +
Sbjct: 281 MYARCKNLDSARVAFYRIEAPDLVSWNSIVNAYSVEGLLSEALVLFSEMRD-SGLRPDGI 339
Query: 436 VYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHE 495
+L AC + G S G++ + L+ + R A+ HE
Sbjct: 340 TVRGLLCACVGRDALYHG-RLIHSYLVKLGLDGDVSVCNSLLSMYARCSDLSSAMDVFHE 398
Query: 496 MPVEVQAQVWAPLLSACMKHHNVE----LGEYAAKNLLTLNPGSTGNYILMANLFTSAGM 551
+ + W +L+AC +H++ E L K+ +L+ S N + + M
Sbjct: 399 IK-DQDVVTWNSILTACAQHNHPEEVLKLFSLLNKSEPSLDRISLNNVLSASAELGYFEM 457
Query: 552 WKEA---ATARGLMDDRRLT 568
K+ A GL+DDR L+
Sbjct: 458 VKQVHAYAFKAGLVDDRMLS 477
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 121/505 (23%), Positives = 217/505 (42%), Gaps = 66/505 (13%)
Query: 33 FPLVLKACANINSIWDGKRVHSHVL-------KVGFQQDAFVQTGLIDMYSKCSDFVSSR 85
+ ++ AC+ + S+ G+RVH H++ + + LI MY
Sbjct: 47 YAALVSACSRLRSLPQGRRVHRHLVASSSSSPDAQLAGNTVLGNHLITMYG--------- 97
Query: 86 KVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCS- 144
R+ VSW S+I+AH + +A+ + M G S V C+
Sbjct: 98 ----------RNPVSWASVIAAHVQNGRAGDALGLFSSMLRSGTAADQFALGSAVRACTE 147
Query: 145 ---FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTT 201
G +H K +++ + N++++MY+K G V++ +F+ I + ++SW +
Sbjct: 148 LGDVGTGRQVHAHALK-SERGSDLIVQNALVTMYSKNGLVDDGFMLFERIKDKDLISWGS 206
Query: 202 IIGGYVNVGNVNEAFGLCNQM-RRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKS 260
II G+ G EA + +M S P+ F + C VG+ +H L +K
Sbjct: 207 IIAGFAQQGFEMEALQVFREMIVEGSHHPNEFHFGSAFRACGAVGSWEYGEQIHGLSIKY 266
Query: 261 GYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLF 320
+ + + L MY +C +L+ AR F + + W S++ Y+ G SEA+ LF
Sbjct: 267 RLDRDLYVGCSLSDMYARCKNLDSARVAFYRIEAPDLVSWNSIVNAYSVEGLLSEALVLF 326
Query: 321 KRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKC 380
+ + +RP+ T+ L AC +L G+ I Y+V GL+ + V SL+ M+++C
Sbjct: 327 SEMRDSGLRPDGITVRGLLCACVGRDALYHGRLIHSYLVKLGLDGDVSVCNSLLSMYARC 386
Query: 381 GRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSI 440
++ A +VF + D+D+ W++++ A H ++ L LF + E D + ++
Sbjct: 387 SDLSSAMDVFHEIKDQDVVTWNSILTACAQHNHPEEVLKLFSLLNKSEP-SLDRISLNNV 445
Query: 441 LSACSH----------------SGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAG 484
LSA + +G+VDD M SN L+D + G
Sbjct: 446 LSASAELGYFEMVKQVHAYAFKAGLVDD------RMLSN-----------TLIDTYAKCG 488
Query: 485 RFDLALKTIHEMPVEVQAQVWAPLL 509
D A++ M W+ L+
Sbjct: 489 SLDDAMRLFEIMGNNRDVFSWSSLI 513
>gi|296090287|emb|CBI40106.3| unnamed protein product [Vitis vinifera]
Length = 590
Score = 342 bits (878), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 189/579 (32%), Positives = 327/579 (56%), Gaps = 12/579 (2%)
Query: 32 TFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEM 91
T +L C+ ++ G +H+ VLK G Q D F+ +++MY+KC +R+V DEM
Sbjct: 5 TLSSLLHHCSKTKALRCGLSLHAAVLKTGTQSDVFMSNHVLNMYAKCGHTTFARQVFDEM 64
Query: 92 PVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCSFRQGISM 151
+ ++VSW+++IS + +A AI + +M+++ E F SV+S C+ +++
Sbjct: 65 FEK--NLVSWSAMISGYDQAGEPQMAIDLYSQMFLVPNEY---VFASVISACASLSAVTL 119
Query: 152 ----HCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYV 207
H K G + ++NS++SMY K + ++A S+F E + VS+ +I G+V
Sbjct: 120 GQKIHSRSLKFGYESISF-VSNSLISMYMKCNQCSDALSVFTNTPEPNCVSYNALITGFV 178
Query: 208 NVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDP 267
+ MR+ + PD F+ ++ C NL +H +K ++
Sbjct: 179 ENQQLERGLEFFKLMRQQGLIPDRFAFMGVLGICTTTENLKRGAELHCQTVKLNLDSTPF 238
Query: 268 LDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLK-T 326
+ N++++MY++ ++ A + F + EK V W ++I + ++ + +FK + + T
Sbjct: 239 IGNVIITMYSELNLIQEAEKAFRLIEEKDVISWNTLIAACSHCDDHAKGLRVFKHMTEET 298
Query: 327 SVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKA 386
+VRP++ T + L+ACA L S+S GK+I +++ L + V +L++M++KCG I A
Sbjct: 299 NVRPDDFTFTSALAACAGLASMSHGKQIHAHLMRTRLYQDLGVGNALVNMYAKCGCIGYA 358
Query: 387 KEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSH 446
++F ++ +L W+ +I G+ HG+G++A+ LF +M + G++PD+V + +L+AC+H
Sbjct: 359 YDIFSKMVHHNLVSWNTIIAGFGNHGLGERAVELFEQM-NASGIRPDSVTFIGLLTACNH 417
Query: 447 SGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWA 506
+G+VD G +F SM+ +GI P IEH+ CL+D+LGRAGR + A + + + P V
Sbjct: 418 AGLVDKGQLYFNSMEETYGIAPDIEHFSCLIDMLGRAGRLNEAEEYMRKFPFWNDPVVLV 477
Query: 507 PLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRR 566
LLSA H +V +GE AK LL L P +T Y+L++NL+ S GMW A AR +
Sbjct: 478 SLLSASRLHGDVVIGERLAKWLLKLQPVTTSPYVLLSNLYASDGMWDSVAEARKRLKGSG 537
Query: 567 LTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKEL 605
L KEPG S +E++GSV+ F GD +H +I+ LK L
Sbjct: 538 LKKEPGHSLIEVNGSVEKFTIGDFTHLRIKEIKGILKTL 576
Score = 164 bits (416), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 114/441 (25%), Positives = 210/441 (47%), Gaps = 24/441 (5%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI G + + YS M N + F V+ ACA+++++ G+++HS LK G
Sbjct: 75 MISGYDQAGEPQMAIDLYSQMFLVP---NEYVFASVISACASLSAVTLGQKIHSRSLKFG 131
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
++ +FV LI MY KC+ + V P + VS+N++I+ + +
Sbjct: 132 YESISFVSNSLISMYMKCNQCSDALSVFTNTPE--PNCVSYNALITGFVENQQLERGLEF 189
Query: 121 LKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIP-LANSVMSMY 175
K M GL F+ V+ C+ ++G +HC KL L + P + N +++MY
Sbjct: 190 FKLMRQQGLIPDRFAFMGVLGICTTTENLKRGAELHCQTVKLNL--DSTPFIGNVIITMY 247
Query: 176 AKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQM-RRMSVTPDLVVF 234
++ + EA F I E ++SW T+I + + + + M +V PD F
Sbjct: 248 SELNLIQEAEKAFRLIEEKDVISWNTLIAACSHCDDHAKGLRVFKHMTEETNVRPDDFTF 307
Query: 235 LNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLE 294
+ + CA + ++ +H+ L+++ + + N LV+MY KCG + A +F ++
Sbjct: 308 TSALAACAGLASMSHGKQIHAHLMRTRLYQDLGVGNALVNMYAKCGCIGYAYDIFSKMVH 367
Query: 295 KSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGK-- 352
++ W ++I G+ G AV LF+++ + +RP+ T L+AC G + KG+
Sbjct: 368 HNLVSWNTIIAGFGNHGLGERAVELFEQMNASGIRPDSVTFIGLLTACNHAGLVDKGQLY 427
Query: 353 --EIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPD-KDLAVWSAMINGYA 409
+EE G+ + + + LI M + GR+N+A+E + P D V ++++
Sbjct: 428 FNSMEETY---GIAPDIEHFSCLIDMLGRAGRLNEAEEYMRKFPFWNDPVVLVSLLSASR 484
Query: 410 IHG---MGDQALNLFYKMQHV 427
+HG +G++ K+Q V
Sbjct: 485 LHGDVVIGERLAKWLLKLQPV 505
>gi|357130409|ref|XP_003566841.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Brachypodium distachyon]
Length = 815
Score = 342 bits (878), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 181/594 (30%), Positives = 326/594 (54%), Gaps = 11/594 (1%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
++ +G + + ++ +G + +T P VLK C + G+ VH+ V+K G
Sbjct: 223 LLNGYARHGDYRRVMIIIEKLVASGDEISKYTLPTVLKCCMELGLAKYGQSVHASVIKRG 282
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+ D + + L++MYS+C + +V + + VV +++IS R + EA+ +
Sbjct: 283 LETDNVLNSCLVEMYSRCLSAEEAYEVF--IRIDEPDVVHCSAMISCFDRHDMAWEALDL 340
Query: 121 LKEMWVLGLELSASTFVSVVSGCSFRQG-----ISMHCCVYKLGLLNNEIPLANSVMSMY 175
+M +G++ + FV + +G + R G S+H + K G + + +++++MY
Sbjct: 341 FVKMSGMGVKPNHYIFVGI-AGVASRTGDANLCRSVHAYIVKSGFAMLK-GVGDAILNMY 398
Query: 176 AKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFL 235
K G V +A FD I E SW TI+ + + N + + QM + + ++
Sbjct: 399 VKVGAVQDATVTFDLIHEPDTFSWNTILSAFYSGSNCEQGLRIFKQMACEGFSANKYTYV 458
Query: 236 NLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEK 295
+++ C + NL +H+ +LKSG N+ + +LV MY + G A VF+ + E+
Sbjct: 459 SVLRCCTSLMNLRFGTQVHACILKSGLQNDTDVSRMLVDMYAQSGCFTSACLVFEQLKER 518
Query: 296 SVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIE 355
F WT ++ GYA+ + V F+ +L+ ++RP++ATLA +LS C+++ SL G ++
Sbjct: 519 DAFSWTVIMSGYAKTEEAEKVVEYFRSMLRENIRPSDATLAVSLSVCSDMASLGSGLQLH 578
Query: 356 EYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGD 415
+ + +G S+ V +L+ M+ KCG I A+ +F +D W+ +I GY+ HG G
Sbjct: 579 SWAIKSGWNSS-VVSGALVDMYVKCGNIADAEMLFHESETRDQVAWNTIICGYSQHGHGY 637
Query: 416 QALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLC 475
+AL+ F +M EG +PD + + +LSACSH+G++++G +FKS+ S +GI P++EHY C
Sbjct: 638 KALDAFKQMVD-EGKRPDGITFVGVLSACSHAGLLNEGRKYFKSLSSIYGITPTMEHYAC 696
Query: 476 LVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGS 535
+VD+L +AGR A I++MP+ + +W +L AC H N+E+ E AA+ L L P
Sbjct: 697 MVDILSKAGRLVEAESLINQMPLAPDSSIWRTILGACRIHRNIEIAERAAERLFELEPHD 756
Query: 536 TGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGD 589
+ IL++N++ G W + R ++ D + KEPG S +EI+G + +F++ D
Sbjct: 757 ASSSILLSNIYADLGRWSDVTRVRNILLDHGVKKEPGCSWIEINGQIHMFLSQD 810
Score = 181 bits (460), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 133/520 (25%), Positives = 247/520 (47%), Gaps = 13/520 (2%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI T G ++ L ++ M Q G+ N FT VLKAC+ + +VH V+K+
Sbjct: 122 MISAHTAAGDSDQALDMFARMNQEGIAPNGFTLASVLKACSGGSHSKFTHQVHGQVVKLN 181
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
D +V + L++ Y+ C + ++ VL +P RS VSWN++++ ++R +++
Sbjct: 182 GLDDPYVGSSLVEAYTSCGELDAAETVLLGLPE--RSDVSWNALLNGYARHGDYRRVMII 239
Query: 121 LKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
++++ G E+S T +V+ C + G S+H V K GL + + L + ++ MY+
Sbjct: 240 IEKLVASGDEISKYTLPTVLKCCMELGLAKYGQSVHASVIKRGLETDNV-LNSCLVEMYS 298
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
+ EA +F I E +V + +I + EA L +M M V P+ +F+
Sbjct: 299 RCLSAEEAYEVFIRIDEPDVVHCSAMISCFDRHDMAWEALDLFVKMSGMGVKPNHYIFVG 358
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
+ ++ G+ L S+H+ ++KSG+ + + +++MY K G ++ A FD + E
Sbjct: 359 IAGVASRTGDANLCRSVHAYIVKSGFAMLKGVGDAILNMYVKVGAVQDATVTFDLIHEPD 418
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEE 356
F W +++ + + + +FK++ N+ T + L C L +L G ++
Sbjct: 419 TFSWNTILSAFYSGSNCEQGLRIFKQMACEGFSANKYTYVSVLRCCTSLMNLRFGTQVHA 478
Query: 357 YIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQ 416
I+ +GL+++ V L+ M+++ G A VFE++ ++D W+ +++GYA ++
Sbjct: 479 CILKSGLQNDTDVSRMLVDMYAQSGCFTSACLVFEQLKERDAFSWTVIMSGYAKTEEAEK 538
Query: 417 ALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCL 476
+ F M E ++P LS CS + GL S G S+ L
Sbjct: 539 VVEYFRSMLR-ENIRPSDATLAVSLSVCSDMASLGSGLQ-LHSWAIKSGWNSSVVSG-AL 595
Query: 477 VDLLGRAGRFDLALKTIHEMPVEVQAQV-WAPLLSACMKH 515
VD+ + G A HE E + QV W ++ +H
Sbjct: 596 VDMYVKCGNIADAEMLFHE--SETRDQVAWNTIICGYSQH 633
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 118/489 (24%), Positives = 225/489 (46%), Gaps = 14/489 (2%)
Query: 37 LKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLR 96
L+ CA ++ G+ +H+ +L+ D F+ L++MY KC V +R+V D MP R
Sbjct: 57 LQDCAVRRTLRRGQELHARLLRSALHPDTFLLDSLLNMYCKCGRLVDARRVFDGMP--HR 114
Query: 97 SVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCS------FRQGIS 150
+V+W ++ISAH+ A +D+A+ + M G+ + T SV+ CS F +
Sbjct: 115 DIVAWTAMISAHTAAGDSDQALDMFARMNQEGIAPNGFTLASVLKACSGGSHSKFTHQV- 173
Query: 151 MHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVG 210
H V KL L++ + +S++ Y G+++ A ++ + E S VSW ++ GY G
Sbjct: 174 -HGQVVKLNGLDDPY-VGSSLVEAYTSCGELDAAETVLLGLPERSDVSWNALLNGYARHG 231
Query: 211 NVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDN 270
+ + ++ ++ C ++G S+H+ ++K G ++ L++
Sbjct: 232 DYRRVMIIIEKLVASGDEISKYTLPTVLKCCMELGLAKYGQSVHASVIKRGLETDNVLNS 291
Query: 271 LLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRP 330
LV MY++C E A VF + E V ++MI + + EA++LF ++ V+P
Sbjct: 292 CLVEMYSRCLSAEEAYEVFIRIDEPDVVHCSAMISCFDRHDMAWEALDLFVKMSGMGVKP 351
Query: 331 NEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVF 390
N + G + + + YIV +G + V ++++M+ K G + A F
Sbjct: 352 NHYIFVGIAGVASRTGDANLCRSVHAYIVKSGFAMLKGVGDAILNMYVKVGAVQDATVTF 411
Query: 391 ERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMV 450
+ + + D W+ +++ + +Q L +F +M EG + Y S+L C+ +
Sbjct: 412 DLIHEPDTFSWNTILSAFYSGSNCEQGLRIFKQMA-CEGFSANKYTYVSVLRCCTSLMNL 470
Query: 451 DDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLS 510
G + + G++ + LVD+ ++G F A ++ E A W ++S
Sbjct: 471 RFGTQVHACILKS-GLQNDTDVSRMLVDMYAQSGCFTSACLVFEQLK-ERDAFSWTVIMS 528
Query: 511 ACMKHHNVE 519
K E
Sbjct: 529 GYAKTEEAE 537
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 86/320 (26%), Positives = 167/320 (52%), Gaps = 2/320 (0%)
Query: 129 LELSASTFVSVVSGCSFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIF 188
L L A+ + R+G +H + + L+ + L +S+++MY K G++ +AR +F
Sbjct: 50 LRLHAAALQDCAVRRTLRRGQELHARLLR-SALHPDTFLLDSLLNMYCKCGRLVDARRVF 108
Query: 189 DEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLF 248
D + IV+WT +I + G+ ++A + +M + + P+ +++ C+ +
Sbjct: 109 DGMPHRDIVAWTAMISAHTAAGDSDQALDMFARMNQEGIAPNGFTLASVLKACSGGSHSK 168
Query: 249 LALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYA 308
+H ++K ++ + + LV YT CG+L+ A V + E+S W +++ GYA
Sbjct: 169 FTHQVHGQVVKLNGLDDPYVGSSLVEAYTSCGELDAAETVLLGLPERSDVSWNALLNGYA 228
Query: 309 QLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQ 368
+ G + + ++L+ + ++ TL T L C ELG G+ + ++ GLE++
Sbjct: 229 RHGDYRRVMIIIEKLVASGDEISKYTLPTVLKCCMELGLAKYGQSVHASVIKRGLETDNV 288
Query: 369 VQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVE 428
+ + L+ M+S+C +A EVF R+ + D+ SAMI+ + H M +AL+LF KM +
Sbjct: 289 LNSCLVEMYSRCLSAEEAYEVFIRIDEPDVVHCSAMISCFDRHDMAWEALDLFVKMSGM- 347
Query: 429 GLKPDAVVYTSILSACSHSG 448
G+KP+ ++ I S +G
Sbjct: 348 GVKPNHYIFVGIAGVASRTG 367
>gi|147798405|emb|CAN70142.1| hypothetical protein VITISV_032085 [Vitis vinifera]
Length = 748
Score = 342 bits (878), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 196/571 (34%), Positives = 312/571 (54%), Gaps = 43/571 (7%)
Query: 36 VLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVS-SRKVLDEMPVR 94
+L C + ++ K++HS ++K G F + LI+ + S F + S +L +
Sbjct: 38 LLSTCKSFQNL---KQIHSQIIKTGLHNTQFALSKLIE-FCAISPFGNLSYALLLFESIE 93
Query: 95 LRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCS----FRQGIS 150
+ WN++I +S + AI M + G+E ++ TF ++ C+ ++G
Sbjct: 94 QPNQFIWNTMIRGNSLSSSPVGAIDFYVRMLLCGVEPNSYTFPFLLKSCAKVGATQEGKQ 153
Query: 151 MHCCVYKLGLLNNEIPLANSVMSMYAKFGKV----------------------------- 181
+H V KLGL ++ + S+++MYA+ G++
Sbjct: 154 IHGHVLKLGLESDPF-VHTSLINMYAQNGELGYAELVFSKSSLRDAVSFTALITGYTLRG 212
Query: 182 --NEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLIL 239
++AR +F+EI VSW +I GY G EA +M+R +V P+ + ++
Sbjct: 213 CLDDARRLFEEIPVRDAVSWNAMIAGYAQSGRFEEALAFFQEMKRANVAPNESTMVTVLS 272
Query: 240 GCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFL 299
CAQ G+L L + S + G + L N L+ MY+KCGDL+ AR +F+ + EK +
Sbjct: 273 ACAQSGSLELGNWVRSWIEDHGLGSNLRLVNALIDMYSKCGDLDKARDLFEGICEKDIIS 332
Query: 300 WTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIV 359
W MIGGY+ + EA+ LF+++ +++V PN+ T + L ACA LG+L GK I YI
Sbjct: 333 WNVMIGGYSHMNSYKEALALFRKMQQSNVEPNDVTFVSILPACAYLGALDLGKWIHAYID 392
Query: 360 LNGLE-SNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQAL 418
L +N + TSLI M++KCG I AK+VF + K L W+AMI+G A+HG + AL
Sbjct: 393 KKFLGLTNTSLWTSLIDMYAKCGNIEAAKQVFAGMKPKSLGSWNAMISGLAMHGHANMAL 452
Query: 419 NLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVD 478
LF +M+ EG +PD + + +LSACSH+G+V+ G F SM ++ I P ++HY C++D
Sbjct: 453 ELFRQMRD-EGFEPDDITFVGVLSACSHAGLVELGRQCFSSMVEDYDISPKLQHYGCMID 511
Query: 479 LLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGN 538
LLGRAG FD A + M ++ +W LL AC H NVELGE+AAK+L L P + G
Sbjct: 512 LLGRAGLFDEAEALMKNMEMKPDGAIWGSLLGACRVHGNVELGEFAAKHLFELEPENPGA 571
Query: 539 YILMANLFTSAGMWKEAATARGLMDDRRLTK 569
Y+L++N++ +AG W + A R ++D+ + K
Sbjct: 572 YVLLSNIYATAGRWDDVARIRTKLNDKGMKK 602
Score = 227 bits (579), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 161/525 (30%), Positives = 266/525 (50%), Gaps = 79/525 (15%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MIR ++ + S + Y ML GV NS+TFP +LK+CA + + +GK++H HVLK+G
Sbjct: 103 MIRGNSLSSSPVGAIDFYVRMLLCGVEPNSYTFPFLLKSCAKVGATQEGKQIHGHVLKLG 162
Query: 61 FQQDAFVQTGLIDMY---------------SKCSDFVS----------------SRKVLD 89
+ D FV T LI+MY S D VS +R++ +
Sbjct: 163 LESDPFVHTSLINMYAQNGELGYAELVFSKSSLRDAVSFTALITGYTLRGCLDDARRLFE 222
Query: 90 EMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGC----SF 145
E+PV R VSWN++I+ ++++ +EA+ +EM + + ST V+V+S C S
Sbjct: 223 EIPV--RDAVSWNAMIAGYAQSGRFEEALAFFQEMKRANVAPNESTMVTVLSACAQSGSL 280
Query: 146 RQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGG 205
G + + GL +N + L N+++ MY+K G +++AR +F+ I E I+SW +IGG
Sbjct: 281 ELGNWVRSWIEDHGLGSN-LRLVNALIDMYSKCGDLDKARDLFEGICEKDIISWNVMIGG 339
Query: 206 YVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKS--GYN 263
Y ++ + EA L +M++ +V P+ V F++++ CA +G L L +H+ + K G
Sbjct: 340 YSHMNSYKEALALFRKMQQSNVEPNDVTFVSILPACAYLGALDLGKWIHAYIDKKFLGLT 399
Query: 264 NEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRL 323
N L L+ MY KCG++E A++VF + KS+ W +MI G A G+ + A+ LF+++
Sbjct: 400 NTS-LWTSLIDMYAKCGNIEAAKQVFAGMKPKSLGSWNAMISGLAMHGHANMALELFRQM 458
Query: 324 LKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRI 383
P++ T LSAC+ G + G RQ +S++
Sbjct: 459 RDEGFEPDDITFVGVLSACSHAGLVELG---------------RQCFSSMV--------- 494
Query: 384 NKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSA 443
E ++ P L + MI+ G+ D+A L M+ +KPD ++ S+L A
Sbjct: 495 ----EDYDISP--KLQHYGCMIDLLGRAGLFDEAEALMKNME----MKPDGAIWGSLLGA 544
Query: 444 CSHSGMVDDGLSFFKSMQSNFGIEP-SIEHYLCLVDLLGRAGRFD 487
C G V+ G K + F +EP + Y+ L ++ AGR+D
Sbjct: 545 CRVHGNVELGEFAAKHL---FELEPENPGAYVLLSNIYATAGRWD 586
>gi|15232006|ref|NP_187516.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207468|sp|Q9SS83.1|PP220_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g09040,
mitochondrial; Flags: Precursor
gi|5923669|gb|AAD56320.1|AC009326_7 hypothetical protein [Arabidopsis thaliana]
gi|332641192|gb|AEE74713.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 1028
Score = 342 bits (878), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 195/628 (31%), Positives = 335/628 (53%), Gaps = 13/628 (2%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MIR +NG + + + M +G + + FTF +L CA + + G + HS ++K
Sbjct: 399 MIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKK 458
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
++ FV L+DMY+KC +R++ + M R V+WN+II ++ + EA +
Sbjct: 459 LAKNLFVGNALVDMYAKCGALEDARQIFERMCDR--DNVTWNTIIGSYVQDENESEAFDL 516
Query: 121 LKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
K M + G+ + S + C+ QG +HC K GL + ++ +S++ MY+
Sbjct: 517 FKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGL-DRDLHTGSSLIDMYS 575
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K G + +AR +F + E S+VS +I GY + N+ EA L +M V P + F
Sbjct: 576 KCGIIKDARKVFSSLPEWSVVSMNALIAGY-SQNNLEEAVVLFQEMLTRGVNPSEITFAT 634
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNE-DPLDNLLVSMYTKCGDLELARRVFDAVLE- 294
++ C + +L L H + K G+++E + L L+ MY + A +F +
Sbjct: 635 IVEACHKPESLTLGTQFHGQITKRGFSSEGEYLGISLLGMYMNSRGMTEACALFSELSSP 694
Query: 295 KSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEI 354
KS+ LWT M+ G++Q G+ EA+ +K + V P++AT T L C+ L SL +G+ I
Sbjct: 695 KSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREGRAI 754
Query: 355 EEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDK-DLAVWSAMINGYAIHGM 413
I + + +LI M++KCG + + +VF+ + + ++ W+++INGYA +G
Sbjct: 755 HSLIFHLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLINGYAKNGY 814
Query: 414 GDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHY 473
+ AL +F M+ + PD + + +L+ACSH+G V DG F+ M +GIE ++H
Sbjct: 815 AEDALKIFDSMRQSH-IMPDEITFLGVLTACSHAGKVSDGRKIFEMMIGQYGIEARVDHV 873
Query: 474 LCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNP 533
C+VDLLGR G A I ++ A++W+ LL AC H + GE +A+ L+ L P
Sbjct: 874 ACMVDLLGRWGYLQEADDFIEAQNLKPDARLWSSLLGACRIHGDDIRGEISAEKLIELEP 933
Query: 534 GSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHH 593
++ Y+L++N++ S G W++A R +M DR + K PG+S ++++ +F AGD+SH
Sbjct: 934 QNSSAYVLLSNIYASQGCWEKANALRKVMRDRGVKKVPGYSWIDVEQRTHIFAAGDKSHS 993
Query: 594 LSVDIRKTLKELHIKLLEAGYIAEADIV 621
I L++L+ L++ + DIV
Sbjct: 994 EIGKIEMFLEDLY-DLMKDDAVVNPDIV 1020
Score = 201 bits (511), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 129/487 (26%), Positives = 228/487 (46%), Gaps = 40/487 (8%)
Query: 13 ETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLI 72
+ L ++ S+ + + N FTF +VL CA ++ G+++H ++K+G +++++ L+
Sbjct: 143 KVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERNSYCGGALV 202
Query: 73 DMYSKCSDFVSSRKVLDEM--PVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLE 130
DMY+KC +R+V + + P + V W + S + +A L +EA+LV + M G
Sbjct: 203 DMYAKCDRISDARRVFEWIVDP----NTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHR 258
Query: 131 LSASTFVSVVSGCSFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDE 190
FV+V+ + Y + GK+ +AR +F E
Sbjct: 259 PDHLAFVTVI--------------------------------NTYIRLGKLKDARLLFGE 286
Query: 191 IGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLA 250
+ +V+W +I G+ G A MR+ SV +++ V NL L
Sbjct: 287 MSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLG 346
Query: 251 LSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQL 310
L +H+ +K G + + + LVSMY+KC +E A +VF+A+ EK+ W +MI GYA
Sbjct: 347 LVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHN 406
Query: 311 GYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQ 370
G + + LF + + ++ T + LS CA L G + I+ L N V
Sbjct: 407 GESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVG 466
Query: 371 TSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGL 430
+L+ M++KCG + A+++FER+ D+D W+ +I Y +A +LF +M ++ G+
Sbjct: 467 NALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRM-NLCGI 525
Query: 431 KPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLAL 490
D S L AC+H + G + G++ + L+D+ + G A
Sbjct: 526 VSDGACLASTLKACTHVHGLYQGKQ-VHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDAR 584
Query: 491 KTIHEMP 497
K +P
Sbjct: 585 KVFSSLP 591
Score = 182 bits (462), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 132/462 (28%), Positives = 224/462 (48%), Gaps = 40/462 (8%)
Query: 18 YSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVH---------------SHVLKVGFQ 62
+ SM++ G+ NS+ ++ A + I D +RV S +K G
Sbjct: 183 HCSMIKMGLERNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLP 242
Query: 63 QDAFVQ----------------TGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIIS 106
++A + +I+ Y + +R + EM VV+WN +IS
Sbjct: 243 EEAVLVFERMRDEGHRPDHLAFVTVINTYIRLGKLKDARLLFGEMSSP--DVVAWNVMIS 300
Query: 107 AHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSG----CSFRQGISMHCCVYKLGLLN 162
H + AI M ++ + ST SV+S + G+ +H KLGL +
Sbjct: 301 GHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLAS 360
Query: 163 NEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQM 222
N I + +S++SMY+K K+ A +F+ + E + V W +I GY + G ++ L M
Sbjct: 361 N-IYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDM 419
Query: 223 RRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDL 282
+ D F +L+ CA +L + HS+++K + N LV MY KCG L
Sbjct: 420 KSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGAL 479
Query: 283 ELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSAC 342
E AR++F+ + ++ W ++IG Y Q SEA +LFKR+ + + A LA+TL AC
Sbjct: 480 EDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKAC 539
Query: 343 AELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWS 402
+ L +GK++ V GL+ + +SLI M+SKCG I A++VF +P+ + +
Sbjct: 540 THVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMN 599
Query: 403 AMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSAC 444
A+I GY+ + + ++A+ LF +M G+ P + + +I+ AC
Sbjct: 600 ALIAGYSQNNL-EEAVVLFQEML-TRGVNPSEITFATIVEAC 639
Score = 168 bits (426), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 126/478 (26%), Positives = 219/478 (45%), Gaps = 56/478 (11%)
Query: 49 GKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAH 108
GK VHS L +G + + ++D+Y+KC+ + K D + + V +WNS++S +
Sbjct: 79 GKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFLE---KDVTAWNSMLSMY 135
Query: 109 SRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCSFRQ----GISMHCCVYKLGLLNNE 164
S + + ++ + + TF V+S C+ G +HC + K+GL N
Sbjct: 136 SSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERNS 195
Query: 165 IPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRR 224
+++ MYAK ++++AR +F+ I + + V WT + GYV G EA + +MR
Sbjct: 196 Y-CGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRD 254
Query: 225 MSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLEL 284
PD + F+ +I + Y + G L+
Sbjct: 255 EGHRPDHLAFVTVI-----------------------------------NTYIRLGKLKD 279
Query: 285 ARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAE 344
AR +F + V W MI G+ + G + A+ F + K+SV+ +TL + LSA
Sbjct: 280 ARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGI 339
Query: 345 LGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAM 404
+ +L G + + GL SN V +SL+ M+SKC ++ A +VFE + +K+ W+AM
Sbjct: 340 VANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAM 399
Query: 405 INGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFF-----KS 459
I GYA +G + + LF M+ G D +TS+LS C+ S ++ G F K
Sbjct: 400 IRGYAHNGESHKVMELFMDMKS-SGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKK 458
Query: 460 MQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHN 517
+ N + + LVD+ + G + A + I E + W ++ + ++ N
Sbjct: 459 LAKNLFVGNA------LVDMYAKCGALEDA-RQIFERMCDRDNVTWNTIIGSYVQDEN 509
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 79/278 (28%), Positives = 141/278 (50%), Gaps = 10/278 (3%)
Query: 247 LFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGG 306
L + ++HS L G ++E L N +V +Y KC + A + FD LEK V W SM+
Sbjct: 76 LRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFD-FLEKDVTAWNSMLSM 134
Query: 307 YAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESN 366
Y+ +G P + + F L + + PN+ T + LS CA ++ G++I ++ GLE N
Sbjct: 135 YSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERN 194
Query: 367 RQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQH 426
+L+ M++KC RI+ A+ VFE + D + W+ + +GY G+ ++A+ +F +M+
Sbjct: 195 SYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRD 254
Query: 427 VEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRF 486
EG +PD + + ++++ G + D F M S P + + ++ G+ G
Sbjct: 255 -EGHRPDHLAFVTVINTYIRLGKLKDARLLFGEMSS-----PDVVAWNVMISGHGKRGCE 308
Query: 487 DLALKTIHEM---PVEVQAQVWAPLLSACMKHHNVELG 521
+A++ M V+ +LSA N++LG
Sbjct: 309 TVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLG 346
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 97/426 (22%), Positives = 167/426 (39%), Gaps = 93/426 (21%)
Query: 29 NSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVL 88
+SF+F L ++ G+R++ HVL D Q L +C F SRKV
Sbjct: 15 DSFSFVRRLSYSPDL-----GRRIYGHVLP---SHDQIHQRLLEICLGQCKLF-KSRKVF 65
Query: 89 DEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCSFRQG 148
DEMP RL + R G
Sbjct: 66 DEMPQRL----------------------------------------------ALALRIG 79
Query: 149 ISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVN 208
++H LG+ ++E L N+++ +YAK +V+ A FD + E + +W +++ Y +
Sbjct: 80 KAVHSKSLILGI-DSEGRLGNAIVDLYAKCAQVSYAEKQFDFL-EKDVTAWNSMLSMYSS 137
Query: 209 VGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPL 268
+G + + + P+ F ++ CA+ N+ +H ++K G
Sbjct: 138 IGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERNSYC 197
Query: 269 DNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSV 328
LV MY KC + ARRVF+ +++ + WT + GY + G P EAV +F+R+
Sbjct: 198 GGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGH 257
Query: 329 RPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKE 388
RP+ T +I+ + + G++ A+
Sbjct: 258 RPDHLAFVT-----------------------------------VINTYIRLGKLKDARL 282
Query: 389 VFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSG 448
+F + D+ W+ MI+G+ G A+ F+ M+ +K S+LSA
Sbjct: 283 LFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRK-SSVKSTRSTLGSVLSAIGIVA 341
Query: 449 MVDDGL 454
+D GL
Sbjct: 342 NLDLGL 347
>gi|357132450|ref|XP_003567843.1| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
chloroplastic-like [Brachypodium distachyon]
Length = 868
Score = 342 bits (877), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 204/618 (33%), Positives = 314/618 (50%), Gaps = 9/618 (1%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
M+ G EE L Y ML G + +TFP VL++C + + G+ VH+HVL+ G
Sbjct: 166 MVGGYGKAGFLEEALDLYHRMLWAGARPDVYTFPCVLRSCGGVPDLTMGREVHAHVLRFG 225
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+ V L+ MY+KC D ++RKV D M L +SWN++I+ H + + +
Sbjct: 226 LGVEVDVLNALVTMYAKCGDVEAARKVFDGM--SLTDCISWNAMIAGHFENHECEAGLEL 283
Query: 121 LKEMWVLGLELSASTFVSVVSGCSFRQGIS----MHCCVYKLGLLNNEIPLANSVMSMYA 176
M +E + T SV + +H K G + + NS++ MY+
Sbjct: 284 FLHMLEDEVEPNLMTITSVTVASGLLSDLDFAKEIHALAVKRGFATD-VAFCNSLIQMYS 342
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
G++ EA ++F + +SWT +I GY G ++A + M +V+PD V +
Sbjct: 343 SLGRMGEACTVFSRMETRDAMSWTAMISGYEKNGFPDKALEVYALMEVNNVSPDDVTVAS 402
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
+ CA +G L + + +H L G+ + N LV MY K +E A VF + +K
Sbjct: 403 ALAACASLGRLDVGIKLHELATSKGFIRYIVVANALVEMYAKSKIIEKAIEVFKYMPDKD 462
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEE 356
V W+SMI G+ EA+ F+ +L V+PN T L+ACA GSL GKEI
Sbjct: 463 VISWSSMIAGFCFNHKNFEALYYFRHML-ADVKPNSVTFIAALAACAATGSLRCGKEIHA 521
Query: 357 YIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQ 416
+++ G+ S V +L+ ++ KCG+ A F KD+ W+ M+ G+ HG GD
Sbjct: 522 HVLRQGIASEGYVPNALLDLYVKCGQTGYAWAQFGAHGTKDVVSWNIMLAGFVAHGHGDI 581
Query: 417 ALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCL 476
AL+ F +M G PD V + ++L CS +GMV G F SM + I P+++HY C+
Sbjct: 582 ALSFFNEMLET-GEHPDEVTFVALLCGCSRAGMVSQGWELFHSMTEKYSIVPNLKHYACM 640
Query: 477 VDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGST 536
VDLL R GR I+ MP+ A VW LL+ C H N+ELGE AAK +L L P
Sbjct: 641 VDLLSRVGRLTEGYNFINRMPITPDAAVWGALLNGCRIHRNIELGELAAKIVLELEPNDA 700
Query: 537 GNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSV 596
G ++L+++L+ AGMW E + R M + L + G S VE+ G++ F+ D SH
Sbjct: 701 GYHVLLSDLYADAGMWAEVSKVRKTMRVKGLEHDYGCSWVEVKGAIHAFLTDDESHPQIK 760
Query: 597 DIRKTLKELHIKLLEAGY 614
+I L ++ ++ +G+
Sbjct: 761 EINDVLDGIYERMKASGF 778
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 113/370 (30%), Positives = 184/370 (49%), Gaps = 4/370 (1%)
Query: 167 LANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMS 226
L N+++SM +FG+ A +F ++ E + SW ++GGY G + EA L ++M
Sbjct: 131 LGNAMLSMLVRFGETWHAWKVFAKMPERDVFSWNVMVGGYGKAGFLEEALDLYHRMLWAG 190
Query: 227 VTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELAR 286
PD+ F ++ C V +L + +H+ +L+ G E + N LV+MY KCGD+E AR
Sbjct: 191 ARPDVYTFPCVLRSCGGVPDLTMGREVHAHVLRFGLGVEVDVLNALVTMYAKCGDVEAAR 250
Query: 287 RVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELG 346
+VFD + W +MI G+ + + LF +L+ V PN T+ + A L
Sbjct: 251 KVFDGMSLTDCISWNAMIAGHFENHECEAGLELFLHMLEDEVEPNLMTITSVTVASGLLS 310
Query: 347 SLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMIN 406
L KEI V G ++ SLI M+S GR+ +A VF R+ +D W+AMI+
Sbjct: 311 DLDFAKEIHALAVKRGFATDVAFCNSLIQMYSSLGRMGEACTVFSRMETRDAMSWTAMIS 370
Query: 407 GYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGI 466
GY +G D+AL + Y + V + PD V S L+AC+ G +D G+ + + ++ G
Sbjct: 371 GYEKNGFPDKALEV-YALMEVNNVSPDDVTVASALAACASLGRLDVGIKLHE-LATSKGF 428
Query: 467 EPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSA-CMKHHNVELGEYAA 525
I LV++ ++ + A++ MP + W+ +++ C H N E Y
Sbjct: 429 IRYIVVANALVEMYAKSKIIEKAIEVFKYMP-DKDVISWSSMIAGFCFNHKNFEALYYFR 487
Query: 526 KNLLTLNPGS 535
L + P S
Sbjct: 488 HMLADVKPNS 497
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 115/399 (28%), Positives = 193/399 (48%), Gaps = 16/399 (4%)
Query: 50 KRVHSHVLKVGFQQDAFVQT-------GLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWN 102
+R H L+ DA T ++ M + + + KV +MP R V SWN
Sbjct: 107 RRAAEHGLRACGHADAAHGTFGLRLGNAMLSMLVRFGETWHAWKVFAKMPER--DVFSWN 164
Query: 103 SIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGC----SFRQGISMHCCVYKL 158
++ + +A +EA+ + M G TF V+ C G +H V +
Sbjct: 165 VMVGGYGKAGFLEEALDLYHRMLWAGARPDVYTFPCVLRSCGGVPDLTMGREVHAHVLRF 224
Query: 159 GLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGL 218
GL E+ + N++++MYAK G V AR +FD + T +SW +I G+ L
Sbjct: 225 GL-GVEVDVLNALVTMYAKCGDVEAARKVFDGMSLTDCISWNAMIAGHFENHECEAGLEL 283
Query: 219 CNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTK 278
M V P+L+ ++ + + +L A +H+L +K G+ + N L+ MY+
Sbjct: 284 FLHMLEDEVEPNLMTITSVTVASGLLSDLDFAKEIHALAVKRGFATDVAFCNSLIQMYSS 343
Query: 279 CGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATT 338
G + A VF + + WT+MI GY + G+P +A+ ++ + +V P++ T+A+
Sbjct: 344 LGRMGEACTVFSRMETRDAMSWTAMISGYEKNGFPDKALEVYALMEVNNVSPDDVTVASA 403
Query: 339 LSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDL 398
L+ACA LG L G ++ E G V +L+ M++K I KA EVF+ +PDKD+
Sbjct: 404 LAACASLGRLDVGIKLHELATSKGFIRYIVVANALVEMYAKSKIIEKAIEVFKYMPDKDV 463
Query: 399 AVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVY 437
WS+MI G+ + +AL F M + +KP++V +
Sbjct: 464 ISWSSMIAGFCFNHKNFEALYYFRHM--LADVKPNSVTF 500
>gi|356577059|ref|XP_003556647.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Glycine max]
Length = 821
Score = 342 bits (877), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 198/626 (31%), Positives = 333/626 (53%), Gaps = 9/626 (1%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI N E + M + NS+T LKAC ++ G + ++ G
Sbjct: 116 MIAGFLRNQQHMEVPRLFRMMGSCDIEINSYTCMFALKACTDLLDDEVGMEIIRAAVRRG 175
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F +V + +++ K ++KV D MP + VV WNSII + + L E+I +
Sbjct: 176 FHLHLYVGSSMVNFLVKRGYLADAQKVFDGMPEK--DVVCWNSIIGGYVQKGLFWESIQM 233
Query: 121 LKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
EM GL S T +++ C + G+ H V LG+ N++ + S++ MY+
Sbjct: 234 FLEMIGGGLRPSPVTMANLLKACGQSGLKKVGMCAHSYVLALGM-GNDVFVLTSLVDMYS 292
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
G A +FD + S++SW +I GYV G + E++ L ++ + D ++
Sbjct: 293 NLGDTGSAALVFDSMCSRSLISWNAMISGYVQNGMIPESYALFRRLVQSGSGFDSGTLVS 352
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
LI GC+Q +L +HS +++ + L +V MY+KCG ++ A VF + +K+
Sbjct: 353 LIRGCSQTSDLENGRILHSCIIRKELESHLVLSTAIVDMYSKCGAIKQATIVFGRMGKKN 412
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEE 356
V WT+M+ G +Q GY +A+ LF ++ + V N TL + + CA LGSL+KG+ +
Sbjct: 413 VITWTAMLVGLSQNGYAEDALKLFCQMQEEKVAANSVTLVSLVHCCAHLGSLTKGRTVHA 472
Query: 357 YIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVF-ERVPDKDLAVWSAMINGYAIHGMGD 415
+ + +G + + ++LI M++KCG+I+ A+++F KD+ + ++MI GY +HG G
Sbjct: 473 HFIRHGYAFDAVITSALIDMYAKCGKIHSAEKLFNNEFHLKDVILCNSMIMGYGMHGHGR 532
Query: 416 QALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLC 475
AL ++ +M E LKP+ + S+L+ACSHSG+V++G + F SM+ + + P +HY C
Sbjct: 533 YALGVYSRMIE-ERLKPNQTTFVSLLTACSHSGLVEEGKALFHSMERDHDVRPQHKHYAC 591
Query: 476 LVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGS 535
LVDL RAGR + A + + +MP + V LLS C H N +G A L++L+ +
Sbjct: 592 LVDLHSRAGRLEEADELVKQMPFQPSTDVLEALLSGCRTHKNTNMGIQIADRLISLDYLN 651
Query: 536 TGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLS 595
+G Y++++N++ A W+ RGLM + + K PG+S +E+ V F A D SH
Sbjct: 652 SGIYVMLSNIYAEARKWESVNYIRGLMRMQGMKKIPGYSLIEVGNKVYTFFASDDSHPSW 711
Query: 596 VDIRKTLKELHIKLLEAGYIAEADIV 621
DI + L+ L +++ GYI + V
Sbjct: 712 ADIYQLLENLRLEVEAEGYIPDTSCV 737
Score = 179 bits (454), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 122/464 (26%), Positives = 225/464 (48%), Gaps = 33/464 (7%)
Query: 44 NSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNS 103
N++ K +H+ ++K ++F+ LI +YS +R V D+ + +V N+
Sbjct: 58 NTLIHVKSIHAQIIKNWVSTESFLAAKLIRVYSDLGFLGHARNVFDQCSLPETAVC--NA 115
Query: 104 IISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCS---------------FRQG 148
+I+ R + E + + M +E+++ T + + C+ R+G
Sbjct: 116 MIAGFLRNQQHMEVPRLFRMMGSCDIEINSYTCMFALKACTDLLDDEVGMEIIRAAVRRG 175
Query: 149 ISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVN 208
+H + + +S+++ K G + +A+ +FD + E +V W +IIGGYV
Sbjct: 176 FHLH------------LYVGSSMVNFLVKRGYLADAQKVFDGMPEKDVVCWNSIIGGYVQ 223
Query: 209 VGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPL 268
G E+ + +M + P V NL+ C Q G + + HS +L G N+ +
Sbjct: 224 KGLFWESIQMFLEMIGGGLRPSPVTMANLLKACGQSGLKKVGMCAHSYVLALGMGNDVFV 283
Query: 269 DNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSV 328
LV MY+ GD A VFD++ +S+ W +MI GY Q G E+ LF+RL+++
Sbjct: 284 LTSLVDMYSNLGDTGSAALVFDSMCSRSLISWNAMISGYVQNGMIPESYALFRRLVQSGS 343
Query: 329 RPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKE 388
+ TL + + C++ L G+ + I+ LES+ + T+++ M+SKCG I +A
Sbjct: 344 GFDSGTLVSLIRGCSQTSDLENGRILHSCIIRKELESHLVLSTAIVDMYSKCGAIKQATI 403
Query: 389 VFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSG 448
VF R+ K++ W+AM+ G + +G + AL LF +MQ E + ++V S++ C+H G
Sbjct: 404 VFGRMGKKNVITWTAMLVGLSQNGYAEDALKLFCQMQE-EKVAANSVTLVSLVHCCAHLG 462
Query: 449 MVDDGLSFFKS-MQSNFGIEPSIEHYLCLVDLLGRAGRFDLALK 491
+ G + ++ + + I L+D+ + G+ A K
Sbjct: 463 SLTKGRTVHAHFIRHGYAFDAVITS--ALIDMYAKCGKIHSAEK 504
>gi|449471512|ref|XP_004153331.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 607
Score = 342 bits (877), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 189/597 (31%), Positives = 331/597 (55%), Gaps = 10/597 (1%)
Query: 21 MLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSD 80
M+ +H + T+P VL++C++ +++ G+ +H +++K+GF V T L +MY +C +
Sbjct: 1 MVAKSMHPDEETYPFVLRSCSSFSNVGFGRTIHGYLVKLGFDLFDVVATALAEMYEECIE 60
Query: 81 FVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAIL-VLKEMWVLGLELSASTFVSV 139
F ++ ++ D+ V+ + W S ++ N E I V M L + TF ++
Sbjct: 61 FENAHQLFDKRSVK---DLGWPSSLTTEGPQNDNGEGIFRVFGRMIAEQLVPDSFTFFNL 117
Query: 140 ---VSGCSFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSI 196
++G + Q + C+ + L+ ++ + +V+S+Y+K + +AR +FD++ E
Sbjct: 118 LRFIAGLNSIQLAKIVHCIAIVSKLSGDLLVNTAVLSLYSKLRSLVDARKLFDKMPEKDR 177
Query: 197 VSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSL 256
V W +I Y G E L M R + DL L +I AQ+ + H+
Sbjct: 178 VVWNIMIAAYAREGKPTECLELFKSMARSGIRSDLFTALPVISSIAQLKCVDWGKQTHAH 237
Query: 257 LLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEA 316
+L++G +++ + N L+ MY +C L+ A ++F+ + +KSV W++MI GY + G A
Sbjct: 238 ILRNGSDSQVSVHNSLIDMYCECKILDSACKIFNWMTDKSVISWSAMIKGYVKNGQSLTA 297
Query: 317 VNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHM 376
++LF ++ ++ + + L A +G+L K + Y + GL S + T+L+
Sbjct: 298 LSLFSKMKSDGIQADFVIMINILPAFVHIGALENVKYLHGYSMKLGLTSLPSLNTALLIT 357
Query: 377 FSKCGRINKAKEVFE--RVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDA 434
++KCG I A+ +FE ++ DKDL +W++MI+ +A HG Q L+ +M+ KPD
Sbjct: 358 YAKCGSIEMAQRLFEEEKIDDKDLIMWNSMISAHANHGDWSQCFKLYNRMK-CSNSKPDQ 416
Query: 435 VVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIH 494
V + +L+AC +SG+V+ G FFK M ++G +PS EHY C+V+LLGRAG A + +
Sbjct: 417 VTFLGLLTACVNSGLVEKGKEFFKEMTESYGCQPSQEHYACMVNLLGRAGLISEAGELVK 476
Query: 495 EMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKE 554
MP++ A+VW PLLSAC H +L E+AA+ L+ + P + GNYIL++N++ +AG W
Sbjct: 477 NMPIKPDARVWGPLLSACKMHPGSKLAEFAAEKLINMEPRNAGNYILLSNIYAAAGKWDG 536
Query: 555 AATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKELHIKLLE 611
A R + ++ L K PG S +EI+G V F D++H + DI L L +++ E
Sbjct: 537 VAKMRSFLRNKGLKKIPGCSWLEINGHVTEFRVADQTHPRAGDIYTILGNLELEIKE 593
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 112/413 (27%), Positives = 211/413 (51%), Gaps = 11/413 (2%)
Query: 7 NNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAF 66
N + E + M+ + +SFTF +L+ A +NSI K VH + D
Sbjct: 88 QNDNGEGIFRVFGRMIAEQLVPDSFTFFNLLRFIAGLNSIQLAKIVHCIAIVSKLSGDLL 147
Query: 67 VQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWV 126
V T ++ +YSK V +RK+ D+MP + R V WN +I+A++R E + + K M
Sbjct: 148 VNTAVLSLYSKLRSLVDARKLFDKMPEKDR--VVWNIMIAAYAREGKPTECLELFKSMAR 205
Query: 127 LGLELSASTFVSVVSGCSFRQ----GISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVN 182
G+ T + V+S + + G H + + G ++++ + NS++ MY + ++
Sbjct: 206 SGIRSDLFTALPVISSIAQLKCVDWGKQTHAHILRNG-SDSQVSVHNSLIDMYCECKILD 264
Query: 183 EARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCA 242
A IF+ + + S++SW+ +I GYV G A L ++M+ + D V+ +N++
Sbjct: 265 SACKIFNWMTDKSVISWSAMIKGYVKNGQSLTALSLFSKMKSDGIQADFVIMINILPAFV 324
Query: 243 QVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVF--DAVLEKSVFLW 300
+G L +H +K G + L+ L+ Y KCG +E+A+R+F + + +K + +W
Sbjct: 325 HIGALENVKYLHGYSMKLGLTSLPSLNTALLITYAKCGSIEMAQRLFEEEKIDDKDLIMW 384
Query: 301 TSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKE-IEEYIV 359
SMI +A G S+ L+ R+ ++ +P++ T L+AC G + KGKE +E
Sbjct: 385 NSMISAHANHGDWSQCFKLYNRMKCSNSKPDQVTFLGLLTACVNSGLVEKGKEFFKEMTE 444
Query: 360 LNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDK-DLAVWSAMINGYAIH 411
G + +++ ++++ + G I++A E+ + +P K D VW +++ +H
Sbjct: 445 SYGCQPSQEHYACMVNLLGRAGLISEAGELVKNMPIKPDARVWGPLLSACKMH 497
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 125/257 (48%), Gaps = 21/257 (8%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI G E L + SM ++G+ + FT V+ + A + + GK+ H+H+L+ G
Sbjct: 183 MIAAYAREGKPTECLELFKSMARSGIRSDLFTALPVISSIAQLKCVDWGKQTHAHILRNG 242
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
V LIDMY +C S+ K+ + M +SV+SW+++I + + + A+ +
Sbjct: 243 SDSQVSVHNSLIDMYCECKILDSACKIFNWMTD--KSVISWSAMIKGYVKNGQSLTALSL 300
Query: 121 LKEMWVLGLE---------LSASTFVSVVSGCSFRQGISMHCCVYKLGLLNNEIPLANSV 171
+M G++ L A + + + G SM KLGL +P N+
Sbjct: 301 FSKMKSDGIQADFVIMINILPAFVHIGALENVKYLHGYSM-----KLGL--TSLPSLNTA 353
Query: 172 MSM-YAKFGKVNEARSIFDE--IGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVT 228
+ + YAK G + A+ +F+E I + ++ W ++I + N G+ ++ F L N+M+ +
Sbjct: 354 LLITYAKCGSIEMAQRLFEEEKIDDKDLIMWNSMISAHANHGDWSQCFKLYNRMKCSNSK 413
Query: 229 PDLVVFLNLILGCAQVG 245
PD V FL L+ C G
Sbjct: 414 PDQVTFLGLLTACVNSG 430
>gi|218188593|gb|EEC71020.1| hypothetical protein OsI_02714 [Oryza sativa Indica Group]
Length = 825
Score = 342 bits (877), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 185/593 (31%), Positives = 320/593 (53%), Gaps = 9/593 (1%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
++ +G + + + + ++++G + +T P VLK C + G+ VH V+K G
Sbjct: 233 LLNEYARDGDYAKVMLVFDKLVESGDEISKYTLPTVLKCCMELGLAKSGQAVHGLVIKRG 292
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+ D + LI+MYSKC + +V + VV + +IS R + EA +
Sbjct: 293 LETDRVLNNCLIEMYSKCLSAEDAYEVFAR--IDEPDVVHCSLMISCFDRHDMAPEAFDI 350
Query: 121 LKEMWVLGLELSASTFVSVVSGCSFRQGI----SMHCCVYKLGLLNNEIPLANSVMSMYA 176
+M +G++ + TFV + S + S+H + K G + + ++++ MY
Sbjct: 351 FMQMSDMGVKPNQYTFVGLAIVASRTGDVNLCRSIHAHIVKSGFSRTK-GVCDAIVGMYV 409
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K G V +A FD + I SW T++ G+ + N + ++ V + ++
Sbjct: 410 KTGAVQDAILAFDLMQGPDIASWNTLLSGFYSGNNCEHGLRIFKELICEGVLANKYTYVG 469
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
++ C + +L +H+ +LKSG+ + + +L+ MY + G AR VFD + E+
Sbjct: 470 ILRCCTSLMDLRFGCQVHACVLKSGFQGDYDVSKMLLDMYVQAGCFTNARLVFDRLKERD 529
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEE 356
VF WT ++ YA+ +A+ F+ +L+ + RPN+ATLAT+LS C++L L G ++
Sbjct: 530 VFSWTVVMSTYAKTDEGEKAIECFRSMLRENKRPNDATLATSLSVCSDLACLGSGLQLHS 589
Query: 357 YIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQ 416
Y + +G S+ V ++L+ M+ KCG + A+ +F+ DL W+ +I GYA HG G +
Sbjct: 590 YTIKSGWNSS-VVSSALVDMYVKCGNLADAEMLFDESDTHDLVEWNTIICGYAQHGHGYK 648
Query: 417 ALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCL 476
AL F +M EG PD + + +LSACSH+G++D+G +FK + S +GI P++EHY C+
Sbjct: 649 ALEAFQEMID-EGNVPDEITFVGVLSACSHAGLLDEGRRYFKLLSSVYGITPTLEHYACM 707
Query: 477 VDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGST 536
VD+L +AG+ A I+EMP+ A +W +L AC H N+E+ E AA+ L P
Sbjct: 708 VDILAKAGKLAEAESLINEMPLTPDASLWKTILGACRMHGNIEIAERAAEKLFESQPDDI 767
Query: 537 GNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGD 589
+ IL++N++ W + A R ++ DR + KEPG S +EI+G + VF++ D
Sbjct: 768 SSCILLSNIYADLKRWNDVAKLRSMLVDRGVKKEPGCSWIEINGKLHVFLSQD 820
Score = 179 bits (453), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 119/460 (25%), Positives = 220/460 (47%), Gaps = 8/460 (1%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
M+ T G L ++ M + GV N F LKAC + + +VH+ +K+
Sbjct: 132 MVSAITAAGDAGAALRLFAEMSEEGVVPNGFALAAALKACTVGSDLGFTPQVHAQAVKLE 191
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
D +V + L++ Y C + + + L + PV RS VSWN++++ ++R + +LV
Sbjct: 192 GLFDPYVSSSLVEAYVSCGEVDVAERALLDSPV--RSDVSWNALLNEYARDGDYAKVMLV 249
Query: 121 LKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
++ G E+S T +V+ C + G ++H V K GL + + L N ++ MY+
Sbjct: 250 FDKLVESGDEISKYTLPTVLKCCMELGLAKSGQAVHGLVIKRGLETDRV-LNNCLIEMYS 308
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K +A +F I E +V + +I + EAF + QM M V P+ F+
Sbjct: 309 KCLSAEDAYEVFARIDEPDVVHCSLMISCFDRHDMAPEAFDIFMQMSDMGVKPNQYTFVG 368
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
L + ++ G++ L S+H+ ++KSG++ + + +V MY K G ++ A FD +
Sbjct: 369 LAIVASRTGDVNLCRSIHAHIVKSGFSRTKGVCDAIVGMYVKTGAVQDAILAFDLMQGPD 428
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEE 356
+ W +++ G+ + +FK L+ V N+ T L C L L G ++
Sbjct: 429 IASWNTLLSGFYSGNNCEHGLRIFKELICEGVLANKYTYVGILRCCTSLMDLRFGCQVHA 488
Query: 357 YIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQ 416
++ +G + + V L+ M+ + G A+ VF+R+ ++D+ W+ +++ YA G++
Sbjct: 489 CVLKSGFQGDYDVSKMLLDMYVQAGCFTNARLVFDRLKERDVFSWTVVMSTYAKTDEGEK 548
Query: 417 ALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSF 456
A+ F M E +P+ + LS CS + GL
Sbjct: 549 AIECFRSMLR-ENKRPNDATLATSLSVCSDLACLGSGLQL 587
Score = 145 bits (365), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 100/419 (23%), Positives = 194/419 (46%), Gaps = 10/419 (2%)
Query: 32 TFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEM 91
++ L+ CA ++ GK +H+ +L+ G + DAF+ L++MY KC +R V D M
Sbjct: 62 SYAAALQGCAASRALRRGKALHARLLRSGPRPDAFLHDSLLNMYCKCGRLADARSVFDGM 121
Query: 92 PVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCSFRQGI-- 149
P R VV+W +++SA + A A+ + EM G+ + + + C+ +
Sbjct: 122 P--HRDVVAWTAMVSAITAAGDAGAALRLFAEMSEEGVVPNGFALAAALKACTVGSDLGF 179
Query: 150 --SMHCCVYKL-GLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGY 206
+H KL GL + + ++S++ Y G+V+ A + S VSW ++ Y
Sbjct: 180 TPQVHAQAVKLEGLFDPYV--SSSLVEAYVSCGEVDVAERALLDSPVRSDVSWNALLNEY 237
Query: 207 VNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNED 266
G+ + + +++ ++ C ++G ++H L++K G +
Sbjct: 238 ARDGDYAKVMLVFDKLVESGDEISKYTLPTVLKCCMELGLAKSGQAVHGLVIKRGLETDR 297
Query: 267 PLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKT 326
L+N L+ MY+KC E A VF + E V + MI + + EA ++F ++
Sbjct: 298 VLNNCLIEMYSKCLSAEDAYEVFARIDEPDVVHCSLMISCFDRHDMAPEAFDIFMQMSDM 357
Query: 327 SVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKA 386
V+PN+ T + G ++ + I +IV +G + V +++ M+ K G + A
Sbjct: 358 GVKPNQYTFVGLAIVASRTGDVNLCRSIHAHIVKSGFSRTKGVCDAIVGMYVKTGAVQDA 417
Query: 387 KEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACS 445
F+ + D+A W+ +++G+ + L +F ++ EG+ + Y IL C+
Sbjct: 418 ILAFDLMQGPDIASWNTLLSGFYSGNNCEHGLRIFKELI-CEGVLANKYTYVGILRCCT 475
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 83/321 (25%), Positives = 161/321 (50%), Gaps = 6/321 (1%)
Query: 135 TFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDE 190
++ + + GC+ R+G ++H + + G + L +S+++MY K G++ +ARS+FD
Sbjct: 62 SYAAALQGCAASRALRRGKALHARLLRSGPRPDAF-LHDSLLNMYCKCGRLADARSVFDG 120
Query: 191 IGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLA 250
+ +V+WT ++ G+ A L +M V P+ + C +L
Sbjct: 121 MPHRDVVAWTAMVSAITAAGDAGAALRLFAEMSEEGVVPNGFALAAALKACTVGSDLGFT 180
Query: 251 LSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQL 310
+H+ +K + + + LV Y CG++++A R +S W +++ YA+
Sbjct: 181 PQVHAQAVKLEGLFDPYVSSSLVEAYVSCGEVDVAERALLDSPVRSDVSWNALLNEYARD 240
Query: 311 GYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQ 370
G ++ + +F +L+++ ++ TL T L C ELG G+ + ++ GLE++R +
Sbjct: 241 GDYAKVMLVFDKLVESGDEISKYTLPTVLKCCMELGLAKSGQAVHGLVIKRGLETDRVLN 300
Query: 371 TSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGL 430
LI M+SKC A EVF R+ + D+ S MI+ + H M +A ++F +M + G+
Sbjct: 301 NCLIEMYSKCLSAEDAYEVFARIDEPDVVHCSLMISCFDRHDMAPEAFDIFMQMSDM-GV 359
Query: 431 KPDAVVYTSILSACSHSGMVD 451
KP+ + + S +G V+
Sbjct: 360 KPNQYTFVGLAIVASRTGDVN 380
>gi|225427607|ref|XP_002269121.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19220,
mitochondrial [Vitis vinifera]
Length = 828
Score = 342 bits (877), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 193/560 (34%), Positives = 313/560 (55%), Gaps = 15/560 (2%)
Query: 26 VHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSR 85
V +S T +++ CA + + +G+ VH L+ D V LIDMYSKC D +
Sbjct: 274 VQPDSVTVVIIIPLCAELMLLREGRAVHGLTLRREMGLDFSVTNSLIDMYSKCKDVKRAE 333
Query: 86 KVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCS- 144
V +P R +VSWN++IS +S+ + EA + +++ + S ST ++++ C
Sbjct: 334 HVFKAIPER--DLVSWNAMISGYSQNGHSREAQHLFRQLLQSYSQCSLSTLLAILPSCDS 391
Query: 145 --FRQ-GISMHCCVYKLGLLNNEIPLA-NSVMSMYAKFGKVNEARSIFDEIGETS-IVSW 199
F Q G S+HC KLG NN PLA NS+M MY G + S+ + + IV W
Sbjct: 392 SEFLQFGESIHCWQLKLGFANN--PLAVNSLMLMYINCGDLVACFSLLQTVSAAADIVCW 449
Query: 200 TTIIGGYVNVGNVNEAFGLCNQMRR-MSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLL 258
T++ G G+ EA N MR+ V D V N+I C + LF S+H L L
Sbjct: 450 NTVMAGCTQNGHFWEALKAFNLMRQDPDVCHDSVALFNVISACGNLELLFAGGSLHGLAL 509
Query: 259 KSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVN 318
K+ ++ + N L++MY +CG++E AR +F +++ W MI ++Q A+
Sbjct: 510 KTLMESDIRVQNALITMYGRCGEIENARIIFGFSCNRNLCSWNCMISAFSQNKDGRRALE 569
Query: 319 LFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFS 378
LF + PNE T+ LSAC +LG L GK+I +++ + L+ N V +L M+S
Sbjct: 570 LFCHI---EFEPNEITIVGILSACTQLGVLRHGKQIHGHVIRSRLQGNSFVSAALEDMYS 626
Query: 379 KCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYT 438
CGR++ A ++F+ P++ +A W++MI+ + H G +A+ LF++M+ G +P +
Sbjct: 627 NCGRLDTAFQIFQSSPERSVAAWNSMISAFGFHSNGGKAIELFHEMREC-GTRPTKSTFI 685
Query: 439 SILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPV 498
S+LSACSHSG+V++GL ++ +M F +E EH++C+VD+LGRAGR A + I +MP
Sbjct: 686 SLLSACSHSGLVNEGLWYYSNMLELFNVEADTEHHVCMVDMLGRAGRLGEAYEFIRQMPT 745
Query: 499 EVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATA 558
+ + VW LLSAC H ++++G A+ L L P + G YI ++N++ +AG WK+A
Sbjct: 746 QPEPGVWGALLSACSYHGDLKMGREVAELLFELEPENVGYYISLSNMYVAAGRWKDAVEL 805
Query: 559 RGLMDDRRLTKEPGWSQVEI 578
R ++ D+ L K +S +++
Sbjct: 806 RRIIQDKGLKKPAAYSLIDV 825
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 133/501 (26%), Positives = 243/501 (48%), Gaps = 20/501 (3%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI S N F ++ + ++ GV +S T +V+ A +++ ++ G+ +H K G
Sbjct: 44 MITASVENQCFGVAVNLFVELMGEGVGLDSTTLLIVVSASSHMGNLTQGRVLHGISFKTG 103
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
D+F+ LIDMY+KC + SS V M R ++SWNS++ + +++
Sbjct: 104 LLSDSFLCNALIDMYAKCGELSSSECVFGGM--EYRDIISWNSMMRGCAYNNYPKKSLWY 161
Query: 121 LKEMWVLGLELSASTFVSVVSGCSFRQGIS----MHCCVYKLGLLN-NEIPLANSVMSMY 175
K+M + + VS + +S +H KLG + + NS++S+Y
Sbjct: 162 FKKMAYSSEQADNVSLTCAVSASALLGELSFGQVIHGWGIKLGYKDISHNSFENSLISLY 221
Query: 176 AKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMS-VTPDLVVF 234
++ + A +F E+ IVSW ++ G + EAF L ++M+ + V PD V
Sbjct: 222 SQCRDIQAAEILFKEMKYKDIVSWNAMLDGLALNQRIWEAFDLLHEMQLLGCVQPDSVTV 281
Query: 235 LNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLE 294
+ +I CA++ L ++H L L+ + + N L+ MY+KC D++ A VF A+ E
Sbjct: 282 VIIIPLCAELMLLREGRAVHGLTLRREMGLDFSVTNSLIDMYSKCKDVKRAEHVFKAIPE 341
Query: 295 KSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEI 354
+ + W +MI GY+Q G+ EA +LF++LL++ + + +TL L +C L G+ I
Sbjct: 342 RDLVSWNAMISGYSQNGHSREAQHLFRQLLQSYSQCSLSTLLAILPSCDSSEFLQFGESI 401
Query: 355 EEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERV-PDKDLAVWSAMINGYAIHGM 413
+ + G +N SL+ M+ CG + + + V D+ W+ ++ G +G
Sbjct: 402 HCWQLKLGFANNPLAVNSLMLMYINCGDLVACFSLLQTVSAAADIVCWNTVMAGCTQNGH 461
Query: 414 GDQALNLFYKMQHVEGLKPDAVVYTSILSACSH-----SGMVDDGLSFFKSMQSNFGIEP 468
+AL F M+ + D+V +++SAC + +G GL+ M+S+ ++
Sbjct: 462 FWEALKAFNLMRQDPDVCHDSVALFNVISACGNLELLFAGGSLHGLALKTLMESDIRVQN 521
Query: 469 SIEHYLCLVDLLGRAGRFDLA 489
+ L+ + GR G + A
Sbjct: 522 A------LITMYGRCGEIENA 536
Score = 158 bits (400), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 126/491 (25%), Positives = 232/491 (47%), Gaps = 17/491 (3%)
Query: 69 TGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLG 128
T L+ YS+ +DF SS + DE + R V+ WN++I+A A+ + E+ G
Sbjct: 11 TSLLTAYSRAADFSSSWALFDE--ILYRDVILWNAMITASVENQCFGVAVNLFVELMGEG 68
Query: 129 LELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEA 184
+ L ++T + VVS S QG +H +K GLL++ L N+++ MYAK G+++ +
Sbjct: 69 VGLDSTTLLIVVSASSHMGNLTQGRVLHGISFKTGLLSDSF-LCNALIDMYAKCGELSSS 127
Query: 185 RSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQV 244
+F + I+SW +++ G ++ +M S D V + A +
Sbjct: 128 ECVFGGMEYRDIISWNSMMRGCAYNNYPKKSLWYFKKMAYSSEQADNVSLTCAVSASALL 187
Query: 245 GNLFLALSMHSLLLKSGYNN--EDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTS 302
G L +H +K GY + + +N L+S+Y++C D++ A +F + K + W +
Sbjct: 188 GELSFGQVIHGWGIKLGYKDISHNSFENSLISLYSQCRDIQAAEILFKEMKYKDIVSWNA 247
Query: 303 MIGGYAQLGYPSEAVNLFKRL-LKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLN 361
M+ G A EA +L + L V+P+ T+ + CAEL L +G+ + +
Sbjct: 248 MLDGLALNQRIWEAFDLLHEMQLLGCVQPDSVTVVIIIPLCAELMLLREGRAVHGLTLRR 307
Query: 362 GLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLF 421
+ + V SLI M+SKC + +A+ VF+ +P++DL W+AMI+GY+ +G +A +LF
Sbjct: 308 EMGLDFSVTNSLIDMYSKCKDVKRAEHVFKAIPERDLVSWNAMISGYSQNGHSREAQHLF 367
Query: 422 YKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFK-SMQSNFGIEPSIEHYLCLVDLL 480
++ + +IL +C S + G S ++ F P + L L+ +
Sbjct: 368 RQLLQSYS-QCSLSTLLAILPSCDSSEFLQFGESIHCWQLKLGFANNPLAVNSLMLMYI- 425
Query: 481 GRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKH-HNVELGEYAAKNLLTLNPGSTGNY 539
G + + W +++ C ++ H E A NL+ +P +
Sbjct: 426 -NCGDLVACFSLLQTVSAAADIVCWNTVMAGCTQNGHFWE--ALKAFNLMRQDPDVCHDS 482
Query: 540 ILMANLFTSAG 550
+ + N+ ++ G
Sbjct: 483 VALFNVISACG 493
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 93/372 (25%), Positives = 180/372 (48%), Gaps = 14/372 (3%)
Query: 165 IPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRR 224
+P + S+++ Y++ + + ++FDEI ++ W +I V A L ++
Sbjct: 7 LPTSTSLLTAYSRAADFSSSWALFDEILYRDVILWNAMITASVENQCFGVAVNLFVELMG 66
Query: 225 MSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLEL 284
V D L ++ + +GNL +H + K+G ++ L N L+ MY KCG+L
Sbjct: 67 EGVGLDSTTLLIVVSASSHMGNLTQGRVLHGISFKTGLLSDSFLCNALIDMYAKCGELSS 126
Query: 285 ARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAE 344
+ VF + + + W SM+ G A YP +++ FK++ +S + + +L +SA A
Sbjct: 127 SECVFGGMEYRDIISWNSMMRGCAYNNYPKKSLWYFKKMAYSSEQADNVSLTCAVSASAL 186
Query: 345 LGSLSKGKEIEEYIVLNGLE--SNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWS 402
LG LS G+ I + + G + S+ + SLI ++S+C I A+ +F+ + KD+ W+
Sbjct: 187 LGELSFGQVIHGWGIKLGYKDISHNSFENSLISLYSQCRDIQAAEILFKEMKYKDIVSWN 246
Query: 403 AMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACS-----HSGMVDDGLSFF 457
AM++G A++ +A +L ++MQ + ++PD+V I+ C+ G GL+
Sbjct: 247 AMLDGLALNQRIWEAFDLLHEMQLLGCVQPDSVTVVIIIPLCAELMLLREGRAVHGLTLR 306
Query: 458 KSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHN 517
+ M +F + S L+D+ + A +P E W ++S ++ +
Sbjct: 307 REMGLDFSVTNS------LIDMYSKCKDVKRAEHVFKAIP-ERDLVSWNAMISGYSQNGH 359
Query: 518 VELGEYAAKNLL 529
++ + LL
Sbjct: 360 SREAQHLFRQLL 371
>gi|255584337|ref|XP_002532904.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527338|gb|EEF29484.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 604
Score = 342 bits (877), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 200/595 (33%), Positives = 318/595 (53%), Gaps = 31/595 (5%)
Query: 37 LKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLR 96
L C + N I K VH+ ++K D +V LI +S C + V ++ ++
Sbjct: 30 LHKCTDFNHI---KEVHAQIIKRNLHNDLYVAPKLISAFSLCHQMNLAVNVFNQ--IQDP 84
Query: 97 SVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCSFRQGIS----MH 152
+V +N++I AH + + +A +M GL T+ ++ C+ + + +H
Sbjct: 85 NVHLYNTLIRAHVQNSQSLKAFATFFDMQKNGLFADNFTYPFLLKACNGKGWLPTVQMIH 144
Query: 153 CCVYKLGLLNNEIPLANSVMSMYAKFG--KVNEARSIFDEIGETSIVSWTTIIGGYVNVG 210
C V K G ++ + NS++ Y+K G VN A +F E+GE +VSW ++IGG V G
Sbjct: 145 CHVEKYGFFG-DLFVPNSLIDSYSKCGLLGVNYAMKLFMEMGEKDLVSWNSMIGGLVKAG 203
Query: 211 NVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDN 270
++ A L ++M D V + ++ G + G + A ++ + P N
Sbjct: 204 DLGRARKLFDEM----AERDAVSWNTILDGYVKAGEMSQAFNLFEKM---------PERN 250
Query: 271 L-----LVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLK 325
+ +VS Y K GD+E+AR +FD + K++ WT +I G+A+ G EA L+ ++
Sbjct: 251 VVSWSTMVSGYCKTGDMEMARMLFDKMPFKNLVTWTIIISGFAEKGLAKEATTLYNQMEA 310
Query: 326 TSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINK 385
++P++ TL + L+ACAE G L GK++ I ++ + V +L+ M++KCGR++K
Sbjct: 311 AGLKPDDGTLISILAACAESGLLVLGKKVHASIKKIRIKCSVNVSNALVDMYAKCGRVDK 370
Query: 386 AKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACS 445
A +F + +DL W+ M+ G A+HG G++A+ LF KMQ EG KPD V +IL AC+
Sbjct: 371 ALSIFNEMSMRDLVSWNCMLQGLAMHGHGEKAIQLFSKMQQ-EGFKPDKVTLIAILCACT 429
Query: 446 HSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVW 505
H+G VD GLS+F SM+ + GI P IEHY C++DLLGR GR + A + + MP+E +W
Sbjct: 430 HAGFVDQGLSYFNSMERDHGIVPHIEHYGCMIDLLGRGGRLEEAFRLVQSMPMEPNDVIW 489
Query: 506 APLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDR 565
LL AC H+ V L E L+TL GNY +++N+F +AG W A R M
Sbjct: 490 GTLLGACRVHNAVPLAEKVLDRLITLEQSDPGNYSMLSNIFAAAGDWNSVANMRLQMKST 549
Query: 566 RLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKELHIKLLEAGYIAEADI 620
+ K G S +E+D V F D+SH + I + L +L L + Y EAD+
Sbjct: 550 GVQKPSGASSIELDDEVHEFTVFDKSHPETDKIYQILVKLGQDLKQVAYAPEADL 604
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 110/418 (26%), Positives = 199/418 (47%), Gaps = 17/418 (4%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+IR N + +T+ M + G+ ++FT+P +LKAC + + +H HV K G
Sbjct: 92 LIRAHVQNSQSLKAFATFFDMQKNGLFADNFTYPFLLKACNGKGWLPTVQMIHCHVEKYG 151
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F D FV LID YSKC + + M + + +VSWNS+I +A A +
Sbjct: 152 FFGDLFVPNSLIDSYSKCGLLGVNYAMKLFMEMGEKDLVSWNSMIGGLVKAGDLGRARKL 211
Query: 121 LKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGK 180
EM E A ++ +++ G +S +++ N + + +++S Y K G
Sbjct: 212 FDEM----AERDAVSWNTILDGYVKAGEMSQAFNLFEKMPERNVVSWS-TMVSGYCKTGD 266
Query: 181 VNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILG 240
+ AR +FD++ ++V+WT II G+ G EA L NQM + PD ++++
Sbjct: 267 MEMARMLFDKMPFKNLVTWTIIISGFAEKGLAKEATTLYNQMEAAGLKPDDGTLISILAA 326
Query: 241 CAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLW 300
CA+ G L L +H+ + K + N LV MY KCG ++ A +F+ + + + W
Sbjct: 327 CAESGLLVLGKKVHASIKKIRIKCSVNVSNALVDMYAKCGRVDKALSIFNEMSMRDLVSW 386
Query: 301 TSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVL 360
M+ G A G+ +A+ LF ++ + +P++ TL L AC G + +G
Sbjct: 387 NCMLQGLAMHGHGEKAIQLFSKMQQEGFKPDKVTLIAILCACTHAGFVDQGLS-----YF 441
Query: 361 NGLESNRQVQTSLIH------MFSKCGRINKAKEVFERVP-DKDLAVWSAMINGYAIH 411
N +E + + + H + + GR+ +A + + +P + + +W ++ +H
Sbjct: 442 NSMERDHGIVPHIEHYGCMIDLLGRGGRLEEAFRLVQSMPMEPNDVIWGTLLGACRVH 499
>gi|242058523|ref|XP_002458407.1| hypothetical protein SORBIDRAFT_03g032890 [Sorghum bicolor]
gi|241930382|gb|EES03527.1| hypothetical protein SORBIDRAFT_03g032890 [Sorghum bicolor]
Length = 695
Score = 342 bits (876), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 195/603 (32%), Positives = 307/603 (50%), Gaps = 81/603 (13%)
Query: 12 EETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGL 71
+E + SS+ + G S PLVLK+CA + G + H H L G D FVQT L
Sbjct: 156 QEFIEVVSSLHRRGGAIPSGCIPLVLKSCAQSAASCQGSQTHCHALVRGMLGDVFVQTAL 215
Query: 72 IDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLEL 131
+D Y+K D D A++ KEM V
Sbjct: 216 VDFYAKNGDM---------------------------------DSALMAFKEMPV----- 237
Query: 132 SASTFVSVVSGCSFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEI 191
+ IP+ N +++ Y+K G V EAR +FD +
Sbjct: 238 ------------------------------KDPIPM-NCLITGYSKSGDVEEARRLFDSM 266
Query: 192 GETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLAL 251
+ SW ++I Y + G EA L +QM R +P+ + + CA+ G+L
Sbjct: 267 PRRTSASWNSMIACYAHGGEFREALTLFDQMLREGASPNAITITTVFSICAKTGDLDTGR 326
Query: 252 SMHSLLLKSGYNNEDPLDNLLV-----SMYTKCGDLELARRVFDAVLEKSVFLWTSMIGG 306
+ + E+ L N++V MY KC ++ AR FD + + V W++MI G
Sbjct: 327 RARAWI------REEDLQNVIVHTALMEMYVKCRAIDEARHEFDRMPRRDVVAWSTMIAG 380
Query: 307 YAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESN 366
Y+Q G P E++ LF+R+ T+ +PNE TL LSACA+LGS G++I YI L
Sbjct: 381 YSQNGRPHESLELFERMKATNCKPNEVTLVGVLSACAQLGSDELGEQIGNYIESQTLPLT 440
Query: 367 RQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQH 426
+ ++LI M++KCG + +A+ VF R+ K + W++MI G A++G + A+ L+ KM
Sbjct: 441 SYLGSALIDMYTKCGHVARARSVFNRMEQKVVVTWNSMIRGLALNGFAEDAIALYRKMVG 500
Query: 427 VEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRF 486
+G++P+ V + ++L+AC+H+G+VD G++FF+ M+ + P +EH C+VDLL ++GR
Sbjct: 501 -DGIQPNEVTFVALLTACTHAGLVDKGIAFFEEMKKKQHVSPQVEHCACIVDLLCKSGRL 559
Query: 487 DLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLF 546
A K I +M VE A +W+ LLSAC H +VEL + AA L+ L P ++ Y+L++N++
Sbjct: 560 WEAYKFICDMEVEPNAVIWSTLLSACRAHADVELAKLAAGKLVALEPNNSSIYVLLSNIY 619
Query: 547 TSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKELH 606
AG+W + R LM + L K +S +E+DG V F+ D H S +I + L
Sbjct: 620 ADAGLWGDVREIRDLMRSKNLQKLSAYSWIELDGEVHRFLVQDTYHPRSAEIYNVVDGLG 679
Query: 607 IKL 609
++L
Sbjct: 680 LQL 682
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 101/415 (24%), Positives = 176/415 (42%), Gaps = 58/415 (13%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI + G F E L+ + ML+ G N+ T V CA + G+R + + +
Sbjct: 277 MIACYAHGGEFREALTLFDQMLREGASPNAITITTVFSICAKTGDLDTGRRARAWIREED 336
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
Q+ V T L++MY KC +R D MP R VV+W+++I+ +S+ E++ +
Sbjct: 337 L-QNVIVHTALMEMYVKCRAIDEARHEFDRMP--RRDVVAWSTMIAGYSQNGRPHESLEL 393
Query: 121 LKEMWVLGLELSASTFVSVVSGCS------FRQGISMHCCVYKLGLLNNEIPLANSVMSM 174
+ M + + T V V+S C+ + I + L L + L ++++ M
Sbjct: 394 FERMKATNCKPNEVTLVGVLSACAQLGSDELGEQIGNYIESQTLPLTSY---LGSALIDM 450
Query: 175 YAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVF 234
Y K G V ARS+F+ + + +V+W ++I G G +A L +M + P+ V F
Sbjct: 451 YTKCGHVARARSVFNRMEQKVVVTWNSMIRGLALNGFAEDAIALYRKMVGDGIQPNEVTF 510
Query: 235 LNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLE 294
+ L+ C G + ++ + K + + +E + D +L
Sbjct: 511 VALLTACTHAGLVDKGIAFFEEMKKKQHVSP---------------QVEHCACIVD-LLC 554
Query: 295 KSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSAC-----AELGSLS 349
KS LW + +K + V PN +T LSAC EL L+
Sbjct: 555 KSGRLWEA-----------------YKFICDMEVEPNAVIWSTLLSACRAHADVELAKLA 597
Query: 350 KGKEIEEYIVLNGLE-SNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSA 403
GK L LE +N + L ++++ G +E+ + + K+L SA
Sbjct: 598 AGK-------LVALEPNNSSIYVLLSNIYADAGLWGDVREIRDLMRSKNLQKLSA 645
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 94/218 (43%), Gaps = 36/218 (16%)
Query: 267 PLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKT 326
PL LL + T AR +FD V + L + + G ++L E + + L +
Sbjct: 113 PLHALLSNAST----YRAARHLFDVVPRPTAALCCAFLSGLSKLSLHQEFIEVVSSLHRR 168
Query: 327 SVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHM---------- 376
+ L +CA+ + +G + + ++ G+ + VQT+L+
Sbjct: 169 GGAIPSGCIPLVLKSCAQSAASCQGSQTHCHALVRGMLGDVFVQTALVDFYAKNGDMDSA 228
Query: 377 ---------------------FSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGD 415
+SK G + +A+ +F+ +P + A W++MI YA G
Sbjct: 229 LMAFKEMPVKDPIPMNCLITGYSKSGDVEEARRLFDSMPRRTSASWNSMIACYAHGGEFR 288
Query: 416 QALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDG 453
+AL LF +M EG P+A+ T++ S C+ +G +D G
Sbjct: 289 EALTLFDQMLR-EGASPNAITITTVFSICAKTGDLDTG 325
>gi|359481040|ref|XP_002266469.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Vitis vinifera]
Length = 709
Score = 342 bits (876), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 190/617 (30%), Positives = 335/617 (54%), Gaps = 39/617 (6%)
Query: 36 VLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRL 95
+L+ +++ S K++H+ +L+ + + T ++ +YS + S + + +P
Sbjct: 11 LLQNPSSVKSKSQAKQLHAQILRTSLPSPSLLST-ILSIYSNLNLLHDSLLIFNSLP-SP 68
Query: 96 RSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCSF----RQGISM 151
+ ++W SII ++ L ++ +M G + F SV+ C+ R G S+
Sbjct: 69 PTTLAWKSIIRCYTSHGLFLHSLSFFIQMLASGKYPDHNVFPSVLKSCTLMKDLRFGESV 128
Query: 152 HCCVYKLGLLNNEIPLANSVMSMYAKF---GKVNEARSIFDEIGETS------------- 195
H C+ +LG+ ++ N++M+MY+KF +VN + +FDE G+TS
Sbjct: 129 HGCIIRLGM-GFDLYTCNALMNMYSKFWSLEEVNTYKKVFDE-GKTSDVYSKKEKESYYL 186
Query: 196 --------------IVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGC 241
IVSW T+I G G +A + +M + PD +++
Sbjct: 187 GSLRKVFEMMPKRDIVSWNTVISGNAQNGMHEDALMMVREMGNADLRPDSFTLSSVLPIF 246
Query: 242 AQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWT 301
A+ NL +H +++GY+ + + + L+ MY KC ++ + RVF + + W
Sbjct: 247 AEYVNLLKGKEIHGYAIRNGYDADVFIGSSLIDMYAKCTRVDDSCRVFYMLPQHDGISWN 306
Query: 302 SMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLN 361
S+I G Q G E + F+++L ++PN + ++ + ACA L +L GK++ YI+ +
Sbjct: 307 SIIAGCVQNGMFDEGLKFFQQMLIAKIKPNHVSFSSIMPACAHLTTLHLGKQLHGYIIRS 366
Query: 362 GLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLF 421
+ N + ++L+ M++KCG I A+ +F+++ D+ W+AMI GYA+HG A++LF
Sbjct: 367 RFDGNVFIASALVDMYAKCGNIRTARWIFDKMELYDMVSWTAMIMGYALHGHAYDAISLF 426
Query: 422 YKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLG 481
+M+ VEG+KP+ V + ++L+ACSH+G+VD+ +F SM ++ I P +EHY + DLLG
Sbjct: 427 KRME-VEGVKPNYVAFMAVLTACSHAGLVDEAWKYFNSMTQDYRIIPGLEHYAAVADLLG 485
Query: 482 RAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYIL 541
R GR + A + I +M +E VW+ LL+AC H N+EL E +K L T++P + G Y+L
Sbjct: 486 RVGRLEEAYEFISDMHIEPTGSVWSTLLAACRVHKNIELAEKVSKKLFTVDPQNIGAYVL 545
Query: 542 MANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKT 601
++N++++AG WK+A R M D+ + K+P S +EI V FVAGD+SH I +
Sbjct: 546 LSNIYSAAGRWKDARKLRIAMRDKGMKKKPACSWIEIKNKVHAFVAGDKSHPYYDRINEA 605
Query: 602 LKELHIKLLEAGYIAEA 618
LK L ++ GY+ +
Sbjct: 606 LKVLLEQMEREGYVLDT 622
Score = 185 bits (470), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 123/453 (27%), Positives = 226/453 (49%), Gaps = 52/453 (11%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+IR T++G F +LS + ML +G + + FP VLK+C + + G+ VH ++++G
Sbjct: 77 IIRCYTSHGLFLHSLSFFIQMLASGKYPDHNVFPSVLKSCTLMKDLRFGESVHGCIIRLG 136
Query: 61 FQQDAFVQTGLIDMYS------------------KCSDFVSS-----------RKVLDEM 91
D + L++MYS K SD S RKV + M
Sbjct: 137 MGFDLYTCNALMNMYSKFWSLEEVNTYKKVFDEGKTSDVYSKKEKESYYLGSLRKVFEMM 196
Query: 92 PVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVV----SGCSFRQ 147
P R +VSWN++IS +++ ++++A+++++EM L + T SV+ + +
Sbjct: 197 PK--RDIVSWNTVISGNAQNGMHEDALMMVREMGNADLRPDSFTLSSVLPIFAEYVNLLK 254
Query: 148 GISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYV 207
G +H + G + ++ + +S++ MYAK +V+++ +F + + +SW +II G V
Sbjct: 255 GKEIHGYAIRNG-YDADVFIGSSLIDMYAKCTRVDDSCRVFYMLPQHDGISWNSIIAGCV 313
Query: 208 NVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDP 267
G +E QM + P+ V F +++ CA + L L +H +++S ++
Sbjct: 314 QNGMFDEGLKFFQQMLIAKIKPNHVSFSSIMPACAHLTTLHLGKQLHGYIIRSRFDGNVF 373
Query: 268 LDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTS 327
+ + LV MY KCG++ AR +FD + + WT+MI GYA G+ +A++LFKR+
Sbjct: 374 IASALVDMYAKCGNIRTARWIFDKMELYDMVSWTAMIMGYALHGHAYDAISLFKRMEVEG 433
Query: 328 VRPNEATLATTLSACAELGSLSKGKE-----IEEYIVLNGLESNRQVQTSLIHMFSKCGR 382
V+PN L+AC+ G + + + ++Y ++ GLE V L GR
Sbjct: 434 VKPNYVAFMAVLTACSHAGLVDEAWKYFNSMTQDYRIIPGLEHYAAVADLL-------GR 486
Query: 383 INKAKEVFERVPDKDL----AVWSAMINGYAIH 411
+ + +E +E + D + +VWS ++ +H
Sbjct: 487 VGRLEEAYEFISDMHIEPTGSVWSTLLAACRVH 519
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 71/297 (23%), Positives = 136/297 (45%), Gaps = 33/297 (11%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+I NG F+E L + ML + N +F ++ ACA++ ++ GK++H ++++
Sbjct: 308 IIAGCVQNGMFDEGLKFFQQMLIAKIKPNHVSFSSIMPACAHLTTLHLGKQLHGYIIRSR 367
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F + F+ + L+DMY+KC + ++R + D+M L +VSW ++I ++ +AI +
Sbjct: 368 FDGNVFIASALVDMYAKCGNIRTARWIFDKM--ELYDMVSWTAMIMGYALHGHAYDAISL 425
Query: 121 LKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGK 180
K M V G++ + F++V++ CS GL++ NS+ Y
Sbjct: 426 FKRMEVEGVKPNYVAFMAVLTACS------------HAGLVDEAWKYFNSMTQDYRIIPG 473
Query: 181 VNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILG 240
+ ++ D +G VG + EA+ + M + P V+ L+
Sbjct: 474 LEHYAAVADLLGR---------------VGRLEEAYEFISDMH---IEPTGSVWSTLLAA 515
Query: 241 CAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSV 297
C N+ LA + L N LL ++Y+ G + AR++ A+ +K +
Sbjct: 516 CRVHKNIELAEKVSKKLFTVDPQNIGAY-VLLSNIYSAAGRWKDARKLRIAMRDKGM 571
>gi|7523419|emb|CAB86438.1| putative protein [Arabidopsis thaliana]
Length = 1017
Score = 342 bits (876), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 206/622 (33%), Positives = 333/622 (53%), Gaps = 11/622 (1%)
Query: 6 TNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG-FQQD 64
+ +G ETL + M TG NS+T L AC + GK +H+ VLK +
Sbjct: 223 STSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSE 282
Query: 65 AFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEM 124
+V LI MY++C + ++L +M VV+WNS+I + + + EA+ +M
Sbjct: 283 LYVCNALIAMYTRCGKMPQAERILRQM--NNADVVTWNSLIKGYVQNLMYKEALEFFSDM 340
Query: 125 WVLGLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGK 180
G + + S+++ + G+ +H V K G +N + + N+++ MY+K
Sbjct: 341 IAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSN-LQVGNTLIDMYSKCNL 399
Query: 181 VNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILG 240
F + + ++SWTT+I GY EA L + + + D ++ +++
Sbjct: 400 TCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRA 459
Query: 241 CAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLW 300
+ + ++ + +H +L+ G + + N LV +Y KC ++ A RVF+++ K V W
Sbjct: 460 SSVLKSMLIVKEIHCHILRKGLLD-TVIQNELVDVYGKCRNMGYATRVFESIKGKDVVSW 518
Query: 301 TSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVL 360
TSMI A G SEAV LF+R+++T + + L LSA A L +L+KG+EI Y++
Sbjct: 519 TSMISSSALNGNESEAVELFRRMVETGLSADSVALLCILSAAASLSALNKGREIHCYLLR 578
Query: 361 NGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNL 420
G + +++ M++ CG + AK VF+R+ K L +++MIN Y +HG G A+ L
Sbjct: 579 KGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVEL 638
Query: 421 FYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLL 480
F KM+H E + PD + + ++L ACSH+G++D+G F K M+ + +EP EHY+CLVD+L
Sbjct: 639 FDKMRH-ENVSPDHISFLALLYACSHAGLLDEGRGFLKIMEHEYELEPWPEHYVCLVDML 697
Query: 481 GRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYI 540
GRA A + + M E A+VW LL+AC H E+GE AA+ LL L P + GN +
Sbjct: 698 GRANCVVEAFEFVKMMKTEPTAEVWCALLAACRSHSEKEIGEIAAQRLLELEPKNPGNLV 757
Query: 541 LMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRK 600
L++N+F G W + R M + K PG S +E+DG V F A D+SH S +I +
Sbjct: 758 LVSNVFAEQGRWNDVEKVRAKMKASGMEKHPGCSWIEMDGKVHKFTARDKSHPESKEIYE 817
Query: 601 TLKELHIKL-LEAGYIAEADIV 621
L E+ KL E GY+A+ V
Sbjct: 818 KLSEVTRKLEREVGYVADTKFV 839
Score = 215 bits (547), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 145/497 (29%), Positives = 253/497 (50%), Gaps = 13/497 (2%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI +NG L+ Y +M GV +FP +LKACA + I G +HS ++K+G
Sbjct: 116 MIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSGSELHSLLVKLG 175
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+ F+ L+ MY+K D ++R++ D + +V+ WNSI+S++S + + E + +
Sbjct: 176 YHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVL-WNSILSSYSTSGKSLETLEL 234
Query: 121 LKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
+EM + G ++ T VS ++ C + G +H V K ++E+ + N++++MY
Sbjct: 235 FREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYT 294
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
+ GK+ +A I ++ +V+W ++I GYV EA + M D V +
Sbjct: 295 RCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTS 354
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
+I ++ NL + +H+ ++K G+++ + N L+ MY+KC R F + +K
Sbjct: 355 IIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKD 414
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEE 356
+ WT++I GYAQ EA+ LF+ + K + +E L + L A + L S+ KEI
Sbjct: 415 LISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHC 474
Query: 357 YIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQ 416
+I+ GL + +Q L+ ++ KC + A VFE + KD+ W++MI+ A++G +
Sbjct: 475 HILRKGL-LDTVIQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESE 533
Query: 417 ALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKS-MQSNFGIEPSI----- 470
A+ LF +M GL D+V ILSA + ++ G ++ F +E SI
Sbjct: 534 AVELFRRMVET-GLSADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVAVV 592
Query: 471 EHYLCLVDLLGRAGRFD 487
+ Y C DL FD
Sbjct: 593 DMYACCGDLQSAKAVFD 609
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 112/370 (30%), Positives = 185/370 (50%), Gaps = 10/370 (2%)
Query: 82 VSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVS 141
VS KV DEMP R + +WN++I A+ A+ + M V G+ L S+F +++
Sbjct: 96 VSQEKVFDEMPDR--TAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLK 153
Query: 142 GCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGET-SI 196
C+ R G +H + KLG + + N+++SMYAK ++ AR +FD E
Sbjct: 154 ACAKLRDIRSGSELHSLLVKLGYHSTGF-IVNALVSMYAKNDDLSAARRLFDGFQEKGDA 212
Query: 197 VSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSL 256
V W +I+ Y G E L +M P+ ++ + C L +H+
Sbjct: 213 VLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHAS 272
Query: 257 LLKSG-YNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSE 315
+LKS +++E + N L++MYT+CG + A R+ + V W S+I GY Q E
Sbjct: 273 VLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKE 332
Query: 316 AVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIH 375
A+ F ++ + +E ++ + ++A L +L G E+ Y++ +G +SN QV +LI
Sbjct: 333 ALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLID 392
Query: 376 MFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAV 435
M+SKC F R+ DKDL W+ +I GYA + +AL LF + + ++ D +
Sbjct: 393 MYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAK-KRMEIDEM 451
Query: 436 VYTSILSACS 445
+ SIL A S
Sbjct: 452 ILGSILRASS 461
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 92/284 (32%), Positives = 150/284 (52%), Gaps = 4/284 (1%)
Query: 162 NNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQ 221
N+ + V+ + K V++ + +FDE+ + + +W T+IG YV+ G A L
Sbjct: 77 NSPVEAFAYVLELCGKRRAVSQEK-VFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWN 135
Query: 222 MRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGD 281
MR V L F L+ CA++ ++ +HSLL+K GY++ + N LVSMY K D
Sbjct: 136 MRVEGVPLGLSSFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDD 195
Query: 282 LELARRVFDAVLEK-SVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLS 340
L ARR+FD EK LW S++ Y+ G E + LF+ + T PN T+ + L+
Sbjct: 196 LSAARRLFDGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALT 255
Query: 341 ACAELGSLSKGKEIEEYIVLNGLESNR-QVQTSLIHMFSKCGRINKAKEVFERVPDKDLA 399
AC GKEI ++ + S+ V +LI M+++CG++ +A+ + ++ + D+
Sbjct: 256 ACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVV 315
Query: 400 VWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSA 443
W+++I GY + M +AL F M G K D V TSI++A
Sbjct: 316 TWNSLIKGYVQNLMYKEALEFFSDMI-AAGHKSDEVSMTSIIAA 358
>gi|225433310|ref|XP_002282466.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g12770-like [Vitis vinifera]
Length = 625
Score = 342 bits (876), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 199/578 (34%), Positives = 323/578 (55%), Gaps = 20/578 (3%)
Query: 50 KRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHS 109
++ HS +L +G Q++ + T LI Y+ C SR V D + + ++V WNS+I+ ++
Sbjct: 43 RQSHSRILSLGLSQNSLLATKLIFAYAICQHPYHSRLVFDSL--QHKNVFLWNSLINGYA 100
Query: 110 RACLNDEAILVLKEMW---VLGLELSASTFVSVVS--GCSFRQGISMHCCVYKLGLLNNE 164
+ L +EA + +M VL + + ST V S G F G S+H ++G +++
Sbjct: 101 KNRLYNEAFQLFNQMCSSDVLPDDFTLSTLSKVSSELGALF-SGKSIHGKSIRIGFVSDT 159
Query: 165 IPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVN---EAFGLCNQ 221
+ +ANS+MSMY K G E+R +FDE+ + SW +I GY GN N E + Q
Sbjct: 160 V-VANSIMSMYCKCGNFEESRKVFDEMTIRNSGSWNVLIAGYAVSGNCNFREETWEFVKQ 218
Query: 222 MRRMSVTPDLVVFLNLILGC-AQVGNLFLALSMHSLLLKS----GYNNEDPLDNLLVSMY 276
M+ V PD +L+ C G +H ++K+ G +++ L L+ MY
Sbjct: 219 MQMDEVRPDAYTISSLLPLCDGDKGKWDYGRELHCYIVKNELVLGLDSDVHLGCCLIDMY 278
Query: 277 TKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRL-LKTSVRPNEATL 335
++ + + RRVFD + ++VF WT+MI GY + G EA++LF+ + + + PN +L
Sbjct: 279 SRSNKVVVGRRVFDRMKCRNVFSWTAMINGYVENGDSDEALSLFRDMQVIDGIEPNRVSL 338
Query: 336 ATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVP- 394
+ L AC+ L G++I + V L + + +LI M+SKCG ++ A+ VFE
Sbjct: 339 VSVLPACSSFSGLLSGRQIHGFAVRKELNNEVSLCNALIDMYSKCGSLDSARRVFEDDSL 398
Query: 395 DKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGL 454
KD WS+MI+GY +HG G +A+ L+ KM G++PD + ILSACS SG+V++GL
Sbjct: 399 CKDAISWSSMISGYGLHGKGQEAILLYDKMLQA-GIRPDMITTVGILSACSRSGLVNEGL 457
Query: 455 SFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMK 514
+ + S+ +++GIEP++E + C+VD+LGRAG+ D AL I MPVE VW L+S +
Sbjct: 458 NIYSSVINDYGIEPTLEIFACIVDMLGRAGQLDPALDFIKAMPVEPGPSVWGALVSCSII 517
Query: 515 HHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWS 574
H ++E+ E A + L+ L P + NY+ ++NL+ S+ W A R +M D+RL K PG S
Sbjct: 518 HGDLEMQELAYRFLIQLEPENPSNYVSISNLYASSRRWDAVAEVRRMMKDKRLRKVPGCS 577
Query: 575 QVEIDGSVQVFVAGDRSHHLSVDIRKTLKELHIKLLEA 612
+ I+ F D++H + I L +L + + +A
Sbjct: 578 WISINNKTHCFYVADKAHPSATSIYNMLDDLLLTMNDA 615
Score = 206 bits (524), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 125/427 (29%), Positives = 221/427 (51%), Gaps = 17/427 (3%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+I N + E ++ M + V + FT + K + + +++ GK +H +++G
Sbjct: 95 LINGYAKNRLYNEAFQLFNQMCSSDVLPDDFTLSTLSKVSSELGALFSGKSIHGKSIRIG 154
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAH--SRAC-LNDEA 117
F D V ++ MY KC +F SRKV DEM + R+ SWN +I+ + S C +E
Sbjct: 155 FVSDTVVANSIMSMYCKCGNFEESRKVFDEMTI--RNSGSWNVLIAGYAVSGNCNFREET 212
Query: 118 ILVLKEMWVLGLELSASTFVSVVSGCS-----FRQGISMHCCVYKLGL---LNNEIPLAN 169
+K+M + + A T S++ C + G +HC + K L L++++ L
Sbjct: 213 WEFVKQMQMDEVRPDAYTISSLLPLCDGDKGKWDYGRELHCYIVKNELVLGLDSDVHLGC 272
Query: 170 SVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMS-VT 228
++ MY++ KV R +FD + ++ SWT +I GYV G+ +EA L M+ + +
Sbjct: 273 CLIDMYSRSNKVVVGRRVFDRMKCRNVFSWTAMINGYVENGDSDEALSLFRDMQVIDGIE 332
Query: 229 PDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRV 288
P+ V ++++ C+ L +H ++ NNE L N L+ MY+KCG L+ ARRV
Sbjct: 333 PNRVSLVSVLPACSSFSGLLSGRQIHGFAVRKELNNEVSLCNALIDMYSKCGSLDSARRV 392
Query: 289 F-DAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGS 347
F D L K W+SMI GY G EA+ L+ ++L+ +RP+ T LSAC+ G
Sbjct: 393 FEDDSLCKDAISWSSMISGYGLHGKGQEAILLYDKMLQAGIRPDMITTVGILSACSRSGL 452
Query: 348 LSKGKEIEEYIVLN-GLESNRQVQTSLIHMFSKCGRINKAKEVFERVP-DKDLAVWSAMI 405
+++G I ++ + G+E ++ ++ M + G+++ A + + +P + +VW A++
Sbjct: 453 VNEGLNIYSSVINDYGIEPTLEIFACIVDMLGRAGQLDPALDFIKAMPVEPGPSVWGALV 512
Query: 406 NGYAIHG 412
+ IHG
Sbjct: 513 SCSIIHG 519
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 74/257 (28%), Positives = 127/257 (49%), Gaps = 6/257 (2%)
Query: 246 NLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIG 305
+L L HS +L G + L L+ Y C +R VFD++ K+VFLW S+I
Sbjct: 38 SLKLTRQSHSRILSLGLSQNSLLATKLIFAYAICQHPYHSRLVFDSLQHKNVFLWNSLIN 97
Query: 306 GYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLES 365
GYA+ +EA LF ++ + V P++ TL+T +ELG+L GK I + G S
Sbjct: 98 GYAKNRLYNEAFQLFNQMCSSDVLPDDFTLSTLSKVSSELGALFSGKSIHGKSIRIGFVS 157
Query: 366 NRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGD--QALNLFYK 423
+ V S++ M+ KCG ++++VF+ + ++ W+ +I GYA+ G + + F K
Sbjct: 158 DTVVANSIMSMYCKCGNFEESRKVFDEMTIRNSGSWNVLIAGYAVSGNCNFREETWEFVK 217
Query: 424 MQHVEGLKPDAVVYTSILSACS-HSGMVDDGLSFFKSMQSN---FGIEPSIEHYLCLVDL 479
++ ++PDA +S+L C G D G + N G++ + CL+D+
Sbjct: 218 QMQMDEVRPDAYTISSLLPLCDGDKGKWDYGRELHCYIVKNELVLGLDSDVHLGCCLIDM 277
Query: 480 LGRAGRFDLALKTIHEM 496
R+ + + + M
Sbjct: 278 YSRSNKVVVGRRVFDRM 294
>gi|218526158|sp|Q9M1V3.2|PP296_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g63370
Length = 960
Score = 342 bits (876), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 206/627 (32%), Positives = 336/627 (53%), Gaps = 11/627 (1%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
++ + + +G ETL + M TG NS+T L AC + GK +H+ VLK
Sbjct: 255 ILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSS 314
Query: 61 -FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAIL 119
+ +V LI MY++C + ++L +M VV+WNS+I + + + EA+
Sbjct: 315 THSSELYVCNALIAMYTRCGKMPQAERILRQM--NNADVVTWNSLIKGYVQNLMYKEALE 372
Query: 120 VLKEMWVLGLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMY 175
+M G + + S+++ + G+ +H V K G +N + + N+++ MY
Sbjct: 373 FFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSN-LQVGNTLIDMY 431
Query: 176 AKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFL 235
+K F + + ++SWTT+I GY EA L + + + D ++
Sbjct: 432 SKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILG 491
Query: 236 NLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEK 295
+++ + + ++ + +H +L+ G + + N LV +Y KC ++ A RVF+++ K
Sbjct: 492 SILRASSVLKSMLIVKEIHCHILRKGLLD-TVIQNELVDVYGKCRNMGYATRVFESIKGK 550
Query: 296 SVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIE 355
V WTSMI A G SEAV LF+R+++T + + L LSA A L +L+KG+EI
Sbjct: 551 DVVSWTSMISSSALNGNESEAVELFRRMVETGLSADSVALLCILSAAASLSALNKGREIH 610
Query: 356 EYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGD 415
Y++ G + +++ M++ CG + AK VF+R+ K L +++MIN Y +HG G
Sbjct: 611 CYLLRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGK 670
Query: 416 QALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLC 475
A+ LF KM+H E + PD + + ++L ACSH+G++D+G F K M+ + +EP EHY+C
Sbjct: 671 AAVELFDKMRH-ENVSPDHISFLALLYACSHAGLLDEGRGFLKIMEHEYELEPWPEHYVC 729
Query: 476 LVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGS 535
LVD+LGRA A + + M E A+VW LL+AC H E+GE AA+ LL L P +
Sbjct: 730 LVDMLGRANCVVEAFEFVKMMKTEPTAEVWCALLAACRSHSEKEIGEIAAQRLLELEPKN 789
Query: 536 TGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLS 595
GN +L++N+F G W + R M + K PG S +E+DG V F A D+SH S
Sbjct: 790 PGNLVLVSNVFAEQGRWNDVEKVRAKMKASGMEKHPGCSWIEMDGKVHKFTARDKSHPES 849
Query: 596 VDIRKTLKELHIKL-LEAGYIAEADIV 621
+I + L E+ KL E GY+A+ V
Sbjct: 850 KEIYEKLSEVTRKLEREVGYVADTKFV 876
Score = 214 bits (546), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 145/497 (29%), Positives = 253/497 (50%), Gaps = 13/497 (2%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI +NG L+ Y +M GV +FP +LKACA + I G +HS ++K+G
Sbjct: 153 MIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSGSELHSLLVKLG 212
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+ F+ L+ MY+K D ++R++ D + +V+ WNSI+S++S + + E + +
Sbjct: 213 YHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVL-WNSILSSYSTSGKSLETLEL 271
Query: 121 LKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
+EM + G ++ T VS ++ C + G +H V K ++E+ + N++++MY
Sbjct: 272 FREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYT 331
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
+ GK+ +A I ++ +V+W ++I GYV EA + M D V +
Sbjct: 332 RCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTS 391
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
+I ++ NL + +H+ ++K G+++ + N L+ MY+KC R F + +K
Sbjct: 392 IIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKD 451
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEE 356
+ WT++I GYAQ EA+ LF+ + K + +E L + L A + L S+ KEI
Sbjct: 452 LISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHC 511
Query: 357 YIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQ 416
+I+ GL + +Q L+ ++ KC + A VFE + KD+ W++MI+ A++G +
Sbjct: 512 HILRKGL-LDTVIQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESE 570
Query: 417 ALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKS-MQSNFGIEPSI----- 470
A+ LF +M GL D+V ILSA + ++ G ++ F +E SI
Sbjct: 571 AVELFRRMVET-GLSADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVAVV 629
Query: 471 EHYLCLVDLLGRAGRFD 487
+ Y C DL FD
Sbjct: 630 DMYACCGDLQSAKAVFD 646
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 126/422 (29%), Positives = 210/422 (49%), Gaps = 13/422 (3%)
Query: 32 TFPLVLKACANINSIWDGKRVHSHVLKV--GFQQDAFVQTGLIDMYSKCSDFVSSRKVLD 89
F VL+ C ++ G+++HS + K F+ D F+ L+ MY KC + KV D
Sbjct: 82 AFAYVLELCGKRRAVSQGRQLHSRIFKTFPSFELD-FLAGKLVFMYGKCGSLDDAEKVFD 140
Query: 90 EMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCS----F 145
EMP R+ +WN++I A+ A+ + M V G+ L S+F +++ C+
Sbjct: 141 EMPD--RTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDI 198
Query: 146 RQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGET-SIVSWTTIIG 204
R G +H + KLG + + N+++SMYAK ++ AR +FD E V W +I+
Sbjct: 199 RSGSELHSLLVKLGYHSTGF-IVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILS 257
Query: 205 GYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSG-YN 263
Y G E L +M P+ ++ + C L +H+ +LKS ++
Sbjct: 258 SYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHS 317
Query: 264 NEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRL 323
+E + N L++MYT+CG + A R+ + V W S+I GY Q EA+ F +
Sbjct: 318 SELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDM 377
Query: 324 LKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRI 383
+ + +E ++ + ++A L +L G E+ Y++ +G +SN QV +LI M+SKC
Sbjct: 378 IAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLT 437
Query: 384 NKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSA 443
F R+ DKDL W+ +I GYA + +AL LF + + ++ D ++ SIL A
Sbjct: 438 CYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAK-KRMEIDEMILGSILRA 496
Query: 444 CS 445
S
Sbjct: 497 SS 498
>gi|356544234|ref|XP_003540559.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
mitochondrial-like [Glycine max]
Length = 916
Score = 342 bits (876), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 197/607 (32%), Positives = 320/607 (52%), Gaps = 12/607 (1%)
Query: 6 TNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDA 65
+ NG + + M+ G+H + FT+ +L CA + G+++HS ++K F +
Sbjct: 294 SQNGFLSNVMELFLDMISCGIHPDEFTYTSILSTCACFEYLEVGRQLHSAIIKKRFTSNL 353
Query: 66 FVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMW 125
FV LIDMY+K + K + M R +SWN+II + + + A + + M
Sbjct: 354 FVNNALIDMYAKAGALKEAGKHFEHMT--YRDHISWNAIIVGYVQEEVEAGAFSLFRRMI 411
Query: 126 VLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKV 181
+ G+ + S++S C G HC KLGL N + +S++ MY+K G +
Sbjct: 412 LDGIVPDEVSLASILSACGNIKVLEAGQQFHCLSVKLGLETN-LFAGSSLIDMYSKCGDI 470
Query: 182 NEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGC 241
+A + + E S+VS +I GY + N E+ L ++M+ + + P + F +LI C
Sbjct: 471 KDAHKTYSSMPERSVVSVNALIAGYA-LKNTKESINLLHEMQILGLKPSEITFASLIDVC 529
Query: 242 AQVGNLFLALSMHSLLLKSGY-NNEDPLDNLLVSMYTKCGDLELARRVFDAVLE-KSVFL 299
+ L L +H ++K G + L L+ MY L A +F KS+ +
Sbjct: 530 KGSAKVILGLQIHCAIVKRGLLCGSEFLGTSLLGMYMDSQRLADANILFSEFSSLKSIVM 589
Query: 300 WTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIV 359
WT++I G+ Q A+NL++ + ++ P++AT T L ACA L SL G+EI I
Sbjct: 590 WTALISGHIQNECSDVALNLYREMRDNNISPDQATFVTVLQACALLSSLHDGREIHSLIF 649
Query: 360 LNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVP-DKDLAVWSAMINGYAIHGMGDQAL 418
G + + ++L+ M++KCG + + +VFE + KD+ W++MI G+A +G AL
Sbjct: 650 HTGFDLDELTSSALVDMYAKCGDVKSSVQVFEELATKKDVISWNSMIVGFAKNGYAKCAL 709
Query: 419 NLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVD 478
+F +M + PD V + +L+ACSH+G V +G F M + +GIEP ++HY C+VD
Sbjct: 710 KVFDEMTQ-SCITPDDVTFLGVLTACSHAGWVYEGRQIFDVMVNYYGIEPRVDHYACMVD 768
Query: 479 LLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGN 538
LLGR G A + I ++ VE A +WA LL AC H + + G+ AAK L+ L P S+
Sbjct: 769 LLGRWGFLKEAEEFIDKLEVEPNAMIWANLLGACRIHGDEKRGQRAAKKLIELEPQSSSP 828
Query: 539 YILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDI 598
Y+L++N++ ++G W EA + R M + + K PG S + + +FVAGD SH +I
Sbjct: 829 YVLLSNMYAASGNWDEARSLRRTMIKKDIQKIPGCSWIVVGQETNLFVAGDISHSSYDEI 888
Query: 599 RKTLKEL 605
K LK L
Sbjct: 889 SKALKHL 895
Score = 219 bits (558), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 143/530 (26%), Positives = 255/530 (48%), Gaps = 37/530 (6%)
Query: 6 TNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDA 65
T + S E L Y+S + +G + FTF + L ACA + ++ G+ VHS V+K G + +
Sbjct: 23 TKHYSSERVLQFYASFMNSGHSPDQFTFAVTLSACAKLQNLHLGRAVHSCVIKSGLESTS 82
Query: 66 FVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMW 125
F Q LI +Y+KC+ +R + P VSW ++IS + +A L EA+ + +M
Sbjct: 83 FCQGALIHLYAKCNSLTCARTIFASAPFPHLHTVSWTALISGYVQAGLPHEALHIFDKM- 141
Query: 126 VLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEAR 185
+ + +++ L +V++ Y GK+++A
Sbjct: 142 -------------------------------RNSAVPDQVALV-TVLNAYISLGKLDDAC 169
Query: 186 SIFDE--IGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQ 243
+F + I ++V+W +I G+ + EA +QM + V +++ A
Sbjct: 170 QLFQQMPIPIRNVVAWNVMISGHAKTAHYEEALAFFHQMSKHGVKSSRSTLASVLSAIAS 229
Query: 244 VGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSM 303
+ L L +H+ +K G+ + + + L++MY KC + AR+VFDA+ +K++ +W +M
Sbjct: 230 LAALNHGLLVHAHAIKQGFESSIYVASSLINMYGKCQMPDDARQVFDAISQKNMIVWNAM 289
Query: 304 IGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGL 363
+G Y+Q G+ S + LF ++ + P+E T + LS CA L G+++ I+
Sbjct: 290 LGVYSQNGFLSNVMELFLDMISCGIHPDEFTYTSILSTCACFEYLEVGRQLHSAIIKKRF 349
Query: 364 ESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYK 423
SN V +LI M++K G + +A + FE + +D W+A+I GY + A +LF +
Sbjct: 350 TSNLFVNNALIDMYAKAGALKEAGKHFEHMTYRDHISWNAIIVGYVQEEVEAGAFSLFRR 409
Query: 424 MQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRA 483
M ++G+ PD V SILSAC + +++ G F + G+E ++ L+D+ +
Sbjct: 410 MI-LDGIVPDEVSLASILSACGNIKVLEAGQQ-FHCLSVKLGLETNLFAGSSLIDMYSKC 467
Query: 484 GRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNP 533
G A KT MP V A + +K+ + +L L P
Sbjct: 468 GDIKDAHKTYSSMPERSVVSVNALIAGYALKNTKESINLLHEMQILGLKP 517
Score = 194 bits (494), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 112/373 (30%), Positives = 203/373 (54%), Gaps = 7/373 (1%)
Query: 86 KVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSG--- 142
++ +MP+ +R+VV+WN +IS H++ +EA+ +M G++ S ST SV+S
Sbjct: 170 QLFQQMPIPIRNVVAWNVMISGHAKTAHYEEALAFFHQMSKHGVKSSRSTLASVLSAIAS 229
Query: 143 -CSFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTT 201
+ G+ +H K G + I +A+S+++MY K ++AR +FD I + +++ W
Sbjct: 230 LAALNHGLLVHAHAIKQGF-ESSIYVASSLINMYGKCQMPDDARQVFDAISQKNMIVWNA 288
Query: 202 IIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSG 261
++G Y G ++ L M + PD + +++ CA L + +HS ++K
Sbjct: 289 MLGVYSQNGFLSNVMELFLDMISCGIHPDEFTYTSILSTCACFEYLEVGRQLHSAIIKKR 348
Query: 262 YNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFK 321
+ + ++N L+ MY K G L+ A + F+ + + W ++I GY Q + A +LF+
Sbjct: 349 FTSNLFVNNALIDMYAKAGALKEAGKHFEHMTYRDHISWNAIIVGYVQEEVEAGAFSLFR 408
Query: 322 RLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCG 381
R++ + P+E +LA+ LSAC + L G++ V GLE+N +SLI M+SKCG
Sbjct: 409 RMILDGIVPDEVSLASILSACGNIKVLEAGQQFHCLSVKLGLETNLFAGSSLIDMYSKCG 468
Query: 382 RINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSIL 441
I A + + +P++ + +A+I GYA+ +++NL ++MQ + GLKP + + S++
Sbjct: 469 DIKDAHKTYSSMPERSVVSVNALIAGYALKNT-KESINLLHEMQ-ILGLKPSEITFASLI 526
Query: 442 SACSHSGMVDDGL 454
C S V GL
Sbjct: 527 DVCKGSAKVILGL 539
Score = 192 bits (487), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 135/515 (26%), Positives = 245/515 (47%), Gaps = 12/515 (2%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI +EE L+ + M + GV + T VL A A++ ++ G VH+H +K G
Sbjct: 188 MISGHAKTAHYEEALAFFHQMSKHGVKSSRSTLASVLSAIASLAALNHGLLVHAHAIKQG 247
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F+ +V + LI+MY KC +R+V D + ++++ WN+++ +S+ + +
Sbjct: 248 FESSIYVASSLINMYGKCQMPDDARQVFD--AISQKNMIVWNAMLGVYSQNGFLSNVMEL 305
Query: 121 LKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
+M G+ T+ S++S C+ G +H + K +N + + N+++ MYA
Sbjct: 306 FLDMISCGIHPDEFTYTSILSTCACFEYLEVGRQLHSAIIKKRFTSN-LFVNNALIDMYA 364
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K G + EA F+ + +SW II GYV AF L +M + PD V +
Sbjct: 365 KAGALKEAGKHFEHMTYRDHISWNAIIVGYVQEEVEAGAFSLFRRMILDGIVPDEVSLAS 424
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
++ C + L H L +K G + L+ MY+KCGD++ A + + ++ E+S
Sbjct: 425 ILSACGNIKVLEAGQQFHCLSVKLGLETNLFAGSSLIDMYSKCGDIKDAHKTYSSMPERS 484
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEE 356
V ++I GYA L E++NL + ++P+E T A+ + C + G +I
Sbjct: 485 VVSVNALIAGYA-LKNTKESINLLHEMQILGLKPSEITFASLIDVCKGSAKVILGLQIHC 543
Query: 357 YIVLNGLESNRQ-VQTSLIHMFSKCGRINKAKEVFERVPD-KDLAVWSAMINGYAIHGMG 414
IV GL + + TSL+ M+ R+ A +F K + +W+A+I+G+ +
Sbjct: 544 AIVKRGLLCGSEFLGTSLLGMYMDSQRLADANILFSEFSSLKSIVMWTALISGHIQNECS 603
Query: 415 DQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYL 474
D ALNL+ +M+ + PD + ++L AC+ + DG S+ + G +
Sbjct: 604 DVALNLYREMRD-NNISPDQATFVTVLQACALLSSLHDGRE-IHSLIFHTGFDLDELTSS 661
Query: 475 CLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLL 509
LVD+ + G +++ E+ + W ++
Sbjct: 662 ALVDMYAKCGDVKSSVQVFEELATKKDVISWNSMI 696
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 73/302 (24%), Positives = 128/302 (42%), Gaps = 42/302 (13%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+I N + L+ Y M + + TF VL+ACA ++S+ DG+ +HS + G
Sbjct: 593 LISGHIQNECSDVALNLYREMRDNNISPDQATFVTVLQACALLSSLHDGREIHSLIFHTG 652
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F D + L+DMY+KC D SS +V +E+ + + V+SWNS+I ++ A+ V
Sbjct: 653 FDLDELTSSALVDMYAKCGDVKSSVQVFEELATK-KDVISWNSMIVGFAKNGYAKCALKV 711
Query: 121 LKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGK 180
EM + TF+ V++ CS G
Sbjct: 712 FDEMTQSCITPDDVTFLGVLTACSHA--------------------------------GW 739
Query: 181 VNEARSIFDEIG-----ETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFL 235
V E R IFD + E + + ++ G + EA + ++ V P+ +++
Sbjct: 740 VYEGRQIFDVMVNYYGIEPRVDHYACMVDLLGRWGFLKEAEEFID---KLEVEPNAMIWA 796
Query: 236 NLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEK 295
NL+ C G+ L++ + P LL +MY G+ + AR + +++K
Sbjct: 797 NLLGACRIHGDEKRGQRAAKKLIELEPQSSSPY-VLLSNMYAASGNWDEARSLRRTMIKK 855
Query: 296 SV 297
+
Sbjct: 856 DI 857
>gi|357481329|ref|XP_003610950.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512285|gb|AES93908.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 831
Score = 342 bits (876), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 186/584 (31%), Positives = 312/584 (53%), Gaps = 47/584 (8%)
Query: 12 EETLSTYSSMLQTGVHGNSFTFPLVLKACAN------------INSIWDGKRVHSHVLKV 59
+E L + ML+ G+ +S + +L CA +++ GK++H+ +K
Sbjct: 221 KEGLELFRLMLRKGICVDSVSLSTILVICAKGVSFGVCDDSRGLSTNAQGKQIHTLAVKH 280
Query: 60 GFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAIL 119
GF++D + L+DMY+K D S+ V + + SVVSWN +IS + C +++A+
Sbjct: 281 GFERDLHLCNSLLDMYAKTGDMDSAENVFENLDKH--SVVSWNIMISGYGNRCDSEKALE 338
Query: 120 VLKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFG 179
+ M G E T++++++ C K G
Sbjct: 339 CFQRMQCCGYEPDDVTYINMLTAC--------------------------------VKSG 366
Query: 180 KVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLIL 239
V R IFD + S++SW I+ GY + EA L +M+ PD ++
Sbjct: 367 DVKVGRQIFDCMSSPSLISWNAILSGYNQSADHGEAVELFRKMQFQWQNPDRTTLAIILS 426
Query: 240 GCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFL 299
CA++G L +H++ K G+ ++ + + L+++Y+KCG +E+++ VF + E V
Sbjct: 427 SCAELGLLEAGKQVHAVSQKLGFYDDVYVASSLINVYSKCGKMEVSKHVFSKLSELDVVC 486
Query: 300 WTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIV 359
W SMI G++ +A+ FKR+ + P+E + AT S+CA+L SL +G++I I+
Sbjct: 487 WNSMIAGFSINSLEQDALACFKRMRQFGFFPSEFSFATIASSCAKLSSLFQGQQIHAQII 546
Query: 360 LNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALN 419
+G N V +SL+ M+ KCG + A+ F+ +P K++ W+ MI+GYA +G G +A++
Sbjct: 547 KDGYVDNVFVGSSLVEMYCKCGDVGAARYYFDMMPGKNIVTWNEMIHGYAHNGYGLEAVS 606
Query: 420 LFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDL 479
L YK G KPD + + ++L+ACSHS +VD+G+ F SM F + P ++HY C++D
Sbjct: 607 L-YKDMISSGEKPDDITFVAVLTACSHSALVDEGVEIFSSMLQKFEVVPKLDHYTCIIDC 665
Query: 480 LGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNY 539
LGR GRF+ + MP + VW +LS+C H NV L + AA+ L LNP ++ Y
Sbjct: 666 LGRVGRFNEVEVILDTMPYKDDTIVWEVVLSSCRVHANVSLAKRAAEELHRLNPRNSAPY 725
Query: 540 ILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQ 583
+L+AN+++S G W +A R LM D ++ K+PG+S+ E VQ
Sbjct: 726 VLLANMYSSMGRWDDAQVVRDLMSDNQIHKDPGYSRSEFKYDVQ 769
Score = 152 bits (383), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 111/445 (24%), Positives = 206/445 (46%), Gaps = 58/445 (13%)
Query: 129 LELSASTFVSVVSGCSFRQGIS----MHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEA 184
+E+ + ++++ C + +S +H +++ L ++ L N ++ +Y+K ++ A
Sbjct: 1 MEVKSLNLINLLQSCITNKSLSSAKIIHARIFRFTLFSDTF-LCNHLIDLYSKCNQITSA 59
Query: 185 RSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRM------------------- 225
+FD+I +I S+ I+ + N+ A L QM
Sbjct: 60 HHVFDKIPHKNIFSYNAILSAFCKSNNLQYACRLFLQMPERNTVSLNTIITTMVKNGYER 119
Query: 226 -------------SVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLL 272
SV P + F + C + ++ H L+LK G+++ + N L
Sbjct: 120 QALDTYDLMMVYESVKPSHITFATVFSACGGLKDVNCGRRNHGLVLKVGFDSNIYVSNAL 179
Query: 273 VSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNE 332
+ MYTKCG E A RVF+ ++E + +T+M+GG +Q E + LF+ +L+ + +
Sbjct: 180 LCMYTKCGLNEDAFRVFEGIVEPNEVTFTTMMGGLSQTNQVKEGLELFRLMLRKGICVDS 239
Query: 333 ATLATTLSACAE------------LGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKC 380
+L+T L CA+ L + ++GK+I V +G E + + SL+ M++K
Sbjct: 240 VSLSTILVICAKGVSFGVCDDSRGLSTNAQGKQIHTLAVKHGFERDLHLCNSLLDMYAKT 299
Query: 381 GRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSI 440
G ++ A+ VFE + + W+ MI+GY ++AL F +MQ G +PD V Y ++
Sbjct: 300 GDMDSAENVFENLDKHSVVSWNIMISGYGNRCDSEKALECFQRMQCC-GYEPDDVTYINM 358
Query: 441 LSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEV 500
L+AC SG V G F M S PS+ + ++ ++ A++ +M +
Sbjct: 359 LTACVKSGDVKVGRQIFDCMSS-----PSLISWNAILSGYNQSADHGEAVELFRKMQFQW 413
Query: 501 Q---AQVWAPLLSACMKHHNVELGE 522
Q A +LS+C + +E G+
Sbjct: 414 QNPDRTTLAIILSSCAELGLLEAGK 438
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 126/522 (24%), Positives = 225/522 (43%), Gaps = 85/522 (16%)
Query: 36 VLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMP--- 92
+L++C S+ K +H+ + + D F+ LID+YSKC+ S+ V D++P
Sbjct: 11 LLQSCITNKSLSSAKIIHARIFRFTLFSDTFLCNHLIDLYSKCNQITSAHHVFDKIPHKN 70
Query: 93 --------------------VRL------RSVVSWNSIISAHSRACLNDEAILVLKEMWV 126
RL R+ VS N+II+ + +A+ M V
Sbjct: 71 IFSYNAILSAFCKSNNLQYACRLFLQMPERNTVSLNTIITTMVKNGYERQALDTYDLMMV 130
Query: 127 L-GLELSASTFVSVVSGCSFRQGISM----HCCVYKLGLLNNEIPLANSVMSMYAKFGKV 181
++ S TF +V S C + ++ H V K+G +N I ++N+++ MY K G
Sbjct: 131 YESVKPSHITFATVFSACGGLKDVNCGRRNHGLVLKVGFDSN-IYVSNALLCMYTKCGLN 189
Query: 182 NEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGC 241
+A +F+ I E + V++TT++GG V E L M R + D V +++ C
Sbjct: 190 EDAFRVFEGIVEPNEVTFTTMMGGLSQTNQVKEGLELFRLMLRKGICVDSVSLSTILVIC 249
Query: 242 AQ-----VGNLFLALS-------MHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVF 289
A+ V + LS +H+L +K G+ + L N L+ MY K GD++ A VF
Sbjct: 250 AKGVSFGVCDDSRGLSTNAQGKQIHTLAVKHGFERDLHLCNSLLDMYAKTGDMDSAENVF 309
Query: 290 DAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLS 349
+ + + SV W MI GY +A+ F+R+ P++ T L+AC + G +
Sbjct: 310 ENLDKHSVVSWNIMISGYGNRCDSEKALECFQRMQCCGYEPDDVTYINMLTACVKSGDVK 369
Query: 350 KGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYA 409
G++I F+ + L W+A+++GY
Sbjct: 370 VGRQI-----------------------------------FDCMSSPSLISWNAILSGYN 394
Query: 410 IHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPS 469
+A+ LF KMQ + PD ILS+C+ G+++ G ++ G
Sbjct: 395 QSADHGEAVELFRKMQ-FQWQNPDRTTLAIILSSCAELGLLEAGKQ-VHAVSQKLGFYDD 452
Query: 470 IEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSA 511
+ L+++ + G+ +++ K + E+ W +++
Sbjct: 453 VYVASSLINVYSKCGKMEVS-KHVFSKLSELDVVCWNSMIAG 493
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 71/297 (23%), Positives = 137/297 (46%), Gaps = 33/297 (11%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI + N ++ L+ + M Q G + F+F + +CA ++S++ G+++H+ ++K G
Sbjct: 490 MIAGFSINSLEQDALACFKRMRQFGFFPSEFSFATIASSCAKLSSLFQGQQIHAQIIKDG 549
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+ + FV + L++MY KC D ++R D MP +++V+WN +I ++ EA+ +
Sbjct: 550 YVDNVFVGSSLVEMYCKCGDVGAARYYFDMMPG--KNIVTWNEMIHGYAHNGYGLEAVSL 607
Query: 121 LKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGK 180
K+M G + TFV+V++ CS L++ + + +S++ + K
Sbjct: 608 YKDMISSGEKPDDITFVAVLTACSHS------------ALVDEGVEIFSSMLQKFEVVPK 655
Query: 181 VNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILG 240
++ I D +G VG NE + + M D +V+ ++
Sbjct: 656 LDHYTCIIDCLGR---------------VGRFNEVEVI---LDTMPYKDDTIVWEVVLSS 697
Query: 241 CAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSV 297
C N+ LA L + N P LL +MY+ G + A+ V D + + +
Sbjct: 698 CRVHANVSLAKRAAEELHRLNPRNSAPY-VLLANMYSSMGRWDDAQVVRDLMSDNQI 753
>gi|115456537|ref|NP_001051869.1| Os03g0844000 [Oryza sativa Japonica Group]
gi|41469627|gb|AAS07350.1| putative pentatricopeptide repeat domain contianing protein [Oryza
sativa Japonica Group]
gi|113550340|dbj|BAF13783.1| Os03g0844000 [Oryza sativa Japonica Group]
gi|215686748|dbj|BAG89598.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 702
Score = 342 bits (876), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 189/602 (31%), Positives = 334/602 (55%), Gaps = 9/602 (1%)
Query: 6 TNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDA 65
T NG E L+ ++ M+++GV N F L ACA++ ++ G++VHS ++ GF DA
Sbjct: 90 TRNGRPEAALAMFADMVESGVAPNDFACNAALVACADLGALRAGEQVHSLAVRAGFAGDA 149
Query: 66 FVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMW 125
++ + LI+MYS+C ++++V D M VV + S+ISA R + A L +M
Sbjct: 150 WIGSCLIEMYSRCGSLPAAKEVFDRMDSP--DVVGYTSLISAFCRNGEFELAAEALIQML 207
Query: 126 VLGLELSASTFVSVVSGCSFRQGISMHC-CVYKLGLLNNEIPLANSVMSMYAKFGKVNEA 184
GL+ + T ++++ C G +H + K+GL + + + +++ Y++ G+ A
Sbjct: 208 KQGLKPNEHTMTTILTACPRVLGQQIHGYLIKKIGLRSQSVYSSTALIDFYSRNGEFKLA 267
Query: 185 RSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILG-CAQ 243
+++FD + ++VSW +++ Y+ G + EA + M V P+ L+++LG C
Sbjct: 268 KAVFDSLHCKNVVSWCSMMQLYIRDGRLEEALQVFGDMISEGVDPNEFA-LSIVLGACGS 326
Query: 244 VGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSM 303
+G L +H +K + + N L+SMY + G +E + + + + WT+
Sbjct: 327 IG---LGRQLHCSAIKHDLITDIRVSNALLSMYGRTGLVEELEAMLNKIENPDLVSWTTA 383
Query: 304 IGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGL 363
I Q G+ +A+ L ++ PN ++ LS+CA++ SL +G + + G
Sbjct: 384 ISANFQNGFGEKAIALLCQMHSEGFTPNGYAFSSVLSSCADVASLDQGMQFHCLALKLGC 443
Query: 364 ESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYK 423
+S +LI+M+SKCG++ A+ F+ + D+ W+++I+G+A HG ++AL +F K
Sbjct: 444 DSEICTGNALINMYSKCGQMGSARLAFDVMHTHDVTSWNSLIHGHAQHGDANKALEVFSK 503
Query: 424 MQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRA 483
M+ G+KPD + +L C+HSGMV++G FF+ M + P+ HY C++D+LGR
Sbjct: 504 MRS-NGIKPDDSTFLGVLMGCNHSGMVEEGELFFRLMIDQYSFTPAPSHYACMIDMLGRN 562
Query: 484 GRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMA 543
GRFD AL+ I++MP E A +W LL++C H N+++G+ AA L+ L+ + +Y+LM+
Sbjct: 563 GRFDEALRMINDMPFEPDALIWKTLLASCKLHRNLDIGKLAADRLMELSDRDSASYVLMS 622
Query: 544 NLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLK 603
N++ G W++A R MD+ + K+ G S +EI+ V F + D SH S I + L
Sbjct: 623 NIYAMHGEWEDARKVRRRMDETGVKKDAGCSWIEINNEVHTFASRDMSHPNSDSIYQMLG 682
Query: 604 EL 605
EL
Sbjct: 683 EL 684
Score = 135 bits (339), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 80/275 (29%), Positives = 141/275 (51%), Gaps = 7/275 (2%)
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K G++ +A +FD + ++V+WT+++ GY G A + M V P+
Sbjct: 60 KSGRLADALDLFDRMPRKNVVAWTSVMSGYTRNGRPEAALAMFADMVESGVAPNDFACNA 119
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
++ CA +G L +HSL +++G+ + + + L+ MY++CG L A+ VFD +
Sbjct: 120 ALVACADLGALRAGEQVHSLAVRAGFAGDAWIGSCLIEMYSRCGSLPAAKEVFDRMDSPD 179
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEE 356
V +TS+I + + G A ++LK ++PNE T+ T L+AC + G++I
Sbjct: 180 VVGYTSLISAFCRNGEFELAAEALIQMLKQGLKPNEHTMTTILTACPRV----LGQQIHG 235
Query: 357 YIVLN-GLESNR-QVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMG 414
Y++ GL S T+LI +S+ G AK VF+ + K++ W +M+ Y G
Sbjct: 236 YLIKKIGLRSQSVYSSTALIDFYSRNGEFKLAKAVFDSLHCKNVVSWCSMMQLYIRDGRL 295
Query: 415 DQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGM 449
++AL +F M EG+ P+ + +L AC G+
Sbjct: 296 EEALQVFGDMIS-EGVDPNEFALSIVLGACGSIGL 329
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 86/315 (27%), Positives = 150/315 (47%), Gaps = 20/315 (6%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
M++ +G EE L + M+ GV N F +VL AC SI G+++H +K
Sbjct: 285 MMQLYIRDGRLEEALQVFGDMISEGVDPNEFALSIVLGACG---SIGLGRQLHCSAIKHD 341
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
D V L+ MY + +L++ + +VSW + ISA+ + ++AI +
Sbjct: 342 LITDIRVSNALLSMYGRTGLVEELEAMLNK--IENPDLVSWTTAISANFQNGFGEKAIAL 399
Query: 121 LKEMWVLGLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
L +M G + F SV+S C S QG+ HC KLG ++EI N++++MY+
Sbjct: 400 LCQMHSEGFTPNGYAFSSVLSSCADVASLDQGMQFHCLALKLG-CDSEICTGNALINMYS 458
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K G++ AR FD + + SW ++I G+ G+ N+A + ++MR + PD FL
Sbjct: 459 KCGQMGSARLAFDVMHTHDVTSWNSLIHGHAQHGDANKALEVFSKMRSNGIKPDDSTFLG 518
Query: 237 LILGC-----AQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVF-D 290
+++GC + G LF L ++ + + ++ M + G + A R+ D
Sbjct: 519 VLMGCNHSGMVEEGELFFRL----MIDQYSFTPAPSHYACMIDMLGRNGRFDEALRMIND 574
Query: 291 AVLEKSVFLWTSMIG 305
E +W +++
Sbjct: 575 MPFEPDALIWKTLLA 589
>gi|413943926|gb|AFW76575.1| hypothetical protein ZEAMMB73_444227 [Zea mays]
Length = 869
Score = 341 bits (875), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 205/641 (31%), Positives = 327/641 (51%), Gaps = 34/641 (5%)
Query: 14 TLSTYSSMLQTGVHGNSFTFPLVLKACANI-NSIWDGKRVHSHVLKVGF--QQDAFVQTG 70
L ML G +SFT VL AC+++ + G+ H+ LK GF + F
Sbjct: 146 ALDALRDMLLEGHPLSSFTLVSVLLACSHLAEDLRLGREAHAFALKNGFLDGDERFAFNA 205
Query: 71 LIDMYSKCSDFVSSRKVL----DEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWV 126
L+ MY++ V ++L D VV+WN+++S ++ EAI V+ +M
Sbjct: 206 LLSMYARLG-LVDDAQMLFGSVDTTDSPGGGVVTWNTMVSLLVQSGRCGEAIEVIYDMVA 264
Query: 127 LGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVN 182
G+ TF S + CS G MH V K L +A++++ MYA +V
Sbjct: 265 RGVRPDGITFASALPACSQLEMLSLGREMHAYVLKDSDLAANSFVASALVDMYASHERVG 324
Query: 183 EARSIFDEI--GETSIVSWTTIIGGYVNVGNVNEAFGLCNQMR-RMSVTPDLVVFLNLIL 239
AR +FD + G + W ++ GY G EA L +M V P ++
Sbjct: 325 VARRVFDMVPGGHRQLGLWNAMVCGYAQAGMDEEALELFARMEAEAGVVPSETTIAGVLP 384
Query: 240 GCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFL 299
CA+ ++H +LK G + + N L+ +Y + GD+E AR +F A+ + V
Sbjct: 385 ACARSETFAGKEAVHGYVLKRGMADNPFVQNALMDLYARLGDMEAARWIFAAIEPRDVVS 444
Query: 300 WTSMIGGYAQLGYPSEAVNLFKRLLKT------------------SVRPNEATLATTLSA 341
W ++I G G+ +A L + + + V PN TL T L
Sbjct: 445 WNTLITGCVVQGHIHDAFQLVREMQQQGRFTDATTEDGIAGTDEEPVVPNNVTLMTLLPG 504
Query: 342 CAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVW 401
CA L + +KGKEI Y + + L+S+ V ++L+ M++KCG + ++ VF+R+P +++ W
Sbjct: 505 CAMLAAPAKGKEIHGYAMRHALDSDIAVGSALVDMYAKCGCLALSRAVFDRLPKRNVITW 564
Query: 402 SAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQ 461
+ +I Y +HG+GD+A+ LF +M KP+ V + + L+ACSHSGMVD G+ F SM+
Sbjct: 565 NVLIMAYGMHGLGDEAIALFDRMVMSNEAKPNEVTFIAALAACSHSGMVDRGMELFHSMK 624
Query: 462 SNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEM-PVEVQAQVWAPLLSACMKHHNVEL 520
N G++P+ + + C VD+LGRAGR D A I M P E Q W+ L AC H NV L
Sbjct: 625 RNHGVQPTPDLHACAVDILGRAGRLDEAYSIITSMEPGEQQVSAWSSFLGACRLHRNVPL 684
Query: 521 GEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDG 580
GE AA+ L L P +Y+L+ N++++AG+W++++ R M R ++KEPG S +E+DG
Sbjct: 685 GEIAAERLFQLEPDEASHYVLLCNIYSAAGLWEKSSEVRNRMRQRGVSKEPGCSWIELDG 744
Query: 581 SVQVFVAGDRSHHLSVDIRKTLKELHIKLLEAGYIAEADIV 621
+ F+AG+ +H S + + L ++ GY + V
Sbjct: 745 VIHRFMAGESAHPESTLVHAHMDALWERMRNQGYTPDTSSV 785
Score = 189 bits (479), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 118/460 (25%), Positives = 225/460 (48%), Gaps = 32/460 (6%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLK-V 59
M+ +G E + M+ GV + TF L AC+ + + G+ +H++VLK
Sbjct: 242 MVSLLVQSGRCGEAIEVIYDMVARGVRPDGITFASALPACSQLEMLSLGREMHAYVLKDS 301
Query: 60 GFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAIL 119
++FV + L+DMY+ +R+V D +P R + WN+++ +++A +++EA+
Sbjct: 302 DLAANSFVASALVDMYASHERVGVARRVFDMVPGGHRQLGLWNAMVCGYAQAGMDEEALE 361
Query: 120 VLKEMWV-LGLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSM 174
+ M G+ S +T V+ C +F ++H V K G+ +N + N++M +
Sbjct: 362 LFARMEAEAGVVPSETTIAGVLPACARSETFAGKEAVHGYVLKRGMADNPF-VQNALMDL 420
Query: 175 YAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRM--------- 225
YA+ G + AR IF I +VSW T+I G V G++++AF L +M++
Sbjct: 421 YARLGDMEAARWIFAAIEPRDVVSWNTLITGCVVQGHIHDAFQLVREMQQQGRFTDATTE 480
Query: 226 ---------SVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMY 276
V P+ V + L+ GCA + +H ++ +++ + + LV MY
Sbjct: 481 DGIAGTDEEPVVPNNVTLMTLLPGCAMLAAPAKGKEIHGYAMRHALDSDIAVGSALVDMY 540
Query: 277 TKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRL-LKTSVRPNEATL 335
KCG L L+R VFD + +++V W +I Y G EA+ LF R+ + +PNE T
Sbjct: 541 AKCGCLALSRAVFDRLPKRNVITWNVLIMAYGMHGLGDEAIALFDRMVMSNEAKPNEVTF 600
Query: 336 ATTLSACAELGSLSKGKEIEEYIVLN-GLESNRQVQTSLIHMFSKCGRINKAKEVFERVP 394
L+AC+ G + +G E+ + N G++ + + + + GR+++A + +
Sbjct: 601 IAALAACSHSGMVDRGMELFHSMKRNHGVQPTPDLHACAVDILGRAGRLDEAYSIITSME 660
Query: 395 --DKDLAVWSAMINGYAIH---GMGDQALNLFYKMQHVEG 429
++ ++ WS+ + +H +G+ A ++++ E
Sbjct: 661 PGEQQVSAWSSFLGACRLHRNVPLGEIAAERLFQLEPDEA 700
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 129/434 (29%), Positives = 213/434 (49%), Gaps = 30/434 (6%)
Query: 29 NSFTFPLVLKACANINSIWDGKRVHSHVLKV----GFQQDAFVQTGLIDMYSKCSDFVSS 84
+ F P K+ A + S+ + +H L+ GF V L+ Y++C D ++
Sbjct: 58 DHFALPPAAKSAAALRSLIAVRSIHGAALRRDLLHGFTPA--VANALLTAYARCGDLTAA 115
Query: 85 RKVLDEMPVRLRSVVSWNSIISAHSRACLNDE---AILVLKEMWVLGLELSASTFVSVVS 141
+ + MP R V++NS+I+A CL A+ L++M + G LS+ T VSV+
Sbjct: 116 LALFNAMPSR--DAVTFNSLIAA---LCLFRRWLPALDALRDMLLEGHPLSSFTLVSVLL 170
Query: 142 GCS-----FRQGISMHCCVYKLGLLNNEIPLA-NSVMSMYAKFGKVNEARSIFDEIGETS 195
CS R G H K G L+ + A N+++SMYA+ G V++A+ +F + T
Sbjct: 171 ACSHLAEDLRLGREAHAFALKNGFLDGDERFAFNALLSMYARLGLVDDAQMLFGSVDTTD 230
Query: 196 -----IVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLA 250
+V+W T++ V G EA + M V PD + F + + C+Q+ L L
Sbjct: 231 SPGGGVVTWNTMVSLLVQSGRCGEAIEVIYDMVARGVRPDGITFASALPACSQLEMLSLG 290
Query: 251 LSMHSLLLK-SGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVL--EKSVFLWTSMIGGY 307
MH+ +LK S + + LV MY + +ARRVFD V + + LW +M+ GY
Sbjct: 291 REMHAYVLKDSDLAANSFVASALVDMYASHERVGVARRVFDMVPGGHRQLGLWNAMVCGY 350
Query: 308 AQLGYPSEAVNLFKRL-LKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESN 366
AQ G EA+ LF R+ + V P+E T+A L ACA + + + + Y++ G+ N
Sbjct: 351 AQAGMDEEALELFARMEAEAGVVPSETTIAGVLPACARSETFAGKEAVHGYVLKRGMADN 410
Query: 367 RQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQH 426
VQ +L+ ++++ G + A+ +F + +D+ W+ +I G + G A L +MQ
Sbjct: 411 PFVQNALMDLYARLGDMEAARWIFAAIEPRDVVSWNTLITGCVVQGHIHDAFQLVREMQQ 470
Query: 427 VEGLKPDAVVYTSI 440
+G DA I
Sbjct: 471 -QGRFTDATTEDGI 483
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 86/310 (27%), Positives = 157/310 (50%), Gaps = 12/310 (3%)
Query: 150 SMHCCVYKLGLLNNEIP-LANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVN 208
S+H + LL+ P +AN++++ YA+ G + A ++F+ + V++ ++I
Sbjct: 80 SIHGAALRRDLLHGFTPAVANALLTAYARCGDLTAALALFNAMPSRDAVTFNSLIAALCL 139
Query: 209 VGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVG-NLFLALSMHSLLLKSGY--NNE 265
A M ++++L C+ + +L L H+ LK+G+ +E
Sbjct: 140 FRRWLPALDALRDMLLEGHPLSSFTLVSVLLACSHLAEDLRLGREAHAFALKNGFLDGDE 199
Query: 266 DPLDNLLVSMYTKCGDLELARRVFDAVLEKS-----VFLWTSMIGGYAQLGYPSEAVNLF 320
N L+SMY + G ++ A+ +F +V V W +M+ Q G EA+ +
Sbjct: 200 RFAFNALLSMYARLGLVDDAQMLFGSVDTTDSPGGGVVTWNTMVSLLVQSGRCGEAIEVI 259
Query: 321 KRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNG-LESNRQVQTSLIHMFSK 379
++ VRP+ T A+ L AC++L LS G+E+ Y++ + L +N V ++L+ M++
Sbjct: 260 YDMVARGVRPDGITFASALPACSQLEMLSLGREMHAYVLKDSDLAANSFVASALVDMYAS 319
Query: 380 CGRINKAKEVFERVP--DKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVY 437
R+ A+ VF+ VP + L +W+AM+ GYA GM ++AL LF +M+ G+ P
Sbjct: 320 HERVGVARRVFDMVPGGHRQLGLWNAMVCGYAQAGMDEEALELFARMEAEAGVVPSETTI 379
Query: 438 TSILSACSHS 447
+L AC+ S
Sbjct: 380 AGVLPACARS 389
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/236 (23%), Positives = 103/236 (43%), Gaps = 9/236 (3%)
Query: 270 NLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVR 329
N L++ Y +CGDL A +F+A+ + + S+I A++ + +L
Sbjct: 100 NALLTAYARCGDLTAALALFNAMPSRDAVTFNSLIAALCLFRRWLPALDALRDMLLEGHP 159
Query: 330 PNEATLATTLSACAELG-SLSKGKEIEEYIVLNGL--ESNRQVQTSLIHMFSKCGRINKA 386
+ TL + L AC+ L L G+E + + NG R +L+ M+++ G ++ A
Sbjct: 160 LSSFTLVSVLLACSHLAEDLRLGREAHAFALKNGFLDGDERFAFNALLSMYARLGLVDDA 219
Query: 387 KEVFERV-----PDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSIL 441
+ +F V P + W+ M++ G +A+ + Y M G++PD + + S L
Sbjct: 220 QMLFGSVDTTDSPGGGVVTWNTMVSLLVQSGRCGEAIEVIYDMV-ARGVRPDGITFASAL 278
Query: 442 SACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMP 497
ACS M+ G + + + + LVD+ R +A + +P
Sbjct: 279 PACSQLEMLSLGREMHAYVLKDSDLAANSFVASALVDMYASHERVGVARRVFDMVP 334
>gi|449469198|ref|XP_004152308.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g37170-like [Cucumis sativus]
gi|449484855|ref|XP_004156999.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g37170-like [Cucumis sativus]
Length = 724
Score = 341 bits (875), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 182/529 (34%), Positives = 292/529 (55%), Gaps = 47/529 (8%)
Query: 133 ASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIF 188
AS +++++ C + ++G +H + G + + ++N ++ MYAK G + +A +F
Sbjct: 119 ASIYLTLLKFCLKQRALKEGKQVHAHIKTSGSIG--LYISNRLLDMYAKCGSLVDAEKVF 176
Query: 189 DEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQ----- 243
DE+ + SW +I GYV GN +A L ++M D + +I GC Q
Sbjct: 177 DEMVHRDLCSWNIMISGYVKGGNFEKARNLFDKM----PNRDNFSWTAIISGCVQHNRPE 232
Query: 244 -------------------------------VGNLFLALSMHSLLLKSGYNNEDPLDNLL 272
+ +L + +H +++ G ++++ + L
Sbjct: 233 EALELYRLMQKHDYSKSNKCTISSALAASAAIPSLHMGKKIHGHIMRMGLDSDEVVWCSL 292
Query: 273 VSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNE 332
+ MY KCG +E AR +FD + E+ V WT+MI Y + G E LF+ L+ +++ PN+
Sbjct: 293 LDMYGKCGSIEEARYIFDKMEERDVVSWTTMIHTYLKNGRREEGFALFRHLMNSNIMPND 352
Query: 333 ATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFER 392
T A L+ACA+L + GK+I Y+V G +S ++L+HM+SKCG I AK VFE
Sbjct: 353 FTFAGVLNACADLAAEDLGKQIHAYMVRVGFDSFSSAASALVHMYSKCGDIENAKSVFEI 412
Query: 393 VPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDD 452
+P DL W++++ GYA HG D+AL+ F+++ G KPD + + +LSAC+H+G+VD
Sbjct: 413 LPQPDLFSWTSLLVGYAQHGQHDKALH-FFELLLKSGTKPDGIAFIGVLSACAHAGLVDK 471
Query: 453 GLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSAC 512
GL +F S++ G+ +I+HY C++DLL RAG+F A I+EMP++ +WA LL C
Sbjct: 472 GLEYFHSIKEKHGLTRTIDHYACIIDLLARAGQFTEAESIINEMPIKPDKYIWAALLGGC 531
Query: 513 MKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPG 572
H N+EL + AAK+L + P + Y+ +AN++ SAGM E A R MD R + K+PG
Sbjct: 532 RIHGNLELAKRAAKSLFEIEPENPATYVTLANIYASAGMRAEEANIRETMDSRGIVKKPG 591
Query: 573 WSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKELHIKLLEAGYIAEADIV 621
S +EI V VF GD SH S +I + L EL ++ E GY+ + + V
Sbjct: 592 MSWIEIRREVHVFSVGDNSHPKSKEILEYLSELSKRMKEVGYVPDTNFV 640
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 127/469 (27%), Positives = 226/469 (48%), Gaps = 52/469 (11%)
Query: 36 VLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRL 95
+LK C ++ +GK+VH+H+ K ++ L+DMY+KC V + KV DEM
Sbjct: 125 LLKFCLKQRALKEGKQVHAHI-KTSGSIGLYISNRLLDMYAKCGSLVDAEKVFDEMV--H 181
Query: 96 RSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGC------------ 143
R + SWN +IS + + ++A + +M ++ +++SGC
Sbjct: 182 RDLCSWNIMISGYVKGGNFEKARNLFDKM----PNRDNFSWTAIISGCVQHNRPEEALEL 237
Query: 144 ----------------------------SFRQGISMHCCVYKLGLLNNEIPLANSVMSMY 175
S G +H + ++GL ++E+ S++ MY
Sbjct: 238 YRLMQKHDYSKSNKCTISSALAASAAIPSLHMGKKIHGHIMRMGLDSDEVVWC-SLLDMY 296
Query: 176 AKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFL 235
K G + EAR IFD++ E +VSWTT+I Y+ G E F L + ++ P+ F
Sbjct: 297 GKCGSIEEARYIFDKMEERDVVSWTTMIHTYLKNGRREEGFALFRHLMNSNIMPNDFTFA 356
Query: 236 NLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEK 295
++ CA + L +H+ +++ G+++ + LV MY+KCGD+E A+ VF+ + +
Sbjct: 357 GVLNACADLAAEDLGKQIHAYMVRVGFDSFSSAASALVHMYSKCGDIENAKSVFEILPQP 416
Query: 296 SVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIE 355
+F WTS++ GYAQ G +A++ F+ LLK+ +P+ LSACA G + KG E
Sbjct: 417 DLFSWTSLLVGYAQHGQHDKALHFFELLLKSGTKPDGIAFIGVLSACAHAGLVDKGLEYF 476
Query: 356 EYIV-LNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDK-DLAVWSAMINGYAIHGM 413
I +GL +I + ++ G+ +A+ + +P K D +W+A++ G IHG
Sbjct: 477 HSIKEKHGLTRTIDHYACIIDLLARAGQFTEAESIINEMPIKPDKYIWAALLGGCRIHGN 536
Query: 414 GDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQS 462
+ A + +E P Y ++ + + +GM + + ++M S
Sbjct: 537 LELAKRAAKSLFEIEPENP--ATYVTLANIYASAGMRAEEANIRETMDS 583
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 88/362 (24%), Positives = 166/362 (45%), Gaps = 17/362 (4%)
Query: 12 EETLSTYSSMLQTGV-HGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTG 70
EE L Y M + N T L A A I S+ GK++H H++++G D V
Sbjct: 232 EEALELYRLMQKHDYSKSNKCTISSALAASAAIPSLHMGKKIHGHIMRMGLDSDEVVWCS 291
Query: 71 LIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLE 130
L+DMY KC +R + D+M R VVSW ++I + + +E + + + +
Sbjct: 292 LLDMYGKCGSIEEARYIFDKM--EERDVVSWTTMIHTYLKNGRREEGFALFRHLMNSNIM 349
Query: 131 LSASTFVSVVSGCSFRQ----GISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARS 186
+ TF V++ C+ G +H + ++G ++ A++++ MY+K G + A+S
Sbjct: 350 PNDFTFAGVLNACADLAAEDLGKQIHAYMVRVGF-DSFSSAASALVHMYSKCGDIENAKS 408
Query: 187 IFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGN 246
+F+ + + + SWT+++ GY G ++A + + PD + F+ ++ CA G
Sbjct: 409 VFEILPQPDLFSWTSLLVGYAQHGQHDKALHFFELLLKSGTKPDGIAFIGVLSACAHAGL 468
Query: 247 LFLALS-MHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAV-LEKSVFLWTSMI 304
+ L HS+ K G ++ + + G A + + + ++ ++W +++
Sbjct: 469 VDKGLEYFHSIKEKHGLTRTIDHYACIIDLLARAGQFTEAESIINEMPIKPDKYIWAALL 528
Query: 305 GGYAQLGYPSEAVNLFKRLLKT--SVRP-NEATLATTLSACAELGSLSKGKEIEEYIVLN 361
GG G + L KR K+ + P N AT T + A G ++ I E +
Sbjct: 529 GGCRIHG----NLELAKRAAKSLFEIEPENPATYVTLANIYASAGMRAEEANIRETMDSR 584
Query: 362 GL 363
G+
Sbjct: 585 GI 586
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 110/220 (50%), Gaps = 7/220 (3%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI NG EE + + ++ + + N FTF VL ACA++ + GK++H+++++VG
Sbjct: 323 MIHTYLKNGRREEGFALFRHLMNSNIMPNDFTFAGVLNACADLAAEDLGKQIHAYMVRVG 382
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F + + L+ MYSKC D +++ V + +P + SW S++ +++ +D+A+
Sbjct: 383 FDSFSSAASALVHMYSKCGDIENAKSVFEILP--QPDLFSWTSLLVGYAQHGQHDKALHF 440
Query: 121 LKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
+ + G + F+ V+S C+ +G+ + + L I ++ + A
Sbjct: 441 FELLLKSGTKPDGIAFIGVLSACAHAGLVDKGLEYFHSIKEKHGLTRTIDHYACIIDLLA 500
Query: 177 KFGKVNEARSIFDEIG-ETSIVSWTTIIGGYVNVGNVNEA 215
+ G+ EA SI +E+ + W ++GG GN+ A
Sbjct: 501 RAGQFTEAESIINEMPIKPDKYIWAALLGGCRIHGNLELA 540
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 115/277 (41%), Gaps = 54/277 (19%)
Query: 315 EAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLI 374
EAV L R+ K P + T L C + +L +GK++ +I +G + L+
Sbjct: 106 EAVQLLYRIEK----PYASIYLTLLKFCLKQRALKEGKQVHAHIKTSG-SIGLYISNRLL 160
Query: 375 HMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDA 434
M++KCG + A++VF+ + +DL W+ MI+GY G ++A NLF KM + D
Sbjct: 161 DMYAKCGSLVDAEKVFDEMVHRDLCSWNIMISGYVKGGNFEKARNLFDKMPN-----RDN 215
Query: 435 VVYTSILSACSHSGMVDDGLSFFKSMQSN------------------------------- 463
+T+I+S C ++ L ++ MQ +
Sbjct: 216 FSWTAIISGCVQHNRPEEALELYRLMQKHDYSKSNKCTISSALAASAAIPSLHMGKKIHG 275
Query: 464 ----FGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVE 519
G++ + L+D+ G+ G + A +M E W ++ +K+ E
Sbjct: 276 HIMRMGLDSDEVVWCSLLDMYGKCGSIEEARYIFDKME-ERDVVSWTTMIHTYLKNGRRE 334
Query: 520 LGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAA 556
G ++L+ N +M N FT AG+ A
Sbjct: 335 EGFALFRHLMNSN--------IMPNDFTFAGVLNACA 363
>gi|357474955|ref|XP_003607763.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355508818|gb|AES89960.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 871
Score = 341 bits (875), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 206/558 (36%), Positives = 305/558 (54%), Gaps = 17/558 (3%)
Query: 33 FPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMP 92
F ++LK + + I ++H ++LK D+FV T L+D YSKC +RKV DE+P
Sbjct: 138 FSILLKTASQLRDIVLTTKLHCNILKSN-AADSFVLTSLVDAYSKCGKLRDARKVFDEIP 196
Query: 93 VRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCS----FRQG 148
R SVVSW S+I A+ + +E +++ M L+ + T S+V+ C+ QG
Sbjct: 197 DR--SVVSWTSMIVAYVQNECAEEGLMLFNRMREGFLDGNVFTVGSLVTACTKLGCLHQG 254
Query: 149 ISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEI------GETSIVSWTTI 202
+H V K G+ N LA S+++MY K G + +ARS+FDE G +V WT +
Sbjct: 255 KWVHGYVIKNGIEINSY-LATSLLNMYVKCGDIGDARSVFDEFSVSTCGGGDDLVFWTAM 313
Query: 203 IGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGY 262
I GY G A L + + P+ V +L+ CAQ+ N+ + +H L++K G
Sbjct: 314 IVGYTQRGYPQAALELFTDKKWYRILPNSVTLASLLSACAQLENIVMGKLLHVLVVKYGL 373
Query: 263 NNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKR 322
++ L N LV MY KCG + A VF ++K V W S+I GYAQ G EA++LF R
Sbjct: 374 DDTS-LRNSLVDMYAKCGLIPDAHYVFATTVDKDVVSWNSVISGYAQSGSAYEALDLFNR 432
Query: 323 LLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGL-ESNRQVQTSLIHMFSKCG 381
+ S P+ T+ LSACA +G+ G + + + GL S+ V T+L++ ++KCG
Sbjct: 433 MRMESFLPDAVTVVGVLSACASVGAHQIGLSLHGFALKYGLVSSSIYVGTALLNFYAKCG 492
Query: 382 RINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSIL 441
A+ VF+ + +K+ W+AMI G + G G +L LF M E L P+ VV+T++L
Sbjct: 493 DATSARMVFDGMGEKNAVTWAAMIGGCGMQGDGVGSLALFRDMLK-EELVPNEVVFTTLL 551
Query: 442 SACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQ 501
+ACSHSGMV++GL F M PS++HY C+VDLL RAG AL I +MPV+
Sbjct: 552 AACSHSGMVEEGLMIFDFMCKELNFVPSMKHYACMVDLLARAGNLQEALDFIDKMPVQPG 611
Query: 502 AQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGL 561
V+ L C H N + GE A + +L L+P Y+L++NL+ S G W R +
Sbjct: 612 VGVFGAFLHGCGLHSNFDFGEVAIRRMLELHPDQACYYVLISNLYASDGRWGMVKEVREM 671
Query: 562 MDDRRLTKEPGWSQVEID 579
+ R L K PG S VE+D
Sbjct: 672 IKQRGLNKVPGVSLVEMD 689
Score = 202 bits (515), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 138/455 (30%), Positives = 227/455 (49%), Gaps = 20/455 (4%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI N EE L ++ M + + GN FT ++ AC + + GK VH +V+K G
Sbjct: 206 MIVAYVQNECAEEGLMLFNRMREGFLDGNVFTVGSLVTACTKLGCLHQGKWVHGYVIKNG 265
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRL----RSVVSWNSIISAHSRACLNDE 116
+ ++++ T L++MY KC D +R V DE V +V W ++I +++
Sbjct: 266 IEINSYLATSLLNMYVKCGDIGDARSVFDEFSVSTCGGGDDLVFWTAMIVGYTQRGYPQA 325
Query: 117 AI-LVLKEMWVLGLELSASTFVSVVSGCSFRQGISM----HCCVYKLGLLNNEIPLANSV 171
A+ L + W L S T S++S C+ + I M H V K GL ++ L NS+
Sbjct: 326 ALELFTDKKWYRILPNSV-TLASLLSACAQLENIVMGKLLHVLVVKYGL--DDTSLRNSL 382
Query: 172 MSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDL 231
+ MYAK G + +A +F + +VSW ++I GY G+ EA L N+MR S PD
Sbjct: 383 VDMYAKCGLIPDAHYVFATTVDKDVVSWNSVISGYAQSGSAYEALDLFNRMRMESFLPDA 442
Query: 232 VVFLNLILGCAQVGNLFLALSMHSLLLKSGY-NNEDPLDNLLVSMYTKCGDLELARRVFD 290
V + ++ CA VG + LS+H LK G ++ + L++ Y KCGD AR VFD
Sbjct: 443 VTVVGVLSACASVGAHQIGLSLHGFALKYGLVSSSIYVGTALLNFYAKCGDATSARMVFD 502
Query: 291 AVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSK 350
+ EK+ W +MIGG G ++ LF+ +LK + PNE T L+AC+ G + +
Sbjct: 503 GMGEKNAVTWAAMIGGCGMQGDGVGSLALFRDMLKEELVPNEVVFTTLLAACSHSGMVEE 562
Query: 351 GKEIEEYIV--LNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVP-DKDLAVWSAMING 407
G I +++ LN + S + ++ + ++ G + +A + +++P + V+ A ++G
Sbjct: 563 GLMIFDFMCKELNFVPSMKH-YACMVDLLARAGNLQEALDFIDKMPVQPGVGVFGAFLHG 621
Query: 408 YAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILS 442
+H D +M L PD Y ++S
Sbjct: 622 CGLHSNFDFGEVAIRRMLE---LHPDQACYYVLIS 653
Score = 152 bits (383), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 98/287 (34%), Positives = 151/287 (52%), Gaps = 9/287 (3%)
Query: 166 PLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMR-R 224
P +++S+YA FG + AR++F + + S+ II + + N R
Sbjct: 69 PPDTTLISLYASFGFLRHARTLFHRLPSPTHHSFKLIIRWHFLNDVHSHVVSFYNLARTT 128
Query: 225 MSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLEL 284
+ DLVVF L+ +Q+ ++ L +H +LKS + L + LV Y+KCG L
Sbjct: 129 LGSFNDLVVFSILLKTASQLRDIVLTTKLHCNILKSNAADSFVLTS-LVDAYSKCGKLRD 187
Query: 285 ARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAE 344
AR+VFD + ++SV WTSMI Y Q E + LF R+ + + N T+ + ++AC +
Sbjct: 188 ARKVFDEIPDRSVVSWTSMIVAYVQNECAEEGLMLFNRMREGFLDGNVFTVGSLVTACTK 247
Query: 345 LGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVP------DKDL 398
LG L +GK + Y++ NG+E N + TSL++M+ KCG I A+ VF+ DL
Sbjct: 248 LGCLHQGKWVHGYVIKNGIEINSYLATSLLNMYVKCGDIGDARSVFDEFSVSTCGGGDDL 307
Query: 399 AVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACS 445
W+AMI GY G AL LF + L P++V S+LSAC+
Sbjct: 308 VFWTAMIVGYTQRGYPQAALELFTDKKWYRIL-PNSVTLASLLSACA 353
>gi|356502788|ref|XP_003520198.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g63370-like [Glycine max]
Length = 923
Score = 341 bits (875), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 199/627 (31%), Positives = 336/627 (53%), Gaps = 12/627 (1%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+I G+ E LS + M + GV N++TF L+ + + + G +H VLK
Sbjct: 219 IISAHVAEGNCLEALSLFRRMQEVGVASNTYTFVAALQGVEDPSFVKLGMGIHGAVLKSN 278
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
D +V LI MY+KC + +V + M R VSWN+++S + L +A+
Sbjct: 279 HFADVYVANALIAMYAKCGRMEDAGRVFESMLCR--DYVSWNTLLSGLVQNELYSDALNY 336
Query: 121 LKEMWVLGLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
++M G + + +++++ + +G +H + GL +N + + N+++ MYA
Sbjct: 337 FRDMQNSGQKPDQVSVLNLIAASGRSGNLLKGKEVHAYAIRNGLDSN-MQIGNTLVDMYA 395
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K V F+ + E ++SWTTII GY EA L +++ + D ++ +
Sbjct: 396 KCCCVKYMGHAFECMHEKDLISWTTIIAGYAQNEFHLEAINLFRKVQVKGMDVDPMMIGS 455
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
++ C+ + + +H + K + L N +V++Y + G ++ ARR F+++ K
Sbjct: 456 VLRACSGLKSRNFIREIHGYVFKRDLA-DIMLQNAIVNVYGEVGHIDYARRAFESIRSKD 514
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEE 356
+ WTSMI G P EA+ LF L +T+++P+ + + LSA A L SL KGKEI
Sbjct: 515 IVSWTSMITCCVHNGLPVEALELFYSLKQTNIQPDSIAIISALSATANLSSLKKGKEIHG 574
Query: 357 YIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQ 416
+++ G + +SL+ M++ CG + ++++F V +DL +W++MIN +HG G++
Sbjct: 575 FLIRKGFFLEGPIASSLVDMYACCGTVENSRKMFHSVKQRDLILWTSMINANGMHGCGNK 634
Query: 417 ALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCL 476
A+ LF KM + + PD + + ++L ACSHSG++ +G FF+ M+ + +EP EHY C+
Sbjct: 635 AIALFKKMTD-QNVIPDHITFLALLYACSHSGLMVEGKRFFEIMKYGYQLEPWPEHYACM 693
Query: 477 VDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGST 536
VDLL R+ + A + MP++ +++W LL AC H N ELGE AAK LL + ++
Sbjct: 694 VDLLSRSNSLEEAYHFVRNMPIKPSSEIWCALLGACHIHSNKELGELAAKELLQSDTENS 753
Query: 537 GNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSV 596
G Y L++N+F + G W + R M L K PG S +E+D + F+A D+SH +
Sbjct: 754 GKYALISNIFAADGRWNDVEEVRLRMKGNGLKKNPGCSWIEVDNKIHTFMARDKSHPQTD 813
Query: 597 DIRKTLKELHIKLLE--AGYIAEADIV 621
DI L + KLLE GYIA+ V
Sbjct: 814 DIYLKLAQF-TKLLEKKGGYIAQTKFV 839
Score = 227 bits (579), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 150/512 (29%), Positives = 263/512 (51%), Gaps = 15/512 (2%)
Query: 7 NNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAF 66
++G + E + Y M GV ++ TFP VLKAC + G +H +K G+ + F
Sbjct: 122 SSGKYLEAIELYKDMRVLGVAIDACTFPSVLKACGALGESRLGAEIHGVAVKCGYGEFVF 181
Query: 67 VQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRA--CLNDEAILVLKEM 124
V LI MY KC D +R + D + + VSWNSIISAH CL EA+ + + M
Sbjct: 182 VCNALIAMYGKCGDLGGARVLFDGIMMEKEDTVSWNSIISAHVAEGNCL--EALSLFRRM 239
Query: 125 WVLGLELSASTFVSVVSGC---SF-RQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGK 180
+G+ + TFV+ + G SF + G+ +H V K ++ +AN++++MYAK G+
Sbjct: 240 QEVGVASNTYTFVAALQGVEDPSFVKLGMGIHGAVLKSNHF-ADVYVANALIAMYAKCGR 298
Query: 181 VNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILG 240
+ +A +F+ + VSW T++ G V ++A M+ PD V LNLI
Sbjct: 299 MEDAGRVFESMLCRDYVSWNTLLSGLVQNELYSDALNYFRDMQNSGQKPDQVSVLNLIAA 358
Query: 241 CAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLW 300
+ GNL +H+ +++G ++ + N LV MY KC ++ F+ + EK + W
Sbjct: 359 SGRSGNLLKGKEVHAYAIRNGLDSNMQIGNTLVDMYAKCCCVKYMGHAFECMHEKDLISW 418
Query: 301 TSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVL 360
T++I GYAQ + EA+NLF+++ + + + + L AC+ L S + +EI Y+
Sbjct: 419 TTIIAGYAQNEFHLEAINLFRKVQVKGMDVDPMMIGSVLRACSGLKSRNFIREIHGYVFK 478
Query: 361 NGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNL 420
L ++ +Q ++++++ + G I+ A+ FE + KD+ W++MI +G+ +AL L
Sbjct: 479 RDL-ADIMLQNAIVNVYGEVGHIDYARRAFESIRSKDIVSWTSMITCCVHNGLPVEALEL 537
Query: 421 FYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSM-QSNFGIEPSIEHYLCLVDL 479
FY ++ ++PD++ S LSA ++ + G + + F +E I LVD+
Sbjct: 538 FYSLKQTN-IQPDSIAIISALSATANLSSLKKGKEIHGFLIRKGFFLEGPIAS--SLVDM 594
Query: 480 LGRAGRFDLALKTIHEMPVEVQAQVWAPLLSA 511
G + + K H + + +W +++A
Sbjct: 595 YACCGTVENSRKMFHSVK-QRDLILWTSMINA 625
Score = 226 bits (577), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 137/417 (32%), Positives = 229/417 (54%), Gaps = 12/417 (2%)
Query: 35 LVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVR 94
L+L C ++ G+++H+ +LK AF+ T L+ MY KC + KV DEM R
Sbjct: 51 LLLDLCVAAKALPQGQQLHALLLKSHLS--AFLATKLVLMYGKCGSLRDAVKVFDEMSER 108
Query: 95 LRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCSF----RQGIS 150
++ SWN+++ A + EAI + K+M VLG+ + A TF SV+ C R G
Sbjct: 109 --TIFSWNALMGAFVSSGKYLEAIELYKDMRVLGVAIDACTFPSVLKACGALGESRLGAE 166
Query: 151 MHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEI--GETSIVSWTTIIGGYVN 208
+H K G + + N++++MY K G + AR +FD I + VSW +II +V
Sbjct: 167 IHGVAVKCGY-GEFVFVCNALIAMYGKCGDLGGARVLFDGIMMEKEDTVSWNSIISAHVA 225
Query: 209 VGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPL 268
GN EA L +M+ + V + F+ + G + L + +H +LKS + + +
Sbjct: 226 EGNCLEALSLFRRMQEVGVASNTYTFVAALQGVEDPSFVKLGMGIHGAVLKSNHFADVYV 285
Query: 269 DNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSV 328
N L++MY KCG +E A RVF+++L + W +++ G Q S+A+N F+ + +
Sbjct: 286 ANALIAMYAKCGRMEDAGRVFESMLCRDYVSWNTLLSGLVQNELYSDALNYFRDMQNSGQ 345
Query: 329 RPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKE 388
+P++ ++ ++A G+L KGKE+ Y + NGL+SN Q+ +L+ M++KC +
Sbjct: 346 KPDQVSVLNLIAASGRSGNLLKGKEVHAYAIRNGLDSNMQIGNTLVDMYAKCCCVKYMGH 405
Query: 389 VFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACS 445
FE + +KDL W+ +I GYA + +A+NLF K+Q V+G+ D ++ S+L ACS
Sbjct: 406 AFECMHEKDLISWTTIIAGYAQNEFHLEAINLFRKVQ-VKGMDVDPMMIGSVLRACS 461
>gi|225435444|ref|XP_002282803.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g40720-like [Vitis vinifera]
Length = 854
Score = 341 bits (875), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 193/621 (31%), Positives = 321/621 (51%), Gaps = 12/621 (1%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI + G + + L + ML V + T + ++ACA + S+ GK++H +K
Sbjct: 226 MISGYYDVGDYFKALELFVQMLVDEVKFDCVTMLVAVQACAELGSLKLGKQIHQLAIKFE 285
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F +D ++ L++MYS SS ++ + +P R + WNS+ISA++ ++EA+ +
Sbjct: 286 FVEDLYILNALLNMYSNNGSLESSHQLFESVPNRDAPL--WNSMISAYAAFGCHEEAMDL 343
Query: 121 LKEMWVLGLELSASTFVSVVSGCS-----FRQGISMHCCVYKLGLLNNEIPLANSVMSMY 175
M G++ T V ++S C +G S+H V K G+ + L N+++SMY
Sbjct: 344 FIRMQSEGVKKDERTVVIMLSMCEELASGLLKGKSLHAHVIKSGM-RIDASLGNALLSMY 402
Query: 176 AKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFL 235
+ V + IFD + I+SW T+I +A L +MR + P+ +
Sbjct: 403 TELNCVESVQKIFDRMKGVDIISWNTMILALARNTLRAQACELFERMRESEIKPNSYTII 462
Query: 236 NLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEK 295
+++ C V L S+H ++K PL L MY CGD AR +F+ ++
Sbjct: 463 SILAACEDVTCLDFGRSIHGYVMKHSIEINQPLRTALADMYMNCGDEATARDLFEGCPDR 522
Query: 296 SVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIE 355
+ W +MI Y + +A+ LF R++ + PN T+ LS+ L +L +G+ +
Sbjct: 523 DLISWNAMIASYVKNNQAHKALLLFHRMI-SEAEPNSVTIINVLSSFTHLATLPQGQSLH 581
Query: 356 EYIVLNG--LESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGM 413
Y+ G L + + + I M+++CG + A+ +F+ +P +++ W+AMI GY ++G
Sbjct: 582 AYVTRRGFSLGLDLSLANAFITMYARCGSLQSAENIFKTLPKRNIISWNAMIAGYGMNGR 641
Query: 414 GDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHY 473
G A+ F +M +G +P+ V + S+LSACSHSG ++ GL F SM +F + P + HY
Sbjct: 642 GSDAMLAFSQMLE-DGFRPNGVTFVSVLSACSHSGFIEMGLQLFHSMVQDFNVTPELVHY 700
Query: 474 LCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNP 533
C+VDLL R G D A + I MP+E A VW LLS+C + + + + + L L P
Sbjct: 701 SCIVDLLARGGCIDEAREFIDSMPIEPDASVWRALLSSCRAYSDAKQAKTIFEKLDKLEP 760
Query: 534 GSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHH 593
+ GNY+L++N++ +AG+W E R + ++ L K PG S + + V F AGDRSH
Sbjct: 761 MNAGNYVLLSNVYATAGLWLEVRRIRTWLKEKGLRKPPGISWIIVKNQVHCFSAGDRSHP 820
Query: 594 LSVDIRKTLKELHIKLLEAGY 614
S I L L + E GY
Sbjct: 821 QSDKIYAKLSILLSSMRETGY 841
Score = 224 bits (570), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 142/460 (30%), Positives = 242/460 (52%), Gaps = 9/460 (1%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+I++ N + + LS Y+ M GV N+ T PLVLKACA N++ GK +H +
Sbjct: 24 VIKHQANLKNDQAILSAYTQMESLGVLPNNTTLPLVLKACAAQNAVERGKSIHRSIQGTD 83
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
D V T ++D Y KC +R V D M R VV WN+++ + +EA+L+
Sbjct: 84 LMDDVRVGTAVVDFYCKCGFVEDARCVFDAMSDR--DVVLWNAMVYGYVGWGCYEEAMLL 141
Query: 121 LKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
++EM L ++ T V+++ C R G +H + G+ ++ +A +++ Y
Sbjct: 142 VREMGRENLRPNSRTMVALLLACEGASELRLGRGVHGYCLRNGMFDSNPHVATALIGFYL 201
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
+F + +FD + +IVSW +I GY +VG+ +A L QM V D V L
Sbjct: 202 RF-DMRVLPLLFDLMVVRNIVSWNAMISGYYDVGDYFKALELFVQMLVDEVKFDCVTMLV 260
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
+ CA++G+L L +H L +K + + + N L++MY+ G LE + ++F++V +
Sbjct: 261 AVQACAELGSLKLGKQIHQLAIKFEFVEDLYILNALLNMYSNNGSLESSHQLFESVPNRD 320
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGS-LSKGKEIE 355
LW SMI YA G EA++LF R+ V+ +E T+ LS C EL S L KGK +
Sbjct: 321 APLWNSMISAYAAFGCHEEAMDLFIRMQSEGVKKDERTVVIMLSMCEELASGLLKGKSLH 380
Query: 356 EYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGD 415
+++ +G+ + + +L+ M+++ + +++F+R+ D+ W+ MI A + +
Sbjct: 381 AHVIKSGMRIDASLGNALLSMYTELNCVESVQKIFDRMKGVDIISWNTMILALARNTLRA 440
Query: 416 QALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLS 455
QA LF +M+ E +KP++ SIL+AC +D G S
Sbjct: 441 QACELFERMRESE-IKPNSYTIISILAACEDVTCLDFGRS 479
Score = 175 bits (443), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 107/366 (29%), Positives = 194/366 (53%), Gaps = 10/366 (2%)
Query: 85 RKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAIL-VLKEMWVLGLELSASTFVSVVSGC 143
R L ++++ WNS+I H ND+AIL +M LG+ + +T V+ C
Sbjct: 5 RLTLSPTKIQIKDPKHWNSVIK-HQANLKNDQAILSAYTQMESLGVLPNNTTLPLVLKAC 63
Query: 144 ----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSW 199
+ +G S+H + L+ +++ + +V+ Y K G V +AR +FD + + +V W
Sbjct: 64 AAQNAVERGKSIHRSIQGTDLM-DDVRVGTAVVDFYCKCGFVEDARCVFDAMSDRDVVLW 122
Query: 200 TTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLK 259
++ GYV G EA L +M R ++ P+ + L+L C L L +H L+
Sbjct: 123 NAMVYGYVGWGCYEEAMLLVREMGRENLRPNSRTMVALLLACEGASELRLGRGVHGYCLR 182
Query: 260 SGYNNEDP-LDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVN 318
+G + +P + L+ Y + D+ + +FD ++ +++ W +MI GY +G +A+
Sbjct: 183 NGMFDSNPHVATALIGFYLRF-DMRVLPLLFDLMVVRNIVSWNAMISGYYDVGDYFKALE 241
Query: 319 LFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFS 378
LF ++L V+ + T+ + ACAELGSL GK+I + + + + +L++M+S
Sbjct: 242 LFVQMLVDEVKFDCVTMLVAVQACAELGSLKLGKQIHQLAIKFEFVEDLYILNALLNMYS 301
Query: 379 KCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYT 438
G + + ++FE VP++D +W++MI+ YA G ++A++LF +MQ EG+K D
Sbjct: 302 NNGSLESSHQLFESVPNRDAPLWNSMISAYAAFGCHEEAMDLFIRMQS-EGVKKDERTVV 360
Query: 439 SILSAC 444
+LS C
Sbjct: 361 IMLSMC 366
Score = 105 bits (262), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 72/251 (28%), Positives = 123/251 (49%), Gaps = 3/251 (1%)
Query: 199 WTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLL 258
W ++I N+ N QM + V P+ ++ CA + S+H +
Sbjct: 21 WNSVIKHQANLKNDQAILSAYTQMESLGVLPNNTTLPLVLKACAAQNAVERGKSIHRSIQ 80
Query: 259 KSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVN 318
+ ++ + +V Y KCG +E AR VFDA+ ++ V LW +M+ GY G EA+
Sbjct: 81 GTDLMDDVRVGTAVVDFYCKCGFVEDARCVFDAMSDRDVVLWNAMVYGYVGWGCYEEAML 140
Query: 319 LFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGL-ESNRQVQTSLIHMF 377
L + + + ++RPN T+ L AC L G+ + Y + NG+ +SN V T+LI +
Sbjct: 141 LVREMGRENLRPNSRTMVALLLACEGASELRLGRGVHGYCLRNGMFDSNPHVATALIGFY 200
Query: 378 SKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVY 437
+ + +F+ + +++ W+AMI+GY G +AL LF +M V+ +K D V
Sbjct: 201 LRFD-MRVLPLLFDLMVVRNIVSWNAMISGYYDVGDYFKALELFVQML-VDEVKFDCVTM 258
Query: 438 TSILSACSHSG 448
+ AC+ G
Sbjct: 259 LVAVQACAELG 269
>gi|359492976|ref|XP_002283668.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Vitis vinifera]
Length = 762
Score = 341 bits (874), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 194/624 (31%), Positives = 340/624 (54%), Gaps = 33/624 (5%)
Query: 11 FEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTG 70
F E LS ++ G S + +L+ C + + D +++H+H++K G +DAF+ T
Sbjct: 54 FREALS----FIREGTKVESAFYVPILQECIDKKLVSDAQKIHAHIVKTGAHKDAFLMTF 109
Query: 71 LIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEM------ 124
L+++Y+KC ++RKV DE+P R+VVSW ++++ + + A+ V +EM
Sbjct: 110 LVNVYAKCGTMETARKVFDELP--RRNVVSWTTLMTGYVHDSKPELAVQVFREMLEAGAY 167
Query: 125 ---WVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKV 181
+ LG LSAS S + + I + Y++ + + NS+ S+Y+K G +
Sbjct: 168 PTNYTLGTALSAS---SDLHSKELGKQIHGYSIKYRIEF---DASIGNSLCSLYSKCGSL 221
Query: 182 NEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGC 241
A F I + +++SWTT+I + + G +M V P+ + + C
Sbjct: 222 ECAVKAFRRIRDKNVISWTTVISAWGDNGEAATGLQFFVEMLSECVEPNEFTLTSALSLC 281
Query: 242 AQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWT 301
+ +L + +HSL +K G+ + P+ N ++ +Y KCG + A+++FD + S+ W
Sbjct: 282 CVMQSLDIGTQIHSLTIKLGFESNLPIKNSIMYLYLKCGWIHEAKKLFDEMETISLVTWN 341
Query: 302 SMIGGYAQL-----------GYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSK 350
+MI G+A++ +EA+++F +L ++ ++P+ T ++ LS C+ L +L +
Sbjct: 342 AMIAGHARMMDFAKDDLAAHQCGTEALSIFLKLNRSGMKPDLFTFSSVLSVCSSLVALEQ 401
Query: 351 GKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAI 410
G+++ + G S+ V T+L++M++KCG I +A + F + + L W++MI GYA
Sbjct: 402 GEQVHAQTIKTGFLSDVVVGTALVNMYNKCGSIERASKAFVEMSIRTLISWTSMITGYAQ 461
Query: 411 HGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSI 470
+G QAL LF M+ + G++P+ + + +LSACSH+GMVD+ L +F+ M++ + I P +
Sbjct: 462 NGQPQQALLLFEDMR-LAGVRPNKITFVGVLSACSHAGMVDEALDYFQMMKNEYKITPVM 520
Query: 471 EHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLT 530
+HY CL+D+ R GR D A I EM +E +W+ L++ C +ELG YAA+ LL
Sbjct: 521 DHYACLIDMFVRLGRLDEAFDFIKEMDLEPNEFIWSILIAGCRSQGKLELGFYAAEQLLN 580
Query: 531 LNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDR 590
L P T Y L+ N++ SAG WKE + R +M + +L + WS + I + F R
Sbjct: 581 LKPKDTETYNLLLNMYLSAGKWKEVSRVRKMMKEEKLGRLKDWSWISIKDKIYSFKRNAR 640
Query: 591 SHHLSVDIRKTLKELHIKLLEAGY 614
SH S ++ + L LH K GY
Sbjct: 641 SHAQSGEMYELLGNLHEKAKSFGY 664
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 85/321 (26%), Positives = 154/321 (47%), Gaps = 28/321 (8%)
Query: 7 NNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAF 66
+NG L + ML V N FT L C + S+ G ++HS +K+GF+ +
Sbjct: 248 DNGEAATGLQFFVEMLSECVEPNEFTLTSALSLCCVMQSLDIGTQIHSLTIKLGFESNLP 307
Query: 67 VQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRAC-----------LND 115
++ ++ +Y KC ++K+ DEM S+V+WN++I+ H+R
Sbjct: 308 IKNSIMYLYLKCGWIHEAKKLFDEMET--ISLVTWNAMIAGHARMMDFAKDDLAAHQCGT 365
Query: 116 EAILVLKEMWVLGLELSASTF----VSVVSGCSFRQGISMHCCVYKLGLLNNEIPLANSV 171
EA+ + ++ G++ TF S + QG +H K G L++ + + ++
Sbjct: 366 EALSIFLKLNRSGMKPDLFTFSSVLSVCSSLVALEQGEQVHAQTIKTGFLSD-VVVGTAL 424
Query: 172 MSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDL 231
++MY K G + A F E+ +++SWT++I GY G +A L MR V P+
Sbjct: 425 VNMYNKCGSIERASKAFVEMSIRTLISWTSMITGYAQNGQPQQALLLFEDMRLAGVRPNK 484
Query: 232 VVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNL--LVSMYTKCGDLELARRVF 289
+ F+ ++ C+ G + AL ++K+ Y +D+ L+ M+ + G L+ A F
Sbjct: 485 ITFVGVLSACSHAGMVDEALDYFQ-MMKNEYKITPVMDHYACLIDMFVRLGRLDEA---F 540
Query: 290 DAV----LEKSVFLWTSMIGG 306
D + LE + F+W+ +I G
Sbjct: 541 DFIKEMDLEPNEFIWSILIAG 561
>gi|357167109|ref|XP_003581008.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Brachypodium distachyon]
Length = 921
Score = 341 bits (874), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 204/641 (31%), Positives = 327/641 (51%), Gaps = 51/641 (7%)
Query: 18 YSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSK 77
+ M G + F VL A + + + + VLK GF+ D + T ++++Y++
Sbjct: 211 FRMMHHEGASPDQSNFASVLSAVTGLQDLGVLEVLRPLVLKTGFESDVVIGTSILNVYTR 270
Query: 78 -CSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTF 136
S + K D M R + +W+++I+A S D AI V
Sbjct: 271 DASALDIAIKFFDGMVER--NEYTWSTMIAALSHGGRIDAAIAVYGR----------DPV 318
Query: 137 VSVVSGCSFRQGISMHCCVYKLGLLNNEIPLA-----NSVMSMYAKFGKVNEARSIFDEI 191
S+ S + G++ + + +L +IP N++++ Y + G V+EA+ +FD +
Sbjct: 319 KSIPSQTALLTGLARCGRITEARILFEQIPDPIVVSWNAMITGYMQNGMVDEAKELFDRM 378
Query: 192 GETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLAL 251
+ +SW +I GY G EA L + R + P L + L C+ +G L
Sbjct: 379 PFRNTISWAGMIAGYAQNGRSEEALDLLQALHRNGMLPSLSSLTSSFLACSHIGALETGR 438
Query: 252 SMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLEL--------------------------- 284
+HSL +K+G + N L+SMY KC ++E
Sbjct: 439 QVHSLAVKAGCQFNSYVCNALISMYGKCRNMEYVRQVFNRMRVKDTVSWNSFIAALVQNN 498
Query: 285 ----ARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLS 340
AR +FD +L + V WT++I YAQ EAV FK +L +PN L LS
Sbjct: 499 MLEDARHIFDNMLSRDVVSWTTIISAYAQAERGDEAVEFFKTMLHEHEKPNSPILTILLS 558
Query: 341 ACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAV 400
C LGS G++I + +G++S V +L+ M+ KCG + K VF+ + ++D+
Sbjct: 559 VCGGLGSAKLGQQIHTVAIKHGMDSELIVANALMSMYFKCGCADSHK-VFDSMEERDIFT 617
Query: 401 WSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSM 460
W+ I G A HG+G +A+ ++ M+ V G+ P+ V + +L+ACSH+G+VD+G FFKSM
Sbjct: 618 WNTFITGCAQHGLGREAIKMYEHMESV-GVLPNEVTFVGLLNACSHAGLVDEGWQFFKSM 676
Query: 461 QSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVEL 520
++G+ P +EHY C+VDLLGR G A K I++MP+E +W+ LL AC H N E+
Sbjct: 677 SRDYGLTPLLEHYACMVDLLGRTGDVQGAEKFIYDMPIEPDTVIWSALLGACKIHKNAEI 736
Query: 521 GEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDG 580
G AA+ L T P + GNY++++N+++S GMW E A R +M R ++KEPG S ++I
Sbjct: 737 GRRAAEKLFTTEPSNAGNYVMLSNIYSSLGMWVEVAELRKIMKQRGVSKEPGCSWMQIRN 796
Query: 581 SVQVFVAGDRSHHLSVDIRKTLKELHIKLLEAGYIAEADIV 621
V FV GD+ H +I TL++L+ L GY+ + + V
Sbjct: 797 KVHSFVTGDKQHEKIEEIDYTLQDLYTLLRGTGYVPDTEFV 837
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 110/503 (21%), Positives = 241/503 (47%), Gaps = 58/503 (11%)
Query: 64 DAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKE 123
D + I ++ +R+V D MP R +++WNS+ISA+ + + ++A ++
Sbjct: 32 DKSAHSARIRELARLGRLREAREVFDAMP--HRDIIAWNSMISAYCNSGMLEDARILFDA 89
Query: 124 MWVLGLELSASTFV--------------SVVSGCSFRQGISMHCCVYKLGLLNNEIPLA- 168
+ G + +T + V G R ++ + V + N +I +A
Sbjct: 90 --ISGGNVRTATILLSGYARLGRVLDARRVFDGMPERNTVAWNAMV-SCYVQNGDITMAR 146
Query: 169 --------------NSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNE 214
NS+++ Y ++ +A ++F ++ + ++V+WT +I GYV + +
Sbjct: 147 RLFDAMPSRDVTSWNSMVTGYCHSRQMVDAWNLFKQMPQRNLVTWTVMISGYVRIEQHGK 206
Query: 215 AFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVS 274
+ + M +PD F +++ + +L + + L+LK+G+ ++ + +++
Sbjct: 207 GWDIFRMMHHEGASPDQSNFASVLSAVTGLQDLGVLEVLRPLVLKTGFESDVVIGTSILN 266
Query: 275 MYTK-CGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEA 333
+YT+ L++A + FD ++E++ + W++MI + G A+ ++ R S+ P++
Sbjct: 267 VYTRDASALDIAIKFFDGMVERNEYTWSTMIAALSHGGRIDAAIAVYGRDPVKSI-PSQT 325
Query: 334 TLATTLSACAELGSLSKGK----EIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEV 389
L T L+ C G +++ + +I + IV++ ++I + + G +++AKE+
Sbjct: 326 ALLTGLARC---GRITEARILFEQIPDPIVVS--------WNAMITGYMQNGMVDEAKEL 374
Query: 390 FERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGM 449
F+R+P ++ W+ MI GYA +G ++AL+L + H G+ P TS ACSH G
Sbjct: 375 FDRMPFRNTISWAGMIAGYAQNGRSEEALDLLQAL-HRNGMLPSLSSLTSSFLACSHIGA 433
Query: 450 VDDGLSFFKSMQSNFGIEPSIEHYLC--LVDLLGRAGRFDLALKTIHEMPVEVQAQVWAP 507
++ G S+ G + Y+C L+ + G+ + + + M V+ W
Sbjct: 434 LETGRQ-VHSLAVKAGCQ--FNSYVCNALISMYGKCRNMEYVRQVFNRMRVKDTVS-WNS 489
Query: 508 LLSACMKHHNVELGEYAAKNLLT 530
++A ++++ +E + N+L+
Sbjct: 490 FIAALVQNNMLEDARHIFDNMLS 512
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 91/348 (26%), Positives = 159/348 (45%), Gaps = 51/348 (14%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI NG EE L ++ + G+ + + AC++I ++ G++VHS +K G
Sbjct: 389 MIAGYAQNGRSEEALDLLQALHRNGMLPSLSSLTSSFLACSHIGALETGRQVHSLAVKAG 448
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVR-------------------------- 94
Q +++V LI MY KC + R+V + M V+
Sbjct: 449 CQFNSYVCNALISMYGKCRNMEYVRQVFNRMRVKDTVSWNSFIAALVQNNMLEDARHIFD 508
Query: 95 ---LRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGC----SFRQ 147
R VVSW +IISA+++A DEA+ K M + ++ ++S C S +
Sbjct: 509 NMLSRDVVSWTTIISAYAQAERGDEAVEFFKTMLHEHEKPNSPILTILLSVCGGLGSAKL 568
Query: 148 GISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYV 207
G +H K G +++E+ +AN++MSMY K G ++ +FD + E I +W T I G
Sbjct: 569 GQQIHTVAIKHG-MDSELIVANALMSMYFKCG-CADSHKVFDSMEERDIFTWNTFITGCA 626
Query: 208 NVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVG------NLFLALSMHSLLLKSG 261
G EA + M + V P+ V F+ L+ C+ G F ++S
Sbjct: 627 QHGLGREAIKMYEHMESVGVLPNEVTFVGLLNACSHAGLVDEGWQFFKSMS-------RD 679
Query: 262 YNNEDPLDNL--LVSMYTKCGDLELARR-VFDAVLEKSVFLWTSMIGG 306
Y L++ +V + + GD++ A + ++D +E +W++++G
Sbjct: 680 YGLTPLLEHYACMVDLLGRTGDVQGAEKFIYDMPIEPDTVIWSALLGA 727
>gi|242064134|ref|XP_002453356.1| hypothetical protein SORBIDRAFT_04g004500 [Sorghum bicolor]
gi|241933187|gb|EES06332.1| hypothetical protein SORBIDRAFT_04g004500 [Sorghum bicolor]
Length = 807
Score = 341 bits (874), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 187/597 (31%), Positives = 324/597 (54%), Gaps = 43/597 (7%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANI--------NSIWDGKRV 52
M+ +G+ ++ L ++ M ++ + + VL ACA +I + +
Sbjct: 214 MMGGLAQSGAVDDALRLFARMSRSAIRVDPVAVSSVLGACAQACAGDYNVARAIRLAQSI 273
Query: 53 HSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRAC 112
H+ V++ GF D V LIDMY+K + KV + M S+VSWN +++ + +
Sbjct: 274 HALVVRKGFDSDQHVGNSLIDMYAKGMKMDEAMKVFESMSSV--SIVSWNILVTGYGQLG 331
Query: 113 LNDEAILVLKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGLLNNEIPLANSVM 172
+ A+ VL M G E + T+ ++++ C
Sbjct: 332 CYERALEVLDLMQESGFEPNEVTYSNMLASC----------------------------- 362
Query: 173 SMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLV 232
K V AR++FD+I + S+ +W T++ GY + L +M+ +V PD
Sbjct: 363 ---IKARDVPSARAMFDKISKPSVTTWNTLLSGYGQEELHQDTIELFRRMQHQNVQPDRT 419
Query: 233 VFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAV 292
++ C+++G L L +HS +K +N+ + + L+ MY+KCG + +A+ +F+ +
Sbjct: 420 TLAVILSTCSRLGILELGKQVHSASVKLLLHNDMFVASGLIDMYSKCGQVGIAQIIFNMM 479
Query: 293 LEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGK 352
E+ V W SMI G A EA + FK++ + + P E++ A+ +++CA L S+ +G+
Sbjct: 480 TERDVVCWNSMISGLAIHSLNEEAFDFFKQMRENGMFPTESSYASMINSCARLSSIPQGR 539
Query: 353 EIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHG 412
+I ++ +G + N V +SLI M++KCG ++ A+ F + K++ W+ MI+GYA +G
Sbjct: 540 QIHAQVLKDGYDQNVYVGSSLIDMYAKCGNMDDARLFFNCMIVKNIVAWNEMIHGYAQNG 599
Query: 413 MGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEH 472
G++A+ LF M + KPD+V + ++L+ CSHSG+VD+ +++F SM+SN+GI P +EH
Sbjct: 600 FGEKAVELFEYMLTTK-QKPDSVTFIAVLTGCSHSGLVDEAIAYFNSMESNYGIRPLVEH 658
Query: 473 YLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLN 532
Y CL+D LGRAGRF + I +MP + A +W LL+AC+ HHN ELGE+AAK+L L+
Sbjct: 659 YTCLIDALGRAGRFAEVVAVIDKMPYKDDAILWEVLLAACVVHHNAELGEFAAKHLFRLD 718
Query: 533 PGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGD 589
P + Y+L++N++ + G +A+ R LM R + K G+S V + F+ D
Sbjct: 719 PKNPSPYVLLSNIYATLGRHGDASAVRALMSSRGVVKGRGYSWVNHKDGARAFMVAD 775
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 122/491 (24%), Positives = 232/491 (47%), Gaps = 83/491 (16%)
Query: 77 KCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTF 136
+ D ++R +L MP R + VSWN++I+A +R+ EA+ + + M GL + T
Sbjct: 88 RAGDLAAARDLLGRMPDR--NAVSWNTVIAAVARSDSPGEALEMYRGMLQEGLAPTNFTL 145
Query: 137 VSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIG 192
SV+S C + G H K+GL N+ + N ++ MY K G V +A +FD +
Sbjct: 146 ASVLSACGAVAALDDGRRCHGLAVKVGLDGNQF-VENGLLGMYTKCGSVADAVRLFDWMS 204
Query: 193 ETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQ--VGN---- 246
+ VS+T ++GG G V++A L +M R ++ D V +++ CAQ G+
Sbjct: 205 SPNEVSFTAMMGGLAQSGAVDDALRLFARMSRSAIRVDPVAVSSVLGACAQACAGDYNVA 264
Query: 247 --LFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMI 304
+ LA S+H+L+++ G++++ + N L+ MY K ++ A +VF+++ S+ W ++
Sbjct: 265 RAIRLAQSIHALVVRKGFDSDQHVGNSLIDMYAKGMKMDEAMKVFESMSSVSIVSWNILV 324
Query: 305 GGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYI------ 358
GY QLG A+ + + ++ PNE T + L++C + + + + + I
Sbjct: 325 TGYGQLGCYERALEVLDLMQESGFEPNEVTYSNMLASCIKARDVPSARAMFDKISKPSVT 384
Query: 359 ----VLNG-----------------------------------------LESNRQVQTS- 372
+L+G LE +QV ++
Sbjct: 385 TWNTLLSGYGQEELHQDTIELFRRMQHQNVQPDRTTLAVILSTCSRLGILELGKQVHSAS 444
Query: 373 ---LIH-----------MFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQAL 418
L+H M+SKCG++ A+ +F + ++D+ W++MI+G AIH + ++A
Sbjct: 445 VKLLLHNDMFVASGLIDMYSKCGQVGIAQIIFNMMTERDVVCWNSMISGLAIHSLNEEAF 504
Query: 419 NLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVD 478
+ F +M+ G+ P Y S++++C+ + G + + G + ++ L+D
Sbjct: 505 DFFKQMRE-NGMFPTESSYASMINSCARLSSIPQGRQIHAQVLKD-GYDQNVYVGSSLID 562
Query: 479 LLGRAGRFDLA 489
+ + G D A
Sbjct: 563 MYAKCGNMDDA 573
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 92/365 (25%), Positives = 176/365 (48%), Gaps = 17/365 (4%)
Query: 169 NSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVT 228
N+ +S + G + AR + + + + VSW T+I + EA + M + +
Sbjct: 80 NAAISAACRAGDLAAARDLLGRMPDRNAVSWNTVIAAVARSDSPGEALEMYRGMLQEGLA 139
Query: 229 PDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRV 288
P +++ C V L H L +K G + ++N L+ MYTKCG + A R+
Sbjct: 140 PTNFTLASVLSACGAVAALDDGRRCHGLAVKVGLDGNQFVENGLLGMYTKCGSVADAVRL 199
Query: 289 FDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAE---- 344
FD + + +T+M+GG AQ G +A+ LF R+ ++++R + +++ L ACA+
Sbjct: 200 FDWMSSPNEVSFTAMMGGLAQSGAVDDALRLFARMSRSAIRVDPVAVSSVLGACAQACAG 259
Query: 345 ----LGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAV 400
++ + I +V G +S++ V SLI M++K ++++A +VFE + +
Sbjct: 260 DYNVARAIRLAQSIHALVVRKGFDSDQHVGNSLIDMYAKGMKMDEAMKVFESMSSVSIVS 319
Query: 401 WSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSM 460
W+ ++ GY G ++AL + MQ G +P+ V Y+++L++C + V + F +
Sbjct: 320 WNILVTGYGQLGCYERALEVLDLMQE-SGFEPNEVTYSNMLASCIKARDVPSARAMFDKI 378
Query: 461 QSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMP---VEVQAQVWAPLLSACMKHHN 517
+PS+ + L+ G+ ++ M V+ A +LS C +
Sbjct: 379 S-----KPSVTTWNTLLSGYGQEELHQDTIELFRRMQHQNVQPDRTTLAVILSTCSRLGI 433
Query: 518 VELGE 522
+ELG+
Sbjct: 434 LELGK 438
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 78/304 (25%), Positives = 141/304 (46%), Gaps = 17/304 (5%)
Query: 270 NLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVR 329
N +S + GDL AR + + +++ W ++I A+ P EA+ +++ +L+ +
Sbjct: 80 NAAISAACRAGDLAAARDLLGRMPDRNAVSWNTVIAAVARSDSPGEALEMYRGMLQEGLA 139
Query: 330 PNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEV 389
P TLA+ LSAC + +L G+ V GL+ N+ V+ L+ M++KCG + A +
Sbjct: 140 PTNFTLASVLSACGAVAALDDGRRCHGLAVKVGLDGNQFVENGLLGMYTKCGSVADAVRL 199
Query: 390 FERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGM 449
F+ + + ++AM+ G A G D AL LF +M ++ D V +S+L AC+ +
Sbjct: 200 FDWMSSPNEVSFTAMMGGLAQSGAVDDALRLFARMSR-SAIRVDPVAVSSVLGACAQACA 258
Query: 450 VD----DGLSFFKSMQS---NFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQA 502
D + +S+ + G + L+D+ + + D A+K M V
Sbjct: 259 GDYNVARAIRLAQSIHALVVRKGFDSDQHVGNSLIDMYAKGMKMDEAMKVFESMS-SVSI 317
Query: 503 QVWAPLLSACMKHHNVELGEYA-AKNLLTL--NPGSTGNYILMANLFTSAGMWKEAATAR 559
W L++ +LG Y A +L L G N + +N+ S ++ +AR
Sbjct: 318 VSWNILVTG-----YGQLGCYERALEVLDLMQESGFEPNEVTYSNMLASCIKARDVPSAR 372
Query: 560 GLMD 563
+ D
Sbjct: 373 AMFD 376
>gi|225446273|ref|XP_002266689.1| PREDICTED: pentatricopeptide repeat-containing protein At2g34400
[Vitis vinifera]
gi|296090299|emb|CBI40118.3| unnamed protein product [Vitis vinifera]
Length = 618
Score = 341 bits (874), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 197/592 (33%), Positives = 326/592 (55%), Gaps = 16/592 (2%)
Query: 36 VLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRL 95
+LK C + S+ +++H+ ++ + F+ ID+ DF ++ + ++P
Sbjct: 37 LLKQCTSTKSL---QQIHTQMIINAIHKPNFLLHRFIDL----KDFNNASLLFSQIP--Y 87
Query: 96 RSVVSWNSIISAHSRACLN-DEAILVLKEMWVLGLELSASTFVSVVSGCS----FRQGIS 150
+ ++N +I + + I +M G+ + T+ V C+ G
Sbjct: 88 PNEYAFNIMIRGLTTTWQKFNLTIEFYYQMKDFGIRPNNFTYPFVFIACANLLVLNHGQC 147
Query: 151 MHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVG 210
H V K GL + + +S+++MY++ G++ AR +FDEI E +VSW ++I GY +G
Sbjct: 148 AHSGVLKSGLCADG-HVRHSLITMYSRCGELGCARRVFDEISEKDLVSWNSMISGYSRMG 206
Query: 211 NVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDN 270
+A GL +MR PD + ++++ C +G+L L + ++++ + + +
Sbjct: 207 YAGDAVGLFGEMRDAGFEPDEMTLVSILGACGDLGDLGLGSWIEGFVVENEMDLNSFVGS 266
Query: 271 LLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRP 330
L+ MY KCGDL ARRVFD +++K V W +MI GYAQ G EA+ LF + ++ V P
Sbjct: 267 ALIGMYGKCGDLSSARRVFDRMVKKDVVTWNAMITGYAQNGVSDEAIILFSGMRESGVNP 326
Query: 331 NEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVF 390
++ TL LSACA +G+L GK ++ Y GL+++ V T+LI M++KCG ++ A VF
Sbjct: 327 DKITLVGVLSACASIGALDFGKWLDTYASERGLQNDIYVSTALIDMYAKCGSLDDALRVF 386
Query: 391 ERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEG-LKPDAVVYTSILSACSHSGM 449
E +P K+ W+AMI+ A HG ++L+LF +M G ++P+ + + +LSAC H+G+
Sbjct: 387 EDMPQKNEVSWNAMISALAFHGRPQESLSLFKRMSKEGGAVRPNDISFIGVLSACVHAGL 446
Query: 450 VDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLL 509
VD+G F M S+FG+ P IEH+ C+VDLL RAG A I +MP + V LL
Sbjct: 447 VDEGRQLFDLMSSSFGLVPKIEHHSCMVDLLARAGHVHEAWDFIEKMPEKPDEVVLGALL 506
Query: 510 SACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTK 569
AC K NV++ E LL + P ++GNYI+ + +F + W ++A R LM R +TK
Sbjct: 507 GACQKRRNVDVSERVMHMLLEMEPLNSGNYIISSKIFANMKRWDDSARMRVLMRQRGVTK 566
Query: 570 EPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKELHIKLLEAGYIAEADIV 621
PG S +EI+ V F AGD H +S D+ + + L+ ++ GY + D +
Sbjct: 567 TPGCSWIEIENQVHEFHAGDVLHFISQDMCQVINLLNEEMKVEGYGPKVDFL 618
Score = 217 bits (552), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 130/414 (31%), Positives = 221/414 (53%), Gaps = 12/414 (2%)
Query: 1 MIRN-STNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKV 59
MIR +T F T+ Y M G+ N+FT+P V ACAN+ + G+ HS VLK
Sbjct: 96 MIRGLTTTWQKFNLTIEFYYQMKDFGIRPNNFTYPFVFIACANLLVLNHGQCAHSGVLKS 155
Query: 60 GFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAIL 119
G D V+ LI MYS+C + +R+V DE + + +VSWNS+IS +SR +A+
Sbjct: 156 GLCADGHVRHSLITMYSRCGELGCARRVFDE--ISEKDLVSWNSMISGYSRMGYAGDAVG 213
Query: 120 VLKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGLLNNEIPL----ANSVMSMY 175
+ EM G E T VS++ C + + + ++ NE+ L ++++ MY
Sbjct: 214 LFGEMRDAGFEPDEMTLVSILGACGDLGDLGLGSWIEGF-VVENEMDLNSFVGSALIGMY 272
Query: 176 AKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFL 235
K G ++ AR +FD + + +V+W +I GY G +EA L + MR V PD + +
Sbjct: 273 GKCGDLSSARRVFDRMVKKDVVTWNAMITGYAQNGVSDEAIILFSGMRESGVNPDKITLV 332
Query: 236 NLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEK 295
++ CA +G L + + + G N+ + L+ MY KCG L+ A RVF+ + +K
Sbjct: 333 GVLSACASIGALDFGKWLDTYASERGLQNDIYVSTALIDMYAKCGSLDDALRVFEDMPQK 392
Query: 296 SVFLWTSMIGGYAQLGYPSEAVNLFKRLLKT--SVRPNEATLATTLSACAELGSLSKGKE 353
+ W +MI A G P E+++LFKR+ K +VRPN+ + LSAC G + +G++
Sbjct: 393 NEVSWNAMISALAFHGRPQESLSLFKRMSKEGGAVRPNDISFIGVLSACVHAGLVDEGRQ 452
Query: 354 IEEYIVLN-GLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDK-DLAVWSAMI 405
+ + + + GL + + ++ + ++ G +++A + E++P+K D V A++
Sbjct: 453 LFDLMSSSFGLVPKIEHHSCMVDLLARAGHVHEAWDFIEKMPEKPDEVVLGALL 506
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 124/266 (46%), Gaps = 44/266 (16%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI NG +E + +S M ++GV+ + T VL ACA+I ++ GK + ++ + G
Sbjct: 299 MITGYAQNGVSDEAIILFSGMRESGVNPDKITLVGVLSACASIGALDFGKWLDTYASERG 358
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
Q D +V T LIDMY+KC + +V ++MP ++ VSWN++ISA + E++ +
Sbjct: 359 LQNDIYVSTALIDMYAKCGSLDDALRVFEDMPQ--KNEVSWNAMISALAFHGRPQESLSL 416
Query: 121 LKEMWVLGLELSAS--TFVSVVSGCSFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKF 178
K M G + + +F+ V+S C +H
Sbjct: 417 FKRMSKEGGAVRPNDISFIGVLSAC-------VHA------------------------- 444
Query: 179 GKVNEARSIFDEIGET-----SIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVV 233
G V+E R +FD + + I + ++ G+V+EA+ + +M PD VV
Sbjct: 445 GLVDEGRQLFDLMSSSFGLVPKIEHHSCMVDLLARAGHVHEAWDF---IEKMPEKPDEVV 501
Query: 234 FLNLILGCAQVGNLFLALSMHSLLLK 259
L+ C + N+ ++ + +LL+
Sbjct: 502 LGALLGACQKRRNVDVSERVMHMLLE 527
>gi|225438217|ref|XP_002263704.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49740-like [Vitis vinifera]
Length = 729
Score = 341 bits (874), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 191/577 (33%), Positives = 316/577 (54%), Gaps = 6/577 (1%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+I N E L+ + M Q GV + +TF VL C+ + + G+ VH+ V+K G
Sbjct: 156 IITGCAENKHTEIALNLFREMHQLGVRHDKYTFASVLSLCS-LELLDFGREVHTLVIKTG 214
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F A V L+ MY + +V +E + +++N +I + ++EA+++
Sbjct: 215 FLVRASVINALLTMYFNSGKVADAYEVFEEAESTVHDDITFNVMIGGLASVGRDEEALIM 274
Query: 121 LKEMWVLGLELSASTFVSVVSGCS-FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFG 179
KEM L + TFVSV+S CS R +H K+G P++N+ M+MY+ G
Sbjct: 275 FKEMQEACLRPTELTFVSVMSSCSSARVSHQVHAQAIKMGF-EACTPVSNAAMTMYSSCG 333
Query: 180 KVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLIL 239
++ +FD + E ++SW II Y A QM+R + PD +L+
Sbjct: 334 NLHAVHMVFDRLEEKDLISWNIIIMNYAQGNFYRLAILAFLQMQRAGIEPDEFTIGSLL- 392
Query: 240 GCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFL 299
A +L + +L+ K+G N++ + N LVS ++K G +E A +VF+ + ++
Sbjct: 393 --ASSESLEIVKMFQALVSKNGLNSKIEVSNALVSAFSKHGQIEQAYQVFNNMSSPNLIS 450
Query: 300 WTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIV 359
W ++I G+ G+ + + F LL ++++PN TL+ LS CA + +L GK+I YI+
Sbjct: 451 WNTIISGFLFNGFTLQGLEQFYELLMSTLKPNAYTLSIVLSICASISALRHGKQIHGYIL 510
Query: 360 LNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALN 419
+G+ S + +LI M++KCG ++ + +F + +D+ W+AMI+ YA HG G +A++
Sbjct: 511 RSGVFSVTSLGNALITMYAKCGDLDWSLRIFNVMNGRDIVSWNAMISAYAQHGKGKEAVH 570
Query: 420 LFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDL 479
F MQ G+KPD +T++LSACSH+G+VDDG F SM +++G EP +H C+VDL
Sbjct: 571 FFKAMQDSGGVKPDQATFTAVLSACSHAGLVDDGTRIFNSMVNDYGFEPGADHLSCIVDL 630
Query: 480 LGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNY 539
LGRAG + A + I+ +++ + +W L SAC H N+ LG A LL + Y
Sbjct: 631 LGRAGYLEEAERLINSKHLKIVSSIWWTLFSACAAHGNLRLGRIVAGFLLEIEQNDPAVY 690
Query: 540 ILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQV 576
+L++N++ +AG W+EAA R LM R+ K+PG S +
Sbjct: 691 VLLSNIYAAAGQWEEAANTRDLMQKTRVAKQPGCSWI 727
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 140/550 (25%), Positives = 258/550 (46%), Gaps = 49/550 (8%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+ R+ N+ S + + +SS H FT L ACAN+ G ++H++ ++ G
Sbjct: 27 LTRSHHNSASVQLFVQIHSSNYLKPDH---FTLSSTLTACANLRYAASGNQLHAYSIQTG 83
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMP--------------VRLRSV-------- 98
+ V L+ Y+K D VS ++V +E+ +L +
Sbjct: 84 LKAYTHVGNTLLSFYAKSKDLVSVQRVFNEIENPDVYSWTTLLSACTKLGQIGYACHLFN 143
Query: 99 -------VSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCSFRQ---G 148
V WN+II+ + + A+ + +EM LG+ TF SV+S CS G
Sbjct: 144 QTPRMIPVVWNAIITGCAENKHTEIALNLFREMHQLGVRHDKYTFASVLSLCSLELLDFG 203
Query: 149 ISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSI---VSWTTIIGG 205
+H V K G L + N++++MY GKV +A +F+E E+++ +++ +IGG
Sbjct: 204 REVHTLVIKTGFL-VRASVINALLTMYFNSGKVADAYEVFEE-AESTVHDDITFNVMIGG 261
Query: 206 YVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNE 265
+VG EA + +M+ + P + F++++ C+ ++ +H+ +K G+
Sbjct: 262 LASVGRDEEALIMFKEMQEACLRPTELTFVSVMSSCSSAR---VSHQVHAQAIKMGFEAC 318
Query: 266 DPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLK 325
P+ N ++MY+ CG+L VFD + EK + W +I YAQ + A+ F ++ +
Sbjct: 319 TPVSNAAMTMYSSCGNLHAVHMVFDRLEEKDLISWNIIIMNYAQGNFYRLAILAFLQMQR 378
Query: 326 TSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINK 385
+ P+E T+ + L++ SL K + + NGL S +V +L+ FSK G+I +
Sbjct: 379 AGIEPDEFTIGSLLASSE---SLEIVKMFQALVSKNGLNSKIEVSNALVSAFSKHGQIEQ 435
Query: 386 AKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACS 445
A +VF + +L W+ +I+G+ +G Q L FY++ + LKP+A + +LS C+
Sbjct: 436 AYQVFNNMSSPNLISWNTIISGFLFNGFTLQGLEQFYELL-MSTLKPNAYTLSIVLSICA 494
Query: 446 HSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVW 505
+ G + + G+ L+ + + G D +L+ + M W
Sbjct: 495 SISALRHGKQIHGYILRS-GVFSVTSLGNALITMYAKCGDLDWSLRIFNVMNGR-DIVSW 552
Query: 506 APLLSACMKH 515
++SA +H
Sbjct: 553 NAMISAYAQH 562
>gi|224117876|ref|XP_002317690.1| predicted protein [Populus trichocarpa]
gi|222860755|gb|EEE98302.1| predicted protein [Populus trichocarpa]
Length = 706
Score = 341 bits (874), Expect = 9e-91, Method: Compositional matrix adjust.
Identities = 194/622 (31%), Positives = 334/622 (53%), Gaps = 8/622 (1%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI G + + + M+ + +S TF VL + + G+++H V++ G
Sbjct: 82 MINGYVQCGESDSAIKLFKDMMSSEAKPDSVTFACVLSISCSEAMVEYGRQLHGLVVRSG 141
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
V L+ +YSK +RK+ D MP +V WN +I + + D+A ++
Sbjct: 142 LDFVPLVGNTLVTVYSKGRQLGDARKLFDMMP--QIDLVVWNRMIGGYVQNGFMDDASML 199
Query: 121 LKEMWVLGLELSASTFVS----VVSGCSFRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
EM G++ + TF S + S +Q +H + + G++ ++ L ++++ +Y
Sbjct: 200 FNEMISAGIKPDSITFTSFLPSLAESSSLKQIKEIHGYIVRHGVIL-DVYLNSALIDLYF 258
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K A +F+ + IV +T +I GYV G +A + + + + P+ + F +
Sbjct: 259 KCRDAVMACKMFNLSTKFDIVIYTAMISGYVLNGMNKDALEIFRWLLQKKMIPNALTFSS 318
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
++ CA + + L +H ++K+ + P+ + +++MY KCG L+LA +F + K
Sbjct: 319 ILPACAGLAAIKLGRELHGYIIKNELEEKCPVGSAIMNMYAKCGRLDLAHLIFGRISIKD 378
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEE 356
W S+I ++Q G P EA+ LF+++ V+ + T++ LSACA + +L GKEI
Sbjct: 379 AICWNSIITSFSQDGKPEEAIYLFRQMGMEGVKYDCVTVSAALSACANIPALHYGKEIHG 438
Query: 357 YIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQ 416
+++ ES+ ++LI+M++KCG++N A+ VF + +K+ W+++I Y HG
Sbjct: 439 FMIKGAFESDLFDMSALINMYAKCGKLNIARLVFNLMQEKNEVAWNSIIAAYGYHGYLAD 498
Query: 417 ALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCL 476
+L LF+ M EG++PD + + +ILS+C H+G V+DG+ +F+ M +GI +EHY C+
Sbjct: 499 SLALFHNMLE-EGIQPDHITFLTILSSCGHAGQVEDGVRYFRCMTEEYGIPAQMEHYACM 557
Query: 477 VDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGST 536
DL GRAG D A + I MP A VW LL AC H NVEL E A++ LL L P ++
Sbjct: 558 ADLFGRAGHLDEAFEVITSMPFPPAASVWGTLLGACRVHGNVELAEVASRYLLDLEPKNS 617
Query: 537 GNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSV 596
G Y+L+ ++ AG W+ + LM +R + K PG S +E++ + VF A D SH S
Sbjct: 618 GYYLLLTHVLADAGKWRSVHKIQHLMKERGVQKVPGCSWIEVNNTTCVFFAADGSHPESP 677
Query: 597 DIRKTLKELHIKLLEAGYIAEA 618
I LK L ++L + GY+ +A
Sbjct: 678 QIYSLLKSLLLELRKVGYVPQA 699
Score = 233 bits (593), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 143/500 (28%), Positives = 270/500 (54%), Gaps = 12/500 (2%)
Query: 21 MLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSD 80
ML GV + +TFP V+K C +N++ GK + +L++GF D FV + LI +Y+
Sbjct: 1 MLGCGVFPDKYTFPPVIKCCTGLNNVRLGKVIQDMILEMGFDLDMFVASSLIKLYADNGC 60
Query: 81 FVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVV 140
+R+ D+M + V WN +I+ + + +D AI + K+M + + TF V+
Sbjct: 61 IEDARRFFDKMID--KDCVLWNVMINGYVQCGESDSAIKLFKDMMSSEAKPDSVTFACVL 118
Query: 141 S-GCS---FRQGISMHCCVYKLGLLNNEIPL-ANSVMSMYAKFGKVNEARSIFDEIGETS 195
S CS G +H V + GL + +PL N+++++Y+K ++ +AR +FD + +
Sbjct: 119 SISCSEAMVEYGRQLHGLVVRSGL--DFVPLVGNTLVTVYSKGRQLGDARKLFDMMPQID 176
Query: 196 IVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHS 255
+V W +IGGYV G +++A L N+M + PD + F + + A+ +L +H
Sbjct: 177 LVVWNRMIGGYVQNGFMDDASMLFNEMISAGIKPDSITFTSFLPSLAESSSLKQIKEIHG 236
Query: 256 LLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSE 315
+++ G + L++ L+ +Y KC D +A ++F+ + + ++T+MI GY G +
Sbjct: 237 YIVRHGVILDVYLNSALIDLYFKCRDAVMACKMFNLSTKFDIVIYTAMISGYVLNGMNKD 296
Query: 316 AVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIH 375
A+ +F+ LL+ + PN T ++ L ACA L ++ G+E+ YI+ N LE V +++++
Sbjct: 297 ALEIFRWLLQKKMIPNALTFSSILPACAGLAAIKLGRELHGYIIKNELEEKCPVGSAIMN 356
Query: 376 MFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAV 435
M++KCGR++ A +F R+ KD W+++I ++ G ++A+ LF +M +EG+K D V
Sbjct: 357 MYAKCGRLDLAHLIFGRISIKDAICWNSIITSFSQDGKPEEAIYLFRQMG-MEGVKYDCV 415
Query: 436 VYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHE 495
++ LSAC++ + G M E + L+++ + G+ ++A + +
Sbjct: 416 TVSAALSACANIPALHYGKEIHGFMIKG-AFESDLFDMSALINMYAKCGKLNIA-RLVFN 473
Query: 496 MPVEVQAQVWAPLLSACMKH 515
+ E W +++A H
Sbjct: 474 LMQEKNEVAWNSIIAAYGYH 493
>gi|413918675|gb|AFW58607.1| hypothetical protein ZEAMMB73_481408 [Zea mays]
Length = 694
Score = 340 bits (873), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 179/484 (36%), Positives = 273/484 (56%), Gaps = 2/484 (0%)
Query: 132 SASTFVSVVSGCSFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEI 191
+A S C+ G + K GL+ + L +S++ MYA G V AR +FD
Sbjct: 123 AACALKSCSRMCALDVGRGVQAYAVKRGLVADRFVL-SSLIHMYASCGDVAAARLVFDAA 181
Query: 192 GETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLAL 251
E+ +V W I+ Y+ G+ E + M + V D V ++++ C ++G+ L
Sbjct: 182 EESGVVMWNAIVAAYLKNGDWMEVVEMFKGMLEVGVAFDEVTLVSVVTACGRIGDAKLGK 241
Query: 252 SMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLG 311
+ + + G L L+ MY KCG++ ARR+FD + + V W++MI GY Q
Sbjct: 242 WVAGHVDEEGLARNPKLVTALMDMYAKCGEIGKARRLFDGMQSRDVVAWSAMISGYTQAD 301
Query: 312 YPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQT 371
EA+ LF + V PN+ T+ + LSACA LG+L GK + Y+ L + T
Sbjct: 302 QCREALGLFSEMQLARVEPNDVTMVSVLSACAVLGALETGKWVHSYVRRKRLSLTTILGT 361
Query: 372 SLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLK 431
+L+ ++KCG I+ A E FE +P K+ W+A+I G A +G G +AL LF M+ G++
Sbjct: 362 ALVDFYAKCGCIDDAVEAFESMPVKNSWTWTALIKGMATNGRGREALELFSSMREA-GIE 420
Query: 432 PDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALK 491
P V + +L ACSHS +V++G F SM ++GI+P +EHY C+VDLLGRAG D A +
Sbjct: 421 PTDVTFIGVLMACSHSCLVEEGRRHFDSMARDYGIKPRVEHYGCMVDLLGRAGLVDEAYQ 480
Query: 492 TIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGM 551
I MP+E A +W LLS+C H NV +GE A K +++LNP +G+Y+L++N++ SAG
Sbjct: 481 FIRTMPIEPNAVIWRALLSSCAVHRNVGIGEEALKQIISLNPSHSGDYVLLSNIYASAGQ 540
Query: 552 WKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKELHIKLLE 611
WK+AA R M DR + K PG S +E+DG V F A D H +I + ++E+ ++
Sbjct: 541 WKDAAMVRKEMKDRGIEKTPGCSLIELDGVVFEFFAEDSDHPELREIYQKVEEMIGRIKV 600
Query: 612 AGYI 615
AGY+
Sbjct: 601 AGYV 604
Score = 177 bits (449), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 115/432 (26%), Positives = 216/432 (50%), Gaps = 18/432 (4%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQ--TGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLK 58
++R + G E+ L + ML + + T LK+C+ + ++ G+ V ++ +K
Sbjct: 89 LMRAFLHAGHPEDALHLFIEMLHAASACPADQHTAACALKSCSRMCALDVGRGVQAYAVK 148
Query: 59 VGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAI 118
G D FV + LI MY+ C D ++R V D VV WN+I++A+ + E +
Sbjct: 149 RGLVADRFVLSSLIHMYASCGDVAAARLVFDA--AEESGVVMWNAIVAAYLKNGDWMEVV 206
Query: 119 LVLKEMWVLGLELSASTFVSVVSGC------SFRQGISMHCCVYKLGLLNNEIPLANSVM 172
+ K M +G+ T VSVV+ C + ++ H V + GL N L ++M
Sbjct: 207 EMFKGMLEVGVAFDEVTLVSVVTACGRIGDAKLGKWVAGH--VDEEGLARNP-KLVTALM 263
Query: 173 SMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLV 232
MYAK G++ +AR +FD + +V+W+ +I GY EA GL ++M+ V P+ V
Sbjct: 264 DMYAKCGEIGKARRLFDGMQSRDVVAWSAMISGYTQADQCREALGLFSEMQLARVEPNDV 323
Query: 233 VFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAV 292
++++ CA +G L +HS + + + L LV Y KCG ++ A F+++
Sbjct: 324 TMVSVLSACAVLGALETGKWVHSYVRRKRLSLTTILGTALVDFYAKCGCIDDAVEAFESM 383
Query: 293 LEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGK 352
K+ + WT++I G A G EA+ LF + + + P + T L AC+ + +G+
Sbjct: 384 PVKNSWTWTALIKGMATNGRGREALELFSSMREAGIEPTDVTFIGVLMACSHSCLVEEGR 443
Query: 353 EIEEYIVLN-GLESNRQVQTSLIHMFSKCGRINKAKEVFERVP-DKDLAVWSAMINGYAI 410
+ + + G++ + ++ + + G +++A + +P + + +W A+++ A+
Sbjct: 444 RHFDSMARDYGIKPRVEHYGCMVDLLGRAGLVDEAYQFIRTMPIEPNAVIWRALLSSCAV 503
Query: 411 H---GMGDQALN 419
H G+G++AL
Sbjct: 504 HRNVGIGEEALK 515
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 91/317 (28%), Positives = 161/317 (50%), Gaps = 5/317 (1%)
Query: 195 SIVSWTTIIGGYVNVGNVNEAFGLCNQM-RRMSVTP-DLVVFLNLILGCAQVGNLFLALS 252
S + ++ +++ G+ +A L +M S P D + C+++ L +
Sbjct: 82 STPCYNVLMRAFLHAGHPEDALHLFIEMLHAASACPADQHTAACALKSCSRMCALDVGRG 141
Query: 253 MHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGY 312
+ + +K G + + + L+ MY CGD+ AR VFDA E V +W +++ Y + G
Sbjct: 142 VQAYAVKRGLVADRFVLSSLIHMYASCGDVAAARLVFDAAEESGVVMWNAIVAAYLKNGD 201
Query: 313 PSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTS 372
E V +FK +L+ V +E TL + ++AC +G GK + ++ GL N ++ T+
Sbjct: 202 WMEVVEMFKGMLEVGVAFDEVTLVSVVTACGRIGDAKLGKWVAGHVDEEGLARNPKLVTA 261
Query: 373 LIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKP 432
L+ M++KCG I KA+ +F+ + +D+ WSAMI+GY +AL LF +MQ + ++P
Sbjct: 262 LMDMYAKCGEIGKARRLFDGMQSRDVVAWSAMISGYTQADQCREALGLFSEMQ-LARVEP 320
Query: 433 DAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKT 492
+ V S+LSAC+ G ++ G + S + + LVD + G D A++
Sbjct: 321 NDVTMVSVLSACAVLGALETG-KWVHSYVRRKRLSLTTILGTALVDFYAKCGCIDDAVEA 379
Query: 493 IHEMPVEVQAQVWAPLL 509
MPV+ + W L+
Sbjct: 380 FESMPVK-NSWTWTALI 395
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 103/397 (25%), Positives = 182/397 (45%), Gaps = 43/397 (10%)
Query: 7 NNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAF 66
NG + E + + ML+ GV + T V+ AC I GK V HV + G ++
Sbjct: 198 KNGDWMEVVEMFKGMLEVGVAFDEVTLVSVVTACGRIGDAKLGKWVAGHVDEEGLARNPK 257
Query: 67 VQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWV 126
+ T L+DMY+KC + +R++ D M + R VV+W+++IS +++A EA+ + EM +
Sbjct: 258 LVTALMDMYAKCGEIGKARRLFDGM--QSRDVVAWSAMISGYTQADQCREALGLFSEMQL 315
Query: 127 LGLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVN 182
+E + T VSV+S C + G +H V + L I L +++ YAK G ++
Sbjct: 316 ARVEPNDVTMVSVLSACAVLGALETGKWVHSYVRRKRLSLTTI-LGTALVDFYAKCGCID 374
Query: 183 EARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCA 242
+A F+ + + +WT +I G G EA L + MR + P V F+ +++ C+
Sbjct: 375 DAVEAFESMPVKNSWTWTALIKGMATNGRGREALELFSSMREAGIEPTDVTFIGVLMACS 434
Query: 243 QVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTS 302
HS L++ G + D +AR D ++ V +
Sbjct: 435 -----------HSCLVEEGRRHFD----------------SMAR---DYGIKPRVEHYGC 464
Query: 303 MIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKE-IEEYIVLN 361
M+ + G EA + + + PN LS+CA ++ G+E +++ I LN
Sbjct: 465 MVDLLGRAGLVDEAYQFIRTM---PIEPNAVIWRALLSSCAVHRNVGIGEEALKQIISLN 521
Query: 362 GLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDL 398
S V S ++++ G+ A V + + D+ +
Sbjct: 522 PSHSGDYVLLS--NIYASAGQWKDAAMVRKEMKDRGI 556
>gi|108712052|gb|ABF99847.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 1221
Score = 340 bits (873), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 189/602 (31%), Positives = 334/602 (55%), Gaps = 9/602 (1%)
Query: 6 TNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDA 65
T NG E L+ ++ M+++GV N F L ACA++ ++ G++VHS ++ GF DA
Sbjct: 17 TRNGRPEAALAMFADMVESGVAPNDFACNAALVACADLGALRAGEQVHSLAVRAGFAGDA 76
Query: 66 FVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMW 125
++ + LI+MYS+C ++++V D M VV + S+ISA R + A L +M
Sbjct: 77 WIGSCLIEMYSRCGSLPAAKEVFDRMDSP--DVVGYTSLISAFCRNGEFELAAEALIQML 134
Query: 126 VLGLELSASTFVSVVSGCSFRQGISMH-CCVYKLGLLNNEIPLANSVMSMYAKFGKVNEA 184
GL+ + T ++++ C G +H + K+GL + + + +++ Y++ G+ A
Sbjct: 135 KQGLKPNEHTMTTILTACPRVLGQQIHGYLIKKIGLRSQSVYSSTALIDFYSRNGEFKLA 194
Query: 185 RSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILG-CAQ 243
+++FD + ++VSW +++ Y+ G + EA + M V P+ L+++LG C
Sbjct: 195 KAVFDSLHCKNVVSWCSMMQLYIRDGRLEEALQVFGDMISEGVDPNEFA-LSIVLGACGS 253
Query: 244 VGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSM 303
+G L +H +K + + N L+SMY + G +E + + + + WT+
Sbjct: 254 IG---LGRQLHCSAIKHDLITDIRVSNALLSMYGRTGLVEELEAMLNKIENPDLVSWTTA 310
Query: 304 IGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGL 363
I Q G+ +A+ L ++ PN ++ LS+CA++ SL +G + + G
Sbjct: 311 ISANFQNGFGEKAIALLCQMHSEGFTPNGYAFSSVLSSCADVASLDQGMQFHCLALKLGC 370
Query: 364 ESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYK 423
+S +LI+M+SKCG++ A+ F+ + D+ W+++I+G+A HG ++AL +F K
Sbjct: 371 DSEICTGNALINMYSKCGQMGSARLAFDVMHTHDVTSWNSLIHGHAQHGDANKALEVFSK 430
Query: 424 MQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRA 483
M+ G+KPD + +L C+HSGMV++G FF+ M + P+ HY C++D+LGR
Sbjct: 431 MRS-NGIKPDDSTFLGVLMGCNHSGMVEEGELFFRLMIDQYSFTPAPSHYACMIDMLGRN 489
Query: 484 GRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMA 543
GRFD AL+ I++MP E A +W LL++C H N+++G+ AA L+ L+ + +Y+LM+
Sbjct: 490 GRFDEALRMINDMPFEPDALIWKTLLASCKLHRNLDIGKLAADRLMELSDRDSASYVLMS 549
Query: 544 NLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLK 603
N++ G W++A R MD+ + K+ G S +EI+ V F + D SH S I + L
Sbjct: 550 NIYAMHGEWEDARKVRRRMDETGVKKDAGCSWIEINNEVHTFASRDMSHPNSDSIYQMLG 609
Query: 604 EL 605
EL
Sbjct: 610 EL 611
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 85/315 (26%), Positives = 150/315 (47%), Gaps = 20/315 (6%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
M++ +G EE L + M+ GV N F +VL AC +I G+++H +K
Sbjct: 212 MMQLYIRDGRLEEALQVFGDMISEGVDPNEFALSIVLGACGSIGL---GRQLHCSAIKHD 268
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
D V L+ MY + +L++ + +VSW + ISA+ + ++AI +
Sbjct: 269 LITDIRVSNALLSMYGRTGLVEELEAMLNK--IENPDLVSWTTAISANFQNGFGEKAIAL 326
Query: 121 LKEMWVLGLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
L +M G + F SV+S C S QG+ HC KLG ++EI N++++MY+
Sbjct: 327 LCQMHSEGFTPNGYAFSSVLSSCADVASLDQGMQFHCLALKLG-CDSEICTGNALINMYS 385
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K G++ AR FD + + SW ++I G+ G+ N+A + ++MR + PD FL
Sbjct: 386 KCGQMGSARLAFDVMHTHDVTSWNSLIHGHAQHGDANKALEVFSKMRSNGIKPDDSTFLG 445
Query: 237 LILGC-----AQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELA-RRVFD 290
+++GC + G LF L ++ + + ++ M + G + A R + D
Sbjct: 446 VLMGCNHSGMVEEGELFFRL----MIDQYSFTPAPSHYACMIDMLGRNGRFDEALRMIND 501
Query: 291 AVLEKSVFLWTSMIG 305
E +W +++
Sbjct: 502 MPFEPDALIWKTLLA 516
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 75/257 (29%), Positives = 131/257 (50%), Gaps = 7/257 (2%)
Query: 195 SIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMH 254
++V+WT+++ GY G A + M V P+ ++ CA +G L +H
Sbjct: 5 NVVAWTSVMSGYTRNGRPEAALAMFADMVESGVAPNDFACNAALVACADLGALRAGEQVH 64
Query: 255 SLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPS 314
SL +++G+ + + + L+ MY++CG L A+ VFD + V +TS+I + + G
Sbjct: 65 SLAVRAGFAGDAWIGSCLIEMYSRCGSLPAAKEVFDRMDSPDVVGYTSLISAFCRNGEFE 124
Query: 315 EAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLN-GLESNR-QVQTS 372
A ++LK ++PNE T+ T L+AC + G++I Y++ GL S T+
Sbjct: 125 LAAEALIQMLKQGLKPNEHTMTTILTACPRV----LGQQIHGYLIKKIGLRSQSVYSSTA 180
Query: 373 LIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKP 432
LI +S+ G AK VF+ + K++ W +M+ Y G ++AL +F M EG+ P
Sbjct: 181 LIDFYSRNGEFKLAKAVFDSLHCKNVVSWCSMMQLYIRDGRLEEALQVFGDMIS-EGVDP 239
Query: 433 DAVVYTSILSACSHSGM 449
+ + +L AC G+
Sbjct: 240 NEFALSIVLGACGSIGL 256
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 102/197 (51%), Gaps = 6/197 (3%)
Query: 294 EKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKE 353
K+V WTS++ GY + G P A+ +F ++++ V PN+ L ACA+LG+L G++
Sbjct: 3 RKNVVAWTSVMSGYTRNGRPEAALAMFADMVESGVAPNDFACNAALVACADLGALRAGEQ 62
Query: 354 IEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGM 413
+ V G + + + LI M+S+CG + AKEVF+R+ D+ ++++I+ + +G
Sbjct: 63 VHSLAVRAGFAGDAWIGSCLIEMYSRCGSLPAAKEVFDRMDSPDVVGYTSLISAFCRNGE 122
Query: 414 GDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEP-SIEH 472
+ A +M +GLKP+ T+IL+AC G + G+ S+
Sbjct: 123 FELAAEALIQMLK-QGLKPNEHTMTTILTACPRVL----GQQIHGYLIKKIGLRSQSVYS 177
Query: 473 YLCLVDLLGRAGRFDLA 489
L+D R G F LA
Sbjct: 178 STALIDFYSRNGEFKLA 194
>gi|359497772|ref|XP_003635637.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like, partial [Vitis vinifera]
Length = 629
Score = 340 bits (873), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 191/544 (35%), Positives = 308/544 (56%), Gaps = 12/544 (2%)
Query: 86 KVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCS- 144
KV D+MP R ++V+W +I+ ++ +AI + +M + G T+ SV+S C+
Sbjct: 6 KVFDKMPER--NLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTE 63
Query: 145 ---FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKF---GKVNEARSIFDEIGETSIVS 198
G +H V +LGL + + + S++ MYAK G V+++R +F+++ E +++S
Sbjct: 64 LGLLALGKQLHSRVIRLGLALD-VCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMS 122
Query: 199 WTTIIGGYVNVGNVN-EAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLL 257
WT II Y G + EA L +M + P+ F +++ C + + + ++S
Sbjct: 123 WTAIITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYA 182
Query: 258 LKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAV 317
+K G + + + N L+SMY + G +E AR+ FD + EK++ + +++ GYA+ EA
Sbjct: 183 VKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAF 242
Query: 318 NLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMF 377
LF + T + + T A+ LS A +G++ KG++I ++ G +SN+ + +LI M+
Sbjct: 243 LLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMY 302
Query: 378 SKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVY 437
S+CG I A +VF + D+++ W++MI G+A HG +AL +F+KM G KP+ + Y
Sbjct: 303 SRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLET-GTKPNEITY 361
Query: 438 TSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMP 497
++LSACSH GM+ +G F SM GI P +EHY C+VDLLGR+G A++ I+ MP
Sbjct: 362 VAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMP 421
Query: 498 VEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAAT 557
+ A VW LL AC H N ELG +AA+ +L P YIL++NL SAG WK+
Sbjct: 422 LMADALVWRTLLGACRVHGNTELGRHAAEMILEQEPDDPAAYILLSNLHASAGQWKDVVK 481
Query: 558 ARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKELHIKLLEAGYIAE 617
R M +R L KE G S +E++ V F G+ SH + I + L +L K+ E GYI +
Sbjct: 482 IRKSMKERNLIKEAGCSWIEVENRVHRFHVGETSHPQAWQIYQELDQLASKIKEMGYIPD 541
Query: 618 ADIV 621
D V
Sbjct: 542 TDFV 545
Score = 211 bits (536), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 142/474 (29%), Positives = 245/474 (51%), Gaps = 21/474 (4%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI G + + + M +G + FT+ VL AC + + GK++HS V+++G
Sbjct: 22 MITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGLLALGKQLHSRVIRLG 81
Query: 61 FQQDAFVQTGLIDMYSKCS---DFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLND-E 116
D V L+DMY+KC+ SRKV ++MP +V+SW +II+A++++ D E
Sbjct: 82 LALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPE--HNVMSWTAIITAYAQSGECDKE 139
Query: 117 AILVLKEMWVLGLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVM 172
AI + +M + + +F SV+ C G ++ KLG+ + + NS++
Sbjct: 140 AIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASVNC-VGNSLI 198
Query: 173 SMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLV 232
SMYA+ G++ +AR FD + E ++VS+ I+ GY EAF L N++ +
Sbjct: 199 SMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAF 258
Query: 233 VFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAV 292
F +L+ G A +G + +H LLK GY + + N L+SMY++CG++E A +VF+ +
Sbjct: 259 TFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEM 318
Query: 293 LEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKG- 351
+++V WTSMI G+A+ G+ + A+ +F ++L+T +PNE T LSAC+ +G +S+G
Sbjct: 319 EDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQ 378
Query: 352 KEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVP-DKDLAVWSAMINGYAI 410
K +G+ + ++ + + G + +A E +P D VW ++ +
Sbjct: 379 KHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADALVWRTLLGACRV 438
Query: 411 HG---MGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQ 461
HG +G A + + E P A + S L A +G D + KSM+
Sbjct: 439 HGNTELGRHAAEMILEQ---EPDDPAAYILLSNLHA--SAGQWKDVVKIRKSMK 487
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 91/337 (27%), Positives = 173/337 (51%), Gaps = 9/337 (2%)
Query: 184 ARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQ 243
A +FD++ E ++V+WT +I + +G +A L M PD + +++ C +
Sbjct: 4 AYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTE 63
Query: 244 VGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKC---GDLELARRVFDAVLEKSVFLW 300
+G L L +HS +++ G + + LV MY KC G ++ +R+VF+ + E +V W
Sbjct: 64 LGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSW 123
Query: 301 TSMIGGYAQLGY-PSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIV 359
T++I YAQ G EA+ LF +++ +RPN + ++ L AC L G+++ Y V
Sbjct: 124 TAIITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAV 183
Query: 360 LNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALN 419
G+ S V SLI M+++ GR+ A++ F+ + +K+L ++A+++GYA + ++A
Sbjct: 184 KLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFL 243
Query: 420 LFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFF-KSMQSNFGIEPSIEHYLCLVD 478
LF ++ G+ A + S+LS + G + G + ++ + I + L+
Sbjct: 244 LFNEIADT-GIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICN--ALIS 300
Query: 479 LLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKH 515
+ R G + A + +EM + W +++ KH
Sbjct: 301 MYSRCGNIEAAFQVFNEME-DRNVISWTSMITGFAKH 336
>gi|302797174|ref|XP_002980348.1| hypothetical protein SELMODRAFT_112174 [Selaginella moellendorffii]
gi|300151964|gb|EFJ18608.1| hypothetical protein SELMODRAFT_112174 [Selaginella moellendorffii]
Length = 801
Score = 340 bits (873), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 203/641 (31%), Positives = 337/641 (52%), Gaps = 25/641 (3%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHG-NSFTFPLVLKAC--ANINSIWDGKRVHSHVL 57
MI NGS E L + M G NS TF VL +C A + S+ D + +H ++
Sbjct: 82 MISAFLRNGSAREALQLFRDMDHDGAPPPNSVTFVSVLDSCVEAGLLSLEDVRAIHGRIV 141
Query: 58 KVGFQQDAFVQTGLIDMYSKCSDFVSSRKVL----DEMPVRLRSVVSWNSIISAHSRACL 113
G +++AFV+T L+D Y K + +V DE P S+V+ +++ISA +
Sbjct: 142 GAGIEREAFVRTALVDSYGKLGSLDDAWEVFLRKSDEEPST--SLVTCSAMISACWQNGW 199
Query: 114 NDEAILVLKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGL----LNNEIPLAN 169
E++ + M + G + S T VSV++ CS S V + + + L
Sbjct: 200 PQESLRLFYAMNLEGTKPSGVTLVSVLNACSMLPVGSATAFVLEQAMEVVSATRDNVLGT 259
Query: 170 SVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTP 229
++++ YA+ ++ AR+ FD I +VSW + Y+ EA L +M V P
Sbjct: 260 TLLTTYARSNDLSRARATFDAIQSPDVVSWNAMAAAYLQHHRPREALVLFERMLLEGVRP 319
Query: 230 DLVVFLNLILGCA----QVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELA 285
+ F+ + CA Q + + + SLL ++G + + N ++MY KCG L A
Sbjct: 320 SVATFITALTACAAYPPQTASA-IGKRIQSLLEEAGLEGDTAVANATLNMYAKCGSLADA 378
Query: 286 RRVFDAV--LEKSVFLWTSMIGGYAQLGYPSEAVNLFKRL-LKTSVRPNEATLATTLSAC 342
R VF+ + + W SM+ Y G EA LF+ + + V+PN+ T L A
Sbjct: 379 RAVFERISPTRRDCITWNSMLAAYGHHGLGKEAFELFQAMEAEKLVKPNKVTFVAVLDAS 438
Query: 343 AELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVP--DKDLAV 400
S+++G+EI +V NG ES+ +Q +L++M++KCG ++ A+ +F++ +D+
Sbjct: 439 TSRTSIAQGREIHARVVSNGFESDTVIQNALLNMYAKCGSLDDAQAIFDKSSSNQEDVIA 498
Query: 401 WSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSM 460
W++++ GYA +G ++AL LF+ MQ +G++P+ + + S L+AC+H G ++ G M
Sbjct: 499 WTSLVAGYAQYGQAERALKLFWTMQQ-QGVRPNHITFISALTACNHGGKLEQGCELLSGM 557
Query: 461 QSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVEL 520
+ GI P+ +H+ C+VDLLGR GR D A K + E + W LL AC +E
Sbjct: 558 TPDHGIVPASKHFSCIVDLLGRCGRLDEAEKLL-ERTSQADVITWMALLDACKNSKELER 616
Query: 521 GEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDG 580
GE A+ ++ L+P +YI++A+++ +AG W EAAT R M D+ + +PG S VE++
Sbjct: 617 GERCAERIMQLDPEVASSYIVLASMYAAAGRWNEAATIRKTMLDKGIRADPGCSAVEVNQ 676
Query: 581 SVQVFVAGDRSHHLSVDIRKTLKELHIKLLEAGYIAEADIV 621
+ F AGD+SH S +I L+ LH + AGY+A+ +V
Sbjct: 677 ELHSFSAGDKSHPKSEEIYLELERLHWSIKAAGYVADTGLV 717
Score = 199 bits (506), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 142/515 (27%), Positives = 244/515 (47%), Gaps = 25/515 (4%)
Query: 26 VHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSR 85
V N ++ AC+ + ++ G+R+HS + F++++ + LI MYSKC + ++
Sbjct: 3 VRPNCHALIALVNACSCLGNLAAGRRIHSQISDRDFEENSVLGNALISMYSKCGSLIDAK 62
Query: 86 KVLDEMP-VRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSAS-TFVSVVSGC 143
+ D +P R VV+WN++ISA R EA+ + ++M G S TFVSV+ C
Sbjct: 63 QAFDRLPRASKRDVVTWNAMISAFLRNGSAREALQLFRDMDHDGAPPPNSVTFVSVLDSC 122
Query: 144 ------SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIF----DEIGE 193
S ++H + G + E + +++ Y K G +++A +F DE
Sbjct: 123 VEAGLLSLEDVRAIHGRIVGAG-IEREAFVRTALVDSYGKLGSLDDAWEVFLRKSDEEPS 181
Query: 194 TSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCA--QVGNLFLAL 251
TS+V+ + +I G E+ L M P V ++++ C+ VG+ A
Sbjct: 182 TSLVTCSAMISACWQNGWPQESLRLFYAMNLEGTKPSGVTLVSVLNACSMLPVGSA-TAF 240
Query: 252 SMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLG 311
+ + ++ L L++ Y + DL AR FDA+ V W +M Y Q
Sbjct: 241 VLEQAMEVVSATRDNVLGTTLLTTYARSNDLSRARATFDAIQSPDVVSWNAMAAAYLQHH 300
Query: 312 YPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSK---GKEIEEYIVLNGLESNRQ 368
P EA+ LF+R+L VRP+ AT T L+ACA + GK I+ + GLE +
Sbjct: 301 RPREALVLFERMLLEGVRPSVATFITALTACAAYPPQTASAIGKRIQSLLEEAGLEGDTA 360
Query: 369 VQTSLIHMFSKCGRINKAKEVFERVPD--KDLAVWSAMINGYAIHGMGDQALNLFYKMQH 426
V + ++M++KCG + A+ VFER+ +D W++M+ Y HG+G +A LF M+
Sbjct: 361 VANATLNMYAKCGSLADARAVFERISPTRRDCITWNSMLAAYGHHGLGKEAFELFQAMEA 420
Query: 427 VEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRF 486
+ +KP+ V + ++L A + + G + SN G E L+++ + G
Sbjct: 421 EKLVKPNKVTFVAVLDASTSRTSIAQGREIHARVVSN-GFESDTVIQNALLNMYAKCGSL 479
Query: 487 DLALKTIHEMPVEVQAQV--WAPLLSACMKHHNVE 519
D A + I + Q V W L++ ++ E
Sbjct: 480 DDA-QAIFDKSSSNQEDVIAWTSLVAGYAQYGQAE 513
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 78/231 (33%), Positives = 119/231 (51%), Gaps = 11/231 (4%)
Query: 225 MSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLEL 284
M V P+ + L+ C+ +GNL +HS + + L N L+SMY+KCG L
Sbjct: 1 MEVRPNCHALIALVNACSCLGNLAAGRRIHSQISDRDFEENSVLGNALISMYSKCGSLID 60
Query: 285 ARRVFDAVL---EKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSV-RPNEATLATTLS 340
A++ FD + ++ V W +MI + + G EA+ LF+ + PN T + L
Sbjct: 61 AKQAFDRLPRASKRDVVTWNAMISAFLRNGSAREALQLFRDMDHDGAPPPNSVTFVSVLD 120
Query: 341 ACAELG--SLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKD- 397
+C E G SL + I IV G+E V+T+L+ + K G ++ A EVF R D++
Sbjct: 121 SCVEAGLLSLEDVRAIHGRIVGAGIEREAFVRTALVDSYGKLGSLDDAWEVFLRKSDEEP 180
Query: 398 ---LAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACS 445
L SAMI+ +G ++L LFY M ++EG KP V S+L+ACS
Sbjct: 181 STSLVTCSAMISACWQNGWPQESLRLFYAM-NLEGTKPSGVTLVSVLNACS 230
>gi|296090723|emb|CBI41122.3| unnamed protein product [Vitis vinifera]
Length = 634
Score = 340 bits (873), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 191/544 (35%), Positives = 308/544 (56%), Gaps = 12/544 (2%)
Query: 86 KVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCS- 144
KV D+MP R ++V+W +I+ ++ +AI + +M + G T+ SV+S C+
Sbjct: 11 KVFDKMPER--NLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTE 68
Query: 145 ---FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKF---GKVNEARSIFDEIGETSIVS 198
G +H V +LGL + + + S++ MYAK G V+++R +F+++ E +++S
Sbjct: 69 LGLLALGKQLHSRVIRLGLALD-VCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMS 127
Query: 199 WTTIIGGYVNVGNVN-EAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLL 257
WT II Y G + EA L +M + P+ F +++ C + + + ++S
Sbjct: 128 WTAIITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYA 187
Query: 258 LKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAV 317
+K G + + + N L+SMY + G +E AR+ FD + EK++ + +++ GYA+ EA
Sbjct: 188 VKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAF 247
Query: 318 NLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMF 377
LF + T + + T A+ LS A +G++ KG++I ++ G +SN+ + +LI M+
Sbjct: 248 LLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMY 307
Query: 378 SKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVY 437
S+CG I A +VF + D+++ W++MI G+A HG +AL +F+KM G KP+ + Y
Sbjct: 308 SRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLET-GTKPNEITY 366
Query: 438 TSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMP 497
++LSACSH GM+ +G F SM GI P +EHY C+VDLLGR+G A++ I+ MP
Sbjct: 367 VAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMP 426
Query: 498 VEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAAT 557
+ A VW LL AC H N ELG +AA+ +L P YIL++NL SAG WK+
Sbjct: 427 LMADALVWRTLLGACRVHGNTELGRHAAEMILEQEPDDPAAYILLSNLHASAGQWKDVVK 486
Query: 558 ARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKELHIKLLEAGYIAE 617
R M +R L KE G S +E++ V F G+ SH + I + L +L K+ E GYI +
Sbjct: 487 IRKSMKERNLIKEAGCSWIEVENRVHRFHVGETSHPQAWQIYQELDQLASKIKEMGYIPD 546
Query: 618 ADIV 621
D V
Sbjct: 547 TDFV 550
Score = 211 bits (536), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 140/471 (29%), Positives = 243/471 (51%), Gaps = 15/471 (3%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI G + + + M +G + FT+ VL AC + + GK++HS V+++G
Sbjct: 27 MITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGLLALGKQLHSRVIRLG 86
Query: 61 FQQDAFVQTGLIDMYSKCS---DFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLND-E 116
D V L+DMY+KC+ SRKV ++MP +V+SW +II+A++++ D E
Sbjct: 87 LALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPE--HNVMSWTAIITAYAQSGECDKE 144
Query: 117 AILVLKEMWVLGLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVM 172
AI + +M + + +F SV+ C G ++ KLG+ + + NS++
Sbjct: 145 AIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASVNC-VGNSLI 203
Query: 173 SMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLV 232
SMYA+ G++ +AR FD + E ++VS+ I+ GY EAF L N++ +
Sbjct: 204 SMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAF 263
Query: 233 VFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAV 292
F +L+ G A +G + +H LLK GY + + N L+SMY++CG++E A +VF+ +
Sbjct: 264 TFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEM 323
Query: 293 LEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKG- 351
+++V WTSMI G+A+ G+ + A+ +F ++L+T +PNE T LSAC+ +G +S+G
Sbjct: 324 EDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQ 383
Query: 352 KEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVP-DKDLAVWSAMINGYAI 410
K +G+ + ++ + + G + +A E +P D VW ++ +
Sbjct: 384 KHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADALVWRTLLGACRV 443
Query: 411 HGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQ 461
HG + + + E P A + S L A +G D + KSM+
Sbjct: 444 HGNTELGRHAAEMILEQEPDDPAAYILLSNLHA--SAGQWKDVVKIRKSMK 492
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 91/337 (27%), Positives = 173/337 (51%), Gaps = 9/337 (2%)
Query: 184 ARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQ 243
A +FD++ E ++V+WT +I + +G +A L M PD + +++ C +
Sbjct: 9 AYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTE 68
Query: 244 VGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKC---GDLELARRVFDAVLEKSVFLW 300
+G L L +HS +++ G + + LV MY KC G ++ +R+VF+ + E +V W
Sbjct: 69 LGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSW 128
Query: 301 TSMIGGYAQLGY-PSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIV 359
T++I YAQ G EA+ LF +++ +RPN + ++ L AC L G+++ Y V
Sbjct: 129 TAIITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAV 188
Query: 360 LNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALN 419
G+ S V SLI M+++ GR+ A++ F+ + +K+L ++A+++GYA + ++A
Sbjct: 189 KLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFL 248
Query: 420 LFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFF-KSMQSNFGIEPSIEHYLCLVD 478
LF ++ G+ A + S+LS + G + G + ++ + I + L+
Sbjct: 249 LFNEIADT-GIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICN--ALIS 305
Query: 479 LLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKH 515
+ R G + A + +EM + W +++ KH
Sbjct: 306 MYSRCGNIEAAFQVFNEME-DRNVISWTSMITGFAKH 341
>gi|222626149|gb|EEE60281.1| hypothetical protein OsJ_13335 [Oryza sativa Japonica Group]
Length = 1135
Score = 340 bits (873), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 189/602 (31%), Positives = 334/602 (55%), Gaps = 9/602 (1%)
Query: 6 TNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDA 65
T NG E L+ ++ M+++GV N F L ACA++ ++ G++VHS ++ GF DA
Sbjct: 90 TRNGRPEAALAMFADMVESGVAPNDFACNAALVACADLGALRAGEQVHSLAVRAGFAGDA 149
Query: 66 FVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMW 125
++ + LI+MYS+C ++++V D M VV + S+ISA R + A L +M
Sbjct: 150 WIGSCLIEMYSRCGSLPAAKEVFDRMDSP--DVVGYTSLISAFCRNGEFELAAEALIQML 207
Query: 126 VLGLELSASTFVSVVSGCSFRQGISMH-CCVYKLGLLNNEIPLANSVMSMYAKFGKVNEA 184
GL+ + T ++++ C G +H + K+GL + + + +++ Y++ G+ A
Sbjct: 208 KQGLKPNEHTMTTILTACPRVLGQQIHGYLIKKIGLRSQSVYSSTALIDFYSRNGEFKLA 267
Query: 185 RSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILG-CAQ 243
+++FD + ++VSW +++ Y+ G + EA + M V P+ L+++LG C
Sbjct: 268 KAVFDSLHCKNVVSWCSMMQLYIRDGRLEEALQVFGDMISEGVDPNEFA-LSIVLGACGS 326
Query: 244 VGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSM 303
+G L +H +K + + N L+SMY + G +E + + + + WT+
Sbjct: 327 IG---LGRQLHCSAIKHDLITDIRVSNALLSMYGRTGLVEELEAMLNKIENPDLVSWTTA 383
Query: 304 IGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGL 363
I Q G+ +A+ L ++ PN ++ LS+CA++ SL +G + + G
Sbjct: 384 ISANFQNGFGEKAIALLCQMHSEGFTPNGYAFSSVLSSCADVASLDQGMQFHCLALKLGC 443
Query: 364 ESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYK 423
+S +LI+M+SKCG++ A+ F+ + D+ W+++I+G+A HG ++AL +F K
Sbjct: 444 DSEICTGNALINMYSKCGQMGSARLAFDVMHTHDVTSWNSLIHGHAQHGDANKALEVFSK 503
Query: 424 MQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRA 483
M+ G+KPD + +L C+HSGMV++G FF+ M + P+ HY C++D+LGR
Sbjct: 504 MRS-NGIKPDDSTFLGVLMGCNHSGMVEEGELFFRLMIDQYSFTPAPSHYACMIDMLGRN 562
Query: 484 GRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMA 543
GRFD AL+ I++MP E A +W LL++C H N+++G+ AA L+ L+ + +Y+LM+
Sbjct: 563 GRFDEALRMINDMPFEPDALIWKTLLASCKLHRNLDIGKLAADRLMELSDRDSASYVLMS 622
Query: 544 NLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLK 603
N++ G W++A R MD+ + K+ G S +EI+ V F + D SH S I + L
Sbjct: 623 NIYAMHGEWEDARKVRRRMDETGVKKDAGCSWIEINNEVHTFASRDMSHPNSDSIYQMLG 682
Query: 604 EL 605
EL
Sbjct: 683 EL 684
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 80/275 (29%), Positives = 141/275 (51%), Gaps = 7/275 (2%)
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K G++ +A +FD + ++V+WT+++ GY G A + M V P+
Sbjct: 60 KSGRLADALDLFDRMPRKNVVAWTSVMSGYTRNGRPEAALAMFADMVESGVAPNDFACNA 119
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
++ CA +G L +HSL +++G+ + + + L+ MY++CG L A+ VFD +
Sbjct: 120 ALVACADLGALRAGEQVHSLAVRAGFAGDAWIGSCLIEMYSRCGSLPAAKEVFDRMDSPD 179
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEE 356
V +TS+I + + G A ++LK ++PNE T+ T L+AC + G++I
Sbjct: 180 VVGYTSLISAFCRNGEFELAAEALIQMLKQGLKPNEHTMTTILTACPRV----LGQQIHG 235
Query: 357 YIVLN-GLESNR-QVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMG 414
Y++ GL S T+LI +S+ G AK VF+ + K++ W +M+ Y G
Sbjct: 236 YLIKKIGLRSQSVYSSTALIDFYSRNGEFKLAKAVFDSLHCKNVVSWCSMMQLYIRDGRL 295
Query: 415 DQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGM 449
++AL +F M EG+ P+ + +L AC G+
Sbjct: 296 EEALQVFGDMIS-EGVDPNEFALSIVLGACGSIGL 329
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 85/315 (26%), Positives = 150/315 (47%), Gaps = 20/315 (6%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
M++ +G EE L + M+ GV N F +VL AC +I G+++H +K
Sbjct: 285 MMQLYIRDGRLEEALQVFGDMISEGVDPNEFALSIVLGACGSIGL---GRQLHCSAIKHD 341
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
D V L+ MY + +L++ + +VSW + ISA+ + ++AI +
Sbjct: 342 LITDIRVSNALLSMYGRTGLVEELEAMLNK--IENPDLVSWTTAISANFQNGFGEKAIAL 399
Query: 121 LKEMWVLGLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
L +M G + F SV+S C S QG+ HC KLG ++EI N++++MY+
Sbjct: 400 LCQMHSEGFTPNGYAFSSVLSSCADVASLDQGMQFHCLALKLG-CDSEICTGNALINMYS 458
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K G++ AR FD + + SW ++I G+ G+ N+A + ++MR + PD FL
Sbjct: 459 KCGQMGSARLAFDVMHTHDVTSWNSLIHGHAQHGDANKALEVFSKMRSNGIKPDDSTFLG 518
Query: 237 LILGC-----AQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELA-RRVFD 290
+++GC + G LF L ++ + + ++ M + G + A R + D
Sbjct: 519 VLMGCNHSGMVEEGELFFRL----MIDQYSFTPAPSHYACMIDMLGRNGRFDEALRMIND 574
Query: 291 AVLEKSVFLWTSMIG 305
E +W +++
Sbjct: 575 MPFEPDALIWKTLLA 589
>gi|18409250|ref|NP_564961.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75168871|sp|Q9C507.1|PP111_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g69350, mitochondrial; Flags: Precursor
gi|12325094|gb|AAG52503.1|AC018364_21 hypothetical protein; 27026-24663 [Arabidopsis thaliana]
gi|12597785|gb|AAG60097.1|AC073178_8 PPR-repeat protein, putative [Arabidopsis thaliana]
gi|332196793|gb|AEE34914.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 787
Score = 340 bits (872), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 192/610 (31%), Positives = 334/610 (54%), Gaps = 10/610 (1%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
++ + NG + L + M+ GV ++ T V++ CA + + + VH + +
Sbjct: 173 LVSSCLENGEVVKALRMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQITRKM 232
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F D + L+ MYSKC D +SS ++ ++ + ++ VSW ++IS+++R +++A+
Sbjct: 233 FDLDETLCNSLLTMYSKCGDLLSSERIFEK--IAKKNAVSWTAMISSYNRGEFSEKALRS 290
Query: 121 LKEMWVLGLELSASTFVSVVSGCSF----RQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
EM G+E + T SV+S C R+G S+H + L N L+ +++ +YA
Sbjct: 291 FSEMIKSGIEPNLVTLYSVLSSCGLIGLIREGKSVHGFAVRRELDPNYESLSLALVELYA 350
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
+ GK+++ ++ + + +IV+W ++I Y + G V +A GL QM + PD +
Sbjct: 351 ECGKLSDCETVLRVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLAS 410
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
I C G + L +H ++++ ++E + N L+ MY+K G ++ A VF+ + +S
Sbjct: 411 SISACENAGLVPLGKQIHGHVIRTDVSDE-FVQNSLIDMYSKSGSVDSASTVFNQIKHRS 469
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEE 356
V W SM+ G++Q G EA++LF + + + NE T + AC+ +GSL KGK +
Sbjct: 470 VVTWNSMLCGFSQNGNSVEAISLFDYMYHSYLEMNEVTFLAVIQACSSIGSLEKGKWVHH 529
Query: 357 YIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQ 416
++++GL+ + T+LI M++KCG +N A+ VF + + + WS+MIN Y +HG
Sbjct: 530 KLIISGLK-DLFTDTALIDMYAKCGDLNAAETVFRAMSSRSIVSWSSMINAYGMHGRIGS 588
Query: 417 ALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCL 476
A++ F +M G KP+ VV+ ++LSAC HSG V++G +F M+S FG+ P+ EH+ C
Sbjct: 589 AISTFNQMVE-SGTKPNEVVFMNVLSACGHSGSVEEGKYYFNLMKS-FGVSPNSEHFACF 646
Query: 477 VDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGST 536
+DLL R+G A +TI EMP A VW L++ C H +++ + +L + T
Sbjct: 647 IDLLSRSGDLKEAYRTIKEMPFLADASVWGSLVNGCRIHQKMDIIKAIKNDLSDIVTDDT 706
Query: 537 GNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSV 596
G Y L++N++ G W+E R M L K PG+S +EID V F AG+ + +
Sbjct: 707 GYYTLLSNIYAEEGEWEEFRRLRSAMKSSNLKKVPGYSAIEIDQKVFRFGAGEENRIQTD 766
Query: 597 DIRKTLKELH 606
+I + L L
Sbjct: 767 EIYRFLGNLQ 776
Score = 220 bits (561), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 177/645 (27%), Positives = 321/645 (49%), Gaps = 82/645 (12%)
Query: 11 FEETLSTYSSMLQTGVHGNSFTFPLVLKACANINS-IWDGKRVHSHVLKVGFQQDAFVQT 69
+ + Y ++ + F FP VL+ACA + G +VH ++K G DA ++T
Sbjct: 81 LDAAIDLYHRLVSETTQISKFVFPSVLRACAGSREHLSVGGKVHGRIIKGGVDDDAVIET 140
Query: 70 GLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLND----EAILVLKEMW 125
L+ MY + + + KV D MPV R +V+W++++S +CL + +A+ + K M
Sbjct: 141 SLLCMYGQTGNLSDAEKVFDGMPV--RDLVAWSTLVS----SCLENGEVVKALRMFKCMV 194
Query: 126 VLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKV 181
G+E A T +SVV GC+ R S+H + + + + + L NS+++MY+K G +
Sbjct: 195 DDGVEPDAVTMISVVEGCAELGCLRIARSVHGQITR-KMFDLDETLCNSLLTMYSKCGDL 253
Query: 182 NEARSIFDEIGETSIVSWTTIIGGYVNVGNVNE-AFGLCNQMRRMSVTPDLVVFLNLILG 240
+ IF++I + + VSWT +I Y N G +E A ++M + + P+LV +++
Sbjct: 254 LSSERIFEKIAKKNAVSWTAMISSY-NRGEFSEKALRSFSEMIKSGIEPNLVTLYSVLSS 312
Query: 241 CAQVGNLFLALSMHSLLLKSGYN-NEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFL 299
C +G + S+H ++ + N + L LV +Y +CG L V V ++++
Sbjct: 313 CGLIGLIREGKSVHGFAVRRELDPNYESLSLALVELYAECGKLSDCETVLRVVSDRNIVA 372
Query: 300 WTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIV 359
W S+I YA G +A+ LF++++ ++P+ TLA+++SAC G + GK+I +++
Sbjct: 373 WNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISACENAGLVPLGKQIHGHVI 432
Query: 360 LNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALN 419
+ S+ VQ SLI M+SK G ++ A VF ++ + + W++M+ G++ +G +A++
Sbjct: 433 RTDV-SDEFVQNSLIDMYSKSGSVDSASTVFNQIKHRSVVTWNSMLCGFSQNGNSVEAIS 491
Query: 420 LFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDG--------LSFFKSMQSNFGIEPSIE 471
LF M H L+ + V + +++ ACS G ++ G +S K + ++ + I+
Sbjct: 492 LFDYMYH-SYLEMNEVTFLAVIQACSSIGSLEKGKWVHHKLIISGLKDLFTDTAL---ID 547
Query: 472 HY------------------------LCLVDLLGRAGRFDLALKTIHEM------PVEVQ 501
Y +++ G GR A+ T ++M P EV
Sbjct: 548 MYAKCGDLNAAETVFRAMSSRSIVSWSSMINAYGMHGRIGSAISTFNQMVESGTKPNEV- 606
Query: 502 AQVWAPLLSACMKHHNVELGEYAAKNLLT---LNPGSTGNYILMANLFTSAGMWKEAATA 558
V+ +LSAC +VE G+Y NL+ ++P S ++ +L + +G KEA
Sbjct: 607 --VFMNVLSACGHSGSVEEGKYYF-NLMKSFGVSPNSE-HFACFIDLLSRSGDLKEAY-- 660
Query: 559 RGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLK 603
R + + P + + GS+ V G R H +DI K +K
Sbjct: 661 ------RTIKEMPFLADASVWGSL---VNGCRIHQ-KMDIIKAIK 695
Score = 196 bits (497), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 133/510 (26%), Positives = 264/510 (51%), Gaps = 22/510 (4%)
Query: 34 PLVLKACANINSIWDGKRVHSHVLKVG-FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMP 92
PL ++C+++ + ++H+H+L G ++D T LI+ Y+ SSR V + P
Sbjct: 6 PL-FRSCSSLRLV---SQLHAHLLVTGRLRRDPLPVTKLIESYAFMGSPDSSRLVFEAFP 61
Query: 93 VRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCSFRQ----- 147
+ +I + L D AI + + ++S F SV+ C+ +
Sbjct: 62 --YPDSFMYGVLIKCNVWCHLLDAAIDLYHRLVSETTQISKFVFPSVLRACAGSREHLSV 119
Query: 148 GISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYV 207
G +H + K G+ +++ + S++ MY + G +++A +FD + +V+W+T++ +
Sbjct: 120 GGKVHGRIIKGGV-DDDAVIETSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCL 178
Query: 208 NVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDP 267
G V +A + M V PD V ++++ GCA++G L +A S+H + + ++ ++
Sbjct: 179 ENGEVVKALRMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDLDET 238
Query: 268 LDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTS 327
L N L++MY+KCGDL + R+F+ + +K+ WT+MI Y + + +A+ F ++K+
Sbjct: 239 LCNSLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMIKSG 298
Query: 328 VRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQ-VQTSLIHMFSKCGRINKA 386
+ PN TL + LS+C +G + +GK + + V L+ N + + +L+ ++++CG+++
Sbjct: 299 IEPNLVTLYSVLSSCGLIGLIREGKSVHGFAVRRELDPNYESLSLALVELYAECGKLSDC 358
Query: 387 KEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSH 446
+ V V D+++ W+++I+ YA GM QAL LF +M + +KPDA S +SAC +
Sbjct: 359 ETVLRVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQMV-TQRIKPDAFTLASSISACEN 417
Query: 447 SGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWA 506
+G+V G + + +++ L+D+ ++G D A T+ W
Sbjct: 418 AGLVPLGKQIHGHVIRTDVSDEFVQN--SLIDMYSKSGSVDSA-STVFNQIKHRSVVTWN 474
Query: 507 PLLSACMKHHN----VELGEYAAKNLLTLN 532
+L ++ N + L +Y + L +N
Sbjct: 475 SMLCGFSQNGNSVEAISLFDYMYHSYLEMN 504
>gi|356546044|ref|XP_003541442.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g14730-like [Glycine max]
Length = 628
Score = 340 bits (872), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 190/592 (32%), Positives = 318/592 (53%), Gaps = 15/592 (2%)
Query: 37 LKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLR 96
L++CA+ ++ GK +H+H+LK F T LI+MYSKCS S +V + +
Sbjct: 36 LQSCAHNANLSKGKELHTHLLKNAFFGSPLAITSLINMYSKCSLIDHSLRVFNFPTHHNK 95
Query: 97 SVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCSFRQG----ISMH 152
+V ++N++I+ L A+ + +M LG+ TF V+ C +H
Sbjct: 96 NVFAYNALIAGFLANALPQRALALYNQMRHLGIAPDKFTFPCVIRACGDDDDGFVVTKIH 155
Query: 153 CCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNV 212
++K+GL ++ + +++++ Y KF V EA +F+E+ +V W ++ G+ +G
Sbjct: 156 GLMFKVGL-ELDVFVGSALVNTYLKFRFVGEAYRVFEELPVRDVVLWNAMVNGFAQIGRF 214
Query: 213 NEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLL 272
EA G+ +M V P ++ + +G+ ++H + K GY + + N L
Sbjct: 215 EEALGVFRRMGGNGVVPCRYTVTGVLSIFSVMGDFDNGRAVHGFVTKMGYESGVVVSNAL 274
Query: 273 VSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTS-VRPN 331
+ MY KC + A VF+ + E +F W S++ + + G + LF R++ +S V+P+
Sbjct: 275 IDMYGKCKCVGDALSVFEMMDEIDIFSWNSIMSVHERCGDHYGTLRLFDRMMGSSRVQPD 334
Query: 332 EATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQ--------VQTSLIHMFSKCGRI 383
T+ T L AC L +L G+EI Y+V+NGL + +L+ M++KCG +
Sbjct: 335 LVTVTTVLPACTHLAALMHGREIHGYMVVNGLAKEESHDVFDDVLLNNALMDMYAKCGNM 394
Query: 384 NKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSA 443
A+ VF + +KD+A W+ MI GY +HG G +AL++F +M + + P+ + + +LSA
Sbjct: 395 RDARMVFVNMREKDVASWNIMITGYGMHGYGGEALDIFSRMCQAQ-MVPNEISFVGLLSA 453
Query: 444 CSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQ 503
CSH+GMV +GL F M+S +G+ PSIEHY C++D+L RAG+ A + MP +
Sbjct: 454 CSHAGMVKEGLGFLSEMESKYGVSPSIEHYTCVIDMLCRAGQLMEAYDLVLTMPFKADPV 513
Query: 504 VWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMD 563
W LL+AC H++ +L E AA ++ L P GNY+LM+N++ G ++E R M
Sbjct: 514 GWRSLLAACRLHNDTDLAEVAASKVIELEPDHCGNYVLMSNVYGVVGRYEEVLEWRYTMK 573
Query: 564 DRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKELHIKLLEAGYI 615
+ + K PG S +E+ V VF+ GDR+H + I L L L E GY+
Sbjct: 574 QQNVKKRPGCSWIELVNGVHVFITGDRTHPQTEYIYAGLNSLTAVLQEHGYV 625
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 122/424 (28%), Positives = 213/424 (50%), Gaps = 24/424 (5%)
Query: 12 EETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGL 71
+ L+ Y+ M G+ + FTFP V++AC + + + ++H + KVG + D FV + L
Sbjct: 114 QRALALYNQMRHLGIAPDKFTFPCVIRACGDDDDGFVVTKIHGLMFKVGLELDVFVGSAL 173
Query: 72 IDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLEL 131
++ Y K + +V +E+PV R VV WN++++ ++ +EA+ V + M G+
Sbjct: 174 VNTYLKFRFVGEAYRVFEELPV--RDVVLWNAMVNGFAQIGRFEEALGVFRRMGGNGVVP 231
Query: 132 SASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSI 187
T V+S S F G ++H V K+G + + ++N+++ MY K V +A S+
Sbjct: 232 CRYTVTGVLSIFSVMGDFDNGRAVHGFVTKMG-YESGVVVSNALIDMYGKCKCVGDALSV 290
Query: 188 FDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMS-VTPDLVVFLNLILGCAQVGN 246
F+ + E I SW +I+ + G+ L ++M S V PDLV ++ C +
Sbjct: 291 FEMMDEIDIFSWNSIMSVHERCGDHYGTLRLFDRMMGSSRVQPDLVTVTTVLPACTHLAA 350
Query: 247 LFLALSMHSLLLKSGYNNEDP--------LDNLLVSMYTKCGDLELARRVFDAVLEKSVF 298
L +H ++ +G E+ L+N L+ MY KCG++ AR VF + EK V
Sbjct: 351 LMHGREIHGYMVVNGLAKEESHDVFDDVLLNNALMDMYAKCGNMRDARMVFVNMREKDVA 410
Query: 299 LWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKG----KEI 354
W MI GY GY EA+++F R+ + + PNE + LSAC+ G + +G E+
Sbjct: 411 SWNIMITGYGMHGYGGEALDIFSRMCQAQMVPNEISFVGLLSACSHAGMVKEGLGFLSEM 470
Query: 355 EEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDK-DLAVWSAMINGYAIHGM 413
E G+ + + T +I M + G++ +A ++ +P K D W +++ +H
Sbjct: 471 ESKY---GVSPSIEHYTCVIDMLCRAGQLMEAYDLVLTMPFKADPVGWRSLLAACRLHND 527
Query: 414 GDQA 417
D A
Sbjct: 528 TDLA 531
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 78/294 (26%), Positives = 141/294 (47%), Gaps = 8/294 (2%)
Query: 228 TPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARR 287
T DL + + CA NL +H+ LLK+ + L++MY+KC ++ + R
Sbjct: 26 TYDLGTCIATLQSCAHNANLSKGKELHTHLLKNAFFGSPLAITSLINMYSKCSLIDHSLR 85
Query: 288 VFDAVLE--KSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAEL 345
VF+ K+VF + ++I G+ P A+ L+ ++ + P++ T + AC +
Sbjct: 86 VFNFPTHHNKNVFAYNALIAGFLANALPQRALALYNQMRHLGIAPDKFTFPCVIRACGDD 145
Query: 346 GSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMI 405
+I + GLE + V ++L++ + K + +A VFE +P +D+ +W+AM+
Sbjct: 146 DDGFVVTKIHGLMFKVGLELDVFVGSALVNTYLKFRFVGEAYRVFEELPVRDVVLWNAMV 205
Query: 406 NGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFG 465
NG+A G ++AL +F +M G+ P T +LS S G D+G + + G
Sbjct: 206 NGFAQIGRFEEALGVFRRMGG-NGVVPCRYTVTGVLSIFSVMGDFDNGRA-VHGFVTKMG 263
Query: 466 IEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSA---CMKHH 516
E + L+D+ G+ AL ++ EM E+ W ++S C H+
Sbjct: 264 YESGVVVSNALIDMYGKCKCVGDAL-SVFEMMDEIDIFSWNSIMSVHERCGDHY 316
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 76/261 (29%), Positives = 121/261 (46%), Gaps = 22/261 (8%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
M+ G FEE L + M GV +T VL + + +G+ VH V K+G
Sbjct: 204 MVNGFAQIGRFEEALGVFRRMGGNGVVPCRYTVTGVLSIFSVMGDFDNGRAVHGFVTKMG 263
Query: 61 FQQDAFVQTGLIDMYSKCS---DFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEA 117
++ V LIDMY KC D +S +++DE+ + SWNSI+S H R C +
Sbjct: 264 YESGVVVSNALIDMYGKCKCVGDALSVFEMMDEI-----DIFSWNSIMSVHER-CGDHYG 317
Query: 118 ILVL--KEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNE------- 164
L L + M ++ T +V+ C+ G +H + GL E
Sbjct: 318 TLRLFDRMMGSSRVQPDLVTVTTVLPACTHLAALMHGREIHGYMVVNGLAKEESHDVFDD 377
Query: 165 IPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRR 224
+ L N++M MYAK G + +AR +F + E + SW +I GY G EA + ++M +
Sbjct: 378 VLLNNALMDMYAKCGNMRDARMVFVNMREKDVASWNIMITGYGMHGYGGEALDIFSRMCQ 437
Query: 225 MSVTPDLVVFLNLILGCAQVG 245
+ P+ + F+ L+ C+ G
Sbjct: 438 AQMVPNEISFVGLLSACSHAG 458
>gi|297838697|ref|XP_002887230.1| hypothetical protein ARALYDRAFT_476061 [Arabidopsis lyrata subsp.
lyrata]
gi|297333071|gb|EFH63489.1| hypothetical protein ARALYDRAFT_476061 [Arabidopsis lyrata subsp.
lyrata]
Length = 1347
Score = 340 bits (872), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 191/618 (30%), Positives = 332/618 (53%), Gaps = 10/618 (1%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
++ + N + L + M+ GV ++ T V++ CA + + + VH + +
Sbjct: 731 LVSSCLENCEVLKALRMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQITRKM 790
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F D + L+ MYSKC D +SS K+ ++ + ++ VSW ++IS+++R +++A+
Sbjct: 791 FDFDETLCNSLLTMYSKCGDLLSSEKIFEK--IAKKNAVSWTAMISSYNRGEFSEKALRS 848
Query: 121 LKEMWVLGLELSASTFVSVVSGCSF----RQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
EM G+E + T S++S C R+G S+H + L N L+ +++ +YA
Sbjct: 849 FSEMLKSGIEPNLVTLYSILSSCGLNGLIREGKSVHGFAIRRELDPNYESLSPALVELYA 908
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
+ G++ + +I +G+ +IV W + I Y + G V EA L QM + PD +
Sbjct: 909 ECGRLGDCETILHVVGDRNIVLWNSHISLYAHRGMVIEALCLFRQMVTWRIKPDSFTLAS 968
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
+I C G + L +H ++++ ++E + N ++ MY+K G + LA VFD + +S
Sbjct: 969 IISACENTGLVRLGKQIHGHVIRTDVSDEF-VQNSVIDMYSKSGFVNLACTVFDQIKHRS 1027
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEE 356
+ W SM+ G++Q G EA+NLF + + + N+ T + AC+ +GSL KG+ +
Sbjct: 1028 IVTWNSMLCGFSQNGNSLEAINLFDYMYHSCLEINKVTFLAVIQACSSIGSLEKGRWVHH 1087
Query: 357 YIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQ 416
+++ G++ + T+LI M++KCG +N A+ VF + ++ + WS+MIN Y +HG
Sbjct: 1088 KLIVCGIK-DLFTDTALIDMYAKCGDLNTAETVFRAMSNRSIVSWSSMINAYGMHGRIGS 1146
Query: 417 ALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCL 476
A++ F +M G KP+ VV+ ++LSAC HSG V++G +F M+ FG+ P+ EH+ C
Sbjct: 1147 AISTFNQMVE-SGTKPNEVVFMNVLSACGHSGSVEEGKYYFNLMKL-FGVSPNSEHFACF 1204
Query: 477 VDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGST 536
+DLL R+G A +TI EMP A VW L++ C H +++ + ++ + T
Sbjct: 1205 IDLLSRSGDLKEAYRTIKEMPFLADASVWGSLVNGCRIHQKMDIIKAIKNDISDIVTDDT 1264
Query: 537 GNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSV 596
G Y L++N++ G W+E R M L K PG+S +EID V F AG+ + +
Sbjct: 1265 GYYTLLSNIYAEEGEWEEFRRMRSAMKSLNLKKVPGYSAIEIDKKVFRFGAGEETCFQTE 1324
Query: 597 DIRKTLKELHIKLLEAGY 614
+I L L LE Y
Sbjct: 1325 EIYMFLGNLQNLTLEEDY 1342
Score = 227 bits (578), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 177/642 (27%), Positives = 317/642 (49%), Gaps = 76/642 (11%)
Query: 11 FEETLSTYSSMLQTGVHGNSFTFPLVLKACA-NINSIWDGKRVHSHVLKVGFQQDAFVQT 69
+ + Y ++ + F FP VL+ACA + + G++VH ++K G DA ++T
Sbjct: 639 LDAAIDLYHRLVSEKTQISKFVFPSVLRACAGSREHLSVGRKVHGRIIKSGVDDDAVIET 698
Query: 70 GLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGL 129
L+ MY + + + KV D MPV R +V+W++++S+ C +A+ + K M G+
Sbjct: 699 SLLCMYGQTGNLSDAEKVFDGMPV--RDLVAWSTLVSSCLENCEVLKALRMFKCMVDDGV 756
Query: 130 ELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEAR 185
E A T +SVV GC+ R S+H + + + + + L NS+++MY+K G + +
Sbjct: 757 EPDAVTMISVVEGCAELGCLRIARSVHGQITR-KMFDFDETLCNSLLTMYSKCGDLLSSE 815
Query: 186 SIFDEIGETSIVSWTTIIGGYVNVGNVNE-AFGLCNQMRRMSVTPDLVVFLNLILGCAQV 244
IF++I + + VSWT +I Y N G +E A ++M + + P+LV +++ C
Sbjct: 816 KIFEKIAKKNAVSWTAMISSY-NRGEFSEKALRSFSEMLKSGIEPNLVTLYSILSSCGLN 874
Query: 245 GNLFLALSMHSLLLKSGYN-NEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSM 303
G + S+H ++ + N + L LV +Y +CG L + V ++++ LW S
Sbjct: 875 GLIREGKSVHGFAIRRELDPNYESLSPALVELYAECGRLGDCETILHVVGDRNIVLWNSH 934
Query: 304 IGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGL 363
I YA G EA+ LF++++ ++P+ TLA+ +SAC G + GK+I +++ +
Sbjct: 935 ISLYAHRGMVIEALCLFRQMVTWRIKPDSFTLASIISACENTGLVRLGKQIHGHVIRTDV 994
Query: 364 ESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYK 423
S+ VQ S+I M+SK G +N A VF+++ + + W++M+ G++ +G +A+NLF
Sbjct: 995 -SDEFVQNSVIDMYSKSGFVNLACTVFDQIKHRSIVTWNSMLCGFSQNGNSLEAINLFDY 1053
Query: 424 MQHVEGLKPDAVVYTSILSACSHSGMVDDGL----------------------------- 454
M H L+ + V + +++ ACS G ++ G
Sbjct: 1054 MYH-SCLEINKVTFLAVIQACSSIGSLEKGRWVHHKLIVCGIKDLFTDTALIDMYAKCGD 1112
Query: 455 -----SFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEM------PVEVQAQ 503
+ F++M + SI + +++ G GR A+ T ++M P EV
Sbjct: 1113 LNTAETVFRAMSNR-----SIVSWSSMINAYGMHGRIGSAISTFNQMVESGTKPNEV--- 1164
Query: 504 VWAPLLSACMKHHNVELGEYAAK--NLLTLNPGSTGNYILMANLFTSAGMWKEAATARGL 561
V+ +LSAC +VE G+Y L ++P S ++ +L + +G KEA
Sbjct: 1165 VFMNVLSACGHSGSVEEGKYYFNLMKLFGVSPNSE-HFACFIDLLSRSGDLKEAY----- 1218
Query: 562 MDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLK 603
R + + P + + GS+ V G R H +DI K +K
Sbjct: 1219 ---RTIKEMPFLADASVWGSL---VNGCRIHQ-KMDIIKAIK 1253
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 115/425 (27%), Positives = 230/425 (54%), Gaps = 14/425 (3%)
Query: 36 VLKACANINSIWDGKRVHSHVLKVG-FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVR 94
+ ++C+++ + ++H+H+L G ++D T LI+ Y+ SSR V + P
Sbjct: 565 LFRSCSSLRLV---SQLHAHLLVTGRLRRDPLPVTKLIESYAFMGSPDSSRLVFEAFP-- 619
Query: 95 LRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCSFRQ-----GI 149
+ +I + L D AI + + ++S F SV+ C+ + G
Sbjct: 620 YPDSFMYGVLIKCNVWCHLLDAAIDLYHRLVSEKTQISKFVFPSVLRACAGSREHLSVGR 679
Query: 150 SMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNV 209
+H + K G+ ++ + + S++ MY + G +++A +FD + +V+W+T++ +
Sbjct: 680 KVHGRIIKSGVDDDAV-IETSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLEN 738
Query: 210 GNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLD 269
V +A + M V PD V ++++ GCA++G L +A S+H + + ++ ++ L
Sbjct: 739 CEVLKALRMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDFDETLC 798
Query: 270 NLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVR 329
N L++MY+KCGDL + ++F+ + +K+ WT+MI Y + + +A+ F +LK+ +
Sbjct: 799 NSLLTMYSKCGDLLSSEKIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMLKSGIE 858
Query: 330 PNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQ-VQTSLIHMFSKCGRINKAKE 388
PN TL + LS+C G + +GK + + + L+ N + + +L+ ++++CGR+ +
Sbjct: 859 PNLVTLYSILSSCGLNGLIREGKSVHGFAIRRELDPNYESLSPALVELYAECGRLGDCET 918
Query: 389 VFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSG 448
+ V D+++ +W++ I+ YA GM +AL LF +M +KPD+ SI+SAC ++G
Sbjct: 919 ILHVVGDRNIVLWNSHISLYAHRGMVIEALCLFRQMVTWR-IKPDSFTLASIISACENTG 977
Query: 449 MVDDG 453
+V G
Sbjct: 978 LVRLG 982
>gi|297828580|ref|XP_002882172.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297328012|gb|EFH58431.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 638
Score = 340 bits (872), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 192/618 (31%), Positives = 316/618 (51%), Gaps = 10/618 (1%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLK-V 59
++++ + + +E+ + +S M + ++FT P+ LKAC + + G+ +H + K V
Sbjct: 12 LLKSLSRDKHWEQVMCHFSQMFRDEEKPDNFTLPVALKACGELREVKYGEMIHGFLKKNV 71
Query: 60 GFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAIL 119
D +V + LI MY KC + ++ +E+ +V+W+S++S + +A+
Sbjct: 72 TLGSDLYVGSSLIYMYVKCGRMTEALRMFNEL--EKPDIVTWSSMVSGFEKNGSPYQAVE 129
Query: 120 VLKEMWVLG-LELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSM 174
+ M + T +++VS C+ R G +H V + G +N++ L NS+++
Sbjct: 130 FFRRMATASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVMRRGF-SNDLSLVNSLLNC 188
Query: 175 YAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVF 234
YAK EA ++F + E ++SW+T+I YV G EA + N+M P++
Sbjct: 189 YAKSRAFKEAVNLFKMMAEKDVISWSTVIACYVQNGAAAEALRVFNEMIDDGTEPNVATV 248
Query: 235 LNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLE 294
L ++ CA +L H L ++ G E + LV MY KC E A VF + +
Sbjct: 249 LCVLQACAAANDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAVFSRIPK 308
Query: 295 KSVFLWTSMIGGYAQLGYPSEAVNLFK-RLLKTSVRPNEATLATTLSACAELGSLSKGKE 353
K V W ++I G+ G ++ F LL+ + RP+ + L +C+ELG L + +
Sbjct: 309 KDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMLKVLGSCSELGFLKQAEC 368
Query: 354 IEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGM 413
Y++ G +SN + SL+ ++S+CG + A +VF + KD VW+++I GY IHG
Sbjct: 369 FHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNEIALKDTVVWTSLITGYGIHGK 428
Query: 414 GDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHY 473
G +AL F M +KP+ V + SILSACSH+G++ +GL F+ M +++ + P++EHY
Sbjct: 429 GTKALETFNHMVRSSEVKPNEVTFLSILSACSHAGLIHEGLRIFELMVNDYRLAPNLEHY 488
Query: 474 LCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNP 533
LVDLLGR G D A++ MP Q+ LL AC H N E+ E AK L L
Sbjct: 489 AVLVDLLGRVGELDTAIEITKRMPFSPTPQILGTLLGACRIHQNGEMAETVAKQLFELES 548
Query: 534 GSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHH 593
G Y+LM+N++ G W+ R + R + K S +EI V FVA D H
Sbjct: 549 NHAGYYMLMSNMYGVKGEWENVEKLRNSVKQRGIKKGLAESLIEIRRKVHKFVADDDLHP 608
Query: 594 LSVDIRKTLKELHIKLLE 611
+ LKEL + + E
Sbjct: 609 EKEPVYGLLKELDLHMKE 626
>gi|15228590|ref|NP_187008.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207453|sp|Q9SS60.1|PP210_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g03580
gi|6091764|gb|AAF03474.1|AC009327_13 hypothetical protein [Arabidopsis thaliana]
gi|28393735|gb|AAO42278.1| unknown protein [Arabidopsis thaliana]
gi|29824355|gb|AAP04138.1| unknown protein [Arabidopsis thaliana]
gi|332640438|gb|AEE73959.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 882
Score = 340 bits (872), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 199/620 (32%), Positives = 335/620 (54%), Gaps = 7/620 (1%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+I +++G +EE L Y + + + +SFT VL A N+ + G+ +H LK G
Sbjct: 178 LISGYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSG 237
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
V GL+ MY K +R+V DEM VR VS+N++I + + + +E++ +
Sbjct: 238 VNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVR--DSVSYNTMICGYLKLEMVEESVRM 295
Query: 121 LKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGLLNN---EIPLANSVMSMYAK 177
E + + T SV+ C + +S+ +Y L E + N ++ +YAK
Sbjct: 296 FLEN-LDQFKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAK 354
Query: 178 FGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNL 237
G + AR +F+ + VSW +II GY+ G++ EA L M M D + +L L
Sbjct: 355 CGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLML 414
Query: 238 ILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSV 297
I ++ +L +HS +KSG + + N L+ MY KCG++ + ++F ++
Sbjct: 415 ISVSTRLADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDT 474
Query: 298 FLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEY 357
W ++I + G + + + ++ K+ V P+ AT TL CA L + GKEI
Sbjct: 475 VTWNTVISACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCC 534
Query: 358 IVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQA 417
++ G ES Q+ +LI M+SKCG + + VFER+ +D+ W+ MI Y ++G G++A
Sbjct: 535 LLRFGYESELQIGNALIEMYSKCGCLENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEKA 594
Query: 418 LNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLV 477
L F M+ G+ PD+VV+ +I+ ACSHSG+VD+GL+ F+ M++++ I+P IEHY C+V
Sbjct: 595 LETFADMEK-SGIVPDSVVFIAIIYACSHSGLVDEGLACFEKMKTHYKIDPMIEHYACVV 653
Query: 478 DLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTG 537
DLL R+ + A + I MP++ A +WA +L AC ++E E ++ ++ LNP G
Sbjct: 654 DLLSRSQKISKAEEFIQAMPIKPDASIWASVLRACRTSGDMETAERVSRRIIELNPDDPG 713
Query: 538 NYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVD 597
IL +N + + W + + R + D+ +TK PG+S +E+ +V VF +GD S S
Sbjct: 714 YSILASNAYAALRKWDKVSLIRKSLKDKHITKNPGYSWIEVGKNVHVFSSGDDSAPQSEA 773
Query: 598 IRKTLKELHIKLLEAGYIAE 617
I K+L+ L+ + + GYI +
Sbjct: 774 IYKSLEILYSLMAKEGYIPD 793
Score = 215 bits (547), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 137/453 (30%), Positives = 235/453 (51%), Gaps = 17/453 (3%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+IR + NG F E L Y + ++ V + +TFP V+KACA + G V+ +L +G
Sbjct: 77 IIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQILDMG 136
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F+ D FV L+DMYS+ +R+V DEMPV R +VSWNS+IS +S +EA+ +
Sbjct: 137 FESDLFVGNALVDMYSRMGLLTRARQVFDEMPV--RDLVSWNSLISGYSSHGYYEEALEI 194
Query: 121 ---LKEMWVLGLELSASTFVSVVSG-CSFRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
LK W++ + S+ + +QG +H K G+ + + + N +++MY
Sbjct: 195 YHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVV-VNNGLVAMYL 253
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGL----CNQMRRMSVTPDLV 232
KF + +AR +FDE+ VS+ T+I GY+ + V E+ + +Q + PDL+
Sbjct: 254 KFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLENLDQFK-----PDLL 308
Query: 233 VFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAV 292
+++ C + +L LA +++ +LK+G+ E + N+L+ +Y KCGD+ AR VF+++
Sbjct: 309 TVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSM 368
Query: 293 LEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGK 352
K W S+I GY Q G EA+ LFK ++ + + T +S L L GK
Sbjct: 369 ECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGK 428
Query: 353 EIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHG 412
+ + +G+ + V +LI M++KCG + + ++F + D W+ +I+ G
Sbjct: 429 GLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFG 488
Query: 413 MGDQALNLFYKMQHVEGLKPDAVVYTSILSACS 445
L + +M+ E + PD + L C+
Sbjct: 489 DFATGLQVTTQMRKSE-VVPDMATFLVTLPMCA 520
Score = 172 bits (435), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 142/498 (28%), Positives = 244/498 (48%), Gaps = 22/498 (4%)
Query: 34 PLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPV 93
P + +A ++ +++ + +R+H+ V+ +G F LID YS + SS V +
Sbjct: 8 PFISRALSSSSNLNELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVS- 66
Query: 94 RLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCSFRQGISMHC 153
++V WNSII A S+ L EA+ ++ + TF SV+ C+ M
Sbjct: 67 PAKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGD 126
Query: 154 CVYKLGL---LNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVG 210
VY+ L +++ + N+++ MY++ G + AR +FDE+ +VSW ++I GY + G
Sbjct: 127 LVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHG 186
Query: 211 NVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFL---ALSMHSLLLKSGYNNEDP 267
EA + ++++ + PD +++ GNL + +H LKSG N+
Sbjct: 187 YYEEALEIYHELKNSWIVPDSFTVSSVL---PAFGNLLVVKQGQGLHGFALKSGVNSVVV 243
Query: 268 LDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTS 327
++N LV+MY K ARRVFD + + + +MI GY +L E+V +F L
Sbjct: 244 VNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLENLD-Q 302
Query: 328 VRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAK 387
+P+ T+++ L AC L LS K I Y++ G V+ LI +++KCG + A+
Sbjct: 303 FKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITAR 362
Query: 388 EVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHS 447
+VF + KD W+++I+GY G +A+ LF KM + + D + Y ++S +
Sbjct: 363 DVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLF-KMMMIMEEQADHITYLMLISVSTR- 420
Query: 448 GMVDDGLSFFKSMQSNFGIEPSIEHYL----CLVDLLGRAGRFDLALKTIHEMPVEVQAQ 503
+ D L F K + SN GI+ I L L+D+ + G +LK M
Sbjct: 421 -LAD--LKFGKGLHSN-GIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTG-DTV 475
Query: 504 VWAPLLSACMKHHNVELG 521
W ++SAC++ + G
Sbjct: 476 TWNTVISACVRFGDFATG 493
>gi|449461217|ref|XP_004148338.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g34400-like [Cucumis sativus]
Length = 619
Score = 340 bits (872), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 196/599 (32%), Positives = 328/599 (54%), Gaps = 18/599 (3%)
Query: 30 SFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDM--YSKCSDFVSSRKV 87
S F +L+ C +I + K++H+ +L + + D+ ++ S F S+ +
Sbjct: 32 SDKFNSLLQQCLSIKQL---KQIHAQLLTNSIHKPNSFLYKIADLKDFAYASVFFSN--I 86
Query: 88 LDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCS--- 144
LD P V + +A +++ L A+ M LGL+ + T+ + CS
Sbjct: 87 LD--PTEYSFNVMIRGLSTAWNKSSL---ALEFYSRMKFLGLKPNNLTYPFLFIACSNLL 141
Query: 145 -FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTII 203
G HC V + GL + + +++S+++MYA+ GK+ +AR +FDEI + +VSW ++I
Sbjct: 142 AVENGRMGHCSVIRRGL-DEDGHVSHSLITMYARCGKMGDARKVFDEISQKDLVSWNSMI 200
Query: 204 GGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYN 263
GY + + EA GL +M P+ + ++++ C ++G+L L + ++++
Sbjct: 201 SGYSKMRHAGEAVGLFREMMEAGFQPNEMSLVSVLGACGELGDLKLGTWVEEFVVENKMT 260
Query: 264 NEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRL 323
+ + L+ MY KCGDL ARR+FD++ +K W +MI GYAQ G EA+ LF+ +
Sbjct: 261 LNYFMGSALIHMYGKCGDLVSARRIFDSMKKKDKVTWNAMITGYAQNGMSEEAIKLFQDM 320
Query: 324 LKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRI 383
+S P++ TL LSACA +G+L GK++E Y G + + V T+L+ M++KCG +
Sbjct: 321 RMSSTAPDQITLIGILSACASIGALDLGKQVEIYASERGFQDDVYVGTALVDMYAKCGSL 380
Query: 384 NKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEG-LKPDAVVYTSILS 442
+ A VF +P+K+ W+AMI+ A HG +AL LF M + G + P+ + + +LS
Sbjct: 381 DNAFRVFYGMPNKNEVSWNAMISALAFHGQAQEALALFKSMMNEGGTVSPNDITFVGVLS 440
Query: 443 ACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQA 502
AC H+G+VD+G F M S+FG+ P IEHY C+VDL RAG + A + MP +
Sbjct: 441 ACVHAGLVDEGRRLFHMMSSSFGLVPKIEHYSCMVDLFSRAGHLEEAWDFVMTMPEKPDE 500
Query: 503 QVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLM 562
+ LL AC K N+++ E K LL L P ++GNY++ + L+ + W ++A R LM
Sbjct: 501 VILGALLGACQKRKNIDISERVMKLLLELEPSNSGNYVISSKLYANLRRWDDSARMRMLM 560
Query: 563 DDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKELHIKLLEAGYIAEADIV 621
+ ++K PG S ++I+ + F AGD H ++I + L L L GYI A+++
Sbjct: 561 KQKGVSKTPGCSWIDINSQLHEFHAGDVLHQEWIEIHQILDLLIDDLRREGYIPNANLL 619
Score = 194 bits (492), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 117/390 (30%), Positives = 199/390 (51%), Gaps = 10/390 (2%)
Query: 14 TLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLID 73
L YS M G+ N+ T+P + AC+N+ ++ +G+ H V++ G +D V LI
Sbjct: 111 ALEFYSRMKFLGLKPNNLTYPFLFIACSNLLAVENGRMGHCSVIRRGLDEDGHVSHSLIT 170
Query: 74 MYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSA 133
MY++C +RKV DE + + +VSWNS+IS +S+ EA+ + +EM G + +
Sbjct: 171 MYARCGKMGDARKVFDE--ISQKDLVSWNSMISGYSKMRHAGEAVGLFREMMEAGFQPNE 228
Query: 134 STFVSVVSGCSFRQGISMHCCVYKLGLLNNEIPL----ANSVMSMYAKFGKVNEARSIFD 189
+ VSV+ C + + V + ++ N++ L ++++ MY K G + AR IFD
Sbjct: 229 MSLVSVLGACGELGDLKLGTWVEEF-VVENKMTLNYFMGSALIHMYGKCGDLVSARRIFD 287
Query: 190 EIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFL 249
+ + V+W +I GY G EA L MR S PD + + ++ CA +G L L
Sbjct: 288 SMKKKDKVTWNAMITGYAQNGMSEEAIKLFQDMRMSSTAPDQITLIGILSACASIGALDL 347
Query: 250 ALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQ 309
+ + G+ ++ + LV MY KCG L+ A RVF + K+ W +MI A
Sbjct: 348 GKQVEIYASERGFQDDVYVGTALVDMYAKCGSLDNAFRVFYGMPNKNEVSWNAMISALAF 407
Query: 310 LGYPSEAVNLFKRLLKT--SVRPNEATLATTLSACAELGSLSKGKEIEEYIVLN-GLESN 366
G EA+ LFK ++ +V PN+ T LSAC G + +G+ + + + GL
Sbjct: 408 HGQAQEALALFKSMMNEGGTVSPNDITFVGVLSACVHAGLVDEGRRLFHMMSSSFGLVPK 467
Query: 367 RQVQTSLIHMFSKCGRINKAKEVFERVPDK 396
+ + ++ +FS+ G + +A + +P+K
Sbjct: 468 IEHYSCMVDLFSRAGHLEEAWDFVMTMPEK 497
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 115/239 (48%), Gaps = 9/239 (3%)
Query: 13 ETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLI 72
E + + M++ G N + VL AC + + G V V++ + F+ + LI
Sbjct: 211 EAVGLFREMMEAGFQPNEMSLVSVLGACGELGDLKLGTWVEEFVVENKMTLNYFMGSALI 270
Query: 73 DMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELS 132
MY KC D VS+R++ D M + + V+WN++I+ +++ +++EAI + ++M +
Sbjct: 271 HMYGKCGDLVSARRIFDSM--KKKDKVTWNAMITGYAQNGMSEEAIKLFQDMRMSSTAPD 328
Query: 133 ASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIF 188
T + ++S C + G + + G +++ + +++ MYAK G ++ A +F
Sbjct: 329 QITLIGILSACASIGALDLGKQVEIYASERG-FQDDVYVGTALVDMYAKCGSLDNAFRVF 387
Query: 189 DEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRM--SVTPDLVVFLNLILGCAQVG 245
+ + VSW +I G EA L M +V+P+ + F+ ++ C G
Sbjct: 388 YGMPNKNEVSWNAMISALAFHGQAQEALALFKSMMNEGGTVSPNDITFVGVLSACVHAG 446
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 119/266 (44%), Gaps = 44/266 (16%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI NG EE + + M + + T +L ACA+I ++ GK+V + + G
Sbjct: 300 MITGYAQNGMSEEAIKLFQDMRMSSTAPDQITLIGILSACASIGALDLGKQVEIYASERG 359
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
FQ D +V T L+DMY+KC ++ +V MP ++ VSWN++ISA + EA+ +
Sbjct: 360 FQDDVYVGTALVDMYAKCGSLDNAFRVFYGMPN--KNEVSWNAMISALAFHGQAQEALAL 417
Query: 121 LKEMWVLGLELSAS--TFVSVVSGCSFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKF 178
K M G +S + TFV V+S C +H
Sbjct: 418 FKSMMNEGGTVSPNDITFVGVLSAC-------VHA------------------------- 445
Query: 179 GKVNEARSIFDEIGET-----SIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVV 233
G V+E R +F + + I ++ ++ + G++ EA+ + M PD V+
Sbjct: 446 GLVDEGRRLFHMMSSSFGLVPKIEHYSCMVDLFSRAGHLEEAWDF---VMTMPEKPDEVI 502
Query: 234 FLNLILGCAQVGNLFLALSMHSLLLK 259
L+ C + N+ ++ + LLL+
Sbjct: 503 LGALLGACQKRKNIDISERVMKLLLE 528
>gi|359482004|ref|XP_002276764.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like [Vitis vinifera]
Length = 681
Score = 340 bits (872), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 187/592 (31%), Positives = 319/592 (53%), Gaps = 9/592 (1%)
Query: 36 VLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRL 95
V++ A + GK++H+ ++ G+ F+ L++MYSKC + + K+ D MP
Sbjct: 11 VIQTYAKTKRLRRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALKLFDTMP--Q 68
Query: 96 RSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGC----SFRQGISM 151
R++VSW ++IS S+ EAI M + G + F S + C S G M
Sbjct: 69 RNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMGKQM 128
Query: 152 HCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGN 211
HC K G+ +E+ + +++ MY+K G + +A +F+E+ VSWT +I GY +G
Sbjct: 129 HCLALKFGI-GSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKIGE 187
Query: 212 VNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNL 271
EA +M VT D V + + C + S+HS ++K G+ ++ + N
Sbjct: 188 FEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVGNA 247
Query: 272 LVSMYTKCGDLELARRVFDAVLE-KSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRP 330
L MY+K GD+E A VF E ++V +T +I GY + + +++F L + + P
Sbjct: 248 LTDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGIEP 307
Query: 331 NEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVF 390
NE T ++ + ACA +L +G ++ ++ + + V + L+ M+ KCG + +A + F
Sbjct: 308 NEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEQAIQAF 367
Query: 391 ERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMV 450
+ + D W+++++ + HG+G A+ +F +M G+KP+A+ + S+L+ CSH+G+V
Sbjct: 368 DEIGDPTEIAWNSLVSVFGQHGLGKDAIKIFERMVD-RGVKPNAITFISLLTGCSHAGLV 426
Query: 451 DDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLS 510
++GL +F SM +G+ P EHY C++DLLGRAGR A + I+ MP E A W L
Sbjct: 427 EEGLDYFYSMDKTYGVVPGEEHYSCVIDLLGRAGRLKEAKEFINRMPFEPNAFGWCSFLG 486
Query: 511 ACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKE 570
AC H + E+G+ AA+ L+ L P ++G +L++N++ + W++ + R M D + K
Sbjct: 487 ACRIHGDKEMGKLAAEKLVKLEPKNSGALVLLSNIYANERQWEDVRSVRMRMRDGNVKKL 546
Query: 571 PGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKELHIKLLEAGYIAEADIVP 622
PG+S V++ VF A D SH I + L L ++ AGY+ D VP
Sbjct: 547 PGYSWVDVGYKTHVFGAEDWSHPRKSAIYEKLDTLLDQIKAAGYVPRTDSVP 598
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 129/439 (29%), Positives = 221/439 (50%), Gaps = 21/439 (4%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI + N F E + T+ M G F F ++ACA++ SI GK++H LK G
Sbjct: 77 MISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMGKQMHCLALKFG 136
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+ FV + L DMYSKC + KV +EMP + VSW ++I +S+ +EA+L
Sbjct: 137 IGSELFVGSNLEDMYSKCGAMFDACKVFEEMPC--KDEVSWTAMIDGYSKIGEFEEALLA 194
Query: 121 LKEMWVLGLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
K+M + + S + C + + G S+H V KLG ++I + N++ MY+
Sbjct: 195 FKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLG-FESDIFVGNALTDMYS 253
Query: 177 KFGKVNEARSIFDEIGET-SIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFL 235
K G + A ++F E ++VS+T +I GYV + + + ++RR + P+ F
Sbjct: 254 KAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGIEPNEFTFS 313
Query: 236 NLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEK 295
+LI CA L +H+ ++K ++ + + ++LV MY KCG LE A + FD + +
Sbjct: 314 SLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEQAIQAFDEIGDP 373
Query: 296 SVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEI- 354
+ W S++ + Q G +A+ +F+R++ V+PN T + L+ C+ G + +G +
Sbjct: 374 TEIAWNSLVSVFGQHGLGKDAIKIFERMVDRGVKPNAITFISLLTGCSHAGLVEEGLDYF 433
Query: 355 ----EEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAV-WSAMINGYA 409
+ Y V+ G E + +I + + GR+ +AKE R+P + A W + +
Sbjct: 434 YSMDKTYGVVPGEEH----YSCVIDLLGRAGRLKEAKEFINRMPFEPNAFGWCSFLGACR 489
Query: 410 IHG---MGDQALNLFYKMQ 425
IHG MG A K++
Sbjct: 490 IHGDKEMGKLAAEKLVKLE 508
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 97/337 (28%), Positives = 157/337 (46%), Gaps = 35/337 (10%)
Query: 230 DLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVF 289
D ++I A+ L +H+LL+ +GY L N LV+MY+KCG+L+ A ++F
Sbjct: 4 DTNALAHVIQTYAKTKRLRRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALKLF 63
Query: 290 DAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLS 349
D + ++++ WT+MI G +Q SEA+ F + P + ++ + ACA LGS+
Sbjct: 64 DTMPQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIE 123
Query: 350 KGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYA 409
GK++ + G+ S V ++L M+SKCG + A +VFE +P KD W+AMI+GY+
Sbjct: 124 MGKQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYS 183
Query: 410 IHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACS-----------HSGMVDDGLSF-- 456
G ++AL F KM E + D V S L AC HS +V G
Sbjct: 184 KIGEFEEALLAFKKMID-EEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDI 242
Query: 457 ---------------FKSMQSNFGIEPSIEH---YLCLVDLLGRAGRFDLALKTIHEMP- 497
+S + FGI+ + Y CL+D + + L E+
Sbjct: 243 FVGNALTDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRR 302
Query: 498 --VEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLN 532
+E ++ L+ AC +E G ++ +N
Sbjct: 303 QGIEPNEFTFSSLIKACANQAALEQGTQLHAQVMKIN 339
>gi|356567222|ref|XP_003551820.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g39620-like [Glycine max]
Length = 887
Score = 340 bits (871), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 196/583 (33%), Positives = 314/583 (53%), Gaps = 13/583 (2%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
M+ ++G + E L M + + N + + A + GK VH++ L++G
Sbjct: 299 MMAGYVHHGCYFEVLQLLDEMKRKHIKMNKISVVNSVLAATETRDLEKGKEVHNYALQLG 358
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
D V T ++ MY+KC + +++ + + R +V W++ +SA +A EA+ +
Sbjct: 359 MTSDIVVATPIVSMYAKCGELKKAKEFF--LSLEGRDLVVWSAFLSALVQAGYPGEALSI 416
Query: 121 LKEMWVLGLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
+EM GL+ + S+VS C S R G MHC V K + ++I +A +++SMY
Sbjct: 417 FQEMQHEGLKPDKTILSSLVSACAEISSSRLGKMMHCYVIKADM-GSDISVATTLVSMYT 475
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
+ A ++F+ + +V+W T+I G+ G+ A + +++ V PD ++
Sbjct: 476 RCKSFMYAMTLFNRMHYKDVVAWNTLINGFTKCGDPRLALEMFLRLQLSGVQPDSGTMVS 535
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
L+ CA + +L+L + H ++K+G +E + L+ MY KCG L A +F L K
Sbjct: 536 LLSACALLDDLYLGICFHGNIIKNGIESEMHVKVALIDMYAKCGSLCTAENLFH--LNKH 593
Query: 297 V---FLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKE 353
V W MI GY G +EA++ F ++ SVRPN T T L A + L L +
Sbjct: 594 VKDEVSWNVMIAGYLHNGCANEAISTFNQMKLESVRPNLVTFVTILPAVSYLSILREAMA 653
Query: 354 IEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGM 413
I+ G S+ + SLI M++K G+++ +++ F + +K W+AM++GYA+HG
Sbjct: 654 FHACIIRMGFISSTLIGNSLIDMYAKSGQLSYSEKCFHEMENKGTISWNAMLSGYAMHGQ 713
Query: 414 GDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHY 473
G+ AL LF MQ + D+V Y S+LSAC H+G++ +G + F+SM +EPS+EHY
Sbjct: 714 GEVALALFSLMQETH-VPVDSVSYISVLSACRHAGLIQEGRNIFQSMTEKHNLEPSMEHY 772
Query: 474 LCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNP 533
C+VDLLG AG FD L I +MP E AQVW LL AC H NV+LGE A +LL L P
Sbjct: 773 ACMVDLLGCAGLFDEVLCLIDKMPTEPDAQVWGALLGACKMHSNVKLGEIALHHLLKLEP 832
Query: 534 GSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQV 576
+ +YI++++++ G W +A R M D L K PG+S V
Sbjct: 833 RNAVHYIVLSDIYAQCGRWIDARRTRSNMTDHGLKKNPGYSWV 875
Score = 247 bits (631), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 146/507 (28%), Positives = 270/507 (53%), Gaps = 28/507 (5%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+IR + F+E + +Y +M G+ + +TF VLKAC +G +H +
Sbjct: 98 LIRAYSRLHLFQEAIKSYQTMSYMGLEPDKYTFTFVLKACTGALDFHEGVAIHQDIASRE 157
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+ D F+ TGL+DMY K ++RKV D+MP + V SWN++IS S++ EA+ +
Sbjct: 158 LECDVFIGTGLVDMYCKMGHLDNARKVFDKMPGK--DVASWNAMISGLSQSSNPCEALEI 215
Query: 121 LKEMWVL-GLELSASTFVSV---------VSGCSFRQGISMHCCVYKLGLLNNEIPLANS 170
+ M + G+E + + +++ V C G + CV+ + ++NS
Sbjct: 216 FQRMQMEEGVEPDSVSILNLAPAVSRLEDVDSCKSIHGYVVRRCVFGV--------VSNS 267
Query: 171 VMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPD 230
++ MY+K G+V A IFD++ +SW T++ GYV+ G E L ++M+R + +
Sbjct: 268 LIDMYSKCGEVKLAHQIFDQMWVKDDISWATMMAGYVHHGCYFEVLQLLDEMKRKHIKMN 327
Query: 231 LVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFD 290
+ +N +L + +L +H+ L+ G ++ + +VSMY KCG+L+ A+ F
Sbjct: 328 KISVVNSVLAATETRDLEKGKEVHNYALQLGMTSDIVVATPIVSMYAKCGELKKAKEFFL 387
Query: 291 AVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSK 350
++ + + +W++ + Q GYP EA+++F+ + ++P++ L++ +SACAE+ S
Sbjct: 388 SLEGRDLVVWSAFLSALVQAGYPGEALSIFQEMQHEGLKPDKTILSSLVSACAEISSSRL 447
Query: 351 GKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAI 410
GK + Y++ + S+ V T+L+ M+++C A +F R+ KD+ W+ +ING+
Sbjct: 448 GKMMHCYVIKADMGSDISVATTLVSMYTRCKSFMYAMTLFNRMHYKDVVAWNTLINGFTK 507
Query: 411 HGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDD---GLSFFKSMQSNFGIE 467
G AL +F ++Q + G++PD+ S+LSAC+ ++DD G+ F ++ N GIE
Sbjct: 508 CGDPRLALEMFLRLQ-LSGVQPDSGTMVSLLSACA---LLDDLYLGICFHGNIIKN-GIE 562
Query: 468 PSIEHYLCLVDLLGRAGRFDLALKTIH 494
+ + L+D+ + G A H
Sbjct: 563 SEMHVKVALIDMYAKCGSLCTAENLFH 589
Score = 198 bits (504), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 113/354 (31%), Positives = 193/354 (54%), Gaps = 9/354 (2%)
Query: 97 SVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCS----FRQGISMH 152
S++ WNS+I A+SR L EAI + M +GLE TF V+ C+ F +G+++H
Sbjct: 91 SLILWNSLIRAYSRLHLFQEAIKSYQTMSYMGLEPDKYTFTFVLKACTGALDFHEGVAIH 150
Query: 153 CCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNV 212
+ L ++ + ++ MY K G ++ AR +FD++ + SW +I G N
Sbjct: 151 QDIASRE-LECDVFIGTGLVDMYCKMGHLDNARKVFDKMPGKDVASWNAMISGLSQSSNP 209
Query: 213 NEAFGLCNQMR-RMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNL 271
EA + +M+ V PD V LNL +++ ++ S+H +++ + N
Sbjct: 210 CEALEIFQRMQMEEGVEPDSVSILNLAPAVSRLEDVDSCKSIHGYVVRRCVFG--VVSNS 267
Query: 272 LVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPN 331
L+ MY+KCG+++LA ++FD + K W +M+ GY G E + L + + ++ N
Sbjct: 268 LIDMYSKCGEVKLAHQIFDQMWVKDDISWATMMAGYVHHGCYFEVLQLLDEMKRKHIKMN 327
Query: 332 EATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFE 391
+ ++ ++ A E L KGKE+ Y + G+ S+ V T ++ M++KCG + KAKE F
Sbjct: 328 KISVVNSVLAATETRDLEKGKEVHNYALQLGMTSDIVVATPIVSMYAKCGELKKAKEFFL 387
Query: 392 RVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACS 445
+ +DL VWSA ++ G +AL++F +MQH EGLKPD + +S++SAC+
Sbjct: 388 SLEGRDLVVWSAFLSALVQAGYPGEALSIFQEMQH-EGLKPDKTILSSLVSACA 440
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 101/408 (24%), Positives = 175/408 (42%), Gaps = 52/408 (12%)
Query: 169 NSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVT 228
N ++ ++A+ V + + I S++ W ++I Y + EA M M +
Sbjct: 66 NPLLQIHARL-IVQQCTLAPNSITNPSLILWNSLIRAYSRLHLFQEAIKSYQTMSYMGLE 124
Query: 229 PDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRV 288
PD F ++ C + +++H + + + LV MY K G L+ AR+V
Sbjct: 125 PDKYTFTFVLKACTGALDFHEGVAIHQDIASRELECDVFIGTGLVDMYCKMGHLDNARKV 184
Query: 289 FDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRL-LKTSVRPNEATLATTLSACAELGS 347
FD + K V W +MI G +Q P EA+ +F+R+ ++ V P+ ++ A + L
Sbjct: 185 FDKMPGKDVASWNAMISGLSQSSNPCEALEIFQRMQMEEGVEPDSVSILNLAPAVSRLED 244
Query: 348 LSKGKEIEEYIV---LNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAM 404
+ K I Y+V + G+ SN SLI M+SKCG + A ++F+++ KD W+ M
Sbjct: 245 VDSCKSIHGYVVRRCVFGVVSN-----SLIDMYSKCGEVKLAHQIFDQMWVKDDISWATM 299
Query: 405 INGYAIHGMGDQALNLFYKM--QHVE--------------------------------GL 430
+ GY HG + L L +M +H++ G+
Sbjct: 300 MAGYVHHGCYFEVLQLLDEMKRKHIKMNKISVVNSVLAATETRDLEKGKEVHNYALQLGM 359
Query: 431 KPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLAL 490
D VV T I+S + G + FF S++ + + + L +AG AL
Sbjct: 360 TSDIVVATPIVSMYAKCGELKKAKEFFLSLEGR-----DLVVWSAFLSALVQAGYPGEAL 414
Query: 491 KTIHEMPVE---VQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGS 535
EM E + + L+SAC + + LG+ ++ + GS
Sbjct: 415 SIFQEMQHEGLKPDKTILSSLVSACAEISSSRLGKMMHCYVIKADMGS 462
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/261 (26%), Positives = 129/261 (49%), Gaps = 12/261 (4%)
Query: 290 DAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLS 349
+++ S+ LW S+I Y++L EA+ ++ + + P++ T L AC
Sbjct: 85 NSITNPSLILWNSLIRAYSRLHLFQEAIKSYQTMSYMGLEPDKYTFTFVLKACTGALDFH 144
Query: 350 KGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYA 409
+G I + I LE + + T L+ M+ K G ++ A++VF+++P KD+A W+AMI+G +
Sbjct: 145 EGVAIHQDIASRELECDVFIGTGLVDMYCKMGHLDNARKVFDKMPGKDVASWNAMISGLS 204
Query: 410 IHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSF--FKSMQSNFGIE 467
+AL +F +MQ EG++PD+V ++ A S VD S + + FG+
Sbjct: 205 QSSNPCEALEIFQRMQMEEGVEPDSVSILNLAPAVSRLEDVDSCKSIHGYVVRRCVFGVV 264
Query: 468 PSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKH----HNVELGEY 523
+ L+D+ + G LA + +M V+ WA +++ + H ++L +
Sbjct: 265 SN-----SLIDMYSKCGEVKLAHQIFDQMWVKDDIS-WATMMAGYVHHGCYFEVLQLLDE 318
Query: 524 AAKNLLTLNPGSTGNYILMAN 544
+ + +N S N +L A
Sbjct: 319 MKRKHIKMNKISVVNSVLAAT 339
>gi|357167803|ref|XP_003581340.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g63370-like [Brachypodium distachyon]
Length = 940
Score = 340 bits (871), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 200/622 (32%), Positives = 330/622 (53%), Gaps = 11/622 (1%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI NG F + L + M + + NS+T VL+ C + + G+ +H+ +LK G
Sbjct: 237 MISGCLQNGMFLQALDLFRGMQRAVLSMNSYTTVGVLQVCTELAQLNLGRELHAALLKSG 296
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+ + L+ MY+KC S+ +V E + + +SWNS++S + + L EAI
Sbjct: 297 SEVNIQCNALLV-MYTKCGRVDSALRVFRE--IDEKDYISWNSMLSCYVQNGLYAEAIEF 353
Query: 121 LKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
+ EM G + + VS+ S G +H K L+++ + N++M MY
Sbjct: 354 ISEMLRGGFQPDHACIVSLSSAVGHLGWLLNGKEVHAYAIK-QRLDSDTQVGNTLMDMYM 412
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K + + +FD + +SWTTII Y EA + + ++ + D ++ +
Sbjct: 413 KCRYIEYSAHVFDRMRIKDHISWTTIITCYAQSSRHIEALEIFREAQKEGIKVDPMMIGS 472
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
++ C+ + + LA +H +++G + + N ++ +Y +CG++ + ++F+ V +K
Sbjct: 473 ILEACSGLETILLAKQLHCYAIRNGLLDL-VVKNRIIDIYGECGEVYHSLKMFETVEQKD 531
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEE 356
+ WTSMI YA G +EA+ LF + T V+P+ L + L A L SL+KGKE+
Sbjct: 532 IVTWTSMINCYANSGLLNEALVLFAEMQSTDVQPDSVALVSILGAIGGLSSLAKGKEVHG 591
Query: 357 YIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQ 416
+++ + +SL+ M+S CG ++ A +VF V KD+ +W+AMIN +HG G Q
Sbjct: 592 FLIRRNFHMEEAIVSSLVDMYSGCGSLSGALKVFNAVKCKDMVLWTAMINATGMHGHGKQ 651
Query: 417 ALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCL 476
A++LF +M G+ PD V + ++L ACSHS +V++G + M S + +EP EHY C+
Sbjct: 652 AIDLFKRMLQT-GVTPDHVSFLALLYACSHSKLVNEGKCYLDMMMSTYRLEPWQEHYACV 710
Query: 477 VDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGST 536
VDLLGR+G+ + A + I MP++ ++ VW LL AC H N EL AA LL L P +
Sbjct: 711 VDLLGRSGQTEEAYEFIKSMPLKPKSVVWCSLLGACRVHKNHELAVVAANRLLELEPDNP 770
Query: 537 GNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSV 596
GNY+L++N+F G W A R + +R L K+P S +EI +V F D SH +
Sbjct: 771 GNYVLVSNVFAEMGKWNNAKEVRARISERGLRKDPACSWIEIGNNVHTFTTRDNSHRDAE 830
Query: 597 DIRKTLKELHIKLL-EAGYIAE 617
I L E+ +L E GY +
Sbjct: 831 RINLKLAEITERLRKEGGYTED 852
Score = 199 bits (507), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 150/518 (28%), Positives = 254/518 (49%), Gaps = 18/518 (3%)
Query: 7 NNGSFEETLSTYSSM---LQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQ 63
++GS E L Y +M +GV + T VLKA G VH +K G +
Sbjct: 138 SSGSACEALGVYRAMRLSAASGVAPDGCTLASVLKASGVEGDGRCGCEVHGLAVKHGLDR 197
Query: 64 DAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKE 123
FV LI MY+KC S+ +V + M R V SWNS+IS + + +A+ + +
Sbjct: 198 STFVANALIAMYAKCGILDSAMRVFELMH-DGRDVASWNSMISGCLQNGMFLQALDLFRG 256
Query: 124 MWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPL-ANSVMSMYAKF 178
M L +++ T V V+ C+ G +H + K G +E+ + N+++ MY K
Sbjct: 257 MQRAVLSMNSYTTVGVLQVCTELAQLNLGRELHAALLKSG---SEVNIQCNALLVMYTKC 313
Query: 179 GKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLI 238
G+V+ A +F EI E +SW +++ YV G EA ++M R PD ++L
Sbjct: 314 GRVDSALRVFREIDEKDYISWNSMLSCYVQNGLYAEAIEFISEMLRGGFQPDHACIVSLS 373
Query: 239 LGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVF 298
+G L +H+ +K +++ + N L+ MY KC +E + VFD + K
Sbjct: 374 SAVGHLGWLLNGKEVHAYAIKQRLDSDTQVGNTLMDMYMKCRYIEYSAHVFDRMRIKDHI 433
Query: 299 LWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYI 358
WT++I YAQ EA+ +F+ K ++ + + + L AC+ L ++ K++ Y
Sbjct: 434 SWTTIITCYAQSSRHIEALEIFREAQKEGIKVDPMMIGSILEACSGLETILLAKQLHCYA 493
Query: 359 VLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQAL 418
+ NGL + V+ +I ++ +CG + + ++FE V KD+ W++MIN YA G+ ++AL
Sbjct: 494 IRNGL-LDLVVKNRIIDIYGECGEVYHSLKMFETVEQKDIVTWTSMINCYANSGLLNEAL 552
Query: 419 NLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSM-QSNFGIEPSIEHYLCLV 477
LF +MQ + ++PD+V SIL A + G + + NF +E +I LV
Sbjct: 553 VLFAEMQSTD-VQPDSVALVSILGAIGGLSSLAKGKEVHGFLIRRNFHMEEAI--VSSLV 609
Query: 478 DLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKH 515
D+ G ALK + + + +W +++A H
Sbjct: 610 DMYSGCGSLSGALKVFNAVKCK-DMVLWTAMINATGMH 646
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 134/420 (31%), Positives = 214/420 (50%), Gaps = 15/420 (3%)
Query: 36 VLKACANINSIWDGKRVHSHVLKVGFQQ--DAFVQTGLIDMYSKCSDFVSSRKVLDEMPV 93
VL A ++ G +VH+H + G + D F+ T L+ MY KC +R + D M
Sbjct: 64 VLDLVAAKKAVAQGVQVHAHAVATGSLEGDDGFLATKLLFMYGKCGRVADARLLFDGMSS 123
Query: 94 RLRSVVSWNSIISAHSRACLNDEAILVLKEMWV---LGLELSASTFVSVVSGCSF----R 146
R+V SWN++I A+ + EA+ V + M + G+ T SV+ R
Sbjct: 124 --RTVFSWNALIGAYLSSGSACEALGVYRAMRLSAASGVAPDGCTLASVLKASGVEGDGR 181
Query: 147 QGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGE-TSIVSWTTIIGG 205
G +H K G L+ +AN++++MYAK G ++ A +F+ + + + SW ++I G
Sbjct: 182 CGCEVHGLAVKHG-LDRSTFVANALIAMYAKCGILDSAMRVFELMHDGRDVASWNSMISG 240
Query: 206 YVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNE 265
+ G +A L M+R ++ + + ++ C ++ L L +H+ LLKSG
Sbjct: 241 CLQNGMFLQALDLFRGMQRAVLSMNSYTTVGVLQVCTELAQLNLGRELHAALLKSGSEVN 300
Query: 266 DPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLK 325
+ LLV MYTKCG ++ A RVF + EK W SM+ Y Q G +EA+ +L+
Sbjct: 301 IQCNALLV-MYTKCGRVDSALRVFREIDEKDYISWNSMLSCYVQNGLYAEAIEFISEMLR 359
Query: 326 TSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINK 385
+P+ A + + SA LG L GKE+ Y + L+S+ QV +L+ M+ KC I
Sbjct: 360 GGFQPDHACIVSLSSAVGHLGWLLNGKEVHAYAIKQRLDSDTQVGNTLMDMYMKCRYIEY 419
Query: 386 AKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACS 445
+ VF+R+ KD W+ +I YA +AL +F + Q EG+K D ++ SIL ACS
Sbjct: 420 SAHVFDRMRIKDHISWTTIITCYAQSSRHIEALEIFREAQK-EGIKVDPMMIGSILEACS 478
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 102/334 (30%), Positives = 169/334 (50%), Gaps = 16/334 (4%)
Query: 125 WVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGLLNNEIP-LANSVMSMYAKFGKVNE 183
WVL L V + + QG+ +H G L + LA ++ MY K G+V +
Sbjct: 63 WVLDL---------VAAKKAVAQGVQVHAHAVATGSLEGDDGFLATKLLFMYGKCGRVAD 113
Query: 184 ARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMS---VTPDLVVFLNLILG 240
AR +FD + ++ SW +IG Y++ G+ EA G+ MR + V PD +++
Sbjct: 114 ARLLFDGMSSRTVFSWNALIGAYLSSGSACEALGVYRAMRLSAASGVAPDGCTLASVLKA 173
Query: 241 CAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLE-KSVFL 299
G+ +H L +K G + + N L++MY KCG L+ A RVF+ + + + V
Sbjct: 174 SGVEGDGRCGCEVHGLAVKHGLDRSTFVANALIAMYAKCGILDSAMRVFELMHDGRDVAS 233
Query: 300 WTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIV 359
W SMI G Q G +A++LF+ + + + N T L C EL L+ G+E+ ++
Sbjct: 234 WNSMISGCLQNGMFLQALDLFRGMQRAVLSMNSYTTVGVLQVCTELAQLNLGRELHAALL 293
Query: 360 LNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALN 419
+G E N Q L+ M++KCGR++ A VF + +KD W++M++ Y +G+ +A+
Sbjct: 294 KSGSEVNIQCNALLV-MYTKCGRVDSALRVFREIDEKDYISWNSMLSCYVQNGLYAEAIE 352
Query: 420 LFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDG 453
+M G +PD S+ SA H G + +G
Sbjct: 353 FISEMLR-GGFQPDHACIVSLSSAVGHLGWLLNG 385
>gi|297816638|ref|XP_002876202.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297322040|gb|EFH52461.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 769
Score = 340 bits (871), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 201/619 (32%), Positives = 330/619 (53%), Gaps = 14/619 (2%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+I + NG E ++ Y MLQ + + F F ++KACA + GK++H+ V+K+
Sbjct: 136 VITGYSQNGQEAEAITLYLKMLQADLVPDQFAFGSIIKACACAGDVVLGKQLHAQVIKLE 195
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
Q LI MY + + + KV +P + ++SW+SII+ S+ EA+
Sbjct: 196 SSSHLIAQNALIAMYVRFNQMSDASKVFYGIPAK--DLISWSSIIAGFSQLGFEFEALSH 253
Query: 121 LKEMWVLGL-ELSASTFVSVVSGCS--FRQ--GISMHCCVYKLGLLNNEIPLANSVMSMY 175
LKEM G+ + F S + CS R G +H KL L N I S+ MY
Sbjct: 254 LKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKLELTGNAIA-GCSLCDMY 312
Query: 176 AKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFL 235
A+ G ++ AR +F++I SW II G N G +EA + ++MR PD +
Sbjct: 313 ARCGFLDSARRVFNQIERPDTASWNVIIAGLANNGYADEAVSVFSEMRNSGFIPDAISLR 372
Query: 236 NLILGCAQVGNLFLA--LSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVL 293
+L+ CAQ + L + +HS ++K G+ + + N L++MYT C DL +F+
Sbjct: 373 SLL--CAQTKPMALCQGMQIHSFIIKCGFLADLSVCNSLLTMYTFCSDLYCCFNLFEDFR 430
Query: 294 EKSVFL-WTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGK 352
K+ + W +++ Q P E + LFK +L + P+ T+ L C E+ SL G
Sbjct: 431 NKADSVSWNAILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGS 490
Query: 353 EIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHG 412
++ Y GL + ++ LI M++KCG + +A+ +F+ + + D+ WS +I GYA G
Sbjct: 491 QVHCYSWKTGLVLEQFIKNGLIDMYAKCGSLRQARRIFDSMDNGDVVSWSTLIVGYAQSG 550
Query: 413 MGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEH 472
G++AL LF +M+ G++P+ V + +L+ACSH G+V++GL + MQ+ GI P+ EH
Sbjct: 551 FGEEALILFREMKS-SGIEPNHVTFVGVLTACSHVGLVEEGLKLYAIMQTEHGISPTKEH 609
Query: 473 YLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLN 532
C+VDLL RAG + A + I EM +E VW LLSAC NV+L + AA+N+L ++
Sbjct: 610 CSCVVDLLARAGHLNEAERFIDEMKLEPDVVVWKTLLSACKTQGNVDLAQKAAENILKID 669
Query: 533 PGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSH 592
P ++ ++L+ ++ S+G W++AA R M + K PG S ++++ + +F A D H
Sbjct: 670 PFNSTAHVLLCSMHASSGNWEDAALLRSSMKKHDVKKIPGQSWIDVEDKIHIFFAEDVLH 729
Query: 593 HLSVDIRKTLKELHIKLLE 611
DI L + ++L+
Sbjct: 730 PERDDIYTVLHNIWSQMLD 748
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 98/314 (31%), Positives = 169/314 (53%), Gaps = 7/314 (2%)
Query: 135 TFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDE 190
T++S++ CS QG +H + + I L N ++SMY K G + +AR +FD
Sbjct: 66 TYISLICACSSSRSLAQGRKIHDHILNSNCKYDTI-LNNHILSMYGKCGSLRDAREVFDF 124
Query: 191 IGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLA 250
+ E ++VS+T++I GY G EA L +M + + PD F ++I CA G++ L
Sbjct: 125 MPERNLVSYTSVITGYSQNGQEAEAITLYLKMLQADLVPDQFAFGSIIKACACAGDVVLG 184
Query: 251 LSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQL 310
+H+ ++K ++ N L++MY + + A +VF + K + W+S+I G++QL
Sbjct: 185 KQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASKVFYGIPAKDLISWSSIIAGFSQL 244
Query: 311 GYPSEAVNLFKRLLKTSV-RPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQV 369
G+ EA++ K +L V PNE ++L AC+ L G +I + L N
Sbjct: 245 GFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKLELTGNAIA 304
Query: 370 QTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEG 429
SL M+++CG ++ A+ VF ++ D A W+ +I G A +G D+A+++F +M++ G
Sbjct: 305 GCSLCDMYARCGFLDSARRVFNQIERPDTASWNVIIAGLANNGYADEAVSVFSEMRN-SG 363
Query: 430 LKPDAVVYTSILSA 443
PDA+ S+L A
Sbjct: 364 FIPDAISLRSLLCA 377
Score = 165 bits (418), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 118/446 (26%), Positives = 210/446 (47%), Gaps = 25/446 (5%)
Query: 5 STNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQD 64
+ N SF+ L TY S++ AC++ S+ G+++H H+L + D
Sbjct: 54 AQKNSSFKIRLRTYISLI---------------CACSSSRSLAQGRKIHDHILNSNCKYD 98
Query: 65 AFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEM 124
+ ++ MY KC +R+V D MP R++VS+ S+I+ +S+ EAI + +M
Sbjct: 99 TILNNHILSMYGKCGSLRDAREVFDFMPE--RNLVSYTSVITGYSQNGQEAEAITLYLKM 156
Query: 125 WVLGLELSASTFVSVVSGCSFRQ----GISMHCCVYKLGLLNNEIPLANSVMSMYAKFGK 180
L F S++ C+ G +H V KL ++ I N++++MY +F +
Sbjct: 157 LQADLVPDQFAFGSIIKACACAGDVVLGKQLHAQVIKLESSSHLIA-QNALIAMYVRFNQ 215
Query: 181 VNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSV-TPDLVVFLNLIL 239
+++A +F I ++SW++II G+ +G EA +M V P+ +F + +
Sbjct: 216 MSDASKVFYGIPAKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLK 275
Query: 240 GCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFL 299
C+ + +H L +K L MY +CG L+ ARRVF+ +
Sbjct: 276 ACSSLLRPDYGSQIHGLCIKLELTGNAIAGCSLCDMYARCGFLDSARRVFNQIERPDTAS 335
Query: 300 WTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIV 359
W +I G A GY EAV++F + + P+ +L + L A + +L +G +I +I+
Sbjct: 336 WNVIIAGLANNGYADEAVSVFSEMRNSGFIPDAISLRSLLCAQTKPMALCQGMQIHSFII 395
Query: 360 LNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDK-DLAVWSAMINGYAIHGMGDQAL 418
G ++ V SL+ M++ C + +FE +K D W+A++ H + L
Sbjct: 396 KCGFLADLSVCNSLLTMYTFCSDLYCCFNLFEDFRNKADSVSWNAILTACLQHEQPVEML 455
Query: 419 NLFYKMQHVEGLKPDAVVYTSILSAC 444
LF K+ V +PD + ++L C
Sbjct: 456 RLF-KLMLVSECEPDHITMGNLLRGC 480
Score = 123 bits (308), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 70/232 (30%), Positives = 125/232 (53%), Gaps = 2/232 (0%)
Query: 214 EAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLV 273
EAF + + L +++LI C+ +L +H +L S + L+N ++
Sbjct: 49 EAFDFAQKNSSFKIR--LRTYISLICACSSSRSLAQGRKIHDHILNSNCKYDTILNNHIL 106
Query: 274 SMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEA 333
SMY KCG L AR VFD + E+++ +TS+I GY+Q G +EA+ L+ ++L+ + P++
Sbjct: 107 SMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQEAEAITLYLKMLQADLVPDQF 166
Query: 334 TLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERV 393
+ + ACA G + GK++ ++ S+ Q +LI M+ + +++ A +VF +
Sbjct: 167 AFGSIIKACACAGDVVLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASKVFYGI 226
Query: 394 PDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACS 445
P KDL WS++I G++ G +AL+ +M P+ ++ S L ACS
Sbjct: 227 PAKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACS 278
>gi|359481906|ref|XP_003632690.1| PREDICTED: pentatricopeptide repeat-containing protein At2g35030,
mitochondrial-like [Vitis vinifera]
Length = 635
Score = 340 bits (871), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 203/624 (32%), Positives = 330/624 (52%), Gaps = 57/624 (9%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI N + +G E + M + V T+ V+ I + +R+ +V
Sbjct: 58 MITNLSKDGRIMEARRLFDEMREPDV----ITWTTVISGYIKCGMIEEARRLFD---RVD 110
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+++ T ++ Y + + + K+ +EMP + +VVSWN++I +++ D A+ +
Sbjct: 111 AKKNVVTWTAMVGGYIRSNKISDAEKLFNEMPNK--NVVSWNTMIDGYAQNGRIDSAMYL 168
Query: 121 LKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGK 180
++M +VVS N+VMSM A+ G+
Sbjct: 169 FEKM----------PERNVVSW--------------------------NTVMSMLAQCGR 192
Query: 181 VNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILG 240
+ EAR +FD + E ++SWT +I G G ++EA L ++M +V V + +I G
Sbjct: 193 IEEARRLFDRMPERDVISWTAMIAGLSKNGRIDEARLLFDRMPERNV----VSWNAMITG 248
Query: 241 CAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLW 300
AQ L AL + + + P N +++ + GDL AR++F+ + +K+V W
Sbjct: 249 YAQNLRLDEALDLFERMPERDL----PSWNTMITGLIQNGDLRRARKLFNEMPKKNVISW 304
Query: 301 TSMIGGYAQLGYPSEAVNLFKRLLKTS-VRPNEATLATTLSACAELGSLSKGKEIEEYIV 359
T+MI G Q G EA+ +F R+L T+ +PN+ T + L AC+ L L +G+++ + I
Sbjct: 305 TTMITGCVQEGESEEALKIFSRMLSTNGAKPNQGTFVSVLGACSNLAGLGEGQQVHQIIS 364
Query: 360 LNGLESNRQVQTSLIHMFSKCGRINKAKEVFER--VPDKDLAVWSAMINGYAIHGMGDQA 417
+ + V ++LI+M+SKCG + A+++F+ +DL W+ +I YA HG G +A
Sbjct: 365 KTVYQDSTFVVSALINMYSKCGELGTARKMFDDGMTSQRDLVSWNGIIAAYAHHGYGKEA 424
Query: 418 LNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLV 477
+N F +M+ G KPD V Y +LSACSH+G+V++GL +F + + I +HY CLV
Sbjct: 425 INFFKEMRK-SGFKPDDVTYVGLLSACSHAGLVEEGLKYFDELVKDRSILVREDHYACLV 483
Query: 478 DLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTG 537
DL GRAGR A I + + A+VW LL+ C H NV++G+ AAK LL + P + G
Sbjct: 484 DLCGRAGRLKEAFGFIERLETKPSARVWGALLAGCNVHANVKIGKQAAKKLLEVEPENAG 543
Query: 538 NYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVD 597
Y+L++N++ S G W+EAA R M D+ L K+PG S +E+ V VFV GD+SH S
Sbjct: 544 TYLLLSNIYASTGKWREAARVRLKMKDKGLKKQPGCSWIEVGNRVHVFVVGDKSHSQSKL 603
Query: 598 IRKTLKELHIKLLEAGYIAEADIV 621
I L++LH K+ +AGY D +
Sbjct: 604 IYSLLRDLHSKMKKAGYEPNNDFI 627
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 84/320 (26%), Positives = 157/320 (49%), Gaps = 38/320 (11%)
Query: 161 LNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCN 220
++ + N +++ +K G++ EAR +FDE+ E +++WTT+I GY+ G + EA L +
Sbjct: 48 VDGNVARCNWMITNLSKDGRIMEARRLFDEMREPDVITWTTVISGYIKCGMIEEARRLFD 107
Query: 221 QMRRMSVTPDLVVFLNLILG------CAQVGNLFLALSMHSLL----LKSGYNNEDPLD- 269
R+ ++V + ++ G + LF + +++ + GY +D
Sbjct: 108 ---RVDAKKNVVTWTAMVGGYIRSNKISDAEKLFNEMPNKNVVSWNTMIDGYAQNGRIDS 164
Query: 270 ----------------NLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYP 313
N ++SM +CG +E ARR+FD + E+ V WT+MI G ++ G
Sbjct: 165 AMYLFEKMPERNVVSWNTVMSMLAQCGRIEEARRLFDRMPERDVISWTAMIAGLSKNGRI 224
Query: 314 SEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSL 373
EA LF R+ + +V + ++ A+ L + ++ E + L S + T L
Sbjct: 225 DEARLLFDRMPERNV----VSWNAMITGYAQNLRLDEALDLFERMPERDLPSWNTMITGL 280
Query: 374 IHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPD 433
I + G + +A+++F +P K++ W+ MI G G ++AL +F +M G KP+
Sbjct: 281 I----QNGDLRRARKLFNEMPKKNVISWTTMITGCVQEGESEEALKIFSRMLSTNGAKPN 336
Query: 434 AVVYTSILSACSHSGMVDDG 453
+ S+L ACS+ + +G
Sbjct: 337 QGTFVSVLGACSNLAGLGEG 356
>gi|356537365|ref|XP_003537198.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49740-like [Glycine max]
Length = 722
Score = 339 bits (870), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 196/580 (33%), Positives = 322/580 (55%), Gaps = 10/580 (1%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWD-GKRVHSHVLKV 59
+I G+ + + M + GV + +TF +L C+ ++D G+ VHS V+K
Sbjct: 149 VITGCAEKGNRDFAFGLFRDMNKMGVKADKYTFATMLSLCSL--ELFDYGRHVHSVVIKS 206
Query: 60 GFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVR-LRSVVSWNSIISAHSRACLNDEAI 118
GF V LI MY KC V + +V +E R VS+N++I + +++A
Sbjct: 207 GFLGWTSVVNSLITMYFKCGCVVDACEVFEEAEEGGSRDYVSYNAMIDGFASVERSEDAF 266
Query: 119 LVLKEMWVLGLELSASTFVSVVSGCS-FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAK 177
L+ ++M + + TFVSV+S CS R G K+G + + + N++M+MY+
Sbjct: 267 LIFRDMQKGCFDPTEVTFVSVMSSCSSLRAGCQAQSQAIKMGFVGC-VAVNNAMMTMYSG 325
Query: 178 FGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNL 237
FG+V E ++IF+ + E +VSW ++ ++ EA +MRR + PD + +L
Sbjct: 326 FGEVIEVQNIFEGMEERDVVSWNIMVSMFLQENLEEEAMLSYLKMRREGIEPDEFTYGSL 385
Query: 238 ILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSV 297
+ A +L + +HSLL KSG + L N LVS Y + G ++ A ++F V KS+
Sbjct: 386 L---AATDSLQVVEMIHSLLCKSGLVKIEVL-NALVSAYCRHGKIKRAFQIFSGVPYKSL 441
Query: 298 FLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEY 357
W S+I G+ G+P + + F LL T V+PN +L+ LS C+ + ++S GK++ Y
Sbjct: 442 ISWNSIISGFLMNGHPLQGLEQFSALLSTQVKPNAYSLSLVLSICSSMSAMSHGKQVHGY 501
Query: 358 IVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQA 417
I+ +G S + +L+ M++KCG ++KA VF+ + ++D W+A+I+ YA HG G++A
Sbjct: 502 ILRHGFSSEVSLGNALVTMYAKCGSLDKALRVFDAMVERDTITWNAIISAYAQHGRGEEA 561
Query: 418 LNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLV 477
+ F MQ G+KPD +TS+LSACSH+G+VDDG+ F +M +G PS++H+ C+V
Sbjct: 562 VCCFEAMQTSPGIKPDQATFTSVLSACSHAGLVDDGIRIFDTMVKVYGFVPSVDHFSCIV 621
Query: 478 DLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTG 537
DLLGR+G D A + I + + L SAC H N+ LG A+ +L + +
Sbjct: 622 DLLGRSGYLDEAERVIKSGYFGAHSNICWSLFSACAAHGNLGLGRTVARLILERDHNNPS 681
Query: 538 NYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVE 577
Y+L++N+ +AG W+EAA R +M + K+PG S +
Sbjct: 682 VYVLLSNICAAAGQWEEAANLREMMREFGTIKQPGCSWIR 721
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 121/470 (25%), Positives = 227/470 (48%), Gaps = 25/470 (5%)
Query: 57 LKVGFQQ----DAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRAC 112
+K+ FQ+ DA+ T L+ +K + KV D +P + WN++I+ +
Sbjct: 100 VKLTFQEIDCPDAYSWTTLLSACAKLDSVEHALKVFDGIPKG--HIAVWNAVITGCAEKG 157
Query: 113 LNDEAILVLKEMWVLGLELSASTFVSVVSGCS---FRQGISMHCCVYKLGLLNNEIPLAN 169
D A + ++M +G++ TF +++S CS F G +H V K G L + N
Sbjct: 158 NRDFAFGLFRDMNKMGVKADKYTFATMLSLCSLELFDYGRHVHSVVIKSGFL-GWTSVVN 216
Query: 170 SVMSMYAKFGKVNEARSIFDEI---GETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMS 226
S+++MY K G V +A +F+E G VS+ +I G+ +V +AF + M++
Sbjct: 217 SLITMYFKCGCVVDACEVFEEAEEGGSRDYVSYNAMIDGFASVERSEDAFLIFRDMQKGC 276
Query: 227 VTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELAR 286
P V F++++ C+ +L S +K G+ ++N +++MY+ G++ +
Sbjct: 277 FDPTEVTFVSVMSSCS---SLRAGCQAQSQAIKMGFVGCVAVNNAMMTMYSGFGEVIEVQ 333
Query: 287 RVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELG 346
+F+ + E+ V W M+ + Q EA+ + ++ + + P+E T + L+A
Sbjct: 334 NIFEGMEERDVVSWNIMVSMFLQENLEEEAMLSYLKMRREGIEPDEFTYGSLLAA---TD 390
Query: 347 SLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMIN 406
SL + I + +GL +V +L+ + + G+I +A ++F VP K L W+++I+
Sbjct: 391 SLQVVEMIHSLLCKSGL-VKIEVLNALVSAYCRHGKIKRAFQIFSGVPYKSLISWNSIIS 449
Query: 407 GYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKS-MQSNFG 465
G+ ++G Q L F + + +KP+A + +LS CS + G ++ F
Sbjct: 450 GFLMNGHPLQGLEQFSALLSTQ-VKPNAYSLSLVLSICSSMSAMSHGKQVHGYILRHGFS 508
Query: 466 IEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKH 515
E S+ + LV + + G D AL+ M VE W ++SA +H
Sbjct: 509 SEVSLGN--ALVTMYAKCGSLDKALRVFDAM-VERDTITWNAIISAYAQH 555
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 112/255 (43%), Gaps = 37/255 (14%)
Query: 226 SVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTK------- 278
S TPD + I A +H+L +++G + N L+S+Y K
Sbjct: 40 SFTPDHYILSTAITAAANARRAAFGAQLHALAVRTGLGAHSHVANSLLSLYAKAHRDLAS 99
Query: 279 ---------CGD----------------LELARRVFDAVLEKSVFLWTSMIGGYAQLGYP 313
C D +E A +VFD + + + +W ++I G A+ G
Sbjct: 100 VKLTFQEIDCPDAYSWTTLLSACAKLDSVEHALKVFDGIPKGHIAVWNAVITGCAEKGNR 159
Query: 314 SEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSL 373
A LF+ + K V+ ++ T AT LS C+ L G+ + ++ +G V SL
Sbjct: 160 DFAFGLFRDMNKMGVKADKYTFATMLSLCS-LELFDYGRHVHSVVIKSGFLGWTSVVNSL 218
Query: 374 IHMFSKCGRINKAKEVFERVPD---KDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGL 430
I M+ KCG + A EVFE + +D ++AMI+G+A + A +F MQ
Sbjct: 219 ITMYFKCGCVVDACEVFEEAEEGGSRDYVSYNAMIDGFASVERSEDAFLIFRDMQK-GCF 277
Query: 431 KPDAVVYTSILSACS 445
P V + S++S+CS
Sbjct: 278 DPTEVTFVSVMSSCS 292
>gi|356518183|ref|XP_003527761.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
[Glycine max]
Length = 1582
Score = 339 bits (870), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 198/618 (32%), Positives = 328/618 (53%), Gaps = 9/618 (1%)
Query: 9 GSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQ 68
G E + + M+ + V + TF ++L A +N + GK++H V++ G Q V
Sbjct: 885 GETWEAVDCFVDMINSRVACDGLTFVVMLSVVAGLNCLELGKQIHGIVVRSGLDQVVSVG 944
Query: 69 TGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLG 128
LI+MY K +R V +M +VSWN++IS + + L + ++ + ++ G
Sbjct: 945 NCLINMYVKTGSVSRARTVFWQM--NEVDLVSWNTMISGCALSGLEECSVGMFVDLLRGG 1002
Query: 129 LELSASTFVSVVSGCSFRQG-----ISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNE 183
L T SV+ CS G +H C K G++ + ++ +++ +Y+K GK+ E
Sbjct: 1003 LLPDQFTVASVLRACSSLGGGCHLATQIHACAMKAGVVLDSF-VSTTLIDVYSKSGKMEE 1061
Query: 184 ARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQ 243
A +F + SW ++ GY+ G+ +A L M+ + + N
Sbjct: 1062 AEFLFVNQDGFDLASWNAMMHGYIVSGDFPKALRLYILMQESGERANQITLANAAKAAGG 1121
Query: 244 VGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSM 303
+ L + ++++K G+N + + + ++ MY KCG++E ARR+F+ + WT+M
Sbjct: 1122 LVGLKQGKQIQAVVVKRGFNLDLFVISGVLDMYLKCGEMESARRIFNEIPSPDDVAWTTM 1181
Query: 304 IGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGL 363
I G + G A+ + + + V+P+E T AT + AC+ L +L +G++I V
Sbjct: 1182 ISGCVENGQEEHALFTYHHMRLSKVQPDEYTFATLVKACSLLTALEQGRQIHANTVKLNC 1241
Query: 364 ESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYK 423
+ V TSL+ M++KCG I A+ +F+R +A W+AMI G A HG ++AL F +
Sbjct: 1242 AFDPFVMTSLVDMYAKCGNIEDARGLFKRTNTSRIASWNAMIVGLAQHGNAEEALQFFEE 1301
Query: 424 MQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRA 483
M+ G+ PD V + +LSACSHSG+V + F SMQ +GIEP IEHY CLVD L RA
Sbjct: 1302 MKS-RGVTPDRVTFIGVLSACSHSGLVSEAYENFYSMQKIYGIEPEIEHYSCLVDALSRA 1360
Query: 484 GRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMA 543
GR A K I MP E A ++ LL+AC + E G+ A+ LL L P + Y+L++
Sbjct: 1361 GRIREAEKVISSMPFEASASMYRTLLNACRVQVDRETGKRVAEKLLALEPSDSAAYVLLS 1420
Query: 544 NLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLK 603
N++ +A W+ A+AR +M + K+PG+S V++ V +FVAGDRSH + I ++
Sbjct: 1421 NVYAAANQWENVASARNMMRKANVKKDPGFSWVDLKNKVHLFVAGDRSHEETDVIYNKVE 1480
Query: 604 ELHIKLLEAGYIAEADIV 621
+ ++ E GY+ + D
Sbjct: 1481 YIMKRIREEGYLPDTDFA 1498
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 118/402 (29%), Positives = 190/402 (47%), Gaps = 27/402 (6%)
Query: 49 GKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAH 108
GKR H+ +L G D F+ LI MYSKC S+RK+ D P R +V+WN+I+SAH
Sbjct: 645 GKRAHARILTSGHHPDRFLTNNLITMYSKCGSLSSARKLFDTTPDTSRDLVTWNAILSAH 704
Query: 109 SRACLNDEAIL-VLKEMWVLGLELS-ASTFVSVVSGCSFRQGISMHCCVYKLGLLNNEIP 166
+ + + +L+ +V + A F + S S+H K+G L ++
Sbjct: 705 ADKARDGFHLFRLLRRSFVSATRHTLAPVFKMCLLSASPSAAESLHGYAVKIG-LQWDVF 763
Query: 167 LANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMS 226
+A +++++YAKFG++ EAR +FD +G +V W ++ YV+ G EA L ++ R
Sbjct: 764 VAGALVNIYAKFGRIREARVLFDGMGLRDVVLWNVMMKAYVDTGLEYEALLLFSEFNRTG 823
Query: 227 VTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELAR 286
+ PD V L N+ L + L Y + L + G
Sbjct: 824 LRPDDVTLCTLARVVKSKQNV-LEWQLKQL---KAYGTK-----LFMYDDDDDG------ 868
Query: 287 RVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELG 346
V W + + Q G EAV+ F ++ + V + T LS A L
Sbjct: 869 --------SDVIAWNKTLSWFLQRGETWEAVDCFVDMINSRVACDGLTFVVMLSVVAGLN 920
Query: 347 SLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMIN 406
L GK+I +V +GL+ V LI+M+ K G +++A+ VF ++ + DL W+ MI+
Sbjct: 921 CLELGKQIHGIVVRSGLDQVVSVGNCLINMYVKTGSVSRARTVFWQMNEVDLVSWNTMIS 980
Query: 407 GYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSG 448
G A+ G+ + ++ +F + GL PD S+L ACS G
Sbjct: 981 GCALSGLEECSVGMFVDLLR-GGLLPDQFTVASVLRACSSLG 1021
Score = 145 bits (367), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 109/400 (27%), Positives = 189/400 (47%), Gaps = 9/400 (2%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWD-GKRVHSHVLKV 59
MI +G E ++ + +L+ G+ + FT VL+AC+++ ++H+ +K
Sbjct: 978 MISGCALSGLEECSVGMFVDLLRGGLLPDQFTVASVLRACSSLGGGCHLATQIHACAMKA 1037
Query: 60 GFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAI- 118
G D+FV T LID+YSK + + + + SWN+++ + + +A+
Sbjct: 1038 GVVLDSFVSTTLIDVYSKSGKMEEAEFLF--VNQDGFDLASWNAMMHGYIVSGDFPKALR 1095
Query: 119 --LVLKEMWVLGLELSASTFVSVVSG-CSFRQGISMHCCVYKLGLLNNEIPLANSVMSMY 175
++++E +++ + G +QG + V K G N ++ + + V+ MY
Sbjct: 1096 LYILMQESGERANQITLANAAKAAGGLVGLKQGKQIQAVVVKRG-FNLDLFVISGVLDMY 1154
Query: 176 AKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFL 235
K G++ AR IF+EI V+WTT+I G V G A + MR V PD F
Sbjct: 1155 LKCGEMESARRIFNEIPSPDDVAWTTMISGCVENGQEEHALFTYHHMRLSKVQPDEYTFA 1214
Query: 236 NLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEK 295
L+ C+ + L +H+ +K + + LV MY KCG++E AR +F
Sbjct: 1215 TLVKACSLLTALEQGRQIHANTVKLNCAFDPFVMTSLVDMYAKCGNIEDARGLFKRTNTS 1274
Query: 296 SVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKE-I 354
+ W +MI G AQ G EA+ F+ + V P+ T LSAC+ G +S+ E
Sbjct: 1275 RIASWNAMIVGLAQHGNAEEALQFFEEMKSRGVTPDRVTFIGVLSACSHSGLVSEAYENF 1334
Query: 355 EEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVP 394
+ G+E + + L+ S+ GRI +A++V +P
Sbjct: 1335 YSMQKIYGIEPEIEHYSCLVDALSRAGRIREAEKVISSMP 1374
Score = 139 bits (350), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 124/498 (24%), Positives = 222/498 (44%), Gaps = 32/498 (6%)
Query: 26 VHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSR 85
V T V K C S + +H + +K+G Q D FV L+++Y+K +R
Sbjct: 723 VSATRHTLAPVFKMCLLSASPSAAESLHGYAVKIGLQWDVFVAGALVNIYAKFGRIREAR 782
Query: 86 KVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCSF 145
+ D M LR VV WN ++ A+ L EA+L+ E GL T ++
Sbjct: 783 VLFDGMG--LRDVVLWNVMMKAYVDTGLEYEALLLFSEFNRTGLRPDDVTLCTLARVVKS 840
Query: 146 RQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGG 205
+Q + L ++ + + MY ++ +++W +
Sbjct: 841 KQNV--------LEWQLKQLKAYGTKLFMYDDDDDGSD------------VIAWNKTLSW 880
Query: 206 YVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNE 265
++ G EA M V D + F+ ++ A + L L +H ++++SG +
Sbjct: 881 FLQRGETWEAVDCFVDMINSRVACDGLTFVVMLSVVAGLNCLELGKQIHGIVVRSGLDQV 940
Query: 266 DPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLK 325
+ N L++MY K G + AR VF + E + W +MI G A G +V +F LL+
Sbjct: 941 VSVGNCLINMYVKTGSVSRARTVFWQMNEVDLVSWNTMISGCALSGLEECSVGMFVDLLR 1000
Query: 326 TSVRPNEATLATTLSACAEL-GSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRIN 384
+ P++ T+A+ L AC+ L G +I + G+ + V T+LI ++SK G++
Sbjct: 1001 GGLLPDQFTVASVLRACSSLGGGCHLATQIHACAMKAGVVLDSFVSTTLIDVYSKSGKME 1060
Query: 385 KAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSAC 444
+A+ +F DLA W+AM++GY + G +AL L+ MQ G + + + + A
Sbjct: 1061 EAEFLFVNQDGFDLASWNAMMHGYIVSGDFPKALRLYILMQE-SGERANQITLANAAKAA 1119
Query: 445 SHSGMVDDGLSFFKSMQS---NFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQ 501
G+V GL K +Q+ G + ++D+ + G + A + +E+P
Sbjct: 1120 --GGLV--GLKQGKQIQAVVVKRGFNLDLFVISGVLDMYLKCGEMESARRIFNEIPSPDD 1175
Query: 502 AQVWAPLLSACMKHHNVE 519
W ++S C+++ E
Sbjct: 1176 V-AWTTMISGCVENGQEE 1192
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 83/303 (27%), Positives = 144/303 (47%), Gaps = 9/303 (2%)
Query: 8 NGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFV 67
+G F + L Y M ++G N T KA + + GK++ + V+K GF D FV
Sbjct: 1087 SGDFPKALRLYILMQESGERANQITLANAAKAAGGLVGLKQGKQIQAVVVKRGFNLDLFV 1146
Query: 68 QTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVL 127
+G++DMY KC + S+R++ +E+P V+W ++IS + A+ M +
Sbjct: 1147 ISGVLDMYLKCGEMESARRIFNEIPS--PDDVAWTTMISGCVENGQEEHALFTYHHMRLS 1204
Query: 128 GLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNE 183
++ TF ++V CS QG +H KL + + S++ MYAK G + +
Sbjct: 1205 KVQPDEYTFATLVKACSLLTALEQGRQIHANTVKLNCAFDPFVM-TSLVDMYAKCGNIED 1263
Query: 184 ARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQ 243
AR +F + I SW +I G GN EA +M+ VTPD V F+ ++ C+
Sbjct: 1264 ARGLFKRTNTSRIASWNAMIVGLAQHGNAEEALQFFEEMKSRGVTPDRVTFIGVLSACSH 1323
Query: 244 VGNLFLAL-SMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAV-LEKSVFLWT 301
G + A + +S+ G E + LV ++ G + A +V ++ E S ++
Sbjct: 1324 SGLVSEAYENFYSMQKIYGIEPEIEHYSCLVDALSRAGRIREAEKVISSMPFEASASMYR 1383
Query: 302 SMI 304
+++
Sbjct: 1384 TLL 1386
Score = 95.5 bits (236), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 106/197 (53%), Gaps = 5/197 (2%)
Query: 246 NLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS--VFLWTSM 303
+L L H+ +L SG++ + L N L++MY+KCG L AR++FD + S + W ++
Sbjct: 641 DLPLGKRAHARILTSGHHPDRFLTNNLITMYSKCGSLSSARKLFDTTPDTSRDLVTWNAI 700
Query: 304 IGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGL 363
+ +A + +LF+ L ++ V TLA C S S + + Y V GL
Sbjct: 701 LSAHADKA--RDGFHLFRLLRRSFVSATRHTLAPVFKMCLLSASPSAAESLHGYAVKIGL 758
Query: 364 ESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYK 423
+ + V +L+++++K GRI +A+ +F+ + +D+ +W+ M+ Y G+ +AL LF +
Sbjct: 759 QWDVFVAGALVNIYAKFGRIREARVLFDGMGLRDVVLWNVMMKAYVDTGLEYEALLLFSE 818
Query: 424 MQHVEGLKPDAVVYTSI 440
GL+PD V ++
Sbjct: 819 FNRT-GLRPDDVTLCTL 834
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 101/208 (48%), Gaps = 7/208 (3%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI NG E L TY M + V + +TF ++KAC+ + ++ G+++H++ +K+
Sbjct: 1181 MISGCVENGQEEHALFTYHHMRLSKVQPDEYTFATLVKACSLLTALEQGRQIHANTVKLN 1240
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
D FV T L+DMY+KC + +R + + SWN++I ++ +EA+
Sbjct: 1241 CAFDPFVMTSLVDMYAKCGNIEDARGLFKR--TNTSRIASWNAMIVGLAQHGNAEEALQF 1298
Query: 121 LKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
+EM G+ TF+ V+S CS + + K+ + EI + ++ +
Sbjct: 1299 FEEMKSRGVTPDRVTFIGVLSACSHSGLVSEAYENFYSMQKIYGIEPEIEHYSCLVDALS 1358
Query: 177 KFGKVNEARSIFDEIG-ETSIVSWTTII 203
+ G++ EA + + E S + T++
Sbjct: 1359 RAGRIREAEKVISSMPFEASASMYRTLL 1386
>gi|15230248|ref|NP_189142.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75273633|sp|Q9LJR6.1|PP253_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g25060, mitochondrial; Flags: Precursor
gi|9293988|dbj|BAB01891.1| unnamed protein product [Arabidopsis thaliana]
gi|332643452|gb|AEE76973.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 601
Score = 339 bits (870), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 186/564 (32%), Positives = 312/564 (55%), Gaps = 10/564 (1%)
Query: 51 RVHSHVLKVG-FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHS 109
++H+ V+ G + + LI + + +RKV DE+P R SV +NS+I +S
Sbjct: 35 QIHAFVISTGNLLNGSSISRDLIASCGRIGEISYARKVFDELPQRGVSV--YNSMIVVYS 92
Query: 110 RACLNDEAILVLKEMWVLGLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEI 165
R DE + + +M ++ +STF + C +G ++ C G N++
Sbjct: 93 RGKNPDEVLRLYDQMIAEKIQPDSSTFTMTIKACLSGLVLEKGEAVWCKAVDFGY-KNDV 151
Query: 166 PLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRM 225
+ +SV+++Y K GK++EA +F ++ + ++ WTT++ G+ G +A +M+
Sbjct: 152 FVCSSVLNLYMKCGKMDEAEVLFGKMAKRDVICWTTMVTGFAQAGKSLKAVEFYREMQNE 211
Query: 226 SVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELA 285
D VV L L+ +G+ + S+H L ++G ++ LV MY K G +E+A
Sbjct: 212 GFGRDRVVMLGLLQASGDLGDTKMGRSVHGYLYRTGLPMNVVVETSLVDMYAKVGFIEVA 271
Query: 286 RRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAEL 345
RVF ++ K+ W S+I G+AQ G ++A + +P+ TL L AC+++
Sbjct: 272 SRVFSRMMFKTAVSWGSLISGFAQNGLANKAFEAVVEMQSLGFQPDLVTLVGVLVACSQV 331
Query: 346 GSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMI 405
GSL G+ + YI+ + +R T+L+ M+SKCG ++ ++E+FE V KDL W+ MI
Sbjct: 332 GSLKTGRLVHCYILKRHV-LDRVTATALMDMYSKCGALSSSREIFEHVGRKDLVCWNTMI 390
Query: 406 NGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFG 465
+ Y IHG G + ++LF KM ++PD + S+LSA SHSG+V+ G +F M + +
Sbjct: 391 SCYGIHGNGQEVVSLFLKMTE-SNIEPDHATFASLLSALSHSGLVEQGQHWFSVMINKYK 449
Query: 466 IEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAA 525
I+PS +HY+CL+DLL RAGR + AL I+ ++ +W LLS C+ H N+ +G+ AA
Sbjct: 450 IQPSEKHYVCLIDLLARAGRVEEALDMINSEKLDNALPIWVALLSGCINHRNLSVGDIAA 509
Query: 526 KNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVF 585
+L LNP S G L++N F +A WKE A R LM + + K PG+S +E++G ++ F
Sbjct: 510 NKILQLNPDSIGIQTLVSNFFATANKWKEVAKVRKLMRNGAMEKVPGYSAIEVNGELRTF 569
Query: 586 VAGDRSHHLSVDIRKTLKELHIKL 609
+ D SHH + + L+ L ++
Sbjct: 570 LMEDLSHHEHYHMLQVLRNLKTEI 593
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 117/448 (26%), Positives = 222/448 (49%), Gaps = 35/448 (7%)
Query: 12 EETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGL 71
+E L Y M+ + +S TF + +KAC + + G+ V + G++ D FV + +
Sbjct: 98 DEVLRLYDQMIAEKIQPDSSTFTMTIKACLSGLVLEKGEAVWCKAVDFGYKNDVFVCSSV 157
Query: 72 IDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLEL 131
+++Y KC + + +M R V+ W ++++ ++A + +A+ +EM G
Sbjct: 158 LNLYMKCGKMDEAEVLFGKMAK--RDVICWTTMVTGFAQAGKSLKAVEFYREMQNEGFGR 215
Query: 132 SASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSI 187
+ ++ + G S+H +Y+ GL N + + S++ MYAK G + A +
Sbjct: 216 DRVVMLGLLQASGDLGDTKMGRSVHGYLYRTGLPMN-VVVETSLVDMYAKVGFIEVASRV 274
Query: 188 FDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNL 247
F + + VSW ++I G+ G N+AF +M+ + PDLV + +++ C+QVG+L
Sbjct: 275 FSRMMFKTAVSWGSLISGFAQNGLANKAFEAVVEMQSLGFQPDLVTLVGVLVACSQVGSL 334
Query: 248 FLALSMHSLLLKSGYNNEDPLDNL----LVSMYTKCGDLELARRVFDAVLEKSVFLWTSM 303
+H +LK LD + L+ MY+KCG L +R +F+ V K + W +M
Sbjct: 335 KTGRLVHCYILK-----RHVLDRVTATALMDMYSKCGALSSSREIFEHVGRKDLVCWNTM 389
Query: 304 IGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKE-----IEEYI 358
I Y G E V+LF ++ ++++ P+ AT A+ LSA + G + +G+ I +Y
Sbjct: 390 ISCYGIHGNGQEVVSLFLKMTESNIEPDHATFASLLSALSHSGLVEQGQHWFSVMINKY- 448
Query: 359 VLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVP-DKDLAVWSAMINGYAIH---GMG 414
++ + + LI + ++ GR+ +A ++ D L +W A+++G H +G
Sbjct: 449 ---KIQPSEKHYVCLIDLLARAGRVEEALDMINSEKLDNALPIWVALLSGCINHRNLSVG 505
Query: 415 DQALNLFYKMQHVEGLKPDAVVYTSILS 442
D A N + L PD++ +++S
Sbjct: 506 DIAANKILQ------LNPDSIGIQTLVS 527
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 76/312 (24%), Positives = 144/312 (46%), Gaps = 10/312 (3%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
M+ G + + Y M G + +L+A ++ G+ VH ++ + G
Sbjct: 188 MVTGFAQAGKSLKAVEFYREMQNEGFGRDRVVMLGLLQASGDLGDTKMGRSVHGYLYRTG 247
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+ V+T L+DMY+K + +V M ++ VSW S+IS ++ L ++A
Sbjct: 248 LPMNVVVETSLVDMYAKVGFIEVASRVFSRM--MFKTAVSWGSLISGFAQNGLANKAFEA 305
Query: 121 LKEMWVLGLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
+ EM LG + T V V+ C S + G +HC + K +L+ A ++M MY+
Sbjct: 306 VVEMQSLGFQPDLVTLVGVLVACSQVGSLKTGRLVHCYILKRHVLDR--VTATALMDMYS 363
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K G ++ +R IF+ +G +V W T+I Y GN E L +M ++ PD F +
Sbjct: 364 KCGALSSSREIFEHVGRKDLVCWNTMISCYGIHGNGQEVVSLFLKMTESNIEPDHATFAS 423
Query: 237 LILGCAQVGNLFLALSMHSLLL-KSGYNNEDPLDNLLVSMYTKCGDLELARRVFDA-VLE 294
L+ + G + S+++ K + L+ + + G +E A + ++ L+
Sbjct: 424 LLSALSHSGLVEQGQHWFSVMINKYKIQPSEKHYVCLIDLLARAGRVEEALDMINSEKLD 483
Query: 295 KSVFLWTSMIGG 306
++ +W +++ G
Sbjct: 484 NALPIWVALLSG 495
>gi|359495784|ref|XP_003635090.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 616
Score = 339 bits (870), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 207/603 (34%), Positives = 326/603 (54%), Gaps = 41/603 (6%)
Query: 50 KRVHSHVLKVGFQQDAFVQTGLIDMYS--KCSDFVSSRKVLDEMPVRLRSVVSWNSIISA 107
K +H+ ++ G + LI + D ++++ D++P + + +NS+I
Sbjct: 5 KLLHAQIILHGLTNETLTLGKLISFCAVDDAGDLQYAQRMFDQIPQPNKFM--YNSLIRG 62
Query: 108 HSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNN 163
+S + +A+L+ + M GL + T V+ C ++ + + +H KLG+ +
Sbjct: 63 YSNSDDPIDAVLLFRRMICSGLSPNEFTLPFVLKACGCKSAYWEAVLVHGLAIKLGI-GS 121
Query: 164 EIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMR 223
+ + N+++++Y G ++ AR +FD+I + ++VSW ++IGGY ++GN EAF L +MR
Sbjct: 122 LVFVQNALIAVYVVCGLIHCARKLFDDITDKTLVSWNSMIGGYAHMGNWKEAFLLFRKMR 181
Query: 224 RMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLE 283
+ PD F+NL+ C+Q +L L +H + +G + + N LV MY KCG+L
Sbjct: 182 EWGMEPDGFTFVNLLSVCSQSRDLDLGRYVHFCIEITGVKIDIIVRNALVDMYAKCGNLH 241
Query: 284 LARRVFDAVLEKSVFLWTSMIGGYAQLG-----------YPS------------------ 314
A+ +FD EK+V WTSMI YAQ G P
Sbjct: 242 SAQAIFDRTQEKNVVSWTSMISAYAQHGSIEVARQIFDQMPGKNVVSWNSMISCYLREGQ 301
Query: 315 --EAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTS 372
EA++LF ++ + V P+EATL + L+AC++LG L GK+I YI+ N + S
Sbjct: 302 YREALDLFNKMRNSRVVPDEATLVSILAACSQLGDLVMGKKIHNYILSNKGAYGVTLYNS 361
Query: 373 LIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKP 432
LI M++KCG + A ++F +P K+L W+ +I A+HG G +A+ LF +MQ +G P
Sbjct: 362 LIDMYAKCGPVVTALDIFLEMPGKNLVSWNVIIGALALHGCGLEAIKLFEEMQ-ADGTLP 420
Query: 433 DAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKT 492
D + T +LSACSHSG+VD GL +F M + + IEHY C+VDLLGR G A++
Sbjct: 421 DEITLTGLLSACSHSGLVDMGLYYFDRMGVIYRVPREIEHYACMVDLLGRGGLLGEAIEL 480
Query: 493 IHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMW 552
I MP++ VW LL AC H NVE+G+ K LL L P S G Y+L++N++ A W
Sbjct: 481 IGRMPMKPDVVVWGALLGACRIHGNVEIGKQILKQLLELEPHSGGLYVLISNIYWEAQRW 540
Query: 553 KEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKELHIKLLEA 612
++ R LM DR + K S +EIDG + F+ D+ H +S I L +L L A
Sbjct: 541 EDVKKIRKLMIDRGIKKGRAISSIEIDGCIYEFMVDDKRHKISSSIYAMLDQLTDHLRSA 600
Query: 613 GYI 615
GY+
Sbjct: 601 GYL 603
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 137/495 (27%), Positives = 235/495 (47%), Gaps = 72/495 (14%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+IR +N+ + + + M+ +G+ N FT P VLKAC ++ W+ VH +K+G
Sbjct: 59 LIRGYSNSDDPIDAVLLFRRMICSGLSPNEFTLPFVLKACGCKSAYWEAVLVHGLAIKLG 118
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
FVQ LI +Y C +RK+ D+ + +++VSWNS+I ++ EA L+
Sbjct: 119 IGSLVFVQNALIAVYVVCGLIHCARKLFDD--ITDKTLVSWNSMIGGYAHMGNWKEAFLL 176
Query: 121 LKEMWVLGLELSASTFVSVVSGCSFRQGISM----HCCVYKLGLLNNEIPLANSVMSMYA 176
++M G+E TFV+++S CS + + + H C+ G + +I + N+++ MYA
Sbjct: 177 FRKMREWGMEPDGFTFVNLLSVCSQSRDLDLGRYVHFCIEITG-VKIDIIVRNALVDMYA 235
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNV------------------------ 212
K G ++ A++IFD E ++VSWT++I Y G++
Sbjct: 236 KCGNLHSAQAIFDRTQEKNVVSWTSMISAYAQHGSIEVARQIFDQMPGKNVVSWNSMISC 295
Query: 213 -------NEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNE 265
EA L N+MR V PD ++++ C+Q+G+L + +H+ +L +
Sbjct: 296 YLREGQYREALDLFNKMRNSRVVPDEATLVSILAACSQLGDLVMGKKIHNYILSNKGAYG 355
Query: 266 DPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLK 325
L N L+ MY KCG + A +F + K++ W +IG A G EA+ LF+ +
Sbjct: 356 VTLYNSLIDMYAKCGPVVTALDIFLEMPGKNLVSWNVIIGALALHGCGLEAIKLFEEMQA 415
Query: 326 TSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINK 385
P+E TL LSAC+ G + G ++ F + G
Sbjct: 416 DGTLPDEITLTGLLSACSHSGLVDMG----------------------LYYFDRMG---- 449
Query: 386 AKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACS 445
V RVP +++ ++ M++ G+ +A+ L +M +KPD VV+ ++L AC
Sbjct: 450 ---VIYRVP-REIEHYACMVDLLGRGGLLGEAIELIGRMP----MKPDVVVWGALLGACR 501
Query: 446 HSGMVDDGLSFFKSM 460
G V+ G K +
Sbjct: 502 IHGNVEIGKQILKQL 516
>gi|4544411|gb|AAD22320.1| hypothetical protein [Arabidopsis thaliana]
gi|91806147|gb|ABE65802.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 582
Score = 339 bits (870), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 188/577 (32%), Positives = 327/577 (56%), Gaps = 7/577 (1%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+I + NG + + MLQ G ++ T +L C + G+ VH K G
Sbjct: 12 LICGYSRNGYECDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSG 71
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+ D+ V+ LI YSKC++ S+ + EM + +S VSWN++I A+S++ L +EAI V
Sbjct: 72 LELDSQVKNALISFYSKCAELGSAEVLFREM--KDKSTVSWNTMIGAYSQSGLQEEAITV 129
Query: 121 LKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGK 180
K M+ +E+S T ++++S + +HC V K G++N +I + S++ Y++ G
Sbjct: 130 FKNMFEKNVEISPVTIINLLSAHVSHE--PLHCLVVKCGMVN-DISVVTSLVCAYSRCGC 186
Query: 181 VNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILG 240
+ A ++ + SIV T+I+ Y G+++ A ++ R++ + D V + ++ G
Sbjct: 187 LVSAERLYASAKQDSIVGLTSIVSCYAEKGDMDIAVVYFSKTRQLCMKIDAVALVGILHG 246
Query: 241 CAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLW 300
C + ++ + +S+H +KSG + + N L++MY+K D+E +F+ + E + W
Sbjct: 247 CKKSSHIDIGMSLHGYAIKSGLCTKTLVVNGLITMYSKFDDVETVLFLFEQLQETPLISW 306
Query: 301 TSMIGGYAQLGYPSEAVNLFKRLLKTS-VRPNEATLATTLSACAELGSLSKGKEIEEYIV 359
S+I G Q G S A +F +++ T + P+ T+A+ L+ C++L L+ GKE+ Y +
Sbjct: 307 NSVISGCVQSGRASTAFEVFHQMMLTGGLLPDAITIASLLAGCSQLCCLNLGKELHGYTL 366
Query: 360 LNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALN 419
N E+ V T+LI M++KCG +A+ VF+ + A W++MI+GY++ G+ +AL+
Sbjct: 367 RNNFENENFVCTALIDMYAKCGNEVQAESVFKSIKAPCTATWNSMISGYSLSGLQHRALS 426
Query: 420 LFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDL 479
+ +M+ +GLKPD + + +LSAC+H G VD+G F++M FGI P+++HY +V L
Sbjct: 427 CYLEMRE-KGLKPDEITFLGVLSACNHGGFVDEGKICFRAMIKEFGISPTLQHYALMVGL 485
Query: 480 LGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNY 539
LGRA F AL I +M ++ + VW LLSAC+ H +E+GEY A+ + L+ + G Y
Sbjct: 486 LGRACLFTEALYLIWKMDIKPDSAVWGALLSACIIHRELEVGEYVARKMFMLDYKNGGLY 545
Query: 540 ILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQV 576
+LM+NL+ + MW + R +M D G SQ+
Sbjct: 546 VLMSNLYATEAMWDDVVRVRNMMKDNGYDGYLGVSQI 582
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 119/442 (26%), Positives = 208/442 (47%), Gaps = 34/442 (7%)
Query: 96 RSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCS----FRQGISM 151
R V WN++I +SR +A + M G SA+T V+++ C QG S+
Sbjct: 4 RDTVVWNALICGYSRNGYECDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQGRSV 63
Query: 152 HCCVYKLGL-LNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVG 210
H K GL L++++ N+++S Y+K ++ A +F E+ + S VSW T+IG Y G
Sbjct: 64 HGVAAKSGLELDSQVK--NALISFYSKCAELGSAEVLFREMKDKSTVSWNTMIGAYSQSG 121
Query: 211 NVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDN 270
EA + M +V V +NL+ A V + +H L++K G N+ +
Sbjct: 122 LQEEAITVFKNMFEKNVEISPVTIINLL--SAHVSH----EPLHCLVVKCGMVNDISVVT 175
Query: 271 LLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRP 330
LV Y++CG L A R++ + + S+ TS++ YA+ G AV F + + ++
Sbjct: 176 SLVCAYSRCGCLVSAERLYASAKQDSIVGLTSIVSCYAEKGDMDIAVVYFSKTRQLCMKI 235
Query: 331 NEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVF 390
+ L L C + + G + Y + +GL + V LI M+SK + +F
Sbjct: 236 DAVALVGILHGCKKSSHIDIGMSLHGYAIKSGLCTKTLVVNGLITMYSKFDDVETVLFLF 295
Query: 391 ERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMV 450
E++ + L W+++I+G G A +F++M GL PDA+ S+L+ CS +
Sbjct: 296 EQLQETPLISWNSVISGCVQSGRASTAFEVFHQMMLTGGLLPDAITIASLLAGCSQLCCL 355
Query: 451 DDGLSFFK-SMQSNFGIEPSIEHYLC--LVDLLGRAGRFDLALKTIHEMPVEVQAQ-VWA 506
+ G ++++NF E+++C L+D+ + G EVQA+ V+
Sbjct: 356 NLGKELHGYTLRNNF----ENENFVCTALIDMYAKCGN-------------EVQAESVFK 398
Query: 507 PLLSACMKHHNVELGEYAAKNL 528
+ + C N + Y+ L
Sbjct: 399 SIKAPCTATWNSMISGYSLSGL 420
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 76/264 (28%), Positives = 128/264 (48%), Gaps = 7/264 (2%)
Query: 193 ETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALS 252
E V W +I GY G +A+ L M + +P +NL+ C Q G + S
Sbjct: 3 ERDTVVWNALICGYSRNGYECDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQGRS 62
Query: 253 MHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGY 312
+H + KSG + + N L+S Y+KC +L A +F + +KS W +MIG Y+Q G
Sbjct: 63 VHGVAAKSGLELDSQVKNALISFYSKCAELGSAEVLFREMKDKSTVSWNTMIGAYSQSGL 122
Query: 313 PSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTS 372
EA+ +FK + + +V + T+ LSA + + +V G+ ++ V TS
Sbjct: 123 QEEAITVFKNMFEKNVEISPVTIINLLSAHV------SHEPLHCLVVKCGMVNDISVVTS 176
Query: 373 LIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKP 432
L+ +S+CG + A+ ++ + +++++ YA G D A+ F K + + +K
Sbjct: 177 LVCAYSRCGCLVSAERLYASAKQDSIVGLTSIVSCYAEKGDMDIAVVYFSKTRQL-CMKI 235
Query: 433 DAVVYTSILSACSHSGMVDDGLSF 456
DAV IL C S +D G+S
Sbjct: 236 DAVALVGILHGCKKSSHIDIGMSL 259
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/325 (24%), Positives = 140/325 (43%), Gaps = 47/325 (14%)
Query: 294 EKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKE 353
E+ +W ++I GY++ GY +A LF +L+ P+ TL L C + G +S+G+
Sbjct: 3 ERDTVVWNALICGYSRNGYECDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQGRS 62
Query: 354 IEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGM 413
+ +GLE + QV+ +LI +SKC + A+ +F + DK W+ MI Y+ G+
Sbjct: 63 VHGVAAKSGLELDSQVKNALISFYSKCAELGSAEVLFREMKDKSTVSWNTMIGAYSQSGL 122
Query: 414 GDQALNLFYKM--QHVE--------------------------GLKPDAVVYTSILSACS 445
++A+ +F M ++VE G+ D V TS++ A S
Sbjct: 123 QEEAITVFKNMFEKNVEISPVTIINLLSAHVSHEPLHCLVVKCGMVNDISVVTSLVCAYS 182
Query: 446 HSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLAL---KTIHEMPVEVQA 502
G + + S + + SI +V G D+A+ ++ +++ A
Sbjct: 183 RCGCLVSAERLYASAKQD-----SIVGLTSIVSCYAEKGDMDIAVVYFSKTRQLCMKIDA 237
Query: 503 QVWAPLLSACMKHHNVELG----EYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATA 558
+L C K ++++G YA K+ G +++ L T + + T
Sbjct: 238 VALVGILHGCKKSSHIDIGMSLHGYAIKS------GLCTKTLVVNGLITMYSKFDDVETV 291
Query: 559 RGLMDDRRLTKEPGWSQVEIDGSVQ 583
L + + T W+ V I G VQ
Sbjct: 292 LFLFEQLQETPLISWNSV-ISGCVQ 315
Score = 43.9 bits (102), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Query: 393 VPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDD 452
+P++D VW+A+I GY+ +G A LF M +G P A ++L C G V
Sbjct: 1 MPERDTVVWNALICGYSRNGYECDAWKLFIVMLQ-QGFSPSATTLVNLLPFCGQCGFVSQ 59
Query: 453 GLS 455
G S
Sbjct: 60 GRS 62
>gi|449507426|ref|XP_004163029.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g34400-like [Cucumis sativus]
Length = 619
Score = 339 bits (870), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 196/599 (32%), Positives = 327/599 (54%), Gaps = 18/599 (3%)
Query: 30 SFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDM--YSKCSDFVSSRKV 87
S F +L+ C +I + K++H+ +L + + D+ ++ S F S+ +
Sbjct: 32 SDKFNSLLQQCLSIKQL---KQIHAQLLTNSIHKPNSFLYKIADLKDFAYASVFFSN--I 86
Query: 88 LDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCS--- 144
LD P V + +A +++ L A+ M LGL+ + T+ + CS
Sbjct: 87 LD--PTEYSFNVMIRGLSTAWNKSSL---ALEFYSRMKFLGLKPNNLTYPFLFIACSNLL 141
Query: 145 -FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTII 203
G HC V + GL + + +++S+++MYA+ GK+ +AR +FDEI + +VSW ++I
Sbjct: 142 AVENGRMGHCSVIRRGL-DEDGHVSHSLITMYARCGKMGDARKVFDEISQKDLVSWNSMI 200
Query: 204 GGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYN 263
GY + + EA GL +M P+ + ++++ C ++G+L L + ++++
Sbjct: 201 SGYSKMRHAGEAVGLFREMMEAGFQPNEMSLVSVLGACGELGDLKLGTWVEEFVVENKMT 260
Query: 264 NEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRL 323
+ + L+ MY KCGDL ARR+FD++ +K W +MI GYAQ G EA+ LF+ +
Sbjct: 261 LNYFMGSALIHMYGKCGDLVSARRIFDSMKKKDKVTWNAMITGYAQNGMSEEAIKLFQDM 320
Query: 324 LKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRI 383
+S P++ TL LSACA +G+L GK++E Y G + + V T+L+ M++KCG +
Sbjct: 321 RMSSTAPDQITLIGILSACASIGALDLGKQVEIYASERGFQDDVYVGTALVDMYAKCGSL 380
Query: 384 NKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEG-LKPDAVVYTSILS 442
+ A VF +P K+ W+AMI+ A HG +AL LF M + G + P+ + + +LS
Sbjct: 381 DNAFRVFYGMPKKNEVSWNAMISALAFHGQAQEALALFKSMMNEGGTVSPNDITFVGVLS 440
Query: 443 ACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQA 502
AC H+G+VD+G F M S+FG+ P IEHY C+VDL RAG + A + MP +
Sbjct: 441 ACVHAGLVDEGRRLFHMMSSSFGLVPKIEHYSCMVDLFSRAGHLEEAWDFVMTMPEKPDE 500
Query: 503 QVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLM 562
+ LL AC K N+++ E K LL L P ++GNY++ + L+ + W ++A R LM
Sbjct: 501 VILGALLGACQKRKNIDISERVMKLLLELEPSNSGNYVISSKLYANLRRWDDSARMRMLM 560
Query: 563 DDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKELHIKLLEAGYIAEADIV 621
+ ++K PG S ++I+ + F AGD H ++I + L L L GYI A+++
Sbjct: 561 KQKGVSKTPGCSWIDINSQLHEFHAGDVLHQEWIEIHQILDLLIDDLRREGYIPNANLL 619
Score = 194 bits (494), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 117/390 (30%), Positives = 200/390 (51%), Gaps = 10/390 (2%)
Query: 14 TLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLID 73
L YS M G+ N+ T+P + AC+N+ ++ +G+ H V++ G +D V LI
Sbjct: 111 ALEFYSRMKFLGLKPNNLTYPFLFIACSNLLAVENGRMGHCSVIRRGLDEDGHVSHSLIT 170
Query: 74 MYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSA 133
MY++C +RKV DE + + +VSWNS+IS +S+ EA+ + +EM G + +
Sbjct: 171 MYARCGKMGDARKVFDE--ISQKDLVSWNSMISGYSKMRHAGEAVGLFREMMEAGFQPNE 228
Query: 134 STFVSVVSGCSFRQGISMHCCVYKLGLLNNEIPL----ANSVMSMYAKFGKVNEARSIFD 189
+ VSV+ C + + V + ++ N++ L ++++ MY K G + AR IFD
Sbjct: 229 MSLVSVLGACGELGDLKLGTWVEEF-VVENKMTLNYFMGSALIHMYGKCGDLVSARRIFD 287
Query: 190 EIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFL 249
+ + V+W +I GY G EA L MR S PD + + ++ CA +G L L
Sbjct: 288 SMKKKDKVTWNAMITGYAQNGMSEEAIKLFQDMRMSSTAPDQITLIGILSACASIGALDL 347
Query: 250 ALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQ 309
+ + G+ ++ + LV MY KCG L+ A RVF + +K+ W +MI A
Sbjct: 348 GKQVEIYASERGFQDDVYVGTALVDMYAKCGSLDNAFRVFYGMPKKNEVSWNAMISALAF 407
Query: 310 LGYPSEAVNLFKRLLKT--SVRPNEATLATTLSACAELGSLSKGKEIEEYIVLN-GLESN 366
G EA+ LFK ++ +V PN+ T LSAC G + +G+ + + + GL
Sbjct: 408 HGQAQEALALFKSMMNEGGTVSPNDITFVGVLSACVHAGLVDEGRRLFHMMSSSFGLVPK 467
Query: 367 RQVQTSLIHMFSKCGRINKAKEVFERVPDK 396
+ + ++ +FS+ G + +A + +P+K
Sbjct: 468 IEHYSCMVDLFSRAGHLEEAWDFVMTMPEK 497
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 116/239 (48%), Gaps = 9/239 (3%)
Query: 13 ETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLI 72
E + + M++ G N + VL AC + + G V V++ + F+ + LI
Sbjct: 211 EAVGLFREMMEAGFQPNEMSLVSVLGACGELGDLKLGTWVEEFVVENKMTLNYFMGSALI 270
Query: 73 DMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELS 132
MY KC D VS+R++ D M + + V+WN++I+ +++ +++EAI + ++M +
Sbjct: 271 HMYGKCGDLVSARRIFDSM--KKKDKVTWNAMITGYAQNGMSEEAIKLFQDMRMSSTAPD 328
Query: 133 ASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIF 188
T + ++S C + G + + G +++ + +++ MYAK G ++ A +F
Sbjct: 329 QITLIGILSACASIGALDLGKQVEIYASERG-FQDDVYVGTALVDMYAKCGSLDNAFRVF 387
Query: 189 DEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRM--SVTPDLVVFLNLILGCAQVG 245
+ + + VSW +I G EA L M +V+P+ + F+ ++ C G
Sbjct: 388 YGMPKKNEVSWNAMISALAFHGQAQEALALFKSMMNEGGTVSPNDITFVGVLSACVHAG 446
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 119/266 (44%), Gaps = 44/266 (16%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI NG EE + + M + + T +L ACA+I ++ GK+V + + G
Sbjct: 300 MITGYAQNGMSEEAIKLFQDMRMSSTAPDQITLIGILSACASIGALDLGKQVEIYASERG 359
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
FQ D +V T L+DMY+KC ++ +V MP ++ VSWN++ISA + EA+ +
Sbjct: 360 FQDDVYVGTALVDMYAKCGSLDNAFRVFYGMPK--KNEVSWNAMISALAFHGQAQEALAL 417
Query: 121 LKEMWVLGLELSAS--TFVSVVSGCSFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKF 178
K M G +S + TFV V+S C +H
Sbjct: 418 FKSMMNEGGTVSPNDITFVGVLSAC-------VHA------------------------- 445
Query: 179 GKVNEARSIFDEIGET-----SIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVV 233
G V+E R +F + + I ++ ++ + G++ EA+ + M PD V+
Sbjct: 446 GLVDEGRRLFHMMSSSFGLVPKIEHYSCMVDLFSRAGHLEEAWDF---VMTMPEKPDEVI 502
Query: 234 FLNLILGCAQVGNLFLALSMHSLLLK 259
L+ C + N+ ++ + LLL+
Sbjct: 503 LGALLGACQKRKNIDISERVMKLLLE 528
>gi|116831059|gb|ABK28484.1| unknown [Arabidopsis thaliana]
Length = 583
Score = 339 bits (870), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 188/577 (32%), Positives = 327/577 (56%), Gaps = 7/577 (1%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+I + NG + + MLQ G ++ T +L C + G+ VH K G
Sbjct: 12 LICGYSRNGYECDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSG 71
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+ D+ V+ LI YSKC++ S+ + EM + +S VSWN++I A+S++ L +EAI V
Sbjct: 72 LELDSQVKNALISFYSKCAELGSAEVLFREM--KDKSTVSWNTMIGAYSQSGLQEEAITV 129
Query: 121 LKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGK 180
K M+ +E+S T ++++S + +HC V K G++N +I + S++ Y++ G
Sbjct: 130 FKNMFEKNVEISPVTIINLLSAHVSHE--PLHCLVVKCGMVN-DISVVTSLVCAYSRCGC 186
Query: 181 VNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILG 240
+ A ++ + SIV T+I+ Y G+++ A ++ R++ + D V + ++ G
Sbjct: 187 LVSAERLYASAKQDSIVGLTSIVSCYAEKGDMDIAVVYFSKTRQLCMKIDAVALVGILHG 246
Query: 241 CAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLW 300
C + ++ + +S+H +KSG + + N L++MY+K D+E +F+ + E + W
Sbjct: 247 CKKSSHIDIGMSLHGYAIKSGLCTKTLVVNGLITMYSKFDDVETVLFLFEQLQETPLISW 306
Query: 301 TSMIGGYAQLGYPSEAVNLFKRLLKTS-VRPNEATLATTLSACAELGSLSKGKEIEEYIV 359
S+I G Q G S A +F +++ T + P+ T+A+ L+ C++L L+ GKE+ Y +
Sbjct: 307 NSVISGCVQSGRASTAFEVFHQMMLTGGLLPDAITIASLLAGCSQLCCLNLGKELHGYTL 366
Query: 360 LNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALN 419
N E+ V T+LI M++KCG +A+ VF+ + A W++MI+GY++ G+ +AL+
Sbjct: 367 RNNFENENFVCTALIDMYAKCGNEVQAESVFKSIKAPCTATWNSMISGYSLSGLQHRALS 426
Query: 420 LFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDL 479
+ +M+ +GLKPD + + +LSAC+H G VD+G F++M FGI P+++HY +V L
Sbjct: 427 CYLEMRE-KGLKPDEITFLGVLSACNHGGFVDEGKICFRAMIKEFGISPTLQHYALMVGL 485
Query: 480 LGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNY 539
LGRA F AL I +M ++ + VW LLSAC+ H +E+GEY A+ + L+ + G Y
Sbjct: 486 LGRACLFTEALYLIWKMDIKPDSAVWGALLSACIIHRELEVGEYVARKMFMLDYKNGGLY 545
Query: 540 ILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQV 576
+LM+NL+ + MW + R +M D G SQ+
Sbjct: 546 VLMSNLYATEAMWDDVVRVRNMMKDNGYDGYLGVSQI 582
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 119/442 (26%), Positives = 208/442 (47%), Gaps = 34/442 (7%)
Query: 96 RSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCS----FRQGISM 151
R V WN++I +SR +A + M G SA+T V+++ C QG S+
Sbjct: 4 RDTVVWNALICGYSRNGYECDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQGRSV 63
Query: 152 HCCVYKLGL-LNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVG 210
H K GL L++++ N+++S Y+K ++ A +F E+ + S VSW T+IG Y G
Sbjct: 64 HGVAAKSGLELDSQVK--NALISFYSKCAELGSAEVLFREMKDKSTVSWNTMIGAYSQSG 121
Query: 211 NVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDN 270
EA + M +V V +NL+ A V + +H L++K G N+ +
Sbjct: 122 LQEEAITVFKNMFEKNVEISPVTIINLL--SAHVSH----EPLHCLVVKCGMVNDISVVT 175
Query: 271 LLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRP 330
LV Y++CG L A R++ + + S+ TS++ YA+ G AV F + + ++
Sbjct: 176 SLVCAYSRCGCLVSAERLYASAKQDSIVGLTSIVSCYAEKGDMDIAVVYFSKTRQLCMKI 235
Query: 331 NEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVF 390
+ L L C + + G + Y + +GL + V LI M+SK + +F
Sbjct: 236 DAVALVGILHGCKKSSHIDIGMSLHGYAIKSGLCTKTLVVNGLITMYSKFDDVETVLFLF 295
Query: 391 ERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMV 450
E++ + L W+++I+G G A +F++M GL PDA+ S+L+ CS +
Sbjct: 296 EQLQETPLISWNSVISGCVQSGRASTAFEVFHQMMLTGGLLPDAITIASLLAGCSQLCCL 355
Query: 451 DDGLSFFK-SMQSNFGIEPSIEHYLC--LVDLLGRAGRFDLALKTIHEMPVEVQAQ-VWA 506
+ G ++++NF E+++C L+D+ + G EVQA+ V+
Sbjct: 356 NLGKELHGYTLRNNF----ENENFVCTALIDMYAKCGN-------------EVQAESVFK 398
Query: 507 PLLSACMKHHNVELGEYAAKNL 528
+ + C N + Y+ L
Sbjct: 399 SIKAPCTATWNSMISGYSLSGL 420
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 76/264 (28%), Positives = 128/264 (48%), Gaps = 7/264 (2%)
Query: 193 ETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALS 252
E V W +I GY G +A+ L M + +P +NL+ C Q G + S
Sbjct: 3 ERDTVVWNALICGYSRNGYECDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQGRS 62
Query: 253 MHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGY 312
+H + KSG + + N L+S Y+KC +L A +F + +KS W +MIG Y+Q G
Sbjct: 63 VHGVAAKSGLELDSQVKNALISFYSKCAELGSAEVLFREMKDKSTVSWNTMIGAYSQSGL 122
Query: 313 PSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTS 372
EA+ +FK + + +V + T+ LSA + + +V G+ ++ V TS
Sbjct: 123 QEEAITVFKNMFEKNVEISPVTIINLLSAHV------SHEPLHCLVVKCGMVNDISVVTS 176
Query: 373 LIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKP 432
L+ +S+CG + A+ ++ + +++++ YA G D A+ F K + + +K
Sbjct: 177 LVCAYSRCGCLVSAERLYASAKQDSIVGLTSIVSCYAEKGDMDIAVVYFSKTRQL-CMKI 235
Query: 433 DAVVYTSILSACSHSGMVDDGLSF 456
DAV IL C S +D G+S
Sbjct: 236 DAVALVGILHGCKKSSHIDIGMSL 259
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/325 (24%), Positives = 140/325 (43%), Gaps = 47/325 (14%)
Query: 294 EKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKE 353
E+ +W ++I GY++ GY +A LF +L+ P+ TL L C + G +S+G+
Sbjct: 3 ERDTVVWNALICGYSRNGYECDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQGRS 62
Query: 354 IEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGM 413
+ +GLE + QV+ +LI +SKC + A+ +F + DK W+ MI Y+ G+
Sbjct: 63 VHGVAAKSGLELDSQVKNALISFYSKCAELGSAEVLFREMKDKSTVSWNTMIGAYSQSGL 122
Query: 414 GDQALNLFYKM--QHVE--------------------------GLKPDAVVYTSILSACS 445
++A+ +F M ++VE G+ D V TS++ A S
Sbjct: 123 QEEAITVFKNMFEKNVEISPVTIINLLSAHVSHEPLHCLVVKCGMVNDISVVTSLVCAYS 182
Query: 446 HSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLAL---KTIHEMPVEVQA 502
G + + S + + SI +V G D+A+ ++ +++ A
Sbjct: 183 RCGCLVSAERLYASAKQD-----SIVGLTSIVSCYAEKGDMDIAVVYFSKTRQLCMKIDA 237
Query: 503 QVWAPLLSACMKHHNVELG----EYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATA 558
+L C K ++++G YA K+ G +++ L T + + T
Sbjct: 238 VALVGILHGCKKSSHIDIGMSLHGYAIKS------GLCTKTLVVNGLITMYSKFDDVETV 291
Query: 559 RGLMDDRRLTKEPGWSQVEIDGSVQ 583
L + + T W+ V I G VQ
Sbjct: 292 LFLFEQLQETPLISWNSV-ISGCVQ 315
Score = 43.9 bits (102), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Query: 393 VPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDD 452
+P++D VW+A+I GY+ +G A LF M +G P A ++L C G V
Sbjct: 1 MPERDTVVWNALICGYSRNGYECDAWKLFIVMLQ-QGFSPSATTLVNLLPFCGQCGFVSQ 59
Query: 453 GLS 455
G S
Sbjct: 60 GRS 62
>gi|359485832|ref|XP_002268817.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950 [Vitis vinifera]
Length = 1736
Score = 339 bits (870), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 203/602 (33%), Positives = 336/602 (55%), Gaps = 17/602 (2%)
Query: 29 NSFTFPLVLKACANINSIWDGKR----VHSHVLKVGFQQDAF-VQTGLIDMYSKCSDFVS 83
NS ++ ++L A + + + +G+R VH+HV++ G + + GL++MY+K
Sbjct: 381 NSDSYVVLLSAFSEFSVLEEGRRKGREVHAHVIRTGLNDNKVAIGNGLVNMYAKSGAIAD 440
Query: 84 SRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGC 143
+ V + M + VSWNS+IS + +++A M G S T +S +S C
Sbjct: 441 ACSVFELMVEK--DSVSWNSLISGLDQNECSEDAAESFHRMRRTGSMPSNFTLISTLSSC 498
Query: 144 S----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSW 199
+ G +HC KLGL + ++ ++N+++++YA+ G E +F + E VSW
Sbjct: 499 ASLGWIMLGEQIHCDGLKLGL-DTDVSVSNALLALYAETGCFTECLKVFSLMPEYDQVSW 557
Query: 200 TTIIGGYVNV-GNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLL 258
++IG + +V++A QM R V F+N++ + + ++ +H+L+L
Sbjct: 558 NSVIGALSDSEASVSQAVKYFLQMMRGGWGLSRVTFINILSAVSSLSLHEVSHQIHALVL 617
Query: 259 KSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLE-KSVFLWTSMIGGYAQLGYPSEAV 317
K +++ + N L+S Y KCG++ ++F + E + W SMI GY +A+
Sbjct: 618 KYCLSDDTAIGNALLSCYGKCGEMNECEKIFARMSETRDEVSWNSMISGYIHNELLHKAM 677
Query: 318 NLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMF 377
+L +++ R + T AT LSACA + +L +G E+ + LES+ V ++L+ M+
Sbjct: 678 DLVWFMMQKGQRLDSFTFATILSACASVATLERGMEVHACGIRACLESDVVVGSALVDMY 737
Query: 378 SKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVY 437
SKCGRI+ A FE +P +++ W++MI+GYA HG G++AL LF +M ++G PD V +
Sbjct: 738 SKCGRIDYASRFFELMPLRNVYSWNSMISGYARHGHGEKALKLFTRMM-LDGQPPDHVTF 796
Query: 438 TSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMP 497
+LSACSH G V++G FKSM + + P +EH+ C+VDLLGRAG+ D I+ MP
Sbjct: 797 VGVLSACSHVGFVEEGFEHFKSMSEVYRLSPRVEHFSCMVDLLGRAGKLDEVGDFINSMP 856
Query: 498 VEVQAQVWAPLLSACMKHH--NVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEA 555
++ +W +L AC + + N ELG AA+ LL L P + NY+L+AN++ S W++
Sbjct: 857 MKPNVLIWRTVLGACCRANGRNTELGRRAAEMLLELEPQNAVNYVLLANMYASGEKWEDV 916
Query: 556 ATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKELHIKLLEAGYI 615
A AR M + + KE G S V + V VFVAGD+ H I L+EL+ K+ +AGYI
Sbjct: 917 AKARTAMKEAAVKKEAGCSWVTMKDGVHVFVAGDKLHPEKDLIYDKLRELNRKMRDAGYI 976
Query: 616 AE 617
+
Sbjct: 977 PQ 978
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 110/415 (26%), Positives = 211/415 (50%), Gaps = 15/415 (3%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+I N E+ ++ M +TG ++FT L +CA++ I G+++H LK+G
Sbjct: 459 LISGLDQNECSEDAAESFHRMRRTGSMPSNFTLISTLSSCASLGWIMLGEQIHCDGLKLG 518
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLN-DEAIL 119
D V L+ +Y++ F KV MP VSWNS+I A S + + +A+
Sbjct: 519 LDTDVSVSNALLALYAETGCFTECLKVFSLMPE--YDQVSWNSVIGALSDSEASVSQAVK 576
Query: 120 VLKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLG------LLNNEIPLANSVMS 173
+M G LS TF++++S S +S+H +++ L+++ + N+++S
Sbjct: 577 YFLQMMRGGWGLSRVTFINILSAVS---SLSLHEVSHQIHALVLKYCLSDDTAIGNALLS 633
Query: 174 MYAKFGKVNEARSIFDEIGET-SIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLV 232
Y K G++NE IF + ET VSW ++I GY++ +++A L M + D
Sbjct: 634 CYGKCGEMNECEKIFARMSETRDEVSWNSMISGYIHNELLHKAMDLVWFMMQKGQRLDSF 693
Query: 233 VFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAV 292
F ++ CA V L + +H+ +++ ++ + + LV MY+KCG ++ A R F+ +
Sbjct: 694 TFATILSACASVATLERGMEVHACGIRACLESDVVVGSALVDMYSKCGRIDYASRFFELM 753
Query: 293 LEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGK 352
++V+ W SMI GYA+ G+ +A+ LF R++ P+ T LSAC+ +G + +G
Sbjct: 754 PLRNVYSWNSMISGYARHGHGEKALKLFTRMMLDGQPPDHVTFVGVLSACSHVGFVEEGF 813
Query: 353 E-IEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDK-DLAVWSAMI 405
E + + L + + ++ + + G++++ + +P K ++ +W ++
Sbjct: 814 EHFKSMSEVYRLSPRVEHFSCMVDLLGRAGKLDEVGDFINSMPMKPNVLIWRTVL 868
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 129/467 (27%), Positives = 229/467 (49%), Gaps = 30/467 (6%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKAC--ANINSIWDGKRVHSHVLK 58
+I T NG +E + + M++ G N + F L+AC + + G ++H + K
Sbjct: 143 LISGYTQNGKPDEACARFRDMVRAGFIPNHYAFGSALRACQESGPSGCKLGVQIHGLISK 202
Query: 59 VGFQQDAFVQTGLIDMYSKCSDFVS-SRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEA 117
+ D V LI MY C D + +R V D + +R+ +SWNSIIS +SR A
Sbjct: 203 TRYGSDVVVCNVLISMYGSCLDSANDARSVFD--GIGIRNSISWNSIISVYSRRGDAVSA 260
Query: 118 ILVLKEMWVLGLELSAS----TFVSVV-SGCSFRQGISMHCCVY--------KLGLLNNE 164
+ M GL S TF S++ + CS + CV K G L +
Sbjct: 261 YDLFSSMQKEGLGFSFKPNEYTFGSLITTACS---SVDFGLCVLEQMLARVEKSGFL-QD 316
Query: 165 IPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRR 224
+ ++++++S +A+FG ++A++IF+++G ++VS ++ G V A + ++M+
Sbjct: 317 LYVSSALVSGFARFGLTDDAKNIFEQMGVRNVVSMNGLMVGLVKQKQGEAAAKVFHEMKD 376
Query: 225 M-SVTPD-LVVFLNLI--LGCAQVGNLFLALSMHSLLLKSGYN-NEDPLDNLLVSMYTKC 279
+ + D VV L+ + G +H+ ++++G N N+ + N LV+MY K
Sbjct: 377 LVGINSDSYVVLLSAFSEFSVLEEGRR-KGREVHAHVIRTGLNDNKVAIGNGLVNMYAKS 435
Query: 280 GDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTL 339
G + A VF+ ++EK W S+I G Q +A F R+ +T P+ TL +TL
Sbjct: 436 GAIADACSVFELMVEKDSVSWNSLISGLDQNECSEDAAESFHRMRRTGSMPSNFTLISTL 495
Query: 340 SACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLA 399
S+CA LG + G++I + GL+++ V +L+ ++++ G + +VF +P+ D
Sbjct: 496 SSCASLGWIMLGEQIHCDGLKLGLDTDVSVSNALLALYAETGCFTECLKVFSLMPEYDQV 555
Query: 400 VWSAMINGYAIHGMG-DQALNLFYKMQHVEGLKPDAVVYTSILSACS 445
W+++I + QA+ F +M G V + +ILSA S
Sbjct: 556 SWNSVIGALSDSEASVSQAVKYFLQMMR-GGWGLSRVTFINILSAVS 601
Score = 142 bits (357), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 132/520 (25%), Positives = 237/520 (45%), Gaps = 39/520 (7%)
Query: 17 TYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYS 76
T +S T + +S TF ++ + + +H +K GF + F+ LI++Y
Sbjct: 58 TSTSHCNTTLFSSSETFESLINRYQGSCCSEEARELHLQSIKYGFVGNLFLSNTLINIYV 117
Query: 77 KCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTF 136
+ D S++K+ DEM R++V+W +IS +++ DEA ++M G + F
Sbjct: 118 RIGDLGSAQKLFDEMSN--RNLVTWACLISGYTQNGKPDEACARFRDMVRAGFIPNHYAF 175
Query: 137 VSVVSGCS------FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAK-FGKVNEARSIFD 189
S + C + G+ +H + K +++ + N ++SMY N+ARS+FD
Sbjct: 176 GSALRACQESGPSGCKLGVQIHGLISKT-RYGSDVVVCNVLISMYGSCLDSANDARSVFD 234
Query: 190 EIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRR----MSVTPDLVVFLNLI-LGCAQV 244
IG + +SW +II Y G+ A+ L + M++ S P+ F +LI C+ V
Sbjct: 235 GIGIRNSISWNSIISVYSRRGDAVSAYDLFSSMQKEGLGFSFKPNEYTFGSLITTACSSV 294
Query: 245 G-NLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSM 303
L + M + + KSG+ + + + LVS + + G + A+ +F+ + ++V +
Sbjct: 295 DFGLCVLEQMLARVEKSGFLQDLYVSSALVSGFARFGLTDDAKNIFEQMGVRNVVSMNGL 354
Query: 304 IGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLS----KGKEIEEYIV 359
+ G + A +F +K V N + LSA +E L KG+E+ +++
Sbjct: 355 MVGLVKQKQGEAAAKVFHE-MKDLVGINSDSYVVLLSAFSEFSVLEEGRRKGREVHAHVI 413
Query: 360 LNGLESNR-QVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQAL 418
GL N+ + L++M++K G I A VFE + +KD W+++I+G + + A
Sbjct: 414 RTGLNDNKVAIGNGLVNMYAKSGAIADACSVFELMVEKDSVSWNSLISGLDQNECSEDAA 473
Query: 419 NLFYKMQHVEGLKPDAVVYTSILSACSHSGMV-------DDGLSFFKSMQSNFGIEPSIE 471
F++M+ G P S LS+C+ G + DGL G++ +
Sbjct: 474 ESFHRMRRT-GSMPSNFTLISTLSSCASLGWIMLGEQIHCDGL--------KLGLDTDVS 524
Query: 472 HYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSA 511
L+ L G F LK MP E W ++ A
Sbjct: 525 VSNALLALYAETGCFTECLKVFSLMP-EYDQVSWNSVIGA 563
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 105/439 (23%), Positives = 217/439 (49%), Gaps = 26/439 (5%)
Query: 132 SASTFVSVVS----GCSFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSI 187
S+ TF S+++ C + +H K G + N + L+N+++++Y + G + A+ +
Sbjct: 70 SSETFESLINRYQGSCCSEEARELHLQSIKYGFVGN-LFLSNTLINIYVRIGDLGSAQKL 128
Query: 188 FDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVG-- 245
FDE+ ++V+W +I GY G +EA M R P+ F + + C + G
Sbjct: 129 FDEMSNRNLVTWACLISGYTQNGKPDEACARFRDMVRAGFIPNHYAFGSALRACQESGPS 188
Query: 246 NLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGD-LELARRVFDAVLEKSVFLWTSMI 304
L + +H L+ K+ Y ++ + N+L+SMY C D AR VFD + ++ W S+I
Sbjct: 189 GCKLGVQIHGLISKTRYGSDVVVCNVLISMYGSCLDSANDARSVFDGIGIRNSISWNSII 248
Query: 305 GGYAQLGYPSEAVNLFKRLLKT----SVRPNEATLATTL-SACAELG-SLSKGKEIEEYI 358
Y++ G A +LF + K S +PNE T + + +AC+ + L +++ +
Sbjct: 249 SVYSRRGDAVSAYDLFSSMQKEGLGFSFKPNEYTFGSLITTACSSVDFGLCVLEQMLARV 308
Query: 359 VLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQAL 418
+G + V ++L+ F++ G + AK +FE++ +++ + ++ G G+ A
Sbjct: 309 EKSGFLQDLYVSSALVSGFARFGLTDDAKNIFEQMGVRNVVSMNGLMVGLVKQKQGEAAA 368
Query: 419 NLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLC--- 475
+F++M+ + G+ D+ Y +LSA S ++++G + + ++ ++ +
Sbjct: 369 KVFHEMKDLVGINSDS--YVVLLSAFSEFSVLEEGRRKGREVHAHVIRTGLNDNKVAIGN 426
Query: 476 -LVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPG 534
LV++ ++G A ++ E+ VE + W L+S ++ E E AA++ +
Sbjct: 427 GLVNMYAKSGAIADAC-SVFELMVEKDSVSWNSLISGLDQN---ECSEDAAESFHRMRRT 482
Query: 535 ST--GNYILMANLFTSAGM 551
+ N+ L++ L + A +
Sbjct: 483 GSMPSNFTLISTLSSCASL 501
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 108/222 (48%), Gaps = 7/222 (3%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI +N + + M+Q G +SFTF +L ACA++ ++ G VH+ ++
Sbjct: 663 MISGYIHNELLHKAMDLVWFMMQKGQRLDSFTFATILSACASVATLERGMEVHACGIRAC 722
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+ D V + L+DMYSKC + + + MP LR+V SWNS+IS ++R ++A+ +
Sbjct: 723 LESDVVVGSALVDMYSKCGRIDYASRFFELMP--LRNVYSWNSMISGYARHGHGEKALKL 780
Query: 121 LKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
M + G TFV V+S CS +G + ++ L+ + + ++ +
Sbjct: 781 FTRMMLDGQPPDHVTFVGVLSACSHVGFVEEGFEHFKSMSEVYRLSPRVEHFSCMVDLLG 840
Query: 177 KFGKVNEARSIFDEIG-ETSIVSWTTIIGGYVNVGNVNEAFG 217
+ GK++E + + + +++ W T++G N G
Sbjct: 841 RAGKLDEVGDFINSMPMKPNVLIWRTVLGACCRANGRNTELG 882
>gi|225441187|ref|XP_002266244.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 722
Score = 339 bits (870), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 203/627 (32%), Positives = 332/627 (52%), Gaps = 56/627 (8%)
Query: 36 VLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRL 95
+L++C S G ++H+ + G F + LI +S + S+ LD +
Sbjct: 15 LLESC---KSFKQGLQIHAQTIVNGLHHQIFSISRLISFFS----LLGSKDGLDHSRLLF 67
Query: 96 RSV-----VSWNSIISAHSRACLNDEAILVLKEMWVLGLELSAS-TFVSVVSGC----SF 145
+ WN++I +SR+ EAI++ M G+ + TF +++ C S
Sbjct: 68 SQIDCPNLFMWNTMIRGYSRSDNPREAIVLYMSMIAKGIAPPNNFTFPFLLNSCARLSSL 127
Query: 146 RQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGG 205
G +H + K G +++ + N+++ +Y+ FG +N AR++FDE +VS+ T+I G
Sbjct: 128 EPGHEVHSHIIKHGF-ESDLFVRNALIHLYSVFGNLNLARTLFDESLVRDLVSYNTMIKG 186
Query: 206 YVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGC-------------AQV-------- 244
Y V A L +M+ + PD F+ L C AQV
Sbjct: 187 YAEVNQPESALCLFGEMQNSGILPDEFTFVALFSVCSVLNEPNVGKQIHAQVYKNLRSID 246
Query: 245 GNLFLALSMHSLLLKSGYNN--EDPLDNL-----------LVSMYTKCGDLELARRVFDA 291
N+ L ++ + K G N E + +V Y +CG++ +AR++F+
Sbjct: 247 SNILLKSAIVDMYAKCGLINIAERVFSTMGTSKSAAAWSSMVCGYARCGEINVARKLFNH 306
Query: 292 VLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKG 351
+ E+ V WT+MI GY+Q G SEA+ LFK + ++P+E TL LSACA LG+ G
Sbjct: 307 MHERDVISWTAMISGYSQAGQCSEALELFKEMEALGIKPDEVTLVAVLSACARLGAFDLG 366
Query: 352 KEIEEYIVLNGLESNRQVQTS-LIHMFSKCGRINKAKEVFERVPD--KDLAVWSAMINGY 408
K + + NG+ + + T+ ++ M++KCG I+ A E+F RV K V+++MI G
Sbjct: 367 KRLYHQYIENGVFNQNTILTAAVMDMYAKCGSIDSALEIFRRVGKNMKTGFVFNSMIAGL 426
Query: 409 AIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEP 468
A HG+G+ A+ +F ++ GLKPD V + +L AC HSG++++G F+SM + +GI+P
Sbjct: 427 AQHGLGETAITVFRELIST-GLKPDEVTFVGVLCACGHSGLIEEGKKLFESMFNAYGIKP 485
Query: 469 SIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNL 528
+EHY C+VDLLGR G + A + +MP E + +W LLSAC H NV++GE A + L
Sbjct: 486 QMEHYGCMVDLLGRYGCLEEAYDLVQKMPFEANSVIWRALLSACRTHGNVKIGEIAGQKL 545
Query: 529 LTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAG 588
L + Y+L++N+ A W+EA R +M+D + K PGWS +E+ G++ FVA
Sbjct: 546 LEMEAQHGARYVLLSNILADANQWEEARQVRKVMEDHGIRKPPGWSYIELGGAIHRFVAS 605
Query: 589 DRSHHLSVDIRKTLKELHIKLLEAGYI 615
D+SH +I LK++ ++L AGY+
Sbjct: 606 DKSHPQGKEIELMLKDMAMRLKSAGYV 632
Score = 206 bits (523), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 129/455 (28%), Positives = 232/455 (50%), Gaps = 45/455 (9%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHG-NSFTFPLVLKACANINSIWDGKRVHSHVLKV 59
MIR + + + E + Y SM+ G+ N+FTFP +L +CA ++S+ G VHSH++K
Sbjct: 81 MIRGYSRSDNPREAIVLYMSMIAKGIAPPNNFTFPFLLNSCARLSSLEPGHEVHSHIIKH 140
Query: 60 GFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAIL 119
GF+ D FV+ LI +YS + +R + DE V R +VS+N++I ++ + A+
Sbjct: 141 GFESDLFVRNALIHLYSVFGNLNLARTLFDESLV--RDLVSYNTMIKGYAEVNQPESALC 198
Query: 120 VLKEMWVLGLELSASTFVSVVSGCSFRQ----GISMHCCVYK-LGLLNNEIPLANSVMSM 174
+ EM G+ TFV++ S CS G +H VYK L +++ I L ++++ M
Sbjct: 199 LFGEMQNSGILPDEFTFVALFSVCSVLNEPNVGKQIHAQVYKNLRSIDSNILLKSAIVDM 258
Query: 175 YAK--------------------------------FGKVNEARSIFDEIGETSIVSWTTI 202
YAK G++N AR +F+ + E ++SWT +
Sbjct: 259 YAKCGLINIAERVFSTMGTSKSAAAWSSMVCGYARCGEINVARKLFNHMHERDVISWTAM 318
Query: 203 IGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSG- 261
I GY G +EA L +M + + PD V + ++ CA++G L ++ +++G
Sbjct: 319 ISGYSQAGQCSEALELFKEMEALGIKPDEVTLVAVLSACARLGAFDLGKRLYHQYIENGV 378
Query: 262 YNNEDPLDNLLVSMYTKCGDLELARRVFDAVLE--KSVFLWTSMIGGYAQLGYPSEAVNL 319
+N L ++ MY KCG ++ A +F V + K+ F++ SMI G AQ G A+ +
Sbjct: 379 FNQNTILTAAVMDMYAKCGSIDSALEIFRRVGKNMKTGFVFNSMIAGLAQHGLGETAITV 438
Query: 320 FKRLLKTSVRPNEATLATTLSACAELGSLSKGKEI-EEYIVLNGLESNRQVQTSLIHMFS 378
F+ L+ T ++P+E T L AC G + +GK++ E G++ + ++ +
Sbjct: 439 FRELISTGLKPDEVTFVGVLCACGHSGLIEEGKKLFESMFNAYGIKPQMEHYGCMVDLLG 498
Query: 379 KCGRINKAKEVFERVP-DKDLAVWSAMINGYAIHG 412
+ G + +A ++ +++P + + +W A+++ HG
Sbjct: 499 RYGCLEEAYDLVQKMPFEANSVIWRALLSACRTHG 533
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 111/379 (29%), Positives = 197/379 (51%), Gaps = 14/379 (3%)
Query: 124 MWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGK--- 180
MW L + S+ + S SF+QG+ +H GL +++I + ++S ++ G
Sbjct: 1 MWKRFLLENPSSLCLLESCKSFKQGLQIHAQTIVNGL-HHQIFSISRLISFFSLLGSKDG 59
Query: 181 VNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTP-DLVVFLNLIL 239
++ +R +F +I ++ W T+I GY N EA L M + P + F L+
Sbjct: 60 LDHSRLLFSQIDCPNLFMWNTMIRGYSRSDNPREAIVLYMSMIAKGIAPPNNFTFPFLLN 119
Query: 240 GCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFL 299
CA++ +L +HS ++K G+ ++ + N L+ +Y+ G+L LAR +FD L + +
Sbjct: 120 SCARLSSLEPGHEVHSHIIKHGFESDLFVRNALIHLYSVFGNLNLARTLFDESLVRDLVS 179
Query: 300 WTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEI--EEY 357
+ +MI GYA++ P A+ LF + + + P+E T S C+ L + GK+I + Y
Sbjct: 180 YNTMIKGYAEVNQPESALCLFGEMQNSGILPDEFTFVALFSVCSVLNEPNVGKQIHAQVY 239
Query: 358 IVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERV-PDKDLAVWSAMINGYAIHGMGDQ 416
L ++SN ++++++ M++KCG IN A+ VF + K A WS+M+ GYA G +
Sbjct: 240 KNLRSIDSNILLKSAIVDMYAKCGLINIAERVFSTMGTSKSAAAWSSMVCGYARCGEINV 299
Query: 417 ALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCL 476
A LF M + D + +T+++S S +G + L FK M++ GI+P + +
Sbjct: 300 ARKLFNHMH-----ERDVISWTAMISGYSQAGQCSEALELFKEMEA-LGIKPDEVTLVAV 353
Query: 477 VDLLGRAGRFDLALKTIHE 495
+ R G FDL + H+
Sbjct: 354 LSACARLGAFDLGKRLYHQ 372
>gi|413916018|gb|AFW55950.1| hypothetical protein ZEAMMB73_919937 [Zea mays]
Length = 864
Score = 339 bits (870), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 183/617 (29%), Positives = 321/617 (52%), Gaps = 8/617 (1%)
Query: 2 IRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGF 61
I N + + + M + G+ + + ++CA + + +++H+H +K F
Sbjct: 224 IAGCVQNEQYTRGMELFVQMQRLGLGVSQPAYASAFRSCAAMPCLSTARQLHAHAIKNVF 283
Query: 62 QQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVL 121
D V T ++D+Y+K + V +R+ +P +V + N+++ R L EA+ +
Sbjct: 284 SSDRVVGTAIVDVYAKAGNLVDARRAFIGLP--HHNVETCNAMMVGLVRTGLGAEAMQLF 341
Query: 122 KEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAK 177
+ M G+ + V S C+ + QG+ +HC K G + ++ + N+++ +Y K
Sbjct: 342 QFMTRSGVGFDVISLSGVFSACAEVKGYFQGLQVHCLAVKSGF-DVDVCVRNAILDLYGK 400
Query: 178 FGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNL 237
+ EA +F E+ + VSW II + N+M R + PD + ++
Sbjct: 401 CKALVEAYLVFQEMEQRDSVSWNAIIAALEQNECYEDTIAHLNEMLRSGMEPDDFTYGSV 460
Query: 238 ILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSV 297
+ CA + +L L +H +KSG + + + +V MY KCG + A+++ D + + +
Sbjct: 461 LKACAGLQSLEYGLVVHGKAIKSGLGLDAFVSSTVVDMYCKCGAITEAQKLHDRIGGQEL 520
Query: 298 FLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEY 357
W S+I G++ EA F +L V+P+ T AT L CA L ++ GK+I
Sbjct: 521 VSWNSIISGFSLTKQSEEAQRFFSEMLDMGVKPDHFTYATVLDTCANLATIELGKQIHGQ 580
Query: 358 IVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQA 417
I+ + + + ++L+ M++KCG + + +FE+ D W+AMI GYA+HG G +A
Sbjct: 581 IIKQEMLGDEYISSTLVDMYAKCGNMPDSLLMFEKARKLDFVSWNAMICGYALHGQGLEA 640
Query: 418 LNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLV 477
L +F +MQ + P+ + ++L ACSH G++DDG +F M S + + P +EH+ C+V
Sbjct: 641 LEMFERMQRAN-VVPNHATFVAVLRACSHVGLLDDGCQYFHLMTSRYKLVPQLEHFACMV 699
Query: 478 DLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTG 537
D+LGR+ AL+ I MP+E A VW LLS C +VE+ E AA N+L L+P
Sbjct: 700 DILGRSKGPQEALEFIRSMPIEADAVVWKTLLSICKIRQDVEVAETAASNVLRLDPDDAS 759
Query: 538 NYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVD 597
YIL++N++ +G W + + R LM RL KEPG S +E+ + F+ GD+ H S +
Sbjct: 760 VYILLSNVYAGSGKWVDVSRTRRLMRQGRLRKEPGCSWIEVQSEMHGFLVGDKVHPRSKE 819
Query: 598 IRKTLKELHIKLLEAGY 614
+ + L L ++ +GY
Sbjct: 820 VYEMLNSLIGEMKLSGY 836
Score = 178 bits (452), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 121/417 (29%), Positives = 198/417 (47%), Gaps = 19/417 (4%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
M+ G E + + M ++GV + + V ACA + + G +VH +K G
Sbjct: 324 MMVGLVRTGLGAEAMQLFQFMTRSGVGFDVISLSGVFSACAEVKGYFQGLQVHCLAVKSG 383
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F D V+ ++D+Y KC V + V EM R VSWN+II+A + ++ I
Sbjct: 384 FDVDVCVRNAILDLYGKCKALVEAYLVFQEM--EQRDSVSWNAIIAALEQNECYEDTIAH 441
Query: 121 LKEMWVLGLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
L EM G+E T+ SV+ C S G+ +H K GL + ++++V+ MY
Sbjct: 442 LNEMLRSGMEPDDFTYGSVLKACAGLQSLEYGLVVHGKAIKSGLGLDAF-VSSTVVDMYC 500
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K G + EA+ + D IG +VSW +II G+ EA ++M M V PD +
Sbjct: 501 KCGAITEAQKLHDRIGGQELVSWNSIISGFSLTKQSEEAQRFFSEMLDMGVKPDHFTYAT 560
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
++ CA + + L +H ++K ++ + + LV MY KCG++ + +F+ +
Sbjct: 561 VLDTCANLATIELGKQIHGQIIKQEMLGDEYISSTLVDMYAKCGNMPDSLLMFEKARKLD 620
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEE 356
W +MI GYA G EA+ +F+R+ + +V PN AT L AC+ +G L G +
Sbjct: 621 FVSWNAMICGYALHGQGLEALEMFERMQRANVVPNHATFVAVLRACSHVGLLDDGC---Q 677
Query: 357 YIVLNGLESNRQVQTSLIH---MFSKCGRINKAKEVFERVP----DKDLAVWSAMIN 406
Y L + S ++ L H M GR +E E + + D VW +++
Sbjct: 678 YFHL--MTSRYKLVPQLEHFACMVDILGRSKGPQEALEFIRSMPIEADAVVWKTLLS 732
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 114/461 (24%), Positives = 226/461 (49%), Gaps = 16/461 (3%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+I +G F ++ M + GV + T ++LK+C ++ + G ++H+ +K G
Sbjct: 122 LISGYCQHGMFRNSVGLSMEMSRRGVALDRTTLAVLLKSCGGLDDLALGVQIHALAVKTG 181
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+ D + L+DMY KC + + M R+ VSW + I+ C+ +E
Sbjct: 182 LETDVRAGSALVDMYGKCRSLDDALRFFHGMGE--RNSVSWGAAIA----GCVQNEQYTR 235
Query: 121 LKEMWV----LGLELSASTFVSVVSGCSFRQGIS----MHCCVYKLGLLNNEIPLANSVM 172
E++V LGL +S + S C+ +S +H K + +++ + +++
Sbjct: 236 GMELFVQMQRLGLGVSQPAYASAFRSCAAMPCLSTARQLHAHAIK-NVFSSDRVVGTAIV 294
Query: 173 SMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLV 232
+YAK G + +AR F + ++ + ++ G V G EA L M R V D++
Sbjct: 295 DVYAKAGNLVDARRAFIGLPHHNVETCNAMMVGLVRTGLGAEAMQLFQFMTRSGVGFDVI 354
Query: 233 VFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAV 292
+ CA+V F L +H L +KSG++ + + N ++ +Y KC L A VF +
Sbjct: 355 SLSGVFSACAEVKGYFQGLQVHCLAVKSGFDVDVCVRNAILDLYGKCKALVEAYLVFQEM 414
Query: 293 LEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGK 352
++ W ++I Q + + +L++ + P++ T + L ACA L SL G
Sbjct: 415 EQRDSVSWNAIIAALEQNECYEDTIAHLNEMLRSGMEPDDFTYGSVLKACAGLQSLEYGL 474
Query: 353 EIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHG 412
+ + +GL + V ++++ M+ KCG I +A+++ +R+ ++L W+++I+G+++
Sbjct: 475 VVHGKAIKSGLGLDAFVSSTVVDMYCKCGAITEAQKLHDRIGGQELVSWNSIISGFSLTK 534
Query: 413 MGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDG 453
++A F +M + G+KPD Y ++L C++ ++ G
Sbjct: 535 QSEEAQRFFSEMLDM-GVKPDHFTYATVLDTCANLATIELG 574
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 117/496 (23%), Positives = 226/496 (45%), Gaps = 40/496 (8%)
Query: 32 TFPLVLKACANI--NSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLD 89
TF + + CA+ +++ G+ H+ +L GF FV L+ MY++C + V D
Sbjct: 19 TFSHLYQLCASAGRSALTTGQAAHARMLVSGFMPTTFVSNCLLQMYARCGGTAHAHGVFD 78
Query: 90 EMPVRLR-----------------------------SVVSWNSIISAHSRACLNDEAILV 120
MP R VVSWN++IS + + + ++ +
Sbjct: 79 TMPHRDTVSWNTMLTAYVHAGDTDTAASLFGTMPDPDVVSWNTLISGYCQHGMFRNSVGL 138
Query: 121 LKEMWVLGLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
EM G+ L +T ++ C G+ +H K GL ++ ++++ MY
Sbjct: 139 SMEMSRRGVALDRTTLAVLLKSCGGLDDLALGVQIHALAVKTGL-ETDVRAGSALVDMYG 197
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K +++A F +GE + VSW I G V L QM+R+ + + +
Sbjct: 198 KCRSLDDALRFFHGMGERNSVSWGAAIAGCVQNEQYTRGMELFVQMQRLGLGVSQPAYAS 257
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
CA + L A +H+ +K+ ++++ + +V +Y K G+L ARR F + +
Sbjct: 258 AFRSCAAMPCLSTARQLHAHAIKNVFSSDRVVGTAIVDVYAKAGNLVDARRAFIGLPHHN 317
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEE 356
V +M+ G + G +EA+ LF+ + ++ V + +L+ SACAE+ +G ++
Sbjct: 318 VETCNAMMVGLVRTGLGAEAMQLFQFMTRSGVGFDVISLSGVFSACAEVKGYFQGLQVHC 377
Query: 357 YIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQ 416
V +G + + V+ +++ ++ KC + +A VF+ + +D W+A+I + +
Sbjct: 378 LAVKSGFDVDVCVRNAILDLYGKCKALVEAYLVFQEMEQRDSVSWNAIIAALEQNECYED 437
Query: 417 ALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFF-KSMQSNFGIEPSIEHYLC 475
+ +M G++PD Y S+L AC+ ++ GL K+++S G++ +
Sbjct: 438 TIAHLNEMLR-SGMEPDDFTYGSVLKACAGLQSLEYGLVVHGKAIKSGLGLDAFVSS--T 494
Query: 476 LVDLLGRAGRFDLALK 491
+VD+ + G A K
Sbjct: 495 VVDMYCKCGAITEAQK 510
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 86/344 (25%), Positives = 166/344 (48%), Gaps = 5/344 (1%)
Query: 169 NSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVT 228
N++++ Y G + A S+F + + +VSW T+I GY G + GL +M R V
Sbjct: 89 NTMLTAYVHAGDTDTAASLFGTMPDPDVVSWNTLISGYCQHGMFRNSVGLSMEMSRRGVA 148
Query: 229 PDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRV 288
D L+ C + +L L + +H+L +K+G + + LV MY KC L+ A R
Sbjct: 149 LDRTTLAVLLKSCGGLDDLALGVQIHALAVKTGLETDVRAGSALVDMYGKCRSLDDALRF 208
Query: 289 FDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSL 348
F + E++ W + I G Q + + LF ++ + + ++ A+ +CA + L
Sbjct: 209 FHGMGERNSVSWGAAIAGCVQNEQYTRGMELFVQMQRLGLGVSQPAYASAFRSCAAMPCL 268
Query: 349 SKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGY 408
S +++ + + N S+R V T+++ +++K G + A+ F +P ++ +AM+ G
Sbjct: 269 STARQLHAHAIKNVFSSDRVVGTAIVDVYAKAGNLVDARRAFIGLPHHNVETCNAMMVGL 328
Query: 409 AIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFF-KSMQSNFGIE 467
G+G +A+ LF M G+ D + + + SAC+ GL +++S F ++
Sbjct: 329 VRTGLGAEAMQLFQFMTR-SGVGFDVISLSGVFSACAEVKGYFQGLQVHCLAVKSGFDVD 387
Query: 468 PSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSA 511
+ + ++DL G+ A EM + + W +++A
Sbjct: 388 VCVRN--AILDLYGKCKALVEAYLVFQEME-QRDSVSWNAIIAA 428
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 51/225 (22%), Positives = 87/225 (38%), Gaps = 42/225 (18%)
Query: 333 ATLATTLSACAELG--SLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVF 390
AT + CA G +L+ G+ ++++G V L+ M+++CG A VF
Sbjct: 18 ATFSHLYQLCASAGRSALTTGQAAHARMLVSGFMPTTFVSNCLLQMYARCGGTAHAHGVF 77
Query: 391 ERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMV 450
+ +P +D W+ M+ Y G D A +LF M PD V + +++S GM
Sbjct: 78 DTMPHRDTVSWNTMLTAYVHAGDTDTAASLFGTMP-----DPDVVSWNTLISGYCQHGMF 132
Query: 451 DD--GLSF--------------------------------FKSMQSNFGIEPSIEHYLCL 476
+ GLS ++ G+E + L
Sbjct: 133 RNSVGLSMEMSRRGVALDRTTLAVLLKSCGGLDDLALGVQIHALAVKTGLETDVRAGSAL 192
Query: 477 VDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELG 521
VD+ G+ D AL+ H M E + W ++ C+++ G
Sbjct: 193 VDMYGKCRSLDDALRFFHGMG-ERNSVSWGAAIAGCVQNEQYTRG 236
>gi|413937268|gb|AFW71819.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 830
Score = 339 bits (870), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 194/620 (31%), Positives = 336/620 (54%), Gaps = 14/620 (2%)
Query: 9 GSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQ 68
G + +S + M GV N FTF VL A+ + G+ VH+ +K G FV
Sbjct: 136 GVLLDVMSLFFRMRAEGVWPNPFTFSSVLSMVASQGMVDLGQHVHAQSIKFGCCSTVFVC 195
Query: 69 TGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLG 128
L++MY+KC +R V M R +VSWN++++ + EA+ + +
Sbjct: 196 NSLMNMYAKCGLVEEARVVFCRMETR--DMVSWNTLMAGLVLNGRDLEALQLFHDSRSSI 253
Query: 129 LELSASTFVSVVSGCSFRQGI----SMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEA 184
L+ ST+ +V++ C+ + + +H V K G ++ + ++M Y K G++++A
Sbjct: 254 TMLTESTYSTVINLCANLKHLGLARQLHSSVLKHGF-HSYGNVMTALMDAYNKAGQLDKA 312
Query: 185 RSIFDEI-GETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQ 243
+F + G ++VSWT +I G + G++ A L ++MR V P+ + + ++
Sbjct: 313 LDVFLLMSGSQNVVSWTAMIDGCIQNGDIPLAAALFSRMREDGVAPNDLTYSTIL----T 368
Query: 244 VGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSM 303
V +H+ ++K+ Y + L+ Y+K E A +F + +K V W++M
Sbjct: 369 VSEASFPPQIHAQVIKTNYECTPTVGTALMVSYSKLCSTEEALSIFKMIDQKDVVSWSAM 428
Query: 304 IGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGS-LSKGKEIEEYIVLNG 362
+ YAQ G + A N F ++ ++PNE T+++ + ACA + + G++ + +
Sbjct: 429 LTCYAQAGDCNGATNAFIKMTMHGLKPNEFTISSAIDACASPAAGVDLGRQFHAISIKHR 488
Query: 363 LESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFY 422
V ++L+ M+++ G I A+ VFER D+DL W++M++GYA HG +AL++F
Sbjct: 489 CHDALCVSSALVSMYARKGSIENAQCVFERQTDRDLLSWNSMLSGYAQHGYSQKALDVFR 548
Query: 423 KMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGR 482
+M+ VEG+ D + + S++ C+H+G+V++G +F M ++GI P+++HY C+VDL R
Sbjct: 549 QME-VEGIDMDGLTFLSVIMGCAHAGLVEEGQQYFDLMVRDYGITPTMDHYACMVDLYSR 607
Query: 483 AGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILM 542
AG+ D + I MP +W LL AC H NVELG+ AA+ LL+L P + Y+L+
Sbjct: 608 AGKLDETMSLIEGMPFPAGPTIWRALLGACRVHKNVELGKLAAEKLLSLEPLDSATYVLL 667
Query: 543 ANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTL 602
+N++++AG WKE R LMD +++ KE G S ++I V F+A D+SH LS I L
Sbjct: 668 SNIYSAAGKWKEKDEVRKLMDTKKVRKEAGCSWIQIKNKVHFFIASDKSHPLSEQIYAKL 727
Query: 603 KELHIKLLEAGYIAEADIVP 622
+ + KL + GY + VP
Sbjct: 728 RAMTAKLKQEGYCPDTSFVP 747
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 144/491 (29%), Positives = 232/491 (47%), Gaps = 25/491 (5%)
Query: 36 VLKACANINSIWDGKRVHSHVLKVGFQQ-DAFVQTGLIDMYSKCSDFVSSRKVLDEMPVR 94
++K C ++ GK++H+ ++ G D V T L+DMY + RKV + M
Sbjct: 61 IIKICGSVPDRVLGKQLHALCVRCGHDHGDIRVGTSLVDMYMNWHSVLDGRKVFEGM--L 118
Query: 95 LRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCSFRQ----GIS 150
R+VV+W S+++ + +A + + + + M G+ + TF SV+S + + G
Sbjct: 119 KRNVVTWTSLLTGYIQAGVLLDVMSLFFRMRAEGVWPNPFTFSSVLSMVASQGMVDLGQH 178
Query: 151 MHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVG 210
+H K G + + + NS+M+MYAK G V EAR +F + +VSW T++ G V G
Sbjct: 179 VHAQSIKFGCCST-VFVCNSLMNMYAKCGLVEEARVVFCRMETRDMVSWNTLMAGLVLNG 237
Query: 211 NVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDN 270
EA L + R + +I CA + +L LA +HS +LK G+++ +
Sbjct: 238 RDLEALQLFHDSRSSITMLTESTYSTVINLCANLKHLGLARQLHSSVLKHGFHSYGNVMT 297
Query: 271 LLVSMYTKCGDLELARRVFDAVL-EKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVR 329
L+ Y K G L+ A VF + ++V WT+MI G Q G A LF R+ + V
Sbjct: 298 ALMDAYNKAGQLDKALDVFLLMSGSQNVVSWTAMIDGCIQNGDIPLAAALFSRMREDGVA 357
Query: 330 PNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEV 389
PN+ T +T L+ + S +I ++ E V T+L+ +SK +A +
Sbjct: 358 PNDLTYSTILT----VSEASFPPQIHAQVIKTNYECTPTVGTALMVSYSKLCSTEEALSI 413
Query: 390 FERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSAC-SHSG 448
F+ + KD+ WSAM+ YA G + A N F KM + GLKP+ +S + AC S +
Sbjct: 414 FKMIDQKDVVSWSAMLTCYAQAGDCNGATNAFIKMT-MHGLKPNEFTISSAIDACASPAA 472
Query: 449 MVDDGLSFFKSMQSNFGIEPSIEHYLC----LVDLLGRAGRFDLALKTIHEMPVEVQAQV 504
VD G F I+ LC LV + R G + A + + E +
Sbjct: 473 GVDLGRQFHA-----ISIKHRCHDALCVSSALVSMYARKGSIENA-QCVFERQTDRDLLS 526
Query: 505 WAPLLSACMKH 515
W +LS +H
Sbjct: 527 WNSMLSGYAQH 537
>gi|356551789|ref|XP_003544256.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Glycine max]
Length = 758
Score = 339 bits (869), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 188/599 (31%), Positives = 334/599 (55%), Gaps = 20/599 (3%)
Query: 31 FTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDE 90
F PL L+ C + S + + VH HV+K G + FV + L+++Y+KC + +R+V D
Sbjct: 69 FYVPL-LQQCLDTRSYSETQIVHGHVMKTGCHDNFFVMSFLVNVYAKCGNMEDARRVFDN 127
Query: 91 MPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCSFRQGIS 150
M +R R+VV+W +++ + AI V +EM G S T +V+ CS Q +
Sbjct: 128 M-LR-RNVVAWTTLMVGFVQNSQPKHAIHVFQEMLYAGSYPSVYTLSAVLHACSSLQSLK 185
Query: 151 M----HCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGY 206
+ H + K + + + + +++ S+Y+K G++ +A F I E +++SWT+ +
Sbjct: 186 LGDQFHAYIIKYHV-DFDASVGSALCSLYSKCGRLEDALKTFSRIREKNVISWTSAVSAC 244
Query: 207 VNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNED 266
+ G + L +M + + P+ + + C ++ +L L ++SL +K GY +
Sbjct: 245 ADNGAPVKGLRLFVEMIAVDIKPNEFTLTSALSQCCEILSLELGTQVYSLCIKFGYESNL 304
Query: 267 PLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQL-----------GYPSE 315
+ N L+ +Y K G + A R+F+ + + S+ W +MI G+AQ+ SE
Sbjct: 305 RVRNSLLYLYLKSGCIVEAHRLFNRMDDASMVTWNAMIAGHAQMMELTKDNLSACHRGSE 364
Query: 316 AVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIH 375
A+ LF +L + ++P+ TL++ LS C+ + ++ +G++I + G S+ V TSLI
Sbjct: 365 ALKLFSKLNLSGMKPDLFTLSSVLSVCSRMLAIEQGEQIHAQTIKTGFLSDVIVSTSLIS 424
Query: 376 MFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAV 435
M+SKCG I +A + F + + + W++MI G++ HGM QAL++F M + G++P+AV
Sbjct: 425 MYSKCGSIERASKAFLEMSTRTMIAWTSMITGFSQHGMSQQALHIFEDMS-LAGVRPNAV 483
Query: 436 VYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHE 495
+ +LSACSH+GMV L++F+ MQ + I+P+++HY C+VD+ R GR + AL I +
Sbjct: 484 TFVGVLSACSHAGMVSQALNYFEIMQKKYKIKPAMDHYECMVDMFVRLGRLEQALNFIKK 543
Query: 496 MPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEA 555
M E +W+ ++ C H N+ELG YAA+ LL+L P Y+L+ N++ SA +++
Sbjct: 544 MNYEPSEFIWSNFIAGCKSHGNLELGFYAAEQLLSLKPKDPETYVLLLNMYLSAERFEDV 603
Query: 556 ATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKELHIKLLEAGY 614
+ R +M++ ++ K WS + I V F ++H S I K+L++L K+ GY
Sbjct: 604 SRVRKMMEEEKVGKLKDWSWISIKDKVYSFKTNGKTHPQSSLICKSLEDLLAKVKNVGY 662
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 115/459 (25%), Positives = 225/459 (49%), Gaps = 34/459 (7%)
Query: 7 NNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAF 66
N + + + ML G + + +T VL AC+++ S+ G + H++++K DA
Sbjct: 145 QNSQPKHAIHVFQEMLYAGSYPSVYTLSAVLHACSSLQSLKLGDQFHAYIIKYHVDFDAS 204
Query: 67 VQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWV 126
V + L +YSKC + K +R ++V+SW S +SA + + + + EM
Sbjct: 205 VGSALCSLYSKCGRLEDALKTFSR--IREKNVISWTSAVSACADNGAPVKGLRLFVEMIA 262
Query: 127 LGLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVN 182
+ ++ + T S +S C S G ++ K G +N + + NS++ +Y K G +
Sbjct: 263 VDIKPNEFTLTSALSQCCEILSLELGTQVYSLCIKFGYESN-LRVRNSLLYLYLKSGCIV 321
Query: 183 EARSIFDEIGETSIVSWTTIIGGYVNVGNV-----------NEAFGLCNQMRRMSVTPDL 231
EA +F+ + + S+V+W +I G+ + + +EA L +++ + PDL
Sbjct: 322 EAHRLFNRMDDASMVTWNAMIAGHAQMMELTKDNLSACHRGSEALKLFSKLNLSGMKPDL 381
Query: 232 VVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDA 291
+++ C+++ + +H+ +K+G+ ++ + L+SMY+KCG +E A + F
Sbjct: 382 FTLSSVLSVCSRMLAIEQGEQIHAQTIKTGFLSDVIVSTSLISMYSKCGSIERASKAFLE 441
Query: 292 VLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKG 351
+ +++ WTSMI G++Q G +A+++F+ + VRPN T LSAC+ G +S+
Sbjct: 442 MSTRTMIAWTSMITGFSQHGMSQQALHIFEDMSLAGVRPNAVTFVGVLSACSHAGMVSQA 501
Query: 352 KEIEEYIVLNGLESNRQVQTSLIH------MFSKCGRINKAKEVFERVP-DKDLAVWSAM 404
E ++ +++ ++ H MF + GR+ +A +++ + +WS
Sbjct: 502 LNYFEI-----MQKKYKIKPAMDHYECMVDMFVRLGRLEQALNFIKKMNYEPSEFIWSNF 556
Query: 405 INGYAIHGMGDQALNLFYKMQHVEGLKP-DAVVYTSILS 442
I G HG + FY + + LKP D Y +L+
Sbjct: 557 IAGCKSHGNLELG---FYAAEQLLSLKPKDPETYVLLLN 592
Score = 99.0 bits (245), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 77/286 (26%), Positives = 134/286 (46%), Gaps = 35/286 (12%)
Query: 13 ETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLI 72
E L +S + +G+ + FT VL C+ + +I G+++H+ +K GF D V T LI
Sbjct: 364 EALKLFSKLNLSGMKPDLFTLSSVLSVCSRMLAIEQGEQIHAQTIKTGFLSDVIVSTSLI 423
Query: 73 DMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELS 132
MYSKC + K EM R++++W S+I+ S+ ++ +A+ + ++M + G+ +
Sbjct: 424 SMYSKCGSIERASKAFLEMST--RTMIAWTSMITGFSQHGMSQQALHIFEDMSLAGVRPN 481
Query: 133 ASTFVSVVSGCSFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIG 192
A TFV V+S CS G+++ + N M K+ K+ A ++
Sbjct: 482 AVTFVGVLSACS------------HAGMVSQAL---NYFEIMQKKY-KIKPAMDHYE--- 522
Query: 193 ETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALS 252
++ +V +G + +A N +++M+ P ++ N I GC GNL L
Sbjct: 523 --------CMVDMFVRLGRLEQAL---NFIKKMNYEPSEFIWSNFIAGCKSHGNLELGFY 571
Query: 253 MHSLLLKSGYNNEDPLDN-LLVSMYTKCGDLELARRVFDAVLEKSV 297
LL +DP LL++MY E RV + E+ V
Sbjct: 572 AAEQLL--SLKPKDPETYVLLLNMYLSAERFEDVSRVRKMMEEEKV 615
>gi|297740529|emb|CBI30711.3| unnamed protein product [Vitis vinifera]
Length = 697
Score = 339 bits (869), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 185/514 (35%), Positives = 282/514 (54%), Gaps = 28/514 (5%)
Query: 130 ELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEAR 185
+L T+ SV+ C S + G +H + + + + L + ++ MY G + E R
Sbjct: 98 DLELRTYCSVLQLCADLKSIQDGRRIHSIIQSNDVEVDGV-LGSKLVFMYVTCGDLREGR 156
Query: 186 SIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTP--------------DL 231
IFD++ + W ++ GY +GN E+ L +MR + + D+
Sbjct: 157 RIFDKVANEKVFLWNLLMNGYAKIGNFRESLSLFKRMRELGIRRVESARKLFDELGDRDV 216
Query: 232 VVFLNLILGCAQVGNLFLALSMHSLLLKSGYNN--------EDPLDNLLVSMYTKCGDLE 283
+ + ++I G G L + +L G N E L+N L+ MY+K G+L
Sbjct: 217 ISWNSMISGYVSNGLSEKGLDLFEQMLLLGINTDLATMVSVELTLNNCLLDMYSKSGNLN 276
Query: 284 LARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACA 343
A +VF+ + E+SV WTSMI GYA+ G +V LF + K + PN T+A L ACA
Sbjct: 277 SAIQVFETMGERSVVSWTSMIAGYAREGLSDMSVRLFHEMEKEDLFPNSITMACILPACA 336
Query: 344 ELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSA 403
L +L +G+EI +I+ NG +R V +L+ M+ KCG + A+ +F+ +P+KDL W+
Sbjct: 337 SLAALERGQEIHGHILRNGFSLDRHVANALVDMYLKCGALGLARLLFDMIPEKDLVSWTV 396
Query: 404 MINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSN 463
MI GY +HG G +A+ F +M++ G++PD V + SIL ACSHSG++D+G FF M++N
Sbjct: 397 MIAGYGMHGYGSEAIAAFNEMRN-SGIEPDEVSFISILYACSHSGLLDEGWGFFNMMRNN 455
Query: 464 FGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEY 523
IEP EHY C+VDLL RAG A K I MP+E A +W LL C +H+V+L E
Sbjct: 456 CCIEPKSEHYACIVDLLARAGNLSKAYKFIKMMPIEPDATIWGALLCGCRIYHDVKLAEK 515
Query: 524 AAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQ 583
A+++ L P +TG Y+L+AN++ A W+E R + R L K PG S +EI G V
Sbjct: 516 VAEHVFELEPENTGYYVLLANIYAEAEKWEEVKKLRERIGRRGLRKNPGCSWIEIKGKVH 575
Query: 584 VFVAGDRSHHLSVDIRKTLKELHIKLLEAGYIAE 617
+FV GD SH L+ I LK+ ++ E G+ +
Sbjct: 576 IFVTGDSSHPLANKIELLLKKTRTRMKEEGHFPK 609
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 123/461 (26%), Positives = 218/461 (47%), Gaps = 78/461 (16%)
Query: 32 TFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLD-- 89
T+ VL+ CA++ SI DG+R+HS + + D + + L+ MY C D R++ D
Sbjct: 103 TYCSVLQLCADLKSIQDGRRIHSIIQSNDVEVDGVLGSKLVFMYVTCGDLREGRRIFDKV 162
Query: 90 --------------------------------EMPVRL-------------RSVVSWNSI 104
E+ +R R V+SWNS+
Sbjct: 163 ANEKVFLWNLLMNGYAKIGNFRESLSLFKRMRELGIRRVESARKLFDELGDRDVISWNSM 222
Query: 105 ISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGLLNNE 164
IS + L+++ + + ++M +LG+ +T VSV E
Sbjct: 223 ISGYVSNGLSEKGLDLFEQMLLLGINTDLATMVSV------------------------E 258
Query: 165 IPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRR 224
+ L N ++ MY+K G +N A +F+ +GE S+VSWT++I GY G + + L ++M +
Sbjct: 259 LTLNNCLLDMYSKSGNLNSAIQVFETMGERSVVSWTSMIAGYAREGLSDMSVRLFHEMEK 318
Query: 225 MSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLEL 284
+ P+ + ++ CA + L +H +L++G++ + + N LV MY KCG L L
Sbjct: 319 EDLFPNSITMACILPACASLAALERGQEIHGHILRNGFSLDRHVANALVDMYLKCGALGL 378
Query: 285 ARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAE 344
AR +FD + EK + WT MI GY GY SEA+ F + + + P+E + + L AC+
Sbjct: 379 ARLLFDMIPEKDLVSWTVMIAGYGMHGYGSEAIAAFNEMRNSGIEPDEVSFISILYACSH 438
Query: 345 LGSLSKGKEIEEYIVLN-GLESNRQVQTSLIHMFSKCGRINKAKEVFERVP-DKDLAVWS 402
G L +G + N +E + ++ + ++ G ++KA + + +P + D +W
Sbjct: 439 SGLLDEGWGFFNMMRNNCCIEPKSEHYACIVDLLARAGNLSKAYKFIKMMPIEPDATIWG 498
Query: 403 AMINGYAIHGMGDQALNLFYKM-QHVEGLKPDAVVYTSILS 442
A++ G I+ + L K+ +HV L+P+ Y +L+
Sbjct: 499 ALLCGCRIY----HDVKLAEKVAEHVFELEPENTGYYVLLA 535
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 109/250 (43%), Gaps = 32/250 (12%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI G + ++ + M + + NS T +L ACA++ ++ G+ +H H+L+ G
Sbjct: 296 MIAGYAREGLSDMSVRLFHEMEKEDLFPNSITMACILPACASLAALERGQEIHGHILRNG 355
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F D V L+DMY KC +R + D +P + +VSW +I+ + EAI
Sbjct: 356 FSLDRHVANALVDMYLKCGALGLARLLFDMIPE--KDLVSWTVMIAGYGMHGYGSEAIAA 413
Query: 121 LKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGK 180
EM G+E +F+S++ CS GLL+ +G
Sbjct: 414 FNEMRNSGIEPDEVSFISILYACSHS------------GLLDE-------------GWGF 448
Query: 181 VNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILG 240
N R+ + E + I+ GN+++A+ ++ M + PD ++ L+ G
Sbjct: 449 FNMMRN--NCCIEPKSEHYACIVDLLARAGNLSKAYKF---IKMMPIEPDATIWGALLCG 503
Query: 241 CAQVGNLFLA 250
C ++ LA
Sbjct: 504 CRIYHDVKLA 513
>gi|334184142|ref|NP_178563.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|334302883|sp|Q9SJ73.3|PP148_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g04860
gi|330250783|gb|AEC05877.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 692
Score = 339 bits (869), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 188/577 (32%), Positives = 327/577 (56%), Gaps = 7/577 (1%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+I + NG + + MLQ G ++ T +L C + G+ VH K G
Sbjct: 122 LICGYSRNGYECDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSG 181
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+ D+ V+ LI YSKC++ S+ + EM + +S VSWN++I A+S++ L +EAI V
Sbjct: 182 LELDSQVKNALISFYSKCAELGSAEVLFREM--KDKSTVSWNTMIGAYSQSGLQEEAITV 239
Query: 121 LKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGK 180
K M+ +E+S T ++++S + +HC V K G++N +I + S++ Y++ G
Sbjct: 240 FKNMFEKNVEISPVTIINLLSAHVSHE--PLHCLVVKCGMVN-DISVVTSLVCAYSRCGC 296
Query: 181 VNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILG 240
+ A ++ + SIV T+I+ Y G+++ A ++ R++ + D V + ++ G
Sbjct: 297 LVSAERLYASAKQDSIVGLTSIVSCYAEKGDMDIAVVYFSKTRQLCMKIDAVALVGILHG 356
Query: 241 CAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLW 300
C + ++ + +S+H +KSG + + N L++MY+K D+E +F+ + E + W
Sbjct: 357 CKKSSHIDIGMSLHGYAIKSGLCTKTLVVNGLITMYSKFDDVETVLFLFEQLQETPLISW 416
Query: 301 TSMIGGYAQLGYPSEAVNLFKRLLKTS-VRPNEATLATTLSACAELGSLSKGKEIEEYIV 359
S+I G Q G S A +F +++ T + P+ T+A+ L+ C++L L+ GKE+ Y +
Sbjct: 417 NSVISGCVQSGRASTAFEVFHQMMLTGGLLPDAITIASLLAGCSQLCCLNLGKELHGYTL 476
Query: 360 LNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALN 419
N E+ V T+LI M++KCG +A+ VF+ + A W++MI+GY++ G+ +AL+
Sbjct: 477 RNNFENENFVCTALIDMYAKCGNEVQAESVFKSIKAPCTATWNSMISGYSLSGLQHRALS 536
Query: 420 LFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDL 479
+ +M+ +GLKPD + + +LSAC+H G VD+G F++M FGI P+++HY +V L
Sbjct: 537 CYLEMRE-KGLKPDEITFLGVLSACNHGGFVDEGKICFRAMIKEFGISPTLQHYALMVGL 595
Query: 480 LGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNY 539
LGRA F AL I +M ++ + VW LLSAC+ H +E+GEY A+ + L+ + G Y
Sbjct: 596 LGRACLFTEALYLIWKMDIKPDSAVWGALLSACIIHRELEVGEYVARKMFMLDYKNGGLY 655
Query: 540 ILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQV 576
+LM+NL+ + MW + R +M D G SQ+
Sbjct: 656 VLMSNLYATEAMWDDVVRVRNMMKDNGYDGYLGVSQI 692
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 141/525 (26%), Positives = 253/525 (48%), Gaps = 38/525 (7%)
Query: 15 LSTYSSMLQTGVHGNSFTFPLVLKACA-NINSI-WDGKRVHSHVLKVGFQQDAFVQTGLI 72
++ + +L++ + N FT + L+A + NS ++V +H+ K G + +V+T L+
Sbjct: 33 ITIFRDLLRSSLTPNHFTMSIFLQATTTSFNSFKLQVEQVQTHLTKSGLDRFVYVKTSLL 92
Query: 73 DMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELS 132
++Y K S++ + DEMP R V WN++I +SR +A + M G S
Sbjct: 93 NLYLKKGCVTSAQMLFDEMPER--DTVVWNALICGYSRNGYECDAWKLFIVMLQQGFSPS 150
Query: 133 ASTFVSVVSGCS----FRQGISMHCCVYKLGL-LNNEIPLANSVMSMYAKFGKVNEARSI 187
A+T V+++ C QG S+H K GL L++++ N+++S Y+K ++ A +
Sbjct: 151 ATTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLELDSQVK--NALISFYSKCAELGSAEVL 208
Query: 188 FDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNL 247
F E+ + S VSW T+IG Y G EA + M +V V +NL+ A V +
Sbjct: 209 FREMKDKSTVSWNTMIGAYSQSGLQEEAITVFKNMFEKNVEISPVTIINLL--SAHVSH- 265
Query: 248 FLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGY 307
+H L++K G N+ + LV Y++CG L A R++ + + S+ TS++ Y
Sbjct: 266 ---EPLHCLVVKCGMVNDISVVTSLVCAYSRCGCLVSAERLYASAKQDSIVGLTSIVSCY 322
Query: 308 AQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNR 367
A+ G AV F + + ++ + L L C + + G + Y + +GL +
Sbjct: 323 AEKGDMDIAVVYFSKTRQLCMKIDAVALVGILHGCKKSSHIDIGMSLHGYAIKSGLCTKT 382
Query: 368 QVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHV 427
V LI M+SK + +FE++ + L W+++I+G G A +F++M
Sbjct: 383 LVVNGLITMYSKFDDVETVLFLFEQLQETPLISWNSVISGCVQSGRASTAFEVFHQMMLT 442
Query: 428 EGLKPDAVVYTSILSACSHSGMVDDGLSFFK-SMQSNFGIEPSIEHYLC--LVDLLGRAG 484
GL PDA+ S+L+ CS ++ G ++++NF E+++C L+D+ + G
Sbjct: 443 GGLLPDAITIASLLAGCSQLCCLNLGKELHGYTLRNNF----ENENFVCTALIDMYAKCG 498
Query: 485 RFDLALKTIHEMPVEVQAQ-VWAPLLSACMKHHNVELGEYAAKNL 528
EVQA+ V+ + + C N + Y+ L
Sbjct: 499 N-------------EVQAESVFKSIKAPCTATWNSMISGYSLSGL 530
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 89/362 (24%), Positives = 160/362 (44%), Gaps = 47/362 (12%)
Query: 257 LLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEA 316
L KSG + + L+++Y K G + A+ +FD + E+ +W ++I GY++ GY +A
Sbjct: 76 LTKSGLDRFVYVKTSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNALICGYSRNGYECDA 135
Query: 317 VNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHM 376
LF +L+ P+ TL L C + G +S+G+ + +GLE + QV+ +LI
Sbjct: 136 WKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLELDSQVKNALISF 195
Query: 377 FSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKM--QHVE------ 428
+SKC + A+ +F + DK W+ MI Y+ G+ ++A+ +F M ++VE
Sbjct: 196 YSKCAELGSAEVLFREMKDKSTVSWNTMIGAYSQSGLQEEAITVFKNMFEKNVEISPVTI 255
Query: 429 --------------------GLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEP 468
G+ D V TS++ A S G + + S + +
Sbjct: 256 INLLSAHVSHEPLHCLVVKCGMVNDISVVTSLVCAYSRCGCLVSAERLYASAKQD----- 310
Query: 469 SIEHYLCLVDLLGRAGRFDLAL---KTIHEMPVEVQAQVWAPLLSACMKHHNVELG---- 521
SI +V G D+A+ ++ +++ A +L C K ++++G
Sbjct: 311 SIVGLTSIVSCYAEKGDMDIAVVYFSKTRQLCMKIDAVALVGILHGCKKSSHIDIGMSLH 370
Query: 522 EYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGS 581
YA K+ G +++ L T + + T L + + T W+ V I G
Sbjct: 371 GYAIKS------GLCTKTLVVNGLITMYSKFDDVETVLFLFEQLQETPLISWNSV-ISGC 423
Query: 582 VQ 583
VQ
Sbjct: 424 VQ 425
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 79/144 (54%), Gaps = 3/144 (2%)
Query: 314 SEAVNLFKRLLKTSVRPNEATLATTLSACA-ELGSLS-KGKEIEEYIVLNGLESNRQVQT 371
S + +F+ LL++S+ PN T++ L A S + ++++ ++ +GL+ V+T
Sbjct: 30 SSPITIFRDLLRSSLTPNHFTMSIFLQATTTSFNSFKLQVEQVQTHLTKSGLDRFVYVKT 89
Query: 372 SLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLK 431
SL++++ K G + A+ +F+ +P++D VW+A+I GY+ +G A LF M +G
Sbjct: 90 SLLNLYLKKGCVTSAQMLFDEMPERDTVVWNALICGYSRNGYECDAWKLFIVMLQ-QGFS 148
Query: 432 PDAVVYTSILSACSHSGMVDDGLS 455
P A ++L C G V G S
Sbjct: 149 PSATTLVNLLPFCGQCGFVSQGRS 172
>gi|147856409|emb|CAN80331.1| hypothetical protein VITISV_018275 [Vitis vinifera]
Length = 681
Score = 339 bits (869), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 187/592 (31%), Positives = 317/592 (53%), Gaps = 9/592 (1%)
Query: 36 VLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRL 95
V++ A + GK++H+ ++ G+ F+ L++MYSKC + + K+ D MP
Sbjct: 11 VIQTYAKTKRLRRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALKLFDTMP--Q 68
Query: 96 RSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGC----SFRQGISM 151
R++VSW ++IS S+ EAI M + G + F S + C S G M
Sbjct: 69 RNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMGKQM 128
Query: 152 HCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGN 211
HC K G+ +E+ + +++ MY+K G + +A +F+E+ VSWT +I GY +G
Sbjct: 129 HCLALKFGI-GSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKIGE 187
Query: 212 VNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNL 271
EA +M VT D V + + C + S+HS ++K G+ ++ + N
Sbjct: 188 FEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVGNA 247
Query: 272 LVSMYTKCGDLELARRVFDAVLE-KSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRP 330
L MY+K GD+E A VF E ++V +T +I GY + + +++F L + + P
Sbjct: 248 LTDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGIEP 307
Query: 331 NEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVF 390
NE T ++ + ACA +L +G ++ ++ + + V + L+ M+ KCG + A + F
Sbjct: 308 NEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEHAIQAF 367
Query: 391 ERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMV 450
+ + D W+++++ + HG+G A+ F +M G+KP+A+ + S+L+ CSH+G+V
Sbjct: 368 DEIGDPTEIAWNSLVSVFGQHGLGKDAIKFFERMVD-RGVKPNAITFISLLTGCSHAGLV 426
Query: 451 DDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLS 510
++GL +F SM +G+ P EHY C++DLLGRAGR A + I+ MP E A W L
Sbjct: 427 EEGLDYFYSMDKTYGVVPGEEHYSCVIDLLGRAGRLKEAKEFINRMPFEPNAFGWCSFLG 486
Query: 511 ACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKE 570
AC H + E+G+ AA+ L+ L P ++G +L++N++ + W++ + R M D + K
Sbjct: 487 ACRIHGDKEMGKLAAEKLVKLEPKNSGALVLLSNIYANERQWEDVRSVRMRMRDGNVKKL 546
Query: 571 PGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKELHIKLLEAGYIAEADIVP 622
PG+S V++ VF A D SH I + L L ++ AGY+ D VP
Sbjct: 547 PGYSWVDVGYKTHVFGAEDWSHXRKSAIYEKLDXLLDQIKAAGYVPXTDSVP 598
Score = 206 bits (525), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 129/439 (29%), Positives = 220/439 (50%), Gaps = 21/439 (4%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI + N F E + T+ M G F F ++ACA++ SI GK++H LK G
Sbjct: 77 MISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMGKQMHCLALKFG 136
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+ FV + L DMYSKC + KV +EMP + VSW ++I +S+ +EA+L
Sbjct: 137 IGSELFVGSNLEDMYSKCGAMFDACKVFEEMPC--KDEVSWTAMIDGYSKIGEFEEALLA 194
Query: 121 LKEMWVLGLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
K+M + + S + C + + G S+H V KLG ++I + N++ MY+
Sbjct: 195 FKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLG-FESDIFVGNALTDMYS 253
Query: 177 KFGKVNEARSIFDEIGET-SIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFL 235
K G + A ++F E ++VS+T +I GYV + + + ++RR + P+ F
Sbjct: 254 KAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGIEPNEFTFS 313
Query: 236 NLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEK 295
+LI CA L +H+ ++K ++ + + ++LV MY KCG LE A + FD + +
Sbjct: 314 SLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEHAIQAFDEIGDP 373
Query: 296 SVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEI- 354
+ W S++ + Q G +A+ F+R++ V+PN T + L+ C+ G + +G +
Sbjct: 374 TEIAWNSLVSVFGQHGLGKDAIKFFERMVDRGVKPNAITFISLLTGCSHAGLVEEGLDYF 433
Query: 355 ----EEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAV-WSAMINGYA 409
+ Y V+ G E + +I + + GR+ +AKE R+P + A W + +
Sbjct: 434 YSMDKTYGVVPGEEH----YSCVIDLLGRAGRLKEAKEFINRMPFEPNAFGWCSFLGACR 489
Query: 410 IHG---MGDQALNLFYKMQ 425
IHG MG A K++
Sbjct: 490 IHGDKEMGKLAAEKLVKLE 508
>gi|224124638|ref|XP_002330073.1| predicted protein [Populus trichocarpa]
gi|222871498|gb|EEF08629.1| predicted protein [Populus trichocarpa]
Length = 793
Score = 338 bits (868), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 200/645 (31%), Positives = 327/645 (50%), Gaps = 70/645 (10%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
M++ S + + Y ML++ V +++T+P++ ++C+ + +DGK + HVLKVG
Sbjct: 97 MMKGYMQRNSPCKAIWVYKFMLESNVAADNYTYPILFQSCSIRLAEFDGKCIQDHVLKVG 156
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F D ++Q LI+MY+ C + +RKV D V +VSWNS+++ + +EA V
Sbjct: 157 FDSDVYIQNTLINMYAVCGNLSDARKVFDGSSVL--DMVSWNSMLAGYVLVGNVEEAKDV 214
Query: 121 LKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGK 180
M + +NS++ ++ K G
Sbjct: 215 YDRM------------------------------------PERNVIASNSMIVLFGKKGN 238
Query: 181 VNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILG 240
V EA +F+E+ + +VSW+ +I Y EA L +M + D VV L+++
Sbjct: 239 VEEACKLFNEMKQKDLVSWSALISCYEQNEMYEEALILFKEMNANGIMVDEVVVLSVLSA 298
Query: 241 CAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYT----------------------- 277
C+++ + +H L++K G L N L+ MY+
Sbjct: 299 CSRLLVVITGKLVHGLVVKVGIETYVNLQNALIHMYSSCEEVVTAQKLFSESCCLDQISW 358
Query: 278 --------KCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVR 329
KCG++E AR +FD++ +K W++MI GYAQ +E + LF+ + +
Sbjct: 359 NSMISGYVKCGEIEKARALFDSMPDKDNVSWSAMISGYAQQDRFTETLVLFQEMQIEGTK 418
Query: 330 PNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEV 389
P+E L + +SAC L +L +GK I YI NGL+ N + T+LI+M+ K G + A EV
Sbjct: 419 PDETILVSVISACTHLAALDQGKWIHAYIRKNGLKINIILGTTLINMYMKLGCVEDALEV 478
Query: 390 FERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGM 449
F+ + +K ++ W+A+I G A++G+ D++L F +M+ G+ P+ + + ++L AC H G+
Sbjct: 479 FKGLEEKGVSTWNALILGLAMNGLVDKSLKTFSEMKE-HGVTPNEITFVAVLGACRHMGL 537
Query: 450 VDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLL 509
VD+G F SM I P+I+HY C+VDLLGRAG A + I MP+ W LL
Sbjct: 538 VDEGHRHFNSMIQEHKIGPNIKHYGCMVDLLGRAGMLKEAEELIESMPMAPDVSTWGALL 597
Query: 510 SACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTK 569
AC K+ + E GE + L+ L+P G +L++N++ S G W + RG+M + K
Sbjct: 598 GACKKYGDNETGERIGRKLVELHPDHDGFNVLLSNIYASKGNWVDVLEVRGMMRQHGVVK 657
Query: 570 EPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKELHIKLLEAGY 614
PG S +E G V F+AGD++H + I L E+ KL GY
Sbjct: 658 TPGCSMIEAHGRVHEFLAGDKTHPQNEHIEHMLDEMAKKLKLEGY 702
Score = 119 bits (297), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 122/515 (23%), Positives = 201/515 (39%), Gaps = 147/515 (28%)
Query: 178 FGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNL 237
F +N++ IF I + T++ GY+ + +A + M +V D + L
Sbjct: 73 FININQSYQIFSHIENPNGFICNTMMKGYMQRNSPCKAIWVYKFMLESNVAADNYTYPIL 132
Query: 238 ILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSV 297
C+ F + +LK G++++ + N L++MY CG+L AR+VFD +
Sbjct: 133 FQSCSIRLAEFDGKCIQDHVLKVGFDSDVYIQNTLINMYAVCGNLSDARKVFDGSSVLDM 192
Query: 298 FLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLA--------------------- 336
W SM+ GY +G EA +++ R+ + +V + + +
Sbjct: 193 VSWNSMLAGYVLVGNVEEAKDVYDRMPERNVIASNSMIVLFGKKGNVEEACKLFNEMKQK 252
Query: 337 -----TTLSACAELGSL------------SKGKEIEEYIVLN------------------ 361
+ L +C E + + G ++E +VL+
Sbjct: 253 DLVSWSALISCYEQNEMYEEALILFKEMNANGIMVDEVVVLSVLSACSRLLVVITGKLVH 312
Query: 362 ------GLESNRQVQTSLIHMFS-------------------------------KCGRIN 384
G+E+ +Q +LIHM+S KCG I
Sbjct: 313 GLVVKVGIETYVNLQNALIHMYSSCEEVVTAQKLFSESCCLDQISWNSMISGYVKCGEIE 372
Query: 385 KAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSAC 444
KA+ +F+ +PDKD WSAMI+GYA + L LF +MQ +EG KPD + S++SAC
Sbjct: 373 KARALFDSMPDKDNVSWSAMISGYAQQDRFTETLVLFQEMQ-IEGTKPDETILVSVISAC 431
Query: 445 SH-----------------------------------SGMVDDGLSFFKSMQSNFGIEPS 469
+H G V+D L FK ++ E
Sbjct: 432 THLAALDQGKWIHAYIRKNGLKINIILGTTLINMYMKLGCVEDALEVFKGLE-----EKG 486
Query: 470 IEHYLCLVDLLGRAGRFDLALKTIHEM------PVEVQAQVWAPLLSACMKHHNVELGEY 523
+ + L+ L G D +LKT EM P E+ + +L AC V+ G
Sbjct: 487 VSTWNALILGLAMNGLVDKSLKTFSEMKEHGVTPNEI---TFVAVLGACRHMGLVDEGHR 543
Query: 524 AAKNLL---TLNPGSTGNYILMANLFTSAGMWKEA 555
+++ + P + +Y M +L AGM KEA
Sbjct: 544 HFNSMIQEHKIGP-NIKHYGCMVDLLGRAGMLKEA 577
>gi|297817672|ref|XP_002876719.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297322557|gb|EFH52978.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 1005
Score = 338 bits (868), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 205/626 (32%), Positives = 335/626 (53%), Gaps = 10/626 (1%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
++ + + +G ETL + M TG NS+T L AC + GK +H+ VLK
Sbjct: 235 ILSSYSTSGKSLETLQLFREMQMTGPASNSYTIVSALTACEGFSYAKLGKEIHAAVLKST 294
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+ +V LI MY++C + + ++L M VV+WNS+I + + + EA+
Sbjct: 295 HSFEVYVCNALIAMYARCGKMLEAGRILRLM--NNADVVTWNSLIKGYVQNLMYKEALQF 352
Query: 121 LKEMWVLGLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
+M G + + SV++ + G+ +H V K G +N + + N+++ MY+
Sbjct: 353 FCDMIAAGHKPDEVSLTSVIAASGRLSNLLAGMELHAYVIKHGWDSN-LLVGNTLIDMYS 411
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K F + E ++SWTTII GY EA L + + + D ++ +
Sbjct: 412 KCNLTCYMGRAFLMMHEKDLISWTTIIAGYALNDCHVEALQLFRDVAKKRMEIDEMMLGS 471
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
++ C+ + ++ + +H +L+ G + + N LV +Y KC ++ A RVF+++ K
Sbjct: 472 ILRACSVLKSMLIVKEIHCHILRKGLI-DTVIQNELVDVYGKCRNMGYASRVFESIKGKD 530
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEE 356
V WTSMI A G +EAV LF+R+ +T + + L LSA A L +L KG+EI
Sbjct: 531 VVSWTSMISSSALNGNENEAVELFRRMAETGLLADSVALLCILSAAASLSALKKGREIHG 590
Query: 357 YIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQ 416
Y++ G + +++ M++ CG + AK VF+R+ K L +++MIN Y +HG G
Sbjct: 591 YLLRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKA 650
Query: 417 ALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCL 476
++ LF KM+H E + PD + + ++L ACSH+G++D+G F K M+ + +EP EHY+CL
Sbjct: 651 SVELFNKMRH-ENVSPDHISFLALLYACSHAGLLDEGRRFLKIMELEYKLEPWPEHYVCL 709
Query: 477 VDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGST 536
VD+LGRA A + + M E +VW LL+AC H E+GE AA+ LL L P +
Sbjct: 710 VDMLGRANCVVEAFEFVKMMKTEPTTEVWCALLAACRSHSEKEIGEIAAQRLLELEPKNP 769
Query: 537 GNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSV 596
GN +L++N+F G W + R M + K PG S +E+DG V F A D+SH +
Sbjct: 770 GNLVLVSNVFAEQGRWNDVEKVRAKMKASGMEKHPGCSWIEMDGKVHKFTARDKSHPETK 829
Query: 597 DIRKTLKELHIKL-LEAGYIAEADIV 621
+I + L E+ KL E+GY+A+ +
Sbjct: 830 EIYEKLSEVTRKLERESGYLADTKFI 855
Score = 211 bits (537), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 148/497 (29%), Positives = 250/497 (50%), Gaps = 14/497 (2%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+I +NG L Y +M GV + ++FP++LKAC + I G +H ++K+G
Sbjct: 133 LIGAYVSNGEPASALFIYRNMRVEGVPLDLYSFPVLLKACGKLRDIRSGTELHCMLVKLG 192
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F F+ L+ MY+K +D +S+ K L + V WNSI+S++S + + E + +
Sbjct: 193 FNSTGFIVNALVSMYAK-TDHLSAAKRLFDASQEKGDAVLWNSILSSYSTSGKSLETLQL 251
Query: 121 LKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
+EM + G ++ T VS ++ C + G +H V K + E+ + N++++MYA
Sbjct: 252 FREMQMTGPASNSYTIVSALTACEGFSYAKLGKEIHAAVLK-STHSFEVYVCNALIAMYA 310
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
+ GK+ EA I + +V+W ++I GYV EA M PD V +
Sbjct: 311 RCGKMLEAGRILRLMNNADVVTWNSLIKGYVQNLMYKEALQFFCDMIAAGHKPDEVSLTS 370
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
+I ++ NL + +H+ ++K G+++ + N L+ MY+KC R F + EK
Sbjct: 371 VIAASGRLSNLLAGMELHAYVIKHGWDSNLLVGNTLIDMYSKCNLTCYMGRAFLMMHEKD 430
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEE 356
+ WT++I GYA EA+ LF+ + K + +E L + L AC+ L S+ KEI
Sbjct: 431 LISWTTIIAGYALNDCHVEALQLFRDVAKKRMEIDEMMLGSILRACSVLKSMLIVKEIHC 490
Query: 357 YIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQ 416
+I+ GL + +Q L+ ++ KC + A VFE + KD+ W++MI+ A++G ++
Sbjct: 491 HILRKGL-IDTVIQNELVDVYGKCRNMGYASRVFESIKGKDVVSWTSMISSSALNGNENE 549
Query: 417 ALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKS-MQSNFGIEPSI----- 470
A+ LF +M GL D+V ILSA + + G ++ F +E SI
Sbjct: 550 AVELFRRMAET-GLLADSVALLCILSAAASLSALKKGREIHGYLLRKGFCLEGSIAVAVV 608
Query: 471 EHYLCLVDLLGRAGRFD 487
+ Y C DL FD
Sbjct: 609 DMYACCGDLQSAKAVFD 625
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 110/372 (29%), Positives = 185/372 (49%), Gaps = 9/372 (2%)
Query: 79 SDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVS 138
S +S KV DEM R R+ +WN++I A+ A+ + + M V G+ L +F
Sbjct: 110 SRALSQEKVFDEM--RDRTAFAWNALIGAYVSNGEPASALFIYRNMRVEGVPLDLYSFPV 167
Query: 139 VVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGET 194
++ C R G +HC + KLG N+ + N+++SMYAK ++ A+ +FD E
Sbjct: 168 LLKACGKLRDIRSGTELHCMLVKLGF-NSTGFIVNALVSMYAKTDHLSAAKRLFDASQEK 226
Query: 195 -SIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSM 253
V W +I+ Y G E L +M+ + ++ + C L +
Sbjct: 227 GDAVLWNSILSSYSTSGKSLETLQLFREMQMTGPASNSYTIVSALTACEGFSYAKLGKEI 286
Query: 254 HSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYP 313
H+ +LKS ++ E + N L++MY +CG + A R+ + V W S+I GY Q
Sbjct: 287 HAAVLKSTHSFEVYVCNALIAMYARCGKMLEAGRILRLMNNADVVTWNSLIKGYVQNLMY 346
Query: 314 SEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSL 373
EA+ F ++ +P+E +L + ++A L +L G E+ Y++ +G +SN V +L
Sbjct: 347 KEALQFFCDMIAAGHKPDEVSLTSVIAASGRLSNLLAGMELHAYVIKHGWDSNLLVGNTL 406
Query: 374 IHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPD 433
I M+SKC F + +KDL W+ +I GYA++ +AL LF + + ++ D
Sbjct: 407 IDMYSKCNLTCYMGRAFLMMHEKDLISWTTIIAGYALNDCHVEALQLFRDVAK-KRMEID 465
Query: 434 AVVYTSILSACS 445
++ SIL ACS
Sbjct: 466 EMMLGSILRACS 477
>gi|297596789|ref|NP_001043072.2| Os01g0374200 [Oryza sativa Japonica Group]
gi|255673241|dbj|BAF04986.2| Os01g0374200 [Oryza sativa Japonica Group]
Length = 629
Score = 338 bits (868), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 184/556 (33%), Positives = 312/556 (56%), Gaps = 9/556 (1%)
Query: 64 DAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAI----L 119
+ +V T L++MY K +R+V D MP R+ SW+++++ ++ ++EA L
Sbjct: 46 NVYVCTSLLNMYCKLGIVSDARRVFDGMP--QRNSFSWSTMVAGYAAEKCSEEAFDLFRL 103
Query: 120 VLKEMWVLGLELSASTFVSVVS-GCSFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKF 178
+L+E E A+ +S VS G MH + K GLL+ + + NS+++MYAK
Sbjct: 104 MLEECPSEKSEFVATAVLSAVSVPLGLLMGEQMHGLIVKDGLLDF-VSVENSLVTMYAKA 162
Query: 179 GKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLI 238
G + A +F+ E + ++W+ +I GY G + A + +QM TP F+ ++
Sbjct: 163 GCMGAAFHVFESSRERNSITWSAMITGYAQNGEADSAVSMFSQMHAAGFTPTEFTFVGVL 222
Query: 239 LGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVF 298
+ +G L + H L++K G+ + + + LV MY KCG + A+ FD + E +
Sbjct: 223 NASSDLGALAVGKQAHGLMVKLGFEVQIYVKSALVDMYAKCGCIADAKEGFDQLYEVDIV 282
Query: 299 LWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYI 358
LWT+M+ G+ Q G EA+ L+ R+ K + P+++T+A+ L ACA + +L GK++ I
Sbjct: 283 LWTAMVSGHVQNGEHEEALTLYARMDKEGIIPSKSTIASGLRACAGIAALEPGKQLHTQI 342
Query: 359 VLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQAL 418
V GL V ++L M+SKCG + VF R+PD+D+ W+++I+G++ +G G+ AL
Sbjct: 343 VKYGLGLGAPVGSALSTMYSKCGNLEDGMSVFRRIPDRDVIAWNSIISGFSQNGCGNGAL 402
Query: 419 NLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVD 478
+LF +M+ +EG PD + + +IL ACSH G+VD G +F M ++G+ P ++HY C+VD
Sbjct: 403 DLFEEMK-MEGTIPDNITFINILCACSHMGLVDRGWEYFSLMTKDYGLTPRLDHYACMVD 461
Query: 479 LLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGN 538
+L RAG A I + ++ +W +L AC + ++G YA + L+ L G +
Sbjct: 462 ILSRAGMLKEAKDFIESITIDHGTCLWRIVLGACRSLRDFDVGAYAGERLMELGTGDSSA 521
Query: 539 YILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDI 598
YIL++N++ S W + R LM R + K+PG S VE++ V VFV G++ H + +I
Sbjct: 522 YILLSNIYASQRKWNDVERVRHLMRLRGVNKDPGCSWVELNSRVHVFVVGEQQHPEAENI 581
Query: 599 RKTLKELHIKLLEAGY 614
L+ L + + GY
Sbjct: 582 NAQLRRLAKHMKDEGY 597
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 82/312 (26%), Positives = 158/312 (50%), Gaps = 11/312 (3%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI NG + +S +S M G FTF VL A +++ ++ GK+ H ++K+G
Sbjct: 186 MITGYAQNGEADSAVSMFSQMHAAGFTPTEFTFVGVLNASSDLGALAVGKQAHGLMVKLG 245
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F+ +V++ L+DMY+KC +++ D++ +V W +++S H + ++EA+ +
Sbjct: 246 FEVQIYVKSALVDMYAKCGCIADAKEGFDQL--YEVDIVLWTAMVSGHVQNGEHEEALTL 303
Query: 121 LKEMWVLGLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
M G+ S ST S + C + G +H + K G L P+ +++ +MY+
Sbjct: 304 YARMDKEGIIPSKSTIASGLRACAGIAALEPGKQLHTQIVKYG-LGLGAPVGSALSTMYS 362
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K G + + S+F I + +++W +II G+ G N A L +M+ PD + F+N
Sbjct: 363 KCGNLEDGMSVFRRIPDRDVIAWNSIISGFSQNGCGNGALDLFEEMKMEGTIPDNITFIN 422
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNL--LVSMYTKCGDLELARRVFDAV-L 293
++ C+ +G + SL+ K Y LD+ +V + ++ G L+ A+ +++ +
Sbjct: 423 ILCACSHMGLVDRGWEYFSLMTKD-YGLTPRLDHYACMVDILSRAGMLKEAKDFIESITI 481
Query: 294 EKSVFLWTSMIG 305
+ LW ++G
Sbjct: 482 DHGTCLWRIVLG 493
>gi|225438700|ref|XP_002277701.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
mitochondrial [Vitis vinifera]
Length = 1008
Score = 338 bits (868), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 189/581 (32%), Positives = 312/581 (53%), Gaps = 12/581 (2%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI +NG +E ++ + M G ++ + +L AC+ + +I GK H+ +
Sbjct: 429 MISGYGHNGLWEASMDAFCDMQFEGFDPDAISIVNILSACSKLEAILLGKAAHAFSFRKE 488
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F + + L+ YS C SS K+ +MP LR+ +SWN++IS +A+ +
Sbjct: 489 FDSNLNISNALLAFYSDCGKLSSSFKLFQKMP--LRNAISWNTLISGCVHNGDTKKAVAL 546
Query: 121 LKEMWVLGLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
L +M +EL T +S++ C + QG+++H K G ++ L N+++SMY
Sbjct: 547 LHKMQQEKMELDLVTLISIIPICRVAENLIQGMTLHGYAIKTGF-ACDVSLVNALISMYF 605
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
G +N + +F+ + SIVSW +I GY NE QM R P+ V LN
Sbjct: 606 NCGDINAGKFLFEVMPWRSIVSWNALITGYRFHYLQNEVMASFCQMIREGQKPNYVTLLN 665
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
L+ C L S+H+ +++G E P+ L+SMY + ++ +F+ ++
Sbjct: 666 LLPSCR---TLLQGKSIHAFAVRTGVIVETPIITSLISMYARFENINSFIFLFEMGGKED 722
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEE 356
+ LW +++ Y Q E+V F LL V P+ T + +SAC +L SL+ +
Sbjct: 723 IALWNAIMSVYVQTKNAKESVTFFCELLHARVEPDYITFLSLISACVQLSSLNLSNSVMA 782
Query: 357 YIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQ 416
Y++ G + + + +LI +F++CG I+ AK++FE + KD WS MINGY +HG +
Sbjct: 783 YVIQKGFDKHIVISNALIDLFARCGNISIAKKIFEGLSSKDAVSWSTMINGYGLHGDSEA 842
Query: 417 ALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCL 476
AL L +M+ + G+KPD + Y S+LSACSH G +D G F SM G+ +EHY C+
Sbjct: 843 ALALLSQMR-LSGMKPDGITYASVLSACSHGGFIDQGWMIFNSMVEE-GVPRRMEHYACM 900
Query: 477 VDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGST 536
VDLLGR G+ + A + ++P + + LL AC+ H NV+LGE + L L+P ++
Sbjct: 901 VDLLGRTGQLNEAYDFVEKLPCKPSVSLLESLLGACIIHGNVKLGEKISSLLFELDPKNS 960
Query: 537 GNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVE 577
G+Y+++ N++ +AG W +A R M++R+L K PG+S VE
Sbjct: 961 GSYVMLYNIYAAAGRWMDANRVRSDMEERQLRKIPGFSLVE 1001
Score = 244 bits (623), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 153/553 (27%), Positives = 285/553 (51%), Gaps = 14/553 (2%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MIR ++G FE+ L Y G + FTFP V+KAC + ++W + VH VL+
Sbjct: 126 MIRRLCDHGLFEDVLCVYLKCRVLGCPSDDFTFPFVIKACTALGAVWIAEGVHCIVLRTS 185
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F+++ +QT L+D Y+K V +R VLD+ + +V+WN++IS +S + E V
Sbjct: 186 FEENLVIQTALVDFYAKTGRMVKARLVLDK--ISQPDLVTWNALISGYSLNGFDKEVFEV 243
Query: 121 LKEMWVLGLELSASTFVSVVSGCSFRQ----GISMHCCVYKLGLLNNEIPLANSVMSMYA 176
L+++ +GL+ + STF S++ C+ + G S+H V K G ++E L +++SMYA
Sbjct: 244 LRQINEMGLKPNVSTFASIIPLCTRMKCLDIGKSIHGFVVKSGFSSDEF-LTPALISMYA 302
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
G + AR +FD E ++V W ++I Y +EAF + QM + ++ P++V F++
Sbjct: 303 GGGNLFIARDLFDSAAEKNVVIWNSMISAYAQNQKSSEAFKMFQQMLKANMQPNVVTFVS 362
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
+I C N + S+H+ ++K +++ + L+SMY K GDL A +F + ++
Sbjct: 363 IIPCCENSANFWYGKSLHAHVMKYRLDSQLSVATALLSMYAKLGDLNSADFIFYQMPRRN 422
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEE 356
+ W SMI GY G +++ F + P+ ++ LSAC++L ++ GK
Sbjct: 423 LLSWNSMISGYGHNGLWEASMDAFCDMQFEGFDPDAISIVNILSACSKLEAILLGKAAHA 482
Query: 357 YIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQ 416
+ +SN + +L+ +S CG+++ + ++F+++P ++ W+ +I+G +G +
Sbjct: 483 FSFRKEFDSNLNISNALLAFYSDCGKLSSSFKLFQKMPLRNAISWNTLISGCVHNGDTKK 542
Query: 417 ALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFF-KSMQSNFGIEPSIEHYLC 475
A+ L +KMQ E ++ D V SI+ C + + G++ ++++ F + S+ +
Sbjct: 543 AVALLHKMQQ-EKMELDLVTLISIIPICRVAENLIQGMTLHGYAIKTGFACDVSLVN--A 599
Query: 476 LVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGS 535
L+ + G + MP W L++ + H ++ E A + G
Sbjct: 600 LISMYFNCGDINAGKFLFEVMPWRSIVS-WNALITG-YRFHYLQ-NEVMASFCQMIREGQ 656
Query: 536 TGNYILMANLFTS 548
NY+ + NL S
Sbjct: 657 KPNYVTLLNLLPS 669
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 76/338 (22%), Positives = 163/338 (48%), Gaps = 3/338 (0%)
Query: 160 LLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLC 219
L+ +E +A ++S + G A S F+ I + S+ +I + G + +
Sbjct: 85 LMRDEYVVAEFIISCF-HLGAPELALSAFEAIEKPSVFLQNLMIRRLCDHGLFEDVLCVY 143
Query: 220 NQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKC 279
+ R + D F +I C +G +++A +H ++L++ + + LV Y K
Sbjct: 144 LKCRVLGCPSDDFTFPFVIKACTALGAVWIAEGVHCIVLRTSFEENLVIQTALVDFYAKT 203
Query: 280 GDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTL 339
G + AR V D + + + W ++I GY+ G+ E + +++ + ++PN +T A+ +
Sbjct: 204 GRMVKARLVLDKISQPDLVTWNALISGYSLNGFDKEVFEVLRQINEMGLKPNVSTFASII 263
Query: 340 SACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLA 399
C + L GK I ++V +G S+ + +LI M++ G + A+++F+ +K++
Sbjct: 264 PLCTRMKCLDIGKSIHGFVVKSGFSSDEFLTPALISMYAGGGNLFIARDLFDSAAEKNVV 323
Query: 400 VWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKS 459
+W++MI+ YA + +A +F +M ++P+ V + SI+ C +S G S
Sbjct: 324 IWNSMISAYAQNQKSSEAFKMFQQMLKA-NMQPNVVTFVSIIPCCENSANFWYGKSLHAH 382
Query: 460 MQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMP 497
+ + ++ + L+ + + G + A ++MP
Sbjct: 383 VM-KYRLDSQLSVATALLSMYAKLGDLNSADFIFYQMP 419
>gi|224108621|ref|XP_002314911.1| predicted protein [Populus trichocarpa]
gi|222863951|gb|EEF01082.1| predicted protein [Populus trichocarpa]
Length = 743
Score = 338 bits (868), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 206/652 (31%), Positives = 338/652 (51%), Gaps = 73/652 (11%)
Query: 38 KACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMP----- 92
K C + K++H ++K + F+ LI+ YSK + +R V D+MP
Sbjct: 13 KLCCETRNQTQAKKLHCLIIKSLTNPETFLYNNLINAYSKLGNITYARHVFDKMPQPNSF 72
Query: 93 ------------------------VRLRSVVSWNSIISAHSRACLND--EAILVLKEMWV 126
+ R VSWNS+IS + C EA+ M
Sbjct: 73 SWNTMLSAYSKSGDLSTMQEIFSIMPNRDGVSWNSLISGY--VCYGSVVEAVKTYNSMMK 130
Query: 127 LGL----ELSASTFVSVVS--GCSFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGK 180
G+ ++ ST + +VS GC G +H + K G + + +S++ MYAK G
Sbjct: 131 DGVLNLNRITFSTMLLLVSSQGC-VDLGRQIHGQIVKFGF-GAYVFVGSSLVDMYAKMGL 188
Query: 181 VNEARSIFDEIGETSIV-------------------------------SWTTIIGGYVNV 209
V+ A +FDE+ E ++V SWTT+I G +
Sbjct: 189 VSVASQVFDEVQERNVVMYNTMITGLLRSGMVKDSKRLFHGMKERDSISWTTMITGLIQN 248
Query: 210 GNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLD 269
G EA L MR+ + D F +++ C + L +H+L+++SGYN+ +
Sbjct: 249 GLEAEAMDLFRDMRQEGMAMDQYTFGSVLTACGGLRALKEGKEIHTLIIRSGYNHNVFVG 308
Query: 270 NLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVR 329
+ LV MY KC + A VF + K+V WT+M+ GY Q G+ EAV +F + + +
Sbjct: 309 SALVDMYCKCRSVRYAEAVFKRMANKNVVSWTAMLVGYGQNGFSEEAVRVFCDMQRNGIE 368
Query: 330 PNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEV 389
P++ TL + +S+CA L SL +G + +++GL S V +LI ++ KCG I + ++
Sbjct: 369 PDDFTLGSVISSCANLASLEEGAQFHCQALVSGLISFITVSNALITLYGKCGSIEDSNQL 428
Query: 390 FERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGM 449
F+ + +D W+A+++GYA G ++ ++LF +M V+GLKPDAV + ++LSACS +G+
Sbjct: 429 FDEMSFRDEVSWTALVSGYAQFGKANETIDLFERML-VQGLKPDAVTFIAVLSACSRAGL 487
Query: 450 VDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLL 509
V+ G +F+SM + GI P +HY C++DL GRAGR + A I++MP + WA LL
Sbjct: 488 VERGQQYFESMLKDHGIIPFSDHYTCMIDLFGRAGRLEEAKNFINKMPFSPDSIGWATLL 547
Query: 510 SACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTK 569
S+C + N E+G++AA++LL L+P + YIL+++++ + G W A R M ++ K
Sbjct: 548 SSCRLYGNEEIGKWAAESLLELDPQNPAGYILLSSIYAAKGKWSNVAQLRRGMREKGARK 607
Query: 570 EPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKELHIKLLEAGYIAEADIV 621
EPG+S ++ V +F A D+S S I L++L+ K++E GY+ +A V
Sbjct: 608 EPGFSWIKYKSKVYIFSADDQSSPFSDQIYAELEKLNHKMIEEGYVPDASSV 659
Score = 185 bits (469), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 116/440 (26%), Positives = 219/440 (49%), Gaps = 37/440 (8%)
Query: 9 GSFEETLSTYSSMLQTGV-HGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFV 67
GS E + TY+SM++ GV + N TF +L ++ + G+++H ++K GF FV
Sbjct: 116 GSVVEAVKTYNSMMKDGVLNLNRITFSTMLLLVSSQGCVDLGRQIHGQIVKFGFGAYVFV 175
Query: 68 QTGLIDMYSKCSDFVSSRKVLDEMPVR-----------------------------LRSV 98
+ L+DMY+K + +V DE+ R R
Sbjct: 176 GSSLVDMYAKMGLVSVASQVFDEVQERNVVMYNTMITGLLRSGMVKDSKRLFHGMKERDS 235
Query: 99 VSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGC----SFRQGISMHCC 154
+SW ++I+ + L EA+ + ++M G+ + TF SV++ C + ++G +H
Sbjct: 236 ISWTTMITGLIQNGLEAEAMDLFRDMRQEGMAMDQYTFGSVLTACGGLRALKEGKEIHTL 295
Query: 155 VYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNE 214
+ + G N+ + + ++++ MY K V A ++F + ++VSWT ++ GY G E
Sbjct: 296 IIRSG-YNHNVFVGSALVDMYCKCRSVRYAEAVFKRMANKNVVSWTAMLVGYGQNGFSEE 354
Query: 215 AFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVS 274
A + M+R + PD ++I CA + +L H L SG + + N L++
Sbjct: 355 AVRVFCDMQRNGIEPDDFTLGSVISSCANLASLEEGAQFHCQALVSGLISFITVSNALIT 414
Query: 275 MYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEAT 334
+Y KCG +E + ++FD + + WT+++ GYAQ G +E ++LF+R+L ++P+ T
Sbjct: 415 LYGKCGSIEDSNQLFDEMSFRDEVSWTALVSGYAQFGKANETIDLFERMLVQGLKPDAVT 474
Query: 335 LATTLSACAELGSLSKGKE-IEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERV 393
LSAC+ G + +G++ E + +G+ T +I +F + GR+ +AK ++
Sbjct: 475 FIAVLSACSRAGLVERGQQYFESMLKDHGIIPFSDHYTCMIDLFGRAGRLEEAKNFINKM 534
Query: 394 P-DKDLAVWSAMINGYAIHG 412
P D W+ +++ ++G
Sbjct: 535 PFSPDSIGWATLLSSCRLYG 554
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 93/361 (25%), Positives = 165/361 (45%), Gaps = 50/361 (13%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI NG E + + M Q G+ + +TF VL AC + ++ +GK +H+ +++ G
Sbjct: 241 MITGLIQNGLEAEAMDLFRDMRQEGMAMDQYTFGSVLTACGGLRALKEGKEIHTLIIRSG 300
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+ + FV + L+DMY KC + V M ++VVSW +++ + + ++EA+ V
Sbjct: 301 YNHNVFVGSALVDMYCKCRSVRYAEAVFKRMAN--KNVVSWTAMLVGYGQNGFSEEAVRV 358
Query: 121 LKEMWVLGLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
+M G+E T SV+S C S +G HC GL++ I ++N+++++Y
Sbjct: 359 FCDMQRNGIEPDDFTLGSVISSCANLASLEEGAQFHCQALVSGLISF-ITVSNALITLYG 417
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K G + ++ +FDE+ VSWT ++ GY G NE L +M + PD V F+
Sbjct: 418 KCGSIEDSNQLFDEMSFRDEVSWTALVSGYAQFGKANETIDLFERMLVQGLKPDAVTFIA 477
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
++ C ++ G +E ++ F+++L+
Sbjct: 478 VLSAC-----------------------------------SRAGLVERGQQYFESMLKDH 502
Query: 297 VFL-----WTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKG 351
+ +T MI + + G EA N ++ P+ AT LS+C G+ G
Sbjct: 503 GIIPFSDHYTCMIDLFGRAGRLEEAKNFINKM---PFSPDSIGWATLLSSCRLYGNEEIG 559
Query: 352 K 352
K
Sbjct: 560 K 560
>gi|242092564|ref|XP_002436772.1| hypothetical protein SORBIDRAFT_10g008520 [Sorghum bicolor]
gi|241914995|gb|EER88139.1| hypothetical protein SORBIDRAFT_10g008520 [Sorghum bicolor]
Length = 825
Score = 338 bits (868), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 194/617 (31%), Positives = 329/617 (53%), Gaps = 8/617 (1%)
Query: 9 GSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQ 68
G FEE + + + G N F +LK +++ +H+ K+G ++AFV
Sbjct: 129 GGFEEAAGLFRRLQREGHEVNHFVLTTILKVLVAMDAPGLTCCIHACACKLGHDRNAFVG 188
Query: 69 TGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLG 128
+ LID YS C +R V D + + V+W +++S +S + ++A+ +M + G
Sbjct: 189 SSLIDAYSLCGAVSHARCVFDG--IIWKDAVTWTAMVSCYSENDIPEDALNTFSKMRMAG 246
Query: 129 LELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEA 184
+ + SV+ S G +H C K L + E + +++ MYAK G + +A
Sbjct: 247 AKPNPFVLTSVLKAAVCLSSAVLGKGIHGCAVKT-LCDTEPHVGGALLDMYAKCGYIEDA 305
Query: 185 RSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQV 244
R++F+ I ++ W+ +I Y +AF + +M R SV P+ ++ CA V
Sbjct: 306 RTVFEIIPHDDVILWSFLISRYAQSYQNEQAFEMFLRMMRSSVVPNEFSLSGVLQACANV 365
Query: 245 GNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMI 304
L L +H+L++K GY +E + N L+ +Y KC ++E + +F ++ + + W ++I
Sbjct: 366 AFLDLGQQIHNLVIKLGYESELFVGNALMDVYAKCRNMENSLEIFRSLRDANEVSWNTII 425
Query: 305 GGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLE 364
GY Q G+ +A+++F+ + V + T ++ L ACA S+ +I I +
Sbjct: 426 VGYCQSGFAEDALSVFQEMRAAHVLSTQVTFSSVLRACANTASIKHTVQIHSLIEKSTFN 485
Query: 365 SNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKM 424
++ V SLI ++KCG I A +VFE + D+ W+A+I+GYA+HG AL LF +M
Sbjct: 486 NDTIVCNSLIDTYAKCGCIRDALKVFESIIQCDVVSWNAIISGYALHGRATDALELFNRM 545
Query: 425 QHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAG 484
+ KP+ V + ++LS C +G+V+ GLS F SM + I+PS++HY C+V LLGRAG
Sbjct: 546 NKSD-TKPNDVTFVALLSVCGSTGLVNQGLSLFNSMTMDHRIKPSMDHYTCIVRLLGRAG 604
Query: 485 RFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMAN 544
R + ALK I ++P VW LLS+C+ H NV LG+++A+ +L + P Y+L++N
Sbjct: 605 RLNDALKFIGDIPSTPSPMVWRALLSSCVVHKNVALGKFSAEKVLEIEPQDETTYVLLSN 664
Query: 545 LFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKE 604
++ +AG+ + A R M + + KE G S VEI G V F G H I L+
Sbjct: 665 MYAAAGILDQVALLRKSMRNIGVKKEVGLSWVEIKGEVHAFSVGSADHPDMRIINAMLEW 724
Query: 605 LHIKLLEAGYIAEADIV 621
L++K GY+ + ++V
Sbjct: 725 LNLKASREGYVPDINVV 741
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 128/498 (25%), Positives = 242/498 (48%), Gaps = 22/498 (4%)
Query: 29 NSFTFPLVLKACANINSIWDGKRVHSHVLKVG--FQQDAFVQTGLIDMYSKCSDFVSSRK 86
+S+ +L+ C G+ VH+ V++ G Q D F L+++Y+K ++R+
Sbjct: 46 DSYACARLLQRCIARGDARAGRAVHARVVQRGGVAQLDTFCANVLLNLYAKLGPLAAARR 105
Query: 87 VLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCSFR 146
+ D MP R++VS+ +++ ++ +EA + + + G E++ +++
Sbjct: 106 LFDGMPE--RNMVSFVTLVQGYALRGGFEEAAGLFRRLQREGHEVNHFVLTTILKVLVAM 163
Query: 147 QGISMHCCVY----KLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTI 202
+ CC++ KLG N + +S++ Y+ G V+ AR +FD I V+WT +
Sbjct: 164 DAPGLTCCIHACACKLGHDRNAF-VGSSLIDAYSLCGAVSHARCVFDGIIWKDAVTWTAM 222
Query: 203 IGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGY 262
+ Y +A ++MR P+ V +++ + + L +H +K+
Sbjct: 223 VSCYSENDIPEDALNTFSKMRMAGAKPNPFVLTSVLKAAVCLSSAVLGKGIHGCAVKTLC 282
Query: 263 NNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKR 322
+ E + L+ MY KCG +E AR VF+ + V LW+ +I YAQ +A +F R
Sbjct: 283 DTEPHVGGALLDMYAKCGYIEDARTVFEIIPHDDVILWSFLISRYAQSYQNEQAFEMFLR 342
Query: 323 LLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGR 382
++++SV PNE +L+ L ACA + L G++I ++ G ES V +L+ +++KC
Sbjct: 343 MMRSSVVPNEFSLSGVLQACANVAFLDLGQQIHNLVIKLGYESELFVGNALMDVYAKCRN 402
Query: 383 INKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILS 442
+ + E+F + D + W+ +I GY G + AL++F +M+ L V ++S+L
Sbjct: 403 MENSLEIFRSLRDANEVSWNTIIVGYCQSGFAEDALSVFQEMRAAHVLSTQ-VTFSSVLR 461
Query: 443 ACSHSGMVDDGLSFFKSMQSNFGIEPSI---EHYLC--LVDLLGRAGRFDLALKTIHEMP 497
AC+++ S ++Q + IE S + +C L+D + G ALK + E
Sbjct: 462 ACANTA------SIKHTVQIHSLIEKSTFNNDTIVCNSLIDTYAKCGCIRDALK-VFESI 514
Query: 498 VEVQAQVWAPLLSACMKH 515
++ W ++S H
Sbjct: 515 IQCDVVSWNAIISGYALH 532
>gi|14587213|dbj|BAB61147.1| PPR-repeat protein-like [Oryza sativa Japonica Group]
gi|125570436|gb|EAZ11951.1| hypothetical protein OsJ_01824 [Oryza sativa Japonica Group]
Length = 735
Score = 338 bits (868), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 184/556 (33%), Positives = 312/556 (56%), Gaps = 9/556 (1%)
Query: 64 DAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAI----L 119
+ +V T L++MY K +R+V D MP R + SW+++++ ++ ++EA L
Sbjct: 152 NVYVCTSLLNMYCKLGIVSDARRVFDGMPQR--NSFSWSTMVAGYAAEKCSEEAFDLFRL 209
Query: 120 VLKEMWVLGLELSASTFVSVVS-GCSFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKF 178
+L+E E A+ +S VS G MH + K GLL+ + + NS+++MYAK
Sbjct: 210 MLEECPSEKSEFVATAVLSAVSVPLGLLMGEQMHGLIVKDGLLDF-VSVENSLVTMYAKA 268
Query: 179 GKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLI 238
G + A +F+ E + ++W+ +I GY G + A + +QM TP F+ ++
Sbjct: 269 GCMGAAFHVFESSRERNSITWSAMITGYAQNGEADSAVSMFSQMHAAGFTPTEFTFVGVL 328
Query: 239 LGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVF 298
+ +G L + H L++K G+ + + + LV MY KCG + A+ FD + E +
Sbjct: 329 NASSDLGALAVGKQAHGLMVKLGFEVQIYVKSALVDMYAKCGCIADAKEGFDQLYEVDIV 388
Query: 299 LWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYI 358
LWT+M+ G+ Q G EA+ L+ R+ K + P+++T+A+ L ACA + +L GK++ I
Sbjct: 389 LWTAMVSGHVQNGEHEEALTLYARMDKEGIIPSKSTIASGLRACAGIAALEPGKQLHTQI 448
Query: 359 VLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQAL 418
V GL V ++L M+SKCG + VF R+PD+D+ W+++I+G++ +G G+ AL
Sbjct: 449 VKYGLGLGAPVGSALSTMYSKCGNLEDGMSVFRRIPDRDVIAWNSIISGFSQNGCGNGAL 508
Query: 419 NLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVD 478
+LF +M+ +EG PD + + +IL ACSH G+VD G +F M ++G+ P ++HY C+VD
Sbjct: 509 DLFEEMK-MEGTIPDNITFINILCACSHMGLVDRGWEYFSLMTKDYGLTPRLDHYACMVD 567
Query: 479 LLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGN 538
+L RAG A I + ++ +W +L AC + ++G YA + L+ L G +
Sbjct: 568 ILSRAGMLKEAKDFIESITIDHGTCLWRIVLGACRSLRDFDVGAYAGERLMELGTGDSSA 627
Query: 539 YILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDI 598
YIL++N++ S W + R LM R + K+PG S VE++ V VFV G++ H + +I
Sbjct: 628 YILLSNIYASQRKWNDVERVRHLMRLRGVNKDPGCSWVELNSRVHVFVVGEQQHPEAENI 687
Query: 599 RKTLKELHIKLLEAGY 614
L+ L + + GY
Sbjct: 688 NAQLRRLAKHMKDEGY 703
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 156/565 (27%), Positives = 260/565 (46%), Gaps = 75/565 (13%)
Query: 49 GKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSD--FVSSRKVLDEMPVRLRSVVSWNSIIS 106
G+ +H+ LK G A V LI+ YS ++ V D++P R V SWNS+++
Sbjct: 31 GEALHAWALKSGAASHAPVANSLINFYSSLPRPLLAAAFAVFDDIPPAARDVTSWNSLLN 90
Query: 107 AHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCSF-------------RQGISMHC 153
S D A+ + M LS+ST + S SF G + H
Sbjct: 91 PLSGHRPLD-ALSRFRSM------LSSSTVLP--SPHSFAAAFTAAARAASAPAGTAAHA 141
Query: 154 CVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVN 213
K+ + + + S+++MY K G V++AR +FD + + + SW+T++ GY
Sbjct: 142 LACKIPSAVSNVYVCTSLLNMYCKLGIVSDARRVFDGMPQRNSFSWSTMVAGYAAEKCSE 201
Query: 214 EAFGLCNQMRRMSVTPDLVVFLNLILGCAQVG-NLFLALSMHSLLLKSGYNNEDPLDNLL 272
EAF L M + +L V L + MH L++K G + ++N L
Sbjct: 202 EAFDLFRLMLEECPSEKSEFVATAVLSAVSVPLGLLMGEQMHGLIVKDGLLDFVSVENSL 261
Query: 273 VSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNE 332
V+MY K G + A VF++ E++ W++MI GYAQ G AV++F ++ P E
Sbjct: 262 VTMYAKAGCMGAAFHVFESSRERNSITWSAMITGYAQNGEADSAVSMFSQMHAAGFTPTE 321
Query: 333 ATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFER 392
T L+A ++LG+L+ GK+ +V G E V+++L+ M++KCG I AKE F++
Sbjct: 322 FTFVGVLNASSDLGALAVGKQAHGLMVKLGFEVQIYVKSALVDMYAKCGCIADAKEGFDQ 381
Query: 393 VPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSAC-------- 444
+ + D+ +W+AM++G+ +G ++AL L+ +M EG+ P S L AC
Sbjct: 382 LYEVDIVLWTAMVSGHVQNGEHEEALTLYARMDK-EGIIPSKSTIASGLRACAGIAALEP 440
Query: 445 ---------------------------SHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLV 477
S G ++DG+S F+ + + + + ++
Sbjct: 441 GKQLHTQIVKYGLGLGAPVGSALSTMYSKCGNLEDGMSVFRRIP-----DRDVIAWNSII 495
Query: 478 DLLGRAGRFDLALKTIHEMPVEVQAQ---VWAPLLSACMKHHNVELG-EYAAKNLLTLNP 533
+ G + AL EM +E + +L AC V+ G EY + L+T +
Sbjct: 496 SGFSQNGCGNGALDLFEEMKMEGTIPDNITFINILCACSHMGLVDRGWEYFS--LMTKDY 553
Query: 534 GST---GNYILMANLFTSAGMWKEA 555
G T +Y M ++ + AGM KEA
Sbjct: 554 GLTPRLDHYACMVDILSRAGMLKEA 578
Score = 132 bits (331), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 82/313 (26%), Positives = 158/313 (50%), Gaps = 11/313 (3%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI NG + +S +S M G FTF VL A +++ ++ GK+ H ++K+G
Sbjct: 292 MITGYAQNGEADSAVSMFSQMHAAGFTPTEFTFVGVLNASSDLGALAVGKQAHGLMVKLG 351
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F+ +V++ L+DMY+KC +++ D++ +V W +++S H + ++EA+ +
Sbjct: 352 FEVQIYVKSALVDMYAKCGCIADAKEGFDQL--YEVDIVLWTAMVSGHVQNGEHEEALTL 409
Query: 121 LKEMWVLGLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
M G+ S ST S + C + G +H + K G L P+ +++ +MY+
Sbjct: 410 YARMDKEGIIPSKSTIASGLRACAGIAALEPGKQLHTQIVKYG-LGLGAPVGSALSTMYS 468
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K G + + S+F I + +++W +II G+ G N A L +M+ PD + F+N
Sbjct: 469 KCGNLEDGMSVFRRIPDRDVIAWNSIISGFSQNGCGNGALDLFEEMKMEGTIPDNITFIN 528
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNL--LVSMYTKCGDLELARRVFDAV-L 293
++ C+ +G + SL+ K Y LD+ +V + ++ G L+ A+ +++ +
Sbjct: 529 ILCACSHMGLVDRGWEYFSLMTKD-YGLTPRLDHYACMVDILSRAGMLKEAKDFIESITI 587
Query: 294 EKSVFLWTSMIGG 306
+ LW ++G
Sbjct: 588 DHGTCLWRIVLGA 600
>gi|359483750|ref|XP_002269533.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g20770-like [Vitis vinifera]
Length = 847
Score = 338 bits (868), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 191/603 (31%), Positives = 314/603 (52%), Gaps = 49/603 (8%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACAN--------------INSI 46
M+ ++ E + ML+ +H +S + VL C+ ++S
Sbjct: 209 MMGGLADSDQVNEAFRLFRLMLRNRIHVDSVSLSSVLGVCSRGGCGEFGLHDSNDVLSSD 268
Query: 47 WDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIIS 106
G++VH +K GF+ D + L+DMY+K + S+ + MP SVVSWN +I+
Sbjct: 269 VHGQQVHCLTIKHGFESDLHLNNSLLDMYAKNGNMDSAEMIFVNMPEV--SVVSWNVMIA 326
Query: 107 AHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGLLNNEIP 166
+ + + +AI L+ M G E T+V+++ C
Sbjct: 327 GYGQKSQSSKAIEYLQRMQYHGFEPDEITYVNMLVAC----------------------- 363
Query: 167 LANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMS 226
K G + R +FD + S+ SW TI+ GY N EA L +M+ S
Sbjct: 364 ---------IKSGDIEAGRQMFDGMSSPSLSSWNTILSGYSQNENHKEAVKLFREMQFRS 414
Query: 227 VTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELAR 286
V PD ++ A + L +H++ K+ + + L + L+ MY+KCG +E+A+
Sbjct: 415 VHPDRTTLAIILSSLAGMMLLEGGRQVHAVSQKAVFRTDIYLASGLIGMYSKCGKVEMAK 474
Query: 287 RVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELG 346
R+FD + E + W SM+ G + EA FK++ + + P++ + AT LS CA+L
Sbjct: 475 RIFDRIAELDIVCWNSMMAGLSLNSLDKEAFTFFKKMREKGMFPSQFSYATVLSCCAKLS 534
Query: 347 SLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMIN 406
SLS+G+++ I G ++ V ++LI M+SKCG ++ A+ VF+ + K+ W+ MI+
Sbjct: 535 SLSQGRQVHSQIAREGYMNDAFVGSALIDMYSKCGDVDAARWVFDMMLGKNTVTWNEMIH 594
Query: 407 GYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGI 466
GYA +G GD+A+ L Y+ G KPD + + ++L+ACSHSG+VD G+ F SMQ G+
Sbjct: 595 GYAQNGCGDEAV-LLYEDMIGSGEKPDGITFVAVLTACSHSGLVDTGIKIFNSMQQEHGV 653
Query: 467 EPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAK 526
EP ++HY C++D LGRAGR A I +MP + +W LLS+C + +V L AA+
Sbjct: 654 EPLVDHYTCIIDSLGRAGRLHEAEVLIDKMPCKYDPIIWEVLLSSCRVYADVSLARRAAE 713
Query: 527 NLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFV 586
L L+P ++ Y+L+AN+++S G W +A R LM ++ K+PG+S +E +Q F+
Sbjct: 714 ELFHLDPQNSAPYVLLANIYSSLGRWDDAKAVRELMSYNQVVKDPGYSWIEHKNGMQAFM 773
Query: 587 AGD 589
D
Sbjct: 774 VDD 776
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 147/590 (24%), Positives = 254/590 (43%), Gaps = 123/590 (20%)
Query: 36 VLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVR- 94
+L+ C + + GK +H+H+L+ D F+ LI+ Y+KC+ +SR++ D+MP R
Sbjct: 11 LLQTCIDKKAHLAGKLIHAHMLRSRLSDDTFLSNRLIEFYAKCNAIDASRRLFDQMPKRD 70
Query: 95 ----------------------------LRSVVSWNSIISAHSRACLNDEAILVLKEMWV 126
R++VSWN++ISA +R +A+ V M
Sbjct: 71 IYTWNAILGAYCKASELEDAHVLFAEMPERNIVSWNTLISALTRNGFEQKALGVYYRMSR 130
Query: 127 LGLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVN 182
G + T SV+S C G H K+GL NN I + N+++ MYAK +
Sbjct: 131 EGFVPTHFTLASVLSACGALVDVECGRRCHGISIKIGLDNN-IYVGNALLGMYAKCRCIG 189
Query: 183 EARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCA 242
+A F ++ E + VS+T ++GG + VNEAF L M R + D V +++ C+
Sbjct: 190 DAIQAFGDVPEPNEVSFTAMMGGLADSDQVNEAFRLFRLMLRNRIHVDSVSLSSVLGVCS 249
Query: 243 QVGNLFLAL--------------SMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRV 288
+ G L +H L +K G+ ++ L+N L+ MY K G+++ A +
Sbjct: 250 RGGCGEFGLHDSNDVLSSDVHGQQVHCLTIKHGFESDLHLNNSLLDMYAKNGNMDSAEMI 309
Query: 289 FDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSL 348
F + E SV W MI GY Q S+A+ +R+ P+E T L AC + G +
Sbjct: 310 FVNMPEVSVVSWNVMIAGYGQKSQSSKAIEYLQRMQYHGFEPDEITYVNMLVACIKSGDI 369
Query: 349 SKGKEIEEYI----------VLNG------------------------------------ 362
G+++ + + +L+G
Sbjct: 370 EAGRQMFDGMSSPSLSSWNTILSGYSQNENHKEAVKLFREMQFRSVHPDRTTLAIILSSL 429
Query: 363 -----LESNRQVQ---------------TSLIHMFSKCGRINKAKEVFERVPDKDLAVWS 402
LE RQV + LI M+SKCG++ AK +F+R+ + D+ W+
Sbjct: 430 AGMMLLEGGRQVHAVSQKAVFRTDIYLASGLIGMYSKCGKVEMAKRIFDRIAELDIVCWN 489
Query: 403 AMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQS 462
+M+ G +++ + +A F KM+ +G+ P Y ++LS C+ + G + + S
Sbjct: 490 SMMAGLSLNSLDKEAFTFFKKMRE-KGMFPSQFSYATVLSCCAKLSSLSQG----RQVHS 544
Query: 463 NFGIEPSIEHYL---CLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLL 509
E + L+D+ + G D A + + +M + W ++
Sbjct: 545 QIAREGYMNDAFVGSALIDMYSKCGDVD-AARWVFDMMLGKNTVTWNEMI 593
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/141 (22%), Positives = 61/141 (43%), Gaps = 32/141 (22%)
Query: 335 LATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVP 394
LA+ L C + + GK I +++ + L + + LI ++KC I+ ++ +F+++P
Sbjct: 8 LASLLQTCIDKKAHLAGKLIHAHMLRSRLSDDTFLSNRLIEFYAKCNAIDASRRLFDQMP 67
Query: 395 DKDLAVWSAMINGYAI-------------------------------HGMGDQALNLFYK 423
+D+ W+A++ Y +G +AL ++Y+
Sbjct: 68 KRDIYTWNAILGAYCKASELEDAHVLFAEMPERNIVSWNTLISALTRNGFEQKALGVYYR 127
Query: 424 MQHVEGLKPDAVVYTSILSAC 444
M EG P S+LSAC
Sbjct: 128 MSR-EGFVPTHFTLASVLSAC 147
>gi|147819178|emb|CAN71462.1| hypothetical protein VITISV_018656 [Vitis vinifera]
Length = 787
Score = 338 bits (868), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 193/626 (30%), Positives = 329/626 (52%), Gaps = 37/626 (5%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+I+ + F E + + + + G N F F +LK +++ G +H+ + K+G
Sbjct: 110 LIQGYAESVRFLEAIELFVRLHREGHELNPFVFTTILKLLVSMDCGELGWGIHACIFKLG 169
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+ +AFV T LID YS C +R+V D + + +VSW +++ + EA+ +
Sbjct: 170 HESNAFVGTALIDAYSVCGRVDVAREVFD--GILYKDMVSWTGMVTCFAENDCFKEALKL 227
Query: 121 LKEMWVLGLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
+M ++G + + TF SV C +F G S+H C K ++ + +++ +Y
Sbjct: 228 FSQMRMVGFKPNNFTFASVFKACLGLEAFDVGKSVHGCALK-SRYELDLYVGVALLDLYT 286
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K G +++AR F+EI + ++ W+ +I Y EA + QMR+ V P+ F +
Sbjct: 287 KSGDIDDARXAFEEIPKKDVIPWSFMIARYAQSDQSKEAVEMFFQMRQALVLPNQFTFAS 346
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVF-DAVLEK 295
++ CA + L L +H ++K G +++ + N L+ +Y KCG +E + +F ++
Sbjct: 347 VLQACATMEGLNLGNQIHCHVIKIGLHSDVFVSNALMDVYAKCGRMENSMXLFAESPHRN 406
Query: 296 SVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIE 355
V W ++I G+ QLG +A+ LF +L+ V+ E T ++ L ACA L +L G +I
Sbjct: 407 DVTPWNTVIVGHVQLGDGEKALRLFLNMLEYRVQATEVTYSSALRACASLAALEPGLQIH 466
Query: 356 EYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGD 415
V + + V +LI M++KCG I A+ VF+ + +D W+AMI+GY++HG+
Sbjct: 467 SLTVKTTFDKDIVVTNALIDMYAKCGSIKDARLVFDLMNKQDEVSWNAMISGYSMHGL-- 524
Query: 416 QALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLC 475
AC+++G++D G ++F SM + GIEP IEHY C
Sbjct: 525 ---------------------------ACANAGLLDQGQAYFTSMIQDHGIEPCIEHYTC 557
Query: 476 LVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGS 535
+V LLGR G D A+K I E+P + VW LL AC+ H+++ELG +A+++L + P
Sbjct: 558 MVWLLGRGGHLDKAVKLIDEIPFQPSVMVWRALLGACVIHNDIELGRISAQHVLEMEPQD 617
Query: 536 TGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLS 595
++L++N++ +A W A+ R M + + KEPG S +E G+V F GD SH
Sbjct: 618 KATHVLLSNMYATAKRWDNVASVRKNMKRKGVKKEPGLSWIESQGTVHSFTVGDTSHPEV 677
Query: 596 VDIRKTLKELHIKLLEAGYIAEADIV 621
I L+ LH+K +AGYI ++V
Sbjct: 678 RVINGMLEWLHMKTKKAGYIPNYNVV 703
Score = 201 bits (511), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 135/461 (29%), Positives = 230/461 (49%), Gaps = 10/461 (2%)
Query: 29 NSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVL 88
NS + L+ C + GK +H +LK G D F L++MY K + K+
Sbjct: 37 NSHAYANALQDCIQKDEPSRGKGLHCEILKRGGCLDLFAWNILLNMYVKSDFLCDASKLF 96
Query: 89 DEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSV----VSGCS 144
DEMP R+ +S+ ++I ++ + EAI + + G EL+ F ++ VS
Sbjct: 97 DEMPE--RNTISFVTLIQGYAESVRFLEAIELFVRLHREGHELNPFVFTTILKLLVSMDC 154
Query: 145 FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIG 204
G +H C++KLG +N + +++ Y+ G+V+ AR +FD I +VSWT ++
Sbjct: 155 GELGWGIHACIFKLGHESNAF-VGTALIDAYSVCGRVDVAREVFDGILYKDMVSWTGMVT 213
Query: 205 GYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNN 264
+ EA L +QMR + P+ F ++ C + + S+H LKS Y
Sbjct: 214 CFAENDCFKEALKLFSQMRMVGFKPNNFTFASVFKACLGLEAFDVGKSVHGCALKSRYEL 273
Query: 265 EDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLL 324
+ + L+ +YTK GD++ AR F+ + +K V W+ MI YAQ EAV +F ++
Sbjct: 274 DLYVGVALLDLYTKSGDIDDARXAFEEIPKKDVIPWSFMIARYAQSDQSKEAVEMFFQMR 333
Query: 325 KTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRIN 384
+ V PN+ T A+ L ACA + L+ G +I +++ GL S+ V +L+ +++KCGR+
Sbjct: 334 QALVLPNQFTFASVLQACATMEGLNLGNQIHCHVIKIGLHSDVFVSNALMDVYAKCGRME 393
Query: 385 KAKEVFERVPDK-DLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSA 443
+ +F P + D+ W+ +I G+ G G++AL LF M ++ V Y+S L A
Sbjct: 394 NSMXLFAESPHRNDVTPWNTVIVGHVQLGDGEKALRLFLNMLEYR-VQATEVTYSSALRA 452
Query: 444 CSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAG 484
C+ ++ GL S+ + I L+D+ + G
Sbjct: 453 CASLAALEPGLQ-IHSLTVKTTFDKDIVVTNALIDMYAKCG 492
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 88/329 (26%), Positives = 154/329 (46%), Gaps = 13/329 (3%)
Query: 234 FLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVL 293
+ N + C Q +H +LK G + N+L++MY K L A ++FD +
Sbjct: 41 YANALQDCIQKDEPSRGKGLHCEILKRGGCLDLFAWNILLNMYVKSDFLCDASKLFDEMP 100
Query: 294 EKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKE 353
E++ + ++I GYA+ EA+ LF RL + N T L + G
Sbjct: 101 ERNTISFVTLIQGYAESVRFLEAIELFVRLHREGHELNPFVFTTILKLLVSMDCGELGWG 160
Query: 354 IEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGM 413
I I G ESN V T+LI +S CGR++ A+EVF+ + KD+ W+ M+ +A +
Sbjct: 161 IHACIFKLGHESNAFVGTALIDAYSVCGRVDVAREVFDGILYKDMVSWTGMVTCFAENDC 220
Query: 414 GDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFK-SMQSNFGIEPSIEH 472
+AL LF +M+ V G KP+ + S+ AC D G S +++S + ++ +
Sbjct: 221 FKEALKLFSQMRMV-GFKPNNFTFASVFKACLGLEAFDVGKSVHGCALKSRYELDLYVG- 278
Query: 473 YLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLN 532
+ L+DL ++G D A E+P + W+ +++ ++ + + A + +
Sbjct: 279 -VALLDLYTKSGDIDDARXAFEEIP-KKDVIPWSFMIA---RYAQSDQSKEAVEMFFQMR 333
Query: 533 PGSTGNYILMANLFTSAGMWKEAATARGL 561
+++ N FT A + + AT GL
Sbjct: 334 QA-----LVLPNQFTFASVLQACATMEGL 357
>gi|225428280|ref|XP_002279627.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g17210-like [Vitis vinifera]
Length = 742
Score = 338 bits (868), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 195/612 (31%), Positives = 333/612 (54%), Gaps = 10/612 (1%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI + G+ ++ L + N T L + AC ++ ++ +G ++H ++++ G
Sbjct: 121 MIHGHLSRGASDKGLWWFRQARVIAFEPNVSTLVLAIHACRSLGAMEEGLKMHGYIIRSG 180
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F VQ L+ MY+ +D + ++ DEM R V+SW+ +I + + A+ +
Sbjct: 181 FLDIPSVQNSLLSMYAD-NDMERAEELFDEMCER--DVISWSVMIGGYVQTGEAKMALQL 237
Query: 121 LKEMWV-LGLELSASTFVSVVSGCSFRQGISMHCCVYKLGL---LNNEIPLANSVMSMYA 176
EM +EL T VSV+ C+ ISM V+ + + L+ ++ + NS++ MY+
Sbjct: 238 FLEMTSNASIELDGITMVSVLKACANTGDISMGRSVHGVVICRGLDYDLFVGNSIIDMYS 297
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K A F+E+ + VSW +II G V +EA L M + D V +N
Sbjct: 298 KCDDHESAFKAFNEMPCRNTVSWNSIISGLVRTEKHSEALSLFYSMGKAGFRADEVTLVN 357
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
L+ C + F +HS++++ GY + + N L+ Y+KC +ELA ++FD + K
Sbjct: 358 LLQSCKYFVDPFQCKFIHSIVIRWGYELNEFVINSLIDAYSKCDLIELAWKLFDRLKTKD 417
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEE 356
W++MI G+ G P EA+ LF+ + + +PN T+ + L A + L + K
Sbjct: 418 TVSWSAMIAGFNHCGKPDEAIALFQEMNQAQEKPNGVTILSLLEAFSVSADLKRSKWAHG 477
Query: 357 YIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQ 416
+ GL + V T+++ M++KCG I +++ F+++P+K++ W AMI ++G+
Sbjct: 478 IAIRRGLAAEVAVGTAILDMYAKCGEIGLSRKAFDQIPEKNIVSWGAMIAACGMNGLARD 537
Query: 417 ALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCL 476
AL L +M+ + GLKP+ V S+LSACSH G+V++GLSFF++M + G+EP +EHY C+
Sbjct: 538 ALALLSEMK-LHGLKPNVVTTLSVLSACSHGGLVEEGLSFFENMVQDHGVEPGLEHYSCM 596
Query: 477 VDLLGRAGRFDLALKTIHEMPVEVQ--AQVWAPLLSACMKHHNVELGEYAAKNLLTLNPG 534
VD+L RAG+ + A+ I +MP ++ A +W LLSAC N LG AA +L L P
Sbjct: 597 VDMLSRAGKLNSAMNLIEKMPERMRDGAGLWGALLSACRSSGNSRLGAGAAFRVLELEPQ 656
Query: 535 STGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHL 594
S+ Y L ++++ ++G+W +AA R L+ R + G+S V ++ FVAGD SH
Sbjct: 657 SSAGYFLASSMYAASGLWADAARMRWLVKARGVRVVAGYSLVHVEDKAWRFVAGDESHPR 716
Query: 595 SVDIRKTLKELH 606
+ +I +++LH
Sbjct: 717 AGEIWGVVEQLH 728
Score = 220 bits (560), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 157/527 (29%), Positives = 263/527 (49%), Gaps = 32/527 (6%)
Query: 2 IRNSTNNGSFE--ETLSTYSSMLQTGVHGNSFTF-PLVLKACANINSIWDGKRVHSHVLK 58
I++STN ++ E S Y M + G T +LKAC+++ + GK +H+ +LK
Sbjct: 19 IKDSTNRKWWDSWEACSRYHQMKKAGAQLTDPTLVHSILKACSSL-PVRHGKSIHASLLK 77
Query: 59 VGFQQDAFVQTG--LIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDE 116
GF D+ TG ++D Y K S+ V D M R R VSWN +I H +D+
Sbjct: 78 QGF--DSLTSTGNSVLDFYMKTGALDSALFVFDSM--RSRDSVSWNIMIHGHLSRGASDK 133
Query: 117 AILVLKEMWVLGLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIP-LANSV 171
+ ++ V+ E + ST V + C + +G+ MH + + G L +IP + NS+
Sbjct: 134 GLWWFRQARVIAFEPNVSTLVLAIHACRSLGAMEEGLKMHGYIIRSGFL--DIPSVQNSL 191
Query: 172 MSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQM-RRMSVTPD 230
+SMYA + A +FDE+ E ++SW+ +IGGYV G A L +M S+ D
Sbjct: 192 LSMYAD-NDMERAEELFDEMCERDVISWSVMIGGYVQTGEAKMALQLFLEMTSNASIELD 250
Query: 231 LVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFD 290
+ ++++ CA G++ + S+H +++ G + + + N ++ MY+KC D E A + F+
Sbjct: 251 GITMVSVLKACANTGDISMGRSVHGVVICRGLDYDLFVGNSIIDMYSKCDDHESAFKAFN 310
Query: 291 AVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSK 350
+ ++ W S+I G + SEA++LF + K R +E TL L +C +
Sbjct: 311 EMPCRNTVSWNSIISGLVRTEKHSEALSLFYSMGKAGFRADEVTLVNLLQSCKYFVDPFQ 370
Query: 351 GKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAI 410
K I ++ G E N V SLI +SKC I A ++F+R+ KD WSAMI G+
Sbjct: 371 CKFIHSIVIRWGYELNEFVINSLIDAYSKCDLIELAWKLFDRLKTKDTVSWSAMIAGFNH 430
Query: 411 HGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVD-----DGLSFFKSMQSNFG 465
G D+A+ LF +M + KP+ V S+L A S S + G++ + + +
Sbjct: 431 CGKPDEAIALFQEMNQAQE-KPNGVTILSLLEAFSVSADLKRSKWAHGIAIRRGLAAEVA 489
Query: 466 IEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSAC 512
+ +I +D+ + G L+ K ++P E W +++AC
Sbjct: 490 VGTAI------LDMYAKCGEIGLSRKAFDQIP-EKNIVSWGAMIAAC 529
>gi|20146256|dbj|BAB89038.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|125571007|gb|EAZ12522.1| hypothetical protein OsJ_02419 [Oryza sativa Japonica Group]
Length = 1062
Score = 338 bits (867), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 201/607 (33%), Positives = 336/607 (55%), Gaps = 19/607 (3%)
Query: 29 NSFTFPLVLKACANINS----IWDGKRVHSHVLKVG-FQQDAFVQTGLIDMYSKCSDFVS 83
N T+ ++L A A ++ + G+ VH+HVL+ G + V GL++MY+KC
Sbjct: 377 NVDTYVVLLSAIAEFSTAEQGLRKGREVHAHVLRAGHIYRKIAVSNGLVNMYAKCGAIDK 436
Query: 84 SRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGC 143
+ +V M R R +SWN+II+A + + A++ M + S +S +S C
Sbjct: 437 ACRVFQLMEARDR--ISWNTIITALDQNGYCEAAMMNYCLMRQNSIGPSNFAAISGLSSC 494
Query: 144 S----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSW 199
+ G +HC K GL + ++N+++ MY + G+++E IF+ + +VSW
Sbjct: 495 AGLGLLAAGQQLHCDAVKWGLYL-DTSVSNALVKMYGECGRMSECWEIFNSMSAHDVVSW 553
Query: 200 TTIIGGYVNV-GNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLL 258
+I+G + + E+ + + M + + P+ V F+N + + L L +HS++L
Sbjct: 554 NSIMGVMASSQAPITESVQVFSNMMKSGLVPNKVTFVNFLAALTPLSVLELGKQIHSVML 613
Query: 259 KSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVL-EKSVFLWTSMIGGYAQLGYPSEAV 317
K G ++ +DN L+S Y K GD++ R+F + + W SMI GY G+ EA+
Sbjct: 614 KHGVTEDNAVDNALMSCYAKSGDVDSCERLFSRMSGRRDAISWNSMISGYIYNGHLQEAM 673
Query: 318 NLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMF 377
+ ++ + + T + L+ACA + +L +G E+ + + + LES+ V+++L+ M+
Sbjct: 674 DCVCLMMHSEQMMDHCTFSIVLNACASVAALERGMEMHAFGLRSHLESDVVVESALVDMY 733
Query: 378 SKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVY 437
SKCGRI+ A +VF + K+ W++MI+GYA HG+G +AL +F +MQ G PD V +
Sbjct: 734 SKCGRIDYASKVFHSMSQKNEFSWNSMISGYARHGLGRKALEIFEEMQE-SGESPDHVTF 792
Query: 438 TSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMP 497
S+LSACSH+G+V+ GL +F+ M+ ++GI P IEHY C++DLLGRAG D + + MP
Sbjct: 793 VSVLSACSHAGLVERGLDYFELME-DYGILPRIEHYSCVIDLLGRAGELDKIQEYMKRMP 851
Query: 498 VEVQAQVWAPLLSACM--KHH-NVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKE 554
++ +W +L AC KH ++LG A++ LL L P + NY+L + + G W++
Sbjct: 852 MKPNTLIWRTVLVACQQSKHRAKIDLGTEASRMLLELEPQNPVNYVLSSKFHAAIGRWED 911
Query: 555 AATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKELHIKLLEAGY 614
A AR M + KE G S V + V F+AGDRSH + +I + L L K+ AGY
Sbjct: 912 TAKARAAMKGAAVKKEAGRSWVTLTDGVHTFIAGDRSHPNTKEIYEKLNFLIQKIRNAGY 971
Query: 615 IAEADIV 621
+ + V
Sbjct: 972 VPLTEYV 978
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 112/407 (27%), Positives = 202/407 (49%), Gaps = 12/407 (2%)
Query: 7 NNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAF 66
NG E + Y M Q + ++F L +CA + + G+++H +K G D
Sbjct: 461 QNGYCEAAMMNYCLMRQNSIGPSNFAAISGLSSCAGLGLLAAGQQLHCDAVKWGLYLDTS 520
Query: 67 VQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIIS--AHSRACLNDEAILVLKEM 124
V L+ MY +C ++ + M VVSWNSI+ A S+A + E++ V M
Sbjct: 521 VSNALVKMYGECGRMSECWEIFNSMSAH--DVVSWNSIMGVMASSQAPIT-ESVQVFSNM 577
Query: 125 WVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGK 180
GL + TFV+ ++ + G +H + K G+ + + N++MS YAK G
Sbjct: 578 MKSGLVPNKVTFVNFLAALTPLSVLELGKQIHSVMLKHGVTEDN-AVDNALMSCYAKSGD 636
Query: 181 VNEARSIFDEI-GETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLIL 239
V+ +F + G +SW ++I GY+ G++ EA M D F ++
Sbjct: 637 VDSCERLFSRMSGRRDAISWNSMISGYIYNGHLQEAMDCVCLMMHSEQMMDHCTFSIVLN 696
Query: 240 GCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFL 299
CA V L + MH+ L+S ++ +++ LV MY+KCG ++ A +VF ++ +K+ F
Sbjct: 697 ACASVAALERGMEMHAFGLRSHLESDVVVESALVDMYSKCGRIDYASKVFHSMSQKNEFS 756
Query: 300 WTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIV 359
W SMI GYA+ G +A+ +F+ + ++ P+ T + LSAC+ G + +G + E +
Sbjct: 757 WNSMISGYARHGLGRKALEIFEEMQESGESPDHVTFVSVLSACSHAGLVERGLDYFELME 816
Query: 360 LNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDK-DLAVWSAMI 405
G+ + + +I + + G ++K +E +R+P K + +W ++
Sbjct: 817 DYGILPRIEHYSCVIDLLGRAGELDKIQEYMKRMPMKPNTLIWRTVL 863
Score = 131 bits (330), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 118/460 (25%), Positives = 225/460 (48%), Gaps = 32/460 (6%)
Query: 8 NGSFEETLSTYSSMLQ--TGVHGNSFTFPLVLKACAN--INSIWDGKRVHSHVLKVGFQQ 63
+G E+ + +ML+ G SFTF VL+AC + + + +VH V K F
Sbjct: 144 SGLPEDAFPLFRAMLREGPGCRPTSFTFGSVLRACQDSGPDRLGFAVQVHGLVSKTEFTS 203
Query: 64 DAFVQTGLIDMYSKCS--DFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVL 121
+ V LI MY CS + +++V D PV R +++WN+++S +++ +AI
Sbjct: 204 NTTVCNALISMYGSCSVGPPILAQRVFDTTPV--RDLITWNALMSVYAK---RGDAICTF 258
Query: 122 KEMWVL-----GLELSAS--TFVSVV-----SGCSFRQGISMHCCVYKLGLLNNEIPLAN 169
+ G+EL + TF S++ S CS + V K G ++++ + +
Sbjct: 259 TLFRAMQYDDSGIELRPTEHTFGSLITATYLSSCSLGLLDQLFVRVLKSG-CSSDLYVGS 317
Query: 170 SVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTP 229
+++S +A+ G ++EA+ I+ + E + V+ +I G V + EA R S
Sbjct: 318 ALVSAFARHGMLDEAKDIYLGLKERNAVTLNGLIAGLVKQQH-GEAAAEIFMGARDSAAV 376
Query: 230 DLVVFLNLILGCAQVGN----LFLALSMHSLLLKSGY-NNEDPLDNLLVSMYTKCGDLEL 284
++ ++ L+ A+ L +H+ +L++G+ + + N LV+MY KCG ++
Sbjct: 377 NVDTYVVLLSAIAEFSTAEQGLRKGREVHAHVLRAGHIYRKIAVSNGLVNMYAKCGAIDK 436
Query: 285 ARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAE 344
A RVF + + W ++I Q GY A+ + + + S+ P+ + LS+CA
Sbjct: 437 ACRVFQLMEARDRISWNTIITALDQNGYCEAAMMNYCLMRQNSIGPSNFAAISGLSSCAG 496
Query: 345 LGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAM 404
LG L+ G+++ V GL + V +L+ M+ +CGR+++ E+F + D+ W+++
Sbjct: 497 LGLLAAGQQLHCDAVKWGLYLDTSVSNALVKMYGECGRMSECWEIFNSMSAHDVVSWNSI 556
Query: 405 INGYA-IHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSA 443
+ A +++ +F M GL P+ V + + L+A
Sbjct: 557 MGVMASSQAPITESVQVFSNMMK-SGLVPNKVTFVNFLAA 595
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 114/455 (25%), Positives = 210/455 (46%), Gaps = 28/455 (6%)
Query: 52 VHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRA 111
+H V+K G D F+ L++ Y+K + ++R+V D MP R+ VSW +IS H +
Sbjct: 87 LHLEVVKRGLTHDLFLANHLVNSYAKGARLDAARRVFDGMPG--RNAVSWTCLISGHVLS 144
Query: 112 CLNDEAILVLKEMWV--LGLELSASTFVSVVSGCS----FRQG--ISMHCCVYKLGLLNN 163
L ++A + + M G ++ TF SV+ C R G + +H V K +N
Sbjct: 145 GLPEDAFPLFRAMLREGPGCRPTSFTFGSVLRACQDSGPDRLGFAVQVHGLVSKTEFTSN 204
Query: 164 EIPLANSVMSMYA--KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQ 221
+ N+++SMY G A+ +FD +++W ++ Y G+ F L
Sbjct: 205 -TTVCNALISMYGSCSVGPPILAQRVFDTTPVRDLITWNALMSVYAKRGDAICTFTLFRA 263
Query: 222 MRR----MSVTPDLVVFLNLILGCA-QVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMY 276
M+ + + P F +LI +L L + +LKSG +++ + + LVS +
Sbjct: 264 MQYDDSGIELRPTEHTFGSLITATYLSSCSLGLLDQLFVRVLKSGCSSDLYVGSALVSAF 323
Query: 277 TKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLA 336
+ G L+ A+ ++ + E++ +I G + + A +F + S N T
Sbjct: 324 ARHGMLDEAKDIYLGLKERNAVTLNGLIAGLVKQQHGEAAAEIFMG-ARDSAAVNVDTYV 382
Query: 337 TTLSACAELGS----LSKGKEIEEYIVLNG-LESNRQVQTSLIHMFSKCGRINKAKEVFE 391
LSA AE + L KG+E+ +++ G + V L++M++KCG I+KA VF+
Sbjct: 383 VLLSAIAEFSTAEQGLRKGREVHAHVLRAGHIYRKIAVSNGLVNMYAKCGAIDKACRVFQ 442
Query: 392 RVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVD 451
+ +D W+ +I +G + A+ + Y + + P S LS+C+ G++
Sbjct: 443 LMEARDRISWNTIITALDQNGYCEAAM-MNYCLMRQNSIGPSNFAAISGLSSCAGLGLLA 501
Query: 452 DGLSFF-KSMQSNFGIEPSIEHYLCLVDLLGRAGR 485
G +++ ++ S+ + LV + G GR
Sbjct: 502 AGQQLHCDAVKWGLYLDTSVSN--ALVKMYGECGR 534
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 108/424 (25%), Positives = 200/424 (47%), Gaps = 34/424 (8%)
Query: 150 SMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNV 209
S+H V K GL +++ LAN +++ YAK +++ AR +FD + + VSWT +I G+V
Sbjct: 86 SLHLEVVKRGL-THDLFLANHLVNSYAKGARLDAARRVFDGMPGRNAVSWTCLISGHVLS 144
Query: 210 GNVNEAFGLCNQMRR--MSVTPDLVVFLNLILGCAQVG--NLFLALSMHSLLLKSGYNNE 265
G +AF L M R P F +++ C G L A+ +H L+ K+ + +
Sbjct: 145 GLPEDAFPLFRAMLREGPGCRPTSFTFGSVLRACQDSGPDRLGFAVQVHGLVSKTEFTSN 204
Query: 266 DPLDNLLVSMYTKC--GDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRL 323
+ N L+SMY C G LA+RVFD + + W +++ YA+ G LF+ +
Sbjct: 205 TTVCNALISMYGSCSVGPPILAQRVFDTTPVRDLITWNALMSVYAKRGDAICTFTLFRAM 264
Query: 324 L----KTSVRPNEATL-----ATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLI 374
+RP E T AT LS+C+ LG L ++ ++ +G S+ V ++L+
Sbjct: 265 QYDDSGIELRPTEHTFGSLITATYLSSCS-LGLLD---QLFVRVLKSGCSSDLYVGSALV 320
Query: 375 HMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDA 434
F++ G +++AK+++ + +++ + +I G G+ A +F + + D
Sbjct: 321 SAFARHGMLDEAKDIYLGLKERNAVTLNGLIAGLVKQQHGEAAAEIFMGARDSAAVNVD- 379
Query: 435 VVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLC----LVDLLGRAGRFDLAL 490
Y +LSA + + GL + + ++ I + LV++ + G D A
Sbjct: 380 -TYVVLLSAIAEFSTAEQGLRKGREVHAHVLRAGHIYRKIAVSNGLVNMYAKCGAIDKAC 438
Query: 491 KTIHEMPVEVQAQV-WAPLLSACMKHHNVELGEYAAKNLLTLNPGSTG--NYILMANLFT 547
+ M E + ++ W +++A ++ E A N + S G N+ ++ L +
Sbjct: 439 RVFQLM--EARDRISWNTIITALDQNGYCEA---AMMNYCLMRQNSIGPSNFAAISGLSS 493
Query: 548 SAGM 551
AG+
Sbjct: 494 CAGL 497
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/308 (23%), Positives = 150/308 (48%), Gaps = 13/308 (4%)
Query: 5 STNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQD 64
+++ E++ +S+M+++G+ N TF L A ++ + GK++HS +LK G +D
Sbjct: 561 ASSQAPITESVQVFSNMMKSGLVPNKVTFVNFLAALTPLSVLELGKQIHSVMLKHGVTED 620
Query: 65 AFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEM 124
V L+ Y+K D S ++ M R R +SWNS+IS + EA+ + M
Sbjct: 621 NAVDNALMSCYAKSGDVDSCERLFSRMSGR-RDAISWNSMISGYIYNGHLQEAMDCVCLM 679
Query: 125 WVLGLELSASTFVSVVSGC----SFRQGISMHCCVYKLGL---LNNEIPLANSVMSMYAK 177
+ TF V++ C + +G+ MH GL L +++ + ++++ MY+K
Sbjct: 680 MHSEQMMDHCTFSIVLNACASVAALERGMEMH----AFGLRSHLESDVVVESALVDMYSK 735
Query: 178 FGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNL 237
G+++ A +F + + + SW ++I GY G +A + +M+ +PD V F+++
Sbjct: 736 CGRIDYASKVFHSMSQKNEFSWNSMISGYARHGLGRKALEIFEEMQESGESPDHVTFVSV 795
Query: 238 ILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAV-LEKS 296
+ C+ G + L L+ G + ++ + + G+L+ + + ++ +
Sbjct: 796 LSACSHAGLVERGLDYFELMEDYGILPRIEHYSCVIDLLGRAGELDKIQEYMKRMPMKPN 855
Query: 297 VFLWTSMI 304
+W +++
Sbjct: 856 TLIWRTVL 863
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 111/243 (45%), Gaps = 33/243 (13%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI NG +E + M+ + + TF +VL ACA++ ++ G +H+ L+
Sbjct: 659 MISGYIYNGHLQEAMDCVCLMMHSEQMMDHCTFSIVLNACASVAALERGMEMHAFGLRSH 718
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+ D V++ L+DMYSKC + KV M ++ SWNS+IS ++R L +A+ +
Sbjct: 719 LESDVVVESALVDMYSKCGRIDYASKVFHSMS--QKNEFSWNSMISGYARHGLGRKALEI 776
Query: 121 LKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGK 180
+EM G TFVSV+S CS H + + GL E+ M Y +
Sbjct: 777 FEEMQESGESPDHVTFVSVLSACS-------HAGLVERGLDYFEL------MEDYGILPR 823
Query: 181 VNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILG 240
+ + D +G G +++ + M+RM + P+ +++ +++
Sbjct: 824 IEHYSCVIDLLGRA---------------GELDK---IQEYMKRMPMKPNTLIWRTVLVA 865
Query: 241 CAQ 243
C Q
Sbjct: 866 CQQ 868
>gi|449433131|ref|XP_004134351.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g03580-like [Cucumis sativus]
Length = 895
Score = 338 bits (867), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 188/620 (30%), Positives = 324/620 (52%), Gaps = 8/620 (1%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+I +NG +E+ L Y TG+ + FT VL AC ++ ++ +G VH + K+G
Sbjct: 193 LISGYCSNGFWEDALDMYHKFRMTGMVPDCFTMSSVLLACGSLMAVKEGVAVHGVIEKIG 252
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
D + GL+ MY K +R+V +M V+ V+WN++I +++ ++ ++ +
Sbjct: 253 IAGDVIIGNGLLSMYFKFERLREARRVFSKMAVK--DSVTWNTMICGYAQLGRHEASVKL 310
Query: 121 LKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGL---LNNEIPLANSVMSMYAK 177
+M + G + S + C + + V+K + + N ++ MYAK
Sbjct: 311 FMDM-IDGFVPDMLSITSTIRACGQSGDLQVGKFVHKYLIGSGFECDTVACNILIDMYAK 369
Query: 178 FGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNL 237
G + A+ +FD V+W ++I GY G E +M +M PD V F+ L
Sbjct: 370 CGDLLAAQEVFDTTKCKDSVTWNSLINGYTQSGYYKEGLE-SFKMMKMERKPDSVTFVLL 428
Query: 238 ILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSV 297
+ +Q+ ++ +H ++K G+ E + N L+ +Y KCG+++ +VF + +
Sbjct: 429 LSIFSQLADINQGRGIHCDVIKFGFEAELIIGNSLLDVYAKCGEMDDLLKVFSYMSAHDI 488
Query: 298 FLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEY 357
W ++I + + + + P+EAT+ L C+ L +GKEI Y
Sbjct: 489 ISWNTVIASSVHFDDCTVGFQMINEMRTEGLMPDEATVLGILPMCSLLAVRRQGKEIHGY 548
Query: 358 IVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQA 417
I +G ESN + +LI M+SKCG + +VF+ + +KD+ W+A+I+ + ++G G +A
Sbjct: 549 IFKSGFESNVPIGNALIEMYSKCGSLENCIKVFKYMKEKDVVTWTALISAFGMYGEGKKA 608
Query: 418 LNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLV 477
L F M+ + G+ PD+V + + + ACSHSGMV +GL FF M++++ +EP +EHY C+V
Sbjct: 609 LKAFQDME-LSGVLPDSVAFIAFIFACSHSGMVKEGLRFFDRMKTDYNLEPRMEHYACVV 667
Query: 478 DLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTG 537
DLL R+G A + I MP++ A +W LLSAC N + + +K +L LN TG
Sbjct: 668 DLLARSGLLAQAEEFILSMPMKPDASLWGALLSACRARGNTNIAQRVSKKILELNSDDTG 727
Query: 538 NYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVD 597
Y+L++N++ + G W + T R M + L KEPG S +EI V VF GD+S
Sbjct: 728 YYVLVSNIYATLGKWDQVKTVRNSMKTKGLKKEPGSSWIEIQKRVYVFRTGDKSFEQYDK 787
Query: 598 IRKTLKELHIKLLEAGYIAE 617
++ L+ L + + GY+A+
Sbjct: 788 VKDLLEYLVRLMAKEGYVAD 807
Score = 244 bits (622), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 157/523 (30%), Positives = 263/523 (50%), Gaps = 28/523 (5%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+IR T+NG F + L Y+ M + + ++FTFP V+ +CA I + G VH H +++G
Sbjct: 92 IIRALTHNGLFTQALGYYTEMREKKLQPDAFTFPSVINSCARILDLELGCIVHEHAMEMG 151
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F+ D ++ LIDMYS+ D ++R V +EM R VSWNS+IS + ++A+ +
Sbjct: 152 FESDLYIGNALIDMYSRFVDLDNARYVFEEMSN--RDSVSWNSLISGYCSNGFWEDALDM 209
Query: 121 LKEMWVLGLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
+ + G+ T SV+ C + ++G+++H + K+G+ + I + N ++SMY
Sbjct: 210 YHKFRMTGMVPDCFTMSSVLLACGSLMAVKEGVAVHGVIEKIGIAGDVI-IGNGLLSMYF 268
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
KF ++ EAR +F ++ V+W T+I GY +G + L M PD++ +
Sbjct: 269 KFERLREARRVFSKMAVKDSVTWNTMICGYAQLGRHEASVKLFMDMID-GFVPDMLSITS 327
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
I C Q G+L + +H L+ SG+ + N+L+ MY KCGDL A+ VFD K
Sbjct: 328 TIRACGQSGDLQVGKFVHKYLIGSGFECDTVACNILIDMYAKCGDLLAAQEVFDTTKCKD 387
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEE 356
W S+I GY Q GY E + FK ++K +P+ T LS ++L +++G+ I
Sbjct: 388 SVTWNSLINGYTQSGYYKEGLESFK-MMKMERKPDSVTFVLLLSIFSQLADINQGRGIHC 446
Query: 357 YIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIH----G 412
++ G E+ + SL+ +++KCG ++ +VF + D+ W+ +I ++H
Sbjct: 447 DVIKFGFEAELIIGNSLLDVYAKCGEMDDLLKVFSYMSAHDIISWNTVI-ASSVHFDDCT 505
Query: 413 MGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLS----FFKSMQSNFGIEP 468
+G Q +N EGL PD IL CS + G FKS G E
Sbjct: 506 VGFQMIN----EMRTEGLMPDEATVLGILPMCSLLAVRRQGKEIHGYIFKS-----GFES 556
Query: 469 SIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSA 511
++ L+++ + G + +K M E W L+SA
Sbjct: 557 NVPIGNALIEMYSKCGSLENCIKVFKYMK-EKDVVTWTALISA 598
Score = 199 bits (507), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 133/450 (29%), Positives = 225/450 (50%), Gaps = 8/450 (1%)
Query: 50 KRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHS 109
+ VHS ++ G LI Y++ D +SS V + +V WNSII A +
Sbjct: 39 RTVHSLIITSGLSLSVIFSGKLISKYAQVKDPISSVSVFRSIS-PTNNVYLWNSIIRALT 97
Query: 110 RACLNDEAILVLKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGL---LNNEIP 166
L +A+ EM L+ A TF SV++ C+ + + C V++ + +++
Sbjct: 98 HNGLFTQALGYYTEMREKKLQPDAFTFPSVINSCARILDLELGCIVHEHAMEMGFESDLY 157
Query: 167 LANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMS 226
+ N+++ MY++F ++ AR +F+E+ VSW ++I GY + G +A + ++ R
Sbjct: 158 IGNALIDMYSRFVDLDNARYVFEEMSNRDSVSWNSLISGYCSNGFWEDALDMYHKFRMTG 217
Query: 227 VTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELAR 286
+ PD +++L C + + +++H ++ K G + + N L+SMY K L AR
Sbjct: 218 MVPDCFTMSSVLLACGSLMAVKEGVAVHGVIEKIGIAGDVIIGNGLLSMYFKFERLREAR 277
Query: 287 RVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELG 346
RVF + K W +MI GYAQLG +V LF ++ V P+ ++ +T+ AC + G
Sbjct: 278 RVFSKMAVKDSVTWNTMICGYAQLGRHEASVKLFMDMIDGFV-PDMLSITSTIRACGQSG 336
Query: 347 SLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMIN 406
L GK + +Y++ +G E + LI M++KCG + A+EVF+ KD W+++IN
Sbjct: 337 DLQVGKFVHKYLIGSGFECDTVACNILIDMYAKCGDLLAAQEVFDTTKCKDSVTWNSLIN 396
Query: 407 GYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGI 466
GY G + L F KM +E KPD+V + +LS S ++ G + FG
Sbjct: 397 GYTQSGYYKEGLESF-KMMKME-RKPDSVTFVLLLSIFSQLADINQGRGIHCDV-IKFGF 453
Query: 467 EPSIEHYLCLVDLLGRAGRFDLALKTIHEM 496
E + L+D+ + G D LK M
Sbjct: 454 EAELIIGNSLLDVYAKCGEMDDLLKVFSYM 483
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 97/388 (25%), Positives = 186/388 (47%), Gaps = 5/388 (1%)
Query: 161 LNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVS-WTTIIGGYVNVGNVNEAFGLC 219
L+ + + ++S YA+ + S+F I T+ V W +II + G +A G
Sbjct: 50 LSLSVIFSGKLISKYAQVKDPISSVSVFRSISPTNNVYLWNSIIRALTHNGLFTQALGYY 109
Query: 220 NQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKC 279
+MR + PD F ++I CA++ +L L +H ++ G+ ++ + N L+ MY++
Sbjct: 110 TEMREKKLQPDAFTFPSVINSCARILDLELGCIVHEHAMEMGFESDLYIGNALIDMYSRF 169
Query: 280 GDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTL 339
DL+ AR VF+ + + W S+I GY G+ +A++++ + T + P+ T+++ L
Sbjct: 170 VDLDNARYVFEEMSNRDSVSWNSLISGYCSNGFWEDALDMYHKFRMTGMVPDCFTMSSVL 229
Query: 340 SACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLA 399
AC L ++ +G + I G+ + + L+ M+ K R+ +A+ VF ++ KD
Sbjct: 230 LACGSLMAVKEGVAVHGVIEKIGIAGDVIIGNGLLSMYFKFERLREARRVFSKMAVKDSV 289
Query: 400 VWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKS 459
W+ MI GYA G + ++ LF M ++G PD + TS + AC SG + G F
Sbjct: 290 TWNTMICGYAQLGRHEASVKLF--MDMIDGFVPDMLSITSTIRACGQSGDLQVG-KFVHK 346
Query: 460 MQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVE 519
G E L+D+ + G LA + + + + W L++ + +
Sbjct: 347 YLIGSGFECDTVACNILIDMYAKCGDL-LAAQEVFDTTKCKDSVTWNSLINGYTQSGYYK 405
Query: 520 LGEYAAKNLLTLNPGSTGNYILMANLFT 547
G + K + + ++L+ ++F+
Sbjct: 406 EGLESFKMMKMERKPDSVTFVLLLSIFS 433
>gi|297740913|emb|CBI31095.3| unnamed protein product [Vitis vinifera]
Length = 768
Score = 338 bits (867), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 190/591 (32%), Positives = 310/591 (52%), Gaps = 49/591 (8%)
Query: 13 ETLSTYSSMLQTGVHGNSFTFPLVLKACAN--------------INSIWDGKRVHSHVLK 58
E + ML+ +H +S + VL C+ ++S G++VH +K
Sbjct: 192 EAFRLFRLMLRNRIHVDSVSLSSVLGVCSRGGCGEFGLHDSNDVLSSDVHGQQVHCLTIK 251
Query: 59 VGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAI 118
GF+ D + L+DMY+K + S+ + MP SVVSWN +I+ + + + +AI
Sbjct: 252 HGFESDLHLNNSLLDMYAKNGNMDSAEMIFVNMPEV--SVVSWNVMIAGYGQKSQSSKAI 309
Query: 119 LVLKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKF 178
L+ M G E T+V+++ C K
Sbjct: 310 EYLQRMQYHGFEPDEITYVNMLVAC--------------------------------IKS 337
Query: 179 GKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLI 238
G + R +FD + S+ SW TI+ GY N EA L +M+ SV PD ++
Sbjct: 338 GDIEAGRQMFDGMSSPSLSSWNTILSGYSQNENHKEAVKLFREMQFRSVHPDRTTLAIIL 397
Query: 239 LGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVF 298
A + L +H++ K+ + + L + L+ MY+KCG +E+A+R+FD + E +
Sbjct: 398 SSLAGMMLLEGGRQVHAVSQKAVFRTDIYLASGLIGMYSKCGKVEMAKRIFDRIAELDIV 457
Query: 299 LWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYI 358
W SM+ G + EA FK++ + + P++ + AT LS CA+L SLS+G+++ I
Sbjct: 458 CWNSMMAGLSLNSLDKEAFTFFKKMREKGMFPSQFSYATVLSCCAKLSSLSQGRQVHSQI 517
Query: 359 VLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQAL 418
G ++ V ++LI M+SKCG ++ A+ VF+ + K+ W+ MI+GYA +G GD+A+
Sbjct: 518 AREGYMNDAFVGSALIDMYSKCGDVDAARWVFDMMLGKNTVTWNEMIHGYAQNGCGDEAV 577
Query: 419 NLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVD 478
L Y+ G KPD + + ++L+ACSHSG+VD G+ F SMQ G+EP ++HY C++D
Sbjct: 578 -LLYEDMIGSGEKPDGITFVAVLTACSHSGLVDTGIKIFNSMQQEHGVEPLVDHYTCIID 636
Query: 479 LLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGN 538
LGRAGR A I +MP + +W LLS+C + +V L AA+ L L+P ++
Sbjct: 637 SLGRAGRLHEAEVLIDKMPCKYDPIIWEVLLSSCRVYADVSLARRAAEELFHLDPQNSAP 696
Query: 539 YILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGD 589
Y+L+AN+++S G W +A R LM ++ K+PG+S +E +Q F+ D
Sbjct: 697 YVLLANIYSSLGRWDDAKAVRELMSYNQVVKDPGYSWIEHKNGMQAFMVDD 747
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 141/564 (25%), Positives = 255/564 (45%), Gaps = 100/564 (17%)
Query: 36 VLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRL 95
+L+ C + + GK +H+H+L+ D F+ LI+ Y+KC+ +SR++ D+MP R
Sbjct: 11 LLQTCIDKKAHLAGKLIHAHMLRSRLSDDTFLSNRLIEFYAKCNAIDASRRLFDQMPKR- 69
Query: 96 RSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVS---GC----SFRQG 148
+ +WN+I+ A+ +A ++A ++ EM + +S +T +S ++ C G
Sbjct: 70 -DIYTWNAILGAYCKASELEDAHVLFAEMPERNI-VSWNTLISALTRNGACGALVDVECG 127
Query: 149 ISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVN 208
H K+GL NN I + N+++ MYAK + +A F ++ E + VS+T ++GG +
Sbjct: 128 RRCHGISIKIGLDNN-IYVGNALLGMYAKCRCIGDAIQAFGDVPEPNEVSFTAMMGGLAD 186
Query: 209 VGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLAL--------------SMH 254
VNEAF L M R + D V +++ C++ G L +H
Sbjct: 187 SDQVNEAFRLFRLMLRNRIHVDSVSLSSVLGVCSRGGCGEFGLHDSNDVLSSDVHGQQVH 246
Query: 255 SLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPS 314
L +K G+ ++ L+N L+ MY K G+++ A +F + E SV W MI GY Q S
Sbjct: 247 CLTIKHGFESDLHLNNSLLDMYAKNGNMDSAEMIFVNMPEVSVVSWNVMIAGYGQKSQSS 306
Query: 315 EAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYI----------VLNG-- 362
+A+ +R+ P+E T L AC + G + G+++ + + +L+G
Sbjct: 307 KAIEYLQRMQYHGFEPDEITYVNMLVACIKSGDIEAGRQMFDGMSSPSLSSWNTILSGYS 366
Query: 363 ---------------------------------------LESNRQVQ------------- 370
LE RQV
Sbjct: 367 QNENHKEAVKLFREMQFRSVHPDRTTLAIILSSLAGMMLLEGGRQVHAVSQKAVFRTDIY 426
Query: 371 --TSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVE 428
+ LI M+SKCG++ AK +F+R+ + D+ W++M+ G +++ + +A F KM+ +
Sbjct: 427 LASGLIGMYSKCGKVEMAKRIFDRIAELDIVCWNSMMAGLSLNSLDKEAFTFFKKMRE-K 485
Query: 429 GLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYL---CLVDLLGRAGR 485
G+ P Y ++LS C+ + G + + S E + L+D+ + G
Sbjct: 486 GMFPSQFSYATVLSCCAKLSSLSQG----RQVHSQIAREGYMNDAFVGSALIDMYSKCGD 541
Query: 486 FDLALKTIHEMPVEVQAQVWAPLL 509
D A + + +M + W ++
Sbjct: 542 VD-AARWVFDMMLGKNTVTWNEMI 564
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 125/244 (51%), Gaps = 7/244 (2%)
Query: 6 TNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDA 65
+ N + +E + + M VH + T ++L + A + + G++VH+ K F+ D
Sbjct: 366 SQNENHKEAVKLFREMQFRSVHPDRTTLAIILSSLAGMMLLEGGRQVHAVSQKAVFRTDI 425
Query: 66 FVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMW 125
++ +GLI MYSKC ++++ D + +V WNS+++ S L+ EA K+M
Sbjct: 426 YLASGLIGMYSKCGKVEMAKRIFDR--IAELDIVCWNSMMAGLSLNSLDKEAFTFFKKMR 483
Query: 126 VLGLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKV 181
G+ S ++ +V+S C S QG +H + + G +N+ + ++++ MY+K G V
Sbjct: 484 EKGMFPSQFSYATVLSCCAKLSSLSQGRQVHSQIAREGYMNDAF-VGSALIDMYSKCGDV 542
Query: 182 NEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGC 241
+ AR +FD + + V+W +I GY G +EA L M PD + F+ ++ C
Sbjct: 543 DAARWVFDMMLGKNTVTWNEMIHGYAQNGCGDEAVLLYEDMIGSGEKPDGITFVAVLTAC 602
Query: 242 AQVG 245
+ G
Sbjct: 603 SHSG 606
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 139/300 (46%), Gaps = 38/300 (12%)
Query: 12 EETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGL 71
+E + + M + G+ + F++ VL CA ++S+ G++VHS + + G+ DAFV + L
Sbjct: 473 KEAFTFFKKMREKGMFPSQFSYATVLSCCAKLSSLSQGRQVHSQIAREGYMNDAFVGSAL 532
Query: 72 IDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLEL 131
IDMYSKC D ++R V D M ++ V+WN +I +++ DEA+L+ ++M G +
Sbjct: 533 IDMYSKCGDVDAARWVFDMMLG--KNTVTWNEMIHGYAQNGCGDEAVLLYEDMIGSGEKP 590
Query: 132 SASTFVSVVSGCSFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEI 191
TFV+V++ CS GL++ I + NS+ + V+ I D +
Sbjct: 591 DGITFVAVLTACSHS------------GLVDTGIKIFNSMQQEHGVEPLVDHYTCIIDSL 638
Query: 192 GETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLAL 251
G G ++EA L + +M D +++ L+ C ++ LA
Sbjct: 639 GRA---------------GRLHEAEVLID---KMPCKYDPIIWEVLLSSCRVYADVSLAR 680
Query: 252 SMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRV-----FDAVLEKSVFLWTSMIGG 306
L N P LL ++Y+ G + A+ V ++ V++ + W G
Sbjct: 681 RAAEELFHLDPQNSAPY-VLLANIYSSLGRWDDAKAVRELMSYNQVVKDPGYSWIEHKNG 739
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/114 (23%), Positives = 60/114 (52%), Gaps = 5/114 (4%)
Query: 335 LATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVP 394
LA+ L C + + GK I +++ + L + + LI ++KC I+ ++ +F+++P
Sbjct: 8 LASLLQTCIDKKAHLAGKLIHAHMLRSRLSDDTFLSNRLIEFYAKCNAIDASRRLFDQMP 67
Query: 395 DKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSG 448
+D+ W+A++ Y + A LF +M + + V + +++SA + +G
Sbjct: 68 KRDIYTWNAILGAYCKASELEDAHVLFAEMP-----ERNIVSWNTLISALTRNG 116
>gi|297738034|emb|CBI27235.3| unnamed protein product [Vitis vinifera]
Length = 696
Score = 338 bits (867), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 190/562 (33%), Positives = 307/562 (54%), Gaps = 40/562 (7%)
Query: 96 RSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCS----FRQGISM 151
RS SW + + +R+ EAI EM V G F +V+ S + G +
Sbjct: 55 RSTASWVDALRSRTRSNDFREAISTYIEMTVSGARPDNFAFPAVLKAVSGLQDLKTGEQI 114
Query: 152 HCCVYKLGLLNNEIPLANSV--------------------MSMYAKFGKVNEARSIFDEI 191
H K G ++ + +AN++ M+MYAK G+V++++++F+
Sbjct: 115 HAAAVKFGYGSSSVTVANTLVNMYGKCGGIGDKTFTNNALMAMYAKLGRVDDSKALFESF 174
Query: 192 GETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLAL 251
+ +VSW T+I + +EA M V D V +++ C+ + L +
Sbjct: 175 VDRDMVSWNTMISSFSQSDRFSEALAFFRLMVLEGVELDGVTIASVLPACSHLERLDVGK 234
Query: 252 SMHSLLLKSGYNNEDPLDN-----LLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGG 306
+H+ +L+ N D ++N LV MY C +E RRVFD +L + + LW +MI G
Sbjct: 235 EIHAYVLR----NNDLIENSFVGSALVDMYCNCRQVESGRRVFDHILGRRIELWNAMISG 290
Query: 307 YAQLGYPSEAVNLFKRLLKTS-VRPNEATLATTLSACAE-LGSLSKGKEIEEYIVLNGLE 364
YA+ G +A+ LF ++K + + PN T+A+ + AC L +++KGKEI Y + N L
Sbjct: 291 YARNGLDEKALILFIEMIKVAGLLPNTTTMASVMPACVHSLAAIAKGKEIHAYAIRNMLA 350
Query: 365 SNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKM 424
S+ V ++L+ M++KCG +N ++ VF +P+K++ W+ +I +HG G++AL LF M
Sbjct: 351 SDITVGSALVDMYAKCGCLNLSRRVFNEMPNKNVITWNVLIMACGMHGKGEEALELFKNM 410
Query: 425 QHVEG----LKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLL 480
G KP+ V + ++ +ACSHSG++ +GL+ F M+ + G+EP+ +HY C+VDLL
Sbjct: 411 VAEAGRGGEAKPNEVTFITVFAACSHSGLISEGLNLFYRMKHDHGVEPTSDHYACVVDLL 470
Query: 481 GRAGRFDLALKTIHEMPVEV-QAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNY 539
GRAG+ + A + ++ MP E + W+ LL AC H NVELGE AAKNLL L P +Y
Sbjct: 471 GRAGQLEEAYELVNTMPAEFDKVGAWSSLLGACRIHQNVELGEVAAKNLLHLEPNVASHY 530
Query: 540 ILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIR 599
+L++N+++SAG+W +A R M + KEPG S +E V F+AGD SH S +
Sbjct: 531 VLLSNIYSSAGLWNKAMEVRKNMRQMGVKKEPGCSWIEFRDEVHKFMAGDVSHPQSEQLH 590
Query: 600 KTLKELHIKLLEAGYIAEADIV 621
L+ L K+ + GY+ + V
Sbjct: 591 GFLETLSEKMRKEGYVPDTSCV 612
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 127/498 (25%), Positives = 239/498 (47%), Gaps = 45/498 (9%)
Query: 2 IRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGF 61
+R+ T + F E +STY M +G ++F FP VLKA + + + G+++H+ +K G+
Sbjct: 64 LRSRTRSNDFREAISTYIEMTVSGARPDNFAFPAVLKAVSGLQDLKTGEQIHAAAVKFGY 123
Query: 62 QQDAF-VQTGLIDMYSKC---SDFVSSRKVLDEMPVRL---------------RSVVSWN 102
+ V L++MY KC D + L M +L R +VSWN
Sbjct: 124 GSSSVTVANTLVNMYGKCGGIGDKTFTNNALMAMYAKLGRVDDSKALFESFVDRDMVSWN 183
Query: 103 SIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGLLN 162
++IS+ S++ EA+ + M + G+EL T SV+ CS + + + ++ L N
Sbjct: 184 TMISSFSQSDRFSEALAFFRLMVLEGVELDGVTIASVLPACSHLERLDVGKEIHAYVLRN 243
Query: 163 NEIP----LANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGL 218
N++ + ++++ MY +V R +FD I I W +I GY G +A L
Sbjct: 244 NDLIENSFVGSALVDMYCNCRQVESGRRVFDHILGRRIELWNAMISGYARNGLDEKALIL 303
Query: 219 CNQMRRMS-VTPDLVVFLNLILGCAQ-VGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMY 276
+M +++ + P+ +++ C + + +H+ +++ ++ + + LV MY
Sbjct: 304 FIEMIKVAGLLPNTTTMASVMPACVHSLAAIAKGKEIHAYAIRNMLASDITVGSALVDMY 363
Query: 277 TKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVR-----PN 331
KCG L L+RRVF+ + K+V W +I G EA+ LFK ++ + R PN
Sbjct: 364 AKCGCLNLSRRVFNEMPNKNVITWNVLIMACGMHGKGEEALELFKNMVAEAGRGGEAKPN 423
Query: 332 EATLATTLSACAELGSLSKGKEIEEYIVLN-GLESNRQVQTSLIHMFSKCGRINKAKEVF 390
E T T +AC+ G +S+G + + + G+E ++ + + G++ +A E+
Sbjct: 424 EVTFITVFAACSHSGLISEGLNLFYRMKHDHGVEPTSDHYACVVDLLGRAGQLEEAYELV 483
Query: 391 ERVPDK--DLAVWSAMINGYAIHG---MGD-QALNLFYKMQHVEGLKPDAVVYTSILSAC 444
+P + + WS+++ IH +G+ A NL + L+P+ + +LS
Sbjct: 484 NTMPAEFDKVGAWSSLLGACRIHQNVELGEVAAKNLLH-------LEPNVASHYVLLSNI 536
Query: 445 -SHSGMVDDGLSFFKSMQ 461
S +G+ + + K+M+
Sbjct: 537 YSSAGLWNKAMEVRKNMR 554
Score = 115 bits (287), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 85/322 (26%), Positives = 163/322 (50%), Gaps = 20/322 (6%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI + + + F E L+ + M+ GV + T VL AC+++ + GK +H++VL+
Sbjct: 185 MISSFSQSDRFSEALAFFRLMVLEGVELDGVTIASVLPACSHLERLDVGKEIHAYVLRNN 244
Query: 61 -FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAIL 119
+++FV + L+DMY C S R+V D + R + WN++IS ++R L+++A++
Sbjct: 245 DLIENSFVGSALVDMYCNCRQVESGRRVFDH--ILGRRIELWNAMISGYARNGLDEKALI 302
Query: 120 VLKEMW-VLGLELSASTFVSVVSGC-----SFRQGISMHCCVYKLGLLNNEIPLANSVMS 173
+ EM V GL + +T SV+ C + +G +H + +L ++I + ++++
Sbjct: 303 LFIEMIKVAGLLPNTTTMASVMPACVHSLAAIAKGKEIHAYAIR-NMLASDITVGSALVD 361
Query: 174 MYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQM-----RRMSVT 228
MYAK G +N +R +F+E+ ++++W +I G EA L M R
Sbjct: 362 MYAKCGCLNLSRRVFNEMPNKNVITWNVLIMACGMHGKGEEALELFKNMVAEAGRGGEAK 421
Query: 229 PDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNL--LVSMYTKCGDLELAR 286
P+ V F+ + C+ G + L++ +K + E D+ +V + + G LE A
Sbjct: 422 PNEVTFITVFAACSHSGLISEGLNLF-YRMKHDHGVEPTSDHYACVVDLLGRAGQLEEAY 480
Query: 287 RVFDAVLEK--SVFLWTSMIGG 306
+ + + + V W+S++G
Sbjct: 481 ELVNTMPAEFDKVGAWSSLLGA 502
>gi|147838932|emb|CAN63659.1| hypothetical protein VITISV_008415 [Vitis vinifera]
Length = 760
Score = 338 bits (867), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 201/651 (30%), Positives = 323/651 (49%), Gaps = 78/651 (11%)
Query: 45 SIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSI 104
S+ ++ H+H+LK G D + T L+ Y+ F + VLD +P +V S++++
Sbjct: 28 SLSQTRQAHAHILKTGLFNDTHLATKLLSHYANNMCFADATLVLDLVPEP--NVFSFSTL 85
Query: 105 ISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGL 160
I A S+ A+ +M GL S V C+ + +H G
Sbjct: 86 IYAFSKFHQFHHALSTFSQMLTRGLMPDNRVLPSAVKACAGLSALKPARQVHGIASVSGF 145
Query: 161 LNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCN 220
++ + +S++ MY K ++ +A +FD + E +VSW+ ++ Y G V+EA L +
Sbjct: 146 DSDSF-VQSSLVHMYIKCNQIRDAHRVFDRMFEPDVVSWSALVAAYARQGCVDEAKRLFS 204
Query: 221 QMRRMSVTPDLVVFLNLILGCAQVG----------------------------------- 245
+M V P+L+ + +I G G
Sbjct: 205 EMGDSGVQPNLISWNGMIAGFNHSGLYSEAVLMFLDMHLRGFEPDGTTISSVLPAVGDLE 264
Query: 246 NLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKC-------------------------- 279
+L + + +H ++K G ++ + + L+ MY KC
Sbjct: 265 DLVMGILIHGYVIKQGLVSDKCVSSALIDMYGKCSCTSEMSQVFDQMDHMDVGSCNAFIF 324
Query: 280 -----GDLELARRVF----DAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRP 330
G +E + R+F D +E +V WTSMI +Q G EA+ LF+ + V+P
Sbjct: 325 GLSRNGQVESSLRLFRQLKDQGMELNVVSWTSMIACCSQNGRDMEALELFREMQIAGVKP 384
Query: 331 NEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVF 390
N T+ L AC + +L GK + + G+ ++ V ++LI M++KCGRI ++ F
Sbjct: 385 NSVTIPCLLPACGNIAALMHGKAAHCFSLRRGISTDVYVGSALIDMYAKCGRIQASRICF 444
Query: 391 ERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMV 450
+ +P K+L W+A+I GYA+HG +A+ +F MQ G KPD + +T +LSACS SG+
Sbjct: 445 DGIPTKNLVCWNAVIAGYAMHGKAKEAMEIFDLMQR-SGQKPDIISFTCVLSACSQSGLT 503
Query: 451 DDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLS 510
++G +F SM S +GIE +EHY C+V LL RAG+ + A I MPV A VW LLS
Sbjct: 504 EEGSYYFNSMSSKYGIEARVEHYACMVTLLSRAGKLEQAYAMIRRMPVNPDACVWGALLS 563
Query: 511 ACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKE 570
+C H+NV LGE AA+ L L P + GNYIL++N++ S GMW E R +M ++ L K
Sbjct: 564 SCRVHNNVSLGEVAAEKLFELEPSNPGNYILLSNIYASKGMWNEVNRVRDMMKNKGLRKN 623
Query: 571 PGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKELHIKLLEAGYIAEADIV 621
PG S +E+ V + +AGD+SH I + L +L +++ + GY E + V
Sbjct: 624 PGCSWIEVKNKVHMLLAGDKSHPQMTQIIENLDKLSMEMKKLGYFPEINFV 674
Score = 171 bits (434), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 119/492 (24%), Positives = 222/492 (45%), Gaps = 78/492 (15%)
Query: 11 FEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTG 70
F LST+S ML G+ ++ P +KACA ++++ ++VH GF D+FVQ+
Sbjct: 95 FHHALSTFSQMLTRGLMPDNRVLPSAVKACAGLSALKPARQVHGIASVSGFDSDSFVQSS 154
Query: 71 LIDMYSKCSDFVSSRKVLDEM-----------------------PVRLRS---------- 97
L+ MY KC+ + +V D M RL S
Sbjct: 155 LVHMYIKCNQIRDAHRVFDRMFEPDVVSWSALVAAYARQGCVDEAKRLFSEMGDSGVQPN 214
Query: 98 VVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGC----SFRQGISMHC 153
++SWN +I+ + + L EA+L+ +M + G E +T SV+ GI +H
Sbjct: 215 LISWNGMIAGFNHSGLYSEAVLMFLDMHLRGFEPDGTTISSVLPAVGDLEDLVMGILIHG 274
Query: 154 CVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIG--------------------- 192
V K GL++++ ++++++ MY K +E +FD++
Sbjct: 275 YVIKQGLVSDKC-VSSALIDMYGKCSCTSEMSQVFDQMDHMDVGSCNAFIFGLSRNGQVE 333
Query: 193 --------------ETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLI 238
E ++VSWT++I G EA L +M+ V P+ V L+
Sbjct: 334 SSLRLFRQLKDQGMELNVVSWTSMIACCSQNGRDMEALELFREMQIAGVKPNSVTIPCLL 393
Query: 239 LGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVF 298
C + L + H L+ G + + + + L+ MY KCG ++ +R FD + K++
Sbjct: 394 PACGNIAALMHGKAAHCFSLRRGISTDVYVGSALIDMYAKCGRIQASRICFDGIPTKNLV 453
Query: 299 LWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYI 358
W ++I GYA G EA+ +F + ++ +P+ + LSAC++ G +G +
Sbjct: 454 CWNAVIAGYAMHGKAKEAMEIFDLMQRSGQKPDIISFTCVLSACSQSGLTEEGSYYFNSM 513
Query: 359 VLN-GLESNRQVQTSLIHMFSKCGRINKAKEVFERVP-DKDLAVWSAMINGYAIH---GM 413
G+E+ + ++ + S+ G++ +A + R+P + D VW A+++ +H +
Sbjct: 514 SSKYGIEARVEHYACMVTLLSRAGKLEQAYAMIRRMPVNPDACVWGALLSSCRVHNNVSL 573
Query: 414 GDQALNLFYKMQ 425
G+ A ++++
Sbjct: 574 GEVAAEKLFELE 585
Score = 116 bits (290), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 68/233 (29%), Positives = 123/233 (52%), Gaps = 4/233 (1%)
Query: 238 ILGC--AQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEK 295
IL C + +L H+ +LK+G N+ L L+S Y A V D V E
Sbjct: 18 ILNCLNSTTASLSQTRQAHAHILKTGLFNDTHLATKLLSHYANNMCFADATLVLDLVPEP 77
Query: 296 SVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIE 355
+VF ++++I +++ A++ F ++L + P+ L + + ACA L +L +++
Sbjct: 78 NVFSFSTLIYAFSKFHQFHHALSTFSQMLTRGLMPDNRVLPSAVKACAGLSALKPARQVH 137
Query: 356 EYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGD 415
++G +S+ VQ+SL+HM+ KC +I A VF+R+ + D+ WSA++ YA G D
Sbjct: 138 GIASVSGFDSDSFVQSSLVHMYIKCNQIRDAHRVFDRMFEPDVVSWSALVAAYARQGCVD 197
Query: 416 QALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEP 468
+A LF +M G++P+ + + +++ +HSG+ + + F M G EP
Sbjct: 198 EAKRLFSEMGD-SGVQPNLISWNGMIAGFNHSGLYSEAVLMFLDMHLR-GFEP 248
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 83/324 (25%), Positives = 150/324 (46%), Gaps = 41/324 (12%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI ++G + E + + M G + T VL A ++ + G +H +V+K G
Sbjct: 221 MIAGFNHSGLYSEAVLMFLDMHLRGFEPDGTTISSVLPAVGDLEDLVMGILIHGYVIKQG 280
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEM-----------------------PVRL-- 95
D V + LIDMY KCS +V D+M +RL
Sbjct: 281 LVSDKCVSSALIDMYGKCSCTSEMSQVFDQMDHMDVGSCNAFIFGLSRNGQVESSLRLFR 340
Query: 96 --------RSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGC---- 143
+VVSW S+I+ S+ + EA+ + +EM + G++ ++ T ++ C
Sbjct: 341 QLKDQGMELNVVSWTSMIACCSQNGRDMEALELFREMQIAGVKPNSVTIPCLLPACGNIA 400
Query: 144 SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTII 203
+ G + HC + G ++ ++ + ++++ MYAK G++ +R FD I ++V W +I
Sbjct: 401 ALMHGKAAHCFSLRRG-ISTDVYVGSALIDMYAKCGRIQASRICFDGIPTKNLVCWNAVI 459
Query: 204 GGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYN 263
GY G EA + + M+R PD++ F ++ C+Q G L S + + S Y
Sbjct: 460 AGYAMHGKAKEAMEIFDLMQRSGQKPDIISFTCVLSACSQSG-LTEEGSYYFNSMSSKYG 518
Query: 264 NEDPLDNL--LVSMYTKCGDLELA 285
E +++ +V++ ++ G LE A
Sbjct: 519 IEARVEHYACMVTLLSRAGKLEQA 542
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/250 (28%), Positives = 112/250 (44%), Gaps = 32/250 (12%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI + NG E L + M GV NS T P +L AC NI ++ GK H L+ G
Sbjct: 357 MIACCSQNGRDMEALELFREMQIAGVKPNSVTIPCLLPACGNIAALMHGKAAHCFSLRRG 416
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
D +V + LIDMY+KC +SR D +P +++V WN++I+ ++ EA+ +
Sbjct: 417 ISTDVYVGSALIDMYAKCGRIQASRICFDGIPT--KNLVCWNAVIAGYAMHGKAKEAMEI 474
Query: 121 LKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGK 180
M G + +F V+S CS + G++ Y SM +K+G
Sbjct: 475 FDLMQRSGQKPDIISFTCVLSACS-QSGLTEEGSYY--------------FNSMSSKYGI 519
Query: 181 VNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILG 240
EAR + + ++ G + +A+ + +RRM V PD V+ L+
Sbjct: 520 --EAR----------VEHYACMVTLLSRAGKLEQAYAM---IRRMPVNPDACVWGALLSS 564
Query: 241 CAQVGNLFLA 250
C N+ L
Sbjct: 565 CRVHNNVSLG 574
>gi|77552605|gb|ABA95402.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
Length = 1000
Score = 338 bits (867), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 193/625 (30%), Positives = 333/625 (53%), Gaps = 15/625 (2%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI ++ G + +S M G+ ++ T ++ CA+ + G +HS L+
Sbjct: 217 MISMYSHQGICSKCFLVFSDMRHHGLRPDATTLCSLMSVCASSDHFSHGSGIHSLCLRSS 276
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
V L++MYS + + M R ++SWN++IS++ + C + +A+
Sbjct: 277 LDSSVTVINALVNMYSAAGKLSDAEFLFWNMS--RRDLISWNTMISSYVQNCNSTDALKT 334
Query: 121 LKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
L +++ + TF S + CS G +H V +L L N + + NS+++MY
Sbjct: 335 LGQLFHTNESPNHLTFSSALGACSSPGALIDGKMVHAIVLQLSLQRN-LLVGNSLITMYG 393
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K + +A +F + IVS+ +IGGY + + +A + + MR + P+ + +N
Sbjct: 394 KCNSMEDAEKVFQSMPTHDIVSYNVLIGGYAVLEDGTKAMQVFSWMRSAGIKPNYITMIN 453
Query: 237 LILGCAQVGNLF-LALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEK 295
+ A +L +H+ ++++G+ +++ + N L++MY KCG+LE + +F+++ K
Sbjct: 454 IHGSFASSNDLHNYGRPLHAYIIRTGFLSDEYVANSLITMYAKCGNLESSTNIFNSITNK 513
Query: 296 SVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIE 355
++ W ++I QLG+ EA+ LF + + + LA LS+CA L SL +G ++
Sbjct: 514 NIVSWNAIIAANVQLGHGEEALKLFIDMQHAGNKLDRVCLAECLSSCASLASLEEGMQLH 573
Query: 356 EYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDL---AVWSAMINGYAIHG 412
+ +GL+S+ V + + M+ KCG+++ E+ + VPD+ + W+ +I+GYA +G
Sbjct: 574 GLGMKSGLDSDSYVVNAAMDMYGKCGKMD---EMLQVVPDQAIRPQQCWNTLISGYAKYG 630
Query: 413 MGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEH 472
+A F +M G KPD V + ++LSACSH+G+VD G+ ++ SM S+FG+ P I+H
Sbjct: 631 YFKEAEETFKQMV-ATGRKPDYVTFVALLSACSHAGLVDKGIDYYNSMASSFGVSPGIKH 689
Query: 473 YLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLN 532
+C+VDLLGR GRF A K I EMPV +W LLS+ H N+E+G AK LL L+
Sbjct: 690 CVCIVDLLGRLGRFAEAEKFIEEMPVLPNDLIWRSLLSSSRTHKNLEIGRKTAKKLLELD 749
Query: 533 PGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSH 592
P Y+L++NL+ + W + R M + K P S +++ V F GDR H
Sbjct: 750 PFDDSAYVLLSNLYATNARWADVDKLRSHMKTININKRPACSWLKLKNEVSTFGIGDRGH 809
Query: 593 HLSVDIRKTLKELHIKLLEAGYIAE 617
+ I L E+ +KL E GYIA+
Sbjct: 810 KHAEKIYAKLDEMLLKLREVGYIAD 834
Score = 220 bits (561), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 145/548 (26%), Positives = 265/548 (48%), Gaps = 13/548 (2%)
Query: 6 TNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDA 65
++NG EE L Y M + GV N+ F V+ C ++ + G +V S V+ G Q
Sbjct: 121 SSNGYLEEALRAYRQMRRDGVPCNANAFATVVSLCGSLENEVPGLQVASQVIVSGLQNQV 180
Query: 66 FVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMW 125
V LI M+ + K+ D M +SWN++IS +S + + LV +M
Sbjct: 181 SVANSLITMFGNLGRVHDAEKLFDRM--EEHDTISWNAMISMYSHQGICSKCFLVFSDMR 238
Query: 126 VLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGL---LNNEIPLANSVMSMYAKFGKVN 182
GL A+T S++S C+ S ++ L L L++ + + N++++MY+ GK++
Sbjct: 239 HHGLRPDATTLCSLMSVCASSDHFSHGSGIHSLCLRSSLDSSVTVINALVNMYSAAGKLS 298
Query: 183 EARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCA 242
+A +F + ++SW T+I YV N +A Q+ + +P+ + F + + C+
Sbjct: 299 DAEFLFWNMSRRDLISWNTMISSYVQNCNSTDALKTLGQLFHTNESPNHLTFSSALGACS 358
Query: 243 QVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTS 302
G L +H+++L+ + N L++MY KC +E A +VF ++ + +
Sbjct: 359 SPGALIDGKMVHAIVLQLSLQRNLLVGNSLITMYGKCNSMEDAEKVFQSMPTHDIVSYNV 418
Query: 303 MIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSK-GKEIEEYIVLN 361
+IGGYA L ++A+ +F + ++PN T+ + A L G+ + YI+
Sbjct: 419 LIGGYAVLEDGTKAMQVFSWMRSAGIKPNYITMINIHGSFASSNDLHNYGRPLHAYIIRT 478
Query: 362 GLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLF 421
G S+ V SLI M++KCG + + +F + +K++ W+A+I G G++AL LF
Sbjct: 479 GFLSDEYVANSLITMYAKCGNLESSTNIFNSITNKNIVSWNAIIAANVQLGHGEEALKLF 538
Query: 422 YKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFK-SMQSNFGIEPSIEHYLCLVDLL 480
MQH G K D V LS+C+ +++G+ M+S + + + +D+
Sbjct: 539 IDMQHA-GNKLDRVCLAECLSSCASLASLEEGMQLHGLGMKSGLDSDSYVVN--AAMDMY 595
Query: 481 GRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYI 540
G+ G+ D L+ + + + Q Q W L+S K+ + E K ++ G +Y+
Sbjct: 596 GKCGKMDEMLQVVPDQAIRPQ-QCWNTLISGYAKYGYFKEAEETFKQMVA--TGRKPDYV 652
Query: 541 LMANLFTS 548
L ++
Sbjct: 653 TFVALLSA 660
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 119/427 (27%), Positives = 217/427 (50%), Gaps = 11/427 (2%)
Query: 21 MLQTGVHGNSFTFPLVLKAC---ANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSK 77
M + GV + F ++ AC I G +H+ + G + ++ T L+ +Y
Sbjct: 32 MRERGVPLSGFALASLVTACERRGRDEGIACGAAIHALTHRAGLMGNVYIGTALLHLYGS 91
Query: 78 CSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFV 137
++++ EMP R +VVSW +++ A S +EA+ ++M G+ +A+ F
Sbjct: 92 RGIVSDAQRLFWEMPER--NVVSWTALMVALSSNGYLEEALRAYRQMRRDGVPCNANAFA 149
Query: 138 SVVSGCSFRQ----GISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGE 193
+VVS C + G+ + V GL N++ +ANS+++M+ G+V++A +FD + E
Sbjct: 150 TVVSLCGSLENEVPGLQVASQVIVSGL-QNQVSVANSLITMFGNLGRVHDAEKLFDRMEE 208
Query: 194 TSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSM 253
+SW +I Y + G ++ F + + MR + PD +L+ CA + +
Sbjct: 209 HDTISWNAMISMYSHQGICSKCFLVFSDMRHHGLRPDATTLCSLMSVCASSDHFSHGSGI 268
Query: 254 HSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYP 313
HSL L+S ++ + N LV+MY+ G L A +F + + + W +MI Y Q
Sbjct: 269 HSLCLRSSLDSSVTVINALVNMYSAAGKLSDAEFLFWNMSRRDLISWNTMISSYVQNCNS 328
Query: 314 SEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSL 373
++A+ +L T+ PN T ++ L AC+ G+L GK + ++ L+ N V SL
Sbjct: 329 TDALKTLGQLFHTNESPNHLTFSSALGACSSPGALIDGKMVHAIVLQLSLQRNLLVGNSL 388
Query: 374 IHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPD 433
I M+ KC + A++VF+ +P D+ ++ +I GYA+ G +A+ +F M+ G+KP+
Sbjct: 389 ITMYGKCNSMEDAEKVFQSMPTHDIVSYNVLIGGYAVLEDGTKAMQVFSWMRSA-GIKPN 447
Query: 434 AVVYTSI 440
+ +I
Sbjct: 448 YITMINI 454
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 108/415 (26%), Positives = 197/415 (47%), Gaps = 20/415 (4%)
Query: 96 RSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCSFRQ-------G 148
R+ +W + +S R + A +L+ M G+ LS S+V+ C R G
Sbjct: 4 RTPSTWYTAVSGCVRCGRDGTAFEMLRGMRERGVPLSGFALASLVTACERRGRDEGIACG 63
Query: 149 ISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVN 208
++H ++ GL+ N + + +++ +Y G V++A+ +F E+ E ++VSWT ++ +
Sbjct: 64 AAIHALTHRAGLMGN-VYIGTALLHLYGSRGIVSDAQRLFWEMPERNVVSWTALMVALSS 122
Query: 209 VGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPL 268
G + EA QMRR V + F ++ C + N L + S ++ SG N+ +
Sbjct: 123 NGYLEEALRAYRQMRRDGVPCNANAFATVVSLCGSLENEVPGLQVASQVIVSGLQNQVSV 182
Query: 269 DNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSV 328
N L++M+ G + A ++FD + E W +MI Y+ G S+ +F + +
Sbjct: 183 ANSLITMFGNLGRVHDAEKLFDRMEEHDTISWNAMISMYSHQGICSKCFLVFSDMRHHGL 242
Query: 329 RPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKE 388
RP+ TL + +S CA S G I + + L+S+ V +L++M+S G+++ A+
Sbjct: 243 RPDATTLCSLMSVCASSDHFSHGSGIHSLCLRSSLDSSVTVINALVNMYSAAGKLSDAEF 302
Query: 389 VFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSG 448
+F + +DL W+ MI+ Y + AL ++ H P+ + ++S L ACS G
Sbjct: 303 LFWNMSRRDLISWNTMISSYVQNCNSTDALKTLGQLFHTNE-SPNHLTFSSALGACSSPG 361
Query: 449 MVDDG-----LSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPV 498
+ DG + S+Q N + S L+ + G+ + A K MP
Sbjct: 362 ALIDGKMVHAIVLQLSLQRNLLVGNS------LITMYGKCNSMEDAEKVFQSMPT 410
>gi|356565918|ref|XP_003551183.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g25970-like [Glycine max]
Length = 703
Score = 338 bits (867), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 196/621 (31%), Positives = 336/621 (54%), Gaps = 15/621 (2%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+I ++G + T +M ++ +S TF +LK A + + G+++HS +LKVG
Sbjct: 65 IISAFASSGDLDTTWQLLGAMRRSTHAFDSRTFGSILKGVAYVGKLKLGQQLHSVMLKVG 124
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
++ F + L+DMY+KC V MP R + VSWN++++++SR D A V
Sbjct: 125 LSENVFSGSALLDMYAKCGRVDDGYVVFQSMPER--NYVSWNTLVASYSRVGDCDMAFWV 182
Query: 121 LKEMWVLGLELSASTFVSVVS----GCSFRQGISMHCCVYKLGL-LNNEIPLANSVMSMY 175
L M + G+E+ T +++ ++ + +HC + K GL L N + N+ ++ Y
Sbjct: 183 LSCMELEGVEIDDGTVSPLLTLLDNAMFYKLTMQLHCKIVKHGLELFNTV--CNATITAY 240
Query: 176 AKFGKVNEARSIFD-EIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVF 234
++ + +A +FD + +V+W +++G Y+ + AF + M+ PD +
Sbjct: 241 SECCSLQDAERVFDGAVLCRDLVTWNSMLGAYLMHEKEDLAFKVFLDMQNFGFEPDAYTY 300
Query: 235 LNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGD--LELARRVFDAV 292
++ C+ + +H L++K G +N P+ N L+SMY + D +E A R+F ++
Sbjct: 301 TGIVGACSVQEHKTCGKCLHGLVIKRGLDNSVPVSNALISMYIRFNDRCMEDALRIFFSM 360
Query: 293 LEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGK 352
K W S++ GY Q+G +A+ LF ++ + + T + + +C++L +L G+
Sbjct: 361 DLKDCCTWNSILAGYVQVGLSEDALRLFLQMRCLVIEIDHYTFSAVIRSCSDLATLQLGQ 420
Query: 353 EIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHG 412
+ + G ++N V +SLI M+SKCG I A++ FE + VW+++I GYA HG
Sbjct: 421 QFHVLALKVGFDTNSYVGSSLIFMYSKCGIIEDARKSFEATSKDNAIVWNSIIFGYAQHG 480
Query: 413 MGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEH 472
G+ AL+LFY M+ +K D + + ++L+ACSH+G+V++G +F +SM+S+FGI P EH
Sbjct: 481 QGNIALDLFYMMKE-RKVKLDHITFVAVLTACSHNGLVEEGCNFIESMESDFGIPPRQEH 539
Query: 473 YLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLN 532
Y C +DL GRAG A + MP E A V LL AC ++EL AK LL L
Sbjct: 540 YACAIDLYGRAGHLKKATALVETMPFEPDAMVLKTLLGACRFCGDIELASQIAKILLELE 599
Query: 533 PGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSH 592
P Y++++ ++ MW E A+ +M +R + K PGWS +E+ +V F A D SH
Sbjct: 600 PEEHCTYVILSEMYGRFKMWGEKASVTRMMRERGVKKVPGWSWIEVKNNVHAFNAEDHSH 659
Query: 593 HLSVDIRKTLKELH--IKLLE 611
+I L++L+ IKL +
Sbjct: 660 PQCEEIYILLQQLNEGIKLFD 680
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 113/415 (27%), Positives = 204/415 (49%), Gaps = 19/415 (4%)
Query: 53 HSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRAC 112
H +K+G D + LI Y+KC++ S+ +V DEMP R VSWN+IISA + +
Sbjct: 16 HCRAIKLGSIADPYTANNLITSYAKCTELNSAHQVFDEMP--HRDTVSWNAIISAFASSG 73
Query: 113 LNDEAILVLKEMWVLGLELSASTFVSVVSGCSF----RQGISMHCCVYKLGLLNNEIPLA 168
D +L M + TF S++ G ++ + G +H + K+GL N
Sbjct: 74 DLDTTWQLLGAMRRSTHAFDSRTFGSILKGVAYVGKLKLGQQLHSVMLKVGLSENVFS-G 132
Query: 169 NSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGL--CNQMRRMS 226
++++ MYAK G+V++ +F + E + VSW T++ Y VG+ + AF + C ++ +
Sbjct: 133 SALLDMYAKCGRVDDGYVVFQSMPERNYVSWNTLVASYSRVGDCDMAFWVLSCMELEGVE 192
Query: 227 VTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELAR 286
+ V L +L A L + +H ++K G + + N ++ Y++C L+ A
Sbjct: 193 IDDGTVSPLLTLLDNAMFYK--LTMQLHCKIVKHGLELFNTVCNATITAYSECCSLQDAE 250
Query: 287 RVFD-AVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAEL 345
RVFD AVL + + W SM+G Y A +F + P+ T + AC+
Sbjct: 251 RVFDGAVLCRDLVTWNSMLGAYLMHEKEDLAFKVFLDMQNFGFEPDAYTYTGIVGACSVQ 310
Query: 346 GSLSKGKEIEEYIVLNGLESNRQVQTSLIHMF----SKCGRINKAKEVFERVPDKDLAVW 401
+ GK + ++ GL+++ V +LI M+ +C + A +F + KD W
Sbjct: 311 EHKTCGKCLHGLVIKRGLDNSVPVSNALISMYIRFNDRC--MEDALRIFFSMDLKDCCTW 368
Query: 402 SAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSF 456
++++ GY G+ + AL LF +M+ + ++ D +++++ +CS + G F
Sbjct: 369 NSILAGYVQVGLSEDALRLFLQMRCLV-IEIDHYTFSAVIRSCSDLATLQLGQQF 422
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 89/298 (29%), Positives = 153/298 (51%), Gaps = 3/298 (1%)
Query: 149 ISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVN 208
I+ HC KLG + + AN++++ YAK ++N A +FDE+ VSW II + +
Sbjct: 13 IATHCRAIKLGSIADPYT-ANNLITSYAKCTELNSAHQVFDEMPHRDTVSWNAIISAFAS 71
Query: 209 VGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPL 268
G+++ + L MRR + D F +++ G A VG L L +HS++LK G +
Sbjct: 72 SGDLDTTWQLLGAMRRSTHAFDSRTFGSILKGVAYVGKLKLGQQLHSVMLKVGLSENVFS 131
Query: 269 DNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSV 328
+ L+ MY KCG ++ VF ++ E++ W +++ Y+++G A + + V
Sbjct: 132 GSALLDMYAKCGRVDDGYVVFQSMPERNYVSWNTLVASYSRVGDCDMAFWVLSCMELEGV 191
Query: 329 RPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKE 388
++ T++ L+ ++ IV +GLE V + I +S+C + A+
Sbjct: 192 EIDDGTVSPLLTLLDNAMFYKLTMQLHCKIVKHGLELFNTVCNATITAYSECCSLQDAER 251
Query: 389 VFE-RVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACS 445
VF+ V +DL W++M+ Y +H D A +F MQ+ G +PDA YT I+ ACS
Sbjct: 252 VFDGAVLCRDLVTWNSMLGAYLMHEKEDLAFKVFLDMQNF-GFEPDAYTYTGIVGACS 308
>gi|147765322|emb|CAN64903.1| hypothetical protein VITISV_019802 [Vitis vinifera]
Length = 625
Score = 338 bits (866), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 200/578 (34%), Positives = 321/578 (55%), Gaps = 20/578 (3%)
Query: 50 KRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHS 109
++ HS +L +G Q++F+ T LI Y+ C SR V D + + ++V WNS+I+
Sbjct: 43 RQSHSRILSLGLSQNSFLATKLIFAYAICQHPYHSRLVFDSL--QHKNVFLWNSLINGCV 100
Query: 110 RACLNDEAILVLKEMW---VLGLELSASTFVSVVS--GCSFRQGISMHCCVYKLGLLNNE 164
+ L +EA + +M VL + + ST V S G F G S+H + G +++
Sbjct: 101 KNRLYNEAFQLFNQMCSSDVLPDDFTLSTLSKVSSELGALF-SGKSIHGKSIRTGFVSDT 159
Query: 165 IPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVN---EAFGLCNQ 221
+ +ANS+MSMY K G +E+R +FDE+ + SW +I GY GN N E + Q
Sbjct: 160 V-VANSIMSMYCKCGNFDESRKVFDEMTIRNSGSWNVLIAGYAVSGNCNFREETWEFVKQ 218
Query: 222 MRRMSVTPDLVVFLNLILGC-AQVGNLFLALSMHSLLLKS----GYNNEDPLDNLLVSMY 276
M+ V PD +L+ C +G +H ++K+ G +++ L L+ MY
Sbjct: 219 MQMDEVRPDAYTISSLLPLCDGDMGKWDYGRELHCYIVKNELVLGLDSDVHLGCCLIDMY 278
Query: 277 TKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRL-LKTSVRPNEATL 335
++ + + RRVFD + ++VF WT+MI GY + G EA++LF+ + + V PN +L
Sbjct: 279 SRSNKVVVGRRVFDRMKCRNVFSWTAMINGYVENGDSDEALSLFRDMQVIDGVEPNRVSL 338
Query: 336 ATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVP- 394
+ L AC+ L G++I + V L + + +LI M+SKCG ++ A+ VFE
Sbjct: 339 VSVLPACSSFSGLLSGRQIHGFAVRKELNNEVSLCNALIDMYSKCGSLDSARRVFEDDSL 398
Query: 395 DKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGL 454
KD WS+MI+GY +HG G +A+ L+ KM G++PD + ILSAC SG+V++GL
Sbjct: 399 CKDAISWSSMISGYGLHGKGQEAILLYDKMLQA-GIRPDMITTVGILSACGRSGLVNEGL 457
Query: 455 SFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMK 514
+ + S+ +++GIEP++E C+VD+LGRAG+ D AL I +PVE VW L+S +
Sbjct: 458 NIYSSVINDYGIEPTLEICACIVDMLGRAGQLDRALDFIKAIPVEPGPSVWGALVSCSII 517
Query: 515 HHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWS 574
H ++E+ E A + L+ L P + NY+ ++NL+ S+ W A R +M D+RL K PG S
Sbjct: 518 HGDLEMQELAYRFLIQLEPKNPSNYVSISNLYASSRRWDAVAEVRRMMKDKRLRKVPGCS 577
Query: 575 QVEIDGSVQVFVAGDRSHHLSVDIRKTLKELHIKLLEA 612
+ I+ F D++H S I L +L + + +A
Sbjct: 578 WISINNKTHCFYVADKAHPSSTSIYNMLDDLLLTMNDA 615
Score = 207 bits (527), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 133/461 (28%), Positives = 231/461 (50%), Gaps = 17/461 (3%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+I N + E ++ M + V + FT + K + + +++ GK +H ++ G
Sbjct: 95 LINGCVKNRLYNEAFQLFNQMCSSDVLPDDFTLSTLSKVSSELGALFSGKSIHGKSIRTG 154
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAH--SRAC-LNDEA 117
F D V ++ MY KC +F SRKV DEM + R+ SWN +I+ + S C +E
Sbjct: 155 FVSDTVVANSIMSMYCKCGNFDESRKVFDEMTI--RNSGSWNVLIAGYAVSGNCNFREET 212
Query: 118 ILVLKEMWVLGLELSASTFVSVVSGCS-----FRQGISMHCCVYKLGL---LNNEIPLAN 169
+K+M + + A T S++ C + G +HC + K L L++++ L
Sbjct: 213 WEFVKQMQMDEVRPDAYTISSLLPLCDGDMGKWDYGRELHCYIVKNELVLGLDSDVHLGC 272
Query: 170 SVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMS-VT 228
++ MY++ KV R +FD + ++ SWT +I GYV G+ +EA L M+ + V
Sbjct: 273 CLIDMYSRSNKVVVGRRVFDRMKCRNVFSWTAMINGYVENGDSDEALSLFRDMQVIDGVE 332
Query: 229 PDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRV 288
P+ V ++++ C+ L +H ++ NNE L N L+ MY+KCG L+ ARRV
Sbjct: 333 PNRVSLVSVLPACSSFSGLLSGRQIHGFAVRKELNNEVSLCNALIDMYSKCGSLDSARRV 392
Query: 289 F-DAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGS 347
F D L K W+SMI GY G EA+ L+ ++L+ +RP+ T LSAC G
Sbjct: 393 FEDDSLCKDAISWSSMISGYGLHGKGQEAILLYDKMLQAGIRPDMITTVGILSACGRSGL 452
Query: 348 LSKGKEIEEYIVLN-GLESNRQVQTSLIHMFSKCGRINKAKEVFERVP-DKDLAVWSAMI 405
+++G I ++ + G+E ++ ++ M + G++++A + + +P + +VW A++
Sbjct: 453 VNEGLNIYSSVINDYGIEPTLEICACIVDMLGRAGQLDRALDFIKAIPVEPGPSVWGALV 512
Query: 406 NGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSH 446
+ IHG + + + +E P V S L A S
Sbjct: 513 SCSIIHGDLEMQELAYRFLIQLEPKNPSNYVSISNLYASSR 553
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 72/257 (28%), Positives = 126/257 (49%), Gaps = 6/257 (2%)
Query: 246 NLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIG 305
+L L HS +L G + L L+ Y C +R VFD++ K+VFLW S+I
Sbjct: 38 SLKLTRQSHSRILSLGLSQNSFLATKLIFAYAICQHPYHSRLVFDSLQHKNVFLWNSLIN 97
Query: 306 GYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLES 365
G + +EA LF ++ + V P++ TL+T +ELG+L GK I + G S
Sbjct: 98 GCVKNRLYNEAFQLFNQMCSSDVLPDDFTLSTLSKVSSELGALFSGKSIHGKSIRTGFVS 157
Query: 366 NRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGD--QALNLFYK 423
+ V S++ M+ KCG +++++VF+ + ++ W+ +I GYA+ G + + F K
Sbjct: 158 DTVVANSIMSMYCKCGNFDESRKVFDEMTIRNSGSWNVLIAGYAVSGNCNFREETWEFVK 217
Query: 424 MQHVEGLKPDAVVYTSILSACSHS-GMVDDGLSFFKSMQSN---FGIEPSIEHYLCLVDL 479
++ ++PDA +S+L C G D G + N G++ + CL+D+
Sbjct: 218 QMQMDEVRPDAYTISSLLPLCDGDMGKWDYGRELHCYIVKNELVLGLDSDVHLGCCLIDM 277
Query: 480 LGRAGRFDLALKTIHEM 496
R+ + + + M
Sbjct: 278 YSRSNKVVVGRRVFDRM 294
>gi|449480326|ref|XP_004155862.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g03580-like [Cucumis sativus]
Length = 939
Score = 338 bits (866), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 188/620 (30%), Positives = 324/620 (52%), Gaps = 8/620 (1%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+I +NG +E+ L Y TG+ + FT VL AC ++ ++ +G VH + K+G
Sbjct: 193 LISGYCSNGFWEDALDMYHKFRMTGMVPDCFTMSSVLLACGSLMAVKEGVAVHGVIEKIG 252
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
D + GL+ MY K +R+V +M V+ V+WN++I +++ ++ ++ +
Sbjct: 253 IAGDVIIGNGLLSMYFKFERLREARRVFSKMAVK--DSVTWNTMICGYAQLGRHEASVKL 310
Query: 121 LKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGL---LNNEIPLANSVMSMYAK 177
+M + G + S + C + + V+K + + N ++ MYAK
Sbjct: 311 FMDM-IDGFVPDMLSITSTIRACGQSGDLQVGKFVHKYLIGSGFECDTVACNILIDMYAK 369
Query: 178 FGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNL 237
G + A+ +FD V+W ++I GY G E +M +M PD V F+ L
Sbjct: 370 CGDLLAAQEVFDTTKCKDSVTWNSLINGYTQSGYYKEGLE-SFKMMKMERKPDSVTFVLL 428
Query: 238 ILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSV 297
+ +Q+ ++ +H ++K G+ E + N L+ +Y KCG+++ +VF + +
Sbjct: 429 LSIFSQLADINQGRGIHCDVIKFGFEAELIIGNSLLDVYAKCGEMDDLLKVFSYMSAHDI 488
Query: 298 FLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEY 357
W ++I + + + + P+EAT+ L C+ L +GKEI Y
Sbjct: 489 ISWNTVIASSVHFDDCTVGFQMINEMRTEGLMPDEATVLGILPMCSLLAVRRQGKEIHGY 548
Query: 358 IVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQA 417
I +G ESN + +LI M+SKCG + +VF+ + +KD+ W+A+I+ + ++G G +A
Sbjct: 549 IFKSGFESNVPIGNALIEMYSKCGSLENCIKVFKYMKEKDVVTWTALISAFGMYGEGKKA 608
Query: 418 LNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLV 477
L F M+ + G+ PD+V + + + ACSHSGMV +GL FF M++++ +EP +EHY C+V
Sbjct: 609 LKAFQDME-LSGVLPDSVAFIAFIFACSHSGMVKEGLRFFDRMKTDYNLEPRMEHYACVV 667
Query: 478 DLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTG 537
DLL R+G A + I MP++ A +W LLSAC N + + +K +L LN TG
Sbjct: 668 DLLARSGLLAQAEEFILSMPMKPDASLWGALLSACRARGNTNIAQRVSKKILELNSDDTG 727
Query: 538 NYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVD 597
Y+L++N++ + G W + T R M + L KEPG S +EI V VF GD+S
Sbjct: 728 YYVLVSNIYATLGKWDQVKTVRNSMKTKGLKKEPGSSWIEIQKRVYVFRTGDKSFEQYDK 787
Query: 598 IRKTLKELHIKLLEAGYIAE 617
++ L+ L + + GY+A+
Sbjct: 788 VKDLLEYLVRLMAKEGYVAD 807
Score = 243 bits (621), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 157/523 (30%), Positives = 263/523 (50%), Gaps = 28/523 (5%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+IR T+NG F + L Y+ M + + ++FTFP V+ +CA I + G VH H +++G
Sbjct: 92 IIRALTHNGLFTQALGYYTEMREKKLQPDAFTFPSVINSCARILDLELGCIVHEHAMEMG 151
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F+ D ++ LIDMYS+ D ++R V +EM R VSWNS+IS + ++A+ +
Sbjct: 152 FESDLYIGNALIDMYSRFVDLDNARYVFEEMSN--RDSVSWNSLISGYCSNGFWEDALDM 209
Query: 121 LKEMWVLGLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
+ + G+ T SV+ C + ++G+++H + K+G+ + I + N ++SMY
Sbjct: 210 YHKFRMTGMVPDCFTMSSVLLACGSLMAVKEGVAVHGVIEKIGIAGDVI-IGNGLLSMYF 268
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
KF ++ EAR +F ++ V+W T+I GY +G + L M PD++ +
Sbjct: 269 KFERLREARRVFSKMAVKDSVTWNTMICGYAQLGRHEASVKLFMDMID-GFVPDMLSITS 327
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
I C Q G+L + +H L+ SG+ + N+L+ MY KCGDL A+ VFD K
Sbjct: 328 TIRACGQSGDLQVGKFVHKYLIGSGFECDTVACNILIDMYAKCGDLLAAQEVFDTTKCKD 387
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEE 356
W S+I GY Q GY E + FK ++K +P+ T LS ++L +++G+ I
Sbjct: 388 SVTWNSLINGYTQSGYYKEGLESFK-MMKMERKPDSVTFVLLLSIFSQLADINQGRGIHC 446
Query: 357 YIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIH----G 412
++ G E+ + SL+ +++KCG ++ +VF + D+ W+ +I ++H
Sbjct: 447 DVIKFGFEAELIIGNSLLDVYAKCGEMDDLLKVFSYMSAHDIISWNTVI-ASSVHFDDCT 505
Query: 413 MGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLS----FFKSMQSNFGIEP 468
+G Q +N EGL PD IL CS + G FKS G E
Sbjct: 506 VGFQMIN----EMRTEGLMPDEATVLGILPMCSLLAVRRQGKEIHGYIFKS-----GFES 556
Query: 469 SIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSA 511
++ L+++ + G + +K M E W L+SA
Sbjct: 557 NVPIGNALIEMYSKCGSLENCIKVFKYMK-EKDVVTWTALISA 598
Score = 199 bits (507), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 135/464 (29%), Positives = 231/464 (49%), Gaps = 8/464 (1%)
Query: 36 VLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRL 95
+LK ++ + + VHS ++ G LI Y++ D +SS V +
Sbjct: 25 LLKTLSSAKNTPQLRTVHSLIITSGLSLSVIFSGKLISKYAQVKDPISSVSVFRSIS-PT 83
Query: 96 RSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCV 155
+V WNSII A + L +A+ EM L+ A TF SV++ C+ + + C V
Sbjct: 84 NNVYLWNSIIRALTHNGLFTQALGYYTEMREKKLQPDAFTFPSVINSCARILDLELGCIV 143
Query: 156 YKLGL---LNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNV 212
++ + +++ + N+++ MY++F ++ AR +F+E+ VSW ++I GY + G
Sbjct: 144 HEHAMEMGFESDLYIGNALIDMYSRFVDLDNARYVFEEMSNRDSVSWNSLISGYCSNGFW 203
Query: 213 NEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLL 272
+A + ++ R + PD +++L C + + +++H ++ K G + + N L
Sbjct: 204 EDALDMYHKFRMTGMVPDCFTMSSVLLACGSLMAVKEGVAVHGVIEKIGIAGDVIIGNGL 263
Query: 273 VSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNE 332
+SMY K L ARRVF + K W +MI GYAQLG +V LF ++ V P+
Sbjct: 264 LSMYFKFERLREARRVFSKMAVKDSVTWNTMICGYAQLGRHEASVKLFMDMIDGFV-PDM 322
Query: 333 ATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFER 392
++ +T+ AC + G L GK + +Y++ +G E + LI M++KCG + A+EVF+
Sbjct: 323 LSITSTIRACGQSGDLQVGKFVHKYLIGSGFECDTVACNILIDMYAKCGDLLAAQEVFDT 382
Query: 393 VPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDD 452
KD W+++INGY G + L F KM +E KPD+V + +LS S ++
Sbjct: 383 TKCKDSVTWNSLINGYTQSGYYKEGLESF-KMMKMER-KPDSVTFVLLLSIFSQLADINQ 440
Query: 453 GLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEM 496
G + FG E + L+D+ + G D LK M
Sbjct: 441 GRGIHCDV-IKFGFEAELIIGNSLLDVYAKCGEMDDLLKVFSYM 483
Score = 141 bits (356), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 96/388 (24%), Positives = 186/388 (47%), Gaps = 5/388 (1%)
Query: 161 LNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETS-IVSWTTIIGGYVNVGNVNEAFGLC 219
L+ + + ++S YA+ + S+F I T+ + W +II + G +A G
Sbjct: 50 LSLSVIFSGKLISKYAQVKDPISSVSVFRSISPTNNVYLWNSIIRALTHNGLFTQALGYY 109
Query: 220 NQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKC 279
+MR + PD F ++I CA++ +L L +H ++ G+ ++ + N L+ MY++
Sbjct: 110 TEMREKKLQPDAFTFPSVINSCARILDLELGCIVHEHAMEMGFESDLYIGNALIDMYSRF 169
Query: 280 GDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTL 339
DL+ AR VF+ + + W S+I GY G+ +A++++ + T + P+ T+++ L
Sbjct: 170 VDLDNARYVFEEMSNRDSVSWNSLISGYCSNGFWEDALDMYHKFRMTGMVPDCFTMSSVL 229
Query: 340 SACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLA 399
AC L ++ +G + I G+ + + L+ M+ K R+ +A+ VF ++ KD
Sbjct: 230 LACGSLMAVKEGVAVHGVIEKIGIAGDVIIGNGLLSMYFKFERLREARRVFSKMAVKDSV 289
Query: 400 VWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKS 459
W+ MI GYA G + ++ LF M ++G PD + TS + AC SG + G F
Sbjct: 290 TWNTMICGYAQLGRHEASVKLF--MDMIDGFVPDMLSITSTIRACGQSGDLQVG-KFVHK 346
Query: 460 MQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVE 519
G E L+D+ + G LA + + + + W L++ + +
Sbjct: 347 YLIGSGFECDTVACNILIDMYAKCGDL-LAAQEVFDTTKCKDSVTWNSLINGYTQSGYYK 405
Query: 520 LGEYAAKNLLTLNPGSTGNYILMANLFT 547
G + K + + ++L+ ++F+
Sbjct: 406 EGLESFKMMKMERKPDSVTFVLLLSIFS 433
>gi|222616424|gb|EEE52556.1| hypothetical protein OsJ_34807 [Oryza sativa Japonica Group]
Length = 1215
Score = 338 bits (866), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 193/625 (30%), Positives = 333/625 (53%), Gaps = 15/625 (2%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI ++ G + +S M G+ ++ T ++ CA+ + G +HS L+
Sbjct: 519 MISMYSHQGICSKCFLVFSDMRHHGLRPDATTLCSLMSVCASSDHFSHGSGIHSLCLRSS 578
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
V L++MYS + + M R ++SWN++IS++ + C + +A+
Sbjct: 579 LDSSVTVINALVNMYSAAGKLSDAEFLFWNMS--RRDLISWNTMISSYVQNCNSTDALKT 636
Query: 121 LKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
L +++ + TF S + CS G +H V +L L N + + NS+++MY
Sbjct: 637 LGQLFHTNESPNHLTFSSALGACSSPGALIDGKMVHAIVLQLSLQRN-LLVGNSLITMYG 695
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K + +A +F + IVS+ +IGGY + + +A + + MR + P+ + +N
Sbjct: 696 KCNSMEDAEKVFQSMPTHDIVSYNVLIGGYAVLEDGTKAMQVFSWMRSAGIKPNYITMIN 755
Query: 237 LILGCAQVGNLF-LALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEK 295
+ A +L +H+ ++++G+ +++ + N L++MY KCG+LE + +F+++ K
Sbjct: 756 IHGSFASSNDLHNYGRPLHAYIIRTGFLSDEYVANSLITMYAKCGNLESSTNIFNSITNK 815
Query: 296 SVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIE 355
++ W ++I QLG+ EA+ LF + + + LA LS+CA L SL +G ++
Sbjct: 816 NIVSWNAIIAANVQLGHGEEALKLFIDMQHAGNKLDRVCLAECLSSCASLASLEEGMQLH 875
Query: 356 EYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDL---AVWSAMINGYAIHG 412
+ +GL+S+ V + + M+ KCG+++ E+ + VPD+ + W+ +I+GYA +G
Sbjct: 876 GLGMKSGLDSDSYVVNAAMDMYGKCGKMD---EMLQVVPDQAIRPQQCWNTLISGYAKYG 932
Query: 413 MGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEH 472
+A F +M G KPD V + ++LSACSH+G+VD G+ ++ SM S+FG+ P I+H
Sbjct: 933 YFKEAEETFKQMV-ATGRKPDYVTFVALLSACSHAGLVDKGIDYYNSMASSFGVSPGIKH 991
Query: 473 YLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLN 532
+C+VDLLGR GRF A K I EMPV +W LLS+ H N+E+G AK LL L+
Sbjct: 992 CVCIVDLLGRLGRFAEAEKFIEEMPVLPNDLIWRSLLSSSRTHKNLEIGRKTAKKLLELD 1051
Query: 533 PGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSH 592
P Y+L++NL+ + W + R M + K P S +++ V F GDR H
Sbjct: 1052 PFDDSAYVLLSNLYATNARWADVDKLRSHMKTININKRPACSWLKLKNEVSTFGIGDRGH 1111
Query: 593 HLSVDIRKTLKELHIKLLEAGYIAE 617
+ I L E+ +KL E GYIA+
Sbjct: 1112 KHAEKIYAKLDEMLLKLREVGYIAD 1136
Score = 220 bits (560), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 145/548 (26%), Positives = 265/548 (48%), Gaps = 13/548 (2%)
Query: 6 TNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDA 65
++NG EE L Y M + GV N+ F V+ C ++ + G +V S V+ G Q
Sbjct: 423 SSNGYLEEALRAYRQMRRDGVPCNANAFATVVSLCGSLENEVPGLQVASQVIVSGLQNQV 482
Query: 66 FVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMW 125
V LI M+ + K+ D M +SWN++IS +S + + LV +M
Sbjct: 483 SVANSLITMFGNLGRVHDAEKLFDRM--EEHDTISWNAMISMYSHQGICSKCFLVFSDMR 540
Query: 126 VLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGL---LNNEIPLANSVMSMYAKFGKVN 182
GL A+T S++S C+ S ++ L L L++ + + N++++MY+ GK++
Sbjct: 541 HHGLRPDATTLCSLMSVCASSDHFSHGSGIHSLCLRSSLDSSVTVINALVNMYSAAGKLS 600
Query: 183 EARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCA 242
+A +F + ++SW T+I YV N +A Q+ + +P+ + F + + C+
Sbjct: 601 DAEFLFWNMSRRDLISWNTMISSYVQNCNSTDALKTLGQLFHTNESPNHLTFSSALGACS 660
Query: 243 QVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTS 302
G L +H+++L+ + N L++MY KC +E A +VF ++ + +
Sbjct: 661 SPGALIDGKMVHAIVLQLSLQRNLLVGNSLITMYGKCNSMEDAEKVFQSMPTHDIVSYNV 720
Query: 303 MIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSK-GKEIEEYIVLN 361
+IGGYA L ++A+ +F + ++PN T+ + A L G+ + YI+
Sbjct: 721 LIGGYAVLEDGTKAMQVFSWMRSAGIKPNYITMINIHGSFASSNDLHNYGRPLHAYIIRT 780
Query: 362 GLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLF 421
G S+ V SLI M++KCG + + +F + +K++ W+A+I G G++AL LF
Sbjct: 781 GFLSDEYVANSLITMYAKCGNLESSTNIFNSITNKNIVSWNAIIAANVQLGHGEEALKLF 840
Query: 422 YKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFK-SMQSNFGIEPSIEHYLCLVDLL 480
MQH G K D V LS+C+ +++G+ M+S + + + +D+
Sbjct: 841 IDMQHA-GNKLDRVCLAECLSSCASLASLEEGMQLHGLGMKSGLDSDSYVVN--AAMDMY 897
Query: 481 GRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYI 540
G+ G+ D L+ + + + Q Q W L+S K+ + E K ++ G +Y+
Sbjct: 898 GKCGKMDEMLQVVPDQAIRPQ-QCWNTLISGYAKYGYFKEAEETFKQMVA--TGRKPDYV 954
Query: 541 LMANLFTS 548
L ++
Sbjct: 955 TFVALLSA 962
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 121/439 (27%), Positives = 220/439 (50%), Gaps = 11/439 (2%)
Query: 9 GSFEETLSTYSSMLQTGVHGNSFTFPLVLKAC---ANINSIWDGKRVHSHVLKVGFQQDA 65
GS + M + GV + F ++ AC I G +H+ + G +
Sbjct: 322 GSHGKAFEMLRGMREPGVPLSGFALASLVTACERRGRDEGIACGAAIHALTHRAGLMGNV 381
Query: 66 FVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMW 125
++ T L+ +Y ++++ EMP R +VVSW +++ A S +EA+ ++M
Sbjct: 382 YIGTALLHLYGSRGIVSDAQRLFWEMPER--NVVSWTALMVALSSNGYLEEALRAYRQMR 439
Query: 126 VLGLELSASTFVSVVSGCSFRQ----GISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKV 181
G+ +A+ F +VVS C + G+ + V GL N++ +ANS+++M+ G+V
Sbjct: 440 RDGVPCNANAFATVVSLCGSLENEVPGLQVASQVIVSGL-QNQVSVANSLITMFGNLGRV 498
Query: 182 NEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGC 241
++A +FD + E +SW +I Y + G ++ F + + MR + PD +L+ C
Sbjct: 499 HDAEKLFDRMEEHDTISWNAMISMYSHQGICSKCFLVFSDMRHHGLRPDATTLCSLMSVC 558
Query: 242 AQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWT 301
A + +HSL L+S ++ + N LV+MY+ G L A +F + + + W
Sbjct: 559 ASSDHFSHGSGIHSLCLRSSLDSSVTVINALVNMYSAAGKLSDAEFLFWNMSRRDLISWN 618
Query: 302 SMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLN 361
+MI Y Q ++A+ +L T+ PN T ++ L AC+ G+L GK + ++
Sbjct: 619 TMISSYVQNCNSTDALKTLGQLFHTNESPNHLTFSSALGACSSPGALIDGKMVHAIVLQL 678
Query: 362 GLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLF 421
L+ N V SLI M+ KC + A++VF+ +P D+ ++ +I GYA+ G +A+ +F
Sbjct: 679 SLQRNLLVGNSLITMYGKCNSMEDAEKVFQSMPTHDIVSYNVLIGGYAVLEDGTKAMQVF 738
Query: 422 YKMQHVEGLKPDAVVYTSI 440
M+ G+KP+ + +I
Sbjct: 739 SWMRSA-GIKPNYITMINI 756
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 119/463 (25%), Positives = 217/463 (46%), Gaps = 25/463 (5%)
Query: 52 VHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVL---DEMPVRLRSVVSWNSIISAH 108
+H +++ AF + L+ Y + D ++ L DEM R S +W + +S
Sbjct: 261 IHGLAVRLALPLSAFHRNTLLAFYFRQRDASAAAAALHLFDEMADRTPS--TWYTAVSGC 318
Query: 109 SRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCSFRQ-------GISMHCCVYKLGLL 161
R + +A +L+ M G+ LS S+V+ C R G ++H ++ GL+
Sbjct: 319 VRCGSHGKAFEMLRGMREPGVPLSGFALASLVTACERRGRDEGIACGAAIHALTHRAGLM 378
Query: 162 NNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQ 221
N + + +++ +Y G V++A+ +F E+ E ++VSWT ++ + G + EA Q
Sbjct: 379 GN-VYIGTALLHLYGSRGIVSDAQRLFWEMPERNVVSWTALMVALSSNGYLEEALRAYRQ 437
Query: 222 MRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGD 281
MRR V + F ++ C + N L + S ++ SG N+ + N L++M+ G
Sbjct: 438 MRRDGVPCNANAFATVVSLCGSLENEVPGLQVASQVIVSGLQNQVSVANSLITMFGNLGR 497
Query: 282 LELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSA 341
+ A ++FD + E W +MI Y+ G S+ +F + +RP+ TL + +S
Sbjct: 498 VHDAEKLFDRMEEHDTISWNAMISMYSHQGICSKCFLVFSDMRHHGLRPDATTLCSLMSV 557
Query: 342 CAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVW 401
CA S G I + + L+S+ V +L++M+S G+++ A+ +F + +DL W
Sbjct: 558 CASSDHFSHGSGIHSLCLRSSLDSSVTVINALVNMYSAAGKLSDAEFLFWNMSRRDLISW 617
Query: 402 SAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDG-----LSF 456
+ MI+ Y + AL ++ H P+ + ++S L ACS G + DG +
Sbjct: 618 NTMISSYVQNCNSTDALKTLGQLFHTNE-SPNHLTFSSALGACSSPGALIDGKMVHAIVL 676
Query: 457 FKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVE 499
S+Q N + S L+ + G+ + A K MP
Sbjct: 677 QLSLQRNLLVGNS------LITMYGKCNSMEDAEKVFQSMPTH 713
>gi|147866113|emb|CAN78822.1| hypothetical protein VITISV_006669 [Vitis vinifera]
Length = 599
Score = 338 bits (866), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 198/573 (34%), Positives = 306/573 (53%), Gaps = 27/573 (4%)
Query: 60 GFQQDAFVQTGLIDM--YSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEA 117
G +D F + LI S+ D +L R + SWN I + EA
Sbjct: 5 GLIEDGFASSRLIAFCAISEWRDLDYCTNIL--FNTRNPNTFSWNVAIRGFLDSENPREA 62
Query: 118 ILVLKE-MWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVM 172
+++ K + G + T+ + C+ R G + V LG +++I ++N+V+
Sbjct: 63 VVLYKRVLQCDGTKPDNYTYPLLFKACARLSLIRMGSEILGHVLHLGF-DSDIFVSNAVI 121
Query: 173 SMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLV 232
+ G ++ AR +FD+ +VSW ++I GYV G EA +M+ + PD V
Sbjct: 122 HLLVSCGDLDGARKMFDKSCVRDLVSWNSMINGYVRRGWAYEALNFYREMKVEGIKPDEV 181
Query: 233 VFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAV 292
+ ++ CAQ+ +L L H + ++G PL N L+ MY KCG+LE AR++FD++
Sbjct: 182 TMIGVVSSCAQLEDLDLGRESHCYIEENGLKLTVPLANALMDMYMKCGNLESARKLFDSM 241
Query: 293 LEKSVFLWTSM----------------IGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLA 336
K++ WT+M IGGY EA+ LF + ++ P+E T+
Sbjct: 242 TNKTMVSWTTMLFDEMPDKDVVPWNAMIGGYVHANRGKEALALFNEMQAMNINPDEVTMV 301
Query: 337 TTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDK 396
+ LSAC++LG+L G I YI + L N + T+LI M++KCG+I KA +VF+ +P +
Sbjct: 302 SCLSACSQLGALDVGIWIHHYIEKHELSLNVALGTALIDMYAKCGKITKAIQVFQELPGR 361
Query: 397 DLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSF 456
+ W+A+I+G A+HG A+ F +M + PD V + +LSAC H G+V++G +
Sbjct: 362 NSLTWTAIISGLALHGNAHGAIAYFSEMID-NSVMPDEVTFLGLLSACCHGGLVEEGRKY 420
Query: 457 FKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHH 516
F M S F + P ++HY C+VDLLGRAG + A + I MP+E A VW L AC H
Sbjct: 421 FSQMSSKFNLSPKLKHYSCMVDLLGRAGLLEEAEELIKSMPIEADAVVWGALFFACRIHG 480
Query: 517 NVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQV 576
NV +GE AA LL ++P +G Y+L+AN++ A MWKEA R LM R + K PG S +
Sbjct: 481 NVLMGERAASKLLQMDPHDSGIYVLLANMYGEAEMWKEAGKXRKLMRQRGVEKTPGCSSI 540
Query: 577 EIDGSVQVFVAGDRSHHLSVDIRKTLKELHIKL 609
E++G V F+ D+SH S I + L +L +L
Sbjct: 541 EVNGIVYEFIVRDKSHPQSEQIYECLIQLTRQL 573
Score = 218 bits (555), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 139/456 (30%), Positives = 233/456 (51%), Gaps = 30/456 (6%)
Query: 2 IRNSTNNGSFEETLSTYSSMLQT-GVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
IR ++ + E + Y +LQ G +++T+PL+ KACA ++ I G + HVL +G
Sbjct: 50 IRGFLDSENPREAVVLYKRVLQCDGTKPDNYTYPLLFKACARLSLIRMGSEILGHVLHLG 109
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F D FV +I + C D +RK+ D+ V R +VSWNS+I+ + R EA+
Sbjct: 110 FDSDIFVSNAVIHLLVSCGDLDGARKMFDKSCV--RDLVSWNSMINGYVRRGWAYEALNF 167
Query: 121 LKEMWVLGLELSASTFVSVVSGCSFRQGISM----HCCVYKLGLLNNEIPLANSVMSMYA 176
+EM V G++ T + VVS C+ + + + HC + + G L +PLAN++M MY
Sbjct: 168 YREMKVEGIKPDEVTMIGVVSSCAQLEDLDLGRESHCYIEENG-LKLTVPLANALMDMYM 226
Query: 177 KFGKVNEARSIFDEIGETSIVSWTT----------------IIGGYVNVGNVNEAFGLCN 220
K G + AR +FD + ++VSWTT +IGGYV+ EA L N
Sbjct: 227 KCGNLESARKLFDSMTNKTMVSWTTMLFDEMPDKDVVPWNAMIGGYVHANRGKEALALFN 286
Query: 221 QMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCG 280
+M+ M++ PD V ++ + C+Q+G L + + +H + K + L L+ MY KCG
Sbjct: 287 EMQAMNINPDEVTMVSCLSACSQLGALDVGIWIHHYIEKHELSLNVALGTALIDMYAKCG 346
Query: 281 DLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLS 340
+ A +VF + ++ WT++I G A G A+ F ++ SV P+E T LS
Sbjct: 347 KITKAIQVFQELPGRNSLTWTAIISGLALHGNAHGAIAYFSEMIDNSVMPDEVTFLGLLS 406
Query: 341 ACAELGSLSKGKE-IEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVP-DKDL 398
AC G + +G++ + L + + ++ + + G + +A+E+ + +P + D
Sbjct: 407 ACCHGGLVEEGRKYFSQMSSKFNLSPKLKHYSCMVDLLGRAGLLEEAEELIKSMPIEADA 466
Query: 399 AVWSAMINGYAIHG---MGDQALNLFYKMQ-HVEGL 430
VW A+ IHG MG++A + +M H G+
Sbjct: 467 VVWGALFFACRIHGNVLMGERAASKLLQMDPHDSGI 502
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 88/325 (27%), Positives = 146/325 (44%), Gaps = 23/325 (7%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI G E L+ Y M G+ + T V+ +CA + + G+ H ++ + G
Sbjct: 151 MINGYVRRGWAYEALNFYREMKVEGIKPDEVTMIGVVSSCAQLEDLDLGRESHCYIEENG 210
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRL--------------RSVVSWNSIIS 106
+ + L+DMY KC + S+RK+ D M + + VV WN++I
Sbjct: 211 LKLTVPLANALMDMYMKCGNLESARKLFDSMTNKTMVSWTTMLFDEMPDKDVVPWNAMIG 270
Query: 107 AHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLN 162
+ A EA+ + EM + + T VS +S CS GI +H + K L
Sbjct: 271 GYVHANRGKEALALFNEMQAMNINPDEVTMVSCLSACSQLGALDVGIWIHHYIEKHELSL 330
Query: 163 NEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQM 222
N + L +++ MYAK GK+ +A +F E+ + ++WT II G GN + A ++M
Sbjct: 331 N-VALGTALIDMYAKCGKITKAIQVFQELPGRNSLTWTAIISGLALHGNAHGAIAYFSEM 389
Query: 223 RRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNL--LVSMYTKCG 280
SV PD V FL L+ C G L + + S +N L + +V + + G
Sbjct: 390 IDNSVMPDEVTFLGLLSACCH-GGLVEEGRKYFSQMSSKFNLSPKLKHYSCMVDLLGRAG 448
Query: 281 DLELARRVFDAV-LEKSVFLWTSMI 304
LE A + ++ +E +W ++
Sbjct: 449 LLEEAEELIKSMPIEADAVVWGALF 473
>gi|357477865|ref|XP_003609218.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355510273|gb|AES91415.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1134
Score = 338 bits (866), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 205/620 (33%), Positives = 340/620 (54%), Gaps = 20/620 (3%)
Query: 12 EETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKR----VHSHVLKVGFQQDAFV 67
EE + M + V NS + ++L +++ +GKR VH+++ + G DA +
Sbjct: 434 EEAAKVFKEM-KDLVEINSESLVVLLSTFTEFSNLKEGKRKGQEVHAYLFRSGLV-DARI 491
Query: 68 QTG--LIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMW 125
G L++MY KC+ ++ V MP + VSWNS+IS +EA+ M
Sbjct: 492 SIGNALVNMYGKCTAIDNACSVFQLMPSK--DTVSWNSMISGLDHNERFEEAVSCFHTMK 549
Query: 126 VLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKV 181
G+ S + +S +S CS G +H +K GL + ++ ++N+++++YA+ +
Sbjct: 550 RNGMVPSNFSVISTLSSCSSLGWLTLGRQIHGEGFKWGL-DLDVSVSNALLTLYAETDSI 608
Query: 182 NEARSIFDEIGETSIVSWTTIIGGYVNV-GNVNEAFGLCNQMRRMSVTPDLVVFLNLILG 240
NE + +F ++ E VSW + IG +V +A +M + P+ V F+N++
Sbjct: 609 NECQKVFFQMPEYDQVSWNSFIGALAKYEASVLQALKYFLEMMQAGWRPNRVTFINILAA 668
Query: 241 CAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFL- 299
+ L L +H+L+LK +++ ++N L++ Y KC +E +F + E+ +
Sbjct: 669 VSSFSVLGLGHQIHALILKYSVADDNAIENALLAFYGKCEQMEDCEIIFSRMSERRDEVS 728
Query: 300 WTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIV 359
W SMI GY G +A++L +++ + + T AT LSACA + +L +G E+ V
Sbjct: 729 WNSMISGYLHSGILHKAMDLVWPMMQRGQKLDGFTFATVLSACASVATLERGMEVHACAV 788
Query: 360 LNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALN 419
LES+ V ++L+ M++KCG+I+ A FE +P +++ W++MI+GYA HG G +AL
Sbjct: 789 RACLESDVVVGSALVDMYAKCGKIDYASRFFELMPVRNIYSWNSMISGYARHGHGQKALK 848
Query: 420 LFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDL 479
+F +M+ G PD V + +LSACSH G+VD+G FKSM +G+ P IEH+ C+VDL
Sbjct: 849 IFTRMKQ-HGQSPDHVTFVGVLSACSHVGLVDEGYKHFKSMGEVYGLSPRIEHFSCMVDL 907
Query: 480 LGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHH--NVELGEYAAKNLLTLNPGSTG 537
LGRAG I MP++ +W +L AC + + N ELG+ AAK L+ L P +
Sbjct: 908 LGRAGDVKKIEDFIKTMPMDPNILIWRTVLGACCRANGRNTELGQRAAKMLIELEPQNAV 967
Query: 538 NYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVD 597
NY+L++N+ + G W++ AR M + K+ G S V + V +FVAGD++H
Sbjct: 968 NYVLLSNMHAAGGNWEDVVEARLAMRKAAVKKDAGCSWVNMKDGVHLFVAGDQTHPEKEK 1027
Query: 598 IRKTLKELHIKLLEAGYIAE 617
I + LKEL K+ +AGY+ E
Sbjct: 1028 IYEKLKELMNKIRDAGYVPE 1047
Score = 170 bits (430), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 132/494 (26%), Positives = 242/494 (48%), Gaps = 33/494 (6%)
Query: 44 NSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNS 103
+S++D +H + K GF D F LI++Y + + VS+RK+ DEMP +++VSW+
Sbjct: 154 SSLYDANHLHLQLYKTGFTDDVFFCNTLINIYVRIGNLVSARKLFDEMP--QKNLVSWSC 211
Query: 104 IISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCS------FRQGISMHCCVYK 157
+IS +++ + DEA + K + GL + S + C + G+ +H + K
Sbjct: 212 LISGYTQNRMPDEACSLFKGVISSGLLPNHFAVGSALRACQQCGSTGIKLGMQIHAFICK 271
Query: 158 LGLLNNEIPLANSVMSMYAKF-GKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAF 216
L +++ I L+N +MSMY+ G +++A +FDEI + V+W +II Y G+ AF
Sbjct: 272 LPCVSDMI-LSNVLMSMYSDCSGSIDDAHRVFDEIKFRNSVTWNSIISVYCRRGDAVSAF 330
Query: 217 GLCNQMR----RMSVTPDLVVFLNLILGCAQVGNLFLAL--SMHSLLLKSGYNNEDPLDN 270
L + M+ +++ P+ +L+ + + L L M + + KSG+ + + +
Sbjct: 331 KLFSVMQMEGVELNLRPNEYTLCSLVTAACSLADCGLVLLEQMLTRIEKSGFLRDLYVGS 390
Query: 271 LLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRP 330
LV+ + + G ++ A+ +F + +++ ++ G A+ EA +FK +K V
Sbjct: 391 ALVNGFARYGLMDCAKMIFKQMYDRNAVTMNGLMVGLARQHQGEEAAKVFKE-MKDLVEI 449
Query: 331 NEATLATTLSACAELGSLS----KGKEIEEYIVLNGLESNR-QVQTSLIHMFSKCGRINK 385
N +L LS E +L KG+E+ Y+ +GL R + +L++M+ KC I+
Sbjct: 450 NSESLVVLLSTFTEFSNLKEGKRKGQEVHAYLFRSGLVDARISIGNALVNMYGKCTAIDN 509
Query: 386 AKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACS 445
A VF+ +P KD W++MI+G + ++A++ F+ M+ G+ P S LS+CS
Sbjct: 510 ACSVFQLMPSKDTVSWNSMISGLDHNERFEEAVSCFHTMKR-NGMVPSNFSVISTLSSCS 568
Query: 446 HSGMVDDGLSF----FKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQ 501
G + G FK +G++ + L+ L + K +MP E
Sbjct: 569 SLGWLTLGRQIHGEGFK-----WGLDLDVSVSNALLTLYAETDSINECQKVFFQMP-EYD 622
Query: 502 AQVWAPLLSACMKH 515
W + A K+
Sbjct: 623 QVSWNSFIGALAKY 636
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 101/413 (24%), Positives = 207/413 (50%), Gaps = 11/413 (2%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI +N FEE +S + +M + G+ ++F+ L +C+++ + G+++H K G
Sbjct: 528 MISGLDHNERFEEAVSCFHTMKRNGMVPSNFSVISTLSSCSSLGWLTLGRQIHGEGFKWG 587
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLND-EAIL 119
D V L+ +Y++ +KV +MP VSWNS I A ++ + +A+
Sbjct: 588 LDLDVSVSNALLTLYAETDSINECQKVFFQMPE--YDQVSWNSFIGALAKYEASVLQALK 645
Query: 120 VLKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMY 175
EM G + TF+++++ S G +H + K + ++ + N++++ Y
Sbjct: 646 YFLEMMQAGWRPNRVTFINILAAVSSFSVLGLGHQIHALILKYSVADDN-AIENALLAFY 704
Query: 176 AKFGKVNEARSIFDEIGE-TSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVF 234
K ++ + IF + E VSW ++I GY++ G +++A L M + D F
Sbjct: 705 GKCEQMEDCEIIFSRMSERRDEVSWNSMISGYLHSGILHKAMDLVWPMMQRGQKLDGFTF 764
Query: 235 LNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLE 294
++ CA V L + +H+ +++ ++ + + LV MY KCG ++ A R F+ +
Sbjct: 765 ATVLSACASVATLERGMEVHACAVRACLESDVVVGSALVDMYAKCGKIDYASRFFELMPV 824
Query: 295 KSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKG-KE 353
++++ W SMI GYA+ G+ +A+ +F R+ + P+ T LSAC+ +G + +G K
Sbjct: 825 RNIYSWNSMISGYARHGHGQKALKIFTRMKQHGQSPDHVTFVGVLSACSHVGLVDEGYKH 884
Query: 354 IEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVP-DKDLAVWSAMI 405
+ + GL + + ++ + + G + K ++ + +P D ++ +W ++
Sbjct: 885 FKSMGEVYGLSPRIEHFSCMVDLLGRAGDVKKIEDFIKTMPMDPNILIWRTVL 937
Score = 142 bits (357), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 125/466 (26%), Positives = 229/466 (49%), Gaps = 28/466 (6%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINS--IWDGKRVHSHVLK 58
+I T N +E S + ++ +G+ N F L+AC S I G ++H+ + K
Sbjct: 212 LISGYTQNRMPDEACSLFKGVISSGLLPNHFAVGSALRACQQCGSTGIKLGMQIHAFICK 271
Query: 59 VGFQQDAFVQTGLIDMYSKCSDFV-SSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEA 117
+ D + L+ MYS CS + + +V DE ++ R+ V+WNSIIS + R A
Sbjct: 272 LPCVSDMILSNVLMSMYSDCSGSIDDAHRVFDE--IKFRNSVTWNSIISVYCRRGDAVSA 329
Query: 118 ILVLKEMWVLGLELSAS----TFVSVVS-GCSFRQ-GI----SMHCCVYKLGLLNNEIPL 167
+ M + G+EL+ T S+V+ CS G+ M + K G L ++ +
Sbjct: 330 FKLFSVMQMEGVELNLRPNEYTLCSLVTAACSLADCGLVLLEQMLTRIEKSGFL-RDLYV 388
Query: 168 ANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSV 227
+++++ +A++G ++ A+ IF ++ + + V+ ++ G EA + +M+ +
Sbjct: 389 GSALVNGFARYGLMDCAKMIFKQMYDRNAVTMNGLMVGLARQHQGEEAAKVFKEMKDLVE 448
Query: 228 --TPDLVVFLNLILGCAQVGNL----FLALSMHSLLLKSGY-NNEDPLDNLLVSMYTKCG 280
+ LVV L+ + NL +H+ L +SG + + N LV+MY KC
Sbjct: 449 INSESLVVLLSTF---TEFSNLKEGKRKGQEVHAYLFRSGLVDARISIGNALVNMYGKCT 505
Query: 281 DLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLS 340
++ A VF + K W SMI G EAV+ F + + + P+ ++ +TLS
Sbjct: 506 AIDNACSVFQLMPSKDTVSWNSMISGLDHNERFEEAVSCFHTMKRNGMVPSNFSVISTLS 565
Query: 341 ACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAV 400
+C+ LG L+ G++I GL+ + V +L+ ++++ IN+ ++VF ++P+ D
Sbjct: 566 SCSSLGWLTLGRQIHGEGFKWGLDLDVSVSNALLTLYAETDSINECQKVFFQMPEYDQVS 625
Query: 401 WSAMINGYAIHGMGD-QALNLFYKMQHVEGLKPDAVVYTSILSACS 445
W++ I A + QAL F +M G +P+ V + +IL+A S
Sbjct: 626 WNSFIGALAKYEASVLQALKYFLEMMQA-GWRPNRVTFINILAAVS 670
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 87/321 (27%), Positives = 154/321 (47%), Gaps = 16/321 (4%)
Query: 246 NLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIG 305
+L+ A +H L K+G+ ++ N L+++Y + G+L AR++FD + +K++ W+ +I
Sbjct: 155 SLYDANHLHLQLYKTGFTDDVFFCNTLINIYVRIGNLVSARKLFDEMPQKNLVSWSCLIS 214
Query: 306 GYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGS--LSKGKEIEEYIVLNGL 363
GY Q P EA +LFK ++ + + PN + + L AC + GS + G +I +I
Sbjct: 215 GYTQNRMPDEACSLFKGVISSGLLPNHFAVGSALRACQQCGSTGIKLGMQIHAFICKLPC 274
Query: 364 ESNRQVQTSLIHMFSKC-GRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFY 422
S+ + L+ M+S C G I+ A VF+ + ++ W+++I+ Y G A LF
Sbjct: 275 VSDMILSNVLMSMYSDCSGSIDDAHRVFDEIKFRNSVTWNSIISVYCRRGDAVSAFKLFS 334
Query: 423 KMQHVEG----LKPDAVVYTSILS-ACSHSGMVDDGLSFFKSMQSNF---GIEPSIEHYL 474
MQ +EG L+P+ S+++ ACS + D GL + M + G +
Sbjct: 335 VMQ-MEGVELNLRPNEYTLCSLVTAACS---LADCGLVLLEQMLTRIEKSGFLRDLYVGS 390
Query: 475 CLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPG 534
LV+ R G D A K I + + A L+ + H E K + L
Sbjct: 391 ALVNGFARYGLMDCA-KMIFKQMYDRNAVTMNGLMVGLARQHQGEEAAKVFKEMKDLVEI 449
Query: 535 STGNYILMANLFTSAGMWKEA 555
++ + +++ + FT KE
Sbjct: 450 NSESLVVLLSTFTEFSNLKEG 470
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 101/222 (45%), Gaps = 7/222 (3%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI ++G + + M+Q G + FTF VL ACA++ ++ G VH+ ++
Sbjct: 732 MISGYLHSGILHKAMDLVWPMMQRGQKLDGFTFATVLSACASVATLERGMEVHACAVRAC 791
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+ D V + L+DMY+KC + + + MPV R++ SWNS+IS ++R +A+ +
Sbjct: 792 LESDVVVGSALVDMYAKCGKIDYASRFFELMPV--RNIYSWNSMISGYARHGHGQKALKI 849
Query: 121 LKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYK-LGLLNNEIPLANSVMSMYAKFG 179
M G TFV V+S CS + +K +G + P M G
Sbjct: 850 FTRMKQHGQSPDHVTFVGVLSACSHVGLVDEGYKHFKSMGEVYGLSPRIEHFSCMVDLLG 909
Query: 180 KVNEARSIFDEIG----ETSIVSWTTIIGGYVNVGNVNEAFG 217
+ + + I D I + +I+ W T++G N G
Sbjct: 910 RAGDVKKIEDFIKTMPMDPNILIWRTVLGACCRANGRNTELG 951
>gi|356497951|ref|XP_003517819.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g69350, mitochondrial-like [Glycine max]
Length = 828
Score = 338 bits (866), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 200/595 (33%), Positives = 314/595 (52%), Gaps = 11/595 (1%)
Query: 8 NGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFV 67
NG E L M+ GV +S T V +AC + + K VH +V++ DA +
Sbjct: 181 NGRPREGLEMLRWMVSEGVGPDSVTMLSVAEACGKVGCLRLAKSVHGYVIRKEMAGDASL 240
Query: 68 QTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVL 127
+ LI MY +CS ++ + + V S W S+IS+ ++ +EAI K+M
Sbjct: 241 RNSLIVMYGQCSYLRGAKGMFE--SVSDPSTACWTSMISSCNQNGCFEEAIDAFKKMQES 298
Query: 128 GLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNE 183
+E++A T +SV+ C+ ++G S+HC + + + ++ L ++M YA K++
Sbjct: 299 EVEVNAVTMISVLCCCARLGWLKEGKSVHCFILRREMDGADLDLGPALMDFYAACWKISS 358
Query: 184 ARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQ 243
+ IG +S+VSW T+I Y G EA L M + PD + I CA
Sbjct: 359 CEKLLCLIGNSSVVSWNTLISIYAREGLNEEAMVLFVCMLEKGLMPDSFSLASSISACAG 418
Query: 244 VGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSM 303
++ +H + K G+ +E + N L+ MY+KCG ++LA +FD + EKS+ W M
Sbjct: 419 ASSVRFGQQIHGHVTKRGFADE-FVQNSLMDMYSKCGFVDLAYTIFDKIWEKSIVTWNCM 477
Query: 304 IGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGL 363
I G++Q G EA+ LF + + NE T + + AC+ G L KGK I +V++G+
Sbjct: 478 ICGFSQNGISVEALKLFDEMCFNCMDINEVTFLSAIQACSNSGYLLKGKWIHHKLVVSGV 537
Query: 364 ESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYK 423
+ + + T+L+ M++KCG + A+ VF +P+K + WSAMI Y IHG A LF K
Sbjct: 538 QKDLYIDTALVDMYAKCGDLKTAQGVFNSMPEKSVVSWSAMIAAYGIHGQITAATTLFTK 597
Query: 424 MQHVEG-LKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGR 482
M VE +KP+ V + +ILSAC H+G V++G +F SM+ ++GI P+ EH+ +VDLL R
Sbjct: 598 M--VESHIKPNEVTFMNILSACRHAGSVEEGKFYFNSMR-DYGIVPNAEHFASIVDLLSR 654
Query: 483 AGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILM 542
AG D A + I + A +W LL+ C H ++L K L + TG Y L+
Sbjct: 655 AGDIDGAYEIIKSTCQHIDASIWGALLNGCRIHGRMDLIHNIHKELREIRTNDTGYYTLL 714
Query: 543 ANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVD 597
+N++ G W E+ R M+ L K PG+S +EID + F AGD S +D
Sbjct: 715 SNIYAEGGNWYESRKVRSRMEGMGLKKVPGYSSIEIDDKIYRFGAGDTSSAWQMD 769
Score = 226 bits (576), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 148/448 (33%), Positives = 236/448 (52%), Gaps = 13/448 (2%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI + NG FEE + + M ++ V N+ T VL CA + + +GK VH +L+
Sbjct: 275 MISSCNQNGCFEEAIDAFKKMQESEVEVNAVTMISVLCCCARLGWLKEGKSVHCFILRRE 334
Query: 61 FQ-QDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAIL 119
D + L+D Y+ C S K+L + SVVSWN++IS ++R LN+EA++
Sbjct: 335 MDGADLDLGPALMDFYAACWKISSCEKLL--CLIGNSSVVSWNTLISIYAREGLNEEAMV 392
Query: 120 VLKEMWVLGLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMY 175
+ M GL + + S +S C S R G +H V K G + + NS+M MY
Sbjct: 393 LFVCMLEKGLMPDSFSLASSISACAGASSVRFGQQIHGHVTKRGFADEFVQ--NSLMDMY 450
Query: 176 AKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFL 235
+K G V+ A +IFD+I E SIV+W +I G+ G EA L ++M + + V FL
Sbjct: 451 SKCGFVDLAYTIFDKIWEKSIVTWNCMICGFSQNGISVEALKLFDEMCFNCMDINEVTFL 510
Query: 236 NLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEK 295
+ I C+ G L +H L+ SG + +D LV MY KCGDL+ A+ VF+++ EK
Sbjct: 511 SAIQACSNSGYLLKGKWIHHKLVVSGVQKDLYIDTALVDMYAKCGDLKTAQGVFNSMPEK 570
Query: 296 SVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIE 355
SV W++MI Y G + A LF +++++ ++PNE T LSAC GS+ +GK
Sbjct: 571 SVVSWSAMIAAYGIHGQITAATTLFTKMVESHIKPNEVTFMNILSACRHAGSVEEGKFYF 630
Query: 356 EYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDK-DLAVWSAMINGYAIHGMG 414
+ G+ N + S++ + S+ G I+ A E+ + D ++W A++NG IHG
Sbjct: 631 NSMRDYGIVPNAEHFASIVDLLSRAGDIDGAYEIIKSTCQHIDASIWGALLNGCRIHGRM 690
Query: 415 DQALNLFYKMQHVEGLKPDAVVYTSILS 442
D N+ +++ + + + Y ++LS
Sbjct: 691 DLIHNIHKELREI---RTNDTGYYTLLS 715
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 141/528 (26%), Positives = 261/528 (49%), Gaps = 19/528 (3%)
Query: 11 FEETLSTYSSMLQTG---VHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFV 67
F++ +S Y +Q G +F +P V+KA + + + G++VH ++K G D +
Sbjct: 80 FDQVVSLYHHHIQKGSRLTQNCTFLYPSVIKAISVVGGLVVGRKVHGRIVKTGLGTDHVI 139
Query: 68 QTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVL 127
T L+ MY + +RKV DE +R+R +VSW+S+++ + E + +L+ M
Sbjct: 140 GTSLLGMYGELGCLSDARKVFDE--IRVRDLVSWSSVVACYVENGRPREGLEMLRWMVSE 197
Query: 128 GLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNE 183
G+ + T +SV C R S+H V + + + L NS++ MY + +
Sbjct: 198 GVGPDSVTMLSVAEACGKVGCLRLAKSVHGYVIRKEMAGDA-SLRNSLIVMYGQCSYLRG 256
Query: 184 ARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQ 243
A+ +F+ + + S WT++I G EA +M+ V + V ++++ CA+
Sbjct: 257 AKGMFESVSDPSTACWTSMISSCNQNGCFEEAIDAFKKMQESEVEVNAVTMISVLCCCAR 316
Query: 244 VGNLFLALSMHSLLLKSGYNNED-PLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTS 302
+G L S+H +L+ + D L L+ Y C + ++ + SV W +
Sbjct: 317 LGWLKEGKSVHCFILRREMDGADLDLGPALMDFYAACWKISSCEKLLCLIGNSSVVSWNT 376
Query: 303 MIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNG 362
+I YA+ G EA+ LF +L+ + P+ +LA+++SACA S+ G++I ++ G
Sbjct: 377 LISIYAREGLNEEAMVLFVCMLEKGLMPDSFSLASSISACAGASSVRFGQQIHGHVTKRG 436
Query: 363 LESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFY 422
++ VQ SL+ M+SKCG ++ A +F+++ +K + W+ MI G++ +G+ +AL LF
Sbjct: 437 F-ADEFVQNSLMDMYSKCGFVDLAYTIFDKIWEKSIVTWNCMICGFSQNGISVEALKLFD 495
Query: 423 KMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGR 482
+M + + V + S + ACS+SG + G + + G++ + LVD+ +
Sbjct: 496 EMC-FNCMDINEVTFLSAIQACSNSGYLLKGKWIHHKLVVS-GVQKDLYIDTALVDMYAK 553
Query: 483 AGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLT 530
G A + MP E W+ +++A H + AA L T
Sbjct: 554 CGDLKTAQGVFNSMP-EKSVVSWSAMIAAYGIHGQIT----AATTLFT 596
Score = 174 bits (442), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 129/486 (26%), Positives = 238/486 (48%), Gaps = 23/486 (4%)
Query: 34 PLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPV 93
PL ++C+ + S+ ++H+H++ G D T L++ Y++ SSR V + P
Sbjct: 6 PL-FRSCSTLRSL---SQLHAHLVVTGLHSDPLASTKLLESYARMGSLHSSRLVFETHPS 61
Query: 94 RLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSAS-TF--------VSVVSGCS 144
+ +I + L D+ + + G L+ + TF +SVV G
Sbjct: 62 P--DSFMFGVLIKCYLWHHLFDQVVSLYHHHIQKGSRLTQNCTFLYPSVIKAISVVGG-- 117
Query: 145 FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIG 204
G +H + K GL + + + S++ MY + G +++AR +FDEI +VSW++++
Sbjct: 118 LVVGRKVHGRIVKTGLGTDHV-IGTSLLGMYGELGCLSDARKVFDEIRVRDLVSWSSVVA 176
Query: 205 GYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNN 264
YV G E + M V PD V L++ C +VG L LA S+H +++
Sbjct: 177 CYVENGRPREGLEMLRWMVSEGVGPDSVTMLSVAEACGKVGCLRLAKSVHGYVIRKEMAG 236
Query: 265 EDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLL 324
+ L N L+ MY +C L A+ +F++V + S WTSMI Q G EA++ FK++
Sbjct: 237 DASLRNSLIVMYGQCSYLRGAKGMFESVSDPSTACWTSMISSCNQNGCFEEAIDAFKKMQ 296
Query: 325 KTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLE-SNRQVQTSLIHMFSKCGRI 383
++ V N T+ + L CA LG L +GK + +I+ ++ ++ + +L+ ++ C +I
Sbjct: 297 ESEVEVNAVTMISVLCCCARLGWLKEGKSVHCFILRREMDGADLDLGPALMDFYAACWKI 356
Query: 384 NKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSA 443
+ +++ + + + W+ +I+ YA G+ ++A+ LF M +GL PD+ S +SA
Sbjct: 357 SSCEKLLCLIGNSSVVSWNTLISIYAREGLNEEAMVLFVCMLE-KGLMPDSFSLASSISA 415
Query: 444 CSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQ 503
C+ + V G + + +++ L+D+ + G DLA TI + E
Sbjct: 416 CAGASSVRFGQQIHGHVTKRGFADEFVQN--SLMDMYSKCGFVDLAY-TIFDKIWEKSIV 472
Query: 504 VWAPLL 509
W ++
Sbjct: 473 TWNCMI 478
>gi|357129947|ref|XP_003566620.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
mitochondrial-like [Brachypodium distachyon]
Length = 902
Score = 338 bits (866), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 193/600 (32%), Positives = 327/600 (54%), Gaps = 11/600 (1%)
Query: 13 ETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLI 72
E + + M + G+ + FT+ VL ACA+++S G++V +K FV +
Sbjct: 284 EAIQMFLYMKRLGLEADEFTYVSVLGACAHLDSHCLGRQVQCVTIKNCMDASLFVANATL 343
Query: 73 DMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELS 132
DM+SK ++ + + + + VSWN+++ + ++EAI +LK M + G+
Sbjct: 344 DMHSKFGAIDDAKTLFN--LITYKDTVSWNALLVGLTHNEEDEEAIHMLKGMNLDGVTPD 401
Query: 133 ASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIF 188
+F +V++ CS G +HC K + +N + +S++ Y+K G V R +
Sbjct: 402 EVSFATVINACSNIRATETGKQIHCLAMKHSICSNH-AVGSSLIDFYSKHGDVESCRKVL 460
Query: 189 DEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLF 248
++ +SIV +I G V +EA L Q+ R + P F +++ GC + +
Sbjct: 461 AQVDASSIVPRNVLIAGLVQNNREDEAIDLFQQVLRDGLKPSSFTFSSILSGCTGLLSSI 520
Query: 249 LALSMHSLLLKSGYNNEDPLDNL-LVSMYTKCGDLELARRVFDAVLE-KSVFLWTSMIGG 306
+ +H LKSG+ N+D + LV Y K E A ++ + + K++ WT+++ G
Sbjct: 521 IGKQVHCYTLKSGFLNDDTSVGVSLVGTYLKARMPEDANKLLIEMPDHKNLVEWTAIVSG 580
Query: 307 YAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESN 366
YAQ GY +++ F R+ V P+E T A+ L AC+E+ +LS GKEI I+ +G S
Sbjct: 581 YAQNGYSYQSLLSFWRMRSYDVHPDEVTFASILKACSEMTALSDGKEIHGLIIKSGFGSY 640
Query: 367 RQVQTSLIHMFSKCGRINKAKEVFERVPDK-DLAVWSAMINGYAIHGMGDQALNLFYKMQ 425
+ +++I M+SKCG I + E F+ + K D+ +W++MI G+A +G D+AL LF KMQ
Sbjct: 641 KTATSAIIDMYSKCGDIISSFEAFKELKSKQDITLWNSMILGFAKNGYADEALLLFQKMQ 700
Query: 426 HVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGR 485
+ +K D V + +L AC+H+G++ +G +F SM +GI P ++HY C +DLLGR G
Sbjct: 701 DSQ-IKSDEVTFLGVLIACAHAGLISEGRHYFDSMSKVYGIMPRVDHYACFIDLLGRGGH 759
Query: 486 FDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANL 545
A + I+E+P +WA L+AC H + E GE AAK L+ L P ++ Y+L++N+
Sbjct: 760 LQEAQEVINELPFRPDGVIWATYLAACRMHKDEERGEIAAKELVELEPQNSSTYVLLSNM 819
Query: 546 FTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKEL 605
+ +AG W EA AR M ++ TK PG S + + +F+ D++H ++ I + L L
Sbjct: 820 YAAAGNWVEAKMAREAMREKGATKFPGCSWITVGNKTSLFLVQDKNHLGALRIYEMLDNL 879
Score = 201 bits (512), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 140/514 (27%), Positives = 250/514 (48%), Gaps = 17/514 (3%)
Query: 5 STNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQD 64
+ +G E Y M G+ TF +L A AN + +G++VH+ ++ G +
Sbjct: 175 AQQSGIEHEVFGLYKDMRCWGLWPTRSTFASMLSAAANATAFIEGRQVHAAAVRHGLDAN 234
Query: 65 AFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEM 124
FV + LI++Y+KC + V D ++VV WN++++ R EAI + M
Sbjct: 235 VFVGSSLINLYAKCGCIGDAILVFD--CSGEKNVVMWNAMLNGLVRNEYQVEAIQMFLYM 292
Query: 125 WVLGLELSASTFVSVVSGCSFRQGISMHC------CVYKLGLLNNEIPLANSVMSMYAKF 178
LGLE T+VSV+ C+ + HC CV ++ + +AN+ + M++KF
Sbjct: 293 KRLGLEADEFTYVSVLGACAH---LDSHCLGRQVQCVTIKNCMDASLFVANATLDMHSKF 349
Query: 179 GKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLI 238
G +++A+++F+ I VSW ++ G + EA + M VTPD V F +I
Sbjct: 350 GAIDDAKTLFNLITYKDTVSWNALLVGLTHNEEDEEAIHMLKGMNLDGVTPDEVSFATVI 409
Query: 239 LGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVF 298
C+ + +H L +K + + + L+ Y+K GD+E R+V V S+
Sbjct: 410 NACSNIRATETGKQIHCLAMKHSICSNHAVGSSLIDFYSKHGDVESCRKVLAQVDASSIV 469
Query: 299 LWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYI 358
+I G Q EA++LF+++L+ ++P+ T ++ LS C L S GK++ Y
Sbjct: 470 PRNVLIAGLVQNNREDEAIDLFQQVLRDGLKPSSFTFSSILSGCTGLLSSIIGKQVHCYT 529
Query: 359 VLNG-LESNRQVQTSLIHMFSKCGRINKAKEVFERVPD-KDLAVWSAMINGYAIHGMGDQ 416
+ +G L + V SL+ + K A ++ +PD K+L W+A+++GYA +G Q
Sbjct: 530 LKSGFLNDDTSVGVSLVGTYLKARMPEDANKLLIEMPDHKNLVEWTAIVSGYAQNGYSYQ 589
Query: 417 ALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFK-SMQSNFGIEPSIEHYLC 475
+L F++M+ + + PD V + SIL ACS + DG ++S FG +
Sbjct: 590 SLLSFWRMRSYD-VHPDEVTFASILKACSEMTALSDGKEIHGLIIKSGFGSYKTATS--A 646
Query: 476 LVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLL 509
++D+ + G + + E+ + +W ++
Sbjct: 647 IIDMYSKCGDIISSFEAFKELKSKQDITLWNSMI 680
Score = 168 bits (426), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 119/479 (24%), Positives = 220/479 (45%), Gaps = 48/479 (10%)
Query: 25 GVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSS 84
GV + F L AC+ + ++ GK+ H K G AF L++MY++C +
Sbjct: 26 GVRPDQFDLAATLSACSRLGALVSGKQAHCDAEKRGLGSGAFCAAALVNMYARCGRVGDA 85
Query: 85 RKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCS 144
R+V + L V W S+IS + RA EA+ + M +G T V+VV
Sbjct: 86 RRVFG--GISLPDTVCWASMISGYHRAGRFQEAVCLFTRMEKMGSSPDRVTCVAVV---- 139
Query: 145 FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEI-GETSIVSWTTII 203
C + L G++ +AR++ + +S V+W +I
Sbjct: 140 --------CALTAL--------------------GRLEDARTLLHRMPAPSSTVAWNAVI 171
Query: 204 GGYVNVGNV-NEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGY 262
GY + +E FGL MR + P F +++ A +H+ ++ G
Sbjct: 172 SGYAQQSGIEHEVFGLYKDMRCWGLWPTRSTFASMLSAAANATAFIEGRQVHAAAVRHGL 231
Query: 263 NNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKR 322
+ + + L+++Y KCG + A VFD EK+V +W +M+ G + Y EA+ +F
Sbjct: 232 DANVFVGSSLINLYAKCGCIGDAILVFDCSGEKNVVMWNAMLNGLVRNEYQVEAIQMFLY 291
Query: 323 LLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGR 382
+ + + +E T + L ACA L S G++++ + N ++++ V + + M SK G
Sbjct: 292 MKRLGLEADEFTYVSVLGACAHLDSHCLGRQVQCVTIKNCMDASLFVANATLDMHSKFGA 351
Query: 383 INKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILS 442
I+ AK +F + KD W+A++ G + ++A+++ M +++G+ PD V + ++++
Sbjct: 352 IDDAKTLFNLITYKDTVSWNALLVGLTHNEEDEEAIHMLKGM-NLDGVTPDEVSFATVIN 410
Query: 443 ACSHSGMVDDG-----LSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEM 496
ACS+ + G L+ S+ SN + S L+D + G + K + ++
Sbjct: 411 ACSNIRATETGKQIHCLAMKHSICSNHAVGSS------LIDFYSKHGDVESCRKVLAQV 463
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 100/393 (25%), Positives = 201/393 (51%), Gaps = 8/393 (2%)
Query: 58 KVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSR-ACLNDE 116
K+G D ++ + +R +L MP S V+WN++IS +++ + + E
Sbjct: 125 KMGSSPDRVTCVAVVCALTALGRLEDARTLLHRMPAP-SSTVAWNAVISGYAQQSGIEHE 183
Query: 117 AILVLKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVM 172
+ K+M GL + STF S++S + F +G +H + GL N + + +S++
Sbjct: 184 VFGLYKDMRCWGLWPTRSTFASMLSAAANATAFIEGRQVHAAAVRHGLDAN-VFVGSSLI 242
Query: 173 SMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLV 232
++YAK G + +A +FD GE ++V W ++ G V EA + M+R+ + D
Sbjct: 243 NLYAKCGCIGDAILVFDCSGEKNVVMWNAMLNGLVRNEYQVEAIQMFLYMKRLGLEADEF 302
Query: 233 VFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAV 292
+++++ CA + + L + + +K+ + + N + M++K G ++ A+ +F+ +
Sbjct: 303 TYVSVLGACAHLDSHCLGRQVQCVTIKNCMDASLFVANATLDMHSKFGAIDDAKTLFNLI 362
Query: 293 LEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGK 352
K W +++ G EA+++ K + V P+E + AT ++AC+ + + GK
Sbjct: 363 TYKDTVSWNALLVGLTHNEEDEEAIHMLKGMNLDGVTPDEVSFATVINACSNIRATETGK 422
Query: 353 EIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHG 412
+I + + + SN V +SLI +SK G + ++V +V + + +I G +
Sbjct: 423 QIHCLAMKHSICSNHAVGSSLIDFYSKHGDVESCRKVLAQVDASSIVPRNVLIAGLVQNN 482
Query: 413 MGDQALNLFYKMQHVEGLKPDAVVYTSILSACS 445
D+A++LF ++ +GLKP + ++SILS C+
Sbjct: 483 REDEAIDLFQQVLR-DGLKPSSFTFSSILSGCT 514
>gi|326504484|dbj|BAJ91074.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 823
Score = 338 bits (866), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 205/629 (32%), Positives = 344/629 (54%), Gaps = 24/629 (3%)
Query: 6 TNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWD-GKRVHSHVLKVGF-QQ 63
T NG+ +E L ML++G+ N+FT AC G V +K GF
Sbjct: 122 TRNGAEQEALVLLGEMLESGLRPNAFTLCAAAHACFPGELFRSSGGTVLGFAIKTGFWGT 181
Query: 64 DAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKE 123
D V LIDM+++ D V++RKV + + R +VV W +I+ + + +A+ +
Sbjct: 182 DVSVGCALIDMFARNGDLVAARKVFNGLVER--TVVVWTLMITRYVQGGCAGKAVELFLG 239
Query: 124 MWVLGLELSASTFVSVVSGCSFRQ----GISMHCCVYKLGLLNNEIPLANSVMSMYAKFG 179
M G E T S+VS C+ + G +H V +LGL+++ ++ ++ MY K
Sbjct: 240 MLEDGFEPDGYTMSSMVSACAEQGSAGLGQQLHSLVLRLGLVSDTC-VSCGLVDMYTKLQ 298
Query: 180 ---KVNEARSIFDEIGETSIVSWTTIIGGYVNVG-NVNEAFGLCNQMRRMSVTPDLVVFL 235
+ AR +F + +++SWT +I GYV G N A L +M S+ P+ + +
Sbjct: 299 MEQSMECARKVFKRMPTHNVMSWTALISGYVQCGGQENNAVELLCEMLNESIEPNHLTYS 358
Query: 236 NLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEK 295
+L+ CA + + +H+ ++K+ N + + N LVSMY + G +E AR+ FD + E+
Sbjct: 359 SLLKACANLSDQDSGRQIHARVMKTSIGNVNVVGNALVSMYAESGCMEEARKAFDQLYER 418
Query: 296 SVFLWTSMIG--GYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKE 353
++ +S IG G + + S+ ++ V + T A+ LSA A +G +KG++
Sbjct: 419 NLLSTSSDIGETGRSNASWSSQIESM-------DVGVSTFTFASLLSAAATVGLPTKGQQ 471
Query: 354 IEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDK-DLAVWSAMINGYAIHG 412
+ + G ES++ + SL+ M+S+CG ++ A F+ + D ++ W+++I+ A HG
Sbjct: 472 LHALSIKTGFESDKGISNSLVSMYSRCGYLDDACRAFDEMEDDHNVISWTSIISALAKHG 531
Query: 413 MGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEH 472
++AL+LF+ M + G+KP+ V Y ++LSACSH G+V +G +F+SMQ + + P +EH
Sbjct: 532 HAERALSLFHDMI-LSGVKPNDVTYIAVLSACSHVGLVKEGKEYFRSMQKDHRLIPRMEH 590
Query: 473 YLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLN 532
Y C+VDLL R+G AL+ I+EMP + A VW LL AC + N+E+GE AA++++ L
Sbjct: 591 YACMVDLLARSGLVQEALEFINEMPCKADALVWKTLLGACRTYENIEIGEIAARHVIDLE 650
Query: 533 PGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSH 592
P Y+L++NL+ G+W E A R LM R L+KE G S + + ++ F AGD SH
Sbjct: 651 PQDPAPYVLLSNLYAHGGLWDEVARIRSLMRHRNLSKETGLSWMHVGNTIHEFRAGDTSH 710
Query: 593 HLSVDIRKTLKELHIKLLEAGYIAEADIV 621
+ +I L L ++ + GY+ + IV
Sbjct: 711 PRAQEIYAKLAVLIREIKDIGYVPDTSIV 739
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 135/472 (28%), Positives = 240/472 (50%), Gaps = 39/472 (8%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI G + + + ML+ G + +T ++ ACA S G+++HS VL++G
Sbjct: 220 MITRYVQGGCAGKAVELFLGMLEDGFEPDGYTMSSMVSACAEQGSAGLGQQLHSLVLRLG 279
Query: 61 FQQDAFVQTGLIDMYSKC---SDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDE- 116
D V GL+DMY+K +RKV MP +V+SW ++IS + + C E
Sbjct: 280 LVSDTCVSCGLVDMYTKLQMEQSMECARKVFKRMPT--HNVMSWTALISGYVQ-CGGQEN 336
Query: 117 -AILVLKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSV 171
A+ +L EM +E + T+ S++ C+ G +H V K + N + + N++
Sbjct: 337 NAVELLCEMLNESIEPNHLTYSSLLKACANLSDQDSGRQIHARVMKTSIGNVNV-VGNAL 395
Query: 172 MSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDL 231
+SMYA+ G + EAR FD++ E +++S ++ IG G N ++ +Q+ M V
Sbjct: 396 VSMYAESGCMEEARKAFDQLYERNLLSTSSDIG---ETGRSNASWS--SQIESMDVGVST 450
Query: 232 VVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDA 291
F +L+ A VG +H+L +K+G+ ++ + N LVSMY++CG L+ A R FD
Sbjct: 451 FTFASLLSAAATVGLPTKGQQLHALSIKTGFESDKGISNSLVSMYSRCGYLDDACRAFDE 510
Query: 292 VLEK-SVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSK 350
+ + +V WTS+I A+ G+ A++LF ++ + V+PN+ T LSAC+ +G + +
Sbjct: 511 MEDDHNVISWTSIISALAKHGHAERALSLFHDMILSGVKPNDVTYIAVLSACSHVGLVKE 570
Query: 351 GKEI-----EEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDK-DLAVWSAM 404
GKE +++ ++ +E ++ + ++ G + +A E +P K D VW +
Sbjct: 571 GKEYFRSMQKDHRLIPRMEH----YACMVDLLARSGLVQEALEFINEMPCKADALVWKTL 626
Query: 405 ING---YAIHGMGDQALNLFYKMQHVEGLKP-DAVVYTSILSACSHSGMVDD 452
+ Y +G+ A +HV L+P D Y + + +H G+ D+
Sbjct: 627 LGACRTYENIEIGEIA------ARHVIDLEPQDPAPYVLLSNLYAHGGLWDE 672
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 98/327 (29%), Positives = 176/327 (53%), Gaps = 11/327 (3%)
Query: 148 GISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEI-GETSIVSWTTIIGGY 206
G ++H + +L+ + +ANS+++MY+K G V AR +FD + G +VSWT +
Sbjct: 62 GRALHRRLLGTEVLDADALVANSLLTMYSKCGHVRAARRVFDGMRGLRDLVSWTAMAFCL 121
Query: 207 VNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLAL--SMHSLLLKSGYNN 264
G EA L +M + P+ C G LF + ++ +K+G+
Sbjct: 122 TRNGAEQEALVLLGEMLESGLRPNAFTLCAAAHACFP-GELFRSSGGTVLGFAIKTGFWG 180
Query: 265 ED-PLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRL 323
D + L+ M+ + GDL AR+VF+ ++E++V +WT MI Y Q G +AV LF +
Sbjct: 181 TDVSVGCALIDMFARNGDLVAARKVFNGLVERTVVVWTLMITRYVQGGCAGKAVELFLGM 240
Query: 324 LKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKC--- 380
L+ P+ T+++ +SACAE GS G+++ ++ GL S+ V L+ M++K
Sbjct: 241 LEDGFEPDGYTMSSMVSACAEQGSAGLGQQLHSLVLRLGLVSDTCVSCGLVDMYTKLQME 300
Query: 381 GRINKAKEVFERVPDKDLAVWSAMINGYA-IHGMGDQALNLFYKMQHVEGLKPDAVVYTS 439
+ A++VF+R+P ++ W+A+I+GY G + A+ L +M + E ++P+ + Y+S
Sbjct: 301 QSMECARKVFKRMPTHNVMSWTALISGYVQCGGQENNAVELLCEMLN-ESIEPNHLTYSS 359
Query: 440 ILSACSHSGMVDDGLSFF-KSMQSNFG 465
+L AC++ D G + M+++ G
Sbjct: 360 LLKACANLSDQDSGRQIHARVMKTSIG 386
>gi|357154827|ref|XP_003576915.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like, partial [Brachypodium distachyon]
Length = 735
Score = 337 bits (865), Expect = 8e-90, Method: Compositional matrix adjust.
Identities = 197/586 (33%), Positives = 317/586 (54%), Gaps = 10/586 (1%)
Query: 8 NGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFV 67
N F++ SM+++GV N + V+ AC G VH VLK G +
Sbjct: 155 NKMFDDARQALLSMMRSGVPVNVASLVSVVPACGVEQEGGFGLGVHGLVLKTGLDSIVNL 214
Query: 68 QTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVL 127
L+DMY K +S KV + MP R + VSWNS I A L + + + + M
Sbjct: 215 GNALVDMYGKFGHVEASMKVFEGMPER--NEVSWNSAIGCFLNAGLYGDVLALFRGMSER 272
Query: 128 GLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNE 183
G + T S++ F G +H K + +I +ANS++ MYAKFG + +
Sbjct: 273 GFMPGSITLSSLLPALVELGYFDLGREVHGYSIKRAM-ELDIFVANSLVDMYAKFGSLEK 331
Query: 184 ARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQ 243
A ++F++I ++VSW +I V G +EAFGL +M++ P+ + +NL+ C++
Sbjct: 332 ACAVFEKIEVRNVVSWNAMIANLVQNGAESEAFGLVIKMQKDGECPNSITLVNLLPACSR 391
Query: 244 VGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSM 303
+ +L +H+ +++G + + N L+ MY KCG L LA+ +FD + EK + ++
Sbjct: 392 MASLKTGKQIHAWSIRTGLMFDLFISNALIDMYAKCGQLRLAQSIFD-LSEKDDVSYNTL 450
Query: 304 IGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGL 363
I GY+Q + E++NLFK+L + + + L+AC L S +GKEI +V L
Sbjct: 451 ILGYSQSPWSFESLNLFKQLSSVGIEYDAISFMGALTACTNLSSFKQGKEIHGVLVRRLL 510
Query: 364 ESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYK 423
++ + +L+ +++K G ++ A ++F R+ +KD+A W+ MI GY +HG D A +LF
Sbjct: 511 SNHPFLANTLLGLYTKGGMLDTASKIFNRIKEKDVASWNNMIMGYGMHGQIDAAFHLFDL 570
Query: 424 MQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRA 483
M+ G+ D V Y ++LS CSH G+V+ G +F M + +EP HY C+VDLLGR+
Sbjct: 571 MKD-HGVTYDHVSYIAVLSVCSHGGLVERGKKYFSHMLAQ-NLEPQQMHYACMVDLLGRS 628
Query: 484 GRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMA 543
G+ +++ I +MP + VW LL AC H N+EL +YAA +L L P +G Y ++
Sbjct: 629 GQLTESVEIILDMPFHANSDVWGALLGACRIHGNIELAQYAADHLFELKPEHSGYYSVLR 688
Query: 544 NLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGD 589
N++ AG W EA R LM R++ K P +S V+ +Q F+ GD
Sbjct: 689 NMYAEAGRWNEAHKIRTLMKSRKVQKNPAYSWVQSGNKLQAFLVGD 734
Score = 206 bits (523), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 144/460 (31%), Positives = 232/460 (50%), Gaps = 18/460 (3%)
Query: 13 ETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIW--DGKRVHSHVLKVGFQQDAFVQTG 70
E L Y+ ML++GV + TFP L A A G +H+ L+ G D F
Sbjct: 57 EALLVYNHMLRSGVSPDDRTFPFALHAAAAAAQAHPAKGLELHAAALRSGHLADVFAGNT 116
Query: 71 LIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLE 130
L+ Y+ C +R+V DEMP R VVSWNS++S+ + D+A L M G+
Sbjct: 117 LVAFYAACGHAGDARRVFDEMPAR--DVVSWNSLVSSFLANKMFDDARQALLSMMRSGVP 174
Query: 131 LSASTFVSVVSGCSFRQ----GISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARS 186
++ ++ VSVV C Q G+ +H V K GL ++ + L N+++ MY KFG V +
Sbjct: 175 VNVASLVSVVPACGVEQEGGFGLGVHGLVLKTGL-DSIVNLGNALVDMYGKFGHVEASMK 233
Query: 187 IFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGN 246
+F+ + E + VSW + IG ++N G + L M P + +L+ ++G
Sbjct: 234 VFEGMPERNEVSWNSAIGCFLNAGLYGDVLALFRGMSERGFMPGSITLSSLLPALVELGY 293
Query: 247 LFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGG 306
L +H +K + + N LV MY K G LE A VF+ + ++V W +MI
Sbjct: 294 FDLGREVHGYSIKRAMELDIFVANSLVDMYAKFGSLEKACAVFEKIEVRNVVSWNAMIAN 353
Query: 307 YAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESN 366
Q G SEA L ++ K PN TL L AC+ + SL GK+I + + GL +
Sbjct: 354 LVQNGAESEAFGLVIKMQKDGECPNSITLVNLLPACSRMASLKTGKQIHAWSIRTGLMFD 413
Query: 367 RQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQH 426
+ +LI M++KCG++ A+ +F+ + +KD ++ +I GY+ ++LNLF ++
Sbjct: 414 LFISNALIDMYAKCGQLRLAQSIFD-LSEKDDVSYNTLILGYSQSPWSFESLNLFKQLSS 472
Query: 427 VEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGI 466
V G++ DA+ + L+AC++ LS FK + G+
Sbjct: 473 V-GIEYDAISFMGALTACTN-------LSSFKQGKEIHGV 504
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 118/440 (26%), Positives = 216/440 (49%), Gaps = 12/440 (2%)
Query: 7 NNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAF 66
N G + + L+ + M + G S T +L A + G+ VH + +K + D F
Sbjct: 255 NAGLYGDVLALFRGMSERGFMPGSITLSSLLPALVELGYFDLGREVHGYSIKRAMELDIF 314
Query: 67 VQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWV 126
V L+DMY+K + V +++ V R+VVSWN++I+ + EA ++ +M
Sbjct: 315 VANSLVDMYAKFGSLEKACAVFEKIEV--RNVVSWNAMIANLVQNGAESEAFGLVIKMQK 372
Query: 127 LGLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVN 182
G ++ T V+++ C S + G +H + GL+ ++ ++N+++ MYAK G++
Sbjct: 373 DGECPNSITLVNLLPACSRMASLKTGKQIHAWSIRTGLM-FDLFISNALIDMYAKCGQLR 431
Query: 183 EARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCA 242
A+SIFD + E VS+ T+I GY E+ L Q+ + + D + F+ + C
Sbjct: 432 LAQSIFD-LSEKDDVSYNTLILGYSQSPWSFESLNLFKQLSSVGIEYDAISFMGALTACT 490
Query: 243 QVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTS 302
+ + +H +L++ +N L N L+ +YTK G L+ A ++F+ + EK V W +
Sbjct: 491 NLSSFKQGKEIHGVLVRRLLSNHPFLANTLLGLYTKGGMLDTASKIFNRIKEKDVASWNN 550
Query: 303 MIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNG 362
MI GY G A +LF + V + + LS C+ G + +GK+ +++
Sbjct: 551 MIMGYGMHGQIDAAFHLFDLMKDHGVTYDHVSYIAVLSVCSHGGLVERGKKYFSHMLAQN 610
Query: 363 LESNRQVQTSLIHMFSKCGRINKAKEVFERVP-DKDLAVWSAMINGYAIHGMGDQALNLF 421
LE + ++ + + G++ ++ E+ +P + VW A++ IHG + A
Sbjct: 611 LEPQQMHYACMVDLLGRSGQLTESVEIILDMPFHANSDVWGALLGACRIHGNIELAQ--- 667
Query: 422 YKMQHVEGLKPDAVVYTSIL 441
Y H+ LKP+ Y S+L
Sbjct: 668 YAADHLFELKPEHSGYYSVL 687
Score = 168 bits (425), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 120/422 (28%), Positives = 208/422 (49%), Gaps = 11/422 (2%)
Query: 75 YSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSAS 134
Y+ SD SSR +L P+RLRS WNS+ A S A L EA+LV M G+
Sbjct: 16 YAALSDLASSRLLLFHHPLRLRSAFLWNSLSRALSSASLPTEALLVYNHMLRSGVSPDDR 75
Query: 135 TFVSVVSGCSFR------QGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIF 188
TF + + +G+ +H + G L ++ N++++ YA G +AR +F
Sbjct: 76 TFPFALHAAAAAAQAHPAKGLELHAAALRSGHLA-DVFAGNTLVAFYAACGHAGDARRVF 134
Query: 189 DEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLF 248
DE+ +VSW +++ ++ ++A M R V ++ ++++ C
Sbjct: 135 DEMPARDVVSWNSLVSSFLANKMFDDARQALLSMMRSGVPVNVASLVSVVPACGVEQEGG 194
Query: 249 LALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYA 308
L +H L+LK+G ++ L N LV MY K G +E + +VF+ + E++ W S IG +
Sbjct: 195 FGLGVHGLVLKTGLDSIVNLGNALVDMYGKFGHVEASMKVFEGMPERNEVSWNSAIGCFL 254
Query: 309 QLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQ 368
G + + LF+ + + P TL++ L A ELG G+E+ Y + +E +
Sbjct: 255 NAGLYGDVLALFRGMSERGFMPGSITLSSLLPALVELGYFDLGREVHGYSIKRAMELDIF 314
Query: 369 VQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVE 428
V SL+ M++K G + KA VFE++ +++ W+AMI +G +A L KMQ +
Sbjct: 315 VANSLVDMYAKFGSLEKACAVFEKIEVRNVVSWNAMIANLVQNGAESEAFGLVIKMQK-D 373
Query: 429 GLKPDAVVYTSILSACSHSGMVDDGLSFFK-SMQSNFGIEPSIEHYLCLVDLLGRAGRFD 487
G P+++ ++L ACS + G S+++ + I + L+D+ + G+
Sbjct: 374 GECPNSITLVNLLPACSRMASLKTGKQIHAWSIRTGLMFDLFISN--ALIDMYAKCGQLR 431
Query: 488 LA 489
LA
Sbjct: 432 LA 433
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 85/310 (27%), Positives = 156/310 (50%), Gaps = 9/310 (2%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI N NG+ E M + G NS T +L AC+ + S+ GK++H+ ++ G
Sbjct: 350 MIANLVQNGAESEAFGLVIKMQKDGECPNSITLVNLLPACSRMASLKTGKQIHAWSIRTG 409
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
D F+ LIDMY+KC ++ + D + + VS+N++I +S++ + E++ +
Sbjct: 410 LMFDLFISNALIDMYAKCGQLRLAQSIFD---LSEKDDVSYNTLILGYSQSPWSFESLNL 466
Query: 121 LKEMWVLGLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
K++ +G+E A +F+ ++ C SF+QG +H + + LL+N LAN+++ +Y
Sbjct: 467 FKQLSSVGIEYDAISFMGALTACTNLSSFKQGKEIHGVLVRR-LLSNHPFLANTLLGLYT 525
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K G ++ A IF+ I E + SW +I GY G ++ AF L + M+ VT D V ++
Sbjct: 526 KGGMLDTASKIFNRIKEKDVASWNNMIMGYGMHGQIDAAFHLFDLMKDHGVTYDHVSYIA 585
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDL-ELARRVFDAVLEK 295
++ C+ G + S +L + +V + + G L E + D
Sbjct: 586 VLSVCSHGGLVERGKKYFSHMLAQNLEPQQMHYACMVDLLGRSGQLTESVEIILDMPFHA 645
Query: 296 SVFLWTSMIG 305
+ +W +++G
Sbjct: 646 NSDVWGALLG 655
>gi|449436619|ref|XP_004136090.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930-like [Cucumis sativus]
Length = 723
Score = 337 bits (865), Expect = 8e-90, Method: Compositional matrix adjust.
Identities = 194/622 (31%), Positives = 322/622 (51%), Gaps = 46/622 (7%)
Query: 32 TFPLV--LKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDM--YSKCSDFVSSRKV 87
T PL+ L+ C +++ + ++VH +K G + +Q ++ + DF +R++
Sbjct: 18 THPLISLLETCESMDQL---QQVHCQAIKKGLNANPVLQNRVMTFCCTHEYGDFQYARRL 74
Query: 88 LDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSG----C 143
DE+P ++ WN++I +SR + + EM G++ TF + G
Sbjct: 75 FDEIPEP--NLFIWNTMIRGYSRLDFPQLGVSLYLEMLRRGVKPDRYTFPFLFKGFTRDI 132
Query: 144 SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTII 203
+ G +H V K GL N + + +++ MY G+++ AR +FD + +++W II
Sbjct: 133 ALEYGRQLHGHVLKHGLQYN-VFVHTALVQMYLLCGQLDTARGVFDVCPKADVITWNMII 191
Query: 204 GGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYN 263
Y VG E+ L M V P V + ++ C+++ +L +HS +
Sbjct: 192 SAYNKVGKFEESRRLFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTGKKVHSYVKNCKVE 251
Query: 264 NEDPLDNLLVSMYTKCGDLE-------------------------------LARRVFDAV 292
+ L+N ++ MY CG+++ +AR FD +
Sbjct: 252 SNLVLENAMIDMYADCGEMDSALGIFRSMNNRDIISWTTIVSGFTNLGEIDVARNYFDKM 311
Query: 293 LEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGK 352
EK WT+MI GY + EA+ LF+ + T+V+P+E T+ + L+ACA LG+L G+
Sbjct: 312 PEKDYVSWTAMIDGYIRSNRFKEALELFRNMQATNVKPDEFTMVSVLTACAHLGALELGE 371
Query: 353 EIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHG 412
I YI N ++++ V+ +LI M+ KCG ++KA+ +F + +D W+AMI G A++G
Sbjct: 372 WIRTYIDRNKIKNDLFVRNALIDMYFKCGDVDKAESIFREMSQRDKFTWTAMIVGLAVNG 431
Query: 413 MGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEH 472
G++AL++F M L PD + Y +LSAC+H+G+VD G +F M S GIEP+I H
Sbjct: 432 HGEKALDMFSNMLKASIL-PDEITYIGVLSACTHTGLVDKGRKYFLRMTSQHGIEPNIAH 490
Query: 473 YLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLN 532
Y CLVDLL RAGR A + I MP++ + VW LL+ C + ++ E K +L L
Sbjct: 491 YGCLVDLLARAGRLKEAYEVIENMPIKANSIVWGALLAGCRVYRESDMAEMVVKQILELE 550
Query: 533 PGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSH 592
P + Y+L+ N++ + W + R +M D+ + K PG S +E++G V FVAGDRSH
Sbjct: 551 PDNGAVYVLLCNIYAACKRWNDLRELRQMMMDKGIKKTPGCSLIEMNGRVHEFVAGDRSH 610
Query: 593 HLSVDIRKTLKELHIKLLEAGY 614
+ +I L ++ L AGY
Sbjct: 611 PQTKNIDAKLDKMTQDLKLAGY 632
Score = 212 bits (540), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 152/530 (28%), Positives = 260/530 (49%), Gaps = 59/530 (11%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MIR + + +S Y ML+ GV + +TFP + K ++ G+++H HVLK G
Sbjct: 89 MIRGYSRLDFPQLGVSLYLEMLRRGVKPDRYTFPFLFKGFTRDIALEYGRQLHGHVLKHG 148
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEA--- 117
Q + FV T L+ MY C ++R V D P V++WN IISA+++ +E+
Sbjct: 149 LQYNVFVHTALVQMYLLCGQLDTARGVFDVCPK--ADVITWNMIISAYNKVGKFEESRRL 206
Query: 118 ILVLKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMS 173
LV+++ VL + T V V+S CS R G +H V + +N + L N+++
Sbjct: 207 FLVMEDKQVLP---TTVTLVLVLSACSKLKDLRTGKKVHSYVKNCKVESNLV-LENAMID 262
Query: 174 MYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVN-------------------- 213
MYA G+++ A IF + I+SWTTI+ G+ N+G ++
Sbjct: 263 MYADCGEMDSALGIFRSMNNRDIISWTTIVSGFTNLGEIDVARNYFDKMPEKDYVSWTAM 322
Query: 214 -----------EAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGY 262
EA L M+ +V PD ++++ CA +G L L + + + ++
Sbjct: 323 IDGYIRSNRFKEALELFRNMQATNVKPDEFTMVSVLTACAHLGALELGEWIRTYIDRNKI 382
Query: 263 NNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKR 322
N+ + N L+ MY KCGD++ A +F + ++ F WT+MI G A G+ +A+++F
Sbjct: 383 KNDLFVRNALIDMYFKCGDVDKAESIFREMSQRDKFTWTAMIVGLAVNGHGEKALDMFSN 442
Query: 323 LLKTSVRPNEATLATTLSACAELGSLSKGKE-IEEYIVLNGLESNRQVQTSLIHMFSKCG 381
+LK S+ P+E T LSAC G + KG++ +G+E N L+ + ++ G
Sbjct: 443 MLKASILPDEITYIGVLSACTHTGLVDKGRKYFLRMTSQHGIEPNIAHYGCLVDLLARAG 502
Query: 382 RINKAKEVFERVPDK-DLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPD----AVV 436
R+ +A EV E +P K + VW A++ G ++ D A + ++ + L+PD V+
Sbjct: 503 RLKEAYEVIENMPIKANSIVWGALLAGCRVYRESDMAEMV---VKQILELEPDNGAVYVL 559
Query: 437 YTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRF 486
+I +AC + L + M + GI+ + L+++ GR F
Sbjct: 560 LCNIYAACKRW----NDLRELRQMMMDKGIKKTPG--CSLIEMNGRVHEF 603
>gi|224137958|ref|XP_002322694.1| predicted protein [Populus trichocarpa]
gi|222867324|gb|EEF04455.1| predicted protein [Populus trichocarpa]
Length = 586
Score = 337 bits (865), Expect = 8e-90, Method: Compositional matrix adjust.
Identities = 180/503 (35%), Positives = 282/503 (56%), Gaps = 6/503 (1%)
Query: 124 MWVLGLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFG 179
M + G E+ + +++ C + R+G +H + K L + L+ ++ +Y K
Sbjct: 1 MAIQGPEIKFDGYNMLLNECVNKRAVREGQRVHAHMIKTCYLP-PVYLSTRLIILYTKCE 59
Query: 180 KVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLIL 239
+ AR +FDE+ E ++VSWT +I GY G +EA L QM R P+ F ++
Sbjct: 60 CLGCARHVFDEMRERNVVSWTAMISGYSQRGFASEALHLFVQMLRSDTEPNEFTFATVLS 119
Query: 240 GCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFL 299
C L +HS + K Y N + + L+ MY K G + AR VF+ + E+ V
Sbjct: 120 SCTGFSGFELGRQIHSHIFKRNYENHIFVGSSLLDMYAKAGRIHEARGVFECLPERDVVS 179
Query: 300 WTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIV 359
T++I GYAQLG EA+ LF RL + + N T A+ L+A + L +L GK++ +++
Sbjct: 180 CTAIISGYAQLGLDEEALELFCRLQREGMSSNYVTYASLLTALSGLAALDHGKQVHSHVL 239
Query: 360 LNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALN 419
L +Q SLI M+SKCG +N A+++F +P + + W+AM+ GY+ HG G + +
Sbjct: 240 RCELPFYVVLQNSLIDMYSKCGNLNYARKIFNNMPVRTVISWNAMLVGYSKHGKGIEVVK 299
Query: 420 LFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFG-IEPSIEHYLCLVD 478
LF M+ +KPD+V + ++LS CSH G+ D GL F M + IE IEHY C++D
Sbjct: 300 LFKLMREENKVKPDSVTFLAVLSGCSHGGLEDKGLEMFDEMMNGGDEIEAGIEHYGCVID 359
Query: 479 LLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGN 538
LLGRAGR + A + I +MP E A +W LL AC H N +GE+ LL + P + GN
Sbjct: 360 LLGRAGRVEEAFELIKKMPFEPTAAIWGSLLGACRVHSNTNIGEFVGCRLLEIEPENAGN 419
Query: 539 YILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDI 598
Y++++NL+ SAG W++ R LM ++ + KEPG S +E+D ++ F A DRSH ++
Sbjct: 420 YVILSNLYASAGRWEDVRNVRELMMEKAVIKEPGRSWIELDQTIHTFYASDRSHPRREEV 479
Query: 599 RKTLKELHIKLLEAGYIAEADIV 621
++EL +K E+GY+ + V
Sbjct: 480 FLKVRELLVKFKESGYVPDQSCV 502
Score = 198 bits (504), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 117/387 (30%), Positives = 214/387 (55%), Gaps = 11/387 (2%)
Query: 33 FPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMP 92
+ ++L C N ++ +G+RVH+H++K + ++ T LI +Y+KC +R V DEM
Sbjct: 13 YNMLLNECVNKRAVREGQRVHAHMIKTCYLPPVYLSTRLIILYTKCECLGCARHVFDEM- 71
Query: 93 VRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCS----FRQG 148
R R+VVSW ++IS +S+ EA+ + +M E + TF +V+S C+ F G
Sbjct: 72 -RERNVVSWTAMISGYSQRGFASEALHLFVQMLRSDTEPNEFTFATVLSSCTGFSGFELG 130
Query: 149 ISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVN 208
+H ++K N I + +S++ MYAK G+++EAR +F+ + E +VS T II GY
Sbjct: 131 RQIHSHIFKRN-YENHIFVGSSLLDMYAKAGRIHEARGVFECLPERDVVSCTAIISGYAQ 189
Query: 209 VGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPL 268
+G EA L +++R ++ + V + +L+ + + L +HS +L+ L
Sbjct: 190 LGLDEEALELFCRLQREGMSSNYVTYASLLTALSGLAALDHGKQVHSHVLRCELPFYVVL 249
Query: 269 DNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLL-KTS 327
N L+ MY+KCG+L AR++F+ + ++V W +M+ GY++ G E V LFK + +
Sbjct: 250 QNSLIDMYSKCGNLNYARKIFNNMPVRTVISWNAMLVGYSKHGKGIEVVKLFKLMREENK 309
Query: 328 VRPNEATLATTLSACAELGSLSKGKEIEEYIVLNG--LESNRQVQTSLIHMFSKCGRINK 385
V+P+ T LS C+ G KG E+ + ++ G +E+ + +I + + GR+ +
Sbjct: 310 VKPDSVTFLAVLSGCSHGGLEDKGLEMFDEMMNGGDEIEAGIEHYGCVIDLLGRAGRVEE 369
Query: 386 AKEVFERVP-DKDLAVWSAMINGYAIH 411
A E+ +++P + A+W +++ +H
Sbjct: 370 AFELIKKMPFEPTAAIWGSLLGACRVH 396
Score = 129 bits (324), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 90/318 (28%), Positives = 156/318 (49%), Gaps = 19/318 (5%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI + G E L + ML++ N FTF VL +C + G+++HSH+ K
Sbjct: 82 MISGYSQRGFASEALHLFVQMLRSDTEPNEFTFATVLSSCTGFSGFELGRQIHSHIFKRN 141
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
++ FV + L+DMY+K +R V + +P R VVS +IIS +++ L++EA+ +
Sbjct: 142 YENHIFVGSSLLDMYAKAGRIHEARGVFECLPE--RDVVSCTAIISGYAQLGLDEEALEL 199
Query: 121 LKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIP----LANSVM 172
+ G+ + T+ S+++ S G +H V L E+P L NS++
Sbjct: 200 FCRLQREGMSSNYVTYASLLTALSGLAALDHGKQVHSHV-----LRCELPFYVVLQNSLI 254
Query: 173 SMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMS-VTPDL 231
MY+K G +N AR IF+ + +++SW ++ GY G E L MR + V PD
Sbjct: 255 DMYSKCGNLNYARKIFNNMPVRTVISWNAMLVGYSKHGKGIEVVKLFKLMREENKVKPDS 314
Query: 232 VVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNL--LVSMYTKCGDLELARRVF 289
V FL ++ GC+ G L M ++ G E +++ ++ + + G +E A +
Sbjct: 315 VTFLAVLSGCSHGGLEDKGLEMFDEMMNGGDEIEAGIEHYGCVIDLLGRAGRVEEAFELI 374
Query: 290 DAV-LEKSVFLWTSMIGG 306
+ E + +W S++G
Sbjct: 375 KKMPFEPTAAIWGSLLGA 392
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 78/287 (27%), Positives = 135/287 (47%), Gaps = 33/287 (11%)
Query: 12 EETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGL 71
EE L + + + G+ N T+ +L A + + ++ GK+VHSHVL+ +Q L
Sbjct: 194 EEALELFCRLQREGMSSNYVTYASLLTALSGLAALDHGKQVHSHVLRCELPFYVVLQNSL 253
Query: 72 IDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLG-LE 130
IDMYSKC + +RK+ + MPV R+V+SWN+++ +S+ E + + K M ++
Sbjct: 254 IDMYSKCGNLNYARKIFNNMPV--RTVISWNAMLVGYSKHGKGIEVVKLFKLMREENKVK 311
Query: 131 LSASTFVSVVSGCSFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDE 190
+ TF++V+SGCS GL + + + + +M+ DE
Sbjct: 312 PDSVTFLAVLSGCSHG------------GLEDKGLEMFDEMMNG-------------GDE 346
Query: 191 IGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLA 250
I E I + +I G V EAF L +++M P ++ +L+ C N +
Sbjct: 347 I-EAGIEHYGCVIDLLGRAGRVEEAFEL---IKKMPFEPTAAIWGSLLGACRVHSNTNIG 402
Query: 251 LSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSV 297
+ LL+ N +L ++Y G E R V + ++EK+V
Sbjct: 403 EFVGCRLLEIEPENAGNY-VILSNLYASAGRWEDVRNVRELMMEKAV 448
>gi|357446017|ref|XP_003593286.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355482334|gb|AES63537.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 622
Score = 337 bits (865), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 187/587 (31%), Positives = 320/587 (54%), Gaps = 14/587 (2%)
Query: 2 IRNSTNNGSFEETLSTYSSMLQTGVHGNS--FTFPLVLKACANINSIWDGKRVHSHVLKV 59
I+ + G + +TL ++ + + H NS F P V+KAC+ + G ++H
Sbjct: 36 IKTLVSMGLYHQTLQFFTQLHFSAHHFNSIPFVLPSVIKACSFTHFHAFGTQLHCLAFIT 95
Query: 60 GFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAIL 119
G D V +I MY+K D S+R+V D MP R ++WNS+I+A+ + L EA+
Sbjct: 96 GSYTDPIVSNSIISMYAKFFDIESARQVFDTMP--HRDTITWNSMINAYLQNGLLVEALQ 153
Query: 120 VLKEMWVLGLELSASTFVSVVSGCS------FRQGISMHCCVYKLGLL--NNEIPLANSV 171
+LK+ + LG S+VS C +R G +H V G + + + L+ +
Sbjct: 154 MLKDFYFLGFLPKPELLASMVSMCGREMDLGWRIGRQIHGLVVVDGRIRIQHSVFLSTAF 213
Query: 172 MSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDL 231
+ Y + G ARS+FDE+ + VSWT +I G N + + A +M+ V+P+
Sbjct: 214 VDFYFRCGDSLMARSVFDEMEVKNEVSWTAVISGCANNQDYDVALACYREMQVEGVSPNR 273
Query: 232 VVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGD-LELARRVFD 290
V + L+ CA+ G + +H + G+++ L+ +Y +CG L LA R+F+
Sbjct: 274 VTLIALLAACARPGFVKYGKEIHGYAFRRGFDSCHSFSPALIYLYCECGQSLHLAERIFE 333
Query: 291 AVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSK 350
+ V LW+S+IG YA+ G +A+ LF ++ PN TL +SAC L S
Sbjct: 334 GSSLRDVVLWSSIIGSYARRGESDKALKLFNKMRTEETEPNYVTLLAVISACTNLSSFKH 393
Query: 351 GKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAI 410
G I YI+ G+ + V +LI+M++KCG ++ ++++F +P +D W++MI+ Y +
Sbjct: 394 GGVIHGYILKFGIGFSIFVCNALINMYAKCGSLDDSRKIFLEMPSRDSVTWNSMISAYGL 453
Query: 411 HGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSI 470
HG G+QAL FY+M+ G+K DAV + ++LSAC+H+G+V +G F+ + ++ I +I
Sbjct: 454 HGYGEQALQHFYEMKE-RGVKLDAVTFLAVLSACNHAGLVTEGQQLFEQVNADCEIPITI 512
Query: 471 EHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLT 530
EHY CL+DL GR+G+ + AL+ + MP++ A++W+ L+S+C H +++ E + L+
Sbjct: 513 EHYACLIDLHGRSGKLEDALEILRTMPMKPSARIWSSLVSSCKLHGRLDIAESLSSQLIR 572
Query: 531 LNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVE 577
P + +Y L++ + G W + R M +RL K G+S++E
Sbjct: 573 SEPNNAASYTLLSMIHAEKGRWLDIEQVRETMKLQRLRKCYGFSRIE 619
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 100/374 (26%), Positives = 173/374 (46%), Gaps = 17/374 (4%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+I NN ++ L+ Y M GV N T +L ACA + GK +H + + G
Sbjct: 244 VISGCANNQDYDVALACYREMQVEGVSPNRVTLIALLAACARPGFVKYGKEIHGYAFRRG 303
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F LI +Y +C + + + E LR VV W+SII +++R +D+A+ +
Sbjct: 304 FDSCHSFSPALIYLYCECGQSLHLAERIFEGS-SLRDVVLWSSIIGSYARRGESDKALKL 362
Query: 121 LKEMWVLGLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
+M E + T ++V+S C SF+ G +H + K G + I + N++++MYA
Sbjct: 363 FNKMRTEETEPNYVTLLAVISACTNLSSFKHGGVIHGYILKFG-IGFSIFVCNALINMYA 421
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K G ++++R IF E+ V+W ++I Y G +A +M+ V D V FL
Sbjct: 422 KCGSLDDSRKIFLEMPSRDSVTWNSMISAYGLHGYGEQALQHFYEMKERGVKLDAVTFLA 481
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLD----NLLVSMYTKCGDLELARRVFDAV 292
++ C G L L + + E P+ L+ ++ + G LE A + +
Sbjct: 482 VLSACNHAG---LVTEGQQLFEQVNADCEIPITIEHYACLIDLHGRSGKLEDALEILRTM 538
Query: 293 -LEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSAC-AELGSLSK 350
++ S +W+S++ G A +L +L+++ PN A T LS AE G
Sbjct: 539 PMKPSARIWSSLVSSCKLHGRLDIAESLSSQLIRS--EPNNAASYTLLSMIHAEKGRWLD 596
Query: 351 GKEIEEYIVLNGLE 364
+++ E + L L
Sbjct: 597 IEQVRETMKLQRLR 610
>gi|302801269|ref|XP_002982391.1| hypothetical protein SELMODRAFT_116290 [Selaginella moellendorffii]
gi|300149983|gb|EFJ16636.1| hypothetical protein SELMODRAFT_116290 [Selaginella moellendorffii]
Length = 779
Score = 337 bits (865), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 185/555 (33%), Positives = 314/555 (56%), Gaps = 17/555 (3%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI +G +E L M Q G+ T+ +L AC++ + +GK +H V+ +G
Sbjct: 229 MISGYAQSGDCKEGLRCLWRMQQDGLSPTKVTYATLLNACSSEEDLGEGKSIHRSVVDMG 288
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+D V++ L+ MY KC ++ E V R+ ++WN+II A++R + +A+
Sbjct: 289 LDRDEVVKSFLLGMYGKCGSLEDVKRSSCE--VHERNTIAWNTIIGAYARYSDHFQALRS 346
Query: 121 LKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
++M + G++ A TFV ++ CS QGI +H + +LG I + NS+ +MYA
Sbjct: 347 FQQMQLEGVKADAVTFVLMLGTCSSPAHLAQGILLHDWISQLGF--ESIIVHNSLTAMYA 404
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K G ++ AR +F+E+ + VSW +++ + G +A +M+ PD V ++
Sbjct: 405 KCGSLDAARKMFEEMPSRNSVSWNSLMSAAIQHGCHADAHKFFQRMKLEGSRPDEVTCIS 464
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
++ C + N S+H ++++SG++ + N L+ MY K GD E AR VFDA+ E++
Sbjct: 465 MLDACTKQANAKEGSSIHQMVVESGFDKRTGVANALIFMYAKLGDHEAARNVFDAMAERN 524
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAEL-GSLSKGKEIE 355
W +++ Y + G +AV +F K V ++ T L AC+ L G L+ GK I
Sbjct: 525 TVSWNTILAAYVEKGLNRDAVEMF---WKMDVARDKVTYVAALDACSGLAGGLAHGKLIH 581
Query: 356 EYIVLNGLESNR---QVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHG 412
Y++ +G SNR T+L++M+ KCG + +A+++F+ + +D+ W+++I YA H
Sbjct: 582 GYMLDHGF-SNRLDTVAATALVNMYGKCGSLQEARKIFDGMLHRDVVTWTSLIVAYAQHS 640
Query: 413 MGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEH 472
+QAL L M+ EG+K D VV+ SILS C HSG++++G +F SM ++GI P +EH
Sbjct: 641 EIEQALKLVKIMEQ-EGVKVDDVVFLSILSGCDHSGLLEEGCKYFVSMIDDYGISPRLEH 699
Query: 473 YLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLN 532
Y C++D+LGRAG DLA K + +P ++VW LL+AC H N E G+ AA+ + L+
Sbjct: 700 YNCIIDVLGRAGHLDLAEKLVDRLPSRSDSKVWMTLLAACRMHGNPERGKRAARRITLLD 759
Query: 533 PGSTGNYILMANLFT 547
P Y++++N++T
Sbjct: 760 PSIPAAYVVLSNIYT 774
Score = 225 bits (574), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 139/510 (27%), Positives = 260/510 (50%), Gaps = 12/510 (2%)
Query: 4 NSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQ 63
NS N+ + L Y M GV +S TF LKAC ++ DG++VH+H+ ++G +
Sbjct: 35 NSENDAV--QALELYKRMQLEGVRPDSVTFVTCLKACTVEGALGDGRKVHAHIRELGLET 92
Query: 64 DAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSR-ACLNDEAILVLK 122
D + LI+MY KC + ++ M +VVSW S+I ++ L E++L+ +
Sbjct: 93 DIYAANALINMYGKCRSPEDAFQLFSRMESP--NVVSWTSVIGNFAQYGHLGRESVLLFR 150
Query: 123 EMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVN 182
+M + G+ + T V+V+ C+ G +H V + G+ + + L N+++ MY K G V+
Sbjct: 151 KMELEGIRPNLITMVAVLRACNLTDGRQVHGYVLEAGM-SLDTSLGNALVDMYCKTGGVD 209
Query: 183 EARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCA 242
EA + E+ + ++SW +I GY G+ E +M++ ++P V + L+ C+
Sbjct: 210 EADVVLREMPKRDVISWNIMISGYAQSGDCKEGLRCLWRMQQDGLSPTKVTYATLLNACS 269
Query: 243 QVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTS 302
+L S+H ++ G + ++ + + L+ MY KCG LE +R V E++ W +
Sbjct: 270 SEEDLGEGKSIHRSVVDMGLDRDEVVKSFLLGMYGKCGSLEDVKRSSCEVHERNTIAWNT 329
Query: 303 MIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNG 362
+IG YA+ +A+ F+++ V+ + T L C+ L++G + ++I G
Sbjct: 330 IIGAYARYSDHFQALRSFQQMQLEGVKADAVTFVLMLGTCSSPAHLAQGILLHDWISQLG 389
Query: 363 LESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFY 422
ES V SL M++KCG ++ A+++FE +P ++ W+++++ HG A F
Sbjct: 390 FESI-IVHNSLTAMYAKCGSLDAARKMFEEMPSRNSVSWNSLMSAAIQHGCHADAHKFFQ 448
Query: 423 KMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKS-MQSNFGIEPSIEHYLCLVDLLG 481
+M+ +EG +PD V S+L AC+ +G S + ++S F + + L+ +
Sbjct: 449 RMK-LEGSRPDEVTCISMLDACTKQANAKEGSSIHQMVVESGFDKRTGVAN--ALIFMYA 505
Query: 482 RAGRFDLALKTIHEMPVEVQAQVWAPLLSA 511
+ G + A + + + E W +L+A
Sbjct: 506 KLGDHE-AARNVFDAMAERNTVSWNTILAA 534
Score = 155 bits (393), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 87/289 (30%), Positives = 154/289 (53%), Gaps = 7/289 (2%)
Query: 174 MYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGN-VNEAFGLCNQMRRMSVTPDLV 232
MY K G ++ A +F ++ + +W+ ++G Y N N +A L +M+ V PD V
Sbjct: 1 MYGKCGDLDAASEVFGKLDPLHVAAWSALLGAYANSENDAVQALELYKRMQLEGVRPDSV 60
Query: 233 VFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAV 292
F+ + C G L +H+ + + G + N L++MY KC E A ++F +
Sbjct: 61 TFVTCLKACTVEGALGDGRKVHAHIRELGLETDIYAANALINMYGKCRSPEDAFQLFSRM 120
Query: 293 LEKSVFLWTSMIGGYAQLGY-PSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKG 351
+V WTS+IG +AQ G+ E+V LF+++ +RPN T+ L AC +L+ G
Sbjct: 121 ESPNVVSWTSVIGNFAQYGHLGRESVLLFRKMELEGIRPNLITMVAVLRAC----NLTDG 176
Query: 352 KEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIH 411
+++ Y++ G+ + + +L+ M+ K G +++A V +P +D+ W+ MI+GYA
Sbjct: 177 RQVHGYVLEAGMSLDTSLGNALVDMYCKTGGVDEADVVLREMPKRDVISWNIMISGYAQS 236
Query: 412 GMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSM 460
G + L ++MQ +GL P V Y ++L+ACS + +G S +S+
Sbjct: 237 GDCKEGLRCLWRMQQ-DGLSPTKVTYATLLNACSSEEDLGEGKSIHRSV 284
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 70/232 (30%), Positives = 124/232 (53%), Gaps = 22/232 (9%)
Query: 275 MYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPS-EAVNLFKRLLKTSVRPNEA 333
MY KCGDL+ A VF + V W++++G YA + +A+ L+KR+ VRP+
Sbjct: 1 MYGKCGDLDAASEVFGKLDPLHVAAWSALLGAYANSENDAVQALELYKRMQLEGVRPDSV 60
Query: 334 TLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERV 393
T T L AC G+L G+++ +I GLE++ +LI+M+ KC A ++F R+
Sbjct: 61 TFVTCLKACTVEGALGDGRKVHAHIRELGLETDIYAANALINMYGKCRSPEDAFQLFSRM 120
Query: 394 PDKDLAVWSAMINGYAIHG-MGDQALNLFYKMQHVEGLKPDAVVYTSILSACS------- 445
++ W+++I +A +G +G +++ LF KM+ +EG++P+ + ++L AC+
Sbjct: 121 ESPNVVSWTSVIGNFAQYGHLGRESVLLFRKME-LEGIRPNLITMVAVLRACNLTDGRQV 179
Query: 446 HSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMP 497
H +++ G+S S+ + LVD+ + G D A + EMP
Sbjct: 180 HGYVLEAGMSLDTSLGN------------ALVDMYCKTGGVDEADVVLREMP 219
>gi|359492597|ref|XP_002282781.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g04860-like [Vitis vinifera]
Length = 724
Score = 337 bits (865), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 189/578 (32%), Positives = 323/578 (55%), Gaps = 6/578 (1%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+I + NG + L + ML+ G T ++ +C + I+ GK +H +K G
Sbjct: 125 LICGYSRNGYDYDALEVFVQMLREGFPPCQRTLVGLVPSCGRPDIIFQGKAIHGFGIKSG 184
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
D V+ L MY+KC+D ++ + +E + ++ VSWN++I A+ + L DEA+LV
Sbjct: 185 LDLDCRVKNALTSMYAKCADLQAAEVLFEE--IFEKTEVSWNTMIGAYGQNGLFDEAMLV 242
Query: 121 LKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGK 180
K+M +E++ T +S++S + S HC V K G + + S++ YA G
Sbjct: 243 FKQMQKERVEVNYVTIISLLSANAHLD--STHCYVIKTGFATDA-SVITSLVCSYAGCGN 299
Query: 181 VNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILG 240
+ A +++ + + ++VS T +I GY GN+ QM ++ + PD V ++++ G
Sbjct: 300 IESAGLLYNLMPQRNLVSLTAMISGYAEKGNMGLVVECFTQMLQLKMKPDAVAMVSILHG 359
Query: 241 CAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLW 300
+ L +H+ LK+G + + N L+SMY+K GD+E +F + EK + W
Sbjct: 360 FTDPTFIGSGLGIHAYGLKTGLCADCLVVNGLISMYSKFGDIETVFSLFSEMGEKQLISW 419
Query: 301 TSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVL 360
S+I Q+G S+A+ LF ++ P+ T+A+ L+ C+E+G L G+ + Y++
Sbjct: 420 NSVISACIQVGRTSDAMELFCQMRMYGHSPDAITIASLLAGCSEVGFLQFGERLHNYVLR 479
Query: 361 NGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNL 420
N L+ ++T+L+ M+ KCGR+ A+ VF+ + + LA W+ MI+GY + G +AL+
Sbjct: 480 NNLDMEDFLETALVDMYIKCGRLESAERVFKSIKEPCLATWNTMISGYGLSGHEHRALSC 539
Query: 421 FYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLL 480
+ +MQ +GLKPD + + +LSAC+H G+V +G +F+SM+ +FG+ P ++H C+VDLL
Sbjct: 540 YSEMQE-QGLKPDRITFLGVLSACTHGGLVWEGKRYFRSMREDFGMIPGLQHNACMVDLL 598
Query: 481 GRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYI 540
RAG + A+ + M VE + +W LL++C H ++LGE AK LL L+ S G Y+
Sbjct: 599 SRAGFLEEAVIFVKNMEVEPDSAIWGALLTSCCIHQELKLGECLAKRLLLLDYYSGGLYV 658
Query: 541 LMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEI 578
LM+NL+ S G W + A R +M D G S +E+
Sbjct: 659 LMSNLYASKGRWDDVARVRKMMKDTGGDGSSGISLIEV 696
Score = 185 bits (470), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 131/462 (28%), Positives = 230/462 (49%), Gaps = 20/462 (4%)
Query: 42 NINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSW 101
+ N+ + ++ +H+ K GF Q ++ T +D Y K ++ + +EMP R VVSW
Sbjct: 65 DANTKIEANQIQTHLRKSGFNQYVYLTTAFLDFYGKLGCIYYAQHLFEEMP--RRDVVSW 122
Query: 102 NSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYK 157
N++I +SR + +A+ V +M G T V +V C QG ++H K
Sbjct: 123 NALICGYSRNGYDYDALEVFVQMLREGFPPCQRTLVGLVPSCGRPDIIFQGKAIHGFGIK 182
Query: 158 LGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFG 217
G L+ + + N++ SMYAK + A +F+EI E + VSW T+IG Y G +EA
Sbjct: 183 SG-LDLDCRVKNALTSMYAKCADLQAAEVLFEEIFEKTEVSWNTMIGAYGQNGLFDEAML 241
Query: 218 LCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYT 277
+ QM++ V + V ++L+ A + S H ++K+G+ + + LV Y
Sbjct: 242 VFKQMQKERVEVNYVTIISLLSANAHLD------STHCYVIKTGFATDASVITSLVCSYA 295
Query: 278 KCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLAT 337
CG++E A +++ + ++++ T+MI GYA+ G V F ++L+ ++P+ + +
Sbjct: 296 GCGNIESAGLLYNLMPQRNLVSLTAMISGYAEKGNMGLVVECFTQMLQLKMKPDAVAMVS 355
Query: 338 TLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKD 397
L + + G I Y + GL ++ V LI M+SK G I +F + +K
Sbjct: 356 ILHGFTDPTFIGSGLGIHAYGLKTGLCADCLVVNGLISMYSKFGDIETVFSLFSEMGEKQ 415
Query: 398 LAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFF 457
L W+++I+ G A+ LF +M+ + G PDA+ S+L+ CS G + G
Sbjct: 416 LISWNSVISACIQVGRTSDAMELFCQMR-MYGHSPDAITIASLLAGCSEVGFLQFGERLH 474
Query: 458 KS-MQSNFGIEPSIEHYLCLVDLLGRAGRFDLA---LKTIHE 495
+++N +E +E LVD+ + GR + A K+I E
Sbjct: 475 NYVLRNNLDMEDFLE--TALVDMYIKCGRLESAERVFKSIKE 514
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 105/362 (29%), Positives = 171/362 (47%), Gaps = 25/362 (6%)
Query: 161 LNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCN 220
N + L + + Y K G + A+ +F+E+ +VSW +I GY G +A +
Sbjct: 84 FNQYVYLTTAFLDFYGKLGCIYYAQHLFEEMPRRDVVSWNALICGYSRNGYDYDALEVFV 143
Query: 221 QMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCG 280
QM R P + L+ C + +F ++H +KSG + + + N L SMY KC
Sbjct: 144 QMLREGFPPCQRTLVGLVPSCGRPDIIFQGKAIHGFGIKSGLDLDCRVKNALTSMYAKCA 203
Query: 281 DLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLS 340
DL+ A +F+ + EK+ W +MIG Y Q G EA+ +FK++ K V N T+ + LS
Sbjct: 204 DLQAAEVLFEEIFEKTEVSWNTMIGAYGQNGLFDEAMLVFKQMQKERVEVNYVTIISLLS 263
Query: 341 ACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAV 400
A A L S Y++ G ++ V TSL+ ++ CG I A ++ +P ++L
Sbjct: 264 ANAHLDS------THCYVIKTGFATDASVITSLVCSYAGCGNIESAGLLYNLMPQRNLVS 317
Query: 401 WSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSM 460
+AMI+GYA G + F +M ++ +KPDAV SIL + + GL
Sbjct: 318 LTAMISGYAEKGNMGLVVECFTQMLQLK-MKPDAVAMVSILHGFTDPTFIGSGLGIHA-- 374
Query: 461 QSNFGIEPSIEHYLC--------LVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSAC 512
+G++ LC L+ + + G + EM E Q W ++SAC
Sbjct: 375 ---YGLKTG----LCADCLVVNGLISMYSKFGDIETVFSLFSEMG-EKQLISWNSVISAC 426
Query: 513 MK 514
++
Sbjct: 427 IQ 428
>gi|115461454|ref|NP_001054327.1| Os04g0686500 [Oryza sativa Japonica Group]
gi|38345824|emb|CAE01858.2| OSJNBa0070M12.7 [Oryza sativa Japonica Group]
gi|113565898|dbj|BAF16241.1| Os04g0686500 [Oryza sativa Japonica Group]
gi|215766744|dbj|BAG98972.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222629815|gb|EEE61947.1| hypothetical protein OsJ_16704 [Oryza sativa Japonica Group]
Length = 690
Score = 337 bits (865), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 192/590 (32%), Positives = 317/590 (53%), Gaps = 11/590 (1%)
Query: 36 VLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRL 95
+L+A A +S+ G ++H+ ++K+GF D + LIDMY+KC + +V D MP R
Sbjct: 10 LLRASARGSSLRGGVQLHAALMKLGFGSDTMLNNNLIDMYAKCGKLHMAGEVFDGMPER- 68
Query: 96 RSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCS--FRQGISMHC 153
+VVSW +++ E + + EM G + T + + C R G+ +H
Sbjct: 69 -NVVSWTALMVGFLHHGEARECLRLFGEMRGSGTSPNEFTLSATLKACGGGTRAGVQIHG 127
Query: 154 CVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVN 213
+ G +++ +ANS++ MY+K +AR +FD I ++ +W ++I GY + G
Sbjct: 128 VCVRTGFEGHDV-VANSLVVMYSKGRWTGDARRVFDVIPSRNLATWNSMISGYAHAGQGR 186
Query: 214 EAFGLCNQM-RRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYN--NEDPLDN 270
++ + +M RR PD F +L+ C+ +G +H+ + G + + L
Sbjct: 187 DSLLVFREMQRRHDEQPDEFTFASLLKACSGLGAAREGAQVHAAMAVRGVSPASNAILAG 246
Query: 271 LLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRP 330
L+ +Y KC L +A +VFD + ++ WT++I G+AQ G EA+ LF+R + VR
Sbjct: 247 ALLDVYVKCHRLPVAMQVFDGLERRNAIQWTTVIVGHAQEGQVKEAMCLFRRFWSSGVRA 306
Query: 331 NEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVF 390
+ L++ ++ A+ + +GK++ Y + V SL+ M+ KCG +A F
Sbjct: 307 DGHVLSSVVAVFADFALVEQGKQVHCYTAKTPAGLDVSVANSLVDMYLKCGLTGEAGRRF 366
Query: 391 ERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMV 450
+P +++ W+AMING HG G +A++LF +MQ EG++ D V Y ++LSACSHSG+V
Sbjct: 367 REMPARNVVSWTAMINGVGKHGHGREAIDLFEEMQE-EGVEADEVAYLALLSACSHSGLV 425
Query: 451 DDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLS 510
D+ +F + + + P EHY C+VDLLGRAG A + I MP+E VW LLS
Sbjct: 426 DECRRYFSRICQDRRMRPKAEHYACMVDLLGRAGELREAKELILSMPMEPTVGVWQTLLS 485
Query: 511 ACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKE 570
AC H +V +G LL ++ + NY++++N+ AG W+E RG M + L K+
Sbjct: 486 ACRVHKDVAVGREVGDVLLAVDGDNPVNYVMLSNILAEAGEWRECQGIRGAMRRKGLRKQ 545
Query: 571 PGWSQVEIDGSVQVFV-AGDRSHHLSVDIRKTLKELHIKLLEA-GYIAEA 618
G S E+D V F GD +H + DIR+ L+E+ ++ E GY +A
Sbjct: 546 GGCSWTEVDKEVHFFYGGGDDAHPQAGDIRRALREVEARMRERLGYSGDA 595
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 110/414 (26%), Positives = 194/414 (46%), Gaps = 14/414 (3%)
Query: 7 NNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAF 66
++G E L + M +G N FT LKAC G ++H ++ GF+
Sbjct: 82 HHGEARECLRLFGEMRGSGTSPNEFTLSATLKACGGGTRA--GVQIHGVCVRTGFEGHDV 139
Query: 67 VQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWV 126
V L+ MYSK +R+V D +P R++ +WNS+IS ++ A +++LV +EM
Sbjct: 140 VANSLVVMYSKGRWTGDARRVFDVIPS--RNLATWNSMISGYAHAGQGRDSLLVFREMQR 197
Query: 127 LGLELSAS-TFVSVVSGCS----FRQGISMHCCVYKLGL--LNNEIPLANSVMSMYAKFG 179
E TF S++ CS R+G +H + G+ +N I LA +++ +Y K
Sbjct: 198 RHDEQPDEFTFASLLKACSGLGAAREGAQVHAAMAVRGVSPASNAI-LAGALLDVYVKCH 256
Query: 180 KVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLIL 239
++ A +FD + + + WTT+I G+ G V EA L + V D V +++
Sbjct: 257 RLPVAMQVFDGLERRNAIQWTTVIVGHAQEGQVKEAMCLFRRFWSSGVRADGHVLSSVVA 316
Query: 240 GCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFL 299
A + +H K+ + + N LV MY KCG A R F + ++V
Sbjct: 317 VFADFALVEQGKQVHCYTAKTPAGLDVSVANSLVDMYLKCGLTGEAGRRFREMPARNVVS 376
Query: 300 WTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIV 359
WT+MI G + G+ EA++LF+ + + V +E LSAC+ G + + + I
Sbjct: 377 WTAMINGVGKHGHGREAIDLFEEMQEEGVEADEVAYLALLSACSHSGLVDECRRYFSRIC 436
Query: 360 LN-GLESNRQVQTSLIHMFSKCGRINKAKEVFERVP-DKDLAVWSAMINGYAIH 411
+ + + ++ + + G + +AKE+ +P + + VW +++ +H
Sbjct: 437 QDRRMRPKAEHYACMVDLLGRAGELREAKELILSMPMEPTVGVWQTLLSACRVH 490
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 85/260 (32%), Positives = 138/260 (53%), Gaps = 5/260 (1%)
Query: 236 NLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEK 295
+L+ A+ +L + +H+ L+K G+ ++ L+N L+ MY KCG L +A VFD + E+
Sbjct: 9 DLLRASARGSSLRGGVQLHAALMKLGFGSDTMLNNNLIDMYAKCGKLHMAGEVFDGMPER 68
Query: 296 SVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIE 355
+V WT+++ G+ G E + LF + + PNE TL+ TL AC G G +I
Sbjct: 69 NVVSWTALMVGFLHHGEARECLRLFGEMRGSGTSPNEFTLSATLKACG--GGTRAGVQIH 126
Query: 356 EYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGD 415
V G E + V SL+ M+SK A+ VF+ +P ++LA W++MI+GYA G G
Sbjct: 127 GVCVRTGFEGHDVVANSLVVMYSKGRWTGDARRVFDVIPSRNLATWNSMISGYAHAGQGR 186
Query: 416 QALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYL- 474
+L +F +MQ +PD + S+L ACS G +G +M G+ P+ L
Sbjct: 187 DSLLVFREMQRRHDEQPDEFTFASLLKACSGLGAAREGAQVHAAMAVR-GVSPASNAILA 245
Query: 475 -CLVDLLGRAGRFDLALKTI 493
L+D+ + R +A++
Sbjct: 246 GALLDVYVKCHRLPVAMQVF 265
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 72/254 (28%), Positives = 120/254 (47%), Gaps = 14/254 (5%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQT-GVHGNSFTFPLVLKACANINSIWDGKRVHS--HVL 57
MI + G ++L + M + + FTF +LKAC+ + + +G +VH+ V
Sbjct: 175 MISGYAHAGQGRDSLLVFREMQRRHDEQPDEFTFASLLKACSGLGAAREGAQVHAAMAVR 234
Query: 58 KVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEA 117
V +A + L+D+Y KC + +V D + R+ + W ++I H++ EA
Sbjct: 235 GVSPASNAILAGALLDVYVKCHRLPVAMQVFDGLE--RRNAIQWTTVIVGHAQEGQVKEA 292
Query: 118 ILVLKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKL--GLLNNEIPLANSV 171
+ + + W G+ SVV+ + QG +HC K GL ++ +ANS+
Sbjct: 293 MCLFRRFWSSGVRADGHVLSSVVAVFADFALVEQGKQVHCYTAKTPAGL---DVSVANSL 349
Query: 172 MSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDL 231
+ MY K G EA F E+ ++VSWT +I G G+ EA L +M+ V D
Sbjct: 350 VDMYLKCGLTGEAGRRFREMPARNVVSWTAMINGVGKHGHGREAIDLFEEMQEEGVEADE 409
Query: 232 VVFLNLILGCAQVG 245
V +L L+ C+ G
Sbjct: 410 VAYLALLSACSHSG 423
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 87/209 (41%), Gaps = 9/209 (4%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+I G +E + + +GV + V+ A+ + GK+VH + K
Sbjct: 279 VIVGHAQEGQVKEAMCLFRRFWSSGVRADGHVLSSVVAVFADFALVEQGKQVHCYTAKTP 338
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
D V L+DMY KC + + EMP R+VVSW ++I+ + EAI +
Sbjct: 339 AGLDVSVANSLVDMYLKCGLTGEAGRRFREMPA--RNVVSWTAMINGVGKHGHGREAIDL 396
Query: 121 LKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGLLNNE--IPLANSVMSMYAKF 178
+EM G+E +++++S CS G+ C Y + + P A M
Sbjct: 397 FEEMQEEGVEADEVAYLALLSACSH-SGLVDECRRYFSRICQDRRMRPKAEHYACMVDLL 455
Query: 179 GKVNEARS----IFDEIGETSIVSWTTII 203
G+ E R I E ++ W T++
Sbjct: 456 GRAGELREAKELILSMPMEPTVGVWQTLL 484
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 63/110 (57%), Gaps = 1/110 (0%)
Query: 335 LATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVP 394
+A L A A SL G ++ ++ G S+ + +LI M++KCG+++ A EVF+ +P
Sbjct: 7 IADLLRASARGSSLRGGVQLHAALMKLGFGSDTMLNNNLIDMYAKCGKLHMAGEVFDGMP 66
Query: 395 DKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSAC 444
++++ W+A++ G+ HG + L LF +M+ G P+ ++ L AC
Sbjct: 67 ERNVVSWTALMVGFLHHGEARECLRLFGEMRG-SGTSPNEFTLSATLKAC 115
>gi|218195864|gb|EEC78291.1| hypothetical protein OsI_18005 [Oryza sativa Indica Group]
Length = 690
Score = 337 bits (865), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 192/590 (32%), Positives = 317/590 (53%), Gaps = 11/590 (1%)
Query: 36 VLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRL 95
+L+A A +S+ G ++H+ ++K+GF D + LIDMY+KC + +V D MP R
Sbjct: 10 LLRASARGSSLRGGVQLHAALMKLGFGSDTMLNNNLIDMYAKCGKLHMAGEVFDGMPER- 68
Query: 96 RSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCS--FRQGISMHC 153
+VVSW +++ E + + EM G + T + + C R G+ +H
Sbjct: 69 -NVVSWTALMVGFLHHGEARECLRLFGEMRGSGTSPNEFTLSATLKACGGGTRAGVQIHG 127
Query: 154 CVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVN 213
+ G +++ +ANS++ MY+K +AR +FD I ++ +W ++I GY + G
Sbjct: 128 VCVRTGFEGHDV-VANSLVVMYSKGRWTGDARRVFDVIPSRNLATWNSMISGYAHAGQGR 186
Query: 214 EAFGLCNQM-RRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYN--NEDPLDN 270
++ + +M RR PD F +L+ C+ +G +H+ + G + + L
Sbjct: 187 DSLLVFREMQRRHDEQPDEFTFASLLKACSGLGAAREGAQVHAAMAVRGVSPASNAILAG 246
Query: 271 LLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRP 330
L+ +Y KC L +A +VFD + ++ WT++I G+AQ G EA+ LF+R + VR
Sbjct: 247 ALLDVYVKCHRLPVAMQVFDGLERRNAIQWTTVIVGHAQEGQVKEAMCLFRRFWSSGVRA 306
Query: 331 NEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVF 390
+ L++ ++ A+ + +GK++ Y + V SL+ M+ KCG +A F
Sbjct: 307 DGHVLSSVVAVFADFALVEQGKQVHCYTAKTPAGLDVSVANSLVDMYLKCGLTGEAGRRF 366
Query: 391 ERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMV 450
+P +++ W+AMING HG G +A++LF +MQ EG++ D V Y ++LSACSHSG+V
Sbjct: 367 REMPARNVVSWTAMINGVGKHGHGREAIDLFEEMQ-AEGVEADEVAYLALLSACSHSGLV 425
Query: 451 DDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLS 510
D+ +F + + + P EHY C+VDLLGRAG A + I MP+E VW LLS
Sbjct: 426 DECRRYFSRICQDRRMRPKAEHYACMVDLLGRAGELREAKELILSMPMEPTVGVWQTLLS 485
Query: 511 ACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKE 570
AC H +V +G LL ++ + NY++++N+ AG W+E RG M + L K+
Sbjct: 486 ACRVHKDVAVGREVGDVLLAVDGDNPVNYVMLSNILAEAGEWRECQGIRGAMRRKGLRKQ 545
Query: 571 PGWSQVEIDGSVQVFV-AGDRSHHLSVDIRKTLKELHIKLLEA-GYIAEA 618
G S E+D V F GD +H + DIR+ L+E+ ++ E GY +A
Sbjct: 546 GGCSWTEVDKEVHFFYGGGDDAHPQAGDIRRALREVEARMRERLGYSGDA 595
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 110/414 (26%), Positives = 193/414 (46%), Gaps = 14/414 (3%)
Query: 7 NNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAF 66
++G E L + M +G N FT LKAC G ++H ++ GF+
Sbjct: 82 HHGEARECLRLFGEMRGSGTSPNEFTLSATLKACGGGTRA--GVQIHGVCVRTGFEGHDV 139
Query: 67 VQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWV 126
V L+ MYSK +R+V D +P R++ +WNS+IS ++ A +++LV +EM
Sbjct: 140 VANSLVVMYSKGRWTGDARRVFDVIPS--RNLATWNSMISGYAHAGQGRDSLLVFREMQR 197
Query: 127 LGLELSAS-TFVSVVSGCS----FRQGISMHCCVYKLGL--LNNEIPLANSVMSMYAKFG 179
E TF S++ CS R+G +H + G+ +N I LA +++ +Y K
Sbjct: 198 RHDEQPDEFTFASLLKACSGLGAAREGAQVHAAMAVRGVSPASNAI-LAGALLDVYVKCH 256
Query: 180 KVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLIL 239
++ A +FD + + + WTT+I G+ G V EA L + V D V +++
Sbjct: 257 RLPVAMQVFDGLERRNAIQWTTVIVGHAQEGQVKEAMCLFRRFWSSGVRADGHVLSSVVA 316
Query: 240 GCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFL 299
A + +H K+ + + N LV MY KCG A R F + ++V
Sbjct: 317 VFADFALVEQGKQVHCYTAKTPAGLDVSVANSLVDMYLKCGLTGEAGRRFREMPARNVVS 376
Query: 300 WTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIV 359
WT+MI G + G+ EA++LF+ + V +E LSAC+ G + + + I
Sbjct: 377 WTAMINGVGKHGHGREAIDLFEEMQAEGVEADEVAYLALLSACSHSGLVDECRRYFSRIC 436
Query: 360 LN-GLESNRQVQTSLIHMFSKCGRINKAKEVFERVP-DKDLAVWSAMINGYAIH 411
+ + + ++ + + G + +AKE+ +P + + VW +++ +H
Sbjct: 437 QDRRMRPKAEHYACMVDLLGRAGELREAKELILSMPMEPTVGVWQTLLSACRVH 490
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 85/260 (32%), Positives = 138/260 (53%), Gaps = 5/260 (1%)
Query: 236 NLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEK 295
+L+ A+ +L + +H+ L+K G+ ++ L+N L+ MY KCG L +A VFD + E+
Sbjct: 9 DLLRASARGSSLRGGVQLHAALMKLGFGSDTMLNNNLIDMYAKCGKLHMAGEVFDGMPER 68
Query: 296 SVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIE 355
+V WT+++ G+ G E + LF + + PNE TL+ TL AC G G +I
Sbjct: 69 NVVSWTALMVGFLHHGEARECLRLFGEMRGSGTSPNEFTLSATLKACG--GGTRAGVQIH 126
Query: 356 EYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGD 415
V G E + V SL+ M+SK A+ VF+ +P ++LA W++MI+GYA G G
Sbjct: 127 GVCVRTGFEGHDVVANSLVVMYSKGRWTGDARRVFDVIPSRNLATWNSMISGYAHAGQGR 186
Query: 416 QALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYL- 474
+L +F +MQ +PD + S+L ACS G +G +M G+ P+ L
Sbjct: 187 DSLLVFREMQRRHDEQPDEFTFASLLKACSGLGAAREGAQVHAAMAVR-GVSPASNAILA 245
Query: 475 -CLVDLLGRAGRFDLALKTI 493
L+D+ + R +A++
Sbjct: 246 GALLDVYVKCHRLPVAMQVF 265
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 72/254 (28%), Positives = 120/254 (47%), Gaps = 14/254 (5%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQT-GVHGNSFTFPLVLKACANINSIWDGKRVHS--HVL 57
MI + G ++L + M + + FTF +LKAC+ + + +G +VH+ V
Sbjct: 175 MISGYAHAGQGRDSLLVFREMQRRHDEQPDEFTFASLLKACSGLGAAREGAQVHAAMAVR 234
Query: 58 KVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEA 117
V +A + L+D+Y KC + +V D + R+ + W ++I H++ EA
Sbjct: 235 GVSPASNAILAGALLDVYVKCHRLPVAMQVFDGLE--RRNAIQWTTVIVGHAQEGQVKEA 292
Query: 118 ILVLKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKL--GLLNNEIPLANSV 171
+ + + W G+ SVV+ + QG +HC K GL ++ +ANS+
Sbjct: 293 MCLFRRFWSSGVRADGHVLSSVVAVFADFALVEQGKQVHCYTAKTPAGL---DVSVANSL 349
Query: 172 MSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDL 231
+ MY K G EA F E+ ++VSWT +I G G+ EA L +M+ V D
Sbjct: 350 VDMYLKCGLTGEAGRRFREMPARNVVSWTAMINGVGKHGHGREAIDLFEEMQAEGVEADE 409
Query: 232 VVFLNLILGCAQVG 245
V +L L+ C+ G
Sbjct: 410 VAYLALLSACSHSG 423
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 87/209 (41%), Gaps = 9/209 (4%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+I G +E + + +GV + V+ A+ + GK+VH + K
Sbjct: 279 VIVGHAQEGQVKEAMCLFRRFWSSGVRADGHVLSSVVAVFADFALVEQGKQVHCYTAKTP 338
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
D V L+DMY KC + + EMP R+VVSW ++I+ + EAI +
Sbjct: 339 AGLDVSVANSLVDMYLKCGLTGEAGRRFREMPA--RNVVSWTAMINGVGKHGHGREAIDL 396
Query: 121 LKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGLLNNE--IPLANSVMSMYAKF 178
+EM G+E +++++S CS G+ C Y + + P A M
Sbjct: 397 FEEMQAEGVEADEVAYLALLSACSH-SGLVDECRRYFSRICQDRRMRPKAEHYACMVDLL 455
Query: 179 GKVNEARS----IFDEIGETSIVSWTTII 203
G+ E R I E ++ W T++
Sbjct: 456 GRAGELREAKELILSMPMEPTVGVWQTLL 484
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 63/110 (57%), Gaps = 1/110 (0%)
Query: 335 LATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVP 394
+A L A A SL G ++ ++ G S+ + +LI M++KCG+++ A EVF+ +P
Sbjct: 7 IADLLRASARGSSLRGGVQLHAALMKLGFGSDTMLNNNLIDMYAKCGKLHMAGEVFDGMP 66
Query: 395 DKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSAC 444
++++ W+A++ G+ HG + L LF +M+ G P+ ++ L AC
Sbjct: 67 ERNVVSWTALMVGFLHHGEARECLRLFGEMRG-SGTSPNEFTLSATLKAC 115
>gi|218187045|gb|EEC69472.1| hypothetical protein OsI_38669 [Oryza sativa Indica Group]
Length = 1084
Score = 337 bits (865), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 187/612 (30%), Positives = 318/612 (51%), Gaps = 36/612 (5%)
Query: 12 EETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGL 71
E L + M +G+ + T +L ACA++ + G ++HS++ K G D ++ L
Sbjct: 226 EHALEIFEEMQSSGLSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGMSSDYIMEGSL 285
Query: 72 IDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLND--EAILVLKEMWVLGL 129
+D+Y KC D V + V+ + R +VV WN I+ A + +ND ++ + +M G+
Sbjct: 286 LDLYVKCGD-VETALVIFNLGNRT-NVVLWNLILVAFGQ--INDLAKSFELFCQMQTAGI 341
Query: 130 ELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEAR 185
+ T+ ++ C+ G +H K G +++ ++ ++ MY+K+G + +AR
Sbjct: 342 RPNQFTYPCILRTCTCTGEIDLGEQIHSLSVKTGF-ESDMYVSGVLIDMYSKYGWLEKAR 400
Query: 186 SIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVG 245
+ + + E +VSWT++I GYV +A +M++ + PD + + I GCA +
Sbjct: 401 RVLEMLKEKDVVSWTSMIAGYVQHEYCKDALAAFKEMQKCGIWPDNIGLASAISGCAGIK 460
Query: 246 NLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIG 305
+ L +H+ + SGY+ + + N LV++Y +CG + A F+ + K W ++
Sbjct: 461 AMRQGLQIHARVYVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEIEHKDEITWNGLVS 520
Query: 306 GYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLES 365
G+AQ G EA+ +F R+ ++ V+ N T + LSA A L + +GK+I ++ G
Sbjct: 521 GFAQSGLHEEALKVFMRMDQSGVKHNVFTFVSALSASANLAEIKQGKQIHARVIKTGHSF 580
Query: 366 NRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQ 425
+V +LI ++ KCG AK F + +++ W+ +I + HG G +AL+ F +M+
Sbjct: 581 ETEVGNALISLYGKCGSFEDAKMEFSEMSERNEVSWNTIITSCSQHGRGLEALDFFDQMK 640
Query: 426 HVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGR 485
+GLS+FKSM +GI P +HY C++D+ GRAG+
Sbjct: 641 -------------------------KEGLSYFKSMSDKYGIRPRPDHYACVIDIFGRAGQ 675
Query: 486 FDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANL 545
D A K + EMP+ A VW LLSAC H N+E+GE AAK+LL L P + +Y+L++N
Sbjct: 676 LDRAKKFVEEMPIAADAMVWRTLLSACKVHKNIEVGELAAKHLLELEPHDSASYVLLSNA 735
Query: 546 FTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKEL 605
+ G W R +M DR + KEPG S +E+ V F GDR H L+ I L +
Sbjct: 736 YAVTGKWANRDQVRKMMRDRGVRKEPGRSWIEVKNVVHAFFVGDRLHPLAEQIYNFLAVI 795
Query: 606 HIKLLEAGYIAE 617
+ ++ + GY E
Sbjct: 796 NDRVAKVGYKQE 807
Score = 256 bits (653), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 147/520 (28%), Positives = 270/520 (51%), Gaps = 12/520 (2%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
M+ NG EE L Y M + GV + VL +C G+ VH+ K G
Sbjct: 114 MLSGYAQNGLGEEALWLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRSVHAQGYKQG 173
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F + FV LI +Y +C F + +V +MP R V++N++IS H++ + A+ +
Sbjct: 174 FCSETFVGNALITLYLRCGSFRLAERVFYDMP--HRDTVTFNTLISGHAQCAHGEHALEI 231
Query: 121 LKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
+EM GL T S+++ C+ ++G +H ++K G+ ++ I + S++ +Y
Sbjct: 232 FEEMQSSGLSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGMSSDYI-MEGSLLDLYV 290
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K G V A IF+ T++V W I+ + + ++ ++F L QM+ + P+ +
Sbjct: 291 KCGDVETALVIFNLGNRTNVVLWNLILVAFGQINDLAKSFELFCQMQTAGIRPNQFTYPC 350
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
++ C G + L +HSL +K+G+ ++ + +L+ MY+K G LE ARRV + + EK
Sbjct: 351 ILRTCTCTGEIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKD 410
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEE 356
V WTSMI GY Q Y +A+ FK + K + P+ LA+ +S CA + ++ +G +I
Sbjct: 411 VVSWTSMIAGYVQHEYCKDALAAFKEMQKCGIWPDNIGLASAISGCAGIKAMRQGLQIHA 470
Query: 357 YIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQ 416
+ ++G + + +L++++++CGRI +A FE + KD W+ +++G+A G+ ++
Sbjct: 471 RVYVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEIEHKDEITWNGLVSGFAQSGLHEE 530
Query: 417 ALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFF-KSMQSNFGIEPSIEHYLC 475
AL +F +M G+K + + S LSA ++ + G + +++ E + +
Sbjct: 531 ALKVFMRMDQ-SGVKHNVFTFVSALSASANLAEIKQGKQIHARVIKTGHSFETEVGN--A 587
Query: 476 LVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKH 515
L+ L G+ G F+ A EM E W ++++C +H
Sbjct: 588 LISLYGKCGSFEDAKMEFSEMS-ERNEVSWNTIITSCSQH 626
Score = 217 bits (552), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 134/469 (28%), Positives = 235/469 (50%), Gaps = 10/469 (2%)
Query: 33 FPLVLKACANINSIWDG-KRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEM 91
F L+AC W +H+ + G +D V LID+YSK + +R+V +E+
Sbjct: 44 FACALRACRGNGRRWQVVPEIHAKAITRGLGKDRIVGNLLIDLYSKNGLVLPARRVFEEL 103
Query: 92 PVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCS----FRQ 147
R VSW +++S +++ L +EA+ + ++M G+ + SV+S C+ F Q
Sbjct: 104 SA--RDNVSWVAMLSGYAQNGLGEEALWLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQ 161
Query: 148 GISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYV 207
G S+H YK G +E + N+++++Y + G A +F ++ V++ T+I G+
Sbjct: 162 GRSVHAQGYKQGFC-SETFVGNALITLYLRCGSFRLAERVFYDMPHRDTVTFNTLISGHA 220
Query: 208 NVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDP 267
+ A + +M+ ++PD V +L+ CA +G+L +HS L K+G +++
Sbjct: 221 QCAHGEHALEIFEEMQSSGLSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGMSSDYI 280
Query: 268 LDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTS 327
++ L+ +Y KCGD+E A +F+ +V LW ++ + Q+ +++ LF ++
Sbjct: 281 MEGSLLDLYVKCGDVETALVIFNLGNRTNVVLWNLILVAFGQINDLAKSFELFCQMQTAG 340
Query: 328 VRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAK 387
+RPN+ T L C G + G++I V G ES+ V LI M+SK G + KA+
Sbjct: 341 IRPNQFTYPCILRTCTCTGEIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKAR 400
Query: 388 EVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHS 447
V E + +KD+ W++MI GY H AL F +MQ G+ PD + S +S C+
Sbjct: 401 RVLEMLKEKDVVSWTSMIAGYVQHEYCKDALAAFKEMQKC-GIWPDNIGLASAISGCAGI 459
Query: 448 GMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEM 496
+ GL + + G + + LV+L R GR A + E+
Sbjct: 460 KAMRQGLQIHARVYVS-GYSGDVSIWNALVNLYARCGRIREAFSSFEEI 507
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 97/365 (26%), Positives = 181/365 (49%), Gaps = 4/365 (1%)
Query: 151 MHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVG 210
+H GL + I + N ++ +Y+K G V AR +F+E+ VSW ++ GY G
Sbjct: 64 IHAKAITRGLGKDRI-VGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNG 122
Query: 211 NVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDN 270
EA L QM R V P V +++ C + S+H+ K G+ +E + N
Sbjct: 123 LGEEALWLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRSVHAQGYKQGFCSETFVGN 182
Query: 271 LLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRP 330
L+++Y +CG LA RVF + + + ++I G+AQ + A+ +F+ + + + P
Sbjct: 183 ALITLYLRCGSFRLAERVFYDMPHRDTVTFNTLISGHAQCAHGEHALEIFEEMQSSGLSP 242
Query: 331 NEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVF 390
+ T+++ L+ACA LG L KG ++ Y+ G+ S+ ++ SL+ ++ KCG + A +F
Sbjct: 243 DCVTISSLLAACASLGDLQKGTQLHSYLFKAGMSSDYIMEGSLLDLYVKCGDVETALVIF 302
Query: 391 ERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMV 450
++ +W+ ++ + ++ LF +MQ G++P+ Y IL C+ +G +
Sbjct: 303 NLGNRTNVVLWNLILVAFGQINDLAKSFELFCQMQ-TAGIRPNQFTYPCILRTCTCTGEI 361
Query: 451 DDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLS 510
D G S+ G E + L+D+ + G + A + + EM E W +++
Sbjct: 362 DLGEQ-IHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVL-EMLKEKDVVSWTSMIA 419
Query: 511 ACMKH 515
++H
Sbjct: 420 GYVQH 424
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 97/196 (49%), Gaps = 5/196 (2%)
Query: 304 IGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKG-KEIEEYIVLNG 362
+ G+ P++ ++LF + A L AC G + EI + G
Sbjct: 13 LAGFLAQEDPAKVLSLFADKARQHGGLGPLDFACALRACRGNGRRWQVVPEIHAKAITRG 72
Query: 363 LESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFY 422
L +R V LI ++SK G + A+ VFE + +D W AM++GYA +G+G++AL L+
Sbjct: 73 LGKDRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNGLGEEALWLYR 132
Query: 423 KMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFF-KSMQSNFGIEPSIEHYLCLVDLLG 481
+M H G+ P V +S+LS+C+ + + G S + + F E + + L+ L
Sbjct: 133 QM-HRAGVVPTPYVLSSVLSSCTKAELFAQGRSVHAQGYKQGFCSETFVGN--ALITLYL 189
Query: 482 RAGRFDLALKTIHEMP 497
R G F LA + ++MP
Sbjct: 190 RCGSFRLAERVFYDMP 205
>gi|225459736|ref|XP_002284744.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20230
[Vitis vinifera]
Length = 758
Score = 337 bits (864), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 200/651 (30%), Positives = 325/651 (49%), Gaps = 78/651 (11%)
Query: 45 SIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSI 104
S+ ++ H+H+LK G D + T L+ Y+ F + VLD +P +V S++++
Sbjct: 28 SLSQTRQAHAHILKTGLFNDTHLATKLLSHYANNMCFADATLVLDLVPEP--NVFSFSTL 85
Query: 105 ISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGL 160
I A S+ A+ +M GL S V C+ + +H + +
Sbjct: 86 IYAFSKFHQFHHALSTFSQMLTRGLMPDNRVLPSAVKACAGLSALKPARQVHG-IASVSG 144
Query: 161 LNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCN 220
+++ + +S++ MY K ++ +A +FD + E +VSW+ ++ Y G V+EA L +
Sbjct: 145 FDSDSFVQSSLVHMYIKCNQIRDAHRVFDRMFEPDVVSWSALVAAYARQGCVDEAKRLFS 204
Query: 221 QMRRMSVTPDLVVFLNLILGCAQVG----------------------------------- 245
+M V P+L+ + +I G G
Sbjct: 205 EMGDSGVQPNLISWNGMIAGFNHSGLYSEAVLMFLDMHLRGFEPDGTTISSVLPAVGDLE 264
Query: 246 NLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKC-------------------------- 279
+L + + +H ++K G ++ + + L+ MY KC
Sbjct: 265 DLVMGILIHGYVIKQGLVSDKCVSSALIDMYGKCSCTSEMSQVFDQMDHMDVGSCNAFIF 324
Query: 280 -----GDLELARRVF----DAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRP 330
G +E + R+F D +E +V WTSMI +Q G EA+ LF+ + V+P
Sbjct: 325 GLSRNGQVESSLRLFRQLKDQGMELNVVSWTSMIACCSQNGRDIEALELFREMQIAGVKP 384
Query: 331 NEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVF 390
N T+ L AC + +L GK + + G+ ++ V ++LI M++KCGRI ++ F
Sbjct: 385 NSVTIPCLLPACGNIAALMHGKAAHCFSLRRGISTDVYVGSALIDMYAKCGRIQASRICF 444
Query: 391 ERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMV 450
+ +P K+L W+A+I GYA+HG +A+ +F MQ G KPD + +T +LSACS SG+
Sbjct: 445 DGIPTKNLVCWNAVIAGYAMHGKAKEAMEIFDLMQR-SGQKPDIISFTCVLSACSQSGLT 503
Query: 451 DDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLS 510
++G +F SM S +GIE +EHY C+V LL RAG+ + A I MPV A VW LLS
Sbjct: 504 EEGSYYFNSMSSKYGIEARVEHYACMVTLLSRAGKLEQAYAMIRRMPVNPDACVWGALLS 563
Query: 511 ACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKE 570
+C H+NV LGE AA+ L L P + GNYIL++N++ S GMW E R +M ++ L K
Sbjct: 564 SCRVHNNVSLGEVAAEKLFELEPSNPGNYILLSNIYASKGMWNEVNRVRDMMKNKGLRKN 623
Query: 571 PGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKELHIKLLEAGYIAEADIV 621
PG S +E+ V + +AGD+SH I + L +L +++ + GY E + V
Sbjct: 624 PGCSWIEVKNKVHMLLAGDKSHPQMTQIIEKLDKLSMEMKKLGYFPEINFV 674
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 119/492 (24%), Positives = 222/492 (45%), Gaps = 78/492 (15%)
Query: 11 FEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTG 70
F LST+S ML G+ ++ P +KACA ++++ ++VH GF D+FVQ+
Sbjct: 95 FHHALSTFSQMLTRGLMPDNRVLPSAVKACAGLSALKPARQVHGIASVSGFDSDSFVQSS 154
Query: 71 LIDMYSKCSDFVSSRKVLDEM-----------------------PVRLRS---------- 97
L+ MY KC+ + +V D M RL S
Sbjct: 155 LVHMYIKCNQIRDAHRVFDRMFEPDVVSWSALVAAYARQGCVDEAKRLFSEMGDSGVQPN 214
Query: 98 VVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGC----SFRQGISMHC 153
++SWN +I+ + + L EA+L+ +M + G E +T SV+ GI +H
Sbjct: 215 LISWNGMIAGFNHSGLYSEAVLMFLDMHLRGFEPDGTTISSVLPAVGDLEDLVMGILIHG 274
Query: 154 CVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIG--------------------- 192
V K GL++++ ++++++ MY K +E +FD++
Sbjct: 275 YVIKQGLVSDKC-VSSALIDMYGKCSCTSEMSQVFDQMDHMDVGSCNAFIFGLSRNGQVE 333
Query: 193 --------------ETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLI 238
E ++VSWT++I G EA L +M+ V P+ V L+
Sbjct: 334 SSLRLFRQLKDQGMELNVVSWTSMIACCSQNGRDIEALELFREMQIAGVKPNSVTIPCLL 393
Query: 239 LGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVF 298
C + L + H L+ G + + + + L+ MY KCG ++ +R FD + K++
Sbjct: 394 PACGNIAALMHGKAAHCFSLRRGISTDVYVGSALIDMYAKCGRIQASRICFDGIPTKNLV 453
Query: 299 LWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYI 358
W ++I GYA G EA+ +F + ++ +P+ + LSAC++ G +G +
Sbjct: 454 CWNAVIAGYAMHGKAKEAMEIFDLMQRSGQKPDIISFTCVLSACSQSGLTEEGSYYFNSM 513
Query: 359 VLN-GLESNRQVQTSLIHMFSKCGRINKAKEVFERVP-DKDLAVWSAMINGYAIH---GM 413
G+E+ + ++ + S+ G++ +A + R+P + D VW A+++ +H +
Sbjct: 514 SSKYGIEARVEHYACMVTLLSRAGKLEQAYAMIRRMPVNPDACVWGALLSSCRVHNNVSL 573
Query: 414 GDQALNLFYKMQ 425
G+ A ++++
Sbjct: 574 GEVAAEKLFELE 585
Score = 108 bits (271), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 83/324 (25%), Positives = 150/324 (46%), Gaps = 41/324 (12%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI ++G + E + + M G + T VL A ++ + G +H +V+K G
Sbjct: 221 MIAGFNHSGLYSEAVLMFLDMHLRGFEPDGTTISSVLPAVGDLEDLVMGILIHGYVIKQG 280
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEM-----------------------PVRL-- 95
D V + LIDMY KCS +V D+M +RL
Sbjct: 281 LVSDKCVSSALIDMYGKCSCTSEMSQVFDQMDHMDVGSCNAFIFGLSRNGQVESSLRLFR 340
Query: 96 --------RSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGC---- 143
+VVSW S+I+ S+ + EA+ + +EM + G++ ++ T ++ C
Sbjct: 341 QLKDQGMELNVVSWTSMIACCSQNGRDIEALELFREMQIAGVKPNSVTIPCLLPACGNIA 400
Query: 144 SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTII 203
+ G + HC + G ++ ++ + ++++ MYAK G++ +R FD I ++V W +I
Sbjct: 401 ALMHGKAAHCFSLRRG-ISTDVYVGSALIDMYAKCGRIQASRICFDGIPTKNLVCWNAVI 459
Query: 204 GGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYN 263
GY G EA + + M+R PD++ F ++ C+Q G L S + + S Y
Sbjct: 460 AGYAMHGKAKEAMEIFDLMQRSGQKPDIISFTCVLSACSQSG-LTEEGSYYFNSMSSKYG 518
Query: 264 NEDPLDN--LLVSMYTKCGDLELA 285
E +++ +V++ ++ G LE A
Sbjct: 519 IEARVEHYACMVTLLSRAGKLEQA 542
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/250 (27%), Positives = 110/250 (44%), Gaps = 32/250 (12%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI + NG E L + M GV NS T P +L AC NI ++ GK H L+ G
Sbjct: 357 MIACCSQNGRDIEALELFREMQIAGVKPNSVTIPCLLPACGNIAALMHGKAAHCFSLRRG 416
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
D +V + LIDMY+KC +SR D +P +++V WN++I+ ++ EA+ +
Sbjct: 417 ISTDVYVGSALIDMYAKCGRIQASRICFDGIPT--KNLVCWNAVIAGYAMHGKAKEAMEI 474
Query: 121 LKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGK 180
M G + +F V+S CS + G++ Y SM +K+G
Sbjct: 475 FDLMQRSGQKPDIISFTCVLSACS-QSGLTEEGSYY--------------FNSMSSKYGI 519
Query: 181 VNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILG 240
E + + ++ G + +A+ + +RRM V PD V+ L+
Sbjct: 520 ------------EARVEHYACMVTLLSRAGKLEQAYAM---IRRMPVNPDACVWGALLSS 564
Query: 241 CAQVGNLFLA 250
C N+ L
Sbjct: 565 CRVHNNVSLG 574
>gi|347954542|gb|AEP33771.1| organelle transcript processing 82, partial [Thlaspi arvense]
Length = 673
Score = 337 bits (864), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 181/535 (33%), Positives = 296/535 (55%), Gaps = 39/535 (7%)
Query: 101 WNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVY 156
WN+++ ++ + A+ + M LGL ++ TF ++ C+ F +G +H V
Sbjct: 34 WNTMLRGYALSSDPVSALKLYVVMISLGLLPNSYTFPFLLKSCAKSKAFEEGQQIHGHVL 93
Query: 157 KLGLLNNEIPLANSVMSMYAKFGKVNEARSIFD--------------------------- 189
KLG ++ + S++SMYA+ G++ +A +FD
Sbjct: 94 KLGY-EPDLYVHTSLISMYAQNGRLEDAHKVFDRSSHRDVVSYTALITGYASSGNIRSAQ 152
Query: 190 ----EIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVG 245
EI +VSW +I GY G+ EA L +M + +V PD + ++ CAQ
Sbjct: 153 EMFDEIPVKDVVSWNAMISGYAETGSYKEALELFKEMMKTNVRPDEGTMVTVLSACAQSR 212
Query: 246 NLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIG 305
++ L +HS + G+ + + N L+ +Y+KCG +E A +F+ + K V W ++IG
Sbjct: 213 SVELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCGQVETACGLFEGLSCKDVVSWNTLIG 272
Query: 306 GYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYI--VLNGL 363
GY + EA+ LF+ +L++ PN+ T+ + L ACA LG++ G+ I YI L +
Sbjct: 273 GYTHMNLYKEALLLFQEMLRSGESPNDVTIVSILPACAHLGAIDIGRWIHVYIDKKLKDV 332
Query: 364 ESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYK 423
+ ++TSLI M++KCG I A +VF + K L+ W+AMI G+A+HG + +LF +
Sbjct: 333 TNAPSLRTSLIDMYAKCGDIEAAHQVFNSMLHKSLSSWNAMIFGFAMHGRANAGFDLFSR 392
Query: 424 MQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRA 483
M+ G++PD + + +LSACSHSG +D G FKSM ++ I P +EHY C++DLLG +
Sbjct: 393 MRK-NGIEPDDITFVGLLSACSHSGKLDLGRHIFKSMTQDYDITPKLEHYGCMIDLLGHS 451
Query: 484 GRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMA 543
G F A + I MP+E +W LL AC +H N+EL E A+NL+ + P + G+Y+L++
Sbjct: 452 GLFKEAKEMIKTMPMEPDGVIWCSLLKACRRHGNLELAESFARNLMKVEPENPGSYVLLS 511
Query: 544 NLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDI 598
N++ +AG W E A R L++ + + K PG S +EID V F+ GD+ H + +I
Sbjct: 512 NIYATAGEWDEVAKVRALLNGKGMKKVPGCSSIEIDSEVHEFIVGDKLHPRNREI 566
Score = 216 bits (549), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 139/486 (28%), Positives = 239/486 (49%), Gaps = 50/486 (10%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
M+R + L Y M+ G+ NS+TFP +LK+CA + +G+++H HVLK+G
Sbjct: 37 MLRGYALSSDPVSALKLYVVMISLGLLPNSYTFPFLLKSCAKSKAFEEGQQIHGHVLKLG 96
Query: 61 FQQDAFVQTGLIDMYSK-------------------------------CSDFVSSRKVLD 89
++ D +V T LI MY++ + S++++ D
Sbjct: 97 YEPDLYVHTSLISMYAQNGRLEDAHKVFDRSSHRDVVSYTALITGYASSGNIRSAQEMFD 156
Query: 90 EMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGC----SF 145
E+PV + VVSWN++IS ++ EA+ + KEM + T V+V+S C S
Sbjct: 157 EIPV--KDVVSWNAMISGYAETGSYKEALELFKEMMKTNVRPDEGTMVTVLSACAQSRSV 214
Query: 146 RQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGG 205
G +H + G +N + + N+++ +Y+K G+V A +F+ + +VSW T+IGG
Sbjct: 215 ELGRQVHSWIDDHGFGSN-LKIVNALIDLYSKCGQVETACGLFEGLSCKDVVSWNTLIGG 273
Query: 206 YVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLK--SGYN 263
Y ++ EA L +M R +P+ V ++++ CA +G + + +H + K
Sbjct: 274 YTHMNLYKEALLLFQEMLRSGESPNDVTIVSILPACAHLGAIDIGRWIHVYIDKKLKDVT 333
Query: 264 NEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRL 323
N L L+ MY KCGD+E A +VF+++L KS+ W +MI G+A G + +LF R+
Sbjct: 334 NAPSLRTSLIDMYAKCGDIEAAHQVFNSMLHKSLSSWNAMIFGFAMHGRANAGFDLFSRM 393
Query: 324 LKTSVRPNEATLATTLSACAELGSLSKGKEI-----EEYIVLNGLESNRQVQTSLIHMFS 378
K + P++ T LSAC+ G L G+ I ++Y + LE +I +
Sbjct: 394 RKNGIEPDDITFVGLLSACSHSGKLDLGRHIFKSMTQDYDITPKLEH----YGCMIDLLG 449
Query: 379 KCGRINKAKEVFERVP-DKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVY 437
G +AKE+ + +P + D +W +++ HG + A + + VE P + V
Sbjct: 450 HSGLFKEAKEMIKTMPMEPDGVIWCSLLKACRRHGNLELAESFARNLMKVEPENPGSYVL 509
Query: 438 TSILSA 443
S + A
Sbjct: 510 LSNIYA 515
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 122/443 (27%), Positives = 196/443 (44%), Gaps = 75/443 (16%)
Query: 184 ARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQ 243
A S+F I E + + W T++ GY + A L M + + P+ F L+ CA+
Sbjct: 19 AISVFATIQEPNQLIWNTMLRGYALSSDPVSALKLYVVMISLGLLPNSYTFPFLLKSCAK 78
Query: 244 VGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRV--------------- 288
+H +LK GY + + L+SMY + G LE A +V
Sbjct: 79 SKAFEEGQQIHGHVLKLGYEPDLYVHTSLISMYAQNGRLEDAHKVFDRSSHRDVVSYTAL 138
Query: 289 ----------------FDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNE 332
FD + K V W +MI GYA+ G EA+ LFK ++KT+VRP+E
Sbjct: 139 ITGYASSGNIRSAQEMFDEIPVKDVVSWNAMISGYAETGSYKEALELFKEMMKTNVRPDE 198
Query: 333 ATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFER 392
T+ T LSACA+ S+ G+++ +I +G SN ++ +LI ++SKCG++ A +FE
Sbjct: 199 GTMVTVLSACAQSRSVELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCGQVETACGLFEG 258
Query: 393 VPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDD 452
+ KD+ W+ +I GY + +AL LF +M G P+ V SIL AC+H G +D
Sbjct: 259 LSCKDVVSWNTLIGGYTHMNLYKEALLLFQEMLR-SGESPNDVTIVSILPACAHLGAIDI 317
Query: 453 GL---SFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEM------------- 496
G + + PS+ L+D+ + G + A + + M
Sbjct: 318 GRWIHVYIDKKLKDVTNAPSLR--TSLIDMYAKCGDIEAAHQVFNSMLHKSLSSWNAMIF 375
Query: 497 ---------------------PVEVQAQVWAPLLSACMKHHNVELGEYAAKNL---LTLN 532
+E + LLSAC ++LG + K++ +
Sbjct: 376 GFAMHGRANAGFDLFSRMRKNGIEPDDITFVGLLSACSHSGKLDLGRHIFKSMTQDYDIT 435
Query: 533 PGSTGNYILMANLFTSAGMWKEA 555
P +Y M +L +G++KEA
Sbjct: 436 P-KLEHYGCMIDLLGHSGLFKEA 457
>gi|90399180|emb|CAJ86042.1| H0723C07.12 [Oryza sativa Indica Group]
Length = 886
Score = 337 bits (864), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 192/590 (32%), Positives = 317/590 (53%), Gaps = 11/590 (1%)
Query: 36 VLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRL 95
+L+A A +S+ G ++H+ ++K+GF D + LIDMY+KC + +V D MP R
Sbjct: 206 LLRASARGSSLRGGVQLHAALMKLGFGSDTMLNNNLIDMYAKCGKLHMAGEVFDGMPER- 264
Query: 96 RSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCS--FRQGISMHC 153
+VVSW +++ E + + EM G + T + + C R G+ +H
Sbjct: 265 -NVVSWTALMVGFLHHGEARECLRLFGEMRGSGTSPNEFTLSATLKACGGGTRAGVQIHG 323
Query: 154 CVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVN 213
+ G +++ +ANS++ MY+K +AR +FD I ++ +W ++I GY + G
Sbjct: 324 VCVRTGFEGHDV-VANSLVVMYSKGRWTGDARRVFDVIPSRNLATWNSMISGYAHAGQGR 382
Query: 214 EAFGLCNQM-RRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYN--NEDPLDN 270
++ + +M RR PD F +L+ C+ +G +H+ + G + + L
Sbjct: 383 DSLLVFREMQRRHDEQPDEFTFASLLKACSGLGAAREGAQVHAAMAVRGVSPASNAILAG 442
Query: 271 LLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRP 330
L+ +Y KC L +A +VFD + ++ WT++I G+AQ G EA+ LF+R + VR
Sbjct: 443 ALLDVYVKCHRLPVAMQVFDGLERRNAIQWTTVIVGHAQEGQVKEAMCLFRRFWSSGVRA 502
Query: 331 NEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVF 390
+ L++ ++ A+ + +GK++ Y + V SL+ M+ KCG +A F
Sbjct: 503 DGHVLSSVVAVFADFALVEQGKQVHCYTAKTPAGLDVSVANSLVDMYLKCGLTGEAGRRF 562
Query: 391 ERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMV 450
+P +++ W+AMING HG G +A++LF +MQ EG++ D V Y ++LSACSHSG+V
Sbjct: 563 REMPARNVVSWTAMINGVGKHGHGREAIDLFEEMQ-AEGVEADEVAYLALLSACSHSGLV 621
Query: 451 DDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLS 510
D+ +F + + + P EHY C+VDLLGRAG A + I MP+E VW LLS
Sbjct: 622 DECRRYFSRICQDRRMRPKAEHYACMVDLLGRAGELREAKELILSMPMEPTVGVWQTLLS 681
Query: 511 ACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKE 570
AC H +V +G LL ++ + NY++++N+ AG W+E RG M + L K+
Sbjct: 682 ACRVHKDVAVGREVGDVLLAVDGDNPVNYVMLSNILAEAGEWRECQGIRGAMRRKGLRKQ 741
Query: 571 PGWSQVEIDGSVQVFV-AGDRSHHLSVDIRKTLKELHIKLLEA-GYIAEA 618
G S E+D V F GD +H + DIR+ L+E+ ++ E GY +A
Sbjct: 742 GGCSWTEVDKEVHFFYGGGDDAHPQAGDIRRALREVEARMRERLGYSGDA 791
Score = 152 bits (384), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 110/414 (26%), Positives = 193/414 (46%), Gaps = 14/414 (3%)
Query: 7 NNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAF 66
++G E L + M +G N FT LKAC G ++H ++ GF+
Sbjct: 278 HHGEARECLRLFGEMRGSGTSPNEFTLSATLKACGGGTRA--GVQIHGVCVRTGFEGHDV 335
Query: 67 VQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWV 126
V L+ MYSK +R+V D +P R++ +WNS+IS ++ A +++LV +EM
Sbjct: 336 VANSLVVMYSKGRWTGDARRVFDVIPS--RNLATWNSMISGYAHAGQGRDSLLVFREMQR 393
Query: 127 LGLELSAS-TFVSVVSGCS----FRQGISMHCCVYKLGL--LNNEIPLANSVMSMYAKFG 179
E TF S++ CS R+G +H + G+ +N I LA +++ +Y K
Sbjct: 394 RHDEQPDEFTFASLLKACSGLGAAREGAQVHAAMAVRGVSPASNAI-LAGALLDVYVKCH 452
Query: 180 KVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLIL 239
++ A +FD + + + WTT+I G+ G V EA L + V D V +++
Sbjct: 453 RLPVAMQVFDGLERRNAIQWTTVIVGHAQEGQVKEAMCLFRRFWSSGVRADGHVLSSVVA 512
Query: 240 GCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFL 299
A + +H K+ + + N LV MY KCG A R F + ++V
Sbjct: 513 VFADFALVEQGKQVHCYTAKTPAGLDVSVANSLVDMYLKCGLTGEAGRRFREMPARNVVS 572
Query: 300 WTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIV 359
WT+MI G + G+ EA++LF+ + V +E LSAC+ G + + + I
Sbjct: 573 WTAMINGVGKHGHGREAIDLFEEMQAEGVEADEVAYLALLSACSHSGLVDECRRYFSRIC 632
Query: 360 LN-GLESNRQVQTSLIHMFSKCGRINKAKEVFERVP-DKDLAVWSAMINGYAIH 411
+ + + ++ + + G + +AKE+ +P + + VW +++ +H
Sbjct: 633 QDRRMRPKAEHYACMVDLLGRAGELREAKELILSMPMEPTVGVWQTLLSACRVH 686
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 85/260 (32%), Positives = 138/260 (53%), Gaps = 5/260 (1%)
Query: 236 NLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEK 295
+L+ A+ +L + +H+ L+K G+ ++ L+N L+ MY KCG L +A VFD + E+
Sbjct: 205 DLLRASARGSSLRGGVQLHAALMKLGFGSDTMLNNNLIDMYAKCGKLHMAGEVFDGMPER 264
Query: 296 SVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIE 355
+V WT+++ G+ G E + LF + + PNE TL+ TL AC G G +I
Sbjct: 265 NVVSWTALMVGFLHHGEARECLRLFGEMRGSGTSPNEFTLSATLKACG--GGTRAGVQIH 322
Query: 356 EYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGD 415
V G E + V SL+ M+SK A+ VF+ +P ++LA W++MI+GYA G G
Sbjct: 323 GVCVRTGFEGHDVVANSLVVMYSKGRWTGDARRVFDVIPSRNLATWNSMISGYAHAGQGR 382
Query: 416 QALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYL- 474
+L +F +MQ +PD + S+L ACS G +G +M G+ P+ L
Sbjct: 383 DSLLVFREMQRRHDEQPDEFTFASLLKACSGLGAAREGAQVHAAMAVR-GVSPASNAILA 441
Query: 475 -CLVDLLGRAGRFDLALKTI 493
L+D+ + R +A++
Sbjct: 442 GALLDVYVKCHRLPVAMQVF 461
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 72/254 (28%), Positives = 120/254 (47%), Gaps = 14/254 (5%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQT-GVHGNSFTFPLVLKACANINSIWDGKRVHS--HVL 57
MI + G ++L + M + + FTF +LKAC+ + + +G +VH+ V
Sbjct: 371 MISGYAHAGQGRDSLLVFREMQRRHDEQPDEFTFASLLKACSGLGAAREGAQVHAAMAVR 430
Query: 58 KVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEA 117
V +A + L+D+Y KC + +V D + R+ + W ++I H++ EA
Sbjct: 431 GVSPASNAILAGALLDVYVKCHRLPVAMQVFDGL--ERRNAIQWTTVIVGHAQEGQVKEA 488
Query: 118 ILVLKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKL--GLLNNEIPLANSV 171
+ + + W G+ SVV+ + QG +HC K GL ++ +ANS+
Sbjct: 489 MCLFRRFWSSGVRADGHVLSSVVAVFADFALVEQGKQVHCYTAKTPAGL---DVSVANSL 545
Query: 172 MSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDL 231
+ MY K G EA F E+ ++VSWT +I G G+ EA L +M+ V D
Sbjct: 546 VDMYLKCGLTGEAGRRFREMPARNVVSWTAMINGVGKHGHGREAIDLFEEMQAEGVEADE 605
Query: 232 VVFLNLILGCAQVG 245
V +L L+ C+ G
Sbjct: 606 VAYLALLSACSHSG 619
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 87/209 (41%), Gaps = 9/209 (4%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+I G +E + + +GV + V+ A+ + GK+VH + K
Sbjct: 475 VIVGHAQEGQVKEAMCLFRRFWSSGVRADGHVLSSVVAVFADFALVEQGKQVHCYTAKTP 534
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
D V L+DMY KC + + EMP R+VVSW ++I+ + EAI +
Sbjct: 535 AGLDVSVANSLVDMYLKCGLTGEAGRRFREMPA--RNVVSWTAMINGVGKHGHGREAIDL 592
Query: 121 LKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGLLNNE--IPLANSVMSMYAKF 178
+EM G+E +++++S CS G+ C Y + + P A M
Sbjct: 593 FEEMQAEGVEADEVAYLALLSACSH-SGLVDECRRYFSRICQDRRMRPKAEHYACMVDLL 651
Query: 179 GKVNEARS----IFDEIGETSIVSWTTII 203
G+ E R I E ++ W T++
Sbjct: 652 GRAGELREAKELILSMPMEPTVGVWQTLL 680
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 63/110 (57%), Gaps = 1/110 (0%)
Query: 335 LATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVP 394
+A L A A SL G ++ ++ G S+ + +LI M++KCG+++ A EVF+ +P
Sbjct: 203 IADLLRASARGSSLRGGVQLHAALMKLGFGSDTMLNNNLIDMYAKCGKLHMAGEVFDGMP 262
Query: 395 DKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSAC 444
++++ W+A++ G+ HG + L LF +M+ G P+ ++ L AC
Sbjct: 263 ERNVVSWTALMVGFLHHGEARECLRLFGEMRG-SGTSPNEFTLSATLKAC 311
>gi|115476154|ref|NP_001061673.1| Os08g0375800 [Oryza sativa Japonica Group]
gi|27260973|dbj|BAC45090.1| selenium-binding protein-like [Oryza sativa Japonica Group]
gi|40253357|dbj|BAD05289.1| selenium-binding protein-like [Oryza sativa Japonica Group]
gi|113623642|dbj|BAF23587.1| Os08g0375800 [Oryza sativa Japonica Group]
gi|215715200|dbj|BAG94951.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 696
Score = 337 bits (864), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 195/607 (32%), Positives = 323/607 (53%), Gaps = 13/607 (2%)
Query: 8 NGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFV 67
+G+ E +M G+ N+F L++ A G ++ S LK G + F
Sbjct: 71 SGAHPEAWRLLRAMHAQGLASNTFALGSALRSAAVARRPAIGAQLQSLALKSGLANNVFA 130
Query: 68 QTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVL 127
+ L+D+Y+KC +R+V D MP R + VSWN++I+ ++ + A+ + EM
Sbjct: 131 ASALLDVYAKCGRVRDARQVFDGMPER--NTVSWNALIAGYTESGDMASALELFLEMERE 188
Query: 128 GLELSASTFVSVVSGCSFRQGISMHCCVYKLGLLNNEIPLA--NSVMSMYAKFGKVNEAR 185
GL +TF S+++ MH K+ + + L N+ ++ Y++ G + ++R
Sbjct: 189 GLAPDEATFASLLTAVEGPSCFLMHQLHGKIVKYGSALGLTVLNAAITAYSQCGSLKDSR 248
Query: 186 SIFDEIGET-SIVSWTTIIGGYVNVGNVNEAFGL-CNQMRRMSVTPDLVVFLNLILGCAQ 243
IFD IG+ ++SW ++G Y + G +EA M+ V PD+ F ++I C++
Sbjct: 249 RIFDGIGDIRDLISWNAMLGAYTHNGMDDEAMKFFVRMMQESGVHPDMYSFTSIISSCSE 308
Query: 244 VG-NLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGD---LELARRVFDAVLEKSVFL 299
G + +H L++KS P+ N L++MYT+ + +E A + F++++ K
Sbjct: 309 HGHDDHQGRVIHGLVIKSALEGVTPVCNALIAMYTRYNENCMMEDAYKCFNSLVLKDTVS 368
Query: 300 WTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIV 359
W SM+ GY+Q G ++A+ F+ + +VR +E + L + +EL L GK+I ++
Sbjct: 369 WNSMLTGYSQHGLSADALKFFRCMCSENVRTDEYAFSAALRSSSELAVLQLGKQIHGLVI 428
Query: 360 LNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALN 419
+G SN V +SLI M+SK G I+ A++ FE W+AMI GYA HG +
Sbjct: 429 HSGFASNDFVSSSLIFMYSKSGIIDDARKSFEEADKSSSVPWNAMIFGYAQHGQAENVDI 488
Query: 420 LFYKMQHVEGLKP-DAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVD 478
LF +M ++ P D + + ++++CSH+G+VD+G +M++ +G+ +EHY C VD
Sbjct: 489 LFNEM--LQRKAPLDHITFVGLITSCSHAGLVDEGSEILNTMETKYGVPLRMEHYACGVD 546
Query: 479 LLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGN 538
L GRAG+ D A K I MP E A VW LL AC H NVEL A +L P
Sbjct: 547 LYGRAGQLDKAKKLIDSMPFEPDAMVWMTLLGACRIHGNVELASDVASHLFVAEPRQHST 606
Query: 539 YILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDI 598
Y+L++++++ GMW + AT + +M R L+K PGWS +E+ V F A D+SH +I
Sbjct: 607 YVLLSSMYSGLGMWSDRATVQRVMKKRGLSKVPGWSWIEVKNEVHSFNAEDKSHPKMDEI 666
Query: 599 RKTLKEL 605
+ L+ L
Sbjct: 667 YEMLRVL 673
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 89/309 (28%), Positives = 151/309 (48%), Gaps = 13/309 (4%)
Query: 169 NSVMSMYAKFGK--VNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMS 226
N +++ Y++ + AR +FDE+ VSW ++ G EA+ L M
Sbjct: 29 NQLLTAYSRSSPDGLAAARRVFDEVPRRDEVSWNALLAAQAASGAHPEAWRLLRAMHAQG 88
Query: 227 VTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELAR 286
+ + + + A + + SL LKSG N + L+ +Y KCG + AR
Sbjct: 89 LASNTFALGSALRSAAVARRPAIGAQLQSLALKSGLANNVFAASALLDVYAKCGRVRDAR 148
Query: 287 RVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELG 346
+VFD + E++ W ++I GY + G + A+ LF + + + P+EAT A+ L+A E
Sbjct: 149 QVFDGMPERNTVSWNALIAGYTESGDMASALELFLEMEREGLAPDEATFASLLTAV-EGP 207
Query: 347 SLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPD-KDLAVWSAMI 405
S ++ IV G V + I +S+CG + ++ +F+ + D +DL W+AM+
Sbjct: 208 SCFLMHQLHGKIVKYGSALGLTVLNAAITAYSQCGSLKDSRRIFDGIGDIRDLISWNAML 267
Query: 406 NGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACS------HSGMVDDGLSFFKS 459
Y +GM D+A+ F +M G+ PD +TSI+S+CS H G V GL +
Sbjct: 268 GAYTHNGMDDEAMKFFVRMMQESGVHPDMYSFTSIISSCSEHGHDDHQGRVIHGLVIKSA 327
Query: 460 MQSNFGIEP 468
++ G+ P
Sbjct: 328 LE---GVTP 333
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/227 (22%), Positives = 100/227 (44%), Gaps = 7/227 (3%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
M+ + +G + L + M V + + F L++ + + + GK++H V+ G
Sbjct: 372 MLTGYSQHGLSADALKFFRCMCSENVRTDEYAFSAALRSSSELAVLQLGKQIHGLVIHSG 431
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F + FV + LI MYSK +RK +E S V WN++I +++ + ++
Sbjct: 432 FASNDFVSSSLIFMYSKSGIIDDARKSFEE--ADKSSSVPWNAMIFGYAQHGQAENVDIL 489
Query: 121 LKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGLLNNEIPLANSV----MSMYA 176
EM L TFV +++ CS + + +PL + +Y
Sbjct: 490 FNEMLQRKAPLDHITFVGLITSCSHAGLVDEGSEILNTMETKYGVPLRMEHYACGVDLYG 549
Query: 177 KFGKVNEARSIFDEIG-ETSIVSWTTIIGGYVNVGNVNEAFGLCNQM 222
+ G++++A+ + D + E + W T++G GNV A + + +
Sbjct: 550 RAGQLDKAKKLIDSMPFEPDAMVWMTLLGACRIHGNVELASDVASHL 596
>gi|449491161|ref|XP_004158817.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g15930-like [Cucumis
sativus]
Length = 744
Score = 337 bits (864), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 194/622 (31%), Positives = 322/622 (51%), Gaps = 46/622 (7%)
Query: 32 TFPLV--LKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDM--YSKCSDFVSSRKV 87
T PL+ L+ C +++ + ++VH +K G + +Q ++ + DF +R++
Sbjct: 39 THPLISLLETCESMDQL---QQVHCQAIKKGLNANPVLQNRVMTFCCTHEYGDFQYARRL 95
Query: 88 LDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSG----C 143
DE+P ++ WN++I +SR + + EM G++ TF + G
Sbjct: 96 FDEIPEP--NLFIWNTMIRGYSRLDFPQLGVSLYLEMLRRGVKPDRYTFPFLFKGFTRDI 153
Query: 144 SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTII 203
+ G +H V K GL N + + +++ MY G+++ AR +FD + +++W II
Sbjct: 154 ALEYGRQLHGHVLKHGLQYN-VFVHTALVQMYLLCGQLDTARGVFDVCPKADVITWNMII 212
Query: 204 GGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYN 263
Y VG E+ L M V P V + ++ C+++ +L +HS +
Sbjct: 213 SAYNKVGKFEESRRLFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTGKKVHSYVKNCKVE 272
Query: 264 NEDPLDNLLVSMYTKCGDLE-------------------------------LARRVFDAV 292
+ L+N ++ MY CG+++ +AR FD +
Sbjct: 273 SNLVLENAMIDMYADCGEMDSALGIFRSMNNRDIISWTTIVSGFTNLGEIDVARNYFDKM 332
Query: 293 LEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGK 352
EK WT+MI GY + EA+ LF+ + T+V+P+E T+ + L+ACA LG+L G+
Sbjct: 333 PEKDYVSWTAMIDGYIRSNRFKEALELFRNMQATNVKPDEFTMVSVLTACAHLGALELGE 392
Query: 353 EIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHG 412
I YI N ++++ V+ +LI M+ KCG ++KA+ +F + +D W+AMI G A++G
Sbjct: 393 WIRTYIDRNKIKNDLFVRNALIDMYFKCGDVDKAESIFREMSQRDKFTWTAMIVGLAVNG 452
Query: 413 MGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEH 472
G++AL++F M L PD + Y +LSAC+H+G+VD G +F M S GIEP+I H
Sbjct: 453 HGEKALDMFSNMLKASIL-PDEITYIGVLSACTHTGLVDKGRKYFLRMTSQHGIEPNIAH 511
Query: 473 YLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLN 532
Y CLVDLL RAGR A + I MP++ + VW LL+ C + ++ E K +L L
Sbjct: 512 YGCLVDLLARAGRLKEAYEVIENMPIKANSIVWGALLAGCRVYRESDMAEMVVKQILELE 571
Query: 533 PGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSH 592
P + Y+L+ N++ + W + R +M D+ + K PG S +E++G V FVAGDRSH
Sbjct: 572 PDNGAVYVLLCNIYAACKRWNDLRELRQMMMDKGIKKXPGCSLIEMNGRVHEFVAGDRSH 631
Query: 593 HLSVDIRKTLKELHIKLLEAGY 614
+ +I L ++ L AGY
Sbjct: 632 PQTKNIDAKLDKMTQDLKLAGY 653
Score = 211 bits (538), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 144/489 (29%), Positives = 244/489 (49%), Gaps = 53/489 (10%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MIR + + +S Y ML+ GV + +TFP + K ++ G+++H HVLK G
Sbjct: 110 MIRGYSRLDFPQLGVSLYLEMLRRGVKPDRYTFPFLFKGFTRDIALEYGRQLHGHVLKHG 169
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEA--- 117
Q + FV T L+ MY C ++R V D P V++WN IISA+++ +E+
Sbjct: 170 LQYNVFVHTALVQMYLLCGQLDTARGVFDVCPK--ADVITWNMIISAYNKVGKFEESRRL 227
Query: 118 ILVLKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMS 173
LV+++ VL + T V V+S CS R G +H V + +N + L N+++
Sbjct: 228 FLVMEDKQVLP---TTVTLVLVLSACSKLKDLRTGKKVHSYVKNCKVESNLV-LENAMID 283
Query: 174 MYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVN-------------------- 213
MYA G+++ A IF + I+SWTTI+ G+ N+G ++
Sbjct: 284 MYADCGEMDSALGIFRSMNNRDIISWTTIVSGFTNLGEIDVARNYFDKMPEKDYVSWTAM 343
Query: 214 -----------EAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGY 262
EA L M+ +V PD ++++ CA +G L L + + + ++
Sbjct: 344 IDGYIRSNRFKEALELFRNMQATNVKPDEFTMVSVLTACAHLGALELGEWIRTYIDRNKI 403
Query: 263 NNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKR 322
N+ + N L+ MY KCGD++ A +F + ++ F WT+MI G A G+ +A+++F
Sbjct: 404 KNDLFVRNALIDMYFKCGDVDKAESIFREMSQRDKFTWTAMIVGLAVNGHGEKALDMFSN 463
Query: 323 LLKTSVRPNEATLATTLSACAELGSLSKGKE-IEEYIVLNGLESNRQVQTSLIHMFSKCG 381
+LK S+ P+E T LSAC G + KG++ +G+E N L+ + ++ G
Sbjct: 464 MLKASILPDEITYIGVLSACTHTGLVDKGRKYFLRMTSQHGIEPNIAHYGCLVDLLARAG 523
Query: 382 RINKAKEVFERVPDK-DLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPD----AVV 436
R+ +A EV E +P K + VW A++ G ++ D A + ++ + L+PD V+
Sbjct: 524 RLKEAYEVIENMPIKANSIVWGALLAGCRVYRESDMAEMV---VKQILELEPDNGAVYVL 580
Query: 437 YTSILSACS 445
+I +AC
Sbjct: 581 LCNIYAACK 589
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 91/409 (22%), Positives = 180/409 (44%), Gaps = 51/409 (12%)
Query: 9 GSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQ 68
G FEE+ + M V + T LVL AC+ + + GK+VHS+V + + ++
Sbjct: 219 GKFEESRRLFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTGKKVHSYVKNCKVESNLVLE 278
Query: 69 TGLIDMYSKCSDFVS-------------------------------SRKVLDEMPVRLRS 97
+IDMY+ C + S +R D+MP +
Sbjct: 279 NAMIDMYADCGEMDSALGIFRSMNNRDIISWTTIVSGFTNLGEIDVARNYFDKMPE--KD 336
Query: 98 VVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYK 157
VSW ++I + R+ EA+ + + M ++ T VSV++ C+ + + +
Sbjct: 337 YVSWTAMIDGYIRSNRFKEALELFRNMQATNVKPDEFTMVSVLTACAHLGALELGEWIRT 396
Query: 158 L---GLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNE 214
+ N++ + N+++ MY K G V++A SIF E+ + +WT +I G G+ +
Sbjct: 397 YIDRNKIKNDLFVRNALIDMYFKCGDVDKAESIFREMSQRDKFTWTAMIVGLAVNGHGEK 456
Query: 215 AFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNL--L 272
A + + M + S+ PD + ++ ++ C G L + L + S + E + + L
Sbjct: 457 ALDMFSNMLKASILPDEITYIGVLSACTHTG-LVDKGRKYFLRMTSQHGIEPNIAHYGCL 515
Query: 273 VSMYTKCGDLELARRVFDAV-LEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPN 331
V + + G L+ A V + + ++ + +W +++ G A + K++L+ + P+
Sbjct: 516 VDLLARAGRLKEAYEVIENMPIKANSIVWGALLAGCRVYRESDMAEMVVKQILE--LEPD 573
Query: 332 EAT----LATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHM 376
L +AC L +E+ + ++ G++ + SLI M
Sbjct: 574 NGAVYVLLCNIYAACKRWNDL---RELRQMMMDKGIK--KXPGCSLIEM 617
>gi|357516905|ref|XP_003628741.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355522763|gb|AET03217.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 758
Score = 337 bits (864), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 201/591 (34%), Positives = 319/591 (53%), Gaps = 26/591 (4%)
Query: 33 FPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMP 92
F +L++C N + ++ + ++ G + + FV I S+ +RK+ D++P
Sbjct: 15 FITLLRSCKNYERL---HQIQAQIVTHGLEHNDFVAPNFITTCSRFKRIHHARKLFDKIP 71
Query: 93 VRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCS----FRQG 148
+ +WN++ + + + + +++ E+ + + TF ++ C R+G
Sbjct: 72 --QPNTATWNAMFRGYLQNGHHRDTVVLFGELNRIAGMPNCFTFPMIIKSCGKLEGVREG 129
Query: 149 ISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVN 208
+HCC K G +N +A S++ MY+K G V +A +F E+ E ++V WT II GY+
Sbjct: 130 EEVHCCATKHGFKSNSF-VATSLIDMYSKKGCVEDAYKVFGEMHERNVVVWTAIINGYIL 188
Query: 209 VGNVNEAFGLCNQMRRMSVTP--DLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNED 266
G+V + R + P D+V++ LI G + N+ A + + N D
Sbjct: 189 CGDV------VSGRRLFDLAPERDVVMWSVLISGYIESKNMAAARELFDKM-----PNRD 237
Query: 267 PLD-NLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLL- 324
+ N +++ Y G++E+ +VFD + E++VF W +IGGY + G SE + FKR+L
Sbjct: 238 TMSWNAMLNGYAVNGEVEMFEKVFDEMPERNVFSWNGLIGGYVKNGLFSETLESFKRMLV 297
Query: 325 KTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRIN 384
+ V PN+ TL LSAC+ LG+L GK + Y G + N V LI M++KCG I
Sbjct: 298 EGHVIPNDFTLVAVLSACSRLGALDMGKWVHVYAESIGYKGNLFVGNVLIDMYAKCGVIE 357
Query: 385 KAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSAC 444
A VF + KD+ W+ +ING AIHG AL +F +M+ EG +PD V + ILSAC
Sbjct: 358 NAVVVFNCLDRKDIISWNTIINGLAIHGHAPDALGMFDRMKS-EGEEPDGVTFVGILSAC 416
Query: 445 SHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQV 504
+H G+V DG +FKSM ++ I P IEHY C+VDLLGRAG D AL I +MP+E A +
Sbjct: 417 THMGLVKDGFLYFKSMVDHYSIVPQIEHYGCMVDLLGRAGLLDQALNFIRKMPIEPDAVI 476
Query: 505 WAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDD 564
WA LL AC + NVE+ E A + L+ L P + N+++++N++ G ++ A + M D
Sbjct: 477 WAALLGACRLYKNVEIAELALQRLIELEPNNPANFVMVSNIYKDLGRSEDVARLKIAMRD 536
Query: 565 RRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKELHIKLLEAGYI 615
K PG S +E + SV F + D H + I + LK L + L GY+
Sbjct: 537 TGFRKLPGCSVIECNDSVVEFYSLDERHSETESIYRVLKGLTMLLRSHGYV 587
Score = 166 bits (419), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 117/448 (26%), Positives = 208/448 (46%), Gaps = 48/448 (10%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
M R NG +T+ + + + N FTFP+++K+C + + +G+ VH K G
Sbjct: 81 MFRGYLQNGHHRDTVVLFGELNRIAGMPNCFTFPMIIKSCGKLEGVREGEEVHCCATKHG 140
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F+ ++FV T LIDMYSK + KV EM R+VV W +II+ + C + ++
Sbjct: 141 FKSNSFVATSLIDMYSKKGCVEDAYKVFGEM--HERNVVVWTAIINGYI-LCGD---VVS 194
Query: 121 LKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGK 180
+ ++ L E + ++SG + ++ ++ + N + N++++ YA G+
Sbjct: 195 GRRLFDLAPERDVVMWSVLISGYIESKNMAAARELFD-KMPNRDTMSWNAMLNGYAVNGE 253
Query: 181 VNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRM----SVTPDLVVFLN 236
V +FDE+ E ++ SW +IGGYV G +E +RM V P+ +
Sbjct: 254 VEMFEKVFDEMPERNVFSWNGLIGGYVKNGLFSETL---ESFKRMLVEGHVIPNDFTLVA 310
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
++ C+++G L + +H GY + N+L+ MY KCG +E A VF+ + K
Sbjct: 311 VLSACSRLGALDMGKWVHVYAESIGYKGNLFVGNVLIDMYAKCGVIENAVVVFNCLDRKD 370
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEE 356
+ W ++I G A G+ +A+ +F R+ P+ T LSAC +G + G
Sbjct: 371 IISWNTIINGLAIHGHAPDALGMFDRMKSEGEEPDGVTFVGILSACTHMGLVKDG----- 425
Query: 357 YIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQ 416
++ + + + + H + M++ G+ DQ
Sbjct: 426 FLYFKSMVDHYSIVPQIEH-------------------------YGCMVDLLGRAGLLDQ 460
Query: 417 ALNLFYKMQHVEGLKPDAVVYTSILSAC 444
ALN KM ++PDAV++ ++L AC
Sbjct: 461 ALNFIRKMP----IEPDAVIWAALLGAC 484
>gi|359482590|ref|XP_002284545.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Vitis vinifera]
Length = 648
Score = 337 bits (864), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 176/490 (35%), Positives = 281/490 (57%), Gaps = 7/490 (1%)
Query: 129 LELSASTFVSVVSGCSFRQGI----SMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEA 184
L + S + S++ C R+ I +H V G + + +A ++++Y ++ A
Sbjct: 71 LTPTYSNYASLLQSCIARKAIKPGKQLHAQVCLAGFGFDTV-IATKLVNLYCVCDSLSSA 129
Query: 185 RSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQV 244
R +FD I + +I W +I GY G A L QM + PD F ++ CA +
Sbjct: 130 RLLFDRIPKHNIFLWNVLIRGYAWNGPYEAAVQLYYQMFDYGLVPDNFTFPFVLKACAAL 189
Query: 245 GNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMI 304
+ +H ++++G+ + + L+ MY KCG + AR VFD +L + LW SM+
Sbjct: 190 SAIEHGREIHEHVVQTGWEKDVFVGAALIDMYAKCGCVGSAREVFDKILVRDAVLWNSML 249
Query: 305 GGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLE 364
Y+Q G+P ++L ++ T +RP EATL T +SA A+ +L +G+E+ E
Sbjct: 250 AAYSQNGHPDACLSLCSEMVLTGLRPTEATLVTAISASADNAALPQGRELHGLSWRQEFE 309
Query: 365 SNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKM 424
S+ +V+T+L+ M++KCG + A+ +FER+ K + W+AMI GYA+HG +AL+LF +M
Sbjct: 310 SHDKVKTALVDMYAKCGSVRVARNLFERLGVKRVVSWNAMITGYAMHGHATEALDLFEEM 369
Query: 425 QHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAG 484
V KPD + + +LSACSH G++++G FF++M ++ I+P+++HY C+VDLLG +G
Sbjct: 370 NRVA--KPDHITFVGVLSACSHGGLLEEGWMFFETMIRDYKIDPTVQHYTCMVDLLGHSG 427
Query: 485 RFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMAN 544
R D A I +M V + VW LL++C H NVELGE A + L+ L P GNY++++N
Sbjct: 428 RLDEAYNLIMQMKVLPDSGVWGALLNSCKIHANVELGEIALERLIELEPDDAGNYVILSN 487
Query: 545 LFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKE 604
++ AG W+ A R LM DRRL K S +E+ V F++GD SH LS +I L+
Sbjct: 488 IYAQAGKWEGVAKLRKLMTDRRLKKSIACSWIEVKNKVHAFLSGDTSHPLSDEIYSELER 547
Query: 605 LHIKLLEAGY 614
+ + EAGY
Sbjct: 548 VGGLMKEAGY 557
Score = 165 bits (417), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 116/446 (26%), Positives = 213/446 (47%), Gaps = 23/446 (5%)
Query: 36 VLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRL 95
+L++C +I GK++H+ V GF D + T L+++Y C S+R + D +P
Sbjct: 81 LLQSCIARKAIKPGKQLHAQVCLAGFGFDTVIATKLVNLYCVCDSLSSARLLFDRIPK-- 138
Query: 96 RSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGC----SFRQGISM 151
++ WN +I ++ + A+ + +M+ GL TF V+ C + G +
Sbjct: 139 HNIFLWNVLIRGYAWNGPYEAAVQLYYQMFDYGLVPDNFTFPFVLKACAALSAIEHGREI 198
Query: 152 HCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGN 211
H V + G ++ + +++ MYAK G V AR +FD+I V W +++ Y G+
Sbjct: 199 HEHVVQTG-WEKDVFVGAALIDMYAKCGCVGSAREVFDKILVRDAVLWNSMLAAYSQNGH 257
Query: 212 VNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNL 271
+ LC++M + P + I A L +H L + + + D +
Sbjct: 258 PDACLSLCSEMVLTGLRPTEATLVTAISASADNAALPQGRELHGLSWRQEFESHDKVKTA 317
Query: 272 LVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPN 331
LV MY KCG + +AR +F+ + K V W +MI GYA G+ +EA++LF+ + + + +P+
Sbjct: 318 LVDMYAKCGSVRVARNLFERLGVKRVVSWNAMITGYAMHGHATEALDLFEEMNRVA-KPD 376
Query: 332 EATLATTLSACAELGSLSKGKEIEEYIVLN-GLESNRQVQTSLIHMFSKCGRINKAKEVF 390
T LSAC+ G L +G E ++ + ++ Q T ++ + GR+++A +
Sbjct: 377 HITFVGVLSACSHGGLLEEGWMFFETMIRDYKIDPTVQHYTCMVDLLGHSGRLDEAYNLI 436
Query: 391 ER---VPDKDLAVWSAMINGYAIHG---MGDQALNLFYKMQHVEGLKPDAVVYTSILSAC 444
+ +PD VW A++N IH +G+ AL + L+PD ILS
Sbjct: 437 MQMKVLPDS--GVWGALLNSCKIHANVELGEIALERLIE------LEPDDAGNYVILSNI 488
Query: 445 SHSGMVDDGLSFFKSMQSNFGIEPSI 470
+G++ + + ++ ++ SI
Sbjct: 489 YAQAGKWEGVAKLRKLMTDRRLKKSI 514
Score = 161 bits (408), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 120/455 (26%), Positives = 220/455 (48%), Gaps = 67/455 (14%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+IR NG +E + Y M G+ ++FTFP VLKACA +++I G+ +H HV++ G
Sbjct: 147 LIRGYAWNGPYEAAVQLYYQMFDYGLVPDNFTFPFVLKACAALSAIEHGREIHEHVVQTG 206
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+++D FV LIDMY+KC S+R+V D++ V R V WNS+++A+S+ D + +
Sbjct: 207 WEKDVFVGAALIDMYAKCGCVGSAREVFDKILV--RDAVLWNSMLAAYSQNGHPDACLSL 264
Query: 121 LKEMWVLGLELSASTFVSVVSG----CSFRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
EM + GL + +T V+ +S + QG +H ++ +++ + +++ MYA
Sbjct: 265 CSEMVLTGLRPTEATLVTAISASADNAALPQGRELHGLSWRQEFESHD-KVKTALVDMYA 323
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K G V AR++F+ +G +VSW +I GY G+ EA L +M R++ PD + F+
Sbjct: 324 KCGSVRVARNLFERLGVKRVVSWNAMITGYAMHGHATEALDLFEEMNRVA-KPDHITFVG 382
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
++ C+ G LL+ G+ + + D ++ +
Sbjct: 383 VLSACSHGG-----------LLEEGW-------------------MFFETMIRDYKIDPT 412
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSAC-----AELGSLSKG 351
V +T M+ G EA NL +++ V P+ L++C ELG ++
Sbjct: 413 VQHYTCMVDLLGHSGRLDEAYNL---IMQMKVLPDSGVWGALLNSCKIHANVELGEIA-- 467
Query: 352 KEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDL-----AVW----- 401
+E I L ++ V S +++++ G+ ++ + + D+ L W
Sbjct: 468 --LERLIELEPDDAGNYVILS--NIYAQAGKWEGVAKLRKLMTDRRLKKSIACSWIEVKN 523
Query: 402 --SAMINGYAIHGMGDQALNLFYKMQHVEGLKPDA 434
A ++G H + D+ ++ +++ V GL +A
Sbjct: 524 KVHAFLSGDTSHPLSDE---IYSELERVGGLMKEA 555
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 93/186 (50%), Gaps = 3/186 (1%)
Query: 326 TSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINK 385
T + P + A+ L +C ++ GK++ + L G + + T L++++ C ++
Sbjct: 69 TCLTPTYSNYASLLQSCIARKAIKPGKQLHAQVCLAGFGFDTVIATKLVNLYCVCDSLSS 128
Query: 386 AKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACS 445
A+ +F+R+P ++ +W+ +I GYA +G + A+ L+Y+M GL PD + +L AC+
Sbjct: 129 ARLLFDRIPKHNIFLWNVLIRGYAWNGPYEAAVQLYYQMFDY-GLVPDNFTFPFVLKACA 187
Query: 446 HSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVW 505
++ G + + G E + L+D+ + G A + ++ V A +W
Sbjct: 188 ALSAIEHGREIHEHVVQT-GWEKDVFVGAALIDMYAKCGCVGSAREVFDKILVR-DAVLW 245
Query: 506 APLLSA 511
+L+A
Sbjct: 246 NSMLAA 251
>gi|356529693|ref|XP_003533423.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65570-like [Glycine max]
Length = 676
Score = 337 bits (864), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 199/604 (32%), Positives = 330/604 (54%), Gaps = 24/604 (3%)
Query: 15 LSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDM 74
++ YSS++ H S T L+A VH++V+K GF +F+ LID
Sbjct: 1 MNFYSSLIAQSAHTKSLT---TLRA------------VHTNVIKSGFSY-SFLGHKLIDG 44
Query: 75 YSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSAS 134
Y KC +RK+ DE+P R +V+WNS+IS+H + EA+ M + G+ A
Sbjct: 45 YIKCGSLAEARKLFDELPSR--HIVTWNSMISSHISHGKSKEAVEFYGNMLMEGVLPDAY 102
Query: 135 TFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDE 190
TF ++ S R G H LGL + +A++++ MYAKF K+ +A +F
Sbjct: 103 TFSAISKAFSQLGLIRHGQRAHGLAVVLGLEVLDGFVASALVDMYAKFDKMRDAHLVFRR 162
Query: 191 IGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLA 250
+ E +V +T +I GY G EA + M V P+ +++ C +G+L
Sbjct: 163 VLEKDVVLFTALIVGYAQHGLDGEALKIFEDMVNRGVKPNEYTLACILINCGNLGDLVNG 222
Query: 251 LSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQL 310
+H L++KSG + L++MY++C +E + +VF+ + + WTS + G Q
Sbjct: 223 QLIHGLVVKSGLESVVASQTSLLTMYSRCNMIEDSIKVFNQLDYANQVTWTSFVVGLVQN 282
Query: 311 GYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQ 370
G AV++F+ +++ S+ PN TL++ L AC+ L L G++I + GL+ N+
Sbjct: 283 GREEVAVSIFREMIRCSISPNPFTLSSILQACSSLAMLEVGEQIHAITMKLGLDGNKYAG 342
Query: 371 TSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGL 430
+LI+++ KCG ++KA+ VF+ + + D+ ++MI YA +G G +AL LF +++++ GL
Sbjct: 343 AALINLYGKCGNMDKARSVFDVLTELDVVAINSMIYAYAQNGFGHEALELFERLKNM-GL 401
Query: 431 KPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLAL 490
P+ V + SIL AC+++G+V++G F S+++N IE +I+H+ C++DLLGR+ R + A
Sbjct: 402 VPNGVTFISILLACNNAGLVEEGCQIFASIRNNHNIELTIDHFTCMIDLLGRSRRLEEAA 461
Query: 491 KTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSAG 550
I E+ +W LL++C H VE+ E +L L PG G +IL+ NL+ SAG
Sbjct: 462 MLIEEVR-NPDVVLWRTLLNSCKIHGEVEMAEKVMSKILELAPGDGGTHILLTNLYASAG 520
Query: 551 MWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKELHIKLL 610
W + + + D +L K P S V++D V F+AGD SH S++I + L L K+
Sbjct: 521 KWNQVIEMKSTIRDLKLKKSPAMSWVDVDREVHTFMAGDLSHPRSLEIFEMLHGLMKKVK 580
Query: 611 EAGY 614
GY
Sbjct: 581 TLGY 584
Score = 174 bits (442), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 116/434 (26%), Positives = 220/434 (50%), Gaps = 17/434 (3%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI + ++G +E + Y +ML GV +++TF + KA + + I G+R H + +G
Sbjct: 72 MISSHISHGKSKEAVEFYGNMLMEGVLPDAYTFSAISKAFSQLGLIRHGQRAHGLAVVLG 131
Query: 61 FQ-QDAFVQTGLIDMYSKCSDFVSS----RKVLDEMPVRLRSVVSWNSIISAHSRACLND 115
+ D FV + L+DMY+K + R+VL+ + VV + ++I +++ L+
Sbjct: 132 LEVLDGFVASALVDMYAKFDKMRDAHLVFRRVLE------KDVVLFTALIVGYAQHGLDG 185
Query: 116 EAILVLKEMWVLGLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSV 171
EA+ + ++M G++ + T ++ C G +H V K G L + + S+
Sbjct: 186 EALKIFEDMVNRGVKPNEYTLACILINCGNLGDLVNGQLIHGLVVKSG-LESVVASQTSL 244
Query: 172 MSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDL 231
++MY++ + ++ +F+++ + V+WT+ + G V G A + +M R S++P+
Sbjct: 245 LTMYSRCNMIEDSIKVFNQLDYANQVTWTSFVVGLVQNGREEVAVSIFREMIRCSISPNP 304
Query: 232 VVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDA 291
+++ C+ + L + +H++ +K G + L+++Y KCG+++ AR VFD
Sbjct: 305 FTLSSILQACSSLAMLEVGEQIHAITMKLGLDGNKYAGAALINLYGKCGNMDKARSVFDV 364
Query: 292 VLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKG 351
+ E V SMI YAQ G+ EA+ LF+RL + PN T + L AC G + +G
Sbjct: 365 LTELDVVAINSMIYAYAQNGFGHEALELFERLKNMGLVPNGVTFISILLACNNAGLVEEG 424
Query: 352 KEIEEYIVLN-GLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAI 410
+I I N +E T +I + + R+ +A + E V + D+ +W ++N I
Sbjct: 425 CQIFASIRNNHNIELTIDHFTCMIDLLGRSRRLEEAAMLIEEVRNPDVVLWRTLLNSCKI 484
Query: 411 HGMGDQALNLFYKM 424
HG + A + K+
Sbjct: 485 HGEVEMAEKVMSKI 498
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 90/375 (24%), Positives = 181/375 (48%), Gaps = 22/375 (5%)
Query: 13 ETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLI 72
E L + M+ GV N +T +L C N+ + +G+ +H V+K G + QT L+
Sbjct: 186 EALKIFEDMVNRGVKPNEYTLACILINCGNLGDLVNGQLIHGLVVKSGLESVVASQTSLL 245
Query: 73 DMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELS 132
MYS+C+ S KV +++ + V+W S + + + A+ + +EM + +
Sbjct: 246 TMYSRCNMIEDSIKVFNQLD--YANQVTWTSFVVGLVQNGREEVAVSIFREMIRCSISPN 303
Query: 133 ASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIF 188
T S++ CS G +H KLGL N+ A +++++Y K G +++ARS+F
Sbjct: 304 PFTLSSILQACSSLAMLEVGEQIHAITMKLGLDGNKYAGA-ALINLYGKCGNMDKARSVF 362
Query: 189 DEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLF 248
D + E +V+ ++I Y G +EA L +++ M + P+ V F++++L C G +
Sbjct: 363 DVLTELDVVAINSMIYAYAQNGFGHEALELFERLKNMGLVPNGVTFISILLACNNAGLVE 422
Query: 249 LALSMHSLLLKSGYNNEDPLDNL--LVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGG 306
+ + +++ +N E +D+ ++ + + LE A + + V V LW +++
Sbjct: 423 EGCQIFA-SIRNNHNIELTIDHFTCMIDLLGRSRRLEEAAMLIEEVRNPDVVLWRTLLNS 481
Query: 307 YAQLGYPSEAVNLFKRLLKTSVRPNEA---TLATTLSACA-------ELGSLSKGKEIEE 356
G A + ++L+ + P + L T L A A E+ S + ++++
Sbjct: 482 CKIHGEVEMAEKVMSKILELA--PGDGGTHILLTNLYASAGKWNQVIEMKSTIRDLKLKK 539
Query: 357 YIVLNGLESNRQVQT 371
++ ++ +R+V T
Sbjct: 540 SPAMSWVDVDREVHT 554
>gi|218186186|gb|EEC68613.1| hypothetical protein OsI_36980 [Oryza sativa Indica Group]
Length = 981
Score = 337 bits (863), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 192/625 (30%), Positives = 335/625 (53%), Gaps = 15/625 (2%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI ++ G + +S M G+ ++ T ++ CA+ + G +HS L+
Sbjct: 217 MISMYSHQGICSKCFLVFSDMRHHGLRPDATTLCSLMSVCASADHFSHGSGIHSLCLRSS 276
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
V L++MYS + + M R ++SWN++IS++ + C + +A+
Sbjct: 277 LDSSVTVINALVNMYSAAGKLSDAEFLFWNMS--RRDLISWNTMISSYVQNCNSTDALKT 334
Query: 121 LKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
L +++ + TF S + CS G +H V +L L N + + NS+++MY
Sbjct: 335 LGQLFHTNEIPNHLTFSSALGACSSPGALIDGKMVHAIVLQLSLQRN-LLVGNSLITMYG 393
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K + +A +F + +VS+ +IGGY + + +A + + +R + P+ + +N
Sbjct: 394 KCNSMEDAEKVFQSMPTHDVVSYNVLIGGYAVLEDGTKAMQVFSWIRSAGIKPNYITMIN 453
Query: 237 LILGCAQVGNLF-LALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEK 295
+ +L +H+ ++++G+ +++ + N L++MY KCG+LE + +F+++ K
Sbjct: 454 IHGSFTSSNDLHNYGRPLHAYIIRTGFLSDEYVANSLITMYAKCGNLESSTNIFNSITNK 513
Query: 296 SVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIE 355
++ W ++I AQLG+ EA+ LF + + + LA LS+CA L SL +G ++
Sbjct: 514 NIVSWNAIIAANAQLGHGEEALKLFIDMQHAGNKLDRVCLAECLSSCASLASLEEGMQLH 573
Query: 356 EYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDL---AVWSAMINGYAIHG 412
+ +GL+S+ V + + M+ KCG++N E+ + VPD+ + W+ +I+GYA +G
Sbjct: 574 GLGMKSGLDSDSYVVNAAMDMYGKCGKMN---EMLQMVPDQAIRPQQCWNTLISGYAKYG 630
Query: 413 MGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEH 472
+A F +M + G KPD V + ++LSACSH+G+VD G+ ++ SM S+FG+ P I+H
Sbjct: 631 YFKEAEETFKQMVAM-GRKPDYVTFVALLSACSHAGLVDKGIDYYNSMASSFGVSPGIKH 689
Query: 473 YLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLN 532
+C+VDLLGR GRF A + I EMPV +W LLS+ H N+E+G AAK LL L+
Sbjct: 690 CVCIVDLLGRLGRFAEAERFIEEMPVLPNDLIWRSLLSSSRTHKNLEIGRKAAKKLLELD 749
Query: 533 PGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSH 592
P Y+L++NL+ + W + R M + K P S +++ V F GDR H
Sbjct: 750 PFDDSAYVLLSNLYATNARWVDVDKLRSHMKTININKRPACSWLKLKNEVSTFGIGDRGH 809
Query: 593 HLSVDIRKTLKELHIKLLEAGYIAE 617
+ I L E+ +KL E GYIA+
Sbjct: 810 KHAEKIYAKLDEMLLKLREVGYIAD 834
Score = 218 bits (555), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 146/549 (26%), Positives = 266/549 (48%), Gaps = 15/549 (2%)
Query: 6 TNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDA 65
++NG EETL Y M + GV N+ F V+ C ++ + G +V SHV+ G Q
Sbjct: 121 SSNGYLEETLRAYRQMRREGVPCNANAFATVVSLCGSLENEVPGLQVASHVIVSGLQNQV 180
Query: 66 FVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMW 125
V LI M+ + K+ D M +S N++IS +S + + LV +M
Sbjct: 181 SVANSLITMFGNLGRVQDAEKLFDRMEE--HDTISRNAMISMYSHQGICSKCFLVFSDMR 238
Query: 126 VLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKV 181
GL A+T S++S C+ F G +H + L++ + + N++++MY+ GK+
Sbjct: 239 HHGLRPDATTLCSLMSVCASADHFSHGSGIHSLCLR-SSLDSSVTVINALVNMYSAAGKL 297
Query: 182 NEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGC 241
++A +F + ++SW T+I YV N +A Q+ + P+ + F + + C
Sbjct: 298 SDAEFLFWNMSRRDLISWNTMISSYVQNCNSTDALKTLGQLFHTNEIPNHLTFSSALGAC 357
Query: 242 AQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWT 301
+ G L +H+++L+ + N L++MY KC +E A +VF ++ V +
Sbjct: 358 SSPGALIDGKMVHAIVLQLSLQRNLLVGNSLITMYGKCNSMEDAEKVFQSMPTHDVVSYN 417
Query: 302 SMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSK-GKEIEEYIVL 360
+IGGYA L ++A+ +F + ++PN T+ + L G+ + YI+
Sbjct: 418 VLIGGYAVLEDGTKAMQVFSWIRSAGIKPNYITMINIHGSFTSSNDLHNYGRPLHAYIIR 477
Query: 361 NGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNL 420
G S+ V SLI M++KCG + + +F + +K++ W+A+I A G G++AL L
Sbjct: 478 TGFLSDEYVANSLITMYAKCGNLESSTNIFNSITNKNIVSWNAIIAANAQLGHGEEALKL 537
Query: 421 FYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFK-SMQSNFGIEPSIEHYLCLVDL 479
F MQH G K D V LS+C+ +++G+ M+S + + + +D+
Sbjct: 538 FIDMQHA-GNKLDRVCLAECLSSCASLASLEEGMQLHGLGMKSGLDSDSYVVN--AAMDM 594
Query: 480 LGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNY 539
G+ G+ + L+ + + + Q Q W L+S K+ + E K ++ + G +Y
Sbjct: 595 YGKCGKMNEMLQMVPDQAIRPQ-QCWNTLISGYAKYGYFKEAEETFKQMVAM--GRKPDY 651
Query: 540 ILMANLFTS 548
+ L ++
Sbjct: 652 VTFVALLSA 660
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 117/427 (27%), Positives = 214/427 (50%), Gaps = 11/427 (2%)
Query: 21 MLQTGVHGNSFTFPLVLKAC---ANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSK 77
M + GV + F ++ AC I G +H+ + G + ++ T L+ +Y
Sbjct: 32 MRERGVPLSGFALASLVTACERRGRDEGIACGAAIHALTHRAGLMGNVYIGTALLHLYGS 91
Query: 78 CSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFV 137
+R++ EMP R +VVSW +++ A S +E + ++M G+ +A+ F
Sbjct: 92 RGIVSDARRLFWEMPER--NVVSWTALMVALSSNGYLEETLRAYRQMRREGVPCNANAFA 149
Query: 138 SVVSGCSFRQ----GISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGE 193
+VVS C + G+ + V GL N++ +ANS+++M+ G+V +A +FD + E
Sbjct: 150 TVVSLCGSLENEVPGLQVASHVIVSGL-QNQVSVANSLITMFGNLGRVQDAEKLFDRMEE 208
Query: 194 TSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSM 253
+S +I Y + G ++ F + + MR + PD +L+ CA + +
Sbjct: 209 HDTISRNAMISMYSHQGICSKCFLVFSDMRHHGLRPDATTLCSLMSVCASADHFSHGSGI 268
Query: 254 HSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYP 313
HSL L+S ++ + N LV+MY+ G L A +F + + + W +MI Y Q
Sbjct: 269 HSLCLRSSLDSSVTVINALVNMYSAAGKLSDAEFLFWNMSRRDLISWNTMISSYVQNCNS 328
Query: 314 SEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSL 373
++A+ +L T+ PN T ++ L AC+ G+L GK + ++ L+ N V SL
Sbjct: 329 TDALKTLGQLFHTNEIPNHLTFSSALGACSSPGALIDGKMVHAIVLQLSLQRNLLVGNSL 388
Query: 374 IHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPD 433
I M+ KC + A++VF+ +P D+ ++ +I GYA+ G +A+ +F ++ G+KP+
Sbjct: 389 ITMYGKCNSMEDAEKVFQSMPTHDVVSYNVLIGGYAVLEDGTKAMQVFSWIRSA-GIKPN 447
Query: 434 AVVYTSI 440
+ +I
Sbjct: 448 YITMINI 454
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 110/420 (26%), Positives = 199/420 (47%), Gaps = 22/420 (5%)
Query: 91 MPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCSFRQ--- 147
MP R S +W + +S R + A +L+ M G+ LS S+V+ C R
Sbjct: 1 MPDRTPS--TWYTAVSGCVRCGRDVAAFELLRGMRERGVPLSGFALASLVTACERRGRDE 58
Query: 148 ----GISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTII 203
G ++H ++ GL+ N + + +++ +Y G V++AR +F E+ E ++VSWT ++
Sbjct: 59 GIACGAAIHALTHRAGLMGN-VYIGTALLHLYGSRGIVSDARRLFWEMPERNVVSWTALM 117
Query: 204 GGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYN 263
+ G + E QMRR V + F ++ C + N L + S ++ SG
Sbjct: 118 VALSSNGYLEETLRAYRQMRREGVPCNANAFATVVSLCGSLENEVPGLQVASHVIVSGLQ 177
Query: 264 NEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRL 323
N+ + N L++M+ G ++ A ++FD + E +MI Y+ G S+ +F +
Sbjct: 178 NQVSVANSLITMFGNLGRVQDAEKLFDRMEEHDTISRNAMISMYSHQGICSKCFLVFSDM 237
Query: 324 LKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRI 383
+RP+ TL + +S CA S G I + + L+S+ V +L++M+S G++
Sbjct: 238 RHHGLRPDATTLCSLMSVCASADHFSHGSGIHSLCLRSSLDSSVTVINALVNMYSAAGKL 297
Query: 384 NKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSA 443
+ A+ +F + +DL W+ MI+ Y + AL ++ H + P+ + ++S L A
Sbjct: 298 SDAEFLFWNMSRRDLISWNTMISSYVQNCNSTDALKTLGQLFHTNEI-PNHLTFSSALGA 356
Query: 444 CSHSGMVDDG-----LSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPV 498
CS G + DG + S+Q N + S L+ + G+ + A K MP
Sbjct: 357 CSSPGALIDGKMVHAIVLQLSLQRNLLVGNS------LITMYGKCNSMEDAEKVFQSMPT 410
>gi|356574473|ref|XP_003555371.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g63370-like [Glycine max]
Length = 923
Score = 337 bits (863), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 198/627 (31%), Positives = 331/627 (52%), Gaps = 12/627 (1%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+I G E LS + M + GV N++TF L+ + + + G +H LK
Sbjct: 219 IISAHVTEGKCLEALSLFRRMQEVGVASNTYTFVAALQGVEDPSFVKLGMGIHGAALKSN 278
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
D +V LI MY+KC + +V M R VSWN+++S + L +A+
Sbjct: 279 HFADVYVANALIAMYAKCGRMEDAERVFASMLCR--DYVSWNTLLSGLVQNELYRDALNY 336
Query: 121 LKEMWVLGLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
++M + + +++++ + G +H + GL +N + + N+++ MYA
Sbjct: 337 FRDMQNSAQKPDQVSVLNLIAASGRSGNLLNGKEVHAYAIRNGLDSN-MQIGNTLIDMYA 395
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K V F+ + E ++SWTTII GY EA L +++ + D ++ +
Sbjct: 396 KCCCVKHMGYAFECMHEKDLISWTTIIAGYAQNECHLEAINLFRKVQVKGMDVDPMMIGS 455
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
++ C+ + + +H + K + L N +V++Y + G + ARR F+++ K
Sbjct: 456 VLRACSGLKSRNFIREIHGYVFKRDLA-DIMLQNAIVNVYGEVGHRDYARRAFESIRSKD 514
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEE 356
+ WTSMI G P EA+ LF L +T+++P+ + + LSA A L SL KGKEI
Sbjct: 515 IVSWTSMITCCVHNGLPVEALELFYSLKQTNIQPDSIAIISALSATANLSSLKKGKEIHG 574
Query: 357 YIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQ 416
+++ G + +SL+ M++ CG + ++++F V +DL +W++MIN +HG G++
Sbjct: 575 FLIRKGFFLEGPIASSLVDMYACCGTVENSRKMFHSVKQRDLILWTSMINANGMHGCGNE 634
Query: 417 ALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCL 476
A+ LF KM E + PD + + ++L ACSHSG++ +G FF+ M+ + +EP EHY C+
Sbjct: 635 AIALFKKMTD-ENVIPDHITFLALLYACSHSGLMVEGKRFFEIMKYGYQLEPWPEHYACM 693
Query: 477 VDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGST 536
VDLL R+ + A + + MP++ ++VW LL AC H N ELGE AAK LL + ++
Sbjct: 694 VDLLSRSNSLEEAYQFVRSMPIKPSSEVWCALLGACHIHSNKELGELAAKELLQSDTKNS 753
Query: 537 GNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSV 596
G Y L++N+F + G W + R M L K PG S +E+D + F+A D+SH +
Sbjct: 754 GKYALISNIFAADGRWNDVEEVRLRMKGNGLKKNPGCSWIEVDNKIHTFMARDKSHPQTD 813
Query: 597 DIRKTLKELHIKLL--EAGYIAEADIV 621
DI L + KLL + GYIA+ V
Sbjct: 814 DIYLKLAQF-TKLLGKKGGYIAQTKFV 839
Score = 224 bits (571), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 135/417 (32%), Positives = 226/417 (54%), Gaps = 12/417 (2%)
Query: 35 LVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVR 94
L+L C + ++ G+++H+ +LK AF+ T L+ MY KC + KV DEM R
Sbjct: 51 LLLDLCVAVKALPQGQQLHARLLKSHLS--AFLATKLLHMYEKCGSLKDAVKVFDEMTER 108
Query: 95 LRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCSF----RQGIS 150
++ +WN+++ A + EAI + KEM VLG+ + A TF SV+ C R G
Sbjct: 109 --TIFTWNAMMGAFVSSGKYLEAIELYKEMRVLGVAIDACTFPSVLKACGALGESRLGAE 166
Query: 151 MHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEI--GETSIVSWTTIIGGYVN 208
+H K G + + N++++MY K G + AR +FD I + VSW +II +V
Sbjct: 167 IHGVAVKCGF-GEFVFVCNALIAMYGKCGDLGGARVLFDGIMMEKEDTVSWNSIISAHVT 225
Query: 209 VGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPL 268
G EA L +M+ + V + F+ + G + L + +H LKS + + +
Sbjct: 226 EGKCLEALSLFRRMQEVGVASNTYTFVAALQGVEDPSFVKLGMGIHGAALKSNHFADVYV 285
Query: 269 DNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSV 328
N L++MY KCG +E A RVF ++L + W +++ G Q +A+N F+ + ++
Sbjct: 286 ANALIAMYAKCGRMEDAERVFASMLCRDYVSWNTLLSGLVQNELYRDALNYFRDMQNSAQ 345
Query: 329 RPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKE 388
+P++ ++ ++A G+L GKE+ Y + NGL+SN Q+ +LI M++KC +
Sbjct: 346 KPDQVSVLNLIAASGRSGNLLNGKEVHAYAIRNGLDSNMQIGNTLIDMYAKCCCVKHMGY 405
Query: 389 VFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACS 445
FE + +KDL W+ +I GYA + +A+NLF K+Q V+G+ D ++ S+L ACS
Sbjct: 406 AFECMHEKDLISWTTIIAGYAQNECHLEAINLFRKVQ-VKGMDVDPMMIGSVLRACS 461
Score = 221 bits (562), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 143/509 (28%), Positives = 256/509 (50%), Gaps = 9/509 (1%)
Query: 7 NNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAF 66
++G + E + Y M GV ++ TFP VLKAC + G +H +K GF + F
Sbjct: 122 SSGKYLEAIELYKEMRVLGVAIDACTFPSVLKACGALGESRLGAEIHGVAVKCGFGEFVF 181
Query: 67 VQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWV 126
V LI MY KC D +R + D + + VSWNSIISAH EA+ + + M
Sbjct: 182 VCNALIAMYGKCGDLGGARVLFDGIMMEKEDTVSWNSIISAHVTEGKCLEALSLFRRMQE 241
Query: 127 LGLELSASTFVSVVSGCSFRQGISMHCCVYKLGLLNN---EIPLANSVMSMYAKFGKVNE 183
+G+ + TFV+ + G + + ++ L +N ++ +AN++++MYAK G++ +
Sbjct: 242 VGVASNTYTFVAALQGVEDPSFVKLGMGIHGAALKSNHFADVYVANALIAMYAKCGRMED 301
Query: 184 ARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQ 243
A +F + VSW T++ G V +A M+ + PD V LNLI +
Sbjct: 302 AERVFASMLCRDYVSWNTLLSGLVQNELYRDALNYFRDMQNSAQKPDQVSVLNLIAASGR 361
Query: 244 VGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSM 303
GNL +H+ +++G ++ + N L+ MY KC ++ F+ + EK + WT++
Sbjct: 362 SGNLLNGKEVHAYAIRNGLDSNMQIGNTLIDMYAKCCCVKHMGYAFECMHEKDLISWTTI 421
Query: 304 IGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGL 363
I GYAQ EA+NLF+++ + + + + L AC+ L S + +EI Y+ L
Sbjct: 422 IAGYAQNECHLEAINLFRKVQVKGMDVDPMMIGSVLRACSGLKSRNFIREIHGYVFKRDL 481
Query: 364 ESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYK 423
++ +Q ++++++ + G + A+ FE + KD+ W++MI +G+ +AL LFY
Sbjct: 482 -ADIMLQNAIVNVYGEVGHRDYARRAFESIRSKDIVSWTSMITCCVHNGLPVEALELFYS 540
Query: 424 MQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSM-QSNFGIEPSIEHYLCLVDLLGR 482
++ ++PD++ S LSA ++ + G + + F +E I LVD+
Sbjct: 541 LKQTN-IQPDSIAIISALSATANLSSLKKGKEIHGFLIRKGFFLEGPIAS--SLVDMYAC 597
Query: 483 AGRFDLALKTIHEMPVEVQAQVWAPLLSA 511
G + + K H + + +W +++A
Sbjct: 598 CGTVENSRKMFHSVK-QRDLILWTSMINA 625
>gi|449464466|ref|XP_004149950.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC101216349
[Cucumis sativus]
Length = 1830
Score = 337 bits (863), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 211/637 (33%), Positives = 331/637 (51%), Gaps = 59/637 (9%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MIR N F + + Y+ M + ++ F ++LKAC+ + I +G++VH ++KVG
Sbjct: 1189 MIRWYFLNDLFVDVIPFYNRMRMSFRECDNIIFSIILKACSELREIVEGRKVHCQIVKVG 1248
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
D+FV TGLIDMY KC S V +E + ++VVSW S+I+ + + +E +++
Sbjct: 1249 -GPDSFVMTGLIDMYGKCGQVECSSAVFEE--IMDKNVVSWTSMIAGYVQNNCAEEGLVL 1305
Query: 121 LKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGLLN-NEIP--LANSVMSMYAK 177
M +E + T S+++ + + + V+ + N E+ LA + + MY K
Sbjct: 1306 FNRMRDALVESNPFTLGSIINAFTKLRALHQGKWVHGYAIKNIAELSSFLATTFLDMYVK 1365
Query: 178 FGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPD---LVVF 234
G+ +AR I+DE+ +VSWT +I GY N+ L R + P+ L VF
Sbjct: 1366 CGQTRDARMIYDELPTIDLVSWTVMIVGYTQARQPNDGLRLFADEIRSDLLPNSALLQVF 1425
Query: 235 LNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLE 294
+ FL N L+ MY KC + A +F VLE
Sbjct: 1426 FQRV--------RFL--------------------NALIDMYAKCHTISDAYAIFHGVLE 1457
Query: 295 KSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEI 354
K V W SMI GYAQ G +A+ LF ++ S+ P+ TL +TLSA A LG++ G +
Sbjct: 1458 KDVITWNSMISGYAQNGSAYDALRLFNQMRSYSLAPDAITLVSTLSASATLGAIQVGSSL 1517
Query: 355 EEYIVLNGL-ESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGM 413
Y V GL SN + T+L++ ++KCG A+ VF+ + K++ WSAMI GY + G
Sbjct: 1518 HAYSVKGGLFSSNLYIGTALLNFYAKCGDARSARMVFDSMGVKNIITWSAMIGGYGVQGD 1577
Query: 414 GDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHY 473
G +L++F M E LKP+ V++T++LSACS+SGMV++G +FKSM ++ PS++HY
Sbjct: 1578 GSGSLSIFSNMLK-EDLKPNEVIFTTVLSACSYSGMVEEGGRYFKSMIQDYNFVPSMKHY 1636
Query: 474 LCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNP 533
C+VDLL R+G+ D AL I +MPV+ ++ L C + +LGE + +L L+
Sbjct: 1637 ACMVDLLARSGKLDEALDFIKKMPVQRDVSLYGAFLHGCGLYSRFDLGEVVVREMLQLHR 1696
Query: 534 GSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEI------------DGS 581
Y+L++NL+ S G W + R LM R L K PG+S VE D
Sbjct: 1697 NEACYYVLVSNLYASDGKWGQVNEVRDLMLQRGLNKVPGYSLVETNAVXLMPTTVFCDNQ 1756
Query: 582 VQVFVAG-----DRSHHLSVD---IRKTLKELHIKLL 610
+ +A +R+ H+ +D +R + E +K+L
Sbjct: 1757 AAIAIASNPTFHERTKHIEIDCHFVRDKIVEGFLKVL 1793
Score = 145 bits (365), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 110/410 (26%), Positives = 181/410 (44%), Gaps = 34/410 (8%)
Query: 51 RVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSR 110
+ H ++ G + T L+ +Y D S+R V D+MP +W +I +
Sbjct: 1138 KFHGLLIVHGLIGNLLCDTKLVGVYGALGDVRSARMVFDQMPNP--DFYAWKVMIRWYFL 1195
Query: 111 ACLNDEAILVLKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIP 166
L + I M + E F ++ CS +G +HC + K+G ++ +
Sbjct: 1196 NDLFVDVIPFYNRMRMSFRECDNIIFSIILKACSELREIVEGRKVHCQIVKVGGPDSFV- 1254
Query: 167 LANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMS 226
++ MY K G+V + ++F+EI + ++VSWT++I GYV E L N+MR
Sbjct: 1255 -MTGLIDMYGKCGQVECSSAVFEEIMDKNVVSWTSMIAGYVQNNCAEEGLVLFNRMRDAL 1313
Query: 227 VTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELAR 286
V + ++I ++ L +H +K+ L + MY KCG AR
Sbjct: 1314 VESNPFTLGSIINAFTKLRALHQGKWVHGYAIKNIAELSSFLATTFLDMYVKCGQTRDAR 1373
Query: 287 RVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELG 346
++D + + WT MI GY Q P++ + LF +++ + PN A L L
Sbjct: 1374 MIYDELPTIDLVSWTVMIVGYTQARQPNDGLRLFADEIRSDLLPNSALLQVFFQRVRFL- 1432
Query: 347 SLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMIN 406
+LI M++KC I+ A +F V +KD+ W++MI+
Sbjct: 1433 ------------------------NALIDMYAKCHTISDAYAIFHGVLEKDVITWNSMIS 1468
Query: 407 GYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSF 456
GYA +G AL LF +M+ L PDA+ S LSA + G + G S
Sbjct: 1469 GYAQNGSAYDALRLFNQMRSY-SLAPDAITLVSTLSASATLGAIQVGSSL 1517
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 76/273 (27%), Positives = 133/273 (48%), Gaps = 2/273 (0%)
Query: 149 ISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVN 208
I H + GL+ N + ++ +Y G V AR +FD++ +W +I Y
Sbjct: 1137 IKFHGLLIVHGLIGN-LLCDTKLVGVYGALGDVRSARMVFDQMPNPDFYAWKVMIRWYFL 1195
Query: 209 VGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPL 268
+ N+MR D ++F ++ C+++ + +H ++K G + +
Sbjct: 1196 NDLFVDVIPFYNRMRMSFRECDNIIFSIILKACSELREIVEGRKVHCQIVKVGGPDSFVM 1255
Query: 269 DNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSV 328
L + MY KCG +E + VF+ +++K+V WTSMI GY Q E + LF R+ V
Sbjct: 1256 TGL-IDMYGKCGQVECSSAVFEEIMDKNVVSWTSMIAGYVQNNCAEEGLVLFNRMRDALV 1314
Query: 329 RPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKE 388
N TL + ++A +L +L +GK + Y + N E + + T+ + M+ KCG+ A+
Sbjct: 1315 ESNPFTLGSIINAFTKLRALHQGKWVHGYAIKNIAELSSFLATTFLDMYVKCGQTRDARM 1374
Query: 389 VFERVPDKDLAVWSAMINGYAIHGMGDQALNLF 421
+++ +P DL W+ MI GY + L LF
Sbjct: 1375 IYDELPTIDLVSWTVMIVGYTQARQPNDGLRLF 1407
>gi|357127001|ref|XP_003565175.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like [Brachypodium distachyon]
Length = 849
Score = 337 bits (863), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 199/600 (33%), Positives = 317/600 (52%), Gaps = 11/600 (1%)
Query: 32 TFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSR-KVLDE 90
T VL CA + G+ VH +K G+ V L+DMY+KC + + L+
Sbjct: 167 TLVTVLPMCAALAWPETGRAVHGLAVKSGWDAAPRVSNVLVDMYAKCGEMADAECAFLEA 226
Query: 91 MPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWV--LGLELSASTFVSVVSGCSFRQG 148
P R+VVSWN ++ ++R A +L+EM + G+ T +SV+ CS
Sbjct: 227 PPGAGRNVVSWNVMLGGYARNGEAGAAFGLLREMQMEERGVPADEITMLSVLPVCSGLPE 286
Query: 149 IS----MHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIG 204
++ +H V + GL + N++++ Y + G + A +FD I + SW +IG
Sbjct: 287 LAKLRELHAFVVRRGLHLTGDMVPNALIAAYGRCGCLLHACRVFDGICSKMVSSWNALIG 346
Query: 205 GYVNVGNVNEAFGLCNQMRRM-SVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYN 263
+ G + A L +M PD +L+L C + +L + H +L++G
Sbjct: 347 AHAQNGEASAAIELFREMTNACGQKPDWFSIGSLLLACGNLKHLLHGKAAHGFILRNGLE 406
Query: 264 NEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRL 323
+ + L+S+Y +CG LAR +FDAV EK W +MI GY+Q G P E++ LF+ +
Sbjct: 407 KDSFIRVSLLSVYIQCGRESLARVLFDAVEEKDEVSWNTMIAGYSQNGLPGESLQLFREM 466
Query: 324 L--KTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCG 381
K P+ + L AC+EL ++ GKE+ + + L + + +S+I M+SKCG
Sbjct: 467 QSKKGGHWPSLLAATSALVACSELPAVRLGKEMHCFALKADLCEDSFLSSSIIDMYSKCG 526
Query: 382 RINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSIL 441
++ A+ F+R+ KD W+ MI GYA++G G +A+ L+ KM EG++PD Y +L
Sbjct: 527 SVDDARVFFDRLKAKDAVSWTVMITGYAVNGRGKEAVGLYDKMGR-EGMEPDGFTYLGLL 585
Query: 442 SACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQ 501
AC H+GM++DGL FF+ M++ IE +EHY C++ +L RAGRF A+ + MP E
Sbjct: 586 MACGHAGMLEDGLCFFQEMRNLPKIEAKLEHYACVIGMLSRAGRFADAVALMEVMPEEPD 645
Query: 502 AQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGL 561
A++ + +LSAC H VELG+ A LL L P +Y+L +N++ + W E R +
Sbjct: 646 AKILSSVLSACHMHGEVELGKKVADKLLELEPHKAEHYVLASNMYAGSRQWDEMRKVRKM 705
Query: 562 MDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKELHIKLLEAGYIAEADIV 621
+ D + KEPG S ++I G V FVAG+ S +RK L K+ AGY + ++
Sbjct: 706 LRDAGVAKEPGCSWIDIAGKVYSFVAGENSLPEMHKVRKMWYSLEEKIRAAGYAPDTTVM 765
Score = 158 bits (400), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 99/358 (27%), Positives = 178/358 (49%), Gaps = 8/358 (2%)
Query: 97 SVVSWNSIISAHSRACLNDEAILVLKEMWVL--GLELSASTFVSVVSGCSFRQGISMHCC 154
S+ WN +++ SRA + +A+ +L + G+ T + C G +H
Sbjct: 29 SLPQWNGLLADLSRAGRHADALAILPRLLAASDGVAPDRFTLPPALKSCRGDDGRQVHAV 88
Query: 155 VYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNE 214
KLGL + + + NS++SMY + G+V++A +F+ + ++VSW ++ + E
Sbjct: 89 AAKLGLADGDPFVGNSLVSMYGRCGRVDDAEKVFEGMAGRNLVSWNALMAAVADPRRGLE 148
Query: 215 AFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVS 274
F C + + PD + ++ CA + ++H L +KSG++ + N+LV
Sbjct: 149 LFRDCLEDLGGTAAPDEATLVTVLPMCAALAWPETGRAVHGLAVKSGWDAAPRVSNVLVD 208
Query: 275 MYTKCGDLELARRVF---DAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFK--RLLKTSVR 329
MY KCG++ A F ++V W M+GGYA+ G A L + ++ + V
Sbjct: 209 MYAKCGEMADAECAFLEAPPGAGRNVVSWNVMLGGYARNGEAGAAFGLLREMQMEERGVP 268
Query: 330 PNEATLATTLSACAELGSLSKGKEIEEYIVLNGLE-SNRQVQTSLIHMFSKCGRINKAKE 388
+E T+ + L C+ L L+K +E+ ++V GL + V +LI + +CG + A
Sbjct: 269 ADEITMLSVLPVCSGLPELAKLRELHAFVVRRGLHLTGDMVPNALIAAYGRCGCLLHACR 328
Query: 389 VFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSH 446
VF+ + K ++ W+A+I +A +G A+ LF +M + G KPD S+L AC +
Sbjct: 329 VFDGICSKMVSSWNALIGAHAQNGEASAAIELFREMTNACGQKPDWFSIGSLLLACGN 386
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 95/367 (25%), Positives = 167/367 (45%), Gaps = 45/367 (12%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQT-GVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKV 59
+I NG + + M G + F+ +L AC N+ + GK H +L+
Sbjct: 344 LIGAHAQNGEASAAIELFREMTNACGQKPDWFSIGSLLLACGNLKHLLHGKAAHGFILRN 403
Query: 60 GFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAIL 119
G ++D+F++ L+ +Y +C +R + D V + VSWN++I+ +S+ L E++
Sbjct: 404 GLEKDSFIRVSLLSVYIQCGRESLARVLFDA--VEEKDEVSWNTMIAGYSQNGLPGESLQ 461
Query: 120 VLKEM-------WVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGLLNNEIPLANSVM 172
+ +EM W L + S V+ + R G MHC K L + L++S++
Sbjct: 462 LFREMQSKKGGHWP-SLLAATSALVACSELPAVRLGKEMHCFALKADLCEDSF-LSSSII 519
Query: 173 SMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLV 232
MY+K G V++AR FD + VSWT +I GY G EA GL ++M R + PD
Sbjct: 520 DMYSKCGSVDDARVFFDRLKAKDAVSWTVMITGYAVNGRGKEAVGLYDKMGREGMEPDGF 579
Query: 233 VFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAV 292
+L L++ C G +L+ G + NL
Sbjct: 580 TYLGLLMACGHAG-----------MLEDGLCFFQEMRNL-------------------PK 609
Query: 293 LEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGK 352
+E + + +IG ++ G ++AV L + + + P+ L++ LSAC G + GK
Sbjct: 610 IEAKLEHYACVIGMLSRAGRFADAVALMEVMPE---EPDAKILSSVLSACHMHGEVELGK 666
Query: 353 EIEEYIV 359
++ + ++
Sbjct: 667 KVADKLL 673
>gi|125603224|gb|EAZ42549.1| hypothetical protein OsJ_27115 [Oryza sativa Japonica Group]
Length = 696
Score = 337 bits (863), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 195/607 (32%), Positives = 323/607 (53%), Gaps = 13/607 (2%)
Query: 8 NGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFV 67
+G+ E +M G+ N+F L++ A G ++ S LK G + F
Sbjct: 71 SGAHPEAWRLLRAMHAQGLASNTFALGSALRSAAVARRPAIGAQLQSLALKSGLANNVFA 130
Query: 68 QTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVL 127
+ L+D+Y+KC +R+V D MP R + VSWN++I+ ++ + A+ + EM
Sbjct: 131 ASALLDVYAKCGRVRDARQVFDGMPER--NTVSWNALIAGYTESGDMASALELFLEMERE 188
Query: 128 GLELSASTFVSVVSGCSFRQGISMHCCVYKLGLLNNEIPLA--NSVMSMYAKFGKVNEAR 185
GL +TF S+++ MH K+ + + L N+ ++ Y++ G + ++R
Sbjct: 189 GLAPDEATFASLLTAVEGPSCFLMHQLHGKIVKYGSALGLTVLNAAITAYSQCGSLKDSR 248
Query: 186 SIFDEIGE-TSIVSWTTIIGGYVNVGNVNEAFGL-CNQMRRMSVTPDLVVFLNLILGCAQ 243
IFD IG+ ++SW ++G Y + G +EA M+ V PD+ F ++I C++
Sbjct: 249 RIFDGIGDIRDLISWNAMLGAYTHNGMDDEAMKFFVRMMQESGVHPDMYSFTSIISSCSE 308
Query: 244 VG-NLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGD---LELARRVFDAVLEKSVFL 299
G + +H L++KS P+ N L++MYT+ + +E A + F++++ K
Sbjct: 309 HGHDDHQGRVIHGLVIKSALEGVTPVCNALIAMYTRYNENCMMEDAYKCFNSLVLKDTVS 368
Query: 300 WTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIV 359
W SM+ GY+Q G ++A+ F+ + +VR +E + L + +EL L GK+I ++
Sbjct: 369 WNSMLTGYSQHGLSADALKFFRCMCSENVRTDEYAFSAALRSSSELAVLQLGKQIHGLVI 428
Query: 360 LNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALN 419
+G SN V +SLI M+SK G I+ A++ FE W+AMI GYA HG +
Sbjct: 429 HSGFASNDFVSSSLIFMYSKSGIIDDARKSFEEADKSSSVPWNAMIFGYAQHGQAENVDI 488
Query: 420 LFYKMQHVEGLKP-DAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVD 478
LF +M ++ P D + + ++++CSH+G+VD+G +M++ +G+ +EHY C VD
Sbjct: 489 LFNEM--LQRKAPLDHITFVGLITSCSHAGLVDEGSEILNTMETKYGVPLRMEHYACGVD 546
Query: 479 LLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGN 538
L GRAG+ D A K I MP E A VW LL AC H NVEL A +L P
Sbjct: 547 LYGRAGQLDKAKKLIDSMPFEPDAMVWMTLLGACRIHGNVELASDVASHLFVAEPRQHST 606
Query: 539 YILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDI 598
Y+L++++++ GMW + AT + +M R L+K PGWS +E+ V F A D+SH +I
Sbjct: 607 YVLLSSMYSGLGMWSDRATVQRVMKKRGLSKVPGWSWIEVKNEVHSFNAEDKSHPKMDEI 666
Query: 599 RKTLKEL 605
+ L+ L
Sbjct: 667 YEMLRVL 673
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 84/286 (29%), Positives = 142/286 (49%), Gaps = 4/286 (1%)
Query: 169 NSVMSMYAKFGK--VNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMS 226
N +++ Y++ + AR +FDE+ VSW ++ G EA+ L M
Sbjct: 29 NQLLTAYSRSSPDGLAAARRVFDEVPRRDEVSWNALLAAQAASGAHPEAWRLLRAMHAQG 88
Query: 227 VTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELAR 286
+ + + + A + + SL LKSG N + L+ +Y KCG + AR
Sbjct: 89 LASNTFALGSALRSAAVARRPAIGAQLQSLALKSGLANNVFAASALLDVYAKCGRVRDAR 148
Query: 287 RVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELG 346
+VFD + E++ W ++I GY + G + A+ LF + + + P+EAT A+ L+A E
Sbjct: 149 QVFDGMPERNTVSWNALIAGYTESGDMASALELFLEMEREGLAPDEATFASLLTA-VEGP 207
Query: 347 SLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPD-KDLAVWSAMI 405
S ++ IV G V + I +S+CG + ++ +F+ + D +DL W+AM+
Sbjct: 208 SCFLMHQLHGKIVKYGSALGLTVLNAAITAYSQCGSLKDSRRIFDGIGDIRDLISWNAML 267
Query: 406 NGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVD 451
Y +GM D+A+ F +M G+ PD +TSI+S+CS G D
Sbjct: 268 GAYTHNGMDDEAMKFFVRMMQESGVHPDMYSFTSIISSCSEHGHDD 313
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 97/220 (44%), Gaps = 7/220 (3%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
M+ + +G + L + M V + + F L++ + + + GK++H V+ G
Sbjct: 372 MLTGYSQHGLSADALKFFRCMCSENVRTDEYAFSAALRSSSELAVLQLGKQIHGLVIHSG 431
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F + FV + LI MYSK +RK +E S V WN++I +++ + ++
Sbjct: 432 FASNDFVSSSLIFMYSKSGIIDDARKSFEE--ADKSSSVPWNAMIFGYAQHGQAENVDIL 489
Query: 121 LKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGLLNNEIPLA----NSVMSMYA 176
EM L TFV +++ CS + + +PL + +Y
Sbjct: 490 FNEMLQRKAPLDHITFVGLITSCSHAGLVDEGSEILNTMETKYGVPLRMEHYACGVDLYG 549
Query: 177 KFGKVNEARSIFDEIG-ETSIVSWTTIIGGYVNVGNVNEA 215
+ G++++A+ + D + E + W T++G GNV A
Sbjct: 550 RAGQLDKAKKLIDSMPFEPDAMVWMTLLGACRIHGNVELA 589
>gi|357134267|ref|XP_003568739.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like [Brachypodium distachyon]
Length = 818
Score = 336 bits (862), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 204/624 (32%), Positives = 337/624 (54%), Gaps = 20/624 (3%)
Query: 8 NGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSI-WDGKRVHSHVLKVGF-QQDA 65
NG+ E+L ML+ G+ N+FT +AC G V VLK GF D
Sbjct: 121 NGAERESLRLLGEMLELGLRPNAFTLCAAARACFPQELFRLAGGVVLGFVLKTGFWGTDV 180
Query: 66 FVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMW 125
V LIDM+++ D V++++V D + R + V W +I+ + +A + + + M
Sbjct: 181 SVGCALIDMFARNGDLVAAQRVFDGLIER--TSVVWTLLITRYVQAGCASKVVELFLHML 238
Query: 126 VLGLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFG-- 179
G E + S++S C S R G +H +LGL+++ ++ ++ MYAK
Sbjct: 239 DDGFEPDGYSMSSMISACTELGSVRLGQQLHSVALRLGLVSDSC-VSCGLVDMYAKLKME 297
Query: 180 -KVNEARSIFDEIGETSIVSWTTIIGGYVNVG-NVNEAFGLCNQMRRMSVTPDLVVFLNL 237
+ AR +F + +++SWT +I GYV G N L +M S+ P+ + + NL
Sbjct: 298 RSMEHARKVFKTMPRHNVMSWTALISGYVQSGVQENNVMALFREMLNESIRPNHITYSNL 357
Query: 238 ILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSV 297
+ CA + + +H+ +LK+ + + + N LVSMY + G +E AR+ FD + E ++
Sbjct: 358 LKACANLSDQDSGRQIHAHVLKTSIAHVNVVGNALVSMYAESGCMEEARKAFDQLYETNI 417
Query: 298 FLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEY 357
+ + S + + T T A+ LSA A +G L+KG+++
Sbjct: 418 LSMSPDVETERNNASCSSKIEGMDDGVST------FTFASLLSAAASVGLLTKGQKLHAL 471
Query: 358 IVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQA 417
+ G S++ + SL+ M+++CG + A F+ + D ++ W+++I+G A HG QA
Sbjct: 472 SMKAGFRSDQGISNSLVSMYARCGYLEDACRAFDEMKDHNVISWTSIISGLAKHGYAKQA 531
Query: 418 LNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLV 477
L++F+ M + G+KP+ V Y ++LSACSH G+V +G F+SMQ + G+ P +EHY C+V
Sbjct: 532 LSMFHDMI-LAGVKPNDVTYIAVLSACSHVGLVKEGKEHFRSMQKDHGLLPRMEHYACIV 590
Query: 478 DLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTG 537
DLL R+G + A + I+EMP + A VW LLSAC + N E+GE AA +++ L P
Sbjct: 591 DLLARSGLVEEARQFINEMPCKADALVWKTLLSACRTYGNTEIGEIAANHVINLEPRDPA 650
Query: 538 NYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVD 597
Y+L++NL+ AG+W E A R LM D+ L+KE G S +++ ++ F AGD SH L++D
Sbjct: 651 PYVLLSNLYADAGLWDEVARIRSLMRDKNLSKETGLSWMDVGNTIHEFRAGDTSHPLAID 710
Query: 598 IRKTLKELHIKLLEAGYIAEADIV 621
I L L ++ + GY+ + IV
Sbjct: 711 IYAKLVTLIREIKDIGYVPDTSIV 734
Score = 179 bits (454), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 125/466 (26%), Positives = 238/466 (51%), Gaps = 29/466 (6%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+I G + + + ML G + ++ ++ AC + S+ G+++HS L++G
Sbjct: 217 LITRYVQAGCASKVVELFLHMLDDGFEPDGYSMSSMISACTELGSVRLGQQLHSVALRLG 276
Query: 61 FQQDAFVQTGLIDMYSKCS---DFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEA 117
D+ V GL+DMY+K +RKV MP +V+SW ++IS + ++ + +
Sbjct: 277 LVSDSCVSCGLVDMYAKLKMERSMEHARKVFKTMP--RHNVMSWTALISGYVQSGVQENN 334
Query: 118 ILVL-KEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVM 172
++ L +EM + + T+ +++ C+ G +H V K + + + + N+++
Sbjct: 335 VMALFREMLNESIRPNHITYSNLLKACANLSDQDSGRQIHAHVLKTSIAHVNV-VGNALV 393
Query: 173 SMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLV 232
SMYA+ G + EAR FD++ ET+I+S + + N + + +++ M
Sbjct: 394 SMYAESGCMEEARKAFDQLYETNILSMSPDVETERNNASCS------SKIEGMDDGVSTF 447
Query: 233 VFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAV 292
F +L+ A VG L +H+L +K+G+ ++ + N LVSMY +CG LE A R FD +
Sbjct: 448 TFASLLSAAASVGLLTKGQKLHALSMKAGFRSDQGISNSLVSMYARCGYLEDACRAFDEM 507
Query: 293 LEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGK 352
+ +V WTS+I G A+ GY +A+++F ++ V+PN+ T LSAC+ +G + +GK
Sbjct: 508 KDHNVISWTSIISGLAKHGYAKQALSMFHDMILAGVKPNDVTYIAVLSACSHVGLVKEGK 567
Query: 353 E-IEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDK-DLAVWSAMINGYAI 410
E +GL + ++ + ++ G + +A++ +P K D VW +++
Sbjct: 568 EHFRSMQKDHGLLPRMEHYACIVDLLARSGLVEEARQFINEMPCKADALVWKTLLSACRT 627
Query: 411 HG---MGDQALNLFYKMQHVEGLKP-DAVVYTSILSACSHSGMVDD 452
+G +G+ A N HV L+P D Y + + + +G+ D+
Sbjct: 628 YGNTEIGEIAAN------HVINLEPRDPAPYVLLSNLYADAGLWDE 667
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 132/493 (26%), Positives = 233/493 (47%), Gaps = 26/493 (5%)
Query: 36 VLKACANINSIWDGKRVHSHVLKVG-FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVR 94
+L + A + G+ +H +L+ DA V L+ MYSKC ++R+V D+M
Sbjct: 46 LLTSAARAGDLRLGRALHRRLLRSEILDTDAVVANSLLTMYSKCGAVEAARRVFDQM-CG 104
Query: 95 LRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCS----FR-QGI 149
+R +VSW ++ S +R E++ +L EM LGL +A T + C FR G
Sbjct: 105 VRDLVSWTAMASCLARNGAERESLRLLGEMLELGLRPNAFTLCAAARACFPQELFRLAGG 164
Query: 150 SMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNV 209
+ V K G ++ + +++ M+A+ G + A+ +FD + E + V WT +I YV
Sbjct: 165 VVLGFVLKTGFWGTDVSVGCALIDMFARNGDLVAAQRVFDGLIERTSVVWTLLITRYVQA 224
Query: 210 GNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLD 269
G ++ L M PD ++I C ++G++ L +HS+ L+ G ++ +
Sbjct: 225 GCASKVVELFLHMLDDGFEPDGYSMSSMISACTELGSVRLGQQLHSVALRLGLVSDSCVS 284
Query: 270 NLLVSMYTKCG---DLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAV-NLFKRLLK 325
LV MY K +E AR+VF + +V WT++I GY Q G V LF+ +L
Sbjct: 285 CGLVDMYAKLKMERSMEHARKVFKTMPRHNVMSWTALISGYVQSGVQENNVMALFREMLN 344
Query: 326 TSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINK 385
S+RPN T + L ACA L G++I +++ + V +L+ M+++ G + +
Sbjct: 345 ESIRPNHITYSNLLKACANLSDQDSGRQIHAHVLKTSIAHVNVVGNALVSMYAESGCMEE 404
Query: 386 AKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYT--SILSA 443
A++ F+++ + ++ S + + N +EG+ +T S+LSA
Sbjct: 405 ARKAFDQLYETNILSMSPDV---------ETERNNASCSSKIEGMDDGVSTFTFASLLSA 455
Query: 444 CSHSGMVDDGLSFFK-SMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQA 502
+ G++ G SM++ F + I + LV + R G + A + EM +
Sbjct: 456 AASVGLLTKGQKLHALSMKAGFRSDQGISN--SLVSMYARCGYLEDACRAFDEMK-DHNV 512
Query: 503 QVWAPLLSACMKH 515
W ++S KH
Sbjct: 513 ISWTSIISGLAKH 525
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 91/328 (27%), Positives = 170/328 (51%), Gaps = 6/328 (1%)
Query: 132 SASTFVSVVSGCSFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEI 191
+A S R G ++H + + +L+ + +ANS+++MY+K G V AR +FD++
Sbjct: 43 AAKLLTSAARAGDLRLGRALHRRLLRSEILDTDAVVANSLLTMYSKCGAVEAARRVFDQM 102
Query: 192 -GETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLA 250
G +VSWT + G E+ L +M + + P+ C LA
Sbjct: 103 CGVRDLVSWTAMASCLARNGAERESLRLLGEMLELGLRPNAFTLCAAARACFPQELFRLA 162
Query: 251 LS-MHSLLLKSGYNNED-PLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYA 308
+ +LK+G+ D + L+ M+ + GDL A+RVFD ++E++ +WT +I Y
Sbjct: 163 GGVVLGFVLKTGFWGTDVSVGCALIDMFARNGDLVAAQRVFDGLIERTSVVWTLLITRYV 222
Query: 309 QLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQ 368
Q G S+ V LF +L P+ ++++ +SAC ELGS+ G+++ + GL S+
Sbjct: 223 QAGCASKVVELFLHMLDDGFEPDGYSMSSMISACTELGSVRLGQQLHSVALRLGLVSDSC 282
Query: 369 VQTSLIHMFSKCG---RINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQ 425
V L+ M++K + A++VF+ +P ++ W+A+I+GY G+ + + ++
Sbjct: 283 VSCGLVDMYAKLKMERSMEHARKVFKTMPRHNVMSWTALISGYVQSGVQENNVMALFREM 342
Query: 426 HVEGLKPDAVVYTSILSACSHSGMVDDG 453
E ++P+ + Y+++L AC++ D G
Sbjct: 343 LNESIRPNHITYSNLLKACANLSDQDSG 370
>gi|356532944|ref|XP_003535029.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21300-like [Glycine max]
Length = 813
Score = 336 bits (862), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 200/621 (32%), Positives = 329/621 (52%), Gaps = 8/621 (1%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
M+R +G F+ + T+ M + NS T+ +L CA + G ++H V+ G
Sbjct: 184 MLRGYVKSGDFDNAIGTFCEMRTSYSMVNSVTYTCILSICATRGNFCAGTQLHGLVIGSG 243
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F+ D V L+ MYSKC + + +RK+ + MP V+WN +I+ + + DEA +
Sbjct: 244 FEFDPQVANTLVAMYSKCGNLLYARKLFNTMP--QTDTVTWNGLIAGYVQNGFTDEAAPL 301
Query: 121 LKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGLLNNEIP----LANSVMSMYA 176
M G++ + TF S + G HC ++ + +P L ++++ +Y
Sbjct: 302 FNAMISAGVKPDSVTFASFLPSI-LESGSLRHCKEVHSYIVRHRVPFDVYLKSALIDVYF 360
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K G V AR IF + + T +I GYV G +A + + + + + +
Sbjct: 361 KGGDVEMARKIFQQNILVDVAVCTAMISGYVLHGLNIDAINTFRWLIQEGMVTNSLTMAS 420
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
++ CA V L +H +LK N + + + MY KCG L+LA F + ++
Sbjct: 421 VLPACAAVAALKPGKELHCHILKKRLENIVNVGSAITDMYAKCGRLDLAYEFFRRMSDRD 480
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEE 356
W SMI ++Q G P A++LF+++ + + + +L++ LSA A L +L GKE+
Sbjct: 481 SVCWNSMISSFSQNGKPEIAIDLFRQMGMSGAKFDSVSLSSALSAAANLPALYYGKEMHG 540
Query: 357 YIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQ 416
Y++ N S+ V ++LI M+SKCG + A VF + K+ W+++I Y HG +
Sbjct: 541 YVIRNAFSSDTFVASTLIDMYSKCGNLALAWCVFNLMDGKNEVSWNSIIAAYGNHGCPRE 600
Query: 417 ALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCL 476
L+L+++M G+ PD V + I+SAC H+G+VD+G+ +F M +GI +EHY C+
Sbjct: 601 CLDLYHEMLRA-GIHPDHVTFLVIISACGHAGLVDEGIHYFHCMTREYGIGARMEHYACM 659
Query: 477 VDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGST 536
VDL GRAGR A TI MP A VW LL AC H NVEL + A+++LL L+P ++
Sbjct: 660 VDLYGRAGRVHEAFDTIKSMPFTPDAGVWGTLLGACRLHGNVELAKLASRHLLELDPKNS 719
Query: 537 GNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSV 596
G Y+L++N+ AG W R LM ++ + K PG+S ++++G +F A D +H SV
Sbjct: 720 GYYVLLSNVHADAGEWASVLKVRSLMKEKGVQKIPGYSWIDVNGGTHMFSAADGNHPESV 779
Query: 597 DIRKTLKELHIKLLEAGYIAE 617
+I LK L ++L + GY+ +
Sbjct: 780 EIYLILKSLLLELRKQGYVPQ 800
Score = 228 bits (580), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 139/439 (31%), Positives = 237/439 (53%), Gaps = 8/439 (1%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MIR G F+ L Y ML + V + +TFP V+KAC +N++ VH +G
Sbjct: 83 MIRGLYMLGWFDFALLFYFKMLGSNVSPDKYTFPYVIKACGGLNNVPLCMVVHDTARSLG 142
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F D F + LI +Y+ +R+V DE+P LR + WN ++ + ++ D AI
Sbjct: 143 FHVDLFAGSALIKLYADNGYIRDARRVFDELP--LRDTILWNVMLRGYVKSGDFDNAIGT 200
Query: 121 LKEMWVLGLELSASTFVSVVSGCSFR----QGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
EM +++ T+ ++S C+ R G +H V G + +AN++++MY+
Sbjct: 201 FCEMRTSYSMVNSVTYTCILSICATRGNFCAGTQLHGLVIGSG-FEFDPQVANTLVAMYS 259
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K G + AR +F+ + +T V+W +I GYV G +EA L N M V PD V F +
Sbjct: 260 KCGNLLYARKLFNTMPQTDTVTWNGLIAGYVQNGFTDEAAPLFNAMISAGVKPDSVTFAS 319
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
+ + G+L +HS +++ + L + L+ +Y K GD+E+AR++F +
Sbjct: 320 FLPSILESGSLRHCKEVHSYIVRHRVPFDVYLKSALIDVYFKGGDVEMARKIFQQNILVD 379
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEE 356
V + T+MI GY G +A+N F+ L++ + N T+A+ L ACA + +L GKE+
Sbjct: 380 VAVCTAMISGYVLHGLNIDAINTFRWLIQEGMVTNSLTMASVLPACAAVAALKPGKELHC 439
Query: 357 YIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQ 416
+I+ LE+ V +++ M++KCGR++ A E F R+ D+D W++MI+ ++ +G +
Sbjct: 440 HILKKRLENIVNVGSAITDMYAKCGRLDLAYEFFRRMSDRDSVCWNSMISSFSQNGKPEI 499
Query: 417 ALNLFYKMQHVEGLKPDAV 435
A++LF +M + G K D+V
Sbjct: 500 AIDLFRQMG-MSGAKFDSV 517
Score = 197 bits (502), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 130/516 (25%), Positives = 253/516 (49%), Gaps = 29/516 (5%)
Query: 13 ETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLI 72
ETL + ++ L++ + +AC++ + + ++VH+ V+ G + ++
Sbjct: 5 ETLDSLTTQLES-----------LFRACSDASMVQQARQVHTQVIVGGMGDVCAPSSRVL 53
Query: 73 DMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELS 132
+Y C F + + E+ LR + WN +I D A+L +M +
Sbjct: 54 GLYVLCGRFRDAGNLFFEL--ELRYALPWNWMIRGLYMLGWFDFALLFYFKMLGSNVSPD 111
Query: 133 ASTFVSVVSGCSFRQGISM----HCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIF 188
TF V+ C + + H LG + ++ ++++ +YA G + +AR +F
Sbjct: 112 KYTFPYVIKACGGLNNVPLCMVVHDTARSLGF-HVDLFAGSALIKLYADNGYIRDARRVF 170
Query: 189 DEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLF 248
DE+ + W ++ GYV G+ + A G +MR + V + ++ CA GN
Sbjct: 171 DELPLRDTILWNVMLRGYVKSGDFDNAIGTFCEMRTSYSMVNSVTYTCILSICATRGNFC 230
Query: 249 LALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYA 308
+H L++ SG+ + + N LV+MY+KCG+L AR++F+ + + W +I GY
Sbjct: 231 AGTQLHGLVIGSGFEFDPQVANTLVAMYSKCGNLLYARKLFNTMPQTDTVTWNGLIAGYV 290
Query: 309 QLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQ 368
Q G+ EA LF ++ V+P+ T A+ L + E GSL KE+ YIV + + +
Sbjct: 291 QNGFTDEAAPLFNAMISAGVKPDSVTFASFLPSILESGSLRHCKEVHSYIVRHRVPFDVY 350
Query: 369 VQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVE 428
++++LI ++ K G + A+++F++ D+AV +AMI+GY +HG+ A+N F + E
Sbjct: 351 LKSALIDVYFKGGDVEMARKIFQQNILVDVAVCTAMISGYVLHGLNIDAINTFRWLIQ-E 409
Query: 429 GLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYL----CLVDLLGRAG 484
G+ +++ S+L AC+ + G K + + ++ +E+ + + D+ + G
Sbjct: 410 GMVTNSLTMASVLPACAAVAALKPG----KELHCHI-LKKRLENIVNVGSAITDMYAKCG 464
Query: 485 RFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVEL 520
R DLA + M + + W ++S+ ++ E+
Sbjct: 465 RLDLAYEFFRRMS-DRDSVCWNSMISSFSQNGKPEI 499
>gi|357481301|ref|XP_003610936.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512271|gb|AES93894.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 812
Score = 336 bits (862), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 195/640 (30%), Positives = 335/640 (52%), Gaps = 49/640 (7%)
Query: 27 HGNSFTF---PL--VLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDF 81
H +SF P+ +L C N+ S+ GK++H+H++ +G Q+ + + LI+ Y+ D
Sbjct: 84 HASSFDIIFQPIKHLLLGCTNLKSLSQGKQIHAHIISLGIHQNPILVSKLINFYASV-DL 142
Query: 82 VSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVS 141
++ +++ E + WN +IS + + CL ++AI V + M G+ T+ SV+
Sbjct: 143 LADAQIVAECSNSFDPL-HWNMVISLYVKNCLFEDAISVYRRMLSKGVIPDDYTYPSVLK 201
Query: 142 GC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIV 197
C + G+++H + + + + + N+++ MY +FGK+ AR +FD + V
Sbjct: 202 ACGELLDYDSGVAVHKAIQESSI-KWSLFVHNALVFMYGRFGKLEVARELFDIMPARDDV 260
Query: 198 SWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSM---- 253
SW T+I Y + G +EAF L MR + +++++ + GC GN AL +
Sbjct: 261 SWNTMISCYASRGLWDEAFRLFGCMREAGIERNIIIWNTIAGGCLHTGNFKGALKLFSQM 320
Query: 254 ------------------------------HSLLLKSGYNNEDPLDNLLVSMYTKCGDLE 283
H +++ ++ D + N L++MY++C DL
Sbjct: 321 RAVIQLDSVAMVVGLNACSHIGAVKLGKEIHGHAVRTCFDVFDNVKNTLITMYSRCRDLN 380
Query: 284 LARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACA 343
A +F + EK + W +M+ G+A + E L + +L+ V PN T+A+ L CA
Sbjct: 381 HAYLLFRKIDEKGLITWNAMLSGFAHMDRSEEVSFLLREMLREGVEPNYVTIASILPLCA 440
Query: 344 ELGSLSKGKEIEEYIVLN--GLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVW 401
+ +L GKE Y+V + + SL+ M+S+ G++ +A++VF+ + KD +
Sbjct: 441 RIANLQHGKEFHCYMVKREEQFKGYLLLWNSLVEMYSRSGKVLEARKVFDSLSRKDEVTY 500
Query: 402 SAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQ 461
++MI GY + G G+ AL LF +M+ + +KPD V ++L ACSHSG+V G F+ M
Sbjct: 501 TSMIMGYGVSGDGETALKLFAEMRRL-NIKPDHVTMVAVLIACSHSGLVAQGQVLFRKMI 559
Query: 462 SNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELG 521
+GI+P +EHY C+VDL GRAG D A + I M + + +WA L+ AC H N +G
Sbjct: 560 EVYGIDPRVEHYSCMVDLFGRAGLLDKAKEVITGMSCKPTSAIWATLIGACKIHGNTVIG 619
Query: 522 EYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGS 581
E+AA LL + P +G Y+L+AN++ +A + A AR M D + PG + V++
Sbjct: 620 EWAAGKLLEMKPDHSGYYLLIANMYAAANRLDKEAEARTYMRDSGAKRTPGCAWVDVGRE 679
Query: 582 VQVFVAGDRSHHLSVDIRKTLKELHIKLLEAGYIAEADIV 621
+ F+AGD S+ S +I +K L+I + +AGY +V
Sbjct: 680 LCPFLAGDTSNPRSCEISPMMKRLNILMKDAGYAPSEGVV 719
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 127/476 (26%), Positives = 221/476 (46%), Gaps = 52/476 (10%)
Query: 6 TNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDA 65
N FE+ +S Y ML GV + +T+P VLKAC + G VH + + +
Sbjct: 169 VKNCLFEDAISVYRRMLSKGVIPDDYTYPSVLKACGELLDYDSGVAVHKAIQESSIKWSL 228
Query: 66 FVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMW 125
FV L+ MY + +R++ D MP R VSWN++IS ++ L DEA + M
Sbjct: 229 FVHNALVFMYGRFGKLEVARELFDIMPA--RDDVSWNTMISCYASRGLWDEAFRLFGCMR 286
Query: 126 VLGLELSASTFVSVVSGC--------------SFRQGISMHCCVYKLGL----------L 161
G+E + + ++ GC R I + +GL L
Sbjct: 287 EAGIERNIIIWNTIAGGCLHTGNFKGALKLFSQMRAVIQLDSVAMVVGLNACSHIGAVKL 346
Query: 162 NNEIP-------------LANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVN 208
EI + N++++MY++ +N A +F +I E +++W ++ G+ +
Sbjct: 347 GKEIHGHAVRTCFDVFDNVKNTLITMYSRCRDLNHAYLLFRKIDEKGLITWNAMLSGFAH 406
Query: 209 VGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLK--SGYNNED 266
+ E L +M R V P+ V +++ CA++ NL H ++K +
Sbjct: 407 MDRSEEVSFLLREMLREGVEPNYVTIASILPLCARIANLQHGKEFHCYMVKREEQFKGYL 466
Query: 267 PLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKT 326
L N LV MY++ G + AR+VFD++ K +TSMI GY G A+ LF + +
Sbjct: 467 LLWNSLVEMYSRSGKVLEARKVFDSLSRKDEVTYTSMIMGYGVSGDGETALKLFAEMRRL 526
Query: 327 SVRPNEATLATTLSACAELGSLSKGKEI-EEYIVLNGLESNRQVQTSLIHMFSKCGRINK 385
+++P+ T+ L AC+ G +++G+ + + I + G++ + + ++ +F + G ++K
Sbjct: 527 NIKPDHVTMVAVLIACSHSGLVAQGQVLFRKMIEVYGIDPRVEHYSCMVDLFGRAGLLDK 586
Query: 386 AKEVFERVPDKDL-AVWSAMINGYAIHG---MGDQALNLFYKMQHVEGLKPDAVVY 437
AKEV + K A+W+ +I IHG +G+ A +M KPD Y
Sbjct: 587 AKEVITGMSCKPTSAIWATLIGACKIHGNTVIGEWAAGKLLEM------KPDHSGY 636
>gi|449486805|ref|XP_004157408.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g33170-like [Cucumis sativus]
Length = 1573
Score = 336 bits (862), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 188/621 (30%), Positives = 326/621 (52%), Gaps = 12/621 (1%)
Query: 9 GSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQ 68
G + + ++L++ + +S T ++L A + + G+++H+ V+K F V
Sbjct: 873 GQIVAAIDCFKTLLRSTIGHDSVTLVIILSAAVGADDLDLGEQIHALVIKSSFAPVVPVS 932
Query: 69 TGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLG 128
L++MYSK ++ K P ++SWN++IS++++ L EAI +++ G
Sbjct: 933 NSLMNMYSKAGVVYAAEKTFINSPEL--DLISWNTMISSYAQNNLEMEAICTFRDLLRDG 990
Query: 129 LELSASTFVSVVSGCS-------FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKV 181
L+ T SV+ CS F G +H K G++N+ ++ +++ +Y+K GK+
Sbjct: 991 LKPDQFTLASVLRACSTGDEGEYFTLGSQVHVYAIKCGIINDSF-VSTALIDLYSKGGKM 1049
Query: 182 NEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGC 241
+EA + + + SW I+ GY+ +A + M M + D + I
Sbjct: 1050 DEAEFLLHGKYDFDLASWNAIMFGYIKSNKSRKALEHFSLMHEMGIPIDEITLATAIKAS 1109
Query: 242 AQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWT 301
+ NL + + +K G+NN+ + + ++ MY KCGD+ A +F + WT
Sbjct: 1110 GCLINLKQGKQIQAYAIKLGFNNDLWVSSGVLDMYIKCGDMPNALELFGEISRPDEVAWT 1169
Query: 302 SMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLN 361
+MI GY + G A++++ + + V+P+E T AT + A + L +L +GK+I +V
Sbjct: 1170 TMISGYIENGDEDHALSVYHLMRVSGVQPDEYTFATLIKASSCLTALEQGKQIHANVVKL 1229
Query: 362 GLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLF 421
+ V TSL+ M+ KCG + A VF ++ + + W+AM+ G A HG D+ALNLF
Sbjct: 1230 DYSLDHFVGTSLVDMYCKCGSVQDAYRVFRKMDVRKVVFWNAMLLGLAQHGHVDEALNLF 1289
Query: 422 YKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLG 481
MQ G++PD V + +LSACSHSG+ + +F +M +GI P IEHY CLVD LG
Sbjct: 1290 RTMQS-NGIQPDKVTFIGVLSACSHSGLFSEAYKYFDAMFKTYGITPEIEHYSCLVDALG 1348
Query: 482 RAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYIL 541
RAGR A I MP + A ++ LL AC + E + A LL L+P + Y+L
Sbjct: 1349 RAGRIQEAENVIASMPFKASASMYRALLGACRTKGDAETAKRVADKLLALDPSDSSAYVL 1408
Query: 542 MANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKT 601
++N++ ++ W + AR +M + + K+PG+S +++ V +FV DRSH + I +
Sbjct: 1409 LSNIYAASRQWDDVTDARNMMKLKNVKKDPGFSWIDVKNKVHLFVVDDRSHPQASLIYEK 1468
Query: 602 LKELHIKLLEAG-YIAEADIV 621
+++L ++ E G Y+ + D
Sbjct: 1469 IEDLMKRIREEGSYVPDTDFT 1489
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 130/459 (28%), Positives = 222/459 (48%), Gaps = 22/459 (4%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINS---IWDGKRVHSHVL 57
MI + N E + T+ +L+ G+ + FT VL+AC+ + G +VH + +
Sbjct: 966 MISSYAQNNLEMEAICTFRDLLRDGLKPDQFTLASVLRACSTGDEGEYFTLGSQVHVYAI 1025
Query: 58 KVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLR-----SVVSWNSIISAHSRAC 112
K G D+FV T LID+YSK +DE L + SWN+I+ + ++
Sbjct: 1026 KCGIINDSFVSTALIDLYSKGGK-------MDEAEFLLHGKYDFDLASWNAIMFGYIKSN 1078
Query: 113 LNDEAILVLKEMWVLGLELSASTFVSVV--SGC--SFRQGISMHCCVYKLGLLNNEIPLA 168
+ +A+ M +G+ + T + + SGC + +QG + KLG NN++ ++
Sbjct: 1079 KSRKALEHFSLMHEMGIPIDEITLATAIKASGCLINLKQGKQIQAYAIKLG-FNNDLWVS 1137
Query: 169 NSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVT 228
+ V+ MY K G + A +F EI V+WTT+I GY+ G+ + A + + MR V
Sbjct: 1138 SGVLDMYIKCGDMPNALELFGEISRPDEVAWTTMISGYIENGDEDHALSVYHLMRVSGVQ 1197
Query: 229 PDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRV 288
PD F LI + + L +H+ ++K Y+ + + LV MY KCG ++ A RV
Sbjct: 1198 PDEYTFATLIKASSCLTALEQGKQIHANVVKLDYSLDHFVGTSLVDMYCKCGSVQDAYRV 1257
Query: 289 FDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSL 348
F + + V W +M+ G AQ G+ EA+NLF+ + ++P++ T LSAC+ G
Sbjct: 1258 FRKMDVRKVVFWNAMLLGLAQHGHVDEALNLFRTMQSNGIQPDKVTFIGVLSACSHSGLF 1317
Query: 349 SKG-KEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLA-VWSAMIN 406
S+ K + G+ + + L+ + GRI +A+ V +P K A ++ A++
Sbjct: 1318 SEAYKYFDAMFKTYGITPEIEHYSCLVDALGRAGRIQEAENVIASMPFKASASMYRALLG 1377
Query: 407 GYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACS 445
G + A + K+ ++ A V S + A S
Sbjct: 1378 ACRTKGDAETAKRVADKLLALDPSDSSAYVLLSNIYAAS 1416
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 103/398 (25%), Positives = 185/398 (46%), Gaps = 34/398 (8%)
Query: 52 VHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRA 111
VH + +K+GF+ D FV L+++Y K +R + D+MP R V WN ++ A+
Sbjct: 739 VHGYAVKIGFELDLFVSGALVNIYCKYGLVGQARLLFDKMPER--DAVLWNVMLKAYVEN 796
Query: 112 CLNDEAILVLKEMWVLGLELSASTFVSVVSGCSFRQGIS-MHCCVYKLG--LLNNEIPLA 168
DEA+ F S F S +HC + + + NN A
Sbjct: 797 SFQDEAL----------------RFFSAFHRSGFXPDFSNLHCVIGGVNSDVSNNRKRHA 840
Query: 169 NSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVT 228
V + K ++ +IF +W + +++ G + A + R ++
Sbjct: 841 EQVKAYAMKMFPFDQGSNIF---------AWNKKLTEFLHAGQIVAAIDCFKTLLRSTIG 891
Query: 229 PDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRV 288
D V + ++ +L L +H+L++KS + P+ N L++MY+K G + A +
Sbjct: 892 HDSVTLVIILSAAVGADDLDLGEQIHALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEKT 951
Query: 289 FDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACA---EL 345
F E + W +MI YAQ EA+ F+ LL+ ++P++ TLA+ L AC+ E
Sbjct: 952 FINSPELDLISWNTMISSYAQNNLEMEAICTFRDLLRDGLKPDQFTLASVLRACSTGDEG 1011
Query: 346 GSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMI 405
+ G ++ Y + G+ ++ V T+LI ++SK G++++A+ + D DLA W+A++
Sbjct: 1012 EYFTLGSQVHVYAIKCGIINDSFVSTALIDLYSKGGKMDEAEFLLHGKYDFDLASWNAIM 1071
Query: 406 NGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSA 443
GY +AL F + H G+ D + + + A
Sbjct: 1072 FGYIKSNKSRKALEHF-SLMHEMGIPIDEITLATAIKA 1108
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 122/460 (26%), Positives = 213/460 (46%), Gaps = 46/460 (10%)
Query: 49 GKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAH 108
GKR H+ ++ G D ++ LI MYSKC S+R+V D+ R +V+WNSI++A+
Sbjct: 630 GKRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSD--RDLVTWNSILAAY 687
Query: 109 SR-ACLNDEAIL-------VLKEMWVLGLELSASTFVSVVSGCSFRQ-GISMHCCVYKLG 159
++ A + E +L +L+E L+ + + + F Q ++H K+G
Sbjct: 688 AQFADSSYENVLEGFRLFGLLREFGFSITRLTLAPLLKLCLLSGFVQVSETVHGYAVKIG 747
Query: 160 LLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLC 219
++ ++ +++++Y K+G V +AR +FD++ E V W ++ YV +EA
Sbjct: 748 -FELDLFVSGALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKAYVENSFQDEALRFF 806
Query: 220 NQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKC 279
+ R PD F N L C G + S +N V Y
Sbjct: 807 SAFHRSGFXPD---FSN--LHCVIGG------------VNSDVSNNRKRHAEQVKAY--- 846
Query: 280 GDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTL 339
A ++F ++F W + + G A++ FK LL++++ + TL L
Sbjct: 847 -----AMKMFPFDQGSNIFAWNKKLTEFLHAGQIVAAIDCFKTLLRSTIGHDSVTLVIIL 901
Query: 340 SACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLA 399
SA L G++I ++ + V SL++M+SK G + A++ F P+ DL
Sbjct: 902 SAAVGADDLDLGEQIHALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEKTFINSPELDLI 961
Query: 400 VWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKS 459
W+ MI+ YA + + +A+ F + +GLKPD S+L ACS D+G F
Sbjct: 962 SWNTMISSYAQNNLEMEAICTFRDLLR-DGLKPDQFTLASVLRACSTG---DEGEYFTLG 1017
Query: 460 MQSN-FGIEPSI--EHYL--CLVDLLGRAGRFDLALKTIH 494
Q + + I+ I + ++ L+DL + G+ D A +H
Sbjct: 1018 SQVHVYAIKCGIINDSFVSTALIDLYSKGGKMDEAEFLLH 1057
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 98/195 (50%), Gaps = 6/195 (3%)
Query: 244 VGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSM 303
+ +L L H+ ++ SG + L N L++MY+KCG L AR+VFD ++ + W S+
Sbjct: 624 MADLKLGKRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLVTWNSI 683
Query: 304 IGGYAQLGYPS-----EAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYI 358
+ YAQ S E LF L + TLA L C G + + + Y
Sbjct: 684 LAAYAQFADSSYENVLEGFRLFGLLREFGFSITRLTLAPLLKLCLLSGFVQVSETVHGYA 743
Query: 359 VLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQAL 418
V G E + V +L++++ K G + +A+ +F+++P++D +W+ M+ Y + D+AL
Sbjct: 744 VKIGFELDLFVSGALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKAYVENSFQDEAL 803
Query: 419 NLFYKMQHVEGLKPD 433
F+ H G PD
Sbjct: 804 R-FFSAFHRSGFXPD 817
>gi|297744484|emb|CBI37746.3| unnamed protein product [Vitis vinifera]
Length = 2090
Score = 336 bits (862), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 195/612 (31%), Positives = 333/612 (54%), Gaps = 10/612 (1%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI + G+ ++ L + N T L + AC ++ ++ +G ++H ++++ G
Sbjct: 107 MIHGHLSRGASDKGLWWFRQARVIAFEPNVSTLVLAIHACRSLGAMEEGLKMHGYIIRSG 166
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F VQ L+ MY+ +D + ++ DEM R V+SW+ +I + + A+ +
Sbjct: 167 FLDIPSVQNSLLSMYAD-NDMERAEELFDEMCER--DVISWSVMIGGYVQTGEAKMALQL 223
Query: 121 LKEMWV-LGLELSASTFVSVVSGCSFRQGISMHCCVYKLGL---LNNEIPLANSVMSMYA 176
EM +EL T VSV+ C+ ISM V+ + + L+ ++ + NS++ MY+
Sbjct: 224 FLEMTSNASIELDGITMVSVLKACANTGDISMGRSVHGVVICRGLDYDLFVGNSIIDMYS 283
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K A F+E+ + VSW +II G V +EA L M + D V +N
Sbjct: 284 KCDDHESAFKAFNEMPCRNTVSWNSIISGLVRTEKHSEALSLFYSMGKAGFRADEVTLVN 343
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
L+ C + F +HS++++ GY + + N L+ Y+KC +ELA ++FD + K
Sbjct: 344 LLQSCKYFVDPFQCKFIHSIVIRWGYELNEFVINSLIDAYSKCDLIELAWKLFDRLKTKD 403
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEE 356
W++MI G+ G P EA+ LF+ + + +PN T+ + L A + L + K
Sbjct: 404 TVSWSAMIAGFNHCGKPDEAIALFQEMNQAQEKPNGVTILSLLEAFSVSADLKRSKWAHG 463
Query: 357 YIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQ 416
+ GL + V T+++ M++KCG I +++ F+++P+K++ W AMI ++G+
Sbjct: 464 IAIRRGLAAEVAVGTAILDMYAKCGEIGLSRKAFDQIPEKNIVSWGAMIAACGMNGLARD 523
Query: 417 ALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCL 476
AL L +M+ + GLKP+ V S+LSACSH G+V++GLSFF++M + G+EP +EHY C+
Sbjct: 524 ALALLSEMK-LHGLKPNVVTTLSVLSACSHGGLVEEGLSFFENMVQDHGVEPGLEHYSCM 582
Query: 477 VDLLGRAGRFDLALKTIHEMPVEVQ--AQVWAPLLSACMKHHNVELGEYAAKNLLTLNPG 534
VD+L RAG+ + A+ I +MP ++ A +W LLSAC N LG AA +L L P
Sbjct: 583 VDMLSRAGKLNSAMNLIEKMPERMRDGAGLWGALLSACRSSGNSRLGAGAAFRVLELEPQ 642
Query: 535 STGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHL 594
S+ Y L ++++ ++G+W +AA R L+ R + G+S V ++ FVAGD SH
Sbjct: 643 SSAGYFLASSMYAASGLWADAARMRWLVKARGVRVVAGYSLVHVEDKAWRFVAGDESHPR 702
Query: 595 SVDIRKTLKELH 606
+ +I +++LH
Sbjct: 703 AGEIWGVVEQLH 714
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 106/384 (27%), Positives = 180/384 (46%), Gaps = 19/384 (4%)
Query: 116 EAILVLKEMWVLGLELSASTFV-SVVSGCSFRQGISMHCCVYKLGLLNNEIPLANSVMSM 174
EA +M G +L+ T V S++ CS G ++ NSV+
Sbjct: 32 EACSRYHQMKKAGAQLTDPTLVHSILKACSSLPG------------FDSLTSTGNSVLDF 79
Query: 175 YAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVF 234
Y K G ++ A +FD + VSW +I G+++ G ++ Q R ++ P++
Sbjct: 80 YMKTGALDSALFVFDSMRSRDSVSWNIMIHGHLSRGASDKGLWWFRQARVIAFEPNVSTL 139
Query: 235 LNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLE 294
+ I C +G + L MH +++SG+ + + N L+SMY D+E A +FD + E
Sbjct: 140 VLAIHACRSLGAMEEGLKMHGYIIRSGFLDIPSVQNSLLSMYAD-NDMERAEELFDEMCE 198
Query: 295 KSVFLWTSMIGGYAQLGYPSEAVNLFKRLL-KTSVRPNEATLATTLSACAELGSLSKGKE 353
+ V W+ MIGGY Q G A+ LF + S+ + T+ + L ACA G +S G+
Sbjct: 199 RDVISWSVMIGGYVQTGEAKMALQLFLEMTSNASIELDGITMVSVLKACANTGDISMGRS 258
Query: 354 IEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGM 413
+ ++ GL+ + V S+I M+SKC A + F +P ++ W+++I+G
Sbjct: 259 VHGVVICRGLDYDLFVGNSIIDMYSKCDDHESAFKAFNEMPCRNTVSWNSIISGLVRTEK 318
Query: 414 GDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDD-GLSFFKSMQSNFGIEPSIEH 472
+AL+LFY M G + D V ++L +C + VD F S+ +G E +
Sbjct: 319 HSEALSLFYSMGKA-GFRADEVTLVNLLQSCKY--FVDPFQCKFIHSIVIRWGYELNEFV 375
Query: 473 YLCLVDLLGRAGRFDLALKTIHEM 496
L+D + +LA K +
Sbjct: 376 INSLIDAYSKCDLIELAWKLFDRL 399
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 119/237 (50%), Gaps = 2/237 (0%)
Query: 261 GYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLF 320
G+++ N ++ Y K G L+ A VFD++ + W MI G+ G + + F
Sbjct: 65 GFDSLTSTGNSVLDFYMKTGALDSALFVFDSMRSRDSVSWNIMIHGHLSRGASDKGLWWF 124
Query: 321 KRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKC 380
++ + PN +TL + AC LG++ +G ++ YI+ +G VQ SL+ M++
Sbjct: 125 RQARVIAFEPNVSTLVLAIHACRSLGAMEEGLKMHGYIIRSGFLDIPSVQNSLLSMYAD- 183
Query: 381 GRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSI 440
+ +A+E+F+ + ++D+ WS MI GY G AL LF +M ++ D + S+
Sbjct: 184 NDMERAEELFDEMCERDVISWSVMIGGYVQTGEAKMALQLFLEMTSNASIELDGITMVSV 243
Query: 441 LSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMP 497
L AC+++G + G S + G++ + ++D+ + + A K +EMP
Sbjct: 244 LKACANTGDISMGRSVHGVVICR-GLDYDLFVGNSIIDMYSKCDDHESAFKAFNEMP 299
>gi|449447363|ref|XP_004141438.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
[Cucumis sativus]
Length = 1573
Score = 336 bits (862), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 188/621 (30%), Positives = 326/621 (52%), Gaps = 12/621 (1%)
Query: 9 GSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQ 68
G + + ++L++ + +S T ++L A + + G+++H+ V+K F V
Sbjct: 873 GQIVAAIDCFKTLLRSTIGHDSVTLVIILSAAVGADDLDLGEQIHALVIKSSFAPVVPVS 932
Query: 69 TGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLG 128
L++MYSK ++ K P ++SWN++IS++++ L EAI +++ G
Sbjct: 933 NSLMNMYSKAGVVYAAEKTFINSPEL--DLISWNTMISSYAQNNLEMEAICTFRDLLRDG 990
Query: 129 LELSASTFVSVVSGCS-------FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKV 181
L+ T SV+ CS F G +H K G++N+ ++ +++ +Y+K GK+
Sbjct: 991 LKPDQFTLASVLRACSTGDEGEYFTLGSQVHVYAIKCGIINDSF-VSTALIDLYSKGGKM 1049
Query: 182 NEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGC 241
+EA + + + SW I+ GY+ +A + M M + D + I
Sbjct: 1050 DEAEFLLHGKYDFDLASWNAIMFGYIKSNKSRKALEHFSLMHEMGIPIDEITLATAIKAS 1109
Query: 242 AQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWT 301
+ NL + + +K G+NN+ + + ++ MY KCGD+ A +F + WT
Sbjct: 1110 GCLINLKQGKQIQAYAIKLGFNNDLWVSSGVLDMYIKCGDMPNALELFGEISRPDEVAWT 1169
Query: 302 SMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLN 361
+MI GY + G A++++ + + V+P+E T AT + A + L +L +GK+I +V
Sbjct: 1170 TMISGYIENGDEDHALSVYHLMRVSGVQPDEYTFATLIKASSCLTALEQGKQIHANVVKL 1229
Query: 362 GLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLF 421
+ V TSL+ M+ KCG + A VF ++ + + W+AM+ G A HG D+ALNLF
Sbjct: 1230 DYSLDHFVGTSLVDMYCKCGSVQDAYRVFRKMDVRKVVFWNAMLLGLAQHGHVDEALNLF 1289
Query: 422 YKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLG 481
MQ G++PD V + +LSACSHSG+ + +F +M +GI P IEHY CLVD LG
Sbjct: 1290 RTMQS-NGIQPDKVTFIGVLSACSHSGLFSEAYKYFDAMFKTYGITPEIEHYSCLVDALG 1348
Query: 482 RAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYIL 541
RAGR A I MP + A ++ LL AC + E + A LL L+P + Y+L
Sbjct: 1349 RAGRIQEAENVIASMPFKASASMYRALLGACRTKGDAETAKRVADKLLALDPSDSSAYVL 1408
Query: 542 MANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKT 601
++N++ ++ W + AR +M + + K+PG+S +++ V +FV DRSH + I +
Sbjct: 1409 LSNIYAASRQWDDVTDARNMMKLKNVKKDPGFSWIDVKNKVHLFVVDDRSHPQASLIYEK 1468
Query: 602 LKELHIKLLEAG-YIAEADIV 621
+++L ++ E G Y+ + D
Sbjct: 1469 IEDLMKRIREEGSYVPDTDFT 1489
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 130/459 (28%), Positives = 222/459 (48%), Gaps = 22/459 (4%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINS---IWDGKRVHSHVL 57
MI + N E + T+ +L+ G+ + FT VL+AC+ + G +VH + +
Sbjct: 966 MISSYAQNNLEMEAICTFRDLLRDGLKPDQFTLASVLRACSTGDEGEYFTLGSQVHVYAI 1025
Query: 58 KVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLR-----SVVSWNSIISAHSRAC 112
K G D+FV T LID+YSK +DE L + SWN+I+ + ++
Sbjct: 1026 KCGIINDSFVSTALIDLYSKGGK-------MDEAEFLLHGKYDFDLASWNAIMFGYIKSN 1078
Query: 113 LNDEAILVLKEMWVLGLELSASTFVSVV--SGC--SFRQGISMHCCVYKLGLLNNEIPLA 168
+ +A+ M +G+ + T + + SGC + +QG + KLG NN++ ++
Sbjct: 1079 KSRKALEHFSLMHEMGIPIDEITLATAIKASGCLINLKQGKQIQAYAIKLG-FNNDLWVS 1137
Query: 169 NSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVT 228
+ V+ MY K G + A +F EI V+WTT+I GY+ G+ + A + + MR V
Sbjct: 1138 SGVLDMYIKCGDMPNALELFGEISRPDEVAWTTMISGYIENGDEDHALSVYHLMRVSGVQ 1197
Query: 229 PDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRV 288
PD F LI + + L +H+ ++K Y+ + + LV MY KCG ++ A RV
Sbjct: 1198 PDEYTFATLIKASSCLTALEQGKQIHANVVKLDYSLDHFVGTSLVDMYCKCGSVQDAYRV 1257
Query: 289 FDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSL 348
F + + V W +M+ G AQ G+ EA+NLF+ + ++P++ T LSAC+ G
Sbjct: 1258 FRKMDVRKVVFWNAMLLGLAQHGHVDEALNLFRTMQSNGIQPDKVTFIGVLSACSHSGLF 1317
Query: 349 SKG-KEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLA-VWSAMIN 406
S+ K + G+ + + L+ + GRI +A+ V +P K A ++ A++
Sbjct: 1318 SEAYKYFDAMFKTYGITPEIEHYSCLVDALGRAGRIQEAENVIASMPFKASASMYRALLG 1377
Query: 407 GYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACS 445
G + A + K+ ++ A V S + A S
Sbjct: 1378 ACRTKGDAETAKRVADKLLALDPSDSSAYVLLSNIYAAS 1416
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 101/397 (25%), Positives = 184/397 (46%), Gaps = 32/397 (8%)
Query: 52 VHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRA 111
VH + +K+GF+ D FV L+++Y K +R + D+MP R V WN ++ A+
Sbjct: 739 VHGYAVKIGFELDLFVSGALVNIYCKYGLVGQARLLFDKMPER--DAVLWNVMLKAYVEN 796
Query: 112 CLNDEAILVLKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLG--LLNNEIPLAN 169
DEA+ G F ++HC + + + NN A
Sbjct: 797 SFQDEALRFFSAFHRSGF---------------FPDFSNLHCVIGGVNSDVSNNRKRHAE 841
Query: 170 SVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTP 229
V + K ++ +IF +W + +++ G + A + R ++
Sbjct: 842 QVKAYAMKMFPFDQGSNIF---------AWNKKLTEFLHAGQIVAAIDCFKTLLRSTIGH 892
Query: 230 DLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVF 289
D V + ++ +L L +H+L++KS + P+ N L++MY+K G + A + F
Sbjct: 893 DSVTLVIILSAAVGADDLDLGEQIHALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEKTF 952
Query: 290 DAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACA---ELG 346
E + W +MI YAQ EA+ F+ LL+ ++P++ TLA+ L AC+ E
Sbjct: 953 INSPELDLISWNTMISSYAQNNLEMEAICTFRDLLRDGLKPDQFTLASVLRACSTGDEGE 1012
Query: 347 SLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMIN 406
+ G ++ Y + G+ ++ V T+LI ++SK G++++A+ + D DLA W+A++
Sbjct: 1013 YFTLGSQVHVYAIKCGIINDSFVSTALIDLYSKGGKMDEAEFLLHGKYDFDLASWNAIMF 1072
Query: 407 GYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSA 443
GY +AL F + H G+ D + + + A
Sbjct: 1073 GYIKSNKSRKALEHF-SLMHEMGIPIDEITLATAIKA 1108
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 122/460 (26%), Positives = 213/460 (46%), Gaps = 46/460 (10%)
Query: 49 GKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAH 108
GKR H+ ++ G D ++ LI MYSKC S+R+V D+ R +V+WNSI++A+
Sbjct: 630 GKRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSD--RDLVTWNSILAAY 687
Query: 109 SR-ACLNDEAIL-------VLKEMWVLGLELSASTFVSVVSGCSFRQ-GISMHCCVYKLG 159
++ A + E +L +L+E L+ + + + F Q ++H K+G
Sbjct: 688 AQFADSSYENVLEGFRLFGLLREFGFSITRLTLAPLLKLCLLSGFVQVSETVHGYAVKIG 747
Query: 160 LLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLC 219
++ ++ +++++Y K+G V +AR +FD++ E V W ++ YV +EA
Sbjct: 748 -FELDLFVSGALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKAYVENSFQDEALRFF 806
Query: 220 NQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKC 279
+ R PD F N L C G + S +N V Y
Sbjct: 807 SAFHRSGFFPD---FSN--LHCVIGG------------VNSDVSNNRKRHAEQVKAY--- 846
Query: 280 GDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTL 339
A ++F ++F W + + G A++ FK LL++++ + TL L
Sbjct: 847 -----AMKMFPFDQGSNIFAWNKKLTEFLHAGQIVAAIDCFKTLLRSTIGHDSVTLVIIL 901
Query: 340 SACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLA 399
SA L G++I ++ + V SL++M+SK G + A++ F P+ DL
Sbjct: 902 SAAVGADDLDLGEQIHALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEKTFINSPELDLI 961
Query: 400 VWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKS 459
W+ MI+ YA + + +A+ F + +GLKPD S+L ACS D+G F
Sbjct: 962 SWNTMISSYAQNNLEMEAICTFRDLLR-DGLKPDQFTLASVLRACSTG---DEGEYFTLG 1017
Query: 460 MQSN-FGIEPSI--EHYL--CLVDLLGRAGRFDLALKTIH 494
Q + + I+ I + ++ L+DL + G+ D A +H
Sbjct: 1018 SQVHVYAIKCGIINDSFVSTALIDLYSKGGKMDEAEFLLH 1057
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 98/195 (50%), Gaps = 6/195 (3%)
Query: 244 VGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSM 303
+ +L L H+ ++ SG + L N L++MY+KCG L AR+VFD ++ + W S+
Sbjct: 624 MADLKLGKRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLVTWNSI 683
Query: 304 IGGYAQLGYPS-----EAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYI 358
+ YAQ S E LF L + TLA L C G + + + Y
Sbjct: 684 LAAYAQFADSSYENVLEGFRLFGLLREFGFSITRLTLAPLLKLCLLSGFVQVSETVHGYA 743
Query: 359 VLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQAL 418
V G E + V +L++++ K G + +A+ +F+++P++D +W+ M+ Y + D+AL
Sbjct: 744 VKIGFELDLFVSGALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKAYVENSFQDEAL 803
Query: 419 NLFYKMQHVEGLKPD 433
F+ H G PD
Sbjct: 804 R-FFSAFHRSGFFPD 817
>gi|147812109|emb|CAN61522.1| hypothetical protein VITISV_010801 [Vitis vinifera]
Length = 674
Score = 336 bits (862), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 196/588 (33%), Positives = 322/588 (54%), Gaps = 23/588 (3%)
Query: 37 LKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLR 96
LK A + + GK++H+HV+K+G +Q ++ +Y KC +F K+ DEMP L+
Sbjct: 80 LKISAKLGFLHGGKQLHAHVIKLGXCNLLSLQNQVLHVYVKCKEFNDVCKMFDEMP--LK 137
Query: 97 SVVSWNSIIS---------AHSRACLNDEAILVLKEMW----VLGLELSASTFVSVVSGC 143
+VVSWN++I A R + +VL+ M L L AS ++ V C
Sbjct: 138 NVVSWNTLICGVVEGNCKFALVRLGFHCFRQMVLEMMAPNCITLNGLLRASIELNDVGIC 197
Query: 144 SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTII 203
RQ +HC + K G +N + ++++ YAKFG V+EA+S FDE+ +V W ++
Sbjct: 198 --RQ---LHCFILKSGFDSNCF-VGSALVDSYAKFGLVDEAQSAFDEVSSRDLVLWNVMV 251
Query: 204 GGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYN 263
Y G +AFG+ MR V D F ++I C +G+ L +H L+++ ++
Sbjct: 252 SCYALNGVQGKAFGVFKLMRLEGVKGDXFTFTSMINSCGVLGSCGLGKQVHGLIIRLSFD 311
Query: 264 NEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRL 323
+ + + LV MY+K ++E AR+ FD +J K++ WT+M GY Q G E + L + +
Sbjct: 312 LDVLVASALVDMYSKNENIEDARKAFDGMJVKNIVSWTTMXVGYGQHGDGKEXMRLLQEM 371
Query: 324 LKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRI 383
++ P+E LA+ LS+C L + S+ ++ Y+V NG E+ + +L+ +SKCG I
Sbjct: 372 IRVYTYPDELALASILSSCGNLSATSEVVQVHAYVVENGFEAFLSIANALVSAYSKCGSI 431
Query: 384 NKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSA 443
A + F V + D+ W++++ YA HG+ Q +++F K+ ++PD V + +LSA
Sbjct: 432 GSAFQSFSSVAEPDIISWTSLMGAYAFHGLSKQGVDVFEKILS-SNVRPDKVAFLGVLSA 490
Query: 444 CSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQ 503
C+H G V +GL +F M + + I P EHY ++DLLGRAG D A+ + MPVE ++
Sbjct: 491 CAHGGFVLEGLHYFNLMINVYQIMPDSEHYTSIIDLLGRAGFLDEAVNLLTSMPVEPRSD 550
Query: 504 VWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMD 563
L AC + NV L +A++ L + P G Y LM+N++ S G W + A R LM
Sbjct: 551 TLGAFLGACKVYRNVGLARWASEKLFVMEPNEPGKYSLMSNMYASVGHWFDVARVRKLMR 610
Query: 564 DRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKELHIKLLE 611
+R K PG S +E G V FV+ D++H +V + L +L ++L++
Sbjct: 611 ERCDFKVPGCSWMETAGEVHTFVSRDKTHPRAVQVYGML-DLLVRLMK 657
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 101/371 (27%), Positives = 195/371 (52%), Gaps = 8/371 (2%)
Query: 29 NSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVL 88
N T +L+A +N + +++H +LK GF + FV + L+D Y+K ++
Sbjct: 177 NCITLNGLLRASIELNDVGICRQLHCFILKSGFDSNCFVGSALVDSYAKFGLVDEAQSAF 236
Query: 89 DEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGC----S 144
DE V R +V WN ++S ++ + +A V K M + G++ TF S+++ C S
Sbjct: 237 DE--VSSRDLVLWNVMVSCYALNGVQGKAFGVFKLMRLEGVKGDXFTFTSMINSCGVLGS 294
Query: 145 FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIG 204
G +H + +L + ++ +A++++ MY+K + +AR FD + +IVSWTT+
Sbjct: 295 CGLGKQVHGLIIRLS-FDLDVLVASALVDMYSKNENIEDARKAFDGMJVKNIVSWTTMXV 353
Query: 205 GYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNN 264
GY G+ E L +M R+ PD + +++ C + + +H+ ++++G+
Sbjct: 354 GYGQHGDGKEXMRLLQEMIRVYTYPDELALASILSSCGNLSATSEVVQVHAYVVENGFEA 413
Query: 265 EDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLL 324
+ N LVS Y+KCG + A + F +V E + WTS++G YA G + V++F+++L
Sbjct: 414 FLSIANALVSAYSKCGSIGSAFQSFSSVAEPDIISWTSLMGAYAFHGLSKQGVDVFEKIL 473
Query: 325 KTSVRPNEATLATTLSACAELGSLSKGKEIEEYIV-LNGLESNRQVQTSLIHMFSKCGRI 383
++VRP++ LSACA G + +G ++ + + + + TS+I + + G +
Sbjct: 474 SSNVRPDKVAFLGVLSACAHGGFVLEGLHYFNLMINVYQIMPDSEHYTSIIDLLGRAGFL 533
Query: 384 NKAKEVFERVP 394
++A + +P
Sbjct: 534 DEAVNLLTSMP 544
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 98/380 (25%), Positives = 172/380 (45%), Gaps = 43/380 (11%)
Query: 8 NGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFV 67
NG + + M GV G+ FTF ++ +C + S GK+VH ++++ F D V
Sbjct: 257 NGVQGKAFGVFKLMRLEGVKGDXFTFTSMINSCGVLGSCGLGKQVHGLIIRLSFDLDVLV 316
Query: 68 QTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVL 127
+ L+DMYSK + +RK D M V +++VSW ++ + + E + +L+EM +
Sbjct: 317 ASALVDMYSKNENIEDARKAFDGMJV--KNIVSWTTMXVGYGQHGDGKEXMRLLQEMIRV 374
Query: 128 GLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNE 183
S++S C + + + +H V + G + +AN+++S Y+K G +
Sbjct: 375 YTYPDELALASILSSCGNLSATSEVVQVHAYVVENG-FEAFLSIANALVSAYSKCGSIGS 433
Query: 184 ARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQ 243
A F + E I+SWT+++G Y G + + ++ +V PD V FL ++ CA
Sbjct: 434 AFQSFSSVAEPDIISWTSLMGAYAFHGLSKQGVDVFEKILSSNVRPDKVAFLGVLSACAH 493
Query: 244 VGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSM 303
G F+ +H NL++++Y D E +TS+
Sbjct: 494 GG--FVLEGLHYF-------------NLMINVYQIMPDSE---------------HYTSI 523
Query: 304 IGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGL 363
I + G+ EAVNL L V P TL L AC ++ + E + + +
Sbjct: 524 IDLLGRAGFLDEAVNL---LTSMPVEPRSDTLGAFLGACKVYRNVGLARWASEKLFV--M 578
Query: 364 ESNRQVQTSLI-HMFSKCGR 382
E N + SL+ +M++ G
Sbjct: 579 EPNEPGKYSLMSNMYASVGH 598
>gi|147833477|emb|CAN75184.1| hypothetical protein VITISV_001911 [Vitis vinifera]
Length = 596
Score = 336 bits (862), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 193/562 (34%), Positives = 306/562 (54%), Gaps = 31/562 (5%)
Query: 65 AFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSR-ACLNDEAILVLKE 123
A++Q G + + SK + ++ ++ SWN+I+++HS+ C D + + K
Sbjct: 5 AYIQLGSLHVASKAFNHIT-----------FENLHSWNTILASHSKNKCFYD-VLQLFKR 52
Query: 124 MWVLGLELSASTFVSVVSGC---SFRQGISM-HCCVYKLGLLNNEIPLANSVMSMYAKFG 179
M G + + V V C S QG + H KL L + +A ++M++Y + G
Sbjct: 53 MLKEGKLVDSFNLVFAVKACFGLSLFQGAKLFHSLAIKL-RLEGDPYVAPALMNVYTELG 111
Query: 180 KVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLIL 239
+ EA +F+E+ + V W +I GY+N F L ++MRR D V LI
Sbjct: 112 SLEEAHKVFEEVPLKNSVIWGVMIKGYLNFSEEFGVFELFSRMRRSGFELDPFVVEGLIQ 171
Query: 240 GCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFL 299
C V + H L SGY +Y G L+ A +F+ + + V +
Sbjct: 172 ACGNVYAGKEGKTFHGLYFSSGY------------VYEVRGFLDXALXLFEXIXYRBVVV 219
Query: 300 WTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIV 359
W+++I G+A+ G E++++F+++L SV PN T A+ + AC+ LGSL +G+ + Y++
Sbjct: 220 WSAIIAGFARNGRALESISMFRQMLADSVTPNSVTFASIVLACSSLGSLKQGRSVHGYMI 279
Query: 360 LNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALN 419
NG+E + + TS I M++KCG I A VF ++P+K++ WS MING+ +HG+ +ALN
Sbjct: 280 RNGVELDVKNYTSFIDMYAKCGCIVTAYRVFCQIPEKNVFSWSTMINGFGMHGLCAEALN 339
Query: 420 LFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDL 479
LFY+M+ V L P++V + S+LSACSHSG +++G S FKSM ++GI P EHY C+VDL
Sbjct: 340 LFYEMRSVNQL-PNSVTFVSVLSACSHSGRIEEGWSHFKSMSRDYGITPVEEHYACMVDL 398
Query: 480 LGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNY 539
LGRAG+ D AL I+ MP E A W LL AC H EL E AK LL L +G Y
Sbjct: 399 LGRAGKIDEALSFINNMPTEPGASAWGALLGACRIHRRAELAEEVAKKLLPLESDQSGVY 458
Query: 540 ILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIR 599
++++N++ GMW+ R M ++ L K G++ +EI + +F + DR + + I
Sbjct: 459 VMLSNIYADVGMWEMVKKTRLKMCEKGLLKIVGFTSIEIKEKLYLFSSEDRFAYKNTQIE 518
Query: 600 KTLKELHIKLLEAGYIAEADIV 621
L ++ E GY+ + V
Sbjct: 519 SLWNSLKERMRELGYVPDLRFV 540
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 106/434 (24%), Positives = 198/434 (45%), Gaps = 21/434 (4%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
++ + + N F + L + ML+ G +SF +KAC ++ K HS +K+
Sbjct: 33 ILASHSKNKCFYDVLQLFKRMLKEGKLVDSFNLVFAVKACFGLSLFQGAKLFHSLAIKLR 92
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+ D +V L+++Y++ + KV +E+P L++ V W +I + +
Sbjct: 93 LEGDPYVAPALMNVYTELGSLEEAHKVFEEVP--LKNSVIWGVMIKGYLNFSEEFGVFEL 150
Query: 121 LKEMWVLGLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
M G EL ++ C + ++G + H + G + Y
Sbjct: 151 FSRMRRSGFELDPFVVEGLIQACGNVYAGKEGKTFHGLYFSSGYV-------------YE 197
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
G ++ A +F+ I +V W+ II G+ G E+ + QM SVTP+ V F +
Sbjct: 198 VRGFLDXALXLFEXIXYRBVVVWSAIIAGFARNGRALESISMFRQMLADSVTPNSVTFAS 257
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
++L C+ +G+L S+H ++++G + + MY KCG + A RVF + EK+
Sbjct: 258 IVLACSSLGSLKQGRSVHGYMIRNGVELDVKNYTSFIDMYAKCGCIVTAYRVFCQIPEKN 317
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKG-KEIE 355
VF W++MI G+ G +EA+NLF + + PN T + LSAC+ G + +G +
Sbjct: 318 VFSWSTMINGFGMHGLCAEALNLFYEMRSVNQLPNSVTFVSVLSACSHSGRIEEGWSHFK 377
Query: 356 EYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVP-DKDLAVWSAMINGYAIHGMG 414
G+ + ++ + + G+I++A +P + + W A++ IH
Sbjct: 378 SMSRDYGITPVEEHYACMVDLLGRAGKIDEALSFINNMPTEPGASAWGALLGACRIHRRA 437
Query: 415 DQALNLFYKMQHVE 428
+ A + K+ +E
Sbjct: 438 ELAEEVAKKLLPLE 451
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 85/349 (24%), Positives = 160/349 (45%), Gaps = 23/349 (6%)
Query: 171 VMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQM-RRMSVTP 229
+ Y + G ++ A F+ I ++ SW TI+ + + N+ F Q+ +RM
Sbjct: 2 IFGAYIQLGSLHVASKAFNHITFENLHSWNTILASH----SKNKCFYDVLQLFKRMLKEG 57
Query: 230 DLVVFLNLILGCAQVGNLFL---ALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELAR 286
LV NL+ L L A HSL +K + + L+++YT+ G LE A
Sbjct: 58 KLVDSFNLVFAVKACFGLSLFQGAKLFHSLAIKLRLEGDPYVAPALMNVYTELGSLEEAH 117
Query: 287 RVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELG 346
+VF+ V K+ +W MI GY LF R+ ++ + + + AC +
Sbjct: 118 KVFEEVPLKNSVIWGVMIKGYLNFSEEFGVFELFSRMRRSGFELDPFVVEGLIQACGNVY 177
Query: 347 SLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMIN 406
+ +GK +G +++ G ++ A +FE + +B+ VWSA+I
Sbjct: 178 AGKEGKTFHGLYFSSG------------YVYEVRGFLDXALXLFEXIXYRBVVVWSAIIA 225
Query: 407 GYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGI 466
G+A +G +++++F +M + + P++V + SI+ ACS G + G S M N G+
Sbjct: 226 GFARNGRALESISMFRQML-ADSVTPNSVTFASIVLACSSLGSLKQGRSVHGYMIRN-GV 283
Query: 467 EPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKH 515
E +++Y +D+ + G A + ++P E W+ +++ H
Sbjct: 284 ELDVKNYTSFIDMYAKCGCIVTAYRVFCQIP-EKNVFSWSTMINGFGMH 331
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 87/186 (46%), Gaps = 1/186 (0%)
Query: 271 LLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRP 330
++ Y + G L +A + F+ + +++ W +++ +++ + + LFKR+LK
Sbjct: 1 MIFGAYIQLGSLHVASKAFNHITFENLHSWNTILASHSKNKCFYDVLQLFKRMLKEGKLV 60
Query: 331 NEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVF 390
+ L + AC L K + LE + V +L++++++ G + +A +VF
Sbjct: 61 DSFNLVFAVKACFGLSLFQGAKLFHSLAIKLRLEGDPYVAPALMNVYTELGSLEEAHKVF 120
Query: 391 ERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMV 450
E VP K+ +W MI GY LF +M+ G + D V ++ AC +
Sbjct: 121 EEVPLKNSVIWGVMIKGYLNFSEEFGVFELFSRMRR-SGFELDPFVVEGLIQACGNVYAG 179
Query: 451 DDGLSF 456
+G +F
Sbjct: 180 KEGKTF 185
>gi|297797117|ref|XP_002866443.1| hypothetical protein ARALYDRAFT_919404 [Arabidopsis lyrata subsp.
lyrata]
gi|297312278|gb|EFH42702.1| hypothetical protein ARALYDRAFT_919404 [Arabidopsis lyrata subsp.
lyrata]
Length = 749
Score = 336 bits (861), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 195/611 (31%), Positives = 328/611 (53%), Gaps = 11/611 (1%)
Query: 5 STNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQD 64
+T NG + + + + +L + + + ++AC ++SI G+ VH+ V+ GF
Sbjct: 139 ATENGFYRDGIDYFVEILGCDIVPDEYALSAAIQACIGVDSIVVGEMVHAQVITRGFSSR 198
Query: 65 AFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEM 124
FV T L+ MY+K S KV + + R+ VSWN++IS L EA M
Sbjct: 199 TFVNTSLLGMYAKLGRIGDSCKVFNSL--ENRNQVSWNAMISGFVSNGLYAEAYNSFLRM 256
Query: 125 WVLGLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGK 180
+ + + F+SV +G ++ +++G+ +N I + +++ M+AK G
Sbjct: 257 LGEEIRPNVACFISVSKAIGQLGDVEKGRYINRIAFEIGMQSN-IHVGTALIDMFAKCGC 315
Query: 181 VNEARSIF--DEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLI 238
V E+ S+F + G + W +I G+ G+ EA L +M + ++ D+ + + +
Sbjct: 316 VTESWSVFVSNFSGCGVNLPWNAMISGFTISGHGEEAMLLFLRMCQNNIKRDVYTYCSTL 375
Query: 239 LGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVF 298
A + +L +H ++ KSG L N L+ Y KCG+L+ R++FD E +
Sbjct: 376 NSIADMRSLEYVKQLHGMIWKSGSIGVS-LCNALMDAYAKCGELDAMRKLFDTWEESNQI 434
Query: 299 LWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYI 358
WT+++ Y+Q +A+++F ++ + +PN+ T + L++CA L SL G+++
Sbjct: 435 SWTTLVTAYSQSSEWEDALSVFSQMREMGFQPNQVTFSGVLASCASLCSLEYGQQVHSLT 494
Query: 359 VLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQAL 418
G ++ V++ LI M++KCG + A +VFE + D D+ W+AMI+GYA HGM AL
Sbjct: 495 CKTGFARDKCVESVLIDMYAKCGSVRDAIKVFESLKDPDVISWTAMISGYAQHGMAKDAL 554
Query: 419 NLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVD 478
LF KM+ V P++ + +L ACSH G+VD+GL +F M+ +G+ P IEHY C+VD
Sbjct: 555 ELFRKMELVLP-NPNSATFLCLLFACSHGGLVDEGLRYFHLMEERYGLVPEIEHYACVVD 613
Query: 479 LLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGN 538
+LGR GR A K I +MP+E +VW+ LL AC H N++L + AA+ +L+ NP
Sbjct: 614 ILGRVGRLTEAWKFIMKMPIEPDEKVWSTLLGACRVHGNIQLAKIAAQKVLSYNPDDFAA 673
Query: 539 YILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDI 598
+L++N + AG + R +M + + KE G S + I G + F +GD+ H DI
Sbjct: 674 LVLLSNTYREAGNIEGGLNVRNMMKSQAMRKETGMSWICIGGKIHKFCSGDQYHPQKDDI 733
Query: 599 RKTLKELHIKL 609
KTL L K+
Sbjct: 734 YKTLNVLMEKV 744
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 128/487 (26%), Positives = 233/487 (47%), Gaps = 20/487 (4%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI +NG + E +++ ML + N F V KA + + G+ ++ ++G
Sbjct: 236 MISGFVSNGLYAEAYNSFLRMLGEEIRPNVACFISVSKAIGQLGDVEKGRYINRIAFEIG 295
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
Q + V T LIDM++KC S V + WN++IS + + +EA+L+
Sbjct: 296 MQSNIHVGTALIDMFAKCGCVTESWSVFVSNFSGCGVNLPWNAMISGFTISGHGEEAMLL 355
Query: 121 LKEMWVLGLELSASTFVSVVSGCSFRQGI----SMHCCVYKLGLLNNEIPLANSVMSMYA 176
M ++ T+ S ++ + + + +H ++K G + + L N++M YA
Sbjct: 356 FLRMCQNNIKRDVYTYCSTLNSIADMRSLEYVKQLHGMIWKSGSIG--VSLCNALMDAYA 413
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K G+++ R +FD E++ +SWTT++ Y +A + +QMR M P+ V F
Sbjct: 414 KCGELDAMRKLFDTWEESNQISWTTLVTAYSQSSEWEDALSVFSQMREMGFQPNQVTFSG 473
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
++ CA + +L +HSL K+G+ + ++++L+ MY KCG + A +VF+++ +
Sbjct: 474 VLASCASLCSLEYGQQVHSLTCKTGFARDKCVESVLIDMYAKCGSVRDAIKVFESLKDPD 533
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEI-- 354
V WT+MI GYAQ G +A+ LF+++ PN AT L AC+ G + +G
Sbjct: 534 VISWTAMISGYAQHGMAKDALELFRKMELVLPNPNSATFLCLLFACSHGGLVDEGLRYFH 593
Query: 355 ---EEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVP-DKDLAVWSAMINGYAI 410
E Y GL + ++ + + GR+ +A + ++P + D VWS ++ +
Sbjct: 594 LMEERY----GLVPEIEHYACVVDILGRVGRLTEAWKFIMKMPIEPDEKVWSTLLGACRV 649
Query: 411 HGMGDQALNLFYKMQHVEGLKPDAVVYTSILS-ACSHSGMVDDGLSFFKSMQSNFGIEPS 469
HG A Q V PD +LS +G ++ GL+ M+S + +
Sbjct: 650 HGNIQLAK---IAAQKVLSYNPDDFAALVLLSNTYREAGNIEGGLNVRNMMKSQAMRKET 706
Query: 470 IEHYLCL 476
++C+
Sbjct: 707 GMSWICI 713
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 102/378 (26%), Positives = 179/378 (47%), Gaps = 23/378 (6%)
Query: 145 FRQGISMHCCVYKLGLLNNEIP-LANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTII 203
++ S+H V K L+ + + N ++ Y+K AR +FDEI + S+ SWT ++
Sbjct: 77 LKKAKSIHGFVIKFQLIEKSLTVMLNQLVIAYSKCSDFGSARQVFDEIPQKSVFSWTVLM 136
Query: 204 GGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYN 263
G G + ++ + PD I C V ++ + +H+ ++ G++
Sbjct: 137 VGATENGFYRDGIDYFVEILGCDIVPDEYALSAAIQACIGVDSIVVGEMVHAQVITRGFS 196
Query: 264 NEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRL 323
+ ++ L+ MY K G + + +VF+++ ++ W +MI G+ G +EA N F R+
Sbjct: 197 SRTFVNTSLLGMYAKLGRIGDSCKVFNSLENRNQVSWNAMISGFVSNGLYAEAYNSFLRM 256
Query: 324 LKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRI 383
L +RPN A + A +LG + KG+ I G++SN V T+LI MF+KCG +
Sbjct: 257 LGEEIRPNVACFISVSKAIGQLGDVEKGRYINRIAFEIGMQSNIHVGTALIDMFAKCGCV 316
Query: 384 NKAKEVF--------ERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAV 435
++ VF +P W+AMI+G+ I G G++A+ LF +M +K D
Sbjct: 317 TESWSVFVSNFSGCGVNLP------WNAMISGFTISGHGEEAMLLFLRMCQ-NNIKRDVY 369
Query: 436 VYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLC--LVDLLGRAGRFDLALKTI 493
Y S L++ + L + K + SI LC L+D + G D A++ +
Sbjct: 370 TYCSTLNSIADM----RSLEYVKQLHGMIWKSGSIGVSLCNALMDAYAKCGELD-AMRKL 424
Query: 494 HEMPVEVQAQVWAPLLSA 511
+ E W L++A
Sbjct: 425 FDTWEESNQISWTTLVTA 442
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 118/543 (21%), Positives = 257/543 (47%), Gaps = 24/543 (4%)
Query: 36 VLKACANINSIWDGKRVHSHVLKVGFQQDAF--VQTGLIDMYSKCSDFVSSRKVLDEMPV 93
+++ A+ + K +H V+K + + + L+ YSKCSDF S+R+V DE+P
Sbjct: 67 LIRESADERCLKKAKSIHGFVIKFQLIEKSLTVMLNQLVIAYSKCSDFGSARQVFDEIP- 125
Query: 94 RLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFV--SVVSGC----SFRQ 147
+SV SW ++ + + I E +LG ++ + + + C S
Sbjct: 126 -QKSVFSWTVLMVGATENGFYRDGIDYFVE--ILGCDIVPDEYALSAAIQACIGVDSIVV 182
Query: 148 GISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYV 207
G +H V G ++ + S++ MYAK G++ ++ +F+ + + VSW +I G+V
Sbjct: 183 GEMVHAQVITRG-FSSRTFVNTSLLGMYAKLGRIGDSCKVFNSLENRNQVSWNAMISGFV 241
Query: 208 NVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDP 267
+ G EA+ +M + P++ F+++ Q+G++ ++ + + G +
Sbjct: 242 SNGLYAEAYNSFLRMLGEEIRPNVACFISVSKAIGQLGDVEKGRYINRIAFEIGMQSNIH 301
Query: 268 LDNLLVSMYTKCGDLELARRVFDAVLEKS--VFLWTSMIGGYAQLGYPSEAVNLFKRLLK 325
+ L+ M+ KCG + + VF + W +MI G+ G+ EA+ LF R+ +
Sbjct: 302 VGTALIDMFAKCGCVTESWSVFVSNFSGCGVNLPWNAMISGFTISGHGEEAMLLFLRMCQ 361
Query: 326 TSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINK 385
+++ + T +TL++ A++ SL K++ I +G + +L+ ++KCG ++
Sbjct: 362 NNIKRDVYTYCSTLNSIADMRSLEYVKQLHGMIWKSG-SIGVSLCNALMDAYAKCGELDA 420
Query: 386 AKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACS 445
+++F+ + + W+ ++ Y+ + AL++F +M+ + G +P+ V ++ +L++C+
Sbjct: 421 MRKLFDTWEESNQISWTTLVTAYSQSSEWEDALSVFSQMREM-GFQPNQVTFSGVLASCA 479
Query: 446 HSGMVDDGLSFFK-SMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQV 504
++ G + ++ F + +E L+D+ + G A+K + +
Sbjct: 480 SLCSLEYGQQVHSLTCKTGFARDKCVESV--LIDMYAKCGSVRDAIKVFESLK-DPDVIS 536
Query: 505 WAPLLSACMKHHNVE--LGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLM 562
W ++S +H + L + L+ NP S ++ + + G+ E LM
Sbjct: 537 WTAMISGYAQHGMAKDALELFRKMELVLPNPNS-ATFLCLLFACSHGGLVDEGLRYFHLM 595
Query: 563 DDR 565
++R
Sbjct: 596 EER 598
>gi|326495056|dbj|BAJ85624.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 673
Score = 336 bits (861), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 196/557 (35%), Positives = 296/557 (53%), Gaps = 9/557 (1%)
Query: 27 HGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRK 86
H + L LKA G+R+H + +K G D FV L+DMY+K D ++RK
Sbjct: 120 HDDVVLLSLALKASVRSADFRYGRRLHCNAVKAG-GADGFVMNCLVDMYAKAGDLENARK 178
Query: 87 VLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGC--- 143
V D + R+VVSW S++S + +E + + EM + S T SV+ C
Sbjct: 179 VFDR--ILGRNVVSWTSMLSGCLQNGFAEEGLALFNEMREERVLPSEYTMASVLMACTML 236
Query: 144 -SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTI 202
S QG +H V K G++ N + +V+ MY K G+V +AR +FDE+G +V WTT+
Sbjct: 237 GSLHQGRWVHGSVIKHGMVFNPF-ITAAVLDMYVKCGEVEDARRLFDELGFVDLVLWTTM 295
Query: 203 IGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGY 262
I GY G+ +A L + + + + P+ V ++ AQ+ NL L +H++ +K
Sbjct: 296 IVGYTQNGSPLDALLLFSDKKFVHIVPNSVTIATVLSASAQLRNLSLGRLIHAMSVKLLV 355
Query: 263 NNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKR 322
D + N LV MY KC L A +F + K V W S+I GY + +EA+ LF +
Sbjct: 356 IENDVVMNALVDMYAKCKALSEANGIFGRISNKDVVTWNSLIAGYVENDMGNEALMLFSQ 415
Query: 323 LLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGR 382
+ P+ ++ LSAC LG L GK Y V SN V T+L+++++KC
Sbjct: 416 MRVQGSSPDAISIVNALSACVCLGDLLIGKCFHTYAVKRAFLSNVYVNTALLNLYNKCAD 475
Query: 383 INKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILS 442
+ A+ VF + +++ W AMI GY + G +++L KM + ++P+ VV+TSILS
Sbjct: 476 LPSAQRVFSEMSERNSVTWGAMIGGYGMQGDSAGSIDLLNKMLK-DNIQPNEVVFTSILS 534
Query: 443 ACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQA 502
CSH+GMV G F SM F I PS++HY C+VD+L RAG + AL+ I +MP+
Sbjct: 535 TCSHTGMVSVGKMCFDSMAQYFNITPSMKHYACMVDVLARAGNLEEALEFIQKMPMPADI 594
Query: 503 QVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLM 562
+W L C H +E GE A ++ L+P Y+LM+NL+TS G W ++ R LM
Sbjct: 595 SIWGAFLHGCKLHSRLEFGEEAINRMMVLHPDKPDFYVLMSNLYTSYGRWDKSLAIRRLM 654
Query: 563 DDRRLTKEPGWSQVEID 579
+R L K PG S V ++
Sbjct: 655 QERGLVKLPGCSSVGLE 671
Score = 218 bits (554), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 139/427 (32%), Positives = 222/427 (51%), Gaps = 21/427 (4%)
Query: 27 HGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRK 86
HG + L L ACA + S+ + +H+ +L G + +T L+ Y+ D S+R+
Sbjct: 21 HGGALLHRL-LPACATLPSL---RALHARLLAHGLLRALRARTKLLSCYAALGDLASARR 76
Query: 87 VLDEMP----VRLRSVVSWNSIISAHSRAC-----LNDEAILVLKEMWVLGLELSASTFV 137
VLDE P R + W++ H+ A + ++ +L L L AS
Sbjct: 77 VLDETPRPDPYTYRVALGWHAAAGRHADALALHRGMRRRCPEAHDDVVLLSLALKAS--- 133
Query: 138 SVVSGCSFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIV 197
V FR G +HC K G + + N ++ MYAK G + AR +FD I ++V
Sbjct: 134 --VRSADFRYGRRLHCNAVKAGGADGFV--MNCLVDMYAKAGDLENARKVFDRILGRNVV 189
Query: 198 SWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLL 257
SWT+++ G + G E L N+MR V P ++++ C +G+L +H +
Sbjct: 190 SWTSMLSGCLQNGFAEEGLALFNEMREERVLPSEYTMASVLMACTMLGSLHQGRWVHGSV 249
Query: 258 LKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAV 317
+K G + ++ MY KCG++E ARR+FD + + LWT+MI GY Q G P +A+
Sbjct: 250 IKHGMVFNPFITAAVLDMYVKCGEVEDARRLFDELGFVDLVLWTTMIVGYTQNGSPLDAL 309
Query: 318 NLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMF 377
LF + PN T+AT LSA A+L +LS G+ I V + N V +L+ M+
Sbjct: 310 LLFSDKKFVHIVPNSVTIATVLSASAQLRNLSLGRLIHAMSVKLLVIENDVVMNALVDMY 369
Query: 378 SKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVY 437
+KC +++A +F R+ +KD+ W+++I GY + MG++AL LF +M+ V+G PDA+
Sbjct: 370 AKCKALSEANGIFGRISNKDVVTWNSLIAGYVENDMGNEALMLFSQMR-VQGSSPDAISI 428
Query: 438 TSILSAC 444
+ LSAC
Sbjct: 429 VNALSAC 435
Score = 208 bits (530), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 129/473 (27%), Positives = 246/473 (52%), Gaps = 23/473 (4%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
M+ NG EE L+ ++ M + V + +T VL AC + S+ G+ VH V+K G
Sbjct: 194 MLSGCLQNGFAEEGLALFNEMREERVLPSEYTMASVLMACTMLGSLHQGRWVHGSVIKHG 253
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+ F+ ++DMY KC + +R++ DE+ +V W ++I +++ +A+L+
Sbjct: 254 MVFNPFITAAVLDMYVKCGEVEDARRLFDELG--FVDLVLWTTMIVGYTQNGSPLDALLL 311
Query: 121 LKEMWVLGLELSASTFVSVVSGCSFRQGISM----HCCVYKLGLLNNEIPLANSVMSMYA 176
+ + + ++ T +V+S + + +S+ H KL ++ N++ + N+++ MYA
Sbjct: 312 FSDKKFVHIVPNSVTIATVLSASAQLRNLSLGRLIHAMSVKLLVIENDVVM-NALVDMYA 370
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K ++EA IF I +V+W ++I GYV NEA L +QMR +PD + +N
Sbjct: 371 KCKALSEANGIFGRISNKDVVTWNSLIAGYVENDMGNEALMLFSQMRVQGSSPDAISIVN 430
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
+ C +G+L + H+ +K + + ++ L+++Y KC DL A+RVF + E++
Sbjct: 431 ALSACVCLGDLLIGKCFHTYAVKRAFLSNVYVNTALLNLYNKCADLPSAQRVFSEMSERN 490
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGK---- 352
W +MIGGY G + +++L ++LK +++PNE + LS C+ G +S GK
Sbjct: 491 SVTWGAMIGGYGMQGDSAGSIDLLNKMLKDNIQPNEVVFTSILSTCSHTGMVSVGKMCFD 550
Query: 353 EIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVP-DKDLAVWSAMINGYAIH 411
+ +Y + + + ++ + ++ G + +A E +++P D+++W A ++G +H
Sbjct: 551 SMAQYF---NITPSMKHYACMVDVLARAGNLEEALEFIQKMPMPADISIWGAFLHGCKLH 607
Query: 412 G---MGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQ 461
G++A+N +M + KPD V S L + G D L+ + MQ
Sbjct: 608 SRLEFGEEAIN---RMMVLHPDKPDFYVLMSNLY--TSYGRWDKSLAIRRLMQ 655
>gi|449441542|ref|XP_004138541.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Cucumis sativus]
Length = 652
Score = 336 bits (861), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 199/594 (33%), Positives = 320/594 (53%), Gaps = 34/594 (5%)
Query: 33 FPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMP 92
F +L++C + + ++V + ++ GFQ + +V ++ + +R + D P
Sbjct: 70 FISLLRSCKTVALL---QKVQAQIITHGFQYNGYVAPNVVTSWVGLKQMAHARHLFDHFP 126
Query: 93 VRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCS----FRQG 148
V WN+I + E + + +M + + + TF V+ C+ F +G
Sbjct: 127 DP--KVELWNAISRGYFHNAFYREVVFLFGKMKSMDVRPNCFTFPLVLKSCAKIGAFVEG 184
Query: 149 ISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVN 208
+HC V K GL N+ +A +++ +Y+ + A +F + E +IV+WT++I GY+
Sbjct: 185 EEIHCEVIKGGLEGNQF-VATTLIDVYSGGRAIGSAYKLFVGMLERNIVAWTSMISGYI- 242
Query: 209 VGNVNEAFGLCNQM----RRMSVTP--DLVVFLNLILGCAQVGNLFLALSMHSLLLKSGY 262
LCN++ R + P D+V++ ++ G ++G++ A + +
Sbjct: 243 ---------LCNRVALARRLFDLAPERDVVLWNIMVSGYIEIGDMKAARKLFDTM----- 288
Query: 263 NNEDPLD-NLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFK 321
D + N +++ Y GD+E ++F+ + E++VF W +IGGYA G E + FK
Sbjct: 289 PYRDTMSWNTMLNGYANNGDVEACEQLFEEMPERNVFSWNGLIGGYAHNGCFFEVLRCFK 348
Query: 322 RLLKTS-VRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKC 380
R+L V PN+ATL T LSACA LG+L GK + Y G + + V +LI M+SKC
Sbjct: 349 RMLIDGLVVPNDATLVTVLSACARLGALDLGKWVHVYAATIGFKGSIYVGNALIDMYSKC 408
Query: 381 GRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSI 440
G I A EVFE + KDL W++MI G A HG G AL LF++M+ + G KPD + + +
Sbjct: 409 GLIENAMEVFESMDLKDLITWNSMICGLATHGCGADALTLFHQMK-INGEKPDGITFIGV 467
Query: 441 LSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEV 500
L +C+H G+V++G S+F SM + + I P IEHY C+VDL GRAG D A++ + MP+E
Sbjct: 468 LCSCTHLGLVEEGTSYFNSMVNEYSIAPQIEHYGCMVDLFGRAGLLDRAIEFVKRMPMEA 527
Query: 501 QAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARG 560
A +WA LL AC + N++L E A + L+ L P + NY+L++N++ G WK+ A +
Sbjct: 528 DAVIWAALLGACRIYKNIDLAELALQKLIVLEPKNPANYVLLSNIYGDLGRWKDVARLKI 587
Query: 561 LMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKELHIKLLEAGY 614
LM D K PG S +E++ SV F + D H S +I LK L L GY
Sbjct: 588 LMRDTGSKKLPGCSLIEVNDSVVEFYSLDERHSQSKEIYGVLKGLMKLLRSFGY 641
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 123/455 (27%), Positives = 213/455 (46%), Gaps = 40/455 (8%)
Query: 3 RNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQ 62
R +N + E + + M V N FTFPLVLK+CA I + +G+ +H V+K G +
Sbjct: 138 RGYFHNAFYREVVFLFGKMKSMDVRPNCFTFPLVLKSCAKIGAFVEGEEIHCEVIKGGLE 197
Query: 63 QDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAH---SRACLNDEAIL 119
+ FV T LID+YS S+ K+ M R++V+W S+IS + +R L
Sbjct: 198 GNQFVATTLIDVYSGGRAIGSAYKLFVGM--LERNIVAWTSMISGYILCNRVALARRLFD 255
Query: 120 VLKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGLLNNEIPLA-----NSVMSM 174
+ E V+ + S ++ + + R+ L + +P N++++
Sbjct: 256 LAPERDVVLWNIMVSGYIEIGDMKAARK-------------LFDTMPYRDTMSWNTMLNG 302
Query: 175 YAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRM----SVTPD 230
YA G V +F+E+ E ++ SW +IGGY + G F + +RM V P+
Sbjct: 303 YANNGDVEACEQLFEEMPERNVFSWNGLIGGYAHNGCF---FEVLRCFKRMLIDGLVVPN 359
Query: 231 LVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFD 290
+ ++ CA++G L L +H G+ + N L+ MY+KCG +E A VF+
Sbjct: 360 DATLVTVLSACARLGALDLGKWVHVYAATIGFKGSIYVGNALIDMYSKCGLIENAMEVFE 419
Query: 291 AVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSK 350
++ K + W SMI G A G ++A+ LF ++ +P+ T L +C LG + +
Sbjct: 420 SMDLKDLITWNSMICGLATHGCGADALTLFHQMKINGEKPDGITFIGVLCSCTHLGLVEE 479
Query: 351 GKE-----IEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVP-DKDLAVWSAM 404
G + EY + +E ++ +F + G +++A E +R+P + D +W+A+
Sbjct: 480 GTSYFNSMVNEYSIAPQIEH----YGCMVDLFGRAGLLDRAIEFVKRMPMEADAVIWAAL 535
Query: 405 INGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTS 439
+ I+ D A K+ +E P V S
Sbjct: 536 LGACRIYKNIDLAELALQKLIVLEPKNPANYVLLS 570
>gi|449531466|ref|XP_004172707.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like, partial [Cucumis sativus]
Length = 610
Score = 336 bits (861), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 199/594 (33%), Positives = 320/594 (53%), Gaps = 34/594 (5%)
Query: 33 FPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMP 92
F +L++C + + ++V + ++ GFQ + +V ++ + +R + D P
Sbjct: 28 FISLLRSCKTVALL---QKVQAQIITHGFQYNGYVAPNVVTSWVGLKQMAHARHLFDHFP 84
Query: 93 VRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCS----FRQG 148
V WN+I + E + + +M + + + TF V+ C+ F +G
Sbjct: 85 DP--KVELWNAISRGYFHNAFYREVVFLFGKMKSMDVRPNCFTFPLVLKSCAKIGAFVEG 142
Query: 149 ISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVN 208
+HC V K GL N+ +A +++ +Y+ + A +F + E +IV+WT++I GY+
Sbjct: 143 EEIHCEVIKGGLEGNQF-VATTLIDVYSGGRAIGSAYKLFVGMLERNIVAWTSMISGYI- 200
Query: 209 VGNVNEAFGLCNQM----RRMSVTP--DLVVFLNLILGCAQVGNLFLALSMHSLLLKSGY 262
LCN++ R + P D+V++ ++ G ++G++ A + +
Sbjct: 201 ---------LCNRVALARRLFDLAPERDVVLWNIMVSGYIEIGDMKAARKLFDTM----- 246
Query: 263 NNEDPLD-NLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFK 321
D + N +++ Y GD+E ++F+ + E++VF W +IGGYA G E + FK
Sbjct: 247 PYRDTMSWNTMLNGYANNGDVEACEQLFEEMPERNVFSWNGLIGGYAHNGCFFEVLRCFK 306
Query: 322 RLLKTS-VRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKC 380
R+L V PN+ATL T LSACA LG+L GK + Y G + + V +LI M+SKC
Sbjct: 307 RMLIDGLVVPNDATLVTVLSACARLGALDLGKWVHVYAATIGFKGSIYVGNALIDMYSKC 366
Query: 381 GRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSI 440
G I A EVFE + KDL W++MI G A HG G AL LF++M+ + G KPD + + +
Sbjct: 367 GLIENAMEVFESMDLKDLITWNSMICGLATHGCGADALTLFHQMK-INGEKPDGITFIGV 425
Query: 441 LSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEV 500
L +C+H G+V++G S+F SM + + I P IEHY C+VDL GRAG D A++ + MP+E
Sbjct: 426 LCSCTHLGLVEEGTSYFNSMVNEYSIAPQIEHYGCMVDLFGRAGLLDRAIEFVKRMPMEA 485
Query: 501 QAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARG 560
A +WA LL AC + N++L E A + L+ L P + NY+L++N++ G WK+ A +
Sbjct: 486 DAVIWAALLGACRIYKNIDLAELALQKLIVLEPKNPANYVLLSNIYGDLGRWKDVARLKI 545
Query: 561 LMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKELHIKLLEAGY 614
LM D K PG S +E++ SV F + D H S +I LK L L GY
Sbjct: 546 LMRDTGSKKLPGCSLIEVNDSVVEFYSLDERHSQSKEIYGVLKGLMKLLRSFGY 599
Score = 164 bits (416), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 123/455 (27%), Positives = 213/455 (46%), Gaps = 40/455 (8%)
Query: 3 RNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQ 62
R +N + E + + M V N FTFPLVLK+CA I + +G+ +H V+K G +
Sbjct: 96 RGYFHNAFYREVVFLFGKMKSMDVRPNCFTFPLVLKSCAKIGAFVEGEEIHCEVIKGGLE 155
Query: 63 QDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAH---SRACLNDEAIL 119
+ FV T LID+YS S+ K+ M R++V+W S+IS + +R L
Sbjct: 156 GNQFVATTLIDVYSGGRAIGSAYKLFVGM--LERNIVAWTSMISGYILCNRVALARRLFD 213
Query: 120 VLKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGLLNNEIPLA-----NSVMSM 174
+ E V+ + S ++ + + R+ L + +P N++++
Sbjct: 214 LAPERDVVLWNIMVSGYIEIGDMKAARK-------------LFDTMPYRDTMSWNTMLNG 260
Query: 175 YAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRM----SVTPD 230
YA G V +F+E+ E ++ SW +IGGY + G F + +RM V P+
Sbjct: 261 YANNGDVEACEQLFEEMPERNVFSWNGLIGGYAHNGCF---FEVLRCFKRMLIDGLVVPN 317
Query: 231 LVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFD 290
+ ++ CA++G L L +H G+ + N L+ MY+KCG +E A VF+
Sbjct: 318 DATLVTVLSACARLGALDLGKWVHVYAATIGFKGSIYVGNALIDMYSKCGLIENAMEVFE 377
Query: 291 AVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSK 350
++ K + W SMI G A G ++A+ LF ++ +P+ T L +C LG + +
Sbjct: 378 SMDLKDLITWNSMICGLATHGCGADALTLFHQMKINGEKPDGITFIGVLCSCTHLGLVEE 437
Query: 351 GKE-----IEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVP-DKDLAVWSAM 404
G + EY + +E ++ +F + G +++A E +R+P + D +W+A+
Sbjct: 438 GTSYFNSMVNEYSIAPQIEH----YGCMVDLFGRAGLLDRAIEFVKRMPMEADAVIWAAL 493
Query: 405 INGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTS 439
+ I+ D A K+ +E P V S
Sbjct: 494 LGACRIYKNIDLAELALQKLIVLEPKNPANYVLLS 528
>gi|147804811|emb|CAN64701.1| hypothetical protein VITISV_037299 [Vitis vinifera]
Length = 1111
Score = 336 bits (861), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 181/576 (31%), Positives = 325/576 (56%), Gaps = 13/576 (2%)
Query: 8 NGSFEETLSTYSSMLQTGVHGNSFTFPLV---LKACANINSIWDGKRVHSHVLKVGFQQD 64
NG + L M + G G F + +AC N+ ++ +G+ +H V+K G
Sbjct: 542 NGESKMGLECLCEMHRIGGDGERPNFRTLEGGFQACGNLGALLEGRCLHGLVVKTGMDYS 601
Query: 65 AFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEM 124
VQ+ L+ MYSKC + + + E V + ++SW S+ISA+SR E I + EM
Sbjct: 602 QVVQSSLLSMYSKCGNPEEAHRSFCE--VLNKDIISWTSMISAYSRMGWATECIDMFWEM 659
Query: 125 WVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGK 180
V G+ ++S S + + H + + +++ + N+++SMY KFG
Sbjct: 660 LVSGIYPDGIVISCMLSSFSNSMRVFEAKAFHGLIIRRHYTLDQM-VQNALLSMYCKFGF 718
Query: 181 VNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILG 240
+ A F + E + +W ++ GY +G + + GL +M+ + + D ++++
Sbjct: 719 LKLAEKFFGRVNEQNFEAWNLMVSGYGKIGLIMKCIGLFREMQCLGIESDSNSLVSVVSS 778
Query: 241 CAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLW 300
C+Q+G LA S+H ++K+ + ++N L+ MY K G+L +ARR+F + + + W
Sbjct: 779 CSQLGATHLARSIHCYMIKNLMDENVSVNNSLIDMYGKSGNLTIARRIF-CRIPRDIVTW 837
Query: 301 TSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVL 360
++I YA G+ +EA++L+ +++ ++PN ATL LSAC+ L SL +G+++ YI
Sbjct: 838 NTLISSYAHCGHFAEALSLYDKMVLEDLKPNSATLVXVLSACSHLASLEEGEKVHNYING 897
Query: 361 NGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNL 420
E N + T+LI M++KCG++ K++E+F + ++D+ W+ MI+GY +HG A+
Sbjct: 898 GKFEFNLSIATALIDMYAKCGQLEKSREIFNSMHERDVITWNVMISGYGMHGDARSAIEX 957
Query: 421 FYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLL 480
F +M+ KP+ + + ++LSAC+H+G+V +G F MQ ++ + P+++HY C+VDLL
Sbjct: 958 FQQMEESSA-KPNGLTFLAVLSACAHAGLVKEGKYLFGKMQ-DYSVAPNLKHYACMVDLL 1015
Query: 481 GRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYI 540
GR+G A + MP+ VW LLS+C H+ +E+G AK+ + + + G Y+
Sbjct: 1016 GRSGNLQEAEALVLSMPISPDGGVWGALLSSCKIHNEIEMGIRIAKHAIXSDVENDGYYV 1075
Query: 541 LMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQV 576
+++N+++S G W+EA ARG+M +R + K+ GWS V
Sbjct: 1076 MISNMYSSIGKWEEAEKARGIMKERGVRKKTGWSAV 1111
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 72/301 (23%), Positives = 132/301 (43%), Gaps = 42/301 (13%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+I + + G F E LS Y M+ + NS T VL AC+++ S+ +G++VH+++
Sbjct: 840 LISSYAHCGHFAEALSLYDKMVLEDLKPNSATLVXVLSACSHLASLEEGEKVHNYINGGK 899
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F+ + + T LIDMY+KC SR++ + M R V++WN +IS + AI
Sbjct: 900 FEFNLSIATALIDMYAKCGQLEKSREIFNSM--HERDVITWNVMISGYGMHGDARSAIEX 957
Query: 121 LKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGK 180
++M + + TF++V+S C A G
Sbjct: 958 FQQMEESSAKPNGLTFLAVLSAC--------------------------------AHAGL 985
Query: 181 VNEARSIFDEIGETSIVS----WTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
V E + +F ++ + S+ + ++ GN+ EA L + M ++PD V+
Sbjct: 986 VKEGKYLFGKMQDYSVAPNLKHYACMVDLLGRSGNLQEAEAL---VLSMPISPDGGVWGA 1042
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
L+ C + + + + + S N D ++ +MY+ G E A + + E+
Sbjct: 1043 LLSSCKIHNEIEMGIRIAKHAIXSDVEN-DGYYVMISNMYSSIGKWEEAEKARGIMKERG 1101
Query: 297 V 297
V
Sbjct: 1102 V 1102
>gi|297804022|ref|XP_002869895.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297315731|gb|EFH46154.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 853
Score = 336 bits (861), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 191/621 (30%), Positives = 336/621 (54%), Gaps = 7/621 (1%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
M+ G+ + + +S M + N+ TF VL CA+ I G ++H V+ G
Sbjct: 206 MLNGYAKCGASDSVIKGFSLMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSG 265
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+ ++ L+ MYSKC F + K+ M V+WN +IS + ++ L +E+++
Sbjct: 266 LDFEGSIKNSLLSMYSKCGRFDDAIKLFRMM--SRADTVTWNCMISGYVQSGLMEESLIF 323
Query: 121 LKEMWVLGLELSASTFVSVVSGCSFRQGI----SMHCCVYKLGLLNNEIPLANSVMSMYA 176
EM G+ A TF S++ S + + +HC + + + + +I L ++++ Y
Sbjct: 324 FYEMISSGVLPDAITFSSLLPSVSKFENLEYCRQIHCYIMRHSI-SLDIFLTSALIDAYF 382
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K V+ A+ IF + +V +T +I GY++ G +A + + ++ ++P+ + ++
Sbjct: 383 KCRGVSMAQKIFSQCNSVDVVVFTAMISGYLHNGLNIDALEMFRWLVKVKISPNEITLVS 442
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
++ + L L +H ++K G++N + ++ MY KCG + LA +F + ++
Sbjct: 443 ILPVIGGLLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFGRLSKRD 502
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEE 356
+ W SMI AQ PS A+++F+++ + + + +++ LSACA L S S GK I
Sbjct: 503 IVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICFDCVSISAALSACANLPSESFGKAIHG 562
Query: 357 YIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQ 416
+++ + L + +++LI M++KCG + A VF+ + +K++ W+++I Y HG
Sbjct: 563 FMIKHSLALDVYSESTLIDMYAKCGNLKAAMNVFDTMKEKNIVSWNSIIAAYGNHGKLKD 622
Query: 417 ALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCL 476
+L LF++M G +PD + + I+S C H G VD+G+ FF+SM ++GI+P EHY C+
Sbjct: 623 SLCLFHEMVEKSGNRPDQITFLEIISLCCHVGDVDEGVRFFRSMTQDYGIQPQQEHYACV 682
Query: 477 VDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGST 536
VDL GRAGR A +T+ MP A VW LL A H NVEL + A+ L+ L+P ++
Sbjct: 683 VDLFGRAGRLSEAYETVKSMPFPPDAGVWGTLLGASRLHKNVELAKVASSRLMDLDPWNS 742
Query: 537 GNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSV 596
G Y+L++N + G W+ R LM +R + K PG+S +EI+ +FV+GD +H S
Sbjct: 743 GYYVLISNAHANTGEWESVTKVRSLMKEREVQKIPGYSWIEINKITHLFVSGDVNHPESS 802
Query: 597 DIRKTLKELHIKLLEAGYIAE 617
I L L +L GYI +
Sbjct: 803 HIYSLLNSLLEELRLEGYIPQ 823
Score = 193 bits (490), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 139/515 (26%), Positives = 253/515 (49%), Gaps = 18/515 (3%)
Query: 9 GSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQ 68
G + L+ Y ML GV + TFP ++KAC + + + + V +G + FV
Sbjct: 113 GLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGIEFLSDTVSSLGMDCNEFVA 172
Query: 69 TGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLG 128
+ LI Y + + K+ D V + V WN +++ +++ +D I M +
Sbjct: 173 SSLIKAYLEYGKIDVAGKLFDR--VLQKDCVIWNVMLNGYAKCGASDSVIKGFSLMRMDQ 230
Query: 129 LELSASTFVSVVSGCSFR----QGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEA 184
+ +A TF V+S C+ + G+ +H V G L+ E + NS++SMY+K G+ ++A
Sbjct: 231 ISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSG-LDFEGSIKNSLLSMYSKCGRFDDA 289
Query: 185 RSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQV 244
+F + V+W +I GYV G + E+ +M V PD + F +L+ ++
Sbjct: 290 IKLFRMMSRADTVTWNCMISGYVQSGLMEESLIFFYEMISSGVLPDAITFSSLLPSVSKF 349
Query: 245 GNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMI 304
NL +H +++ + + L + L+ Y KC + +A+++F V ++T+MI
Sbjct: 350 ENLEYCRQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQKIFSQCNSVDVVVFTAMI 409
Query: 305 GGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLE 364
GY G +A+ +F+ L+K + PNE TL + L L +L G+E+ +I+ G +
Sbjct: 410 SGYLHNGLNIDALEMFRWLVKVKISPNEITLVSILPVIGGLLALKLGRELHGFIIKKGFD 469
Query: 365 SNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKM 424
+ + ++I M++KCGR+N A E+F R+ +D+ W++MI A A+++F +M
Sbjct: 470 NRCNIGCAVIDMYAKCGRMNLAYEIFGRLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQM 529
Query: 425 QHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYL----CLVDLL 480
V G+ D V ++ LSAC++ SF K++ F I+ S+ + L+D+
Sbjct: 530 G-VSGICFDCVSISAALSACANL----PSESFGKAIH-GFMIKHSLALDVYSESTLIDMY 583
Query: 481 GRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKH 515
+ G A+ M E W +++A H
Sbjct: 584 AKCGNLKAAMNVFDTMK-EKNIVSWNSIIAAYGNH 617
Score = 191 bits (486), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 127/498 (25%), Positives = 243/498 (48%), Gaps = 30/498 (6%)
Query: 35 LVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVR 94
L+L+ C+N+ + GK+VH+ V+ D++ ++ MY+ C F + K+ + R
Sbjct: 36 LLLQDCSNLTLLRQGKQVHAFVIVNRISGDSYTDERILGMYAMCGSFSNCGKMFYRLDSR 95
Query: 95 LRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGC----SFRQGIS 150
L S+ WNSIIS+ R L ++A+ +M G+ STF +V C +F+
Sbjct: 96 LSSIRPWNSIISSFVRMGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGIEF 155
Query: 151 MHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVG 210
+ V LG+ NE +A+S++ Y ++GK++ A +FD + + V W ++ GY G
Sbjct: 156 LSDTVSSLGMDCNEF-VASSLIKAYLEYGKIDVAGKLFDRVLQKDCVIWNVMLNGYAKCG 214
Query: 211 NVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDN 270
+ + MR ++P+ V F ++ CA + L + +H L++ SG + E + N
Sbjct: 215 ASDSVIKGFSLMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGLDFEGSIKN 274
Query: 271 LLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRP 330
L+SMY+KCG + A ++F + W MI GY Q G E++ F ++ + V P
Sbjct: 275 SLLSMYSKCGRFDDAIKLFRMMSRADTVTWNCMISGYVQSGLMEESLIFFYEMISSGVLP 334
Query: 331 NEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVF 390
+ T ++ L + ++ +L ++I YI+ + + + + ++LI + KC ++ A+++F
Sbjct: 335 DAITFSSLLPSVSKFENLEYCRQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQKIF 394
Query: 391 ERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACS----- 445
+ D+ V++AMI+GY +G+ AL +F + V+ + P+ + SIL
Sbjct: 395 SQCNSVDVVVFTAMISGYLHNGLNIDALEMFRWLVKVK-ISPNEITLVSILPVIGGLLAL 453
Query: 446 ------HSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVE 499
H ++ G + N G ++D+ + GR +LA + + +
Sbjct: 454 KLGRELHGFIIKKGF----DNRCNIGCA--------VIDMYAKCGRMNLAYEIFGRLS-K 500
Query: 500 VQAQVWAPLLSACMKHHN 517
W +++ C + N
Sbjct: 501 RDIVSWNSMITRCAQSDN 518
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/197 (22%), Positives = 92/197 (46%), Gaps = 9/197 (4%)
Query: 324 LKTSVRPNEATLATTLSA----CAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSK 379
L+ S R E TL LS C+ L L +GK++ ++++N + + ++ M++
Sbjct: 19 LRNSYRFLEETLPRRLSLLLQDCSNLTLLRQGKQVHAFVIVNRISGDSYTDERILGMYAM 78
Query: 380 CGRINKAKEVFERVPDK--DLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVY 437
CG + ++F R+ + + W+++I+ + G+ +QAL ++KM G+ PD +
Sbjct: 79 CGSFSNCGKMFYRLDSRLSSIRPWNSIISSFVRMGLLNQALAFYFKMLCF-GVSPDVSTF 137
Query: 438 TSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMP 497
++ AC G+ F S+ G++ + L+ G+ D+A K +
Sbjct: 138 PCLVKACVALKNF-KGIEFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVAGKLFDRV- 195
Query: 498 VEVQAQVWAPLLSACMK 514
++ +W +L+ K
Sbjct: 196 LQKDCVIWNVMLNGYAK 212
>gi|125561353|gb|EAZ06801.1| hypothetical protein OsI_29045 [Oryza sativa Indica Group]
Length = 696
Score = 336 bits (861), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 195/607 (32%), Positives = 323/607 (53%), Gaps = 13/607 (2%)
Query: 8 NGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFV 67
+G+ E +M G+ N+F L++ A G ++ S LK G + F
Sbjct: 71 SGAHPEAWRLLRAMHAQGLASNTFALGSALRSAAVARRPAIGAQLQSLALKSGLANNVFA 130
Query: 68 QTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVL 127
+ L+D+Y+KC +R+V D MP R + VSWN++I+ ++ + A+ + EM
Sbjct: 131 ASALLDVYAKCGRVRDARQVFDGMPER--NTVSWNALIAGYTESGDMASALELFLEMERE 188
Query: 128 GLELSASTFVSVVSGCSFRQGISMHCCVYKLGLLNNEIPLA--NSVMSMYAKFGKVNEAR 185
GL +TF S+++ MH K+ + + L N+ ++ Y++ G + ++R
Sbjct: 189 GLVPDEATFASLLTAVEGPSCFLMHQLHGKIVKYGSALGLTVLNAAITAYSQCGSLKDSR 248
Query: 186 SIFDEIGET-SIVSWTTIIGGYVNVGNVNEAFGL-CNQMRRMSVTPDLVVFLNLILGCAQ 243
IFD IG+ ++SW ++G Y + G +EA M+ V PD+ F ++I C++
Sbjct: 249 RIFDGIGDIRDLISWNAMLGAYTHNGMDDEAMKFFVRMMQESGVHPDMYSFTSIISSCSE 308
Query: 244 VG-NLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGD---LELARRVFDAVLEKSVFL 299
G + +H L++KS P+ N L++MYT+ + +E A + F++++ K
Sbjct: 309 HGHDDHQGRVIHGLVIKSALEGVTPVCNALIAMYTRYNENCMMEDAYKCFNSLVLKDTVS 368
Query: 300 WTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIV 359
W SM+ GY+Q G ++A+ F+ + +VR +E + L + +EL L GK+I ++
Sbjct: 369 WNSMLTGYSQHGLSADALKFFRCMCSENVRTDEYAFSAALRSSSELAVLQLGKQIHGLVI 428
Query: 360 LNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALN 419
+G SN V +SLI M+SK G I+ A++ FE W+AMI GYA HG +
Sbjct: 429 HSGFASNDFVSSSLIFMYSKSGIIDDARKSFEEADKSSSVPWNAMIFGYAQHGQAENVDI 488
Query: 420 LFYKMQHVEGLKP-DAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVD 478
LF +M ++ P D + + ++++CSH+G+VD+G +M++ +G+ +EHY C VD
Sbjct: 489 LFNEM--LQRKAPLDHITFVGLITSCSHAGLVDEGSEILNTMETKYGVPLRMEHYACGVD 546
Query: 479 LLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGN 538
L GRAG+ D A K I MP E A VW LL AC H NVEL A +L P
Sbjct: 547 LYGRAGQLDKAKKLIDSMPFEPDAMVWMTLLGACRIHGNVELASDVASHLFVAEPRQHST 606
Query: 539 YILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDI 598
Y+L++++++ GMW + AT + +M R L+K PGWS +E+ V F A D+SH +I
Sbjct: 607 YVLLSSMYSGLGMWSDRATVQRVMKKRGLSKVPGWSLIEVKNEVHSFNAEDKSHPKMDEI 666
Query: 599 RKTLKEL 605
+ L+ L
Sbjct: 667 YEMLRVL 673
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 131/464 (28%), Positives = 234/464 (50%), Gaps = 33/464 (7%)
Query: 51 RVHSHVLKVGFQQDAFVQTGLIDMYSKCSD--FVSSRKVLDEMPVRLRSVVSWNSIISAH 108
R H+ +LK GF L+ YS+ S ++R+V DE+P R VSWN++++AH
Sbjct: 12 RSHASLLKSGFAAPT-PWNQLLTAYSRSSPDGLAAARRVFDEVP--RRDEVSWNALLAAH 68
Query: 109 SRACLNDEAILVLKEMWVLGLELSASTFV---SVVSGCSFRQ---GISMHCCVYKLGLLN 162
+ + + EA +L+ M G L+++TF ++ S R+ G + K GL N
Sbjct: 69 AASGAHPEAWRLLRAMHAQG--LASNTFALGSALRSAAVARRPAIGAQLQSLALKSGLAN 126
Query: 163 NEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQM 222
N + A++++ +YAK G+V +AR +FD + E + VSW +I GY G++ A L +M
Sbjct: 127 N-VFAASALLDVYAKCGRVRDARQVFDGMPERNTVSWNALIAGYTESGDMASALELFLEM 185
Query: 223 RRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDL 282
R + PD F +L L + + FL +H ++K G + N ++ Y++CG L
Sbjct: 186 EREGLVPDEATFASL-LTAVEGPSCFLMHQLHGKIVKYGSALGLTVLNAAITAYSQCGSL 244
Query: 283 ELARRVFDAVLE-KSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTS-VRPNEATLATTLS 340
+ +RR+FD + + + + W +M+G Y G EA+ F R+++ S V P+ + + +S
Sbjct: 245 KDSRRIFDGIGDIRDLISWNAMLGAYTHNGMDDEAMKFFVRMMQESGVHPDMYSFTSIIS 304
Query: 341 ACAELG-SLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGR---INKAKEVFERVPDK 396
+C+E G +G+ I ++ + LE V +LI M+++ + A + F + K
Sbjct: 305 SCSEHGHDDHQGRVIHGLVIKSALEGVTPVCNALIAMYTRYNENCMMEDAYKCFNSLVLK 364
Query: 397 DLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVD----- 451
D W++M+ GY+ HG+ AL F++ E ++ D +++ L + S ++
Sbjct: 365 DTVSWNSMLTGYSQHGLSADALK-FFRCMCSENVRTDEYAFSAALRSSSELAVLQLGKQI 423
Query: 452 DGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHE 495
GL SN + S L+ + ++G D A K+ E
Sbjct: 424 HGLVIHSGFASNDFVSSS------LIFMYSKSGIIDDARKSFEE 461
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/227 (22%), Positives = 100/227 (44%), Gaps = 7/227 (3%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
M+ + +G + L + M V + + F L++ + + + GK++H V+ G
Sbjct: 372 MLTGYSQHGLSADALKFFRCMCSENVRTDEYAFSAALRSSSELAVLQLGKQIHGLVIHSG 431
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F + FV + LI MYSK +RK +E S V WN++I +++ + ++
Sbjct: 432 FASNDFVSSSLIFMYSKSGIIDDARKSFEE--ADKSSSVPWNAMIFGYAQHGQAENVDIL 489
Query: 121 LKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGLLNNEIPLANSV----MSMYA 176
EM L TFV +++ CS + + +PL + +Y
Sbjct: 490 FNEMLQRKAPLDHITFVGLITSCSHAGLVDEGSEILNTMETKYGVPLRMEHYACGVDLYG 549
Query: 177 KFGKVNEARSIFDEIG-ETSIVSWTTIIGGYVNVGNVNEAFGLCNQM 222
+ G++++A+ + D + E + W T++G GNV A + + +
Sbjct: 550 RAGQLDKAKKLIDSMPFEPDAMVWMTLLGACRIHGNVELASDVASHL 596
>gi|242076234|ref|XP_002448053.1| hypothetical protein SORBIDRAFT_06g020256 [Sorghum bicolor]
gi|241939236|gb|EES12381.1| hypothetical protein SORBIDRAFT_06g020256 [Sorghum bicolor]
Length = 693
Score = 336 bits (861), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 179/473 (37%), Positives = 266/473 (56%), Gaps = 2/473 (0%)
Query: 143 CSFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTI 202
C+ G + K GL+ + L +S++ MYA V A+ +FD + E +V W I
Sbjct: 133 CTLDVGRGIQAYAVKRGLMADRFVL-SSLIHMYASCRDVAAAQLLFDAVEENGVVMWNAI 191
Query: 203 IGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGY 262
I Y+ GN E + M + V D + ++++ C ++G+ L + + + G
Sbjct: 192 ITAYMKNGNWMEVVEMFKGMLEVGVAFDEITLVSVVTACGRIGDAKLGKWVAEYVDEKGL 251
Query: 263 NNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKR 322
L L+ MY KCG+L ARR+FD + + V W++MI GY Q EA+ LF
Sbjct: 252 VRNRNLMTALIDMYAKCGELGKARRLFDGMQSRDVVAWSAMISGYTQADQCREALALFSE 311
Query: 323 LLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGR 382
+ V PN+ T+ + LSACA LG+L GK + YI L + T+L+ ++KCG
Sbjct: 312 MQLAEVEPNDVTMVSVLSACAVLGALETGKWVHSYIRRKRLSLTIILGTALVDFYAKCGC 371
Query: 383 INKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILS 442
I+ A E FE +P K+ W+A+I G A +G G +AL LF M+ ++P V + +L
Sbjct: 372 IDDAVEAFESMPVKNSWTWTALIKGMATNGRGREALELFSSMRKA-SIEPTDVTFIGVLM 430
Query: 443 ACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQA 502
ACSHS +V++G F SM ++GI+P EHY C+VDLLGRAG D A + I MP+E A
Sbjct: 431 ACSHSCLVEEGRRHFDSMTQDYGIKPRAEHYGCVVDLLGRAGLIDEAYQFIRTMPIEPNA 490
Query: 503 QVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLM 562
+W LLS+C H NVE+GE A K +++LNP +G+YIL++N++ S G WK AA R M
Sbjct: 491 VIWRALLSSCAVHKNVEIGEEALKQIVSLNPSHSGDYILLSNIYASVGQWKNAAMIRKEM 550
Query: 563 DDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKELHIKLLEAGYI 615
DR + K PG S +E+DG V F A D H +I + ++E+ ++ AGYI
Sbjct: 551 KDRGIEKTPGCSLIELDGVVVEFFAEDSDHPQLKEIYQKVEEMIDRIKMAGYI 603
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 115/429 (26%), Positives = 216/429 (50%), Gaps = 13/429 (3%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTG-VHGNSFTFPLVLKACANINSIWDGKRVHSHVLKV 59
++R + G E+ L + ML V + T LK+C+ + ++ G+ + ++ +K
Sbjct: 89 LMRALLHAGHPEDALHLFVEMLDVASVCPDQHTVACALKSCSRMCTLDVGRGIQAYAVKR 148
Query: 60 GFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAIL 119
G D FV + LI MY+ C D +++ + D V VV WN+II+A+ + E +
Sbjct: 149 GLMADRFVLSSLIHMYASCRDVAAAQLLFDA--VEENGVVMWNAIITAYMKNGNWMEVVE 206
Query: 120 VLKEMWVLGLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMY 175
+ K M +G+ T VSVV+ C + G + V + GL+ N L +++ MY
Sbjct: 207 MFKGMLEVGVAFDEITLVSVVTACGRIGDAKLGKWVAEYVDEKGLVRNR-NLMTALIDMY 265
Query: 176 AKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFL 235
AK G++ +AR +FD + +V+W+ +I GY EA L ++M+ V P+ V +
Sbjct: 266 AKCGELGKARRLFDGMQSRDVVAWSAMISGYTQADQCREALALFSEMQLAEVEPNDVTMV 325
Query: 236 NLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEK 295
+++ CA +G L +HS + + + L LV Y KCG ++ A F+++ K
Sbjct: 326 SVLSACAVLGALETGKWVHSYIRRKRLSLTIILGTALVDFYAKCGCIDDAVEAFESMPVK 385
Query: 296 SVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIE 355
+ + WT++I G A G EA+ LF + K S+ P + T L AC+ + +G+
Sbjct: 386 NSWTWTALIKGMATNGRGREALELFSSMRKASIEPTDVTFIGVLMACSHSCLVEEGRRHF 445
Query: 356 EYIVLN-GLESNRQVQTSLIHMFSKCGRINKAKEVFERVP-DKDLAVWSAMINGYAIHG- 412
+ + + G++ + ++ + + G I++A + +P + + +W A+++ A+H
Sbjct: 446 DSMTQDYGIKPRAEHYGCVVDLLGRAGLIDEAYQFIRTMPIEPNAVIWRALLSSCAVHKN 505
Query: 413 --MGDQALN 419
+G++AL
Sbjct: 506 VEIGEEALK 514
Score = 152 bits (383), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 96/316 (30%), Positives = 164/316 (51%), Gaps = 4/316 (1%)
Query: 195 SIVSWTTIIGGYVNVGNVNEAFGLCNQMRRM-SVTPDLVVFLNLILGCAQVGNLFLALSM 253
S + ++ ++ G+ +A L +M + SV PD + C+++ L + +
Sbjct: 82 STPCYNVLMRALLHAGHPEDALHLFVEMLDVASVCPDQHTVACALKSCSRMCTLDVGRGI 141
Query: 254 HSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYP 313
+ +K G + + + L+ MY C D+ A+ +FDAV E V +W ++I Y + G
Sbjct: 142 QAYAVKRGLMADRFVLSSLIHMYASCRDVAAAQLLFDAVEENGVVMWNAIITAYMKNGNW 201
Query: 314 SEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSL 373
E V +FK +L+ V +E TL + ++AC +G GK + EY+ GL NR + T+L
Sbjct: 202 MEVVEMFKGMLEVGVAFDEITLVSVVTACGRIGDAKLGKWVAEYVDEKGLVRNRNLMTAL 261
Query: 374 IHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPD 433
I M++KCG + KA+ +F+ + +D+ WSAMI+GY +AL LF +MQ E ++P+
Sbjct: 262 IDMYAKCGELGKARRLFDGMQSRDVVAWSAMISGYTQADQCREALALFSEMQLAE-VEPN 320
Query: 434 AVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTI 493
V S+LSAC+ G ++ G + S + +I LVD + G D A++
Sbjct: 321 DVTMVSVLSACAVLGALETG-KWVHSYIRRKRLSLTIILGTALVDFYAKCGCIDDAVEAF 379
Query: 494 HEMPVEVQAQVWAPLL 509
MPV+ + W L+
Sbjct: 380 ESMPVK-NSWTWTALI 394
>gi|225440783|ref|XP_002275884.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g37570 [Vitis vinifera]
Length = 561
Score = 335 bits (860), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 185/551 (33%), Positives = 315/551 (57%), Gaps = 30/551 (5%)
Query: 36 VLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRL 95
+LKAC +++ ++VH+ +++ G QD F+ + + + + S+F + V + V
Sbjct: 31 LLKACTTTSTL---EQVHARIIRKGLHQDHFIISQFLTLCNSLSNFSYTTSVFNG--VSS 85
Query: 96 RSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCS----FRQGISM 151
S V WN+ I +S + + M T+ S++ CS ++G++
Sbjct: 86 PSTVLWNTYIKGYSENYSVSLTVSLFIRMKRSDAVPDKFTYPSLIKACSKVCGVKEGVAF 145
Query: 152 HCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGN 211
H + G+ ++ + S++ +Y K G++ AR +FDE+GE ++VSWT +I GY + +
Sbjct: 146 HGSAVRCGV-GGDVFVMTSLIDLYGKCGEILCARKVFDEMGERNVVSWTAMIAGYASFSD 204
Query: 212 VNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNL 271
+ EA L ++M + V + +I G + G+L A M +E P N+
Sbjct: 205 LVEARKLFDEMPE----KNAVSWNAIISGYVKCGDLRSARKMF---------DEMPHRNV 251
Query: 272 -----LVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKT 326
++ Y K GD+ AR VF+ E+ V W+++I GY Q G P+EAV +F +
Sbjct: 252 VSFTTMIDGYAKSGDMASARFVFEEAPERDVVAWSALISGYVQNGQPNEAVKIFLEMCSR 311
Query: 327 SVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNR-QVQTSLIHMFSKCGRINK 385
+V+P+E + + +SAC+++GSL K +++Y+ + ++ +R V +LI M +KCG +++
Sbjct: 312 NVKPDEFIMVSLMSACSQMGSLELAKWVDDYVRKSSIDVHRAHVIAALIDMNAKCGSMDR 371
Query: 386 AKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACS 445
A ++FE +P +DL + +M+ G +IHG G QA++LF +M + EGL PD V +T IL+ACS
Sbjct: 372 ATKLFEEMPKRDLISYCSMMQGLSIHGCGPQAVSLFSRMLN-EGLTPDDVAFTVILTACS 430
Query: 446 HSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVW 505
+G+VD+G +F+SM++++ I PS +HY C+VDLLGRAGR A + + MPVE A W
Sbjct: 431 RAGLVDEGCYYFESMKTDYSIVPSPDHYACMVDLLGRAGRLKEAYELLKSMPVEPHAGAW 490
Query: 506 APLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDR 565
LL AC H ++ELGE A L L P + GNY+L++N++ +A W + + R M +R
Sbjct: 491 GALLGACKLHCDIELGEVVADQLFELEPQNAGNYVLLSNIYAAAEQWLDVSLLRNKMRER 550
Query: 566 RLTKEPGWSQV 576
+ K PG S +
Sbjct: 551 GIRKIPGCSWI 561
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 116/422 (27%), Positives = 214/422 (50%), Gaps = 28/422 (6%)
Query: 2 IRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGF 61
I+ + N S T+S + M ++ + FT+P ++KAC+ + + +G H ++ G
Sbjct: 95 IKGYSENYSVSLTVSLFIRMKRSDAVPDKFTYPSLIKACSKVCGVKEGVAFHGSAVRCGV 154
Query: 62 QQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVL 121
D FV T LID+Y KC + + +RKV DEM R+VVSW ++I+ ++ EA +
Sbjct: 155 GGDVFVMTSLIDLYGKCGEILCARKVFDEMGE--RNVVSWTAMIAGYASFSDLVEARKLF 212
Query: 122 KEMWVLGLELSASTFVSVVSG---C-SFRQGISMHCCVYKLGLLNNEIPLANSV-----M 172
EM E +A ++ +++SG C R M +E+P N V +
Sbjct: 213 DEM----PEKNAVSWNAIISGYVKCGDLRSARKMF----------DEMPHRNVVSFTTMI 258
Query: 173 SMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLV 232
YAK G + AR +F+E E +V+W+ +I GYV G NEA + +M +V PD
Sbjct: 259 DGYAKSGDMASARFVFEEAPERDVVAWSALISGYVQNGQPNEAVKIFLEMCSRNVKPDEF 318
Query: 233 VFLNLILGCAQVGNLFLALSMHSLLLKSGYN-NEDPLDNLLVSMYTKCGDLELARRVFDA 291
+ ++L+ C+Q+G+L LA + + KS + + + L+ M KCG ++ A ++F+
Sbjct: 319 IMVSLMSACSQMGSLELAKWVDDYVRKSSIDVHRAHVIAALIDMNAKCGSMDRATKLFEE 378
Query: 292 VLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKG 351
+ ++ + + SM+ G + G +AV+LF R+L + P++ L+AC+ G + +G
Sbjct: 379 MPKRDLISYCSMMQGLSIHGCGPQAVSLFSRMLNEGLTPDDVAFTVILTACSRAGLVDEG 438
Query: 352 KEIEEYIVLN-GLESNRQVQTSLIHMFSKCGRINKAKEVFERVP-DKDLAVWSAMINGYA 409
E + + + + ++ + + GR+ +A E+ + +P + W A++
Sbjct: 439 CYYFESMKTDYSIVPSPDHYACMVDLLGRAGRLKEAYELLKSMPVEPHAGAWGALLGACK 498
Query: 410 IH 411
+H
Sbjct: 499 LH 500
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 89/212 (41%), Gaps = 10/212 (4%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+I NG E + + M V + F ++ AC+ + S+ K V +V K
Sbjct: 288 LISGYVQNGQPNEAVKIFLEMCSRNVKPDEFIMVSLMSACSQMGSLELAKWVDDYVRKSS 347
Query: 61 FQ-QDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAIL 119
A V LIDM +KC + K+ +EMP R ++S+ S++ S +A+
Sbjct: 348 IDVHRAHVIAALIDMNAKCGSMDRATKLFEEMPK--RDLISYCSMMQGLSIHGCGPQAVS 405
Query: 120 VLKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGLLNNE--IPLAN---SVMSM 174
+ M GL F +++ CS R G+ C Y + + +P + ++ +
Sbjct: 406 LFSRMLNEGLTPDDVAFTVILTACS-RAGLVDEGCYYFESMKTDYSIVPSPDHYACMVDL 464
Query: 175 YAKFGKVNEARSIFDEIG-ETSIVSWTTIIGG 205
+ G++ EA + + E +W ++G
Sbjct: 465 LGRAGRLKEAYELLKSMPVEPHAGAWGALLGA 496
>gi|302816284|ref|XP_002989821.1| hypothetical protein SELMODRAFT_130453 [Selaginella moellendorffii]
gi|300142387|gb|EFJ09088.1| hypothetical protein SELMODRAFT_130453 [Selaginella moellendorffii]
Length = 941
Score = 335 bits (860), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 192/626 (30%), Positives = 339/626 (54%), Gaps = 12/626 (1%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI + NG +EE L + M GV N T+ +++ C N++++ +G+ + + +L+
Sbjct: 231 MIAGCSQNGQYEEGLLVFRKMDLEGVKANEVTYMSMVEVCRNLDAVKEGEMIDARILESP 290
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F + T LI +Y +C ++ +L+ M R VV+WN++++A ++ N EAI +
Sbjct: 291 FCSSTLLATSLISLYGQCGILDRAKGLLEHM--YQRDVVAWNAMVTACAQNGDNWEAIHL 348
Query: 121 LKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
L+ M + G + T++SV+ C+ QG +H V GLL E+ + NSV++MY
Sbjct: 349 LRRMDMEGFGANKVTYLSVLEACANLEALSQGREIHARVLLCGLLQREVAVGNSVITMYG 408
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K G+ A S+F+ + VSW +I V +A L + M + + L+
Sbjct: 409 KCGQTEAAMSVFEAMPRKDDVSWNAVINASVGNSKFQDALELFHGMELEGLRSNEFTLLS 468
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYN-NEDPLDNLLVSMYTKCGDLELARRVFDAVLEK 295
L+ C + +L LA +H+ G+ N + N +V+MY +CG L A++ FD++ EK
Sbjct: 469 LLEACGGLEDLKLARQIHARAAAGGFGGNSTAVGNSVVNMYARCGSLLDAKKAFDSLEEK 528
Query: 296 SVFLWTSMIGGYAQL--GYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKE 353
+ W+ ++ YAQ G A F+ + ++P E T + L ACA + +L G+
Sbjct: 529 GLVAWSIILAAYAQSKDGPGRRAFKFFQEMEAEGIKPGEVTFVSALDACAAMATLEHGRS 588
Query: 354 IEEYIVLNG-LESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHG 412
+ +G +E++ + ++I+M+ KCG + AK VF+++P+K L W+++I YA +G
Sbjct: 589 MHRRAAASGFVETSLVLGNTIINMYGKCGSPSDAKLVFDQMPEKCLISWNSLIVAYAHNG 648
Query: 413 MGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEH 472
+AL+ +M ++G PD+ SIL SH+G+++ G+ F+S + G+EPS
Sbjct: 649 HALEALSSLQEML-LQGFDPDSGTSVSILYGLSHAGLLERGVEHFRSSIQDHGLEPSSGQ 707
Query: 473 YLCLVDLLGRAGRFDLALKTIHEMPV-EVQAQVWAPLLSACMKHHNVELGEYAAKNLLTL 531
CLVDLL R G D A + I P + W LL+AC + + + G A+ + L
Sbjct: 708 LKCLVDLLARKGFLDAAEELILASPACQADTIAWMTLLAACKSYGDPQRGIRCAERVFEL 767
Query: 532 NPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRS 591
P +G+++++ANL+ S G W +A+ R +M+ + KEPG S +E+ GSV F++G+
Sbjct: 768 EPQHSGSFVVLANLYASVGRWSDASRIRKMMERMSVKKEPGCSWIELSGSVHEFISGESK 827
Query: 592 HHLSVDIRKTLKELHIKLLEAGYIAE 617
H +I + L++L +++ EAGY+ +
Sbjct: 828 HPKIREICEDLEKLTLRMREAGYVPD 853
Score = 216 bits (551), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 132/449 (29%), Positives = 233/449 (51%), Gaps = 9/449 (2%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
M+ + NG + E L ++ M G + F + L ACA + G+++HS V+ G
Sbjct: 29 MMAAYSQNGHYREALELFTRMQWEGTRPDKVVFVIALDACAASGELDHGRQIHSSVVGSG 88
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+ + L++MY KC D + KV D M LR VVSW ++++ +++ +A+
Sbjct: 89 LTSNIIISNSLVNMYGKCQDVPCAEKVFDGM--LLRDVVSWTAMLAVYAQNGCWSQALEC 146
Query: 121 LKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
L M G++ + TFV++V C+ G +H + GL + I L N+++ MY
Sbjct: 147 LSRMDAEGVKPNQVTFVTIVDVCAKLRLLDLGRKIHHRIINEGLEPDGI-LGNALVHMYG 205
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
G ++ +S+F +G++S++ WTT+I G G E + +M V + V +++
Sbjct: 206 SCGSFDDMKSVFSRMGQSSVLLWTTMIAGCSQNGQYEEGLLVFRKMDLEGVKANEVTYMS 265
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
++ C + + + + +L+S + + L L+S+Y +CG L+ A+ + + + ++
Sbjct: 266 MVEVCRNLDAVKEGEMIDARILESPFCSSTLLATSLISLYGQCGILDRAKGLLEHMYQRD 325
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEE 356
V W +M+ AQ G EA++L +R+ N+ T + L ACA L +LS+G+EI
Sbjct: 326 VVAWNAMVTACAQNGDNWEAIHLLRRMDMEGFGANKVTYLSVLEACANLEALSQGREIHA 385
Query: 357 YIVLNG-LESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGD 415
++L G L+ V S+I M+ KCG+ A VFE +P KD W+A+IN +
Sbjct: 386 RVLLCGLLQREVAVGNSVITMYGKCGQTEAAMSVFEAMPRKDDVSWNAVINASVGNSKFQ 445
Query: 416 QALNLFYKMQHVEGLKPDAVVYTSILSAC 444
AL LF+ M+ +EGL+ + S+L AC
Sbjct: 446 DALELFHGME-LEGLRSNEFTLLSLLEAC 473
Score = 183 bits (464), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 110/343 (32%), Positives = 179/343 (52%), Gaps = 5/343 (1%)
Query: 174 MYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVV 233
MY K +V +A +FD I ++ SWT ++ Y G+ EA L +M+ PD VV
Sbjct: 1 MYGKCARVTDALMVFDGISAKNVFSWTMMMAAYSQNGHYREALELFTRMQWEGTRPDKVV 60
Query: 234 FLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVL 293
F+ + CA G L +HS ++ SG + + N LV+MY KC D+ A +VFD +L
Sbjct: 61 FVIALDACAASGELDHGRQIHSSVVGSGLTSNIIISNSLVNMYGKCQDVPCAEKVFDGML 120
Query: 294 EKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKE 353
+ V WT+M+ YAQ G S+A+ R+ V+PN+ T T + CA+L L G++
Sbjct: 121 LRDVVSWTAMLAVYAQNGCWSQALECLSRMDAEGVKPNQVTFVTIVDVCAKLRLLDLGRK 180
Query: 354 IEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGM 413
I I+ GLE + + +L+HM+ CG + K VF R+ + +W+ MI G + +G
Sbjct: 181 IHHRIINEGLEPDGILGNALVHMYGSCGSFDDMKSVFSRMGQSSVLLWTTMIAGCSQNGQ 240
Query: 414 GDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDG-LSFFKSMQSNFGIEPSIEH 472
++ L +F KM +EG+K + V Y S++ C + V +G + + ++S F S
Sbjct: 241 YEEGLLVFRKMD-LEGVKANEVTYMSMVEVCRNLDAVKEGEMIDARILESPFC--SSTLL 297
Query: 473 YLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKH 515
L+ L G+ G D A K + E + W +++AC ++
Sbjct: 298 ATSLISLYGQCGILDRA-KGLLEHMYQRDVVAWNAMVTACAQN 339
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 116/428 (27%), Positives = 213/428 (49%), Gaps = 8/428 (1%)
Query: 74 MYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSA 133
MY KC+ + V D + ++V SW +++A+S+ EA+ + M G
Sbjct: 1 MYGKCARVTDALMVFD--GISAKNVFSWTMMMAAYSQNGHYREALELFTRMQWEGTRPDK 58
Query: 134 STFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFD 189
FV + C+ G +H V GL +N I ++NS+++MY K V A +FD
Sbjct: 59 VVFVIALDACAASGELDHGRQIHSSVVGSGLTSN-IIISNSLVNMYGKCQDVPCAEKVFD 117
Query: 190 EIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFL 249
+ +VSWT ++ Y G ++A ++M V P+ V F+ ++ CA++ L L
Sbjct: 118 GMLLRDVVSWTAMLAVYAQNGCWSQALECLSRMDAEGVKPNQVTFVTIVDVCAKLRLLDL 177
Query: 250 ALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQ 309
+H ++ G + L N LV MY CG + + VF + + SV LWT+MI G +Q
Sbjct: 178 GRKIHHRIINEGLEPDGILGNALVHMYGSCGSFDDMKSVFSRMGQSSVLLWTTMIAGCSQ 237
Query: 310 LGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQV 369
G E + +F+++ V+ NE T + + C L ++ +G+ I+ I+ + S+ +
Sbjct: 238 NGQYEEGLLVFRKMDLEGVKANEVTYMSMVEVCRNLDAVKEGEMIDARILESPFCSSTLL 297
Query: 370 QTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEG 429
TSLI ++ +CG +++AK + E + +D+ W+AM+ A +G +A++L +M +EG
Sbjct: 298 ATSLISLYGQCGILDRAKGLLEHMYQRDVVAWNAMVTACAQNGDNWEAIHLLRRMD-MEG 356
Query: 430 LKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLA 489
+ V Y S+L AC++ + G + ++ + ++ + G+ G+ + A
Sbjct: 357 FGANKVTYLSVLEACANLEALSQGREIHARVLLCGLLQREVAVGNSVITMYGKCGQTEAA 416
Query: 490 LKTIHEMP 497
+ MP
Sbjct: 417 MSVFEAMP 424
>gi|242050732|ref|XP_002463110.1| hypothetical protein SORBIDRAFT_02g037960 [Sorghum bicolor]
gi|241926487|gb|EER99631.1| hypothetical protein SORBIDRAFT_02g037960 [Sorghum bicolor]
Length = 802
Score = 335 bits (860), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 200/629 (31%), Positives = 314/629 (49%), Gaps = 78/629 (12%)
Query: 69 TGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLG 128
T L+ Y+ ++ D +P R V N++ISA++RA A+ V + + G
Sbjct: 92 TSLVAAYAAAGRLPAAVSFFDAVPQARRDTVLHNAVISAYARASHAAPAVAVFRSLLASG 151
Query: 129 -LELSASTFVSVVSGC------SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKF--- 178
L +F +++S S R + C V K G + ++N+++++Y K
Sbjct: 152 SLRPDDYSFTALLSAAGHLPNISVRHCAQLQCSVLKSGA-GGVLSVSNALVALYMKCEAL 210
Query: 179 -------------------------------GKVNEARSIFDEIGETSIVSWTTIIGGYV 207
G V ARS+F+E+ V W +I GYV
Sbjct: 211 EATRDARKVLDEMPDKDALTWTTMVVGYVRRGDVGAARSVFEEVDVKFDVVWNAMISGYV 270
Query: 208 NVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLL--LKSGYNNE 265
+ G V EAF L +M V D F +++ CA G S+H + L+ + E
Sbjct: 271 HSGMVVEAFELFRRMVLERVPLDEFTFTSVLSACANAGFFAHGKSVHGQITRLQPNFVPE 330
Query: 266 D--PLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTS--------------------- 302
P++N LV++Y+KCG++ +ARR+FD + K V W +
Sbjct: 331 AALPVNNALVTLYSKCGNIAVARRIFDNMKSKDVVSWNTILSGYVESSCLDKAVEVFEEM 390
Query: 303 ----------MIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGK 352
M+ GY G+ +A+ LF R+ V+P + T A +SAC ELGSL GK
Sbjct: 391 PYKNELSWMVMVSGYVHGGFSEDALKLFNRMRAEDVKPCDYTYAGAISACGELGSLKHGK 450
Query: 353 EIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHG 412
++ ++V G E + +LI M+++CG + +A +F +P+ D W+AMI+ HG
Sbjct: 451 QLHGHLVQLGFEGSNSAGNALITMYARCGAVKEANLMFLVMPNIDSVSWNAMISALGQHG 510
Query: 413 MGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEH 472
G +AL LF +M EG+ PD + + ++L+AC+HSG+VD+G +F+SM+ +FGI P +H
Sbjct: 511 HGREALELFDRMV-AEGIYPDRISFLTVLTACNHSGLVDEGFQYFESMKRDFGIIPGEDH 569
Query: 473 YLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLN 532
Y L+DLLGRAGR A I MP E +W +LS C ++ELG +AA L +
Sbjct: 570 YTRLIDLLGRAGRIGEARDLIKTMPFEPTPSIWEAILSGCRTSGDMELGAHAADQLFKMT 629
Query: 533 PGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSH 592
P G YIL++N +++AG W +AA R LM DR + KEPG S +E V VFV GD H
Sbjct: 630 PQHDGTYILLSNTYSAAGRWVDAARVRKLMRDRGVKKEPGCSWIEAGNKVHVFVVGDTKH 689
Query: 593 HLSVDIRKTLKELHIKLLEAGYIAEADIV 621
+ + K L+ + ++ + GY+ + +V
Sbjct: 690 PEAHKVYKFLEMVGARMRKLGYVPDTKVV 718
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 125/493 (25%), Positives = 223/493 (45%), Gaps = 80/493 (16%)
Query: 14 TLSTYSSMLQTG-VHGNSFTFPLVLKACANIN--SIWDGKRVHSHVLKVGFQQDAFVQTG 70
++ + S+L +G + + ++F +L A ++ S+ ++ VLK G V
Sbjct: 140 AVAVFRSLLASGSLRPDDYSFTALLSAAGHLPNISVRHCAQLQCSVLKSGAGGVLSVSNA 199
Query: 71 LIDMYSKCSDFVSSR---KVLDEMPVR--------------------LRSV--------- 98
L+ +Y KC ++R KVLDEMP + RSV
Sbjct: 200 LVALYMKCEALEATRDARKVLDEMPDKDALTWTTMVVGYVRRGDVGAARSVFEEVDVKFD 259
Query: 99 VSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCC 154
V WN++IS + + + EA + + M + + L TF SV+S C+ F G S+H
Sbjct: 260 VVWNAMISGYVHSGMVVEAFELFRRMVLERVPLDEFTFTSVLSACANAGFFAHGKSVHGQ 319
Query: 155 VYKLG---LLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTI--------- 202
+ +L + +P+ N+++++Y+K G + AR IFD + +VSW TI
Sbjct: 320 ITRLQPNFVPEAALPVNNALVTLYSKCGNIAVARRIFDNMKSKDVVSWNTILSGYVESSC 379
Query: 203 ----------------------IGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILG 240
+ GYV+ G +A L N+MR V P + I
Sbjct: 380 LDKAVEVFEEMPYKNELSWMVMVSGYVHGGFSEDALKLFNRMRAEDVKPCDYTYAGAISA 439
Query: 241 CAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLW 300
C ++G+L +H L++ G+ + N L++MY +CG ++ A +F + W
Sbjct: 440 CGELGSLKHGKQLHGHLVQLGFEGSNSAGNALITMYARCGAVKEANLMFLVMPNIDSVSW 499
Query: 301 TSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVL 360
+MI Q G+ EA+ LF R++ + P+ + T L+AC G + +G + E +
Sbjct: 500 NAMISALGQHGHGREALELFDRMVAEGIYPDRISFLTVLTACNHSGLVDEGFQYFESMKR 559
Query: 361 N-GLESNRQVQTSLIHMFSKCGRINKAKEVFERVP-DKDLAVWSAMINGYAIHG---MGD 415
+ G+ T LI + + GRI +A+++ + +P + ++W A+++G G +G
Sbjct: 560 DFGIIPGEDHYTRLIDLLGRAGRIGEARDLIKTMPFEPTPSIWEAILSGCRTSGDMELGA 619
Query: 416 QALNLFYKM--QH 426
A + +KM QH
Sbjct: 620 HAADQLFKMTPQH 632
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 109/422 (25%), Positives = 166/422 (39%), Gaps = 77/422 (18%)
Query: 168 ANSVMSMYAKFGKVNEARSIFDEIGET--SIVSWTTIIGGYVNVGNVNEAFGLCNQM-RR 224
A S+++ YA G++ A S FD + + V +I Y + A + +
Sbjct: 91 ATSLVAAYAAAGRLPAAVSFFDAVPQARRDTVLHNAVISAYARASHAAPAVAVFRSLLAS 150
Query: 225 MSVTPDLVVFLNLILGCAQVGNLFL--ALSMHSLLLKSGYNNEDPLDNLLVSMYTKC--- 279
S+ PD F L+ + N+ + + +LKSG + N LV++Y KC
Sbjct: 151 GSLRPDDYSFTALLSAAGHLPNISVRHCAQLQCSVLKSGAGGVLSVSNALVALYMKCEAL 210
Query: 280 -------------------------------GDLELARRVFDAVLEKSVFLWTSMIGGYA 308
GD+ AR VF+ V K +W +MI GY
Sbjct: 211 EATRDARKVLDEMPDKDALTWTTMVVGYVRRGDVGAARSVFEEVDVKFDVVWNAMISGYV 270
Query: 309 QLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVL---NGL-E 364
G EA LF+R++ V +E T + LSACA G + GK + I N + E
Sbjct: 271 HSGMVVEAFELFRRMVLERVPLDEFTFTSVLSACANAGFFAHGKSVHGQITRLQPNFVPE 330
Query: 365 SNRQVQTSLIHMFSKCGRI-------------------------------NKAKEVFERV 393
+ V +L+ ++SKCG I +KA EVFE +
Sbjct: 331 AALPVNNALVTLYSKCGNIAVARRIFDNMKSKDVVSWNTILSGYVESSCLDKAVEVFEEM 390
Query: 394 PDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDG 453
P K+ W M++GY G + AL LF +M+ E +KP Y +SAC G + G
Sbjct: 391 PYKNELSWMVMVSGYVHGGFSEDALKLFNRMR-AEDVKPCDYTYAGAISACGELGSLKHG 449
Query: 454 LSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACM 513
+ G E S L+ + R G A MP + + W ++SA
Sbjct: 450 KQLHGHL-VQLGFEGSNSAGNALITMYARCGAVKEANLMFLVMP-NIDSVSWNAMISALG 507
Query: 514 KH 515
+H
Sbjct: 508 QH 509
Score = 102 bits (253), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 78/284 (27%), Positives = 125/284 (44%), Gaps = 42/284 (14%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHV--LK 58
MI ++G E + M+ V + FTF VL ACAN GK VH + L+
Sbjct: 265 MISGYVHSGMVVEAFELFRRMVLERVPLDEFTFTSVLSACANAGFFAHGKSVHGQITRLQ 324
Query: 59 VGFQQDAF--VQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDE 116
F +A V L+ +YSKC + +R++ D M + + VVSWN+I+S + + D+
Sbjct: 325 PNFVPEAALPVNNALVTLYSKCGNIAVARRIFDNM--KSKDVVSWNTILSGYVESSCLDK 382
Query: 117 AILVLKEM-------WVL--------GLELSA----------------STFVSVVSGC-- 143
A+ V +EM W++ G A T+ +S C
Sbjct: 383 AVEVFEEMPYKNELSWMVMVSGYVHGGFSEDALKLFNRMRAEDVKPCDYTYAGAISACGE 442
Query: 144 --SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTT 201
S + G +H + +LG + N++++MYA+ G V EA +F + VSW
Sbjct: 443 LGSLKHGKQLHGHLVQLGFEGSN-SAGNALITMYARCGAVKEANLMFLVMPNIDSVSWNA 501
Query: 202 IIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVG 245
+I G+ EA L ++M + PD + FL ++ C G
Sbjct: 502 MISALGQHGHGREALELFDRMVAEGIYPDRISFLTVLTACNHSG 545
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/239 (23%), Positives = 108/239 (45%), Gaps = 15/239 (6%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
M+ + G E+ L ++ M V +T+ + AC + S+ GK++H H++++G
Sbjct: 401 MVSGYVHGGFSEDALKLFNRMRAEDVKPCDYTYAGAISACGELGSLKHGKQLHGHLVQLG 460
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F+ LI MY++C + + MP + S VSWN++ISA + EA+ +
Sbjct: 461 FEGSNSAGNALITMYARCGAVKEANLMFLVMP-NIDS-VSWNAMISALGQHGHGREALEL 518
Query: 121 LKEMWVLGLELSASTFVSVVSGCS--------FRQGISMHCCVYKLGLLNNEIPLANSVM 172
M G+ +F++V++ C+ F+ SM G++ E ++
Sbjct: 519 FDRMVAEGIYPDRISFLTVLTACNHSGLVDEGFQYFESMK---RDFGIIPGEDHYTR-LI 574
Query: 173 SMYAKFGKVNEARSIFDEIG-ETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPD 230
+ + G++ EAR + + E + W I+ G G++ +Q+ +M+ D
Sbjct: 575 DLLGRAGRIGEARDLIKTMPFEPTPSIWEAILSGCRTSGDMELGAHAADQLFKMTPQHD 633
>gi|334186228|ref|NP_191896.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332646951|gb|AEE80472.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 884
Score = 335 bits (860), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 201/609 (33%), Positives = 326/609 (53%), Gaps = 10/609 (1%)
Query: 6 TNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG-FQQD 64
+ +G ETL + M TG NS+T L AC + GK +H+ VLK +
Sbjct: 260 STSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSE 319
Query: 65 AFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEM 124
+V LI MY++C + ++L +M VV+WNS+I + + + EA+ +M
Sbjct: 320 LYVCNALIAMYTRCGKMPQAERILRQM--NNADVVTWNSLIKGYVQNLMYKEALEFFSDM 377
Query: 125 WVLGLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGK 180
G + + S+++ + G+ +H V K G +N + + N+++ MY+K
Sbjct: 378 IAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSN-LQVGNTLIDMYSKCNL 436
Query: 181 VNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILG 240
F + + ++SWTT+I GY EA L + + + D ++ +++
Sbjct: 437 TCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRA 496
Query: 241 CAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLW 300
+ + ++ + +H +L+ G + + N LV +Y KC ++ A RVF+++ K V W
Sbjct: 497 SSVLKSMLIVKEIHCHILRKGLLD-TVIQNELVDVYGKCRNMGYATRVFESIKGKDVVSW 555
Query: 301 TSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVL 360
TSMI A G SEAV LF+R+++T + + L LSA A L +L+KG+EI Y++
Sbjct: 556 TSMISSSALNGNESEAVELFRRMVETGLSADSVALLCILSAAASLSALNKGREIHCYLLR 615
Query: 361 NGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNL 420
G + +++ M++ CG + AK VF+R+ K L +++MIN Y +HG G A+ L
Sbjct: 616 KGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVEL 675
Query: 421 FYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLL 480
F KM+H E + PD + + ++L ACSH+G++D+G F K M+ + +EP EHY+CLVD+L
Sbjct: 676 FDKMRH-ENVSPDHISFLALLYACSHAGLLDEGRGFLKIMEHEYELEPWPEHYVCLVDML 734
Query: 481 GRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYI 540
GRA A + + M E A+VW LL+AC H E+GE AA+ LL L P + GN +
Sbjct: 735 GRANCVVEAFEFVKMMKTEPTAEVWCALLAACRSHSEKEIGEIAAQRLLELEPKNPGNLV 794
Query: 541 LMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRK 600
L++N+F G W + R M + K PG S +E+DG V F A D+SH S +I +
Sbjct: 795 LVSNVFAEQGRWNDVEKVRAKMKASGMEKHPGCSWIEMDGKVHKFTARDKSHPESKEIYE 854
Query: 601 TLKELHIKL 609
L E+ KL
Sbjct: 855 KLSEVTRKL 863
Score = 214 bits (546), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 145/497 (29%), Positives = 253/497 (50%), Gaps = 13/497 (2%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI +NG L+ Y +M GV +FP +LKACA + I G +HS ++K+G
Sbjct: 153 MIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSGSELHSLLVKLG 212
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+ F+ L+ MY+K D ++R++ D + +V+ WNSI+S++S + + E + +
Sbjct: 213 YHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVL-WNSILSSYSTSGKSLETLEL 271
Query: 121 LKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
+EM + G ++ T VS ++ C + G +H V K ++E+ + N++++MY
Sbjct: 272 FREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYT 331
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
+ GK+ +A I ++ +V+W ++I GYV EA + M D V +
Sbjct: 332 RCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTS 391
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
+I ++ NL + +H+ ++K G+++ + N L+ MY+KC R F + +K
Sbjct: 392 IIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKD 451
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEE 356
+ WT++I GYAQ EA+ LF+ + K + +E L + L A + L S+ KEI
Sbjct: 452 LISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHC 511
Query: 357 YIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQ 416
+I+ GL + +Q L+ ++ KC + A VFE + KD+ W++MI+ A++G +
Sbjct: 512 HILRKGL-LDTVIQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESE 570
Query: 417 ALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFF-KSMQSNFGIEPSI----- 470
A+ LF +M GL D+V ILSA + ++ G ++ F +E SI
Sbjct: 571 AVELFRRMVET-GLSADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVAVV 629
Query: 471 EHYLCLVDLLGRAGRFD 487
+ Y C DL FD
Sbjct: 630 DMYACCGDLQSAKAVFD 646
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 126/422 (29%), Positives = 210/422 (49%), Gaps = 13/422 (3%)
Query: 32 TFPLVLKACANINSIWDGKRVHSHVLKV--GFQQDAFVQTGLIDMYSKCSDFVSSRKVLD 89
F VL+ C ++ G+++HS + K F+ D F+ L+ MY KC + KV D
Sbjct: 82 AFAYVLELCGKRRAVSQGRQLHSRIFKTFPSFELD-FLAGKLVFMYGKCGSLDDAEKVFD 140
Query: 90 EMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCS----F 145
EMP R+ +WN++I A+ A+ + M V G+ L S+F +++ C+
Sbjct: 141 EMPD--RTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDI 198
Query: 146 RQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGET-SIVSWTTIIG 204
R G +H + KLG + + N+++SMYAK ++ AR +FD E V W +I+
Sbjct: 199 RSGSELHSLLVKLGYHSTGF-IVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILS 257
Query: 205 GYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSG-YN 263
Y G E L +M P+ ++ + C L +H+ +LKS ++
Sbjct: 258 SYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHS 317
Query: 264 NEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRL 323
+E + N L++MYT+CG + A R+ + V W S+I GY Q EA+ F +
Sbjct: 318 SELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDM 377
Query: 324 LKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRI 383
+ + +E ++ + ++A L +L G E+ Y++ +G +SN QV +LI M+SKC
Sbjct: 378 IAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLT 437
Query: 384 NKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSA 443
F R+ DKDL W+ +I GYA + +AL LF + + ++ D ++ SIL A
Sbjct: 438 CYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAK-KRMEIDEMILGSILRA 496
Query: 444 CS 445
S
Sbjct: 497 SS 498
>gi|347954524|gb|AEP33762.1| organelle transcript processing 82, partial [Hesperis matronalis]
Length = 672
Score = 335 bits (860), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 189/562 (33%), Positives = 316/562 (56%), Gaps = 43/562 (7%)
Query: 101 WNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGC----SFRQGISMHCCVY 156
WN + H+ + A+ + M LGL + TF ++ C +F++G +H V
Sbjct: 43 WNIMFRGHALSSDPVSALKLYVVMISLGLLPNFFTFPFLLKSCAKSKTFKEGQQIHGHVL 102
Query: 157 KLGLLNNEIPLANSVMSMYAKFGKVNEARSIFD--------------------------- 189
KLG + ++ + S++SMYA+ G++ +A+ +FD
Sbjct: 103 KLGF-DLDLYVHTSLISMYAQNGRLEDAQKVFDRSSHRDVVSYTALITGYASRGYIESAQ 161
Query: 190 ----EIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVG 245
EI +VSW +I GY GN +A L +M + +V PD ++ CAQ G
Sbjct: 162 KMFDEIPIKDVVSWNAMISGYAETGNYKKALELFKEMMKTNVKPDESTMATVVSACAQSG 221
Query: 246 NLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIG 305
++ L +HS + G+ + + N L+ +Y+KCG++E A + + + K V W ++IG
Sbjct: 222 SIELGRQVHSWINDHGFGSNLKIVNALIDLYSKCGEVETACELLEGLSNKDVISWNTLIG 281
Query: 306 GYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYI--VLNGL 363
GY + EA+ LF+ +L++ PN+ T+ + L ACA LG++ G+ I YI L G+
Sbjct: 282 GYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKKLKGV 341
Query: 364 --ESNRQVQTSLIHMFSKCGRINKAKEVFERVP-DKDLAVWSAMINGYAIHGMGDQALNL 420
+ ++TSLI M++KCG I+ A +V + ++ L+ W+AMI G+A+HG + A ++
Sbjct: 342 VVTNASSLRTSLIDMYAKCGDIDAAPQVSDSSAFNRSLSTWNAMIFGFAMHGRANAAFDI 401
Query: 421 FYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLL 480
F +M+ G++PD + + +LSACSHSGM+D G + F+SM+ ++ I P +EHY C++DLL
Sbjct: 402 FSRMRK-NGIEPDDITFVGLLSACSHSGMLDLGRNIFRSMRQDYNITPKLEHYGCMIDLL 460
Query: 481 GRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYI 540
G +G F A + I+ MP+E +W LL AC H N+ELGE AK L+ + P + G+Y+
Sbjct: 461 GHSGLFKEAEEMINTMPMEPDGVIWCSLLKACKIHGNLELGESFAKKLIKIEPENPGSYV 520
Query: 541 LMANLFTSAGMWKEAATARGLMDDRRLTKE-PGWSQVEIDGSVQVFVAGDRSHHLSVDIR 599
L++N++ +AG W E R L++D+ + K+ PG S +EID V F+ GD+ H + +I
Sbjct: 521 LLSNIYATAGKWNEVXKIRTLLNDKGMKKKVPGCSSIEIDSVVHEFIIGDKLHPQNREIY 580
Query: 600 KTLKELHIKLLEAGYIAEADIV 621
L+E+ + L EAG++ + V
Sbjct: 581 GMLEEMEVLLEEAGFVPDTSEV 602
Score = 204 bits (518), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 137/477 (28%), Positives = 232/477 (48%), Gaps = 53/477 (11%)
Query: 15 LSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDM 74
L Y M+ G+ N FTFP +LK+CA + +G+++H HVLK+GF D +V T LI M
Sbjct: 60 LKLYVVMISLGLLPNFFTFPFLLKSCAKSKTFKEGQQIHGHVLKLGFDLDLYVHTSLISM 119
Query: 75 Y---------------SKCSDFV----------------SSRKVLDEMPVRLRSVVSWNS 103
Y S D V S++K+ DE+P+ + VVSWN+
Sbjct: 120 YAQNGRLEDAQKVFDRSSHRDVVSYTALITGYASRGYIESAQKMFDEIPI--KDVVSWNA 177
Query: 104 IISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGC----SFRQGISMHCCVYKLG 159
+IS ++ +A+ + KEM ++ ST +VVS C S G +H + G
Sbjct: 178 MISGYAETGNYKKALELFKEMMKTNVKPDESTMATVVSACAQSGSIELGRQVHSWINDHG 237
Query: 160 LLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLC 219
+N + + N+++ +Y+K G+V A + + + ++SW T+IGGY ++ EA L
Sbjct: 238 FGSN-LKIVNALIDLYSKCGEVETACELLEGLSNKDVISWNTLIGGYTHMNLYKEALLLF 296
Query: 220 NQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKS----GYNNEDPLDNLLVSM 275
+M R TP+ V L+++ CA +G + + +H + K N L L+ M
Sbjct: 297 QEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKKLKGVVVTNASSLRTSLIDM 356
Query: 276 YTKCGDLELARRVFD-AVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEAT 334
Y KCGD++ A +V D + +S+ W +MI G+A G + A ++F R+ K + P++ T
Sbjct: 357 YAKCGDIDAAPQVSDSSAFNRSLSTWNAMIFGFAMHGRANAAFDIFSRMRKNGIEPDDIT 416
Query: 335 LATTLSACAELGSLSKGKEI-----EEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEV 389
LSAC+ G L G+ I ++Y + LE +I + G +A+E+
Sbjct: 417 FVGLLSACSHSGMLDLGRNIFRSMRQDYNITPKLEH----YGCMIDLLGHSGLFKEAEEM 472
Query: 390 FERVP-DKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACS 445
+P + D +W +++ IHG + + K+ +E P + V S + A +
Sbjct: 473 INTMPMEPDGVIWCSLLKACKIHGNLELGESFAKKLIKIEPENPGSYVLLSNIYATA 529
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 95/307 (30%), Positives = 157/307 (51%), Gaps = 32/307 (10%)
Query: 178 FGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNL 237
F + A S+F+ I E + + W + G+ + A L M + + P+ F L
Sbjct: 22 FDGLPYAISVFETIPEPNQLIWNIMFRGHALSSDPVSALKLYVVMISLGLLPNFFTFPFL 81
Query: 238 ILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSV 297
+ CA+ +H +LK G++ + + L+SMY + G LE A++VFD + V
Sbjct: 82 LKSCAKSKTFKEGQQIHGHVLKLGFDLDLYVHTSLISMYAQNGRLEDAQKVFDRSSHRDV 141
Query: 298 FLWTSMIGGYAQLGY-----------P--------------------SEAVNLFKRLLKT 326
+T++I GYA GY P +A+ LFK ++KT
Sbjct: 142 VSYTALITGYASRGYIESAQKMFDEIPIKDVVSWNAMISGYAETGNYKKALELFKEMMKT 201
Query: 327 SVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKA 386
+V+P+E+T+AT +SACA+ GS+ G+++ +I +G SN ++ +LI ++SKCG + A
Sbjct: 202 NVKPDESTMATVVSACAQSGSIELGRQVHSWINDHGFGSNLKIVNALIDLYSKCGEVETA 261
Query: 387 KEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSH 446
E+ E + +KD+ W+ +I GY + +AL LF +M G P+ V SIL AC+H
Sbjct: 262 CELLEGLSNKDVISWNTLIGGYTHMNLYKEALLLFQEMLR-SGETPNDVTMLSILPACAH 320
Query: 447 SGMVDDG 453
G +D G
Sbjct: 321 LGAIDIG 327
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 106/213 (49%), Gaps = 7/213 (3%)
Query: 282 LELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSA 341
L A VF+ + E + +W M G+A P A+ L+ ++ + PN T L +
Sbjct: 25 LPYAISVFETIPEPNQLIWNIMFRGHALSSDPVSALKLYVVMISLGLLPNFFTFPFLLKS 84
Query: 342 CAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVW 401
CA+ + +G++I +++ G + + V TSLI M+++ GR+ A++VF+R +D+ +
Sbjct: 85 CAKSKTFKEGQQIHGHVLKLGFDLDLYVHTSLISMYAQNGRLEDAQKVFDRSSHRDVVSY 144
Query: 402 SAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQ 461
+A+I GYA G + A +F ++ D V + +++S + +G L FK M
Sbjct: 145 TALITGYASRGYIESAQKMFDEIP-----IKDVVSWNAMISGYAETGNYKKALELFKEMM 199
Query: 462 SNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIH 494
++P +V ++G +L + +H
Sbjct: 200 KT-NVKPDESTMATVVSACAQSGSIELG-RQVH 230
>gi|357440191|ref|XP_003590373.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355479421|gb|AES60624.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 840
Score = 335 bits (859), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 179/527 (33%), Positives = 293/527 (55%), Gaps = 27/527 (5%)
Query: 121 LKEMWVLGLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
L +M + G + + ++++ C +FR+G +H + K L + + L ++ +Y
Sbjct: 231 LLQMALHGFNMKFENYNAILNECVNKRAFREGQRVHAHMIKTRYLPS-VFLRTRLIVLYT 289
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVT-------- 228
K + +A ++FDE+ E ++VSWT +I Y G ++A L ++S+T
Sbjct: 290 KCDSLGDAHNVFDEMPERNVVSWTAMISAYSQRGYASQALNLFFADVKISLTGVYAIDKL 349
Query: 229 -------------PDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSM 275
P+ F ++ C L +HSL++K Y + + + L+ M
Sbjct: 350 KLSNPNRPWVCTEPNEFTFATVLTSCTSSLGFILGRQIHSLIIKLNYEDHVFVGSSLLDM 409
Query: 276 YTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATL 335
Y K G + AR VF+ + E+ V T++I GYAQLG EA+ LF+RL ++ N T
Sbjct: 410 YAKDGKIHEARTVFECLPERDVVSCTAIISGYAQLGLDEEALELFRRLQGEGMKSNYVTY 469
Query: 336 ATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPD 395
L+A + L +L GK++ +++ + + S +Q SLI M+SKCG + ++ +F+ + +
Sbjct: 470 TGVLTALSGLAALDLGKQVHNHVLRSEIPSFVVLQNSLIDMYSKCGNLTYSRRIFDTMYE 529
Query: 396 KDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLS 455
+ + W+AM+ GY+ HG G + L LF M+ +KPD+V ++LS CSH G+ D GL+
Sbjct: 530 RTVISWNAMLVGYSKHGEGREVLKLFTLMREETKVKPDSVTILAVLSGCSHGGLEDKGLN 589
Query: 456 FFKSMQS-NFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMK 514
F M S +EP +EHY C+VDLLGR+GR + A + I +MP E A +W LL AC
Sbjct: 590 IFNDMSSGKIEVEPKMEHYGCVVDLLGRSGRVEEAFEFIKKMPFEPTAAIWGSLLGACRV 649
Query: 515 HHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWS 574
H NV++GE+A + LL + PG+ GNY++++NL+ SAG W++ ++ R LM + +TKEPG S
Sbjct: 650 HSNVDIGEFAGQQLLEIEPGNAGNYVILSNLYASAGRWEDVSSLRDLMLKKTVTKEPGRS 709
Query: 575 QVEIDGSVQVFVAGDRSHHLSVDIRKTLKELHIKLLEAGYIAEADIV 621
+E+D + F A DRSH +I +KEL E GY+ + V
Sbjct: 710 SIELDQVLHTFHASDRSHPRREEICMKVKELSTSFKEVGYVPDLSCV 756
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 127/450 (28%), Positives = 226/450 (50%), Gaps = 47/450 (10%)
Query: 4 NSTNNGSFEETLSTYSSMLQTGVHGNSFTFP---LVLKACANINSIWDGKRVHSHVLKVG 60
NS +F + +LQ +HG + F +L C N + +G+RVH+H++K
Sbjct: 214 NSRTLSTFTTHIHLQQPLLQMALHGFNMKFENYNAILNECVNKRAFREGQRVHAHMIKTR 273
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+ F++T LI +Y+KC + V DEMP R+VVSW ++ISA+S+ +A+ +
Sbjct: 274 YLPSVFLRTRLIVLYTKCDSLGDAHNVFDEMPE--RNVVSWTAMISAYSQRGYASQALNL 331
Query: 121 L----------------------KEMWVLGLELSASTFVSVVSGCS----FRQGISMHCC 154
WV E + TF +V++ C+ F G +H
Sbjct: 332 FFADVKISLTGVYAIDKLKLSNPNRPWVC-TEPNEFTFATVLTSCTSSLGFILGRQIHSL 390
Query: 155 VYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNE 214
+ KL + + + +S++ MYAK GK++EAR++F+ + E +VS T II GY +G E
Sbjct: 391 IIKLN-YEDHVFVGSSLLDMYAKDGKIHEARTVFECLPERDVVSCTAIISGYAQLGLDEE 449
Query: 215 AFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVS 274
A L +++ + + V + ++ + + L L +H+ +L+S + L N L+
Sbjct: 450 ALELFRRLQGEGMKSNYVTYTGVLTALSGLAALDLGKQVHNHVLRSEIPSFVVLQNSLID 509
Query: 275 MYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLL-KTSVRPNEA 333
MY+KCG+L +RR+FD + E++V W +M+ GY++ G E + LF + +T V+P+
Sbjct: 510 MYSKCGNLTYSRRIFDTMYERTVISWNAMLVGYSKHGEGREVLKLFTLMREETKVKPDSV 569
Query: 334 TLATTLSACAELGSLSKGKEIEEYIVLNGLESNR-QVQTSLIH------MFSKCGRINKA 386
T+ LS C+ G KG I N + S + +V+ + H + + GR+ +A
Sbjct: 570 TILAVLSGCSHGGLEDKGLNI-----FNDMSSGKIEVEPKMEHYGCVVDLLGRSGRVEEA 624
Query: 387 KEVFERVP-DKDLAVWSAMINGYAIHGMGD 415
E +++P + A+W +++ +H D
Sbjct: 625 FEFIKKMPFEPTAAIWGSLLGACRVHSNVD 654
>gi|302765581|ref|XP_002966211.1| hypothetical protein SELMODRAFT_85415 [Selaginella moellendorffii]
gi|300165631|gb|EFJ32238.1| hypothetical protein SELMODRAFT_85415 [Selaginella moellendorffii]
Length = 969
Score = 335 bits (859), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 186/551 (33%), Positives = 302/551 (54%), Gaps = 17/551 (3%)
Query: 5 STNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQD 64
S + + L Y SML GV + +VL+AC ++ + GK VH+HV++ G + D
Sbjct: 393 SREDSHCRDALPLYRSMLHEGVMPKTLALSMVLEACGSLAELKGGKLVHAHVIESGLEGD 452
Query: 65 AFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEM 124
V L++MY+KC +RKV D + RS + WNS+I+A+ + EA+ + +EM
Sbjct: 453 -LVGISLVNMYAKCGTVGEARKVFDR--INNRSRILWNSMITAYQEKDPH-EALHLFREM 508
Query: 125 WVLGLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGK 180
G+ TF++V++ C G ++H + G ++ +A ++ +MYAK G
Sbjct: 509 QPEGVSPDRITFMTVLNACVNAADLENGRTIHTRIVDSGF-AADVRVATALFNMYAKCGS 567
Query: 181 VNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILG 240
+ EAR +FD + +VSW +I YV + A LC M+ + PD F +L+
Sbjct: 568 LGEARGVFDSMVFRDVVSWNNMIAAYVQGRDGEGAISLCWAMQLEGMRPDKATFTSLLNA 627
Query: 241 CAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS---- 296
C+ L +HS + +S N+ + L++MY CG L AR +FD + S
Sbjct: 628 CSDPNRLVDGRQIHSWIAESRLENDIVMVTGLITMYANCGSLNNAREIFDNIFSNSRQHH 687
Query: 297 --VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEI 354
+FLWTSMI Y Q G +A+ L++++ V + T + L+ACA L L +G+ I
Sbjct: 688 RDLFLWTSMITAYEQHGEYRKALELYEQMHSRQVEADRVTFISVLNACAHLSDLRQGQAI 747
Query: 355 EEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMG 414
++ GL ++ V S++ M+ KCG ++A VFE+ KD+++W+A+I YA HG G
Sbjct: 748 HARVMRRGLATDVAVANSIVFMYGKCGSFDEASIVFEKTKHKDISLWTALIASYARHGHG 807
Query: 415 DQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYL 474
+QAL +F +++ +G++ + + ++LSACSH G++++G FF SM + GIEP++EH+
Sbjct: 808 EQALWIFRRLRQ-DGIELSNLTFVAMLSACSHVGLIEEGCEFFASM-AELGIEPNMEHHS 865
Query: 475 CLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPG 534
CLVDLL RAG A + + MPV V LL+AC H +VE A+ L L+P
Sbjct: 866 CLVDLLARAGHLHTAEEFLSRMPVAANTIVLTALLAACRVHGDVERARRVAEKLEALDPE 925
Query: 535 STGNYILMANL 545
S Y+ ++N+
Sbjct: 926 SEAPYVTLSNI 936
Score = 236 bits (603), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 156/542 (28%), Positives = 275/542 (50%), Gaps = 25/542 (4%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI + +G F +L + ML G NS TF +L C + + G+++H+ V++
Sbjct: 287 MIGAYSQDGKFSLSLQLFREMLLEGTAPNSVTFVSILSGCEAPSLLEQGRQIHALVVESS 346
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRA---CLNDEA 117
+ V L+ MYS+C + SR + D M VR VSW++II A SR C +A
Sbjct: 347 LESHVVVANSLLGMYSRCRSWEDSRSLFDRMSVR--DSVSWSTIIMACSREDSHC--RDA 402
Query: 118 ILVLKEMWVLGLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMS 173
+ + + M G+ V+ C + G +H V + GL + + + S+++
Sbjct: 403 LPLYRSMLHEGVMPKTLALSMVLEACGSLAELKGGKLVHAHVIESGLEGDLVGI--SLVN 460
Query: 174 MYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVV 233
MYAK G V EAR +FD I S + W ++I Y + +EA L +M+ V+PD +
Sbjct: 461 MYAKCGTVGEARKVFDRINNRSRILWNSMITAY-QEKDPHEALHLFREMQPEGVSPDRIT 519
Query: 234 FLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVL 293
F+ ++ C +L ++H+ ++ SG+ + + L +MY KCG L AR VFD+++
Sbjct: 520 FMTVLNACVNAADLENGRTIHTRIVDSGFAADVRVATALFNMYAKCGSLGEARGVFDSMV 579
Query: 294 EKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKE 353
+ V W +MI Y Q A++L + +RP++AT + L+AC++ L G++
Sbjct: 580 FRDVVSWNNMIAAYVQGRDGEGAISLCWAMQLEGMRPDKATFTSLLNACSDPNRLVDGRQ 639
Query: 354 IEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFE------RVPDKDLAVWSAMING 407
I +I + LE++ + T LI M++ CG +N A+E+F+ R +DL +W++MI
Sbjct: 640 IHSWIAESRLENDIVMVTGLITMYANCGSLNNAREIFDNIFSNSRQHHRDLFLWTSMITA 699
Query: 408 YAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFF-KSMQSNFGI 466
Y HG +AL L+ +M H ++ D V + S+L+AC+H + G + + M+
Sbjct: 700 YEQHGEYRKALELYEQM-HSRQVEADRVTFISVLNACAHLSDLRQGQAIHARVMRRGLAT 758
Query: 467 EPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAK 526
+ ++ + +V + G+ G FD A + E +W L+++ +H + E + +
Sbjct: 759 DVAVAN--SIVFMYGKCGSFDEA-SIVFEKTKHKDISLWTALIASYARHGHGEQALWIFR 815
Query: 527 NL 528
L
Sbjct: 816 RL 817
Score = 216 bits (551), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 133/460 (28%), Positives = 245/460 (53%), Gaps = 12/460 (2%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI + +G F +L + ML G NS TF +L C + + G+++H+ V++
Sbjct: 82 MIGAYSQDGKFSLSLQLFREMLLEGTAPNSVTFVSILSGCEAPSLLEQGRQIHALVVESS 141
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSR-KVLDEMPVRLRSVVSWNSIISAHSRACLNDEAIL 119
+ V L+ MYS+C + SR + M + R VVSW +I A+S+ +I
Sbjct: 142 LESHVVVANSLLGMYSRCRSWEDSRMQTFARM--KRRDVVSWTVMIGAYSQDGKFSLSIQ 199
Query: 120 VLKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNN-EIPLANSVMSM 174
+ +EM + G ++ TFVS++SGC QG +H V + L ++ +I + N ++M
Sbjct: 200 LFREMLLEGTAPNSVTFVSILSGCEAPSLLEQGRQIHALVVESSLESHLDIGVLNLTINM 259
Query: 175 YAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVF 234
Y K G ++ A F + +VSWT +IG Y G + + L +M P+ V F
Sbjct: 260 YVKCGCLDGAVQTFARMKRRDVVSWTVMIGAYSQDGKFSLSLQLFREMLLEGTAPNSVTF 319
Query: 235 LNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLE 294
++++ GC L +H+L+++S + + N L+ MY++C E +R +FD +
Sbjct: 320 VSILSGCEAPSLLEQGRQIHALVVESSLESHVVVANSLLGMYSRCRSWEDSRSLFDRMSV 379
Query: 295 KSVFLWTSMIGGYAQL-GYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKE 353
+ W+++I ++ + +A+ L++ +L V P L+ L AC L L GK
Sbjct: 380 RDSVSWSTIIMACSREDSHCRDALPLYRSMLHEGVMPKTLALSMVLEACGSLAELKGGKL 439
Query: 354 IEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGM 413
+ +++ +GLE + V SL++M++KCG + +A++VF+R+ ++ +W++MI Y
Sbjct: 440 VHAHVIESGLEGD-LVGISLVNMYAKCGTVGEARKVFDRINNRSRILWNSMITAYQ-EKD 497
Query: 414 GDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDG 453
+AL+LF +MQ EG+ PD + + ++L+AC ++ +++G
Sbjct: 498 PHEALHLFREMQP-EGVSPDRITFMTVLNACVNAADLENG 536
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 126/434 (29%), Positives = 215/434 (49%), Gaps = 16/434 (3%)
Query: 21 MLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSD 80
M + G+ + +L AC + ++ +GK + + + D V+ I+MY KC
Sbjct: 1 MDRRGIPPDRVMIKTLLTACTKLGALEEGKLIQDRLAGTQLELDIGVRNLTINMYVKCGC 60
Query: 81 FVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVV 140
+ + M + R VVSW +I A+S+ ++ + +EM + G ++ TFVS++
Sbjct: 61 LDGAVQTFARM--KRRDVVSWTVMIGAYSQDGKFSLSLQLFREMLLEGTAPNSVTFVSIL 118
Query: 141 SGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEAR-SIFDEIGETS 195
SGC QG +H V + L + + +ANS++ MY++ ++R F +
Sbjct: 119 SGCEAPSLLEQGRQIHALVVESSL-ESHVVVANSLLGMYSRCRSWEDSRMQTFARMKRRD 177
Query: 196 IVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHS 255
+VSWT +IG Y G + + L +M P+ V F++++ GC L +H+
Sbjct: 178 VVSWTVMIGAYSQDGKFSLSIQLFREMLLEGTAPNSVTFVSILSGCEAPSLLEQGRQIHA 237
Query: 256 LLLKSGYNNEDPLD----NLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLG 311
L+++S E LD NL ++MY KCG L+ A + F + + V WT MIG Y+Q G
Sbjct: 238 LVVESSL--ESHLDIGVLNLTINMYVKCGCLDGAVQTFARMKRRDVVSWTVMIGAYSQDG 295
Query: 312 YPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQT 371
S ++ LF+ +L PN T + LS C L +G++I +V + LES+ V
Sbjct: 296 KFSLSLQLFREMLLEGTAPNSVTFVSILSGCEAPSLLEQGRQIHALVVESSLESHVVVAN 355
Query: 372 SLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIH-GMGDQALNLFYKMQHVEGL 430
SL+ M+S+C ++ +F+R+ +D WS +I + AL L+ M H EG+
Sbjct: 356 SLLGMYSRCRSWEDSRSLFDRMSVRDSVSWSTIIMACSREDSHCRDALPLYRSMLH-EGV 414
Query: 431 KPDAVVYTSILSAC 444
P + + +L AC
Sbjct: 415 MPKTLALSMVLEAC 428
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/99 (21%), Positives = 51/99 (51%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+I + +G E+ L + + Q G+ ++ TF +L AC+++ I +G + + ++G
Sbjct: 797 LIASYARHGHGEQALWIFRRLRQDGIELSNLTFVAMLSACSHVGLIEEGCEFFASMAELG 856
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVV 99
+ + + L+D+ ++ ++ + L MPV ++V
Sbjct: 857 IEPNMEHHSCLVDLLARAGHLHTAEEFLSRMPVAANTIV 895
>gi|357116509|ref|XP_003560023.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Brachypodium distachyon]
Length = 804
Score = 335 bits (858), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 198/626 (31%), Positives = 322/626 (51%), Gaps = 79/626 (12%)
Query: 69 TGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLG 128
T L+ Y+ S D +PV R V N++ISA +RA L A+ V + +
Sbjct: 93 TSLVSAYAVAGRLRDSAAFFDSVPVARRDTVLHNAMISAFARASLAAPAVSVFRSLLASD 152
Query: 129 LELSAS--TFVSVVSGCSFRQGIS------MHCCVYKLGLLNNEIPLANSVMSMYAKF-- 178
L +F S++S ++ +HC V+KLG + ++N+++++Y K
Sbjct: 153 DSLRPDDYSFTSLLSAVGQMHDLAVSHCTQLHCAVHKLGA-GAVLSVSNALIALYMKCDA 211
Query: 179 -GKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVN------------------------ 213
G +AR + DE+ E ++WTTI+ G+V G+V+
Sbjct: 212 PGVTRDARKVLDEMPEKDELTWTTIVVGHVRKGDVHAARSAFEEIDGEFDVVWNAMISGY 271
Query: 214 -------EAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHS--LLLKSGYNN 264
EAF L +M + PD F +L+ CA G S+H + L+ +
Sbjct: 272 VQSGMCAEAFELFRRMVSKRIPPDEFTFTSLLSACANAGFFLHGKSVHGQFIRLQPDFVP 331
Query: 265 ED--PLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLG----------- 311
E P++N LV++Y+K G + +A ++FD++ K V W +++ GY + G
Sbjct: 332 EAALPVNNALVTLYSKSGKIAVATKIFDSMTLKDVVSWNTILSGYIESGCLDNAARIFKE 391
Query: 312 --YPSE------------------AVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKG 351
Y SE A+ LF ++ V+P + T A ++AC ELG+L G
Sbjct: 392 MPYKSELSWMVMVSGYVHGGLAEDALKLFNQMRSEDVKPCDYTYAGAVAACGELGALKHG 451
Query: 352 KEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIH 411
K++ ++V G E++ +L+ M+++CG + A+ VF +P+ D W+AMI+ H
Sbjct: 452 KQLHAHLVQCGFEASNSAGNALLTMYARCGAVKDARLVFLVMPNVDSVSWNAMISALGQH 511
Query: 412 GMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIE 471
G G +AL LF +M +G+ PD + + +IL+AC+H+G+VDDG +F+SM+ +FGI P +
Sbjct: 512 GHGREALELFDQMV-AQGIYPDRISFLTILTACNHAGLVDDGFQYFESMERDFGISPGED 570
Query: 472 HYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTL 531
HY L+DLLGRAGR A I MP E +W +LS C + ++ELG YAA L +
Sbjct: 571 HYARLIDLLGRAGRIGEARDLIKTMPFEPTPAIWEAILSGCRINGDMELGAYAADQLFKM 630
Query: 532 NPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRS 591
P G YIL++N +++AG W +AA R LM DR + KEPG S +E+ V VF+ GD
Sbjct: 631 VPEHDGTYILLSNTYSAAGRWVDAARVRKLMRDRGVKKEPGCSWIEVGNKVHVFLVGDTK 690
Query: 592 HHLSVDIRKTLKELHIKLLEAGYIAE 617
H + ++ + L+ + K+ + GY+ +
Sbjct: 691 HPDAHEVYRFLEMVGAKMRKLGYVPD 716
Score = 155 bits (391), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 122/490 (24%), Positives = 219/490 (44%), Gaps = 79/490 (16%)
Query: 14 TLSTYSSMLQT--GVHGNSFTFPLVLKACANIN--SIWDGKRVHSHVLKVGFQQDAFVQT 69
+S + S+L + + + ++F +L A ++ ++ ++H V K+G V
Sbjct: 141 AVSVFRSLLASDDSLRPDDYSFTSLLSAVGQMHDLAVSHCTQLHCAVHKLGAGAVLSVSN 200
Query: 70 GLIDMYSKCSD---FVSSRKVLDEMP--------------VRLRSV-------------- 98
LI +Y KC +RKVLDEMP VR V
Sbjct: 201 ALIALYMKCDAPGVTRDARKVLDEMPEKDELTWTTIVVGHVRKGDVHAARSAFEEIDGEF 260
Query: 99 -VSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCS----FRQGISMHC 153
V WN++IS + ++ + EA + + M + TF S++S C+ F G S+H
Sbjct: 261 DVVWNAMISGYVQSGMCAEAFELFRRMVSKRIPPDEFTFTSLLSACANAGFFLHGKSVHG 320
Query: 154 CVYKLG---LLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVG 210
+L + +P+ N+++++Y+K GK+ A IFD + +VSW TI+ GY+ G
Sbjct: 321 QFIRLQPDFVPEAALPVNNALVTLYSKSGKIAVATKIFDSMTLKDVVSWNTILSGYIESG 380
Query: 211 NVN-------------------------------EAFGLCNQMRRMSVTPDLVVFLNLIL 239
++ +A L NQMR V P + +
Sbjct: 381 CLDNAARIFKEMPYKSELSWMVMVSGYVHGGLAEDALKLFNQMRSEDVKPCDYTYAGAVA 440
Query: 240 GCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFL 299
C ++G L +H+ L++ G+ + N L++MY +CG ++ AR VF +
Sbjct: 441 ACGELGALKHGKQLHAHLVQCGFEASNSAGNALLTMYARCGAVKDARLVFLVMPNVDSVS 500
Query: 300 WTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIV 359
W +MI Q G+ EA+ LF +++ + P+ + T L+AC G + G + E +
Sbjct: 501 WNAMISALGQHGHGREALELFDQMVAQGIYPDRISFLTILTACNHAGLVDDGFQYFESME 560
Query: 360 LN-GLESNRQVQTSLIHMFSKCGRINKAKEVFERVP-DKDLAVWSAMINGYAIHG---MG 414
+ G+ LI + + GRI +A+++ + +P + A+W A+++G I+G +G
Sbjct: 561 RDFGISPGEDHYARLIDLLGRAGRIGEARDLIKTMPFEPTPAIWEAILSGCRINGDMELG 620
Query: 415 DQALNLFYKM 424
A + +KM
Sbjct: 621 AYAADQLFKM 630
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 75/284 (26%), Positives = 120/284 (42%), Gaps = 42/284 (14%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKV- 59
MI +G E + M+ + + FTF +L ACAN GK VH +++
Sbjct: 267 MISGYVQSGMCAEAFELFRRMVSKRIPPDEFTFTSLLSACANAGFFLHGKSVHGQFIRLQ 326
Query: 60 -GFQQDAF--VQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDE 116
F +A V L+ +YSK + K+ D M L+ VVSWN+I+S + + D
Sbjct: 327 PDFVPEAALPVNNALVTLYSKSGKIAVATKIFDSM--TLKDVVSWNTILSGYIESGCLDN 384
Query: 117 AILVLKEM-------WVL--------GLELSA----------------STFVSVVSGC-- 143
A + KEM W++ GL A T+ V+ C
Sbjct: 385 AARIFKEMPYKSELSWMVMVSGYVHGGLAEDALKLFNQMRSEDVKPCDYTYAGAVAACGE 444
Query: 144 --SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTT 201
+ + G +H + + G + N++++MYA+ G V +AR +F + VSW
Sbjct: 445 LGALKHGKQLHAHLVQCGFEASN-SAGNALLTMYARCGAVKDARLVFLVMPNVDSVSWNA 503
Query: 202 IIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVG 245
+I G+ EA L +QM + PD + FL ++ C G
Sbjct: 504 MISALGQHGHGREALELFDQMVAQGIYPDRISFLTILTACNHAG 547
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 106/234 (45%), Gaps = 15/234 (6%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
M+ + G E+ L ++ M V +T+ + AC + ++ GK++H+H+++ G
Sbjct: 403 MVSGYVHGGLAEDALKLFNQMRSEDVKPCDYTYAGAVAACGELGALKHGKQLHAHLVQCG 462
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F+ L+ MY++C +R V MP VSWN++ISA + EA+ +
Sbjct: 463 FEASNSAGNALLTMYARCGAVKDARLVFLVMPN--VDSVSWNAMISALGQHGHGREALEL 520
Query: 121 LKEMWVLGLELSASTFVSVVSGCS--------FRQGISMHCCVYKLGLLNNEIPLANSVM 172
+M G+ +F+++++ C+ F+ SM G+ E A ++
Sbjct: 521 FDQMVAQGIYPDRISFLTILTACNHAGLVDDGFQYFESME---RDFGISPGEDHYAR-LI 576
Query: 173 SMYAKFGKVNEARSIFDEIG-ETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRM 225
+ + G++ EAR + + E + W I+ G G++ +Q+ +M
Sbjct: 577 DLLGRAGRIGEARDLIKTMPFEPTPAIWEAILSGCRINGDMELGAYAADQLFKM 630
>gi|147862014|emb|CAN80898.1| hypothetical protein VITISV_028645 [Vitis vinifera]
Length = 822
Score = 335 bits (858), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 188/624 (30%), Positives = 323/624 (51%), Gaps = 42/624 (6%)
Query: 36 VLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRL 95
+L +C ++ S+ +G+++H H++ +GF+Q + L+ YS + V + + + +
Sbjct: 180 LLSSCTDVKSLAEGRQLHGHIISLGFEQHPILVPKLVTFYSAFNLLVDAHVITEN--SNI 237
Query: 96 RSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCV 155
WN +IS++ R +A+ K+M G+ T+ SV+ C + V
Sbjct: 238 LHPFPWNLLISSYVRNGFCQKALSAYKQMVKKGIRPDNFTYPSVLKACGEELDLGFGKEV 297
Query: 156 YK---LGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWT------------ 200
++ + + + N+++SMY K GKV AR +FD+I E VSW
Sbjct: 298 HESINASRIKWSLIVHNALISMYGKCGKVGIARDLFDKIPERDAVSWNSMISVYASMGMW 357
Query: 201 -----------------------TIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNL 237
TI GGY+ GN A L +QMR+ D V +
Sbjct: 358 NEAFELFGSMWAEDIELNIIIWNTIAGGYLRTGNYKGALELLSQMRKXGSHLDSVALIIG 417
Query: 238 ILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSV 297
+ C+ +G+ L +HS ++S + D + N L++MY++C DL+ A +F + KS+
Sbjct: 418 LGACSHIGDAKLGKEIHSFAIRSCFGEVDTVKNSLITMYSRCKDLKHAYLLFQLMEAKSL 477
Query: 298 FLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEY 357
W S+I G + EA L + +L + + PN T+A+ L CA + +L GKE Y
Sbjct: 478 ISWNSIISGCCHMDRSEEASFLLREMLLSGIEPNYVTIASVLPLCARVANLQHGKEFHCY 537
Query: 358 IVLN-GLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQ 416
+ + + + +L+ M+++ G++ +A+ VF+ + ++D +++MI GY + G G
Sbjct: 538 MTRREDFKDHLLLWNALVDMYARSGKVLEARRVFDMLGERDKMTYTSMIAGYGMQGEGQA 597
Query: 417 ALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCL 476
AL LF +M + + +KPD + ++LSACSHSG+V G F+ M+S +G+ P +EH+ C+
Sbjct: 598 ALKLFEEMNNFQ-IKPDHITMIAVLSACSHSGLVTQGQLLFEKMRSLYGLTPHLEHFACM 656
Query: 477 VDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGST 536
DL GRAG + A + I MP + +WA L+ AC H N E+GE+AA+ LL + P +
Sbjct: 657 TDLFGRAGLLNKAKEIIRNMPYKPTPAMWATLIGACRIHRNTEIGEWAAEKLLEMKPENP 716
Query: 537 GNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSV 596
G Y+L+AN++ +AG W + A R M D + K PG + V++ F+ D S+ +
Sbjct: 717 GYYVLIANMYAAAGCWNKLAKVRXFMRDLGVRKAPGCAWVDVGTGFSPFLVDDTSNANAD 776
Query: 597 DIRKTLKELHIKLLEAGYIAEADI 620
+I L+ L + + EAGYI+ D
Sbjct: 777 EIYPLLEGLTMVIKEAGYISSEDF 800
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 126/453 (27%), Positives = 212/453 (46%), Gaps = 45/453 (9%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+I + NG ++ LS Y M++ G+ ++FT+P VLKAC + GK VH +
Sbjct: 246 LISSYVRNGFCQKALSAYKQMVKKGIRPDNFTYPSVLKACGEELDLGFGKEVHESINASR 305
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+ V LI MY KC +R + D++P R VSWNS+IS ++ + +EA +
Sbjct: 306 IKWSLIVHNALISMYGKCGKVGIARDLFDKIPE--RDAVSWNSMISVYASMGMWNEAFEL 363
Query: 121 LKEMWVLGLELSASTFVSVVSGCSFRQG-------------------------ISMHCCV 155
MW +EL+ + + ++G R G I + C
Sbjct: 364 FGSMWAEDIELNIIIW-NTIAGGYLRTGNYKGALELLSQMRKXGSHLDSVALIIGLGACS 422
Query: 156 Y----KLG----------LLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTT 201
+ KLG + NS+++MY++ + A +F + S++SW +
Sbjct: 423 HIGDAKLGKEIHSFAIRSCFGEVDTVKNSLITMYSRCKDLKHAYLLFQLMEAKSLISWNS 482
Query: 202 IIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLL-KS 260
II G ++ EA L +M + P+ V +++ CA+V NL H + +
Sbjct: 483 IISGCCHMDRSEEASFLLREMLLSGIEPNYVTIASVLPLCARVANLQHGKEFHCYMTRRE 542
Query: 261 GYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLF 320
+ + L N LV MY + G + ARRVFD + E+ +TSMI GY G A+ LF
Sbjct: 543 DFKDHLLLWNALVDMYARSGKVLEARRVFDMLGERDKMTYTSMIAGYGMQGEGQAALKLF 602
Query: 321 KRLLKTSVRPNEATLATTLSACAELGSLSKGKEI-EEYIVLNGLESNRQVQTSLIHMFSK 379
+ + ++P+ T+ LSAC+ G +++G+ + E+ L GL + + + +F +
Sbjct: 603 EEMNNFQIKPDHITMIAVLSACSHSGLVTQGQLLFEKMRSLYGLTPHLEHFACMTDLFGR 662
Query: 380 CGRINKAKEVFERVPDKDL-AVWSAMINGYAIH 411
G +NKAKE+ +P K A+W+ +I IH
Sbjct: 663 AGLLNKAKEIIRNMPYKPTPAMWATLIGACRIH 695
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 93/387 (24%), Positives = 161/387 (41%), Gaps = 41/387 (10%)
Query: 138 SVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGE 193
S++S C S +G +H + LG + I L +++ Y+ F + +A I +
Sbjct: 179 SLLSSCTDVKSLAEGRQLHGHIISLGFEQHPI-LVPKLVTFYSAFNLLVDAHVITENSNI 237
Query: 194 TSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSM 253
W +I YV G +A QM + + PD + +++ C + +L +
Sbjct: 238 LHPFPWNLLISSYVRNGFCQKALSAYKQMVKKGIRPDNFTYPSVLKACGEELDLGFGKEV 297
Query: 254 HSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYP 313
H + S + N L+SMY KCG + +AR +FD + E+ W SMI YA +G
Sbjct: 298 HESINASRIKWSLIVHNALISMYGKCGKVGIARDLFDKIPERDAVSWNSMISVYASMGMW 357
Query: 314 SEAVNLFKRLLKTSVRPN-----------------------------------EATLATT 338
+EA LF + + N L
Sbjct: 358 NEAFELFGSMWAEDIELNIIIWNTIAGGYLRTGNYKGALELLSQMRKXGSHLDSVALIIG 417
Query: 339 LSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDL 398
L AC+ +G GKEI + + + V+ SLI M+S+C + A +F+ + K L
Sbjct: 418 LGACSHIGDAKLGKEIHSFAIRSCFGEVDTVKNSLITMYSRCKDLKHAYLLFQLMEAKSL 477
Query: 399 AVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFK 458
W+++I+G ++A L +M + G++P+ V S+L C+ + G F
Sbjct: 478 ISWNSIISGCCHMDRSEEASFLLREML-LSGIEPNYVTIASVLPLCARVANLQHGKEFHC 536
Query: 459 SMQSNFGIEPSIEHYLCLVDLLGRAGR 485
M + + + LVD+ R+G+
Sbjct: 537 YMTRREDFKDHLLLWNALVDMYARSGK 563
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 74/285 (25%), Positives = 142/285 (49%), Gaps = 5/285 (1%)
Query: 181 VNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMR--RMSVTPDLVV--FLN 236
+ A+ F + + I S T + + + GN+ +AF + +R S + DL+V +
Sbjct: 120 LESAQETFTSVDASMIDSLLTSLKEFTSRGNLLDAFKTVSLIRLHASSASQDLIVHPISS 179
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
L+ C V +L +H ++ G+ L LV+ Y+ L A + +
Sbjct: 180 LLSSCTDVKSLAEGRQLHGHIISLGFEQHPILVPKLVTFYSAFNLLVDAHVITENSNILH 239
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEE 356
F W +I Y + G+ +A++ +K+++K +RP+ T + L AC E L GKE+ E
Sbjct: 240 PFPWNLLISSYVRNGFCQKALSAYKQMVKKGIRPDNFTYPSVLKACGEELDLGFGKEVHE 299
Query: 357 YIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQ 416
I + ++ + V +LI M+ KCG++ A+++F+++P++D W++MI+ YA GM ++
Sbjct: 300 SINASRIKWSLIVHNALISMYGKCGKVGIARDLFDKIPERDAVSWNSMISVYASMGMWNE 359
Query: 417 ALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQ 461
A LF M E ++ + +++ +I +G L M+
Sbjct: 360 AFELFGSMW-AEDIELNIIIWNTIAGGYLRTGNYKGALELLSQMR 403
>gi|297808809|ref|XP_002872288.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297318125|gb|EFH48547.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 690
Score = 335 bits (858), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 193/612 (31%), Positives = 325/612 (53%), Gaps = 18/612 (2%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVH-GNSFTFPLVLKACANINSIWDGKRVHSHVLKV 59
++ + N F +TL + +L + +SFT+P V+KA + + G+ +H+ V+K
Sbjct: 76 LVSGYSKNSMFHDTLKVFKRLLNCPICVPDSFTYPNVIKAYGALGREFLGRMIHTVVVKS 135
Query: 60 GFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAIL 119
G D V + L+ MY+K + F S +V DEMP R V SWN++IS+ + ++A+
Sbjct: 136 GHVCDVVVASSLVGMYAKFNLFEDSVQVFDEMPER--DVASWNTVISSFYQRGDAEKALE 193
Query: 120 VLKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMS-- 173
+ M E ++ + +S CS +G +H L E L V S
Sbjct: 194 LFGRMERSDFEPNSVSITVAISACSRLLCLERGKEIH-----RKYLKKEFELDEYVNSAL 248
Query: 174 --MYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDL 231
MY + + AR +F ++ S+V+W ++I GYV G+ L N+M P
Sbjct: 249 VDMYGRCDFLEMAREVFQQMRRKSLVAWNSMIRGYVARGDSKSCVELLNRMIIEGTRPSQ 308
Query: 232 VVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDA 291
++++ C++ NL +H +++S + + ++ L+ +Y KCG+++LA VF
Sbjct: 309 TTLTSILMACSRSRNLLHGKFVHGYVIRSVVDADIYINCSLIDLYFKCGEVKLAETVFLK 368
Query: 292 VLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKG 351
+ V W MI GY +G +AV+++ +++ V+P+ T + LS C++L +L KG
Sbjct: 369 TQKDVVESWNVMISGYVSVGNWFKAVDVYDQMVSVGVQPDIVTFTSVLSTCSQLAALEKG 428
Query: 352 KEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIH 411
K+I I + LE++ + ++L+ M+SKCG + +A +F +P KD+ W+ MI+ Y H
Sbjct: 429 KQIHLSISESRLETDELLLSALLDMYSKCGNVKEASRIFNSIPKKDVVSWTVMISAYGSH 488
Query: 412 GMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIE 471
G +AL F +MQ G+KPD V + ++LSAC H+G++D+G+ +F M+S +GIE SIE
Sbjct: 489 GQPREALYHFDEMQKF-GVKPDGVTFLAVLSACGHAGLIDEGVKYFSQMRSKYGIEASIE 547
Query: 472 HYLCLVDLLGRAGRFDLALKTIHEMP-VEVQAQVWAPLLSACMKHHNVELGEYAAKNLLT 530
Y CL+D+LGRAGR A + + P A++ + L AC H + LG AK L+
Sbjct: 548 QYSCLIDILGRAGRLLEAYGILQQKPETRDNAELLSTLFCACCLHRDHLLGYTIAKLLVE 607
Query: 531 LNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDR 590
P Y ++ NL+ S W A R M + + K+PG S +E++ V F A DR
Sbjct: 608 KYPDDASTYTVLFNLYASGESWDAAKRVRLKMKEVGMRKKPGCSWIEMNEKVCHFFAEDR 667
Query: 591 SHHLSVDIRKTL 602
SH + ++ + L
Sbjct: 668 SHPQAENVYECL 679
Score = 218 bits (555), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 141/485 (29%), Positives = 247/485 (50%), Gaps = 10/485 (2%)
Query: 36 VLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRL 95
+L+ C N S+ K VH +L VG + D + LI++Y C D S+R V + + +R
Sbjct: 9 LLRECTNTKSLRQAKLVHQRILTVGLRSDVVLCKSLINVYFACKDHCSARLVFENIDIR- 67
Query: 96 RSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSAS-TFVSVVS--GCSFRQ--GIS 150
V WNS++S +S+ + + + V K + + + S T+ +V+ G R+ G
Sbjct: 68 SDVYIWNSLVSGYSKNSMFHDTLKVFKRLLNCPICVPDSFTYPNVIKAYGALGREFLGRM 127
Query: 151 MHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVG 210
+H V K G + + + +A+S++ MYAKF ++ +FDE+ E + SW T+I + G
Sbjct: 128 IHTVVVKSGHVCD-VVVASSLVGMYAKFNLFEDSVQVFDEMPERDVASWNTVISSFYQRG 186
Query: 211 NVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDN 270
+ +A L +M R P+ V I C+++ L +H LK + ++ +++
Sbjct: 187 DAEKALELFGRMERSDFEPNSVSITVAISACSRLLCLERGKEIHRKYLKKEFELDEYVNS 246
Query: 271 LLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRP 330
LV MY +C LE+AR VF + KS+ W SMI GY G V L R++ RP
Sbjct: 247 ALVDMYGRCDFLEMAREVFQQMRRKSLVAWNSMIRGYVARGDSKSCVELLNRMIIEGTRP 306
Query: 331 NEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVF 390
++ TL + L AC+ +L GK + Y++ + ++++ + SLI ++ KCG + A+ VF
Sbjct: 307 SQTTLTSILMACSRSRNLLHGKFVHGYVIRSVVDADIYINCSLIDLYFKCGEVKLAETVF 366
Query: 391 ERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMV 450
+ + W+ MI+GY G +A++++ +M V G++PD V +TS+LS CS +
Sbjct: 367 LKTQKDVVESWNVMISGYVSVGNWFKAVDVYDQMVSV-GVQPDIVTFTSVLSTCSQLAAL 425
Query: 451 DDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLS 510
+ G S+ S +E L+D+ + G A + + +P + W ++S
Sbjct: 426 EKGKQIHLSI-SESRLETDELLLSALLDMYSKCGNVKEASRIFNSIP-KKDVVSWTVMIS 483
Query: 511 ACMKH 515
A H
Sbjct: 484 AYGSH 488
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 71/266 (26%), Positives = 136/266 (51%), Gaps = 6/266 (2%)
Query: 234 FLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAV- 292
L+L+ C +L A +H +L G ++ L L+++Y C D AR VF+ +
Sbjct: 6 LLSLLRECTNTKSLRQAKLVHQRILTVGLRSDVVLCKSLINVYFACKDHCSARLVFENID 65
Query: 293 LEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSV-RPNEATLATTLSACAELGSLSKG 351
+ V++W S++ GY++ + + +FKRLL + P+ T + A LG G
Sbjct: 66 IRSDVYIWNSLVSGYSKNSMFHDTLKVFKRLLNCPICVPDSFTYPNVIKAYGALGREFLG 125
Query: 352 KEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIH 411
+ I +V +G + V +SL+ M++K + +VF+ +P++D+A W+ +I+ +
Sbjct: 126 RMIHTVVVKSGHVCDVVVASSLVGMYAKFNLFEDSVQVFDEMPERDVASWNTVISSFYQR 185
Query: 412 GMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFF-KSMQSNFGIEPSI 470
G ++AL LF +M+ + +P++V T +SACS ++ G K ++ F ++ +
Sbjct: 186 GDAEKALELFGRMERSD-FEPNSVSITVAISACSRLLCLERGKEIHRKYLKKEFELDEYV 244
Query: 471 EHYLCLVDLLGRAGRFDLALKTIHEM 496
LVD+ GR ++A + +M
Sbjct: 245 NS--ALVDMYGRCDFLEMAREVFQQM 268
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 93/195 (47%), Gaps = 17/195 (8%)
Query: 333 ATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFER 392
+ L + L C SL + K + + I+ GL S+ + SLI+++ C A+ VFE
Sbjct: 4 SKLLSLLRECTNTKSLRQAKLVHQRILTVGLRSDVVLCKSLINVYFACKDHCSARLVFEN 63
Query: 393 VPDK-DLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVD 451
+ + D+ +W+++++GY+ + M L +F ++ + PD+ Y +++ A G +
Sbjct: 64 IDIRSDVYIWNSLVSGYSKNSMFHDTLKVFKRLLNCPICVPDSFTYPNVIKA---YGAL- 119
Query: 452 DGLSFFKSMQSNFGIEPSIEHYLCLV----DLLGRAGRFDL---ALKTIHEMPVEVQAQV 504
G F M ++ ++C V L+G +F+L +++ EMP E
Sbjct: 120 -GREFLGRMIHTVVVKSG---HVCDVVVASSLVGMYAKFNLFEDSVQVFDEMP-ERDVAS 174
Query: 505 WAPLLSACMKHHNVE 519
W ++S+ + + E
Sbjct: 175 WNTVISSFYQRGDAE 189
>gi|147805129|emb|CAN64485.1| hypothetical protein VITISV_035038 [Vitis vinifera]
Length = 1740
Score = 335 bits (858), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 191/576 (33%), Positives = 318/576 (55%), Gaps = 44/576 (7%)
Query: 50 KRVHSHV-LKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAH 108
K++HS + + + + L+ Y+ C + S+R + DE+P + +VV +N +I ++
Sbjct: 1044 KKLHSKICIDHDLHSNPSLGIKLMRAYAVCGEPWSTRHIFDEIPKK--NVVFFNVMIRSY 1101
Query: 109 SRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCSFRQ----GISMHCCVYKLGLLNNE 164
L +A+LV K M G++ T+ V+ S + G+ +H V ++GL N
Sbjct: 1102 VNNHLYSDALLVFKNMAGHGIDPDHYTYPCVLKASSGSEDLWVGMQIHAAVVRVGLDLN- 1160
Query: 165 IPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRR 224
+ + N ++SMY K G + EA + DZ+ +VSW +++ G G ++A +C +M
Sbjct: 1161 VFVGNGLISMYGKCGCLVEACRVLDZMPCRDVVSWNSLVAGCARNGQFDDALEVCKEMEL 1220
Query: 225 MSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGD-LE 283
+ + PD A +M SLL ++ C D +
Sbjct: 1221 LGLKPD-------------------AGTMASLL---------------PAVTNTCLDNVS 1246
Query: 284 LARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACA 343
+ +F + KS+ W MI Y P+EAV++F ++ +V P+ ++A+ L AC
Sbjct: 1247 FVKEMFMKLANKSLVSWNVMIAVYMNNSMPAEAVDIFLQMEDHAVDPDAISIASVLPACG 1306
Query: 344 ELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSA 403
+L +L G+ I EY+V L+ N ++ +LI M++KCG + A+EVF+++ +D+ W++
Sbjct: 1307 DLSALLLGRRIHEYVVRKRLQPNLLLENALIDMYAKCGCLEYAREVFDQMKFRDVVSWTS 1366
Query: 404 MINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSN 463
MI+ Y ++G G A++LF +MQ + GL PD++ + S+LSACSH+G++D+G +FK M
Sbjct: 1367 MISAYGMNGKGRDAVSLFSRMQDL-GLNPDSIAFVSVLSACSHAGLLDEGRYYFKLMTEE 1425
Query: 464 FGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEY 523
I P IEH++C+VDLLGRAG+ D A I +MP+E +VW LLSAC + N+ +G
Sbjct: 1426 CKIVPRIEHFVCMVDLLGRAGQVDEAYGFIKQMPMEPNERVWGALLSACRVYSNMIIGLL 1485
Query: 524 AAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQ 583
AA L L P +G Y+L++N++ AG W++ T R +M + + K PG S E+D V
Sbjct: 1486 AADQLFQLCPEQSGYYVLLSNIYAKAGRWEDVTTVRSIMKTKGIKKMPGVSNFELDNRVH 1545
Query: 584 VFVAGDRSHHLSVDIRKTLKELHIKLLEAGYIAEAD 619
F+AGD+SH S I + L L K+ EAGY+ E D
Sbjct: 1546 TFLAGDQSHPQSKQIYEELDVLVGKMKEAGYVPETD 1581
Score = 198 bits (503), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 123/417 (29%), Positives = 209/417 (50%), Gaps = 42/417 (10%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MIR+ NN + + L + +M G+ + +T+P VLKA + +W G ++H+ V++VG
Sbjct: 1097 MIRSYVNNHLYSDALLVFKNMAGHGIDPDHYTYPCVLKASSGSEDLWVGMQIHAAVVRVG 1156
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+ FV GLI MY KC V + +VLDZMP R VVSWNS+++ +R D+A+ V
Sbjct: 1157 LDLNVFVGNGLISMYGKCGCLVEACRVLDZMPC--RDVVSWNSLVAGCARNGQFDDALEV 1214
Query: 121 LKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGK 180
KEM +LGL+ A T S++ ++ C L+N
Sbjct: 1215 CKEMELLGLKPDAGTMASLLP------AVTNTC-------LDN----------------- 1244
Query: 181 VNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILG 240
V+ + +F ++ S+VSW +I Y+N EA + QM +V PD + +++
Sbjct: 1245 VSFVKEMFMKLANKSLVSWNVMIAVYMNNSMPAEAVDIFLQMEDHAVDPDAISIASVLPA 1304
Query: 241 CAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLW 300
C + L L +H +++ L+N L+ MY KCG LE AR VFD + + V W
Sbjct: 1305 CGDLSALLLGRRIHEYVVRKRLQPNLLLENALIDMYAKCGCLEYAREVFDQMKFRDVVSW 1364
Query: 301 TSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKE-----IE 355
TSMI Y G +AV+LF R+ + P+ + LSAC+ G L +G+ E
Sbjct: 1365 TSMISAYGMNGKGRDAVSLFSRMQDLGLNPDSIAFVSVLSACSHAGLLDEGRYYFKLMTE 1424
Query: 356 EYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVP-DKDLAVWSAMINGYAIH 411
E ++ +E ++ + + G++++A +++P + + VW A+++ ++
Sbjct: 1425 ECKIVPRIEHF----VCMVDLLGRAGQVDEAYGFIKQMPMEPNERVWGALLSACRVY 1477
>gi|326495618|dbj|BAJ85905.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 788
Score = 335 bits (858), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 182/594 (30%), Positives = 322/594 (54%), Gaps = 15/594 (2%)
Query: 29 NSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQ-DAFVQTGLIDMYSKCSDFVSSRKV 87
+ FTFP+VLK CA + ++ +G+ HS +++G D + L+ Y++ + +V
Sbjct: 107 DRFTFPVVLKCCARLGALDEGRAAHSAAIRLGVAAADVYTGNSLLAFYARLGLVDDAERV 166
Query: 88 LDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMW-VLGLELSASTFVSVVSGC--- 143
D MP R VV+WNS++ + L A++ +EM L ++ ++ ++ C
Sbjct: 167 FDGMPAR--DVVTWNSMVDGYVSNGLGTLALVCFREMHEALEVQHDGVGIIAALAACCLE 224
Query: 144 -SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTI 202
+ QG +H V + G+ +++ + S++ MY K G + A +F + ++V+W +
Sbjct: 225 SALMQGREVHAYVIRHGM-EHDVKVGTSILDMYCKCGDIASAEGVFATMPSRTVVTWNCM 283
Query: 203 IGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGY 262
IGGY EAF QM+ ++V +NL+ CAQ + S+H + + +
Sbjct: 284 IGGYALNERPEEAFDCFVQMKAEGHQVEVVTAINLLAACAQTESSLYGRSVHGYITRRQF 343
Query: 263 NNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKR 322
L+ L+ MY+K G ++ + +VF + K++ W +MI Y EA+ LF
Sbjct: 344 LPHVVLETALLEMYSKVGKVKSSEKVFGQMTTKTLVSWNNMIAAYMYKEMYMEAITLFLD 403
Query: 323 LLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGR 382
LL + P+ T++ + A LG L + +++ YI+ G N + +++HM+++CG
Sbjct: 404 LLNQPLYPDYFTMSAVVPAFVLLGLLRQCRQMHSYIIRLGYGENTLIMNAIMHMYARCGD 463
Query: 383 INKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILS 442
+ ++E+F+++ KD+ W+ MI GYAIHG G AL +F +M+ GL+P+ + S+L+
Sbjct: 464 VLSSREIFDKMAAKDVISWNTMIMGYAIHGQGRSALEMFSEMK-CNGLRPNESTFVSVLT 522
Query: 443 ACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQA 502
ACS SG+ D+G + F SMQ ++G+ P IEHY C+ DLLGRAG ++ I MP++
Sbjct: 523 ACSVSGLTDEGWTQFNSMQRDYGMIPQIEHYGCMTDLLGRAGDLKEVMQFIENMPIDPTF 582
Query: 503 QVWAPLLSACMKHHNVELGEYAAKNLLTLNP-----GSTGNYILMANLFTSAGMWKEAAT 557
+VW LL+A +++++ EYAA+ + L +TG Y+L+++++ AG WK+
Sbjct: 583 RVWGSLLTASRNRNDIDIAEYAAERIFQLEQDQLEHDNTGCYVLISSMYADAGRWKDVER 642
Query: 558 ARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKELHIKLLE 611
+ LM+++ L + S VE+ G FV GD +H S I++ L K+ E
Sbjct: 643 IKSLMEEKGLRRTDPRSIVELHGISCSFVNGDTTHPQSKMIQEVSNFLSGKIGE 696
Score = 122 bits (305), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 75/275 (27%), Positives = 139/275 (50%), Gaps = 3/275 (1%)
Query: 175 YAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVF 234
+A G++++A+ G +I G + G A M PD F
Sbjct: 52 HAAAGRMDDAQEALAAAGSRDAFLHNVVIRGLADAGLPGAALAAYAAMLAAGARPDRFTF 111
Query: 235 LNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLD-NLLVSMYTKCGDLELARRVFDAVL 293
++ CA++G L + HS ++ G D N L++ Y + G ++ A RVFD +
Sbjct: 112 PVVLKCCARLGALDEGRAAHSAAIRLGVAAADVYTGNSLLAFYARLGLVDDAERVFDGMP 171
Query: 294 EKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKT-SVRPNEATLATTLSACAELGSLSKGK 352
+ V W SM+ GY G + A+ F+ + + V+ + + L+AC +L +G+
Sbjct: 172 ARDVVTWNSMVDGYVSNGLGTLALVCFREMHEALEVQHDGVGIIAALAACCLESALMQGR 231
Query: 353 EIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHG 412
E+ Y++ +G+E + +V TS++ M+ KCG I A+ VF +P + + W+ MI GYA++
Sbjct: 232 EVHAYVIRHGMEHDVKVGTSILDMYCKCGDIASAEGVFATMPSRTVVTWNCMIGGYALNE 291
Query: 413 MGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHS 447
++A + F +M+ EG + + V ++L+AC+ +
Sbjct: 292 RPEEAFDCFVQMK-AEGHQVEVVTAINLLAACAQT 325
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 87/174 (50%), Gaps = 1/174 (0%)
Query: 272 LVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPN 331
LV + G ++ A+ A + FL +I G A G P A+ + +L RP+
Sbjct: 48 LVLSHAAAGRMDDAQEALAAAGSRDAFLHNVVIRGLADAGLPGAALAAYAAMLAAGARPD 107
Query: 332 EATLATTLSACAELGSLSKGKEIEEYIVLNGL-ESNRQVQTSLIHMFSKCGRINKAKEVF 390
T L CA LG+L +G+ + G+ ++ SL+ +++ G ++ A+ VF
Sbjct: 108 RFTFPVVLKCCARLGALDEGRAAHSAAIRLGVAAADVYTGNSLLAFYARLGLVDDAERVF 167
Query: 391 ERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSAC 444
+ +P +D+ W++M++GY +G+G AL F +M ++ D V + L+AC
Sbjct: 168 DGMPARDVVTWNSMVDGYVSNGLGTLALVCFREMHEALEVQHDGVGIIAALAAC 221
>gi|224124484|ref|XP_002319343.1| predicted protein [Populus trichocarpa]
gi|222857719|gb|EEE95266.1| predicted protein [Populus trichocarpa]
Length = 848
Score = 335 bits (858), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 193/617 (31%), Positives = 333/617 (53%), Gaps = 8/617 (1%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI NG +E +L Y V S +F L AC + G +VH ++K+G
Sbjct: 227 MIGGFGENGLWENSLEVYLLAKNENVKLVSASFTSTLSACCQGEFVSFGMQVHCDLVKLG 286
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F+ D +V T L+ MYSKC + V D++ V+ + WN++ISA+ + + + +
Sbjct: 287 FENDPYVCTSLLTMYSKCKLVEDAENVFDQVSVKKTEL--WNAMISAYVGNGRSYDGLKI 344
Query: 121 LKEMWVLGLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
K+M VL + + T +V+S C S+ G +H + K + +N + L +++++MY+
Sbjct: 345 YKQMKVLQIPPDSLTATNVLSSCCLVGSYDFGRLIHAELVKRPIQSN-VALQSALLTMYS 403
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K G ++A SIF+ I +V+W ++I G+ EA N M PD + +
Sbjct: 404 KCGNSDDANSIFNTIKGRDVVAWGSMISGFCQNRKYMEALEFYNSMTVYGEKPDSDIMAS 463
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
++ C + N+ L ++H L +KSG + + + LV MY+K +++ VF + K+
Sbjct: 464 VVSACTGLKNVNLGCTIHGLAIKSGLEQDVFVASSLVDMYSKFNFPKMSGNVFSDMPLKN 523
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEE 356
+ W S+I Y + G P +++LF ++ + + P+ ++ + L + + + L KGK +
Sbjct: 524 LVAWNSIISCYCRNGLPDLSISLFSQMTQYGLFPDSVSITSVLVSVSSVAVLRKGKAVHG 583
Query: 357 YIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQ 416
Y++ + S+ Q++ +LI M+ KCG + A+ +F+ + +L W+ MI G HG +
Sbjct: 584 YLIRQRIPSDLQLENALIDMYIKCGFLKYAQHIFQNMLQTNLVTWNIMIAGCGSHGDWLK 643
Query: 417 ALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCL 476
A++LF +M+ G+ PD + + S+L++C+H G +++GL F+ M GIEP +EHY+ +
Sbjct: 644 AMSLFDEMRSF-GIAPDDITFISLLTSCNHCGFIEEGLKLFQLMTVEHGIEPRMEHYVNI 702
Query: 477 VDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGST 536
VDLLGRAGR D A + +P+E +W LL +C HHNVELG+ AA LL + P
Sbjct: 703 VDLLGRAGRLDDAYAFVKNLPIEPDRSIWLSLLCSCRVHHNVELGKLAAHKLLDIEPSRG 762
Query: 537 GNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSV 596
NY+ + NL+ + AA R M ++ L K PG S +E+ S+ VF +GD S ++
Sbjct: 763 SNYVQLLNLYGENELQDRAANLRASMKEKGLKKTPGCSWIEVGNSIDVFFSGDSSSPRTI 822
Query: 597 DIRKTLKELHIKLLEAG 613
+I L L + + G
Sbjct: 823 EIYDLLNSLRRNMRKKG 839
Score = 195 bits (495), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 133/497 (26%), Positives = 243/497 (48%), Gaps = 11/497 (2%)
Query: 9 GSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG-FQQDAFV 67
G + + L YS + ++ FT+P +LKAC ++++ GK +HS ++ G F D ++
Sbjct: 31 GQYVDALQFYS---RNPLNATRFTYPSLLKACGFLSNLQYGKTIHSTIITKGFFYSDPYI 87
Query: 68 QTGLIDMYSKCSDFVSSRKVLDEMP---VRLRSVVSWNSIISAHSRACLNDEAILVLKEM 124
T LI+ Y KC F ++ KV D++P V + V WNSI++ + R E I M
Sbjct: 88 TTSLINFYFKCGSFGNAVKVFDKLPESEVSGQDVTFWNSIVNGYFRFGHKKEGIAQFCRM 147
Query: 125 WVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGLLNNEIP-LANSVMSMYAKFGKVNE 183
+ G+ A + ++ G + Y + + P L + ++ MY G+ +
Sbjct: 148 QLFGVRPDAYSLCILLGASDGHLGYAKQIHGYSVRKVFYGDPFLESGLIYMYFSCGRPLD 207
Query: 184 ARSIFDEIGET-SIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCA 242
A +F E+ + ++V+W +IGG+ G + + + +V F + + C
Sbjct: 208 AWRLFKELEDKGNVVAWNVMIGGFGENGLWENSLEVYLLAKNENVKLVSASFTSTLSACC 267
Query: 243 QVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTS 302
Q + + +H L+K G+ N+ + L++MY+KC +E A VFD V K LW +
Sbjct: 268 QGEFVSFGMQVHCDLVKLGFENDPYVCTSLLTMYSKCKLVEDAENVFDQVSVKKTELWNA 327
Query: 303 MIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNG 362
MI Y G + + ++K++ + P+ T LS+C +GS G+ I +V
Sbjct: 328 MISAYVGNGRSYDGLKIYKQMKVLQIPPDSLTATNVLSSCCLVGSYDFGRLIHAELVKRP 387
Query: 363 LESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFY 422
++SN +Q++L+ M+SKCG + A +F + +D+ W +MI+G+ + +AL FY
Sbjct: 388 IQSNVALQSALLTMYSKCGNSDDANSIFNTIKGRDVVAWGSMISGFCQNRKYMEALE-FY 446
Query: 423 KMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGR 482
V G KPD+ + S++SAC+ V+ G + + G+E + LVD+ +
Sbjct: 447 NSMTVYGEKPDSDIMASVVSACTGLKNVNLGCT-IHGLAIKSGLEQDVFVASSLVDMYSK 505
Query: 483 AGRFDLALKTIHEMPVE 499
++ +MP++
Sbjct: 506 FNFPKMSGNVFSDMPLK 522
>gi|302799994|ref|XP_002981755.1| hypothetical protein SELMODRAFT_115083 [Selaginella moellendorffii]
gi|300150587|gb|EFJ17237.1| hypothetical protein SELMODRAFT_115083 [Selaginella moellendorffii]
Length = 673
Score = 335 bits (858), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 185/591 (31%), Positives = 320/591 (54%), Gaps = 17/591 (2%)
Query: 31 FTFPL---VLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKV 87
T PL +++ CAN +S+ G+ +H+H+L+ G+ + F+ L++MY KC + V
Sbjct: 8 ITVPLYESLIRRCANPHSLEAGRSIHAHILRHGYGGERFLLNSLVEMYCKCDSLRDATAV 67
Query: 88 LDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCSFRQ 147
E+ R R WN +I+A+++ + E+I + + M G++ +A T VSV+ C+ +
Sbjct: 68 F-ELVARERIAFPWNILIAANAQRGQSRESIALYRRMSCEGVKPNAITLVSVLGACANLE 126
Query: 148 GISMHCCVYKLGLLNN-----EIPL------ANSVMSMYAKFGKVNEARSIFDEIGETSI 196
+ +++ +L E P+ A ++++MY + G V +AR++F+ I +
Sbjct: 127 DLKTGREIHRSHVLGGRSRPYERPMPVDAVMATALVTMYGRCGSVADARAVFEGICGRDL 186
Query: 197 VSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSL 256
+W ++ Y G + +A + +M V P F+ ++ C VG L A S+H+
Sbjct: 187 AAWNAMVAAYSRNGQMAQAVLVLRRMAVEGVRPGEGTFVGMLSWCCTVGALDEARSIHAH 246
Query: 257 LLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEA 316
+L +G + + LVSMY +CG L A F + +K + W +MI YAQ G+ ++
Sbjct: 247 ILATGLESRPTVGTTLVSMYGRCGSLGGAVCAFQRIRDKDIVAWNAMIAAYAQSGHSRDS 306
Query: 317 VNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHM 376
+ ++ + VR ++ TL L AC+ L SK + + IV G+E + + T+L++
Sbjct: 307 IRIYHVMDLEGVRVDKVTLIGVLDACSSLALTSKTRLVHARIVDTGVELDVVLGTALVNA 366
Query: 377 FSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVV 436
+++ G + A VF + ++++A WSAM+ YA G D++L ++ +MQ ++GL+P+ +
Sbjct: 367 YARGGHLVDADLVFAEMEERNVATWSAMVAAYAQTGHPDRSLEMYREMQ-LQGLRPNYIT 425
Query: 437 YTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEM 496
Y SIL AC+H+G++D GL +F SM ++GIE EH C+VDLLGR+GR D A + +
Sbjct: 426 YVSILFACNHAGLLDHGLDYFASMGRDYGIESCEEHCSCIVDLLGRSGRLDEAEALMASV 485
Query: 497 PVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAA 556
P + W LL AC H +VE G A+ + G Y+ ++N++ GMW E +
Sbjct: 486 PYRLGISAWMCLLGACRTHGDVERGARVARRAFQVESGEVAPYVALSNMYAGHGMWDEVS 545
Query: 557 TARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKELHI 607
R LM + L K G S VEIDG + F+ GD +H I+ + EL +
Sbjct: 546 RVRQLMAN-TLDKSTGKSFVEIDGRLHEFIQGDETHPEKDSIQAKILELEL 595
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 119/477 (24%), Positives = 230/477 (48%), Gaps = 20/477 (4%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVH-SHVL-- 57
+I + G E+++ Y M GV N+ T VL ACAN+ + G+ +H SHVL
Sbjct: 83 LIAANAQRGQSRESIALYRRMSCEGVKPNAITLVSVLGACANLEDLKTGREIHRSHVLGG 142
Query: 58 -----KVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRAC 112
+ DA + T L+ MY +C +R V + + R + +WN++++A+SR
Sbjct: 143 RSRPYERPMPVDAVMATALVTMYGRCGSVADARAVFE--GICGRDLAAWNAMVAAYSRNG 200
Query: 113 LNDEAILVLKEMWVLGLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLA 168
+A+LVL+ M V G+ TFV ++S C + + S+H + G L + +
Sbjct: 201 QMAQAVLVLRRMAVEGVRPGEGTFVGMLSWCCTVGALDEARSIHAHILATG-LESRPTVG 259
Query: 169 NSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVT 228
+++SMY + G + A F I + IV+W +I Y G+ ++ + + M V
Sbjct: 260 TTLVSMYGRCGSLGGAVCAFQRIRDKDIVAWNAMIAAYAQSGHSRDSIRIYHVMDLEGVR 319
Query: 229 PDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRV 288
D V + ++ C+ + +H+ ++ +G + L LV+ Y + G L A V
Sbjct: 320 VDKVTLIGVLDACSSLALTSKTRLVHARIVDTGVELDVVLGTALVNAYARGGHLVDADLV 379
Query: 289 FDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSL 348
F + E++V W++M+ YAQ G+P ++ +++ + +RPN T + L AC G L
Sbjct: 380 FAEMEERNVATWSAMVAAYAQTGHPDRSLEMYREMQLQGLRPNYITYVSILFACNHAGLL 439
Query: 349 SKGKEIEEYIVLN-GLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDK-DLAVWSAMIN 406
G + + + G+ES + + ++ + + GR+++A+ + VP + ++ W ++
Sbjct: 440 DHGLDYFASMGRDYGIESCEEHCSCIVDLLGRSGRLDEAEALMASVPYRLGISAWMCLLG 499
Query: 407 GYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSN 463
HG ++ + + VE + Y ++ + + GM D+ +S + + +N
Sbjct: 500 ACRTHGDVERGARVARRAFQVE--SGEVAPYVALSNMYAGHGMWDE-VSRVRQLMAN 553
>gi|225456517|ref|XP_002281018.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 624
Score = 335 bits (858), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 193/572 (33%), Positives = 310/572 (54%), Gaps = 11/572 (1%)
Query: 51 RVHSHVLKVGFQQDAFVQTGLIDM-YSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHS 109
++ SH + G +D V + L+ S DF SR + + + +V SWN + A+S
Sbjct: 46 QILSHAIASGVFRDPVVSSKLLYYSLSHDHDFAFSRTLFFQ--IHKPNVFSWNFMFRAYS 103
Query: 110 RACLNDEAILVLKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEI 165
R+ E I + M G +F V+ C+ +G +H KLG+ + ++
Sbjct: 104 RSSFPAETIALYNLMLRNGTLPDNYSFPFVLKACARLSLLHKGREIHSSTLKLGV-HLDV 162
Query: 166 PLANSVMSMYAKFGKVNEARSIFDEIGE--TSIVSWTTIIGGYVNVGNVNEAFGLCNQMR 223
+ N+++S ++ G V AR++FD + +VSW ++I GY+ A + ++
Sbjct: 163 FVQNALISAFSSCGAVEAARAVFDMLPALVRDVVSWNSMISGYLQSHRYELALKVFWELL 222
Query: 224 -RMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDL 282
S++PD V ++ + C ++G L L +H L SG+ + + + L+ MY+KCG +
Sbjct: 223 GDGSLSPDEVTLVSALSVCGRLGLLDLGKKIHGLFTGSGFVLDVFVGSSLIDMYSKCGQI 282
Query: 283 ELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSAC 342
E AR+VFD + ++ WTSMI GYAQ EA+ LF+ + + AT+A LSAC
Sbjct: 283 EDARKVFDRIPHRNTVCWTSMIAGYAQSDLFKEAIELFREMQIGGFAADAATIACVLSAC 342
Query: 343 AELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWS 402
G+L++G+ I Y N +E + + +LI M+SKCG I KA E+F + D+ WS
Sbjct: 343 GHWGALAQGRWIHLYCERNSIEMDLNARNALIGMYSKCGDIQKALEIFHGLTQPDIFSWS 402
Query: 403 AMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQS 462
A+I+G A++G D+AL+LF +M+ + ++P+ + + +L AC+H G VD GL +F +M
Sbjct: 403 AVISGLAMNGESDKALHLFSQMEMISDIRPNEITFLGVLCACNHGGFVDKGLYYFNAMTQ 462
Query: 463 NFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGE 522
+ + P IEHY C+VDLLGRA A K I +P++ +W LL AC H N+EL E
Sbjct: 463 IYNLTPGIEHYGCMVDLLGRANLLVEAEKFIRTLPIQPDVVIWRSLLFACRNHGNIELAE 522
Query: 523 YAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSV 582
+AAK + L P G +L++N++ SA W + R M +R+ K+PG S VEIDG V
Sbjct: 523 FAAKQIEELEPRRCGARVLLSNVYASASRWGDVKRVRKDMATQRIKKQPGCSFVEIDGLV 582
Query: 583 QVFVAGDRSHHLSVDIRKTLKELHIKLLEAGY 614
DRSH I +T+ ++ L G+
Sbjct: 583 HELFVADRSHPEMGAIYETMISINKALQSKGF 614
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 129/445 (28%), Positives = 218/445 (48%), Gaps = 22/445 (4%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
M R + + ET++ Y+ ML+ G ++++FP VLKACA ++ + G+ +HS LK+G
Sbjct: 98 MFRAYSRSSFPAETIALYNLMLRNGTLPDNYSFPFVLKACARLSLLHKGREIHSSTLKLG 157
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
D FVQ LI +S C ++R V D +P +R VVSWNS+IS + ++ + A+ V
Sbjct: 158 VHLDVFVQNALISAFSSCGAVEAARAVFDMLPALVRDVVSWNSMISGYLQSHRYELALKV 217
Query: 121 LKEMWVLG-LELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMY 175
E+ G L T VS +S C G +H G + ++ + +S++ MY
Sbjct: 218 FWELLGDGSLSPDEVTLVSALSVCGRLGLLDLGKKIHGLFTGSGFV-LDVFVGSSLIDMY 276
Query: 176 AKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFL 235
+K G++ +AR +FD I + V WT++I GY EA L +M+ D
Sbjct: 277 SKCGQIEDARKVFDRIPHRNTVCWTSMIAGYAQSDLFKEAIELFREMQIGGFAADAATIA 336
Query: 236 NLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEK 295
++ C G L +H ++ + N L+ MY+KCGD++ A +F + +
Sbjct: 337 CVLSACGHWGALAQGRWIHLYCERNSIEMDLNARNALIGMYSKCGDIQKALEIFHGLTQP 396
Query: 296 SVFLWTSMIGGYAQLGYPSEAVNLFKRL-LKTSVRPNEATLATTLSACAELGSLSKGKEI 354
+F W+++I G A G +A++LF ++ + + +RPNE T L AC G + KG
Sbjct: 397 DIFSWSAVISGLAMNGESDKALHLFSQMEMISDIRPNEITFLGVLCACNHGGFVDKG--- 453
Query: 355 EEYIVLNGLESNRQVQTSLIH---MFSKCGRIN---KAKEVFERVP-DKDLAVWSAMING 407
N + + + H M GR N +A++ +P D+ +W +++
Sbjct: 454 --LYYFNAMTQIYNLTPGIEHYGCMVDLLGRANLLVEAEKFIRTLPIQPDVVIWRSLL-- 509
Query: 408 YAIHGMGDQALNLFYKMQHVEGLKP 432
+A G+ L F Q +E L+P
Sbjct: 510 FACRNHGNIELAEFAAKQ-IEELEP 533
>gi|302807080|ref|XP_002985271.1| hypothetical protein SELMODRAFT_121697 [Selaginella moellendorffii]
gi|300147099|gb|EFJ13765.1| hypothetical protein SELMODRAFT_121697 [Selaginella moellendorffii]
Length = 744
Score = 334 bits (857), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 205/629 (32%), Positives = 325/629 (51%), Gaps = 20/629 (3%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI G + L + M GV N+ TF VL ACA++ +I GK +H ++ G
Sbjct: 29 MIAAYAQRGHPADALELFVRMDHEGVKANAITFVSVLDACASLGAIALGKSIHERIVADG 88
Query: 61 F-QQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAIL 119
D + +++MY KC + +R+V + M + + V+WN++I+A SR EA
Sbjct: 89 LLGDDVILGNTIVNMYGKCGEVDLAREVFERMEAK--NTVTWNTMIAACSRHDRYKEAFA 146
Query: 120 VLKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGL---LNNEIPLANSVMSMYA 176
+L EM + GL + T VSV+ C++ Q IS V+++ L ++ +AN+++++Y
Sbjct: 147 LLGEMDLDGLRPNKITLVSVIDACAWMQSISRGRIVHEIVAGEGLESDNAVANALVNLYG 206
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K GK+ AR + I +SWTT++ Y G+ A + +M V D F+N
Sbjct: 207 KCGKLRAARHALEGIETRDKISWTTLLAAYARHGHGKRAIAVIKRMDHEGVKLDSFTFVN 266
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLE-K 295
L+ C + L L +H L +SG + L LV MY KCG+ + ARR FD + + +
Sbjct: 267 LLESCVAIAALALGEEIHDRLAESGIELDPVLQTALVDMYGKCGNPDAARRAFDRMRDVR 326
Query: 296 SVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIE 355
V +W +++ Y E + +F R+ V P+ T + L ACA L +L G+
Sbjct: 327 DVTVWNALLAAYVLRDQGKETLGIFARMSLQGVAPDAVTFLSILDACASLAALGLGRLTH 386
Query: 356 EYIVLNGLESNRQV------QTSLIHMFSKCGRINKAKEVF---ERVPDKDLAVWSAMIN 406
++ GL + V TS+I+M++KCG + AK F R D+ WSAM+
Sbjct: 387 SRMLERGLFDRQAVASADLLTTSVINMYAKCGSLADAKAEFAKARRARASDVVAWSAMVA 446
Query: 407 GYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGI 466
Y+ G+ ++AL FY MQ EG+KPD+V + S ++ CSHSG+V + ++FF S++ + GI
Sbjct: 447 AYSQFGLSEEALRCFYSMQQ-EGVKPDSVSFVSAIAGCSHSGLVREAVAFFTSLRHDHGI 505
Query: 467 EPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAK 526
P+ H+ CLVDLL RAG A + P+ W LLSAC + ++E A
Sbjct: 506 APTEAHFACLVDLLSRAGWIREAEALMRRAPLGAHHSTWMTLLSACRTYGDLERARRVAA 565
Query: 527 NLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFV 586
L +L GS Y L+A++F + W + AR + +R +PG S +EI+ V F
Sbjct: 566 RLASLRSGSA--YSLLASVFCLSRKWDDVRNARQSLVERGFITQPGCSWIEINNRVYEFF 623
Query: 587 AG-DRSHHLSVDIRKTLKELHIKLLEAGY 614
AG DR +I L+ L +++ +AGY
Sbjct: 624 AGDDRLLPREEEIFAELERLCVEIRKAGY 652
Score = 221 bits (564), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 118/397 (29%), Positives = 222/397 (55%), Gaps = 19/397 (4%)
Query: 74 MYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSA 133
MY++C + +R+ D M VR +VVSW+++I+A+++ +A+ + M G++ +A
Sbjct: 1 MYNRCGSVIHARRAFDAMVVR--NVVSWSAMIAAYAQRGHPADALELFVRMDHEGVKANA 58
Query: 134 STFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFD 189
TFVSV+ C+ G S+H + GLL +++ L N++++MY K G+V+ AR +F+
Sbjct: 59 ITFVSVLDACASLGAIALGKSIHERIVADGLLGDDVILGNTIVNMYGKCGEVDLAREVFE 118
Query: 190 EIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFL 249
+ + V+W T+I EAF L +M + P+ + +++I CA + ++
Sbjct: 119 RMEAKNTVTWNTMIAACSRHDRYKEAFALLGEMDLDGLRPNKITLVSVIDACAWMQSISR 178
Query: 250 ALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQ 309
+H ++ G +++ + N LV++Y KCG L AR + + + WT+++ YA+
Sbjct: 179 GRIVHEIVAGEGLESDNAVANALVNLYGKCGKLRAARHALEGIETRDKISWTTLLAAYAR 238
Query: 310 LGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQV 369
G+ A+ + KR+ V+ + T L +C + +L+ G+EI + + +G+E + +
Sbjct: 239 HGHGKRAIAVIKRMDHEGVKLDSFTFVNLLESCVAIAALALGEEIHDRLAESGIELDPVL 298
Query: 370 QTSLIHMFSKCGRINKAKEVFERVPD-KDLAVWSAMINGYAIHGMGDQALNLFYKMQHVE 428
QT+L+ M+ KCG + A+ F+R+ D +D+ VW+A++ Y + G + L +F +M ++
Sbjct: 299 QTALVDMYGKCGNPDAARRAFDRMRDVRDVTVWNALLAAYVLRDQGKETLGIFARMS-LQ 357
Query: 429 GLKPDAVVYTSILSAC-----------SHSGMVDDGL 454
G+ PDAV + SIL AC +HS M++ GL
Sbjct: 358 GVAPDAVTFLSILDACASLAALGLGRLTHSRMLERGL 394
>gi|356519887|ref|XP_003528600.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Glycine max]
Length = 813
Score = 334 bits (857), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 202/598 (33%), Positives = 328/598 (54%), Gaps = 13/598 (2%)
Query: 8 NGSFEETLSTYSSML--QTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDA 65
+G +EE L + M+ + G+ + T VL CA + VH + LKVG
Sbjct: 216 HGFYEEALGFFRVMVAAKPGIQPDLVTVVSVLPVCAETEDKVMARIVHCYALKVGLLGGH 275
Query: 66 F-VQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEM 124
V L+D+Y KC +S+KV DE + R+V+SWN+II++ S +A+ V + M
Sbjct: 276 VKVGNALVDVYGKCGSEKASKKVFDE--IDERNVISWNAIITSFSFRGKYMDALDVFRLM 333
Query: 125 WVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGK 180
G+ ++ T S++ F+ G+ +H K+ + +++ ++NS++ MYAK G
Sbjct: 334 IDEGMRPNSVTISSMLPVLGELGLFKLGMEVHGFSLKMAI-ESDVFISNSLIDMYAKSGS 392
Query: 181 VNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILG 240
A +IF+++G +IVSW +I + EA L QM+ TP+ V F N++
Sbjct: 393 SRIASTIFNKMGVRNIVSWNAMIANFARNRLEYEAVELVRQMQAKGETPNNVTFTNVLPA 452
Query: 241 CAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLW 300
CA++G L + +H+ +++ G + + + N L MY+KCG L LA+ VF+ + V +
Sbjct: 453 CARLGFLNVGKEIHARIIRVGSSLDLFVSNALTDMYSKCGCLNLAQNVFNISVRDEV-SY 511
Query: 301 TSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVL 360
+I GY++ E++ LF + +RP+ + +SACA L + +GKEI +V
Sbjct: 512 NILIIGYSRTNDSLESLRLFSEMRLLGMRPDIVSFMGVVSACANLAFIRQGKEIHGLLVR 571
Query: 361 NGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNL 420
++ V SL+ ++++CGRI+ A +VF + +KD+A W+ MI GY + G D A+NL
Sbjct: 572 KLFHTHLFVANSLLDLYTRCGRIDLATKVFYCIQNKDVASWNTMILGYGMRGELDTAINL 631
Query: 421 FYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLL 480
F M+ +G++ D+V + ++LSACSH G+++ G +FK M + IEP+ HY C+VDLL
Sbjct: 632 FEAMKE-DGVEYDSVSFVAVLSACSHGGLIEKGRKYFK-MMCDLNIEPTHTHYACMVDLL 689
Query: 481 GRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYI 540
GRAG + A I + + +W LL AC H N+ELG +AA++L L P G YI
Sbjct: 690 GRAGLMEEAADLIRGLSIIPDTNIWGALLGACRIHGNIELGLWAAEHLFELKPQHCGYYI 749
Query: 541 LMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDI 598
L++N++ A W EA R LM R K PG S V++ V F+ G++ L D
Sbjct: 750 LLSNMYAEAERWDEANKVRELMKSRGAKKNPGCSWVQVGDLVHAFLVGEKIDSLDDDF 807
Score = 239 bits (611), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 176/608 (28%), Positives = 286/608 (47%), Gaps = 58/608 (9%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+IR ++ G F+ TY++M++ GV + T+P VLK C++ + G+ VH K+G
Sbjct: 109 LIRANSIAGVFD-GFGTYNTMVRAGVKPDECTYPFVLKVCSDFVEVRKGREVHGVAFKLG 167
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F D FV L+ Y C F + KV DEMP R + VSWN++I S +EA+
Sbjct: 168 FDGDVFVGNTLLAFYGNCGLFGDAMKVFDEMPERDK--VSWNTVIGLCSLHGFYEEALGF 225
Query: 121 LKEMWVL--GLELSASTFVSVVSGCSFRQGISM----HCCVYKLGLLNNEIPLANSVMSM 174
+ M G++ T VSV+ C+ + M HC K+GLL + + N+++ +
Sbjct: 226 FRVMVAAKPGIQPDLVTVVSVLPVCAETEDKVMARIVHCYALKVGLLGGHVKVGNALVDV 285
Query: 175 YAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVF 234
Y K G ++ +FDEI E +++SW II + G +A + M + P+ V
Sbjct: 286 YGKCGSEKASKKVFDEIDERNVISWNAIITSFSFRGKYMDALDVFRLMIDEGMRPNSVTI 345
Query: 235 LNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLE 294
+++ ++G L + +H LK ++ + N L+ MY K G +A +F+ +
Sbjct: 346 SSMLPVLGELGLFKLGMEVHGFSLKMAIESDVFISNSLIDMYAKSGSSRIASTIFNKMGV 405
Query: 295 KSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEI 354
+++ W +MI +A+ EAV L +++ PN T L ACA LG L+ GKEI
Sbjct: 406 RNIVSWNAMIANFARNRLEYEAVELVRQMQAKGETPNNVTFTNVLPACARLGFLNVGKEI 465
Query: 355 EEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMG 414
I+ G + V +L M+SKCG +N A+ VF + +D ++ +I GY+
Sbjct: 466 HARIIRVGSSLDLFVSNALTDMYSKCGCLNLAQNVFN-ISVRDEVSYNILIIGYSRTNDS 524
Query: 415 DQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDD-----GLSFFKSMQSNFGIEPS 469
++L LF +M+ + G++PD V + ++SAC++ + GL K ++ + S
Sbjct: 525 LESLRLFSEMR-LLGMRPDIVSFMGVVSACANLAFIRQGKEIHGLLVRKLFHTHLFVANS 583
Query: 470 IEHYLCLVDLLGRAGRFDLALKTIH----------------------------------E 495
L+DL R GR DLA K + E
Sbjct: 584 ------LLDLYTRCGRIDLATKVFYCIQNKDVASWNTMILGYGMRGELDTAINLFEAMKE 637
Query: 496 MPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGST-GNYILMANLFTSAGMWKE 554
VE + + +LSAC +E G K + LN T +Y M +L AG+ +E
Sbjct: 638 DGVEYDSVSFVAVLSACSHGGLIEKGRKYFKMMCDLNIEPTHTHYACMVDLLGRAGLMEE 697
Query: 555 AAT-ARGL 561
AA RGL
Sbjct: 698 AADLIRGL 705
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 85/346 (24%), Positives = 162/346 (46%), Gaps = 8/346 (2%)
Query: 159 GLLNNEIPLANSVMSMYAKFGKVNEARSIFDE--IGETSIVSWTTIIGGYVNVGNVNEAF 216
G L + L S++ YA FG + + +F S W T+I ++ V + F
Sbjct: 64 GFLPRSVSLCASLILQYASFGHPSNSLLLFQHSVAYSRSAFLWNTLIRAN-SIAGVFDGF 122
Query: 217 GLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMY 276
G N M R V PD + ++ C+ + +H + K G++ + + N L++ Y
Sbjct: 123 GTYNTMVRAGVKPDECTYPFVLKVCSDFVEVRKGREVHGVAFKLGFDGDVFVGNTLLAFY 182
Query: 277 TKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLL--KTSVRPNEAT 334
CG A +VFD + E+ W ++IG + G+ EA+ F+ ++ K ++P+ T
Sbjct: 183 GNCGLFGDAMKVFDEMPERDKVSWNTVIGLCSLHGFYEEALGFFRVMVAAKPGIQPDLVT 242
Query: 335 LATTLSACAELGSLSKGKEIEEYIVLNGLESNR-QVQTSLIHMFSKCGRINKAKEVFERV 393
+ + L CAE + + Y + GL +V +L+ ++ KCG +K+VF+ +
Sbjct: 243 VVSVLPVCAETEDKVMARIVHCYALKVGLLGGHVKVGNALVDVYGKCGSEKASKKVFDEI 302
Query: 394 PDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDG 453
++++ W+A+I ++ G AL++F M EG++P++V +S+L G+ G
Sbjct: 303 DERNVISWNAIITSFSFRGKYMDALDVFRLMID-EGMRPNSVTISSMLPVLGELGLFKLG 361
Query: 454 LSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVE 499
+ IE + L+D+ ++G +A ++M V
Sbjct: 362 ME-VHGFSLKMAIESDVFISNSLIDMYAKSGSSRIASTIFNKMGVR 406
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 94/214 (43%), Gaps = 38/214 (17%)
Query: 272 LVSMYTKCGDLELARRV-----FDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKR---- 322
L+ + T C L ++V L +SV L S+I YA G+PS ++ LF+
Sbjct: 40 LLQLCTLCDTLSQTKQVHAYSLLHGFLPRSVSLCASLILQYASFGHPSNSLLLFQHSVAY 99
Query: 323 ----------------------------LLKTSVRPNEATLATTLSACAELGSLSKGKEI 354
+++ V+P+E T L C++ + KG+E+
Sbjct: 100 SRSAFLWNTLIRANSIAGVFDGFGTYNTMVRAGVKPDECTYPFVLKVCSDFVEVRKGREV 159
Query: 355 EEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMG 414
G + + V +L+ + CG A +VF+ +P++D W+ +I ++HG
Sbjct: 160 HGVAFKLGFDGDVFVGNTLLAFYGNCGLFGDAMKVFDEMPERDKVSWNTVIGLCSLHGFY 219
Query: 415 DQALNLFYKMQHVE-GLKPDAVVYTSILSACSHS 447
++AL F M + G++PD V S+L C+ +
Sbjct: 220 EEALGFFRVMVAAKPGIQPDLVTVVSVLPVCAET 253
>gi|302802241|ref|XP_002982876.1| hypothetical protein SELMODRAFT_117311 [Selaginella moellendorffii]
gi|300149466|gb|EFJ16121.1| hypothetical protein SELMODRAFT_117311 [Selaginella moellendorffii]
Length = 923
Score = 334 bits (857), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 196/621 (31%), Positives = 320/621 (51%), Gaps = 14/621 (2%)
Query: 12 EETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGL 71
+E L + M GV N T L AC + + R+H+ ++ D VQT L
Sbjct: 222 DEALELFRQMRLGGVTPNKGTCVAALNACCHSRDFSEALRIHAFARELAGDADTVVQTAL 281
Query: 72 IDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLEL 131
++MY K + ++ + ++ R VVSWN++++A++ +D+A +EM ++G
Sbjct: 282 VNMYGKFGKVDDAEEIFER--IQERDVVSWNAMLTANACNGFHDKAFKCFREMLLVGELP 339
Query: 132 SASTFVSVVSGCSFRQGISMHCCVYKL------GLLNNEIPLANSVMSMYAKFGKVNEAR 185
S T+V++++ C + V L G+ + ++ + ++M+MY++ A
Sbjct: 340 SRITYVAILNACFLAAHLKHGDFVKTLAVEGGCGIESVDVVMGTAIMNMYSRCKSPKSAF 399
Query: 186 S----IFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGC 241
S + + + SI+ W T++ YV EAF + M VT D V + + C
Sbjct: 400 SSSLLLEQDRDQPSIMMWNTVLSLYVENEQFEEAFTIFRLMLLGGVTIDTVSLMTVFNAC 459
Query: 242 AQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWT 301
+L +HSLL +S + P+ N LV+MY + G LE AR +FDA+ ++V WT
Sbjct: 460 GSSASLEKGKWIHSLLTESELTRKTPVQNALVTMYARLGSLEDAREIFDAMTTRNVISWT 519
Query: 302 SMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLN 361
+M+G ++QLG EA+ +F+ +L V PNE T L+AC L S+ K ++ +
Sbjct: 520 AMVGVHSQLGLNREALRIFRSILLEGVAPNEVTFTAVLNACGNLASIPAAKLVQACLSET 579
Query: 362 GLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLF 421
G N +V L+ KCG + + F+ + K+ W+ I A HG G + + LF
Sbjct: 580 GFFGNVEVANGLLCTLGKCGSLEEVANFFQVMAVKNQVSWNTAIAANAQHGNGVRGVELF 639
Query: 422 YKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLG 481
MQ +EG+ +V +LS+CSH+G+V G S+F +M ++G EHY C++DLL
Sbjct: 640 QTMQ-LEGIDTGSVTLIGVLSSCSHAGLVAQGYSYFLNMHVDYGFPAEAEHYSCVIDLLS 698
Query: 482 RAGRFDLALKTIHEMPVEVQAQV-WAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYI 540
RAG + A + + +P Q+ W LL C H ++E G A + +L LNPGSTG Y+
Sbjct: 699 RAGWLEHAEEFVKRLPFGDQSVFPWITLLCGCKLHGDLERGGRATQRILGLNPGSTGPYL 758
Query: 541 LMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRK 600
+M NL+ AG W EAA R M + KEPG S +E+ G + F GD SH S +I +
Sbjct: 759 VMHNLYAGAGKWPEAAAVRKSMVELGPKKEPGLSWIEVKGRIHEFRVGDTSHPRSSEIHR 818
Query: 601 TLKELHIKLLEAGYIAEADIV 621
L+ L+ ++ AG++ + V
Sbjct: 819 ELERLNEEMKRAGFVCDIKAV 839
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 101/342 (29%), Positives = 180/342 (52%), Gaps = 13/342 (3%)
Query: 133 ASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIF 188
ASTF +++ C+ QG +H + + G+ + L +++MY K G EAR++F
Sbjct: 40 ASTFAALIHKCARLHDLAQGRRIHGLILRNGIEVGDF-LGARLLAMYCKCGSPEEARAVF 98
Query: 189 DEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLF 248
I + S+V+WT++IG G+ EAF L +M+ V P+ V ++ ++ C G+ +
Sbjct: 99 QGIQDKSVVAWTSLIGVNARSGHPKEAFHLFREMQLQGVMPNDVTYVAVLGAC---GHPW 155
Query: 249 LALSMHSLLLKSGYNNEDPL-DNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGY 307
++ + + G D + +++ Y KCGDL+ A VFD +L + +W +MI
Sbjct: 156 EVDTIRARVEACGSLELDVIVATAVMNAYGKCGDLDSAWGVFDGILVRDAAVWNAMISLL 215
Query: 308 AQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNR 367
EA+ LF+++ V PN+ T L+AC S+ I + +++
Sbjct: 216 VAHEQGDEALELFRQMRLGGVTPNKGTCVAALNACCHSRDFSEALRIHAFARELAGDADT 275
Query: 368 QVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHV 427
VQT+L++M+ K G+++ A+E+FER+ ++D+ W+AM+ A +G D+A F +M V
Sbjct: 276 VVQTALVNMYGKFGKVDDAEEIFERIQERDVVSWNAMLTANACNGFHDKAFKCFREMLLV 335
Query: 428 EGLKPDAVVYTSILSACSHSGMVDDGLSFFKSM--QSNFGIE 467
G P + Y +IL+AC + + G F K++ + GIE
Sbjct: 336 -GELPSRITYVAILNACFLAAHLKHG-DFVKTLAVEGGCGIE 375
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 109/433 (25%), Positives = 209/433 (48%), Gaps = 11/433 (2%)
Query: 29 NSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVL 88
++ TF ++ CA ++ + G+R+H +L+ G + F+ L+ MY KC +R V
Sbjct: 39 DASTFAALIHKCARLHDLAQGRRIHGLILRNGIEVGDFLGARLLAMYCKCGSPEEARAVF 98
Query: 89 DEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCSFRQG 148
++ +SVV+W S+I ++R+ EA + +EM + G+ + T+V+V+ C
Sbjct: 99 Q--GIQDKSVVAWTSLIGVNARSGHPKEAFHLFREMQLQGVMPNDVTYVAVLGACGHPWE 156
Query: 149 I-SMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYV 207
+ ++ V G L ++ +A +VM+ Y K G ++ A +FD I W +I V
Sbjct: 157 VDTIRARVEACGSLELDVIVATAVMNAYGKCGDLDSAWGVFDGILVRDAAVWNAMISLLV 216
Query: 208 NVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDP 267
+EA L QMR VTP+ + + C + AL +H+ + + +
Sbjct: 217 AHEQGDEALELFRQMRLGGVTPNKGTCVAALNACCHSRDFSEALRIHAFARELAGDADTV 276
Query: 268 LDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTS 327
+ LV+MY K G ++ A +F+ + E+ V W +M+ A G+ +A F+ +L
Sbjct: 277 VQTALVNMYGKFGKVDDAEEIFERIQERDVVSWNAMLTANACNGFHDKAFKCFREMLLVG 336
Query: 328 VRPNEATLATTLSACAELGSLSKGKEIEEYIVLN--GLESNRQVQ-TSLIHMFSKCGRIN 384
P+ T L+AC L G ++ V G+ES V T++++M+S+C
Sbjct: 337 ELPSRITYVAILNACFLAAHLKHGDFVKTLAVEGGCGIESVDVVMGTAIMNMYSRCKSPK 396
Query: 385 KAKE---VFERVPDK-DLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSI 440
A + E+ D+ + +W+ +++ Y + ++A +F ++ + G+ D V ++
Sbjct: 397 SAFSSSLLLEQDRDQPSIMMWNTVLSLYVENEQFEEAFTIF-RLMLLGGVTIDTVSLMTV 455
Query: 441 LSACSHSGMVDDG 453
+AC S ++ G
Sbjct: 456 FNACGSSASLEKG 468
Score = 142 bits (357), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 95/292 (32%), Positives = 149/292 (51%), Gaps = 7/292 (2%)
Query: 228 TPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARR 287
+ D F LI CA++ +L +H L+L++G D L L++MY KCG E AR
Sbjct: 37 SADASTFAALIHKCARLHDLAQGRRIHGLILRNGIEVGDFLGARLLAMYCKCGSPEEARA 96
Query: 288 VFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGS 347
VF + +KSV WTS+IG A+ G+P EA +LF+ + V PN+ T L AC
Sbjct: 97 VFQGIQDKSVVAWTSLIGVNARSGHPKEAFHLFREMQLQGVMPNDVTYVAVLGACGHPWE 156
Query: 348 LSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMING 407
+ + E LE + V T++++ + KCG ++ A VF+ + +D AVW+AMI+
Sbjct: 157 VDTIRARVE--ACGSLELDVIVATAVMNAYGKCGDLDSAWGVFDGILVRDAAVWNAMISL 214
Query: 408 YAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIE 467
H GD+AL LF +M+ + G+ P+ + L+AC HS + L + G
Sbjct: 215 LVAHEQGDEALELFRQMR-LGGVTPNKGTCVAALNACCHSRDFSEALRIHAFARELAGDA 273
Query: 468 PSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLS--ACMKHHN 517
++ LV++ G+ G+ D A + I E E W +L+ AC H+
Sbjct: 274 DTVVQ-TALVNMYGKFGKVDDA-EEIFERIQERDVVSWNAMLTANACNGFHD 323
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/309 (24%), Positives = 141/309 (45%), Gaps = 16/309 (5%)
Query: 8 NGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFV 67
N FEE + + ML GV ++ + V AC + S+ GK +HS + + + V
Sbjct: 427 NEQFEEAFTIFRLMLLGGVTIDTVSLMTVFNACGSSASLEKGKWIHSLLTESELTRKTPV 486
Query: 68 QTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVL 127
Q L+ MY++ +R++ D M R+V+SW +++ HS+ LN EA+ + + + +
Sbjct: 487 QNALVTMYARLGSLEDAREIFDAMTT--RNVISWTAMVGVHSQLGLNREALRIFRSILLE 544
Query: 128 GLELSASTFVSVVSGCSFRQGIS----MHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNE 183
G+ + TF +V++ C I + C+ + G N + +AN ++ K G + E
Sbjct: 545 GVAPNEVTFTAVLNACGNLASIPAAKLVQACLSETGFFGN-VEVANGLLCTLGKCGSLEE 603
Query: 184 ARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQ 243
+ F + + VSW T I GN L M+ + V + ++ C+
Sbjct: 604 VANFFQVMAVKNQVSWNTAIAANAQHGNGVRGVELFQTMQLEGIDTGSVTLIGVLSSCSH 663
Query: 244 VGNLFLA----LSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVL--EKSV 297
G + L+MH + G+ E + ++ + ++ G LE A + ++SV
Sbjct: 664 AGLVAQGYSYFLNMH---VDYGFPAEAEHYSCVIDLLSRAGWLEHAEEFVKRLPFGDQSV 720
Query: 298 FLWTSMIGG 306
F W +++ G
Sbjct: 721 FPWITLLCG 729
>gi|115471645|ref|NP_001059421.1| Os07g0299800 [Oryza sativa Japonica Group]
gi|34394298|dbj|BAC84780.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113610957|dbj|BAF21335.1| Os07g0299800 [Oryza sativa Japonica Group]
Length = 673
Score = 334 bits (857), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 177/471 (37%), Positives = 273/471 (57%), Gaps = 8/471 (1%)
Query: 151 MHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVG 210
+H + GL ++ A++++ MY + +AR FDEI + + V T + GYV
Sbjct: 115 LHLLALRSGLFPSDPYSASALLHMYHHCSRPMDARRAFDEIPDPNPVIVTAMASGYVRNN 174
Query: 211 NVNEAFGLCNQM--RRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPL 268
V + L M + D L A+V + + S+H+L+ K G+ +
Sbjct: 175 LVYHSLELFRAMIASDSASVVDEAAALVAFSASARVPDRGVTASLHALIAKIGFERNAGV 234
Query: 269 DNLLVSMYTKCG--DLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKT 326
N ++ Y K G DLE+AR+VFD +E+ V W SMI YAQ G +EA+ L+ ++L
Sbjct: 235 VNTMLDSYAKGGSRDLEVARKVFD-TMERDVVSWNSMIALYAQNGMSAEAIGLYSKMLNV 293
Query: 327 S--VRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRIN 384
++ N L+ L ACA G++ GK I +V GLE N V TS++ M+SKCGR+
Sbjct: 294 GGGIKCNAVALSAVLLACAHAGAIQTGKRIHNQVVRMGLEENVYVGTSIVDMYSKCGRVE 353
Query: 385 KAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSAC 444
A F ++ +K++ WSAMI GY +HG G +AL +F +M+ GL+P+ + + S+L+AC
Sbjct: 354 MASRAFRKIKEKNILSWSAMITGYGMHGRGQEALEIFTEMKR-SGLRPNYITFISVLAAC 412
Query: 445 SHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQV 504
SH+G++D+G ++ +M+ FGIE +EHY C+VDLLGRAG D A I EM V+ A +
Sbjct: 413 SHAGLLDEGRYWYNAMKQEFGIEAGVEHYGCMVDLLGRAGCLDEAYSLIKEMKVKPDAAI 472
Query: 505 WAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDD 564
W LLSAC H NVEL E + K L L+ ++G Y+L++N++ A MWK+ R L+
Sbjct: 473 WGALLSACRIHKNVELAEMSVKRLFELDASNSGYYVLLSNIYAEARMWKDVERIRLLVKT 532
Query: 565 RRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKELHIKLLEAGYI 615
RR+ K PG+S E+ G + +F GD+SH ++I L++L ++ EAGY+
Sbjct: 533 RRIEKPPGYSSFELKGKIYLFYVGDKSHPQHIEIYSYLEKLLERMQEAGYV 583
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 103/381 (27%), Positives = 189/381 (49%), Gaps = 31/381 (8%)
Query: 51 RVHSHVLKVG-FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMP-------VRLRSVVSWN 102
++H L+ G F D + + L+ MY CS + +R+ DE+P + S N
Sbjct: 114 QLHLLALRSGLFPSDPYSASALLHMYHHCSRPMDARRAFDEIPDPNPVIVTAMASGYVRN 173
Query: 103 SIISAHS----RACLNDEAILVLKEMWVLGLELSASTFVSVVSGCSFRQGI--SMHCCVY 156
+++ HS RA + ++ V+ E L + SAS V +G+ S+H +
Sbjct: 174 NLVY-HSLELFRAMIASDSASVVDEAAAL-VAFSASARVP-------DRGVTASLHALIA 224
Query: 157 KLGLLNNEIPLANSVMSMYAKFGK--VNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNE 214
K+G N + N+++ YAK G + AR +FD + E +VSW ++I Y G E
Sbjct: 225 KIGFERNA-GVVNTMLDSYAKGGSRDLEVARKVFDTM-ERDVVSWNSMIALYAQNGMSAE 282
Query: 215 AFGLCNQMRRM--SVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLL 272
A GL ++M + + + V ++L CA G + +H+ +++ G + +
Sbjct: 283 AIGLYSKMLNVGGGIKCNAVALSAVLLACAHAGAIQTGKRIHNQVVRMGLEENVYVGTSI 342
Query: 273 VSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNE 332
V MY+KCG +E+A R F + EK++ W++MI GY G EA+ +F + ++ +RPN
Sbjct: 343 VDMYSKCGRVEMASRAFRKIKEKNILSWSAMITGYGMHGRGQEALEIFTEMKRSGLRPNY 402
Query: 333 ATLATTLSACAELGSLSKGKEIEEYIVLN-GLESNRQVQTSLIHMFSKCGRINKAKEVFE 391
T + L+AC+ G L +G+ + G+E+ + ++ + + G +++A + +
Sbjct: 403 ITFISVLAACSHAGLLDEGRYWYNAMKQEFGIEAGVEHYGCMVDLLGRAGCLDEAYSLIK 462
Query: 392 RVPDK-DLAVWSAMINGYAIH 411
+ K D A+W A+++ IH
Sbjct: 463 EMKVKPDAAIWGALLSACRIH 483
Score = 92.0 bits (227), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 117/252 (46%), Gaps = 34/252 (13%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTG--VHGNSFTFPLVLKACANINSIWDGKRVHSHVLK 58
MI NG E + YS ML G + N+ VL ACA+ +I GKR+H+ V++
Sbjct: 270 MIALYAQNGMSAEAIGLYSKMLNVGGGIKCNAVALSAVLLACAHAGAIQTGKRIHNQVVR 329
Query: 59 VGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAI 118
+G +++ +V T ++DMYSKC + + + ++ ++++SW+++I+ + EA+
Sbjct: 330 MGLEENVYVGTSIVDMYSKCGRVEMASRAFRK--IKEKNILSWSAMITGYGMHGRGQEAL 387
Query: 119 LVLKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKF 178
+ EM GL + TF+SV++ CS GLL+ N++ +
Sbjct: 388 EIFTEMKRSGLRPNYITFISVLAACS------------HAGLLDEGRYWYNAMKQEFGIE 435
Query: 179 GKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLI 238
V + D +G G ++EA+ L +M+ V PD ++ L+
Sbjct: 436 AGVEHYGCMVDLLGRA---------------GCLDEAYSLIKEMK---VKPDAAIWGALL 477
Query: 239 LGCAQVGNLFLA 250
C N+ LA
Sbjct: 478 SACRIHKNVELA 489
>gi|225423995|ref|XP_002279343.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 623
Score = 334 bits (857), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 190/592 (32%), Positives = 323/592 (54%), Gaps = 24/592 (4%)
Query: 33 FPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMP 92
F +L++C + ++ + ++ GFQ + ++ L+ + + +R++ D++P
Sbjct: 41 FISLLQSCKTSKQV---HQIQAQIIANGFQYNEYITPKLVTICATLKRMTYARQLFDQIP 97
Query: 93 VRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGC----SFRQG 148
++ WNS+ ++++ E + + +M + + + TF V+ C + +G
Sbjct: 98 DP--NIALWNSMFRGYAQSESYREVVFLFFQMKGMDIRPNCFTFPVVLKSCGKINALIEG 155
Query: 149 ISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVN 208
+HC + K G N + +++ MY+ G V +A IF E+ E ++V+WT++I GY+
Sbjct: 156 EQVHCFLIKCGFRGNPF-VGTTLIDMYSAGGTVGDAYKIFCEMFERNVVAWTSMINGYIL 214
Query: 209 VGNVNEAFGLCNQMRRMSVTP--DLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNED 266
+ L + R + P D+V++ ++ G + G++ A L N +
Sbjct: 215 SAD------LVSARRLFDLAPERDVVLWNIMVSGYIEGGDMVEARK----LFHEMPNRDV 264
Query: 267 PLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKT 326
N ++ Y G++E +F+ + E+++F W ++IGGYA G E + FKR+L
Sbjct: 265 MFWNTVLKGYATNGNVEALEGLFEEMPERNIFSWNALIGGYAHNGLFFEVLGSFKRMLSE 324
Query: 327 S-VRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINK 385
S V PN+ATL T LSACA LG+L GK + Y +GL+ N V +L+ M++KCG I
Sbjct: 325 SDVPPNDATLVTVLSACARLGALDLGKWVHVYAESSGLKGNVYVGNALMDMYAKCGIIEN 384
Query: 386 AKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACS 445
A VF + KDL W+ +I G A+H G ALNLF++M++ G KPD + + IL AC+
Sbjct: 385 AISVFRGMDTKDLISWNTLIGGLAMHSRGADALNLFFQMKNA-GQKPDGITFIGILCACT 443
Query: 446 HSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVW 505
H G+V+DG ++F+SM ++ I P IEHY C+VD+L RAGR + A+ + +MPVE +W
Sbjct: 444 HMGLVEDGFAYFQSMADDYLIMPQIEHYGCMVDMLARAGRLEQAMAFVRKMPVEADGVIW 503
Query: 506 APLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDR 565
A LL AC + NVEL E A + L+ L P + NY++++N++ AG W++ A + M D
Sbjct: 504 AGLLGACRIYKNVELAELALQRLIELEPKNPANYVMLSNIYGDAGRWEDVARLKVAMRDT 563
Query: 566 RLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKELHIKLLEAGYIAE 617
K PG S +E++ +V F + D H +I L+ L L GY+ +
Sbjct: 564 GFKKLPGCSLIEVNDAVVEFYSLDERHPQIEEIYGVLRGLVKVLRSFGYVPD 615
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 119/420 (28%), Positives = 207/420 (49%), Gaps = 22/420 (5%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
M R + S+ E + + M + N FTFP+VLK+C IN++ +G++VH ++K G
Sbjct: 107 MFRGYAQSESYREVVFLFFQMKGMDIRPNCFTFPVVLKSCGKINALIEGEQVHCFLIKCG 166
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F+ + FV T LIDMYS + K+ EM R+VV+W S+I+ + + ++
Sbjct: 167 FRGNPFVGTTLIDMYSAGGTVGDAYKIFCEM--FERNVVAWTSMINGY----ILSADLVS 220
Query: 121 LKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKL--GLLNNEIPLANSVMSMYAKF 178
+ ++ L E + +VSG + +G M KL + N ++ N+V+ YA
Sbjct: 221 ARRLFDLAPERDVVLWNIMVSG--YIEGGDM-VEARKLFHEMPNRDVMFWNTVLKGYATN 277
Query: 179 GKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMS-VTPDLVVFLNL 237
G V +F+E+ E +I SW +IGGY + G E G +M S V P+ + +
Sbjct: 278 GNVEALEGLFEEMPERNIFSWNALIGGYAHNGLFFEVLGSFKRMLSESDVPPNDATLVTV 337
Query: 238 ILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSV 297
+ CA++G L L +H SG + N L+ MY KCG +E A VF + K +
Sbjct: 338 LSACARLGALDLGKWVHVYAESSGLKGNVYVGNALMDMYAKCGIIENAISVFRGMDTKDL 397
Query: 298 FLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKG-----K 352
W ++IGG A ++A+NLF ++ +P+ T L AC +G + G
Sbjct: 398 ISWNTLIGGLAMHSRGADALNLFFQMKNAGQKPDGITFIGILCACTHMGLVEDGFAYFQS 457
Query: 353 EIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVP-DKDLAVWSAMINGYAIH 411
++Y+++ +E ++ M ++ GR+ +A ++P + D +W+ ++ I+
Sbjct: 458 MADDYLIMPQIEH----YGCMVDMLARAGRLEQAMAFVRKMPVEADGVIWAGLLGACRIY 513
>gi|449530632|ref|XP_004172298.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Cucumis sativus]
Length = 688
Score = 334 bits (856), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 193/581 (33%), Positives = 321/581 (55%), Gaps = 18/581 (3%)
Query: 50 KRVHSHVLKVGFQQDAFVQTGLIDMYSKCS-DFVS---SRKVLDEMPVRLRSVVSWNSII 105
K +H+ +L++ QD + L+++ C+ DF S S+ V + V+ ++ WN++I
Sbjct: 33 KHIHARLLRLHLDQDNY----LLNLILCCALDFGSTNYSKLVFSQ--VKEPNIFLWNTMI 86
Query: 106 SAH-SRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGL 160
S+ C D+AI + M G + T V+ C+ R G+ +H + K G
Sbjct: 87 RGLVSKDCF-DDAIHLYGSMRGGGFLPNNFTIPFVLKACARKLDVRLGLKIHSLLVKAGY 145
Query: 161 LNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCN 220
++++ + S++S+Y K ++A +FD+I + ++VSWT II GY++ G+ EA G
Sbjct: 146 -DHDVFVKTSLLSLYVKCDNFDDALKVFDDIPDKNVVSWTAIITGYISSGHFREAIGAFK 204
Query: 221 QMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCG 280
++ M + PD + ++ CA++G+ + + SG + L+ MY KCG
Sbjct: 205 KLLEMGLKPDSFSLVKVLAACARLGDCTSGEWIDRYISDSGMGRNVFVATSLLDMYVKCG 264
Query: 281 DLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLS 340
+LE A +F A+ EK + W++MI GYA G P +A++LF ++ +++P+ T+ LS
Sbjct: 265 NLERANLIFSAMPEKDIVSWSTMIQGYAFNGLPQQALDLFFQMQSENLKPDCYTMVGVLS 324
Query: 341 ACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAV 400
ACA LG+L G + N SN + T+LI M+SKCG + +A E+F + KD V
Sbjct: 325 ACATLGALDLGIWASSLMDRNEFLSNPVLGTALIDMYSKCGSVTQAWEIFTAMKKKDRVV 384
Query: 401 WSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSM 460
W+AM+ G +++G +LF ++ G++PD + +L C+H G V++G FF +M
Sbjct: 385 WNAMMVGLSMNGHAKAVFSLFSLVEK-HGIRPDENTFIGLLCGCTHGGFVNEGRQFFNNM 443
Query: 461 QSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVEL 520
+ F + PSIEHY C+VDLLGRAG + A + I+ MP++ A VW LL C H + L
Sbjct: 444 KRVFSLTPSIEHYGCMVDLLGRAGLLNEAHQLINNMPMKPNAVVWGALLGGCKLHKDTHL 503
Query: 521 GEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDG 580
E K L+ L P ++GNY+ ++N+++ W+EA R M ++++ K S +EIDG
Sbjct: 504 AEQVLKKLIELEPWNSGNYVQLSNIYSGNHRWEEAEKIRSTMKEQQIQKIRACSWIEIDG 563
Query: 581 SVQVFVAGDRSHHLSVDIRKTLKELHIKLLEAGYIAEADIV 621
V F+ GD+SH LS I L EL +L G++ + V
Sbjct: 564 IVHEFLVGDKSHWLSEKIYAKLDELGRELKAVGHVPTTEFV 604
Score = 208 bits (530), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 122/366 (33%), Positives = 202/366 (55%), Gaps = 6/366 (1%)
Query: 145 FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIG 204
F Q +H + +L L + + L N ++ FG N ++ +F ++ E +I W T+I
Sbjct: 29 FNQLKHIHARLLRLHL-DQDNYLLNLILCCALDFGSTNYSKLVFSQVKEPNIFLWNTMIR 87
Query: 205 GYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNN 264
G V+ ++A L MR P+ ++ CA+ ++ L L +HSLL+K+GY++
Sbjct: 88 GLVSKDCFDDAIHLYGSMRGGGFLPNNFTIPFVLKACARKLDVRLGLKIHSLLVKAGYDH 147
Query: 265 EDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLL 324
+ + L+S+Y KC + + A +VFD + +K+V WT++I GY G+ EA+ FK+LL
Sbjct: 148 DVFVKTSLLSLYVKCDNFDDALKVFDDIPDKNVVSWTAIITGYISSGHFREAIGAFKKLL 207
Query: 325 KTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRIN 384
+ ++P+ +L L+ACA LG + G+ I+ YI +G+ N V TSL+ M+ KCG +
Sbjct: 208 EMGLKPDSFSLVKVLAACARLGDCTSGEWIDRYISDSGMGRNVFVATSLLDMYVKCGNLE 267
Query: 385 KAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSAC 444
+A +F +P+KD+ WS MI GYA +G+ QAL+LF++MQ E LKPD +LSAC
Sbjct: 268 RANLIFSAMPEKDIVSWSTMIQGYAFNGLPQQALDLFFQMQS-ENLKPDCYTMVGVLSAC 326
Query: 445 SHSGMVDDGLSFFKSMQSN-FGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQ 503
+ G +D G+ M N F P + L+D+ + G A + M + +
Sbjct: 327 ATLGALDLGIWASSLMDRNEFLSNPVLG--TALIDMYSKCGSVTQAWEIFTAMKKKDRV- 383
Query: 504 VWAPLL 509
VW ++
Sbjct: 384 VWNAMM 389
Score = 202 bits (513), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 129/439 (29%), Positives = 224/439 (51%), Gaps = 19/439 (4%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MIR + F++ + Y SM G N+FT P VLKACA + G ++HS ++K G
Sbjct: 85 MIRGLVSKDCFDDAIHLYGSMRGGGFLPNNFTIPFVLKACARKLDVRLGLKIHSLLVKAG 144
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+ D FV+T L+ +Y KC +F + KV D++P ++VVSW +II+ + + EAI
Sbjct: 145 YDHDVFVKTSLLSLYVKCDNFDDALKVFDDIPD--KNVVSWTAIITGYISSGHFREAIGA 202
Query: 121 LKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
K++ +GL+ + + V V++ C+ G + + G+ N + +A S++ MY
Sbjct: 203 FKKLLEMGLKPDSFSLVKVLAACARLGDCTSGEWIDRYISDSGMGRN-VFVATSLLDMYV 261
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K G + A IF + E IVSW+T+I GY G +A L QM+ ++ PD +
Sbjct: 262 KCGNLERANLIFSAMPEKDIVSWSTMIQGYAFNGLPQQALDLFFQMQSENLKPDCYTMVG 321
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
++ CA +G L L + SL+ ++ + + L L+ MY+KCG + A +F A+ +K
Sbjct: 322 VLSACATLGALDLGIWASSLMDRNEFLSNPVLGTALIDMYSKCGSVTQAWEIFTAMKKKD 381
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEE 356
+W +M+ G + G+ +LF + K +RP+E T L C G +++G++
Sbjct: 382 RVVWNAMMVGLSMNGHAKAVFSLFSLVEKHGIRPDENTFIGLLCGCTHGGFVNEGRQF-- 439
Query: 357 YIVLNGLESNRQVQTSLIH------MFSKCGRINKAKEVFERVPDKDLA-VWSAMINGYA 409
N ++ + S+ H + + G +N+A ++ +P K A VW A++ G
Sbjct: 440 ---FNNMKRVFSLTPSIEHYGCMVDLLGRAGLLNEAHQLINNMPMKPNAVVWGALLGGCK 496
Query: 410 IHGMGDQALNLFYKMQHVE 428
+H A + K+ +E
Sbjct: 497 LHKDTHLAEQVLKKLIELE 515
>gi|326526571|dbj|BAJ97302.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 851
Score = 334 bits (856), Expect = 9e-89, Method: Compositional matrix adjust.
Identities = 197/598 (32%), Positives = 319/598 (53%), Gaps = 18/598 (3%)
Query: 32 TFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEM 91
T VL CA + G+ VH K G+ A V L+DMY+KC + + + E
Sbjct: 172 TLVTVLPMCAALGWSETGRAVHGLAAKSGWDAPARVGNALVDMYAKCGELADAERAFPEA 231
Query: 92 PVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVL---GLELSASTFVSVVSGCSFRQG 148
P SVVSWN ++ A++R A +L++M + + T +SV+ CS
Sbjct: 232 P----SVVSWNVMLGAYTRNREAGAAFGLLRDMQIKEHGSVPADEITVLSVLPACSGPTE 287
Query: 149 IS----MHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIG 204
+S +H + GL + N++++ Y + G++ A +F +I ++ SW T+I
Sbjct: 288 LSRLRELHAFTVRRGLDAASDKVPNALVAAYGRCGRLLHADRVFTDIRRKTVSSWNTLIS 347
Query: 205 GYVNVGNVNEAFGLCNQMRRM-SVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYN 263
+ N A L QM + PD +L++ CA +L + H +L++G
Sbjct: 348 AHAQQ-NTAAAIELFIQMTNACGLKPDGFSIGSLLMACADPKHLLHVKATHGFILRNGLE 406
Query: 264 NEDPLDNLLVSMYTKCGDLE-LARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKR 322
+ + L+S Y +C E LAR +FDA+ EK LW +MI GY+Q G P E++ LF+
Sbjct: 407 RDTVIRASLLSAYIRCSRTEYLARVLFDAMEEKGEVLWIAMISGYSQNGLPGESLQLFRE 466
Query: 323 LLKTSVRPNEATLATT-LSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCG 381
+ + AT+ L AC+EL S+ GKE+ + + L + + +SLI M+SKCG
Sbjct: 467 MQSVEGHCSSVISATSALMACSELSSVRLGKEMHCFALKADLCDDPFLSSSLIDMYSKCG 526
Query: 382 RINKAKEVFERVPDKDLAV-WSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSI 440
+ A+ F+R+ +D V W+AMI GYA++G+G +A+ L+ KM+ EG++PD Y +
Sbjct: 527 FVEDARTFFDRLKARDAKVSWTAMITGYAVNGLGREAVELYGKMRR-EGMEPDEFTYLGL 585
Query: 441 LSACSHSGMVDDGLSFFKSMQSNF-GIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVE 499
L AC H+GM+++GL FF M+++ IE +EHY C++ +L RAGRF A+ + EMP E
Sbjct: 586 LMACGHAGMLEEGLRFFDEMRNHHHKIEVKLEHYSCVIGMLSRAGRFADAVALMAEMPQE 645
Query: 500 VQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATAR 559
A++ + +LSAC H ELG A+ LL L P +Y+L +N++ + W + R
Sbjct: 646 PDAKILSSVLSACHIHGEAELGSDVAERLLELEPDKAEHYVLASNMYAGSRRWDDMRKVR 705
Query: 560 GLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKELHIKLLEAGYIAE 617
++ D + KEPG S +++ G V FVAG+ H +R + L ++ E GY+ +
Sbjct: 706 KMLRDAGIAKEPGCSWIDVAGKVYSFVAGENPHPEMEQVRGMWRSLEERIREIGYVPD 763
Score = 132 bits (331), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 102/360 (28%), Positives = 171/360 (47%), Gaps = 21/360 (5%)
Query: 101 WNSIISAHSRACLNDEAILVLKEMWVL--GLELSASTFVSVVSGCSFRQ------GISMH 152
WN++++ HSRA + +A+ +L + G+ T C F + G +H
Sbjct: 32 WNALLADHSRAGRHADALALLPPLLAASEGIAPDRFTLPPAARSCGFLRVGAAAAGRQVH 91
Query: 153 CCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETS--IVSWTTIIGGYVNVG 210
KLGL + + NS++SMY + G+V +A +F I + + IVSW ++
Sbjct: 92 ALAAKLGLPGDPF-VGNSLVSMYGRCGRVEDAEKVFGGIPDAARNIVSWNALMAALSGDP 150
Query: 211 NVN-EAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLD 269
E F C + + D + ++ CA +G ++H L KSG++ +
Sbjct: 151 RRGLELFRDC--LVAVGGMVDEATLVTVLPMCAALGWSETGRAVHGLAAKSGWDAPARVG 208
Query: 270 NLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLL---KT 326
N LV MY KCG+L A R F SV W M+G Y + A L + +
Sbjct: 209 NALVDMYAKCGELADAERAFPEA--PSVVSWNVMLGAYTRNREAGAAFGLLRDMQIKEHG 266
Query: 327 SVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLE-SNRQVQTSLIHMFSKCGRINK 385
SV +E T+ + L AC+ LS+ +E+ + V GL+ ++ +V +L+ + +CGR+
Sbjct: 267 SVPADEITVLSVLPACSGPTELSRLRELHAFTVRRGLDAASDKVPNALVAAYGRCGRLLH 326
Query: 386 AKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACS 445
A VF + K ++ W+ +I+ +A A+ LF +M + GLKPD S+L AC+
Sbjct: 327 ADRVFTDIRRKTVSSWNTLISAHAQQNTA-AAIELFIQMTNACGLKPDGFSIGSLLMACA 385
>gi|413944176|gb|AFW76825.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 823
Score = 334 bits (856), Expect = 9e-89, Method: Compositional matrix adjust.
Identities = 194/617 (31%), Positives = 321/617 (52%), Gaps = 8/617 (1%)
Query: 9 GSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQ 68
G FEE L + + + G N F +LK +++ +H+ K+G ++AFV
Sbjct: 127 GEFEEALELFRRLQREGHEVNHFVLTTILKVLVTMDAPGLACGIHACACKLGHDRNAFVG 186
Query: 69 TGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLG 128
T LID YS C +R V D + + V+W +++S +S + + A+ +M + G
Sbjct: 187 TALIDAYSLCGAVCHARCVFD--GIVGKDAVTWTAMVSCYSENDIPEYALNTFSKMRMTG 244
Query: 129 LELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEA 184
+ + S + S G +H C K L + E + +++ MYAK G + +A
Sbjct: 245 FKPNPFVLTSALKAAVCLSSALLGKGIHGCSVKT-LYDTEPHVGGALLDMYAKCGDIEDA 303
Query: 185 RSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQV 244
+IF+ I ++ W+ +I Y +AF + +M R V P+ ++ CA +
Sbjct: 304 HAIFEMIPHDDVILWSFLISRYAQSCQNEQAFEMFLRMMRSFVVPNEFSLSGVLQACANI 363
Query: 245 GNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMI 304
L L +H+L +K GY +E + N L+ MY KC ++E + +F ++ + + W ++I
Sbjct: 364 AFLELGEQIHNLAIKLGYESELFVGNALMDMYAKCRNMENSLEIFSSLQDANEVSWNTII 423
Query: 305 GGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLE 364
GY Q G+ +A+++F + + + T ++ L ACA S+ +I I +
Sbjct: 424 VGYCQSGFAEDALSVFHEMRAAHMLSTQVTFSSVLRACANTSSIKHAVQIHSLIEKSTFN 483
Query: 365 SNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKM 424
++ V SLI ++KCG I A +VFE + + D+ W+++I+ YA+HG AL LF +M
Sbjct: 484 NDTIVCNSLIDTYAKCGFIRDALKVFESIVECDVVSWNSIISAYALHGRATNALELFDRM 543
Query: 425 QHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAG 484
+ +K + V + S+LS C +G+V+ GL F SM + I+PS+EHY C+V LLGRAG
Sbjct: 544 NKSD-IKANDVTFVSLLSVCGSTGLVNQGLWLFNSMMMDHRIKPSMEHYTCIVRLLGRAG 602
Query: 485 RFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMAN 544
R ALK I ++P VW LLS+C+ H NV LG YAA+ +L + P Y+L++N
Sbjct: 603 RLTDALKFIGDIPSTPSPMVWRALLSSCVVHKNVALGRYAAEKVLDIEPHDETTYVLLSN 662
Query: 545 LFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKE 604
++ +AG+ E A R M + + KE G S VEI G V F G H I L+
Sbjct: 663 MYAAAGILDEVALWRKSMRNVGVKKEAGLSWVEIKGEVHAFSVGSADHPDMRIINAMLEW 722
Query: 605 LHIKLLEAGYIAEADIV 621
L++K GY+ + ++V
Sbjct: 723 LNLKASREGYVPDINVV 739
Score = 194 bits (494), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 136/495 (27%), Positives = 252/495 (50%), Gaps = 16/495 (3%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
M+ + N E L+T+S M TG N F LKA ++S GK +H +K
Sbjct: 220 MVSCYSENDIPEYALNTFSKMRMTGFKPNPFVLTSALKAAVCLSSALLGKGIHGCSVKTL 279
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+ + V L+DMY+KC D + + + +P V+ W+ +IS ++++C N++A +
Sbjct: 280 YDTEPHVGGALLDMYAKCGDIEDAHAIFEMIP--HDDVILWSFLISRYAQSCQNEQAFEM 337
Query: 121 LKEM---WVLGLELSASTFVSVVSGCSFRQ-GISMHCCVYKLGLLNNEIPLANSVMSMYA 176
M +V+ E S S + + +F + G +H KLG +E+ + N++M MYA
Sbjct: 338 FLRMMRSFVVPNEFSLSGVLQACANIAFLELGEQIHNLAIKLG-YESELFVGNALMDMYA 396
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K + + IF + + + VSW TII GY G +A + ++MR + V F +
Sbjct: 397 KCRNMENSLEIFSSLQDANEVSWNTIIVGYCQSGFAEDALSVFHEMRAAHMLSTQVTFSS 456
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
++ CA ++ A+ +HSL+ KS +NN+ + N L+ Y KCG + A +VF++++E
Sbjct: 457 VLRACANTSSIKHAVQIHSLIEKSTFNNDTIVCNSLIDTYAKCGFIRDALKVFESIVECD 516
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEE 356
V W S+I YA G + A+ LF R+ K+ ++ N+ T + LS C G +++G +
Sbjct: 517 VVSWNSIISAYALHGRATNALELFDRMNKSDIKANDVTFVSLLSVCGSTGLVNQGLWLFN 576
Query: 357 YIVLNG-LESNRQVQTSLIHMFSKCGRINKAKEVFERVPD-KDLAVWSAMINGYAIHGMG 414
++++ ++ + + T ++ + + GR+ A + +P VW A+++ +H
Sbjct: 577 SMMMDHRIKPSMEHYTCIVRLLGRAGRLTDALKFIGDIPSTPSPMVWRALLSSCVVH--K 634
Query: 415 DQALNLFYKMQHVEGLKP-DAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHY 473
+ AL Y + V ++P D Y + + + +G++D+ + KSM+ N G++ E
Sbjct: 635 NVALGR-YAAEKVLDIEPHDETTYVLLSNMYAAAGILDEVALWRKSMR-NVGVKK--EAG 690
Query: 474 LCLVDLLGRAGRFDL 488
L V++ G F +
Sbjct: 691 LSWVEIKGEVHAFSV 705
Score = 182 bits (461), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 128/495 (25%), Positives = 235/495 (47%), Gaps = 16/495 (3%)
Query: 29 NSFTFPLVLKACANINSIWDGKRVHSHVLKVG--FQQDAFVQTGLIDMYSKCSDFVSSRK 86
+S+ L+ C G+ VH+ V++ G Q D F L++ Y+K ++R+
Sbjct: 44 DSYACARFLQRCIARGDARAGRAVHARVVQRGGVAQLDTFCANVLLNFYAKLGPLATARR 103
Query: 87 VLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSV----VSG 142
+ D MP R R VS+ +++ ++ +EA+ + + + G E++ ++ V+
Sbjct: 104 LFDGMPERNR--VSFVTLMQGYALRGEFEEALELFRRLQREGHEVNHFVLTTILKVLVTM 161
Query: 143 CSFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTI 202
+ +H C KLG N + +++ Y+ G V AR +FD I V+WT +
Sbjct: 162 DAPGLACGIHACACKLGHDRNAF-VGTALIDAYSLCGAVCHARCVFDGIVGKDAVTWTAM 220
Query: 203 IGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGY 262
+ Y A ++MR P+ V + + + + L +H +K+ Y
Sbjct: 221 VSCYSENDIPEYALNTFSKMRMTGFKPNPFVLTSALKAAVCLSSALLGKGIHGCSVKTLY 280
Query: 263 NNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKR 322
+ E + L+ MY KCGD+E A +F+ + V LW+ +I YAQ +A +F R
Sbjct: 281 DTEPHVGGALLDMYAKCGDIEDAHAIFEMIPHDDVILWSFLISRYAQSCQNEQAFEMFLR 340
Query: 323 LLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGR 382
++++ V PNE +L+ L ACA + L G++I + G ES V +L+ M++KC
Sbjct: 341 MMRSFVVPNEFSLSGVLQACANIAFLELGEQIHNLAIKLGYESELFVGNALMDMYAKCRN 400
Query: 383 INKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILS 442
+ + E+F + D + W+ +I GY G + AL++F++M+ L V ++S+L
Sbjct: 401 MENSLEIFSSLQDANEVSWNTIIVGYCQSGFAEDALSVFHEMRAAHMLSTQ-VTFSSVLR 459
Query: 443 ACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLC--LVDLLGRAGRFDLALKTIHEMPVEV 500
AC+++ + + ++ + +I +C L+D + G ALK + E VE
Sbjct: 460 ACANTSSIKHAVQIHSLIEKSTFNNDTI---VCNSLIDTYAKCGFIRDALK-VFESIVEC 515
Query: 501 QAQVWAPLLSACMKH 515
W ++SA H
Sbjct: 516 DVVSWNSIISAYALH 530
>gi|147770185|emb|CAN69881.1| hypothetical protein VITISV_024112 [Vitis vinifera]
Length = 734
Score = 334 bits (856), Expect = 9e-89, Method: Compositional matrix adjust.
Identities = 181/582 (31%), Positives = 311/582 (53%), Gaps = 8/582 (1%)
Query: 6 TNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDA 65
+ G +E M V ++ + +AC + S+ DG+ +H + +
Sbjct: 63 SKQGKLKEAHDFLKEMDDADVSVTPHSYQCLFEACGKLRSLADGRLIHDRLRRTVKNPSG 122
Query: 66 FVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMW 125
++ L+ MY C + +KV DEM ++++VSW +ISA+++ ++AI + +M
Sbjct: 123 SIENCLLRMYCDCGSXIDVQKVFDEM--LMKNLVSWVIVISAYAKNGELEKAIRLFSDMQ 180
Query: 126 VLGLELSASTFVSVVSGC---SFRQ-GISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKV 181
G+ +++ ++S++ C SF + G MH V + LN I + ++ +MY + G +
Sbjct: 181 ASGIRPNSAVYMSLLQSCLGPSFLELGKQMHSHVIR-AQLNANITVETAICNMYVRCGWL 239
Query: 182 NEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGC 241
A+ +FD + + V+WT ++ GY + A L +M V D VF ++ C
Sbjct: 240 EGAKLVFDGMDAQNAVTWTGLMVGYTQAKKLEVALELFARMAMEGVELDEFVFSIVLKVC 299
Query: 242 AQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWT 301
+ + + +HS ++K G +E + LV Y KCGD+E A R F + E + W+
Sbjct: 300 CXLEDWDMGKQIHSHIVKLGXESEVSVGTPLVDFYVKCGDIESAYRSFGRISEPNDVSWS 359
Query: 302 SMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLN 361
++I G++Q G + + +F L V N + ACA +L+ G + +
Sbjct: 360 ALISGFSQSGRLEDCIKIFTSLRSEGVVLNSFIYTSVFQACAAQANLNMGSQAHGDAIKR 419
Query: 362 GLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLF 421
GL S +++++ M+SKCGR++ A+ FE + + D W+A+I+GYA HG +AL F
Sbjct: 420 GLVSYLYGESAMVTMYSKCGRLDYARRAFESIDEPDAVAWTAIISGYAYHGNAAEALGFF 479
Query: 422 YKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLG 481
+MQ G++P+AV + ++L+ACSHSG+V + + SM ++G++P+I+HY C++D
Sbjct: 480 RRMQSY-GVRPNAVTFIAVLTACSHSGLVAEAKQYLGSMSRDYGVKPTIDHYDCMIDTYS 538
Query: 482 RAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYIL 541
RAG AL+ I+ MP E A W LL C H +++LG+ AA+NL L+PG T YIL
Sbjct: 539 RAGLLXEALELINRMPFEPDAMSWKSLLGGCWAHCDLKLGKIAAENLFRLDPGDTAGYIL 598
Query: 542 MANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQ 583
+ NL+++ G W+EA R LM +R L KE S + + G V
Sbjct: 599 LFNLYSAFGKWEEAGHVRKLMAERELKKEVSCSWISVKGQVH 640
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 104/212 (49%), Gaps = 11/212 (5%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+I + +G E+ + ++S+ GV NSF + V +ACA ++ G + H +K G
Sbjct: 361 LISGFSQSGRLEDCIKIFTSLRSEGVVLNSFIYTSVFQACAAQANLNMGSQAHGDAIKRG 420
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+ ++ ++ MYSKC +R+ + + V+W +IIS ++ EA+
Sbjct: 421 LVSYLYGESAMVTMYSKCGRLDYARRAFES--IDEPDAVAWTAIISGYAYHGNAAEALGF 478
Query: 121 LKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGLLNNE------IPLANSVMSM 174
+ M G+ +A TF++V++ CS G+ Y LG ++ + I + ++
Sbjct: 479 FRRMQSYGVRPNAVTFIAVLTACS-HSGLVAEAKQY-LGSMSRDYGVKPTIDHYDCMIDT 536
Query: 175 YAKFGKVNEARSIFDEIG-ETSIVSWTTIIGG 205
Y++ G + EA + + + E +SW +++GG
Sbjct: 537 YSRAGLLXEALELINRMPFEPDAMSWKSLLGG 568
>gi|280967731|gb|ACZ98537.1| PPR motif protein [Malus x domestica]
Length = 751
Score = 334 bits (856), Expect = 9e-89, Method: Compositional matrix adjust.
Identities = 203/613 (33%), Positives = 326/613 (53%), Gaps = 39/613 (6%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI NG EE + + M + GV T L A AN+ ++ DGK+ H+ + G
Sbjct: 171 MIVGYVQNGLNEEAIEVFYEMREEGVEPTQVTLSSFLSASANLGALQDGKQGHAIAVICG 230
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+ + + LI+ YSK + V M + VV+WN +IS + + D+A+ +
Sbjct: 231 IEMTTNLGSSLINFYSKVGLIEDAESVFSRMLEK--DVVTWNLLISGYVQIGEVDKALNM 288
Query: 121 LKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
M + L + T +++S + + G HC + L +++ + +S++ MYA
Sbjct: 289 CHLMRLENLRFDSVTLATLMSAFADMRNLKLGKEGHCYCIRNNL-ESDVVVVSSIVDMYA 347
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K K+ AR +F+ ++ W T++ + +G+ EA L QM+ SV P+++ + +
Sbjct: 348 KCEKIGCARRVFNSSITKDLILWNTMLAAFAELGHSGEALNLFYQMQLESVPPNVISWNS 407
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
LILG L SG NE M+ + L + + +
Sbjct: 408 LILG----------------FLNSGQVNEAK------DMFLQMQSLGV---------QPN 436
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEE 356
+ WT++I G A+ G+ EA+ F+R+ + V+PN ++ L AC L SL G+ +
Sbjct: 437 LVTWTTLISGLARSGFGYEAILTFQRMQEAGVKPNVVSIIGVLLACINLASLQIGRALHG 496
Query: 357 YIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQ 416
Y++ + L + + TSL+ M++KCG ++AK VF+ +PDK+L +++AMI+G+A+HG +
Sbjct: 497 YLIRHSLYLSIPIATSLVDMYAKCGDRDQAKRVFDMIPDKELPIYNAMISGFALHGQAVE 556
Query: 417 ALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCL 476
AL L Y+ EGLKPD + +T+ L ACSH+ MV +GL F M SN I PSIEHY C+
Sbjct: 557 ALAL-YRCLKEEGLKPDNITFTNALYACSHAMMVSEGLELFVDMVSNHNINPSIEHYGCM 615
Query: 477 VDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGST 536
V LL R G D A I MP + Q+ LL+AC +H+ +EL EY + LL L P ++
Sbjct: 616 VSLLSRCGDLDEAFGLISAMPYKPDVQILGSLLAACREHNKIELEEYLSNQLLKLQPDNS 675
Query: 537 GNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSV 596
GNY+ M+N + +AG W E R LM +R L K PG S +++ + VFVAGD+SH +
Sbjct: 676 GNYVAMSNAYAAAGRWDEVKKVRQLMKERGLRKIPGCSWIQVGEELNVFVAGDKSHPETE 735
Query: 597 DIRKTLKELHIKL 609
+I TL L +++
Sbjct: 736 EIYTTLALLLMEI 748
Score = 191 bits (486), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 150/543 (27%), Positives = 267/543 (49%), Gaps = 31/543 (5%)
Query: 36 VLKACANINSIWDGKRVHSHVLKVG--FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPV 93
+L+ C ++ G+++H+ ++K G F + +++T L+ Y+KC + +S + V
Sbjct: 16 LLQGCVYERALHTGRQIHAQIVKKGAIFAMNEYIETKLVIFYAKCDNPEASNSLFRR--V 73
Query: 94 RLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCSFRQGISMHC 153
RL++V SW ++I + R EA+L KEM GL +V+ C + I +
Sbjct: 74 RLKNVFSWAAVIGLNCRKGFYQEALLGFKEMQENGLLPDNFVLPNVLKACGGLEWIRIGK 133
Query: 154 CVYKLGLLNNEIPLANSVMSMYA-KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNV 212
V+ L V Y K + + + + V+W ++I GYV G
Sbjct: 134 VVHGL------------VSCGYVWKMWGGGGCKKGVCGMPQRNAVAWNSMIVGYVQNGLN 181
Query: 213 NEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLL 272
EA + +MR V P V + + A +G L H++ + G L + L
Sbjct: 182 EEAIEVFYEMREEGVEPTQVTLSSFLSASANLGALQDGKQGHAIAVICGIEMTTNLGSSL 241
Query: 273 VSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNE 332
++ Y+K G +E A VF +LEK V W +I GY Q+G +A+N+ + ++R +
Sbjct: 242 INFYSKVGLIEDAESVFSRMLEKDVVTWNLLISGYVQIGEVDKALNMCHLMRLENLRFDS 301
Query: 333 ATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFER 392
TLAT +SA A++ +L GKE Y + N LES+ V +S++ M++KC +I A+ VF
Sbjct: 302 VTLATLMSAFADMRNLKLGKEGHCYCIRNNLESDVVVVSSIVDMYAKCEKIGCARRVFNS 361
Query: 393 VPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDD 452
KDL +W+ M+ +A G +ALNLFY+MQ +E + P+ + + S++ +SG V++
Sbjct: 362 SITKDLILWNTMLAAFAELGHSGEALNLFYQMQ-LESVPPNVISWNSLILGFLNSGQVNE 420
Query: 453 GLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAG---RFDLALKTIHEMPVEVQAQVWAPLL 509
F MQS G++P++ + L+ L R+G L + + E V+ +L
Sbjct: 421 AKDMFLQMQS-LGVQPNLVTWTTLISGLARSGFGYEAILTFQRMQEAGVKPNVVSIIGVL 479
Query: 510 SACMKHHNVELGE----YAAKNLLTLN-PGSTGNYILMANLFTSAGMWKEAATARGLMDD 564
AC+ ++++G Y ++ L L+ P +T + +++ G +A ++ D
Sbjct: 480 LACINLASLQIGRALHGYLIRHSLYLSIPIATS----LVDMYAKCGDRDQAKRVFDMIPD 535
Query: 565 RRL 567
+ L
Sbjct: 536 KEL 538
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 140/515 (27%), Positives = 239/515 (46%), Gaps = 63/515 (12%)
Query: 9 GSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQ 68
G ++E L + M + G+ ++F P VLKAC + I GK VH V
Sbjct: 92 GFYQEALLGFKEMQENGLLPDNFVLPNVLKACGGLEWIRIGKVVH-----------GLVS 140
Query: 69 TGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLG 128
G + K +K + MP R+ V+WNS+I + + LN+EAI V EM G
Sbjct: 141 CGYV---WKMWGGGGCKKGVCGMPQ--RNAVAWNSMIVGYVQNGLNEEAIEVFYEMREEG 195
Query: 129 LELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEA 184
+E + T S +S + + G H G + L +S+++ Y+K G + +A
Sbjct: 196 VEPTQVTLSSFLSASANLGALQDGKQGHAIAVICG-IEMTTNLGSSLINFYSKVGLIEDA 254
Query: 185 RSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQV 244
S+F + E +V+W +I GYV +G V++A +C+ MR ++ D V L+ A +
Sbjct: 255 ESVFSRMLEKDVVTWNLLISGYVQIGEVDKALNMCHLMRLENLRFDSVTLATLMSAFADM 314
Query: 245 GNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMI 304
NL L H +++ ++ + + +V MY KC + ARRVF++ + K + LW +M+
Sbjct: 315 RNLKLGKEGHCYCIRNNLESDVVVVSSIVDMYAKCEKIGCARRVFNSSITKDLILWNTML 374
Query: 305 GGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLE 364
+A+LG+ EA+NLF ++ SV PN +
Sbjct: 375 AAFAELGHSGEALNLFYQMQLESVPPNVISW----------------------------- 405
Query: 365 SNRQVQTSLIHMFSKCGRINKAKEVFERVP----DKDLAVWSAMINGYAIHGMGDQALNL 420
SLI F G++N+AK++F ++ +L W+ +I+G A G G +A+
Sbjct: 406 ------NSLILGFLNSGQVNEAKDMFLQMQSLGVQPNLVTWTTLISGLARSGFGYEAILT 459
Query: 421 FYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLL 480
F +MQ G+KP+ V +L AC + + G + + + + SI LVD+
Sbjct: 460 FQRMQEA-GVKPNVVSIIGVLLACINLASLQIGRALHGYLIRH-SLYLSIPIATSLVDMY 517
Query: 481 GRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKH 515
+ G D A K + +M + + ++ ++S H
Sbjct: 518 AKCGDRDQA-KRVFDMIPDKELPIYNAMISGFALH 551
>gi|302766259|ref|XP_002966550.1| hypothetical protein SELMODRAFT_399 [Selaginella moellendorffii]
gi|300165970|gb|EFJ32577.1| hypothetical protein SELMODRAFT_399 [Selaginella moellendorffii]
Length = 732
Score = 334 bits (856), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 182/554 (32%), Positives = 311/554 (56%), Gaps = 17/554 (3%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI +G +E L M Q G+ T+ +L AC++ + +GK +H V+ +G
Sbjct: 188 MISGYAQSGDCKEGLRCLWRMQQDGLSPTKVTYATLLNACSSGEDLGEGKSIHRSVVDMG 247
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+D V++ L+ MY KC ++ V R+ ++WN+II A++R + +A+
Sbjct: 248 LDRDEVVKSFLLGMYGKCGSLEDVKR--SSCEVHERNTIAWNTIIGAYARYSDHFQALRS 305
Query: 121 LKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
++M + G++ A TFV ++ CS QGI +H + +LG I + NS+ +MYA
Sbjct: 306 FQQMQLQGVKADAVTFVLMLGTCSSPAHLAQGILLHDWISQLGF--ESIIVHNSLTAMYA 363
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K G ++ AR +F+ + + VSW ++I + G +A +M+ PD V ++
Sbjct: 364 KCGSLDAARKMFEGMPSRNSVSWNSLISAAIQHGCYADAHKFFQRMKLEGSRPDEVTCIS 423
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
++ C + N S+H ++++SG++ + N L+ MY K GD E AR VFDA+ E++
Sbjct: 424 MLDACTKQANAKEGSSIHQMVVESGFDKRTGVANALIFMYAKLGDHEAARNVFDAMAERN 483
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAEL-GSLSKGKEIE 355
W +++ Y + G +AV +F K V ++ T L AC+ L G L+ GK I
Sbjct: 484 TVSWNTILAAYVEKGLNRDAVEMF---WKMDVARDKVTYVAALDACSGLAGGLAHGKLIH 540
Query: 356 EYIVLNGLESNR---QVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHG 412
Y++ +G SNR T+L++M+ KCG + +A+++F+ + +D+ W+++I YA H
Sbjct: 541 GYMLDHGF-SNRLDTVAATALVNMYGKCGSLQEARKIFDEMLHRDVVTWTSLIVAYAQHS 599
Query: 413 MGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEH 472
+QAL L M+ +G+K D VV+ SILS C HSG++++G +F SM ++GI P +EH
Sbjct: 600 EIEQALKLVKIMEQ-DGVKVDDVVFLSILSGCDHSGLLEEGCKYFVSMIDDYGISPRLEH 658
Query: 473 YLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLN 532
Y C++D+LGRAG DLA K + +P ++VW LL+AC H N E G+ AA+ + L+
Sbjct: 659 YNCIIDVLGRAGHLDLAEKLVDRLPSRSDSKVWMTLLAACRMHGNPERGKRAARRITLLD 718
Query: 533 PGSTGNYILMANLF 546
P Y++++N++
Sbjct: 719 PSIPAAYVVLSNIY 732
Score = 219 bits (558), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 135/501 (26%), Positives = 255/501 (50%), Gaps = 10/501 (1%)
Query: 13 ETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLI 72
+ L Y M GV +S TF L+AC ++ DG++VH+++ + G + D + LI
Sbjct: 1 QALELYKRMQLEGVRPDSVTFVTCLRACTVEGALDDGRKVHAYIRESGLETDIYAANALI 60
Query: 73 DMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSR-ACLNDEAILVLKEMWVLGLEL 131
+MY KC + ++ M +VVSW S+I ++ L E++L+ ++M + G+
Sbjct: 61 NMYGKCRSPEDAFQLFSRMES--PNVVSWTSVIGNFAQYGHLGRESVLLFRKMELEGIRP 118
Query: 132 SASTFVSVVSGCSFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEI 191
+ T V+V+ C+ G +H V + G ++ + L N+++ MY K G V+EA + E+
Sbjct: 119 NLITMVAVLRACNLTDGRQVHGYVLEAG-MSLDTSLGNALVDMYCKTGDVDEADLVLREM 177
Query: 192 GETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLAL 251
+ ++SW +I GY G+ E +M++ ++P V + L+ C+ +L
Sbjct: 178 PKRDVISWNIMISGYAQSGDCKEGLRCLWRMQQDGLSPTKVTYATLLNACSSGEDLGEGK 237
Query: 252 SMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLG 311
S+H ++ G + ++ + + L+ MY KCG LE +R V E++ W ++IG YA+
Sbjct: 238 SIHRSVVDMGLDRDEVVKSFLLGMYGKCGSLEDVKRSSCEVHERNTIAWNTIIGAYARYS 297
Query: 312 YPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQT 371
+A+ F+++ V+ + T L C+ L++G + ++I G ES V
Sbjct: 298 DHFQALRSFQQMQLQGVKADAVTFVLMLGTCSSPAHLAQGILLHDWISQLGFESI-IVHN 356
Query: 372 SLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLK 431
SL M++KCG ++ A+++FE +P ++ W+++I+ HG A F +M+ +EG +
Sbjct: 357 SLTAMYAKCGSLDAARKMFEGMPSRNSVSWNSLISAAIQHGCYADAHKFFQRMK-LEGSR 415
Query: 432 PDAVVYTSILSACSHSGMVDDGLSFFKS-MQSNFGIEPSIEHYLCLVDLLGRAGRFDLAL 490
PD V S+L AC+ +G S + ++S F + + L+ + + G + A
Sbjct: 416 PDEVTCISMLDACTKQANAKEGSSIHQMVVESGFDKRTGVAN--ALIFMYAKLGDHE-AA 472
Query: 491 KTIHEMPVEVQAQVWAPLLSA 511
+ + + E W +L+A
Sbjct: 473 RNVFDAMAERNTVSWNTILAA 493
Score = 178 bits (452), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 118/405 (29%), Positives = 200/405 (49%), Gaps = 14/405 (3%)
Query: 116 EAILVLKEMWVLGLELSASTFVSVVSGCSFR----QGISMHCCVYKLGLLNNEIPLANSV 171
+A+ + K M + G+ + TFV+ + C+ G +H + + GL +I AN++
Sbjct: 1 QALELYKRMQLEGVRPDSVTFVTCLRACTVEGALDDGRKVHAYIRESGL-ETDIYAANAL 59
Query: 172 MSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNV-NEAFGLCNQMRRMSVTPD 230
++MY K +A +F + ++VSWT++IG + G++ E+ L +M + P+
Sbjct: 60 INMYGKCRSPEDAFQLFSRMESPNVVSWTSVIGNFAQYGHLGRESVLLFRKMELEGIRPN 119
Query: 231 LVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFD 290
L+ + ++ C NL +H +L++G + + L N LV MY K GD++ A V
Sbjct: 120 LITMVAVLRAC----NLTDGRQVHGYVLEAGMSLDTSLGNALVDMYCKTGDVDEADLVLR 175
Query: 291 AVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSK 350
+ ++ V W MI GYAQ G E + R+ + + P + T AT L+AC+ L +
Sbjct: 176 EMPKRDVISWNIMISGYAQSGDCKEGLRCLWRMQQDGLSPTKVTYATLLNACSSGEDLGE 235
Query: 351 GKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAI 410
GK I +V GL+ + V++ L+ M+ KCG + K V +++ W+ +I YA
Sbjct: 236 GKSIHRSVVDMGLDRDEVVKSFLLGMYGKCGSLEDVKRSSCEVHERNTIAWNTIIGAYAR 295
Query: 411 HGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSI 470
+ QAL F +MQ ++G+K DAV + +L CS + G+ S G E I
Sbjct: 296 YSDHFQALRSFQQMQ-LQGVKADAVTFVLMLGTCSSPAHLAQGI-LLHDWISQLGFESII 353
Query: 471 EHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKH 515
H L + + G D A K MP + W L+SA ++H
Sbjct: 354 VHN-SLTAMYAKCGSLDAARKMFEGMPSR-NSVSWNSLISAAIQH 396
>gi|15226150|ref|NP_180924.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75101011|sp|P93005.1|PP181_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g33680
gi|1707007|gb|AAC69139.1| hypothetical protein [Arabidopsis thaliana]
gi|330253774|gb|AEC08868.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 727
Score = 334 bits (856), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 195/628 (31%), Positives = 327/628 (52%), Gaps = 13/628 (2%)
Query: 1 MIRNSTNNGSFEETLST---YSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVL 57
+I + NG + + + M + N++T + KA +++ S G++ H+ V+
Sbjct: 86 LITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESSLQSSTVGRQAHALVV 145
Query: 58 KVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEA 117
K+ D +V T L+ MY K KV MP R + +W++++S ++ +EA
Sbjct: 146 KMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPER--NTYTWSTMVSGYATRGRVEEA 203
Query: 118 ILVLKEMWVLGLELSASTFV------SVVSGCSFRQGISMHCCVYKLGLLNNEIPLANSV 171
I V E S S +V S+ + G +HC K GLL + L+N++
Sbjct: 204 IKVFNLFLREKEEGSDSDYVFTAVLSSLAATIYVGLGRQIHCITIKNGLLGF-VALSNAL 262
Query: 172 MSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDL 231
++MY+K +NEA +FD G+ + ++W+ ++ GY G EA L ++M + P
Sbjct: 263 VTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSE 322
Query: 232 VVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDA 291
+ ++ C+ + L +HS LLK G+ LV MY K G L AR+ FD
Sbjct: 323 YTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADARKGFDC 382
Query: 292 VLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKG 351
+ E+ V LWTS+I GY Q EA+ L++R+ + PN+ T+A+ L AC+ L +L G
Sbjct: 383 LQERDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLATLELG 442
Query: 352 KEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIH 411
K++ + + +G + ++L M+SKCG + VF R P+KD+ W+AMI+G + +
Sbjct: 443 KQVHGHTIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNKDVVSWNAMISGLSHN 502
Query: 412 GMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIE 471
G GD+AL LF +M EG++PD V + +I+SACSH G V+ G +F M G++P ++
Sbjct: 503 GQGDEALELFEEML-AEGMEPDDVTFVNIISACSHKGFVERGWFYFNMMSDQIGLDPKVD 561
Query: 472 HYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTL 531
HY C+VDLL RAG+ A + I ++ +W LLSAC H ELG YA + L+ L
Sbjct: 562 HYACMVDLLSRAGQLKEAKEFIESANIDHGLCLWRILLSACKNHGKCELGVYAGEKLMAL 621
Query: 532 NPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRS 591
+ Y+ ++ ++T+ G ++ M ++KE G S +E+ VFV GD
Sbjct: 622 GSRESSTYVQLSGIYTALGRMRDVERVWKHMRANGVSKEVGCSWIELKNQYHVFVVGDTM 681
Query: 592 HHLSVDIRKTLKELHIKLLEAGYIAEAD 619
H + + + + + +++E G++ D
Sbjct: 682 HPMIEETKDLVCLVSRQMIEEGFVTVLD 709
Score = 189 bits (479), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 147/583 (25%), Positives = 274/583 (46%), Gaps = 50/583 (8%)
Query: 18 YSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSK 77
+ S QT ++ ++ T L + ++ G+ VH +++ G L++ Y+K
Sbjct: 2 HPSTFQTELNPHTSTLLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAK 61
Query: 78 CSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVL---KEMWVLGLELSAS 134
C + + + + + VVSWNS+I+ +S+ + V+ +EM + +A
Sbjct: 62 CGKLAKAHSIFN--AIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAY 119
Query: 135 TFVSVVSGCSFRQ----GISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDE 190
T + S Q G H V K+ +I + S++ MY K G V + +F
Sbjct: 120 TLAGIFKAESSLQSSTVGRQAHALVVKMSSF-GDIYVDTSLVGMYCKAGLVEDGLKVFAY 178
Query: 191 IGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSV--TPDLVVFLNLILGCAQVGNLF 248
+ E + +W+T++ GY G V EA + N R + VF ++ A +
Sbjct: 179 MPERNTYTWSTMVSGYATRGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAATIYVG 238
Query: 249 LALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYA 308
L +H + +K+G L N LV+MY+KC L A ++FD+ +++ W++M+ GY+
Sbjct: 239 LGRQIHCITIKNGLLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYS 298
Query: 309 QLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQ 368
Q G EAV LF R+ ++P+E T+ L+AC+++ L +GK++ +++ G E +
Sbjct: 299 QNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLF 358
Query: 369 VQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVE 428
T+L+ M++K G + A++ F+ + ++D+A+W+++I+GY + ++AL L+ +M+
Sbjct: 359 ATTALVDMYAKAGCLADARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRMK-TA 417
Query: 429 GLKPDAVVYTSILSACSHSGMVDDGLSFF-KSMQSNFGIEPSIEHYL------------- 474
G+ P+ S+L ACS ++ G +++ FG+E I L
Sbjct: 418 GIIPNDPTMASVLKACSSLATLELGKQVHGHTIKHGFGLEVPIGSALSTMYSKCGSLEDG 477
Query: 475 ----------------CLVDLLGRAGRFDLALKTIHEM---PVEVQAQVWAPLLSACMKH 515
++ L G+ D AL+ EM +E + ++SAC
Sbjct: 478 NLVFRRTPNKDVVSWNAMISGLSHNGQGDEALELFEEMLAEGMEPDDVTFVNIISACSHK 537
Query: 516 HNVELGEY---AAKNLLTLNPGSTGNYILMANLFTSAGMWKEA 555
VE G + + + L+P +Y M +L + AG KEA
Sbjct: 538 GFVERGWFYFNMMSDQIGLDP-KVDHYACMVDLLSRAGQLKEA 579
>gi|15231358|ref|NP_187990.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75273354|sp|Q9LIC3.1|PP227_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial; Flags: Precursor
gi|9294022|dbj|BAB01925.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332641888|gb|AEE75409.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 628
Score = 334 bits (856), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 178/518 (34%), Positives = 289/518 (55%), Gaps = 6/518 (1%)
Query: 109 SRACLNDEAILVLKEMWVLGLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNE 164
S+ C N L EM +LG E+ + ++++ C + R G +H + K L
Sbjct: 28 SQLCSNGRLQEALLEMAMLGPEMGFHGYDALLNACLDKRALRDGQRVHAHMIKTRYLPAT 87
Query: 165 IPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRR 224
L ++ Y K + +AR + DE+ E ++VSWT +I Y G+ +EA + +M R
Sbjct: 88 Y-LRTRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALTVFAEMMR 146
Query: 225 MSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLEL 284
P+ F ++ C + L L +H L++K Y++ + + L+ MY K G ++
Sbjct: 147 SDGKPNEFTFATVLTSCIRASGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKE 206
Query: 285 ARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAE 344
AR +F+ + E+ V T++I GYAQLG EA+ +F RL + PN T A+ L+A +
Sbjct: 207 AREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTALSG 266
Query: 345 LGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAM 404
L L GK+ +++ L +Q SLI M+SKCG ++ A+ +F+ +P++ W+AM
Sbjct: 267 LALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPERTAISWNAM 326
Query: 405 INGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSM-QSN 463
+ GY+ HG+G + L LF M+ + +KPDAV ++LS CSH M D GL+ F M
Sbjct: 327 LVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGRMEDTGLNIFDGMVAGE 386
Query: 464 FGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEY 523
+G +P EHY C+VD+LGRAGR D A + I MP + A V LL AC H +V++GE
Sbjct: 387 YGTKPGTEHYGCIVDMLGRAGRIDEAFEFIKRMPSKPTAGVLGSLLGACRVHLSVDIGES 446
Query: 524 AAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQ 583
+ L+ + P + GNY++++NL+ SAG W + R +M + +TKEPG S ++ + ++
Sbjct: 447 VGRRLIEIEPENAGNYVILSNLYASAGRWADVNNVRAMMMQKAVTKEPGRSWIQHEQTLH 506
Query: 584 VFVAGDRSHHLSVDIRKTLKELHIKLLEAGYIAEADIV 621
F A DR+H ++ +KE+ IK+ +AGY+ + V
Sbjct: 507 YFHANDRTHPRREEVLAKMKEISIKMKQAGYVPDLSCV 544
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 125/414 (30%), Positives = 221/414 (53%), Gaps = 16/414 (3%)
Query: 7 NNGSFEETLSTYSSM-LQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDA 65
+NG +E L + + + G HG + +L AC + ++ DG+RVH+H++K +
Sbjct: 32 SNGRLQEALLEMAMLGPEMGFHG----YDALLNACLDKRALRDGQRVHAHMIKTRYLPAT 87
Query: 66 FVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMW 125
+++T L+ Y KC +RKVLDEMP ++VVSW ++IS +S+ + EA+ V EM
Sbjct: 88 YLRTRLLIFYGKCDCLEDARKVLDEMPE--KNVVSWTAMISRYSQTGHSSEALTVFAEMM 145
Query: 126 VLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGL---LNNEIPLANSVMSMYAKFGKVN 182
+ + TF +V++ C G+ + ++ L + ++ I + +S++ MYAK G++
Sbjct: 146 RSDGKPNEFTFATVLTSCIRASGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIK 205
Query: 183 EARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCA 242
EAR IF+ + E +VS T II GY +G EA + +++ ++P+ V + +L+ +
Sbjct: 206 EAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTALS 265
Query: 243 QVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTS 302
+ L H +L+ L N L+ MY+KCG+L ARR+FD + E++ W +
Sbjct: 266 GLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPERTAISWNA 325
Query: 303 MIGGYAQLGYPSEAVNLFKRLLK--TSVRPNEATLATTLSACAELGSLSKGKEIEEYIVL 360
M+ GY++ G E + LF RL++ V+P+ TL LS C+ G I + +V
Sbjct: 326 MLVGYSKHGLGREVLELF-RLMRDEKRVKPDAVTLLAVLSGCSHGRMEDTGLNIFDGMVA 384
Query: 361 N--GLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLA-VWSAMINGYAIH 411
G + + ++ M + GRI++A E +R+P K A V +++ +H
Sbjct: 385 GEYGTKPGTEHYGCIVDMLGRAGRIDEAFEFIKRMPSKPTAGVLGSLLGACRVH 438
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 74/252 (29%), Positives = 128/252 (50%), Gaps = 16/252 (6%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI + G E L+ ++ M+++ N FTF VL +C + + GK++H ++K
Sbjct: 124 MISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHGLIVKWN 183
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+ FV + L+DMY+K +R++ + +P R VVS +II+ +++ L++EA+ +
Sbjct: 184 YDSHIFVGSSLLDMYAKAGQIKEAREIFECLPE--RDVVSCTAIIAGYAQLGLDEEALEM 241
Query: 121 LKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIP----LANSVM 172
+ G+ + T+ S+++ S G HC V L E+P L NS++
Sbjct: 242 FHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHV-----LRRELPFYAVLQNSLI 296
Query: 173 SMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMR-RMSVTPDL 231
MY+K G ++ AR +FD + E + +SW ++ GY G E L MR V PD
Sbjct: 297 DMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDA 356
Query: 232 VVFLNLILGCAQ 243
V L ++ GC+
Sbjct: 357 VTLLAVLSGCSH 368
>gi|297833652|ref|XP_002884708.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330548|gb|EFH60967.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 1028
Score = 334 bits (856), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 195/628 (31%), Positives = 329/628 (52%), Gaps = 13/628 (2%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MIR +NG + + + M +G + + FTF +L CA + + G + HS ++K
Sbjct: 399 MIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAVSHDLEMGSQFHSIIIKKK 458
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
++ FV L+DMY+KC +R++ + M R VSWN+II + + EA +
Sbjct: 459 LTKNLFVGNALVDMYAKCGALEDARQIFEHMCDR--DNVSWNTIIGGYVQDENESEAFDL 516
Query: 121 LKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
M G+ + S + C+ QG +HC K GL + + +S++ MY+
Sbjct: 517 FMRMNSCGIVSDGACLASTLKACTNVHGLYQGKQVHCLSVKCGL-DRVLHTGSSLIDMYS 575
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K G + +AR +F + E S+VS +I GY + N+ EA L +M V P + F
Sbjct: 576 KCGIIEDARKVFSSMPEWSVVSMNALIAGY-SQNNLEEAVVLFQEMLTKGVNPSEITFAT 634
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNE-DPLDNLLVSMYTKCGDLELARRVFDAVLE- 294
++ C + +L L H ++K G+++E + L L+ +Y + A +F +
Sbjct: 635 IVEACHKPESLTLGTQFHGQIIKWGFSSEGEYLGISLLGLYMNSRRMAEACALFSELSSP 694
Query: 295 KSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEI 354
KS+ LWT M+ G++Q G+ EA+ +K + P++AT T L C+ L SL +G+ I
Sbjct: 695 KSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGALPDQATFVTVLRVCSVLSSLREGRAI 754
Query: 355 EEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDK-DLAVWSAMINGYAIHGM 413
I + + +LI M++KCG + + +VF+ + + ++ W+++INGYA +G
Sbjct: 755 HSLIFHLAHDLDELTSNTLIDMYAKCGDMKSSSQVFDEMRRRSNVVSWNSLINGYAKNGY 814
Query: 414 GDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHY 473
+ AL +F M+ + PD + + +L+ACSH+G V DG F+ M +GIE ++H
Sbjct: 815 AEDALKIFDSMRQSH-IMPDEITFLGVLTACSHAGKVSDGRKIFEMMIGQYGIEARVDHV 873
Query: 474 LCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNP 533
C+VDLLGR G A I ++ A++W+ LL AC H + GE AA+ L+ L P
Sbjct: 874 ACMVDLLGRWGYLQEADDFIEAQNLKPDARLWSSLLGACRIHGDDMRGEIAAERLIELEP 933
Query: 534 GSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHH 593
++ Y+L++N++ S G W+EA R M DR + K PG+S +++ +F AGD+SH
Sbjct: 934 QNSSAYVLLSNIYASQGRWEEANALRKAMRDRGVKKVPGYSWIDVGQRRHIFAAGDQSHS 993
Query: 594 LSVDIRKTLKELHIKLLEAGYIAEADIV 621
I L++L+ L++ + DIV
Sbjct: 994 DIGKIEMFLEDLY-DLMKDDAVVNPDIV 1020
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 126/485 (25%), Positives = 225/485 (46%), Gaps = 36/485 (7%)
Query: 13 ETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLI 72
+ L ++ S+ + + N FTF +VL A ++ G+++H ++K+G +++++ L+
Sbjct: 143 KVLRSFVSLFENLIFPNKFTFSIVLSTSARETNVEFGRQIHCSMIKMGLERNSYCGGALV 202
Query: 73 DMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELS 132
DMY+KC +++V D + + V W + S + +A L +EA++V + M G
Sbjct: 203 DMYAKCDRLGDAQRVFD--GIVDPNTVCWTCLFSGYVKAGLPEEAVIVFERMRGEGHRPD 260
Query: 133 ASTFVSVVSGCSFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIG 192
FV+V+ + Y GK+ +AR +F E+
Sbjct: 261 HLAFVTVI--------------------------------NTYISLGKLKDARLLFGEMP 288
Query: 193 ETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALS 252
+V+W +I G+ G A MR+ SV +++ V NL L L
Sbjct: 289 SPDVVAWNVMISGHGKRGCEIVAIEYFLNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLV 348
Query: 253 MHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGY 312
+H+ +K G + + + LVSMY+KC +E A +VF+A+ E++ LW +MI GYA G
Sbjct: 349 VHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEERNDVLWNAMIRGYAHNGE 408
Query: 313 PSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTS 372
+ + LF + + ++ T + LS CA L G + I+ L N V +
Sbjct: 409 SHKVMELFMDMKSSGYNIDDFTFTSLLSTCAVSHDLEMGSQFHSIIIKKKLTKNLFVGNA 468
Query: 373 LIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKP 432
L+ M++KCG + A+++FE + D+D W+ +I GY +A +LF +M G+
Sbjct: 469 LVDMYAKCGALEDARQIFEHMCDRDNVSWNTIIGGYVQDENESEAFDLFMRMNSC-GIVS 527
Query: 433 DAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKT 492
D S L AC++ + G + G++ + L+D+ + G + A K
Sbjct: 528 DGACLASTLKACTNVHGLYQGKQ-VHCLSVKCGLDRVLHTGSSLIDMYSKCGIIEDARKV 586
Query: 493 IHEMP 497
MP
Sbjct: 587 FSSMP 591
Score = 182 bits (461), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 121/389 (31%), Positives = 200/389 (51%), Gaps = 9/389 (2%)
Query: 60 GFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAIL 119
G + D +I+ Y +R + EMP VV+WN +IS H + AI
Sbjct: 256 GHRPDHLAFVTVINTYISLGKLKDARLLFGEMPSP--DVVAWNVMISGHGKRGCEIVAIE 313
Query: 120 VLKEMWVLGLELSASTFVSVVSG----CSFRQGISMHCCVYKLGLLNNEIPLANSVMSMY 175
M ++ + ST SV+S + G+ +H KLGL +N I + +S++SMY
Sbjct: 314 YFLNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASN-IYVGSSLVSMY 372
Query: 176 AKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFL 235
+K K+ A +F+ + E + V W +I GY + G ++ L M+ D F
Sbjct: 373 SKCEKMEAAAKVFEALEERNDVLWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFT 432
Query: 236 NLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEK 295
+L+ CA +L + HS+++K + N LV MY KCG LE AR++F+ + ++
Sbjct: 433 SLLSTCAVSHDLEMGSQFHSIIIKKKLTKNLFVGNALVDMYAKCGALEDARQIFEHMCDR 492
Query: 296 SVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIE 355
W ++IGGY Q SEA +LF R+ + + A LA+TL AC + L +GK++
Sbjct: 493 DNVSWNTIIGGYVQDENESEAFDLFMRMNSCGIVSDGACLASTLKACTNVHGLYQGKQVH 552
Query: 356 EYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGD 415
V GL+ +SLI M+SKCG I A++VF +P+ + +A+I GY+ + + +
Sbjct: 553 CLSVKCGLDRVLHTGSSLIDMYSKCGIIEDARKVFSSMPEWSVVSMNALIAGYSQNNL-E 611
Query: 416 QALNLFYKMQHVEGLKPDAVVYTSILSAC 444
+A+ LF +M +G+ P + + +I+ AC
Sbjct: 612 EAVVLFQEML-TKGVNPSEITFATIVEAC 639
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 122/458 (26%), Positives = 209/458 (45%), Gaps = 57/458 (12%)
Query: 49 GKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAH 108
GK VHS L +G + + ++D+Y+KC+ + K + + + V +WNS++S +
Sbjct: 79 GKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFNSLE---KDVTAWNSMLSMY 135
Query: 109 SRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCSFRQ-----GISMHCCVYKLGLLNN 163
S + + ++ + + TF S+V S R+ G +HC + K+GL N
Sbjct: 136 SSIGQPGKVLRSFVSLFENLIFPNKFTF-SIVLSTSARETNVEFGRQIHCSMIKMGLERN 194
Query: 164 EIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMR 223
+++ MYAK ++ +A+ +FD I + + V WT + GYV G EA + +MR
Sbjct: 195 SY-CGGALVDMYAKCDRLGDAQRVFDGIVDPNTVCWTCLFSGYVKAGLPEEAVIVFERMR 253
Query: 224 RMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLE 283
PD + F+ +I + Y G L+
Sbjct: 254 GEGHRPDHLAFVTVI-----------------------------------NTYISLGKLK 278
Query: 284 LARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACA 343
AR +F + V W MI G+ + G A+ F + K+SV+ +TL + LSA
Sbjct: 279 DARLLFGEMPSPDVVAWNVMISGHGKRGCEIVAIEYFLNMRKSSVKSTRSTLGSVLSAIG 338
Query: 344 ELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSA 403
+ +L G + + GL SN V +SL+ M+SKC ++ A +VFE + +++ +W+A
Sbjct: 339 IVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEERNDVLWNA 398
Query: 404 MINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFF-----K 458
MI GYA +G + + LF M+ G D +TS+LS C+ S ++ G F K
Sbjct: 399 MIRGYAHNGESHKVMELFMDMKS-SGYNIDDFTFTSLLSTCAVSHDLEMGSQFHSIIIKK 457
Query: 459 SMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEM 496
+ N + + LVD+ + G + A + M
Sbjct: 458 KLTKNLFVGNA------LVDMYAKCGALEDARQIFEHM 489
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 116/216 (53%), Gaps = 2/216 (0%)
Query: 247 LFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGG 306
L + ++HS L G ++E L N +V +Y KC + A + F++ LEK V W SM+
Sbjct: 76 LRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFNS-LEKDVTAWNSMLSM 134
Query: 307 YAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESN 366
Y+ +G P + + F L + + PN+ T + LS A ++ G++I ++ GLE N
Sbjct: 135 YSSIGQPGKVLRSFVSLFENLIFPNKFTFSIVLSTSARETNVEFGRQIHCSMIKMGLERN 194
Query: 367 RQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQH 426
+L+ M++KC R+ A+ VF+ + D + W+ + +GY G+ ++A+ +F +M+
Sbjct: 195 SYCGGALVDMYAKCDRLGDAQRVFDGIVDPNTVCWTCLFSGYVKAGLPEEAVIVFERMRG 254
Query: 427 VEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQS 462
EG +PD + + ++++ G + D F M S
Sbjct: 255 -EGHRPDHLAFVTVINTYISLGKLKDARLLFGEMPS 289
Score = 108 bits (271), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 95/406 (23%), Positives = 159/406 (39%), Gaps = 88/406 (21%)
Query: 49 GKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAH 108
G+RV+ HVL Q + GL+++ + SRKV DEMP RL
Sbjct: 30 GRRVYGHVLPNHDQ----IHQGLLEICLEQCKLFKSRKVFDEMPHRL------------- 72
Query: 109 SRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGLLNNEIPLA 168
+ R G ++H LG+ ++E L
Sbjct: 73 ---------------------------------ALALRIGKAVHSKSLILGI-DSEGRLG 98
Query: 169 NSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVT 228
N+++ +YAK +V+ A F+ + E + +W +++ Y ++G + + +
Sbjct: 99 NAIVDLYAKCAQVSYAEKQFNSL-EKDVTAWNSMLSMYSSIGQPGKVLRSFVSLFENLIF 157
Query: 229 PDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRV 288
P+ F ++ A+ N+ +H ++K G LV MY KC L A+RV
Sbjct: 158 PNKFTFSIVLSTSARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRLGDAQRV 217
Query: 289 FDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSL 348
FD +++ + WT + GY + G P EAV +F+R+ RP+ T
Sbjct: 218 FDGIVDPNTVCWTCLFSGYVKAGLPEEAVIVFERMRGEGHRPDHLAFVTV---------- 267
Query: 349 SKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGY 408
I YI L G++ A+ +F +P D+ W+ MI+G+
Sbjct: 268 -----INTYISL--------------------GKLKDARLLFGEMPSPDVVAWNVMISGH 302
Query: 409 AIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGL 454
G A+ F M+ +K S+LSA +D GL
Sbjct: 303 GKRGCEIVAIEYFLNMRK-SSVKSTRSTLGSVLSAIGIVANLDLGL 347
>gi|225460143|ref|XP_002275945.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g71490-like [Vitis vinifera]
Length = 748
Score = 334 bits (856), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 188/624 (30%), Positives = 322/624 (51%), Gaps = 42/624 (6%)
Query: 36 VLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRL 95
+L +C ++ S+ +G+++H H++ +GF+Q + L+ YS + V + + + +
Sbjct: 106 LLSSCTDVKSLAEGRQLHGHIISLGFEQHPILVPKLVTFYSAFNLLVDAHVITEN--SNI 163
Query: 96 RSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCV 155
WN +IS++ R +A+ K+M G+ T+ SV+ C + V
Sbjct: 164 LHPFPWNLLISSYVRNGFCQKALSAYKQMVKKGIRPDNFTYPSVLKACGEELDLGFGKEV 223
Query: 156 YK---LGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWT------------ 200
++ + + + N+++SMY K GKV AR +FD+I E VSW
Sbjct: 224 HESINASRIKWSLIVHNALISMYGKCGKVGIARDLFDKIPERDAVSWNSMISVYASMGMW 283
Query: 201 -----------------------TIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNL 237
TI GGY+ GN A L +QMR+ D V +
Sbjct: 284 NEAFELFGSMWAEDIELNIIIWNTIAGGYLRTGNYKGALELLSQMRKCGSHLDSVALIIG 343
Query: 238 ILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSV 297
+ C+ +G+ L +HS ++S + D + N L++MY++C DL+ A +F + KS+
Sbjct: 344 LGACSHIGDAKLGKEIHSFAIRSCFGEVDTVKNALITMYSRCKDLKHAYLLFQLMEAKSL 403
Query: 298 FLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEY 357
W S+I G + EA L + +L + PN T+A+ L CA + +L GKE Y
Sbjct: 404 ITWNSIISGCCHMDRSEEASFLLREMLLFGIEPNYVTIASVLPLCARVANLQHGKEFHCY 463
Query: 358 IVLN-GLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQ 416
+ + + + +L+ M+++ G++ +A+ VF+ + ++D +++MI GY + G G
Sbjct: 464 MTRREDFKDHLLLWNALVDMYARSGKVLEARRVFDMLGERDKMTYTSMIAGYGMQGEGQA 523
Query: 417 ALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCL 476
AL LF +M + + +KPD + ++LSACSHSG+V G F+ M+S +G+ P +EH+ C+
Sbjct: 524 ALKLFEEMNNFQ-IKPDHITMIAVLSACSHSGLVTQGQLLFEKMRSLYGLTPHLEHFACM 582
Query: 477 VDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGST 536
DL GRAG + A + I MP + +WA L+ AC H N E+GE+AA+ LL + P +
Sbjct: 583 TDLFGRAGLLNKAKEIIRNMPYKPTPAMWATLIGACRIHRNTEIGEWAAEKLLEMKPENP 642
Query: 537 GNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSV 596
G Y+L+AN++ +AG W + A R M D + K PG + V++ F+ D S+ +
Sbjct: 643 GYYVLIANMYAAAGCWNKLAKVRIFMRDLGVRKAPGCAWVDVGTGFSPFLVDDTSNANAD 702
Query: 597 DIRKTLKELHIKLLEAGYIAEADI 620
+I L+ L + + EAGYI+ D
Sbjct: 703 EIYPLLEGLTMVMKEAGYISSEDF 726
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 124/453 (27%), Positives = 212/453 (46%), Gaps = 45/453 (9%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+I + NG ++ LS Y M++ G+ ++FT+P VLKAC + GK VH +
Sbjct: 172 LISSYVRNGFCQKALSAYKQMVKKGIRPDNFTYPSVLKACGEELDLGFGKEVHESINASR 231
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+ V LI MY KC +R + D++P R VSWNS+IS ++ + +EA +
Sbjct: 232 IKWSLIVHNALISMYGKCGKVGIARDLFDKIPE--RDAVSWNSMISVYASMGMWNEAFEL 289
Query: 121 LKEMWVLGLELSASTFVSVVSGCSFRQG-------------------------ISMHCCV 155
MW +EL+ + + ++G R G I + C
Sbjct: 290 FGSMWAEDIELNIIIW-NTIAGGYLRTGNYKGALELLSQMRKCGSHLDSVALIIGLGACS 348
Query: 156 Y----KLG----------LLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTT 201
+ KLG + N++++MY++ + A +F + S+++W +
Sbjct: 349 HIGDAKLGKEIHSFAIRSCFGEVDTVKNALITMYSRCKDLKHAYLLFQLMEAKSLITWNS 408
Query: 202 IIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLL-KS 260
II G ++ EA L +M + P+ V +++ CA+V NL H + +
Sbjct: 409 IISGCCHMDRSEEASFLLREMLLFGIEPNYVTIASVLPLCARVANLQHGKEFHCYMTRRE 468
Query: 261 GYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLF 320
+ + L N LV MY + G + ARRVFD + E+ +TSMI GY G A+ LF
Sbjct: 469 DFKDHLLLWNALVDMYARSGKVLEARRVFDMLGERDKMTYTSMIAGYGMQGEGQAALKLF 528
Query: 321 KRLLKTSVRPNEATLATTLSACAELGSLSKGKEI-EEYIVLNGLESNRQVQTSLIHMFSK 379
+ + ++P+ T+ LSAC+ G +++G+ + E+ L GL + + + +F +
Sbjct: 529 EEMNNFQIKPDHITMIAVLSACSHSGLVTQGQLLFEKMRSLYGLTPHLEHFACMTDLFGR 588
Query: 380 CGRINKAKEVFERVPDKDL-AVWSAMINGYAIH 411
G +NKAKE+ +P K A+W+ +I IH
Sbjct: 589 AGLLNKAKEIIRNMPYKPTPAMWATLIGACRIH 621
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 92/387 (23%), Positives = 161/387 (41%), Gaps = 41/387 (10%)
Query: 138 SVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGE 193
S++S C S +G +H + LG + I L +++ Y+ F + +A I +
Sbjct: 105 SLLSSCTDVKSLAEGRQLHGHIISLGFEQHPI-LVPKLVTFYSAFNLLVDAHVITENSNI 163
Query: 194 TSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSM 253
W +I YV G +A QM + + PD + +++ C + +L +
Sbjct: 164 LHPFPWNLLISSYVRNGFCQKALSAYKQMVKKGIRPDNFTYPSVLKACGEELDLGFGKEV 223
Query: 254 HSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYP 313
H + S + N L+SMY KCG + +AR +FD + E+ W SMI YA +G
Sbjct: 224 HESINASRIKWSLIVHNALISMYGKCGKVGIARDLFDKIPERDAVSWNSMISVYASMGMW 283
Query: 314 SEAVNLFKRLLKTSVRPN-----------------------------------EATLATT 338
+EA LF + + N L
Sbjct: 284 NEAFELFGSMWAEDIELNIIIWNTIAGGYLRTGNYKGALELLSQMRKCGSHLDSVALIIG 343
Query: 339 LSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDL 398
L AC+ +G GKEI + + + V+ +LI M+S+C + A +F+ + K L
Sbjct: 344 LGACSHIGDAKLGKEIHSFAIRSCFGEVDTVKNALITMYSRCKDLKHAYLLFQLMEAKSL 403
Query: 399 AVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFK 458
W+++I+G ++A L +M + G++P+ V S+L C+ + G F
Sbjct: 404 ITWNSIISGCCHMDRSEEASFLLREML-LFGIEPNYVTIASVLPLCARVANLQHGKEFHC 462
Query: 459 SMQSNFGIEPSIEHYLCLVDLLGRAGR 485
M + + + LVD+ R+G+
Sbjct: 463 YMTRREDFKDHLLLWNALVDMYARSGK 489
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 74/285 (25%), Positives = 142/285 (49%), Gaps = 5/285 (1%)
Query: 181 VNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMR--RMSVTPDLVV--FLN 236
+ A+ F + + I S T + + + GN+ +AF + +R S + DL+V +
Sbjct: 46 LESAQETFTSVDASMIDSLLTSLKEFTSRGNLLDAFKTVSLIRLHASSASQDLIVHPISS 105
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
L+ C V +L +H ++ G+ L LV+ Y+ L A + +
Sbjct: 106 LLSSCTDVKSLAEGRQLHGHIISLGFEQHPILVPKLVTFYSAFNLLVDAHVITENSNILH 165
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEE 356
F W +I Y + G+ +A++ +K+++K +RP+ T + L AC E L GKE+ E
Sbjct: 166 PFPWNLLISSYVRNGFCQKALSAYKQMVKKGIRPDNFTYPSVLKACGEELDLGFGKEVHE 225
Query: 357 YIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQ 416
I + ++ + V +LI M+ KCG++ A+++F+++P++D W++MI+ YA GM ++
Sbjct: 226 SINASRIKWSLIVHNALISMYGKCGKVGIARDLFDKIPERDAVSWNSMISVYASMGMWNE 285
Query: 417 ALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQ 461
A LF M E ++ + +++ +I +G L M+
Sbjct: 286 AFELFGSMW-AEDIELNIIIWNTIAGGYLRTGNYKGALELLSQMR 329
>gi|6714305|gb|AAF26001.1|AC013354_20 F15H18.4 [Arabidopsis thaliana]
Length = 1702
Score = 334 bits (856), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 194/625 (31%), Positives = 338/625 (54%), Gaps = 15/625 (2%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHG----NSFTFPLVLKACANINSIWDGKRVHSHV 56
MIR ++NG EE+ M++ G + T VL CA I GK VH
Sbjct: 614 MIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWA 673
Query: 57 LKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDE 116
+K+ ++ + L+DMYSKC +++ + ++VVSWN+++ S
Sbjct: 674 VKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMN--NNKNVVSWNTMVGGFSAEGDTHG 731
Query: 117 AILVLKEMWVLGLELSAS--TFVSVVSGC---SFRQGIS-MHCCVYKLGLLNNEIPLANS 170
VL++M G ++ A T ++ V C SF + +HC K + NE+ +AN+
Sbjct: 732 TFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNEL-VANA 790
Query: 171 VMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPD 230
++ YAK G ++ A+ +F I ++ SW +IGG+ + + QM+ + PD
Sbjct: 791 FVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPD 850
Query: 231 LVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFD 290
+L+ C+++ +L L +H ++++ + + ++S+Y CG+L + +FD
Sbjct: 851 SFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFD 910
Query: 291 AVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSK 350
A+ +KS+ W ++I GY Q G+P A+ +F++++ ++ ++ AC+ L SL
Sbjct: 911 AMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRL 970
Query: 351 GKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAI 410
G+E Y + + LE + + SLI M++K G I ++ +VF + +K A W+AMI GY I
Sbjct: 971 GREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGI 1030
Query: 411 HGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSI 470
HG+ +A+ LF +MQ G PD + + +L+AC+HSG++ +GL + M+S+FG++P++
Sbjct: 1031 HGLAKEAIKLFEEMQRT-GHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNL 1089
Query: 471 EHYLCLVDLLGRAGRFDLALKTI-HEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLL 529
+HY C++D+LGRAG+ D AL+ + EM E +W LLS+C H N+E+GE A L
Sbjct: 1090 KHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGEKVAAKLF 1149
Query: 530 TLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGD 589
L P NY+L++NL+ G W++ R M++ L K+ G S +E++ V FV G+
Sbjct: 1150 ELEPEKPENYVLLSNLYAGLGKWEDVRKVRQRMNEMSLRKDAGCSWIELNRKVFSFVVGE 1209
Query: 590 RSHHLSVDIRKTLKELHIKLLEAGY 614
R +I+ L +K+ + GY
Sbjct: 1210 RFLDGFEEIKSLWSILEMKISKMGY 1234
Score = 215 bits (547), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 138/455 (30%), Positives = 236/455 (51%), Gaps = 13/455 (2%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQT-GVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKV 59
+I + + N ++E L T+ M+ T + + FT+P V+KACA ++ + G VH V+K
Sbjct: 512 VISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKT 571
Query: 60 GFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAIL 119
G +D FV L+ Y + ++ D MP R ++VSWNS+I S ++E+ L
Sbjct: 572 GLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPER--NLVSWNSMIRVFSDNGFSEESFL 629
Query: 120 VLKEMWVL----GLELSASTFVSVVSGCSFRQGISMHCCVYKLGL---LNNEIPLANSVM 172
+L EM +T V+V+ C+ + I + V+ + L+ E+ L N++M
Sbjct: 630 LLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALM 689
Query: 173 SMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRR--MSVTPD 230
MY+K G + A+ IF ++VSW T++GG+ G+ + F + QM V D
Sbjct: 690 DMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKAD 749
Query: 231 LVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFD 290
V LN + C L +H LK + + + N V+ Y KCG L A+RVF
Sbjct: 750 EVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFH 809
Query: 291 AVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSK 350
+ K+V W ++IGG+AQ P +++ ++ + + P+ T+ + LSAC++L SL
Sbjct: 810 GIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRL 869
Query: 351 GKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAI 410
GKE+ +I+ N LE + V S++ ++ CG + + +F+ + DK L W+ +I GY
Sbjct: 870 GKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQ 929
Query: 411 HGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACS 445
+G D+AL +F +M + G++ + + ACS
Sbjct: 930 NGFPDRALGVFRQMV-LYGIQLCGISMMPVFGACS 963
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 117/423 (27%), Positives = 210/423 (49%), Gaps = 16/423 (3%)
Query: 35 LVLKACANINSIWDGKRVHSHVL-KVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPV 93
L+L+A I G+++H V + D + T +I MY+ C SR V D +
Sbjct: 444 LLLQASGKRKDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDAL-- 501
Query: 94 RLRSVVSWNSIISAHSRACLNDEAILVLKEMW-VLGLELSASTFVSVVSGCSFRQ----G 148
R +++ WN++IS++SR L DE + EM L T+ V+ C+ G
Sbjct: 502 RSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIG 561
Query: 149 ISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVN 208
+++H V K GL+ + + + N+++S Y G V +A +FD + E ++VSW ++I + +
Sbjct: 562 LAVHGLVVKTGLVED-VFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSD 620
Query: 209 VGNVNEAFGLCNQMRRM----SVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNN 264
G E+F L +M + PD+ + ++ CA+ + L +H +K +
Sbjct: 621 NGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDK 680
Query: 265 EDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLL 324
E L+N L+ MY+KCG + A+ +F K+V W +M+GG++ G ++ +++L
Sbjct: 681 ELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQML 740
Query: 325 K--TSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGR 382
V+ +E T+ + C L KE+ Y + N V + + ++KCG
Sbjct: 741 AGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGS 800
Query: 383 INKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILS 442
++ A+ VF + K + W+A+I G+A +L+ +M+ + GL PD+ S+LS
Sbjct: 801 LSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMK-ISGLLPDSFTVCSLLS 859
Query: 443 ACS 445
ACS
Sbjct: 860 ACS 862
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 87/341 (25%), Positives = 162/341 (47%), Gaps = 13/341 (3%)
Query: 116 EAILVLKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGLLNNEIPLANSVMSMY 175
+A L+++E LGL L AS + G +H V L N+ L +++MY
Sbjct: 433 DAFLLVRE--ALGLLLQASGKRKDI-----EMGRKIHQLVSGSTRLRNDDVLCTRIITMY 485
Query: 176 AKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQM-RRMSVTPDLVVF 234
A G +++R +FD + ++ W +I Y +E +M + PD +
Sbjct: 486 AMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTY 545
Query: 235 LNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLE 294
+I CA + ++ + L++H L++K+G + + N LVS Y G + A ++FD + E
Sbjct: 546 PCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPE 605
Query: 295 KSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKT----SVRPNEATLATTLSACAELGSLSK 350
+++ W SMI ++ G+ E+ L +++ + P+ ATL T L CA +
Sbjct: 606 RNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGL 665
Query: 351 GKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAI 410
GK + + V L+ + +L+ M+SKCG I A+ +F+ +K++ W+ M+ G++
Sbjct: 666 GKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSA 725
Query: 411 HGMGDQALNLFYKM-QHVEGLKPDAVVYTSILSACSHSGMV 450
G ++ +M E +K D V + + C H +
Sbjct: 726 EGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFL 766
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 62/121 (51%), Gaps = 3/121 (2%)
Query: 335 LATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQ-TSLIHMFSKCGRINKAKEVFERV 393
L L A + + G++I + + + N V T +I M++ CG + ++ VF+ +
Sbjct: 442 LGLLLQASGKRKDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDAL 501
Query: 394 PDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDG 453
K+L W+A+I+ Y+ + + D+ L F +M L PD Y ++ AC +GM D G
Sbjct: 502 RSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKAC--AGMSDVG 559
Query: 454 L 454
+
Sbjct: 560 I 560
>gi|359496846|ref|XP_002272372.2| PREDICTED: uncharacterized protein LOC100258406 [Vitis vinifera]
Length = 1286
Score = 334 bits (856), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 166/475 (34%), Positives = 279/475 (58%), Gaps = 2/475 (0%)
Query: 147 QGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGY 206
QG +H + L+N + L N +++MYAK G +++AR +FDE+ +V+WT +I G+
Sbjct: 105 QGRIVHAHLVDSHFLDNHLVLQNIIVNMYAKCGCLDDARRMFDEMPTKDMVTWTALIAGF 164
Query: 207 VNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNED 266
+A L QM R+ P+ +L+ L +H+ LK GY +
Sbjct: 165 SQNNRPRDALLLFPQMLRLGFQPNHFTLSSLLKASGSEHGLDPGTQLHAFCLKYGYQSSV 224
Query: 267 PLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKT 326
+ + LV MY +CG ++ A+ FD + KS W ++I G+A+ G A++L ++ +
Sbjct: 225 YVGSALVDMYARCGHMDAAQLAFDGMPTKSEVSWNALISGHARKGEGEHALHLLWKMQRK 284
Query: 327 SVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKA 386
+ +P T ++ LSACA +G+L +GK + +++ +GL+ + +L+ M++K G I+ A
Sbjct: 285 NFQPTHFTYSSVLSACASIGALEQGKWVHAHMIKSGLKLIAFIGNTLLDMYAKAGSIDDA 344
Query: 387 KEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSH 446
K VF+R+ D+ W+ M+ G A HG+G + L+ F +M + G++P+ + + +L+ACSH
Sbjct: 345 KRVFDRLVKPDVVSWNTMLTGCAQHGLGKETLDRFEQMLRI-GIEPNEISFLCVLTACSH 403
Query: 447 SGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWA 506
SG++D+GL +F+ M+ + +EP + HY+ VDLLGR G D A + I EMP+E A VW
Sbjct: 404 SGLLDEGLYYFELMKK-YKVEPDVPHYVTFVDLLGRVGLLDRAERFIREMPIEPTAAVWG 462
Query: 507 PLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRR 566
LL AC H N+ELG YAA+ L+P +G +L++N++ SAG W++ A R +M +
Sbjct: 463 ALLGACRMHKNMELGVYAAERAFELDPHDSGPRMLLSNIYASAGRWRDVAKVRKMMKESG 522
Query: 567 LTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKELHIKLLEAGYIAEADIV 621
+ K+P S VEI+ +V +FVA D +H +IR +E+ K+ E GY+ + V
Sbjct: 523 VKKQPACSWVEIENAVHLFVANDETHPRIKEIRGKWEEISGKIKEIGYVPDTSHV 577
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 101/382 (26%), Positives = 196/382 (51%), Gaps = 9/382 (2%)
Query: 36 VLKACANINSIWDGKRVHSHVLKVGFQQDAFV-QTGLIDMYSKCSDFVSSRKVLDEMPVR 94
+LK C + + G+ VH+H++ F + V Q +++MY+KC +R++ DEMP
Sbjct: 93 LLKECTRLGKVEQGRIVHAHLVDSHFLDNHLVLQNIIVNMYAKCGCLDDARRMFDEMPT- 151
Query: 95 LRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCSFRQGI----S 150
+ +V+W ++I+ S+ +A+L+ +M LG + + T S++ G+
Sbjct: 152 -KDMVTWTALIAGFSQNNRPRDALLLFPQMLRLGFQPNHFTLSSLLKASGSEHGLDPGTQ 210
Query: 151 MHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVG 210
+H K G + + + ++++ MYA+ G ++ A+ FD + S VSW +I G+ G
Sbjct: 211 LHAFCLKYG-YQSSVYVGSALVDMYARCGHMDAAQLAFDGMPTKSEVSWNALISGHARKG 269
Query: 211 NVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDN 270
A L +M+R + P + +++ CA +G L +H+ ++KSG + N
Sbjct: 270 EGEHALHLLWKMQRKNFQPTHFTYSSVLSACASIGALEQGKWVHAHMIKSGLKLIAFIGN 329
Query: 271 LLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRP 330
L+ MY K G ++ A+RVFD +++ V W +M+ G AQ G E ++ F+++L+ + P
Sbjct: 330 TLLDMYAKAGSIDDAKRVFDRLVKPDVVSWNTMLTGCAQHGLGKETLDRFEQMLRIGIEP 389
Query: 331 NEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVF 390
NE + L+AC+ G L +G E + +E + + + + + G +++A+
Sbjct: 390 NEISFLCVLTACSHSGLLDEGLYYFELMKKYKVEPDVPHYVTFVDLLGRVGLLDRAERFI 449
Query: 391 ERVP-DKDLAVWSAMINGYAIH 411
+P + AVW A++ +H
Sbjct: 450 REMPIEPTAAVWGALLGACRMH 471
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 87/311 (27%), Positives = 157/311 (50%), Gaps = 8/311 (2%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+I + N + L + ML+ G N FT +LKA + + + G ++H+ LK G
Sbjct: 160 LIAGFSQNNRPRDALLLFPQMLRLGFQPNHFTLSSLLKASGSEHGLDPGTQLHAFCLKYG 219
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+Q +V + L+DMY++C +++ D MP +S VSWN++IS H+R + A+ +
Sbjct: 220 YQSSVYVGSALVDMYARCGHMDAAQLAFDGMPT--KSEVSWNALISGHARKGEGEHALHL 277
Query: 121 LKEMWVLGLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
L +M + + T+ SV+S C + QG +H + K GL + N+++ MYA
Sbjct: 278 LWKMQRKNFQPTHFTYSSVLSACASIGALEQGKWVHAHMIKSGLKLIAF-IGNTLLDMYA 336
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K G +++A+ +FD + + +VSW T++ G G E QM R+ + P+ + FL
Sbjct: 337 KAGSIDDAKRVFDRLVKPDVVSWNTMLTGCAQHGLGKETLDRFEQMLRIGIEPNEISFLC 396
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARR-VFDAVLEK 295
++ C+ G L L L+ K + P V + + G L+ A R + + +E
Sbjct: 397 VLTACSHSGLLDEGLYYFELMKKYKVEPDVPHYVTFVDLLGRVGLLDRAERFIREMPIEP 456
Query: 296 SVFLWTSMIGG 306
+ +W +++G
Sbjct: 457 TAAVWGALLGA 467
>gi|357510067|ref|XP_003625322.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355500337|gb|AES81540.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 1024
Score = 334 bits (856), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 190/604 (31%), Positives = 315/604 (52%), Gaps = 45/604 (7%)
Query: 35 LVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDM--YSKCSDFVSSRKVLDEMP 92
L++++C+ + + K++ + + G AF + +I + D + + +
Sbjct: 162 LIMESCSTMRQL---KQIQARMTLTGIITHAFPVSRVIAFCALAHSGDLHYAHTIFNR-- 216
Query: 93 VRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGC----SFRQG 148
V + WN++I + A A M+ L +E+ + +FV + C + +G
Sbjct: 217 VEQPNTFMWNTMIRGYQNARKPIFAFSFFVYMFQLRVEMDSRSFVFALKACQQFETVFEG 276
Query: 149 ISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVN 208
S++C V+K+G + E+ + N ++ YA+ G + AR +FDE + +V+WTT+I GY
Sbjct: 277 ESVYCVVWKMGF-DCELLVRNGLIHFYAERGLLKNARQVFDESSDKDVVTWTTMIDGYAA 335
Query: 209 VGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPL 268
EA + M V P+ V + ++ C+ +GNL + +H + + L
Sbjct: 336 HDCSEEAMEVFELMLLSHVEPNEVTLIAVVSACSDMGNLEMGKRVHEKVEEKNMRCSLSL 395
Query: 269 DNLLVSMY-------------------------------TKCGDLELARRVFDAVLEKSV 297
N L+ MY KCGDLE ARR FD K+
Sbjct: 396 HNALLDMYVKCDCLVDARELFDRMATKDVYSWTSMVNGYAKCGDLESARRFFDQTPRKNA 455
Query: 298 FLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEY 357
W++MI GY+Q P E++ LF +++ V P E TL + LSAC +L L+ G I +Y
Sbjct: 456 VCWSAMIAGYSQNNKPKESLKLFHEMMERGVVPIEHTLVSVLSACGQLTCLNLGDWIHQY 515
Query: 358 IVLNGL-ESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQ 416
V+ + + ++ +++ M++KCG I+ A EVF +P+++L W+ MI GYA +G Q
Sbjct: 516 FVVGKIIPLSVTLENAIVDMYAKCGSIDAATEVFSTMPERNLISWNTMIAGYAANGRAKQ 575
Query: 417 ALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCL 476
A+N+F +M+++ G +P+ + + S+L+ACSH G++ +G +F +M+ +GI+P HY C+
Sbjct: 576 AINVFDQMRNM-GFEPNNITFVSLLTACSHGGLISEGREYFDNMERKYGIKPERGHYACM 634
Query: 477 VDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGST 536
VDLLGR G + A K I MP++ W LL+AC H NVEL +A NLL L+P +
Sbjct: 635 VDLLGRTGLLEEAYKLIANMPMQPCEAAWGALLNACRMHGNVELARLSAHNLLRLDPEDS 694
Query: 537 GNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSV 596
G Y+L+AN + W + R LM D+ + K PG+S +EIDG F+ D SH S
Sbjct: 695 GIYVLLANTCANDRKWSDVRRVRSLMKDKGVKKIPGYSLIEIDGGFVEFLVADESHPQSE 754
Query: 597 DIRK 600
+I K
Sbjct: 755 EIYK 758
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 115/449 (25%), Positives = 211/449 (46%), Gaps = 39/449 (8%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MIR N S + M Q V +S +F LKAC ++++G+ V+ V K+G
Sbjct: 228 MIRGYQNARKPIFAFSFFVYMFQLRVEMDSRSFVFALKACQQFETVFEGESVYCVVWKMG 287
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F + V+ GLI Y++ ++R+V DE + VV+W ++I ++ ++EA+ V
Sbjct: 288 FDCELLVRNGLIHFYAERGLLKNARQVFDESSD--KDVVTWTTMIDGYAAHDCSEEAMEV 345
Query: 121 LKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGLLNN---EIPLANSVMSMYAK 177
+ M + +E + T ++VVS CS + M V++ N + L N+++ MY K
Sbjct: 346 FELMLLSHVEPNEVTLIAVVSACSDMGNLEMGKRVHEKVEEKNMRCSLSLHNALLDMYVK 405
Query: 178 FGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNV------------------------- 212
+ +AR +FD + + SWT+++ GY G++
Sbjct: 406 CDCLVDARELFDRMATKDVYSWTSMVNGYAKCGDLESARRFFDQTPRKNAVCWSAMIAGY 465
Query: 213 ------NEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNED 266
E+ L ++M V P ++++ C Q+ L L +H +
Sbjct: 466 SQNNKPKESLKLFHEMMERGVVPIEHTLVSVLSACGQLTCLNLGDWIHQYFVVGKIIPLS 525
Query: 267 -PLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLK 325
L+N +V MY KCG ++ A VF + E+++ W +MI GYA G +A+N+F ++
Sbjct: 526 VTLENAIVDMYAKCGSIDAATEVFSTMPERNLISWNTMIAGYAANGRAKQAINVFDQMRN 585
Query: 326 TSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLN-GLESNRQVQTSLIHMFSKCGRIN 384
PN T + L+AC+ G +S+G+E + + G++ R ++ + + G +
Sbjct: 586 MGFEPNNITFVSLLTACSHGGLISEGREYFDNMERKYGIKPERGHYACMVDLLGRTGLLE 645
Query: 385 KAKEVFERVPDKDL-AVWSAMINGYAIHG 412
+A ++ +P + A W A++N +HG
Sbjct: 646 EAYKLIANMPMQPCEAAWGALLNACRMHG 674
>gi|449442687|ref|XP_004139112.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Cucumis sativus]
Length = 681
Score = 333 bits (855), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 206/622 (33%), Positives = 327/622 (52%), Gaps = 59/622 (9%)
Query: 36 VLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRL 95
+L+AC ++ + K +H+ ++ G D F + L+ C+ +S + LD L
Sbjct: 60 LLEACTSMAKM---KEIHAQMISTGLISDGFALSRLVAF---CA--ISEWRNLDYCDKIL 111
Query: 96 RS-----VVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSAS-TFVSVVSGCSFRQGI 149
+ V SWN I + + A+L+ + M G + + T+ + C+ G
Sbjct: 112 NNAANLNVFSWNMAIRGYVESENPINAVLLYRNMLRKGSAIPDNYTYPLLFKVCA---GF 168
Query: 150 SMHCC-------VYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTI 202
S+ V +LG ++++ + N+++ + G++ AR +FDE +VSW +I
Sbjct: 169 SLSWTANEILGHVIQLGF-DSDLFVHNAIIHVLVSCGELLAARKLFDESCVRDLVSWNSI 227
Query: 203 IGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGY 262
I GYV G +EAF L +M ++V PD V + ++ AQ+ NL L +H + + G
Sbjct: 228 INGYVRCGLADEAFDLYYKMGELNVMPDEVTMIGVVSASAQLENLALGRKLHQSIEEMGL 287
Query: 263 NNEDPLDNLLVSMYTKCGDLELAR-------------------------------RVFDA 291
N PL N L+ MY KC ++E A+ R+F+
Sbjct: 288 NLTVPLANALMDMYIKCKNIEAAKILFENMTKKTVVSWTTMVIGYAKFGLLESAVRLFNE 347
Query: 292 VLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKG 351
+ EK V LW ++IGG+ Q EA+ LF + +SV P++ T+ LSAC++LG+L G
Sbjct: 348 MPEKDVVLWNALIGGFVQAKRSKEALALFHEMQASSVAPDKITVVNCLSACSQLGALDVG 407
Query: 352 KEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIH 411
+ Y+ + L N + T+L+ M++KCG I KA +VFE +P ++ W+A+I G A+H
Sbjct: 408 IWMHHYVDKHNLTMNVALGTALVDMYAKCGNIKKAIQVFEEMPGRNSLTWTAIICGLALH 467
Query: 412 GMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIE 471
G A++ F +M + GL PD + + +LSAC H G+VD G +F M S +GI P ++
Sbjct: 468 GQPHAAISYFSEMISI-GLVPDEITFIGVLSACCHGGLVDQGRDYFYQMTSKYGISPKLK 526
Query: 472 HYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTL 531
HY CLVDLLGRAG + A + I MP E A VW L H NV +GE AA LL L
Sbjct: 527 HYSCLVDLLGRAGFLEEAEELIRSMPFEPDAVVWGALFFGSRIHGNVHMGERAASKLLEL 586
Query: 532 NPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRS 591
+P G Y+L+AN++ A MW++A R +M++R + K PG S +E++G V F+ D+S
Sbjct: 587 DPHDGGIYVLLANMYGDANMWEQARKVRKMMEERGVEKTPGCSSIEMNGLVYDFIIRDKS 646
Query: 592 HHLSVDIRKTLKEL--HIKLLE 611
H S I + L L I+++E
Sbjct: 647 HPQSEKIYECLTRLTRQIEVIE 668
Score = 213 bits (541), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 133/453 (29%), Positives = 225/453 (49%), Gaps = 44/453 (9%)
Query: 18 YSSMLQTG-VHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYS 76
Y +ML+ G +++T+PL+ K CA + W + HV+++GF D FV +I +
Sbjct: 142 YRNMLRKGSAIPDNYTYPLLFKVCAGFSLSWTANEILGHVIQLGFDSDLFVHNAIIHVLV 201
Query: 77 KCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTF 136
C + +++RK+ DE V R +VSWNSII+ + R L DEA + +M L + T
Sbjct: 202 SCGELLAARKLFDESCV--RDLVSWNSIINGYVRCGLADEAFDLYYKMGELNVMPDEVTM 259
Query: 137 VSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSM------------------ 174
+ VVS + G +H + ++G LN +PLAN++M M
Sbjct: 260 IGVVSASAQLENLALGRKLHQSIEEMG-LNLTVPLANALMDMYIKCKNIEAAKILFENMT 318
Query: 175 -------------YAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQ 221
YAKFG + A +F+E+ E +V W +IGG+V EA L ++
Sbjct: 319 KKTVVSWTTMVIGYAKFGLLESAVRLFNEMPEKDVVLWNALIGGFVQAKRSKEALALFHE 378
Query: 222 MRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGD 281
M+ SV PD + +N + C+Q+G L + + MH + K L LV MY KCG+
Sbjct: 379 MQASSVAPDKITVVNCLSACSQLGALDVGIWMHHYVDKHNLTMNVALGTALVDMYAKCGN 438
Query: 282 LELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSA 341
++ A +VF+ + ++ WT++I G A G P A++ F ++ + P+E T LSA
Sbjct: 439 IKKAIQVFEEMPGRNSLTWTAIICGLALHGQPHAAISYFSEMISIGLVPDEITFIGVLSA 498
Query: 342 CAELGSLSKGKE-IEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVP-DKDLA 399
C G + +G++ + G+ + + L+ + + G + +A+E+ +P + D
Sbjct: 499 CCHGGLVDQGRDYFYQMTSKYGISPKLKHYSCLVDLLGRAGFLEEAEELIRSMPFEPDAV 558
Query: 400 VWSAMINGYAIHG---MGDQALNLFYKMQHVEG 429
VW A+ G IHG MG++A + ++ +G
Sbjct: 559 VWGALFFGSRIHGNVHMGERAASKLLELDPHDG 591
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 78/333 (23%), Positives = 144/333 (43%), Gaps = 36/333 (10%)
Query: 9 GSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQ 68
G +E Y M + V + T V+ A A + ++ G+++H + ++G +
Sbjct: 235 GLADEAFDLYYKMGELNVMPDEVTMIGVVSASAQLENLALGRKLHQSIEEMGLNLTVPLA 294
Query: 69 TGLIDMYSKCSDFVSSRKVLDEM-----------------------PVRL------RSVV 99
L+DMY KC + +++ + + M VRL + VV
Sbjct: 295 NALMDMYIKCKNIEAAKILFENMTKKTVVSWTTMVIGYAKFGLLESAVRLFNEMPEKDVV 354
Query: 100 SWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCV 155
WN++I +A + EA+ + EM + T V+ +S CS GI MH V
Sbjct: 355 LWNALIGGFVQAKRSKEALALFHEMQASSVAPDKITVVNCLSACSQLGALDVGIWMHHYV 414
Query: 156 YKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEA 215
K L N + L +++ MYAK G + +A +F+E+ + ++WT II G G + A
Sbjct: 415 DKHNLTMN-VALGTALVDMYAKCGNIKKAIQVFEEMPGRNSLTWTAIICGLALHGQPHAA 473
Query: 216 FGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALS-MHSLLLKSGYNNEDPLDNLLVS 274
++M + + PD + F+ ++ C G + + + K G + + + LV
Sbjct: 474 ISYFSEMISIGLVPDEITFIGVLSACCHGGLVDQGRDYFYQMTSKYGISPKLKHYSCLVD 533
Query: 275 MYTKCGDLELARRVFDAV-LEKSVFLWTSMIGG 306
+ + G LE A + ++ E +W ++ G
Sbjct: 534 LLGRAGFLEEAEELIRSMPFEPDAVVWGALFFG 566
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 75/290 (25%), Positives = 118/290 (40%), Gaps = 41/290 (14%)
Query: 12 EETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGL 71
+E L+ + M + V + T L AC+ + ++ G +H +V K + + T L
Sbjct: 370 KEALALFHEMQASSVAPDKITVVNCLSACSQLGALDVGIWMHHYVDKHNLTMNVALGTAL 429
Query: 72 IDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLEL 131
+DMY+KC + + +V +EMP R+ ++W +II + AI EM +GL
Sbjct: 430 VDMYAKCGNIKKAIQVFEEMPG--RNSLTWTAIICGLALHGQPHAAISYFSEMISIGLVP 487
Query: 132 SASTFVSVVSGCSFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEI 191
TF+ V+S C GL++ + S Y K+ + D +
Sbjct: 488 DEITFIGVLSACCHG------------GLVDQGRDYFYQMTSKYGISPKLKHYSCLVDLL 535
Query: 192 GETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLAL 251
G G + EA L +R M PD VV+ L G GN+ +
Sbjct: 536 GRA---------------GFLEEAEEL---IRSMPFEPDAVVWGALFFGSRIHGNVHMGE 577
Query: 252 SMHSLLLKSGYNNEDPLDN----LLVSMYTKCGDLELARRVFDAVLEKSV 297
S LL+ DP D LL +MY E AR+V + E+ V
Sbjct: 578 RAASKLLEL-----DPHDGGIYVLLANMYGDANMWEQARKVRKMMEERGV 622
>gi|18394615|ref|NP_564054.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806507|sp|Q0WN60.2|PPR48_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g18485
gi|332191599|gb|AEE29720.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 970
Score = 333 bits (855), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 195/625 (31%), Positives = 342/625 (54%), Gaps = 15/625 (2%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHG----NSFTFPLVLKACANINSIWDGKRVHSHV 56
MIR ++NG EE+ M++ G + T VL CA I GK VH
Sbjct: 259 MIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWA 318
Query: 57 LKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDE 116
+K+ ++ + L+DMYSKC +++ +++ +M ++VVSWN+++ S
Sbjct: 319 VKLRLDKELVLNNALMDMYSKCG-CITNAQMIFKMNNN-KNVVSWNTMVGGFSAEGDTHG 376
Query: 117 AILVLKEMWVLGLELSAS--TFVSVVSGC---SFRQGIS-MHCCVYKLGLLNNEIPLANS 170
VL++M G ++ A T ++ V C SF + +HC K + NE+ +AN+
Sbjct: 377 TFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNEL-VANA 435
Query: 171 VMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPD 230
++ YAK G ++ A+ +F I ++ SW +IGG+ + + QM+ + PD
Sbjct: 436 FVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPD 495
Query: 231 LVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFD 290
+L+ C+++ +L L +H ++++ + + ++S+Y CG+L + +FD
Sbjct: 496 SFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFD 555
Query: 291 AVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSK 350
A+ +KS+ W ++I GY Q G+P A+ +F++++ ++ ++ AC+ L SL
Sbjct: 556 AMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRL 615
Query: 351 GKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAI 410
G+E Y + + LE + + SLI M++K G I ++ +VF + +K A W+AMI GY I
Sbjct: 616 GREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGI 675
Query: 411 HGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSI 470
HG+ +A+ LF +MQ G PD + + +L+AC+HSG++ +GL + M+S+FG++P++
Sbjct: 676 HGLAKEAIKLFEEMQRT-GHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNL 734
Query: 471 EHYLCLVDLLGRAGRFDLALKTI-HEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLL 529
+HY C++D+LGRAG+ D AL+ + EM E +W LLS+C H N+E+GE A L
Sbjct: 735 KHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGEKVAAKLF 794
Query: 530 TLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGD 589
L P NY+L++NL+ G W++ R M++ L K+ G S +E++ V FV G+
Sbjct: 795 ELEPEKPENYVLLSNLYAGLGKWEDVRKVRQRMNEMSLRKDAGCSWIELNRKVFSFVVGE 854
Query: 590 RSHHLSVDIRKTLKELHIKLLEAGY 614
R +I+ L +K+ + GY
Sbjct: 855 RFLDGFEEIKSLWSILEMKISKMGY 879
Score = 215 bits (547), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 138/455 (30%), Positives = 236/455 (51%), Gaps = 13/455 (2%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQT-GVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKV 59
+I + + N ++E L T+ M+ T + + FT+P V+KACA ++ + G VH V+K
Sbjct: 157 VISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKT 216
Query: 60 GFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAIL 119
G +D FV L+ Y + ++ D MP R ++VSWNS+I S ++E+ L
Sbjct: 217 GLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPER--NLVSWNSMIRVFSDNGFSEESFL 274
Query: 120 VLKEMWVL----GLELSASTFVSVVSGCSFRQGISMHCCVYKLGL---LNNEIPLANSVM 172
+L EM +T V+V+ C+ + I + V+ + L+ E+ L N++M
Sbjct: 275 LLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALM 334
Query: 173 SMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRR--MSVTPD 230
MY+K G + A+ IF ++VSW T++GG+ G+ + F + QM V D
Sbjct: 335 DMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKAD 394
Query: 231 LVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFD 290
V LN + C L +H LK + + + N V+ Y KCG L A+RVF
Sbjct: 395 EVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFH 454
Query: 291 AVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSK 350
+ K+V W ++IGG+AQ P +++ ++ + + P+ T+ + LSAC++L SL
Sbjct: 455 GIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRL 514
Query: 351 GKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAI 410
GKE+ +I+ N LE + V S++ ++ CG + + +F+ + DK L W+ +I GY
Sbjct: 515 GKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQ 574
Query: 411 HGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACS 445
+G D+AL +F +M + G++ + + ACS
Sbjct: 575 NGFPDRALGVFRQMV-LYGIQLCGISMMPVFGACS 608
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 117/423 (27%), Positives = 210/423 (49%), Gaps = 16/423 (3%)
Query: 35 LVLKACANINSIWDGKRVHSHVL-KVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPV 93
L+L+A I G+++H V + D + T +I MY+ C SR V D +
Sbjct: 89 LLLQASGKRKDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDAL-- 146
Query: 94 RLRSVVSWNSIISAHSRACLNDEAILVLKEMW-VLGLELSASTFVSVVSGCSFRQ----G 148
R +++ WN++IS++SR L DE + EM L T+ V+ C+ G
Sbjct: 147 RSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIG 206
Query: 149 ISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVN 208
+++H V K GL+ ++ + N+++S Y G V +A +FD + E ++VSW ++I + +
Sbjct: 207 LAVHGLVVKTGLV-EDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSD 265
Query: 209 VGNVNEAFGLCNQMRRM----SVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNN 264
G E+F L +M + PD+ + ++ CA+ + L +H +K +
Sbjct: 266 NGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDK 325
Query: 265 EDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLL 324
E L+N L+ MY+KCG + A+ +F K+V W +M+GG++ G ++ +++L
Sbjct: 326 ELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQML 385
Query: 325 K--TSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGR 382
V+ +E T+ + C L KE+ Y + N V + + ++KCG
Sbjct: 386 AGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGS 445
Query: 383 INKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILS 442
++ A+ VF + K + W+A+I G+A +L+ +M+ + GL PD+ S+LS
Sbjct: 446 LSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMK-ISGLLPDSFTVCSLLS 504
Query: 443 ACS 445
ACS
Sbjct: 505 ACS 507
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 87/341 (25%), Positives = 162/341 (47%), Gaps = 13/341 (3%)
Query: 116 EAILVLKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGLLNNEIPLANSVMSMY 175
+A L+++E LGL L AS + G +H V L N+ L +++MY
Sbjct: 78 DAFLLVRE--ALGLLLQASGKRKDIE-----MGRKIHQLVSGSTRLRNDDVLCTRIITMY 130
Query: 176 AKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQM-RRMSVTPDLVVF 234
A G +++R +FD + ++ W +I Y +E +M + PD +
Sbjct: 131 AMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTY 190
Query: 235 LNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLE 294
+I CA + ++ + L++H L++K+G + + N LVS Y G + A ++FD + E
Sbjct: 191 PCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPE 250
Query: 295 KSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKT----SVRPNEATLATTLSACAELGSLSK 350
+++ W SMI ++ G+ E+ L +++ + P+ ATL T L CA +
Sbjct: 251 RNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGL 310
Query: 351 GKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAI 410
GK + + V L+ + +L+ M+SKCG I A+ +F+ +K++ W+ M+ G++
Sbjct: 311 GKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSA 370
Query: 411 HGMGDQALNLFYKM-QHVEGLKPDAVVYTSILSACSHSGMV 450
G ++ +M E +K D V + + C H +
Sbjct: 371 EGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFL 411
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 63/122 (51%), Gaps = 3/122 (2%)
Query: 334 TLATTLSACAELGSLSKGKEIEEYIV-LNGLESNRQVQTSLIHMFSKCGRINKAKEVFER 392
L L A + + G++I + + L ++ + T +I M++ CG + ++ VF+
Sbjct: 86 ALGLLLQASGKRKDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDA 145
Query: 393 VPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDD 452
+ K+L W+A+I+ Y+ + + D+ L F +M L PD Y ++ AC +GM D
Sbjct: 146 LRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKAC--AGMSDV 203
Query: 453 GL 454
G+
Sbjct: 204 GI 205
>gi|449440243|ref|XP_004137894.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Cucumis sativus]
Length = 688
Score = 333 bits (855), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 193/581 (33%), Positives = 321/581 (55%), Gaps = 18/581 (3%)
Query: 50 KRVHSHVLKVGFQQDAFVQTGLIDMYSKCS-DFVS---SRKVLDEMPVRLRSVVSWNSII 105
K +H+ +L++ QD + L+++ C+ DF S S+ V + V+ ++ WN++I
Sbjct: 33 KHIHARLLRLHLDQDNY----LLNLILCCALDFGSTNYSKLVFSQ--VKEPNIFLWNTMI 86
Query: 106 SAH-SRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGL 160
S+ C D+AI + M G + T V+ C+ R G+ +H + K G
Sbjct: 87 RGLVSKDCF-DDAIHLYGSMRGGGFLPNNFTIPFVLKACARKLDVRLGLKIHSLLVKAGY 145
Query: 161 LNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCN 220
++++ + S++S+Y K ++A +FD+I + ++VSWT II GY++ G+ EA G
Sbjct: 146 -DHDVFVKTSLLSLYVKCDNFDDALKVFDDIPDKNVVSWTAIITGYISSGHFREAIGAFK 204
Query: 221 QMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCG 280
++ M + PD + ++ CA++G+ + + SG + L+ MY KCG
Sbjct: 205 KLLEMGLKPDSFSLVKVLAACARLGDCTSGEWIDRYISDSGMGRNVFVATSLLDMYVKCG 264
Query: 281 DLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLS 340
+LE A +F A+ EK + W++MI GYA G P +A++LF ++ +++P+ T+ LS
Sbjct: 265 NLERANLIFSAMPEKDIVSWSTMIQGYAFNGLPQQALDLFFQMQSENLKPDCYTMVGVLS 324
Query: 341 ACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAV 400
ACA LG+L G + N SN + T+LI M+SKCG + +A E+F + KD V
Sbjct: 325 ACATLGALDLGIWASSLMDRNEFLSNPVLGTALIDMYSKCGSVTQAWEIFTAMKRKDRVV 384
Query: 401 WSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSM 460
W+AM+ G +++G +LF ++ G++PD + +L C+H G V++G FF +M
Sbjct: 385 WNAMMVGLSMNGHAKAVFSLFSLVEK-HGIRPDENTFIGLLCGCTHGGFVNEGRQFFNNM 443
Query: 461 QSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVEL 520
+ F + PSIEHY C+VDLLGRAG + A + I+ MP++ A VW LL C H + L
Sbjct: 444 KRVFSLTPSIEHYGCMVDLLGRAGLLNEAHQLINNMPMKPNAVVWGALLGGCKLHKDTHL 503
Query: 521 GEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDG 580
E K L+ L P ++GNY+ ++N+++ W+EA R M ++++ K S +EIDG
Sbjct: 504 AEQVLKKLIELEPWNSGNYVQLSNIYSGNHRWEEAEKIRSTMKEQQIQKIRACSWIEIDG 563
Query: 581 SVQVFVAGDRSHHLSVDIRKTLKELHIKLLEAGYIAEADIV 621
V F+ GD+SH LS I L EL +L G++ + V
Sbjct: 564 IVHEFLVGDKSHWLSEKIYAKLDELGRELKAVGHVPTTEFV 604
Score = 208 bits (530), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 111/310 (35%), Positives = 182/310 (58%), Gaps = 2/310 (0%)
Query: 145 FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIG 204
F Q +H + +L L + + L N ++ FG N ++ +F ++ E +I W T+I
Sbjct: 29 FNQLKHIHARLLRLHL-DQDNYLLNLILCCALDFGSTNYSKLVFSQVKEPNIFLWNTMIR 87
Query: 205 GYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNN 264
G V+ ++A L MR P+ ++ CA+ ++ L L +HSLL+K+GY++
Sbjct: 88 GLVSKDCFDDAIHLYGSMRGGGFLPNNFTIPFVLKACARKLDVRLGLKIHSLLVKAGYDH 147
Query: 265 EDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLL 324
+ + L+S+Y KC + + A +VFD + +K+V WT++I GY G+ EA+ FK+LL
Sbjct: 148 DVFVKTSLLSLYVKCDNFDDALKVFDDIPDKNVVSWTAIITGYISSGHFREAIGAFKKLL 207
Query: 325 KTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRIN 384
+ ++P+ +L L+ACA LG + G+ I+ YI +G+ N V TSL+ M+ KCG +
Sbjct: 208 EMGLKPDSFSLVKVLAACARLGDCTSGEWIDRYISDSGMGRNVFVATSLLDMYVKCGNLE 267
Query: 385 KAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSAC 444
+A +F +P+KD+ WS MI GYA +G+ QAL+LF++MQ E LKPD +LSAC
Sbjct: 268 RANLIFSAMPEKDIVSWSTMIQGYAFNGLPQQALDLFFQMQS-ENLKPDCYTMVGVLSAC 326
Query: 445 SHSGMVDDGL 454
+ G +D G+
Sbjct: 327 ATLGALDLGI 336
Score = 201 bits (512), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 128/439 (29%), Positives = 223/439 (50%), Gaps = 19/439 (4%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MIR + F++ + Y SM G N+FT P VLKACA + G ++HS ++K G
Sbjct: 85 MIRGLVSKDCFDDAIHLYGSMRGGGFLPNNFTIPFVLKACARKLDVRLGLKIHSLLVKAG 144
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+ D FV+T L+ +Y KC +F + KV D++P ++VVSW +II+ + + EAI
Sbjct: 145 YDHDVFVKTSLLSLYVKCDNFDDALKVFDDIPD--KNVVSWTAIITGYISSGHFREAIGA 202
Query: 121 LKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
K++ +GL+ + + V V++ C+ G + + G+ N + +A S++ MY
Sbjct: 203 FKKLLEMGLKPDSFSLVKVLAACARLGDCTSGEWIDRYISDSGMGRN-VFVATSLLDMYV 261
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K G + A IF + E IVSW+T+I GY G +A L QM+ ++ PD +
Sbjct: 262 KCGNLERANLIFSAMPEKDIVSWSTMIQGYAFNGLPQQALDLFFQMQSENLKPDCYTMVG 321
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
++ CA +G L L + SL+ ++ + + L L+ MY+KCG + A +F A+ K
Sbjct: 322 VLSACATLGALDLGIWASSLMDRNEFLSNPVLGTALIDMYSKCGSVTQAWEIFTAMKRKD 381
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEE 356
+W +M+ G + G+ +LF + K +RP+E T L C G +++G++
Sbjct: 382 RVVWNAMMVGLSMNGHAKAVFSLFSLVEKHGIRPDENTFIGLLCGCTHGGFVNEGRQF-- 439
Query: 357 YIVLNGLESNRQVQTSLIH------MFSKCGRINKAKEVFERVPDK-DLAVWSAMINGYA 409
N ++ + S+ H + + G +N+A ++ +P K + VW A++ G
Sbjct: 440 ---FNNMKRVFSLTPSIEHYGCMVDLLGRAGLLNEAHQLINNMPMKPNAVVWGALLGGCK 496
Query: 410 IHGMGDQALNLFYKMQHVE 428
+H A + K+ +E
Sbjct: 497 LHKDTHLAEQVLKKLIELE 515
>gi|125525985|gb|EAY74099.1| hypothetical protein OsI_01984 [Oryza sativa Indica Group]
Length = 735
Score = 333 bits (855), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 182/556 (32%), Positives = 311/556 (55%), Gaps = 9/556 (1%)
Query: 64 DAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAI----L 119
+ +V T L++MY K +R++ D MP R + SW+++++ ++ ++EA L
Sbjct: 152 NVYVCTSLLNMYCKLGIVSDARRMFDGMPQR--NSFSWSTMVAGYAAEKCSEEAFDLFRL 209
Query: 120 VLKEMWVLGLELSASTFVSVVS-GCSFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKF 178
+L+E E A+ +S VS G MH + K GLL+ + + NS+++MYAK
Sbjct: 210 MLEECPSEKSEFVATAVLSAVSVPLGLLMGEQMHGLIVKDGLLDF-VSVENSLVTMYAKA 268
Query: 179 GKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLI 238
G + A +F+ E + ++W+ +I GY G + A + +QM TP F+ ++
Sbjct: 269 GCMGAAFHVFESSRERNSITWSAMITGYAQNGEADSAVSMFSQMHAAGFTPTEFTFVGVL 328
Query: 239 LGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVF 298
+ +G L + H L++K G+ + + + LV MY KCG + A+ FD + E +
Sbjct: 329 NASSDLGALAVGKQAHGLMVKLGFEVQIYVKSALVDMYAKCGCIADAKEGFDQLYEVDIV 388
Query: 299 LWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYI 358
LWT+M+ G+ Q G EA+ L+ R+ K + P+++T+A+ L ACA + +L GK++ I
Sbjct: 389 LWTAMVSGHVQNGEHEEALTLYARMDKEGIIPSKSTIASGLRACAGIAALEPGKQLHTQI 448
Query: 359 VLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQAL 418
V GL V ++L M+SKCG + VF R+PD+D+ W+++I+G++ +G G+ AL
Sbjct: 449 VKYGLGLGAPVGSALSTMYSKCGNLEDGMSVFRRIPDRDVIAWNSIISGFSQNGCGNGAL 508
Query: 419 NLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVD 478
+LF +M+ +EG PD + + +IL ACSH G+VD G +F M ++G+ P ++HY C+VD
Sbjct: 509 DLFEEMK-MEGTIPDNITFINILCACSHMGLVDRGWEYFSLMTKDYGLTPRLDHYACMVD 567
Query: 479 LLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGN 538
+L RAG A I + ++ +W +L AC + ++G YA + L+ L +
Sbjct: 568 ILSRAGMLKEAKDFIESITIDHGTCLWRIVLGACRSLRDFDVGAYAGERLMELGTRDSSA 627
Query: 539 YILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDI 598
YIL++N++ S W + R LM R + K+PG S VE++ V VFV G++ H + +I
Sbjct: 628 YILLSNIYASQRKWNDVERVRHLMRLRGVNKDPGCSWVELNSRVHVFVVGEQQHPEAENI 687
Query: 599 RKTLKELHIKLLEAGY 614
L+ L + + GY
Sbjct: 688 NAQLRRLAKHMKDEGY 703
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 157/565 (27%), Positives = 261/565 (46%), Gaps = 75/565 (13%)
Query: 49 GKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSD--FVSSRKVLDEMPVRLRSVVSWNSIIS 106
G+ +H+ LK G A V LI+ YS ++ V D++P R V SWNS+++
Sbjct: 31 GEALHAWALKSGAASHAPVANSLINFYSSLPRPLLAAAFAVFDDIPPAARDVASWNSLLN 90
Query: 107 AHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCSF-------------RQGISMHC 153
SR D A+ + M LS+ST + S SF G + H
Sbjct: 91 PLSRHRPLD-ALSRFRSM------LSSSTVLP--SPHSFAAAFTAAARAASAPAGTAAHA 141
Query: 154 CVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVN 213
K+ + + + S+++MY K G V++AR +FD + + + SW+T++ GY
Sbjct: 142 LACKIPSAVSNVYVCTSLLNMYCKLGIVSDARRMFDGMPQRNSFSWSTMVAGYAAEKCSE 201
Query: 214 EAFGLCNQMRRMSVTPDLVVFLNLILGCAQVG-NLFLALSMHSLLLKSGYNNEDPLDNLL 272
EAF L M + +L V L + MH L++K G + ++N L
Sbjct: 202 EAFDLFRLMLEECPSEKSEFVATAVLSAVSVPLGLLMGEQMHGLIVKDGLLDFVSVENSL 261
Query: 273 VSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNE 332
V+MY K G + A VF++ E++ W++MI GYAQ G AV++F ++ P E
Sbjct: 262 VTMYAKAGCMGAAFHVFESSRERNSITWSAMITGYAQNGEADSAVSMFSQMHAAGFTPTE 321
Query: 333 ATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFER 392
T L+A ++LG+L+ GK+ +V G E V+++L+ M++KCG I AKE F++
Sbjct: 322 FTFVGVLNASSDLGALAVGKQAHGLMVKLGFEVQIYVKSALVDMYAKCGCIADAKEGFDQ 381
Query: 393 VPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSAC-------- 444
+ + D+ +W+AM++G+ +G ++AL L+ +M EG+ P S L AC
Sbjct: 382 LYEVDIVLWTAMVSGHVQNGEHEEALTLYARMDK-EGIIPSKSTIASGLRACAGIAALEP 440
Query: 445 ---------------------------SHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLV 477
S G ++DG+S F+ + + + + ++
Sbjct: 441 GKQLHTQIVKYGLGLGAPVGSALSTMYSKCGNLEDGMSVFRRIP-----DRDVIAWNSII 495
Query: 478 DLLGRAGRFDLALKTIHEMPVEVQAQ---VWAPLLSACMKHHNVELG-EYAAKNLLTLNP 533
+ G + AL EM +E + +L AC V+ G EY + L+T +
Sbjct: 496 SGFSQNGCGNGALDLFEEMKMEGTIPDNITFINILCACSHMGLVDRGWEYFS--LMTKDY 553
Query: 534 GST---GNYILMANLFTSAGMWKEA 555
G T +Y M ++ + AGM KEA
Sbjct: 554 GLTPRLDHYACMVDILSRAGMLKEA 578
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 87/342 (25%), Positives = 168/342 (49%), Gaps = 11/342 (3%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI NG + +S +S M G FTF VL A +++ ++ GK+ H ++K+G
Sbjct: 292 MITGYAQNGEADSAVSMFSQMHAAGFTPTEFTFVGVLNASSDLGALAVGKQAHGLMVKLG 351
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F+ +V++ L+DMY+KC +++ D++ +V W +++S H + ++EA+ +
Sbjct: 352 FEVQIYVKSALVDMYAKCGCIADAKEGFDQL--YEVDIVLWTAMVSGHVQNGEHEEALTL 409
Query: 121 LKEMWVLGLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
M G+ S ST S + C + G +H + K G L P+ +++ +MY+
Sbjct: 410 YARMDKEGIIPSKSTIASGLRACAGIAALEPGKQLHTQIVKYG-LGLGAPVGSALSTMYS 468
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K G + + S+F I + +++W +II G+ G N A L +M+ PD + F+N
Sbjct: 469 KCGNLEDGMSVFRRIPDRDVIAWNSIISGFSQNGCGNGALDLFEEMKMEGTIPDNITFIN 528
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNL--LVSMYTKCGDLELARRVFDAV-L 293
++ C+ +G + SL+ K Y LD+ +V + ++ G L+ A+ +++ +
Sbjct: 529 ILCACSHMGLVDRGWEYFSLMTKD-YGLTPRLDHYACMVDILSRAGMLKEAKDFIESITI 587
Query: 294 EKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATL 335
+ LW ++G L +RL++ R + A +
Sbjct: 588 DHGTCLWRIVLGACRSLRDFDVGAYAGERLMELGTRDSSAYI 629
>gi|110739044|dbj|BAF01440.1| hypothetical protein [Arabidopsis thaliana]
Length = 720
Score = 333 bits (855), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 195/625 (31%), Positives = 342/625 (54%), Gaps = 15/625 (2%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHG----NSFTFPLVLKACANINSIWDGKRVHSHV 56
MIR ++NG EE+ M++ G + T VL CA I GK VH
Sbjct: 9 MIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWA 68
Query: 57 LKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDE 116
+K+ ++ + L+DMYSKC +++ +++ +M ++VVSWN+++ S
Sbjct: 69 VKLRLDKELVLNNALMDMYSKCG-CITNAQMIFKMNNN-KNVVSWNTMVGGFSAEGDTHG 126
Query: 117 AILVLKEMWVLGLELSAS--TFVSVVSGC---SFRQGIS-MHCCVYKLGLLNNEIPLANS 170
VL++M G ++ A T ++ V C SF + +HC K + NE+ +AN+
Sbjct: 127 TFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNEL-VANA 185
Query: 171 VMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPD 230
++ YAK G ++ A+ +F I ++ SW +IGG+ + + QM+ + PD
Sbjct: 186 FVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPD 245
Query: 231 LVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFD 290
+L+ C+++ +L L +H ++++ + + ++S+Y CG+L + +FD
Sbjct: 246 SFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFD 305
Query: 291 AVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSK 350
A+ +KS+ W ++I GY Q G+P A+ +F++++ ++ ++ AC+ L SL
Sbjct: 306 AMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRL 365
Query: 351 GKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAI 410
G+E Y + + LE + + SLI M++K G I ++ +VF + +K A W+AMI GY I
Sbjct: 366 GREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGI 425
Query: 411 HGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSI 470
HG+ +A+ LF +MQ G PD + + +L+AC+HSG++ +GL + M+S+FG++P++
Sbjct: 426 HGLAKEAIKLFEEMQRT-GHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNL 484
Query: 471 EHYLCLVDLLGRAGRFDLALKTI-HEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLL 529
+HY C++D+LGRAG+ D AL+ + EM E +W LLS+C H N+E+GE A L
Sbjct: 485 KHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGEKVAAKLF 544
Query: 530 TLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGD 589
L P NY+L++NL+ G W++ R M++ L K+ G S +E++ V FV G+
Sbjct: 545 ELEPEKPENYVLLSNLYAGLGKWEDVRKVRQRMNEMSLRKDAGCSWIELNRKVFSFVVGE 604
Query: 590 RSHHLSVDIRKTLKELHIKLLEAGY 614
R +I+ L +K+ + GY
Sbjct: 605 RFLDGFEEIKSLWSILEMKISKMGY 629
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 109/359 (30%), Positives = 186/359 (51%), Gaps = 10/359 (2%)
Query: 96 RSVVSWNSIISAHSRACLNDEAILVLKEMWVL----GLELSASTFVSVVSGCSFRQGISM 151
R+ VSWNS+I S ++E+ L+L EM +T V+V+ C+ + I +
Sbjct: 1 RNFVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGL 60
Query: 152 HCCVYKLGL---LNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVN 208
V+ + L+ E+ L N++M MY+K G + A+ IF ++VSW T++GG+
Sbjct: 61 GKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSA 120
Query: 209 VGNVNEAFGLCNQMRR--MSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNED 266
G+ + F + QM V D V LN + C L +H LK + +
Sbjct: 121 EGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNE 180
Query: 267 PLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKT 326
+ N V+ Y KCG L A+RVF + K+V W ++IGG+AQ P +++ ++ +
Sbjct: 181 LVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKIS 240
Query: 327 SVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKA 386
+ P+ T+ + LSAC++L SL GKE+ +I+ N LE + V S++ ++ CG +
Sbjct: 241 GLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTV 300
Query: 387 KEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACS 445
+ +F+ + DK L W+ +I GY +G D+AL +F +M + G++ + + ACS
Sbjct: 301 QALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMV-LYGIQLCGISMMPVFGACS 358
>gi|147766033|emb|CAN70212.1| hypothetical protein VITISV_038740 [Vitis vinifera]
Length = 724
Score = 333 bits (855), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 165/475 (34%), Positives = 279/475 (58%), Gaps = 2/475 (0%)
Query: 147 QGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGY 206
QG +H + L+N + L N +++MYAK G +++AR +FDE+ +V+WT +I G+
Sbjct: 105 QGRIVHAHLVDSHFLDNHLVLQNIIVNMYAKCGCLDDARRMFDEMPTKDMVTWTALIAGF 164
Query: 207 VNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNED 266
+A L QM R+ + P+ +L+ L +H+ LK GY +
Sbjct: 165 SQNNRPRDALLLFPQMLRLGLQPNHFTLSSLLKASGSEHGLDPGTQLHAFCLKYGYQSSV 224
Query: 267 PLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKT 326
+ + LV MY +CG ++ A+ FD + KS W ++I G+A+ G A++L ++ +
Sbjct: 225 YVGSALVDMYARCGHMDAAQLAFDGMPTKSEVSWNALISGHARKGEGEHALHLLWKMQRK 284
Query: 327 SVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKA 386
+ +P T ++ SACA +G+L +GK + +++ +GL+ + +L+ M++K G I+ A
Sbjct: 285 NFQPTHFTYSSVFSACASIGALEQGKWVHAHMIKSGLKLIAFIGNTLLDMYAKAGSIDDA 344
Query: 387 KEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSH 446
K VF+R+ D+ W+ M+ G A HG+G + L+ F +M + G++P+ + + +L+ACSH
Sbjct: 345 KRVFDRLVKPDVVSWNTMLTGCAQHGLGKETLDRFEQMLRI-GIEPNEISFLCVLTACSH 403
Query: 447 SGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWA 506
SG++D+GL +F+ M+ + +EP + HY+ VDLLGR G D A + I EMP+E A VW
Sbjct: 404 SGLLDEGLYYFELMK-KYKVEPDVPHYVTFVDLLGRVGLLDRAERFIREMPIEPTAAVWG 462
Query: 507 PLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRR 566
LL AC H N+ELG YAA+ L+P +G +L++N++ SAG W++ A R +M +
Sbjct: 463 ALLGACRMHKNMELGVYAAERAFELDPHDSGPRMLLSNIYASAGRWRDVAKVRKMMKESG 522
Query: 567 LTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKELHIKLLEAGYIAEADIV 621
+ K+P S VEI+ +V +FVA D +H +IR +E+ K+ E GY+ + V
Sbjct: 523 VKKQPACSWVEIENAVHLFVANDETHPQIKEIRGKWEEISGKIKEIGYVPDTSHV 577
Score = 177 bits (449), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 102/382 (26%), Positives = 196/382 (51%), Gaps = 9/382 (2%)
Query: 36 VLKACANINSIWDGKRVHSHVLKVGFQQDAFV-QTGLIDMYSKCSDFVSSRKVLDEMPVR 94
+LK C + + G+ VH+H++ F + V Q +++MY+KC +R++ DEMP
Sbjct: 93 LLKECTRLGKVEQGRIVHAHLVDSHFLDNHLVLQNIIVNMYAKCGCLDDARRMFDEMPT- 151
Query: 95 LRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCSFRQGI----S 150
+ +V+W ++I+ S+ +A+L+ +M LGL+ + T S++ G+
Sbjct: 152 -KDMVTWTALIAGFSQNNRPRDALLLFPQMLRLGLQPNHFTLSSLLKASGSEHGLDPGTQ 210
Query: 151 MHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVG 210
+H K G + + + ++++ MYA+ G ++ A+ FD + S VSW +I G+ G
Sbjct: 211 LHAFCLKYG-YQSSVYVGSALVDMYARCGHMDAAQLAFDGMPTKSEVSWNALISGHARKG 269
Query: 211 NVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDN 270
A L +M+R + P + ++ CA +G L +H+ ++KSG + N
Sbjct: 270 EGEHALHLLWKMQRKNFQPTHFTYSSVFSACASIGALEQGKWVHAHMIKSGLKLIAFIGN 329
Query: 271 LLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRP 330
L+ MY K G ++ A+RVFD +++ V W +M+ G AQ G E ++ F+++L+ + P
Sbjct: 330 TLLDMYAKAGSIDDAKRVFDRLVKPDVVSWNTMLTGCAQHGLGKETLDRFEQMLRIGIEP 389
Query: 331 NEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVF 390
NE + L+AC+ G L +G E + +E + + + + + G +++A+
Sbjct: 390 NEISFLCVLTACSHSGLLDEGLYYFELMKKYKVEPDVPHYVTFVDLLGRVGLLDRAERFI 449
Query: 391 ERVP-DKDLAVWSAMINGYAIH 411
+P + AVW A++ +H
Sbjct: 450 REMPIEPTAAVWGALLGACRMH 471
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 87/311 (27%), Positives = 157/311 (50%), Gaps = 8/311 (2%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+I + N + L + ML+ G+ N FT +LKA + + + G ++H+ LK G
Sbjct: 160 LIAGFSQNNRPRDALLLFPQMLRLGLQPNHFTLSSLLKASGSEHGLDPGTQLHAFCLKYG 219
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+Q +V + L+DMY++C +++ D MP +S VSWN++IS H+R + A+ +
Sbjct: 220 YQSSVYVGSALVDMYARCGHMDAAQLAFDGMPT--KSEVSWNALISGHARKGEGEHALHL 277
Query: 121 LKEMWVLGLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
L +M + + T+ SV S C + QG +H + K GL + N+++ MYA
Sbjct: 278 LWKMQRKNFQPTHFTYSSVFSACASIGALEQGKWVHAHMIKSGLKLIAF-IGNTLLDMYA 336
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K G +++A+ +FD + + +VSW T++ G G E QM R+ + P+ + FL
Sbjct: 337 KAGSIDDAKRVFDRLVKPDVVSWNTMLTGCAQHGLGKETLDRFEQMLRIGIEPNEISFLC 396
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARR-VFDAVLEK 295
++ C+ G L L L+ K + P V + + G L+ A R + + +E
Sbjct: 397 VLTACSHSGLLDEGLYYFELMKKYKVEPDVPHYVTFVDLLGRVGLLDRAERFIREMPIEP 456
Query: 296 SVFLWTSMIGG 306
+ +W +++G
Sbjct: 457 TAAVWGALLGA 467
>gi|224082698|ref|XP_002306801.1| predicted protein [Populus trichocarpa]
gi|222856250|gb|EEE93797.1| predicted protein [Populus trichocarpa]
Length = 787
Score = 333 bits (855), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 198/619 (31%), Positives = 330/619 (53%), Gaps = 10/619 (1%)
Query: 8 NGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFV 67
NG E L + M + GV N++T L+AC + + G +H+ +LK D +V
Sbjct: 90 NGQCMEALGLFREMQKAGVGANTYTLVAALQACEDSSFKKLGMEIHAAILKSNQVLDVYV 149
Query: 68 QTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVL 127
L+ M+ + + ++ DE+ + ++WNS+I+ ++ L +EA+ +
Sbjct: 150 ANALVAMHVRFGKMSYAARIFDELDEK--DNITWNSMIAGFTQNGLYNEALQFFCGLQDA 207
Query: 128 GLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNE 183
L+ + +S+++ G +H K L++ + + N+++ MY+K V
Sbjct: 208 NLKPDEVSLISILAASGRLGYLLNGKEIHAYAMK-NWLDSNLRIGNTLIDMYSKCCCVAY 266
Query: 184 ARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQ 243
A +FD++ ++SWTT+I Y EA L +++ + D ++ + +L C+
Sbjct: 267 AGLVFDKMINKDLISWTTVIAAYAQNNCHTEALKLLRKVQTKGMDVDTMMIGSTLLACSG 326
Query: 244 VGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSM 303
+ L A +H LK G ++ + N+++ +Y CG++ A R+F+++ K V WTSM
Sbjct: 327 LRCLSHAKEVHGYTLKRGLSDL-MMQNMIIDVYADCGNINYATRMFESIKCKDVVSWTSM 385
Query: 304 IGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGL 363
I Y G +EA+ +F + +TSV P+ TL + LSA A L +L+KGKEI +I G
Sbjct: 386 ISCYVHNGLANEALGVFYLMKETSVEPDSITLVSILSAAASLSALNKGKEIHGFIFRKGF 445
Query: 364 ESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYK 423
SL+ M++ CG + A +VF K L +W+ MIN Y +HG G A+ LF
Sbjct: 446 MLEGSTVNSLVDMYACCGSLENAYKVFICTRSKSLVLWTTMINAYGMHGRGKAAVELFSI 505
Query: 424 MQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRA 483
M+ + L PD + + ++L ACSHSG++++G ++M+ + +EP EHY CLVDLLGRA
Sbjct: 506 MED-QKLIPDHITFLALLYACSHSGLINEGKRLLETMKCKYQLEPWPEHYACLVDLLGRA 564
Query: 484 GRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMA 543
+ A + M +E A+VW L AC H N +LGE AA+ LL L+P S G+Y+L++
Sbjct: 565 NHLEEAYHFVKSMQIEPTAEVWCAFLGACRIHSNKKLGEIAAQKLLDLDPDSPGSYVLIS 624
Query: 544 NLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLK 603
N+F ++G WK+ R M L K PG S +E+ V F+ D+SH S I + L
Sbjct: 625 NVFAASGRWKDVEEVRMRMKGGGLKKNPGCSWIEVGNKVHTFLVRDKSHPESYKIYQKLA 684
Query: 604 ELHIKL-LEAGYIAEADIV 621
++ KL E GY+ + +V
Sbjct: 685 QITEKLEKEGGYVPQTKLV 703
Score = 248 bits (632), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 138/420 (32%), Positives = 240/420 (57%), Gaps = 8/420 (1%)
Query: 25 GVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSS 84
GV +SFTFP VLKAC + I G +H ++K G+ FV L+ MY+KC+D + +
Sbjct: 5 GVPFDSFTFPCVLKACGVVEDIHRGAEIHGLIIKCGYDSIVFVANSLVSMYAKCNDILGA 64
Query: 85 RKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGC- 143
RK+ D M R VVSWNSIISA+S EA+ + +EM G+ + T V+ + C
Sbjct: 65 RKLFDRMNER-NDVVSWNSIISAYSLNGQCMEALGLFREMQKAGVGANTYTLVAALQACE 123
Query: 144 --SFRQ-GISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWT 200
SF++ G+ +H + K + ++ +AN++++M+ +FGK++ A IFDE+ E ++W
Sbjct: 124 DSSFKKLGMEIHAAILKSNQV-LDVYVANALVAMHVRFGKMSYAARIFDELDEKDNITWN 182
Query: 201 TIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKS 260
++I G+ G NEA ++ ++ PD V ++++ ++G L +H+ +K+
Sbjct: 183 SMIAGFTQNGLYNEALQFFCGLQDANLKPDEVSLISILAASGRLGYLLNGKEIHAYAMKN 242
Query: 261 GYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLF 320
++ + N L+ MY+KC + A VFD ++ K + WT++I YAQ +EA+ L
Sbjct: 243 WLDSNLRIGNTLIDMYSKCCCVAYAGLVFDKMINKDLISWTTVIAAYAQNNCHTEALKLL 302
Query: 321 KRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKC 380
+++ + + + +TL AC+ L LS KE+ Y + GL S+ +Q +I +++ C
Sbjct: 303 RKVQTKGMDVDTMMIGSTLLACSGLRCLSHAKEVHGYTLKRGL-SDLMMQNMIIDVYADC 361
Query: 381 GRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSI 440
G IN A +FE + KD+ W++MI+ Y +G+ ++AL +FY M+ ++PD++ SI
Sbjct: 362 GNINYATRMFESIKCKDVVSWTSMISCYVHNGLANEALGVFYLMKETS-VEPDSITLVSI 420
Score = 179 bits (454), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 111/327 (33%), Positives = 176/327 (53%), Gaps = 7/327 (2%)
Query: 124 MWVLGLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFG 179
M VLG+ + TF V+ C +G +H + K G ++ + +ANS++SMYAK
Sbjct: 1 MRVLGVPFDSFTFPCVLKACGVVEDIHRGAEIHGLIIKCGY-DSIVFVANSLVSMYAKCN 59
Query: 180 KVNEARSIFDEIGE-TSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLI 238
+ AR +FD + E +VSW +II Y G EA GL +M++ V + + +
Sbjct: 60 DILGARKLFDRMNERNDVVSWNSIISAYSLNGQCMEALGLFREMQKAGVGANTYTLVAAL 119
Query: 239 LGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVF 298
C L + +H+ +LKS + + N LV+M+ + G + A R+FD + EK
Sbjct: 120 QACEDSSFKKLGMEIHAAILKSNQVLDVYVANALVAMHVRFGKMSYAARIFDELDEKDNI 179
Query: 299 LWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYI 358
W SMI G+ Q G +EA+ F L +++P+E +L + L+A LG L GKEI Y
Sbjct: 180 TWNSMIAGFTQNGLYNEALQFFCGLQDANLKPDEVSLISILAASGRLGYLLNGKEIHAYA 239
Query: 359 VLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQAL 418
+ N L+SN ++ +LI M+SKC + A VF+++ +KDL W+ +I YA + +AL
Sbjct: 240 MKNWLDSNLRIGNTLIDMYSKCCCVAYAGLVFDKMINKDLISWTTVIAAYAQNNCHTEAL 299
Query: 419 NLFYKMQHVEGLKPDAVVYTSILSACS 445
L K+Q +G+ D ++ S L ACS
Sbjct: 300 KLLRKVQ-TKGMDVDTMMIGSTLLACS 325
Score = 168 bits (425), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 117/420 (27%), Positives = 202/420 (48%), Gaps = 16/420 (3%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI T NG + E L + + + + + +L A + + +GK +H++ +K
Sbjct: 184 MIAGFTQNGLYNEALQFFCGLQDANLKPDEVSLISILAASGRLGYLLNGKEIHAYAMKNW 243
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+ + LIDMYSKC + V D+M + ++SW ++I+A+++ + EA+ +
Sbjct: 244 LDSNLRIGNTLIDMYSKCCCVAYAGLVFDKMIN--KDLISWTTVIAAYAQNNCHTEALKL 301
Query: 121 LKEMWVLGLELSASTFVSVVSGCSFRQGIS----MHCCVYKLGLLNNEIPLANSVMSMYA 176
L+++ G+++ S + CS + +S +H K GL +++ + N ++ +YA
Sbjct: 302 LRKVQTKGMDVDTMMIGSTLLACSGLRCLSHAKEVHGYTLKRGL--SDLMMQNMIIDVYA 359
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
G +N A +F+ I +VSWT++I YV+ G NEA G+ M+ SV PD + ++
Sbjct: 360 DCGNINYATRMFESIKCKDVVSWTSMISCYVHNGLANEALGVFYLMKETSVEPDSITLVS 419
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
++ A + L +H + + G+ E N LV MY CG LE A +VF KS
Sbjct: 420 ILSAAASLSALNKGKEIHGFIFRKGFMLEGSTVNSLVDMYACCGSLENAYKVFICTRSKS 479
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEE 356
+ LWT+MI Y G AV LF + + P+ T L AC+ G +++GK + E
Sbjct: 480 LVLWTTMINAYGMHGRGKAAVELFSIMEDQKLIPDHITFLALLYACSHSGLINEGKRLLE 539
Query: 357 YIVLN-GLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDL----AVWSAMINGYAIH 411
+ LE + L+ + GR N +E + V + VW A + IH
Sbjct: 540 TMKCKYQLEPWPEHYACLVDLL---GRANHLEEAYHFVKSMQIEPTAEVWCAFLGACRIH 596
>gi|359490555|ref|XP_003634110.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Vitis vinifera]
Length = 678
Score = 333 bits (855), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 190/576 (32%), Positives = 317/576 (55%), Gaps = 44/576 (7%)
Query: 50 KRVHSHV-LKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAH 108
K++HS + + + + L+ Y+ C + S+R + DE+P + +VV +N +I ++
Sbjct: 55 KKLHSKICIDHDLHSNPSLGIKLMRAYAVCGEPWSTRHIFDEIPKK--NVVFFNVMIRSY 112
Query: 109 SRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCSFRQ----GISMHCCVYKLGLLNNE 164
L +A+LV K M G++ T+ V+ S + G+ +H V ++GL N
Sbjct: 113 VNNHLYSDALLVFKNMAGHGIDPDHYTYPCVLKASSGSEDLWVGMQIHAAVVRVGLDLN- 171
Query: 165 IPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRR 224
+ + N ++SMY K G + EA + D++ +VSW +++ G G ++A +C +M
Sbjct: 172 VFVGNGLISMYGKCGCLVEACRVLDQMPCRDVVSWNSLVAGCARNGQFDDALEVCKEMEL 231
Query: 225 MSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGD-LE 283
+ + PD A +M SLL ++ C D +
Sbjct: 232 LGLKPD-------------------AGTMASLL---------------PAVTNTCLDNVS 257
Query: 284 LARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACA 343
+ +F + KS+ W MI Y P+EAV++F ++ +V P+ ++A+ L AC
Sbjct: 258 FVKEMFMKLANKSLVSWNVMIAVYMNNSMPAEAVDIFLQMEDHAVDPDAISIASVLPACG 317
Query: 344 ELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSA 403
+L +L G+ I EY+V L+ N ++ +LI M++KCG + A+EVF+++ +D+ W++
Sbjct: 318 DLSALLLGRRIHEYVVRKRLQPNLLLENALIDMYAKCGCLEYAREVFDQMKFRDVVSWTS 377
Query: 404 MINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSN 463
MI+ Y ++G G A++LF +MQ + GL PD++ + S+LSACSH+G++D+G +FK M
Sbjct: 378 MISAYGMNGKGRDAVSLFSRMQDL-GLNPDSIAFVSVLSACSHAGLLDEGRYYFKLMTEE 436
Query: 464 FGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEY 523
I P IEH++C+VDLLGRAG+ D A I +MP+E +VW LLSAC + N+ +G
Sbjct: 437 CKIVPRIEHFVCMVDLLGRAGQVDEAYGFIKQMPMEPNERVWGALLSACRVYSNMIIGLL 496
Query: 524 AAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQ 583
AA L L P +G Y+L++N++ AG W++ T R +M + + K PG S E+D V
Sbjct: 497 AADQLFQLCPEQSGYYVLLSNIYAKAGRWEDVTTVRSIMKTKGIKKMPGVSNFELDNRVH 556
Query: 584 VFVAGDRSHHLSVDIRKTLKELHIKLLEAGYIAEAD 619
F+AGD+SH S I + L K+ EAGY+ E D
Sbjct: 557 TFLAGDQSHPQSKQIYEELDVSVGKMKEAGYVPETD 592
Score = 199 bits (505), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 121/417 (29%), Positives = 207/417 (49%), Gaps = 42/417 (10%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MIR+ NN + + L + +M G+ + +T+P VLKA + +W G ++H+ V++VG
Sbjct: 108 MIRSYVNNHLYSDALLVFKNMAGHGIDPDHYTYPCVLKASSGSEDLWVGMQIHAAVVRVG 167
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+ FV GLI MY KC V + +VLD+MP R VVSWNS+++ +R D+A+ V
Sbjct: 168 LDLNVFVGNGLISMYGKCGCLVEACRVLDQMPC--RDVVSWNSLVAGCARNGQFDDALEV 225
Query: 121 LKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGK 180
KEM +LGL+ A T S++ + N+ +
Sbjct: 226 CKEMELLGLKPDAGTMASLLPA------------------------VTNTCLD------N 255
Query: 181 VNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILG 240
V+ + +F ++ S+VSW +I Y+N EA + QM +V PD + +++
Sbjct: 256 VSFVKEMFMKLANKSLVSWNVMIAVYMNNSMPAEAVDIFLQMEDHAVDPDAISIASVLPA 315
Query: 241 CAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLW 300
C + L L +H +++ L+N L+ MY KCG LE AR VFD + + V W
Sbjct: 316 CGDLSALLLGRRIHEYVVRKRLQPNLLLENALIDMYAKCGCLEYAREVFDQMKFRDVVSW 375
Query: 301 TSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKE-----IE 355
TSMI Y G +AV+LF R+ + P+ + LSAC+ G L +G+ E
Sbjct: 376 TSMISAYGMNGKGRDAVSLFSRMQDLGLNPDSIAFVSVLSACSHAGLLDEGRYYFKLMTE 435
Query: 356 EYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVP-DKDLAVWSAMINGYAIH 411
E ++ +E ++ + + G++++A +++P + + VW A+++ ++
Sbjct: 436 ECKIVPRIEHF----VCMVDLLGRAGQVDEAYGFIKQMPMEPNERVWGALLSACRVY 488
>gi|357167761|ref|XP_003581320.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39952,
mitochondrial-like [Brachypodium distachyon]
Length = 773
Score = 333 bits (855), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 188/566 (33%), Positives = 314/566 (55%), Gaps = 14/566 (2%)
Query: 23 QTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFV 82
+G NS T L+AC + + G+ +H + +K G + A V + L MYSKC
Sbjct: 214 DSGARPNSRTMESGLEACGVLGELSAGRCLHGYAVKEGIRDCALVVSALFSMYSKCDMTE 273
Query: 83 SSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSG 142
+ + E+ + VVSW +I A+ R L EA+ + +EM GL+ V+SG
Sbjct: 274 DACILFPELTEK--DVVSWTGLIGAYCRRGLAREAVELFQEMEQSGLQPDEVLVSCVLSG 331
Query: 143 ----CSFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVS 198
+ +G + H + + + + +ANS++SMY KF V+ A ++F + + S
Sbjct: 332 LGSSANVNRGKAFHAVIIRRNF-GDSVLIANSLISMYGKFELVDVAGTVFGMLHQRDDES 390
Query: 199 WTTIIGGYVNVGNVNEAFGLCNQMR---RMSVTPDLVVFLNLILGCAQVGNLFLALSMHS 255
W+ ++ GY G + L QM+ D+ ++ I C+++G L L S+H
Sbjct: 391 WSLMVAGYCKAGLDVKCLELYRQMQCRDHDEFLCDITSLVSAISSCSRLGRLRLGQSVHC 450
Query: 256 LLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFD-AVLEKSVFLWTSMIGGYAQLGYPS 314
+K +E+ + N L+ MY +CG+ ELA ++F A L + V W ++I Y+ +G +
Sbjct: 451 YSIKC-LLDENSITNSLIGMYGRCGNFELACKIFAVAKLRRDVVTWNALISSYSHVGRSN 509
Query: 315 EAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLI 374
+A++L+ ++L V+PN +TL T +SACA L +L G+ + Y+ GLES+ + T+L+
Sbjct: 510 DALSLYGQMLTEDVKPNSSTLITVISACANLAALEHGELLHSYVKNMGLESDVSISTALV 569
Query: 375 HMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDA 434
M++KCG++ A+ +F+ + +D+ W+ MI+GY +HG +QAL LF +M+ +KP++
Sbjct: 570 DMYTKCGQLGTARGIFDSMLQRDVVTWNVMISGYGMHGEANQALKLFSEME-AGSIKPNS 628
Query: 435 VVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIH 494
+ + +ILSAC H+G+VD+G F M + +EP+++HY C+VDLLG++G A +
Sbjct: 629 LTFLAILSACCHAGLVDEGRKLFIRM-GGYRLEPNLKHYACMVDLLGKSGLLQEAEDLVL 687
Query: 495 EMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKE 554
MP++ VW LLSAC H N E+G AK + +P + G YILM+N + SA W E
Sbjct: 688 AMPIKPDGGVWGTLLSACKVHDNFEMGLRVAKKAFSSDPRNDGYYILMSNSYGSAEKWDE 747
Query: 555 AATARGLMDDRRLTKEPGWSQVEIDG 580
R M + + K GWS V++ G
Sbjct: 748 IEKLRDTMKNYGVEKGVGWSAVDVWG 773
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 135/533 (25%), Positives = 255/533 (47%), Gaps = 28/533 (5%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
++R+ F+ LS + M +G + FT PL A A + ++ G VHS+ +K G
Sbjct: 84 LLRSHHCASDFDSALSAHRRMRASGARPSRFTAPLAASAAAELAALPVGTSVHSYSVKFG 143
Query: 61 F---QQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEA 117
V + L+ MY++C + K+ DEM R VV+W +++S R +
Sbjct: 144 LLAGDGSVAVSSSLVYMYARCGSLGDAVKLFDEMVE--RDVVAWTAVVSGCVRNGECGKG 201
Query: 118 ILVLKEMWVL----GLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLAN 169
I L +M L G ++ T S + C G +H K G+ + + + +
Sbjct: 202 ICYLVQMIRLAGDSGARPNSRTMESGLEACGVLGELSAGRCLHGYAVKEGIRDCAL-VVS 260
Query: 170 SVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTP 229
++ SMY+K +A +F E+ E +VSWT +IG Y G EA L +M + + P
Sbjct: 261 ALFSMYSKCDMTEDACILFPELTEKDVVSWTGLIGAYCRRGLAREAVELFQEMEQSGLQP 320
Query: 230 DLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVF 289
D V+ ++ G N+ + H+++++ + + + N L+SMY K +++A VF
Sbjct: 321 DEVLVSCVLSGLGSSANVNRGKAFHAVIIRRNFGDSVLIANSLISMYGKFELVDVAGTVF 380
Query: 290 DAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNE------ATLATTLSACA 343
+ ++ W+ M+ GY + G + + L++++ R ++ +L + +S+C+
Sbjct: 381 GMLHQRDDESWSLMVAGYCKAGLDVKCLELYRQM---QCRDHDEFLCDITSLVSAISSCS 437
Query: 344 ELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVP-DKDLAVWS 402
LG L G+ + Y + L+ N + SLI M+ +CG A ++F +D+ W+
Sbjct: 438 RLGRLRLGQSVHCYSIKCLLDEN-SITNSLIGMYGRCGNFELACKIFAVAKLRRDVVTWN 496
Query: 403 AMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQS 462
A+I+ Y+ G + AL+L+ +M E +KP++ +++SAC++ ++ G S
Sbjct: 497 ALISSYSHVGRSNDALSLYGQML-TEDVKPNSSTLITVISACANLAALEHG-ELLHSYVK 554
Query: 463 NFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKH 515
N G+E + LVD+ + G+ A + I + ++ W ++S H
Sbjct: 555 NMGLESDVSISTALVDMYTKCGQLGTA-RGIFDSMLQRDVVTWNVMISGYGMH 606
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 119/424 (28%), Positives = 195/424 (45%), Gaps = 16/424 (3%)
Query: 101 WNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCSFRQ----GISMHCCVY 156
WNS++ +H A D A+ + M G S T S + G S+H
Sbjct: 81 WNSLLRSHHCASDFDSALSAHRRMRASGARPSRFTAPLAASAAAELAALPVGTSVHSYSV 140
Query: 157 KLGLL--NNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNE 214
K GLL + + +++S++ MYA+ G + +A +FDE+ E +V+WT ++ G V G +
Sbjct: 141 KFGLLAGDGSVAVSSSLVYMYARCGSLGDAVKLFDEMVERDVVAWTAVVSGCVRNGECGK 200
Query: 215 AFGLCNQMRRMS----VTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDN 270
QM R++ P+ + + C +G L +H +K G + + +
Sbjct: 201 GICYLVQMIRLAGDSGARPNSRTMESGLEACGVLGELSAGRCLHGYAVKEGIRDCALVVS 260
Query: 271 LLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRP 330
L SMY+KC E A +F + EK V WT +IG Y + G EAV LF+ + ++ ++P
Sbjct: 261 ALFSMYSKCDMTEDACILFPELTEKDVVSWTGLIGAYCRRGLAREAVELFQEMEQSGLQP 320
Query: 331 NEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVF 390
+E ++ LS ++++GK I+ + + SLI M+ K ++ A VF
Sbjct: 321 DEVLVSCVLSGLGSSANVNRGKAFHAVIIRRNFGDSVLIANSLISMYGKFELVDVAGTVF 380
Query: 391 ERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQ---HVEGLKPDAVVYTSILSACSHS 447
+ +D WS M+ GY G+ + L L+ +MQ H E L D S +S+CS
Sbjct: 381 GMLHQRDDESWSLMVAGYCKAGLDVKCLELYRQMQCRDHDEFL-CDITSLVSAISSCSRL 439
Query: 448 GMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAP 507
G + G S E SI + L+ + GR G F+LA K + W
Sbjct: 440 GRLRLGQSVHCYSIKCLLDENSITNS--LIGMYGRCGNFELACKIFAVAKLRRDVVTWNA 497
Query: 508 LLSA 511
L+S+
Sbjct: 498 LISS 501
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 92/362 (25%), Positives = 167/362 (46%), Gaps = 12/362 (3%)
Query: 161 LNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCN 220
L++ A ++S Y+ G A F W +++ + + + A
Sbjct: 43 LSSRPDFAAKLVSAYSSSGLPGFATLAFSASPCPDTFLWNSLLRSHHCASDFDSALSAHR 102
Query: 221 QMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNED---PLDNLLVSMYT 277
+MR P A++ L + S+HS +K G D + + LV MY
Sbjct: 103 RMRASGARPSRFTAPLAASAAAELAALPVGTSVHSYSVKFGLLAGDGSVAVSSSLVYMYA 162
Query: 278 KCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLK----TSVRPNEA 333
+CG L A ++FD ++E+ V WT+++ G + G + + ++++ + RPN
Sbjct: 163 RCGSLGDAVKLFDEMVERDVVAWTAVVSGCVRNGECGKGICYLVQMIRLAGDSGARPNSR 222
Query: 334 TLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERV 393
T+ + L AC LG LS G+ + Y V G+ V ++L M+SKC A +F +
Sbjct: 223 TMESGLEACGVLGELSAGRCLHGYAVKEGIRDCALVVSALFSMYSKCDMTEDACILFPEL 282
Query: 394 PDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDG 453
+KD+ W+ +I Y G+ +A+ LF +M+ GL+PD V+ + +LS S V+ G
Sbjct: 283 TEKDVVSWTGLIGAYCRRGLAREAVELFQEMEQ-SGLQPDEVLVSCVLSGLGSSANVNRG 341
Query: 454 LSFFKS-MQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSAC 512
+F ++ NFG I + L+ + G+ D+A T+ M + + W+ +++
Sbjct: 342 KAFHAVIIRRNFGDSVLIANS--LISMYGKFELVDVA-GTVFGMLHQRDDESWSLMVAGY 398
Query: 513 MK 514
K
Sbjct: 399 CK 400
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 81/143 (56%), Gaps = 2/143 (1%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+I + ++ G + LS Y ML V NS T V+ ACAN+ ++ G+ +HS+V +G
Sbjct: 498 LISSYSHVGRSNDALSLYGQMLTEDVKPNSSTLITVISACANLAALEHGELLHSYVKNMG 557
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+ D + T L+DMY+KC ++R + D M R VV+WN +IS + ++A+ +
Sbjct: 558 LESDVSISTALVDMYTKCGQLGTARGIFDSM--LQRDVVTWNVMISGYGMHGEANQALKL 615
Query: 121 LKEMWVLGLELSASTFVSVVSGC 143
EM ++ ++ TF++++S C
Sbjct: 616 FSEMEAGSIKPNSLTFLAILSAC 638
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 101/213 (47%), Gaps = 6/213 (2%)
Query: 247 LFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGG 306
L L +H+L SG ++ LVS Y+ G A F A FLW S++
Sbjct: 28 LIALLRLHALASTSGLSSRPDFAAKLVSAYSSSGLPGFATLAFSASPCPDTFLWNSLLRS 87
Query: 307 YAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGL--- 363
+ A++ +R+ + RP+ T SA AEL +L G + Y V GL
Sbjct: 88 HHCASDFDSALSAHRRMRASGARPSRFTAPLAASAAAELAALPVGTSVHSYSVKFGLLAG 147
Query: 364 ESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYK 423
+ + V +SL++M+++CG + A ++F+ + ++D+ W+A+++G +G + + +
Sbjct: 148 DGSVAVSSSLVYMYARCGSLGDAVKLFDEMVERDVVAWTAVVSGCVRNGECGKGICYLVQ 207
Query: 424 MQHV---EGLKPDAVVYTSILSACSHSGMVDDG 453
M + G +P++ S L AC G + G
Sbjct: 208 MIRLAGDSGARPNSRTMESGLEACGVLGELSAG 240
>gi|147806113|emb|CAN65480.1| hypothetical protein VITISV_030746 [Vitis vinifera]
Length = 686
Score = 333 bits (855), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 192/586 (32%), Positives = 320/586 (54%), Gaps = 24/586 (4%)
Query: 42 NINSIWDGKRVH---SHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSV 98
N+ S K+VH + ++ GFQ + ++ L+ + + +R++ D++P ++
Sbjct: 107 NMRSCKTSKQVHQIQAQIIANGFQYNEYITPKLVTICATLKRMTYARQLFDQIPDP--NI 164
Query: 99 VSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGC----SFRQGISMHCC 154
WNS+ ++++ E + + +M + + + TF V+ C + +G +HC
Sbjct: 165 ALWNSMFRGYAQSESYREVVFLFFQMKGMDIRPNCFTFPVVLKSCGKINALIEGEQVHCF 224
Query: 155 VYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNE 214
+ K G N + +++ MY+ G V +A IF E+ E ++V+WT++I GY+ +
Sbjct: 225 LIKCGFRGNPF-VGTTLIDMYSAGGTVGDAYKIFCEMFERNVVAWTSMINGYILSAD--- 280
Query: 215 AFGLCNQMRRMSVTP--DLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLL 272
L + R + P D+V++ ++ G + G++ A L N + N +
Sbjct: 281 ---LVSARRLFDLAPERDVVLWNIMVSGYIEGGDMVEARK----LFXEMPNRDVMFWNTV 333
Query: 273 VSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTS-VRPN 331
+ Y G++E +F+ + E+++F W ++IGGYA G E + FKR+L S V PN
Sbjct: 334 LKGYATNGNVEALEGLFEEMPERNIFSWNALIGGYAHNGLFFEVLGSFKRMLSESDVPPN 393
Query: 332 EATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFE 391
+ATL T LSACA LG+L GK + Y +GL+ N V +L+ M++KCG I A VF
Sbjct: 394 DATLVTVLSACARLGALDLGKWVHVYAESSGLKGNVYVGNALMDMYAKCGIIENAISVFR 453
Query: 392 RVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVD 451
+ KDL W+ +I G A+H G ALNLF++M++ G KPD + + IL AC+H G+V+
Sbjct: 454 GMDTKDLISWNTLIGGLAMHSRGADALNLFFQMKNA-GQKPDGITFIGILCACTHMGLVE 512
Query: 452 DGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSA 511
DG ++F+SM ++ I P IEHY C+VD+L RAGR + A + +MPVE +WA LL A
Sbjct: 513 DGFAYFQSMADDYLIMPQIEHYGCMVDMLARAGRLEQAXAFVRKMPVEADGVIWAGLLGA 572
Query: 512 CMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEP 571
C + NVEL E A + L+ L P + NY++++N++ AG W++ A + M D K P
Sbjct: 573 CRIYKNVELAELALQRLIELEPKNPANYVMLSNIYGDAGRWEDVARLKVAMRDTGFKKLP 632
Query: 572 GWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKELHIKLLEAGYIAE 617
G S +E++ +V F + D H +I L+ L L GY+ +
Sbjct: 633 GCSLIEVNDAVVEFYSLDERHPQIEEIYGVLRGLVKVLRSFGYVPD 678
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 116/418 (27%), Positives = 203/418 (48%), Gaps = 18/418 (4%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
M R + S+ E + + M + N FTFP+VLK+C IN++ +G++VH ++K G
Sbjct: 170 MFRGYAQSESYREVVFLFFQMKGMDIRPNCFTFPVVLKSCGKINALIEGEQVHCFLIKCG 229
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F+ + FV T LIDMYS + K+ EM R+VV+W S+I+ + + ++
Sbjct: 230 FRGNPFVGTTLIDMYSAGGTVGDAYKIFCEM--FERNVVAWTSMINGY----ILSADLVS 283
Query: 121 LKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGK 180
+ ++ L E + +VSG G + + N ++ N+V+ YA G
Sbjct: 284 ARRLFDLAPERDVVLWNIMVSG-YIEGGDMVEARKLFXEMPNRDVMFWNTVLKGYATNGN 342
Query: 181 VNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMS-VTPDLVVFLNLIL 239
V +F+E+ E +I SW +IGGY + G E G +M S V P+ + ++
Sbjct: 343 VEALEGLFEEMPERNIFSWNALIGGYAHNGLFFEVLGSFKRMLSESDVPPNDATLVTVLS 402
Query: 240 GCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFL 299
CA++G L L +H SG + N L+ MY KCG +E A VF + K +
Sbjct: 403 ACARLGALDLGKWVHVYAESSGLKGNVYVGNALMDMYAKCGIIENAISVFRGMDTKDLIS 462
Query: 300 WTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKG-----KEI 354
W ++IGG A ++A+NLF ++ +P+ T L AC +G + G
Sbjct: 463 WNTLIGGLAMHSRGADALNLFFQMKNAGQKPDGITFIGILCACTHMGLVEDGFAYFQSMA 522
Query: 355 EEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVP-DKDLAVWSAMINGYAIH 411
++Y+++ +E ++ M ++ GR+ +A ++P + D +W+ ++ I+
Sbjct: 523 DDYLIMPQIEH----YGCMVDMLARAGRLEQAXAFVRKMPVEADGVIWAGLLGACRIY 576
>gi|224068783|ref|XP_002302824.1| predicted protein [Populus trichocarpa]
gi|222844550|gb|EEE82097.1| predicted protein [Populus trichocarpa]
Length = 581
Score = 333 bits (855), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 181/504 (35%), Positives = 285/504 (56%), Gaps = 13/504 (2%)
Query: 124 MWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFG 179
M LG++ TF ++ CS F GI +H V K G +++ ++NS+++MY K
Sbjct: 1 MLRLGIQPDNFTFPFIIKACSCLRHFEFGIRIHQDVVKFGY-QSQVFISNSLITMYGKCD 59
Query: 180 KVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLIL 239
K +R +FDE+ + + VSW+ IIG + E F L QM P LN +
Sbjct: 60 KYELSRQVFDEMPDKNAVSWSAIIGACLQDDRCKEGFSLFRQMLSEGSRPSRGAILNAM- 118
Query: 240 GCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFL 299
A V + A ++ +++++G + + + + M+ +CG +E+AR++FD ++ K +
Sbjct: 119 --ACVRSHEEADDVYRVVVENGLDFDQSVQSAAAGMFARCGRVEVARKLFDGIMSKDLVT 176
Query: 300 WTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIV 359
W + I Y + P EA+ L K+++ + P+ TL + AC+ L S I I+
Sbjct: 177 WATTIEAYVKADMPLEALGLLKQMMLQGIFPDAITLLGVIRACSTLASFQLA-HIVHGII 235
Query: 360 LNGLESNR--QVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQA 417
G N+ V+T+LI ++ KCG + A++VF+ + ++++ WSAMI+GY +HG G +A
Sbjct: 236 TTGFFYNQLLAVETALIDLYVKCGSLTYARKVFDGMQERNIITWSAMISGYGMHGWGREA 295
Query: 418 LNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLV 477
LNLF +M+ +KPD + + SILSACSHSG+V +G F SM +FG+ P EHY C+V
Sbjct: 296 LNLFDQMK--ASVKPDHITFVSILSACSHSGLVAEGWECFNSMARDFGVTPRPEHYACMV 353
Query: 478 DLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTG 537
D+LGRAG+ D A I MPV A VW LL AC H NV+L E A+ L L+P + G
Sbjct: 354 DILGRAGKLDEACDFIERMPVRPNAAVWGALLGACRIHLNVDLAEMVARALFDLDPHNAG 413
Query: 538 NYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVD 597
Y+++ N++T G KEA + R LM +R + K G+S +EI + FVAGDRSH +
Sbjct: 414 RYVILYNIYTLTGKRKEADSIRTLMKNRGVKKIAGYSVIEIKNKLYAFVAGDRSHPQTDL 473
Query: 598 IRKTLKELHIKLLEAGYIAEADIV 621
I L+ L ++ + GY + + V
Sbjct: 474 IYSELERLMDRIRQEGYTPDINFV 497
Score = 218 bits (555), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 126/399 (31%), Positives = 215/399 (53%), Gaps = 16/399 (4%)
Query: 21 MLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSD 80
ML+ G+ ++FTFP ++KAC+ + G R+H V+K G+Q F+ LI MY KC
Sbjct: 1 MLRLGIQPDNFTFPFIIKACSCLRHFEFGIRIHQDVVKFGYQSQVFISNSLITMYGKCDK 60
Query: 81 FVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLND----EAILVLKEMWVLGLELSASTF 136
+ SR+V DEMP ++ VSW++II ACL D E + ++M G S
Sbjct: 61 YELSRQVFDEMPD--KNAVSWSAIIG----ACLQDDRCKEGFSLFRQMLSEGSRPSRGAI 114
Query: 137 VSVVSGC-SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETS 195
++ ++ S + ++ V + G L+ + + ++ M+A+ G+V AR +FD I
Sbjct: 115 LNAMACVRSHEEADDVYRVVVENG-LDFDQSVQSAAAGMFARCGRVEVARKLFDGIMSKD 173
Query: 196 IVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHS 255
+V+W T I YV EA GL QM + PD + L +I C+ + + LA +H
Sbjct: 174 LVTWATTIEAYVKADMPLEALGLLKQMMLQGIFPDAITLLGVIRACSTLASFQLAHIVHG 233
Query: 256 LLLKS-GYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPS 314
++ YN ++ L+ +Y KCG L AR+VFD + E+++ W++MI GY G+
Sbjct: 234 IITTGFFYNQLLAVETALIDLYVKCGSLTYARKVFDGMQERNIITWSAMISGYGMHGWGR 293
Query: 315 EAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLN-GLESNRQVQTSL 373
EA+NLF + +K SV+P+ T + LSAC+ G +++G E + + G+ + +
Sbjct: 294 EALNLFDQ-MKASVKPDHITFVSILSACSHSGLVAEGWECFNSMARDFGVTPRPEHYACM 352
Query: 374 IHMFSKCGRINKAKEVFERVPDK-DLAVWSAMINGYAIH 411
+ + + G++++A + ER+P + + AVW A++ IH
Sbjct: 353 VDILGRAGKLDEACDFIERMPVRPNAAVWGALLGACRIH 391
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 104/240 (43%), Gaps = 36/240 (15%)
Query: 13 ETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGF--QQDAFVQTG 70
E L M+ G+ ++ T V++AC+ + S VH ++ GF Q V+T
Sbjct: 192 EALGLLKQMMLQGIFPDAITLLGVIRACSTLASFQLAHIVHG-IITTGFFYNQLLAVETA 250
Query: 71 LIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLE 130
LID+Y KC +RKV D M + R++++W+++IS + EA+ + +M ++
Sbjct: 251 LIDLYVKCGSLTYARKVFDGM--QERNIITWSAMISGYGMHGWGREALNLFDQMKA-SVK 307
Query: 131 LSASTFVSVVSGCSFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDE 190
TFVS++S CS GL+ NS+ + + + D
Sbjct: 308 PDHITFVSILSACSHS------------GLVAEGWECFNSMARDFGVTPRPEHYACMVDI 355
Query: 191 IGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLA 250
+G G ++EA C+ + RM V P+ V+ L+ C N+ LA
Sbjct: 356 LGRA---------------GKLDEA---CDFIERMPVRPNAAVWGALLGACRIHLNVDLA 397
>gi|357142905|ref|XP_003572732.1| PREDICTED: pentatricopeptide repeat-containing protein At3g26782,
mitochondrial-like [Brachypodium distachyon]
Length = 669
Score = 333 bits (855), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 180/474 (37%), Positives = 277/474 (58%), Gaps = 8/474 (1%)
Query: 148 GISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYV 207
G +H + GL ++ A++++ MY + +AR FDEI + V T + GYV
Sbjct: 108 GRQLHLLAIRSGLFPSDPFSASALLHMYNHCSRPIDARKAFDEIPSPNPVIITAMASGYV 167
Query: 208 NVGNVNEAFGLCNQM--RRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNE 265
V + L ++ + D L A++ + + S+H+L++K+G + +
Sbjct: 168 RNNLVYPSLALFRKLIASGSATAVDEAAALVAFSASARIPDCGITSSLHALVVKTGLDGD 227
Query: 266 DPLDNLLVSMYTKCG--DLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRL 323
+ N ++ Y K G DL AR+VFD +EK V W SMI YAQ G ++A+ L++++
Sbjct: 228 AGVVNTMLDAYAKGGRRDLGAARKVFD-TMEKDVVSWNSMIALYAQNGMSADALGLYRKM 286
Query: 324 LKTS--VRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCG 381
L S ++ N TL+ L ACA G++ GK I +V GLE N V TS++ M+SKCG
Sbjct: 287 LNVSGSIKCNAVTLSAILLACAHAGTIQTGKCIHNQVVRMGLEENVYVGTSVVDMYSKCG 346
Query: 382 RINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSIL 441
R+ A++ F+++ +K++ WSAMI GY +HG G +AL++F +M G P+ + + S+L
Sbjct: 347 RVEMARKAFQKIKEKNILSWSAMITGYGMHGHGQEALDIFNEMCR-SGQNPNYITFISVL 405
Query: 442 SACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQ 501
+ACSH+G++D G ++ +M+ FGIEP +EHY C+VDLLGRAG D A I EM V+
Sbjct: 406 AACSHAGLLDKGRYWYNAMKKRFGIEPGVEHYGCMVDLLGRAGCLDEAYGLIKEMKVKPD 465
Query: 502 AQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGL 561
A +W LLSAC H NVEL E +AK L L+ + G Y+L++N++ AGMWK+ R L
Sbjct: 466 AAIWGALLSACRIHKNVELAEISAKRLFELDATNCGYYVLLSNIYAEAGMWKDVERMRVL 525
Query: 562 MDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKELHIKLLEAGYI 615
+ R + K PG+S VE+ G +F GD+SH +I L +L K+ EAGY+
Sbjct: 526 VKTRGIEKPPGYSSVELKGRTHLFYVGDKSHPQHKEIYSYLGKLLEKMQEAGYV 579
Score = 151 bits (382), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 99/376 (26%), Positives = 194/376 (51%), Gaps = 17/376 (4%)
Query: 49 GKRVHSHVLKVG-FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISA 107
G+++H ++ G F D F + L+ MY+ CS + +RK DE+P +++ ++ S
Sbjct: 108 GRQLHLLAIRSGLFPSDPFSASALLHMYNHCSRPIDARKAFDEIPSPNPVIIT--AMASG 165
Query: 108 HSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCSFRQ----GI--SMHCCVYKLGLL 161
+ R L ++ + +++ G + ++V+ + + GI S+H V K G L
Sbjct: 166 YVRNNLVYPSLALFRKLIASGSATAVDEAAALVAFSASARIPDCGITSSLHALVVKTG-L 224
Query: 162 NNEIPLANSVMSMYAKFGK--VNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLC 219
+ + + N+++ YAK G+ + AR +FD + E +VSW ++I Y G +A GL
Sbjct: 225 DGDAGVVNTMLDAYAKGGRRDLGAARKVFDTM-EKDVVSWNSMIALYAQNGMSADALGLY 283
Query: 220 NQMRRM--SVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYT 277
+M + S+ + V ++L CA G + +H+ +++ G + +V MY+
Sbjct: 284 RKMLNVSGSIKCNAVTLSAILLACAHAGTIQTGKCIHNQVVRMGLEENVYVGTSVVDMYS 343
Query: 278 KCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLAT 337
KCG +E+AR+ F + EK++ W++MI GY G+ EA+++F + ++ PN T +
Sbjct: 344 KCGRVEMARKAFQKIKEKNILSWSAMITGYGMHGHGQEALDIFNEMCRSGQNPNYITFIS 403
Query: 338 TLSACAELGSLSKGKEIEEYIVLN-GLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDK 396
L+AC+ G L KG+ + G+E + ++ + + G +++A + + + K
Sbjct: 404 VLAACSHAGLLDKGRYWYNAMKKRFGIEPGVEHYGCMVDLLGRAGCLDEAYGLIKEMKVK 463
Query: 397 -DLAVWSAMINGYAIH 411
D A+W A+++ IH
Sbjct: 464 PDAAIWGALLSACRIH 479
Score = 89.0 bits (219), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 118/252 (46%), Gaps = 34/252 (13%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTG--VHGNSFTFPLVLKACANINSIWDGKRVHSHVLK 58
MI NG + L Y ML + N+ T +L ACA+ +I GK +H+ V++
Sbjct: 266 MIALYAQNGMSADALGLYRKMLNVSGSIKCNAVTLSAILLACAHAGTIQTGKCIHNQVVR 325
Query: 59 VGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAI 118
+G +++ +V T ++DMYSKC +RK + ++ ++++SW+++I+ + EA+
Sbjct: 326 MGLEENVYVGTSVVDMYSKCGRVEMARKAFQK--IKEKNILSWSAMITGYGMHGHGQEAL 383
Query: 119 LVLKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKF 178
+ EM G + TF+SV++ CS GLL+ N +M +F
Sbjct: 384 DIFNEMCRSGQNPNYITFISVLAACSH------------AGLLDKGRYWYN---AMKKRF 428
Query: 179 GKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLI 238
G E + + ++ G ++EA+GL +M+ V PD ++ L+
Sbjct: 429 GI------------EPGVEHYGCMVDLLGRAGCLDEAYGLIKEMK---VKPDAAIWGALL 473
Query: 239 LGCAQVGNLFLA 250
C N+ LA
Sbjct: 474 SACRIHKNVELA 485
>gi|90657601|gb|ABD96900.1| hypothetical protein [Cleome spinosa]
Length = 924
Score = 333 bits (854), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 189/623 (30%), Positives = 335/623 (53%), Gaps = 35/623 (5%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+I N + L + M + GV + + VLK+CA + + G ++H+H LK
Sbjct: 253 IIAGCVQNNFLDGGLKMFKEMQKVGVGVSQSIYASVLKSCATLPDLRLGTQLHAHALKSD 312
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F +D V+T +DMY+KC++ ++++ D M L ++ S+N++I+ +S+ A+L+
Sbjct: 313 FVKDGIVRTATLDMYAKCNNMQDAQRLFD-MSENL-NLQSYNAMITGYSQKDNGFRALLL 370
Query: 121 LKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGLLNN---EIPLANSVMSMYAK 177
+++ L + + C+ +G+S ++ L +N I +AN+ + MY K
Sbjct: 371 FRKLSKSSLGFDEISLSGALRACATVKGLSEGLQLHGLATKSNFSRNICVANAFIDMYGK 430
Query: 178 FGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNL 237
++EA +FDE+G VSW II + ++ + M R + PD F ++
Sbjct: 431 CEALDEACRVFDEMGRKDAVSWNAIIAAHEQNEERSKTLNILVSMLRSGMEPDEYTFGSV 490
Query: 238 ILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAV----- 292
+ CA +L + +H+ ++K G + + + LV MY+KCG ++ A ++ + +
Sbjct: 491 LKACAG-DSLNHGMEIHTTIVKLGMASNPYIGSSLVDMYSKCGMIDEAEKIHNKIFIGIG 549
Query: 293 ----------------------LEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRP 330
+++ + W ++I GY +A F R+++ + P
Sbjct: 550 DSNTYSEHPETIEEPKGIQDRRVQEMIVSWNAIISGYVMRKQSEDAQRFFNRMMEMGITP 609
Query: 331 NEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVF 390
++ T +T L CA L S+ GK+I +++ L+ + + ++L+ M+SKCG ++ ++ +F
Sbjct: 610 DKFTYSTVLDTCANLASIGLGKQIHAHVIKKELQYDVYICSTLVDMYSKCGNLHDSRLMF 669
Query: 391 ERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMV 450
E+ P +D W+AMI GYA HGMG++A+ LF M + + P+ + S+L AC+H G+V
Sbjct: 670 EKAPIRDFVTWNAMICGYAHHGMGEEAIKLFESMV-LMNIMPNHATFVSLLRACAHMGLV 728
Query: 451 DDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLS 510
+ GL +F M+ +G++P +EHY +VD+LG++G + AL+ I EMP E +W LLS
Sbjct: 729 ERGLDYFHMMKKEYGLDPRLEHYSNMVDILGKSGEVEKALELIQEMPFEADDVIWRTLLS 788
Query: 511 AC-MKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTK 569
AC + +NVE E AA LL L+P + YIL++N++ AGMW +A+ R M +L K
Sbjct: 789 ACKINRNNVEAAEVAANALLRLDPQDSSTYILLSNIYADAGMWDKASELRTAMRSDKLKK 848
Query: 570 EPGWSQVEIDGSVQVFVAGDRSH 592
EPG S VEI F+ GD++H
Sbjct: 849 EPGCSWVEIRDEFHTFLVGDKAH 871
Score = 201 bits (510), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 147/561 (26%), Positives = 268/561 (47%), Gaps = 49/561 (8%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
M+ G E++ + M ++GV ++ +F ++LK C+ + + G ++H L++G
Sbjct: 152 MLSGFLQTGENLESVKVFIEMGRSGVEFDNKSFSVILKVCSILENYKLGTQIHGIALRMG 211
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+ D + L+DMY+KC S V MP ++ +SW++II+ + D + +
Sbjct: 212 YDTDVVSGSALLDMYAKCKRLDESFTVFYAMPQ--KNWISWSAIIAGCVQNNFLDGGLKM 269
Query: 121 LKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
KEM +G+ +S S + SV+ C+ R G +H K + + I + + + MYA
Sbjct: 270 FKEMQKVGVGVSQSIYASVLKSCATLPDLRLGTQLHAHALKSDFVKDGI-VRTATLDMYA 328
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K + +A+ +FD ++ S+ +I GY N A L ++ + S+ D +
Sbjct: 329 KCNNMQDAQRLFDMSENLNLQSYNAMITGYSQKDNGFRALLLFRKLSKSSLGFDEISLSG 388
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
+ CA V L L +H L KS ++ + N + MY KC L+ A RVFD + K
Sbjct: 389 ALRACATVKGLSEGLQLHGLATKSNFSRNICVANAFIDMYGKCEALDEACRVFDEMGRKD 448
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEE 356
W ++I + Q S+ +N+ +L++ + P+E T + L ACA SL+ G EI
Sbjct: 449 AVSWNAIIAAHEQNEERSKTLNILVSMLRSGMEPDEYTFGSVLKACAG-DSLNHGMEIHT 507
Query: 357 YIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERV-------------PD-------- 395
IV G+ SN + +SL+ M+SKCG I++A+++ ++ P+
Sbjct: 508 TIVKLGMASNPYIGSSLVDMYSKCGMIDEAEKIHNKIFIGIGDSNTYSEHPETIEEPKGI 567
Query: 396 KDLAV------WSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGM 449
+D V W+A+I+GY + + A F +M + G+ PD Y+++L C++
Sbjct: 568 QDRRVQEMIVSWNAIISGYVMRKQSEDAQRFFNRMMEM-GITPDKFTYSTVLDTCANLAS 626
Query: 450 VDDGLSFFKSMQSNFGIEPSIEH--YLC--LVDLLGRAGRFDLALKTIHEMPVEVQAQVW 505
+ G K + ++ I+ +++ Y+C LVD+ + G + + P+ W
Sbjct: 627 IGLG----KQIHAHV-IKKELQYDVYICSTLVDMYSKCGNLHDSRLMFEKAPIR-DFVTW 680
Query: 506 APLLSACMKHHNVELGEYAAK 526
++ HH +GE A K
Sbjct: 681 NAMICG-YAHHG--MGEEAIK 698
Score = 189 bits (479), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 131/500 (26%), Positives = 242/500 (48%), Gaps = 48/500 (9%)
Query: 33 FPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMP 92
F V K CA + GK+ H+H++ GF+ FV L+ +Y C + + K+ D MP
Sbjct: 52 FSFVFKECAKQRAHELGKQAHAHMIISGFRPTVFVSNCLLQLYINCGNLGYATKLFDGMP 111
Query: 93 VR-----------------------------LRSVVSWNSIISAHSRACLNDEAILVLKE 123
+R R VVSWNS++S + N E++ V E
Sbjct: 112 LRDVVSWNAMIFGYAASNDMVRASLCFEMMPTRDVVSWNSMLSGFLQTGENLESVKVFIE 171
Query: 124 MWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFG 179
M G+E +F ++ CS ++ G +H ++G + ++ ++++ MYAK
Sbjct: 172 MGRSGVEFDNKSFSVILKVCSILENYKLGTQIHGIALRMGY-DTDVVSGSALLDMYAKCK 230
Query: 180 KVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLIL 239
+++E+ ++F + + + +SW+ II G V ++ + +M+++ V ++ +++
Sbjct: 231 RLDESFTVFYAMPQKNWISWSAIIAGCVQNNFLDGGLKMFKEMQKVGVGVSQSIYASVLK 290
Query: 240 GCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFL 299
CA + +L L +H+ LKS + + + + MY KC +++ A+R+FD ++
Sbjct: 291 SCATLPDLRLGTQLHAHALKSDFVKDGIVRTATLDMYAKCNNMQDAQRLFDMSENLNLQS 350
Query: 300 WTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIV 359
+ +MI GY+Q A+ LF++L K+S+ +E +L+ L ACA + LS+G ++
Sbjct: 351 YNAMITGYSQKDNGFRALLLFRKLSKSSLGFDEISLSGALRACATVKGLSEGLQLHGLAT 410
Query: 360 LNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALN 419
+ N V + I M+ KC +++A VF+ + KD W+A+I + + + LN
Sbjct: 411 KSNFSRNICVANAFIDMYGKCEALDEACRVFDEMGRKDAVSWNAIIAAHEQNEERSKTLN 470
Query: 420 LFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKS-----MQSNFGIEPSIEHYL 474
+ M G++PD + S+L AC+ + + G+ + M SN I S
Sbjct: 471 ILVSMLR-SGMEPDEYTFGSVLKACAGDSL-NHGMEIHTTIVKLGMASNPYIGSS----- 523
Query: 475 CLVDLLGRAGRFDLALKTIH 494
LVD+ + G D A K IH
Sbjct: 524 -LVDMYSKCGMIDEAEK-IH 541
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 41/220 (18%), Positives = 89/220 (40%), Gaps = 34/220 (15%)
Query: 333 ATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFER 392
A + CA+ + GK+ +++++G V L+ ++ CG + A ++F+
Sbjct: 50 ANFSFVFKECAKQRAHELGKQAHAHMIISGFRPTVFVSNCLLQLYINCGNLGYATKLFDG 109
Query: 393 VPDKDLAVWSAMINGYAIH-------------------------------GMGDQALNLF 421
+P +D+ W+AMI GYA G +++ +F
Sbjct: 110 MPLRDVVSWNAMIFGYAASNDMVRASLCFEMMPTRDVVSWNSMLSGFLQTGENLESVKVF 169
Query: 422 YKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLG 481
+M G++ D ++ IL CS G + G + + L+D+
Sbjct: 170 IEMGR-SGVEFDNKSFSVILKVCSILENYKLGTQ-IHGIALRMGYDTDVVSGSALLDMYA 227
Query: 482 RAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELG 521
+ R D + + MP + W+ +++ C++++ ++ G
Sbjct: 228 KCKRLDESFTVFYAMP-QKNWISWSAIIAGCVQNNFLDGG 266
>gi|242085334|ref|XP_002443092.1| hypothetical protein SORBIDRAFT_08g008260 [Sorghum bicolor]
gi|241943785|gb|EES16930.1| hypothetical protein SORBIDRAFT_08g008260 [Sorghum bicolor]
Length = 655
Score = 333 bits (854), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 175/505 (34%), Positives = 273/505 (54%), Gaps = 34/505 (6%)
Query: 150 SMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNV 209
++HC +K G + + + N+++ MYA + +AR +FDE+ + +VSWTT++ GY
Sbjct: 151 AIHCVAFKRGFIGQSVLVGNALVHMYASSMSLPDARKLFDEMADRDVVSWTTLVDGYARG 210
Query: 210 GNVNEAFGL-CNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPL 268
G +EA+ + C + P+ V + Q+G L L +H +++SG L
Sbjct: 211 GLPDEAWRVFCRMVVAGGGWPNEVTLVAAASAAGQIGLLGLGRMVHQCVVESGVRMSVNL 270
Query: 269 DNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLG----------------- 311
+N LV M+ KCG + A+ +FD + K V+ WTSM+ YA+ G
Sbjct: 271 ENALVDMFGKCGCVASAKEIFDGMPIKDVYSWTSMVSAYAKCGDLENAGKLFKEIPNRNA 330
Query: 312 --------------YPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEI-EE 356
P EA+ +F ++ V P +ATL + LSACA+LG L G+ + +
Sbjct: 331 VSWSCMVAAYSQANLPEEAMRIFNDMIAAGVEPIDATLVSVLSACAQLGCLDVGRCLYDA 390
Query: 357 YIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQ 416
YIV + +E + + I MF+KCG + A +F + DK++ W+ MI +A+HG ++
Sbjct: 391 YIVSHKVELTVNLSNAFIDMFAKCGDVGAASRLFRNMEDKNVVSWNTMIVAHALHGQSEE 450
Query: 417 ALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCL 476
AL+LF K + + G+ PD + Y +LSACSHSG+V +G FK M+ +GIEP EHY C+
Sbjct: 451 ALHLFQKFKAI-GIFPDEITYIGVLSACSHSGLVSEGRYHFKEMKIVYGIEPRAEHYACM 509
Query: 477 VDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGST 536
+DLLG+ G + A + MPV W LL+AC H NVE+G+ AA L+ L+P +
Sbjct: 510 IDLLGKVGLLEEAFEVARSMPVGADEAGWGALLNACRMHGNVEIGKCAADKLVGLDPSDS 569
Query: 537 GNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSV 596
G Y+LM+ ++ S W + R +M DR + K PG S +E+DG F+A D SH S
Sbjct: 570 GIYVLMSQIYASKSKWGQVKMIRTVMRDRGVKKNPGCSSIEVDGKFHEFLAADVSHAHSE 629
Query: 597 DIRKTLKELHIKLLEAGYIAEADIV 621
DI L+ +++ GYI+ V
Sbjct: 630 DIYAALENIYLHSKLEGYISHVSCV 654
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 121/451 (26%), Positives = 202/451 (44%), Gaps = 43/451 (9%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
M+R G L+ + +L+ + ++ T +KA +S + +H K G
Sbjct: 103 MMRGFLRAGKPAHALALFRRVLRDRLPADARTIVFAVKAATTSSS--PAEAIHCVAFKRG 160
Query: 61 F-QQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAIL 119
F Q V L+ MY+ +RK+ DEM R VVSW +++ ++R L DEA
Sbjct: 161 FIGQSVLVGNALVHMYASSMSLPDARKLFDEMADR--DVVSWTTLVDGYARGGLPDEAWR 218
Query: 120 VLKEMWVLG--------LELSASTFVSV--------VSGCSFRQGISM------------ 151
V M V G L +AS + V C G+ M
Sbjct: 219 VFCRMVVAGGGWPNEVTLVAAASAAGQIGLLGLGRMVHQCVVESGVRMSVNLENALVDMF 278
Query: 152 -HC-CVYKLGLLNNEIPLAN-----SVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIG 204
C CV + + +P+ + S++S YAK G + A +F EI + VSW+ ++
Sbjct: 279 GKCGCVASAKEIFDGMPIKDVYSWTSMVSAYAKCGDLENAGKLFKEIPNRNAVSWSCMVA 338
Query: 205 GYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMH-SLLLKSGYN 263
Y EA + N M V P ++++ CAQ+G L + ++ + ++
Sbjct: 339 AYSQANLPEEAMRIFNDMIAAGVEPIDATLVSVLSACAQLGCLDVGRCLYDAYIVSHKVE 398
Query: 264 NEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRL 323
L N + M+ KCGD+ A R+F + +K+V W +MI +A G EA++LF++
Sbjct: 399 LTVNLSNAFIDMFAKCGDVGAASRLFRNMEDKNVVSWNTMIVAHALHGQSEEALHLFQKF 458
Query: 324 LKTSVRPNEATLATTLSACAELGSLSKGK-EIEEYIVLNGLESNRQVQTSLIHMFSKCGR 382
+ P+E T LSAC+ G +S+G+ +E ++ G+E + +I + K G
Sbjct: 459 KAIGIFPDEITYIGVLSACSHSGLVSEGRYHFKEMKIVYGIEPRAEHYACMIDLLGKVGL 518
Query: 383 INKAKEVFERVP-DKDLAVWSAMINGYAIHG 412
+ +A EV +P D A W A++N +HG
Sbjct: 519 LEEAFEVARSMPVGADEAGWGALLNACRMHG 549
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 143/271 (52%), Gaps = 10/271 (3%)
Query: 200 TTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLK 259
T++ G++ G A L ++ R + D + + A + A ++H + K
Sbjct: 101 ATMMRGFLRAGKPAHALALFRRVLRDRLPADARTIVFAVK--AATTSSSPAEAIHCVAFK 158
Query: 260 SGYNNEDPL-DNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVN 318
G+ + L N LV MY L AR++FD + ++ V WT+++ GYA+ G P EA
Sbjct: 159 RGFIGQSVLVGNALVHMYASSMSLPDARKLFDEMADRDVVSWTTLVDGYARGGLPDEAWR 218
Query: 319 LFKRLLKTSVR-PNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMF 377
+F R++ PNE TL SA ++G L G+ + + +V +G+ + ++ +L+ MF
Sbjct: 219 VFCRMVVAGGGWPNEVTLVAAASAAGQIGLLGLGRMVHQCVVESGVRMSVNLENALVDMF 278
Query: 378 SKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVY 437
KCG + AKE+F+ +P KD+ W++M++ YA G + A LF ++ + +AV +
Sbjct: 279 GKCGCVASAKEIFDGMPIKDVYSWTSMVSAYAKCGDLENAGKLFKEIPN-----RNAVSW 333
Query: 438 TSILSACSHSGMVDDGLSFFKSMQSNFGIEP 468
+ +++A S + + ++ + F M + G+EP
Sbjct: 334 SCMVAAYSQANLPEEAMRIFNDMIAA-GVEP 363
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 111/225 (49%), Gaps = 5/225 (2%)
Query: 296 SVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIE 355
+ ++ +M+ G+ + G P+ A+ LF+R+L+ + + T+ + A S S + I
Sbjct: 96 NAYMLATMMRGFLRAGKPAHALALFRRVLRDRLPADARTIVFAVKAATT--SSSPAEAIH 153
Query: 356 EYIVLNG-LESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMG 414
G + + V +L+HM++ + A+++F+ + D+D+ W+ +++GYA G+
Sbjct: 154 CVAFKRGFIGQSVLVGNALVHMYASSMSLPDARKLFDEMADRDVVSWTTLVDGYARGGLP 213
Query: 415 DQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYL 474
D+A +F +M G P+ V + SA G++ G + + + G+ S+
Sbjct: 214 DEAWRVFCRMVVAGGGWPNEVTLVAAASAAGQIGLLGLGRMVHQCVVES-GVRMSVNLEN 272
Query: 475 CLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVE 519
LVD+ G+ G A + MP++ W ++SA K ++E
Sbjct: 273 ALVDMFGKCGCVASAKEIFDGMPIK-DVYSWTSMVSAYAKCGDLE 316
>gi|296089484|emb|CBI39303.3| unnamed protein product [Vitis vinifera]
Length = 723
Score = 333 bits (854), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 197/628 (31%), Positives = 327/628 (52%), Gaps = 15/628 (2%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+I T G + E ++ + + + + FTF L C + G+ +H+ + G
Sbjct: 12 LISGYTQMGFYHEVMNLFKEARMSDLRLDKFTFSNALSVCGRTLDLRLGRLIHALITVSG 71
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+ LIDMY KC +R V E L SV SWNS+I+ + R NDE + +
Sbjct: 72 LGGPVLLTNSLIDMYCKCGRIDWARLVF-ESADELDSV-SWNSLIAGYVRIGSNDEMLRL 129
Query: 121 LKEMWVLGLELSASTFVSVVSGC------SFRQGISMHCCVYKLGLLNNEIPLANSVMSM 174
L +M GL L++ S + C S G +H C KLGL + ++ + +++
Sbjct: 130 LVKMLRHGLNLNSYALGSALKACGSNFSSSIECGKMLHGCAVKLGL-DLDVVVGTALLDT 188
Query: 175 YAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNV-----NEAFGLCNQMRRMSVTP 229
YAK G + +A IF + + ++V + +I G++ + + NEA L +M+ + P
Sbjct: 189 YAKIGDLEDATKIFKLMPDPNVVMYNAMIAGFLQMETMADEFANEAMYLFFEMQSRGMKP 248
Query: 230 DLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVF 289
F +++ C+ + +H+ + K +++ + N LV +Y+ G +E + F
Sbjct: 249 SEFTFSSILKACSTIEAFECGKQIHAQIFKYNLQSDEFIGNALVELYSLSGSIEDGLKCF 308
Query: 290 DAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLS 349
+ + V WTS+I G+ Q G + LF LL + +P+E T++ LSACA L ++
Sbjct: 309 HSTPKLDVVSWTSLIVGHVQNGQFEGGLTLFHELLFSGRKPDEFTISIMLSACANLAAVK 368
Query: 350 KGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYA 409
G++I Y + G+ + +Q S I M++KCG I+ A F+ + D+ WS MI+ A
Sbjct: 369 SGEQIHAYAIKTGIGNFTIIQNSQICMYAKCGDIDSANMTFKETKNPDIVSWSVMISSNA 428
Query: 410 IHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPS 469
HG +A++LF M+ G+ P+ + + +L ACSH G+V++GL +F+ M+ + GI P+
Sbjct: 429 QHGCAKEAVDLFELMKG-SGIAPNHITFLGVLVACSHGGLVEEGLRYFEIMKKDHGITPN 487
Query: 470 IEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLL 529
++H C+VDLLGRAGR A I + E +W LLSAC H + G+ A+ ++
Sbjct: 488 VKHSACIVDLLGRAGRLAEAESFIMDSGFEGDPVMWRSLLSACRVHKATDTGKRVAERVI 547
Query: 530 TLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGD 589
L P + +Y+L+ N++ AG+ A R LM DR + KEPG S +E+ V FVAGD
Sbjct: 548 ELEPEAAASYVLLYNIYNDAGIQMPATEIRNLMKDRGVKKEPGLSWIEVGNVVHSFVAGD 607
Query: 590 RSHHLSVDIRKTLKELHIKLLEAGYIAE 617
RSH S I L+E+ ++ + YI E
Sbjct: 608 RSHPNSQVIYVQLEEMLEEIKKLDYIDE 635
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 104/369 (28%), Positives = 187/369 (50%), Gaps = 13/369 (3%)
Query: 96 RSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGC----SFRQGISM 151
R+VVSWNS+IS +++ E + + KE + L L TF + +S C R G +
Sbjct: 4 RNVVSWNSLISGYTQMGFYHEVMNLFKEARMSDLRLDKFTFSNALSVCGRTLDLRLGRLI 63
Query: 152 HCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGN 211
H + G L + L NS++ MY K G+++ AR +F+ E VSW ++I GYV +G+
Sbjct: 64 HALITVSG-LGGPVLLTNSLIDMYCKCGRIDWARLVFESADELDSVSWNSLIAGYVRIGS 122
Query: 212 VNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQ--VGNLFLALSMHSLLLKSGYNNEDPLD 269
+E L +M R + + + + C ++ +H +K G + + +
Sbjct: 123 NDEMLRLLVKMLRHGLNLNSYALGSALKACGSNFSSSIECGKMLHGCAVKLGLDLDVVVG 182
Query: 270 NLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQL-----GYPSEAVNLFKRLL 324
L+ Y K GDLE A ++F + + +V ++ +MI G+ Q+ + +EA+ LF +
Sbjct: 183 TALLDTYAKIGDLEDATKIFKLMPDPNVVMYNAMIAGFLQMETMADEFANEAMYLFFEMQ 242
Query: 325 KTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRIN 384
++P+E T ++ L AC+ + + GK+I I L+S+ + +L+ ++S G I
Sbjct: 243 SRGMKPSEFTFSSILKACSTIEAFECGKQIHAQIFKYNLQSDEFIGNALVELYSLSGSIE 302
Query: 385 KAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSAC 444
+ F P D+ W+++I G+ +G + L LF+++ G KPD + +LSAC
Sbjct: 303 DGLKCFHSTPKLDVVSWTSLIVGHVQNGQFEGGLTLFHELL-FSGRKPDEFTISIMLSAC 361
Query: 445 SHSGMVDDG 453
++ V G
Sbjct: 362 ANLAAVKSG 370
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 99/341 (29%), Positives = 169/341 (49%), Gaps = 20/341 (5%)
Query: 193 ETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALS 252
+ ++VSW ++I GY +G +E L + R + D F N + C + +L L
Sbjct: 3 KRNVVSWNSLISGYTQMGFYHEVMNLFKEARMSDLRLDKFTFSNALSVCGRTLDLRLGRL 62
Query: 253 MHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGY 312
+H+L+ SG L N L+ MY KCG ++ AR VF++ E W S+I GY ++G
Sbjct: 63 IHALITVSGLGGPVLLTNSLIDMYCKCGRIDWARLVFESADELDSVSWNSLIAGYVRIGS 122
Query: 313 PSEAVNLFKRLLKTSVRPNEATLATTLSACAE--LGSLSKGKEIEEYIVLNGLESNRQVQ 370
E + L ++L+ + N L + L AC S+ GK + V GL+ + V
Sbjct: 123 NDEMLRLLVKMLRHGLNLNSYALGSALKACGSNFSSSIECGKMLHGCAVKLGLDLDVVVG 182
Query: 371 TSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGY-AIHGMGD----QALNLFYKMQ 425
T+L+ ++K G + A ++F+ +PD ++ +++AMI G+ + M D +A+ LF++MQ
Sbjct: 183 TALLDTYAKIGDLEDATKIFKLMPDPNVVMYNAMIAGFLQMETMADEFANEAMYLFFEMQ 242
Query: 426 HVEGLKPDAVVYTSILSACSHSGMVDDGLS-----FFKSMQSNFGIEPSIEHYLCLVDLL 480
G+KP ++SIL ACS + G F ++QS+ I + LV+L
Sbjct: 243 S-RGMKPSEFTFSSILKACSTIEAFECGKQIHAQIFKYNLQSDEFIGNA------LVELY 295
Query: 481 GRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELG 521
+G + LK H P ++ W L+ +++ E G
Sbjct: 296 SLSGSIEDGLKCFHSTP-KLDVVSWTSLIVGHVQNGQFEGG 335
Score = 39.3 bits (90), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 27/122 (22%), Positives = 60/122 (49%), Gaps = 3/122 (2%)
Query: 393 VPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDD 452
+P +++ W+++I+GY G + +NLF K + L+ D +++ LS C + +
Sbjct: 1 MPKRNVVSWNSLISGYTQMGFYHEVMNLF-KEARMSDLRLDKFTFSNALSVCGRTLDLRL 59
Query: 453 GLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSAC 512
G ++ + G+ + L+D+ + GR D A + + E E+ + W L++
Sbjct: 60 G-RLIHALITVSGLGGPVLLTNSLIDMYCKCGRIDWA-RLVFESADELDSVSWNSLIAGY 117
Query: 513 MK 514
++
Sbjct: 118 VR 119
>gi|356495778|ref|XP_003516750.1| PREDICTED: pentatricopeptide repeat-containing protein At5g13270,
chloroplastic-like [Glycine max]
Length = 765
Score = 333 bits (853), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 185/606 (30%), Positives = 311/606 (51%), Gaps = 9/606 (1%)
Query: 8 NGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFV 67
G+ E +M + G+ N ++ + K C + ++ DGK H+ + ++ + F+
Sbjct: 70 QGNLREVHEFIRNMDKVGISINPRSYEYLFKMCGTLGALSDGKLFHNRLQRMA-NSNKFI 128
Query: 68 QTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVL 127
++ MY C F S+ + D+ + + + SW++IISA++ DEA+ + M L
Sbjct: 129 DNCILKMYCDCKSFTSAERFFDK--IVDQDLSSWSTIISAYTEEGRIDEAVRLFLRMLDL 186
Query: 128 GLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNE 183
G+ ++S F +++ + G +H + ++G N I + + +MY K G ++
Sbjct: 187 GITPNSSIFSTLIMSFTDPSMLDLGKQIHSQLIRIGFAAN-ISIETLISNMYVKCGWLDG 245
Query: 184 ARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQ 243
A +++ + V+ T ++ GY +A L +M V D VF ++ CA
Sbjct: 246 AEVATNKMTRKNAVACTGLMVGYTKAARNRDALLLFGKMISEGVELDGFVFSIILKACAA 305
Query: 244 VGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSM 303
+G+L+ +HS +K G +E + LV Y KC E AR+ F+++ E + F W+++
Sbjct: 306 LGDLYTGKQIHSYCIKLGLESEVSVGTPLVDFYVKCARFEAARQAFESIHEPNDFSWSAL 365
Query: 304 IGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGL 363
I GY Q G A+ +FK + V N AC+ + L G +I + GL
Sbjct: 366 IAGYCQSGQFDRALEVFKAIRSKGVLLNSFIYTNIFQACSAVSDLICGAQIHADAIKKGL 425
Query: 364 ESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYK 423
+ ++++I M+SKCG+++ A + F + D W+A+I +A HG +AL LF +
Sbjct: 426 VAYLSGESAMISMYSKCGQVDYAHQAFLTIDKPDTVAWTAIICAHAYHGKAFEALRLFKE 485
Query: 424 MQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRA 483
MQ G++P+AV + +L+ACSHSG+V +G SM +G+ P+I+HY C++D+ RA
Sbjct: 486 MQG-SGVRPNAVTFIGLLNACSHSGLVKEGKKILDSMSDEYGVNPTIDHYNCMIDVYSRA 544
Query: 484 GRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMA 543
G AL+ I +P E W LL C H N+E+G AA N+ L+P + Y++M
Sbjct: 545 GLLQEALEVIRSLPFEPDVMSWKSLLGGCWSHRNLEIGMIAADNIFRLDPLDSATYVIMF 604
Query: 544 NLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLK 603
NL+ AG W EAA R +M +R L KE S + + G V FV GDR H + I LK
Sbjct: 605 NLYALAGKWDEAAQFRKMMAERNLRKEVSCSWIIVKGKVHRFVVGDRHHPQTEQIYSKLK 664
Query: 604 ELHIKL 609
EL+
Sbjct: 665 ELNFSF 670
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 116/473 (24%), Positives = 227/473 (47%), Gaps = 25/473 (5%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+I T G +E + + ML G+ NS F ++ + + + + GK++HS ++++G
Sbjct: 163 IISAYTEEGRIDEAVRLFLRMLDLGITPNSSIFSTLIMSFTDPSMLDLGKQIHSQLIRIG 222
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F + ++T + +MY KC + ++M ++ V+ ++ +++A N +A+L+
Sbjct: 223 FAANISIETLISNMYVKCGWLDGAEVATNKMT--RKNAVACTGLMVGYTKAARNRDALLL 280
Query: 121 LKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
+M G+EL F ++ C+ G +H KLG L +E+ + ++ Y
Sbjct: 281 FGKMISEGVELDGFVFSIILKACAALGDLYTGKQIHSYCIKLG-LESEVSVGTPLVDFYV 339
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K + AR F+ I E + SW+ +I GY G + A + +R V + ++ N
Sbjct: 340 KCARFEAARQAFESIHEPNDFSWSALIAGYCQSGQFDRALEVFKAIRSKGVLLNSFIYTN 399
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
+ C+ V +L +H+ +K G ++ ++SMY+KCG ++ A + F + +
Sbjct: 400 IFQACSAVSDLICGAQIHADAIKKGLVAYLSGESAMISMYSKCGQVDYAHQAFLTIDKPD 459
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEI-- 354
WT++I +A G EA+ LFK + + VRPN T L+AC+ G + +GK+I
Sbjct: 460 TVAWTAIICAHAYHGKAFEALRLFKEMQGSGVRPNAVTFIGLLNACSHSGLVKEGKKILD 519
Query: 355 ---EEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVP-DKDLAVWSAMINGYAI 410
+EY G+ +I ++S+ G + +A EV +P + D+ W +++ G
Sbjct: 520 SMSDEY----GVNPTIDHYNCMIDVYSRAGLLQEALEVIRSLPFEPDVMSWKSLLGGCWS 575
Query: 411 HG---MGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSM 460
H +G A + +++ + D+ Y + + + +G D+ F K M
Sbjct: 576 HRNLEIGMIAADNIFRLDPL-----DSATYVIMFNLYALAGKWDEAAQFRKMM 623
>gi|16905194|gb|AAL31064.1|AC090120_10 hypothetical protein [Oryza sativa Japonica Group]
gi|31432781|gb|AAP54374.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 698
Score = 333 bits (853), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 195/594 (32%), Positives = 327/594 (55%), Gaps = 11/594 (1%)
Query: 36 VLKACANINSIWDGKRVHSH-VLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVR 94
+L++C + G+ +H+ VL F+ LI MYS C+D S+ ++ MP
Sbjct: 26 LLQSCGRAGDLRRGRLLHARLVLSGAAAASTFLANHLITMYSHCADLASALRLFAAMP-- 83
Query: 95 LRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELS----ASTFVSVVSGCSFRQGIS 150
R+ VSW +++S S+ ++ +A+ M G+ + +S + + + G
Sbjct: 84 RRNAVSWTTLVSGLSQNLMHADALAAFAAMRRAGVAPTRFALSSAARAAAALGAPLPGAQ 143
Query: 151 MHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVG 210
+HC +LG + E+ +A+++ MY+K G ++EA +FD++ + V+WT +I GY G
Sbjct: 144 LHCVGVRLGF-DTELFVASNLADMYSKCGLLSEACRVFDQMPQKDAVAWTAMIDGYAKNG 202
Query: 211 NVNEAFGLCNQMRRMS-VTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLD 269
++ A M+R V D VF +++ + + +L+ S+H + K+G+ E +
Sbjct: 203 SLEAAVLSFRDMKREGLVGADQHVFCSVLSASGGLKDGWLSKSIHCCVTKAGFELEVAVR 262
Query: 270 NLLVSMYTKCGDLELARRVFDAVLEK-SVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSV 328
N L+ MY K D+E A RV +V TSMI GY + EA+ ++ L + V
Sbjct: 263 NALIDMYAKSMDVESASRVLKIDPGGWNVVSGTSMIDGYIETDCVEEALVIYVELRRQGV 322
Query: 329 RPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKE 388
PNE T ++ + CA L +G ++ ++ L + V ++L+ M+ KCG I+ + +
Sbjct: 323 EPNEFTFSSMIKGCAMQALLEQGAQLHAQVIKTDLIRDSFVGSTLVDMYGKCGLISLSMQ 382
Query: 389 VFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSG 448
+F + + W+A+IN +A HG G +A+ F +M + G++P+ + + S+L+ACSH+G
Sbjct: 383 LFNEIEYRTDIAWNAVINVFAQHGHGREAIQAFDRMIY-SGIRPNHIAFVSLLTACSHAG 441
Query: 449 MVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPL 508
+VD+GL +F SM+ GIEP EHY C++D GRAGR D A K I EMP++ A W L
Sbjct: 442 LVDEGLKYFYSMKEAHGIEPKEEHYSCIIDTYGRAGRLDEAYKFISEMPIKPNAYGWCSL 501
Query: 509 LSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLT 568
L AC + ELGE AA+NL+ L PG+TG ++ ++ ++ S G W++ R LM D R+
Sbjct: 502 LGACRMRGSKELGEVAAQNLMKLEPGNTGIHVSLSGIYASLGQWEDVKAVRKLMRDSRIK 561
Query: 569 KEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKELHIKLLEAGYIAEADIVP 622
K PG+S V+ + VF + D SH DI + L+EL ++ E GYI + +P
Sbjct: 562 KLPGFSWVDSNKKTHVFGSEDWSHPQQKDIYEKLEELTTRIKEEGYIPDTSFLP 615
Score = 108 bits (271), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 106/436 (24%), Positives = 195/436 (44%), Gaps = 18/436 (4%)
Query: 133 ASTFVSVVSGCSFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIG 192
AS S R+G +H + G LAN +++MY+ + A +F +
Sbjct: 24 ASLLQSCGRAGDLRRGRLLHARLVLSGAAAASTFLANHLITMYSHCADLASALRLFAAMP 83
Query: 193 ETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALS 252
+ VSWTT++ G +A MRR V P + A +G
Sbjct: 84 RRNAVSWTTLVSGLSQNLMHADALAAFAAMRRAGVAPTRFALSSAARAAAALGAPLPGAQ 143
Query: 253 MHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGY 312
+H + ++ G++ E + + L MY+KCG L A RVFD + +K WT+MI GYA+ G
Sbjct: 144 LHCVGVRLGFDTELFVASNLADMYSKCGLLSEACRVFDQMPQKDAVAWTAMIDGYAKNGS 203
Query: 313 PSEAVNLFKRLLKTS-VRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQT 371
AV F+ + + V ++ + LSA L K I + G E V+
Sbjct: 204 LEAAVLSFRDMKREGLVGADQHVFCSVLSASGGLKDGWLSKSIHCCVTKAGFELEVAVRN 263
Query: 372 SLIHMFSKCGRINKAKEVFERVPDK-DLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGL 430
+LI M++K + A V + P ++ ++MI+GY ++AL ++ +++ +G+
Sbjct: 264 ALIDMYAKSMDVESASRVLKIDPGGWNVVSGTSMIDGYIETDCVEEALVIYVELRR-QGV 322
Query: 431 KPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLAL 490
+P+ ++S++ C+ +++ G + I S LVD+ G+ G L++
Sbjct: 323 EPNEFTFSSMIKGCAMQALLEQGAQLHAQVIKTDLIRDSFVGST-LVDMYGKCGLISLSM 381
Query: 491 KTIHEMPVEVQAQV-WAPLLSACMKH-HNVELGEYAAKNLLTLNPGSTGNYILMANLFTS 548
+ +E +E + + W +++ +H H E + + + + G N+I +L T
Sbjct: 382 QLFNE--IEYRTDIAWNAVINVFAQHGHGREAIQAFDRMIYS---GIRPNHIAFVSLLT- 435
Query: 549 AGMWKEAATARGLMDD 564
A + GL+D+
Sbjct: 436 ------ACSHAGLVDE 445
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 109/246 (44%), Gaps = 32/246 (13%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI EE L Y + + GV N FTF ++K CA + G ++H+ V+K
Sbjct: 297 MIDGYIETDCVEEALVIYVELRRQGVEPNEFTFSSMIKGCAMQALLEQGAQLHAQVIKTD 356
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+D+FV + L+DMY KC S ++ +E + R+ ++WN++I+ ++ EAI
Sbjct: 357 LIRDSFVGSTLVDMYGKCGLISLSMQLFNE--IEYRTDIAWNAVINVFAQHGHGREAIQA 414
Query: 121 LKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGK 180
M G+ + FVS+++ CS GL++ + F
Sbjct: 415 FDRMIYSGIRPNHIAFVSLLTACS------------HAGLVDEGLKY----------FYS 452
Query: 181 VNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILG 240
+ EA I E ++ II Y G ++EA+ ++ M + P+ + +L+
Sbjct: 453 MKEAHGI-----EPKEEHYSCIIDTYGRAGRLDEAYKFISE---MPIKPNAYGWCSLLGA 504
Query: 241 CAQVGN 246
C G+
Sbjct: 505 CRMRGS 510
>gi|225460338|ref|XP_002280412.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g13880-like [Vitis vinifera]
Length = 802
Score = 333 bits (853), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 197/628 (31%), Positives = 327/628 (52%), Gaps = 15/628 (2%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+I T G + E ++ + + + + FTF L C + G+ +H+ + G
Sbjct: 91 LISGYTQMGFYHEVMNLFKEARMSDLRLDKFTFSNALSVCGRTLDLRLGRLIHALITVSG 150
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+ LIDMY KC +R V E L SV SWNS+I+ + R NDE + +
Sbjct: 151 LGGPVLLTNSLIDMYCKCGRIDWARLVF-ESADELDSV-SWNSLIAGYVRIGSNDEMLRL 208
Query: 121 LKEMWVLGLELSASTFVSVVSGC------SFRQGISMHCCVYKLGLLNNEIPLANSVMSM 174
L +M GL L++ S + C S G +H C KLGL + ++ + +++
Sbjct: 209 LVKMLRHGLNLNSYALGSALKACGSNFSSSIECGKMLHGCAVKLGL-DLDVVVGTALLDT 267
Query: 175 YAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNV-----NEAFGLCNQMRRMSVTP 229
YAK G + +A IF + + ++V + +I G++ + + NEA L +M+ + P
Sbjct: 268 YAKIGDLEDATKIFKLMPDPNVVMYNAMIAGFLQMETMADEFANEAMYLFFEMQSRGMKP 327
Query: 230 DLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVF 289
F +++ C+ + +H+ + K +++ + N LV +Y+ G +E + F
Sbjct: 328 SEFTFSSILKACSTIEAFECGKQIHAQIFKYNLQSDEFIGNALVELYSLSGSIEDGLKCF 387
Query: 290 DAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLS 349
+ + V WTS+I G+ Q G + LF LL + +P+E T++ LSACA L ++
Sbjct: 388 HSTPKLDVVSWTSLIVGHVQNGQFEGGLTLFHELLFSGRKPDEFTISIMLSACANLAAVK 447
Query: 350 KGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYA 409
G++I Y + G+ + +Q S I M++KCG I+ A F+ + D+ WS MI+ A
Sbjct: 448 SGEQIHAYAIKTGIGNFTIIQNSQICMYAKCGDIDSANMTFKETKNPDIVSWSVMISSNA 507
Query: 410 IHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPS 469
HG +A++LF M+ G+ P+ + + +L ACSH G+V++GL +F+ M+ + GI P+
Sbjct: 508 QHGCAKEAVDLFELMKG-SGIAPNHITFLGVLVACSHGGLVEEGLRYFEIMKKDHGITPN 566
Query: 470 IEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLL 529
++H C+VDLLGRAGR A I + E +W LLSAC H + G+ A+ ++
Sbjct: 567 VKHSACIVDLLGRAGRLAEAESFIMDSGFEGDPVMWRSLLSACRVHKATDTGKRVAERVI 626
Query: 530 TLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGD 589
L P + +Y+L+ N++ AG+ A R LM DR + KEPG S +E+ V FVAGD
Sbjct: 627 ELEPEAAASYVLLYNIYNDAGIQMPATEIRNLMKDRGVKKEPGLSWIEVGNVVHSFVAGD 686
Query: 590 RSHHLSVDIRKTLKELHIKLLEAGYIAE 617
RSH S I L+E+ ++ + YI E
Sbjct: 687 RSHPNSQVIYVQLEEMLEEIKKLDYIDE 714
Score = 195 bits (495), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 124/440 (28%), Positives = 223/440 (50%), Gaps = 15/440 (3%)
Query: 25 GVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSS 84
G+ +S T+ +++ S+ GK H H++K F+ F+ L+ MY KC + +
Sbjct: 14 GLPLDSVTYTKLVQCSTRTGSLIHGKLAHMHMIKTCFKPCLFLLNNLLYMYCKCGETDVA 73
Query: 85 RKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGC- 143
+K+ D MP R+VVSWNS+IS +++ E + + KE + L L TF + +S C
Sbjct: 74 KKLFDRMPK--RNVVSWNSLISGYTQMGFYHEVMNLFKEARMSDLRLDKFTFSNALSVCG 131
Query: 144 ---SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWT 200
R G +H + G L + L NS++ MY K G+++ AR +F+ E VSW
Sbjct: 132 RTLDLRLGRLIHALITVSG-LGGPVLLTNSLIDMYCKCGRIDWARLVFESADELDSVSWN 190
Query: 201 TIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQ--VGNLFLALSMHSLLL 258
++I GYV +G+ +E L +M R + + + + C ++ +H +
Sbjct: 191 SLIAGYVRIGSNDEMLRLLVKMLRHGLNLNSYALGSALKACGSNFSSSIECGKMLHGCAV 250
Query: 259 KSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQL-----GYP 313
K G + + + L+ Y K GDLE A ++F + + +V ++ +MI G+ Q+ +
Sbjct: 251 KLGLDLDVVVGTALLDTYAKIGDLEDATKIFKLMPDPNVVMYNAMIAGFLQMETMADEFA 310
Query: 314 SEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSL 373
+EA+ LF + ++P+E T ++ L AC+ + + GK+I I L+S+ + +L
Sbjct: 311 NEAMYLFFEMQSRGMKPSEFTFSSILKACSTIEAFECGKQIHAQIFKYNLQSDEFIGNAL 370
Query: 374 IHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPD 433
+ ++S G I + F P D+ W+++I G+ +G + L LF+++ G KPD
Sbjct: 371 VELYSLSGSIEDGLKCFHSTPKLDVVSWTSLIVGHVQNGQFEGGLTLFHELL-FSGRKPD 429
Query: 434 AVVYTSILSACSHSGMVDDG 453
+ +LSAC++ V G
Sbjct: 430 EFTISIMLSACANLAAVKSG 449
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 119/413 (28%), Positives = 206/413 (49%), Gaps = 25/413 (6%)
Query: 125 WVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGLLNNEIP----LANSVMSMYAKFGK 180
+ LGL L + T+ +V CS R G +H + + ++ L N+++ MY K G+
Sbjct: 11 YYLGLPLDSVTYTKLVQ-CSTRTGSLIHGKLAHMHMIKTCFKPCLFLLNNLLYMYCKCGE 69
Query: 181 VNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILG 240
+ A+ +FD + + ++VSW ++I GY +G +E L + R + D F N +
Sbjct: 70 TDVAKKLFDRMPKRNVVSWNSLISGYTQMGFYHEVMNLFKEARMSDLRLDKFTFSNALSV 129
Query: 241 CAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLW 300
C + +L L +H+L+ SG L N L+ MY KCG ++ AR VF++ E W
Sbjct: 130 CGRTLDLRLGRLIHALITVSGLGGPVLLTNSLIDMYCKCGRIDWARLVFESADELDSVSW 189
Query: 301 TSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAE--LGSLSKGKEIEEYI 358
S+I GY ++G E + L ++L+ + N L + L AC S+ GK +
Sbjct: 190 NSLIAGYVRIGSNDEMLRLLVKMLRHGLNLNSYALGSALKACGSNFSSSIECGKMLHGCA 249
Query: 359 VLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGY-AIHGMGD-- 415
V GL+ + V T+L+ ++K G + A ++F+ +PD ++ +++AMI G+ + M D
Sbjct: 250 VKLGLDLDVVVGTALLDTYAKIGDLEDATKIFKLMPDPNVVMYNAMIAGFLQMETMADEF 309
Query: 416 --QALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLS-----FFKSMQSNFGIEP 468
+A+ LF++MQ G+KP ++SIL ACS + G F ++QS+ I
Sbjct: 310 ANEAMYLFFEMQS-RGMKPSEFTFSSILKACSTIEAFECGKQIHAQIFKYNLQSDEFIGN 368
Query: 469 SIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELG 521
+ LV+L +G + LK H P ++ W L+ +++ E G
Sbjct: 369 A------LVELYSLSGSIEDGLKCFHSTP-KLDVVSWTSLIVGHVQNGQFEGG 414
>gi|224129792|ref|XP_002320672.1| predicted protein [Populus trichocarpa]
gi|222861445|gb|EEE98987.1| predicted protein [Populus trichocarpa]
Length = 720
Score = 333 bits (853), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 194/624 (31%), Positives = 331/624 (53%), Gaps = 42/624 (6%)
Query: 32 TFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRK----- 86
+F +LK+C + GK +H+ LK ++ I +YSKC+ ++
Sbjct: 10 SFRQILKSCIANKDLLTGKSLHTIYLKSLIPSSTYLSNHFILLYSKCNLLTTAHHAFNQT 69
Query: 87 --------------------------VLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+ D++P +VS+N++I+A++ A+ +
Sbjct: 70 HEPNVFSFNALIAAYAKESLIHVAHHLFDQIPQP--DLVSFNTLINAYADRGDTLSALSL 127
Query: 121 LKEMWVLGLELSASTFVSVVSGCSFRQGI--SMHCCVYKLGLLNNEIPLANSVMSMYAKF 178
EM +GL + TF V++ C G+ +H + G ++ + + NS+++ Y+K
Sbjct: 128 FGEMREMGLVMDGFTFSGVITACCNHVGLIRQLHSLAFSSGF-DSYVSVKNSLLTYYSKN 186
Query: 179 GKVNEARSIFDEIGET--SIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
G + EA +F+ +GE VSW ++I Y +A L M D+ +
Sbjct: 187 GILEEAEMVFNGMGEEVRDEVSWNSMIVAYGQHKRGLKALALYRDMVHRGFEIDMFTLAS 246
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCG-DLELARRVFDAVLEK 295
++ + V +L L H+ +K+G+N + + L+ MY KCG + +R+VF+ +
Sbjct: 247 VLTTFSCVEDLSGGLQFHAKAIKTGFNKNRHVGSGLIDMYAKCGAGMSESRKVFEEICGS 306
Query: 296 SVFLWTSMIGGYAQLGYPS-EAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEI 354
+ +W +MI GY+Q S EA+ F+++ + P++ + +SAC+ L S S+GK+
Sbjct: 307 DLVVWNTMISGYSQNKELSVEALECFRQMQRAGYWPDDCSFVCAISACSNLSSPSQGKQF 366
Query: 355 EEYIVLNGLESNR-QVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGM 413
+ + + SN+ V +L+ M+SKCG + A+++F+R+P + +++I GYA HG+
Sbjct: 367 HALAMKSEIPSNQISVNNALVTMYSKCGNLQDARKLFQRMPQHNTVTLNSIIAGYAQHGI 426
Query: 414 GDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHY 473
G ++LNLF +M + P ++ SILSAC+H+G V++G +F M+ FGIEP EHY
Sbjct: 427 GTESLNLFEQML-AASIAPTSITLVSILSACAHTGRVEEGKKYFNMMKDIFGIEPEAEHY 485
Query: 474 LCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNP 533
C++DLLGRAG+ A + I MP + WA LL AC K+ N+EL E AA L L P
Sbjct: 486 SCMIDLLGRAGKLSEAERLIDTMPFSPGSAAWAALLGACRKYGNMELAEKAANQFLQLEP 545
Query: 534 GSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHH 593
+ YI++A+++++A W+EAA R LM DR + K+PG S +E++ V VFVA D SH
Sbjct: 546 TNAVPYIMLASMYSAARKWEEAARIRKLMRDRGIRKKPGCSWIELNKRVHVFVAEDNSHP 605
Query: 594 LSVDIRKTLKELHIKLLEAGYIAE 617
+I L E+ +K+ AGY+ +
Sbjct: 606 RIKEIHMYLDEMFVKMKRAGYVPD 629
Score = 184 bits (468), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 125/437 (28%), Positives = 225/437 (51%), Gaps = 15/437 (3%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+I + G LS + M + G+ + FTF V+ AC N + +++HS G
Sbjct: 111 LINAYADRGDTLSALSLFGEMREMGLVMDGFTFSGVITACCNHVGLI--RQLHSLAFSSG 168
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F V+ L+ YSK + V + M +R VSWNS+I A+ + +A+ +
Sbjct: 169 FDSYVSVKNSLLTYYSKNGILEEAEMVFNGMGEEVRDEVSWNSMIVAYGQHKRGLKALAL 228
Query: 121 LKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
++M G E+ T SV++ S G+ H K G N + + ++ MYA
Sbjct: 229 YRDMVHRGFEIDMFTLASVLTTFSCVEDLSGGLQFHAKAIKTG-FNKNRHVGSGLIDMYA 287
Query: 177 KFGK-VNEARSIFDEIGETSIVSWTTIIGGYVNVGNVN-EAFGLCNQMRRMSVTPDLVVF 234
K G ++E+R +F+EI + +V W T+I GY ++ EA QM+R PD F
Sbjct: 288 KCGAGMSESRKVFEEICGSDLVVWNTMISGYSQNKELSVEALECFRQMQRAGYWPDDCSF 347
Query: 235 LNLILGCAQVGNLFLALSMHSLLLKSGY-NNEDPLDNLLVSMYTKCGDLELARRVFDAVL 293
+ I C+ + + H+L +KS +N+ ++N LV+MY+KCG+L+ AR++F +
Sbjct: 348 VCAISACSNLSSPSQGKQFHALAMKSEIPSNQISVNNALVTMYSKCGNLQDARKLFQRMP 407
Query: 294 EKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKE 353
+ + S+I GYAQ G +E++NLF+++L S+ P TL + LSACA G + +GK+
Sbjct: 408 QHNTVTLNSIIAGYAQHGIGTESLNLFEQMLAASIAPTSITLVSILSACAHTGRVEEGKK 467
Query: 354 IEEYIV-LNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVP-DKDLAVWSAMINGYAIH 411
+ + G+E + + +I + + G++++A+ + + +P A W+A++ +
Sbjct: 468 YFNMMKDIFGIEPEAEHYSCMIDLLGRAGKLSEAERLIDTMPFSPGSAAWAALLGACRKY 527
Query: 412 G---MGDQALNLFYKMQ 425
G + ++A N F +++
Sbjct: 528 GNMELAEKAANQFLQLE 544
Score = 128 bits (322), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 99/375 (26%), Positives = 178/375 (47%), Gaps = 20/375 (5%)
Query: 13 ETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLI 72
+ L+ Y M+ G + FT VL + + + G + H+ +K GF ++ V +GLI
Sbjct: 224 KALALYRDMVHRGFEIDMFTLASVLTTFSCVEDLSGGLQFHAKAIKTGFNKNRHVGSGLI 283
Query: 73 DMYSKCSDFVS-SRKVLDEMPVRLRSVVSWNSIISAHSR-ACLNDEAILVLKEMWVLGLE 130
DMY+KC +S SRKV +E + +V WN++IS +S+ L+ EA+ ++M G
Sbjct: 284 DMYAKCGAGMSESRKVFEE--ICGSDLVVWNTMISGYSQNKELSVEALECFRQMQRAGYW 341
Query: 131 LSASTFVSVVSGCSF----RQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARS 186
+FV +S CS QG H K + +N+I + N++++MY+K G + +AR
Sbjct: 342 PDDCSFVCAISACSNLSSPSQGKQFHALAMKSEIPSNQISVNNALVTMYSKCGNLQDARK 401
Query: 187 IFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGN 246
+F + + + V+ +II GY G E+ L QM S+ P + ++++ CA G
Sbjct: 402 LFQRMPQHNTVTLNSIIAGYAQHGIGTESLNLFEQMLAASIAPTSITLVSILSACAHTGR 461
Query: 247 LFLALSMHSLLLK-SGYNNEDPLDNLLVSMYTKCGDLELARRVFDAV-LEKSVFLWTSMI 304
+ +++ G E + ++ + + G L A R+ D + W +++
Sbjct: 462 VEEGKKYFNMMKDIFGIEPEAEHYSCMIDLLGRAGKLSEAERLIDTMPFSPGSAAWAALL 521
Query: 305 GG---YAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSA------CAELGSLSKGKEIE 355
G Y + +A N F +L T+ P LA+ SA A + L + + I
Sbjct: 522 GACRKYGNMELAEKAANQFLQLEPTNAVPY-IMLASMYSAARKWEEAARIRKLMRDRGIR 580
Query: 356 EYIVLNGLESNRQVQ 370
+ + +E N++V
Sbjct: 581 KKPGCSWIELNKRVH 595
>gi|356536685|ref|XP_003536866.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g71490-like [Glycine max]
Length = 723
Score = 333 bits (853), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 197/661 (29%), Positives = 336/661 (50%), Gaps = 45/661 (6%)
Query: 2 IRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPL--VLKACANINSIWDGKRVHSHVLKV 59
+++ +G T+ + + P+ +L AC + S+ GK++H+ V+ +
Sbjct: 51 LKDFVTHGHLTNAFKTFFQIQHHAASSHLLLHPIGSLLLACTHFKSLSQGKQLHAQVISL 110
Query: 60 GFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAIL 119
G Q+ + + L++ Y+ + V ++ V + + WN +ISA+ R EA+
Sbjct: 111 GLDQNPILVSRLVNFYTNVNLLVDAQFVTES--SNTLDPLHWNLLISAYVRNGFFVEALC 168
Query: 120 VLKEMWVLGLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMY 175
V K M +E T+ SV+ C F G+ +H + + + + + N+++SMY
Sbjct: 169 VYKNMLNKKIEPDEYTYPSVLKACGESLDFNSGLEVHRSI-EASSMEWSLFVHNALVSMY 227
Query: 176 AKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFL 235
+FGK+ AR +FD + VSW TII Y + G EAF L M+ V +++++
Sbjct: 228 GRFGKLEIARHLFDNMPRRDSVSWNTIISCYASRGIWKEAFQLFGSMQEEGVEMNVIIWN 287
Query: 236 NLILGCAQVGNLFLALSM----------------------------------HSLLLKSG 261
+ GC GN AL + H +++
Sbjct: 288 TIAGGCLHSGNFRGALQLISQMRTSIHLDAIAMVVGLNACSHIGAIKLGKEIHGHAVRTC 347
Query: 262 YNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFK 321
++ D + N L++MY++C DL A +F EK + W +M+ GYA + E LF+
Sbjct: 348 FDVFDNVKNALITMYSRCRDLGHAFILFHRTEEKGLITWNAMLSGYAHMDRYEEVTFLFR 407
Query: 322 RLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNG-LESNRQVQTSLIHMFSKC 380
+L+ + PN T+A+ L CA + +L GKE YI+ + E + +L+ M+S+
Sbjct: 408 EMLQEGMEPNYVTIASVLPLCARIANLQHGKEFHCYIMKHKQFEEYLLLWNALVDMYSRS 467
Query: 381 GRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSI 440
GR+ +A++VF+ + +D +++MI GY + G G+ L LF +M +E +KPD V ++
Sbjct: 468 GRVLEARKVFDSLTKRDEVTYTSMILGYGMKGEGETTLKLFEEMCKLE-IKPDHVTMVAV 526
Query: 441 LSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEV 500
L+ACSHSG+V G FK M GI P +EHY C+ DL GRAG + A + I MP +
Sbjct: 527 LTACSHSGLVAQGQVLFKRMIDVHGIVPRLEHYACMADLFGRAGLLNKAKEFITGMPYKP 586
Query: 501 QAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARG 560
+ +WA LL AC H N E+GE+AA LL + P +G Y+L+AN++ +AG W++ A R
Sbjct: 587 TSAMWATLLGACRIHGNTEMGEWAAGKLLEMKPDHSGYYVLIANMYAAAGSWRKLAEVRT 646
Query: 561 LMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKELHIKLLEAGYIAEADI 620
M + + K PG + V++ F+ GD S+ + +I + L+ + +AGY+ ++
Sbjct: 647 YMRNLGVRKAPGCAWVDVGSEFSPFLVGDSSNPHASEIYPLMDGLNELMKDAGYVRSEEL 706
Query: 621 V 621
V
Sbjct: 707 V 707
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 124/485 (25%), Positives = 218/485 (44%), Gaps = 51/485 (10%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+I NG F E L Y +ML + + +T+P VLKAC G VH +
Sbjct: 153 LISAYVRNGFFVEALCVYKNMLNKKIEPDEYTYPSVLKACGESLDFNSGLEVHRSIEASS 212
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+ FV L+ MY + +R + D MP R VSWN+IIS ++ + EA +
Sbjct: 213 MEWSLFVHNALVSMYGRFGKLEIARHLFDNMP--RRDSVSWNTIISCYASRGIWKEAFQL 270
Query: 121 LKEMWVLGLELSASTFVSVVSGC--------------SFRQGISMHCCVYKLGL------ 160
M G+E++ + ++ GC R I + +GL
Sbjct: 271 FGSMQEEGVEMNVIIWNTIAGGCLHSGNFRGALQLISQMRTSIHLDAIAMVVGLNACSHI 330
Query: 161 ----LNNEIP-------------LANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTII 203
L EI + N++++MY++ + A +F E +++W ++
Sbjct: 331 GAIKLGKEIHGHAVRTCFDVFDNVKNALITMYSRCRDLGHAFILFHRTEEKGLITWNAML 390
Query: 204 GGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYN 263
GY ++ E L +M + + P+ V +++ CA++ NL H ++K
Sbjct: 391 SGYAHMDRYEEVTFLFREMLQEGMEPNYVTIASVLPLCARIANLQHGKEFHCYIMKHKQF 450
Query: 264 NEDPLD-NLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKR 322
E L N LV MY++ G + AR+VFD++ ++ +TSMI GY G + LF+
Sbjct: 451 EEYLLLWNALVDMYSRSGRVLEARKVFDSLTKRDEVTYTSMILGYGMKGEGETTLKLFEE 510
Query: 323 LLKTSVRPNEATLATTLSACAELGSLSKGKEI-EEYIVLNGLESNRQVQTSLIHMFSKCG 381
+ K ++P+ T+ L+AC+ G +++G+ + + I ++G+ + + +F + G
Sbjct: 511 MCKLEIKPDHVTMVAVLTACSHSGLVAQGQVLFKRMIDVHGIVPRLEHYACMADLFGRAG 570
Query: 382 RINKAKEVFERVPDKDL-AVWSAMINGYAIHG---MGDQALNLFYKMQHVEGLKPDAVVY 437
+NKAKE +P K A+W+ ++ IHG MG+ A +M KPD Y
Sbjct: 571 LLNKAKEFITGMPYKPTSAMWATLLGACRIHGNTEMGEWAAGKLLEM------KPDHSGY 624
Query: 438 TSILS 442
+++
Sbjct: 625 YVLIA 629
>gi|356502497|ref|XP_003520055.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Glycine max]
Length = 852
Score = 332 bits (852), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 189/616 (30%), Positives = 320/616 (51%), Gaps = 49/616 (7%)
Query: 9 GSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQ 68
G E + M G + +T +L+ C+ + I G+ +H +V+K GF+ + +V
Sbjct: 191 GRQAEAFDLFKRMRLEGQKPSQYTLGSILRGCSALGLIQKGEMIHGYVVKNGFESNVYVV 250
Query: 69 TGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLG 128
GL+DMY+KC + + + + V W ++++ +++ + +AI + M G
Sbjct: 251 AGLVDMYAKCRHISEAEILFKGLAFNKGNHVLWTAMVTGYAQNGDDHKAIEFFRYMHTEG 310
Query: 129 LELSASTFVSVVSGCSFRQGISMHC-------CVYKLGLLNNEIPLANSVMSMYAKFGKV 181
+E + TF S+++ CS +S HC C+ + G N + ++++ MYAK G +
Sbjct: 311 VESNQFTFPSILTACS---SVSAHCFGEQVHGCIVRNGFGCNAY-VQSALVDMYAKCGDL 366
Query: 182 NEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGC 241
A+ + + + + +VSW ++I G V G EA L +M ++ D F + +L C
Sbjct: 367 GSAKRVLENMEDDDVVSWNSMIVGCVRHGFEEEAILLFKKMHARNMKIDHYTFPS-VLNC 425
Query: 242 AQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWT 301
VG + S+H L++K+G+ N + N LV MY K DL A VF+ + EK V WT
Sbjct: 426 CIVGRI-DGKSVHCLVIKTGFENYKLVSNALVDMYAKTEDLNCAYAVFEKMFEKDVISWT 484
Query: 302 SMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLN 361
S++ GY Q G E++ F + + V P++ +A+ LSACAEL L GK++ +
Sbjct: 485 SLVTGYTQNGSHEESLKTFCDMRISGVSPDQFIVASILSACAELTLLEFGKQVHSDFIKL 544
Query: 362 GLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLF 421
GL S+ V SL+ M++KCG ++ A +F + +D+ W+A+I GY
Sbjct: 545 GLRSSLSVNNSLVTMYAKCGCLDDADAIFVSMHVRDVITWTALIVGY------------- 591
Query: 422 YKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLG 481
+ +G D L +F+ M+ +GIEP EHY C++DL G
Sbjct: 592 -----------------------ARNGKGRDSLKYFQQMKKIYGIEPGPEHYACMIDLFG 628
Query: 482 RAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYIL 541
R G+ D A + +++M V+ A VW LL+AC H N+ELGE AA NL L P + Y++
Sbjct: 629 RLGKLDEAKEILNQMDVKPDATVWKALLAACRVHGNLELGERAATNLFELEPMNAMPYVM 688
Query: 542 MANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKT 601
++N++ +A W +AA R LM + +TKEPG S +E++ + F++ DR H +I
Sbjct: 689 LSNMYLAARKWDDAAKIRRLMKSKGITKEPGCSWIEMNSRLHTFISEDRGHPREAEIYSK 748
Query: 602 LKELHIKLLEAGYIAE 617
+ E+ ++ E GY+ +
Sbjct: 749 IDEIIRRIKEVGYVPD 764
Score = 208 bits (530), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 117/357 (32%), Positives = 202/357 (56%), Gaps = 6/357 (1%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
M+ NG + + + M GV N FTFP +L AC+++++ G++VH +++ G
Sbjct: 286 MVTGYAQNGDDHKAIEFFRYMHTEGVESNQFTFPSILTACSSVSAHCFGEQVHGCIVRNG 345
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F +A+VQ+ L+DMY+KC D S+++VL+ M VVSWNS+I R +EAIL+
Sbjct: 346 FGCNAYVQSALVDMYAKCGDLGSAKRVLENMED--DDVVSWNSMIVGCVRHGFEEEAILL 403
Query: 121 LKEMWVLGLELSASTFVSVVSGCSFRQ--GISMHCCVYKLGLLNNEIPLANSVMSMYAKF 178
K+M +++ TF SV++ C + G S+HC V K G N ++ ++N+++ MYAK
Sbjct: 404 FKKMHARNMKIDHYTFPSVLNCCIVGRIDGKSVHCLVIKTGFENYKL-VSNALVDMYAKT 462
Query: 179 GKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLI 238
+N A ++F+++ E ++SWT+++ GY G+ E+ MR V+PD + +++
Sbjct: 463 EDLNCAYAVFEKMFEKDVISWTSLVTGYTQNGSHEESLKTFCDMRISGVSPDQFIVASIL 522
Query: 239 LGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVF 298
CA++ L +HS +K G + ++N LV+MY KCG L+ A +F ++ + V
Sbjct: 523 SACAELTLLEFGKQVHSDFIKLGLRSSLSVNNSLVTMYAKCGCLDDADAIFVSMHVRDVI 582
Query: 299 LWTSMIGGYAQLGYPSEAVNLFKRLLKT-SVRPNEATLATTLSACAELGSLSKGKEI 354
WT++I GYA+ G +++ F+++ K + P A + LG L + KEI
Sbjct: 583 TWTALIVGYARNGKGRDSLKYFQQMKKIYGIEPGPEHYACMIDLFGRLGKLDEAKEI 639
Score = 156 bits (394), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 90/278 (32%), Positives = 152/278 (54%), Gaps = 3/278 (1%)
Query: 169 NSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVT 228
N+++S YA G++ EAR +F+ S ++W+++I GY G EAF L +MR
Sbjct: 150 NTMVSGYANVGRLVEARELFNGFSSRSSITWSSLISGYCRFGRQAEAFDLFKRMRLEGQK 209
Query: 229 PDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRV 288
P +++ GC+ +G + +H ++K+G+ + + LV MY KC + A +
Sbjct: 210 PSQYTLGSILRGCSALGLIQKGEMIHGYVVKNGFESNVYVVAGLVDMYAKCRHISEAEIL 269
Query: 289 FD--AVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELG 346
F A + + LWT+M+ GYAQ G +A+ F+ + V N+ T + L+AC+ +
Sbjct: 270 FKGLAFNKGNHVLWTAMVTGYAQNGDDHKAIEFFRYMHTEGVESNQFTFPSILTACSSVS 329
Query: 347 SLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMIN 406
+ G+++ IV NG N VQ++L+ M++KCG + AK V E + D D+ W++MI
Sbjct: 330 AHCFGEQVHGCIVRNGFGCNAYVQSALVDMYAKCGDLGSAKRVLENMEDDDVVSWNSMIV 389
Query: 407 GYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSAC 444
G HG ++A+ LF KM H +K D + S+L+ C
Sbjct: 390 GCVRHGFEEEAILLFKKM-HARNMKIDHYTFPSVLNCC 426
Score = 123 bits (308), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 78/249 (31%), Positives = 131/249 (52%), Gaps = 7/249 (2%)
Query: 270 NLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVR 329
N +VS Y G L AR +F+ +S W+S+I GY + G +EA +LFKR+ +
Sbjct: 150 NTMVSGYANVGRLVEARELFNGFSSRSSITWSSLISGYCRFGRQAEAFDLFKRMRLEGQK 209
Query: 330 PNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEV 389
P++ TL + L C+ LG + KG+ I Y+V NG ESN V L+ M++KC I++A+ +
Sbjct: 210 PSQYTLGSILRGCSALGLIQKGEMIHGYVVKNGFESNVYVVAGLVDMYAKCRHISEAEIL 269
Query: 390 FERVP--DKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHS 447
F+ + + +W+AM+ GYA +G +A+ F++ H EG++ + + SIL+ACS
Sbjct: 270 FKGLAFNKGNHVLWTAMVTGYAQNGDDHKAIE-FFRYMHTEGVESNQFTFPSILTACSSV 328
Query: 448 GMVDDGLSFFKSMQSN-FGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWA 506
G + N FG ++ LVD+ + G A + + M + W
Sbjct: 329 SAHCFGEQVHGCIVRNGFGCNAYVQS--ALVDMYAKCGDLGSAKRVLENME-DDDVVSWN 385
Query: 507 PLLSACMKH 515
++ C++H
Sbjct: 386 SMIVGCVRH 394
>gi|15233050|ref|NP_191676.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
gi|6850884|emb|CAB71047.1| putative protein [Arabidopsis thaliana]
gi|332646643|gb|AEE80164.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
Length = 783
Score = 332 bits (852), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 193/623 (30%), Positives = 326/623 (52%), Gaps = 45/623 (7%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+I +GS E + + M G+ N +T VL+ C ++ + G+++H H +K G
Sbjct: 96 LISGYCKSGSKVEAFNLFWEMQSDGIKPNEYTLGSVLRMCTSLVLLLRGEQIHGHTIKTG 155
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F D V GL+ MY++C + + + M ++ V+W S+++ +S+ +AI
Sbjct: 156 FDLDVNVVNGLLAMYAQCKRISEAEYLFETMEGE-KNNVTWTSMLTGYSQNGFAFKAIEC 214
Query: 121 LKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
+++ G + + TF SV++ C+ R G+ +HCC+ K G N I + ++++ MYA
Sbjct: 215 FRDLRREGNQSNQYTFPSVLTACASVSACRVGVQVHCCIVKSGFKTN-IYVQSALIDMYA 273
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K ++ AR++ + + +VSW ++I G V G + EA + +M + D +
Sbjct: 274 KCREMESARALLEGMEVDDVVSWNSMIVGCVRQGLIGEALSMFGRMHERDMKIDDFTIPS 333
Query: 237 LILGCAQVGN--LFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLE 294
IL C + + +A S H L++K+GY ++N LV MY K G ++ A +VF+ ++E
Sbjct: 334 -ILNCFALSRTEMKIASSAHCLIVKTGYATYKLVNNALVDMYAKRGIMDSALKVFEGMIE 392
Query: 295 KSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEI 354
K V WT+++ G G EA+ LF + + P++ A+ LSA AEL L G+++
Sbjct: 393 KDVISWTALVTGNTHNGSYDEALKLFCNMRVGGITPDKIVTASVLSASAELTLLEFGQQV 452
Query: 355 EEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMG 414
+ +G S+ V SL+ M++KCG + A +F + +DL W+ +I GYA
Sbjct: 453 HGNYIKSGFPSSLSVNNSLVTMYTKCGSLEDANVIFNSMEIRDLITWTCLIVGYA----- 507
Query: 415 DQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYL 474
+G+++D +F SM++ +GI P EHY
Sbjct: 508 -------------------------------KNGLLEDAQRYFDSMRTVYGITPGPEHYA 536
Query: 475 CLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPG 534
C++DL GR+G F + +H+M VE A VW +L+A KH N+E GE AAK L+ L P
Sbjct: 537 CMIDLFGRSGDFVKVEQLLHQMEVEPDATVWKAILAASRKHGNIENGERAAKTLMELEPN 596
Query: 535 STGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHL 594
+ Y+ ++N++++AG EAA R LM R ++KEPG S VE G V F++ DR H
Sbjct: 597 NAVPYVQLSNMYSAAGRQDEAANVRRLMKSRNISKEPGCSWVEEKGKVHSFMSEDRRHPR 656
Query: 595 SVDIRKTLKELHIKLLEAGYIAE 617
V+I + E+ + + EAGY A+
Sbjct: 657 MVEIYSKVDEMMLLIKEAGYFAD 679
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 93/356 (26%), Positives = 177/356 (49%), Gaps = 27/356 (7%)
Query: 169 NSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVT 228
N+++ Y+ ++++A +F + +SW +I GY G+ EAF L +M+ +
Sbjct: 63 NTMIVAYSNSRRLSDAEKLFRSNPVKNTISWNALISGYCKSGSKVEAFNLFWEMQSDGIK 122
Query: 229 PDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRV 288
P+ +++ C + L +H +K+G++ + + N L++MY +C + A +
Sbjct: 123 PNEYTLGSVLRMCTSLVLLLRGEQIHGHTIKTGFDLDVNVVNGLLAMYAQCKRISEAEYL 182
Query: 289 FDAVL-EKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGS 347
F+ + EK+ WTSM+ GY+Q G+ +A+ F+ L + + N+ T + L+ACA + +
Sbjct: 183 FETMEGEKNNVTWTSMLTGYSQNGFAFKAIECFRDLRREGNQSNQYTFPSVLTACASVSA 242
Query: 348 LSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMING 407
G ++ IV +G ++N VQ++LI M++KC + A+ + E + D+ W++MI G
Sbjct: 243 CRVGVQVHCCIVKSGFKTNIYVQSALIDMYAKCREMESARALLEGMEVDDVVSWNSMIVG 302
Query: 408 YAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSIL------------SACSHSGMVDDGLS 455
G+ +AL++F +M H +K D SIL ++ +H +V G +
Sbjct: 303 CVRQGLIGEALSMFGRM-HERDMKIDDFTIPSILNCFALSRTEMKIASSAHCLIVKTGYA 361
Query: 456 FFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSA 511
+K + + LVD+ + G D ALK M +E W L++
Sbjct: 362 TYKLVNN------------ALVDMYAKRGIMDSALKVFEGM-IEKDVISWTALVTG 404
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 123/247 (49%), Gaps = 4/247 (1%)
Query: 270 NLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVR 329
N ++ Y+ L A ++F + K+ W ++I GY + G EA NLF + ++
Sbjct: 63 NTMIVAYSNSRRLSDAEKLFRSNPVKNTISWNALISGYCKSGSKVEAFNLFWEMQSDGIK 122
Query: 330 PNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEV 389
PNE TL + L C L L +G++I + + G + + V L+ M+++C RI++A+ +
Sbjct: 123 PNEYTLGSVLRMCTSLVLLLRGEQIHGHTIKTGFDLDVNVVNGLLAMYAQCKRISEAEYL 182
Query: 390 FERVP-DKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSG 448
FE + +K+ W++M+ GY+ +G +A+ F ++ EG + + + S+L+AC+
Sbjct: 183 FETMEGEKNNVTWTSMLTGYSQNGFAFKAIECFRDLRR-EGNQSNQYTFPSVLTACASVS 241
Query: 449 MVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPL 508
G+ + + G + +I L+D+ + + A + M V+ W +
Sbjct: 242 ACRVGVQVHCCIVKS-GFKTNIYVQSALIDMYAKCREMESARALLEGMEVD-DVVSWNSM 299
Query: 509 LSACMKH 515
+ C++
Sbjct: 300 IVGCVRQ 306
>gi|255558188|ref|XP_002520121.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540613|gb|EEF42176.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 589
Score = 332 bits (852), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 184/575 (32%), Positives = 317/575 (55%), Gaps = 12/575 (2%)
Query: 36 VLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRL 95
+L CA I + G +H+ LK G D V +I++YSKC + + +R++ DEM R
Sbjct: 9 LLHHCAKIKAFLHGLSLHAAALKTGMLSDIIVSNHVINLYSKCGNVIFARRMFDEMSDR- 67
Query: 96 RSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCS----FRQGISM 151
++VSW++IIS + + A+ + +M ++ E F SV+S C+ QG+ +
Sbjct: 68 -NLVSWSAIISGYDQTGQPLLALNLFSQMRIVPNEY---VFASVISACASLTALSQGLQV 123
Query: 152 HCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGN 211
H KLG ++ ++N+++SMY K G +A + + + E + VS+ +I G+V
Sbjct: 124 HAQSLKLGCVSVSF-VSNALISMYMKCGLCTDALLVHNVMSEPNAVSYNALIAGFVENQQ 182
Query: 212 VNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNL 271
+ MR+ PD F L+ C + + + +H ++K + + N+
Sbjct: 183 PEKGIEAFKVMRQKGFAPDRFTFSGLLGICTSYDDFWRGMQLHCQMIKLNLEDSAFIGNV 242
Query: 272 LVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTS-VRP 330
+++MY+K +E A +VF + EK + W +++ A+ +F+ +L V+P
Sbjct: 243 IITMYSKFNLIEEAEKVFGLIKEKDLISWNTLVTACCFCKDHERALRVFRDMLDVCFVKP 302
Query: 331 NEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVF 390
++ T A L+ACA L S+ GK+I +++ + V +L++M++KCG I + +VF
Sbjct: 303 DDFTFAGVLAACAGLASIRHGKQIHGHLIRTRQYQDVGVSNALVNMYAKCGSIKNSYDVF 362
Query: 391 ERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMV 450
R D++L W+ +I + HG+G +AL F KM+ V G+ PD+V + +L+AC+H+G+V
Sbjct: 363 RRTSDRNLVSWNTIIAAFGNHGLGARALEHFEKMKTV-GIHPDSVTFVGLLTACNHAGLV 421
Query: 451 DDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLS 510
++G +F SM+ +GI P+IEH+ CL+DLLGRAGR A + + ++P + LLS
Sbjct: 422 EEGQVYFNSMEEAYGIFPNIEHFSCLIDLLGRAGRLQEAEEYMEKLPFGHDPIILGSLLS 481
Query: 511 ACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKE 570
AC H ++ +GE+ A LL L P +T Y+L++NL+ S MW A A ++ L KE
Sbjct: 482 ACRLHGDMVIGEHLATQLLKLQPVTTSPYVLLSNLYASDEMWGGVAEAWKMLKYSGLKKE 541
Query: 571 PGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKEL 605
PG S +++ G + F GD SH +I+ T+K L
Sbjct: 542 PGHSLIDVMGMFEKFTMGDLSHSRIEEIKDTIKML 576
Score = 155 bits (391), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 121/496 (24%), Positives = 232/496 (46%), Gaps = 36/496 (7%)
Query: 29 NSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSK---CSDFVSSR 85
N + F V+ ACA++ ++ G +VH+ LK+G +FV LI MY K C+D +
Sbjct: 100 NEYVFASVISACASLTALSQGLQVHAQSLKLGCVSVSFVSNALISMYMKCGLCTDALLVH 159
Query: 86 KVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCS- 144
V+ E + VS+N++I+ ++ I K M G TF ++ C+
Sbjct: 160 NVMSE-----PNAVSYNALIAGFVENQQPEKGIEAFKVMRQKGFAPDRFTFSGLLGICTS 214
Query: 145 ---FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTT 201
F +G+ +HC + KL L ++ + N +++MY+KF + EA +F I E ++SW T
Sbjct: 215 YDDFWRGMQLHCQMIKLNLEDSAF-IGNVIITMYSKFNLIEEAEKVFGLIKEKDLISWNT 273
Query: 202 IIGGYVNVGNVNEAFGLCNQMRRMS-VTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKS 260
++ + A + M + V PD F ++ CA + ++ +H L+++
Sbjct: 274 LVTACCFCKDHERALRVFRDMLDVCFVKPDDFTFAGVLAACAGLASIRHGKQIHGHLIRT 333
Query: 261 GYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLF 320
+ + N LV+MY KCG ++ + VF ++++ W ++I + G + A+ F
Sbjct: 334 RQYQDVGVSNALVNMYAKCGSIKNSYDVFRRTSDRNLVSWNTIIAAFGNHGLGARALEHF 393
Query: 321 KRLLKTSVRPNEATLATTLSACAELGSLSKGK----EIEEYIVLNGLESNRQVQTSLIHM 376
+++ + P+ T L+AC G + +G+ +EE G+ N + + LI +
Sbjct: 394 EKMKTVGIHPDSVTFVGLLTACNHAGLVEEGQVYFNSMEEAY---GIFPNIEHFSCLIDL 450
Query: 377 FSKCGRINKAKEVFERVP-DKDLAVWSAMINGYAIHG---MGDQALNLFYKMQHVEGLKP 432
+ GR+ +A+E E++P D + ++++ +HG +G+ K+Q V
Sbjct: 451 LGRAGRLQEAEEYMEKLPFGHDPIILGSLLSACRLHGDMVIGEHLATQLLKLQPVT--TS 508
Query: 433 DAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRF---DLA 489
V+ +++ ++ G V + K S EP L+D++G +F DL+
Sbjct: 509 PYVLLSNLYASDEMWGGVAEAWKMLK--YSGLKKEPGHS----LIDVMGMFEKFTMGDLS 562
Query: 490 LKTIHEMPVEVQAQVW 505
I E+ ++ W
Sbjct: 563 HSRIEEIKDTIKMLNW 578
Score = 118 bits (296), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 126/226 (55%), Gaps = 10/226 (4%)
Query: 236 NLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEK 295
+L+ CA++ LS+H+ LK+G ++ + N ++++Y+KCG++ ARR+FD + ++
Sbjct: 8 SLLHHCAKIKAFLHGLSLHAAALKTGMLSDIIVSNHVINLYSKCGNVIFARRMFDEMSDR 67
Query: 296 SVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIE 355
++ W+++I GY Q G P A+NLF ++ + PNE A+ +SACA L +LS+G ++
Sbjct: 68 NLVSWSAIISGYDQTGQPLLALNLFSQM---RIVPNEYVFASVISACASLTALSQGLQVH 124
Query: 356 EYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGD 415
+ G S V +LI M+ KCG A V + + + ++A+I G+ + +
Sbjct: 125 AQSLKLGCVSVSFVSNALISMYMKCGLCTDALLVHNVMSEPNAVSYNALIAGFVENQQPE 184
Query: 416 QALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQ 461
+ + F M+ +G PD ++ +L C+ DD F++ MQ
Sbjct: 185 KGIEAFKVMRQ-KGFAPDRFTFSGLLGICTS---YDD---FWRGMQ 223
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 124/250 (49%), Gaps = 8/250 (3%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+I N E+ + + M Q G + FTF +L C + + W G ++H ++K+
Sbjct: 173 LIAGFVENQQPEKGIEAFKVMRQKGFAPDRFTFSGLLGICTSYDDFWRGMQLHCQMIKLN 232
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+ AF+ +I MYSK + + KV ++ + ++SWN++++A ++ A+ V
Sbjct: 233 LEDSAFIGNVIITMYSKFNLIEEAEKVFG--LIKEKDLISWNTLVTACCFCKDHERALRV 290
Query: 121 LKEMW-VLGLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMY 175
++M V ++ TF V++ C S R G +H + + ++ ++N++++MY
Sbjct: 291 FRDMLDVCFVKPDDFTFAGVLAACAGLASIRHGKQIHGHLIRTRQY-QDVGVSNALVNMY 349
Query: 176 AKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFL 235
AK G + + +F + ++VSW TII + N G A +M+ + + PD V F+
Sbjct: 350 AKCGSIKNSYDVFRRTSDRNLVSWNTIIAAFGNHGLGARALEHFEKMKTVGIHPDSVTFV 409
Query: 236 NLILGCAQVG 245
L+ C G
Sbjct: 410 GLLTACNHAG 419
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 107/249 (42%), Gaps = 33/249 (13%)
Query: 12 EETLSTYSSMLQTG-VHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTG 70
E L + ML V + FTF VL ACA + SI GK++H H+++ QD V
Sbjct: 285 ERALRVFRDMLDVCFVKPDDFTFAGVLAACAGLASIRHGKQIHGHLIRTRQYQDVGVSNA 344
Query: 71 LIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLE 130
L++MY+KC +S V R++VSWN+II+A L A+ ++M +G+
Sbjct: 345 LVNMYAKCGSIKNSYDVFRR--TSDRNLVSWNTIIAAFGNHGLGARALEHFEKMKTVGIH 402
Query: 131 LSASTFVSVVSGCSFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDE 190
+ TFV +++ C+ GL+ NS+ Y F + + D
Sbjct: 403 PDSVTFVGLLTACN------------HAGLVEEGQVYFNSMEEAYGIFPNIEHFSCLIDL 450
Query: 191 IGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLA 250
+G G + EA M ++ D ++ +L+ C G++ +
Sbjct: 451 LGRA---------------GRLQEAE---EYMEKLPFGHDPIILGSLLSACRLHGDMVIG 492
Query: 251 LSMHSLLLK 259
+ + LLK
Sbjct: 493 EHLATQLLK 501
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 68/121 (56%), Gaps = 4/121 (3%)
Query: 334 TLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERV 393
+ + L CA++ + G + + G+ S+ V +I+++SKCG + A+ +F+ +
Sbjct: 5 AIGSLLHHCAKIKAFLHGLSLHAAALKTGMLSDIIVSNHVINLYSKCGNVIFARRMFDEM 64
Query: 394 PDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDG 453
D++L WSA+I+GY G ALNLF +M+ V P+ V+ S++SAC+ + G
Sbjct: 65 SDRNLVSWSAIISGYDQTGQPLLALNLFSQMRIV----PNEYVFASVISACASLTALSQG 120
Query: 454 L 454
L
Sbjct: 121 L 121
>gi|115444451|ref|NP_001046005.1| Os02g0167200 [Oryza sativa Japonica Group]
gi|113535536|dbj|BAF07919.1| Os02g0167200, partial [Oryza sativa Japonica Group]
Length = 526
Score = 332 bits (852), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 172/532 (32%), Positives = 296/532 (55%), Gaps = 35/532 (6%)
Query: 58 KVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEA 117
+ GF D V LIDMY+KC + + KV + +P ++VSWN +I+ + +A
Sbjct: 1 RKGFGSDQHVGNSLIDMYTKCVEMDEAVKVFESLPSV--TIVSWNILITGFGQEGSCAKA 58
Query: 118 ILVLKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAK 177
+ VL M G E + T+ ++++ C K
Sbjct: 59 VEVLSLMQEAGFEPNEVTYSNLLASC--------------------------------IK 86
Query: 178 FGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNL 237
V+ AR++FD+I S+ +W T++ GY + L +M+ +V PD +
Sbjct: 87 ARDVHSARAMFDKISRPSVTTWNTLLSGYCQEEQHQDTIELFRRMQHQNVQPDRTTLAVI 146
Query: 238 ILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSV 297
+ C+++G L +HS ++ +N+ + + LV MY+KCG + +AR +F+ + E+ V
Sbjct: 147 LSSCSKLGILDFGRQVHSASVRFLLHNDMFVASGLVDMYSKCGQIGIARSIFNKMTERDV 206
Query: 298 FLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEY 357
W S+I G EA + FK++ + + P E++ A+ +++C+ L S+ G++I
Sbjct: 207 VCWNSIISGLTIHSLNKEAFDFFKQMRENGIMPTESSYASMINSCSRLSSIPHGRQIHAQ 266
Query: 358 IVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQA 417
++ +G + N V ++LI M++KCG ++ A+ F+ + K++ W+ MI+GYA +G+GD+A
Sbjct: 267 VMKDGYDQNVYVGSALIDMYAKCGNMDDARLFFDTMMMKNIVAWNEMIHGYAQNGLGDKA 326
Query: 418 LNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLV 477
+ LF M E KPDAV + ++L+ CSHSG+VD ++FF SM++++GI P EHY CL+
Sbjct: 327 VELFEYMLTTEQ-KPDAVTFIAVLTGCSHSGLVDKAMAFFNSMENSYGIIPLAEHYTCLI 385
Query: 478 DLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTG 537
D LGRAGRF IH+MP + +W LL+AC+ HHN ELG+ AA++L ++P +
Sbjct: 386 DALGRAGRFVEVEALIHKMPCKDDPIIWEVLLAACVVHHNAELGKCAAEHLFRIDPKNPS 445
Query: 538 NYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGD 589
Y+L++N++ S G +A+ R LM +R + K G+S ++ V+ F+ D
Sbjct: 446 PYVLLSNIYASLGRHGDASAVRALMSNRGVVKGRGYSWIDQKDGVRAFMVAD 497
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 75/238 (31%), Positives = 125/238 (52%), Gaps = 7/238 (2%)
Query: 12 EETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGL 71
++T+ + M V + T ++L +C+ + + G++VHS ++ D FV +GL
Sbjct: 122 QDTIELFRRMQHQNVQPDRTTLAVILSSCSKLGILDFGRQVHSASVRFLLHNDMFVASGL 181
Query: 72 IDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLEL 131
+DMYSKC +R + ++M R VV WNSIIS + LN EA K+M G+
Sbjct: 182 VDMYSKCGQIGIARSIFNKMTE--RDVVCWNSIISGLTIHSLNKEAFDFFKQMRENGIMP 239
Query: 132 SASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSI 187
+ S++ S+++ C S G +H V K G N + + ++++ MYAK G +++AR
Sbjct: 240 TESSYASMINSCSRLSSIPHGRQIHAQVMKDGYDQN-VYVGSALIDMYAKCGNMDDARLF 298
Query: 188 FDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVG 245
FD + +IV+W +I GY G ++A L M PD V F+ ++ GC+ G
Sbjct: 299 FDTMMMKNIVAWNEMIHGYAQNGLGDKAVELFEYMLTTEQKPDAVTFIAVLTGCSHSG 356
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 63/269 (23%), Positives = 122/269 (45%), Gaps = 33/269 (12%)
Query: 12 EETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGL 71
+E + M + G+ ++ ++ +C+ ++SI G+++H+ V+K G+ Q+ +V + L
Sbjct: 223 KEAFDFFKQMRENGIMPTESSYASMINSCSRLSSIPHGRQIHAQVMKDGYDQNVYVGSAL 282
Query: 72 IDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLEL 131
IDMY+KC + +R D M ++++V+WN +I +++ L D+A+ + + M +
Sbjct: 283 IDMYAKCGNMDDARLFFDTM--MMKNIVAWNEMIHGYAQNGLGDKAVELFEYMLTTEQKP 340
Query: 132 SASTFVSVVSGCSFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEI 191
A TF++V++GCS GL++ + NS+ + Y + D +
Sbjct: 341 DAVTFIAVLTGCSHS------------GLVDKAMAFFNSMENSYGIIPLAEHYTCLIDAL 388
Query: 192 GETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLAL 251
G G +V V EA + +M D +++ L+ C N L
Sbjct: 389 GRA---------GRFVEV----EAL-----IHKMPCKDDPIIWEVLLAACVVHHNAELGK 430
Query: 252 SMHSLLLKSGYNNEDPLDNLLVSMYTKCG 280
L + N P LL ++Y G
Sbjct: 431 CAAEHLFRIDPKNPSPY-VLLSNIYASLG 458
>gi|225445472|ref|XP_002281953.1| PREDICTED: pentatricopeptide repeat-containing protein At4g32430,
mitochondrial [Vitis vinifera]
Length = 773
Score = 332 bits (852), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 206/602 (34%), Positives = 333/602 (55%), Gaps = 24/602 (3%)
Query: 24 TGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVS 83
TGV ++ T VL C++ G ++HS +LK G + FV LI MYS+C V
Sbjct: 170 TGVAFDAVTCTTVLAFCSDHEGFIFGFQLHSRILKCGLDCEVFVGNALITMYSRCCRLVE 229
Query: 84 SRKVLDEMPVRLRSVVSWNSIISAHSRACLND-EAILVLKEMWVLGLELSASTFVSVVSG 142
+R+V DEM R + +VSWN+++S +++ + EAILV EM G++L +F +S
Sbjct: 230 ARRVFDEM--RNKDLVSWNAMLSGYAQEGNSGLEAILVFLEMLKEGMKLDHVSFTGAISA 287
Query: 143 C----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVS 198
C F G +H K+G + + + N ++S Y+K + +A+ +F+ I + ++VS
Sbjct: 288 CGHGKEFELGRQIHSLAVKIGY-DTHVKVCNVLISTYSKCEDIEDAKLVFESIIDRNVVS 346
Query: 199 WTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLL 258
WTT+I + +A L N+MRR V P+ V F+ LI + +H + +
Sbjct: 347 WTTMISI-----SEEDATSLFNEMRRDGVYPNDVTFVGLIHAITMKNLVEEGQMIHGVCV 401
Query: 259 KSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVN 318
K+ + +E + N L++MY K + + +VF+ + + + W S+I GYAQ G EA+
Sbjct: 402 KTSFLSELNVSNSLITMYAKFESMSDSMKVFEELNYREIISWNSLISGYAQNGLWQEALQ 461
Query: 319 LFKRLLKTSVRPNEATLATTLS--ACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHM 376
F L S RPNE T + LS A AE S+ G+ +I+ GL +N V ++L+ M
Sbjct: 462 TFLSALMES-RPNEFTFGSVLSSIASAEAISMRHGQRCHSHILKLGLNTNPIVSSALLDM 520
Query: 377 FSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVV 436
++K G I ++ VF P K+ W+A+I+ +A HG + +NLF M+ EG+KPD++
Sbjct: 521 YAKRGSICESLGVFSETPLKNEVAWTAIISAHARHGDYEAVMNLFKDMER-EGVKPDSIT 579
Query: 437 YTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEM 496
+ ++++AC GMVD G F SM + IEPS EHY +VD+LGRAGR A + + ++
Sbjct: 580 FLAVITACGRKGMVDTGYQLFNSMVKDHLIEPSPEHYSSMVDMLGRAGRLKEAEEFVGQI 639
Query: 497 PVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAA 556
P V LL AC H NV++ + A +L+ + P +G+Y+LM+NL+ G W++ A
Sbjct: 640 PGGAGLSVLQSLLGACRIHGNVDMAKRVADDLIEMEPMGSGSYVLMSNLYAEKGEWEKVA 699
Query: 557 TARGLMDDRRLTKEPGWSQVEI---DGSVQV--FVAGDRSHHLSVDIRKTLKE--LHIKL 609
R M +R + KE G+S V++ DGS+ + F + D+ H S +I + + L +K
Sbjct: 700 KIRKGMRERGVRKEIGFSWVDVGDADGSLYLHGFSSDDKFHPQSEEIYRMAETLGLEMKF 759
Query: 610 LE 611
LE
Sbjct: 760 LE 761
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 141/519 (27%), Positives = 254/519 (48%), Gaps = 32/519 (6%)
Query: 13 ETLSTYSSMLQTGVHGN--SFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTG 70
E L + LQ G GN T +VLKAC + + G ++H+ + GF V
Sbjct: 61 EALDLFKKQLQWGFVGNIDQVTVAIVLKACCGDSKL--GCQIHAFAISSGFISHVTVPNS 118
Query: 71 LIDMYSKCSDFVSSRKVLDEM--PVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLG 128
L++MY K F + V + + P +VSWN+++S R+ D+A+ M G
Sbjct: 119 LMNMYCKAGLFDRALVVFENLNNP----DIVSWNTVLSGFQRS---DDALNFALRMNFTG 171
Query: 129 LELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEA 184
+ A T +V++ CS F G +H + K G L+ E+ + N++++MY++ ++ EA
Sbjct: 172 VAFDAVTCTTVLAFCSDHEGFIFGFQLHSRILKCG-LDCEVFVGNALITMYSRCCRLVEA 230
Query: 185 RSIFDEIGETSIVSWTTIIGGYVNVGNVN-EAFGLCNQMRRMSVTPDLVVFLNLILGCAQ 243
R +FDE+ +VSW ++ GY GN EA + +M + + D V F I C
Sbjct: 231 RRVFDEMRNKDLVSWNAMLSGYAQEGNSGLEAILVFLEMLKEGMKLDHVSFTGAISACGH 290
Query: 244 VGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSM 303
L +HSL +K GY+ + N+L+S Y+KC D+E A+ VF+++++++V WT+M
Sbjct: 291 GKEFELGRQIHSLAVKIGYDTHVKVCNVLISTYSKCEDIEDAKLVFESIIDRNVVSWTTM 350
Query: 304 IGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGL 363
I + +A +LF + + V PN+ T + A + +G+ I V
Sbjct: 351 ISISEE-----DATSLFNEMRRDGVYPNDVTFVGLIHAITMKNLVEEGQMIHGVCVKTSF 405
Query: 364 ESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYK 423
S V SLI M++K ++ + +VFE + +++ W+++I+GYA +G+ +AL F
Sbjct: 406 LSELNVSNSLITMYAKFESMSDSMKVFEELNYREIISWNSLISGYAQNGLWQEALQTF-- 463
Query: 424 MQHVEGLKPDAVVYTSILSACSHS---GMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLL 480
+ + +P+ + S+LS+ + + M ++ P + L+D+
Sbjct: 464 LSALMESRPNEFTFGSVLSSIASAEAISMRHGQRCHSHILKLGLNTNPIVSS--ALLDMY 521
Query: 481 GRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVE 519
+ G +L E P++ + W ++SA +H + E
Sbjct: 522 AKRGSICESLGVFSETPLKNEV-AWTAIISAHARHGDYE 559
Score = 149 bits (375), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 106/381 (27%), Positives = 186/381 (48%), Gaps = 20/381 (5%)
Query: 81 FVSSRKV---LDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEM--WVLGLELSAST 135
F SS+ V LD+ P ++ S N + R L+ EA+ + K+ W + T
Sbjct: 25 FHSSKHVHQPLDQSP--QTTIASLNRSMLTALRRNLSLEALDLFKKQLQWGFVGNIDQVT 82
Query: 136 FVSVVSGC--SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGE 193
V+ C + G +H G +++ + + NS+M+MY K G + A +F+ +
Sbjct: 83 VAIVLKACCGDSKLGCQIHAFAISSGFISH-VTVPNSLMNMYCKAGLFDRALVVFENLNN 141
Query: 194 TSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSM 253
IVSW T++ G+ ++A +M V D V ++ C+ +
Sbjct: 142 PDIVSWNTVLSGF---QRSDDALNFALRMNFTGVAFDAVTCTTVLAFCSDHEGFIFGFQL 198
Query: 254 HSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYP 313
HS +LK G + E + N L++MY++C L ARRVFD + K + W +M+ GYAQ G
Sbjct: 199 HSRILKCGLDCEVFVGNALITMYSRCCRLVEARRVFDEMRNKDLVSWNAMLSGYAQEGNS 258
Query: 314 S-EAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTS 372
EA+ +F +LK ++ + + +SAC G++I V G +++ +V
Sbjct: 259 GLEAILVFLEMLKEGMKLDHVSFTGAISACGHGKEFELGRQIHSLAVKIGYDTHVKVCNV 318
Query: 373 LIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKP 432
LI +SKC I AK VFE + D+++ W+ MI+ + A +LF +M+ +G+ P
Sbjct: 319 LISTYSKCEDIEDAKLVFESIIDRNVVSWTTMISISE-----EDATSLFNEMRR-DGVYP 372
Query: 433 DAVVYTSILSACSHSGMVDDG 453
+ V + ++ A + +V++G
Sbjct: 373 NDVTFVGLIHAITMKNLVEEG 393
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 82/283 (28%), Positives = 137/283 (48%), Gaps = 11/283 (3%)
Query: 10 SFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQT 69
S E+ S ++ M + GV+ N TF ++ A N + +G+ +H +K F + V
Sbjct: 354 SEEDATSLFNEMRRDGVYPNDVTFVGLIHAITMKNLVEEGQMIHGVCVKTSFLSELNVSN 413
Query: 70 GLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGL 129
LI MY+K S KV +E+ R ++SWNS+IS +++ L EA+ ++
Sbjct: 414 SLITMYAKFESMSDSMKVFEEL--NYREIISWNSLISGYAQNGLWQEALQTFLSA-LMES 470
Query: 130 ELSASTFVSVVSGCSFRQGISM------HCCVYKLGLLNNEIPLANSVMSMYAKFGKVNE 183
+ TF SV+S + + ISM H + KLGL N I ++++++ MYAK G + E
Sbjct: 471 RPNEFTFGSVLSSIASAEAISMRHGQRCHSHILKLGLNTNPI-VSSALLDMYAKRGSICE 529
Query: 184 ARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQ 243
+ +F E + V+WT II + G+ L M R V PD + FL +I C +
Sbjct: 530 SLGVFSETPLKNEVAWTAIISAHARHGDYEAVMNLFKDMEREGVKPDSITFLAVITACGR 589
Query: 244 VGNLFLALSMHSLLLKSGYNNEDPLD-NLLVSMYTKCGDLELA 285
G + + + ++K P + +V M + G L+ A
Sbjct: 590 KGMVDTGYQLFNSMVKDHLIEPSPEHYSSMVDMLGRAGRLKEA 632
>gi|224099379|ref|XP_002311462.1| predicted protein [Populus trichocarpa]
gi|222851282|gb|EEE88829.1| predicted protein [Populus trichocarpa]
Length = 538
Score = 332 bits (852), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 186/541 (34%), Positives = 305/541 (56%), Gaps = 23/541 (4%)
Query: 83 SSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSG 142
++ KV D++P S+ WN++ +S+ + + I++ ++M L + + TF ++
Sbjct: 3 NAHKVFDQIPEPNASI--WNAMFRGYSQNESHKDVIVLFRQMKGLDVMPNCFTFPVILKS 60
Query: 143 C----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVS 198
C + ++G +HC V K G N +A +++ MYA G ++ A +F E+ E ++++
Sbjct: 61 CVKINALKEGEEVHCFVIKSGFRANPF-VATTLIDMYASGGAIHAAYRVFGEMIERNVIA 119
Query: 199 WTTIIGGYVNVGNVNEAFGLCNQMRRMSVTP--DLVVFLNLILGCAQVGNLFLALSMHSL 256
WT +I GY+ + L R + P D+V++ +I G + ++ A +
Sbjct: 120 WTAMINGYITCCD------LVTARRLFDLAPERDIVLWNTMISGYIEAKDVIRARELFDK 173
Query: 257 LLKSGYNNEDPLD-NLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSE 315
+ N+D + N +++ Y GD+ R+F+ + E++VF W ++IGGY + G SE
Sbjct: 174 M-----PNKDVMSWNTVLNGYASNGDVMACERLFEEMPERNVFSWNALIGGYTRNGCFSE 228
Query: 316 AVNLFKRLL-KTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLI 374
++ FKR+L +V PN+ATL LSACA LG+L GK + Y +G + N V+ +L+
Sbjct: 229 VLSAFKRMLVDGTVVPNDATLVNVLSACARLGALDLGKWVHVYAESHGYKGNVYVRNALM 288
Query: 375 HMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDA 434
M++KCG + A +VF+ + +KDL W+ +I G A+HG G ALNLF M+ + G PD
Sbjct: 289 DMYAKCGVVETALDVFKSMDNKDLISWNTIIGGLAVHGHGADALNLFSHMK-IAGENPDG 347
Query: 435 VVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIH 494
+ + IL AC+H G+V+DG S+FKSM ++ I P IEHY C+VDLLGRAG A+ I
Sbjct: 348 ITFIGILCACTHMGLVEDGFSYFKSMTDDYSIVPRIEHYGCIVDLLGRAGLLAHAVDFIR 407
Query: 495 EMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKE 554
+MP+E A +WA LL AC + NVEL E A + L+ P + NY++++N++ G WK+
Sbjct: 408 KMPIEADAVIWAALLGACRVYKNVELAELALEKLIEFEPKNPANYVMLSNIYGDFGRWKD 467
Query: 555 AATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKELHIKLLEAGY 614
A + M D K PG S +E++ + F + D H I TL+ L L +GY
Sbjct: 468 VARLKVAMRDTGFKKLPGCSLIEVNDYLVEFYSLDERHPEKEQIYGTLRTLTKLLRSSGY 527
Query: 615 I 615
+
Sbjct: 528 V 528
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 111/421 (26%), Positives = 209/421 (49%), Gaps = 24/421 (5%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
M R + N S ++ + + M V N FTFP++LK+C IN++ +G+ VH V+K G
Sbjct: 22 MFRGYSQNESHKDVIVLFRQMKGLDVMPNCFTFPVILKSCVKINALKEGEEVHCFVIKSG 81
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F+ + FV T LIDMY+ ++ +V EM R+V++W ++I+ + C ++
Sbjct: 82 FRANPFVATTLIDMYASGGAIHAAYRVFGEMIE--RNVIAWTAMINGYITCC----DLVT 135
Query: 121 LKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGK 180
+ ++ L E + +++SG + + ++ + N ++ N+V++ YA G
Sbjct: 136 ARRLFDLAPERDIVLWNTMISGYIEAKDVIRARELFD-KMPNKDVMSWNTVLNGYASNGD 194
Query: 181 VNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRM----SVTPDLVVFLN 236
V +F+E+ E ++ SW +IGGY G +E + +RM +V P+ +N
Sbjct: 195 VMACERLFEEMPERNVFSWNALIGGYTRNGCFSEVL---SAFKRMLVDGTVVPNDATLVN 251
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
++ CA++G L L +H GY + N L+ MY KCG +E A VF ++ K
Sbjct: 252 VLSACARLGALDLGKWVHVYAESHGYKGNVYVRNALMDMYAKCGVVETALDVFKSMDNKD 311
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKG----- 351
+ W ++IGG A G+ ++A+NLF + P+ T L AC +G + G
Sbjct: 312 LISWNTIIGGLAVHGHGADALNLFSHMKIAGENPDGITFIGILCACTHMGLVEDGFSYFK 371
Query: 352 KEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVP-DKDLAVWSAMINGYAI 410
++Y ++ +E ++ + + G + A + ++P + D +W+A++ +
Sbjct: 372 SMTDDYSIVPRIEH----YGCIVDLLGRAGLLAHAVDFIRKMPIEADAVIWAALLGACRV 427
Query: 411 H 411
+
Sbjct: 428 Y 428
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 75/127 (59%)
Query: 282 LELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSA 341
+E A +VFD + E + +W +M GY+Q + + LF+++ V PN T L +
Sbjct: 1 MENAHKVFDQIPEPNASIWNAMFRGYSQNESHKDVIVLFRQMKGLDVMPNCFTFPVILKS 60
Query: 342 CAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVW 401
C ++ +L +G+E+ +++ +G +N V T+LI M++ G I+ A VF + ++++ W
Sbjct: 61 CVKINALKEGEEVHCFVIKSGFRANPFVATTLIDMYASGGAIHAAYRVFGEMIERNVIAW 120
Query: 402 SAMINGY 408
+AMINGY
Sbjct: 121 TAMINGY 127
>gi|6723387|emb|CAB66396.1| putative protein [Arabidopsis thaliana]
Length = 1113
Score = 332 bits (852), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 200/626 (31%), Positives = 332/626 (53%), Gaps = 17/626 (2%)
Query: 7 NNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG-FQQDA 65
NNG + + + L+ G+ N + + V++AC+N + + G+ ++K G F+ D
Sbjct: 143 NNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDV 202
Query: 66 FVQTGLIDMYSKCSD-FVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEM 124
V LIDM+ K + F ++ KV D+M +VV+W +I+ + EAI +M
Sbjct: 203 CVGCSLIDMFVKGENSFENAYKVFDKMSEL--NVVTWTLMITRCMQMGFPREAIRFFLDM 260
Query: 125 WVLGLELSASTFVSVVSGCSFRQGISM----HCCVYKLGLLNNEIPLANSVMSMYAKF-- 178
+ G E T SV S C+ + +S+ H + GL+++ + S++ MYAK
Sbjct: 261 VLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDD---VECSLVDMYAKCSA 317
Query: 179 -GKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNV-NEAFGLCNQM-RRMSVTPDLVVFL 235
G V++ R +FD + + S++SWT +I GY+ N+ EA L ++M + V P+ F
Sbjct: 318 DGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFS 377
Query: 236 NLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEK 295
+ C + + + + K G + + N ++SM+ K +E A+R F+++ EK
Sbjct: 378 SAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEK 437
Query: 296 SVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIE 355
++ + + + G + +A L + + + + T A+ LS A +GS+ KG++I
Sbjct: 438 NLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIH 497
Query: 356 EYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGD 415
+V GL N+ V +LI M+SKCG I+ A VF + ++++ W++MI G+A HG
Sbjct: 498 SQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAI 557
Query: 416 QALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLC 475
+ L F +M EG+KP+ V Y +ILSACSH G+V +G F SM + I+P +EHY C
Sbjct: 558 RVLETFNQMIE-EGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYAC 616
Query: 476 LVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGS 535
+VDLL RAG A + I+ MP + VW L AC H N ELG+ AA+ +L L+P
Sbjct: 617 MVDLLCRAGLLTDAFEFINTMPFQADVLVWRTFLGACRVHSNTELGKLAARKILELDPNE 676
Query: 536 TGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLS 595
YI ++N++ AG W+E+ R M +R L KE G S +E+ + F GD +H +
Sbjct: 677 PAAYIQLSNIYACAGKWEESTEMRRKMKERNLVKEGGCSWIEVGDKIHKFYVGDTAHPNA 736
Query: 596 VDIRKTLKELHIKLLEAGYIAEADIV 621
I L L ++ GY+ + D+V
Sbjct: 737 HQIYDELDRLITEIKRCGYVPDTDLV 762
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 141/529 (26%), Positives = 243/529 (45%), Gaps = 21/529 (3%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHG-NSFTFPLVLKACANINSIWDGKRVHSHVLKV 59
+I N G +S M + G+ +S TF +LK+C GK VH+ +++
Sbjct: 32 LILRHLNAGDLRGAVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEF 91
Query: 60 GFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEM-PVRLRSVVSWNSIISAHSRACLNDEAI 118
+ D+ + LI +YSK D + V + M R VVSW+++++ + +AI
Sbjct: 92 DIEPDSVLYNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAI 151
Query: 119 LVLKEMWVLGLELSASTFVSVVSGCSFRQGISMHCC----VYKLGLLNNEIPLANSVMSM 174
V E LGL + + +V+ CS + + + K G +++ + S++ M
Sbjct: 152 KVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDM 211
Query: 175 YAKFGKVNE-ARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVV 233
+ K E A +FD++ E ++V+WT +I + +G EA M D
Sbjct: 212 FVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFT 271
Query: 234 FLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKC---GDLELARRVFD 290
++ CA++ NL L +HS ++SG D ++ LV MY KC G ++ R+VFD
Sbjct: 272 LSSVFSACAELENLSLGKQLHSWAIRSGL--VDDVECSLVDMYAKCSADGSVDDCRKVFD 329
Query: 291 AVLEKSVFLWTSMIGGYAQ-LGYPSEAVNLFKRLL-KTSVRPNEATLATTLSACAELGSL 348
+ + SV WT++I GY + +EA+NLF ++ + V PN T ++ AC L
Sbjct: 330 RMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDP 389
Query: 349 SKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGY 408
GK++ GL SN V S+I MF K R+ A+ FE + +K+L ++ ++G
Sbjct: 390 RVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGT 449
Query: 409 AIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEP 468
+ +QA L ++ E L A + S+LS ++ G + G S G+
Sbjct: 450 CRNLNFEQAFKLLSEITERE-LGVSAFTFASLLSGVANVGSIRKGEQ-IHSQVVKLGL-- 505
Query: 469 SIEHYLC--LVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKH 515
S +C L+ + + G D A + + M W +++ KH
Sbjct: 506 SCNQPVCNALISMYSKCGSIDTASRVFNFME-NRNVISWTSMITGFAKH 553
>gi|225449732|ref|XP_002267472.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Vitis vinifera]
Length = 1058
Score = 332 bits (852), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 196/652 (30%), Positives = 333/652 (51%), Gaps = 40/652 (6%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI + + E + M +T + F +VL A ++ + + +K G
Sbjct: 332 MISGYVHISDYWEAWDVFVKMCRTVARPDQSIFVVVLSAITGLDDLELIGSLRPIAIKTG 391
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
++ D V + +++ Y++ + + MP R + SW ++I+A ++ D+AI +
Sbjct: 392 YEGDVVVGSAILNAYTRNGSLDLAMHFFETMPER--NEYSWTTMIAAFAQCGRLDDAIQL 449
Query: 121 LKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGK 180
+ + E + +T ++++ + I ++ +LN + N++++ Y + G
Sbjct: 450 YERV----PEQTVATKTAMMTAYAQVGRIQKARLIFD-EILNPNVVAWNAIIAGYTQNGM 504
Query: 181 VNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILG 240
+ EA+ +F ++ + SW +I G+V EA L ++ R P F + +
Sbjct: 505 LKEAKDLFQKMPVKNSASWAAMIAGFVQNEESREALELLIELHRSGSVPSDSSFTSALSA 564
Query: 241 CAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLEL---------------- 284
CA +G++ + +HSL +K+G + N L+SMY KCG++E
Sbjct: 565 CANIGDVEIGRVIHSLAIKTGCQFNSYVMNGLISMYAKCGNVEDGSHVFRTIRVKDTVSW 624
Query: 285 ---------------ARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVR 329
AR VF+ + ++ V WT++I Y Q G+ A++LF +L ++
Sbjct: 625 NSLISGLSENYMLDDARVVFEKMPKRDVVSWTAIISAYVQAGHGEVALDLFLDMLARGIK 684
Query: 330 PNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEV 389
PN+ T+ + LSAC LG++ G++ I G ++ V SLI M+ KCG V
Sbjct: 685 PNQLTVTSLLSACGNLGAIKLGEQFHALIFKLGFDTFLFVGNSLITMYFKCG-YEDGFCV 743
Query: 390 FERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGM 449
FE +P+ DL W+A++ G A +G+G +A+ +F +M+ VEG+ PD + + +L ACSH+G+
Sbjct: 744 FEEMPEHDLITWNAVLVGCAQNGLGKEAIKIFEQME-VEGILPDQMSFLGVLCACSHAGL 802
Query: 450 VDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLL 509
VD+G + F SM +GI P + HY C+VDLLGRAG A I MPV+ + +W LL
Sbjct: 803 VDEGWAHFNSMTQKYGIMPLVYHYTCMVDLLGRAGYLSEAEALIENMPVKPDSVIWEALL 862
Query: 510 SACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTK 569
AC H NVELG+ A+ L + + Y+L++NLF S GMW + A R LM D+ LTK
Sbjct: 863 GACRIHRNVELGQRVAERLFQMTKPKSATYVLLSNLFASQGMWDKVAEIRKLMKDQGLTK 922
Query: 570 EPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKELHIKLLEAGYIAEADIV 621
EPG S +++ + FV GDR+H +I LKE + GY+ + + V
Sbjct: 923 EPGISWIQVKNKLHCFVTGDRTHDQIEEIYSALKEYYGCFRATGYMPDTNFV 974
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 116/396 (29%), Positives = 209/396 (52%), Gaps = 37/396 (9%)
Query: 84 SRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLK-------EMWVLGL------- 129
+R+V +EM R VVSWNS+I+ +S+ DEA L+ W + L
Sbjct: 190 ARRVFNEMI--QRDVVSWNSMINGYSQNGKVDEARLLFDAFVGKNIRTWTILLTGYAKEG 247
Query: 130 --ELSASTFVS-----VVSGCSFRQGISMHCCVYKLGLLNNEIPLAN-----SVMSMYAK 177
E + F S VVS + G + + L +E+P N SV++ Y
Sbjct: 248 RIEEAREVFESMTERNVVSWNAMISGYVQNGDLKNARKLFDEMPEKNVASWNSVVTGYCH 307
Query: 178 FGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNL 237
+++EAR +FD++ E + VSW +I GYV++ + EA+ + +M R PD +F+ +
Sbjct: 308 CYRMSEARELFDQMPERNSVSWMVMISGYVHISDYWEAWDVFVKMCRTVARPDQSIFVVV 367
Query: 238 ILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSV 297
+ + +L L S+ + +K+GY + + + +++ YT+ G L+LA F+ + E++
Sbjct: 368 LSAITGLDDLELIGSLRPIAIKTGYEGDVVVGSAILNAYTRNGSLDLAMHFFETMPERNE 427
Query: 298 FLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEY 357
+ WT+MI +AQ G +A+ L++R+ + +V AT ++A A++G + K + I +
Sbjct: 428 YSWTTMIAAFAQCGRLDDAIQLYERVPEQTV----ATKTAMMTAYAQVGRIQKARLIFDE 483
Query: 358 IVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQA 417
I L N ++I +++ G + +AK++F+++P K+ A W+AMI G+ + +A
Sbjct: 484 I----LNPNVVAWNAIIAGYTQNGMLKEAKDLFQKMPVKNSASWAAMIAGFVQNEESREA 539
Query: 418 LNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDG 453
L L ++ H G P +TS LSAC++ G V+ G
Sbjct: 540 LELLIEL-HRSGSVPSDSSFTSALSACANIGDVEIG 574
Score = 117 bits (292), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 91/368 (24%), Positives = 165/368 (44%), Gaps = 72/368 (19%)
Query: 156 YKLGLLNNEIPLA-----NSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVG 210
+K G N E P N+ + + G+V EAR +F+E+ + +VSW ++I GY G
Sbjct: 157 HKSGAKNKETPQTHLFQCNTRIQELGRLGRVEEARRVFNEMIQRDVVSWNSMINGYSQNG 216
Query: 211 NVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNL------FLALSMHSLL----LKS 260
V+EA L + V ++ + L+ G A+ G + F +++ +++ + S
Sbjct: 217 KVDEARLLFDAF----VGKNIRTWTILLTGYAKEGRIEEAREVFESMTERNVVSWNAMIS 272
Query: 261 GYNNEDPLDNL-----------------LVSMYTKCGDLELARRVFDAVLEKSVFLWTSM 303
GY L N +V+ Y C + AR +FD + E++ W M
Sbjct: 273 GYVQNGDLKNARKLFDEMPEKNVASWNSVVTGYCHCYRMSEARELFDQMPERNSVSWMVM 332
Query: 304 IGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLS-------------- 349
I GY + EA ++F ++ +T RP+++ LSA L L
Sbjct: 333 ISGYVHISDYWEAWDVFVKMCRTVARPDQSIFVVVLSAITGLDDLELIGSLRPIAIKTGY 392
Query: 350 KGKEIEEYIVLNGL-----------------ESNRQVQTSLIHMFSKCGRINKAKEVFER 392
+G + +LN E N T++I F++CGR++ A +++ER
Sbjct: 393 EGDVVVGSAILNAYTRNGSLDLAMHFFETMPERNEYSWTTMIAAFAQCGRLDDAIQLYER 452
Query: 393 VPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDD 452
VP++ +A +AM+ YA G +A +F ++ L P+ V + +I++ + +GM+ +
Sbjct: 453 VPEQTVATKTAMMTAYAQVGRIQKARLIFDEI-----LNPNVVAWNAIIAGYTQNGMLKE 507
Query: 453 GLSFFKSM 460
F+ M
Sbjct: 508 AKDLFQKM 515
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 94/395 (23%), Positives = 163/395 (41%), Gaps = 90/395 (22%)
Query: 259 KSG-YNNEDPLDNLL-----VSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGY 312
KSG N E P +L + + G +E ARRVF+ ++++ V W SMI GY+Q G
Sbjct: 158 KSGAKNKETPQTHLFQCNTRIQELGRLGRVEEARRVFNEMIQRDVVSWNSMINGYSQNGK 217
Query: 313 PSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYI-------------- 358
EA LF + ++R T L+ A+ G + + +E+ E +
Sbjct: 218 VDEARLLFDAFVGKNIR----TWTILLTGYAKEGRIEEAREVFESMTERNVVSWNAMISG 273
Query: 359 -VLNG------------LESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMI 405
V NG E N S++ + C R+++A+E+F+++P+++ W MI
Sbjct: 274 YVQNGDLKNARKLFDEMPEKNVASWNSVVTGYCHCYRMSEARELFDQMPERNSVSWMVMI 333
Query: 406 NGYAIHGMGDQALNLFYKM-------------------------QHVEGLKP-------- 432
+GY +A ++F KM + + L+P
Sbjct: 334 SGYVHISDYWEAWDVFVKMCRTVARPDQSIFVVVLSAITGLDDLELIGSLRPIAIKTGYE 393
Query: 433 -DAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALK 491
D VV ++IL+A + +G +D + FF++M E + + ++ + GR D A++
Sbjct: 394 GDVVVGSAILNAYTRNGSLDLAMHFFETMP-----ERNEYSWTTMIAAFAQCGRLDDAIQ 448
Query: 492 TIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLL---TLNPGSTGNYILMANLFTS 548
+P + A M ++G L+ LNP ++A +T
Sbjct: 449 LYERVPEQTVAT------KTAMMTAYAQVGRIQKARLIFDEILNPNVVAWNAIIAG-YTQ 501
Query: 549 AGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQ 583
GM KE A+ L + W+ + I G VQ
Sbjct: 502 NGMLKE---AKDLFQKMPVKNSASWAAM-IAGFVQ 532
>gi|449456661|ref|XP_004146067.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22150,
chloroplastic-like [Cucumis sativus]
Length = 793
Score = 332 bits (851), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 201/616 (32%), Positives = 332/616 (53%), Gaps = 17/616 (2%)
Query: 11 FEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG--FQQDAFVQ 68
+ E + +S M++ G+ + +F V A +++ + VH ++K+G + D +V
Sbjct: 167 YAEAVKQFSMMMKIGIKPSPVSFVNVFPAFSSLGDFKNANVVHGMLVKLGSEYVNDLYVV 226
Query: 69 TGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAI-LVLKEMWVL 127
+ I MY++ ++KV D R V WN++ISA + + E I L + +
Sbjct: 227 SSAIFMYAELGCLEFAKKVFDNCLERNTEV--WNTMISAFVQNNFSLEGIQLFFQAVESE 284
Query: 128 GLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNE 183
+ T +S +S S F +H V K + ++ + N++++MY++ ++
Sbjct: 285 DAAIDEVTLLSAISAASHLQKFELAEQLHAFVIK-NVAVTQVCVMNALIAMYSRCNSIDT 343
Query: 184 ARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQ 243
+ IFD + E +VSW T+I +V G +EA L +M++ + D V L+ +
Sbjct: 344 SFKIFDNMPEKDVVSWNTMISAFVQNGLNDEALMLFYEMKKQDLMVDSVTVTALLSAASD 403
Query: 244 VGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVL--EKSVFLWT 301
+ N + H LL++G E +D+ L+ MY K G +E A+ VF+ E+ W
Sbjct: 404 LRNPDIGKQTHGYLLRNGIQFEG-MDSYLIDMYAKSGLIEAAQNVFEKSFSHERDQATWN 462
Query: 302 SMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLN 361
SM+ GY Q G +A + +++L V PN TLA+ L AC G + GK++ + + N
Sbjct: 463 SMMSGYTQNGLVDQAFLILRQMLDQKVMPNVVTLASILPACNPSGYIDWGKQLHGFSIRN 522
Query: 362 GLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLF 421
L+ N V T+LI M+SK G I A+ VF + +K + +S MI GY HGMG+ AL +F
Sbjct: 523 DLDQNVFVATALIDMYSKSGSIAHAENVFSKANEKSIVTYSTMILGYGQHGMGESALFMF 582
Query: 422 YKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLG 481
++MQ G++PDAV ++LSACS++G+VD+GL F+SM++ + I+PS EH+ C+ D+LG
Sbjct: 583 HRMQK-SGIQPDAVTLVAVLSACSYAGLVDEGLQIFESMRTVYNIQPSTEHFCCVADMLG 641
Query: 482 RAGRFDLALKTIHEMPVEVQA-QVWAPLLSACMKHHNVELGEYAAKNLLTLNP--GSTGN 538
RAGR D A + + + + ++W LL+AC H ELG+ AK LL + G TG
Sbjct: 642 RAGRVDKAYEFVIGLGEKGNVMEIWGSLLAACRIHKQFELGKLVAKKLLEMEKINGKTGY 701
Query: 539 YILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDI 598
++L++N++ W+ R M +R L KE G S +EI G + F + DR H S I
Sbjct: 702 HVLLSNIYAEERNWENVDIVRKQMRERGLKKETGSSWIEIAGYMNHFASKDRKHPQSDQI 761
Query: 599 RKTLKELHIKLLEAGY 614
L+EL +++ AGY
Sbjct: 762 YSMLEELLMEMKHAGY 777
Score = 202 bits (514), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 167/598 (27%), Positives = 283/598 (47%), Gaps = 64/598 (10%)
Query: 12 EETLSTYSSMLQTG--VHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQT 69
+E L YS+M + V +S+T+ VLKACA+ ++ GK VH+H L+ V
Sbjct: 52 DEALLFYSNMKSSSPQVKCDSYTYSSVLKACADTRNLVVGKAVHAHFLRCLMNPSRIVYN 111
Query: 70 GLIDMYSKCSDFVSS-------------RKVLDEMPVRLRSVVSWNSIISAHSRACLNDE 116
L++MYS CS RKV D M R R+VV+WN++I+ + R E
Sbjct: 112 SLLNMYSMCSSTTPDGKMVSGYSRCDLVRKVFDTM--RKRTVVAWNTLIAWYVRTERYAE 169
Query: 117 AILVLKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGL-LNNEIPLANSV 171
A+ M +G++ S +FV+V S F+ +H + KLG N++ + +S
Sbjct: 170 AVKQFSMMMKIGIKPSPVSFVNVFPAFSSLGDFKNANVVHGMLVKLGSEYVNDLYVVSSA 229
Query: 172 MSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQ-MRRMSVTPD 230
+ MYA+ G + A+ +FD E + W T+I +V E L Q + D
Sbjct: 230 IFMYAELGCLEFAKKVFDNCLERNTEVWNTMISAFVQNNFSLEGIQLFFQAVESEDAAID 289
Query: 231 LVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFD 290
V L+ I + + LA +H+ ++K+ + + N L++MY++C ++ + ++FD
Sbjct: 290 EVTLLSAISAASHLQKFELAEQLHAFVIKNVAVTQVCVMNALIAMYSRCNSIDTSFKIFD 349
Query: 291 AVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSK 350
+ EK V W +MI + Q G EA+ LF + K + + T+ LSA ++L +
Sbjct: 350 NMPEKDVVSWNTMISAFVQNGLNDEALMLFYEMKKQDLMVDSVTVTALLSAASDLRNPDI 409
Query: 351 GKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFER--VPDKDLAVWSAMINGY 408
GK+ Y++ NG++ + + LI M++K G I A+ VFE+ ++D A W++M++GY
Sbjct: 410 GKQTHGYLLRNGIQF-EGMDSYLIDMYAKSGLIEAAQNVFEKSFSHERDQATWNSMMSGY 468
Query: 409 AIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVD-----DGLSFFKSMQSN 463
+G+ DQA + +M + + P+ V SIL AC+ SG +D G S + N
Sbjct: 469 TQNGLVDQAFLILRQMLD-QKVMPNVVTLASILPACNPSGYIDWGKQLHGFSIRNDLDQN 527
Query: 464 FGI-------------------------EPSIEHYLCLVDLLGRAGRFDLALKTIHEMP- 497
+ E SI Y ++ G+ G + AL H M
Sbjct: 528 VFVATALIDMYSKSGSIAHAENVFSKANEKSIVTYSTMILGYGQHGMGESALFMFHRMQK 587
Query: 498 --VEVQAQVWAPLLSACMKHHNVELGEYAAKNLLT---LNPGSTGNYILMANLFTSAG 550
++ A +LSAC V+ G +++ T + P ST ++ +A++ AG
Sbjct: 588 SGIQPDAVTLVAVLSACSYAGLVDEGLQIFESMRTVYNIQP-STEHFCCVADMLGRAG 644
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 115/429 (26%), Positives = 220/429 (51%), Gaps = 30/429 (6%)
Query: 84 SRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLG--LELSASTFVSVVS 141
+R++ D +P S V WN+II DEA+L M ++ + T+ SV+
Sbjct: 23 ARQLFDALP--RPSTVLWNTIIIGLVCNNFPDEALLFYSNMKSSSPQVKCDSYTYSSVLK 80
Query: 142 GCSFRQ----GISMHCCVYKLGLLNNEIPLANSVMSMYAK-------------FGKVNEA 184
C+ + G ++H + L+N + NS+++MY+ + + +
Sbjct: 81 ACADTRNLVVGKAVHAHFLRC-LMNPSRIVYNSLLNMYSMCSSTTPDGKMVSGYSRCDLV 139
Query: 185 RSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQV 244
R +FD + + ++V+W T+I YV EA + M ++ + P V F+N+ + +
Sbjct: 140 RKVFDTMRKRTVVAWNTLIAWYVRTERYAEAVKQFSMMMKIGIKPSPVSFVNVFPAFSSL 199
Query: 245 GNLFLALSMHSLLLKSG--YNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTS 302
G+ A +H +L+K G Y N+ + + + MY + G LE A++VFD LE++ +W +
Sbjct: 200 GDFKNANVVHGMLVKLGSEYVNDLYVVSSAIFMYAELGCLEFAKKVFDNCLERNTEVWNT 259
Query: 303 MIGGYAQLGYPSEAVNLFKRLLKT-SVRPNEATLATTLSACAELGSLSKGKEIEEYIVLN 361
MI + Q + E + LF + +++ +E TL + +SA + L +++ +++ N
Sbjct: 260 MISAFVQNNFSLEGIQLFFQAVESEDAAIDEVTLLSAISAASHLQKFELAEQLHAFVIKN 319
Query: 362 GLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLF 421
+ V +LI M+S+C I+ + ++F+ +P+KD+ W+ MI+ + +G+ D+AL LF
Sbjct: 320 VAVTQVCVMNALIAMYSRCNSIDTSFKIFDNMPEKDVVSWNTMISAFVQNGLNDEALMLF 379
Query: 422 YKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIE-PSIEHYLCLVDLL 480
Y+M+ + L D+V T++LSA S D G + N GI+ ++ Y L+D+
Sbjct: 380 YEMKK-QDLMVDSVTVTALLSAASDLRNPDIGKQTHGYLLRN-GIQFEGMDSY--LIDMY 435
Query: 481 GRAGRFDLA 489
++G + A
Sbjct: 436 AKSGLIEAA 444
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 112/418 (26%), Positives = 204/418 (48%), Gaps = 21/418 (5%)
Query: 7 NNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAF 66
NN S E + ++ + T + A +++ +++H+ V+K
Sbjct: 267 NNFSLEGIQLFFQAVESEDAAIDEVTLLSAISAASHLQKFELAEQLHAFVIKNVAVTQVC 326
Query: 67 VQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWV 126
V LI MYS+C+ +S K+ D MP + VVSWN++ISA + LNDEA+++ EM
Sbjct: 327 VMNALIAMYSRCNSIDTSFKIFDNMPE--KDVVSWNTMISAFVQNGLNDEALMLFYEMKK 384
Query: 127 LGLELSASTFVSVVSGCSFRQGISMHCCVYKLGLLNNEIP---LANSVMSMYAKFGKVNE 183
L + + T +++S S + + + LL N I + + ++ MYAK G +
Sbjct: 385 QDLMVDSVTVTALLSAASDLRNPDIGKQTHGY-LLRNGIQFEGMDSYLIDMYAKSGLIEA 443
Query: 184 ARSIFDE--IGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGC 241
A+++F++ E +W +++ GY G V++AF + QM V P++V +++ C
Sbjct: 444 AQNVFEKSFSHERDQATWNSMMSGYTQNGLVDQAFLILRQMLDQKVMPNVVTLASILPAC 503
Query: 242 AQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWT 301
G + +H +++ + + L+ MY+K G + A VF EKS+ ++
Sbjct: 504 NPSGYIDWGKQLHGFSIRNDLDQNVFVATALIDMYSKSGSIAHAENVFSKANEKSIVTYS 563
Query: 302 SMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLN 361
+MI GY Q G A+ +F R+ K+ ++P+ TL LSAC+ G + +G +I E
Sbjct: 564 TMILGYGQHGMGESALFMFHRMQKSGIQPDAVTLVAVLSACSYAGLVDEGLQIFE----- 618
Query: 362 GLESNRQVQTSLIH------MFSKCGRINKAKEVFERVPDKD--LAVWSAMINGYAIH 411
+ + +Q S H M + GR++KA E + +K + +W +++ IH
Sbjct: 619 SMRTVYNIQPSTEHFCCVADMLGRAGRVDKAYEFVIGLGEKGNVMEIWGSLLAACRIH 676
Score = 116 bits (290), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 87/358 (24%), Positives = 160/358 (44%), Gaps = 27/358 (7%)
Query: 179 GKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMS--VTPDLVVFLN 236
G+++ AR +FD + S V W TII G V +EA + M+ S V D + +
Sbjct: 18 GQLHLARQLFDALPRPSTVLWNTIIIGLVCNNFPDEALLFYSNMKSSSPQVKCDSYTYSS 77
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDL-------------E 283
++ CA NL + ++H+ L+ N + N L++MY+ C +
Sbjct: 78 VLKACADTRNLVVGKAVHAHFLRCLMNPSRIVYNSLLNMYSMCSSTTPDGKMVSGYSRCD 137
Query: 284 LARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACA 343
L R+VFD + +++V W ++I Y + +EAV F ++K ++P+ + A +
Sbjct: 138 LVRKVFDTMRKRTVVAWNTLIAWYVRTERYAEAVKQFSMMMKIGIKPSPVSFVNVFPAFS 197
Query: 344 ELGSLSKGKEIEEYIVLNGLE--SNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVW 401
LG + +V G E ++ V +S I M+++ G + AK+VF+ +++ VW
Sbjct: 198 SLGDFKNANVVHGMLVKLGSEYVNDLYVVSSAIFMYAELGCLEFAKKVFDNCLERNTEVW 257
Query: 402 SAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQ 461
+ MI+ + + + + LF++ E D V S +SA SH + +
Sbjct: 258 NTMISAFVQNNFSLEGIQLFFQAVESEDAAIDEVTLLSAISAASHLQKFELAEQLHAFVI 317
Query: 462 SNFGIEPSIEHYLC----LVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKH 515
N + +C L+ + R D + K MP E W ++SA +++
Sbjct: 318 KNVAVTQ-----VCVMNALIAMYSRCNSIDTSFKIFDNMP-EKDVVSWNTMISAFVQN 369
Score = 98.6 bits (244), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 129/248 (52%), Gaps = 4/248 (1%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI NG +E L + M + + +S T +L A +++ + GK+ H ++L+ G
Sbjct: 362 MISAFVQNGLNDEALMLFYEMKKQDLMVDSVTVTALLSAASDLRNPDIGKQTHGYLLRNG 421
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
Q + + + LIDMY+K +++ V ++ R +WNS++S +++ L D+A L+
Sbjct: 422 IQFEG-MDSYLIDMYAKSGLIEAAQNVFEKSFSHERDQATWNSMMSGYTQNGLVDQAFLI 480
Query: 121 LKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGL---LNNEIPLANSVMSMYAK 177
L++M + + T S++ C+ I ++ + L+ + +A +++ MY+K
Sbjct: 481 LRQMLDQKVMPNVVTLASILPACNPSGYIDWGKQLHGFSIRNDLDQNVFVATALIDMYSK 540
Query: 178 FGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNL 237
G + A ++F + E SIV+++T+I GY G A + ++M++ + PD V + +
Sbjct: 541 SGSIAHAENVFSKANEKSIVTYSTMILGYGQHGMGESALFMFHRMQKSGIQPDAVTLVAV 600
Query: 238 ILGCAQVG 245
+ C+ G
Sbjct: 601 LSACSYAG 608
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 120/255 (47%), Gaps = 22/255 (8%)
Query: 280 GDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTS---VRPNEATLA 336
G L LAR++FDA+ S LW ++I G +P EA+ LF +K+S V+ + T +
Sbjct: 18 GQLHLARQLFDALPRPSTVLWNTIIIGLVCNNFPDEAL-LFYSNMKSSSPQVKCDSYTYS 76
Query: 337 TTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKC-------------GRI 383
+ L ACA+ +L GK + + + + +R V SL++M+S C R
Sbjct: 77 SVLKACADTRNLVVGKAVHAHFLRCLMNPSRIVYNSLLNMYSMCSSTTPDGKMVSGYSRC 136
Query: 384 NKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSA 443
+ ++VF+ + + + W+ +I Y +A+ F M + G+KP V + ++ A
Sbjct: 137 DLVRKVFDTMRKRTVVAWNTLIAWYVRTERYAEAVKQFSMMMKI-GIKPSPVSFVNVFPA 195
Query: 444 CSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLC--LVDLLGRAGRFDLALKTIHEMPVEVQ 501
S G + + M G E + Y+ + + G + A K + + +E
Sbjct: 196 FSSLGDFKNA-NVVHGMLVKLGSEYVNDLYVVSSAIFMYAELGCLEFA-KKVFDNCLERN 253
Query: 502 AQVWAPLLSACMKHH 516
+VW ++SA ++++
Sbjct: 254 TEVWNTMISAFVQNN 268
>gi|147816454|emb|CAN77435.1| hypothetical protein VITISV_017817 [Vitis vinifera]
Length = 601
Score = 332 bits (851), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 178/525 (33%), Positives = 302/525 (57%), Gaps = 6/525 (1%)
Query: 101 WNSIISAHSRACLNDEAILVLKEMWVLGLELSASTF---VSVVSGCSFRQGISMHCCVYK 157
WN+II S + ++ + G+ TF + S + + K
Sbjct: 72 WNTIIRGFSASSQPQMVLVAYSRLRNHGVIPDRHTFPLLLKAFSKLRNENPFQFYAHIVK 131
Query: 158 LGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFG 217
GL + + + NS++S +A G V+ +R +F E + +VSWT +I G + G EA
Sbjct: 132 FGL-DFDAFVQNSLVSAFAHCGYVDCSRRLFIETAKKDVVSWTALINGCLRNGRAVEALE 190
Query: 218 LCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDP-LDNLLVSMY 276
+MR V D V ++++ A + +++ +H ++SG D + + LV MY
Sbjct: 191 CFVEMRSSGVEVDEVTIVSVLCAAAMLRDVWFGRWVHGFYVESGRVIWDVYVGSALVDMY 250
Query: 277 TKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLA 336
+KCG + A +VF+ + +++ W ++I GY Q EA+ +F+ ++ + PN++T+
Sbjct: 251 SKCGYCDDAVKVFNEMPTRNLVSWGALIAGYVQCNRYKEALKVFQEMIIEGIEPNQSTVT 310
Query: 337 TTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDK 396
+ L+ACA+LGSL +G+ + EY+ + L N ++ T+L+ M+SKCG +++A VFE++P K
Sbjct: 311 SALTACAQLGSLDQGRWLHEYVDRSKLGLNSKLGTALVDMYSKCGCVDEALLVFEKLPAK 370
Query: 397 DLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSF 456
D+ W+AMING A+ G +LNLF +M ++P+ V + +LSAC+H G+VD+GL
Sbjct: 371 DVYPWTAMINGLAMRGDALSSLNLFSQMIRSR-VQPNGVTFLGVLSACAHGGLVDEGLEL 429
Query: 457 FKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHH 516
F+ M ++ +EP+++HY C+VDLLGRAGR + A+K I MP+E VW L S CM H
Sbjct: 430 FRLMICDYRLEPNVDHYGCMVDLLGRAGRLEEAIKFIESMPMEPTPGVWGALFSGCMIHK 489
Query: 517 NVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQV 576
ELGE+ +L+ L P +G YIL+ANL++ W+ AA R LM + + K PG S +
Sbjct: 490 AFELGEHIGNHLIKLQPHHSGRYILLANLYSRCQKWEAAANVRRLMKGKGVDKSPGCSWI 549
Query: 577 EIDGSVQVFVAGDRSHHLSVDIRKTLKELHIKLLEAGYIAEADIV 621
E++G + F+A D+SH S+++ L+ + +L A Y +++++
Sbjct: 550 EVNGVIHEFIAFDKSHTESINVYMMLESVSAQLKLATYALDSNLL 594
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 124/434 (28%), Positives = 220/434 (50%), Gaps = 12/434 (2%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+IR + + + L YS + GV + TFPL+LKA + + + + + ++H++K G
Sbjct: 75 IIRGFSASSQPQMVLVAYSRLRNHGVIPDRHTFPLLLKAFSKLRNE-NPFQFYAHIVKFG 133
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
DAFVQ L+ ++ C SR++ E + VVSW ++I+ R EA+
Sbjct: 134 LDFDAFVQNSLVSAFAHCGYVDCSRRLFIETAK--KDVVSWTALINGCLRNGRAVEALEC 191
Query: 121 LKEMWVLGLELSASTFVSVVSGCSFRQ----GISMHCCVYKLGLLNNEIPLANSVMSMYA 176
EM G+E+ T VSV+ + + G +H + G + ++ + ++++ MY+
Sbjct: 192 FVEMRSSGVEVDEVTIVSVLCAAAMLRDVWFGRWVHGFYVESGRVIWDVYVGSALVDMYS 251
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K G ++A +F+E+ ++VSW +I GYV EA + +M + P+ +
Sbjct: 252 KCGYCDDAVKVFNEMPTRNLVSWGALIAGYVQCNRYKEALKVFQEMIIEGIEPNQSTVTS 311
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
+ CAQ+G+L +H + +S L LV MY+KCG ++ A VF+ + K
Sbjct: 312 ALTACAQLGSLDQGRWLHEYVDRSKLGLNSKLGTALVDMYSKCGCVDEALLVFEKLPAKD 371
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEE 356
V+ WT+MI G A G ++NLF +++++ V+PN T LSACA G + +G E+
Sbjct: 372 VYPWTAMINGLAMRGDALSSLNLFSQMIRSRVQPNGVTFLGVLSACAHGGLVDEGLELFR 431
Query: 357 YIVLN-GLESNRQVQTSLIHMFSKCGRINKAKEVFERVP-DKDLAVWSAMINGYAIHG-- 412
++ + LE N ++ + + GR+ +A + E +P + VW A+ +G IH
Sbjct: 432 LMICDYRLEPNVDHYGCMVDLLGRAGRLEEAIKFIESMPMEPTPGVWGALFSGCMIHKAF 491
Query: 413 -MGDQALNLFYKMQ 425
+G+ N K+Q
Sbjct: 492 ELGEHIGNHLIKLQ 505
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 88/315 (27%), Positives = 157/315 (49%), Gaps = 6/315 (1%)
Query: 187 IFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGN 246
+FD + I W TII G+ +++R V PD F L+ +++ N
Sbjct: 60 LFDRLATPYIFLWNTIIRGFSASSQPQMVLVAYSRLRNHGVIPDRHTFPLLLKAFSKLRN 119
Query: 247 LFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGG 306
++ ++K G + + + N LVS + CG ++ +RR+F +K V WT++I G
Sbjct: 120 EN-PFQFYAHIVKFGLDFDAFVQNSLVSAFAHCGYVDCSRRLFIETAKKDVVSWTALING 178
Query: 307 YAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNG-LES 365
+ G EA+ F + + V +E T+ + L A A L + G+ + + V +G +
Sbjct: 179 CLRNGRAVEALECFVEMRSSGVEVDEVTIVSVLCAAAMLRDVWFGRWVHGFYVESGRVIW 238
Query: 366 NRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQ 425
+ V ++L+ M+SKCG + A +VF +P ++L W A+I GY +AL +F +M
Sbjct: 239 DVYVGSALVDMYSKCGYCDDAVKVFNEMPTRNLVSWGALIAGYVQCNRYKEALKVFQEMI 298
Query: 426 HVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSM-QSNFGIEPSIEHYLCLVDLLGRAG 484
+EG++P+ TS L+AC+ G +D G + + +S G+ + LVD+ + G
Sbjct: 299 -IEGIEPNQSTVTSALTACAQLGSLDQGRWLHEYVDRSKLGLNSKLG--TALVDMYSKCG 355
Query: 485 RFDLALKTIHEMPVE 499
D AL ++P +
Sbjct: 356 CVDEALLVFEKLPAK 370
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 128/277 (46%), Gaps = 15/277 (5%)
Query: 229 PDLVVFLNLILGCAQVGNLFLALSMH-SLLLKSGYNNEDPLDNLLVSMYTKCGDLELARR 287
P L + IL C F L S+L+ SG + + ++ TK DL
Sbjct: 2 PKLATLRHSILCCFHKCGTFDHLKQTTSILITSGLAHHTFFLSDILRSATK--DLGYTLL 59
Query: 288 VFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGS 347
+FD + +FLW ++I G++ P + + RL V P+ T L A ++L +
Sbjct: 60 LFDRLATPYIFLWNTIIRGFSASSQPQMVLVAYSRLRNHGVIPDRHTFPLLLKAFSKLRN 119
Query: 348 LSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMING 407
+ +IV GL+ + VQ SL+ F+ CG ++ ++ +F KD+ W+A+ING
Sbjct: 120 -ENPFQFYAHIVKFGLDFDAFVQNSLVSAFAHCGYVDCSRRLFIETAKKDVVSWTALING 178
Query: 408 YAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIE 467
+G +AL F +M+ G++ D V S+L A + M+ D +F F +E
Sbjct: 179 CLRNGRAVEALECFVEMRS-SGVEVDEVTIVSVLCA---AAMLRD--VWFGRWVHGFYVE 232
Query: 468 PS---IEHYL--CLVDLLGRAGRFDLALKTIHEMPVE 499
+ Y+ LVD+ + G D A+K +EMP
Sbjct: 233 SGRVIWDVYVGSALVDMYSKCGYCDDAVKVFNEMPTR 269
>gi|30693150|ref|NP_190486.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75222188|sp|Q5G1T1.1|PP272_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g49170, chloroplastic; AltName: Full=Protein EMBRYO
DEFECTIVE 2261; Flags: Precursor
gi|58013018|gb|AAW62962.1| embryo-defective 2261 [Arabidopsis thaliana]
gi|58013020|gb|AAW62963.1| embryo-defective 2261 [Arabidopsis thaliana]
gi|332644986|gb|AEE78507.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 850
Score = 332 bits (851), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 200/626 (31%), Positives = 332/626 (53%), Gaps = 17/626 (2%)
Query: 7 NNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG-FQQDA 65
NNG + + + L+ G+ N + + V++AC+N + + G+ ++K G F+ D
Sbjct: 143 NNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDV 202
Query: 66 FVQTGLIDMYSKCSD-FVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEM 124
V LIDM+ K + F ++ KV D+M +VV+W +I+ + EAI +M
Sbjct: 203 CVGCSLIDMFVKGENSFENAYKVFDKMSEL--NVVTWTLMITRCMQMGFPREAIRFFLDM 260
Query: 125 WVLGLELSASTFVSVVSGCSFRQGISM----HCCVYKLGLLNNEIPLANSVMSMYAKF-- 178
+ G E T SV S C+ + +S+ H + GL+++ + S++ MYAK
Sbjct: 261 VLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDD---VECSLVDMYAKCSA 317
Query: 179 -GKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNV-NEAFGLCNQM-RRMSVTPDLVVFL 235
G V++ R +FD + + S++SWT +I GY+ N+ EA L ++M + V P+ F
Sbjct: 318 DGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFS 377
Query: 236 NLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEK 295
+ C + + + + K G + + N ++SM+ K +E A+R F+++ EK
Sbjct: 378 SAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEK 437
Query: 296 SVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIE 355
++ + + + G + +A L + + + + T A+ LS A +GS+ KG++I
Sbjct: 438 NLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIH 497
Query: 356 EYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGD 415
+V GL N+ V +LI M+SKCG I+ A VF + ++++ W++MI G+A HG
Sbjct: 498 SQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAI 557
Query: 416 QALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLC 475
+ L F +M EG+KP+ V Y +ILSACSH G+V +G F SM + I+P +EHY C
Sbjct: 558 RVLETFNQMIE-EGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYAC 616
Query: 476 LVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGS 535
+VDLL RAG A + I+ MP + VW L AC H N ELG+ AA+ +L L+P
Sbjct: 617 MVDLLCRAGLLTDAFEFINTMPFQADVLVWRTFLGACRVHSNTELGKLAARKILELDPNE 676
Query: 536 TGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLS 595
YI ++N++ AG W+E+ R M +R L KE G S +E+ + F GD +H +
Sbjct: 677 PAAYIQLSNIYACAGKWEESTEMRRKMKERNLVKEGGCSWIEVGDKIHKFYVGDTAHPNA 736
Query: 596 VDIRKTLKELHIKLLEAGYIAEADIV 621
I L L ++ GY+ + D+V
Sbjct: 737 HQIYDELDRLITEIKRCGYVPDTDLV 762
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 141/529 (26%), Positives = 243/529 (45%), Gaps = 21/529 (3%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHG-NSFTFPLVLKACANINSIWDGKRVHSHVLKV 59
+I N G +S M + G+ +S TF +LK+C GK VH+ +++
Sbjct: 32 LILRHLNAGDLRGAVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEF 91
Query: 60 GFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEM-PVRLRSVVSWNSIISAHSRACLNDEAI 118
+ D+ + LI +YSK D + V + M R VVSW+++++ + +AI
Sbjct: 92 DIEPDSVLYNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAI 151
Query: 119 LVLKEMWVLGLELSASTFVSVVSGCSFRQGISMHCC----VYKLGLLNNEIPLANSVMSM 174
V E LGL + + +V+ CS + + + K G +++ + S++ M
Sbjct: 152 KVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDM 211
Query: 175 YAKFGKVNE-ARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVV 233
+ K E A +FD++ E ++V+WT +I + +G EA M D
Sbjct: 212 FVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFT 271
Query: 234 FLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKC---GDLELARRVFD 290
++ CA++ NL L +HS ++SG D ++ LV MY KC G ++ R+VFD
Sbjct: 272 LSSVFSACAELENLSLGKQLHSWAIRSGL--VDDVECSLVDMYAKCSADGSVDDCRKVFD 329
Query: 291 AVLEKSVFLWTSMIGGYAQ-LGYPSEAVNLFKRLL-KTSVRPNEATLATTLSACAELGSL 348
+ + SV WT++I GY + +EA+NLF ++ + V PN T ++ AC L
Sbjct: 330 RMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDP 389
Query: 349 SKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGY 408
GK++ GL SN V S+I MF K R+ A+ FE + +K+L ++ ++G
Sbjct: 390 RVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGT 449
Query: 409 AIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEP 468
+ +QA L ++ E L A + S+LS ++ G + G S G+
Sbjct: 450 CRNLNFEQAFKLLSEITERE-LGVSAFTFASLLSGVANVGSIRKGEQ-IHSQVVKLGL-- 505
Query: 469 SIEHYLC--LVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKH 515
S +C L+ + + G D A + + M W +++ KH
Sbjct: 506 SCNQPVCNALISMYSKCGSIDTASRVFNFME-NRNVISWTSMITGFAKH 553
>gi|357140731|ref|XP_003571917.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Brachypodium distachyon]
Length = 695
Score = 332 bits (851), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 196/602 (32%), Positives = 325/602 (53%), Gaps = 11/602 (1%)
Query: 28 GNSFTFPLVLKACANINSIWDGKRVHSH-VLKVGFQQDAFVQTGLIDMYSKCSDFVSSRK 86
S L++C + G+ +H+ VL F+ LI MYS C+D S+ +
Sbjct: 15 ATSLRLAAPLQSCGRAGDLRLGRCLHARLVLSGAAAASTFLANHLITMYSHCADVPSAVR 74
Query: 87 VLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELS----ASTFVSVVSG 142
+ D MP ++VSW +++S ++ ++ +A+ M GL + +S + +
Sbjct: 75 LFDAMP--RPNLVSWTTLVSGLTQNSMHRDALAAFSSMCRAGLVPTQFALSSAARAAAAL 132
Query: 143 CSFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTI 202
+ G +HC +LG + E+ +A+++ MY+K G + EA +FD++ + V+WT +
Sbjct: 133 AARHAGAQLHCVGVRLGF-DAELFVASNLADMYSKSGLLVEACRVFDQMPQKDAVAWTAM 191
Query: 203 IGGYVNVGNVNEAFGLCNQMRRMS-VTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSG 261
I GY GN+ A MRR V D V +++ + + +LA ++HS ++KSG
Sbjct: 192 IDGYAKNGNLEAAVIAFRDMRREGLVGADQHVLCSVLSASGGLKDGWLARAIHSCVMKSG 251
Query: 262 YNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEK-SVFLWTSMIGGYAQLGYPSEAVNLF 320
+ E + N L MY K D++ A RV +V TS+I GY + +A+ +F
Sbjct: 252 FEQEVAVRNALTDMYAKAADMDNAARVVKIDQGSLNVVSATSLIDGYIETDCIEKALLMF 311
Query: 321 KRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKC 380
L + V PNE T ++ + CA L +G ++ ++ L S+ V ++L+ M+ KC
Sbjct: 312 IELRRQGVEPNEFTFSSMIKGCAMQALLEQGAQLHAEVIKTSLISDSFVSSTLLDMYGKC 371
Query: 381 GRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSI 440
G I+ + ++F+ + W+A IN A HG G +A+ F +M G++P+ + + S+
Sbjct: 372 GLISLSIQLFKEIEYHTDIAWNAAINVLAQHGHGREAIRAFDRMTS-SGIRPNHITFVSL 430
Query: 441 LSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEV 500
L+ACSH+G+VD+GL +F SM+ + GIEP EHY C++D+ GRAGR D A K I EMPV+
Sbjct: 431 LTACSHAGLVDEGLKYFYSMKDHHGIEPKGEHYSCIIDMYGRAGRLDEAEKFIGEMPVKP 490
Query: 501 QAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARG 560
A W LL AC N ELGE AA N++ L P +TG ++ ++ ++ S G W++ R
Sbjct: 491 NAYGWCSLLGACRMRGNKELGEIAADNMMKLEPDNTGVHVSLSGIYASLGQWEDVKAVRK 550
Query: 561 LMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKELHIKLLEAGYIAEADI 620
LM D R+ K PG+S V+ + VF + D SH I + L+EL+ ++ E GY+ +
Sbjct: 551 LMRDNRIKKLPGFSWVDSNKKTHVFGSEDWSHPQQEKIYEKLEELYERIKEEGYVPDTRF 610
Query: 621 VP 622
+P
Sbjct: 611 LP 612
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 124/470 (26%), Positives = 232/470 (49%), Gaps = 21/470 (4%)
Query: 6 TNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDA 65
T N + L+ +SSM + G+ F +A A + + G ++H +++GF +
Sbjct: 95 TQNSMHRDALAAFSSMCRAGLVPTQFALSSAARAAAALAARHAGAQLHCVGVRLGFDAEL 154
Query: 66 FVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMW 125
FV + L DMYSK V + +V D+MP + V+W ++I +++ + A++ ++M
Sbjct: 155 FVASNLADMYSKSGLLVEACRVFDQMP--QKDAVAWTAMIDGYAKNGNLEAAVIAFRDMR 212
Query: 126 VLGL-ELSASTFVSVVSGC-SFRQG---ISMHCCVYKLGLLNNEIPLANSVMSMYAKFGK 180
GL SV+S + G ++H CV K G E+ + N++ MYAK
Sbjct: 213 REGLVGADQHVLCSVLSASGGLKDGWLARAIHSCVMKSG-FEQEVAVRNALTDMYAKAAD 271
Query: 181 V-NEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLIL 239
+ N AR + + G ++VS T++I GY+ + +A + ++RR V P+ F ++I
Sbjct: 272 MDNAARVVKIDQGSLNVVSATSLIDGYIETDCIEKALLMFIELRRQGVEPNEFTFSSMIK 331
Query: 240 GCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFL 299
GCA L +H+ ++K+ ++ + + L+ MY KCG + L+ ++F + +
Sbjct: 332 GCAMQALLEQGAQLHAEVIKTSLISDSFVSSTLLDMYGKCGLISLSIQLFKEIEYHTDIA 391
Query: 300 WTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKG-KEIEEYI 358
W + I AQ G+ EA+ F R+ + +RPN T + L+AC+ G + +G K
Sbjct: 392 WNAAINVLAQHGHGREAIRAFDRMTSSGIRPNHITFVSLLTACSHAGLVDEGLKYFYSMK 451
Query: 359 VLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAV-WSAMINGYAIHG---MG 414
+G+E + + +I M+ + GR+++A++ +P K A W +++ + G +G
Sbjct: 452 DHHGIEPKGEHYSCIIDMYGRAGRLDEAEKFIGEMPVKPNAYGWCSLLGACRMRGNKELG 511
Query: 415 DQALNLFYKMQHVEGLKPDAV-VYTSILSACSHSGMVDDGLSFFKSMQSN 463
+ A + K L+PD V+ S+ + G +D + K M+ N
Sbjct: 512 EIAADNMMK------LEPDNTGVHVSLSGIYASLGQWEDVKAVRKLMRDN 555
>gi|356503988|ref|XP_003520781.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Glycine max]
Length = 771
Score = 332 bits (851), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 185/589 (31%), Positives = 315/589 (53%), Gaps = 8/589 (1%)
Query: 36 VLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRL 95
+L A + S+ ++HS ++ L+ +Y+KC + + + P
Sbjct: 103 LLNNAAKLKSLKHATQIHSQLVTTNNHASLANINTLLLLYAKCGSIHHTLLLFNTYPHPS 162
Query: 96 RSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCS----FRQGISM 151
+VV+W ++I+ SR+ +A+ M G+ + TF +++ C+ +G +
Sbjct: 163 TNVVTWTTLINQLSRSNKPFQALTFFNRMRTTGIYPNHFTFSAILPACAHAALLSEGQQI 222
Query: 152 HCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGN 211
H ++K LN+ +A +++ MYAK G + A ++FDE+ ++VSW ++I G+V
Sbjct: 223 HALIHKHCFLNDPF-VATALLDMYAKCGSMLLAENVFDEMPHRNLVSWNSMIVGFVKNKL 281
Query: 212 VNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNL 271
A G+ ++ +S+ PD V +++ CA + L +H ++K G + N
Sbjct: 282 YGRAIGVFREV--LSLGPDQVSISSVLSACAGLVELDFGKQVHGSIVKRGLVGLVYVKNS 339
Query: 272 LVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPN 331
LV MY KCG E A ++F ++ V W MI G + +A F+ +++ V P+
Sbjct: 340 LVDMYCKCGLFEDATKLFCGGGDRDVVTWNVMIMGCFRCRNFEQACTYFQAMIREGVEPD 399
Query: 332 EATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFE 391
EA+ ++ A A + +L++G I +++ G N ++ +SL+ M+ KCG + A +VF
Sbjct: 400 EASYSSLFHASASIAALTQGTMIHSHVLKTGHVKNSRISSSLVTMYGKCGSMLDAYQVFR 459
Query: 392 RVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVD 451
+ ++ W+AMI + HG ++A+ LF +M + EG+ P+ + + S+LSACSH+G +D
Sbjct: 460 ETKEHNVVCWTAMITVFHQHGCANEAIKLFEEMLN-EGVVPEYITFVSVLSACSHTGKID 518
Query: 452 DGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSA 511
DG +F SM + I+P +EHY C+VDLLGR GR + A + I MP E + VW LL A
Sbjct: 519 DGFKYFNSMANVHNIKPGLEHYACMVDLLGRVGRLEEACRFIESMPFEPDSLVWGALLGA 578
Query: 512 CMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEP 571
C KH NVE+G A+ L L P + GNY+L++N++ GM +EA R LM + KE
Sbjct: 579 CGKHANVEMGREVAERLFKLEPDNPGNYMLLSNIYIRHGMLEEADEVRRLMGINGVRKES 638
Query: 572 GWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKELHIKLLEAGYIAEADI 620
G S +++ VF A DRSH + +I L++L + GY+AE
Sbjct: 639 GCSWIDVKNRTFVFNANDRSHSRTQEIYGMLQKLKELIKRRGYVAETQF 687
Score = 201 bits (512), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 131/428 (30%), Positives = 217/428 (50%), Gaps = 11/428 (2%)
Query: 5 STNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQD 64
S +N F+ L+ ++ M TG++ N FTF +L ACA+ + +G+++H+ + K F D
Sbjct: 176 SRSNKPFQ-ALTFFNRMRTTGIYPNHFTFSAILPACAHAALLSEGQQIHALIHKHCFLND 234
Query: 65 AFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEM 124
FV T L+DMY+KC + + V DEMP R++VSWNS+I + L AI V +E+
Sbjct: 235 PFVATALLDMYAKCGSMLLAENVFDEMP--HRNLVSWNSMIVGFVKNKLYGRAIGVFREV 292
Query: 125 WVLGL-ELSASTFVSVVSG-CSFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVN 182
LG ++S S+ +S +G G +H + K GL+ + + NS++ MY K G
Sbjct: 293 LSLGPDQVSISSVLSACAGLVELDFGKQVHGSIVKRGLV-GLVYVKNSLVDMYCKCGLFE 351
Query: 183 EARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCA 242
+A +F G+ +V+W +I G N +A M R V PD + +L A
Sbjct: 352 DATKLFCGGGDRDVVTWNVMIMGCFRCRNFEQACTYFQAMIREGVEPDEASYSSLFHASA 411
Query: 243 QVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTS 302
+ L +HS +LK+G+ + + LV+MY KCG + A +VF E +V WT+
Sbjct: 412 SIAALTQGTMIHSHVLKTGHVKNSRISSSLVTMYGKCGSMLDAYQVFRETKEHNVVCWTA 471
Query: 303 MIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKG-KEIEEYIVLN 361
MI + Q G +EA+ LF+ +L V P T + LSAC+ G + G K ++
Sbjct: 472 MITVFHQHGCANEAIKLFEEMLNEGVVPEYITFVSVLSACSHTGKIDDGFKYFNSMANVH 531
Query: 362 GLESNRQVQTSLIHMFSKCGRINKAKEVFERVP-DKDLAVWSAMINGYAIHG---MGDQA 417
++ + ++ + + GR+ +A E +P + D VW A++ H MG +
Sbjct: 532 NIKPGLEHYACMVDLLGRVGRLEEACRFIESMPFEPDSLVWGALLGACGKHANVEMGREV 591
Query: 418 LNLFYKMQ 425
+K++
Sbjct: 592 AERLFKLE 599
Score = 117 bits (292), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 85/278 (30%), Positives = 145/278 (52%), Gaps = 19/278 (6%)
Query: 221 QMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNL--LVSMYTK 278
+ + S PDL LN A++ +L A +HS L+ + NN L N+ L+ +Y K
Sbjct: 90 KFHQFSSVPDLKHLLN---NAAKLKSLKHATQIHSQLVTT--NNHASLANINTLLLLYAK 144
Query: 279 CGDLELARRVFDAVLEKS--VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLA 336
CG + +F+ S V WT++I ++ P +A+ F R+ T + PN T +
Sbjct: 145 CGSIHHTLLLFNTYPHPSTNVVTWTTLINQLSRSNKPFQALTFFNRMRTTGIYPNHFTFS 204
Query: 337 TTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDK 396
L ACA LS+G++I I + ++ V T+L+ M++KCG + A+ VF+ +P +
Sbjct: 205 AILPACAHAALLSEGQQIHALIHKHCFLNDPFVATALLDMYAKCGSMLLAENVFDEMPHR 264
Query: 397 DLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSF 456
+L W++MI G+ + + +A+ +F + V L PD V +S+LSAC +G+V+ L F
Sbjct: 265 NLVSWNSMIVGFVKNKLYGRAIGVF---REVLSLGPDQVSISSVLSAC--AGLVE--LDF 317
Query: 457 FKSMQSNF---GIEPSIEHYLCLVDLLGRAGRFDLALK 491
K + + G+ + LVD+ + G F+ A K
Sbjct: 318 GKQVHGSIVKRGLVGLVYVKNSLVDMYCKCGLFEDATK 355
>gi|449521571|ref|XP_004167803.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22150,
chloroplastic-like [Cucumis sativus]
Length = 817
Score = 332 bits (851), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 201/616 (32%), Positives = 332/616 (53%), Gaps = 17/616 (2%)
Query: 11 FEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG--FQQDAFVQ 68
+ E + +S M++ G+ + +F V A +++ + VH ++K+G + D +V
Sbjct: 191 YAEAVKQFSMMMKIGIKPSPVSFVNVFPAFSSLGDFKNANVVHGMLVKLGSEYVNDLYVV 250
Query: 69 TGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAI-LVLKEMWVL 127
+ I MY++ ++KV D R V WN++ISA + + E I L + +
Sbjct: 251 SSAIFMYAELGCLEFAKKVFDNCLERNTEV--WNTMISAFVQNNFSLEGIQLFFQAVESE 308
Query: 128 GLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNE 183
+ T +S +S S F +H V K + ++ + N++++MY++ ++
Sbjct: 309 DAAIDEVTLLSAISAASHLQKFELAEQLHAFVIK-NVAVTQVCVMNALIAMYSRCNSIDT 367
Query: 184 ARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQ 243
+ IFD + E +VSW T+I +V G +EA L +M++ + D V L+ +
Sbjct: 368 SFKIFDNMPEKDVVSWNTMISAFVQNGLNDEALMLFYEMKKQDLMVDSVTVTALLSAASD 427
Query: 244 VGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVL--EKSVFLWT 301
+ N + H LL++G E +D+ L+ MY K G +E A+ VF+ E+ W
Sbjct: 428 LRNPDIGKQTHGYLLRNGIQFEG-MDSYLIDMYAKSGLIEAAQNVFEKSFSHERDQATWN 486
Query: 302 SMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLN 361
SM+ GY Q G +A + +++L V PN TLA+ L AC G + GK++ + + N
Sbjct: 487 SMMSGYTQNGLVDQAFLILRQMLDQKVMPNVVTLASILPACNPSGYIDWGKQLHGFSIRN 546
Query: 362 GLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLF 421
L+ N V T+LI M+SK G I A+ VF + +K + +S MI GY HGMG+ AL +F
Sbjct: 547 DLDQNVFVATALIDMYSKSGSIAHAENVFSKANEKSIVTYSTMILGYGQHGMGESALFMF 606
Query: 422 YKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLG 481
++MQ G++PDAV ++LSACS++G+VD+GL F+SM++ + I+PS EH+ C+ D+LG
Sbjct: 607 HRMQK-SGIQPDAVTLVAVLSACSYAGLVDEGLQIFESMRTVYNIQPSTEHFCCVADMLG 665
Query: 482 RAGRFDLALKTIHEMPVEVQA-QVWAPLLSACMKHHNVELGEYAAKNLLTLNP--GSTGN 538
RAGR D A + + + + ++W LL+AC H ELG+ AK LL + G TG
Sbjct: 666 RAGRVDKAYEFVIGLGEKGNVMEIWGSLLAACRIHKQFELGKLVAKKLLEMEKINGKTGY 725
Query: 539 YILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDI 598
++L++N++ W+ R M +R L KE G S +EI G + F + DR H S I
Sbjct: 726 HVLLSNIYAEERNWENVDIVRKQMRERGLKKETGSSWIEIAGYMNHFASKDRKHPQSDQI 785
Query: 599 RKTLKELHIKLLEAGY 614
L+EL +++ AGY
Sbjct: 786 YSMLEELLMEMKHAGY 801
Score = 202 bits (514), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 146/501 (29%), Positives = 250/501 (49%), Gaps = 38/501 (7%)
Query: 12 EETLSTYSSMLQTG--VHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQT 69
+E L YS+M + V +S+T+ VLKACA+ ++ GK VH+H L+ V
Sbjct: 76 DEALLFYSNMKSSSPQVKCDSYTYSSVLKACADTRNLVVGKAVHAHFLRCLMNPSRIVYN 135
Query: 70 GLIDMYSKCSDFVSS-------------RKVLDEMPVRLRSVVSWNSIISAHSRACLNDE 116
L++MYS CS RKV D M R R+VV+WN++I+ + R E
Sbjct: 136 SLLNMYSMCSSTTPDGKMVSGYSRCDLVRKVFDTM--RKRTVVAWNTLIAWYVRTERYAE 193
Query: 117 AILVLKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGL-LNNEIPLANSV 171
A+ M +G++ S +FV+V S F+ +H + KLG N++ + +S
Sbjct: 194 AVKQFSMMMKIGIKPSPVSFVNVFPAFSSLGDFKNANVVHGMLVKLGSEYVNDLYVVSSA 253
Query: 172 MSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQ-MRRMSVTPD 230
+ MYA+ G + A+ +FD E + W T+I +V E L Q + D
Sbjct: 254 IFMYAELGCLEFAKKVFDNCLERNTEVWNTMISAFVQNNFSLEGIQLFFQAVESEDAAID 313
Query: 231 LVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFD 290
V L+ I + + LA +H+ ++K+ + + N L++MY++C ++ + ++FD
Sbjct: 314 EVTLLSAISAASHLQKFELAEQLHAFVIKNVAVTQVCVMNALIAMYSRCNSIDTSFKIFD 373
Query: 291 AVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSK 350
+ EK V W +MI + Q G EA+ LF + K + + T+ LSA ++L +
Sbjct: 374 NMPEKDVVSWNTMISAFVQNGLNDEALMLFYEMKKQDLMVDSVTVTALLSAASDLRNPDI 433
Query: 351 GKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFER--VPDKDLAVWSAMINGY 408
GK+ Y++ NG++ + + LI M++K G I A+ VFE+ ++D A W++M++GY
Sbjct: 434 GKQTHGYLLRNGIQF-EGMDSYLIDMYAKSGLIEAAQNVFEKSFSHERDQATWNSMMSGY 492
Query: 409 AIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVD-----DGLSFFKSMQSN 463
+G+ DQA + +M + + P+ V SIL AC+ SG +D G S + N
Sbjct: 493 TQNGLVDQAFLILRQMLD-QKVMPNVVTLASILPACNPSGYIDWGKQLHGFSIRNDLDQN 551
Query: 464 FGIEPSIEHYLCLVDLLGRAG 484
+ + L+D+ ++G
Sbjct: 552 VFVATA------LIDMYSKSG 566
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 115/429 (26%), Positives = 219/429 (51%), Gaps = 30/429 (6%)
Query: 84 SRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSAS--TFVSVVS 141
+R++ D +P S V WN+II DEA+L M ++ T+ SV+
Sbjct: 47 ARQLFDALP--RPSTVLWNTIIIGLVCNNFPDEALLFYSNMKSSSPQVKCDSYTYSSVLK 104
Query: 142 GCSFRQ----GISMHCCVYKLGLLNNEIPLANSVMSMYAK-------------FGKVNEA 184
C+ + G ++H + L+N + NS+++MY+ + + +
Sbjct: 105 ACADTRNLVVGKAVHAHFLRC-LMNPSRIVYNSLLNMYSMCSSTTPDGKMVSGYSRCDLV 163
Query: 185 RSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQV 244
R +FD + + ++V+W T+I YV EA + M ++ + P V F+N+ + +
Sbjct: 164 RKVFDTMRKRTVVAWNTLIAWYVRTERYAEAVKQFSMMMKIGIKPSPVSFVNVFPAFSSL 223
Query: 245 GNLFLALSMHSLLLKSG--YNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTS 302
G+ A +H +L+K G Y N+ + + + MY + G LE A++VFD LE++ +W +
Sbjct: 224 GDFKNANVVHGMLVKLGSEYVNDLYVVSSAIFMYAELGCLEFAKKVFDNCLERNTEVWNT 283
Query: 303 MIGGYAQLGYPSEAVNLFKRLLKT-SVRPNEATLATTLSACAELGSLSKGKEIEEYIVLN 361
MI + Q + E + LF + +++ +E TL + +SA + L +++ +++ N
Sbjct: 284 MISAFVQNNFSLEGIQLFFQAVESEDAAIDEVTLLSAISAASHLQKFELAEQLHAFVIKN 343
Query: 362 GLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLF 421
+ V +LI M+S+C I+ + ++F+ +P+KD+ W+ MI+ + +G+ D+AL LF
Sbjct: 344 VAVTQVCVMNALIAMYSRCNSIDTSFKIFDNMPEKDVVSWNTMISAFVQNGLNDEALMLF 403
Query: 422 YKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIE-PSIEHYLCLVDLL 480
Y+M+ + L D+V T++LSA S D G + N GI+ ++ Y L+D+
Sbjct: 404 YEMKK-QDLMVDSVTVTALLSAASDLRNPDIGKQTHGYLLRN-GIQFEGMDSY--LIDMY 459
Query: 481 GRAGRFDLA 489
++G + A
Sbjct: 460 AKSGLIEAA 468
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 91/375 (24%), Positives = 167/375 (44%), Gaps = 27/375 (7%)
Query: 162 NNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQ 221
N +IP +S + G+++ AR +FD + S V W TII G V +EA +
Sbjct: 25 NPKIPTIRYRLSRLCQEGQLHLARQLFDALPRPSTVLWNTIIIGLVCNNFPDEALLFYSN 84
Query: 222 MRRMS--VTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKC 279
M+ S V D + +++ CA NL + ++H+ L+ N + N L++MY+ C
Sbjct: 85 MKSSSPQVKCDSYTYSSVLKACADTRNLVVGKAVHAHFLRCLMNPSRIVYNSLLNMYSMC 144
Query: 280 GDL-------------ELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKT 326
+L R+VFD + +++V W ++I Y + +EAV F ++K
Sbjct: 145 SSTTPDGKMVSGYSRCDLVRKVFDTMRKRTVVAWNTLIAWYVRTERYAEAVKQFSMMMKI 204
Query: 327 SVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLE--SNRQVQTSLIHMFSKCGRIN 384
++P+ + A + LG + +V G E ++ V +S I M+++ G +
Sbjct: 205 GIKPSPVSFVNVFPAFSSLGDFKNANVVHGMLVKLGSEYVNDLYVVSSAIFMYAELGCLE 264
Query: 385 KAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSAC 444
AK+VF+ +++ VW+ MI+ + + + + LF++ E D V S +SA
Sbjct: 265 FAKKVFDNCLERNTEVWNTMISAFVQNNFSLEGIQLFFQAVESEDAAIDEVTLLSAISAA 324
Query: 445 SHSGMVDDGLSFFKSMQSNFGIEPSIEHYLC----LVDLLGRAGRFDLALKTIHEMPVEV 500
SH + + N + +C L+ + R D + K MP E
Sbjct: 325 SHLQKFELAEQLHAFVIKNVAVTQ-----VCVMNALIAMYSRCNSIDTSFKIFDNMP-EK 378
Query: 501 QAQVWAPLLSACMKH 515
W ++SA +++
Sbjct: 379 DVVSWNTMISAFVQN 393
Score = 99.0 bits (245), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 129/248 (52%), Gaps = 4/248 (1%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI NG +E L + M + + +S T +L A +++ + GK+ H ++L+ G
Sbjct: 386 MISAFVQNGLNDEALMLFYEMKKQDLMVDSVTVTALLSAASDLRNPDIGKQTHGYLLRNG 445
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
Q + + + LIDMY+K +++ V ++ R +WNS++S +++ L D+A L+
Sbjct: 446 IQFEG-MDSYLIDMYAKSGLIEAAQNVFEKSFSHERDQATWNSMMSGYTQNGLVDQAFLI 504
Query: 121 LKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGL---LNNEIPLANSVMSMYAK 177
L++M + + T S++ C+ I ++ + L+ + +A +++ MY+K
Sbjct: 505 LRQMLDQKVMPNVVTLASILPACNPSGYIDWGKQLHGFSIRNDLDQNVFVATALIDMYSK 564
Query: 178 FGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNL 237
G + A ++F + E SIV+++T+I GY G A + ++M++ + PD V + +
Sbjct: 565 SGSIAHAENVFSKANEKSIVTYSTMILGYGQHGMGESALFMFHRMQKSGIQPDAVTLVAV 624
Query: 238 ILGCAQVG 245
+ C+ G
Sbjct: 625 LSACSYAG 632
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 126/272 (46%), Gaps = 22/272 (8%)
Query: 263 NNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKR 322
N + P +S + G L LAR++FDA+ S LW ++I G +P EA+ LF
Sbjct: 25 NPKIPTIRYRLSRLCQEGQLHLARQLFDALPRPSTVLWNTIIIGLVCNNFPDEAL-LFYS 83
Query: 323 LLKTS---VRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSK 379
+K+S V+ + T ++ L ACA+ +L GK + + + + +R V SL++M+S
Sbjct: 84 NMKSSSPQVKCDSYTYSSVLKACADTRNLVVGKAVHAHFLRCLMNPSRIVYNSLLNMYSM 143
Query: 380 C-------------GRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQH 426
C R + ++VF+ + + + W+ +I Y +A+ F M
Sbjct: 144 CSSTTPDGKMVSGYSRCDLVRKVFDTMRKRTVVAWNTLIAWYVRTERYAEAVKQFSMMMK 203
Query: 427 VEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLC--LVDLLGRAG 484
+ G+KP V + ++ A S G + + M G E + Y+ + + G
Sbjct: 204 I-GIKPSPVSFVNVFPAFSSLGDFKNA-NVVHGMLVKLGSEYVNDLYVVSSAIFMYAELG 261
Query: 485 RFDLALKTIHEMPVEVQAQVWAPLLSACMKHH 516
+ A K + + +E +VW ++SA ++++
Sbjct: 262 CLEFA-KKVFDNCLERNTEVWNTMISAFVQNN 292
>gi|359497290|ref|XP_002268807.2| PREDICTED: pentatricopeptide repeat-containing protein
At3g49710-like [Vitis vinifera]
Length = 719
Score = 332 bits (851), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 190/622 (30%), Positives = 329/622 (52%), Gaps = 41/622 (6%)
Query: 33 FPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRK------ 86
F +LK C + GK +HS +K + I +YSKC +RK
Sbjct: 11 FRHLLKTCIAERDLSTGKSLHSLYIKSFIPPSTYFSNHFILLYSKCGRLAWARKAFQDIS 70
Query: 87 -------------------------VLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVL 121
+ D++P +VS+N++ISA++ A+ +
Sbjct: 71 DPNVFSFNAIIAAYAKESRPLIAHQLFDQIPEP--DLVSYNTLISAYADCGETAPALGLF 128
Query: 122 KEMWVLGLELSASTFVSVVSGCSFRQGI--SMHCCVYKLGLLNNEIPLANSVMSMYAKFG 179
M +GL++ T +V++ C G+ +H G ++ + + N++++ Y K G
Sbjct: 129 SGMREMGLDMDGFTLSAVITACCDDVGLIGQLHSVAVSSGF-DSYVSVNNALLTYYGKNG 187
Query: 180 KVNEARSIFDEIGET-SIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLI 238
+++A+ +F +G VSW ++I Y ++A GL +M R + D+ +++
Sbjct: 188 DLDDAKRVFYGMGGIRDEVSWNSMIVAYGQHQEGSKALGLFQEMVRRGLNVDMFTLASVL 247
Query: 239 LGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGD-LELARRVFDAVLEKSV 297
+ +L L H L+K+G++ + + L+ +Y+KCG + R+VF+ + E +
Sbjct: 248 TAFTCLEDLSGGLQFHGQLIKTGFHQNSHVGSGLIDLYSKCGGGMSDCRKVFEEITEPDL 307
Query: 298 FLWTSMIGGYAQ-LGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEE 356
LW +M+ GY+Q + +A+ F+++ RPN+ + +SAC+ L S S+GK+I
Sbjct: 308 VLWNTMVSGYSQNEEFLEDALECFRQMQGIGYRPNDCSFVCVISACSNLSSPSQGKQIHS 367
Query: 357 YIVLNGLESNR-QVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGD 415
+ + + SNR V +LI M+SKCG + A+ +F+R+ + + ++MI GYA HG+
Sbjct: 368 LALKSDIPSNRISVDNALIAMYSKCGNLQDARRLFDRMAEHNTVSLNSMIAGYAQHGIEM 427
Query: 416 QALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLC 475
++L+LF M + + P ++ + S+LSAC+H+G V++G ++F M+ F IEP EHY C
Sbjct: 428 ESLHLFQWMLERQ-IAPTSITFISVLSACAHTGRVEEGWNYFNMMKEKFNIEPEAEHYSC 486
Query: 476 LVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGS 535
++DLLGRAG+ A I MP + WA LL AC H N+EL AA +L L P +
Sbjct: 487 MIDLLGRAGKLSEAENLIARMPFNPGSIGWASLLGACRTHGNIELAVKAANQVLQLEPSN 546
Query: 536 TGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLS 595
Y++++N++ SAG W+E AT R M DR + K+PG S +E+ + VFVA D SH +
Sbjct: 547 AAPYVVLSNMYASAGRWEEVATVRKFMRDRGVKKKPGCSWIEVKKRIHVFVAEDSSHPMI 606
Query: 596 VDIRKTLKELHIKLLEAGYIAE 617
+I + L+E+ K+ AGY+ +
Sbjct: 607 KEIYEFLEEMSGKMKRAGYVPD 628
Score = 168 bits (425), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 135/495 (27%), Positives = 230/495 (46%), Gaps = 49/495 (9%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+I + G L +S M + G+ + FT V+ AC + + ++HS + G
Sbjct: 111 LISAYADCGETAPALGLFSGMREMGLDMDGFTLSAVITACCDDVGLIG--QLHSVAVSSG 168
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F V L+ Y K D +++V M +R VSWNS+I A+ + +A+ +
Sbjct: 169 FDSYVSVNNALLTYYGKNGDLDDAKRVFYGMG-GIRDEVSWNSMIVAYGQHQEGSKALGL 227
Query: 121 LKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
+EM GL + T SV++ + G+ H + K G N + + ++ +Y+
Sbjct: 228 FQEMVRRGLNVDMFTLASVLTAFTCLEDLSGGLQFHGQLIKTGFHQNS-HVGSGLIDLYS 286
Query: 177 KF-GKVNEARSIFDEIGETSIVSWTTIIGGYV-NVGNVNEAFGLCNQMRRMSVTPDLVVF 234
K G +++ R +F+EI E +V W T++ GY N + +A QM+ + P+ F
Sbjct: 287 KCGGGMSDCRKVFEEITEPDLVLWNTMVSGYSQNEEFLEDALECFRQMQGIGYRPNDCSF 346
Query: 235 LNLILGCAQVGNLFLALSMHSLLLKSGY-NNEDPLDNLLVSMYTKCGDLELARRVFDAVL 293
+ +I C+ + + +HSL LKS +N +DN L++MY+KCG+L+ ARR+FD +
Sbjct: 347 VCVISACSNLSSPSQGKQIHSLALKSDIPSNRISVDNALIAMYSKCGNLQDARRLFDRMA 406
Query: 294 EKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKE 353
E + SMI GYAQ G E+++LF+ +L+ + P T + LSACA G + +G
Sbjct: 407 EHNTVSLNSMIAGYAQHGIEMESLHLFQWMLERQIAPTSITFISVLSACAHTGRVEEGWN 466
Query: 354 IEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGM 413
N KE F P+ + +S MI+ G
Sbjct: 467 Y----------------------------FNMMKEKFNIEPEAEH--YSCMIDLLGRAGK 496
Query: 414 GDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPS-IEH 472
+A NL +M P ++ + S+L AC G ++ + K+ +EPS
Sbjct: 497 LSEAENLIARMP----FNPGSIGWASLLGACRTHGNIELAV---KAANQVLQLEPSNAAP 549
Query: 473 YLCLVDLLGRAGRFD 487
Y+ L ++ AGR++
Sbjct: 550 YVVLSNMYASAGRWE 564
>gi|357113684|ref|XP_003558631.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Brachypodium distachyon]
Length = 802
Score = 332 bits (851), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 200/626 (31%), Positives = 316/626 (50%), Gaps = 74/626 (11%)
Query: 62 QQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVL 121
Q++ F L+ +Y+K +R V EMP R VSW ++ +R EAI +
Sbjct: 93 QRNVFTWNSLLSLYAKSGRLADARAVFAEMPER--DPVSWTVMVVGLNRVGRFGEAIKMF 150
Query: 122 KEMWVLGLELSASTFVSVVSGCSFRQ----GISMHCCVYKLGLLNNEIPLANSVMSMYAK 177
+M GL + T +V+S C+ + G +H V KLGL ++ +P+ANSV++MY K
Sbjct: 151 LDMVTDGLSPTQFTLTNVLSSCAATEARGVGRKVHSFVVKLGL-SSCVPVANSVLNMYGK 209
Query: 178 FGKVNEARSIFDEIGETS-------------------------------IVSWTTIIGGY 206
G AR++F+ + E S IVSW +I GY
Sbjct: 210 CGDAETARAVFERMPERSVSSWNAMVSLDAHLGRMDLALSLFENMPDRTIVSWNAVIAGY 269
Query: 207 VNVGNVNEAFGLCNQMRRMS-VTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNE 265
G +A ++M S + PD +++ CA +G + + +H+ +L+S
Sbjct: 270 NQNGLNAKALWFFSRMLSYSTMAPDEFTITSVLSACANLGMVSIGKQVHAYILRSRMPYI 329
Query: 266 DPLDNLLVSMYTKCG---------------------------------DLELARRVFDAV 292
+ N L+SMY K G D++ AR +FD +
Sbjct: 330 GQVTNALISMYAKSGSVENARGVMQQAVMADLNVISFTALLEGYVKLGDMKHAREMFDVM 389
Query: 293 LEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGK 352
+ V WT+MI GY Q G+ EA+ LF+ ++++ PN T+A LS CA L L GK
Sbjct: 390 SNRDVVAWTAMIVGYEQNGHNDEAMELFRLMIRSGPEPNSYTVAAVLSVCASLACLEYGK 449
Query: 353 EIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVP-DKDLAVWSAMINGYAIH 411
+I + + E + V S++ M+++ G + A+ VF+RV K+ W++MI A H
Sbjct: 450 QIHCKAIRSLQEQSSSVSNSIVTMYARSGSLPWARRVFDRVHWRKETVTWTSMIVALAQH 509
Query: 412 GMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIE 471
G+G+ A+ LF +M V G+KPD + + +LSAC+H G VD+G +F+ +Q GI P +
Sbjct: 510 GLGEDAVGLFEEMLRV-GVKPDRITFVGVLSACTHVGFVDEGKRYFQQLQDKHGIVPEMS 568
Query: 472 HYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTL 531
HY C+VDLL RAG F A + I +MPVE A W LLSAC H N +L E AA+ LL++
Sbjct: 569 HYACMVDLLARAGLFSEAQEFIQQMPVEPDAIAWGSLLSACRVHKNADLAELAAEKLLSI 628
Query: 532 NPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRS 591
+PG++G Y ++N++++ G W +AA D+ + KE G+S I V VF A D
Sbjct: 629 DPGNSGAYSALSNVYSACGRWNDAAKIWKRRKDKSVKKETGFSWTHIGNRVHVFGADDVL 688
Query: 592 HHLSVDIRKTLKELHIKLLEAGYIAE 617
H + +T ++ + +AG++ +
Sbjct: 689 HPQRDTVYRTAAKMWDDIKKAGFVPD 714
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 128/485 (26%), Positives = 214/485 (44%), Gaps = 83/485 (17%)
Query: 9 GSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQ 68
G F E + + M+ G+ FT VL +CA + G++VHS V+K+G V
Sbjct: 141 GRFGEAIKMFLDMVTDGLSPTQFTLTNVLSSCAATEARGVGRKVHSFVVKLGLSSCVPVA 200
Query: 69 TGLIDMYSKCSDFVSSRKVLDEMPVRL-----------------------------RSVV 99
+++MY KC D ++R V + MP R R++V
Sbjct: 201 NSVLNMYGKCGDAETARAVFERMPERSVSSWNAMVSLDAHLGRMDLALSLFENMPDRTIV 260
Query: 100 SWNSIISAHSRACLNDEAILVLKEMWVLGLELSAS-------TFVSVVSGCSFRQGISMH 152
SWN++I+ +++ LN +A +W LS S T SV+S C+ +S+
Sbjct: 261 SWNAVIAGYNQNGLNAKA------LWFFSRMLSYSTMAPDEFTITSVLSACANLGMVSIG 314
Query: 153 CCVYKLGLLNNEIP----LANSVMSMYAKFGKVNEARSI--------------------- 187
V+ +L + +P + N+++SMYAK G V AR +
Sbjct: 315 KQVHAY-ILRSRMPYIGQVTNALISMYAKSGSVENARGVMQQAVMADLNVISFTALLEGY 373
Query: 188 ------------FDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFL 235
FD + +V+WT +I GY G+ +EA L M R P+
Sbjct: 374 VKLGDMKHAREMFDVMSNRDVVAWTAMIVGYEQNGHNDEAMELFRLMIRSGPEPNSYTVA 433
Query: 236 NLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAV-LE 294
++ CA + L +H ++S + N +V+MY + G L ARRVFD V
Sbjct: 434 AVLSVCASLACLEYGKQIHCKAIRSLQEQSSSVSNSIVTMYARSGSLPWARRVFDRVHWR 493
Query: 295 KSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKE- 353
K WTSMI AQ G +AV LF+ +L+ V+P+ T LSAC +G + +GK
Sbjct: 494 KETVTWTSMIVALAQHGLGEDAVGLFEEMLRVGVKPDRITFVGVLSACTHVGFVDEGKRY 553
Query: 354 IEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVP-DKDLAVWSAMINGYAIHG 412
++ +G+ ++ + ++ G ++A+E +++P + D W ++++ +H
Sbjct: 554 FQQLQDKHGIVPEMSHYACMVDLLARAGLFSEAQEFIQQMPVEPDAIAWGSLLSACRVHK 613
Query: 413 MGDQA 417
D A
Sbjct: 614 NADLA 618
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 120/437 (27%), Positives = 204/437 (46%), Gaps = 79/437 (18%)
Query: 161 LNNEIPLA-------NSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVN 213
L +EIP A NS++S+YAK G++ +AR++F E+ E VSWT ++ G VG
Sbjct: 85 LFDEIPAAQRNVFTWNSLLSLYAKSGRLADARAVFAEMPERDPVSWTVMVVGLNRVGRFG 144
Query: 214 EAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLV 273
EA + M ++P N++ CA + +HS ++K G ++ P+ N ++
Sbjct: 145 EAIKMFLDMVTDGLSPTQFTLTNVLSSCAATEARGVGRKVHSFVVKLGLSSCVPVANSVL 204
Query: 274 SMYTKCGDLELARRVFDAVLEKSVFLWTSM------------------------------ 303
+MY KCGD E AR VF+ + E+SV W +M
Sbjct: 205 NMYGKCGDAETARAVFERMPERSVSSWNAMVSLDAHLGRMDLALSLFENMPDRTIVSWNA 264
Query: 304 -IGGYAQLGYPSEAVNLFKRLLK-TSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLN 361
I GY Q G ++A+ F R+L +++ P+E T+ + LSACA LG +S GK++ YI+ +
Sbjct: 265 VIAGYNQNGLNAKALWFFSRMLSYSTMAPDEFTITSVLSACANLGMVSIGKQVHAYILRS 324
Query: 362 GLESNRQVQTSLIHMFSKCGRINK---------------------------------AKE 388
+ QV +LI M++K G + A+E
Sbjct: 325 RMPYIGQVTNALISMYAKSGSVENARGVMQQAVMADLNVISFTALLEGYVKLGDMKHARE 384
Query: 389 VFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSG 448
+F+ + ++D+ W+AMI GY +G D+A+ LF M G +P++ ++LS C+
Sbjct: 385 MFDVMSNRDVVAWTAMIVGYEQNGHNDEAMELFRLMIR-SGPEPNSYTVAAVLSVCASLA 443
Query: 449 MVDDGLSFF-KSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAP 507
++ G K+++S S+ + +V + R+G A + + + W
Sbjct: 444 CLEYGKQIHCKAIRSLQEQSSSVSN--SIVTMYARSGSLPWARRVFDRVHWRKETVTWTS 501
Query: 508 LLSACMKHHNVELGEYA 524
++ A +H LGE A
Sbjct: 502 MIVALAQH---GLGEDA 515
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 72/311 (23%), Positives = 132/311 (42%), Gaps = 47/311 (15%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI NG +E + + M+++G NS+T VL CA++ + GK++H ++
Sbjct: 400 MIVGYEQNGHNDEAMELFRLMIRSGPEPNSYTVAAVLSVCASLACLEYGKQIHCKAIRSL 459
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+Q + V ++ MY++ +R+V D + R + V+W S+I A ++ L ++A+ +
Sbjct: 460 QEQSSSVSNSIVTMYARSGSLPWARRVFDRVHWR-KETVTWTSMIVALAQHGLGEDAVGL 518
Query: 121 LKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGK 180
+EM +G++ TFV V+S C+ G
Sbjct: 519 FEEMLRVGVKPDRITFVGVLSACT--------------------------------HVGF 546
Query: 181 VNEARSIFDEIGET-----SIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFL 235
V+E + F ++ + + + ++ G +EA Q M V PD + +
Sbjct: 547 VDEGKRYFQQLQDKHGIVPEMSHYACMVDLLARAGLFSEAQEFIQQ---MPVEPDAIAWG 603
Query: 236 NLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEK 295
+L+ C N LA LL N + L ++Y+ CG A +++ +K
Sbjct: 604 SLLSACRVHKNADLAELAAEKLLSIDPGNSGAY-SALSNVYSACGRWNDAAKIWKRRKDK 662
Query: 296 SV-----FLWT 301
SV F WT
Sbjct: 663 SVKKETGFSWT 673
>gi|449476227|ref|XP_004154678.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g22410, mitochondrial-like [Cucumis sativus]
Length = 681
Score = 332 bits (851), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 205/622 (32%), Positives = 326/622 (52%), Gaps = 59/622 (9%)
Query: 36 VLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRL 95
+L+AC ++ + K +H+ ++ G D F + L+ C+ +S + LD L
Sbjct: 60 LLEACTSMAKM---KEIHAQMISTGLISDGFALSRLVAF---CA--ISEWRNLDYCDKIL 111
Query: 96 RSVV-----SWNSIISAHSRACLNDEAILVLKEMWVLGLELSAS-TFVSVVSGCSFRQGI 149
+ SWN I + + A+L+ + M G + + T+ + C+ G
Sbjct: 112 NNAANLNXFSWNMAIRGYVESENPINAVLLYRNMLRKGSAIPDNYTYPLLFKVCA---GF 168
Query: 150 SMHCC-------VYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTI 202
S+ V +LG ++++ + N+++ + G++ AR +FDE +VSW +I
Sbjct: 169 SLSWTANEILGHVIQLGF-DSDLFVHNAIIHVLVSCGELLAARKLFDESCVRDLVSWNSI 227
Query: 203 IGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGY 262
I GYV G +EAF L +M ++V PD V + ++ AQ+ NL L +H + + G
Sbjct: 228 INGYVRCGLADEAFDLYYKMGELNVMPDEVTMIGVVSASAQLENLALGRKLHQSIEEMGL 287
Query: 263 NNEDPLDNLLVSMYTKCGDLELAR-------------------------------RVFDA 291
N PL N L+ MY KC ++E A+ R+F+
Sbjct: 288 NLTVPLANALMDMYIKCKNIEAAKILFENMTKKTVVSWTTMVIGYAKFGLLESAVRLFNE 347
Query: 292 VLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKG 351
+ EK V LW ++IGG+ Q EA+ LF + +SV P++ T+ LSAC++LG+L G
Sbjct: 348 MPEKDVVLWNALIGGFVQAKRSKEALALFHEMQASSVAPDKITVVNCLSACSQLGALDVG 407
Query: 352 KEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIH 411
+ Y+ + L N + T+L+ M++KCG I KA +VFE +P ++ W+A+I G A+H
Sbjct: 408 IWMHHYVDKHNLTMNVALGTALVDMYAKCGNIKKAIQVFEEMPGRNSLTWTAIICGLALH 467
Query: 412 GMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIE 471
G A++ F +M + GL PD + + +LSAC H G+VD G +F M S +GI P ++
Sbjct: 468 GQPHAAISYFSEMISI-GLVPDEITFIGVLSACCHGGLVDQGRDYFYQMTSKYGISPKLK 526
Query: 472 HYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTL 531
HY CLVDLLGRAG + A + I MP E A VW L H NV +GE AA LL L
Sbjct: 527 HYSCLVDLLGRAGFLEEAEELIRSMPFEPDAVVWGALFFGSRIHGNVHMGERAASKLLEL 586
Query: 532 NPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRS 591
+P G Y+L+AN++ A MW++A R +M++R + K PG S +E++G V F+ D+S
Sbjct: 587 DPHDGGIYVLLANMYGDANMWEQARKVRKMMEERGVEKTPGCSSIEMNGLVYDFIIRDKS 646
Query: 592 HHLSVDIRKTLKEL--HIKLLE 611
H S I + L L I+++E
Sbjct: 647 HPQSEKIYECLTRLTRQIEVIE 668
Score = 213 bits (541), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 133/453 (29%), Positives = 225/453 (49%), Gaps = 44/453 (9%)
Query: 18 YSSMLQTG-VHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYS 76
Y +ML+ G +++T+PL+ K CA + W + HV+++GF D FV +I +
Sbjct: 142 YRNMLRKGSAIPDNYTYPLLFKVCAGFSLSWTANEILGHVIQLGFDSDLFVHNAIIHVLV 201
Query: 77 KCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTF 136
C + +++RK+ DE V R +VSWNSII+ + R L DEA + +M L + T
Sbjct: 202 SCGELLAARKLFDESCV--RDLVSWNSIINGYVRCGLADEAFDLYYKMGELNVMPDEVTM 259
Query: 137 VSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSM------------------ 174
+ VVS + G +H + ++G LN +PLAN++M M
Sbjct: 260 IGVVSASAQLENLALGRKLHQSIEEMG-LNLTVPLANALMDMYIKCKNIEAAKILFENMT 318
Query: 175 -------------YAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQ 221
YAKFG + A +F+E+ E +V W +IGG+V EA L ++
Sbjct: 319 KKTVVSWTTMVIGYAKFGLLESAVRLFNEMPEKDVVLWNALIGGFVQAKRSKEALALFHE 378
Query: 222 MRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGD 281
M+ SV PD + +N + C+Q+G L + + MH + K L LV MY KCG+
Sbjct: 379 MQASSVAPDKITVVNCLSACSQLGALDVGIWMHHYVDKHNLTMNVALGTALVDMYAKCGN 438
Query: 282 LELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSA 341
++ A +VF+ + ++ WT++I G A G P A++ F ++ + P+E T LSA
Sbjct: 439 IKKAIQVFEEMPGRNSLTWTAIICGLALHGQPHAAISYFSEMISIGLVPDEITFIGVLSA 498
Query: 342 CAELGSLSKGKE-IEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVP-DKDLA 399
C G + +G++ + G+ + + L+ + + G + +A+E+ +P + D
Sbjct: 499 CCHGGLVDQGRDYFYQMTSKYGISPKLKHYSCLVDLLGRAGFLEEAEELIRSMPFEPDAV 558
Query: 400 VWSAMINGYAIHG---MGDQALNLFYKMQHVEG 429
VW A+ G IHG MG++A + ++ +G
Sbjct: 559 VWGALFFGSRIHGNVHMGERAASKLLELDPHDG 591
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 78/333 (23%), Positives = 144/333 (43%), Gaps = 36/333 (10%)
Query: 9 GSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQ 68
G +E Y M + V + T V+ A A + ++ G+++H + ++G +
Sbjct: 235 GLADEAFDLYYKMGELNVMPDEVTMIGVVSASAQLENLALGRKLHQSIEEMGLNLTVPLA 294
Query: 69 TGLIDMYSKCSDFVSSRKVLDEM-----------------------PVRL------RSVV 99
L+DMY KC + +++ + + M VRL + VV
Sbjct: 295 NALMDMYIKCKNIEAAKILFENMTKKTVVSWTTMVIGYAKFGLLESAVRLFNEMPEKDVV 354
Query: 100 SWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCV 155
WN++I +A + EA+ + EM + T V+ +S CS GI MH V
Sbjct: 355 LWNALIGGFVQAKRSKEALALFHEMQASSVAPDKITVVNCLSACSQLGALDVGIWMHHYV 414
Query: 156 YKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEA 215
K L N + L +++ MYAK G + +A +F+E+ + ++WT II G G + A
Sbjct: 415 DKHNLTMN-VALGTALVDMYAKCGNIKKAIQVFEEMPGRNSLTWTAIICGLALHGQPHAA 473
Query: 216 FGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALS-MHSLLLKSGYNNEDPLDNLLVS 274
++M + + PD + F+ ++ C G + + + K G + + + LV
Sbjct: 474 ISYFSEMISIGLVPDEITFIGVLSACCHGGLVDQGRDYFYQMTSKYGISPKLKHYSCLVD 533
Query: 275 MYTKCGDLELARRVFDAV-LEKSVFLWTSMIGG 306
+ + G LE A + ++ E +W ++ G
Sbjct: 534 LLGRAGFLEEAEELIRSMPFEPDAVVWGALFFG 566
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 75/290 (25%), Positives = 118/290 (40%), Gaps = 41/290 (14%)
Query: 12 EETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGL 71
+E L+ + M + V + T L AC+ + ++ G +H +V K + + T L
Sbjct: 370 KEALALFHEMQASSVAPDKITVVNCLSACSQLGALDVGIWMHHYVDKHNLTMNVALGTAL 429
Query: 72 IDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLEL 131
+DMY+KC + + +V +EMP R+ ++W +II + AI EM +GL
Sbjct: 430 VDMYAKCGNIKKAIQVFEEMPG--RNSLTWTAIICGLALHGQPHAAISYFSEMISIGLVP 487
Query: 132 SASTFVSVVSGCSFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEI 191
TF+ V+S C GL++ + S Y K+ + D +
Sbjct: 488 DEITFIGVLSACCHG------------GLVDQGRDYFYQMTSKYGISPKLKHYSCLVDLL 535
Query: 192 GETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLAL 251
G G + EA L +R M PD VV+ L G GN+ +
Sbjct: 536 GRA---------------GFLEEAEEL---IRSMPFEPDAVVWGALFFGSRIHGNVHMGE 577
Query: 252 SMHSLLLKSGYNNEDPLDN----LLVSMYTKCGDLELARRVFDAVLEKSV 297
S LL+ DP D LL +MY E AR+V + E+ V
Sbjct: 578 RAASKLLEL-----DPHDGGIYVLLANMYGDANMWEQARKVRKMMEERGV 622
>gi|255574235|ref|XP_002528032.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223532562|gb|EEF34350.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 730
Score = 332 bits (850), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 193/619 (31%), Positives = 324/619 (52%), Gaps = 44/619 (7%)
Query: 42 NINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSW 101
N+ S+ GK++H+ ++ +GF+Q + L+ Y+ D ++ + E L + W
Sbjct: 105 NLKSLSQGKQLHTLIISLGFEQHPIIVPKLVTFYTNF-DLLADAHTITENSNILHPL-PW 162
Query: 102 NSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCSFRQGIS----MHCCVYK 157
N +IS++ R L+ EA+ K+M G+ T+ SV+ C + I+ +H +
Sbjct: 163 NLLISSYVRNGLHGEALSAYKQMTHKGIRPDKFTYPSVLKACGEKLDIAFGKKLHASI-N 221
Query: 158 LGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFG 217
L + + NS++SMYAK G+++ AR +F+ + E VSW T+I GY + G EAF
Sbjct: 222 ASCLGWNLFVHNSLVSMYAKTGELSTARCLFENMLERDDVSWNTMISGYASKGMWKEAFE 281
Query: 218 LCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSM------------------------ 253
L +MR + +++ + + GC Q GN AL +
Sbjct: 282 LFGKMRVEGIELNIITWNTIAGGCVQSGNFEEALELLSHMRSYGIDMDSVATIIGLGACS 341
Query: 254 -----------HSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTS 302
H ++S Y+ D + N L++MY++C L A +F + K++ W S
Sbjct: 342 HIGAIKLGREIHGSAIRSFYDGVDNVKNALITMYSRCKYLRHAYNLFQSTRTKNIITWNS 401
Query: 303 MIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLN- 361
M+ GY + EA LF+ +L + + PN T+A+ L CA + +L GKE YI+
Sbjct: 402 MLSGYTHMDRSEEASFLFREMLLSGIEPNYVTIASILPLCARVANLQHGKEFHCYILRRA 461
Query: 362 GLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLF 421
G + + SL+ M+++ G++ +AK +F+ + +D ++++I GY I G G +AL LF
Sbjct: 462 GFKDYLLLWNSLVDMYARSGKVLEAKRLFDSISRRDEVTYTSLIAGYGIQGEGREALKLF 521
Query: 422 YKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLG 481
+M+ +KPD V ++LSACSHSG+V +G+ F+ M S +GI P +EH+ C+VDL G
Sbjct: 522 DEMKK-RHIKPDHVTMVAVLSACSHSGLVTEGIKLFELMPSAYGIIPRLEHFACMVDLFG 580
Query: 482 RAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYIL 541
RAG A + I MP + +WA LL AC H N E+GE+AA+ LL + P ++G Y+L
Sbjct: 581 RAGLLHKAKEMITRMPYRPSSAMWATLLGACRIHGNAEIGEWAAEKLLEMRPENSGYYVL 640
Query: 542 MANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKT 601
+AN++ +AG W + A R M D + K PG + V++ F+ D S +
Sbjct: 641 IANMYAAAGCWSKLAKVRTYMRDLGVRKAPGCAWVDVGSGFFPFLVDDTSKPHVNKLYPL 700
Query: 602 LKELHIKLLEAGYIAEADI 620
L+ L + +A Y+ + ++
Sbjct: 701 LEGLTELMKDAEYVGKENV 719
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 123/453 (27%), Positives = 222/453 (49%), Gaps = 43/453 (9%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+I + NG E LS Y M G+ + FT+P VLKAC I GK++H+ +
Sbjct: 165 LISSYVRNGLHGEALSAYKQMTHKGIRPDKFTYPSVLKACGEKLDIAFGKKLHASINASC 224
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+ FV L+ MY+K + ++R + + M R VSWN++IS ++ + EA +
Sbjct: 225 LGWNLFVHNSLVSMYAKTGELSTARCLFENMLE--RDDVSWNTMISGYASKGMWKEAFEL 282
Query: 121 LKEMWVLGLELSASTFVSVVSGC----SFRQ-----------GISMHCCVYKLGL----- 160
+M V G+EL+ T+ ++ GC +F + GI M +GL
Sbjct: 283 FGKMRVEGIELNIITWNTIAGGCVQSGNFEEALELLSHMRSYGIDMDSVATIIGLGACSH 342
Query: 161 -----LNNEIP-------------LANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTI 202
L EI + N++++MY++ + A ++F +I++W ++
Sbjct: 343 IGAIKLGREIHGSAIRSFYDGVDNVKNALITMYSRCKYLRHAYNLFQSTRTKNIITWNSM 402
Query: 203 IGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLL-KSG 261
+ GY ++ EA L +M + P+ V +++ CA+V NL H +L ++G
Sbjct: 403 LSGYTHMDRSEEASFLFREMLLSGIEPNYVTIASILPLCARVANLQHGKEFHCYILRRAG 462
Query: 262 YNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFK 321
+ + L N LV MY + G + A+R+FD++ + +TS+I GY G EA+ LF
Sbjct: 463 FKDYLLLWNSLVDMYARSGKVLEAKRLFDSISRRDEVTYTSLIAGYGIQGEGREALKLFD 522
Query: 322 RLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYI-VLNGLESNRQVQTSLIHMFSKC 380
+ K ++P+ T+ LSAC+ G +++G ++ E + G+ + ++ +F +
Sbjct: 523 EMKKRHIKPDHVTMVAVLSACSHSGLVTEGIKLFELMPSAYGIIPRLEHFACMVDLFGRA 582
Query: 381 GRINKAKEVFERVPDK-DLAVWSAMINGYAIHG 412
G ++KAKE+ R+P + A+W+ ++ IHG
Sbjct: 583 GLLHKAKEMITRMPYRPSSAMWATLLGACRIHG 615
>gi|147855060|emb|CAN82371.1| hypothetical protein VITISV_027622 [Vitis vinifera]
Length = 697
Score = 332 bits (850), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 176/577 (30%), Positives = 312/577 (54%), Gaps = 9/577 (1%)
Query: 50 KRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHS 109
+++H+ ++ G + F+ L++ Y C ++++ P + +VVSW +IS +
Sbjct: 41 QQIHAQIITSGLTHNTFLSNSLMNAYVYCGLLADAKQIFHHTPCK--NVVSWTILISGLA 98
Query: 110 RACLNDEAILVLKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEI 165
+ EAI V +EM + + +A T SV+ + R S+HC + G N +
Sbjct: 99 KNDCFVEAIDVFREMTMGNFKPNAVTISSVLPAFANLGLIRIAKSVHCFWVRGGFEGN-V 157
Query: 166 PLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRM 225
+ +++ MY+KFG + AR +F+ + E ++VSW I+ GY + G EA L N MRR
Sbjct: 158 FVETALVDMYSKFGCMGVARQLFESMSERNVVSWNAIVSGYSDHGFSEEAIDLFNLMRRK 217
Query: 226 SVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELA 285
+ D ++LI VG L + +H ++++GY N+ + L+ +Y ++ A
Sbjct: 218 GLLVDFYTIMSLIPASLSVGCLQVGTGIHGFIIRTGYENDKHIKTALMDIYVSHNCVDDA 277
Query: 286 RRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLK-TSVRPNEATLATTLSACAE 344
RVF + K V WT M+ G++ + A+ F ++L +++ + L LS+C+
Sbjct: 278 HRVFSEMFVKDVAAWTLMLTGFSSGRHWDRAIKHFNKMLGIQNLKLDSIVLMGILSSCSH 337
Query: 345 LGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAM 404
G+L +G+ + + +N V +++I M++ CG + AK F + +KD+ W+AM
Sbjct: 338 SGALQQGRRVHALAIKTCFANNIFVGSAVIDMYANCGNLEDAKRFFYGMGEKDVVCWNAM 397
Query: 405 INGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNF 464
I G ++G G A++LF +M+ GL PD + S+L ACSH+GMV +GL F M
Sbjct: 398 IAGNGMNGYGTDAIDLFLQMKG-SGLDPDESTFVSVLYACSHAGMVYEGLQIFYHMVKTS 456
Query: 465 GIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYA 524
P+++HY C++D+LGRAG+ D A I+ MP + V++ LL AC H N++LG
Sbjct: 457 HDIPNLQHYACVIDILGRAGQLDAAYSFINNMPFQPDFDVYSTLLGACRIHGNIKLGHEI 516
Query: 525 AKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQV 584
++ + + P G Y+L++N++ AG W+ R + +RL K+PG+S +EI+ +
Sbjct: 517 SQKIFEMEPNDAGYYVLLSNMYALAGNWEGVKMTRASLRSKRLKKDPGFSSIEINQEIYT 576
Query: 585 FVAGDRSHHLSVDIRKTLKELHIKLLEAGYIAEADIV 621
F+AG++ H I LK L +K+ +AGY+ +++
Sbjct: 577 FMAGEKDHPQYFKIEGILKGLILKIKKAGYVPNTNVL 613
Score = 179 bits (454), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 116/420 (27%), Positives = 214/420 (50%), Gaps = 12/420 (2%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+I N F E + + M N+ T VL A AN+ I K VH ++ G
Sbjct: 93 LISGLAKNDCFVEAIDVFREMTMGNFKPNAVTISSVLPAFANLGLIRIAKSVHCFWVRGG 152
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F+ + FV+T L+DMYSK +R++ + M R+VVSWN+I+S +S ++EAI +
Sbjct: 153 FEGNVFVETALVDMYSKFGCMGVARQLFESMSE--RNVVSWNAIVSGYSDHGFSEEAIDL 210
Query: 121 LKEMWVLGLELSASTFVSVVS-----GCSFRQGISMHCCVYKLGLLNNEIPLANSVMSMY 175
M GL + T +S++ GC + G +H + + G N++ + ++M +Y
Sbjct: 211 FNLMRRKGLLVDFYTIMSLIPASLSVGC-LQVGTGIHGFIIRTGYENDK-HIKTALMDIY 268
Query: 176 AKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRM-SVTPDLVVF 234
V++A +F E+ + +WT ++ G+ + + + A N+M + ++ D +V
Sbjct: 269 VSHNCVDDAHRVFSEMFVKDVAAWTLMLTGFSSGRHWDRAIKHFNKMLGIQNLKLDSIVL 328
Query: 235 LNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLE 294
+ ++ C+ G L +H+L +K+ + N + + ++ MY CG+LE A+R F + E
Sbjct: 329 MGILSSCSHSGALQQGRRVHALAIKTCFANNIFVGSAVIDMYANCGNLEDAKRFFYGMGE 388
Query: 295 KSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEI 354
K V W +MI G GY ++A++LF ++ + + P+E+T + L AC+ G + +G +I
Sbjct: 389 KDVVCWNAMIAGNGMNGYGTDAIDLFLQMKGSGLDPDESTFVSVLYACSHAGMVYEGLQI 448
Query: 355 EEYIVLNGLE-SNRQVQTSLIHMFSKCGRINKAKEVFERVP-DKDLAVWSAMINGYAIHG 412
++V + N Q +I + + G+++ A +P D V+S ++ IHG
Sbjct: 449 FYHMVKTSHDIPNLQHYACVIDILGRAGQLDAAYSFINNMPFQPDFDVYSTLLGACRIHG 508
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 91/203 (44%), Gaps = 3/203 (1%)
Query: 313 PSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTS 372
P N ++ L + + S +L L ++I I+ +GL N + S
Sbjct: 2 PPVNFNFYRHLSSNPTQRLCPLAQSHASILRKLKDLKPLQQIHAQIITSGLTHNTFLSNS 61
Query: 373 LIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKP 432
L++ + CG + AK++F P K++ W+ +I+G A + +A+++F +M + KP
Sbjct: 62 LMNAYVYCGLLADAKQIFHHTPCKNVVSWTILISGLAKNDCFVEAIDVFREMT-MGNFKP 120
Query: 433 DAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKT 492
+AV +S+L A ++ G++ S G E ++ LVD+ + G +A +
Sbjct: 121 NAVTISSVLPAFANLGLIRIAKS-VHCFWVRGGFEGNVFVETALVDMYSKFGCMGVARQL 179
Query: 493 IHEMPVEVQAQVWAPLLSACMKH 515
M E W ++S H
Sbjct: 180 FESMS-ERNVVSWNAIVSGYSDH 201
>gi|359474850|ref|XP_002277741.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Vitis vinifera]
gi|297744624|emb|CBI37886.3| unnamed protein product [Vitis vinifera]
Length = 648
Score = 332 bits (850), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 202/580 (34%), Positives = 317/580 (54%), Gaps = 10/580 (1%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI NG +++ +S M + + SFT VL + A + G+ VH +LK G
Sbjct: 63 MIHGYNRNGFRRKSMELFSQMRISSLVPTSFTMVGVLVSIAGLGDPVLGQCVHGLILKYG 122
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
D V T L++ Y+KC + V S +V +++ +VS ++I+S L +EA+++
Sbjct: 123 LDSDFRVVTALLNAYAKCGNVVDSYRVFEQL--ENPGLVSCSAIVSGFVYNELFEEAVVL 180
Query: 121 LKEMWVLGLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
+ LG+ +A+T ++++ C S R S+H V KL L+ ++ + NSV+ MY+
Sbjct: 181 FNQFRKLGMVPNAATVLTLIRACVALESRRLCESIHGMVVKLSLVL-DVAVNNSVLDMYS 239
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
++ A +F+ + ++SWTT+I V + ++A L QMR + D+VV +N
Sbjct: 240 SMLDLDAATRVFEGMECRDVISWTTMINLLVCLEYASDALMLFRQMRNTGICNDVVVVMN 299
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
LI CA +G+L +H+ + G+ +E PL N +++MY+KCGDL+ +R VFD KS
Sbjct: 300 LISACAILGDLKRGREIHTQAIVCGFGSELPLTNSIIAMYSKCGDLDSSRTVFDQTTGKS 359
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLL-KTSVRPNEATLATTLSACAELGSLSKGKEIE 355
+ WT+MI G Q GYP EA+ L ++ + S + L LSA EL L +++
Sbjct: 360 LVSWTAMILGCVQNGYPREALKLLIKMRGEESFYLDSIMLIGVLSASGELALLELCQQLH 419
Query: 356 EYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPD-KDLAVWSAMINGYAIHGMG 414
Y +G R VQ SLI +SKCG + A VF ++ +D+ W+A++NGY I+G G
Sbjct: 420 CYAFESGFPRYRLVQNSLISAYSKCGDVEPAYNVFGQMGYIRDIVSWNAILNGYGINGHG 479
Query: 415 DQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYL 474
+ A+ L+++M+ PDA Y +LSACSHSG+VDDGL F M I PS +H
Sbjct: 480 EIAVALYHEMRKGRE-NPDAATYLCVLSACSHSGLVDDGLVIFNQMVEERTIRPSQDHCG 538
Query: 475 CLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPG 534
C+VDLL RAG F A + + ++ W LLS C H NV L E AA+ + L+P
Sbjct: 539 CIVDLLARAGCFSDAREFVSRYMEKMGPNAWRALLSGCQLHGNVGLAELAARRVCELDPE 598
Query: 535 STGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWS 574
G +L++N++ S G +++A R M + L K PG S
Sbjct: 599 EPGQVVLLSNVYASVGRFQDAEALRASMKKKELIKNPGIS 638
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 112/395 (28%), Positives = 208/395 (52%), Gaps = 5/395 (1%)
Query: 52 VHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRA 111
+H+ + D + L+ Y K D +++ K+ +E+P R VVSW+ +I ++R
Sbjct: 13 IHTSTQRYPHGSDPINYSKLLSCYLKSGDIINAGKLFEEIPKR--DVVSWSIMIHGYNRN 70
Query: 112 CLNDEAILVLKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGL---LNNEIPLA 168
+++ + +M + L ++ T V V+ + + CV+ L L L+++ +
Sbjct: 71 GFRRKSMELFSQMRISSLVPTSFTMVGVLVSIAGLGDPVLGQCVHGLILKYGLDSDFRVV 130
Query: 169 NSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVT 228
++++ YAK G V ++ +F+++ +VS + I+ G+V EA L NQ R++ +
Sbjct: 131 TALLNAYAKCGNVVDSYRVFEQLENPGLVSCSAIVSGFVYNELFEEAVVLFNQFRKLGMV 190
Query: 229 PDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRV 288
P+ L LI C + + L S+H +++K + ++N ++ MY+ DL+ A RV
Sbjct: 191 PNAATVLTLIRACVALESRRLCESIHGMVVKLSLVLDVAVNNSVLDMYSSMLDLDAATRV 250
Query: 289 FDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSL 348
F+ + + V WT+MI L Y S+A+ LF+++ T + + + +SACA LG L
Sbjct: 251 FEGMECRDVISWTTMINLLVCLEYASDALMLFRQMRNTGICNDVVVVMNLISACAILGDL 310
Query: 349 SKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGY 408
+G+EI ++ G S + S+I M+SKCG ++ ++ VF++ K L W+AMI G
Sbjct: 311 KRGREIHTQAIVCGFGSELPLTNSIIAMYSKCGDLDSSRTVFDQTTGKSLVSWTAMILGC 370
Query: 409 AIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSA 443
+G +AL L KM+ E D+++ +LSA
Sbjct: 371 VQNGYPREALKLLIKMRGEESFYLDSIMLIGVLSA 405
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 108/180 (60%), Gaps = 2/180 (1%)
Query: 266 DPLD-NLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLL 324
DP++ + L+S Y K GD+ A ++F+ + ++ V W+ MI GY + G+ +++ LF ++
Sbjct: 25 DPINYSKLLSCYLKSGDIINAGKLFEEIPKRDVVSWSIMIHGYNRNGFRRKSMELFSQMR 84
Query: 325 KTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRIN 384
+S+ P T+ L + A LG G+ + I+ GL+S+ +V T+L++ ++KCG +
Sbjct: 85 ISSLVPTSFTMVGVLVSIAGLGDPVLGQCVHGLILKYGLDSDFRVVTALLNAYAKCGNVV 144
Query: 385 KAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSAC 444
+ VFE++ + L SA+++G+ + + ++A+ LF + + + G+ P+A +++ AC
Sbjct: 145 DSYRVFEQLENPGLVSCSAIVSGFVYNELFEEAVVLFNQFRKL-GMVPNAATVLTLIRAC 203
>gi|359490408|ref|XP_002267761.2| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Vitis vinifera]
Length = 650
Score = 332 bits (850), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 191/572 (33%), Positives = 309/572 (54%), Gaps = 40/572 (6%)
Query: 50 KRVHSHVLKVGFQQDAFVQTGLIDMYSKCS-DFVSSRKVLDEMPVRLRSVVSWNSIISAH 108
K +H+H+++ D F+ + +I YS S + + V ++ + ++V WN +I
Sbjct: 34 KELHAHLIRTQLHTDPFLMSDVIRSYSLSSTNLHKAHLVFNQ--IECPTLVVWNHMIRGL 91
Query: 109 SRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNE 164
S++ EAI + M G+ + T + + C+ G +H KLG +
Sbjct: 92 SQSDHPVEAIHMYTRMHHQGITGNNLTLIFLFKACARVSDIVSGRKIHVHALKLGF-ESY 150
Query: 165 IPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRR 224
+ ++N+++ MYA G++ A+ +FD + + +VSW T+I GY E L + M
Sbjct: 151 LFVSNALIHMYAMCGQLGFAQKMFDGMLDRDLVSWNTLICGYSQYNKYKEVLRLFDAMTA 210
Query: 225 MSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMY-------- 276
++ D V + +IL C+ +G+ A SM + ++ + L N L+ MY
Sbjct: 211 ANIKADAVTMVKIILACSHLGDWEFADSMVKYIKENNLEIDVYLGNTLIDMYGRRSLAEL 270
Query: 277 -----------------------TKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYP 313
K G+L AR++FD + ++ V WTSMI GY+Q
Sbjct: 271 AQGVFDRMRERNIVSWNALVMGHAKVGNLTAARKLFDNMPKRDVISWTSMITGYSQASQF 330
Query: 314 SEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSL 373
S+AV LF+ ++ V+P++ T+A+ LSACA LG L G + YI +G++++ V SL
Sbjct: 331 SDAVKLFQEMMAAKVKPDKVTVASVLSACAHLGKLDVGWAVHHYIRRHGVQADIYVGNSL 390
Query: 374 IHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPD 433
I M+ KCG + KA EVF R+ DKD W+++I+G A++G + AL+LF +M EG++P
Sbjct: 391 IDMYCKCGMVEKALEVFHRMKDKDSVSWTSVISGLAVNGFANSALDLFSQMLR-EGVQPT 449
Query: 434 AVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTI 493
+ IL AC+H+G+V+ GL +F+SM+S G+ P+++HY C+VDLL R+G D A + I
Sbjct: 450 HGTFVGILLACAHAGLVNKGLEYFESMESVHGLVPAMKHYGCVVDLLSRSGNIDKAYEFI 509
Query: 494 HEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWK 553
+MP+ VW LLSAC H NV L E A K LL L+P +GNY+L++N + W
Sbjct: 510 KKMPIVPDVVVWRILLSACKLHGNVVLAEIATKRLLELDPCDSGNYVLLSNTYAGVDRWD 569
Query: 554 EAATARGLMDDRRLTKEPGWSQVEIDGSVQVF 585
+A R LM+D + K G S +E+DG V +
Sbjct: 570 DAMKMRELMEDSDVQKPSGSSSIEVDGMVSNY 601
Score = 207 bits (527), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 128/448 (28%), Positives = 216/448 (48%), Gaps = 38/448 (8%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MIR + + E + Y+ M G+ GN+ T + KACA ++ I G+++H H LK+G
Sbjct: 87 MIRGLSQSDHPVEAIHMYTRMHHQGITGNNLTLIFLFKACARVSDIVSGRKIHVHALKLG 146
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F+ FV LI MY+ C ++K+ D M R +VSWN++I +S+ E + +
Sbjct: 147 FESYLFVSNALIHMYAMCGQLGFAQKMFDGMLD--RDLVSWNTLICGYSQYNKYKEVLRL 204
Query: 121 LKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGLLNN---EIPLANSVMSMY-- 175
M ++ A T V ++ CS + K NN ++ L N+++ MY
Sbjct: 205 FDAMTAANIKADAVTMVKIILACSHLGDWEFADSMVKYIKENNLEIDVYLGNTLIDMYGR 264
Query: 176 -----------------------------AKFGKVNEARSIFDEIGETSIVSWTTIIGGY 206
AK G + AR +FD + + ++SWT++I GY
Sbjct: 265 RSLAELAQGVFDRMRERNIVSWNALVMGHAKVGNLTAARKLFDNMPKRDVISWTSMITGY 324
Query: 207 VNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNED 266
++A L +M V PD V +++ CA +G L + ++H + + G +
Sbjct: 325 SQASQFSDAVKLFQEMMAAKVKPDKVTVASVLSACAHLGKLDVGWAVHHYIRRHGVQADI 384
Query: 267 PLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKT 326
+ N L+ MY KCG +E A VF + +K WTS+I G A G+ + A++LF ++L+
Sbjct: 385 YVGNSLIDMYCKCGMVEKALEVFHRMKDKDSVSWTSVISGLAVNGFANSALDLFSQMLRE 444
Query: 327 SVRPNEATLATTLSACAELGSLSKGKE-IEEYIVLNGLESNRQVQTSLIHMFSKCGRINK 385
V+P T L ACA G ++KG E E ++GL + ++ + S+ G I+K
Sbjct: 445 GVQPTHGTFVGILLACAHAGLVNKGLEYFESMESVHGLVPAMKHYGCVVDLLSRSGNIDK 504
Query: 386 AKEVFERVPD-KDLAVWSAMINGYAIHG 412
A E +++P D+ VW +++ +HG
Sbjct: 505 AYEFIKKMPIVPDVVVWRILLSACKLHG 532
>gi|302773325|ref|XP_002970080.1| hypothetical protein SELMODRAFT_171135 [Selaginella moellendorffii]
gi|300162591|gb|EFJ29204.1| hypothetical protein SELMODRAFT_171135 [Selaginella moellendorffii]
Length = 829
Score = 332 bits (850), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 204/629 (32%), Positives = 324/629 (51%), Gaps = 20/629 (3%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI G + L + M GV N+ TF VL ACA++ +I GK +H ++ G
Sbjct: 114 MIAAYAQRGHPGDALELFVRMDHEGVKANAITFVSVLDACASMRAIALGKSIHERIVADG 173
Query: 61 F-QQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAIL 119
D + +++MY KC + +R+V + M + + V+WN++I+A SR EA
Sbjct: 174 LLGDDVILGNTIVNMYGKCGEVDLAREVFERMEAK--NAVTWNTMIAACSRHDRYKEAFA 231
Query: 120 VLKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGL---LNNEIPLANSVMSMYA 176
+L EM + GL + T VSV+ C++ Q I V+++ L ++ +AN+++++Y
Sbjct: 232 LLGEMDLDGLRPNKITLVSVIDACAWMQSIVRGRIVHEIVAGEGLESDNTVANALVNLYG 291
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K GK+ AR + I +SWTT++ Y G+ A + +M V D F+N
Sbjct: 292 KCGKLRAARHALEGIETRDKISWTTLLAAYARHGHGKRAIAVIKRMDHEGVKLDSFTFVN 351
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLE-K 295
L+ C + L L +H L +SG + L LV MY KCG+ + ARR FD + + +
Sbjct: 352 LLESCVAIAALALGEEIHDRLAESGIELDPVLQTALVDMYGKCGNPDAARRAFDRMSDVR 411
Query: 296 SVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIE 355
V +W +++ Y E + +F R+ V P+ T + L ACA L +L G+
Sbjct: 412 DVTVWNALLAAYVLRDQGKETLGIFARMSLQGVAPDAVTFLSILDACASLAALGLGRLTH 471
Query: 356 EYIVLNGLESNRQV------QTSLIHMFSKCGRINKAKEVF---ERVPDKDLAVWSAMIN 406
++ GL + V TS+I+M++KCG + AK F R D+ WSAM+
Sbjct: 472 SRMLERGLFDRQAVASADLLTTSVINMYAKCGSLADAKAEFAKARRARASDVVAWSAMVA 531
Query: 407 GYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGI 466
Y+ G+ ++AL FY MQ EG+KPD+V + S ++ CSHSG+V + ++FF S++ + GI
Sbjct: 532 AYSQFGLSEEALRCFYSMQQ-EGVKPDSVSFVSAIAGCSHSGLVREAVAFFTSLRHDHGI 590
Query: 467 EPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAK 526
P+ H+ CLVDLL RAG A + P+ W LLSAC + ++E A
Sbjct: 591 APTEAHFACLVDLLSRAGWIREAEALMRRAPLGAHHSTWMTLLSACRTYGDLERARRVAA 650
Query: 527 NLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFV 586
L +L GS Y L+A++F + W + AR + +R +PG S +EI+ V F
Sbjct: 651 RLASLRSGSA--YSLLASVFCLSRKWDDVRNARQSLVERGFITQPGCSWIEINNRVYEFF 708
Query: 587 AG-DRSHHLSVDIRKTLKELHIKLLEAGY 614
AG DR +I L+ L +++ +AGY
Sbjct: 709 AGDDRLLPREEEIFAELERLCVEIRKAGY 737
Score = 241 bits (615), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 135/470 (28%), Positives = 251/470 (53%), Gaps = 20/470 (4%)
Query: 2 IRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKV-G 60
I NG L + +M GV + + +L A A++ + G+ H V + G
Sbjct: 13 IAEYARNGHHARALEIFRAMALEGVAPDRVSCIAILDAFASLGDLSQGEFFHRTVCEASG 72
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
D V T ++ MY++C +R+ D M VR +VVSW+++I+A+++ +A+ +
Sbjct: 73 LGSDVVVATAVLTMYNRCGSVSHARRAFDAMVVR--NVVSWSAMIAAYAQRGHPGDALEL 130
Query: 121 LKEMWVLGLELSASTFVSVVSGCSFRQGI----SMHCCVYKLGLLNNEIPLANSVMSMYA 176
M G++ +A TFVSV+ C+ + I S+H + GLL +++ L N++++MY
Sbjct: 131 FVRMDHEGVKANAITFVSVLDACASMRAIALGKSIHERIVADGLLGDDVILGNTIVNMYG 190
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K G+V+ AR +F+ + + V+W T+I EAF L +M + P+ + ++
Sbjct: 191 KCGEVDLAREVFERMEAKNAVTWNTMIAACSRHDRYKEAFALLGEMDLDGLRPNKITLVS 250
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
+I CA + ++ +H ++ G +++ + N LV++Y KCG L AR + + +
Sbjct: 251 VIDACAWMQSIVRGRIVHEIVAGEGLESDNTVANALVNLYGKCGKLRAARHALEGIETRD 310
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEE 356
WT+++ YA+ G+ A+ + KR+ V+ + T L +C + +L+ G+EI +
Sbjct: 311 KISWTTLLAAYARHGHGKRAIAVIKRMDHEGVKLDSFTFVNLLESCVAIAALALGEEIHD 370
Query: 357 YIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPD-KDLAVWSAMINGYAIHGMGD 415
+ +G+E + +QT+L+ M+ KCG + A+ F+R+ D +D+ VW+A++ Y + G
Sbjct: 371 RLAESGIELDPVLQTALVDMYGKCGNPDAARRAFDRMSDVRDVTVWNALLAAYVLRDQGK 430
Query: 416 QALNLFYKMQHVEGLKPDAVVYTSILSAC-----------SHSGMVDDGL 454
+ L +F +M ++G+ PDAV + SIL AC +HS M++ GL
Sbjct: 431 ETLGIFARMS-LQGVAPDAVTFLSILDACASLAALGLGRLTHSRMLERGL 479
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 95/328 (28%), Positives = 169/328 (51%), Gaps = 7/328 (2%)
Query: 191 IGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLA 250
+ + S SW I Y G+ A + M V PD V + ++ A +G+L
Sbjct: 1 MADRSPFSWNLAIAEYARNGHHARALEIFRAMALEGVAPDRVSCIAILDAFASLGDLSQG 60
Query: 251 LSMHSLLLK-SGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQ 309
H + + SG ++ + +++MY +CG + ARR FDA++ ++V W++MI YAQ
Sbjct: 61 EFFHRTVCEASGLGSDVVVATAVLTMYNRCGSVSHARRAFDAMVVRNVVSWSAMIAAYAQ 120
Query: 310 LGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQV 369
G+P +A+ LF R+ V+ N T + L ACA + +++ GK I E IV +GL + +
Sbjct: 121 RGHPGDALELFVRMDHEGVKANAITFVSVLDACASMRAIALGKSIHERIVADGLLGDDVI 180
Query: 370 -QTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVE 428
++++M+ KCG ++ A+EVFER+ K+ W+ MI + H +A L +M ++
Sbjct: 181 LGNTIVNMYGKCGEVDLAREVFERMEAKNAVTWNTMIAACSRHDRYKEAFALLGEMD-LD 239
Query: 429 GLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDL 488
GL+P+ + S++ AC+ + G + + G+E LV+L G+ G+
Sbjct: 240 GLRPNKITLVSVIDACAWMQSIVRG-RIVHEIVAGEGLESDNTVANALVNLYGKCGKLRA 298
Query: 489 ALKTIHEMPVEVQAQV-WAPLLSACMKH 515
A + +E + ++ W LL+A +H
Sbjct: 299 ARHALE--GIETRDKISWTTLLAAYARH 324
>gi|359495864|ref|XP_002266254.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g65570-like [Vitis vinifera]
Length = 751
Score = 332 bits (850), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 192/593 (32%), Positives = 328/593 (55%), Gaps = 10/593 (1%)
Query: 33 FPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMP 92
+ +++ C I SI D ++ SH LK GF + LID Y KC V +RKV DE+P
Sbjct: 80 YSSLIQQCIGIKSITDITKIQSHALKRGFHHS--LGNKLIDAYLKCGSVVYARKVFDEVP 137
Query: 93 VRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCS----FRQG 148
R +V+WNS+I+++ R + EAI + + M G+ TF SV S +G
Sbjct: 138 --HRHIVAWNSMIASYIRNGRSKEAIDIYQRMVPDGILPDEFTFSSVFKAFSDLGLVHEG 195
Query: 149 ISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVN 208
H LG+ + + + ++++ MYAKFGK+ +AR + D++ +V +T +I GY +
Sbjct: 196 QRAHGQSVVLGVGVSNVFVGSALVDMYAKFGKMRDARLVSDQVVGKDVVLFTALIVGYSH 255
Query: 209 VGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPL 268
G E+ + M + + + ++++ C + +L +H L++K+G +
Sbjct: 256 HGEDGESLQVFRNMTKKGIEANEYTLSSVLVCCGNLEDLTSGRLIHGLIVKAGLESAVAS 315
Query: 269 DNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSV 328
L++MY +CG ++ + +VF + + WTS+I G Q G A+ F+++L++S+
Sbjct: 316 QTSLLTMYYRCGLVDDSLKVFKQFINPNQVTWTSVIVGLVQNGREEIALLKFRQMLRSSI 375
Query: 329 RPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKE 388
PN TL++ L AC+ L L +GK+I ++ GL+ ++ V +LI + KCG A+
Sbjct: 376 TPNSFTLSSVLRACSSLAMLEQGKQIHAIVMKFGLDIDKYVGAALIDFYGKCGSTEIARS 435
Query: 389 VFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSG 448
VF + + D+ ++MI YA +G G +AL LF M+ GL+P+ V + +LSAC+++G
Sbjct: 436 VFNGLLEVDVVSVNSMIYSYAQNGFGHEALQLFSGMKDT-GLEPNNVTWLGVLSACNNAG 494
Query: 449 MVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPL 508
++++G F S +++ IE + +HY C+VDLLGRAGR A I+++ + +W L
Sbjct: 495 LLEEGCHIFSSARNSGNIELTKDHYACMVDLLGRAGRLKEAEMLINQVNIS-DVVIWRTL 553
Query: 509 LSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLT 568
LSAC H +VE+ + ++ L P G ++L++NL+ S G W + + M + RL
Sbjct: 554 LSACRIHGDVEMAKRVMNRVIDLAPEDGGTHVLLSNLYASTGNWSKVIEMKSAMREMRLK 613
Query: 569 KEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKELHIKLLEAGYIAEADIV 621
K P S V+++ + F+AGD SH DIR+ L+EL K+ E GY+ + V
Sbjct: 614 KNPAMSWVDVEREIHTFMAGDWSHPNFRDIREKLEELIEKVKELGYVPDTRFV 666
Score = 181 bits (460), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 128/440 (29%), Positives = 219/440 (49%), Gaps = 14/440 (3%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVH--SHVLK 58
MI + NG +E + Y M+ G+ + FTF V KA +++ + +G+R H S VL
Sbjct: 147 MIASYIRNGRSKEAIDIYQRMVPDGILPDEFTFSSVFKAFSDLGLVHEGQRAHGQSVVLG 206
Query: 59 VGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAI 118
VG + FV + L+DMY+K +R V D+ V + VV + ++I +S + E++
Sbjct: 207 VGV-SNVFVGSALVDMYAKFGKMRDARLVSDQ--VVGKDVVLFTALIVGYSHHGEDGESL 263
Query: 119 LVLKEMWVLGLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSM 174
V + M G+E + T SV+ C G +H + K G L + + S+++M
Sbjct: 264 QVFRNMTKKGIEANEYTLSSVLVCCGNLEDLTSGRLIHGLIVKAG-LESAVASQTSLLTM 322
Query: 175 YAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVF 234
Y + G V+++ +F + + V+WT++I G V G A QM R S+TP+
Sbjct: 323 YYRCGLVDDSLKVFKQFINPNQVTWTSVIVGLVQNGREEIALLKFRQMLRSSITPNSFTL 382
Query: 235 LNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLE 294
+++ C+ + L +H++++K G + + + L+ Y KCG E+AR VF+ +LE
Sbjct: 383 SSVLRACSSLAMLEQGKQIHAIVMKFGLDIDKYVGAALIDFYGKCGSTEIARSVFNGLLE 442
Query: 295 KSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEI 354
V SMI YAQ G+ EA+ LF + T + PN T LSAC G L +G I
Sbjct: 443 VDVVSVNSMIYSYAQNGFGHEALQLFSGMKDTGLEPNNVTWLGVLSACNNAGLLEEGCHI 502
Query: 355 EEYIVLNG-LESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGM 413
+G +E + ++ + + GR+ +A+ + +V D+ +W +++ IHG
Sbjct: 503 FSSARNSGNIELTKDHYACMVDLLGRAGRLKEAEMLINQVNISDVVIWRTLLSACRIHGD 562
Query: 414 GDQALNLFYKMQHVEGLKPD 433
+ A + M V L P+
Sbjct: 563 VEMAKRV---MNRVIDLAPE 579
>gi|356499129|ref|XP_003518395.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g34400-like [Glycine max]
Length = 614
Score = 332 bits (850), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 175/484 (36%), Positives = 278/484 (57%), Gaps = 3/484 (0%)
Query: 136 FVSVVSGCSFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETS 195
F+S + S + H ++KL L +++ A+S+++ YA+ G V AR +FDEI
Sbjct: 129 FLSCANLASLSHACAAHSLLFKLAL-HSDPHTAHSLITAYARCGLVASARKVFDEIPHRD 187
Query: 196 IVSWTTIIGGYVNVGNVNEAFGLCNQM-RRMSVTPDLVVFLNLILGCAQVGNLFLALSMH 254
VSW ++I GY G EA + +M RR PD + ++L+ C ++G+L L +
Sbjct: 188 SVSWNSMIAGYAKAGCAREAVEVFREMGRRDGFEPDEMSLVSLLGACGELGDLELGRWVE 247
Query: 255 SLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPS 314
+++ G + + L+SMY KCG+LE ARR+FD + + V W ++I GYAQ G
Sbjct: 248 GFVVERGMTLNSYIGSALISMYAKCGELESARRIFDGMAARDVITWNAVISGYAQNGMAD 307
Query: 315 EAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLI 374
EA+ LF + + V N+ TL LSACA +G+L GK+I+EY G + + V T+LI
Sbjct: 308 EAILLFHGMKEDCVTANKITLTAVLSACATIGALDLGKQIDEYASQRGFQHDIFVATALI 367
Query: 375 HMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKM-QHVEGLKPD 433
M++K G ++ A+ VF+ +P K+ A W+AMI+ A HG +AL+LF M G +P+
Sbjct: 368 DMYAKSGSLDNAQRVFKDMPQKNEASWNAMISALAAHGKAKEALSLFQHMSDEGGGARPN 427
Query: 434 AVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTI 493
+ + +LSAC H+G+VD+G F M + FG+ P IEHY C+VDLL RAG A I
Sbjct: 428 DITFVGLLSACVHAGLVDEGYRLFDMMSTLFGLVPKIEHYSCMVDLLARAGHLYEAWDLI 487
Query: 494 HEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWK 553
+MP + LL AC NV++GE + +L ++P ++GNYI+ + ++ + MW+
Sbjct: 488 RKMPEKPDKVTLGALLGACRSKKNVDIGERVMRMILEVDPSNSGNYIISSKIYANLNMWE 547
Query: 554 EAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKELHIKLLEAG 613
++A R LM + +TK PG S +E++ + F AGD S+D+ + L+ +L G
Sbjct: 548 DSARMRLLMRQKGITKTPGCSWIEVENHLHEFHAGDGLCLDSIDLSNIIDLLYEELKREG 607
Query: 614 YIAE 617
Y+ +
Sbjct: 608 YVPK 611
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 117/405 (28%), Positives = 204/405 (50%), Gaps = 12/405 (2%)
Query: 1 MIRN-STNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKV 59
MIR +T ++ LS + M+ + ++FTFP +CAN+ S+ HS + K+
Sbjct: 92 MIRALTTTWHNYPLALSLFHRMMSLSLTPDNFTFPFFFLSCANLASLSHACAAHSLLFKL 151
Query: 60 GFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAIL 119
D LI Y++C S+RKV DE+P R VSWNS+I+ +++A EA+
Sbjct: 152 ALHSDPHTAHSLITAYARCGLVASARKVFDEIP--HRDSVSWNSMIAGYAKAGCAREAVE 209
Query: 120 VLKEMWVL-GLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSM 174
V +EM G E + VS++ C G + V + G+ N + ++++SM
Sbjct: 210 VFREMGRRDGFEPDEMSLVSLLGACGELGDLELGRWVEGFVVERGMTLNSY-IGSALISM 268
Query: 175 YAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVF 234
YAK G++ AR IFD + +++W +I GY G +EA L + M+ VT + +
Sbjct: 269 YAKCGELESARRIFDGMAARDVITWNAVISGYAQNGMADEAILLFHGMKEDCVTANKITL 328
Query: 235 LNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLE 294
++ CA +G L L + + G+ ++ + L+ MY K G L+ A+RVF + +
Sbjct: 329 TAVLSACATIGALDLGKQIDEYASQRGFQHDIFVATALIDMYAKSGSLDNAQRVFKDMPQ 388
Query: 295 KSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKT--SVRPNEATLATTLSACAELGSLSKGK 352
K+ W +MI A G EA++LF+ + RPN+ T LSAC G + +G
Sbjct: 389 KNEASWNAMISALAAHGKAKEALSLFQHMSDEGGGARPNDITFVGLLSACVHAGLVDEGY 448
Query: 353 EIEEYI-VLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDK 396
+ + + L GL + + ++ + ++ G + +A ++ ++P+K
Sbjct: 449 RLFDMMSTLFGLVPKIEHYSCMVDLLARAGHLYEAWDLIRKMPEK 493
Score = 183 bits (464), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 100/306 (32%), Positives = 170/306 (55%), Gaps = 4/306 (1%)
Query: 211 NVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDN 270
N A L ++M +S+TPD F L CA + +L A + HSLL K +++ +
Sbjct: 102 NYPLALSLFHRMMSLSLTPDNFTFPFFFLSCANLASLSHACAAHSLLFKLALHSDPHTAH 161
Query: 271 LLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRL-LKTSVR 329
L++ Y +CG + AR+VFD + + W SMI GYA+ G EAV +F+ + +
Sbjct: 162 SLITAYARCGLVASARKVFDEIPHRDSVSWNSMIAGYAKAGCAREAVEVFREMGRRDGFE 221
Query: 330 PNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEV 389
P+E +L + L AC ELG L G+ +E ++V G+ N + ++LI M++KCG + A+ +
Sbjct: 222 PDEMSLVSLLGACGELGDLELGRWVEGFVVERGMTLNSYIGSALISMYAKCGELESARRI 281
Query: 390 FERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGM 449
F+ + +D+ W+A+I+GYA +GM D+A+ LF+ M+ + + + + T++LSAC+ G
Sbjct: 282 FDGMAARDVITWNAVISGYAQNGMADEAILLFHGMKE-DCVTANKITLTAVLSACATIGA 340
Query: 450 VDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLL 509
+D G S G + I L+D+ ++G D A + +MP + +A W ++
Sbjct: 341 LDLGKQ-IDEYASQRGFQHDIFVATALIDMYAKSGSLDNAQRVFKDMPQKNEAS-WNAMI 398
Query: 510 SACMKH 515
SA H
Sbjct: 399 SALAAH 404
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 119/266 (44%), Gaps = 34/266 (12%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+I NG +E + + M + V N T VL ACA I ++ GK++ + + G
Sbjct: 296 VISGYAQNGMADEAILLFHGMKEDCVTANKITLTAVLSACATIGALDLGKQIDEYASQRG 355
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
FQ D FV T LIDMY+K ++++V +MP ++ SWN++ISA + EA+ +
Sbjct: 356 FQHDIFVATALIDMYAKSGSLDNAQRVFKDMPQ--KNEASWNAMISALAAHGKAKEALSL 413
Query: 121 LKEMWVL--GLELSASTFVSVVSGCSFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKF 178
+ M G + TFV ++S C +H GL++ L + + +++
Sbjct: 414 FQHMSDEGGGARPNDITFVGLLSAC-------VHA-----GLVDEGYRLFDMMSTLFGLV 461
Query: 179 GKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLI 238
K+ + D + G++ EA+ L +R+M PD V L+
Sbjct: 462 PKIEHYSCMVDLLARA---------------GHLYEAWDL---IRKMPEKPDKVTLGALL 503
Query: 239 LGCAQVGNLFLALSMHSLLLKSGYNN 264
C N+ + + ++L+ +N
Sbjct: 504 GACRSKKNVDIGERVMRMILEVDPSN 529
>gi|147801369|emb|CAN74731.1| hypothetical protein VITISV_037837 [Vitis vinifera]
Length = 719
Score = 332 bits (850), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 190/622 (30%), Positives = 329/622 (52%), Gaps = 41/622 (6%)
Query: 33 FPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRK------ 86
F +LK C + GK +HS +K + I +YSKC +RK
Sbjct: 11 FRHLLKTCIAERDLSTGKSLHSLYIKSFIPPSTYFSNHFILLYSKCGRLAWARKAFQDIS 70
Query: 87 -------------------------VLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVL 121
+ D++P +VS+N++ISA++ A+ +
Sbjct: 71 DPNVFSFNAIIAAYAKESRPLIAHQLFDQIPEP--DLVSYNTLISAYADCGETAPALGLF 128
Query: 122 KEMWVLGLELSASTFVSVVSGCSFRQGI--SMHCCVYKLGLLNNEIPLANSVMSMYAKFG 179
M +GL++ T +V++ C G+ +H G ++ + + N++++ Y K G
Sbjct: 129 SGMREMGLDMDXFTLSAVITACCDDVGLIGQLHSVAVSSGF-DSYVSVNNALLTYYGKNG 187
Query: 180 KVNEARSIFDEIGET-SIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLI 238
+++A+ +F +G VSW ++I Y ++A GL +M R + D+ +++
Sbjct: 188 DLDDAKRVFYGMGGIRDEVSWNSMIVAYGQHQEGSKALGLFQEMVRRGLNVDMFTLASVL 247
Query: 239 LGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGD-LELARRVFDAVLEKSV 297
+ +L L H L+K+G++ + + L+ +Y+KCG + R+VF+ + E +
Sbjct: 248 TAFTCLEDLSGGLQFHGQLIKTGFHQNSHVGSGLIDLYSKCGGGMSDCRKVFEEITEPDL 307
Query: 298 FLWTSMIGGYAQ-LGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEE 356
LW +M+ GY+Q + +A+ F+++ RPN+ + +SAC+ L S S+GK+I
Sbjct: 308 VLWNTMVSGYSQNEEFLEDALECFRQMQGIGYRPNDCSFVCVISACSNLSSPSQGKQIHS 367
Query: 357 YIVLNGLESNR-QVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGD 415
+ + + SNR V +LI M+SKCG + A+ +F+R+ + + ++MI GYA HG+
Sbjct: 368 LALKSDIPSNRISVDNALIAMYSKCGNLQDARRLFDRMAEHNTVSLNSMIAGYAQHGIEM 427
Query: 416 QALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLC 475
++L+LF M + + P ++ + S+LSAC+H+G V++G ++F M+ F IEP EHY C
Sbjct: 428 ESLHLFQWMLERQ-IAPTSITFISVLSACAHTGRVEEGWNYFNMMKEKFNIEPEAEHYSC 486
Query: 476 LVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGS 535
++DLLGRAG+ A I MP + WA LL AC H N+EL AA +L L P +
Sbjct: 487 MIDLLGRAGKLSEAENLIARMPFNPGSIGWASLLGACRTHGNIELAVKAANQVLQLEPSN 546
Query: 536 TGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLS 595
Y++++N++ SAG W+E AT R M DR + K+PG S +E+ + VFVA D SH +
Sbjct: 547 AAPYVVLSNMYASAGRWEEVATVRKFMRDRGVKKKPGCSWIEVKKRIHVFVAEDSSHPMI 606
Query: 596 VDIRKTLKELHIKLLEAGYIAE 617
+I + L+E+ K+ AGY+ +
Sbjct: 607 KEIYEFLEEMSGKMKRAGYVPD 628
Score = 168 bits (425), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 135/495 (27%), Positives = 230/495 (46%), Gaps = 49/495 (9%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+I + G L +S M + G+ + FT V+ AC + + ++HS + G
Sbjct: 111 LISAYADCGETAPALGLFSGMREMGLDMDXFTLSAVITACCDDVGLIG--QLHSVAVSSG 168
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F V L+ Y K D +++V M +R VSWNS+I A+ + +A+ +
Sbjct: 169 FDSYVSVNNALLTYYGKNGDLDDAKRVFYGMG-GIRDEVSWNSMIVAYGQHQEGSKALGL 227
Query: 121 LKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
+EM GL + T SV++ + G+ H + K G N + + ++ +Y+
Sbjct: 228 FQEMVRRGLNVDMFTLASVLTAFTCLEDLSGGLQFHGQLIKTGFHQNS-HVGSGLIDLYS 286
Query: 177 KF-GKVNEARSIFDEIGETSIVSWTTIIGGYV-NVGNVNEAFGLCNQMRRMSVTPDLVVF 234
K G +++ R +F+EI E +V W T++ GY N + +A QM+ + P+ F
Sbjct: 287 KCGGGMSDCRKVFEEITEPDLVLWNTMVSGYSQNEEFLEDALECFRQMQGIGYRPNDCSF 346
Query: 235 LNLILGCAQVGNLFLALSMHSLLLKSGY-NNEDPLDNLLVSMYTKCGDLELARRVFDAVL 293
+ +I C+ + + +HSL LKS +N +DN L++MY+KCG+L+ ARR+FD +
Sbjct: 347 VCVISACSNLSSPSQGKQIHSLALKSDIPSNRISVDNALIAMYSKCGNLQDARRLFDRMA 406
Query: 294 EKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKE 353
E + SMI GYAQ G E+++LF+ +L+ + P T + LSACA G + +G
Sbjct: 407 EHNTVSLNSMIAGYAQHGIEMESLHLFQWMLERQIAPTSITFISVLSACAHTGRVEEGWN 466
Query: 354 IEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGM 413
N KE F P+ + +S MI+ G
Sbjct: 467 Y----------------------------FNMMKEKFNIEPEAEH--YSCMIDLLGRAGK 496
Query: 414 GDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPS-IEH 472
+A NL +M P ++ + S+L AC G ++ + K+ +EPS
Sbjct: 497 LSEAENLIARMP----FNPGSIGWASLLGACRTHGNIELAV---KAANQVLQLEPSNAAP 549
Query: 473 YLCLVDLLGRAGRFD 487
Y+ L ++ AGR++
Sbjct: 550 YVVLSNMYASAGRWE 564
>gi|359477907|ref|XP_002270439.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g04840-like [Vitis vinifera]
Length = 677
Score = 332 bits (850), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 163/417 (39%), Positives = 256/417 (61%), Gaps = 5/417 (1%)
Query: 201 TIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKS 260
+++ YV +G + L ++ + + ++++ LI GC +VG+L A S+ + +
Sbjct: 178 SLVDMYVKIGELGFGLQLFDESPQRNKAESILLWNVLINGCCKVGDLSKAASLFEAMPER 237
Query: 261 GYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLF 320
+ N L++ + + GDL+ AR +F + EK+V WT+MI G++Q G +A+++F
Sbjct: 238 NAGSW----NSLINGFVRNGDLDRARELFVQMPEKNVVSWTTMINGFSQNGDHEKALSMF 293
Query: 321 KRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKC 380
R+L+ VRPN+ T+ + L AC ++G+L G+ I Y+ NG + NR + T+L+ M++KC
Sbjct: 294 WRMLEEGVRPNDLTVVSALLACTKIGALQVGERIHNYLSSNGFQLNRGIGTALVDMYAKC 353
Query: 381 GRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSI 440
G I A VF KDL WS MI G+AIHG DQAL F KM+ G+ PD V++ +I
Sbjct: 354 GNIKSASRVFVETKGKDLLTWSVMIWGWAIHGCFDQALQCFVKMKSA-GINPDEVIFLAI 412
Query: 441 LSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEV 500
L+ACSHSG VD GL+FF+SM+ ++ IEP+++HY +VDLLGRAGR D AL I MP+
Sbjct: 413 LTACSHSGNVDQGLNFFESMRLDYSIEPTMKHYTLIVDLLGRAGRLDEALSFIQSMPINP 472
Query: 501 QAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARG 560
+W L AC H N+E+ E A+ LL L P G+Y+ ++N++ + G W++ R
Sbjct: 473 DFVIWGALFCACRAHKNIEMAELTAEKLLQLEPKHPGSYVFLSNVYAAVGRWEDVERVRT 532
Query: 561 LMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKELHIKLLEAGYIAE 617
LM +R + K+PGWS +E++G V FVAGD +H + +I L+E+ + GY+ E
Sbjct: 533 LMKNRGVEKDPGWSYIEVEGQVHSFVAGDHAHVRAEEISLKLEEITASAKQEGYMPE 589
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 116/471 (24%), Positives = 225/471 (47%), Gaps = 43/471 (9%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+IR N FE ++S + ML+ + + T P VLK+ A + + G+ +H V+K+G
Sbjct: 109 LIRGLAENSRFEGSVSHFVLMLRLSIRPDRLTLPFVLKSVAALVDVGLGRCLHGGVMKLG 168
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLR--SVVSWNSIISAHSRACLNDEAI 118
+ D+FV+ L+DMY K + ++ DE P R + S++ WN +I+ + +A
Sbjct: 169 LEFDSFVRVSLVDMYVKIGELGFGLQLFDESPQRNKAESILLWNVLINGCCKVGDLSKAA 228
Query: 119 LVLKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKF 178
+ + M E +A ++ S+++G + +
Sbjct: 229 SLFEAM----PERNAGSWNSLING--------------------------------FVRN 252
Query: 179 GKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLI 238
G ++ AR +F ++ E ++VSWTT+I G+ G+ +A + +M V P+ + ++ +
Sbjct: 253 GDLDRARELFVQMPEKNVVSWTTMINGFSQNGDHEKALSMFWRMLEEGVRPNDLTVVSAL 312
Query: 239 LGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVF 298
L C ++G L + +H+ L +G+ + LV MY KCG+++ A RVF K +
Sbjct: 313 LACTKIGALQVGERIHNYLSSNGFQLNRGIGTALVDMYAKCGNIKSASRVFVETKGKDLL 372
Query: 299 LWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYI 358
W+ MI G+A G +A+ F ++ + P+E L+AC+ G++ +G E +
Sbjct: 373 TWSVMIWGWAIHGCFDQALQCFVKMKSAGINPDEVIFLAILTACSHSGNVDQGLNFFESM 432
Query: 359 VLN-GLESNRQVQTSLIHMFSKCGRINKAKEVFERVP-DKDLAVWSAMINGYAIHGMGDQ 416
L+ +E + T ++ + + GR+++A + +P + D +W A+ H +
Sbjct: 433 RLDYSIEPTMKHYTLIVDLLGRAGRLDEALSFIQSMPINPDFVIWGALFCACRAHKNIEM 492
Query: 417 ALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIE 467
A K+ +E P + V+ S + A G +D + +++ N G+E
Sbjct: 493 AELTAEKLLQLEPKHPGSYVFLSNVYAA--VGRWED-VERVRTLMKNRGVE 540
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 99/449 (22%), Positives = 188/449 (41%), Gaps = 90/449 (20%)
Query: 151 MHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVG 210
+H ++ L +N + ++S ++ A SIF ++ + +I G
Sbjct: 59 IHAQIFLHNLFSNS-RVVTQLISSSCSLKSLDYALSIFRCFDHPNLFVFNALIRGLAENS 117
Query: 211 NVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDN 270
+ M R+S+ PD + ++ A + ++ L +H ++K G + +
Sbjct: 118 RFEGSVSHFVLMLRLSIRPDRLTLPFVLKSVAALVDVGLGRCLHGGVMKLGLEFDSFVRV 177
Query: 271 LLVSMYTKCGDLELARRVFDAVLEK----SVFLWTSMIGGYAQLGYPSEAVNLFKRLLKT 326
LV MY K G+L ++FD ++ S+ LW +I G ++G S+A +LF+ +
Sbjct: 178 SLVDMYVKIGELGFGLQLFDESPQRNKAESILLWNVLINGCCKVGDLSKAASLFEAM--- 234
Query: 327 SVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKA 386
E N SLI+ F + G +++A
Sbjct: 235 ------------------------------------PERNAGSWNSLINGFVRNGDLDRA 258
Query: 387 KEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSH 446
+E+F ++P+K++ W+ MING++ +G ++AL++F++M EG++P+ + S L AC+
Sbjct: 259 RELFVQMPEKNVVSWTTMINGFSQNGDHEKALSMFWRMLE-EGVRPNDLTVVSALLACTK 317
Query: 447 SGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGR--------------------- 485
G + G + SN G + + LVD+ + G
Sbjct: 318 IGALQVGERIHNYLSSN-GFQLNRGIGTALVDMYAKCGNIKSASRVFVETKGKDLLTWSV 376
Query: 486 ----------FDLALKTIHEM------PVEVQAQVWAPLLSACMKHHNVELGEYAAKNL- 528
FD AL+ +M P EV ++ +L+AC NV+ G +++
Sbjct: 377 MIWGWAIHGCFDQALQCFVKMKSAGINPDEV---IFLAILTACSHSGNVDQGLNFFESMR 433
Query: 529 --LTLNPGSTGNYILMANLFTSAGMWKEA 555
++ P + +Y L+ +L AG EA
Sbjct: 434 LDYSIEP-TMKHYTLIVDLLGRAGRLDEA 461
>gi|297743099|emb|CBI35966.3| unnamed protein product [Vitis vinifera]
Length = 624
Score = 332 bits (850), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 205/612 (33%), Positives = 329/612 (53%), Gaps = 52/612 (8%)
Query: 51 RVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSR 110
++H+ L G + LID++S D+ +R VLD+ P + SWNS+I A++
Sbjct: 17 QIHAQTLIHGLPLQTHLIPKLIDLHS--IDY--ARFVLDQTPSP--TDFSWNSLIRAYTV 70
Query: 111 ACLNDEAILVLKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIP 166
++ + +M + S TF V+ CS +G +H V +LG +++
Sbjct: 71 HGSPQNSLFLYLKMLRSSTKPSNFTFPFVLKACSTLGSVLEGEQIHTHVLRLGF-GSDLF 129
Query: 167 LANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMS 226
+ NS++ MY K +++ AR+ +D++G VSW +II GYV G V +A L M
Sbjct: 130 VCNSLIDMYCKCFRLDSARNFWDDMGFRDEVSWNSIISGYVQWGQVEKARDL---FEEMP 186
Query: 227 VTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYN----------------------- 263
+ ++V + +I G + G+ LS+ +L S
Sbjct: 187 MRRNVVCWTAMINGYGKEGDFVEMLSLFRQMLVSADEVQPNAATMVCLLSACSTLCNYEV 246
Query: 264 ----------NEDPLDNLLVS----MYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQ 309
N+ PL+ +LV+ MY+KCGD+E A R+FD V K++ W ++I G Q
Sbjct: 247 GRFLSVFIDVNKIPLNTILVTALIDMYSKCGDVEKAWRIFDGVSCKNLPSWNAIITGCVQ 306
Query: 310 LGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQV 369
G EA++L++ + SV+PNE TL LSACA LG+L G+E+ Y+ NGL+ N +
Sbjct: 307 GGLLEEAIDLYRHMKAQSVKPNEITLVNVLSACAGLGALELGREVHLYLGRNGLDLNVIL 366
Query: 370 QTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEG 429
T+L+ M++KCG+I+ A +F + +KD+A+W+AMI G A HG G +L +F +M G
Sbjct: 367 ATALVDMYAKCGKIDDACLIFVKTSEKDVALWNAMILGLAYHGDGRDSLAVFSQMVRA-G 425
Query: 430 LKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLA 489
++P+ V + +LSAC+HSG+V++G F SM G+ P +EHY C+VDLLGRAG A
Sbjct: 426 VQPNDVTFIGVLSACNHSGLVEEGRVQFSSMADKHGLSPKLEHYACMVDLLGRAGHLKEA 485
Query: 490 LKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSA 549
+ + M + + +W LLSAC H N+EL + ++ ++ + G IL++N++ S+
Sbjct: 486 YELVQNMLIPPDSIIWGALLSACRIHRNLELADKISETIMASQDPNIGFCILLSNIYASS 545
Query: 550 GMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKELHIKL 609
G WK+ A R + ++R+ K G S VE+DG V FV D +H S +I + L L
Sbjct: 546 GRWKDVARVRRQVKEKRIKKPSGCSWVEVDGVVHRFVVEDTTHLKSGEIYGAYEILVNHL 605
Query: 610 LEAGYIAEADIV 621
GY+A D +
Sbjct: 606 KAEGYVANFDFI 617
Score = 209 bits (532), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 140/457 (30%), Positives = 233/457 (50%), Gaps = 55/457 (12%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+IR T +GS + +L Y ML++ ++FTFP VLKAC+ + S+ +G+++H+HVL++G
Sbjct: 64 LIRAYTVHGSPQNSLFLYLKMLRSSTKPSNFTFPFVLKACSTLGSVLEGEQIHTHVLRLG 123
Query: 61 FQQDAFVQTGLIDMYSKC---------------SDFVS----------------SRKVLD 89
F D FV LIDMY KC D VS +R + +
Sbjct: 124 FGSDLFVCNSLIDMYCKCFRLDSARNFWDDMGFRDEVSWNSIISGYVQWGQVEKARDLFE 183
Query: 90 EMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLEL--SASTFVSVVSGCSFRQ 147
EMP+R R+VV W ++I+ + + E + + ++M V E+ +A+T V ++S CS
Sbjct: 184 EMPMR-RNVVCWTAMINGYGKEGDFVEMLSLFRQMLVSADEVQPNAATMVCLLSACS--- 239
Query: 148 GISMHCCVYKLGLL------NNEIP----LANSVMSMYAKFGKVNEARSIFDEIGETSIV 197
C Y++G N+IP L +++ MY+K G V +A IFD + ++
Sbjct: 240 ----TLCNYEVGRFLSVFIDVNKIPLNTILVTALIDMYSKCGDVEKAWRIFDGVSCKNLP 295
Query: 198 SWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLL 257
SW II G V G + EA L M+ SV P+ + +N++ CA +G L L +H L
Sbjct: 296 SWNAIITGCVQGGLLEEAIDLYRHMKAQSVKPNEITLVNVLSACAGLGALELGREVHLYL 355
Query: 258 LKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAV 317
++G + L LV MY KCG ++ A +F EK V LW +MI G A G +++
Sbjct: 356 GRNGLDLNVILATALVDMYAKCGKIDDACLIFVKTSEKDVALWNAMILGLAYHGDGRDSL 415
Query: 318 NLFKRLLKTSVRPNEATLATTLSACAELGSLSKGK-EIEEYIVLNGLESNRQVQTSLIHM 376
+F ++++ V+PN+ T LSAC G + +G+ + +GL + ++ +
Sbjct: 416 AVFSQMVRAGVQPNDVTFIGVLSACNHSGLVEEGRVQFSSMADKHGLSPKLEHYACMVDL 475
Query: 377 FSKCGRINKAKEVFER--VPDKDLAVWSAMINGYAIH 411
+ G + +A E+ + +P D +W A+++ IH
Sbjct: 476 LGRAGHLKEAYELVQNMLIP-PDSIIWGALLSACRIH 511
>gi|225425100|ref|XP_002272744.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 622
Score = 331 bits (849), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 188/522 (36%), Positives = 296/522 (56%), Gaps = 36/522 (6%)
Query: 127 LGLELSASTFVSVVSGCSFRQGI-SMHCCVYKLGLLNNEIPLANSVMSMYA--KFGKVNE 183
L E +A+ + ++ CS + + +H + K GL+ +EIP A+ +++ A G +
Sbjct: 12 LSSESNAAQTLHLLQRCSNMEELRQIHGQMLKTGLILDEIP-ASKLLAFCASPNSGSLAY 70
Query: 184 ARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQ 243
AR++FD I + W T+I GY N EA L + M SV + F L+ C+
Sbjct: 71 ARTVFDRIFRPNTFMWNTMIRGYSNSKEPEEALLLYHHMLYHSVPHNAYTFPFLLKACSS 130
Query: 244 VGNLFLALSMHSLLLKSGYNNE------------------------DPLD-------NLL 272
+ L +H+ ++K G+ +E D +D N +
Sbjct: 131 MSALEETQQIHAHIIKMGFGSEIYTTNSLLNVYSKSGDIKSARLLFDQVDQRDTVSWNSM 190
Query: 273 VSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNE 332
+ YTKCG++E+A +F+ + E+++ WTSMI G G P EA+NLF R+ ++ +
Sbjct: 191 IDGYTKCGEIEMAYEIFNHMPERNIISWTSMISGCVGAGKPKEALNLFHRMQTAGIKLDN 250
Query: 333 ATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFER 392
L +TL ACA+LG L +GK I YI + +E + + LI M++KCG + +A EVF +
Sbjct: 251 VALVSTLQACADLGVLDQGKWIHAYIKKHEIEIDPILGCVLIDMYAKCGDLEEAIEVFRK 310
Query: 393 VPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDD 452
+ +K ++VW+AMI+GYAIHG G +AL F KMQ G++P+ + +T IL+ACSH+G+V +
Sbjct: 311 MEEKGVSVWTAMISGYAIHGRGREALEWFMKMQ-TAGVEPNQMTFTGILTACSHAGLVHE 369
Query: 453 GLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSAC 512
F+SM+ G +PSIEHY C+VDLLGRAG A + I MPV+ A +W LL+AC
Sbjct: 370 AKLLFESMERIHGFKPSIEHYGCMVDLLGRAGLLKEAEELIENMPVKPNAAIWGALLNAC 429
Query: 513 MKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPG 572
H N+ELG+ K L+ ++PG G YI +A++ +AG W +AA R M ++ ++K PG
Sbjct: 430 HIHGNLELGKQIGKILIQVDPGHGGRYIHLASIHAAAGEWNQAARVRRQMKEQGVSKLPG 489
Query: 573 WSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKELHIKLLEAGY 614
S + ++G+ F+AGD SH +I L+++ +L E GY
Sbjct: 490 CSVISVNGTAHEFLAGDESHPQIKEIDHMLEQIVERLREEGY 531
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 111/416 (26%), Positives = 200/416 (48%), Gaps = 45/416 (10%)
Query: 36 VLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYS--KCSDFVSSRKVLDEMPV 93
+L+ C+N+ + +++H +LK G D + L+ + +R V D +
Sbjct: 24 LLQRCSNMEEL---RQIHGQMLKTGLILDEIPASKLLAFCASPNSGSLAYARTVFDR--I 78
Query: 94 RLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCS----FRQGI 149
+ WN++I +S + +EA+L+ M + +A TF ++ CS +
Sbjct: 79 FRPNTFMWNTMIRGYSNSKEPEEALLLYHHMLYHSVPHNAYTFPFLLKACSSMSALEETQ 138
Query: 150 SMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIG----------------- 192
+H + K+G +EI NS++++Y+K G + AR +FD++
Sbjct: 139 QIHAHIIKMG-FGSEIYTTNSLLNVYSKSGDIKSARLLFDQVDQRDTVSWNSMIDGYTKC 197
Query: 193 --------------ETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLI 238
E +I+SWT++I G V G EA L ++M+ + D V ++ +
Sbjct: 198 GEIEMAYEIFNHMPERNIISWTSMISGCVGAGKPKEALNLFHRMQTAGIKLDNVALVSTL 257
Query: 239 LGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVF 298
CA +G L +H+ + K + L +L+ MY KCGDLE A VF + EK V
Sbjct: 258 QACADLGVLDQGKWIHAYIKKHEIEIDPILGCVLIDMYAKCGDLEEAIEVFRKMEEKGVS 317
Query: 299 LWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYI 358
+WT+MI GYA G EA+ F ++ V PN+ T L+AC+ G + + K + E +
Sbjct: 318 VWTAMISGYAIHGRGREALEWFMKMQTAGVEPNQMTFTGILTACSHAGLVHEAKLLFESM 377
Query: 359 -VLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDK-DLAVWSAMINGYAIHG 412
++G + + + ++ + + G + +A+E+ E +P K + A+W A++N IHG
Sbjct: 378 ERIHGFKPSIEHYGCMVDLLGRAGLLKEAEELIENMPVKPNAAIWGALLNACHIHG 433
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 107/433 (24%), Positives = 193/433 (44%), Gaps = 70/433 (16%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MIR +N+ EE L Y ML V N++TFP +LKAC++++++ + +++H+H++K+G
Sbjct: 89 MIRGYSNSKEPEEALLLYHHMLYHSVPHNAYTFPFLLKACSSMSALEETQQIHAHIIKMG 148
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVR-------------------------- 94
F + + L+++YSK D S+R + D++ R
Sbjct: 149 FGSEIYTTNSLLNVYSKSGDIKSARLLFDQVDQRDTVSWNSMIDGYTKCGEIEMAYEIFN 208
Query: 95 ---LRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCS----FRQ 147
R+++SW S+IS A EA+ + M G++L VS + C+ Q
Sbjct: 209 HMPERNIISWTSMISGCVGAGKPKEALNLFHRMQTAGIKLDNVALVSTLQACADLGVLDQ 268
Query: 148 GISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYV 207
G +H + K + + I L ++ MYAK G + EA +F ++ E + WT +I GY
Sbjct: 269 GKWIHAYIKKHEIEIDPI-LGCVLIDMYAKCGDLEEAIEVFRKMEEKGVSVWTAMISGYA 327
Query: 208 NVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDP 267
G EA +M+ V P+ + F ++ C+ G + A LL +S
Sbjct: 328 IHGRGREALEWFMKMQTAGVEPNQMTFTGILTACSHAGLVHEA----KLLFES------- 376
Query: 268 LDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTS 327
R+ + S+ + M+ + G EA L + +
Sbjct: 377 -----------------MERIHG--FKPSIEHYGCMVDLLGRAGLLKEAEELIENM---P 414
Query: 328 VRPNEATLATTLSACAELGSLSKGKEIEEYIV-LNGLESNRQVQTSLIHMFSKCGRINKA 386
V+PN A L+AC G+L GK+I + ++ ++ R + + IH + G N+A
Sbjct: 415 VKPNAAIWGALLNACHIHGNLELGKQIGKILIQVDPGHGGRYIHLASIH--AAAGEWNQA 472
Query: 387 KEVFERVPDKDLA 399
V ++ ++ ++
Sbjct: 473 ARVRRQMKEQGVS 485
>gi|115459098|ref|NP_001053149.1| Os04g0488200 [Oryza sativa Japonica Group]
gi|38344239|emb|CAD41332.2| OJ991113_30.16 [Oryza sativa Japonica Group]
gi|113564720|dbj|BAF15063.1| Os04g0488200 [Oryza sativa Japonica Group]
gi|125548801|gb|EAY94623.1| hypothetical protein OsI_16400 [Oryza sativa Indica Group]
Length = 598
Score = 331 bits (849), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 166/484 (34%), Positives = 269/484 (55%), Gaps = 9/484 (1%)
Query: 128 GLELSASTFVSVVSGCSFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSI 187
G L A+ G R+G H K G L +P+ N++++ Y G+ +AR +
Sbjct: 117 GYTLPAALKACARLGGGLREGCQAHAVAEKAGFLG-RVPVQNALVTFYGACGQCGDARKV 175
Query: 188 FDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNL 247
FDE+ E +VSWT ++ + G EA G+ + M VTP+ V ++++ C +G
Sbjct: 176 FDEMAERDVVSWTALLSAFTRGGMFMEALGV---LAEMDVTPNEVTLASVLVACGNLGTA 232
Query: 248 FLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGY 307
++H + + N L+ MY KC L+LARRVFD +L + + WT MI G
Sbjct: 233 RAGKAVHGWYFRREKELNLIVGNALLDMYVKCEKLDLARRVFDMLLARDIVSWTVMISGL 292
Query: 308 AQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNR 367
Q PSEA+ +F + + V+P++ L+T LSACA LG+L G+ + EYI G+E +
Sbjct: 293 VQCKRPSEALEVFNAMQISGVKPDKVVLSTVLSACASLGALESGRWVHEYIERKGIEWDV 352
Query: 368 QVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHV 427
V TS++ M+ KCG ++ A +F+ +P K+++ W+A+ING+A+HG G +AL+ F +M
Sbjct: 353 HVGTSVVDMYVKCGCLDTAVSIFQEMPLKNVSSWNALINGFALHGRGREALDCFDRMV-A 411
Query: 428 EGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFD 487
GL P+ V + ++L AC HSG+V +G F+ M ++ + P +HY C+VDLLGRAG
Sbjct: 412 SGLHPNEVTFITVLGACCHSGLVQEGRQLFELMTKSYKLSPWEDHYGCMVDLLGRAGLIQ 471
Query: 488 LALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFT 547
A I MP+ W LLSAC H ++ + ++ L G Y+L++N++
Sbjct: 472 EAYDVIKAMPMRPGVFTWVTLLSACQAHGRMDFSQQILMHIHELESSGNGIYVLLSNMYA 531
Query: 548 SAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTL----K 603
+ W + ARG M+++ + KEPG S +E++G F+ G ++H D+R L K
Sbjct: 532 VSDRWADVGKARGFMNEKGMQKEPGSSVIEVNGKTCEFLVGQQNHLYMDDVRAMLSILMK 591
Query: 604 ELHI 607
++H+
Sbjct: 592 QIHL 595
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 122/409 (29%), Positives = 204/409 (49%), Gaps = 7/409 (1%)
Query: 24 TGVHGNSFTFPLVLKACANINS-IWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFV 82
G + +T P LKACA + + +G + H+ K GF VQ L+ Y C
Sbjct: 111 AGARPDGYTLPAALKACARLGGGLREGCQAHAVAEKAGFLGRVPVQNALVTFYGACGQCG 170
Query: 83 SSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELS-ASTFVSVVS 141
+RKV DEM R VVSW +++SA +R + EA+ VL EM V E++ AS V+ +
Sbjct: 171 DARKVFDEMAE--RDVVSWTALLSAFTRGGMFMEALGVLAEMDVTPNEVTLASVLVACGN 228
Query: 142 GCSFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTT 201
+ R G ++H ++ N I + N+++ MY K K++ AR +FD + IVSWT
Sbjct: 229 LGTARAGKAVHGWYFRREKELNLI-VGNALLDMYVKCEKLDLARRVFDMLLARDIVSWTV 287
Query: 202 IIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSG 261
+I G V +EA + N M+ V PD VV ++ CA +G L +H + + G
Sbjct: 288 MISGLVQCKRPSEALEVFNAMQISGVKPDKVVLSTVLSACASLGALESGRWVHEYIERKG 347
Query: 262 YNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFK 321
+ + +V MY KCG L+ A +F + K+V W ++I G+A G EA++ F
Sbjct: 348 IEWDVHVGTSVVDMYVKCGCLDTAVSIFQEMPLKNVSSWNALINGFALHGRGREALDCFD 407
Query: 322 RLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLN-GLESNRQVQTSLIHMFSKC 380
R++ + + PNE T T L AC G + +G+++ E + + L ++ + +
Sbjct: 408 RMVASGLHPNEVTFITVLGACCHSGLVQEGRQLFELMTKSYKLSPWEDHYGCMVDLLGRA 467
Query: 381 GRINKAKEVFERVPDKD-LAVWSAMINGYAIHGMGDQALNLFYKMQHVE 428
G I +A +V + +P + + W +++ HG D + + + +E
Sbjct: 468 GLIQEAYDVIKAMPMRPGVFTWVTLLSACQAHGRMDFSQQILMHIHELE 516
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 80/307 (26%), Positives = 134/307 (43%), Gaps = 16/307 (5%)
Query: 6 TNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDA 65
T G F E L + M V N T VL AC N+ + GK VH + + +
Sbjct: 195 TRGGMFMEALGVLAEM---DVTPNEVTLASVLVACGNLGTARAGKAVHGWYFRREKELNL 251
Query: 66 FVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMW 125
V L+DMY KC +R+V D + R +VSW +IS + EA+ V M
Sbjct: 252 IVGNALLDMYVKCEKLDLARRVFDMLLA--RDIVSWTVMISGLVQCKRPSEALEVFNAMQ 309
Query: 126 VLGLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKV 181
+ G++ +V+S C + G +H + + G + ++ + SV+ MY K G +
Sbjct: 310 ISGVKPDKVVLSTVLSACASLGALESGRWVHEYIERKG-IEWDVHVGTSVVDMYVKCGCL 368
Query: 182 NEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGC 241
+ A SIF E+ ++ SW +I G+ G EA ++M + P+ V F+ ++ C
Sbjct: 369 DTAVSIFQEMPLKNVSSWNALINGFALHGRGREALDCFDRMVASGLHPNEVTFITVLGAC 428
Query: 242 AQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAV----LEKSV 297
G + + L+ KS P ++ M G L + +D + + V
Sbjct: 429 CHSGLVQEGRQLFELMTKS--YKLSPWEDHYGCMVDLLGRAGLIQEAYDVIKAMPMRPGV 486
Query: 298 FLWTSMI 304
F W +++
Sbjct: 487 FTWVTLL 493
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 28/123 (22%), Positives = 60/123 (48%), Gaps = 9/123 (7%)
Query: 8 NGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVH---SHVLKVGFQQD 64
+G E L + M+ +G+H N TF VL AC + + +G+++ + K+ +D
Sbjct: 396 HGRGREALDCFDRMVASGLHPNEVTFITVLGACCHSGLVQEGRQLFELMTKSYKLSPWED 455
Query: 65 AFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIIS---AHSRACLNDEAILVL 121
+ ++D+ + + V+ MP+R V +W +++S AH R + + ++ +
Sbjct: 456 HY--GCMVDLLGRAGLIQEAYDVIKAMPMR-PGVFTWVTLLSACQAHGRMDFSQQILMHI 512
Query: 122 KEM 124
E+
Sbjct: 513 HEL 515
>gi|302759917|ref|XP_002963381.1| hypothetical protein SELMODRAFT_80412 [Selaginella moellendorffii]
gi|300168649|gb|EFJ35252.1| hypothetical protein SELMODRAFT_80412 [Selaginella moellendorffii]
Length = 860
Score = 331 bits (849), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 182/559 (32%), Positives = 305/559 (54%), Gaps = 22/559 (3%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI G E L Y M + + VL+AC+ + ++ G+ VHS +
Sbjct: 307 MIAAYNQRGYSMEALELYHCM---DIEPDDIALSNVLQACSRLKNLEQGRAVHSRIASRD 363
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F+ VQT L+DMY KC D +R+ D + R V+SW S+I+A+S EA+ V
Sbjct: 364 FEPSLMVQTLLVDMYVKCGDLAEARRTFDGF--KARDVISWTSLITAYSHENFGREALEV 421
Query: 121 LKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
M + G+E ++ TF +V+ CS G ++H V G +++E + N+++SMY+
Sbjct: 422 FHSMELEGVEPNSITFCTVIDACSRLSSLLPGRALHSRVVATGHISDEF-VGNALVSMYS 480
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
KFG+V+ AR +FD I SW ++ G+ +EA + +++ P +F
Sbjct: 481 KFGRVDFARMVFDSIPVKRYPSWRVMLVALTQNGHSHEALEMYSRIHLEGFRPGSPIFSA 540
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
++ C + ++ A ++H ++ S + + L N+L+++Y KCG+LE AR VFD + EK+
Sbjct: 541 ALVSCTALEDVSRARAIHGVIKSSDFYPDLVLSNVLMNVYAKCGELEKARLVFDQMTEKN 600
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEE 356
WT+MIGGYAQ G P+EA+ L+K + V+PN +S+CA+LG+L +G+ +
Sbjct: 601 EVSWTTMIGGYAQNGRPAEALELYKAM---DVQPNFIAFVPVISSCADLGALVEGQRVHA 657
Query: 357 YIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQ 416
+ GL++N + T+L++M++KCG++ A+E F+ D W++M YA G G Q
Sbjct: 658 RLSDAGLQNNEVIVTALVNMYAKCGKLGLAREFFDSTYCPDAGAWNSMATAYAQFGHGSQ 717
Query: 417 ALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCL 476
L L+ +M ++G++P+ + S+L ACSH GM+++ F+ M ++ GI P+ EHY C+
Sbjct: 718 VLELYREMC-LQGVQPNGITLLSVLVACSHMGMLEECEHRFECMVADHGIAPTSEHYSCM 776
Query: 477 VDLLGRAGRFDLALKTIH--------EMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNL 528
DLLGR+GR + A K + E V W L AC H++ AA+ L
Sbjct: 777 TDLLGRSGRLEEAEKVVKMASGESGSEAASPVAVSAWMSFLGACKTHNDWGRAAGAAEKL 836
Query: 529 LTLNPGSTGNYILMANLFT 547
L+P + Y+L++ ++
Sbjct: 837 YELDPEDSAPYVLLSQTYS 855
Score = 246 bits (627), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 155/551 (28%), Positives = 273/551 (49%), Gaps = 32/551 (5%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI G E L Y M + GV N TF VL ACA + + GK+VH + +
Sbjct: 1 MISAYAQKGYHREALELYEEMDERGVDPNDKTFACVLSACAGLKDMERGKKVHRRIRESV 60
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+ D +Q L+++Y+KC D SR++ + M R+V +WN++I+A+ + EA+
Sbjct: 61 ARVDTVLQNALLNLYAKCGDLEESRRIFEAM--ERRTVATWNTMITAYVQHDFFQEALEA 118
Query: 121 LKEMWVLGLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIP----LANSVM 172
+ M S+ TF SV+ C G ++H ++G + +I L NS++
Sbjct: 119 FRRM---DAPPSSITFTSVLGACCSPDDLETGKAIH---RQIGGSSPQIQADEILQNSLV 172
Query: 173 SMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVG---NVNEAFGLCNQMRRMSVTP 229
+MY K G + +A +F I + SWT +I Y G E FG + M V P
Sbjct: 173 TMYGKCGSLEDAERVFHGIRRKNAFSWTAMITAYAQNGYERRAIEVFG--DMMSEGRVEP 230
Query: 230 DLVVFLNLILGCAQVGNLFLALSMHSLLLKS---GYNNEDPLDNLLVSMYTKCGDLELAR 286
D + + ++ C+ +G+L + +H+L+ + G +D L + ++S++ +CG L R
Sbjct: 231 DPITYAGVLTACSTLGDLETGMRIHALIHRIYTLGLEYDDVLQDGILSLHARCGSLVGTR 290
Query: 287 RVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELG 346
+FD + ++V WT+MI Y Q GY EA+ L+ + + P++ L+ L AC+ L
Sbjct: 291 EMFDRMPHRTVVTWTTMIAAYNQRGYSMEALELYHCM---DIEPDDIALSNVLQACSRLK 347
Query: 347 SLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMIN 406
+L +G+ + I E + VQT L+ M+ KCG + +A+ F+ +D+ W+++I
Sbjct: 348 NLEQGRAVHSRIASRDFEPSLMVQTLLVDMYVKCGDLAEARRTFDGFKARDVISWTSLIT 407
Query: 407 GYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGI 466
Y+ G +AL +F+ M+ +EG++P+++ + +++ ACS + G + + + I
Sbjct: 408 AYSHENFGREALEVFHSME-LEGVEPNSITFCTVIDACSRLSSLLPGRALHSRVVATGHI 466
Query: 467 EPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMK--HHNVELGEYA 524
LV + + GR D A +PV+ + W +L A + H + L Y+
Sbjct: 467 SDEFVGN-ALVSMYSKFGRVDFARMVFDSIPVK-RYPSWRVMLVALTQNGHSHEALEMYS 524
Query: 525 AKNLLTLNPGS 535
+L PGS
Sbjct: 525 RIHLEGFRPGS 535
Score = 212 bits (540), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 128/498 (25%), Positives = 255/498 (51%), Gaps = 21/498 (4%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTG-VHGNSFTFPLVLKACANINSIWDGKRVHSHVLKV 59
MI NG + + M+ G V + T+ VL AC+ + + G R+H+ + ++
Sbjct: 202 MITAYAQNGYERRAIEVFGDMMSEGRVEPDPITYAGVLTACSTLGDLETGMRIHALIHRI 261
Query: 60 ---GFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDE 116
G + D +Q G++ ++++C V +R++ D MP R+VV+W ++I+A+++ + E
Sbjct: 262 YTLGLEYDDVLQDGILSLHARCGSLVGTREMFDRMP--HRTVVTWTTMIAAYNQRGYSME 319
Query: 117 AILVLKEMW-VLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSV 171
A+ E++ + +E +V+ CS QG ++H + + + +
Sbjct: 320 AL----ELYHCMDIEPDDIALSNVLQACSRLKNLEQGRAVHSRIASRDF-EPSLMVQTLL 374
Query: 172 MSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDL 231
+ MY K G + EAR FD ++SWT++I Y + EA + + M V P+
Sbjct: 375 VDMYVKCGDLAEARRTFDGFKARDVISWTSLITAYSHENFGREALEVFHSMELEGVEPNS 434
Query: 232 VVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDA 291
+ F +I C+++ +L ++HS ++ +G+ +++ + N LVSMY+K G ++ AR VFD+
Sbjct: 435 ITFCTVIDACSRLSSLLPGRALHSRVVATGHISDEFVGNALVSMYSKFGRVDFARMVFDS 494
Query: 292 VLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKG 351
+ K W M+ Q G+ EA+ ++ R+ RP + L +C L +S+
Sbjct: 495 IPVKRYPSWRVMLVALTQNGHSHEALEMYSRIHLEGFRPGSPIFSAALVSCTALEDVSRA 554
Query: 352 KEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIH 411
+ I I + + + L+++++KCG + KA+ VF+++ +K+ W+ MI GYA +
Sbjct: 555 RAIHGVIKSSDFYPDLVLSNVLMNVYAKCGELEKARLVFDQMTEKNEVSWTTMIGGYAQN 614
Query: 412 GMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIE 471
G +AL L+ M ++P+ + + ++S+C+ G + +G + S+ G++ +
Sbjct: 615 GRPAEALELYKAMD----VQPNFIAFVPVISSCADLGALVEGQRVHARL-SDAGLQNNEV 669
Query: 472 HYLCLVDLLGRAGRFDLA 489
LV++ + G+ LA
Sbjct: 670 IVTALVNMYAKCGKLGLA 687
>gi|356553819|ref|XP_003545249.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g34400-like [Glycine max]
Length = 608
Score = 331 bits (849), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 171/468 (36%), Positives = 274/468 (58%), Gaps = 3/468 (0%)
Query: 152 HCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGN 211
H V+KL L +++ +S+++MY++ G+V AR +FDEI +VSW ++I GY G
Sbjct: 139 HSLVFKLAL-HSDPHTTHSLITMYSRCGRVAFARKVFDEIPRRDLVSWNSMIAGYAKAGC 197
Query: 212 VNEAFGLCNQM-RRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDN 270
EA + +M RR PD + ++++ C ++G+L L + +++ G + +
Sbjct: 198 AREAVEVFGEMGRRDGFEPDEMSLVSVLGACGELGDLELGRWVEGFVVERGMTLNSYIGS 257
Query: 271 LLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRP 330
L+SMY KCGDL ARR+FD + + V W ++I GYAQ G EA++LF + + V
Sbjct: 258 ALISMYAKCGDLGSARRIFDGMAARDVITWNAVISGYAQNGMADEAISLFHAMKEDCVTE 317
Query: 331 NEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVF 390
N+ TL LSACA +G+L GK+I+EY G + + V T+LI M++KCG + A+ VF
Sbjct: 318 NKITLTAVLSACATIGALDLGKQIDEYASQRGFQHDIFVATALIDMYAKCGSLASAQRVF 377
Query: 391 ERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKM-QHVEGLKPDAVVYTSILSACSHSGM 449
+ +P K+ A W+AMI+ A HG +AL+LF M G +P+ + + +LSAC H+G+
Sbjct: 378 KEMPQKNEASWNAMISALASHGKAKEALSLFQCMSDEGGGARPNDITFVGLLSACVHAGL 437
Query: 450 VDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLL 509
V++G F M + FG+ P IEHY C+VDLL RAG A I +MP + LL
Sbjct: 438 VNEGYRLFDMMSTLFGLVPKIEHYSCMVDLLARAGHLYEAWDLIEKMPEKPDKVTLGALL 497
Query: 510 SACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTK 569
AC NV++GE + +L ++P ++GNYI+ + ++ + MW+++A R LM + +TK
Sbjct: 498 GACRSKKNVDIGERVIRMILEVDPSNSGNYIISSKIYANLNMWEDSARMRLLMRQKGITK 557
Query: 570 EPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKELHIKLLEAGYIAE 617
PG S +E++ + F AGD S+D+ + L+ +L GY+ +
Sbjct: 558 TPGCSWIEVENHLHEFHAGDGLCLDSIDLSNIIDLLYEELKREGYVPK 605
Score = 179 bits (453), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 110/366 (30%), Positives = 186/366 (50%), Gaps = 11/366 (3%)
Query: 39 ACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSV 98
+CAN+ + + HS V K+ D LI MYS+C +RKV DE+P R +
Sbjct: 125 SCANLAVLSPARAAHSLVFKLALHSDPHTTHSLITMYSRCGRVAFARKVFDEIP--RRDL 182
Query: 99 VSWNSIISAHSRACLNDEAILVLKEMWVL-GLELSASTFVSVVSGC----SFRQGISMHC 153
VSWNS+I+ +++A EA+ V EM G E + VSV+ C G +
Sbjct: 183 VSWNSMIAGYAKAGCAREAVEVFGEMGRRDGFEPDEMSLVSVLGACGELGDLELGRWVEG 242
Query: 154 CVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVN 213
V + G+ N + ++++SMYAK G + AR IFD + +++W +I GY G +
Sbjct: 243 FVVERGMTLNSY-IGSALISMYAKCGDLGSARRIFDGMAARDVITWNAVISGYAQNGMAD 301
Query: 214 EAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLV 273
EA L + M+ VT + + ++ CA +G L L + + G+ ++ + L+
Sbjct: 302 EAISLFHAMKEDCVTENKITLTAVLSACATIGALDLGKQIDEYASQRGFQHDIFVATALI 361
Query: 274 SMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKT--SVRPN 331
MY KCG L A+RVF + +K+ W +MI A G EA++LF+ + RPN
Sbjct: 362 DMYAKCGSLASAQRVFKEMPQKNEASWNAMISALASHGKAKEALSLFQCMSDEGGGARPN 421
Query: 332 EATLATTLSACAELGSLSKGKEIEEYI-VLNGLESNRQVQTSLIHMFSKCGRINKAKEVF 390
+ T LSAC G +++G + + + L GL + + ++ + ++ G + +A ++
Sbjct: 422 DITFVGLLSACVHAGLVNEGYRLFDMMSTLFGLVPKIEHYSCMVDLLARAGHLYEAWDLI 481
Query: 391 ERVPDK 396
E++P+K
Sbjct: 482 EKMPEK 487
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/258 (27%), Positives = 112/258 (43%), Gaps = 52/258 (20%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+I NG +E +S + +M + V N T VL ACA I ++ GK++ + + G
Sbjct: 290 VISGYAQNGMADEAISLFHAMKEDCVTENKITLTAVLSACATIGALDLGKQIDEYASQRG 349
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISA---HSRA------ 111
FQ D FV T LIDMY+KC S+++V EMP ++ SWN++ISA H +A
Sbjct: 350 FQHDIFVATALIDMYAKCGSLASAQRVFKEMPQ--KNEASWNAMISALASHGKAKEALSL 407
Query: 112 --CLNDEAILVLKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGLLNNEIPLAN 169
C++DE G + TFV ++S C GL+N L +
Sbjct: 408 FQCMSDEGG---------GARPNDITFVGLLSAC------------VHAGLVNEGYRLFD 446
Query: 170 SVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTP 229
+ +++ K+ + D + G++ EA+ L + +M P
Sbjct: 447 MMSTLFGLVPKIEHYSCMVDLLARA---------------GHLYEAWDL---IEKMPEKP 488
Query: 230 DLVVFLNLILGCAQVGNL 247
D V L+ C N+
Sbjct: 489 DKVTLGALLGACRSKKNV 506
>gi|359488555|ref|XP_003633777.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like, partial [Vitis vinifera]
Length = 825
Score = 331 bits (849), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 193/609 (31%), Positives = 325/609 (53%), Gaps = 9/609 (1%)
Query: 11 FEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTG 70
F+E + M + G + TF +L C +V + ++K+G+ V
Sbjct: 130 FKEAFELFVQMQRCGTEPDYVTFVTLLSGCNGHEMGNQITQVQTQIIKLGYDSRLIVGNT 189
Query: 71 LIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLE 130
L+D Y K + + ++ EMP + SV S+N++I+ +S+ L+++A+ + EM GL+
Sbjct: 190 LVDSYCKSNRLDLACQLFKEMP-EIDSV-SYNAMITGYSKDGLDEKAVNLFVEMQNSGLK 247
Query: 131 LSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARS 186
+ TF +V+ G +H V K + N + ++N+++ Y+K V +AR
Sbjct: 248 PTEFTFAAVLCANIGLDDIVLGQQIHSFVIKTNFVWN-VFVSNALLDFYSKHDSVIDARK 306
Query: 187 IFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGN 246
+FDE+ E VS+ II GY G AF L +++ + F ++ + +
Sbjct: 307 LFDEMPEQDGVSYNVIISGYAWDGKHKYAFDLFRELQFTAFDRKQFPFATMLSIASNTLD 366
Query: 247 LFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGG 306
+ +H+ + + ++E + N LV MY KCG E A +F + +S WT+MI
Sbjct: 367 WEMGRQIHAQTIVTTADSEILVGNSLVDMYAKCGKFEEAEMIFTNLTHRSAVPWTAMISA 426
Query: 307 YAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESN 366
Y Q G+ E + LF ++ + SV ++AT A+ L A A + SLS GK++ +I+ +G SN
Sbjct: 427 YVQKGFYEEGLQLFNKMRQASVIADQATFASLLRASASIASLSLGKQLHSFIIKSGFMSN 486
Query: 367 RQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQH 426
++L+ +++KCG I A + F+ +PD+++ W+AMI+ YA +G + L F +M
Sbjct: 487 VFSGSALLDVYAKCGSIKDAVQTFQEMPDRNIVSWNAMISAYAQNGEAEATLKSFKEMV- 545
Query: 427 VEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRF 486
+ GL+PD+V + +LSACSHSG+V++GL F SM + ++P EHY +VD+L R+GRF
Sbjct: 546 LSGLQPDSVSFLGVLSACSHSGLVEEGLWHFNSMTQIYKLDPRREHYASVVDMLCRSGRF 605
Query: 487 DLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNP-GSTGNYILMANL 545
+ A K + EMP++ +W+ +L+AC H N EL AA L + Y+ M+N+
Sbjct: 606 NEAEKLMAEMPIDPDEIMWSSVLNACRIHKNQELARRAADQLFNMEELRDAAPYVNMSNI 665
Query: 546 FTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKEL 605
+ +AG W+ + M DR + K P +S VEI +F A DR H +IRK + L
Sbjct: 666 YAAAGQWENVSKVHKAMRDRGVKKLPAYSWVEIKHETHMFSANDRCHPQIEEIRKKIDML 725
Query: 606 HIKLLEAGY 614
+ E GY
Sbjct: 726 TKTMEELGY 734
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 136/469 (28%), Positives = 240/469 (51%), Gaps = 14/469 (2%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANI--NSIWDGKRVHSHVLK 58
MI + +G E+ ++ + M +G+ FTF VL CANI + I G+++HS V+K
Sbjct: 221 MITGYSKDGLDEKAVNLFVEMQNSGLKPTEFTFAAVL--CANIGLDDIVLGQQIHSFVIK 278
Query: 59 VGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAI 118
F + FV L+D YSK + +RK+ DEMP + VS+N IIS ++ + A
Sbjct: 279 TNFVWNVFVSNALLDFYSKHDSVIDARKLFDEMPEQ--DGVSYNVIISGYAWDGKHKYAF 336
Query: 119 LVLKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSM 174
+ +E+ + F +++S S + G +H + ++EI + NS++ M
Sbjct: 337 DLFRELQFTAFDRKQFPFATMLSIASNTLDWEMGRQIHAQTI-VTTADSEILVGNSLVDM 395
Query: 175 YAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVF 234
YAK GK EA IF + S V WT +I YV G E L N+MR+ SV D F
Sbjct: 396 YAKCGKFEEAEMIFTNLTHRSAVPWTAMISAYVQKGFYEEGLQLFNKMRQASVIADQATF 455
Query: 235 LNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLE 294
+L+ A + +L L +HS ++KSG+ + + L+ +Y KCG ++ A + F + +
Sbjct: 456 ASLLRASASIASLSLGKQLHSFIIKSGFMSNVFSGSALLDVYAKCGSIKDAVQTFQEMPD 515
Query: 295 KSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGK-E 353
+++ W +MI YAQ G + FK ++ + ++P+ + LSAC+ G + +G
Sbjct: 516 RNIVSWNAMISAYAQNGEAEATLKSFKEMVLSGLQPDSVSFLGVLSACSHSGLVEEGLWH 575
Query: 354 IEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVP-DKDLAVWSAMINGYAIHG 412
+ L+ R+ S++ M + GR N+A+++ +P D D +WS+++N IH
Sbjct: 576 FNSMTQIYKLDPRREHYASVVDMLCRSGRFNEAEKLMAEMPIDPDEIMWSSVLNACRIHK 635
Query: 413 MGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQ 461
+ A ++ ++E L+ DA Y ++ + + +G ++ K+M+
Sbjct: 636 NQELARRAADQLFNMEELR-DAAPYVNMSNIYAAAGQWENVSKVHKAMR 683
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 124/476 (26%), Positives = 221/476 (46%), Gaps = 22/476 (4%)
Query: 71 LIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLE 130
+I Y K + +RK+ D M R + V+W +I +S+ EA + +M G E
Sbjct: 89 MISGYVKSGNLGEARKLFDGMVER--TAVTWTILIGGYSQLNQFKEAFELFVQMQRCGTE 146
Query: 131 LSASTFVSVVSGCSFR----QGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARS 186
TFV+++SGC+ Q + + KLG ++ + + N+++ Y K +++ A
Sbjct: 147 PDYVTFVTLLSGCNGHEMGNQITQVQTQIIKLGY-DSRLIVGNTLVDSYCKSNRLDLACQ 205
Query: 187 IFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVG- 245
+F E+ E VS+ +I GY G +A L +M+ + P F ++ CA +G
Sbjct: 206 LFKEMPEIDSVSYNAMITGYSKDGLDEKAVNLFVEMQNSGLKPTEFTFAAVL--CANIGL 263
Query: 246 -NLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMI 304
++ L +HS ++K+ + + N L+ Y+K + AR++FD + E+ + +I
Sbjct: 264 DDIVLGQQIHSFVIKTNFVWNVFVSNALLDFYSKHDSVIDARKLFDEMPEQDGVSYNVII 323
Query: 305 GGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLE 364
GYA G A +LF+ L T+ + AT LS + G++I ++ +
Sbjct: 324 SGYAWDGKHKYAFDLFRELQFTAFDRKQFPFATMLSIASNTLDWEMGRQIHAQTIVTTAD 383
Query: 365 SNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKM 424
S V SL+ M++KCG+ +A+ +F + + W+AMI+ Y G ++ L LF KM
Sbjct: 384 SEILVGNSLVDMYAKCGKFEEAEMIFTNLTHRSAVPWTAMISAYVQKGFYEEGLQLFNKM 443
Query: 425 QHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQS---NFGIEPSIEHYLCLVDLLG 481
+ + D + S+L A + LS K + S G ++ L+D+
Sbjct: 444 RQASVI-ADQATFASLLRASASIA----SLSLGKQLHSFIIKSGFMSNVFSGSALLDVYA 498
Query: 482 RAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVE--LGEYAAKNLLTLNPGS 535
+ G A++T EMP + W ++SA ++ E L + L L P S
Sbjct: 499 KCGSIKDAVQTFQEMP-DRNIVSWNAMISAYAQNGEAEATLKSFKEMVLSGLQPDS 553
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 102/358 (28%), Positives = 180/358 (50%), Gaps = 13/358 (3%)
Query: 169 NSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVT 228
N ++S Y K G + EAR +FD + E + V+WT +IGGY + EAF L QM+R
Sbjct: 87 NMMISGYVKSGNLGEARKLFDGMVERTAVTWTILIGGYSQLNQFKEAFELFVQMQRCGTE 146
Query: 229 PDLVVFLNLILGC--AQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELAR 286
PD V F+ L+ GC ++GN + + ++K GY++ + N LV Y K L+LA
Sbjct: 147 PDYVTFVTLLSGCNGHEMGNQI--TQVQTQIIKLGYDSRLIVGNTLVDSYCKSNRLDLAC 204
Query: 287 RVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELG 346
++F + E + +MI GY++ G +AVNLF + + ++P E T A L A L
Sbjct: 205 QLFKEMPEIDSVSYNAMITGYSKDGLDEKAVNLFVEMQNSGLKPTEFTFAAVLCANIGLD 264
Query: 347 SLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMIN 406
+ G++I +++ N V +L+ +SK + A+++F+ +P++D ++ +I+
Sbjct: 265 DIVLGQQIHSFVIKTNFVWNVFVSNALLDFYSKHDSVIDARKLFDEMPEQDGVSYNVIIS 324
Query: 407 GYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGI 466
GYA G A +LF ++Q + ++LS S++ + G + + + +
Sbjct: 325 GYAWDGKHKYAFDLFRELQFT-AFDRKQFPFATMLSIASNTLDWEMG----RQIHAQTIV 379
Query: 467 EPSIEHYLC---LVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELG 521
+ L LVD+ + G+F+ A + I A W ++SA ++ E G
Sbjct: 380 TTADSEILVGNSLVDMYAKCGKFEEA-EMIFTNLTHRSAVPWTAMISAYVQKGFYEEG 436
Score = 101 bits (252), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 116/228 (50%), Gaps = 38/228 (16%)
Query: 257 LLKSGYNNEDPLDNLLVSMYTKCGDLELA------------------------------- 285
++K+G++ + N V + K G+L A
Sbjct: 43 IVKTGFDPDTSRSNFRVGNFLKNGELSQARQLFEKMPHKNTVSTNMMISGYVKSGNLGEA 102
Query: 286 RRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSAC--A 343
R++FD ++E++ WT +IGGY+QL EA LF ++ + P+ T T LS C
Sbjct: 103 RKLFDGMVERTAVTWTILIGGYSQLNQFKEAFELFVQMQRCGTEPDYVTFVTLLSGCNGH 162
Query: 344 ELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSA 403
E+G ++ +++ I+ G +S V +L+ + K R++ A ++F+ +P+ D ++A
Sbjct: 163 EMG--NQITQVQTQIIKLGYDSRLIVGNTLVDSYCKSNRLDLACQLFKEMPEIDSVSYNA 220
Query: 404 MINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVD 451
MI GY+ G+ ++A+NLF +MQ+ GLKP + ++L C++ G+ D
Sbjct: 221 MITGYSKDGLDEKAVNLFVEMQN-SGLKPTEFTFAAVL--CANIGLDD 265
Score = 52.0 bits (123), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 40/175 (22%), Positives = 73/175 (41%), Gaps = 33/175 (18%)
Query: 354 IEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDL--------------- 398
I+ IV G + + + F K G +++A+++FE++P K+
Sbjct: 39 IDARIVKTGFDPDTSRSNFRVGNFLKNGELSQARQLFEKMPHKNTVSTNMMISGYVKSGN 98
Query: 399 ----------------AVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILS 442
W+ +I GY+ +A LF +MQ G +PD V + ++LS
Sbjct: 99 LGEARKLFDGMVERTAVTWTILIGGYSQLNQFKEAFELFVQMQRC-GTEPDYVTFVTLLS 157
Query: 443 ACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMP 497
C+ M + ++ ++ G + + LVD ++ R DLA + EMP
Sbjct: 158 GCNGHEM-GNQITQVQTQIIKLGYDSRLIVGNTLVDSYCKSNRLDLACQLFKEMP 211
>gi|356495733|ref|XP_003516728.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20770-like [Glycine max]
Length = 770
Score = 331 bits (849), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 182/574 (31%), Positives = 308/574 (53%), Gaps = 45/574 (7%)
Query: 12 EETLSTYSSMLQTGVHGNSFTFPLVLKACAN----------INSIWDGKRVHSHVLKVGF 61
+E + ML+ G+ +S + +L CA I++ GK++H+ +K+GF
Sbjct: 221 KEAAELFRLMLRKGIRVDSVSLSSMLGVCAKGERDVGPCHGISTNAQGKQMHTLSVKLGF 280
Query: 62 QQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVL 121
++D + L+DMY+K D S+ KV + + SVVSWN +I+ + C +++A L
Sbjct: 281 ERDLHLCNSLLDMYAKIGDMDSAEKVF--VNLNRHSVVSWNIMIAGYGNRCNSEKAAEYL 338
Query: 122 KEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKV 181
+ M G E T++++++ C K G V
Sbjct: 339 QRMQSDGYEPDDVTYINMLTAC--------------------------------VKSGDV 366
Query: 182 NEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGC 241
R IFD + S+ SW I+ GY + EA L +M+ PD ++ C
Sbjct: 367 RTGRQIFDCMPCPSLTSWNAILSGYNQNADHREAVELFRKMQFQCQHPDRTTLAVILSSC 426
Query: 242 AQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWT 301
A++G L +H+ K G+ ++ + + L+++Y+KCG +EL++ VF + E V W
Sbjct: 427 AELGFLEAGKEVHAASQKFGFYDDVYVASSLINVYSKCGKMELSKHVFSKLPELDVVCWN 486
Query: 302 SMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLN 361
SM+ G++ +A++ FK++ + P+E + AT +S+CA+L SL +G++ IV +
Sbjct: 487 SMLAGFSINSLGQDALSFFKKMRQLGFFPSEFSFATVVSSCAKLSSLFQGQQFHAQIVKD 546
Query: 362 GLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLF 421
G + V +SLI M+ KCG +N A+ F+ +P ++ W+ MI+GYA +G G AL L+
Sbjct: 547 GFLDDIFVGSSLIEMYCKCGDVNGARCFFDVMPGRNTVTWNEMIHGYAQNGDGHNALCLY 606
Query: 422 YKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLG 481
M G KPD + Y ++L+ACSHS +VD+GL F +M +G+ P + HY C++D L
Sbjct: 607 NDMIS-SGEKPDDITYVAVLTACSHSALVDEGLEIFNAMLQKYGVVPKVAHYTCIIDCLS 665
Query: 482 RAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYIL 541
RAGRF+ + MP + A VW +LS+C H N+ L + AA+ L L+P ++ +Y+L
Sbjct: 666 RAGRFNEVEVILDAMPCKDDAVVWEVVLSSCRIHANLSLAKRAAEELYRLDPQNSASYVL 725
Query: 542 MANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQ 575
+AN+++S G W +A R LM ++ K+PG+S+
Sbjct: 726 LANMYSSLGKWDDAHVVRDLMSHNQVRKDPGYSR 759
Score = 205 bits (521), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 130/471 (27%), Positives = 225/471 (47%), Gaps = 64/471 (13%)
Query: 9 GSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQ 68
G + L TY S++ GV + TF V AC ++ G+R H V+KVG + + +V
Sbjct: 117 GYERQALDTYDSVMLDGVIPSHITFATVFSACGSLLDADCGRRTHGVVIKVGLESNIYVV 176
Query: 69 TGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLG 128
L+ MY+KC + +V ++P + V++ +++ ++ EA + + M G
Sbjct: 177 NALLCMYAKCGLNADALRVFRDIPEP--NEVTFTTMMGGLAQTNQIKEAAELFRLMLRKG 234
Query: 129 LELSASTFVSVVSGC--------------SFRQGISMHCCVYKLGLLNNEIPLANSVMSM 174
+ + + + S++ C + QG MH KLG ++ L NS++ M
Sbjct: 235 IRVDSVSLSSMLGVCAKGERDVGPCHGISTNAQGKQMHTLSVKLGF-ERDLHLCNSLLDM 293
Query: 175 YAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVF 234
YAK G ++ A +F + S+VSW +I GY N N +A +M+ PD V +
Sbjct: 294 YAKIGDMDSAEKVFVNLNRHSVVSWNIMIAGYGNRCNSEKAAEYLQRMQSDGYEPDDVTY 353
Query: 235 LNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLE 294
+N++ C K GD+ R++FD +
Sbjct: 354 INMLTAC-----------------------------------VKSGDVRTGRQIFDCMPC 378
Query: 295 KSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEI 354
S+ W +++ GY Q EAV LF+++ P+ TLA LS+CAELG L GKE+
Sbjct: 379 PSLTSWNAILSGYNQNADHREAVELFRKMQFQCQHPDRTTLAVILSSCAELGFLEAGKEV 438
Query: 355 EEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMG 414
G + V +SLI+++SKCG++ +K VF ++P+ D+ W++M+ G++I+ +G
Sbjct: 439 HAASQKFGFYDDVYVASSLINVYSKCGKMELSKHVFSKLPELDVVCWNSMLAGFSINSLG 498
Query: 415 DQALNLFYKMQHVEGLKPDAVVYTSILSACS-----------HSGMVDDGL 454
AL+ F KM+ + G P + +++S+C+ H+ +V DG
Sbjct: 499 QDALSFFKKMRQL-GFFPSEFSFATVVSSCAKLSSLFQGQQFHAQIVKDGF 548
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 130/524 (24%), Positives = 220/524 (41%), Gaps = 82/524 (15%)
Query: 30 SFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLD 89
S +++ C + GK VH+ + ++ D F+ I++YSKC S+ V D
Sbjct: 6 SLNLANLVQHCITNKAHLSGKVVHARLFRLALFSDTFLSNHFIELYSKCDHIASACHVFD 65
Query: 90 EMP-----------------------VRL------RSVVSWNSIISAHSRACLNDEAILV 120
+P RL R+ VS N++IS R +A+
Sbjct: 66 NIPHKNIFSWNAILAAYCKARNLQYACRLFLQMPQRNTVSLNTLISTMVRCGYERQALDT 125
Query: 121 LKEMWVLGLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
+ + G+ S TF +V S C G H V K+GL +N I + N+++ MYA
Sbjct: 126 YDSVMLDGVIPSHITFATVFSACGSLLDADCGRRTHGVVIKVGLESN-IYVVNALLCMYA 184
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K G +A +F +I E + V++TT++GG + EA L M R + D V +
Sbjct: 185 KCGLNADALRVFRDIPEPNEVTFTTMMGGLAQTNQIKEAAELFRLMLRKGIRVDSVSLSS 244
Query: 237 LILGCAQ----------VGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELAR 286
++ CA+ + MH+L +K G+ + L N L+ MY K GD++ A
Sbjct: 245 MLGVCAKGERDVGPCHGISTNAQGKQMHTLSVKLGFERDLHLCNSLLDMYAKIGDMDSAE 304
Query: 287 RVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELG 346
+VF + SV W MI GY +A +R+ P++ T L+AC + G
Sbjct: 305 KVFVNLNRHSVVSWNIMIAGYGNRCNSEKAAEYLQRMQSDGYEPDDVTYINMLTACVKSG 364
Query: 347 SLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMIN 406
+ G++I F+ +P L W+A+++
Sbjct: 365 DVRTGRQI-----------------------------------FDCMPCPSLTSWNAILS 389
Query: 407 GYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGI 466
GY + +A+ LF KMQ + PD ILS+C+ G ++ G + Q FG
Sbjct: 390 GYNQNADHREAVELFRKMQ-FQCQHPDRTTLAVILSSCAELGFLEAGKEVHAASQ-KFGF 447
Query: 467 EPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLS 510
+ L+++ + G+ +L+ ++P E+ W +L+
Sbjct: 448 YDDVYVASSLINVYSKCGKMELSKHVFSKLP-ELDVVCWNSMLA 490
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 103/419 (24%), Positives = 184/419 (43%), Gaps = 51/419 (12%)
Query: 148 GISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYV 207
G +H +++L L ++ L+N + +Y+K + A +FD I +I SW I+ Y
Sbjct: 25 GKVVHARLFRLALFSDTF-LSNHFIELYSKCDHIASACHVFDNIPHKNIFSWNAILAAYC 83
Query: 208 NVGNVNEAFGLCNQMRRMS-------------------------------VTPDLVVFLN 236
N+ A L QM + + V P + F
Sbjct: 84 KARNLQYACRLFLQMPQRNTVSLNTLISTMVRCGYERQALDTYDSVMLDGVIPSHITFAT 143
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
+ C + + H +++K G + + N L+ MY KCG A RVF + E +
Sbjct: 144 VFSACGSLLDADCGRRTHGVVIKVGLESNIYVVNALLCMYAKCGLNADALRVFRDIPEPN 203
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAE----------LG 346
+T+M+GG AQ EA LF+ +L+ +R + +L++ L CA+ +
Sbjct: 204 EVTFTTMMGGLAQTNQIKEAAELFRLMLRKGIRVDSVSLSSMLGVCAKGERDVGPCHGIS 263
Query: 347 SLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMIN 406
+ ++GK++ V G E + + SL+ M++K G ++ A++VF + + W+ MI
Sbjct: 264 TNAQGKQMHTLSVKLGFERDLHLCNSLLDMYAKIGDMDSAEKVFVNLNRHSVVSWNIMIA 323
Query: 407 GYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGI 466
GY ++A +MQ +G +PD V Y ++L+AC SG V G F M
Sbjct: 324 GYGNRCNSEKAAEYLQRMQS-DGYEPDDVTYINMLTACVKSGDVRTGRQIFDCMPC---- 378
Query: 467 EPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQ---AQVWAPLLSACMKHHNVELGE 522
PS+ + ++ + A++ +M + Q A +LS+C + +E G+
Sbjct: 379 -PSLTSWNAILSGYNQNADHREAVELFRKMQFQCQHPDRTTLAVILSSCAELGFLEAGK 436
>gi|334185633|ref|NP_189226.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546761|sp|Q9LU94.2|PP255_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g25970
gi|332643575|gb|AEE77096.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 701
Score = 331 bits (849), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 196/622 (31%), Positives = 336/622 (54%), Gaps = 29/622 (4%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI T+ G E+ ++ M ++G + ++F +LK A++ G++VH V+K G
Sbjct: 72 MISGYTSCGKLEDAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGG 131
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
++ + +V + L+DMY+KC + + E + + VSWN++I+ + + D +
Sbjct: 132 YECNVYVGSSLVDMYAKCERVEDAFEAFKE--ISEPNSVSWNALIAGFVQ--VRD----I 183
Query: 121 LKEMWVLGL-------ELSASTFVSVVS------GCSFRQGISMHCCVYKLGLLNNEIPL 167
W+LGL + A TF +++ C+ + + H V KLGL +EI +
Sbjct: 184 KTAFWLLGLMEMKAAVTMDAGTFAPLLTLLDDPMFCNLLKQV--HAKVLKLGL-QHEITI 240
Query: 168 ANSVMSMYAKFGKVNEARSIFDEIG-ETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMS 226
N+++S YA G V++A+ +FD +G ++SW ++I G+ AF L QM+R
Sbjct: 241 CNAMISSYADCGSVSDAKRVFDGLGGSKDLISWNSMIAGFSKHELKESAFELFIQMQRHW 300
Query: 227 VTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTK--CGDLEL 284
V D+ + L+ C+ + S+H +++K G N L+SMY + G +E
Sbjct: 301 VETDIYTYTGLLSACSGEEHQIFGKSLHGMVIKKGLEQVTSATNALISMYIQFPTGTMED 360
Query: 285 ARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAE 344
A +F+++ K + W S+I G+AQ G +AV F L + ++ ++ + L +C++
Sbjct: 361 ALSLFESLKSKDLISWNSIITGFAQKGLSEDAVKFFSYLRSSEIKVDDYAFSALLRSCSD 420
Query: 345 LGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAV-WSA 403
L +L G++I +G SN V +SLI M+SKCG I A++ F+++ K V W+A
Sbjct: 421 LATLQLGQQIHALATKSGFVSNEFVISSLIVMYSKCGIIESARKCFQQISSKHSTVAWNA 480
Query: 404 MINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSN 463
MI GYA HG+G +L+LF +M + + +K D V +T+IL+ACSH+G++ +GL M+
Sbjct: 481 MILGYAQHGLGQVSLDLFSQMCN-QNVKLDHVTFTAILTACSHTGLIQEGLELLNLMEPV 539
Query: 464 FGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEY 523
+ I+P +EHY VDLLGRAG + A + I MP+ V L C +E+
Sbjct: 540 YKIQPRMEHYAAAVDLLGRAGLVNKAKELIESMPLNPDPMVLKTFLGVCRACGEIEMATQ 599
Query: 524 AAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQ 583
A +LL + P Y+ ++++++ W+E A+ + +M +R + K PGWS +EI V+
Sbjct: 600 VANHLLEIEPEDHFTYVSLSHMYSDLKKWEEKASVKKMMKERGVKKVPGWSWIEIRNQVK 659
Query: 584 VFVAGDRSHHLSVDIRKTLKEL 605
F A DRS+ L DI +K+L
Sbjct: 660 AFNAEDRSNPLCQDIYMMIKDL 681
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 117/402 (29%), Positives = 196/402 (48%), Gaps = 12/402 (2%)
Query: 52 VHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRA 111
H + +K G D +V ++D Y K + + DEMP R VSWN++IS ++
Sbjct: 22 THCYAIKCGSISDIYVSNRILDSYIKFGFLGYANMLFDEMPK--RDSVSWNTMISGYTSC 79
Query: 112 CLNDEAILVLKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPL 167
++A + M G ++ +F ++ G + F G +H V K G N + +
Sbjct: 80 GKLEDAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECN-VYV 138
Query: 168 ANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMR-RMS 226
+S++ MYAK +V +A F EI E + VSW +I G+V V ++ AF L M + +
Sbjct: 139 GSSLVDMYAKCERVEDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAA 198
Query: 227 VTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELAR 286
VT D F L+ L +H+ +LK G +E + N ++S Y CG + A+
Sbjct: 199 VTMDAGTFAPLLTLLDDPMFCNLLKQVHAKVLKLGLQHEITICNAMISSYADCGSVSDAK 258
Query: 287 RVFDAV-LEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAEL 345
RVFD + K + W SMI G+++ A LF ++ + V + T LSAC+
Sbjct: 259 RVFDGLGGSKDLISWNSMIAGFSKHELKESAFELFIQMQRHWVETDIYTYTGLLSACSGE 318
Query: 346 GSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSK--CGRINKAKEVFERVPDKDLAVWSA 403
GK + ++ GLE +LI M+ + G + A +FE + KDL W++
Sbjct: 319 EHQIFGKSLHGMVIKKGLEQVTSATNALISMYIQFPTGTMEDALSLFESLKSKDLISWNS 378
Query: 404 MINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACS 445
+I G+A G+ + A+ F ++ E +K D ++++L +CS
Sbjct: 379 IITGFAQKGLSEDAVKFFSYLRSSE-IKVDDYAFSALLRSCS 419
Score = 40.8 bits (94), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 41/184 (22%), Positives = 79/184 (42%), Gaps = 8/184 (4%)
Query: 357 YIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQ 416
Y + G S+ V ++ + K G + A +F+ +P +D W+ MI+GY G +
Sbjct: 25 YAIKCGSISDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGKLED 84
Query: 417 ALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCL 476
A LF M+ G D ++ +L + D G + G E ++ L
Sbjct: 85 AWCLFTCMKR-SGSDVDGYSFSRLLKGIASVKRFDLGEQ-VHGLVIKGGYECNVYVGSSL 142
Query: 477 VDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVE-----LGEYAAKNLLTL 531
VD+ + R + A + E+ E + W L++ ++ +++ LG K +T+
Sbjct: 143 VDMYAKCERVEDAFEAFKEIS-EPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAAVTM 201
Query: 532 NPGS 535
+ G+
Sbjct: 202 DAGT 205
>gi|147853412|emb|CAN82303.1| hypothetical protein VITISV_013933 [Vitis vinifera]
Length = 549
Score = 331 bits (848), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 178/551 (32%), Positives = 297/551 (53%), Gaps = 10/551 (1%)
Query: 74 MYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSA 133
MYSKC+ + + + P +V ++N+IIS +E ++M G+
Sbjct: 1 MYSKCNQMNFALSIFSD-PTHEINVFAFNAIISGFITNGFPEEGFEFYQKMRNEGVMPDK 59
Query: 134 STFVSVVSGC-SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIG 192
TF + C + +H ++K GL ++ + +++++ Y KFG + A+ F+E+
Sbjct: 60 FTFPCAIKACLDVLEIKKIHGLLFKFGL-ELDVFIGSALVNCYLKFGLMEHAQVAFEELP 118
Query: 193 ETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALS 252
+V W ++ GY +G +M SV P ++ A +G+L
Sbjct: 119 IRDVVLWNAMVNGYAQIGQFEMVLETFRRMNDESVVPSRFTVTGILSVFAVMGDLNNGRI 178
Query: 253 MHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGY 312
+H +K GY++ + N L+ MY KC +E A +F+ + EK +F W S+ + Q G
Sbjct: 179 IHGFAMKMGYDSGVAVSNSLIDMYGKCKCIEDALEIFEMMREKDIFSWNSIXSVHEQCGD 238
Query: 313 PSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQ---- 368
+ L R+L ++P+ T+ T L AC+ L +L G+EI Y++++GL + +
Sbjct: 239 HDGTLRLLDRMLGAGIQPDLVTVTTVLPACSHLAALMHGREIHGYMIVSGLGKDGKDIDD 298
Query: 369 --VQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQH 426
++ ++I M++KCG + A VFER+ +KD+A W+ MI GY +HG G++AL +F +M
Sbjct: 299 VLLKNAVIDMYAKCGSMRDAHLVFERMXNKDVASWNIMIMGYGMHGYGNEALEMFSRMCE 358
Query: 427 VEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRF 486
V+ LKPD V + +LSACSH+G V G +F M+S + + P+IEHY C++D+LGRAG+
Sbjct: 359 VQ-LKPDEVTFVGVLSACSHAGFVSQGRNFLAQMKSKYDVAPTIEHYTCVIDMLGRAGQL 417
Query: 487 DLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLF 546
D A + MP+E VW LL+AC H + L E AA+ + L P G+Y+LM+N++
Sbjct: 418 DEAYELALTMPIEANPVVWRALLAACRLHKHAVLAEVAAQRVFELEPEHCGSYVLMSNVY 477
Query: 547 TSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKELH 606
+ G ++E R M + + K PG S +E+ V VFV+ DR+H + I L L
Sbjct: 478 GAVGRYEEVLEVRHTMRQQNVRKTPGCSWIELKNGVHVFVSADRAHPEAYSIYAGLNSLT 537
Query: 607 IKLLEAGYIAE 617
+L E GY+ +
Sbjct: 538 ARLCEHGYVPD 548
Score = 175 bits (444), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 115/428 (26%), Positives = 207/428 (48%), Gaps = 28/428 (6%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+I NG EE Y M GV + FTFP +KAC ++ I K++H + K G
Sbjct: 30 IISGFITNGFPEEGFEFYQKMRNEGVMPDKFTFPCAIKACLDVLEI---KKIHGLLFKFG 86
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+ D F+ + L++ Y K ++ +E+P+ R VV WN++++ +++ + +
Sbjct: 87 LELDVFIGSALVNCYLKFGLMEHAQVAFEELPI--RDVVLWNAMVNGYAQIGQFEMVLET 144
Query: 121 LKEM---WVLGLELSASTFVSV--VSGCSFRQGISMHCCVYKLGLLNNEIPLANSVMSMY 175
+ M V+ + + +SV V G G +H K+G ++ + ++NS++ MY
Sbjct: 145 FRRMNDESVVPSRFTVTGILSVFAVMG-DLNNGRIIHGFAMKMG-YDSGVAVSNSLIDMY 202
Query: 176 AKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFL 235
K + +A IF+ + E I SW +I + G+ + L ++M + PDLV
Sbjct: 203 GKCKCIEDALEIFEMMREKDIFSWNSIXSVHEQCGDHDGTLRLLDRMLGAGIQPDLVTVT 262
Query: 236 NLILGCAQVGNLFLALSMHSLLLKSGYNNEDP------LDNLLVSMYTKCGDLELARRVF 289
++ C+ + L +H ++ SG + L N ++ MY KCG + A VF
Sbjct: 263 TVLPACSHLAALMHGREIHGYMIVSGLGKDGKDIDDVLLKNAVIDMYAKCGSMRDAHLVF 322
Query: 290 DAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLS 349
+ + K V W MI GY GY +EA+ +F R+ + ++P+E T LSAC+ G +S
Sbjct: 323 ERMXNKDVASWNIMIMGYGMHGYGNEALEMFSRMCEVQLKPDEVTFVGVLSACSHAGFVS 382
Query: 350 KGKEI-----EEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVP-DKDLAVWSA 403
+G+ +Y V +E T +I M + G++++A E+ +P + + VW A
Sbjct: 383 QGRNFLAQMKSKYDVAPTIEH----YTCVIDMLGRAGQLDEAYELALTMPIEANPVVWRA 438
Query: 404 MINGYAIH 411
++ +H
Sbjct: 439 LLAACRLH 446
>gi|224090525|ref|XP_002309013.1| predicted protein [Populus trichocarpa]
gi|222854989|gb|EEE92536.1| predicted protein [Populus trichocarpa]
Length = 583
Score = 331 bits (848), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 189/581 (32%), Positives = 319/581 (54%), Gaps = 12/581 (2%)
Query: 36 VLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRL 95
++ C+ ++ G +H+ +K + D V ++++Y+KC +R+V DEM R
Sbjct: 9 LIHQCSKTKALRQGLPLHAIAIKTATRSDVIVSNHILNLYAKCRKLREARQVFDEMSER- 67
Query: 96 RSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCS----FRQGISM 151
++VSW+++IS + + E I L L + + + SV+S C+ QG +
Sbjct: 68 -NLVSWSAMISGYEQI---GEPISALGLFSKLNIVPNEYVYASVISACASLKGLVQGKQI 123
Query: 152 HCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGN 211
H K GL ++ ++N++++MY K GK ++A ++E E + V++ +I G+V
Sbjct: 124 HGQALKFGL-DSVSFVSNALITMYMKCGKCSDALLAYNEALELNPVAYNALITGFVENQQ 182
Query: 212 VNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNL 271
++ F + M + PD F+ L+ C +L +H +K N+ + NL
Sbjct: 183 PDKGFEVLRMMYQDGFFPDRFTFVGLLGTCNSRDDLKRGELLHCQTIKLKLNSTAFIGNL 242
Query: 272 LVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLL-KTSVRP 330
+++MY+K LE A + F ++ EK + W + I + +A+ FK +L + VRP
Sbjct: 243 IITMYSKLNLLEEAEKAFRSIEEKDLISWNTFISSCSHCNDHEKALEAFKEMLNECRVRP 302
Query: 331 NEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVF 390
+E T A+ L+AC+ L S+ GK+I +++ L + +LI+M++KCG I KA +F
Sbjct: 303 DEFTFASALAACSGLASMCNGKQIHGHLIRTRLYQDVGAGNALINMYAKCGCIAKAYYIF 362
Query: 391 ERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMV 450
++ ++L W+ MI G+ HG G +A LF KM+ + G+KPD+V + +L+A +H+G+V
Sbjct: 363 SKMEHQNLVSWNTMIAGFGNHGFGGKAFELFAKMKTM-GVKPDSVTFVGLLTASNHAGLV 421
Query: 451 DDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLS 510
D+GL +F SM+ +GI P IEH+ CL+DLLGRAGR + A + + + P V LLS
Sbjct: 422 DEGLVYFNSMEETYGISPEIEHFSCLIDLLGRAGRLNEAKEYMKKFPFGHDTVVLGSLLS 481
Query: 511 ACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKE 570
AC H +V+ G+ A+ LL L P +T Y+L++NL+ S MW A A L+ L KE
Sbjct: 482 ACRLHGDVDTGKCFARQLLKLQPATTSPYVLLSNLYASDEMWDGVAEAWKLLKGSGLKKE 541
Query: 571 PGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKELHIKLLE 611
PG S +E++G+ + F D SH +I LK L +E
Sbjct: 542 PGHSLIEVNGTFEKFTVVDFSHSRIEEIMDMLKILRWAAIE 582
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 104/400 (26%), Positives = 188/400 (47%), Gaps = 28/400 (7%)
Query: 29 NSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMY---SKCSD-FVSS 84
N + + V+ ACA++ + GK++H LK G +FV LI MY KCSD ++
Sbjct: 100 NEYVYASVISACASLKGLVQGKQIHGQALKFGLDSVSFVSNALITMYMKCGKCSDALLAY 159
Query: 85 RKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCS 144
+ L+ P V++N++I+ D+ VL+ M+ G TFV ++ C+
Sbjct: 160 NEALELNP------VAYNALITGFVENQQPDKGFEVLRMMYQDGFFPDRFTFVGLLGTCN 213
Query: 145 FR----QGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWT 200
R +G +HC KL LN+ + N +++MY+K + EA F I E ++SW
Sbjct: 214 SRDDLKRGELLHCQTIKLK-LNSTAFIGNLIITMYSKLNLLEEAEKAFRSIEEKDLISWN 272
Query: 201 TIIGGYVNVGNVNEAFGLCNQM-RRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLK 259
T I + + +A +M V PD F + + C+ + ++ +H L++
Sbjct: 273 TFISSCSHCNDHEKALEAFKEMLNECRVRPDEFTFASALAACSGLASMCNGKQIHGHLIR 332
Query: 260 SGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNL 319
+ + N L++MY KCG + A +F + +++ W +MI G+ G+ +A L
Sbjct: 333 TRLYQDVGAGNALINMYAKCGCIAKAYYIFSKMEHQNLVSWNTMIAGFGNHGFGGKAFEL 392
Query: 320 FKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQ------TSL 373
F ++ V+P+ T L+A G + +G + N +E + + L
Sbjct: 393 FAKMKTMGVKPDSVTFVGLLTASNHAGLVDEG-----LVYFNSMEETYGISPEIEHFSCL 447
Query: 374 IHMFSKCGRINKAKEVFERVP-DKDLAVWSAMINGYAIHG 412
I + + GR+N+AKE ++ P D V ++++ +HG
Sbjct: 448 IDLLGRAGRLNEAKEYMKKFPFGHDTVVLGSLLSACRLHG 487
Score = 121 bits (304), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 122/219 (55%), Gaps = 6/219 (2%)
Query: 227 VTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELAR 286
+ P+LV +LI C++ L L +H++ +K+ ++ + N ++++Y KC L AR
Sbjct: 1 MVPELVG--SLIHQCSKTKALRQGLPLHAIAIKTATRSDVIVSNHILNLYAKCRKLREAR 58
Query: 287 RVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELG 346
+VFD + E+++ W++MI GY Q+G P A+ LF +L ++ PNE A+ +SACA L
Sbjct: 59 QVFDEMSERNLVSWSAMISGYEQIGEPISALGLFSKL---NIVPNEYVYASVISACASLK 115
Query: 347 SLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMIN 406
L +GK+I + GL+S V +LI M+ KCG+ + A + + + ++A+I
Sbjct: 116 GLVQGKQIHGQALKFGLDSVSFVSNALITMYMKCGKCSDALLAYNEALELNPVAYNALIT 175
Query: 407 GYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACS 445
G+ + D+ + +M + +G PD + +L C+
Sbjct: 176 GFVENQQPDKGFEVL-RMMYQDGFFPDRFTFVGLLGTCN 213
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 114/230 (49%), Gaps = 8/230 (3%)
Query: 21 MLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSD 80
M Q G + FTF +L C + + + G+ +H +K+ AF+ +I MYSK +
Sbjct: 193 MYQDGFFPDRFTFVGLLGTCNSRDDLKRGELLHCQTIKLKLNSTAFIGNLIITMYSKLNL 252
Query: 81 FVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMW-VLGLELSASTFVSV 139
+ K + + ++SWN+ IS+ S +++A+ KEM + TF S
Sbjct: 253 LEEAEKAFRS--IEEKDLISWNTFISSCSHCNDHEKALEAFKEMLNECRVRPDEFTFASA 310
Query: 140 VSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETS 195
++ C S G +H + + L ++ N++++MYAK G + +A IF ++ +
Sbjct: 311 LAACSGLASMCNGKQIHGHLIRTRLY-QDVGAGNALINMYAKCGCIAKAYYIFSKMEHQN 369
Query: 196 IVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVG 245
+VSW T+I G+ N G +AF L +M+ M V PD V F+ L+ G
Sbjct: 370 LVSWNTMIAGFGNHGFGGKAFELFAKMKTMGVKPDSVTFVGLLTASNHAG 419
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 96/191 (50%), Gaps = 9/191 (4%)
Query: 1 MIRNSTNNGSFEETLSTYSSML-QTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKV 59
I + ++ E+ L + ML + V + FTF L AC+ + S+ +GK++H H+++
Sbjct: 274 FISSCSHCNDHEKALEAFKEMLNECRVRPDEFTFASALAACSGLASMCNGKQIHGHLIRT 333
Query: 60 GFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAIL 119
QD LI+MY+KC + + +M +++VSWN++I+ +A
Sbjct: 334 RLYQDVGAGNALINMYAKCGCIAKAYYIFSKM--EHQNLVSWNTMIAGFGNHGFGGKAFE 391
Query: 120 VLKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGL-----LNNEIPLANSVMSM 174
+ +M +G++ + TFV +++ S G+ VY + ++ EI + ++ +
Sbjct: 392 LFAKMKTMGVKPDSVTFVGLLTA-SNHAGLVDEGLVYFNSMEETYGISPEIEHFSCLIDL 450
Query: 175 YAKFGKVNEAR 185
+ G++NEA+
Sbjct: 451 LGRAGRLNEAK 461
>gi|413923618|gb|AFW63550.1| hypothetical protein ZEAMMB73_399779 [Zea mays]
Length = 1118
Score = 331 bits (848), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 184/562 (32%), Positives = 310/562 (55%), Gaps = 16/562 (2%)
Query: 26 VHGNSFTFPLVLKACANINSIWDGKRVHSHVLK-VGFQQDAFVQTGLIDMYSKCSDF--- 81
V + FT L+L+AC + S+ G+ VH+ ++ +DAFV T ++ MYS+C D
Sbjct: 562 VRRDGFTLSLLLRACTALPSLTHGRAVHAAAVRSCTASEDAFVATAIVQMYSRCGDMAGA 621
Query: 82 VSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAI-LVLKEMWVLGLELSASTFVSVV 140
+++ +L++ + LR+ S+++ + + + +EA+ + + G+ ++ T VSV+
Sbjct: 622 INAYGMLEKPDIVLRT-----SVVTGYEQNGMAEEALEFFARNVVGQGVLVTPVTLVSVM 676
Query: 141 SGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSI 196
S + R+G + H V + L+ ++ L N+V+ Y K G + + +F+ + + +
Sbjct: 677 SAAAQLGHVRKGQACHAYVVR-NSLSYDLALVNAVLGFYVKIGDLQASMRLFEGMTDRDV 735
Query: 197 VSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSL 256
++W+ +I GYV G+ + F + +M + V P+ V ++++ CA V + +H +
Sbjct: 736 ITWSCMIKGYVQHGDAHTGFRMYREMVKARVQPNSVTLVSVLQACALVVDAEEGKRLHRV 795
Query: 257 LLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEA 316
+ G E + LV MY KC E A R+F + +K V W ++IGG Q P E+
Sbjct: 796 AVSIGCELELGVATALVDMYMKCSCHEEAMRLFHRMPKKDVVAWAAVIGGLTQNELPGES 855
Query: 317 VNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHM 376
++ FK +L P+ T+ L+AC+E G + Y+V NG +N V +L+ +
Sbjct: 856 LHSFKCMLLNDHVPDAVTMVKVLAACSEFGGNRLAICLHGYLVRNGFNNNAFVAAALLDL 915
Query: 377 FSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVV 436
+SKCG ++ A VFE +KD+ VW +MI GY HG+G +A+ L+ +M ++P+ V
Sbjct: 916 YSKCGDLDSAVRVFEGTTEKDIVVWGSMIAGYGAHGLGQEAVALYQRMI-ASSIQPNNVT 974
Query: 437 YTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEM 496
+ S+LSACSHSG+V +G+ F SM FG+ P+ EH +VDLLGRAG A++ I +M
Sbjct: 975 FLSVLSACSHSGLVQEGIQIFDSMTQVFGVVPNAEHQSAMVDLLGRAGELQEAIRVIRDM 1034
Query: 497 PVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAA 556
A W LL+AC KH+N ++ E AAKNLL L+P G Y L+ NL+ W+
Sbjct: 1035 DGRAVAHTWCALLAACRKHNNTKMSEVAAKNLLKLDPDHVGYYNLLTNLYAFDEKWENVK 1094
Query: 557 TARGLMDDRRLTKEPGWSQVEI 578
R ++ R L K G+S VE+
Sbjct: 1095 DTRDMVKGRDLRKVAGYSSVEV 1116
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 75/249 (30%), Positives = 124/249 (49%), Gaps = 7/249 (2%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI+ +G Y M++ V NS T VL+ACA + +GKR+H + +G
Sbjct: 741 MIKGYVQHGDAHTGFRMYREMVKARVQPNSVTLVSVLQACALVVDAEEGKRLHRVAVSIG 800
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+ + V T L+DMY KCS + ++ MP + VV+W ++I ++ L E++
Sbjct: 801 CELELGVATALVDMYMKCSCHEEAMRLFHRMPK--KDVVAWAAVIGGLTQNELPGESLHS 858
Query: 121 LKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
K M + A T V V++ CS R I +H + + G NN +A +++ +Y+
Sbjct: 859 FKCMLLNDHVPDAVTMVKVLAACSEFGGNRLAICLHGYLVRNGFNNNAF-VAAALLDLYS 917
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K G ++ A +F+ E IV W ++I GY G EA L +M S+ P+ V FL+
Sbjct: 918 KCGDLDSAVRVFEGTTEKDIVVWGSMIAGYGAHGLGQEAVALYQRMIASSIQPNNVTFLS 977
Query: 237 LILGCAQVG 245
++ C+ G
Sbjct: 978 VLSACSHSG 986
>gi|297741017|emb|CBI31329.3| unnamed protein product [Vitis vinifera]
Length = 753
Score = 331 bits (848), Expect = 8e-88, Method: Compositional matrix adjust.
Identities = 185/590 (31%), Positives = 313/590 (53%), Gaps = 19/590 (3%)
Query: 36 VLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRL 95
+L +C ++ S+ +G+++H H++ +GF+Q + L+ YS + V + + + +
Sbjct: 106 LLSSCTDVKSLAEGRQLHGHIISLGFEQHPILVPKLVTFYSAFNLLVDAHVITEN--SNI 163
Query: 96 RSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCV 155
WN +IS++ R +A+ K+M G+ T+ SV+ C
Sbjct: 164 LHPFPWNLLISSYVRNGFCQKALSAYKQMVKKGIRPDNFTYPSVLKACGEE--------- 214
Query: 156 YKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFD----EIGETSIVSWTTIIGGYVNVGN 211
LG N+ S+YA G NEA +F E E +I+ W TI GGY+ GN
Sbjct: 215 LDLGFGKEVHESINA--SLYASMGMWNEAFELFGSMWAEDIELNIIIWNTIAGGYLRTGN 272
Query: 212 VNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNL 271
A L +QMR+ D V + + C+ +G+ L +HS ++S + D + N
Sbjct: 273 YKGALELLSQMRKCGSHLDSVALIIGLGACSHIGDAKLGKEIHSFAIRSCFGEVDTVKNA 332
Query: 272 LVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPN 331
L++MY++C DL+ A +F + KS+ W S+I G + EA L + +L + PN
Sbjct: 333 LITMYSRCKDLKHAYLLFQLMEAKSLITWNSIISGCCHMDRSEEASFLLREMLLFGIEPN 392
Query: 332 EATLATTLSACAELGSLSKGKEIEEYIVLN-GLESNRQVQTSLIHMFSKCGRINKAKEVF 390
T+A+ L CA + +L GKE Y+ + + + +L+ M+++ G++ +A+ VF
Sbjct: 393 YVTIASVLPLCARVANLQHGKEFHCYMTRREDFKDHLLLWNALVDMYARSGKVLEARRVF 452
Query: 391 ERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMV 450
+ + ++D +++MI GY + G G AL LF +M + + +KPD + ++LSACSHSG+V
Sbjct: 453 DMLGERDKMTYTSMIAGYGMQGEGQAALKLFEEMNNFQ-IKPDHITMIAVLSACSHSGLV 511
Query: 451 DDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLS 510
G F+ M+S +G+ P +EH+ C+ DL GRAG + A + I MP + +WA L+
Sbjct: 512 TQGQLLFEKMRSLYGLTPHLEHFACMTDLFGRAGLLNKAKEIIRNMPYKPTPAMWATLIG 571
Query: 511 ACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKE 570
AC H N E+GE+AA+ LL + P + G Y+L+AN++ +AG W + A R M D + K
Sbjct: 572 ACRIHRNTEIGEWAAEKLLEMKPENPGYYVLIANMYAAAGCWNKLAKVRIFMRDLGVRKA 631
Query: 571 PGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKELHIKLLEAGYIAEADI 620
PG + V++ F+ D S+ + +I L+ L + + EAGYI+ D
Sbjct: 632 PGCAWVDVGTGFSPFLVDDTSNANADEIYPLLEGLTMVMKEAGYISSEDF 681
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 110/418 (26%), Positives = 199/418 (47%), Gaps = 20/418 (4%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+I + NG ++ LS Y M++ G+ ++FT+P VLKAC + GK VH +
Sbjct: 172 LISSYVRNGFCQKALSAYKQMVKKGIRPDNFTYPSVLKACGEELDLGFGKEVHESI---- 227
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+ G M+++ + S D + L +++ WN+I + R A+ +
Sbjct: 228 -NASLYASMG---MWNEAFELFGSMWAED---IEL-NIIIWNTIAGGYLRTGNYKGALEL 279
Query: 121 LKEMWVLGLELSASTFVSVVSGCSF----RQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
L +M G L + + + CS + G +H + + N++++MY+
Sbjct: 280 LSQMRKCGSHLDSVALIIGLGACSHIGDAKLGKEIHSFAIR-SCFGEVDTVKNALITMYS 338
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
+ + A +F + S+++W +II G ++ EA L +M + P+ V +
Sbjct: 339 RCKDLKHAYLLFQLMEAKSLITWNSIISGCCHMDRSEEASFLLREMLLFGIEPNYVTIAS 398
Query: 237 LILGCAQVGNLFLALSMHSLLL-KSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEK 295
++ CA+V NL H + + + + L N LV MY + G + ARRVFD + E+
Sbjct: 399 VLPLCARVANLQHGKEFHCYMTRREDFKDHLLLWNALVDMYARSGKVLEARRVFDMLGER 458
Query: 296 SVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEI- 354
+TSMI GY G A+ LF+ + ++P+ T+ LSAC+ G +++G+ +
Sbjct: 459 DKMTYTSMIAGYGMQGEGQAALKLFEEMNNFQIKPDHITMIAVLSACSHSGLVTQGQLLF 518
Query: 355 EEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDL-AVWSAMINGYAIH 411
E+ L GL + + + +F + G +NKAKE+ +P K A+W+ +I IH
Sbjct: 519 EKMRSLYGLTPHLEHFACMTDLFGRAGLLNKAKEIIRNMPYKPTPAMWATLIGACRIH 576
>gi|296082238|emb|CBI21243.3| unnamed protein product [Vitis vinifera]
Length = 778
Score = 331 bits (848), Expect = 8e-88, Method: Compositional matrix adjust.
Identities = 187/586 (31%), Positives = 314/586 (53%), Gaps = 17/586 (2%)
Query: 36 VLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRL 95
++K C + ++ K +H+ +LK + T LI Y+ + +
Sbjct: 10 LIKQCVTLEAL---KSLHASILKSHLH--PHLCTSLIAQYASLGSISHAYALFST--SHS 62
Query: 96 RSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGC----SFRQGISM 151
+V WN II A S + ++ + M LG++ + TF ++ C F G
Sbjct: 63 SNVFLWNHIIRAFSNTPHSRNSLRLYSRMLQLGIQATNFTFPFLLKACGCLADFELGARA 122
Query: 152 HCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGN 211
H V G +++ +ANS+M+MY +FG + +R +F+ + E ++VSW++++G Y + G
Sbjct: 123 HAHVVVFGY-ESDVFVANSLMAMYGRFGCFDFSRQVFERMPERNVVSWSSMVGAYAHNGR 181
Query: 212 VNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNL 271
E L +M + P+ +N + A + A +++ +G +++ + N
Sbjct: 182 YEEGLLLFWRMLNEGIAPNRGSIVNAM---ACIHREHEADDFCRVVIDNGLDSDQSVQNA 238
Query: 272 LVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPN 331
+ MY +CG +++ARR F +L+K + WTSMI Y Q P A+ LFK++ + P+
Sbjct: 239 AMGMYARCGRIDVARRFFYGILDKDLVAWTSMIEAYVQADLPINALELFKQMKLLGIVPD 298
Query: 332 EATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFE 391
TL + + A + L S + + I + +++ + T++I ++ KCG + A++ F+
Sbjct: 299 SVTLLSLIHAVSNLASFQLARFVHGVITRSFFKNHIALDTAVIDLYVKCGNLEYARKCFD 358
Query: 392 RVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVD 451
R+ ++L WS MI+GY +HG G +AL LF +M+ +KPD + + +LSACSH G++
Sbjct: 359 RMSARNLISWSTMISGYGMHGHGREALCLFDQMK--ASIKPDHIAFVMVLSACSHGGLIA 416
Query: 452 DGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSA 511
+G FK+M +FG+ P EHY C+VDLLGRAGR A I MP+ A VW LL A
Sbjct: 417 EGWECFKAMNRDFGVTPRTEHYACMVDLLGRAGRLSEAQAFIERMPITPDAGVWGALLGA 476
Query: 512 CMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEP 571
C H N+E E AA++L L+ + G YIL++N++ S+G KEA R LM R + K
Sbjct: 477 CRIHSNLETAETAARHLFNLDAENPGRYILLSNIYASSGKRKEADDIRALMKSRGVRKTV 536
Query: 572 GWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKELHIKLLEAGYIAE 617
G + +EI V FVAGD S+ + I L++L ++ EAGY+ +
Sbjct: 537 GHTIIEIKNKVYTFVAGDTSNPQTDLIYSELRKLMDRIQEAGYVPD 582
Score = 230 bits (586), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 147/545 (26%), Positives = 271/545 (49%), Gaps = 27/545 (4%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+IR +N +L YS MLQ G+ +FTFP +LKAC + G R H+HV+ G
Sbjct: 71 IIRAFSNTPHSRNSLRLYSRMLQLGIQATNFTFPFLLKACGCLADFELGARAHAHVVVFG 130
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
++ D FV L+ MY + F SR+V + MP R+VVSW+S++ A++ +E +L+
Sbjct: 131 YESDVFVANSLMAMYGRFGCFDFSRQVFERMPE--RNVVSWSSMVGAYAHNGRYEEGLLL 188
Query: 121 LKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGK 180
M G+ + + V+ ++ C V L+++ + N+ M MYA+ G+
Sbjct: 189 FWRMLNEGIAPNRGSIVNAMACIHREHEADDFCRVVIDNGLDSDQSVQNAAMGMYARCGR 248
Query: 181 VNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILG 240
++ AR F I + +V+WT++I YV A L QM+ + + PD V L+LI
Sbjct: 249 IDVARRFFYGILDKDLVAWTSMIEAYVQADLPINALELFKQMKLLGIVPDSVTLLSLIHA 308
Query: 241 CAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLW 300
+ + + LA +H ++ +S + N LD ++ +Y KCG+LE AR+ FD + +++ W
Sbjct: 309 VSNLASFQLARFVHGVITRSFFKNHIALDTAVIDLYVKCGNLEYARKCFDRMSARNLISW 368
Query: 301 TSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVL 360
++MI GY G+ EA+ LF + +K S++P+ LSAC+ G +++G E + +
Sbjct: 369 STMISGYGMHGHGREALCLFDQ-MKASIKPDHIAFVMVLSACSHGGLIAEGWECFKAMNR 427
Query: 361 N-GLESNRQVQTSLIHMFSKCGRINKAKEVFERVP-DKDLAVWSAMINGYAIHGMGDQAL 418
+ G+ + ++ + + GR+++A+ ER+P D VW A++ IH + A
Sbjct: 428 DFGVTPRTEHYACMVDLLGRAGRLSEAQAFIERMPITPDAGVWGALLGACRIHSNLETAE 487
Query: 419 NLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVD 478
+ +++ P + S + A S D + +++ + G+ ++ H +++
Sbjct: 488 TAARHLFNLDAENPGRYILLSNIYASSGKRKEADDI---RALMKSRGVRKTVGH--TIIE 542
Query: 479 LLGRAGRF----------DLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNL 528
+ + F DL + ++ +Q + P LS +L YA +L
Sbjct: 543 IKNKVYTFVAGDTSNPQTDLIYSELRKLMDRIQEAGYVPDLS-------FKLSVYAIVSL 595
Query: 529 LTLNP 533
++ +P
Sbjct: 596 VSDDP 600
>gi|449526313|ref|XP_004170158.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 706
Score = 331 bits (848), Expect = 8e-88, Method: Compositional matrix adjust.
Identities = 190/617 (30%), Positives = 331/617 (53%), Gaps = 26/617 (4%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
++RN T G E TL Y M+ +H + T+P VL++C++ +++ G+ +H +++K+G
Sbjct: 96 ILRNLTRYGESERTLLVYQQMVAKSMHPDEETYPFVLRSCSSFSNVGFGRTIHGYLVKLG 155
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAIL- 119
F V T L +MY +C +F ++ ++ D+ V+ + W S ++ N E I
Sbjct: 156 FDLFDVVATALAEMYEECIEFENAHQLFDKRSVK---DLGWPSSLTTEGPQNDNGEGIFR 212
Query: 120 VLKEMWVLGLELSASTFVSV---VSGCSFRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
V M L + TF ++ ++G + Q + C+ + L+ ++ + +V+S+Y+
Sbjct: 213 VFGRMIAEQLVPDSFTFFNLLRFIAGLNSIQLAKIVHCIAIVSKLSGDLLVNTAVLSLYS 272
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K + +AR +FD++ E V W +I Y G E L M R + DL L
Sbjct: 273 KLRSLVDARKLFDKMPEKDRVVWNIMIAAYAREGKPTECLELFKSMARSGIRSDLFTALP 332
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
+I AQ+ + H+ +L++G +++ + N L+ MY +C L+ A ++F+ + +KS
Sbjct: 333 VISSIAQLKCVDWGKQTHAHILRNGSDSQVSVHNSLIDMYCECKILDSACKIFNWMTDKS 392
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEE 356
A++LF ++ ++ + + L A +G+L K +
Sbjct: 393 SL----------------TALSLFSKMKSDGIQADFVIMINILPAFVHIGALENVKYLHG 436
Query: 357 YIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFE--RVPDKDLAVWSAMINGYAIHGMG 414
Y + GL S + T+L+ ++KCG I A+ +FE ++ DKDL +W++MI+ +A HG
Sbjct: 437 YSMKLGLTSLPSLNTALLITYAKCGSIEMAQRLFEEEKIDDKDLIMWNSMISAHANHGDW 496
Query: 415 DQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYL 474
Q L+ +M+ KPD V + +L+AC +SG+V+ G FFK M ++G +PS EHY
Sbjct: 497 SQCFKLYNRMK-CSNSKPDQVTFLGLLTACVNSGLVEKGKEFFKEMTESYGCQPSQEHYA 555
Query: 475 CLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPG 534
C+V+LLGRAG A + + MP++ A+VW PLLSAC H +L E+AA+ L+ + P
Sbjct: 556 CMVNLLGRAGLISEAGELVKNMPIKPDARVWGPLLSACKMHPGSKLAEFAAEKLINMEPR 615
Query: 535 STGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHL 594
+ GNYIL++N++ +AG W A R + ++ L K PG S +EI+G V F D++H
Sbjct: 616 NAGNYILLSNIYAAAGKWDGVAKMRSFLRNKGLKKIPGCSWLEINGHVTEFRVADQTHPR 675
Query: 595 SVDIRKTLKELHIKLLE 611
+ DI L L +++ E
Sbjct: 676 AGDIYTILGNLELEIKE 692
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 119/491 (24%), Positives = 230/491 (46%), Gaps = 33/491 (6%)
Query: 32 TFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEM 91
T L+ C NSI +++H+ + GF Q+ + + LID Y+ S +V
Sbjct: 29 TLSLLFSRC---NSIQHLQQIHARFILHGFHQNPTLSSKLIDCYANLGLLNHSLQVF--C 83
Query: 92 PVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGC-SFRQ--- 147
V ++ +N+I+ +R ++ +LV ++M + T+ V+ C SF
Sbjct: 84 SVIDPNLTLFNAILRNLTRYGESERTLLVYQQMVAKSMHPDEETYPFVLRSCSSFSNVGF 143
Query: 148 GISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYV 207
G ++H + KLG ++ +A ++ MY + + A +FD+ + +++
Sbjct: 144 GRTIHGYLVKLGFDLFDV-VATALAEMYEECIEFENAHQLFDKRSVKDLGWPSSLTTEGP 202
Query: 208 NVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDP 267
N F + +M + PD F NL+ A + ++ LA +H + + S + +
Sbjct: 203 QNDNGEGIFRVFGRMIAEQLVPDSFTFFNLLRFIAGLNSIQLAKIVHCIAIVSKLSGDLL 262
Query: 268 LDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTS 327
++ ++S+Y+K L AR++FD + EK +W MI YA+ G P+E + LFK + ++
Sbjct: 263 VNTAVLSLYSKLRSLVDARKLFDKMPEKDRVVWNIMIAAYAREGKPTECLELFKSMARSG 322
Query: 328 VRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAK 387
+R + T +S+ A+L + GK+ +I+ NG +S V SLI M+ +C ++ A
Sbjct: 323 IRSDLFTALPVISSIAQLKCVDWGKQTHAHILRNGSDSQVSVHNSLIDMYCECKILDSAC 382
Query: 388 EVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHS 447
++F + DK AL+LF KM+ +G++ D V+ +IL A H
Sbjct: 383 KIFNWMTDKSSLT----------------ALSLFSKMKS-DGIQADFVIMINILPAFVHI 425
Query: 448 GMVDDGLSFFKSMQSNFGIE--PSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQV- 504
G +++ + + G+ PS+ L + + G ++A + E ++ + +
Sbjct: 426 GALEN-VKYLHGYSMKLGLTSLPSLNTALLIT--YAKCGSIEMAQRLFEEEKIDDKDLIM 482
Query: 505 WAPLLSACMKH 515
W ++SA H
Sbjct: 483 WNSMISAHANH 493
>gi|356502930|ref|XP_003520267.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Glycine max]
Length = 780
Score = 331 bits (848), Expect = 8e-88, Method: Compositional matrix adjust.
Identities = 193/604 (31%), Positives = 319/604 (52%), Gaps = 43/604 (7%)
Query: 50 KRVHSHVLKVGFQQDAFVQTGLIDMY--SKCSDFVSSRKVLDEMPVRLRSVVSWNSIISA 107
K++H+H+L+ D + + L+ Y S CS + ++ V +++P ++ WN++I
Sbjct: 89 KQIHAHMLRTSRFCDPYTASKLLTAYAISSCSCLIYAKNVFNQIPQP--NLYCWNTLIRG 146
Query: 108 HSRACLNDEAILVLKEMWVLGLELSAS-TFVSVVSGCS----FRQGISMHCCVYKLGLLN 162
++ + ++ L+ M E TF + S G +H V K L +
Sbjct: 147 YASSSDPTQSFLIFLHMLHSCSEFPNKFTFPFLFKAASRLKVLHLGSVLHGMVIKASL-S 205
Query: 163 NEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQM 222
+++ + NS+++ Y G + A +F + +VSW +I + G ++A L +M
Sbjct: 206 SDLFILNSLINFYGSSGAPDLAHRVFTNMPGKDVVSWNAMINAFALGGLPDKALLLFQEM 265
Query: 223 RRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDL 282
V P+++ ++++ CA+ +L + S + +G+ L+N ++ MY KCG +
Sbjct: 266 EMKDVKPNVITMVSVLSACAKKIDLEFGRWICSYIENNGFTEHLILNNAMLDMYVKCGCI 325
Query: 283 ELARRVFDAVLEKSVFLWTSMIGGYAQLG------------------------------- 311
A+ +F+ + EK + WT+M+ G+A+LG
Sbjct: 326 NDAKDLFNKMSEKDIVSWTTMLDGHAKLGNYDEAHCIFDAMPHKWTAAWNALISAYEQNG 385
Query: 312 YPSEAVNLFKRL-LKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQ 370
P A++LF + L +P+E TL L A A+LG++ G I YI + + N +
Sbjct: 386 KPRVALSLFHEMQLSKDAKPDEVTLICALCASAQLGAIDFGHWIHVYIKKHDINLNCHLA 445
Query: 371 TSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGL 430
TSL+ M++KCG +NKA EVF V KD+ VWSAMI A++G G AL+LF M +
Sbjct: 446 TSLLDMYAKCGNLNKAMEVFHAVERKDVYVWSAMIGALAMYGQGKAALDLFSSMLEAY-I 504
Query: 431 KPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLAL 490
KP+AV +T+IL AC+H+G+V++G F+ M+ +GI P I+HY+C+VD+ GRAG + A
Sbjct: 505 KPNAVTFTNILCACNHAGLVNEGEQLFEQMEPLYGIVPQIQHYVCVVDIFGRAGLLEKAA 564
Query: 491 KTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSAG 550
I +MP+ A VW LL AC +H NVEL E A +NLL L P + G ++L++N++ AG
Sbjct: 565 SFIEKMPIPPTAAVWGALLGACSRHGNVELAELAYQNLLELEPCNHGAFVLLSNIYAKAG 624
Query: 551 MWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKELHIKLL 610
W++ + R LM D + KEP S ++++G V F+ GD SH S I L E+ K
Sbjct: 625 DWEKVSNLRKLMRDSDVKKEPWCSSIDVNGIVHEFLVGDNSHPFSQKIYSKLDEISEKFK 684
Query: 611 EAGY 614
GY
Sbjct: 685 PIGY 688
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 63/281 (22%), Positives = 109/281 (38%), Gaps = 39/281 (13%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI G ++ L + M V N T VL ACA + G+ + S++ G
Sbjct: 245 MINAFALGGLPDKALLLFQEMEMKDVKPNVITMVSVLSACAKKIDLEFGRWICSYIENNG 304
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F + + ++DMY KC ++ + ++M + +VSW +++ H++ DEA +
Sbjct: 305 FTEHLILNNAMLDMYVKCGCINDAKDLFNKMSE--KDIVSWTTMLDGHAKLGNYDEAHCI 362
Query: 121 LKEM---WV---------------------------LGLELSASTFVSVVSGCSFRQ--- 147
M W L + + + C+ Q
Sbjct: 363 FDAMPHKWTAAWNALISAYEQNGKPRVALSLFHEMQLSKDAKPDEVTLICALCASAQLGA 422
Query: 148 ---GISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIG 204
G +H + K +N LA S++ MYAK G +N+A +F + + W+ +IG
Sbjct: 423 IDFGHWIHVYIKKHD-INLNCHLATSLLDMYAKCGNLNKAMEVFHAVERKDVYVWSAMIG 481
Query: 205 GYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVG 245
G A L + M + P+ V F N++ C G
Sbjct: 482 ALAMYGQGKAALDLFSSMLEAYIKPNAVTFTNILCACNHAG 522
>gi|147789959|emb|CAN73858.1| hypothetical protein VITISV_024322 [Vitis vinifera]
Length = 1539
Score = 331 bits (848), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 201/603 (33%), Positives = 335/603 (55%), Gaps = 18/603 (2%)
Query: 29 NSFTFPLVLKACANINSIWDGKR----VHSHVLKVGFQQDAF-VQTGLIDMYSKCSDFVS 83
NS ++ ++L A + + + +G+R VH+HV++ G + + GL++MY+K
Sbjct: 854 NSDSYVVLLSAFSEFSVLEEGRRKGREVHAHVIRTGLNDNKVAIGNGLVNMYAKSGAIAD 913
Query: 84 SRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGC 143
+ V + M + VSWNS+IS + +++A M G S T +S +S C
Sbjct: 914 ACSVFELMVEK--DSVSWNSLISGLDQNECSEDAAESFLRMRRTGSMPSNFTLISTLSSC 971
Query: 144 S----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSW 199
+ G +HC KLGL + ++ ++N+++++YA+ G E +F + E VSW
Sbjct: 972 ASLGWIMLGEQIHCDGLKLGL-DTDVSVSNALLALYAETGCFTECLKVFSLMPEYDQVSW 1030
Query: 200 TTIIGGYVNV-GNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLL 258
++IG + +V++A +M R V F+N++ + + ++ +H+L+L
Sbjct: 1031 NSVIGALSDSEASVSQAVKYFLEMMRGGWGLSRVTFINILSAVSSLSLHEVSHQIHALVL 1090
Query: 259 KSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLE-KSVFLWTSMIGGYAQLGYPSEAV 317
K +++ + N L+S Y KCG++ ++F + E + W SMI GY +A+
Sbjct: 1091 KYCLSDDTAIGNALLSCYGKCGEMNECEKIFARMSETRDEVSWNSMISGYIHNELLHKAM 1150
Query: 318 NLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMF 377
+L +++ R + T AT LSACA + +L +G E+ + +ES+ V ++L+ M+
Sbjct: 1151 DLVWFMMQKGQRLDSFTFATVLSACASVATLERGMEVHACGIRACMESDVVVGSALVDMY 1210
Query: 378 SKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVV- 436
SKCGRI+ A FE +P +++ W++MI+GYA HG G++AL LF +M ++G PD V
Sbjct: 1211 SKCGRIDYASRFFELMPLRNVYSWNSMISGYARHGHGEKALKLFTRMM-LDGQPPDHVAP 1269
Query: 437 YTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEM 496
+LSACSH G V++G FKSM + + P +EH+ C+VDLLGRAG+ D I+ M
Sbjct: 1270 LLGVLSACSHVGFVEEGFEHFKSMSEVYRLSPRVEHFSCMVDLLGRAGKLDEVGDFINSM 1329
Query: 497 PVEVQAQVWAPLLSACMKHH--NVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKE 554
P++ +W +L AC + + N ELG AA+ LL L P + NY+L+AN++ S W++
Sbjct: 1330 PMKPNVLIWRTVLGACCRANGRNTELGRRAAEMLLELEPQNAVNYVLLANMYASGEKWED 1389
Query: 555 AATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKELHIKLLEAGY 614
A AR M + + KE G S V + V VFVAGD+ H I L+EL+ K+ +AGY
Sbjct: 1390 VAKARXAMKEAAVKKEAGCSWVTMKDGVHVFVAGDKLHPEKDXIYDKLRELNRKMRDAGY 1449
Query: 615 IAE 617
I +
Sbjct: 1450 IPQ 1452
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 112/416 (26%), Positives = 213/416 (51%), Gaps = 16/416 (3%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+I N E+ ++ M +TG ++FT L +CA++ I G+++H LK+G
Sbjct: 932 LISGLDQNECSEDAAESFLRMRRTGSMPSNFTLISTLSSCASLGWIMLGEQIHCDGLKLG 991
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLN-DEAIL 119
D V L+ +Y++ F KV MP + VSWNS+I A S + + +A+
Sbjct: 992 LDTDVSVSNALLALYAETGCFTECLKVFSLMPEYDQ--VSWNSVIGALSDSEASVSQAVK 1049
Query: 120 VLKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLG------LLNNEIPLANSVMS 173
EM G LS TF++++S S +S+H +++ L+++ + N+++S
Sbjct: 1050 YFLEMMRGGWGLSRVTFINILSAVS---SLSLHEVSHQIHALVLKYCLSDDTAIGNALLS 1106
Query: 174 MYAKFGKVNEARSIFDEIGET-SIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLV 232
Y K G++NE IF + ET VSW ++I GY++ +++A L M + D
Sbjct: 1107 CYGKCGEMNECEKIFARMSETRDEVSWNSMISGYIHNELLHKAMDLVWFMMQKGQRLDSF 1166
Query: 233 VFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAV 292
F ++ CA V L + +H+ +++ ++ + + LV MY+KCG ++ A R F+ +
Sbjct: 1167 TFATVLSACASVATLERGMEVHACGIRACMESDVVVGSALVDMYSKCGRIDYASRFFELM 1226
Query: 293 LEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNE-ATLATTLSACAELGSLSKG 351
++V+ W SMI GYA+ G+ +A+ LF R++ P+ A L LSAC+ +G + +G
Sbjct: 1227 PLRNVYSWNSMISGYARHGHGEKALKLFTRMMLDGQPPDHVAPLLGVLSACSHVGFVEEG 1286
Query: 352 KE-IEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDK-DLAVWSAMI 405
E + + L + + ++ + + G++++ + +P K ++ +W ++
Sbjct: 1287 FEHFKSMSEVYRLSPRVEHFSCMVDLLGRAGKLDEVGDFINSMPMKPNVLIWRTVL 1342
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 128/467 (27%), Positives = 228/467 (48%), Gaps = 30/467 (6%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKAC--ANINSIWDGKRVHSHVLK 58
+I T NG +E + + M++ G N + F L+AC + + G ++H + K
Sbjct: 616 LISGYTQNGKPDEACARFRDMVRAGFIPNHYAFGSALRACQESGPSGCKLGVQIHGLISK 675
Query: 59 VGFQQDAFVQTGLIDMYSKCSDFVS-SRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEA 117
+ D V LI MY C D + +R V D + +R+ +SWNSIIS +SR A
Sbjct: 676 TRYGSDVVVCNVLISMYGSCLDSANDARSVFDR--IGIRNSISWNSIISVYSRRGDXVSA 733
Query: 118 ILVLKEMWVLGLELSAS----TFVSVVSG---------CSFRQGISMHCCVYKLGLLNNE 164
+ M GL S TF S+++ C Q ++ V K G L +
Sbjct: 734 YDLFSSMQKEGLGFSFKPNEYTFGSLITAACSSVDFGLCVLEQMLAR---VEKSGFL-QD 789
Query: 165 IPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRR 224
+ + ++++S +A+FG ++A++IF+++G ++VS ++ G V A + ++M+
Sbjct: 790 LYVGSALVSGFARFGLTDDAKNIFEQMGVRNVVSMNGLMVGLVKQKQGEAAAKVFHEMKD 849
Query: 225 M-SVTPD-LVVFLNLI--LGCAQVGNLFLALSMHSLLLKSGYN-NEDPLDNLLVSMYTKC 279
+ + D VV L+ + G +H+ ++++G N N+ + N LV+MY K
Sbjct: 850 LVGINSDSYVVLLSAFSEFSVLEEGRR-KGREVHAHVIRTGLNDNKVAIGNGLVNMYAKS 908
Query: 280 GDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTL 339
G + A VF+ ++EK W S+I G Q +A F R+ +T P+ TL +TL
Sbjct: 909 GAIADACSVFELMVEKDSVSWNSLISGLDQNECSEDAAESFLRMRRTGSMPSNFTLISTL 968
Query: 340 SACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLA 399
S+CA LG + G++I + GL+++ V +L+ ++++ G + +VF +P+ D
Sbjct: 969 SSCASLGWIMLGEQIHCDGLKLGLDTDVSVSNALLALYAETGCFTECLKVFSLMPEYDQV 1028
Query: 400 VWSAMINGYA-IHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACS 445
W+++I + QA+ F +M G V + +ILSA S
Sbjct: 1029 SWNSVIGALSDSEASVSQAVKYFLEMMR-GGWGLSRVTFINILSAVS 1074
Score = 141 bits (356), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 132/520 (25%), Positives = 236/520 (45%), Gaps = 39/520 (7%)
Query: 17 TYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYS 76
T +S T + +S TF ++ + + +H +K GF + F+ LI++Y
Sbjct: 531 TSTSHCNTTLFSSSETFESLINRYQGSCCSEEARELHLQSIKYGFVGNLFLSNTLINIYV 590
Query: 77 KCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTF 136
+ D S++K+ DEM R++V+W +IS +++ DEA ++M G + F
Sbjct: 591 RIGDLGSAQKLFDEMSN--RNLVTWACLISGYTQNGKPDEACARFRDMVRAGFIPNHYAF 648
Query: 137 VSVVSGCS------FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAK-FGKVNEARSIFD 189
S + C + G+ +H + K +++ + N ++SMY N+ARS+FD
Sbjct: 649 GSALRACQESGPSGCKLGVQIHGLISKT-RYGSDVVVCNVLISMYGSCLDSANDARSVFD 707
Query: 190 EIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRR----MSVTPDLVVFLNLIL-GCAQV 244
IG + +SW +II Y G+ A+ L + M++ S P+ F +LI C+ V
Sbjct: 708 RIGIRNSISWNSIISVYSRRGDXVSAYDLFSSMQKEGLGFSFKPNEYTFGSLITAACSSV 767
Query: 245 G-NLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSM 303
L + M + + KSG+ + + + LVS + + G + A+ +F+ + ++V +
Sbjct: 768 DFGLCVLEQMLARVEKSGFLQDLYVGSALVSGFARFGLTDDAKNIFEQMGVRNVVSMNGL 827
Query: 304 IGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLS----KGKEIEEYIV 359
+ G + A +F +K V N + LSA +E L KG+E+ +++
Sbjct: 828 MVGLVKQKQGEAAAKVFHE-MKDLVGINSDSYVVLLSAFSEFSVLEEGRRKGREVHAHVI 886
Query: 360 LNGLESNR-QVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQAL 418
GL N+ + L++M++K G I A VFE + +KD W+++I+G + + A
Sbjct: 887 RTGLNDNKVAIGNGLVNMYAKSGAIADACSVFELMVEKDSVSWNSLISGLDQNECSEDAA 946
Query: 419 NLFYKMQHVEGLKPDAVVYTSILSACSHSGMV-------DDGLSFFKSMQSNFGIEPSIE 471
F +M+ G P S LS+C+ G + DGL G++ +
Sbjct: 947 ESFLRMRRT-GSMPSNFTLISTLSSCASLGWIMLGEQIHCDGL--------KLGLDTDVS 997
Query: 472 HYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSA 511
L+ L G F LK MP E W ++ A
Sbjct: 998 VSNALLALYAETGCFTECLKVFSLMP-EYDQVSWNSVIGA 1036
Score = 129 bits (323), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 107/439 (24%), Positives = 219/439 (49%), Gaps = 26/439 (5%)
Query: 132 SASTFVSVVS----GCSFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSI 187
S+ TF S+++ C + +H K G + N + L+N+++++Y + G + A+ +
Sbjct: 543 SSETFESLINRYQGSCCSEEARELHLQSIKYGFVGN-LFLSNTLINIYVRIGDLGSAQKL 601
Query: 188 FDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVG-- 245
FDE+ ++V+W +I GY G +EA M R P+ F + + C + G
Sbjct: 602 FDEMSNRNLVTWACLISGYTQNGKPDEACARFRDMVRAGFIPNHYAFGSALRACQESGPS 661
Query: 246 NLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGD-LELARRVFDAVLEKSVFLWTSMI 304
L + +H L+ K+ Y ++ + N+L+SMY C D AR VFD + ++ W S+I
Sbjct: 662 GCKLGVQIHGLISKTRYGSDVVVCNVLISMYGSCLDSANDARSVFDRIGIRNSISWNSII 721
Query: 305 GGYAQLGYPSEAVNLFKRLLKT----SVRPNEATLATTLS-ACAELG-SLSKGKEIEEYI 358
Y++ G A +LF + K S +PNE T + ++ AC+ + L +++ +
Sbjct: 722 SVYSRRGDXVSAYDLFSSMQKEGLGFSFKPNEYTFGSLITAACSSVDFGLCVLEQMLARV 781
Query: 359 VLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQAL 418
+G + V ++L+ F++ G + AK +FE++ +++ + ++ G G+ A
Sbjct: 782 EKSGFLQDLYVGSALVSGFARFGLTDDAKNIFEQMGVRNVVSMNGLMVGLVKQKQGEAAA 841
Query: 419 NLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNF---GI-EPSIEHYL 474
+F++M+ + G+ D+ Y +LSA S ++++G + + ++ G+ + +
Sbjct: 842 KVFHEMKDLVGINSDS--YVVLLSAFSEFSVLEEGRRKGREVHAHVIRTGLNDNKVAIGN 899
Query: 475 CLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPG 534
LV++ ++G A ++ E+ VE + W L+S ++ E E AA++ L +
Sbjct: 900 GLVNMYAKSGAIADAC-SVFELMVEKDSVSWNSLISGLDQN---ECSEDAAESFLRMRRT 955
Query: 535 ST--GNYILMANLFTSAGM 551
+ N+ L++ L + A +
Sbjct: 956 GSMPSNFTLISTLSSCASL 974
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 107/223 (47%), Gaps = 8/223 (3%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI +N + + M+Q G +SFTF VL ACA++ ++ G VH+ ++
Sbjct: 1136 MISGYIHNELLHKAMDLVWFMMQKGQRLDSFTFATVLSACASVATLERGMEVHACGIRAC 1195
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+ D V + L+DMYSKC + + + MP LR+V SWNS+IS ++R ++A+ +
Sbjct: 1196 MESDVVVGSALVDMYSKCGRIDYASRFFELMP--LRNVYSWNSMISGYARHGHGEKALKL 1253
Query: 121 LKEMWVLGLELS-ASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMY 175
M + G + + V+S CS +G + ++ L+ + + ++ +
Sbjct: 1254 FTRMMLDGQPPDHVAPLLGVLSACSHVGFVEEGFEHFKSMSEVYRLSPRVEHFSCMVDLL 1313
Query: 176 AKFGKVNEARSIFDEIG-ETSIVSWTTIIGGYVNVGNVNEAFG 217
+ GK++E + + + +++ W T++G N G
Sbjct: 1314 GRAGKLDEVGDFINSMPMKPNVLIWRTVLGACCRANGRNTELG 1356
>gi|357487403|ref|XP_003613989.1| hypothetical protein MTR_5g043450 [Medicago truncatula]
gi|355515324|gb|AES96947.1| hypothetical protein MTR_5g043450 [Medicago truncatula]
Length = 828
Score = 331 bits (848), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 188/588 (31%), Positives = 318/588 (54%), Gaps = 8/588 (1%)
Query: 8 NGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFV 67
NG + E L + SM+ G+ +S V +AC I + K VH +V++ G D +
Sbjct: 181 NGVYREGLEMFRSMICEGIRPDSVMLLSVAEACGKIGCLRLAKSVHGYVMREGMVGDGSL 240
Query: 68 QTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVL 127
LI MYS+C ++++ + + RS W S+ISA+++ +EA+ V +M
Sbjct: 241 SNSLIVMYSQCGYLCRAKRLFE--CIDDRSTSCWTSMISAYNQNECFEEALDVFIKMQDS 298
Query: 128 GLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNE 183
+E + T +SV++ C+ ++G S+HC V + + + L +++ Y+ K++
Sbjct: 299 EVEPNDVTMISVLNSCARLGRLKEGKSVHCFVLRNAMGVTGLDLGPALIDFYSACWKMSS 358
Query: 184 ARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQ 243
+ IG +IVSW T+I Y G +EA M + PD + I A
Sbjct: 359 CEKLLHSIGNENIVSWNTLISFYAREGLNDEAMAFFACMVAKGIMPDSFSLASSISASAS 418
Query: 244 VGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSM 303
G++ +H ++K G+ +E + N L+ MY+KCG A +F+ + KS+ W M
Sbjct: 419 SGSIQFGQQIHGHVMKRGFFDE-FVQNSLMDMYSKCGFASSAYTIFNKIKHKSIVAWNCM 477
Query: 304 IGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGL 363
I G++Q G EA++LF + K + N+ T + + AC+ LG L KGK I I++ G
Sbjct: 478 ICGFSQNGISVEALSLFDEMFKNRLEINKVTFLSAIQACSNLGYLDKGKWIHHKIIVTGN 537
Query: 364 ESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYK 423
+++ + T+L+ M++KCG + A++VF+ + +K + WS MI + IHG + A +LF+K
Sbjct: 538 QNDLYIDTALVDMYAKCGDLQTAQKVFDSIVEKSVVSWSTMIAAHGIHGQINAATSLFHK 597
Query: 424 MQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRA 483
M + +KP+ V + +ILSAC H+G V +G +F +M+ +GI P++EH+ +VDLL RA
Sbjct: 598 MV-LSNIKPNEVTFMNILSACRHAGSVKEGKFYFNTMRDYYGIVPNVEHFASIVDLLSRA 656
Query: 484 GRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMA 543
G + A + I + V A +W LL+ C + +++ EY A+ L ++ TG Y L++
Sbjct: 657 GDINGAYEIIKSIRTPVAASIWGALLNGCRIYGRMDMIEYIAEELGGISTDDTGYYTLLS 716
Query: 544 NLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRS 591
N++ G W E+ R M+ L K PG+S VEID + F +GD S
Sbjct: 717 NIYAEGGNWYESRKVRSKMEGMGLKKVPGYSTVEIDRKIYRFGSGDTS 764
Score = 211 bits (537), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 146/452 (32%), Positives = 234/452 (51%), Gaps = 20/452 (4%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI N FEE L + M + V N T VL +CA + + +GK VH VL+
Sbjct: 275 MISAYNQNECFEEALDVFIKMQDSEVEPNDVTMISVLNSCARLGRLKEGKSVHCFVLRNA 334
Query: 61 FQQDAF-VQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAIL 119
+ LID YS C S K+L + ++VSWN++IS ++R LNDEA+
Sbjct: 335 MGVTGLDLGPALIDFYSACWKMSSCEKLLH--SIGNENIVSWNTLISFYAREGLNDEAMA 392
Query: 120 VLKEMWVLGL----ELSASTFVSVVSGCSFRQGISMHCCVYKLGLLNNEIPLANSVMSMY 175
M G+ AS+ + S S + G +H V K G + + NS+M MY
Sbjct: 393 FFACMVAKGIMPDSFSLASSISASASSGSIQFGQQIHGHVMKRGFFDEFVQ--NSLMDMY 450
Query: 176 AKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFL 235
+K G + A +IF++I SIV+W +I G+ G EA L ++M + + + V FL
Sbjct: 451 SKCGFASSAYTIFNKIKHKSIVAWNCMICGFSQNGISVEALSLFDEMFKNRLEINKVTFL 510
Query: 236 NLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEK 295
+ I C+ +G L +H ++ +G N+ +D LV MY KCGDL+ A++VFD+++EK
Sbjct: 511 SAIQACSNLGYLDKGKWIHHKIIVTGNQNDLYIDTALVDMYAKCGDLQTAQKVFDSIVEK 570
Query: 296 SVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGK--- 352
SV W++MI + G + A +LF +++ ++++PNE T LSAC GS+ +GK
Sbjct: 571 SVVSWSTMIAAHGIHGQINAATSLFHKMVLSNIKPNEVTFMNILSACRHAGSVKEGKFYF 630
Query: 353 -EIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLA-VWSAMINGYAI 410
+ +Y G+ N + S++ + S+ G IN A E+ + + A +W A++NG I
Sbjct: 631 NTMRDYY---GIVPNVEHFASIVDLLSRAGDINGAYEIIKSIRTPVAASIWGALLNGCRI 687
Query: 411 HGMGDQALNLFYKMQHVEGLKPDAVVYTSILS 442
+G D + Y + + G+ D Y ++LS
Sbjct: 688 YGRMDM---IEYIAEELGGISTDDTGYYTLLS 716
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 141/518 (27%), Positives = 263/518 (50%), Gaps = 27/518 (5%)
Query: 8 NGSFEETLSTYSSMLQTG---VHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQD 64
N F E LS ++ +Q G +F +P V++A + + G+++H +LK GF +D
Sbjct: 77 NHLFREVLSLFNHHIQMGSKLTQNCAFLYPSVIRAVTGVGELIVGRKLHGRILKSGFCED 136
Query: 65 AFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEM 124
+ T L+ MY + ++KV DEM V R +V W+SIIS + + E + + + M
Sbjct: 137 RVIGTSLVGMYGELCFLRDAKKVFDEMCV--RDLVLWSSIISCYVENGVYREGLEMFRSM 194
Query: 125 WVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGK 180
G+ + +SV C R S+H V + G++ + L+NS++ MY++ G
Sbjct: 195 ICEGIRPDSVMLLSVAEACGKIGCLRLAKSVHGYVMREGMVGDG-SLSNSLIVMYSQCGY 253
Query: 181 VNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILG 240
+ A+ +F+ I + S WT++I Y EA + +M+ V P+ V ++++
Sbjct: 254 LCRAKRLFECIDDRSTSCWTSMISAYNQNECFEEALDVFIKMQDSEVEPNDVTMISVLNS 313
Query: 241 CAQVGNLFLALSMHSLLLKS--GYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVF 298
CA++G L S+H +L++ G D L L+ Y+ C + ++ ++ +++
Sbjct: 314 CARLGRLKEGKSVHCFVLRNAMGVTGLD-LGPALIDFYSACWKMSSCEKLLHSIGNENIV 372
Query: 299 LWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYI 358
W ++I YA+ G EA+ F ++ + P+ +LA+++SA A GS+ G++I ++
Sbjct: 373 SWNTLISFYAREGLNDEAMAFFACMVAKGIMPDSFSLASSISASASSGSIQFGQQIHGHV 432
Query: 359 VLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQAL 418
+ G + VQ SL+ M+SKCG + A +F ++ K + W+ MI G++ +G+ +AL
Sbjct: 433 MKRGF-FDEFVQNSLMDMYSKCGFASSAYTIFNKIKHKSIVAWNCMICGFSQNGISVEAL 491
Query: 419 NLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSM-----QSNFGIEPSIEHY 473
+LF +M L+ + V + S + ACS+ G +D G + Q++ I+ +
Sbjct: 492 SLFDEM-FKNRLEINKVTFLSAIQACSNLGYLDKGKWIHHKIIVTGNQNDLYIDTA---- 546
Query: 474 LCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSA 511
LVD+ + G A K + VE W+ +++A
Sbjct: 547 --LVDMYAKCGDLQTAQKVFDSI-VEKSVVSWSTMIAA 581
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 106/408 (25%), Positives = 207/408 (50%), Gaps = 16/408 (3%)
Query: 34 PLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPV 93
PL + C+ + + ++H+H++ + T L++ YS+ SSR V P
Sbjct: 6 PL-FRTCSTLRRL---TQLHAHLVVTSLHNNPLASTKLLESYSQMGSLQSSRLVFYTHPS 61
Query: 94 RLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELS---ASTFVSVVSGCS----FR 146
++ +I H L E + + +G +L+ A + SV+ +
Sbjct: 62 P--DSFMFSVLIKCHLWNHLFREVLSLFNHHIQMGSKLTQNCAFLYPSVIRAVTGVGELI 119
Query: 147 QGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGY 206
G +H + K G + + + S++ MY + + +A+ +FDE+ +V W++II Y
Sbjct: 120 VGRKLHGRILKSGFCEDRV-IGTSLVGMYGELCFLRDAKKVFDEMCVRDLVLWSSIISCY 178
Query: 207 VNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNED 266
V G E + M + PD V+ L++ C ++G L LA S+H +++ G +
Sbjct: 179 VENGVYREGLEMFRSMICEGIRPDSVMLLSVAEACGKIGCLRLAKSVHGYVMREGMVGDG 238
Query: 267 PLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKT 326
L N L+ MY++CG L A+R+F+ + ++S WTSMI Y Q EA+++F ++ +
Sbjct: 239 SLSNSLIVMYSQCGYLCRAKRLFECIDDRSTSCWTSMISAYNQNECFEEALDVFIKMQDS 298
Query: 327 SVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLE-SNRQVQTSLIHMFSKCGRINK 385
V PN+ T+ + L++CA LG L +GK + +++ N + + + +LI +S C +++
Sbjct: 299 EVEPNDVTMISVLNSCARLGRLKEGKSVHCFVLRNAMGVTGLDLGPALIDFYSACWKMSS 358
Query: 386 AKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPD 433
+++ + ++++ W+ +I+ YA G+ D+A+ F M +G+ PD
Sbjct: 359 CEKLLHSIGNENIVSWNTLISFYAREGLNDEAMAFFACMV-AKGIMPD 405
>gi|357128364|ref|XP_003565843.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g47840-like [Brachypodium distachyon]
Length = 728
Score = 331 bits (848), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 204/606 (33%), Positives = 313/606 (51%), Gaps = 21/606 (3%)
Query: 28 GNSFTFPLVLKACANINSIW--DGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSR 85
+ F LV KA A + +H+ ++ FV T L D Y+K +
Sbjct: 110 ADPFVLSLVFKASAADPGLLLPHAASLHAFAVRSSALSSVFVATALADAYAKAGRLALAL 169
Query: 86 KVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWV-LGLELSASTFVSVVSGCS 144
+V DEMP R+VVSW ++++A SRA +A+ EM G+ + + + ++ C+
Sbjct: 170 RVFDEMPAARRNVVSWTTLVAALSRAGRRHDALRAFAEMRASAGVACDSHAYAAALTACA 229
Query: 145 ----FRQGISMHCCVYKLGLLNNEIP-LANSVMSMYAKFGKVNEARSIFDEIGETSIVSW 199
+G +H KLGL + P +AN++ ++YA++G V A + +G + +W
Sbjct: 230 DAGMLSRGREVHALCAKLGL--DATPYVANTLATLYARWGDVGRALAAVGRMGSRDVAAW 287
Query: 200 TTIIGGYVNVGNVNEAFGLCNQMRRM----SVTPDLVVFLNLILGCAQVGNLFLALSMHS 255
TT+I YV G EA M R + +P+ + +I CA + L +H
Sbjct: 288 TTVISSYVQTGRAKEAIEAFVAMVRNEAVNAASPNEYTYAAVIAACADTSCVCLGEQLHG 347
Query: 256 LLLKSGYNNEDPLDNLLVSMYTK-CGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPS 314
+ + G+ + + N LV++Y + G L A VF K V W+++I GYAQ G
Sbjct: 348 QVAQRGFASARSVANSLVTLYARVAGRLSAADAVFQESAAKDVVSWSAIISGYAQEGLAG 407
Query: 315 EAVNLFKRLLKTSV-RPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSL 373
EA LF + + RPNE TLA+ LS CA +L G+++ ++ GLE + ++++L
Sbjct: 408 EAFALFTEMRRHHCPRPNEFTLASLLSVCATAATLDAGRQLHALVMAAGLEHHAMIRSAL 467
Query: 374 IHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPD 433
+ M+ K G ++ A VF D+ W+AMI G+A HG +AL LF +M V GLKPD
Sbjct: 468 VDMYGKSGSMSDADVVFSNRTKDDVVSWTAMIVGHAEHGQSKRALELFEEMCLV-GLKPD 526
Query: 434 AVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTI 493
V + +LSAC H+G V+ GL + +M +G+EP+ EHY C+VDLLGRAGR + A + I
Sbjct: 527 HVAFIGVLSACCHAGEVELGLRYLSAMSKIYGLEPAKEHYGCVVDLLGRAGRINEAEELI 586
Query: 494 HEMPV-EVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMW 552
M E VW LL AC E G+ AA + P G ++ MANL+ S G W
Sbjct: 587 GRMAANERDGVVWTSLLRACAARGEEETGKKAAARAMEAEPWGAGAHVAMANLYASKGQW 646
Query: 553 KEAATARGLMDDRRLTKEPGWSQVEIDG---SVQVFVAGDRSHHLSVDIRKTLKELHIKL 609
EAA R +M + + K GWS + + G +V VFVAGDR+H I + L+ ++ +
Sbjct: 647 CEAAQERHMMKQKGVVKGVGWSSITVGGEDRAVGVFVAGDRTHPQDNVIYEMLELIYYGV 706
Query: 610 LEAGYI 615
A Y+
Sbjct: 707 GMARYV 712
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 112/422 (26%), Positives = 203/422 (48%), Gaps = 19/422 (4%)
Query: 6 TNNGSFEETLSTYSSMLQT-GVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQD 64
+ G + L ++ M + GV +S + L ACA+ + G+ VH+ K+G
Sbjct: 193 SRAGRRHDALRAFAEMRASAGVACDSHAYAAALTACADAGMLSRGREVHALCAKLGLDAT 252
Query: 65 AFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEM 124
+V L +Y++ D + + M R V +W ++IS++ + EAI M
Sbjct: 253 PYVANTLATLYARWGDVGRALAAVGRMGS--RDVAAWTTVISSYVQTGRAKEAIEAFVAM 310
Query: 125 WVLGLELSAS-----TFVSVVSGCSFRQ----GISMHCCVYKLGLLNNEIPLANSVMSMY 175
V ++A+ T+ +V++ C+ G +H V + G + +ANS++++Y
Sbjct: 311 -VRNEAVNAASPNEYTYAAVIAACADTSCVCLGEQLHGQVAQRGFASAR-SVANSLVTLY 368
Query: 176 AKF-GKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVT-PDLVV 233
A+ G+++ A ++F E +VSW+ II GY G EAF L +MRR P+
Sbjct: 369 ARVAGRLSAADAVFQESAAKDVVSWSAIISGYAQEGLAGEAFALFTEMRRHHCPRPNEFT 428
Query: 234 FLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVL 293
+L+ CA L +H+L++ +G + + + LV MY K G + A VF
Sbjct: 429 LASLLSVCATAATLDAGRQLHALVMAAGLEHHAMIRSALVDMYGKSGSMSDADVVFSNRT 488
Query: 294 EKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKG-K 352
+ V WT+MI G+A+ G A+ LF+ + ++P+ LSAC G + G +
Sbjct: 489 KDDVVSWTAMIVGHAEHGQSKRALELFEEMCLVGLKPDHVAFIGVLSACCHAGEVELGLR 548
Query: 353 EIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVP--DKDLAVWSAMINGYAI 410
+ + GLE ++ ++ + + GRIN+A+E+ R+ ++D VW++++ A
Sbjct: 549 YLSAMSKIYGLEPAKEHYGCVVDLLGRAGRINEAEELIGRMAANERDGVVWTSLLRACAA 608
Query: 411 HG 412
G
Sbjct: 609 RG 610
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/323 (23%), Positives = 150/323 (46%), Gaps = 14/323 (4%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQT----GVHGNSFTFPLVLKACANINSIWDGKRVHSHV 56
+I + G +E + + +M++ N +T+ V+ ACA+ + + G+++H V
Sbjct: 290 VISSYVQTGRAKEAIEAFVAMVRNEAVNAASPNEYTYAAVIAACADTSCVCLGEQLHGQV 349
Query: 57 LKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDE 116
+ GF V L+ +Y++ + +S+ + + + VVSW++IIS +++ L E
Sbjct: 350 AQRGFASARSVANSLVTLYARVAGRLSAADAVFQESA-AKDVVSWSAIISGYAQEGLAGE 408
Query: 117 AILVLKEMWVLGL----ELSASTFVSV-VSGCSFRQGISMHCCVYKLGLLNNEIPLANSV 171
A + EM E + ++ +SV + + G +H V GL ++ + + +++
Sbjct: 409 AFALFTEMRRHHCPRPNEFTLASLLSVCATAATLDAGRQLHALVMAAGLEHHAM-IRSAL 467
Query: 172 MSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDL 231
+ MY K G +++A +F + +VSWT +I G+ G A L +M + + PD
Sbjct: 468 VDMYGKSGSMSDADVVFSNRTKDDVVSWTAMIVGHAEHGQSKRALELFEEMCLVGLKPDH 527
Query: 232 VVFLNLILGCAQVGNLFLALSMHSLLLK-SGYNNEDPLDNLLVSMYTKCGDLELARRVFD 290
V F+ ++ C G + L L S + K G +V + + G + A +
Sbjct: 528 VAFIGVLSACCHAGEVELGLRYLSAMSKIYGLEPAKEHYGCVVDLLGRAGRINEAEELIG 587
Query: 291 --AVLEKSVFLWTSMIGGYAQLG 311
A E+ +WTS++ A G
Sbjct: 588 RMAANERDGVVWTSLLRACAARG 610
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 111/469 (23%), Positives = 197/469 (42%), Gaps = 45/469 (9%)
Query: 169 NSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGL-------CNQ 221
N+ + + G++ +A S+FD S++ ++ G+ G+ A L +
Sbjct: 44 NARLKRLVQSGRLADAHSLFDGAPHRDEASYSALLAGHAAAGDFAGAMALFVRLRRTSSS 103
Query: 222 MRRMSVTPDLVVFLNLILGCAQVGNLFL-ALSMHSLLLKSGYNNEDPLDNLLVSMYTKCG 280
R + V+ L A G L A S+H+ ++S + + L Y K G
Sbjct: 104 SRPLDAADPFVLSLVFKASAADPGLLLPHAASLHAFAVRSSALSSVFVATALADAYAKAG 163
Query: 281 DLELARRVFD--AVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTS-VRPNEATLAT 337
L LA RVFD ++V WT+++ ++ G +A+ F + ++ V + A
Sbjct: 164 RLALALRVFDEMPAARRNVVSWTTLVAALSRAGRRHDALRAFAEMRASAGVACDSHAYAA 223
Query: 338 TLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKD 397
L+ACA+ G LS+G+E+ GL++ V +L ++++ G + +A R+ +D
Sbjct: 224 ALTACADAGMLSRGREVHALCAKLGLDATPYVANTLATLYARWGDVGRALAAVGRMGSRD 283
Query: 398 LAVWSAMINGYAIHGMGDQALNLFYKM---QHVEGLKPDAVVYTSILSACSHSGMVDDGL 454
+A W+ +I+ Y G +A+ F M + V P+ Y ++++AC+ + V G
Sbjct: 284 VAAWTTVISSYVQTGRAKEAIEAFVAMVRNEAVNAASPNEYTYAAVIAACADTSCVCLGE 343
Query: 455 SFFKSM-QSNFGIEPSIEHYLCLVDLLGR-AGRFDLALKTIHEMPVEVQAQVWAPLLSAC 512
+ Q F S+ + LV L R AGR A E + W+ ++S
Sbjct: 344 QLHGQVAQRGFASARSVAN--SLVTLYARVAGRLSAADAVFQESAAK-DVVSWSAIISGY 400
Query: 513 MKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPG 572
+ E A L ++ N FT A + ATA L R+L
Sbjct: 401 AQ-------EGLAGEAFALFTEMRRHHCPRPNEFTLASLLSVCATAATLDAGRQL----- 448
Query: 573 WSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKELHIKLLEAGYIAEADIV 621
V AG H + IR L +++ K +G +++AD+V
Sbjct: 449 --------HALVMAAGLEHHAM---IRSALVDMYGK---SGSMSDADVV 483
>gi|20160775|dbj|BAB89716.1| PPR-repeat protein-like [Oryza sativa Japonica Group]
gi|125573261|gb|EAZ14776.1| hypothetical protein OsJ_04704 [Oryza sativa Japonica Group]
Length = 916
Score = 331 bits (848), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 194/586 (33%), Positives = 322/586 (54%), Gaps = 19/586 (3%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI+ N E + + M ++ + T ++ AC + + +GK VH +++K G
Sbjct: 339 MIKGLVENDRVNEAMCMFQEM-RSKNQPDVATLVTIISACGDHGLLPEGKEVHGYIIKKG 397
Query: 61 -FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSR-ACLNDEAI 118
++ V L+D+Y KC+D ++R + MP +R ++SWN++IS +SR L +EA
Sbjct: 398 HIYEECSVGNSLLDLYMKCNDPSTARILFRTMP--MRDLISWNTMISGYSRNDSLGEEAK 455
Query: 119 LVLKEMWVLGLELSASTFVSVVSGCSFRQ----GISMHCCVYKLGLLNNEIPLANSVMSM 174
+ K + GL + ST V+V+ C Q G S+H + K G L + ANS++ M
Sbjct: 456 AMFKGLLSEGLSCTLSTVVAVIPSCFCPQDLNFGKSVHSFILKYGFLTG-VSAANSLIHM 514
Query: 175 YAKFGKVNEARSIFDEIGETS-IVSWTTIIGGYVN---VGNVNEAFGLCNQMRRMSVTPD 230
Y G A S+ + I S I+SW T I G V G+ EAF + +++ PD
Sbjct: 515 YICCGDSLAAFSLLESITPISDIISWNTAIVGCVQNGLYGDALEAFQFMHST--LTLNPD 572
Query: 231 LVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFD 290
+ ++++ C + L S+H + LK + N L++MY + GD E A +F
Sbjct: 573 SITLVSVLSVCGNLKLQSLGKSIHCMALKRLIEFNLRVKNALLTMYFRFGDTESAELIFS 632
Query: 291 AVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSK 350
+++ +++ W MI G+AQ A +K++ PNE ++ + AC +LG L +
Sbjct: 633 SLVGRNLCSWNCMISGFAQNNEGLRAFQFYKKM--EDFEPNEISIVGIICACTQLGDLRQ 690
Query: 351 GKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAI 410
GK I ++V GL++N + SL+ M+SKCGR++ + VFE +K +A W++MI+ +
Sbjct: 691 GKNIHGHVVRFGLQTNVFISASLVDMYSKCGRLDISIRVFESSAEKSIACWNSMISAFGF 750
Query: 411 HGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSI 470
HG+G +++ +F+KM + G+K + ++LSACSHSG+ D+GL ++ M +FGI P+
Sbjct: 751 HGLGLKSIEIFWKMNN-SGVKATRSTFIALLSACSHSGLTDEGLKYYHLMIEHFGIIPTP 809
Query: 471 EHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLT 530
EH++C+VD+LGRAGR A K + +P + VW LLSAC K +++ E AK+LL
Sbjct: 810 EHHVCVVDMLGRAGRLQEAHKFVESLPSKQAHGVWGALLSACSKKSELKMCESVAKHLLC 869
Query: 531 LNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQV 576
L P ++G Y+ M+NL+ MW A R ++ D+ L K G S +
Sbjct: 870 LEPENSGYYVTMSNLYAYQDMWSGAVQVRDILQDKGLMKPRGRSII 915
Score = 178 bits (451), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 126/426 (29%), Positives = 196/426 (46%), Gaps = 15/426 (3%)
Query: 29 NSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVL 88
+S + ++L + S+ G H LK D + L+DMY+KC DF SS V
Sbjct: 163 DSTSMVIMLSGASRARSLEHGIAFHGMALKRCLDTDLSLWNTLMDMYAKCGDFYSSEVVF 222
Query: 89 DEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCS---- 144
MP R SWNS++S L + + KEM + + V+S CS
Sbjct: 223 QRMP--YRDTTSWNSMVSGSLFNGLAEISAYYFKEMVRSSFQADEVSLSCVLSACSHLKD 280
Query: 145 -FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTII 203
F G S+H V KLG + +ANS+++ Y + G A +F ++V+W +I
Sbjct: 281 LFSFGESVHSSVIKLGYEDTTSSVANSLITFYYELGFPEAAEEVFLSTSNKNLVTWNAMI 340
Query: 204 GGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYN 263
G V VNEA + +MR + PD+ + +I C G L +H ++K G+
Sbjct: 341 KGLVENDRVNEAMCMFQEMRSKN-QPDVATLVTIISACGDHGLLPEGKEVHGYIIKKGHI 399
Query: 264 NED-PLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQ---LGYPSEAVNL 319
E+ + N L+ +Y KC D AR +F + + + W +MI GY++ LG EA +
Sbjct: 400 YEECSVGNSLLDLYMKCNDPSTARILFRTMPMRDLISWNTMISGYSRNDSLG--EEAKAM 457
Query: 320 FKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSK 379
FK LL + +T+ + +C L+ GK + +I+ G + SLIHM+
Sbjct: 458 FKGLLSEGLSCTLSTVVAVIPSCFCPQDLNFGKSVHSFILKYGFLTGVSAANSLIHMYIC 517
Query: 380 CGRINKAKEVFERV-PDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYT 438
CG A + E + P D+ W+ I G +G+ AL F M L PD++
Sbjct: 518 CGDSLAAFSLLESITPISDIISWNTAIVGCVQNGLYGDALEAFQFMHSTLTLNPDSITLV 577
Query: 439 SILSAC 444
S+LS C
Sbjct: 578 SVLSVC 583
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 121/420 (28%), Positives = 214/420 (50%), Gaps = 19/420 (4%)
Query: 52 VHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRA 111
+H LK G D V+T +I YS+ D S+ +V DE ++ WN+ ISA +
Sbjct: 85 LHCAALKSGAVLDPPVRTSVITAYSRVRDVCSALQVFDEAAA--PDLILWNAAISALTLN 142
Query: 112 CLNDEAILVLKEMW-VLGLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIP 166
C +A+++ + M VLG+ + +++ V ++SG S GI+ H K L+ ++
Sbjct: 143 CRYGDAVVLFRWMVDVLGV-IDSTSMVIMLSGASRARSLEHGIAFHGMALK-RCLDTDLS 200
Query: 167 LANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMS 226
L N++M MYAK G + +F + SW +++ G + G + +M R S
Sbjct: 201 LWNTLMDMYAKCGDFYSSEVVFQRMPYRDTTSWNSMVSGSLFNGLAEISAYYFKEMVRSS 260
Query: 227 VTPDLVVFLNLILGCAQVGNLF-LALSMHSLLLKSGY-NNEDPLDNLLVSMYTKCGDLEL 284
D V ++ C+ + +LF S+HS ++K GY + + N L++ Y + G E
Sbjct: 261 FQADEVSLSCVLSACSHLKDLFSFGESVHSSVIKLGYEDTTSSVANSLITFYYELGFPEA 320
Query: 285 ARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAE 344
A VF + K++ W +MI G + +EA+ +F+ +++ +P+ ATL T +SAC +
Sbjct: 321 AEEVFLSTSNKNLVTWNAMIKGLVENDRVNEAMCMFQE-MRSKNQPDVATLVTIISACGD 379
Query: 345 LGSLSKGKEIEEYIVLNG-LESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSA 403
G L +GKE+ YI+ G + V SL+ ++ KC + A+ +F +P +DL W+
Sbjct: 380 HGLLPEGKEVHGYIIKKGHIYEECSVGNSLLDLYMKCNDPSTARILFRTMPMRDLISWNT 439
Query: 404 MINGYAIH-GMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQS 462
MI+GY+ + +G++A +F + EGL +++ +C L+F KS+ S
Sbjct: 440 MISGYSRNDSLGEEAKAMFKGLLS-EGLSCTLSTVVAVIPSC----FCPQDLNFGKSVHS 494
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 82/306 (26%), Positives = 146/306 (47%), Gaps = 5/306 (1%)
Query: 150 SMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNV 209
++HC K G + + P+ SV++ Y++ V A +FDE ++ W I
Sbjct: 84 ALHCAALKSGAVLDP-PVRTSVITAYSRVRDVCSALQVFDEAAAPDLILWNAAISALTLN 142
Query: 210 GNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLD 269
+A L M + D + ++ G ++ +L ++ H + LK + + L
Sbjct: 143 CRYGDAVVLFRWMVDVLGVIDSTSMVIMLSGASRARSLEHGIAFHGMALKRCLDTDLSLW 202
Query: 270 NLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVR 329
N L+ MY KCGD + VF + + W SM+ G G + FK ++++S +
Sbjct: 203 NTLMDMYAKCGDFYSSEVVFQRMPYRDTTSWNSMVSGSLFNGLAEISAYYFKEMVRSSFQ 262
Query: 330 PNEATLATTLSACAELGSL-SKGKEIEEYIVLNGLE-SNRQVQTSLIHMFSKCGRINKAK 387
+E +L+ LSAC+ L L S G+ + ++ G E + V SLI + + G A+
Sbjct: 263 ADEVSLSCVLSACSHLKDLFSFGESVHSSVIKLGYEDTTSSVANSLITFYYELGFPEAAE 322
Query: 388 EVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHS 447
EVF +K+L W+AMI G + ++A+ +F +M+ +PD +I+SAC
Sbjct: 323 EVFLSTSNKNLVTWNAMIKGLVENDRVNEAMCMFQEMRSKN--QPDVATLVTIISACGDH 380
Query: 448 GMVDDG 453
G++ +G
Sbjct: 381 GLLPEG 386
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 105/212 (49%), Gaps = 4/212 (1%)
Query: 252 SMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLG 311
++H LKSG + P+ +++ Y++ D+ A +VFD + LW + I
Sbjct: 84 ALHCAALKSGAVLDPPVRTSVITAYSRVRDVCSALQVFDEAAAPDLILWNAAISALTLNC 143
Query: 312 YPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQT 371
+AV LF+ ++ + ++ LS + SL G + L+++ +
Sbjct: 144 RYGDAVVLFRWMVDVLGVIDSTSMVIMLSGASRARSLEHGIAFHGMALKRCLDTDLSLWN 203
Query: 372 SLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLK 431
+L+ M++KCG ++ VF+R+P +D W++M++G +G+ + + F +M +
Sbjct: 204 TLMDMYAKCGDFYSSEVVFQRMPYRDTTSWNSMVSGSLFNGLAEISAYYFKEMVR-SSFQ 262
Query: 432 PDAVVYTSILSACSHSGMVDDGLSFFKSMQSN 463
D V + +LSACSH + D SF +S+ S+
Sbjct: 263 ADEVSLSCVLSACSH---LKDLFSFGESVHSS 291
>gi|356498879|ref|XP_003518275.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Glycine max]
Length = 754
Score = 331 bits (848), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 186/599 (31%), Positives = 325/599 (54%), Gaps = 20/599 (3%)
Query: 31 FTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDE 90
F PL L+ C + S + VH HV+K G + FV + L+++Y+KC + +R+V +
Sbjct: 66 FYVPL-LQQCLDKRSYSGTQIVHGHVMKTGCHDNFFVMSFLVNVYAKCGNMEDARRVFEN 124
Query: 91 MPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCSFRQ--- 147
MP R+VV+W +++ + AI V +EM G S T +V+ CS Q
Sbjct: 125 MP--RRNVVAWTTLMVGFVQNSQPKHAIHVFQEMLYAGSYPSIYTLSAVLHACSSLQSLK 182
Query: 148 -GISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGY 206
G H + K L + + + +++ S+Y+K G++ +A F I E +++SWT+ +
Sbjct: 183 LGDQFHAYIIKYHL-DFDTSVGSALCSLYSKCGRLEDALKAFSRIREKNVISWTSAVSAC 241
Query: 207 VNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNED 266
+ G + L +M + P+ + + C ++ +L L + SL +K GY +
Sbjct: 242 GDNGAPVKGLRLFVEMISEDIKPNEFTLTSALSQCCEIPSLELGTQVCSLCIKFGYESNL 301
Query: 267 PLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQL-----------GYPSE 315
+ N L+ +Y K G + A R F+ + + S+ W +MI G+AQ+ SE
Sbjct: 302 RVRNSLLYLYLKSGFIVEAHRFFNRMDDVSMVTWNAMIAGHAQMMELTKDNLSACQRGSE 361
Query: 316 AVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIH 375
A+ +F +L ++ ++P+ TL++ LS C+ + ++ +G++I + G S+ V TSLI
Sbjct: 362 ALKIFSKLNQSGMKPDLFTLSSVLSVCSRMLAIEQGEQIHAQTIKTGFLSDVIVSTSLIS 421
Query: 376 MFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAV 435
M++KCG I +A + F + + + W++MI G++ HGM QAL++F M + G++P+ V
Sbjct: 422 MYNKCGSIERASKAFLEMSTRTMIAWTSMITGFSQHGMSQQALHIFEDMS-LAGVRPNTV 480
Query: 436 VYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHE 495
+ +LSACSH+GMV L++F+ MQ + I+P ++HY C+VD+ R GR + AL I +
Sbjct: 481 TFVGVLSACSHAGMVSQALNYFEIMQKKYKIKPVMDHYECMVDMFVRLGRLEQALNFIKK 540
Query: 496 MPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEA 555
M E +W+ ++ C H N+ELG YA++ LL+L P Y+L+ N++ SA + +
Sbjct: 541 MNYEPSEFIWSNFIAGCRSHGNLELGFYASEQLLSLKPKDPETYVLLLNMYLSADRFDDV 600
Query: 556 ATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKELHIKLLEAGY 614
+ R +M+ ++ K WS + I V F D++H S I K+L++L K GY
Sbjct: 601 SRVRKMMEVEKVGKLKDWSWISIKDKVYSFKTNDKTHPPSSLICKSLEDLLAKAKNLGY 659
Score = 164 bits (416), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 113/417 (27%), Positives = 204/417 (48%), Gaps = 26/417 (6%)
Query: 116 EAILVLKEMWVLGLELSASTF-VSVVSGCSFRQGIS----MHCCVYKLGLLNNEIPLANS 170
EA+L+ KE G E F V ++ C ++ S +H V K G +N ++
Sbjct: 50 EALLLNKE----GTEEEEKLFYVPLLQQCLDKRSYSGTQIVHGHVMKTGCHDNFFVMS-F 104
Query: 171 VMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPD 230
++++YAK G + +AR +F+ + ++V+WTT++ G+V A + +M P
Sbjct: 105 LVNVYAKCGNMEDARRVFENMPRRNVVAWTTLMVGFVQNSQPKHAIHVFQEMLYAGSYPS 164
Query: 231 LVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFD 290
+ ++ C+ + +L L H+ ++K + + + + L S+Y+KCG LE A + F
Sbjct: 165 IYTLSAVLHACSSLQSLKLGDQFHAYIIKYHLDFDTSVGSALCSLYSKCGRLEDALKAFS 224
Query: 291 AVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSK 350
+ EK+V WTS + G P + + LF ++ ++PNE TL + LS C E+ SL
Sbjct: 225 RIREKNVISWTSAVSACGDNGAPVKGLRLFVEMISEDIKPNEFTLTSALSQCCEIPSLEL 284
Query: 351 GKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYA- 409
G ++ + G ESN +V+ SL++++ K G I +A F R+ D + W+AMI G+A
Sbjct: 285 GTQVCSLCIKFGYESNLRVRNSLLYLYLKSGFIVEAHRFFNRMDDVSMVTWNAMIAGHAQ 344
Query: 410 ----------IHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFF-K 458
G +AL +F K+ G+KPD +S+LS CS ++ G +
Sbjct: 345 MMELTKDNLSACQRGSEALKIFSKLNQ-SGMKPDLFTLSSVLSVCSRMLAIEQGEQIHAQ 403
Query: 459 SMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKH 515
++++ F + + L+ + + G + A K EM W +++ +H
Sbjct: 404 TIKTGFLSDVIVS--TSLISMYNKCGSIERASKAFLEMSTRTMI-AWTSMITGFSQH 457
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 125/509 (24%), Positives = 237/509 (46%), Gaps = 56/509 (11%)
Query: 7 NNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAF 66
N + + + ML G + + +T VL AC+++ S+ G + H++++K D
Sbjct: 142 QNSQPKHAIHVFQEMLYAGSYPSIYTLSAVLHACSSLQSLKLGDQFHAYIIKYHLDFDTS 201
Query: 67 VQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWV 126
V + L +YSKC + K +R ++V+SW S +SA + + + EM
Sbjct: 202 VGSALCSLYSKCGRLEDALKAFSR--IREKNVISWTSAVSACGDNGAPVKGLRLFVEMIS 259
Query: 127 LGLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVN 182
++ + T S +S C S G + K G +N + + NS++ +Y K G +
Sbjct: 260 EDIKPNEFTLTSALSQCCEIPSLELGTQVCSLCIKFGYESN-LRVRNSLLYLYLKSGFIV 318
Query: 183 EARSIFDEIGETSIVSWTTIIGGYVNVGNV-----------NEAFGLCNQMRRMSVTPDL 231
EA F+ + + S+V+W +I G+ + + +EA + +++ + + PDL
Sbjct: 319 EAHRFFNRMDDVSMVTWNAMIAGHAQMMELTKDNLSACQRGSEALKIFSKLNQSGMKPDL 378
Query: 232 VVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDA 291
+++ C+++ + +H+ +K+G+ ++ + L+SMY KCG +E A + F
Sbjct: 379 FTLSSVLSVCSRMLAIEQGEQIHAQTIKTGFLSDVIVSTSLISMYNKCGSIERASKAFLE 438
Query: 292 VLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKG 351
+ +++ WTSMI G++Q G +A+++F+ + VRPN T LSAC+ G +S+
Sbjct: 439 MSTRTMIAWTSMITGFSQHGMSQQALHIFEDMSLAGVRPNTVTFVGVLSACSHAGMVSQA 498
Query: 352 KEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIH 411
LN E I + K + V D + M++ +
Sbjct: 499 --------LNYFE------------------IMQKKYKIKPVMDH----YECMVDMFVRL 528
Query: 412 GMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPS-I 470
G +QALN KM + +P ++++ ++ C G ++ L F+ S Q ++P
Sbjct: 529 GRLEQALNFIKKMNY----EPSEFIWSNFIAGCRSHGNLE--LGFYASEQL-LSLKPKDP 581
Query: 471 EHYLCLVDLLGRAGRFDLALKTIHEMPVE 499
E Y+ L+++ A RFD + M VE
Sbjct: 582 ETYVLLLNMYLSADRFDDVSRVRKMMEVE 610
>gi|359477376|ref|XP_002280144.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Vitis vinifera]
Length = 642
Score = 331 bits (848), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 199/625 (31%), Positives = 322/625 (51%), Gaps = 61/625 (9%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+I N ++E S + M + + +FT VLKA A + G+ V+ VLK G
Sbjct: 72 LIHGYVENRQYDEAFSLFIQMRREPISVLNFTISSVLKALARLTRFKGGQAVYGFVLKYG 131
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F D VQ ++D++ +C ++R+ DEM + +VSWN +IS + N++ + +
Sbjct: 132 FAFDLIVQNSVLDLFMRCRKVDTARQAFDEMCE--KDIVSWNMMISGYG----NNDRVDI 185
Query: 121 LKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGK 180
++ + E + ++ S++ G Y K G
Sbjct: 186 ARKFFDRMPERNVVSWTSMICG--------------------------------YVKAGD 213
Query: 181 VNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILG 240
+ EA+ +FD + + SW ++ GY+++G+ C R ++F + +
Sbjct: 214 MAEAQVLFDSMPVKDLASWNVMVSGYMDIGD-------CVNAR--------IIFGKMPIH 258
Query: 241 CAQVGNLFLALSMHSLLLKSGYNNEDPLDN-------LLVSMYTKCGDLELARRVFDAVL 293
N+ ++ + L+S + D + N +++ Y K GD AR +FD +
Sbjct: 259 DTGSWNIMISGFCKAGELESAKDFFDRMPNKNVISWGIMLDGYIKNGDTNGARCLFDQMP 318
Query: 294 EKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKE 353
K++ W++MIGGYA+ G P +A+ LF+R + ++P+E + +SAC++LG + +
Sbjct: 319 MKNLVTWSTMIGGYARNGQPLKALELFERFKEQDIKPDETFILGIISACSQLGIIDAAES 378
Query: 354 IEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGM 413
I V L S+ +V TSLI M++KCG I KA ++FE KDL +S MI A HG+
Sbjct: 379 IIHNYVGPSLLSDLRVFTSLIDMYAKCGSIEKALQMFEMAHPKDLLCYSTMIAALANHGL 438
Query: 414 GDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHY 473
G A+ LF KMQ +KPD+V + +L+AC+H G+VD+G +FK M FGI+PS +HY
Sbjct: 439 GRDAIFLFDKMQRAN-IKPDSVTFLGVLTACNHGGLVDEGRKYFKQMTEEFGIQPSEKHY 497
Query: 474 LCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNP 533
C+VDLLGR G + A I MP+ + VW LL+AC H NV+L E AA L + P
Sbjct: 498 ACVVDLLGRVGCLEEAYNLIRNMPIAPHSVVWGALLAACRVHCNVQLAEVAAAELFKIEP 557
Query: 534 GSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHH 593
++GNYIL++N++ +AG W A R + + R+ K G S +E+ V FV GD SH
Sbjct: 558 DNSGNYILLSNIYAAAGRWGSVAKVRAKIREHRVRKNRGSSWIELSHVVHEFVMGDMSHT 617
Query: 594 LSVDIRKTLKELHIKLLEAGYIAEA 618
S I L L + +GY+ ++
Sbjct: 618 DSDSISLILYLLCEDMKLSGYLIDS 642
>gi|357483151|ref|XP_003611862.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355513197|gb|AES94820.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 663
Score = 331 bits (848), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 188/618 (30%), Positives = 320/618 (51%), Gaps = 42/618 (6%)
Query: 32 TFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEM 91
T ++ C ++ + K VH+ ++ G L+ + D + K+ D++
Sbjct: 38 TLHYLIDQCISLKQL---KHVHAQIILHGLATQVLTLGKLVSSSVQLRDLRYAHKLFDQI 94
Query: 92 PVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCSFRQ---- 147
P + + +N +I +S + +++L+ + M G+ + T V+ C+ +
Sbjct: 95 PQPNKFM--FNHLIKGYSNSSDPIKSLLLYRRMVCDGILPNQFTIPFVLKACAAKSCYWL 152
Query: 148 GISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYV 207
G+ +H +KLG+ + + N+++++Y G + AR +FD+I E ++VSW ++I GY
Sbjct: 153 GVCVHAQSFKLGM-GSHACVQNAILNIYVACGLITSARRVFDDISERTLVSWNSMINGYS 211
Query: 208 NVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDP 267
+G EA + +M+ + + PD+ + L+ + GN L +H ++ +G +
Sbjct: 212 KMGRSEEAVLMFREMQEVGLEPDVFTLVGLLSVSTKHGNFDLGRFVHLHMVVTGIEIDSI 271
Query: 268 LDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYA------------------- 308
+ N L+ MY KCG+L+ A+ VFD +L+K V WT MI YA
Sbjct: 272 VTNALMDMYAKCGNLKCAKSVFDQMLDKDVVSWTCMINAYANHGLIDCALEFFNQMPGKN 331
Query: 309 ------------QLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEE 356
Q G +EAV+LF R+ + V N+ TL LS+C+ +G L+ GK+
Sbjct: 332 VVSWNSIIWCHVQEGLYAEAVDLFYRMCDSGVMANDTTLVAILSSCSHMGDLALGKQAHS 391
Query: 357 YIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQ 416
YI N + + + ++I M++KCG + A +VF +P+K+ W+ +I A+HG G +
Sbjct: 392 YIFDNNITLSATLCNAIIDMYAKCGALQTAMDVFFGMPEKNAVSWNVIIGALALHGYGKE 451
Query: 417 ALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCL 476
A+ +F KMQ G+ PD + +T +LSACSHSG+VD G +F+ M FGI P +EHY C+
Sbjct: 452 AIEMFEKMQ-ASGVCPDEITFTGLLSACSHSGLVDTGQHYFEIMNLTFGISPDVEHYACM 510
Query: 477 VDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGST 536
VDLLGR G A+ I +MPV+ VW+ LL AC + N+ +G+ K LL L ++
Sbjct: 511 VDLLGRRGLLGEAISLIKKMPVKPDVVVWSALLGACRTYGNLAIGKQIMKQLLELGRYNS 570
Query: 537 GNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSV 596
G Y+L++N+++ + W + ++D + K S +EIDG F+ D+ H S
Sbjct: 571 GLYVLLSNMYSESQRWDDMKNIWKILDQNGIKKCRAISFIEIDGCCYQFMVDDKRHGAST 630
Query: 597 DIRKTLKELHIKLLEAGY 614
I L +L L AGY
Sbjct: 631 SIYSMLGQLMDHLKSAGY 648
Score = 204 bits (520), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 143/500 (28%), Positives = 248/500 (49%), Gaps = 42/500 (8%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+I+ +N+ ++L Y M+ G+ N FT P VLKACA + W G VH+ K+G
Sbjct: 105 LIKGYSNSSDPIKSLLLYRRMVCDGILPNQFTIPFVLKACAAKSCYWLGVCVHAQSFKLG 164
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
A VQ ++++Y C S+R+V D+ + R++VSWNS+I+ +S+ ++EA+L+
Sbjct: 165 MGSHACVQNAILNIYVACGLITSARRVFDD--ISERTLVSWNSMINGYSKMGRSEEAVLM 222
Query: 121 LKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
+EM +GLE T V ++S + F G +H + G+ + I + N++M MYA
Sbjct: 223 FREMQEVGLEPDVFTLVGLLSVSTKHGNFDLGRFVHLHMVVTGIEIDSI-VTNALMDMYA 281
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQM-------------- 222
K G + A+S+FD++ + +VSWT +I Y N G ++ A NQM
Sbjct: 282 KCGNLKCAKSVFDQMLDKDVVSWTCMINAYANHGLIDCALEFFNQMPGKNVVSWNSIIWC 341
Query: 223 --------------RRM---SVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNE 265
RM V + + ++ C+ +G+L L HS + +
Sbjct: 342 HVQEGLYAEAVDLFYRMCDSGVMANDTTLVAILSSCSHMGDLALGKQAHSYIFDNNITLS 401
Query: 266 DPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLK 325
L N ++ MY KCG L+ A VF + EK+ W +IG A GY EA+ +F+++
Sbjct: 402 ATLCNAIIDMYAKCGALQTAMDVFFGMPEKNAVSWNVIIGALALHGYGKEAIEMFEKMQA 461
Query: 326 TSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLN-GLESNRQVQTSLIHMFSKCGRIN 384
+ V P+E T LSAC+ G + G+ E + L G+ + + ++ + + G +
Sbjct: 462 SGVCPDEITFTGLLSACSHSGLVDTGQHYFEIMNLTFGISPDVEHYACMVDLLGRRGLLG 521
Query: 385 KAKEVFERVPDK-DLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSA 443
+A + +++P K D+ VWSA++ A G+ A+ Q +E + ++ +Y + +
Sbjct: 522 EAISLIKKMPVKPDVVVWSALLG--ACRTYGNLAIGKQIMKQLLELGRYNSGLYVLLSNM 579
Query: 444 CSHSGMVDDGLSFFKSMQSN 463
S S DD + +K + N
Sbjct: 580 YSESQRWDDMKNIWKILDQN 599
>gi|297735486|emb|CBI17926.3| unnamed protein product [Vitis vinifera]
Length = 602
Score = 330 bits (847), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 184/546 (33%), Positives = 296/546 (54%), Gaps = 39/546 (7%)
Query: 97 SVVSWNSIISAHSRACL--NDEAILVLKEMWVLGLELSASTFV----SVVSGCSFRQGIS 150
+V WN++I L D +L + GL + TF+ ++VSG ++G
Sbjct: 53 NVFVWNTMIRKQVENGLITRDPPLLYYMQGLRAGLRPNGHTFMYLLKALVSGQEVKEGEE 112
Query: 151 MHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVG 210
+H V + G +E ++ +++ Y G V + R +FDE+ + +V WT II YV V
Sbjct: 113 VHASVVRTGFACSEF-VSGALLGFYVACGLVGKGRQVFDEMRQPGLVLWTLIIRAYVCVT 171
Query: 211 NVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDN 270
+A L MR + +TPD+V ++ C +G+L +A +MH + KSG + + +
Sbjct: 172 FPEKALELFRTMREVGLTPDMVAISTVVSACGLLGDLGVAKAMHCFIEKSGIEVDAFVSS 231
Query: 271 LLVSMYTKCG-------------------------------DLELARRVFDAVLEKSVFL 299
L+S Y +CG +LEL +++F ++ ++ V
Sbjct: 232 TLISTYGECGSLDYAYRFFQETPMKNIVVWNTMIHQSVEHNNLELGKQLFQSMPDRDVVS 291
Query: 300 WTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIV 359
W SMIGG+A++G EA+ F + + V PN TL +TLSACA G+L G I Y+
Sbjct: 292 WNSMIGGFARIGQYQEALTWFHEMEFSGVSPNALTLLSTLSACASHGALDTGAWIHAYVD 351
Query: 360 LNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALN 419
N + + + +SLI M+SKCG I+KA ++FE +DL W++++ G A+HG G++AL+
Sbjct: 352 KNDMNRDGSLDSSLIDMYSKCGDIDKAVQIFEESTRRDLFTWTSIVCGLAMHGRGEKALH 411
Query: 420 LFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDL 479
F KM+ + ++PD V +LSAC+H+G++D G +F+SM+ FG+ P +EHY C+VDL
Sbjct: 412 YFSKMKEAQ-VQPDDVTMVGVLSACAHAGLLDQGWWYFQSMEKVFGLVPKVEHYGCMVDL 470
Query: 480 LGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNY 539
LGR G A I MP+E +W LSAC H+NVELGE AA+ LL L+P
Sbjct: 471 LGRMGCLKEAYDLIMGMPMEANEIIWGAFLSACRVHNNVELGEVAARRLLGLDPRDPWAR 530
Query: 540 ILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIR 599
++++N++ W + R + + L K PG S +E++GSV F+ GD SH +I
Sbjct: 531 VMLSNMYAEEAKWDRSMGLRKEIKKKGLKKSPGCSSIEVNGSVHGFLVGDNSHPCYTEIN 590
Query: 600 KTLKEL 605
++++
Sbjct: 591 SMVEKI 596
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 115/453 (25%), Positives = 215/453 (47%), Gaps = 48/453 (10%)
Query: 1 MIRNSTNNG--SFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLK 58
MIR NG + + L Y L+ G+ N TF +LKA + + +G+ VH+ V++
Sbjct: 60 MIRKQVENGLITRDPPLLYYMQGLRAGLRPNGHTFMYLLKALVSGQEVKEGEEVHASVVR 119
Query: 59 VGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAI 118
GF FV L+ Y C R+V DEM R +V W II A+ ++A+
Sbjct: 120 TGFACSEFVSGALLGFYVACGLVGKGRQVFDEM--RQPGLVLWTLIIRAYVCVTFPEKAL 177
Query: 119 LVLKEMWVLGLELSASTFVSVVSGCSFRQGI----SMHCCVYKLGLLNNEIPLANSVMSM 174
+ + M +GL +VVS C + +MHC + K G+ + ++++++S
Sbjct: 178 ELFRTMREVGLTPDMVAISTVVSACGLLGDLGVAKAMHCFIEKSGIEVDAF-VSSTLIST 236
Query: 175 YAKFGKVNEA-------------------------------RSIFDEIGETSIVSWTTII 203
Y + G ++ A + +F + + +VSW ++I
Sbjct: 237 YGECGSLDYAYRFFQETPMKNIVVWNTMIHQSVEHNNLELGKQLFQSMPDRDVVSWNSMI 296
Query: 204 GGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYN 263
GG+ +G EA ++M V+P+ + L+ + CA G L +H+ + K+ N
Sbjct: 297 GGFARIGQYQEALTWFHEMEFSGVSPNALTLLSTLSACASHGALDTGAWIHAYVDKNDMN 356
Query: 264 NEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRL 323
+ LD+ L+ MY+KCGD++ A ++F+ + +F WTS++ G A G +A++ F ++
Sbjct: 357 RDGSLDSSLIDMYSKCGDIDKAVQIFEESTRRDLFTWTSIVCGLAMHGRGEKALHYFSKM 416
Query: 324 LKTSVRPNEATLATTLSACAELGSLSKG----KEIEEYIVLNGLESNRQVQTSLIHMFSK 379
+ V+P++ T+ LSACA G L +G + +E+ GL + ++ + +
Sbjct: 417 KEAQVQPDDVTMVGVLSACAHAGLLDQGWWYFQSMEKVF---GLVPKVEHYGCMVDLLGR 473
Query: 380 CGRINKAKEVFERVP-DKDLAVWSAMINGYAIH 411
G + +A ++ +P + + +W A ++ +H
Sbjct: 474 MGCLKEAYDLIMGMPMEANEIIWGAFLSACRVH 506
>gi|225428647|ref|XP_002281535.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic [Vitis vinifera]
gi|297741370|emb|CBI32501.3| unnamed protein product [Vitis vinifera]
Length = 697
Score = 330 bits (847), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 174/577 (30%), Positives = 313/577 (54%), Gaps = 9/577 (1%)
Query: 50 KRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHS 109
+++H+ ++ G + F+ L++ Y C ++++ P ++VVSW +IS +
Sbjct: 41 QQIHAQIITSGLTHNTFLSNSLMNAYVYCGLLADAKQIFHHTP--YKNVVSWTILISGLA 98
Query: 110 RACLNDEAILVLKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEI 165
+ EAI V +EM + + +A T SV+ + R S+HC + G N +
Sbjct: 99 KNDCFVEAIDVFREMIMGNFKPNAVTISSVLPAFANLGLIRIAKSVHCFWVRGGFEGN-V 157
Query: 166 PLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRM 225
+ +++ MY+KFG + AR +F+ + E ++V+W I+ GY + G EA L N MRR
Sbjct: 158 FVETALVDMYSKFGCMGVARQLFESMSERNVVTWNAIVSGYSDHGFSEEAIDLFNLMRRK 217
Query: 226 SVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELA 285
+ D ++LI VG L + +H ++++GY N+ + L+ +Y ++ A
Sbjct: 218 GLLVDFYTIMSLIPASLSVGCLQVGTGIHGFIIRTGYENDKHIKTALMDIYVSHNCVDDA 277
Query: 286 RRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLK-TSVRPNEATLATTLSACAE 344
RVF + K V WT M+ G++ + A+ F ++L +++ + L LS+C+
Sbjct: 278 HRVFSEMSVKDVAAWTLMLTGFSSGRHWDRAIKHFNKMLGIQNLKLDSIALMGILSSCSH 337
Query: 345 LGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAM 404
G+L +G+ + + +N V +++I M++ CG + AK F + +KD+ W+AM
Sbjct: 338 SGALQQGRRVHALAIKTCFANNIFVGSAVIDMYANCGNLEDAKRFFYGMGEKDVVCWNAM 397
Query: 405 INGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNF 464
I G ++G G A++LF +M+ GL PD + S+L ACSH+GMV +GL F M
Sbjct: 398 IAGNGMNGYGTDAIDLFLQMKG-SGLDPDESTFVSVLYACSHAGMVYEGLQIFYHMVKTS 456
Query: 465 GIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYA 524
+ P+++HY C++D+LGRAG+ D A I+ MP + V++ LL AC H N++LG
Sbjct: 457 HVIPNLQHYACVIDILGRAGQLDAAYSFINNMPFQPDFDVYSTLLGACRIHGNIKLGHEI 516
Query: 525 AKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQV 584
++ + + P G Y+L++N++ AG W+ R + +R+ K+PG+S +EI+ +
Sbjct: 517 SQKIFEMEPNDAGYYVLLSNMYALAGNWEGVKMTRASLRSKRMKKDPGFSSIEINQEIYT 576
Query: 585 FVAGDRSHHLSVDIRKTLKELHIKLLEAGYIAEADIV 621
F+AG++ H I LK L +K+ +AGY+ +++
Sbjct: 577 FMAGEKDHPQYFKIEGILKGLILKIKKAGYVPNTNVL 613
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 114/420 (27%), Positives = 215/420 (51%), Gaps = 12/420 (2%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+I N F E + + M+ N+ T VL A AN+ I K VH ++ G
Sbjct: 93 LISGLAKNDCFVEAIDVFREMIMGNFKPNAVTISSVLPAFANLGLIRIAKSVHCFWVRGG 152
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F+ + FV+T L+DMYSK +R++ + M R+VV+WN+I+S +S ++EAI +
Sbjct: 153 FEGNVFVETALVDMYSKFGCMGVARQLFESMSE--RNVVTWNAIVSGYSDHGFSEEAIDL 210
Query: 121 LKEMWVLGLELSASTFVSVVS-----GCSFRQGISMHCCVYKLGLLNNEIPLANSVMSMY 175
M GL + T +S++ GC + G +H + + G N++ + ++M +Y
Sbjct: 211 FNLMRRKGLLVDFYTIMSLIPASLSVGC-LQVGTGIHGFIIRTGYENDK-HIKTALMDIY 268
Query: 176 AKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRM-SVTPDLVVF 234
V++A +F E+ + +WT ++ G+ + + + A N+M + ++ D +
Sbjct: 269 VSHNCVDDAHRVFSEMSVKDVAAWTLMLTGFSSGRHWDRAIKHFNKMLGIQNLKLDSIAL 328
Query: 235 LNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLE 294
+ ++ C+ G L +H+L +K+ + N + + ++ MY CG+LE A+R F + E
Sbjct: 329 MGILSSCSHSGALQQGRRVHALAIKTCFANNIFVGSAVIDMYANCGNLEDAKRFFYGMGE 388
Query: 295 KSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEI 354
K V W +MI G GY ++A++LF ++ + + P+E+T + L AC+ G + +G +I
Sbjct: 389 KDVVCWNAMIAGNGMNGYGTDAIDLFLQMKGSGLDPDESTFVSVLYACSHAGMVYEGLQI 448
Query: 355 EEYIV-LNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVP-DKDLAVWSAMINGYAIHG 412
++V + + N Q +I + + G+++ A +P D V+S ++ IHG
Sbjct: 449 FYHMVKTSHVIPNLQHYACVIDILGRAGQLDAAYSFINNMPFQPDFDVYSTLLGACRIHG 508
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 90/203 (44%), Gaps = 3/203 (1%)
Query: 313 PSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTS 372
P N ++ L + S +L L ++I I+ +GL N + S
Sbjct: 2 PPVNFNFYRHLSSNPTQRLSPLAQPHASILRKLKDLKPLQQIHAQIITSGLTHNTFLSNS 61
Query: 373 LIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKP 432
L++ + CG + AK++F P K++ W+ +I+G A + +A+++F +M + KP
Sbjct: 62 LMNAYVYCGLLADAKQIFHHTPYKNVVSWTILISGLAKNDCFVEAIDVFREMI-MGNFKP 120
Query: 433 DAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKT 492
+AV +S+L A ++ G++ S G E ++ LVD+ + G +A +
Sbjct: 121 NAVTISSVLPAFANLGLIRIAKS-VHCFWVRGGFEGNVFVETALVDMYSKFGCMGVARQL 179
Query: 493 IHEMPVEVQAQVWAPLLSACMKH 515
M E W ++S H
Sbjct: 180 FESMS-ERNVVTWNAIVSGYSDH 201
>gi|242079801|ref|XP_002444669.1| hypothetical protein SORBIDRAFT_07g025740 [Sorghum bicolor]
gi|241941019|gb|EES14164.1| hypothetical protein SORBIDRAFT_07g025740 [Sorghum bicolor]
Length = 581
Score = 330 bits (847), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 177/470 (37%), Positives = 273/470 (58%), Gaps = 8/470 (1%)
Query: 125 WVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEA 184
+ L + SA++ + VS G +H KLGL+++ L NS+++MY+ A
Sbjct: 94 YSLNIAFSATSRLPSVS-----VGAQLHSLSVKLGLVSDTFVL-NSLINMYSSCSYPATA 147
Query: 185 RSIFDEI--GETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCA 242
R + D G VSW TII GY+ G N+A QM + VT D V LN ++ A
Sbjct: 148 RQVLDSAPQGACDTVSWNTIISGYLRGGMPNKALQAFGQMVKEQVTLDDVTLLNALVASA 207
Query: 243 QVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTS 302
+ G + + HSL++ +G + + L+SMY KCG +E AR+VF + E++V WTS
Sbjct: 208 KAGKVKVGRLCHSLVVVNGAGINCYMGSSLISMYAKCGLVEDARKVFHGMHERNVVCWTS 267
Query: 303 MIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNG 362
MI GY QLG EAVNLF+ + T ++ ++ T+AT +S+CA++G+L G+ + Y ++G
Sbjct: 268 MISGYTQLGKFKEAVNLFRDMQITGMKVDDGTIATVVSSCAQMGALDLGRYVHAYCDVHG 327
Query: 363 LESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFY 422
L V+ SLI M+SKCG INKA E+F + +D+ W+AMI G+ ++G+ +AL+LF
Sbjct: 328 LGKELSVKNSLIDMYSKCGDINKAHEIFCGLTKRDVFSWTAMIMGFTVNGLCSEALDLFA 387
Query: 423 KMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGR 482
+M+ + P+ V + +L++CSH G+V+ G +F+ M + + P IEHY C+VDLLGR
Sbjct: 388 QMEGEGKVMPNEVTFLGVLTSCSHGGLVEQGFHYFQRMSMVYKLAPRIEHYGCMVDLLGR 447
Query: 483 AGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILM 542
A A + I MP+ VW LL AC V L E+ A+ +L L P ++L+
Sbjct: 448 AKLLTEAEQFIKNMPIAPDVVVWRSLLFACRACGEVGLAEFVAERILELEPKKCAGHVLL 507
Query: 543 ANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSH 592
+N++ + W + R MD+ R++K+PG S +E+DG V F AGD SH
Sbjct: 508 SNVYATTSRWVDVNELRTSMDNSRMSKQPGCSFIEVDGCVHEFFAGDESH 557
Score = 176 bits (445), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 116/420 (27%), Positives = 212/420 (50%), Gaps = 9/420 (2%)
Query: 29 NSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVL 88
++++ + A + + S+ G ++HS +K+G D FV LI+MYS CS ++R+VL
Sbjct: 92 DNYSLNIAFSATSRLPSVSVGAQLHSLSVKLGLVSDTFVLNSLINMYSSCSYPATARQVL 151
Query: 89 DEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCSFRQG 148
D P VSWN+IIS + R + ++A+ +M + L T ++ + +
Sbjct: 152 DSAPQGACDTVSWNTIISGYLRGGMPNKALQAFGQMVKEQVTLDDVTLLNALVASAKAGK 211
Query: 149 ISMHCCVYKLGLLNN---EIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGG 205
+ + + L ++N + +S++SMYAK G V +AR +F + E ++V WT++I G
Sbjct: 212 VKVGRLCHSLVVVNGAGINCYMGSSLISMYAKCGLVEDARKVFHGMHERNVVCWTSMISG 271
Query: 206 YVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNE 265
Y +G EA L M+ + D ++ CAQ+G L L +H+ G E
Sbjct: 272 YTQLGKFKEAVNLFRDMQITGMKVDDGTIATVVSSCAQMGALDLGRYVHAYCDVHGLGKE 331
Query: 266 DPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLL- 324
+ N L+ MY+KCGD+ A +F + ++ VF WT+MI G+ G SEA++LF ++
Sbjct: 332 LSVKNSLIDMYSKCGDINKAHEIFCGLTKRDVFSWTAMIMGFTVNGLCSEALDLFAQMEG 391
Query: 325 KTSVRPNEATLATTLSACAELGSLSKG-KEIEEYIVLNGLESNRQVQTSLIHMFSKCGRI 383
+ V PNE T L++C+ G + +G + ++ L + ++ + + +
Sbjct: 392 EGKVMPNEVTFLGVLTSCSHGGLVEQGFHYFQRMSMVYKLAPRIEHYGCMVDLLGRAKLL 451
Query: 384 NKAKEVFERVP-DKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILS 442
+A++ + +P D+ VW +++ +A G+ L F + +E L+P +LS
Sbjct: 452 TEAEQFIKNMPIAPDVVVWRSLL--FACRACGEVGLAEFVAERILE-LEPKKCAGHVLLS 508
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/252 (28%), Positives = 124/252 (49%), Gaps = 12/252 (4%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+I G + L + M++ V + T L A A + G+ HS V+ G
Sbjct: 167 IISGYLRGGMPNKALQAFGQMVKEQVTLDDVTLLNALVASAKAGKVKVGRLCHSLVVVNG 226
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+ ++ + LI MY+KC +RKV M R+VV W S+IS +++ EA+ +
Sbjct: 227 AGINCYMGSSLISMYAKCGLVEDARKVFHGM--HERNVVCWTSMISGYTQLGKFKEAVNL 284
Query: 121 LKEMWVLGLELSASTFVSVVSGCS------FRQGISMHCCVYKLGLLNNEIPLANSVMSM 174
++M + G+++ T +VVS C+ + + +C V+ LG E+ + NS++ M
Sbjct: 285 FRDMQITGMKVDDGTIATVVSSCAQMGALDLGRYVHAYCDVHGLG---KELSVKNSLIDM 341
Query: 175 YAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMR-RMSVTPDLVV 233
Y+K G +N+A IF + + + SWT +I G+ G +EA L QM V P+ V
Sbjct: 342 YSKCGDINKAHEIFCGLTKRDVFSWTAMIMGFTVNGLCSEALDLFAQMEGEGKVMPNEVT 401
Query: 234 FLNLILGCAQVG 245
FL ++ C+ G
Sbjct: 402 FLGVLTSCSHGG 413
>gi|125529041|gb|EAY77155.1| hypothetical protein OsI_05121 [Oryza sativa Indica Group]
Length = 916
Score = 330 bits (847), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 194/586 (33%), Positives = 323/586 (55%), Gaps = 19/586 (3%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI+ N E + + M ++ + T ++ AC + + +GK VH +++K G
Sbjct: 339 MIKGLVENDRVNEAMCMFQEM-RSKNQPDVATLVTIISACGDRGLLPEGKEVHGYIIKKG 397
Query: 61 -FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSR-ACLNDEAI 118
++ V L+D+Y KC+D ++R + MP +R ++SWN++IS +SR L +EA
Sbjct: 398 HIYEECSVGNSLLDLYMKCNDPSTARILFRTMP--MRDLISWNTMISGYSRNDSLGEEAK 455
Query: 119 LVLKEMWVLGLELSASTFVSVVSGCSFRQ----GISMHCCVYKLGLLNNEIPLANSVMSM 174
+ K + GL + ST V+V+ C Q G S+H + K G L + ANS++ M
Sbjct: 456 AMFKGLLSEGLSCTLSTVVAVIPSCFCPQDLNFGKSVHSFILKYGFLTG-VSAANSLIHM 514
Query: 175 YAKFGKVNEARSIFDEIGETS-IVSWTTIIGGYVN---VGNVNEAFGLCNQMRRMSVTPD 230
Y G A S+ + I S I+SW T I G V G+ EAF + +++ PD
Sbjct: 515 YICCGDSLAAFSLLESITPMSDIISWNTAIVGCVQNGLYGDALEAFQFMHST--LTLNPD 572
Query: 231 LVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFD 290
+ ++++ C + L S+H + LK + N L++MY + GD E A +F
Sbjct: 573 SITLVSVLSVCGNLKLQSLGKSIHCMALKRLIEFNLRVKNALLTMYFRFGDTESAELIFS 632
Query: 291 AVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSK 350
+++ +++ W MI G+AQ A+ +K++ PNE ++ + AC +LG L +
Sbjct: 633 SLVGRNLCSWNCMISGFAQNNEGLRALQFYKKM--EYFEPNEISIVGIICACTQLGDLRQ 690
Query: 351 GKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAI 410
GK I ++V GL++N + SL+ M+SKCGR++ + VFE +K +A W++MI+ +
Sbjct: 691 GKNIHGHVVRFGLQTNVFISASLVDMYSKCGRLDISIRVFESSAEKSIACWNSMISAFGF 750
Query: 411 HGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSI 470
HG+G +++ +F+KM + G+K + ++LSACSHSG+ D+GL ++ M +FGI P+
Sbjct: 751 HGLGLKSIEIFWKMNN-SGVKATRSTFIALLSACSHSGLTDEGLKYYHLMIEHFGIIPTP 809
Query: 471 EHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLT 530
EH++C+VD+LGRAGR A K + +P + VW LLSAC K +++ E AK+LL
Sbjct: 810 EHHVCVVDMLGRAGRLQEAHKFVESLPSKQAHGVWGALLSACSKKSELKMCESVAKHLLC 869
Query: 531 LNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQV 576
L P ++G Y+ M+NL+ MW A R ++ D+ L K G S +
Sbjct: 870 LEPENSGYYVTMSNLYAYQDMWSGAVQVRDILQDKGLMKPRGRSII 915
Score = 176 bits (446), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 125/426 (29%), Positives = 195/426 (45%), Gaps = 15/426 (3%)
Query: 29 NSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVL 88
+S + ++L + S+ G H LK D + L+DMY+KC DF SS V
Sbjct: 163 DSTSMVIMLSGASRARSLEHGIAFHGMALKRRLDTDLSLWNTLMDMYAKCGDFYSSEVVF 222
Query: 89 DEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCS---- 144
MP R SWNS++S L + + KEM + + V+S CS
Sbjct: 223 QRMP--YRDTTSWNSMVSGSLFNGLAEISAYYFKEMVRSSFQADEVSLSCVLSACSHLKD 280
Query: 145 -FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTII 203
F G S+H V KLG + + NS+++ Y + G A +F ++V+W +I
Sbjct: 281 LFSFGESVHSSVIKLGYEDTTSSVENSLITFYYELGFPEAAEEVFLSTSNKNLVTWNAMI 340
Query: 204 GGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYN 263
G V VNEA + +MR + PD+ + +I C G L +H ++K G+
Sbjct: 341 KGLVENDRVNEAMCMFQEMRSKN-QPDVATLVTIISACGDRGLLPEGKEVHGYIIKKGHI 399
Query: 264 NED-PLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQ---LGYPSEAVNL 319
E+ + N L+ +Y KC D AR +F + + + W +MI GY++ LG EA +
Sbjct: 400 YEECSVGNSLLDLYMKCNDPSTARILFRTMPMRDLISWNTMISGYSRNDSLG--EEAKAM 457
Query: 320 FKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSK 379
FK LL + +T+ + +C L+ GK + +I+ G + SLIHM+
Sbjct: 458 FKGLLSEGLSCTLSTVVAVIPSCFCPQDLNFGKSVHSFILKYGFLTGVSAANSLIHMYIC 517
Query: 380 CGRINKAKEVFERV-PDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYT 438
CG A + E + P D+ W+ I G +G+ AL F M L PD++
Sbjct: 518 CGDSLAAFSLLESITPMSDIISWNTAIVGCVQNGLYGDALEAFQFMHSTLTLNPDSITLV 577
Query: 439 SILSAC 444
S+LS C
Sbjct: 578 SVLSVC 583
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 120/420 (28%), Positives = 213/420 (50%), Gaps = 19/420 (4%)
Query: 52 VHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRA 111
+H LK D V+T +I YS+ D S+ +V DE ++ WN+ ISA +
Sbjct: 85 LHCAALKSAAVLDPPVRTSVITAYSRVRDVCSALQVFDEAAA--PDLILWNAAISALTLN 142
Query: 112 CLNDEAILVLKEMW-VLGLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIP 166
C +A+++ + M VLG+ +++ V ++SG S GI+ H K L+ ++
Sbjct: 143 CRYGDAVVLFRWMVDVLGV-FDSTSMVIMLSGASRARSLEHGIAFHGMALK-RRLDTDLS 200
Query: 167 LANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMS 226
L N++M MYAK G + +F + SW +++ G + G + +M R S
Sbjct: 201 LWNTLMDMYAKCGDFYSSEVVFQRMPYRDTTSWNSMVSGSLFNGLAEISAYYFKEMVRSS 260
Query: 227 VTPDLVVFLNLILGCAQVGNLF-LALSMHSLLLKSGY-NNEDPLDNLLVSMYTKCGDLEL 284
D V ++ C+ + +LF S+HS ++K GY + ++N L++ Y + G E
Sbjct: 261 FQADEVSLSCVLSACSHLKDLFSFGESVHSSVIKLGYEDTTSSVENSLITFYYELGFPEA 320
Query: 285 ARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAE 344
A VF + K++ W +MI G + +EA+ +F+ +++ +P+ ATL T +SAC +
Sbjct: 321 AEEVFLSTSNKNLVTWNAMIKGLVENDRVNEAMCMFQE-MRSKNQPDVATLVTIISACGD 379
Query: 345 LGSLSKGKEIEEYIVLNG-LESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSA 403
G L +GKE+ YI+ G + V SL+ ++ KC + A+ +F +P +DL W+
Sbjct: 380 RGLLPEGKEVHGYIIKKGHIYEECSVGNSLLDLYMKCNDPSTARILFRTMPMRDLISWNT 439
Query: 404 MINGYAIH-GMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQS 462
MI+GY+ + +G++A +F + EGL +++ +C L+F KS+ S
Sbjct: 440 MISGYSRNDSLGEEAKAMFKGLLS-EGLSCTLSTVVAVIPSC----FCPQDLNFGKSVHS 494
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 81/306 (26%), Positives = 146/306 (47%), Gaps = 5/306 (1%)
Query: 150 SMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNV 209
++HC K + + P+ SV++ Y++ V A +FDE ++ W I
Sbjct: 84 ALHCAALKSAAVLDP-PVRTSVITAYSRVRDVCSALQVFDEAAAPDLILWNAAISALTLN 142
Query: 210 GNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLD 269
+A L M + D + ++ G ++ +L ++ H + LK + + L
Sbjct: 143 CRYGDAVVLFRWMVDVLGVFDSTSMVIMLSGASRARSLEHGIAFHGMALKRRLDTDLSLW 202
Query: 270 NLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVR 329
N L+ MY KCGD + VF + + W SM+ G G + FK ++++S +
Sbjct: 203 NTLMDMYAKCGDFYSSEVVFQRMPYRDTTSWNSMVSGSLFNGLAEISAYYFKEMVRSSFQ 262
Query: 330 PNEATLATTLSACAELGSL-SKGKEIEEYIVLNGLE-SNRQVQTSLIHMFSKCGRINKAK 387
+E +L+ LSAC+ L L S G+ + ++ G E + V+ SLI + + G A+
Sbjct: 263 ADEVSLSCVLSACSHLKDLFSFGESVHSSVIKLGYEDTTSSVENSLITFYYELGFPEAAE 322
Query: 388 EVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHS 447
EVF +K+L W+AMI G + ++A+ +F +M+ +PD +I+SAC
Sbjct: 323 EVFLSTSNKNLVTWNAMIKGLVENDRVNEAMCMFQEMRSKN--QPDVATLVTIISACGDR 380
Query: 448 GMVDDG 453
G++ +G
Sbjct: 381 GLLPEG 386
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 104/212 (49%), Gaps = 4/212 (1%)
Query: 252 SMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLG 311
++H LKS + P+ +++ Y++ D+ A +VFD + LW + I
Sbjct: 84 ALHCAALKSAAVLDPPVRTSVITAYSRVRDVCSALQVFDEAAAPDLILWNAAISALTLNC 143
Query: 312 YPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQT 371
+AV LF+ ++ + ++ LS + SL G + L+++ +
Sbjct: 144 RYGDAVVLFRWMVDVLGVFDSTSMVIMLSGASRARSLEHGIAFHGMALKRRLDTDLSLWN 203
Query: 372 SLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLK 431
+L+ M++KCG ++ VF+R+P +D W++M++G +G+ + + F +M +
Sbjct: 204 TLMDMYAKCGDFYSSEVVFQRMPYRDTTSWNSMVSGSLFNGLAEISAYYFKEMVR-SSFQ 262
Query: 432 PDAVVYTSILSACSHSGMVDDGLSFFKSMQSN 463
D V + +LSACSH + D SF +S+ S+
Sbjct: 263 ADEVSLSCVLSACSH---LKDLFSFGESVHSS 291
>gi|302785790|ref|XP_002974666.1| hypothetical protein SELMODRAFT_101 [Selaginella moellendorffii]
gi|300157561|gb|EFJ24186.1| hypothetical protein SELMODRAFT_101 [Selaginella moellendorffii]
Length = 921
Score = 330 bits (847), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 182/559 (32%), Positives = 305/559 (54%), Gaps = 22/559 (3%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI G E L Y M + + VL+AC+ + ++ G+ VHS +
Sbjct: 373 MIAAYNQRGYSMEALELYHCM---DIEPDDIALSNVLQACSRLKNLEQGRAVHSRIASRD 429
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F+ VQT L+DMY KC D +R+ D + R V+SW S+I+A+S EA+ V
Sbjct: 430 FEPSLMVQTLLVDMYVKCGDLAEARRTFDGF--KARDVISWTSLITAYSHENFGREALEV 487
Query: 121 LKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
M + G+E ++ TF +V+ CS G ++H V G +++E + N+++SMY+
Sbjct: 488 FHSMELEGVEPNSITFCTVIDACSRLSSLLPGRALHSRVVATGHISDEF-VGNALVSMYS 546
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
KFG+V+ AR +FD I SW ++ G+ +EA + +++ P +F
Sbjct: 547 KFGRVDFARVVFDSIPVKRYPSWRVMLVALTQNGHSHEALEMYSRIHLEGFRPGSPIFSA 606
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
++ C + ++ A ++H ++ S + + L N+L+++Y KCG+LE AR VFD + EK+
Sbjct: 607 ALVSCTALEDVSRARAIHGVIKSSDFYPDLVLSNVLMNVYAKCGELEEARLVFDQMTEKN 666
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEE 356
WT+MIGGYAQ G P+EA+ L+K + V+PN +S+CA+LG+L +G+ +
Sbjct: 667 EVSWTTMIGGYAQNGRPAEALELYKAM---DVQPNFIAFVPVISSCADLGALVEGQRVHA 723
Query: 357 YIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQ 416
+ GL++N + T+L++M++KCG++ A+E F+ D W++M YA G G Q
Sbjct: 724 RLSDAGLQNNEVIVTALVNMYAKCGKLGLAREFFDSTYCPDAGAWNSMATAYAQFGHGSQ 783
Query: 417 ALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCL 476
L L+ +M ++G++P+ + S+L ACSH GM+++ F+ M ++ GI P+ EHY C+
Sbjct: 784 VLELYREMC-LQGVQPNGITLLSVLVACSHMGMLEECEHRFECMVADHGIAPTSEHYSCM 842
Query: 477 VDLLGRAGRFDLALKTIH--------EMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNL 528
DLLGR+GR + A K + E V W L AC H++ AA+ L
Sbjct: 843 TDLLGRSGRLEEAEKVVKMASGESGSEAASPVAVSAWMSFLGACKTHNDWGRAAGAAEKL 902
Query: 529 LTLNPGSTGNYILMANLFT 547
L+P + Y+L++ ++
Sbjct: 903 YELDPEDSAPYVLLSQTYS 921
Score = 214 bits (546), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 133/473 (28%), Positives = 237/473 (50%), Gaps = 27/473 (5%)
Query: 32 TFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEM 91
TF VL ACA + + GK+VH + + + D +Q L+++Y+KC D SR++ + M
Sbjct: 1 TFACVLSACAGLKDMERGKKVHRRIRESVARVDTVLQNALLNLYAKCGDLEESRRIFEAM 60
Query: 92 PVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGC----SFRQ 147
R+V +WN++I+A+ + EA+ + M S+ TF SV+ C
Sbjct: 61 --ERRTVATWNTMITAYVQHDFFQEALEAFRRM---DAPPSSITFTSVLGACCSPDDLET 115
Query: 148 GISMHCCVYKLGLLNNEIP----LANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTII 203
G ++H ++G + +I L NS+++MY K G + +A +F I + SWT +I
Sbjct: 116 GKAIH---RQIGASSPQIQADEILQNSLVTMYGKCGSLEDAERVFHGIRRKNAFSWTAMI 172
Query: 204 GGYVNVG---NVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKS 260
Y G E FG + M V PD + + ++ C+ +G+L + +H+L+
Sbjct: 173 TAYAQNGYERRAIEVFG--DMMSEGRVEPDPITYAGVLTACSTLGDLETGMRIHALIRSK 230
Query: 261 GYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLF 320
G + + L+ +Y K G E A +VF++V ++ V +WT+ I G A+ LF
Sbjct: 231 GVESA-MVSTGLIDLYGKWGFFEDALQVFESVRDRDVVIWTAFIAACVYHGQSGFALELF 289
Query: 321 KRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKC 380
+++ ++ N T + L+AC+ L GK IE+ I GLE + +Q ++ + ++C
Sbjct: 290 RKMEAEGLQANNVTFSKILAACSNLEDFETGKTIEDRIYTLGLEYDDVLQDGILSLHARC 349
Query: 381 GRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSI 440
G + +E+F+R+P + + W+ MI Y G +AL L++ M ++PD + +++
Sbjct: 350 GSLVGTREMFDRMPHRTVVTWTTMIAAYNQRGYSMEALELYHCMD----IEPDDIALSNV 405
Query: 441 LSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTI 493
L ACS ++ G + + S EPS+ LVD+ + G A +T
Sbjct: 406 LQACSRLKNLEQGRAVHSRIASR-DFEPSLMVQTLLVDMYVKCGDLAEARRTF 457
Score = 213 bits (543), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 124/479 (25%), Positives = 249/479 (51%), Gaps = 15/479 (3%)
Query: 15 LSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDM 74
L + M G+ N+ TF +L AC+N+ GK + + +G + D +Q G++ +
Sbjct: 286 LELFRKMEAEGLQANNVTFSKILAACSNLEDFETGKTIEDRIYTLGLEYDDVLQDGILSL 345
Query: 75 YSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSAS 134
+++C V +R++ D MP R+VV+W ++I+A+++ + EA+ + M + +++ S
Sbjct: 346 HARCGSLVGTREMFDRMP--HRTVVTWTTMIAAYNQRGYSMEALELYHCMDIEPDDIALS 403
Query: 135 TFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDE 190
+V+ CS QG ++H + + + ++ MY K G + EAR FD
Sbjct: 404 ---NVLQACSRLKNLEQGRAVHSRIASRDF-EPSLMVQTLLVDMYVKCGDLAEARRTFDG 459
Query: 191 IGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLA 250
++SWT++I Y + EA + + M V P+ + F +I C+++ +L
Sbjct: 460 FKARDVISWTSLITAYSHENFGREALEVFHSMELEGVEPNSITFCTVIDACSRLSSLLPG 519
Query: 251 LSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQL 310
++HS ++ +G+ +++ + N LVSMY+K G ++ AR VFD++ K W M+ Q
Sbjct: 520 RALHSRVVATGHISDEFVGNALVSMYSKFGRVDFARVVFDSIPVKRYPSWRVMLVALTQN 579
Query: 311 GYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQ 370
G+ EA+ ++ R+ RP + L +C L +S+ + I I + + +
Sbjct: 580 GHSHEALEMYSRIHLEGFRPGSPIFSAALVSCTALEDVSRARAIHGVIKSSDFYPDLVLS 639
Query: 371 TSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGL 430
L+++++KCG + +A+ VF+++ +K+ W+ MI GYA +G +AL L+ M +
Sbjct: 640 NVLMNVYAKCGELEEARLVFDQMTEKNEVSWTTMIGGYAQNGRPAEALELYKAMD----V 695
Query: 431 KPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLA 489
+P+ + + ++S+C+ G + +G + S+ G++ + LV++ + G+ LA
Sbjct: 696 QPNFIAFVPVISSCADLGALVEGQRVHARL-SDAGLQNNEVIVTALVNMYAKCGKLGLA 753
Score = 210 bits (535), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 137/544 (25%), Positives = 257/544 (47%), Gaps = 22/544 (4%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHV--LK 58
MI + F+E L + M +S TF VL AC + + + GK +H +
Sbjct: 71 MITAYVQHDFFQEALEAFRRM---DAPPSSITFTSVLGACCSPDDLETGKAIHRQIGASS 127
Query: 59 VGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAI 118
Q D +Q L+ MY KC + +V +R ++ SW ++I+A+++ AI
Sbjct: 128 PQIQADEILQNSLVTMYGKCGSLEDAERVFH--GIRRKNAFSWTAMITAYAQNGYERRAI 185
Query: 119 LVLKEMWVLG-LELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMS 173
V +M G +E T+ V++ CS G+ +H + G+ + + + ++
Sbjct: 186 EVFGDMMSEGRVEPDPITYAGVLTACSTLGDLETGMRIHALIRSKGVESAMV--STGLID 243
Query: 174 MYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVV 233
+Y K+G +A +F+ + + +V WT I V G A L +M + + V
Sbjct: 244 LYGKWGFFEDALQVFESVRDRDVVIWTAFIAACVYHGQSGFALELFRKMEAEGLQANNVT 303
Query: 234 FLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVL 293
F ++ C+ + + ++ + G +D L + ++S++ +CG L R +FD +
Sbjct: 304 FSKILAACSNLEDFETGKTIEDRIYTLGLEYDDVLQDGILSLHARCGSLVGTREMFDRMP 363
Query: 294 EKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKE 353
++V WT+MI Y Q GY EA+ L+ + + P++ L+ L AC+ L +L +G+
Sbjct: 364 HRTVVTWTTMIAAYNQRGYSMEALELYHCM---DIEPDDIALSNVLQACSRLKNLEQGRA 420
Query: 354 IEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGM 413
+ I E + VQT L+ M+ KCG + +A+ F+ +D+ W+++I Y+
Sbjct: 421 VHSRIASRDFEPSLMVQTLLVDMYVKCGDLAEARRTFDGFKARDVISWTSLITAYSHENF 480
Query: 414 GDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHY 473
G +AL +F+ M+ +EG++P+++ + +++ ACS + G + + + I
Sbjct: 481 GREALEVFHSME-LEGVEPNSITFCTVIDACSRLSSLLPGRALHSRVVATGHISDEFVGN 539
Query: 474 LCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMK--HHNVELGEYAAKNLLTL 531
LV + + GR D A +PV+ + W +L A + H + L Y+ +L
Sbjct: 540 -ALVSMYSKFGRVDFARVVFDSIPVK-RYPSWRVMLVALTQNGHSHEALEMYSRIHLEGF 597
Query: 532 NPGS 535
PGS
Sbjct: 598 RPGS 601
>gi|224124386|ref|XP_002330010.1| predicted protein [Populus trichocarpa]
gi|222871435|gb|EEF08566.1| predicted protein [Populus trichocarpa]
Length = 677
Score = 330 bits (846), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 188/575 (32%), Positives = 308/575 (53%), Gaps = 43/575 (7%)
Query: 50 KRVHSHVL-KVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAH 108
K++HS +L + + L+ Y+ C + +R + DE + ++VV +N +I ++
Sbjct: 55 KKLHSKILIDQNLHPNPSLGIKLMRAYAACGEPCYTRHIFDE--ITDKNVVFFNVMIRSY 112
Query: 109 SRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCSFRQ----GISMHCCVYKLGLLNNE 164
L +A+LV K M G T+ V+ CS G+ +H V KLGL N
Sbjct: 113 VNNGLYQDALLVFKTMANQGFYPDNYTYPCVLKACSVSGNLWVGLQIHGAVVKLGLDMN- 171
Query: 165 IPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRR 224
+ + N ++SMY K ++ AR + DE+ +VSW +++ GY G N+A LC +M
Sbjct: 172 LYIGNGLVSMYGKCKWLDAARRVLDEMPGRDMVSWNSMVAGYAQNGRFNDALKLCREMED 231
Query: 225 MSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLEL 284
+ + PD +G+L A++ T C ++
Sbjct: 232 LKLKPD----------AGTMGSLLPAVT-----------------------NTSCDNVLY 258
Query: 285 ARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAE 344
+ +F + EKS+ W MI Y P+EAV+L+ ++ V P+ ++++ L AC +
Sbjct: 259 VKDMFVKLKEKSLISWNVMIAVYVNNAMPNEAVDLYLQMQVHGVEPDAVSISSVLPACGD 318
Query: 345 LGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAM 404
L + G+ I EY+ L N ++ +LI M++KCG + +A+ VF+++ +D+ W++M
Sbjct: 319 LSAAVLGRRIHEYVERKKLRPNLLLENALIDMYAKCGCLKEARAVFDQMMFRDVVSWTSM 378
Query: 405 INGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNF 464
I+ Y + G G A+ LF KM+ G PD + + S+L+ACSH+G+VD+G F M + +
Sbjct: 379 ISAYGMSGQGKDAVALFKKMRD-SGFTPDWIAFVSVLAACSHAGLVDEGRYCFNLM-AEY 436
Query: 465 GIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYA 524
GI P IEHY C+VDLLGRAG+ D A +MP+E +VW LLSAC + ++ + A
Sbjct: 437 GITPGIEHYNCMVDLLGRAGKIDEAYHLTRQMPMEPNERVWGSLLSACRVYSSMNIALLA 496
Query: 525 AKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQV 584
A +L L P +G Y+L++N++ AG W++ T R +M+ + + K PG S VEI+ V
Sbjct: 497 ADHLFQLAPEQSGYYVLLSNIYAKAGRWQDVETVRSIMNSKGIKKIPGNSNVEINDHVYT 556
Query: 585 FVAGDRSHHLSVDIRKTLKELHIKLLEAGYIAEAD 619
F+AGD+SH S +I K L L ++ E GY+ E D
Sbjct: 557 FLAGDQSHTQSKEIYKALGVLVGRMKELGYMPETD 591
Score = 197 bits (502), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 121/443 (27%), Positives = 220/443 (49%), Gaps = 36/443 (8%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MIR+ NNG +++ L + +M G + +++T+P VLKAC+ ++W G ++H V+K+G
Sbjct: 108 MIRSYVNNGLYQDALLVFKTMANQGFYPDNYTYPCVLKACSVSGNLWVGLQIHGAVVKLG 167
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+ ++ GL+ MY KC ++R+VLDEMP R +VSWNS+++ +++ ++A+ +
Sbjct: 168 LDMNLYIGNGLVSMYGKCKWLDAARRVLDEMPG--RDMVSWNSMVAGYAQNGRFNDALKL 225
Query: 121 LKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGK 180
+EM L L+ A T S++ + + C
Sbjct: 226 CREMEDLKLKPDAGTMGSLLPAVT-----NTSC-------------------------DN 255
Query: 181 VNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILG 240
V + +F ++ E S++SW +I YVN NEA L QM+ V PD V +++
Sbjct: 256 VLYVKDMFVKLKEKSLISWNVMIAVYVNNAMPNEAVDLYLQMQVHGVEPDAVSISSVLPA 315
Query: 241 CAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLW 300
C + L +H + + L+N L+ MY KCG L+ AR VFD ++ + V W
Sbjct: 316 CGDLSAAVLGRRIHEYVERKKLRPNLLLENALIDMYAKCGCLKEARAVFDQMMFRDVVSW 375
Query: 301 TSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVL 360
TSMI Y G +AV LFK++ + P+ + L+AC+ G + +G+ +
Sbjct: 376 TSMISAYGMSGQGKDAVALFKKMRDSGFTPDWIAFVSVLAACSHAGLVDEGRYCFNLMAE 435
Query: 361 NGLESNRQVQTSLIHMFSKCGRINKAKEVFERVP-DKDLAVWSAMINGYAIHGMGDQALN 419
G+ + ++ + + G+I++A + ++P + + VW ++++ ++ + AL
Sbjct: 436 YGITPGIEHYNCMVDLLGRAGKIDEAYHLTRQMPMEPNERVWGSLLSACRVYSSMNIAL- 494
Query: 420 LFYKMQHVEGLKPDAVVYTSILS 442
H+ L P+ Y +LS
Sbjct: 495 --LAADHLFQLAPEQSGYYVLLS 515
>gi|297819542|ref|XP_002877654.1| hypothetical protein ARALYDRAFT_323502 [Arabidopsis lyrata subsp.
lyrata]
gi|297323492|gb|EFH53913.1| hypothetical protein ARALYDRAFT_323502 [Arabidopsis lyrata subsp.
lyrata]
Length = 1112
Score = 330 bits (846), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 204/626 (32%), Positives = 332/626 (53%), Gaps = 17/626 (2%)
Query: 7 NNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG-FQQDA 65
NNG + + + L+ G+ N + + V++AC+N + + G+ + ++K G F+ D
Sbjct: 143 NNGREFDAIKLFVEFLEMGLVPNDYCYTAVIRACSNSDFVGVGRVILGFLMKTGHFESDV 202
Query: 66 FVQTGLIDMYSKCSD-FVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEM 124
V LIDM+ K + F ++ KV D+M +VV+W +I+ + EAI +M
Sbjct: 203 CVGCSLIDMFVKGENSFENAYKVFDKMSEL--NVVTWTLMITRCMQMGFPREAIRFFLDM 260
Query: 125 WVLGLELSASTFVSVVSGCSFRQGISM----HCCVYKLGLLNNEIPLANSVMSMYAKF-- 178
+ G E T SV S C+ + +S+ H + GL ++ + S++ MYAK
Sbjct: 261 VLSGFESDKFTLSSVFSACAELENLSLGRQLHSWAIRSGLADD---VECSLVDMYAKCSA 317
Query: 179 -GKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNV-NEAFGLCNQM-RRMSVTPDLVVFL 235
G V++ R +FD + + S++SWT +I GY+ N+ EA L ++M + V P+ F
Sbjct: 318 DGSVDDCRKVFDRMQDHSVMSWTALITGYMQNCNLATEAINLFSEMITQGHVEPNHFTFS 377
Query: 236 NLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEK 295
+ C V + + + K G + + N ++SM+ KC +E AR F+++ EK
Sbjct: 378 SAFKACGNVSDPRVGKQVLGHAFKRGLASNSSVSNSVISMFVKCDRMEDARTAFESLSEK 437
Query: 296 SVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIE 355
++ + + + G + A L + + + + T A+ LS A +GSL KG++I
Sbjct: 438 NLVSYNTFLDGTCRNLDFEHAFELLSEIAERELGVSAFTFASLLSGVANVGSLRKGEQIH 497
Query: 356 EYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGD 415
++ GL N+ V +LI M+SKCG I+ A VF + ++++ W++MI G+A HG +
Sbjct: 498 SQVLKLGLSCNQPVCNALISMYSKCGSIDTASRVFSLMDNRNVISWTSMITGFAKHGFAE 557
Query: 416 QALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLC 475
+ L F +M EG+KP+ V Y +ILSACSH G+V +G F SM + I+P +EHY C
Sbjct: 558 RVLETFNQMTK-EGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYAC 616
Query: 476 LVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGS 535
+VDLL RAG A + I+ MP + VW L AC H N ELG+ AA+ +L +P
Sbjct: 617 MVDLLCRAGLLTDAFEFINTMPFQADVLVWRTFLGACRVHSNTELGKLAARKILEFDPNE 676
Query: 536 TGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLS 595
YI ++N++ SAG W+E+ R M +R L KE G S +E+ V F GD SH +
Sbjct: 677 PAAYIQLSNIYASAGKWEESTEMRRKMKERNLVKEGGCSWIEVGDKVHKFYVGDTSHPNA 736
Query: 596 VDIRKTLKELHIKLLEAGYIAEADIV 621
I L L ++ GY+ + D+V
Sbjct: 737 HQIYDELDWLITEIKRCGYVPDTDLV 762
Score = 165 bits (418), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 140/533 (26%), Positives = 244/533 (45%), Gaps = 21/533 (3%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHG-NSFTFPLVLKACANINSIWDGKRVHSHVLKV 59
+I N G +S M + G+ +S TF +LK+C GK VH+ +++
Sbjct: 32 LILRHLNAGDLRGAVSALDLMARDGIRPMDSVTFSSLLKSCIRARHFRLGKLVHARLIEF 91
Query: 60 GFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEM-PVRLRSVVSWNSIISAHSRACLNDEAI 118
+ D+ + LI +YSK D ++ V + M R VVSW+++++ +AI
Sbjct: 92 EIEPDSVLYNSLISLYSKSGDLTKAKDVFETMGRFGKRDVVSWSAMMACFGNNGREFDAI 151
Query: 119 LVLKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCV----YKLGLLNNEIPLANSVMSM 174
+ E +GL + + +V+ CS + + + K G +++ + S++ M
Sbjct: 152 KLFVEFLEMGLVPNDYCYTAVIRACSNSDFVGVGRVILGFLMKTGHFESDVCVGCSLIDM 211
Query: 175 YAKFGKVNE-ARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVV 233
+ K E A +FD++ E ++V+WT +I + +G EA M D
Sbjct: 212 FVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFT 271
Query: 234 FLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKC---GDLELARRVFD 290
++ CA++ NL L +HS ++SG D ++ LV MY KC G ++ R+VFD
Sbjct: 272 LSSVFSACAELENLSLGRQLHSWAIRSGL--ADDVECSLVDMYAKCSADGSVDDCRKVFD 329
Query: 291 AVLEKSVFLWTSMIGGYAQ-LGYPSEAVNLFKRLL-KTSVRPNEATLATTLSACAELGSL 348
+ + SV WT++I GY Q +EA+NLF ++ + V PN T ++ AC +
Sbjct: 330 RMQDHSVMSWTALITGYMQNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNVSDP 389
Query: 349 SKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGY 408
GK++ + GL SN V S+I MF KC R+ A+ FE + +K+L ++ ++G
Sbjct: 390 RVGKQVLGHAFKRGLASNSSVSNSVISMFVKCDRMEDARTAFESLSEKNLVSYNTFLDGT 449
Query: 409 AIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEP 468
+ + A L ++ E L A + S+LS ++ G + G S G+
Sbjct: 450 CRNLDFEHAFELLSEIAERE-LGVSAFTFASLLSGVANVGSLRKGEQ-IHSQVLKLGL-- 505
Query: 469 SIEHYLC--LVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVE 519
S +C L+ + + G D A + M W +++ KH E
Sbjct: 506 SCNQPVCNALISMYSKCGSIDTASRVFSLMD-NRNVISWTSMITGFAKHGFAE 557
>gi|125558027|gb|EAZ03563.1| hypothetical protein OsI_25699 [Oryza sativa Indica Group]
Length = 528
Score = 330 bits (846), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 172/439 (39%), Positives = 259/439 (58%), Gaps = 8/439 (1%)
Query: 183 EARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQM--RRMSVTPDLVVFLNLILG 240
+AR FDEI + + V T + GYV V + L M + D L
Sbjct: 2 DARRAFDEIPDPNPVIVTAMASGYVRNNLVYHSLELFRAMIASDSASVVDEAAALVAFSA 61
Query: 241 CAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCG--DLELARRVFDAVLEKSVF 298
A+V + + S+H+L+ K G+ + N ++ Y K G DLE+AR+VFD +E+ V
Sbjct: 62 SARVPDRGVTASLHALIAKIGFERNAGVVNTMLDSYAKGGSRDLEVARKVFD-TMERDVV 120
Query: 299 LWTSMIGGYAQLGYPSEAVNLFKRLLKTS--VRPNEATLATTLSACAELGSLSKGKEIEE 356
W SMI YAQ G +EA+ L+ ++L ++ N L+ L ACA G++ GK I
Sbjct: 121 SWNSMIALYAQNGMSAEAIGLYSKMLNVGGGIKCNAVALSAVLLACAHAGAIQTGKHIHN 180
Query: 357 YIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQ 416
+V GLE N V TS++ M+SKCGR+ A F ++ +K++ WSAMI GY +HG G +
Sbjct: 181 QVVRMGLEENVYVGTSIVDMYSKCGRVEMASRAFRKIKEKNILSWSAMITGYGMHGRGQE 240
Query: 417 ALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCL 476
AL +F +M+ GL+P+ + + S+L+ACSH+G++D+G ++ +M+ FGIE +EHY C+
Sbjct: 241 ALEIFTEMKR-SGLRPNYITFISVLAACSHAGLLDEGRYWYNAMKQEFGIEAGVEHYGCM 299
Query: 477 VDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGST 536
VDLLGRAG D A I EM V+ A +W LLSAC H NVEL E + K L L+ ++
Sbjct: 300 VDLLGRAGCLDEAYSLIKEMKVKPDAAIWGALLSACRIHKNVELAEMSVKRLFELDASNS 359
Query: 537 GNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSV 596
G Y+L++N++ AGMWK+ R L+ RR+ K PG+S E+ G + +F GD+SH +
Sbjct: 360 GYYVLLSNIYAEAGMWKDVERIRLLVKTRRIEKPPGYSSFELKGKIYLFYVGDKSHPQHI 419
Query: 597 DIRKTLKELHIKLLEAGYI 615
+I L++L ++ EAGY+
Sbjct: 420 EIYSYLEKLLERMQEAGYV 438
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 96/359 (26%), Positives = 167/359 (46%), Gaps = 65/359 (18%)
Query: 52 VHSHVLKVGFQQDAFVQTGLIDMYSK--CSDFVSSRKVLDEMPVRLRSVVSWNSIISAHS 109
+H+ + K+GF+++A V ++D Y+K D +RKV D M R VVSWNS+I+ ++
Sbjct: 74 LHALIAKIGFERNAGVVNTMLDSYAKGGSRDLEVARKVFDTME---RDVVSWNSMIALYA 130
Query: 110 RACLNDEAILVLKEMWVLG--LELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNN 163
+ ++ EAI + +M +G ++ +A +V+ C+ + G +H V ++GL N
Sbjct: 131 QNGMSAEAIGLYSKMLNVGGGIKCNAVALSAVLLACAHAGAIQTGKHIHNQVVRMGLEEN 190
Query: 164 EIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMR 223
+ + S++ MY+K G+V A F +I E +I+SW+ +I GY G EA + +M+
Sbjct: 191 -VYVGTSIVDMYSKCGRVEMASRAFRKIKEKNILSWSAMITGYGMHGRGQEALEIFTEMK 249
Query: 224 RMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSG---YNNEDPLDNLLVSMYTKCG 280
R + P+ + F++++ C+ G LL G YN +M + G
Sbjct: 250 RSGLRPNYITFISVLAACSHAG-----------LLDEGRYWYN----------AMKQEFG 288
Query: 281 DLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLS 340
+E V + M+ + G EA +L K + V+P+ A LS
Sbjct: 289 ------------IEAGVEHYGCMVDLLGRAGCLDEAYSLIKEM---KVKPDAAIWGALLS 333
Query: 341 AC-----AELGSLSKGKEIE-------EYIVLNGL--ESNRQVQTSLIHMFSKCGRINK 385
AC EL +S + E Y++L+ + E+ I + K RI K
Sbjct: 334 ACRIHKNVELAEMSVKRLFELDASNSGYYVLLSNIYAEAGMWKDVERIRLLVKTRRIEK 392
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 116/252 (46%), Gaps = 34/252 (13%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTG--VHGNSFTFPLVLKACANINSIWDGKRVHSHVLK 58
MI NG E + YS ML G + N+ VL ACA+ +I GK +H+ V++
Sbjct: 125 MIALYAQNGMSAEAIGLYSKMLNVGGGIKCNAVALSAVLLACAHAGAIQTGKHIHNQVVR 184
Query: 59 VGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAI 118
+G +++ +V T ++DMYSKC + + + ++ ++++SW+++I+ + EA+
Sbjct: 185 MGLEENVYVGTSIVDMYSKCGRVEMASRAFRK--IKEKNILSWSAMITGYGMHGRGQEAL 242
Query: 119 LVLKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKF 178
+ EM GL + TF+SV++ CS GLL+ N++ +
Sbjct: 243 EIFTEMKRSGLRPNYITFISVLAACS------------HAGLLDEGRYWYNAMKQEFGIE 290
Query: 179 GKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLI 238
V + D +G G ++EA+ L +M+ V PD ++ L+
Sbjct: 291 AGVEHYGCMVDLLGRA---------------GCLDEAYSLIKEMK---VKPDAAIWGALL 332
Query: 239 LGCAQVGNLFLA 250
C N+ LA
Sbjct: 333 SACRIHKNVELA 344
>gi|413935694|gb|AFW70245.1| hypothetical protein ZEAMMB73_875976 [Zea mays]
Length = 807
Score = 330 bits (846), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 200/661 (30%), Positives = 331/661 (50%), Gaps = 83/661 (12%)
Query: 8 NGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFV 67
+GS E L Y MLQ G+ +FT VL AC + ++ DG+R H +KVG FV
Sbjct: 120 SGSPGEALEMYQGMLQEGLAPTNFTLASVLSACGAVAALDDGRRCHGLAVKVGLDGHQFV 179
Query: 68 QTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVL 127
+ GL+ MY+KC + ++ D MP + VS+ +++ ++ D+A+ + M
Sbjct: 180 ENGLLGMYTKCGSVADAVRLFDGMPS--PNEVSFTAMMGGLAQGGAVDDALRLFARMSRT 237
Query: 128 GLELSASTFVSVVSGC------------SFRQGISMHCCVYKLGLLNNEIPLANSVMSMY 175
G+ + SV+ C + + S+H V + G +++ + NS++ +Y
Sbjct: 238 GIRVDPVAVSSVLGACAQACAGDYNVARAIQLAQSIHALVVRKGFGSDQ-HVGNSLVDLY 296
Query: 176 AKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFL 235
AK K++EA +F+ + SIVSW +I GY +G A + M+ P+ V +
Sbjct: 297 AKGMKMDEAIKVFESLSSVSIVSWNILITGYGQLGCYERAMEVLEFMQESGFEPNEVTYS 356
Query: 236 NLILGCAQVGNLFLALSMHSLLLK----------SGYNNED------------------P 267
N++ C + ++ A +M + K SGY E+ P
Sbjct: 357 NMLASCIKARDVPSARAMFDKIPKPSVTTWNTLLSGYGQEELHQETIDLFRRMQHQNVQP 416
Query: 268 LDNLLVSMYTKC---GDLELARRV-----------------------------------F 289
L + + C G+ EL ++V F
Sbjct: 417 DRTTLAVILSSCSRLGNFELGKQVHSASVRLLLHNDMFVASGLIDIYSKCGQVGIALIIF 476
Query: 290 DAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLS 349
+ + E+ V W SMI G A EA + K++ + + P E++ A+ ++ CA L S+
Sbjct: 477 NMMTERDVVCWNSMISGLAIHSLSEEAFDFLKQMRENGMFPTESSYASMINLCARLSSIP 536
Query: 350 KGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYA 409
+G+++ ++ +G + N V SLI M++K G ++ A+ F + K+L W+ MI+GYA
Sbjct: 537 QGRQMHAQVLKDGYDQNVYVGCSLIDMYAKSGNMDDARLFFNCMIVKNLVAWNEMIHGYA 596
Query: 410 IHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPS 469
+G G++A+ LF M + KPD+V + ++L+ CSHSG+VD+ ++FF SM+SN+GI P
Sbjct: 597 QNGFGEKAVELFEYMLTTK-QKPDSVTFIAVLTGCSHSGLVDEAVTFFNSMESNYGITPL 655
Query: 470 IEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLL 529
+EHY CL+D L RA RF I +MP + +W LL+AC+ HHN ELGE++AK+L
Sbjct: 656 VEHYTCLIDALARAARFAEVEAVIGKMPYKDDPILWEVLLAACVVHHNAELGEFSAKHLF 715
Query: 530 TLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQV-EIDGSVQVFVAG 588
L+P + Y+L++N++ + G +A+ R LM R + K G+S V DGS VA
Sbjct: 716 RLDPKNPSPYVLLSNIYATLGRHGDASAVRALMSSRGVVKGRGYSWVNHKDGSRAFMVAD 775
Query: 589 D 589
D
Sbjct: 776 D 776
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 126/511 (24%), Positives = 227/511 (44%), Gaps = 84/511 (16%)
Query: 48 DGKRVHSHVLKVGFQQDAFVQTGLIDMYS------------------------------- 76
+ K H+ VL G D F+ L+++YS
Sbjct: 28 NAKAAHARVLAAGLAADTFLLNRLVELYSLSGLPCHALRAFRALPHPNVYSYNAAISAAC 87
Query: 77 KCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTF 136
+ D ++R +L MP R + VSWN++I+A +R+ EA+ + + M GL + T
Sbjct: 88 RAGDLAAARDLLGRMPDR--NAVSWNTVIAAVARSGSPGEALEMYQGMLQEGLAPTNFTL 145
Query: 137 VSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIG 192
SV+S C + G H K+GL ++ + N ++ MY K G V +A +FD +
Sbjct: 146 ASVLSACGAVAALDDGRRCHGLAVKVGLDGHQF-VENGLLGMYTKCGSVADAVRLFDGMP 204
Query: 193 ETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQ--VGN---- 246
+ VS+T ++GG G V++A L +M R + D V +++ CAQ G+
Sbjct: 205 SPNEVSFTAMMGGLAQGGAVDDALRLFARMSRTGIRVDPVAVSSVLGACAQACAGDYNVA 264
Query: 247 --LFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMI 304
+ LA S+H+L+++ G+ ++ + N LV +Y K ++ A +VF+++ S+ W +I
Sbjct: 265 RAIQLAQSIHALVVRKGFGSDQHVGNSLVDLYAKGMKMDEAIKVFESLSSVSIVSWNILI 324
Query: 305 GGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLE 364
GY QLG A+ + + + ++ PNE T + L++C
Sbjct: 325 TGYGQLGCYERAMEVLEFMQESGFEPNEVTYSNMLASCI--------------------- 363
Query: 365 SNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKM 424
K + A+ +F+++P + W+ +++GY + + ++LF +M
Sbjct: 364 --------------KARDVPSARAMFDKIPKPSVTTWNTLLSGYGQEELHQETIDLFRRM 409
Query: 425 QHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAG 484
QH + ++PD ILS+CS G + G S + + L+D+ + G
Sbjct: 410 QH-QNVQPDRTTLAVILSSCSRLGNFELGKQ-VHSASVRLLLHNDMFVASGLIDIYSKCG 467
Query: 485 RFDLALKTIHEMPVEVQAQVWAPLLSACMKH 515
+ +AL I M E W ++S H
Sbjct: 468 QVGIAL-IIFNMMTERDVVCWNSMISGLAIH 497
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 95/366 (25%), Positives = 178/366 (48%), Gaps = 19/366 (5%)
Query: 169 NSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVT 228
N+ +S + G + AR + + + + VSW T+I G+ EA + M + +
Sbjct: 80 NAAISAACRAGDLAAARDLLGRMPDRNAVSWNTVIAAVARSGSPGEALEMYQGMLQEGLA 139
Query: 229 PDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRV 288
P +++ C V L H L +K G + ++N L+ MYTKCG + A R+
Sbjct: 140 PTNFTLASVLSACGAVAALDDGRRCHGLAVKVGLDGHQFVENGLLGMYTKCGSVADAVRL 199
Query: 289 FDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAE---- 344
FD + + +T+M+GG AQ G +A+ LF R+ +T +R + +++ L ACA+
Sbjct: 200 FDGMPSPNEVSFTAMMGGLAQGGAVDDALRLFARMSRTGIRVDPVAVSSVLGACAQACAG 259
Query: 345 ----LGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAV 400
++ + I +V G S++ V SL+ +++K ++++A +VFE + +
Sbjct: 260 DYNVARAIQLAQSIHALVVRKGFGSDQHVGNSLVDLYAKGMKMDEAIKVFESLSSVSIVS 319
Query: 401 WSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSM 460
W+ +I GY G ++A+ + MQ G +P+ V Y+++L++C + V + F +
Sbjct: 320 WNILITGYGQLGCYERAMEVLEFMQE-SGFEPNEVTYSNMLASCIKARDVPSARAMFDKI 378
Query: 461 QSNFGIEPSIEHYLCLVDLLGR----AGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHH 516
+PS+ + L+ G+ DL + H+ V+ A +LS+C +
Sbjct: 379 P-----KPSVTTWNTLLSGYGQEELHQETIDLFRRMQHQ-NVQPDRTTLAVILSSCSRLG 432
Query: 517 NVELGE 522
N ELG+
Sbjct: 433 NFELGK 438
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 81/306 (26%), Positives = 146/306 (47%), Gaps = 21/306 (6%)
Query: 270 NLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVR 329
N +S + GDL AR + + +++ W ++I A+ G P EA+ +++ +L+ +
Sbjct: 80 NAAISAACRAGDLAAARDLLGRMPDRNAVSWNTVIAAVARSGSPGEALEMYQGMLQEGLA 139
Query: 330 PNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEV 389
P TLA+ LSAC + +L G+ V GL+ ++ V+ L+ M++KCG + A +
Sbjct: 140 PTNFTLASVLSACGAVAALDDGRRCHGLAVKVGLDGHQFVENGLLGMYTKCGSVADAVRL 199
Query: 390 FERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGM 449
F+ +P + ++AM+ G A G D AL LF +M G++ D V +S+L AC+ +
Sbjct: 200 FDGMPSPNEVSFTAMMGGLAQGGAVDDALRLFARMSRT-GIRVDPVAVSSVLGACAQACA 258
Query: 450 VD----DGLSFFKSMQS-----NFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEV 500
D + +S+ + FG + + + LVDL + + D A+K + V
Sbjct: 259 GDYNVARAIQLAQSIHALVVRKGFGSDQHVGN--SLVDLYAKGMKMDEAIKVFESLS-SV 315
Query: 501 QAQVWAPLLSACMKHHNVELGEYA-AKNLLTL--NPGSTGNYILMANLFTSAGMWKEAAT 557
W L++ +LG Y A +L G N + +N+ S ++ +
Sbjct: 316 SIVSWNILITG-----YGQLGCYERAMEVLEFMQESGFEPNEVTYSNMLASCIKARDVPS 370
Query: 558 ARGLMD 563
AR + D
Sbjct: 371 ARAMFD 376
>gi|357516843|ref|XP_003628710.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355522732|gb|AET03186.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 748
Score = 330 bits (846), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 199/653 (30%), Positives = 338/653 (51%), Gaps = 70/653 (10%)
Query: 36 VLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMP--- 92
+LK C ++ K +HSH++K + F+ LI Y+K + KV D+MP
Sbjct: 15 LLKLCCETHNFTKAKNLHSHIIKTLPYPETFLLNNLISSYAKLGSIPYACKVFDQMPHPN 74
Query: 93 --------------------------VRLRSVVSWNSIISAHSRACLNDEAI----LVLK 122
+ R VSWNS+IS ++ L +++ L+LK
Sbjct: 75 LYSWNTILSAYSKLGRVSEMEYLFDAMPRRDGVSWNSLISGYAGCGLIYQSVKAYNLMLK 134
Query: 123 EMWVLGL-ELSASTFVSVVS--GCSFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFG 179
L ++ ST + + S GC + G +H V K G ++ + + + ++ MY+K G
Sbjct: 135 NDGSFNLNRITFSTLLILASKRGC-VKLGRQIHGHVVKFGFMS-YVFVGSPLVDMYSKMG 192
Query: 180 KVNEARSIFDEIGETSIV-------------------------------SWTTIIGGYVN 208
++ AR +FDE+ E ++V SWT++I G+
Sbjct: 193 MISCARKVFDELPEKNVVMYNTLIMGLMRCGRVEDSKRLFFEMRERDSISWTSMITGFTQ 252
Query: 209 VGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPL 268
G +A + +M+ ++ D F +++ C V L +H+ ++++ Y + +
Sbjct: 253 NGLDRDAIDIFREMKLENLQMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYKDNIFV 312
Query: 269 DNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSV 328
+ LV MY KC +++ A VF + K+V WT+M+ GY Q GY EAV F + K +
Sbjct: 313 ASALVDMYCKCKNIKSAEAVFKKMTCKNVVSWTAMLVGYGQNGYSEEAVKTFSDMQKYGI 372
Query: 329 RPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKE 388
P++ TL + +S+CA L SL +G + + +GL S V +L+ ++ KCG I +
Sbjct: 373 EPDDFTLGSVISSCANLASLEEGAQFHARALTSGLISFITVSNALVTLYGKCGSIEDSHR 432
Query: 389 VFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSG 448
+F + KD W+A+++GYA G ++ + LF M GLKPD V + +LSACS +G
Sbjct: 433 LFNEISFKDEVTWTALVSGYAQFGKANETIGLFESML-AHGLKPDKVTFIGVLSACSRAG 491
Query: 449 MVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPL 508
+V+ G F+SM + GI P +HY C++DL RAGR + A I++MP A WA L
Sbjct: 492 LVEKGNQIFESMINEHGIVPIQDHYTCMIDLFSRAGRIEEARNFINKMPFSPDAISWATL 551
Query: 509 LSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLT 568
LS+C + N+++G++AA+ L+ L+P +T +Y+L+++++ + G W+E A R M D+ L
Sbjct: 552 LSSCRFYGNMDIGKWAAEFLMELDPHNTASYVLLSSVYAAKGKWEEVARLRKDMRDKGLR 611
Query: 569 KEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKELHIKLLEAGYIAEADIV 621
KEPG S ++ V VF A D+S+ S I L++L+ K+++ GY+ + + V
Sbjct: 612 KEPGCSWIKYKNQVHVFSADDKSNPFSDQIYSELEKLNYKMIKEGYVPDMNSV 664
Score = 148 bits (374), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 93/363 (25%), Positives = 175/363 (48%), Gaps = 40/363 (11%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI T NG + + + M + + +TF VL AC + ++ +GK+VH+++++
Sbjct: 246 MITGFTQNGLDRDAIDIFREMKLENLQMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTD 305
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
++ + FV + L+DMY KC + S+ V +M ++VVSW +++ + + ++EA+
Sbjct: 306 YKDNIFVASALVDMYCKCKNIKSAEAVFKKMTC--KNVVSWTAMLVGYGQNGYSEEAVKT 363
Query: 121 LKEMWVLGLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
+M G+E T SV+S C S +G H GL++ I ++N+++++Y
Sbjct: 364 FSDMQKYGIEPDDFTLGSVISSCANLASLEEGAQFHARALTSGLISF-ITVSNALVTLYG 422
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K G + ++ +F+EI V+WT ++ GY G NE GL M + PD V F+
Sbjct: 423 KCGSIEDSHRLFNEISFKDEVTWTALVSGYAQFGKANETIGLFESMLAHGLKPDKVTFIG 482
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
++ C++ G L++ G + + SM + G + +
Sbjct: 483 VLSACSRAG-----------LVEKG-------NQIFESMINEHGIVPIQDH--------- 515
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEE 356
+T MI +++ G EA N ++ P+ + AT LS+C G++ GK E
Sbjct: 516 ---YTCMIDLFSRAGRIEEARNFINKM---PFSPDAISWATLLSSCRFYGNMDIGKWAAE 569
Query: 357 YIV 359
+++
Sbjct: 570 FLM 572
>gi|413918610|gb|AFW58542.1| hypothetical protein ZEAMMB73_242801 [Zea mays]
Length = 941
Score = 330 bits (846), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 199/627 (31%), Positives = 329/627 (52%), Gaps = 13/627 (2%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
++ NG E L+ + M G NS+T VL+ CA + + G+ +H+ +LK G
Sbjct: 238 VVSGCVQNGRTLEALALFRGMQSAGFPMNSYTSVAVLQVCAELGLLSLGRELHAALLKCG 297
Query: 61 FQQDAFVQ-TGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAIL 119
+ + +Q L+ MY+K S+ +V ++ + +SWNS++S + + EAI
Sbjct: 298 SELN--IQCNALLVMYAKYGRVDSALRVFGQIAEK--DYISWNSMLSCYVQNSFYAEAID 353
Query: 120 VLKEMWVLGLELSASTFVSVVSG----CSFRQGISMHCCVYKLGLLNNEIPLANSVMSMY 175
EM G + + VS+ S G H K L+ ++ + N++M MY
Sbjct: 354 FFGEMLQHGFQPDHACVVSLSSALGHLSRLNNGREFHAYAIK-QRLHTDLQVGNTLMDMY 412
Query: 176 AKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFL 235
K G + + +F+ +G +SWTTI+ + +EA + ++++ + D ++
Sbjct: 413 IKCGSIECSAKVFESMGIRDHISWTTILACFAQSSRHSEALEMILELQKEGIMVDSMMIG 472
Query: 236 NLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEK 295
+++ C + ++ L +H +++G + L+N L+ +Y +CG+ + + +F V +K
Sbjct: 473 SILETCCGLKSISLLKQVHCYAIRNGLLDL-ILENRLIDIYGECGEFDHSLNLFQRVEKK 531
Query: 296 SVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIE 355
+ WTSMI G + AV LF + K +++P+ L + L A A L SL+KGK++
Sbjct: 532 DIVSWTSMINCCTNNGRLNGAVFLFTEMQKANIQPDSVALVSILVAIAGLSSLTKGKQVH 591
Query: 356 EYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGD 415
+++ V +SL+ M+S CG +N A VFER KD+ +W+AMIN +HG G
Sbjct: 592 GFLIRRNFPIEGPVVSSLVDMYSGCGSMNYAIRVFERAKCKDVVLWTAMINATGMHGHGK 651
Query: 416 QALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLC 475
QA++LF +M GL PD V + ++L ACSHS +V++G + M S + ++P EHY C
Sbjct: 652 QAIDLFKRMLQT-GLTPDHVSFLALLYACSHSKLVEEGKHYLDIMVSKYRLKPWQEHYAC 710
Query: 476 LVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGS 535
+VD+LGR+G+ + A + I MP++ ++ VW LL AC H N L AA LL L P +
Sbjct: 711 VVDILGRSGQTEEAYEFIKTMPMDPKSAVWCALLGACRVHRNYGLAVVAANKLLELEPDN 770
Query: 536 TGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLS 595
GNYIL++N+F G W A R M +R L K P S +EI ++ F +GD H S
Sbjct: 771 PGNYILVSNVFAEMGKWNNAKETRTRMAERGLRKNPACSWIEIGNNIHTFTSGDYCHRDS 830
Query: 596 VDIRKTLKELHIKL-LEAGYIAEADIV 621
I L E+ L E GY+ + V
Sbjct: 831 EAIHLKLSEITEMLRREGGYVEDTRFV 857
Score = 197 bits (501), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 140/519 (26%), Positives = 249/519 (47%), Gaps = 19/519 (3%)
Query: 7 NNGSFEETLSTYSSMLQTGVHGNS---FTFPLVLKACANINSIWDGKRVHSHVLKVGFQQ 63
++GS E + Y +M + G++ T VLKAC G VH +KVG +
Sbjct: 138 SSGSAGEAMRVYGAMRASAAPGSAPDGCTLASVLKACGAEGDGRCGGEVHGLAVKVGLDK 197
Query: 64 DAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKE 123
V LI MY+KC S+ +V + + R V SWNS++S + EA+ + +
Sbjct: 198 STLVANALIGMYAKCGLLDSALRVFEWLQQDARDVASWNSVVSGCVQNGRTLEALALFRG 257
Query: 124 MWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPL-ANSVMSMYAKF 178
M G +++ T V+V+ C+ G +H + K G +E+ + N+++ MYAK+
Sbjct: 258 MQSAGFPMNSYTSVAVLQVCAELGLLSLGRELHAALLKCG---SELNIQCNALLVMYAKY 314
Query: 179 GKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLI 238
G+V+ A +F +I E +SW +++ YV EA +M + PD ++L
Sbjct: 315 GRVDSALRVFGQIAEKDYISWNSMLSCYVQNSFYAEAIDFFGEMLQHGFQPDHACVVSLS 374
Query: 239 LGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVF 298
+ L H+ +K + + + N L+ MY KCG +E + +VF+++ +
Sbjct: 375 SALGHLSRLNNGREFHAYAIKQRLHTDLQVGNTLMDMYIKCGSIECSAKVFESMGIRDHI 434
Query: 299 LWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYI 358
WT+++ +AQ SEA+ + L K + + + + L C L S+S K++ Y
Sbjct: 435 SWTTILACFAQSSRHSEALEMILELQKEGIMVDSMMIGSILETCCGLKSISLLKQVHCYA 494
Query: 359 VLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQAL 418
+ NGL + ++ LI ++ +CG + + +F+RV KD+ W++MIN +G + A+
Sbjct: 495 IRNGL-LDLILENRLIDIYGECGEFDHSLNLFQRVEKKDIVSWTSMINCCTNNGRLNGAV 553
Query: 419 NLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSM-QSNFGIE-PSIEHYLCL 476
LF +MQ ++PD+V SIL A + + G + + NF IE P + L
Sbjct: 554 FLFTEMQKAN-IQPDSVALVSILVAIAGLSSLTKGKQVHGFLIRRNFPIEGPVVSS---L 609
Query: 477 VDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKH 515
VD+ G + A++ + +W +++A H
Sbjct: 610 VDMYSGCGSMNYAIRVFERAKCK-DVVLWTAMINATGMH 647
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 137/481 (28%), Positives = 236/481 (49%), Gaps = 28/481 (5%)
Query: 48 DGKRVHSHVLKVGF---QQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSI 104
+G++VH+H + G D F+ T L+ MY +C +R++ + MP R+V SWN++
Sbjct: 75 EGRQVHAHAVTTGSLNEDDDGFLATKLVFMYGRCGRVDDARRLFNGMPA--RTVFSWNAL 132
Query: 105 ISAHSRACLNDEAILVLKEMWVLGLELSAS---TFVSVVSGCSF----RQGISMHCCVYK 157
+ A+ + EA+ V M SA T SV+ C R G +H K
Sbjct: 133 VGAYLSSGSAGEAMRVYGAMRASAAPGSAPDGCTLASVLKACGAEGDGRCGGEVHGLAVK 192
Query: 158 LGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETS--IVSWTTIIGGYVNVGNVNEA 215
+G L+ +AN+++ MYAK G ++ A +F+ + + + + SW +++ G V G EA
Sbjct: 193 VG-LDKSTLVANALIGMYAKCGLLDSALRVFEWLQQDARDVASWNSVVSGCVQNGRTLEA 251
Query: 216 FGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSM 275
L M+ + + ++ CA++G L L +H+ LLK G + LLV M
Sbjct: 252 LALFRGMQSAGFPMNSYTSVAVLQVCAELGLLSLGRELHAALLKCGSELNIQCNALLV-M 310
Query: 276 YTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATL 335
Y K G ++ A RVF + EK W SM+ Y Q + +EA++ F +L+ +P+ A +
Sbjct: 311 YAKYGRVDSALRVFGQIAEKDYISWNSMLSCYVQNSFYAEAIDFFGEMLQHGFQPDHACV 370
Query: 336 ATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPD 395
+ SA L L+ G+E Y + L ++ QV +L+ M+ KCG I + +VFE +
Sbjct: 371 VSLSSALGHLSRLNNGREFHAYAIKQRLHTDLQVGNTLMDMYIKCGSIECSAKVFESMGI 430
Query: 396 KDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLS 455
+D W+ ++ +A +AL + ++Q EG+ D+++ SIL C G+ +S
Sbjct: 431 RDHISWTTILACFAQSSRHSEALEMILELQK-EGIMVDSMMIGSILETC--CGL--KSIS 485
Query: 456 FFKSMQSNFGIEPSIEHYLC---LVDLLGRAGRFDLALKTIHEMPVEVQAQV-WAPLLSA 511
K + + I + + L+D+ G G FD +L VE + V W +++
Sbjct: 486 LLKQVHC-YAIRNGLLDLILENRLIDIYGECGEFDHSLNLFQR--VEKKDIVSWTSMINC 542
Query: 512 C 512
C
Sbjct: 543 C 543
>gi|212275047|ref|NP_001130303.1| uncharacterized protein LOC100191397 [Zea mays]
gi|194688792|gb|ACF78480.1| unknown [Zea mays]
Length = 706
Score = 330 bits (845), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 200/661 (30%), Positives = 331/661 (50%), Gaps = 83/661 (12%)
Query: 8 NGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFV 67
+GS E L Y MLQ G+ +FT VL AC + ++ DG+R H +KVG FV
Sbjct: 19 SGSPGEALEMYQGMLQEGLAPTNFTLASVLSACGAVAALDDGRRCHGLAVKVGLDGHQFV 78
Query: 68 QTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVL 127
+ GL+ MY+KC + ++ D MP + VS+ +++ ++ D+A+ + M
Sbjct: 79 ENGLLGMYTKCGSVADAVRLFDGMPS--PNEVSFTAMMGGLAQGGAVDDALRLFARMSRT 136
Query: 128 GLELSASTFVSVVSGC------------SFRQGISMHCCVYKLGLLNNEIPLANSVMSMY 175
G+ + SV+ C + + S+H V + G +++ + NS++ +Y
Sbjct: 137 GIRVDPVAVSSVLGACAQACAGDYNVARAIQLAQSIHALVVRKGFGSDQ-HVGNSLVDLY 195
Query: 176 AKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFL 235
AK K++EA +F+ + SIVSW +I GY +G A + M+ P+ V +
Sbjct: 196 AKGMKMDEAIKVFESLSSVSIVSWNILITGYGQLGCYERAMEVLEFMQESGFEPNEVTYS 255
Query: 236 NLILGCAQVGNLFLALSMHSLLLK----------SGYNNED------------------P 267
N++ C + ++ A +M + K SGY E+ P
Sbjct: 256 NMLASCIKARDVPSARAMFDKIPKPSVTTWNTLLSGYGQEELHQETIDLFRRMQHQNVQP 315
Query: 268 LDNLLVSMYTKC---GDLELARRV-----------------------------------F 289
L + + C G+ EL ++V F
Sbjct: 316 DRTTLAVILSSCSRLGNFELGKQVHSASVRLLLHNDMFVASGLIDIYSKCGQVGIALIIF 375
Query: 290 DAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLS 349
+ + E+ V W SMI G A EA + K++ + + P E++ A+ ++ CA L S+
Sbjct: 376 NMMTERDVVCWNSMISGLAIHSLSEEAFDFLKQMRENGMFPTESSYASMINLCARLSSIP 435
Query: 350 KGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYA 409
+G+++ ++ +G + N V SLI M++K G ++ A+ F + K+L W+ MI+GYA
Sbjct: 436 QGRQMHAQVLKDGYDQNVYVGCSLIDMYAKSGNMDDARLFFNCMIVKNLVAWNEMIHGYA 495
Query: 410 IHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPS 469
+G G++A+ LF M + KPD+V + ++L+ CSHSG+VD+ ++FF SM+SN+GI P
Sbjct: 496 QNGFGEKAVELFEYMLTTK-QKPDSVTFIAVLTGCSHSGLVDEAVTFFNSMESNYGITPL 554
Query: 470 IEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLL 529
+EHY CL+D L RA RF I +MP + +W LL+AC+ HHN ELGE++AK+L
Sbjct: 555 VEHYTCLIDALARAARFAEVEAVIGKMPYKDDPILWEVLLAACVVHHNAELGEFSAKHLF 614
Query: 530 TLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQV-EIDGSVQVFVAG 588
L+P + Y+L++N++ + G +A+ R LM R + K G+S V DGS VA
Sbjct: 615 RLDPKNPSPYVLLSNIYATLGRHGDASAVRALMSSRGVVKGRGYSWVNHKDGSRAFMVAD 674
Query: 589 D 589
D
Sbjct: 675 D 675
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 111/432 (25%), Positives = 202/432 (46%), Gaps = 51/432 (11%)
Query: 96 RSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGC----SFRQGISM 151
R+ VSWN++I+A +R+ EA+ + + M GL + T SV+S C + G
Sbjct: 4 RNAVSWNTVIAAVARSGSPGEALEMYQGMLQEGLAPTNFTLASVLSACGAVAALDDGRRC 63
Query: 152 HCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGN 211
H K+GL ++ + N ++ MY K G V +A +FD + + VS+T ++GG G
Sbjct: 64 HGLAVKVGLDGHQF-VENGLLGMYTKCGSVADAVRLFDGMPSPNEVSFTAMMGGLAQGGA 122
Query: 212 VNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQ--VGN------LFLALSMHSLLLKSGYN 263
V++A L +M R + D V +++ CAQ G+ + LA S+H+L+++ G+
Sbjct: 123 VDDALRLFARMSRTGIRVDPVAVSSVLGACAQACAGDYNVARAIQLAQSIHALVVRKGFG 182
Query: 264 NEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRL 323
++ + N LV +Y K ++ A +VF+++ S+ W +I GY QLG A+ + + +
Sbjct: 183 SDQHVGNSLVDLYAKGMKMDEAIKVFESLSSVSIVSWNILITGYGQLGCYERAMEVLEFM 242
Query: 324 LKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRI 383
++ PNE T + L++C K +
Sbjct: 243 QESGFEPNEVTYSNMLASCI-----------------------------------KARDV 267
Query: 384 NKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSA 443
A+ +F+++P + W+ +++GY + + ++LF +MQH + ++PD ILS+
Sbjct: 268 PSARAMFDKIPKPSVTTWNTLLSGYGQEELHQETIDLFRRMQH-QNVQPDRTTLAVILSS 326
Query: 444 CSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQ 503
CS G + G S + + L+D+ + G+ +AL I M E
Sbjct: 327 CSRLGNFELGKQ-VHSASVRLLLHNDMFVASGLIDIYSKCGQVGIAL-IIFNMMTERDVV 384
Query: 504 VWAPLLSACMKH 515
W ++S H
Sbjct: 385 CWNSMISGLAIH 396
Score = 135 bits (340), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 90/342 (26%), Positives = 167/342 (48%), Gaps = 19/342 (5%)
Query: 193 ETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALS 252
+ + VSW T+I G+ EA + M + + P +++ C V L
Sbjct: 3 DRNAVSWNTVIAAVARSGSPGEALEMYQGMLQEGLAPTNFTLASVLSACGAVAALDDGRR 62
Query: 253 MHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGY 312
H L +K G + ++N L+ MYTKCG + A R+FD + + +T+M+GG AQ G
Sbjct: 63 CHGLAVKVGLDGHQFVENGLLGMYTKCGSVADAVRLFDGMPSPNEVSFTAMMGGLAQGGA 122
Query: 313 PSEAVNLFKRLLKTSVRPNEATLATTLSACAE--------LGSLSKGKEIEEYIVLNGLE 364
+A+ LF R+ +T +R + +++ L ACA+ ++ + I +V G
Sbjct: 123 VDDALRLFARMSRTGIRVDPVAVSSVLGACAQACAGDYNVARAIQLAQSIHALVVRKGFG 182
Query: 365 SNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKM 424
S++ V SL+ +++K ++++A +VFE + + W+ +I GY G ++A+ + M
Sbjct: 183 SDQHVGNSLVDLYAKGMKMDEAIKVFESLSSVSIVSWNILITGYGQLGCYERAMEVLEFM 242
Query: 425 QHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGR-- 482
Q G +P+ V Y+++L++C + V + F + +PS+ + L+ G+
Sbjct: 243 QE-SGFEPNEVTYSNMLASCIKARDVPSARAMFDKIP-----KPSVTTWNTLLSGYGQEE 296
Query: 483 --AGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGE 522
DL + H+ V+ A +LS+C + N ELG+
Sbjct: 297 LHQETIDLFRRMQHQ-NVQPDRTTLAVILSSCSRLGNFELGK 337
Score = 40.4 bits (93), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Query: 393 VPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDD 452
+PD++ W+ +I A G +AL ++ M EGL P S+LSAC +DD
Sbjct: 1 MPDRNAVSWNTVIAAVARSGSPGEALEMYQGMLQ-EGLAPTNFTLASVLSACGAVAALDD 59
Query: 453 G 453
G
Sbjct: 60 G 60
>gi|357438977|ref|XP_003589765.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355478813|gb|AES60016.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 960
Score = 330 bits (845), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 202/681 (29%), Positives = 334/681 (49%), Gaps = 81/681 (11%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQT----GVHGNSFTFPLVLKACANINSIWDGKRVHSHV 56
MI + NG + T+S M++ G + + F+F V+KAC ++ ++H+ V
Sbjct: 113 MISGYSQNGFHSRSFETFSLMIRDTNDGGKNYDPFSFTSVMKACGSLGDSRLAIQLHALV 172
Query: 57 LKVGFQQDAFVQTGLIDMYSKCSDF-------------------------------VSSR 85
K+GF + +Q ++ MY KC D +
Sbjct: 173 SKLGFGMETCIQNSVVGMYVKCGDVDLAETVFFDIERPSLFCWNSMIYGYSQMYGPYKAL 232
Query: 86 KVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCS- 144
++ + MP R VSWN++IS S+ + + + EM G + T+ SV+S C+
Sbjct: 233 QIFNRMPER--DEVSWNTLISIFSQHGFGVQCLAMFVEMCNQGFSPNFMTYGSVLSACAS 290
Query: 145 ---FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTT 201
+ G +H + ++ + ++ N ++ MYAK G ++ A+ +F + E +SW +
Sbjct: 291 TSDLKWGAHLHARILRMEH-SLDLVFGNGLIDMYAKCGCLDLAKRVFKSLREHDHISWNS 349
Query: 202 IIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSG 261
+I G V+ G +A L NQMRR SV D + ++ C+ +H +KSG
Sbjct: 350 LITGVVHFGLGEDALILFNQMRRSSVVLDEFILPTILGVCSGPDYASTGELLHGYTIKSG 409
Query: 262 YNNEDPLDNLLVSMYTKCGDLE-------------------------------LARRVFD 290
+ P+ N +++MY KCGD + AR FD
Sbjct: 410 MGSSAPVGNAIITMYAKCGDTDKADLVFRLMPLRNTISWTAMITAFSRSGDIGKARGYFD 469
Query: 291 AVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSK 350
+ E+++ W SM+ Y Q G+ E + L+ + V+P+ T T++ ACA+L +
Sbjct: 470 MMPERNIVTWNSMLSTYVQNGFSEEGLKLYVSMRSNGVQPDWITFTTSIRACADLAIVKL 529
Query: 351 GKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAI 410
G ++ + GL N V S++ M+S+CG I +AK F+ + DKDL W+AM+ +A
Sbjct: 530 GMQVVTHATKFGLSLNVSVANSIVTMYSRCGLIKEAKNTFDSIDDKDLISWNAMLAAFAQ 589
Query: 411 HGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSI 470
+G+G + ++ F M E KP+ + Y S+LS CSH G+V +G +F SM FGI P+
Sbjct: 590 NGLGIKVIDTFEDMLKTE-CKPNHISYVSVLSGCSHMGLVAEGKHYFDSMTRVFGISPTN 648
Query: 471 EHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLT 530
EH+ C+VDLLGRAG + A I MP + A VW+ LL +C HH++ L E AAK L+
Sbjct: 649 EHFSCMVDLLGRAGLLEQAKDLIEGMPFKPNATVWSALLGSCRVHHDLRLAETAAKKLME 708
Query: 531 LNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDR 590
L+ + Y+L++N+++ +G A R LM + + G S +E+D V VF +
Sbjct: 709 LDVEGSEGYVLLSNMYSESGELDNVADMRKLMKVKGIRTSRGCSWIEVDNRVHVFTVDET 768
Query: 591 SHHLSVDIRKTLKELHIKLLE 611
SH +KE+++KL E
Sbjct: 769 SH-------PQIKEVYLKLEE 782
Score = 179 bits (453), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 122/453 (26%), Positives = 214/453 (47%), Gaps = 46/453 (10%)
Query: 55 HVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLN 114
V + ++ F +I S + K+ DEMPVR++ VSW ++IS +S+ +
Sbjct: 64 QVFQETHHRNIFTWNTMIRALVSSSRMSDAEKLFDEMPVRVKDSVSWTTMISGYSQNGFH 123
Query: 115 DEAI----LVLKEMWVLGLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIP 166
+ L++++ G +F SV+ C R I +H V KLG E
Sbjct: 124 SRSFETFSLMIRDTNDGGKNYDPFSFTSVMKACGSLGDSRLAIQLHALVSKLG-FGMETC 182
Query: 167 LANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRR-- 224
+ NSV+ MY K G V+ A ++F +I S+ W ++I GY + +A + N+M
Sbjct: 183 IQNSVVGMYVKCGDVDLAETVFFDIERPSLFCWNSMIYGYSQMYGPYKALQIFNRMPERD 242
Query: 225 -----------------------------MSVTPDLVVFLNLILGCAQVGNLFLALSMHS 255
+P+ + + +++ CA +L +H+
Sbjct: 243 EVSWNTLISIFSQHGFGVQCLAMFVEMCNQGFSPNFMTYGSVLSACASTSDLKWGAHLHA 302
Query: 256 LLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSE 315
+L+ ++ + N L+ MY KCG L+LA+RVF ++ E W S+I G G +
Sbjct: 303 RILRMEHSLDLVFGNGLIDMYAKCGCLDLAKRVFKSLREHDHISWNSLITGVVHFGLGED 362
Query: 316 AVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIH 375
A+ LF ++ ++SV +E L T L C+ S G+ + Y + +G+ S+ V ++I
Sbjct: 363 ALILFNQMRRSSVVLDEFILPTILGVCSGPDYASTGELLHGYTIKSGMGSSAPVGNAIIT 422
Query: 376 MFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAV 435
M++KCG +KA VF +P ++ W+AMI ++ G +A F M + + V
Sbjct: 423 MYAKCGDTDKADLVFRLMPLRNTISWTAMITAFSRSGDIGKARGYFDMMP-----ERNIV 477
Query: 436 VYTSILSACSHSGMVDDGLSFFKSMQSNFGIEP 468
+ S+LS +G ++GL + SM+SN G++P
Sbjct: 478 TWNSMLSTYVQNGFSEEGLKLYVSMRSN-GVQP 509
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 101/381 (26%), Positives = 171/381 (44%), Gaps = 42/381 (11%)
Query: 169 NSVMSMYAKFGKVNEARSIFDE--IGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMS 226
N+++ ++++A +FDE + VSWTT+I GY G + +F + M R +
Sbjct: 78 NTMIRALVSSSRMSDAEKLFDEMPVRVKDSVSWTTMISGYSQNGFHSRSFETFSLMIRDT 137
Query: 227 ----VTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDL 282
D F +++ C +G+ LA+ +H+L+ K G+ E + N +V MY KCGD+
Sbjct: 138 NDGGKNYDPFSFTSVMKACGSLGDSRLAIQLHALVSKLGFGMETCIQNSVVGMYVKCGDV 197
Query: 283 ELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKR-------------------- 322
+LA VF + S+F W SMI GY+Q+ P +A+ +F R
Sbjct: 198 DLAETVFFDIERPSLFCWNSMIYGYSQMYGPYKALQIFNRMPERDEVSWNTLISIFSQHG 257
Query: 323 -----------LLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQT 371
+ PN T + LSACA L G + I+ +
Sbjct: 258 FGVQCLAMFVEMCNQGFSPNFMTYGSVLSACASTSDLKWGAHLHARILRMEHSLDLVFGN 317
Query: 372 SLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLK 431
LI M++KCG ++ AK VF+ + + D W+++I G G+G+ AL LF +M+ +
Sbjct: 318 GLIDMYAKCGCLDLAKRVFKSLREHDHISWNSLITGVVHFGLGEDALILFNQMRR-SSVV 376
Query: 432 PDAVVYTSILSACSHSGMVDDG-LSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLAL 490
D + +IL CS G L +++S G + + ++ + + G D A
Sbjct: 377 LDEFILPTILGVCSGPDYASTGELLHGYTIKSGMGSSAPVGN--AIITMYAKCGDTDKAD 434
Query: 491 KTIHEMPVEVQAQVWAPLLSA 511
MP+ W +++A
Sbjct: 435 LVFRLMPLR-NTISWTAMITA 454
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/318 (21%), Positives = 131/318 (41%), Gaps = 74/318 (23%)
Query: 249 LALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFL--------- 299
+A +H+ L+ SG ++ L N L+ MY+ CG A +VF +++F
Sbjct: 26 IARKLHAQLILSGLDSSLFLLNNLLHMYSNCGLTHDAFQVFQETHHRNIFTWNTMIRALV 85
Query: 300 ------------------------WTSMIGGYAQLGYPSEAVNLFKRLLKTS----VRPN 331
WT+MI GY+Q G+ S + F +++ + +
Sbjct: 86 SSSRMSDAEKLFDEMPVRVKDSVSWTTMISGYSQNGFHSRSFETFSLMIRDTNDGGKNYD 145
Query: 332 EATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRIN------- 384
+ + + AC LG ++ + G +Q S++ M+ KCG ++
Sbjct: 146 PFSFTSVMKACGSLGDSRLAIQLHALVSKLGFGMETCIQNSVVGMYVKCGDVDLAETVFF 205
Query: 385 ------------------------KAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNL 420
KA ++F R+P++D W+ +I+ ++ HG G Q L +
Sbjct: 206 DIERPSLFCWNSMIYGYSQMYGPYKALQIFNRMPERDEVSWNTLISIFSQHGFGVQCLAM 265
Query: 421 FYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYL--CLVD 478
F +M + +G P+ + Y S+LSAC+ + + G + +E S++ L+D
Sbjct: 266 FVEMCN-QGFSPNFMTYGSVLSACASTSDLKWGAHLHARI---LRMEHSLDLVFGNGLID 321
Query: 479 LLGRAGRFDLALKTIHEM 496
+ + G DLA + +
Sbjct: 322 MYAKCGCLDLAKRVFKSL 339
>gi|242051555|ref|XP_002454923.1| hypothetical protein SORBIDRAFT_03g001460 [Sorghum bicolor]
gi|241926898|gb|EES00043.1| hypothetical protein SORBIDRAFT_03g001460 [Sorghum bicolor]
Length = 741
Score = 330 bits (845), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 194/612 (31%), Positives = 329/612 (53%), Gaps = 15/612 (2%)
Query: 14 TLSTYSSMLQT--GVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKV---GFQQDAFVQ 68
LS + SM+ + V +F V A A + S G H+ K+ + FV
Sbjct: 102 ALSHFRSMMSSTDAVLPTPHSFAAVFTAAARVPSASAGAVAHAFACKLPSSSGSNNVFVS 161
Query: 69 TGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAI----LVLKEM 124
T L++MY K +R+V D+MP R+ VSW +++S ++ ++EA L+L+E
Sbjct: 162 TALLNMYCKLGAISDARRVFDQMP--HRNAVSWAAMVSGYATGKCSEEAFELFRLMLQEC 219
Query: 125 WVLGLELSASTFVSVVS-GCSFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNE 183
+ E A+ +S VS G+ +H V K GL+ + + NS+++MYAK ++
Sbjct: 220 PLEKNEFVATAVLSAVSVPLGLLIGVQLHGLVLKDGLVGF-VSVENSLVTMYAKAECMDA 278
Query: 184 ARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQ 243
A ++F E + ++W+ +I GY G + A + QM +P F+ ++ +
Sbjct: 279 AMAVFGSSKERNSITWSAMITGYAQNGEADCAATMFLQMHSAGFSPTEFTFVGILNASSD 338
Query: 244 VGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLE-KSVFLWTS 302
+G L + H L++K G+ + + + LV MY KCG A+ F + + V +WT+
Sbjct: 339 MGALVVGKQAHGLMVKLGFERQVYVKSALVDMYAKCGCTGDAKDGFHQLYDVDDVVIWTA 398
Query: 303 MIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNG 362
MI G+ Q G EA+ L+ R+ K V P+ T+ + L ACA L +L GK++ I+ G
Sbjct: 399 MITGHVQNGEHEEALMLYSRMDKEGVMPSYLTVTSVLRACACLAALEPGKQLHAQILKCG 458
Query: 363 LESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFY 422
V T+L M+SKCG + + VF R+PD+D+ W+++I+G++ HG G AL+LF
Sbjct: 459 FGLGGSVGTALSTMYSKCGNLEDSMVVFRRMPDRDIISWNSIISGFSQHGRGRDALDLFE 518
Query: 423 KMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGR 482
+M+ +EG+ PD + + ++L ACSH G+VD G +F++M ++G+ P ++HY C+VD+L R
Sbjct: 519 EMK-LEGIAPDHITFINVLCACSHMGLVDRGWFYFRAMSKDYGLIPKLDHYACIVDILSR 577
Query: 483 AGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILM 542
AG+ A I + ++ +W +L AC + ++G YA + L+ L + YIL+
Sbjct: 578 AGQLKEAKDFIESITIDHGTCLWRIVLGACRSLRDFDVGAYAGEQLMELGTEDSSAYILL 637
Query: 543 ANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTL 602
+N++ + W + R LM R ++K+PG S VE++ V VFV G++ H + I L
Sbjct: 638 SNIYAAQRKWNDVERVRHLMRLRGVSKDPGCSWVELNNQVNVFVVGEQQHPEAEKINVEL 697
Query: 603 KELHIKLLEAGY 614
L + + GY
Sbjct: 698 IRLAKHMKDEGY 709
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 134/491 (27%), Positives = 231/491 (47%), Gaps = 20/491 (4%)
Query: 39 ACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSD----FVSSRKVLDEMPVR 94
A +++ + G +H LK G V LI Y CS ++ V ++P
Sbjct: 23 AASSVRTRRAGDALHGWALKSGAASHTPVSNSLITFY--CSPPRPLLGAAFAVFADIPAG 80
Query: 95 LRSVVSWNSIISAHSR----ACLNDEAILVLKEMWVLGLELS-ASTFVSVVSGCSFRQGI 149
LR V SWNS+++ SR A L+ ++ VL S A+ F + S G
Sbjct: 81 LRDVASWNSLLNPLSRHQPLAALSHFRSMMSSTDAVLPTPHSFAAVFTAAARVPSASAGA 140
Query: 150 SMHCCVYKL--GLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYV 207
H KL +N + ++ ++++MY K G +++AR +FD++ + VSW ++ GY
Sbjct: 141 VAHAFACKLPSSSGSNNVFVSTALLNMYCKLGAISDARRVFDQMPHRNAVSWAAMVSGYA 200
Query: 208 NVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVG-NLFLALSMHSLLLKSGYNNED 266
EAF L M + +L V L + + +H L+LK G
Sbjct: 201 TGKCSEEAFELFRLMLQECPLEKNEFVATAVLSAVSVPLGLLIGVQLHGLVLKDGLVGFV 260
Query: 267 PLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKT 326
++N LV+MY K ++ A VF + E++ W++MI GYAQ G A +F ++
Sbjct: 261 SVENSLVTMYAKAECMDAAMAVFGSSKERNSITWSAMITGYAQNGEADCAATMFLQMHSA 320
Query: 327 SVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKA 386
P E T L+A +++G+L GK+ +V G E V+++L+ M++KCG A
Sbjct: 321 GFSPTEFTFVGILNASSDMGALVVGKQAHGLMVKLGFERQVYVKSALVDMYAKCGCTGDA 380
Query: 387 KEVFERVPD-KDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACS 445
K+ F ++ D D+ +W+AMI G+ +G ++AL L+ +M EG+ P + TS+L AC+
Sbjct: 381 KDGFHQLYDVDDVVIWTAMITGHVQNGEHEEALMLYSRMDK-EGVMPSYLTVTSVLRACA 439
Query: 446 HSGMVDDGLSFFKS-MQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQV 504
++ G ++ FG+ S+ L + + G + ++ MP +
Sbjct: 440 CLAALEPGKQLHAQILKCGFGLGGSVG--TALSTMYSKCGNLEDSMVVFRRMP-DRDIIS 496
Query: 505 WAPLLSACMKH 515
W ++S +H
Sbjct: 497 WNSIISGFSQH 507
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 79/320 (24%), Positives = 157/320 (49%), Gaps = 24/320 (7%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI NG + + + M G FTF +L A +++ ++ GK+ H ++K+G
Sbjct: 297 MITGYAQNGEADCAATMFLQMHSAGFSPTEFTFVGILNASSDMGALVVGKQAHGLMVKLG 356
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F++ +V++ L+DMY+KC ++ ++ + VV W ++I+ H + ++EA+++
Sbjct: 357 FERQVYVKSALVDMYAKCGCTGDAKDGFHQL-YDVDDVVIWTAMITGHVQNGEHEEALML 415
Query: 121 LKEMWVLGLELSASTFVSVVSGC----SFRQGISMHCCVYKLGL-LNNEIPLANSVMSMY 175
M G+ S T SV+ C + G +H + K G L + A S +MY
Sbjct: 416 YSRMDKEGVMPSYLTVTSVLRACACLAALEPGKQLHAQILKCGFGLGGSVGTALS--TMY 473
Query: 176 AKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFL 235
+K G + ++ +F + + I+SW +II G+ G +A L +M+ + PD + F+
Sbjct: 474 SKCGNLEDSMVVFRRMPDRDIISWNSIISGFSQHGRGRDALDLFEEMKLEGIAPDHITFI 533
Query: 236 NLILGCAQVGNL------FLALSMHSLLLKSGYNNEDPLDNL--LVSMYTKCGDLELARR 287
N++ C+ +G + F A+S L+ LD+ +V + ++ G L+ A+
Sbjct: 534 NVLCACSHMGLVDRGWFYFRAMSKDYGLIPK-------LDHYACIVDILSRAGQLKEAKD 586
Query: 288 VFDAV-LEKSVFLWTSMIGG 306
+++ ++ LW ++G
Sbjct: 587 FIESITIDHGTCLWRIVLGA 606
>gi|225428334|ref|XP_002279974.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
mitochondrial [Vitis vinifera]
Length = 623
Score = 330 bits (845), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 183/541 (33%), Positives = 303/541 (56%), Gaps = 15/541 (2%)
Query: 88 LDEMPVRLRSVVSWNSIISAHSRACLN---DEAILVLKEMWVLGLELSASTFVSVVSGCS 144
L M LR V + +++ + C A+ + M G+ A T+ ++ CS
Sbjct: 7 LKGMKPPLRYVADPSPLVNEFANFCHQWDLHRAMRAMDAMERHGVFADAITYSELIKCCS 66
Query: 145 FR----QGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWT 200
R +G +H ++ G ++ + N++++MY KF + EA +FDE+ E ++VSWT
Sbjct: 67 ARGAVQEGKRVHEHIFCKGY-EPKMFVVNTLLNMYVKFNLLEEAEDLFDEMPERNVVSWT 125
Query: 201 TIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKS 260
T+I Y N N ++A M R V P++ + +++ C + NL +H ++K+
Sbjct: 126 TMISAYSNKLN-DKALKCLILMFREGVRPNMFTYSSVLRACDGLPNL---RQLHCGIIKT 181
Query: 261 GYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLF 320
G ++ + + L+ +Y+K DL+ A VFD + + + +W S+IGG+AQ +EA+NLF
Sbjct: 182 GLESDVFVRSALIDVYSKWSDLDNALGVFDEMPTRDLVVWNSIIGGFAQNSDGNEALNLF 241
Query: 321 KRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKC 380
KR+ + ++ATL + L AC L L G+++ +++ + + + +LI M+ KC
Sbjct: 242 KRMKRAGFLADQATLTSVLRACTGLALLELGRQVHVHVL--KFDQDLILNNALIDMYCKC 299
Query: 381 GRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSI 440
G + A F R+ +KD+ WS M+ G A +G QAL LF M+ G +P+ + +
Sbjct: 300 GSLEDANSAFSRMVEKDVISWSTMVAGLAQNGYSRQALELFESMKE-SGSRPNYITVLGV 358
Query: 441 LSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEV 500
L ACSH+G+V+ G +F+SM+ FG++P EHY CL+DLLGRAGR D A+K IHEM E
Sbjct: 359 LFACSHAGLVEKGWYYFRSMKKLFGVDPGREHYGCLIDLLGRAGRLDEAVKLIHEMECEP 418
Query: 501 QAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARG 560
+ W LL AC H NV+L YAAK ++ L P G YIL++N++ + W++ A R
Sbjct: 419 DSVTWRTLLGACRVHRNVDLAIYAAKKIIELEPEDAGTYILLSNIYANTQRWEDVAEVRK 478
Query: 561 LMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKELHIKLLEAGYIAEADI 620
M +R + K PG S +E+D + VF+ GD SH +I + L +L +++ GY+ + +
Sbjct: 479 TMTNRGIRKTPGCSWIEVDKQIHVFILGDTSHPKIEEIVQRLNDLIERVMGVGYVPDTNF 538
Query: 621 V 621
V
Sbjct: 539 V 539
Score = 211 bits (537), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 138/473 (29%), Positives = 245/473 (51%), Gaps = 20/473 (4%)
Query: 4 NSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQ 63
N + + +M + GV ++ T+ ++K C+ ++ +GKRVH H+ G++
Sbjct: 29 NFCHQWDLHRAMRAMDAMERHGVFADAITYSELIKCCSARGAVQEGKRVHEHIFCKGYEP 88
Query: 64 DAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKE 123
FV L++MY K + + + DEMP R+VVSW ++ISA+S LND+A+ L
Sbjct: 89 KMFVVNTLLNMYVKFNLLEEAEDLFDEMPE--RNVVSWTTMISAYSNK-LNDKALKCLIL 145
Query: 124 MWVLGLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFG 179
M+ G+ + T+ SV+ C + RQ +HC + K G L +++ + ++++ +Y+K+
Sbjct: 146 MFREGVRPNMFTYSSVLRACDGLPNLRQ---LHCGIIKTG-LESDVFVRSALIDVYSKWS 201
Query: 180 KVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLIL 239
++ A +FDE+ +V W +IIGG+ + NEA L +M+R D +++
Sbjct: 202 DLDNALGVFDEMPTRDLVVWNSIIGGFAQNSDGNEALNLFKRMKRAGFLADQATLTSVLR 261
Query: 240 GCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFL 299
C + L L +H +LK ++ + L+N L+ MY KCG LE A F ++EK V
Sbjct: 262 ACTGLALLELGRQVHVHVLK--FDQDLILNNALIDMYCKCGSLEDANSAFSRMVEKDVIS 319
Query: 300 WTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKG-KEIEEYI 358
W++M+ G AQ GY +A+ LF+ + ++ RPN T+ L AC+ G + KG
Sbjct: 320 WSTMVAGLAQNGYSRQALELFESMKESGSRPNYITVLGVLFACSHAGLVEKGWYYFRSMK 379
Query: 359 VLNGLESNRQVQTSLIHMFSKCGRINKA-KEVFERVPDKDLAVWSAMINGYAIHGMGDQA 417
L G++ R+ LI + + GR+++A K + E + D W ++ +H D A
Sbjct: 380 KLFGVDPGREHYGCLIDLLGRAGRLDEAVKLIHEMECEPDSVTWRTLLGACRVHRNVDLA 439
Query: 418 LNLFYKMQHVEGLKP-DAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPS 469
+ Y + + L+P DA Y + + +++ +D K+M +N GI +
Sbjct: 440 I---YAAKKIIELEPEDAGTYILLSNIYANTQRWEDVAEVRKTM-TNRGIRKT 488
>gi|449457327|ref|XP_004146400.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49710-like [Cucumis sativus]
Length = 720
Score = 329 bits (844), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 193/622 (31%), Positives = 327/622 (52%), Gaps = 41/622 (6%)
Query: 33 FPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLD--- 89
F LK C + GK +H+ +K ++ + +YSKC ++R+V D
Sbjct: 11 FRQFLKTCIAHRDLRTGKSLHALYIKSFVPTSTYLSNHFLLLYSKCRRLSAARRVFDHTH 70
Query: 90 ----------------------------EMPVRLRSVVSWNSIISAHSRACLNDEAILVL 121
EMP VS+N++I+A++R A +
Sbjct: 71 DCNVFSFNTLISAYAKESYVEVAHQLFDEMPQP--DSVSYNTLIAAYARRGDTQPAFQLF 128
Query: 122 KEMWVLGLELSASTFVSVVSGCSFRQGI--SMHCCVYKLGLLNNEIPLANSVMSMYAKFG 179
EM L++ T +++ C G+ +H GL ++ + + N++++ Y+K G
Sbjct: 129 LEMREAFLDMDGFTLSGIITACGINVGLIRQLHALSVVTGL-DSYVSVGNALITSYSKNG 187
Query: 180 KVNEARSIFDEIGE-TSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLI 238
+ EAR IF + E VSW +++ Y+ ++A L +M + D+ +++
Sbjct: 188 FLKEARRIFHWLSEDRDEVSWNSMVVAYMQHREGSKALELYLEMTVRGLIVDIFTLASVL 247
Query: 239 LGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLEL-ARRVFDAVLEKSV 297
V +L L H+ L+KSGY+ + + L+ +Y+KCG L R+VFD + +
Sbjct: 248 TAFTNVQDLLGGLQFHAKLIKSGYHQNSHVGSGLIDLYSKCGGCMLDCRKVFDEISNPDL 307
Query: 298 FLWTSMIGGYAQL-GYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEE 356
LW +MI GY+ EA+ F++L RP++ +L +SAC+ + S S+G+++
Sbjct: 308 VLWNTMISGYSLYEDLSDEALECFRQLQVVGHRPDDCSLVCVISACSNMSSPSQGRQVHG 367
Query: 357 YIVLNGLESNR-QVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGD 415
+ + SNR V +LI M+SKCG + AK +F+ +P+ + +++MI GYA HGMG
Sbjct: 368 LALKLDIPSNRISVNNALIAMYSKCGNLRDAKTLFDTMPEHNTVSYNSMIAGYAQHGMGF 427
Query: 416 QALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLC 475
Q+L+LF +M + G P + + S+L+AC+H+G V+DG +F M+ FGIEP H+ C
Sbjct: 428 QSLHLFQRMLEM-GFTPTNITFISVLAACAHTGRVEDGKIYFNMMKQKFGIEPEAGHFSC 486
Query: 476 LVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGS 535
++DLLGRAG+ A + I +P + W+ LL AC H NVEL AA LL L+P +
Sbjct: 487 MIDLLGRAGKLSEAERLIETIPFDPGFFFWSALLGACRIHGNVELAIKAANRLLQLDPLN 546
Query: 536 TGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLS 595
Y+++AN+++ G ++AA+ R LM DR + K+PG S +E++ + +FVA D H +
Sbjct: 547 AAPYVMLANIYSDNGRLQDAASVRKLMRDRGVKKKPGCSWIEVNRRIHIFVAEDTFHPMI 606
Query: 596 VDIRKTLKELHIKLLEAGYIAE 617
I++ L+E+ K+ + GY E
Sbjct: 607 KKIQEYLEEMMRKIKKVGYTPE 628
Score = 142 bits (357), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 92/321 (28%), Positives = 166/321 (51%), Gaps = 10/321 (3%)
Query: 13 ETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLI 72
+ L Y M G+ + FT VL A N+ + G + H+ ++K G+ Q++ V +GLI
Sbjct: 223 KALELYLEMTVRGLIVDIFTLASVLTAFTNVQDLLGGLQFHAKLIKSGYHQNSHVGSGLI 282
Query: 73 DMYSKCSD-FVSSRKVLDEMPVRLRSVVSWNSIISAHS-RACLNDEAILVLKEMWVLGLE 130
D+YSKC + RKV DE + +V WN++IS +S L+DEA+ +++ V+G
Sbjct: 283 DLYSKCGGCMLDCRKVFDE--ISNPDLVLWNTMISGYSLYEDLSDEALECFRQLQVVGHR 340
Query: 131 LSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARS 186
+ V V+S C S QG +H KL + +N I + N++++MY+K G + +A++
Sbjct: 341 PDDCSLVCVISACSNMSSPSQGRQVHGLALKLDIPSNRISVNNALIAMYSKCGNLRDAKT 400
Query: 187 IFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGN 246
+FD + E + VS+ ++I GY G ++ L +M M TP + F++++ CA G
Sbjct: 401 LFDTMPEHNTVSYNSMIAGYAQHGMGFQSLHLFQRMLEMGFTPTNITFISVLAACAHTGR 460
Query: 247 LFLA-LSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAV-LEKSVFLWTSMI 304
+ + + + K G E + ++ + + G L A R+ + + + F W++++
Sbjct: 461 VEDGKIYFNMMKQKFGIEPEAGHFSCMIDLLGRAGKLSEAERLIETIPFDPGFFFWSALL 520
Query: 305 GGYAQLGYPSEAVNLFKRLLK 325
G G A+ RLL+
Sbjct: 521 GACRIHGNVELAIKAANRLLQ 541
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 73/322 (22%), Positives = 141/322 (43%), Gaps = 36/322 (11%)
Query: 12 EETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAF-VQTG 70
+E L + + G + + V+ AC+N++S G++VH LK+ + V
Sbjct: 325 DEALECFRQLQVVGHRPDDCSLVCVISACSNMSSPSQGRQVHGLALKLDIPSNRISVNNA 384
Query: 71 LIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLE 130
LI MYSKC + ++ + D MP + VS+NS+I+ +++ + +++ + + M +G
Sbjct: 385 LIAMYSKCGNLRDAKTLFDTMPE--HNTVSYNSMIAGYAQHGMGFQSLHLFQRMLEMGFT 442
Query: 131 LSASTFVSVVSGCSFR-----QGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEAR 185
+ TF+SV++ C+ I + K G + E + ++ + + GK++EA
Sbjct: 443 PTNITFISVLAACAHTGRVEDGKIYFNMMKQKFG-IEPEAGHFSCMIDLLGRAGKLSEAE 501
Query: 186 SIFDEIG-ETSIVSWTTIIGGYVNVGNVNEAFGLCN---QMRRMSVTPDLVVFLNLILGC 241
+ + I + W+ ++G GNV A N Q+ ++ P V+ N+
Sbjct: 502 RLIETIPFDPGFFFWSALLGACRIHGNVELAIKAANRLLQLDPLNAAP-YVMLANIY--- 557
Query: 242 AQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRV--------FDAVL 293
+ G L A S+ L+ G V C +E+ RR+ F ++
Sbjct: 558 SDNGRLQDAASVRKLMRDRG-----------VKKKPGCSWIEVNRRIHIFVAEDTFHPMI 606
Query: 294 EKSVFLWTSMIGGYAQLGYPSE 315
+K M+ ++GY E
Sbjct: 607 KKIQEYLEEMMRKIKKVGYTPE 628
>gi|224141479|ref|XP_002324099.1| predicted protein [Populus trichocarpa]
gi|222867101|gb|EEF04232.1| predicted protein [Populus trichocarpa]
Length = 676
Score = 329 bits (844), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 162/459 (35%), Positives = 267/459 (58%), Gaps = 12/459 (2%)
Query: 169 NSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMS-- 226
N ++S YAK G + EA+S+FD++ E SWT +I GYV NEA L M+R
Sbjct: 140 NILISGYAKMGLLQEAKSLFDKMPERDNFSWTAMISGYVRHDRPNEALELFRMMKRSDNS 199
Query: 227 ----VTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDL 282
T + + C ++G +H ++++G ++++ + + L MY KCG +
Sbjct: 200 KSNKFTVSSALAAAAAVPCLRIGK-----EIHGYIMRTGLDSDEVVWSALSDMYGKCGSI 254
Query: 283 ELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSAC 342
E AR +FD ++++ + WT+MI Y Q G E +LF LL++ +RPNE T + L+AC
Sbjct: 255 EEARHIFDKMVDRDIVTWTAMIDRYFQDGRRKEGFDLFADLLRSGIRPNEFTFSGVLNAC 314
Query: 343 AELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWS 402
A S GK++ Y+ G + ++L+HM+SKCG + A+ VF+ P DL W+
Sbjct: 315 ANQTSEELGKKVHGYMTRVGFDPFSFAASALVHMYSKCGNMVSAERVFKETPQPDLFSWT 374
Query: 403 AMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQS 462
++I GYA +G D+A+ ++++ G +PD + + +LSAC+H+G+VD GL +F S++
Sbjct: 375 SLIAGYAQNGQPDEAIR-YFELLVKSGTQPDHITFVGVLSACAHAGLVDKGLDYFHSIKE 433
Query: 463 NFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGE 522
+G+ + +HY C++DLL R+G+FD A I +M ++ +WA LL C H N++L +
Sbjct: 434 QYGLTHTADHYACIIDLLARSGQFDEAENIISKMSMKPDKFLWASLLGGCRIHGNLKLAQ 493
Query: 523 YAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSV 582
AA+ L + P + Y+ +AN++ +AGMW E A R MDDR + K+PG S + I V
Sbjct: 494 RAAEALFEIEPENPATYVTLANIYATAGMWSEVAKIRKTMDDRGVVKKPGLSWIAIKRDV 553
Query: 583 QVFVAGDRSHHLSVDIRKTLKELHIKLLEAGYIAEADIV 621
VF+ GD SH S +I + L +L ++ E G++ + + V
Sbjct: 554 HVFLVGDDSHPKSKEINEFLGKLSKRMKEEGFVPDTNFV 592
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 125/424 (29%), Positives = 207/424 (48%), Gaps = 53/424 (12%)
Query: 33 FPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMP 92
+ ++++C + GK+VH H+ GF F+ L++MY+KC + S+K+ DEMP
Sbjct: 73 YSTLIQSCIKSRLLQQGKKVHQHIKLSGFVPGLFILNRLLEMYAKCDSLMDSQKLFDEMP 132
Query: 93 VRLRSVVSWNSIISAHSRACLNDEAILVLKEM-------WVL-------------GLEL- 131
R + SWN +IS +++ L EA + +M W LEL
Sbjct: 133 ER--DLCSWNILISGYAKMGLLQEAKSLFDKMPERDNFSWTAMISGYVRHDRPNEALELF 190
Query: 132 --------SASTFVSVVSGCS-------FRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
S S +V S + R G +H + + GL ++E+ + +++ MY
Sbjct: 191 RMMKRSDNSKSNKFTVSSALAAAAAVPCLRIGKEIHGYIMRTGLDSDEV-VWSALSDMYG 249
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K G + EAR IFD++ + IV+WT +I Y G E F L + R + P+ F
Sbjct: 250 KCGSIEEARHIFDKMVDRDIVTWTAMIDRYFQDGRRKEGFDLFADLLRSGIRPNEFTFSG 309
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
++ CA + L +H + + G++ + LV MY+KCG++ A RVF +
Sbjct: 310 VLNACANQTSEELGKKVHGYMTRVGFDPFSFAASALVHMYSKCGNMVSAERVFKETPQPD 369
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEI-- 354
+F WTS+I GYAQ G P EA+ F+ L+K+ +P+ T LSACA G + KG +
Sbjct: 370 LFSWTSLIAGYAQNGQPDEAIRYFELLVKSGTQPDHITFVGVLSACAHAGLVDKGLDYFH 429
Query: 355 ---EEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERV---PDKDLAVWSAMINGY 408
E+Y GL +I + ++ G+ ++A+ + ++ PDK L W++++ G
Sbjct: 430 SIKEQY----GLTHTADHYACIIDLLARSGQFDEAENIISKMSMKPDKFL--WASLLGGC 483
Query: 409 AIHG 412
IHG
Sbjct: 484 RIHG 487
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/313 (23%), Positives = 141/313 (45%), Gaps = 10/313 (3%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQT-GVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKV 59
MI + E L + M ++ N FT L A A + + GK +H ++++
Sbjct: 173 MISGYVRHDRPNEALELFRMMKRSDNSKSNKFTVSSALAAAAAVPCLRIGKEIHGYIMRT 232
Query: 60 GFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAIL 119
G D V + L DMY KC +R + D+M R +V+W ++I + + E
Sbjct: 233 GLDSDEVVWSALSDMYGKCGSIEEARHIFDKMVD--RDIVTWTAMIDRYFQDGRRKEGFD 290
Query: 120 VLKEMWVLGLELSASTFVSVVSGCSFRQ----GISMHCCVYKLGLLNNEIPLANSVMSMY 175
+ ++ G+ + TF V++ C+ + G +H + ++G A++++ MY
Sbjct: 291 LFADLLRSGIRPNEFTFSGVLNACANQTSEELGKKVHGYMTRVGFDPFSFA-ASALVHMY 349
Query: 176 AKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFL 235
+K G + A +F E + + SWT++I GY G +EA + + PD + F+
Sbjct: 350 SKCGNMVSAERVFKETPQPDLFSWTSLIAGYAQNGQPDEAIRYFELLVKSGTQPDHITFV 409
Query: 236 NLILGCAQVGNLFLALS-MHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAV-L 293
++ CA G + L HS+ + G + ++ + + G + A + + +
Sbjct: 410 GVLSACAHAGLVDKGLDYFHSIKEQYGLTHTADHYACIIDLLARSGQFDEAENIISKMSM 469
Query: 294 EKSVFLWTSMIGG 306
+ FLW S++GG
Sbjct: 470 KPDKFLWASLLGG 482
Score = 105 bits (263), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 73/250 (29%), Positives = 118/250 (47%), Gaps = 32/250 (12%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI +G +E ++ +L++G+ N FTF VL ACAN S GK+VH ++ +VG
Sbjct: 275 MIDRYFQDGRRKEGFDLFADLLRSGIRPNEFTFSGVLNACANQTSEELGKKVHGYMTRVG 334
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F +F + L+ MYSKC + VS+ +V E P + SW S+I+ +++ DEAI
Sbjct: 335 FDPFSFAASALVHMYSKCGNMVSAERVFKETP--QPDLFSWTSLIAGYAQNGQPDEAIRY 392
Query: 121 LKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGK 180
+ + G + TFV V+S C+ GL++ + +S+ Y
Sbjct: 393 FELLVKSGTQPDHITFVGVLSACA------------HAGLVDKGLDYFHSIKEQYGLTHT 440
Query: 181 VNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILG 240
+ I D + + G +EA N + +MS+ PD ++ +L+ G
Sbjct: 441 ADHYACIIDLLARS---------------GQFDEAE---NIISKMSMKPDKFLWASLLGG 482
Query: 241 CAQVGNLFLA 250
C GNL LA
Sbjct: 483 CRIHGNLKLA 492
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 75/133 (56%), Gaps = 5/133 (3%)
Query: 329 RPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKE 388
+P+ + +T + +C + L +GK++ ++I L+G + L+ M++KC + +++
Sbjct: 67 KPSASVYSTLIQSCIKSRLLQQGKKVHQHIKLSGFVPGLFILNRLLEMYAKCDSLMDSQK 126
Query: 389 VFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSG 448
+F+ +P++DL W+ +I+GYA G+ +A +LF KM + D +T+++S
Sbjct: 127 LFDEMPERDLCSWNILISGYAKMGLLQEAKSLFDKMP-----ERDNFSWTAMISGYVRHD 181
Query: 449 MVDDGLSFFKSMQ 461
++ L F+ M+
Sbjct: 182 RPNEALELFRMMK 194
>gi|77554180|gb|ABA96976.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 780
Score = 329 bits (844), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 197/588 (33%), Positives = 317/588 (53%), Gaps = 12/588 (2%)
Query: 8 NGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFV 67
NG F + SM+++G N + V+ AC G +H+ +KVG +
Sbjct: 198 NGMFHDARRALVSMMRSGFPLNVASLVSVVPACGTEQEEKFGLSIHALAVKVGLNTMVNL 257
Query: 68 QTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMW-- 125
L+DMY K D +S +V D M + + VSWNS I A + + + ++M
Sbjct: 258 ANALVDMYGKFGDVEASMQVFDGMLEQ--NEVSWNSAIGCFLNAGFYGDVLRMFRKMSEH 315
Query: 126 -VLGLELSASTFV-SVVSGCSFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNE 183
V+ ++ S+ + ++V SF G +H K + + +I +ANS++ MYAKFG + +
Sbjct: 316 NVMPGSITLSSLLPALVELGSFDLGREVHGYSIKRAM-DLDIFVANSLVDMYAKFGSLEK 374
Query: 184 ARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQ 243
A +IF+++ + ++VSW +I V G EAF L M++ P+ + +N++ CA+
Sbjct: 375 ASTIFEQMKDRNVVSWNAMIANLVQNGAETEAFRLVTDMQKSGECPNSITLVNVLPACAR 434
Query: 244 VGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSM 303
+ +L + +H+ ++ G + + N L+ MY+KCG L LAR +F+ EK + ++
Sbjct: 435 MASLKMGKQIHAWSIRRGLMFDLFISNALIDMYSKCGQLSLARNIFERS-EKDDVSYNTL 493
Query: 304 IGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGL 363
I GY+Q + E++ LFK++ + + + LSAC L GKEI +V L
Sbjct: 494 ILGYSQSPWCFESLLLFKQMRSVGIDYDAVSFMGALSACTNLSVFKHGKEIHCVLVRRLL 553
Query: 364 ESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYK 423
+ + SL+ +++K G + A ++F ++ KD+A W+ MI GY +HG D A LF
Sbjct: 554 SGHPFLSNSLLDLYTKGGMLVTASKIFNKITKKDVASWNTMILGYGMHGQIDIAFELFEL 613
Query: 424 MQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRA 483
M+ +GL D V Y ++L+ACSH G+VD G +F M + IEP HY C+VDLLGRA
Sbjct: 614 MKG-DGLDYDHVSYIAVLAACSHGGLVDKGKKYFSQMVAQ-NIEPQQMHYACMVDLLGRA 671
Query: 484 GRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMA 543
G+ + I +MP + VW LL AC H N+EL ++AA++L L P +G Y LM
Sbjct: 672 GQLSKCAEIIRDMPFPANSDVWGALLGACRIHGNIELAQWAAEHLFELKPEHSGYYTLMI 731
Query: 544 NLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVE-IDGS-VQVFVAGD 589
N++ G W EA R LM R++ K P +S V+ DG+ +Q F+ GD
Sbjct: 732 NMYAETGRWNEANKIRKLMKSRKVQKNPAYSWVQDQDGNKLQAFLVGD 779
Score = 228 bits (582), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 147/447 (32%), Positives = 233/447 (52%), Gaps = 11/447 (2%)
Query: 13 ETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGK--RVHSHVLKVGFQQDAFVQTG 70
E L Y+ ML++ V + TFP L A A + + K +H+ L+ G D F
Sbjct: 100 EALRVYNLMLRSAVRPDDRTFPFALHAAAAAVASAEDKGLELHASALRRGHLADVFTGNT 159
Query: 71 LIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLE 130
L+ Y+ C +R+V DEMP R VVSWNS++SA + +A L M G
Sbjct: 160 LVAFYAACGKACDARRVFDEMPER--DVVSWNSLVSAFLVNGMFHDARRALVSMMRSGFP 217
Query: 131 LSASTFVSVVSGCSFRQ----GISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARS 186
L+ ++ VSVV C Q G+S+H K+GL N + LAN+++ MY KFG V +
Sbjct: 218 LNVASLVSVVPACGTEQEEKFGLSIHALAVKVGL-NTMVNLANALVDMYGKFGDVEASMQ 276
Query: 187 IFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGN 246
+FD + E + VSW + IG ++N G + + +M +V P + +L+ ++G+
Sbjct: 277 VFDGMLEQNEVSWNSAIGCFLNAGFYGDVLRMFRKMSEHNVMPGSITLSSLLPALVELGS 336
Query: 247 LFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGG 306
L +H +K + + + N LV MY K G LE A +F+ + +++V W +MI
Sbjct: 337 FDLGREVHGYSIKRAMDLDIFVANSLVDMYAKFGSLEKASTIFEQMKDRNVVSWNAMIAN 396
Query: 307 YAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESN 366
Q G +EA L + K+ PN TL L ACA + SL GK+I + + GL +
Sbjct: 397 LVQNGAETEAFRLVTDMQKSGECPNSITLVNVLPACARMASLKMGKQIHAWSIRRGLMFD 456
Query: 367 RQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQH 426
+ +LI M+SKCG+++ A+ +FER +KD ++ +I GY+ ++L LF +M+
Sbjct: 457 LFISNALIDMYSKCGQLSLARNIFER-SEKDDVSYNTLILGYSQSPWCFESLLLFKQMRS 515
Query: 427 VEGLKPDAVVYTSILSACSHSGMVDDG 453
V G+ DAV + LSAC++ + G
Sbjct: 516 V-GIDYDAVSFMGALSACTNLSVFKHG 541
Score = 183 bits (464), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 128/448 (28%), Positives = 222/448 (49%), Gaps = 12/448 (2%)
Query: 50 KRVHSHVLKVGFQQDAFVQTG-LIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAH 108
+R H+ L G + G L+ Y+ SD S+R VL P+RLRS WNS+ A
Sbjct: 33 RRAHAASLVSGALATSLPLAGALLLSYAALSDLASARLVLRHHPLRLRSAFLWNSLSRAL 92
Query: 109 SRACLNDEAILVLKEMWVLGLELSASTF------VSVVSGCSFRQGISMHCCVYKLGLLN 162
S A L EA+ V M + TF + + +G+ +H + G L
Sbjct: 93 SSASLPSEALRVYNLMLRSAVRPDDRTFPFALHAAAAAVASAEDKGLELHASALRRGHLA 152
Query: 163 NEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQM 222
++ N++++ YA GK +AR +FDE+ E +VSW +++ ++ G ++A M
Sbjct: 153 -DVFTGNTLVAFYAACGKACDARRVFDEMPERDVVSWNSLVSAFLVNGMFHDARRALVSM 211
Query: 223 RRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDL 282
R ++ ++++ C LS+H+L +K G N L N LV MY K GD+
Sbjct: 212 MRSGFPLNVASLVSVVPACGTEQEEKFGLSIHALAVKVGLNTMVNLANALVDMYGKFGDV 271
Query: 283 ELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSAC 342
E + +VFD +LE++ W S IG + G+ + + +F+++ + +V P TL++ L A
Sbjct: 272 EASMQVFDGMLEQNEVSWNSAIGCFLNAGFYGDVLRMFRKMSEHNVMPGSITLSSLLPAL 331
Query: 343 AELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWS 402
ELGS G+E+ Y + ++ + V SL+ M++K G + KA +FE++ D+++ W+
Sbjct: 332 VELGSFDLGREVHGYSIKRAMDLDIFVANSLVDMYAKFGSLEKASTIFEQMKDRNVVSWN 391
Query: 403 AMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFK-SMQ 461
AMI +G +A L MQ G P+++ ++L AC+ + G S++
Sbjct: 392 AMIANLVQNGAETEAFRLVTDMQK-SGECPNSITLVNVLPACARMASLKMGKQIHAWSIR 450
Query: 462 SNFGIEPSIEHYLCLVDLLGRAGRFDLA 489
+ I + L+D+ + G+ LA
Sbjct: 451 RGLMFDLFISN--ALIDMYSKCGQLSLA 476
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 122/462 (26%), Positives = 225/462 (48%), Gaps = 13/462 (2%)
Query: 7 NNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAF 66
N G + + L + M + V S T +L A + S G+ VH + +K D F
Sbjct: 298 NAGFYGDVLRMFRKMSEHNVMPGSITLSSLLPALVELGSFDLGREVHGYSIKRAMDLDIF 357
Query: 67 VQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWV 126
V L+DMY+K + + ++M + R+VVSWN++I+ + EA ++ +M
Sbjct: 358 VANSLVDMYAKFGSLEKASTIFEQM--KDRNVVSWNAMIANLVQNGAETEAFRLVTDMQK 415
Query: 127 LGLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVN 182
G ++ T V+V+ C S + G +H + GL+ ++ ++N+++ MY+K G+++
Sbjct: 416 SGECPNSITLVNVLPACARMASLKMGKQIHAWSIRRGLM-FDLFISNALIDMYSKCGQLS 474
Query: 183 EARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCA 242
AR+IF E E VS+ T+I GY E+ L QMR + + D V F+ + C
Sbjct: 475 LARNIF-ERSEKDDVSYNTLILGYSQSPWCFESLLLFKQMRSVGIDYDAVSFMGALSACT 533
Query: 243 QVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTS 302
+ +H +L++ + L N L+ +YTK G L A ++F+ + +K V W +
Sbjct: 534 NLSVFKHGKEIHCVLVRRLLSGHPFLSNSLLDLYTKGGMLVTASKIFNKITKKDVASWNT 593
Query: 303 MIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNG 362
MI GY G A LF+ + + + + L+AC+ G + KGK+ +V
Sbjct: 594 MILGYGMHGQIDIAFELFELMKGDGLDYDHVSYIAVLAACSHGGLVDKGKKYFSQMVAQN 653
Query: 363 LESNRQVQTSLIHMFSKCGRINKAKEVFERVP-DKDLAVWSAMINGYAIHGMGDQALNLF 421
+E + ++ + + G+++K E+ +P + VW A++ IHG + A
Sbjct: 654 IEPQQMHYACMVDLLGRAGQLSKCAEIIRDMPFPANSDVWGALLGACRIHGNIELAQ--- 710
Query: 422 YKMQHVEGLKPD-AVVYTSILSACSHSGMVDDGLSFFKSMQS 462
+ +H+ LKP+ + YT +++ + +G ++ K M+S
Sbjct: 711 WAAEHLFELKPEHSGYYTLMINMYAETGRWNEANKIRKLMKS 752
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 77/249 (30%), Positives = 134/249 (53%), Gaps = 8/249 (3%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI N NG+ E + M ++G NS T VL ACA + S+ GK++H+ ++ G
Sbjct: 393 MIANLVQNGAETEAFRLVTDMQKSGECPNSITLVNVLPACARMASLKMGKQIHAWSIRRG 452
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
D F+ LIDMYSKC +R + + + VS+N++I +S++ E++L+
Sbjct: 453 LMFDLFISNALIDMYSKCGQLSLARNIFERSE---KDDVSYNTLILGYSQSPWCFESLLL 509
Query: 121 LKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
K+M +G++ A +F+ +S C+ F+ G +HC + + LL+ L+NS++ +Y
Sbjct: 510 FKQMRSVGIDYDAVSFMGALSACTNLSVFKHGKEIHCVLVR-RLLSGHPFLSNSLLDLYT 568
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K G + A IF++I + + SW T+I GY G ++ AF L M+ + D V ++
Sbjct: 569 KGGMLVTASKIFNKITKKDVASWNTMILGYGMHGQIDIAFELFELMKGDGLDYDHVSYIA 628
Query: 237 LILGCAQVG 245
++ C+ G
Sbjct: 629 VLAACSHGG 637
>gi|297604972|ref|NP_001056430.2| Os05g0581300 [Oryza sativa Japonica Group]
gi|255676606|dbj|BAF18344.2| Os05g0581300 [Oryza sativa Japonica Group]
Length = 704
Score = 329 bits (844), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 206/630 (32%), Positives = 325/630 (51%), Gaps = 25/630 (3%)
Query: 9 GSFEETLSTYSSMLQTG---VHGNSFTFPLVLKACA---NINSIWDGKRVHSHVLKVGFQ 62
G F ++ +S + + + F LV K+CA + + +H+ ++
Sbjct: 46 GDFPGAMALFSRLRASSPPLAPADPFVLSLVFKSCAAAADARFLPHAASLHAFAVRSSAV 105
Query: 63 QDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLK 122
FV T L D+Y+K + KV DEMP ++VVSW +++++ +RA EA+
Sbjct: 106 SSVFVATALADVYAKAGCLGLALKVFDEMP--HKNVVSWTTLVASLTRAGRRHEALRRFS 163
Query: 123 EMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKF 178
EM G+ + + + ++ C+ +G +H KLGL ++ +AN++ ++YA+
Sbjct: 164 EMRASGVHCDSYAYAAALTACADAGLLSRGREVHAFCAKLGL-DSTPYVANTLATLYARC 222
Query: 179 GKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRR----MSVTPDLVVF 234
V+ A + +G + +WTT+I YV G EA +M R ++ +P+ +
Sbjct: 223 SDVDRALAAVSRMGTRDVAAWTTVISAYVQTGRAKEAIEAFVRMLREESSVAASPNEYTY 282
Query: 235 LNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKC-GDLELARRVFDAVL 293
+I CA + + L +H+ + G+ + N LV++YT+ G L A VF +
Sbjct: 283 AAVIAACADIAWVCLGEQLHAQAARKGFACARSVANSLVTLYTRAAGCLSAADAVFRESV 342
Query: 294 EKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTS--VRPNEATLATTLSACAELGSLSKG 351
K V W+++I GYAQ G +A LF+ + S RPNE TLA+ LS CA SL G
Sbjct: 343 VKDVVSWSAIISGYAQEGLAEDAFALFREMRHHSGCPRPNEFTLASLLSVCATAASLDAG 402
Query: 352 KEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIH 411
+++ V GLE + ++++LI M+ K G + A VF D+ W+AMI GYA H
Sbjct: 403 RQLHTLAVAAGLEHHAMIRSALIDMYGKSGSMLDADIVFSHRVKDDVVSWTAMIVGYAEH 462
Query: 412 GMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIE 471
G +AL LF +M HV GLKPD V + +L+AC H+G V+ GL + M +G+ P+ E
Sbjct: 463 GHSKKALELFQEMCHV-GLKPDHVTFIGVLNACCHAGEVELGLRYLNEMNQIYGLYPAKE 521
Query: 472 HYLCLVDLLGRAGRFDLALKTIHEMPV-EVQAQVWAPLLSACMKHHNVELGEYAAKNLLT 530
HY C+VDLLGRAGR + A + I ++ E VW LL AC E G+ AA+ +
Sbjct: 522 HYGCVVDLLGRAGRINEAEELIGKIAANERDGVVWTSLLRACAARGEEETGKKAAERAME 581
Query: 531 LNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGS---VQVFVA 587
P G ++ MANL+ S G W EAA R +M + + K GWS + + G V VFVA
Sbjct: 582 AEPWGAGAHVAMANLYASKGQWHEAAQERHMMKQKGVVKGAGWSSITVGGEGRRVGVFVA 641
Query: 588 GDRSHHLSVDIRKTLKELHIKLLEAGYIAE 617
DR+H I + L+ ++ A Y+ +
Sbjct: 642 SDRTHPQDSAIYRMLELIYFGTGMARYVPD 671
Score = 166 bits (420), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 115/426 (26%), Positives = 209/426 (49%), Gaps = 17/426 (3%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
++ + T G E L +S M +GVH +S+ + L ACA+ + G+ VH+ K+G
Sbjct: 145 LVASLTRAGRRHEALRRFSEMRASGVHCDSYAYAAALTACADAGLLSRGREVHAFCAKLG 204
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+V L +Y++CSD + + M R V +W ++ISA+ + EAI
Sbjct: 205 LDSTPYVANTLATLYARCSDVDRALAAVSRMGT--RDVAAWTTVISAYVQTGRAKEAIEA 262
Query: 121 LKEMWVLGLELSAS----TFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVM 172
M ++AS T+ +V++ C+ G +H + G +ANS++
Sbjct: 263 FVRMLREESSVAASPNEYTYAAVIAACADIAWVCLGEQLHAQAARKGFACAR-SVANSLV 321
Query: 173 SMYAK-FGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMS--VTP 229
++Y + G ++ A ++F E +VSW+ II GY G +AF L +MR S P
Sbjct: 322 TLYTRAAGCLSAADAVFRESVVKDVVSWSAIISGYAQEGLAEDAFALFREMRHHSGCPRP 381
Query: 230 DLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVF 289
+ +L+ CA +L +H+L + +G + + + L+ MY K G + A VF
Sbjct: 382 NEFTLASLLSVCATAASLDAGRQLHTLAVAAGLEHHAMIRSALIDMYGKSGSMLDADIVF 441
Query: 290 DAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLS 349
++ V WT+MI GYA+ G+ +A+ LF+ + ++P+ T L+AC G +
Sbjct: 442 SHRVKDDVVSWTAMIVGYAEHGHSKKALELFQEMCHVGLKPDHVTFIGVLNACCHAGEVE 501
Query: 350 KG-KEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVP--DKDLAVWSAMIN 406
G + + E + GL ++ ++ + + GRIN+A+E+ ++ ++D VW++++
Sbjct: 502 LGLRYLNEMNQIYGLYPAKEHYGCVVDLLGRAGRINEAEELIGKIAANERDGVVWTSLLR 561
Query: 407 GYAIHG 412
A G
Sbjct: 562 ACAARG 567
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 108/429 (25%), Positives = 201/429 (46%), Gaps = 28/429 (6%)
Query: 76 SKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSAS- 134
++ S + ++ D MP R V++ ++++ H+ A A+ + + L+ +
Sbjct: 12 ARSSRLADAHRLFDGMP--RRDEVAYATLLAGHAAAGDFPGAMALFSRLRASSPPLAPAD 69
Query: 135 ------TFVSVVSGCSFR---QGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEAR 185
F S + R S+H + +++ + +A ++ +YAK G + A
Sbjct: 70 PFVLSLVFKSCAAAADARFLPHAASLHAFAVRSSAVSS-VFVATALADVYAKAGCLGLAL 128
Query: 186 SIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVG 245
+FDE+ ++VSWTT++ G +EA ++MR V D + + CA G
Sbjct: 129 KVFDEMPHKNVVSWTTLVASLTRAGRRHEALRRFSEMRASGVHCDSYAYAAALTACADAG 188
Query: 246 NLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIG 305
L +H+ K G ++ + N L ++Y +C D++ A + + V WT++I
Sbjct: 189 LLSRGREVHAFCAKLGLDSTPYVANTLATLYARCSDVDRALAAVSRMGTRDVAAWTTVIS 248
Query: 306 GYAQLGYPSEAVNLFKRLLK----TSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLN 361
Y Q G EA+ F R+L+ + PNE T A ++ACA++ + G+++
Sbjct: 249 AYVQTGRAKEAIEAFVRMLREESSVAASPNEYTYAAVIAACADIAWVCLGEQLHAQAARK 308
Query: 362 GLESNRQVQTSLIHMFSK-CGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNL 420
G R V SL+ ++++ G ++ A VF KD+ WSA+I+GYA G+ + A L
Sbjct: 309 GFACARSVANSLVTLYTRAAGCLSAADAVFRESVVKDVVSWSAIISGYAQEGLAEDAFAL 368
Query: 421 FYKMQHVEGL-KPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYL----C 475
F +M+H G +P+ S+LS C+ + +D G + +EH+
Sbjct: 369 FREMRHHSGCPRPNEFTLASLLSVCATAASLDAGRQLH-----TLAVAAGLEHHAMIRSA 423
Query: 476 LVDLLGRAG 484
L+D+ G++G
Sbjct: 424 LIDMYGKSG 432
>gi|296088715|emb|CBI38165.3| unnamed protein product [Vitis vinifera]
Length = 654
Score = 329 bits (844), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 211/634 (33%), Positives = 328/634 (51%), Gaps = 48/634 (7%)
Query: 29 NSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVL 88
NS F +L +C S + VH+ +L F + F+Q LID+Y KC +RK+
Sbjct: 14 NSSPFAKLLDSCLRSRSARGTRLVHARILMTQFSMEIFIQNRLIDVYGKCDCLDDARKLF 73
Query: 89 DEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEM-------W---VLGLE-------- 130
D MP R+ +WNS+IS +++ DEA + M W V G
Sbjct: 74 DRMP--QRNTFTWNSLISVLTKSGFLDEAARLFGSMPEPDQCSWNSMVSGFAQHDRFEES 131
Query: 131 -------------LSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMS 173
L+ +F S +S C+ G +H V K + ++ + ++++
Sbjct: 132 LEYFVKMHREDFLLNEYSFGSALSACAGLMDLNMGTQVHALVSK-SRYSTDVYMGSALID 190
Query: 174 MYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVV 233
MY+K G V A +F + E ++V+W ++I Y G +EA + +M + PD V
Sbjct: 191 MYSKCGSVACAEEVFSGMIERNLVTWNSLITCYEQNGPASEALEVFVRMMDSGLEPDEVT 250
Query: 234 FLNLILGCAQVGNLFLALSMHSLLLKSGYNNED-PLDNLLVSMYTKCGDLELARRVFDAV 292
+++ CA + L L +H+ ++K+ +D L N LV MY KC + ARRVFD +
Sbjct: 251 LASVVSACASLCALKEGLQIHARVVKTNKFRDDLVLGNALVDMYAKCSKVNEARRVFDRM 310
Query: 293 LEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLS-----ACAELGS 347
++V TSM+ GYA+ A +F ++ + +V A +A L
Sbjct: 311 SIRNVVSETSMVSGYARAASVKAARFMFSKMTQRNVVSWNALIAGYTQNGENEEALRLFR 370
Query: 348 LSKGKEI--EEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMI 405
L K + I Y N L+S+ V SLI M+ KCG I VFE++ ++D W+A+I
Sbjct: 371 LLKRESIWPTHYTFGNLLKSDIFVGNSLIDMYMKCGSIEDGSRVFEKMKERDCVSWNAII 430
Query: 406 NGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFG 465
GYA +G G +AL +F KM V G KPD V +L ACSH+G+V++G +F SM+ + G
Sbjct: 431 VGYAQNGYGAEALQIFRKML-VCGEKPDHVTMIGVLCACSHAGLVEEGRHYFFSMEEH-G 488
Query: 466 IEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAA 525
+ P +HY C+VDLLGRAG + A I MPV A VW LL+AC H N+E+G++AA
Sbjct: 489 LIPLKDHYTCMVDLLGRAGCLNEAKNLIEAMPVNPDAVVWGSLLAACKVHGNIEMGKHAA 548
Query: 526 KNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVF 585
+ LL ++P ++G Y+L++N++ G W + R LM + +TK+PG S +E++ V VF
Sbjct: 549 EKLLEIDPWNSGPYVLLSNMYAELGRWGDVVRVRKLMRQQGVTKQPGCSWIEVESRVHVF 608
Query: 586 VAGDRSHHLSVDIRKTLKELHIKLLEAGYIAEAD 619
+ D+SH I LK L ++ GYI +A+
Sbjct: 609 LVKDKSHPHRKQIYSVLKMLTEQMKRVGYIPDAN 642
Score = 206 bits (525), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 132/436 (30%), Positives = 223/436 (51%), Gaps = 25/436 (5%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
M+ + FEE+L + M + N ++F L ACA + + G +VH+ V K
Sbjct: 118 MVSGFAQHDRFEESLEYFVKMHREDFLLNEYSFGSALSACAGLMDLNMGTQVHALVSKSR 177
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+ D ++ + LIDMYSKC + +V M R++V+WNS+I+ + + EA+ V
Sbjct: 178 YSTDVYMGSALIDMYSKCGSVACAEEVFSGMIE--RNLVTWNSLITCYEQNGPASEALEV 235
Query: 121 LKEMWVLGLELSASTFVSVVSG----CSFRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
M GLE T SVVS C+ ++G+ +H V K +++ L N+++ MYA
Sbjct: 236 FVRMMDSGLEPDEVTLASVVSACASLCALKEGLQIHARVVKTNKFRDDLVLGNALVDMYA 295
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K KVNEAR +FD + ++VS T+++ GY +V A + ++M + +V V +
Sbjct: 296 KCSKVNEARRVFDRMSIRNVVSETSMVSGYARAASVKAARFMFSKMTQRNV----VSWNA 351
Query: 237 LILGCAQVGNLFLALSMHSLLLKSG-----------YNNEDPLDNLLVSMYTKCGDLELA 285
LI G Q G AL + LL + ++ + N L+ MY KCG +E
Sbjct: 352 LIAGYTQNGENEEALRLFRLLKRESIWPTHYTFGNLLKSDIFVGNSLIDMYMKCGSIEDG 411
Query: 286 RRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAEL 345
RVF+ + E+ W ++I GYAQ GY +EA+ +F+++L +P+ T+ L AC+
Sbjct: 412 SRVFEKMKERDCVSWNAIIVGYAQNGYGAEALQIFRKMLVCGEKPDHVTMIGVLCACSHA 471
Query: 346 GSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVP-DKDLAVWSAM 404
G + +G+ + +GL + T ++ + + G +N+AK + E +P + D VW ++
Sbjct: 472 GLVEEGRHYFFSMEEHGLIPLKDHYTCMVDLLGRAGCLNEAKNLIEAMPVNPDAVVWGSL 531
Query: 405 INGYAIHG---MGDQA 417
+ +HG MG A
Sbjct: 532 LAACKVHGNIEMGKHA 547
Score = 112 bits (280), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 77/302 (25%), Positives = 141/302 (46%), Gaps = 32/302 (10%)
Query: 229 PDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRV 288
P+ F L+ C + + +H+ +L + ++ E + N L+ +Y KC L+ AR++
Sbjct: 13 PNSSPFAKLLDSCLRSRSARGTRLVHARILMTQFSMEIFIQNRLIDVYGKCDCLDDARKL 72
Query: 289 FD--------------AVLEKSVFL-----------------WTSMIGGYAQLGYPSEAV 317
FD +VL KS FL W SM+ G+AQ E++
Sbjct: 73 FDRMPQRNTFTWNSLISVLTKSGFLDEAARLFGSMPEPDQCSWNSMVSGFAQHDRFEESL 132
Query: 318 NLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMF 377
F ++ + NE + + LSACA L L+ G ++ + + ++ + ++LI M+
Sbjct: 133 EYFVKMHREDFLLNEYSFGSALSACAGLMDLNMGTQVHALVSKSRYSTDVYMGSALIDMY 192
Query: 378 SKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVY 437
SKCG + A+EVF + +++L W+++I Y +G +AL +F +M GL+PD V
Sbjct: 193 SKCGSVACAEEVFSGMIERNLVTWNSLITCYEQNGPASEALEVFVRMMD-SGLEPDEVTL 251
Query: 438 TSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMP 497
S++SAC+ + +GL + + LVD+ + + + A + M
Sbjct: 252 ASVVSACASLCALKEGLQIHARVVKTNKFRDDLVLGNALVDMYAKCSKVNEARRVFDRMS 311
Query: 498 VE 499
+
Sbjct: 312 IR 313
>gi|357135382|ref|XP_003569289.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Brachypodium distachyon]
Length = 1054
Score = 329 bits (844), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 202/601 (33%), Positives = 339/601 (56%), Gaps = 19/601 (3%)
Query: 29 NSFTFPLVLKACANI----NSIWDGKRVHSHVLKVGF-QQDAFVQTGLIDMYSKCSDFVS 83
N+ TF ++L A A + + G+ VH H+L+ G + GL++MY+KC
Sbjct: 369 NTDTFVVLLSAVAEFSIPEDGLMRGREVHGHILRTGLIDLKIALSNGLVNMYAKCGAIDK 428
Query: 84 SRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGC 143
+ +V + R R VSWN+IIS + + A++ M + S +S +S C
Sbjct: 429 ASRVFRLLCARDR--VSWNTIISVLDQNGFCEGAMMNYCMMRQGCISPSNFAAISGLSSC 486
Query: 144 S----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSW 199
+ G +HC K GL + + ++N+++ MY G +E+ IF+ + E IVSW
Sbjct: 487 ASLRLLTAGQQVHCDAVKWGL-DLDTSVSNALVKMYGDCGARSESWEIFNSMAEHDIVSW 545
Query: 200 TTIIGGYVNV-GNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLL 258
+I+G V+ E+ + + M R +TP+ V F+NL+ + + L L +H+++L
Sbjct: 546 NSIMGVMVSSHAPTAESVEVFSNMMRSGLTPNKVTFVNLLSALSPLSVLELGKQVHAVVL 605
Query: 259 KSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVL-EKSVFLWTSMIGGYAQLGYPSEAV 317
K G ++ +DN L+S Y K GD++ ++F ++ + W SMI GY G+ E +
Sbjct: 606 KHGAIEDNAVDNALMSCYAKSGDMDSCEQLFSSMSGRRDAVSWNSMISGYIYNGHLQETM 665
Query: 318 NLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMF 377
+ ++ ++ + T + L+ACA + +L +G E+ + + + LES+ V+++L+ M+
Sbjct: 666 DCVWLMMHSNQMLDCCTFSIVLNACASVAALERGMEMHAFGIRSQLESDVVVESALLDMY 725
Query: 378 SKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVY 437
SKCGRI+ A +VF + K+ W++MI+GYA HG+G++AL +F +MQ G PD V +
Sbjct: 726 SKCGRIDYASKVFNSMSQKNEFSWNSMISGYARHGLGEKALEIFEEMQR-NGACPDHVTF 784
Query: 438 TSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMP 497
S+LSACSH+G+VD GL +F+ M+ + GI P IEHY C++DLLGRAG+ + I+ MP
Sbjct: 785 VSVLSACSHAGLVDRGLDYFEMME-DHGILPHIEHYSCVIDLLGRAGKLLKIQEYINRMP 843
Query: 498 VEVQAQVWAPLLSACMKHHN---VELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKE 554
++ +W +L AC + + ++LG+ A++ LL L P + NY+L +N + + G W++
Sbjct: 844 MKPNTLIWRTVLVACRQSKDGDRIDLGKEASRMLLELEPQNPVNYVLASNFYAATGRWED 903
Query: 555 AATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKELHIKLLEAGY 614
A AR M + KE G S V + V F+AGDRSH + +I + L L K+ AGY
Sbjct: 904 TAKARAAMGGAAMKKEAGQSWVTLGDGVHTFIAGDRSHPNTKEIYEKLNFLIQKIKNAGY 963
Query: 615 I 615
+
Sbjct: 964 V 964
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 112/409 (27%), Positives = 204/409 (49%), Gaps = 16/409 (3%)
Query: 7 NNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAF 66
NG E + Y M Q + ++F L +CA++ + G++VH +K G D
Sbjct: 453 QNGFCEGAMMNYCMMRQGCISPSNFAAISGLSSCASLRLLTAGQQVHCDAVKWGLDLDTS 512
Query: 67 VQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSI----ISAHSRACLNDEAILVLK 122
V L+ MY C S ++ + M +VSWNSI +S+H+ E++ V
Sbjct: 513 VSNALVKMYGDCGARSESWEIFNSMAEH--DIVSWNSIMGVMVSSHAPTA---ESVEVFS 567
Query: 123 EMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKF 178
M GL + TFV+++S S G +H V K G + + + N++MS YAK
Sbjct: 568 NMMRSGLTPNKVTFVNLLSALSPLSVLELGKQVHAVVLKHGAIEDN-AVDNALMSCYAKS 626
Query: 179 GKVNEARSIFDEI-GETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNL 237
G ++ +F + G VSW ++I GY+ G++ E M + D F +
Sbjct: 627 GDMDSCEQLFSSMSGRRDAVSWNSMISGYIYNGHLQETMDCVWLMMHSNQMLDCCTFSIV 686
Query: 238 ILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSV 297
+ CA V L + MH+ ++S ++ +++ L+ MY+KCG ++ A +VF+++ +K+
Sbjct: 687 LNACASVAALERGMEMHAFGIRSQLESDVVVESALLDMYSKCGRIDYASKVFNSMSQKNE 746
Query: 298 FLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEY 357
F W SMI GYA+ G +A+ +F+ + + P+ T + LSAC+ G + +G + E
Sbjct: 747 FSWNSMISGYARHGLGEKALEIFEEMQRNGACPDHVTFVSVLSACSHAGLVDRGLDYFEM 806
Query: 358 IVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDK-DLAVWSAMI 405
+ +G+ + + + +I + + G++ K +E R+P K + +W ++
Sbjct: 807 MEDHGILPHIEHYSCVIDLLGRAGKLLKIQEYINRMPMKPNTLIWRTVL 855
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 113/420 (26%), Positives = 195/420 (46%), Gaps = 32/420 (7%)
Query: 50 KRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHS 109
+R+H ++K G D F+ L+++Y+K S ++R+V D M R+ VSW ++S +
Sbjct: 76 ERLHLELVKRGLTHDLFLSNHLVNLYAKGSRLAAARQVFDGM--LERNAVSWTCLVSGYV 133
Query: 110 RACLNDEAILVLKEMWVLGLELSAS---TFVSVVSGCS------FRQGISMHCCVYKLGL 160
+ + DEA V K M G E S TF SV+ C + +H V K
Sbjct: 134 LSGITDEAFRVFKAMLWEGSEFSRPTPFTFGSVLRACQDAGPDLLAFAVQVHGLVSKTIY 193
Query: 161 LNNEIPLANSVMSMYAK--FGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGL 218
+N + N+++SMY G +A+ +FD +++W ++ Y G V F L
Sbjct: 194 ASNTT-VCNALISMYGNCSVGLPLQAQQVFDTTPVRDLITWNALMSVYAKKGYVVSTFTL 252
Query: 219 CNQM----RRMSVTPDLVVFLNLI----LGCAQVGNLFLALSMHSLLLKSGYNNEDPLDN 270
M + + P+ F +LI L G L + + +LKSG +++ + +
Sbjct: 253 FMAMLHDDSAIELRPNEHTFGSLITATSLSSCSSGVLD---QVFARVLKSGSSSDLYVGS 309
Query: 271 LLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRP 330
LVS + + G L+ A+ +F + E++ +I G + EAV +F + S
Sbjct: 310 ALVSAFARHGMLDEAKDIFINLKERNAVTLNGLIVGLVKQHCSEEAVGIFMG-TRDSFVV 368
Query: 331 NEATLATTLSACAELG----SLSKGKEIEEYIVLNGL-ESNRQVQTSLIHMFSKCGRINK 385
N T LSA AE L +G+E+ +I+ GL + + L++M++KCG I+K
Sbjct: 369 NTDTFVVLLSAVAEFSIPEDGLMRGREVHGHILRTGLIDLKIALSNGLVNMYAKCGAIDK 428
Query: 386 AKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACS 445
A VF + +D W+ +I+ +G + A+ + Y M + P S LS+C+
Sbjct: 429 ASRVFRLLCARDRVSWNTIISVLDQNGFCEGAM-MNYCMMRQGCISPSNFAAISGLSSCA 487
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 87/317 (27%), Positives = 161/317 (50%), Gaps = 17/317 (5%)
Query: 151 MHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVG 210
+H + K GL +++ L+N ++++YAK ++ AR +FD + E + VSWT ++ GYV G
Sbjct: 78 LHLELVKRGL-THDLFLSNHLVNLYAKGSRLAAARQVFDGMLERNAVSWTCLVSGYVLSG 136
Query: 211 NVNEAFGLCNQMRRMS---VTPDLVVFLNLILGCAQVGN--LFLALSMHSLLLKSGYNNE 265
+EAF + M P F +++ C G L A+ +H L+ K+ Y +
Sbjct: 137 ITDEAFRVFKAMLWEGSEFSRPTPFTFGSVLRACQDAGPDLLAFAVQVHGLVSKTIYASN 196
Query: 266 DPLDNLLVSMYTKCG-DLEL-ARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRL 323
+ N L+SMY C L L A++VFD + + W +++ YA+ GY LF +
Sbjct: 197 TTVCNALISMYGNCSVGLPLQAQQVFDTTPVRDLITWNALMSVYAKKGYVVSTFTLFMAM 256
Query: 324 LK----TSVRPNEATLATTLSACAELGSLSKG--KEIEEYIVLNGLESNRQVQTSLIHMF 377
L +RPNE T + ++A L S S G ++ ++ +G S+ V ++L+ F
Sbjct: 257 LHDDSAIELRPNEHTFGSLITA-TSLSSCSSGVLDQVFARVLKSGSSSDLYVGSALVSAF 315
Query: 378 SKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVY 437
++ G +++AK++F + +++ + +I G ++A+ +F + + D V
Sbjct: 316 ARHGMLDEAKDIFINLKERNAVTLNGLIVGLVKQHCSEEAVGIFMGTRDSFVVNTDTFVV 375
Query: 438 TSILSACSHSGMVDDGL 454
+LSA + + +DGL
Sbjct: 376 --LLSAVAEFSIPEDGL 390
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/144 (33%), Positives = 79/144 (54%), Gaps = 2/144 (1%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI NG +ET+ M+ + + TF +VL ACA++ ++ G +H+ ++
Sbjct: 651 MISGYIYNGHLQETMDCVWLMMHSNQMLDCCTFSIVLNACASVAALERGMEMHAFGIRSQ 710
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+ D V++ L+DMYSKC + KV + M ++ SWNS+IS ++R L ++A+ +
Sbjct: 711 LESDVVVESALLDMYSKCGRIDYASKVFNSM--SQKNEFSWNSMISGYARHGLGEKALEI 768
Query: 121 LKEMWVLGLELSASTFVSVVSGCS 144
+EM G TFVSV+S CS
Sbjct: 769 FEEMQRNGACPDHVTFVSVLSACS 792
>gi|357143265|ref|XP_003572861.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g01580-like [Brachypodium distachyon]
Length = 697
Score = 329 bits (844), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 189/588 (32%), Positives = 310/588 (52%), Gaps = 15/588 (2%)
Query: 26 VHGNSFTFPLVLKACANINSIWDGKRVHSHVLK-VGFQQDAFVQTGLIDMYSKCSDFVSS 84
V ++FT L+LKACA + ++ G+ +H+ ++ DAFV L+ MY+KC V S
Sbjct: 95 VRPDAFTLSLLLKACAMLPALAHGRALHALAIRSCTAYTDAFVAAALVHMYAKCRGMVGS 154
Query: 85 ---RKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWV-LGLELSASTFVSVV 140
E + LR+ S+++ + + + EA+ V G S T VSV+
Sbjct: 155 INAYNAFSEPDMVLRT-----SMVTGYEQNRMAAEALEFFSRHVVGQGFMPSPVTLVSVI 209
Query: 141 SGCSFRQGISMHCCVYKLGLLNN---EIPLANSVMSMYAKFGKVNEARSIFDEIGETSIV 197
S + + + + + NN ++ L N+++ Y + G V AR +F+ + E +V
Sbjct: 210 SAAAQLKDVLNGQACHAFVIRNNFEYDLVLVNAILGFYMRIGAVQAARRLFEGMTEKDVV 269
Query: 198 SWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLL 257
+W+ ++ GYV G++ EA +M + P+ V ++++ C+ ++ +H +
Sbjct: 270 TWSCMVTGYVQSGDICEALTAYKKMVEAGIKPNAVTVVSVVQACSLAPDIEEGRRVHDIA 329
Query: 258 LKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAV 317
+K G E + LV MY KC E A ++F + +K W +I G+ Q G P E++
Sbjct: 330 VKIGCELEMTVATALVDMYMKCSCHEEAMQLFCRMSKKDAVAWAVVISGFTQNGLPDESM 389
Query: 318 NLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMF 377
+FK +L P+ T+ L+AC+E G + + + Y+V+ G V +L+ ++
Sbjct: 390 RVFKCMLFGGPFPDAVTMVKVLAACSESGVMRQAFCLHGYLVITGFCDKIFVAAALVDLY 449
Query: 378 SKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVY 437
SKCG + A VFE +KD+ +WS+MI+GY +HG+G QA+ LF +M +KP+++ +
Sbjct: 450 SKCGNLGCAVRVFESAMEKDVVLWSSMISGYGVHGLGQQAVELF-QMMVASSVKPNSLTF 508
Query: 438 TSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMP 497
S+LSACSHSG+V +G F+SM +G+ P+ H+ +VDLLGRAG A K +H
Sbjct: 509 VSVLSACSHSGLVQEGKRIFESMTQVYGVVPNAVHHSAMVDLLGRAGELQEAAKLLHGNG 568
Query: 498 VEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAAT 557
A W LL+AC HH+ E+ E A LL L+P G Y L+ N++T W A
Sbjct: 569 -RADAHTWCALLAACRAHHDTEMSEVVAAKLLKLDPDHAGYYNLLNNIYTFDENWSSAKE 627
Query: 558 ARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKEL 605
R ++ DR L K PG S VE++ + F AG+R H I + L+E
Sbjct: 628 NRNIIRDRGLNKVPGCSAVELNNVMHTFTAGERPHKDWEKISRLLREF 675
Score = 118 bits (296), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 93/362 (25%), Positives = 169/362 (46%), Gaps = 12/362 (3%)
Query: 151 MHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVG 210
+H + + G L++ L + V++ Y AR +FDEI + ++ +V
Sbjct: 26 LHAHLLRSGHLHSSHHLTSHVLASY----PTGLARHLFDEIPVPTPRLANALLRAHVRAR 81
Query: 211 NVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDP-LD 269
+A L +R V PD L+ CA + L ++H+L ++S D +
Sbjct: 82 QWCDALLLIPCLR---VRPDAFTLSLLLKACAMLPALAHGRALHALAIRSCTAYTDAFVA 138
Query: 270 NLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKR-LLKTSV 328
LV MY KC + + ++A E + L TSM+ GY Q +EA+ F R ++
Sbjct: 139 AALVHMYAKCRGMVGSINAYNAFSEPDMVLRTSMVTGYEQNRMAAEALEFFSRHVVGQGF 198
Query: 329 RPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKE 388
P+ TL + +SA A+L + G+ +++ N E + + +++ + + G + A+
Sbjct: 199 MPSPVTLVSVISAAAQLKDVLNGQACHAFVIRNNFEYDLVLVNAILGFYMRIGAVQAARR 258
Query: 389 VFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSG 448
+FE + +KD+ WS M+ GY G +AL + KM G+KP+AV S++ ACS +
Sbjct: 259 LFEGMTEKDVVTWSCMVTGYVQSGDICEALTAYKKMVEA-GIKPNAVTVVSVVQACSLAP 317
Query: 449 MVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPL 508
+++G + G E + LVD+ + + A++ M + A WA +
Sbjct: 318 DIEEGRR-VHDIAVKIGCELEMTVATALVDMYMKCSCHEEAMQLFCRMS-KKDAVAWAVV 375
Query: 509 LS 510
+S
Sbjct: 376 IS 377
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 73/249 (29%), Positives = 127/249 (51%), Gaps = 7/249 (2%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
M+ +G E L+ Y M++ G+ N+ T V++AC+ I +G+RVH +K+G
Sbjct: 274 MVTGYVQSGDICEALTAYKKMVEAGIKPNAVTVVSVVQACSLAPDIEEGRRVHDIAVKIG 333
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+ + V T L+DMY KCS + ++ M + V+W +IS ++ L DE++ V
Sbjct: 334 CELEMTVATALVDMYMKCSCHEEAMQLFCRMSK--KDAVAWAVVISGFTQNGLPDESMRV 391
Query: 121 LKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
K M G A T V V++ CS RQ +H + G ++I +A +++ +Y+
Sbjct: 392 FKCMLFGGPFPDAVTMVKVLAACSESGVMRQAFCLHGYLVITGFC-DKIFVAAALVDLYS 450
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K G + A +F+ E +V W+++I GY G +A L M SV P+ + F++
Sbjct: 451 KCGNLGCAVRVFESAMEKDVVLWSSMISGYGVHGLGQQAVELFQMMVASSVKPNSLTFVS 510
Query: 237 LILGCAQVG 245
++ C+ G
Sbjct: 511 VLSACSHSG 519
>gi|48475127|gb|AAT44196.1| hypothetical protein, contains pentatricopeptide (PPR) repeat
[Oryza sativa Japonica Group]
gi|51854327|gb|AAU10708.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 634
Score = 329 bits (844), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 203/608 (33%), Positives = 317/608 (52%), Gaps = 22/608 (3%)
Query: 28 GNSFTFPLVLKACA---NINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSS 84
+ F LV K+CA + + +H+ ++ FV T L D+Y+K +
Sbjct: 17 ADPFVLSLVFKSCAAAADARFLPHAASLHAFAVRSSAVSSVFVATALADVYAKAGCLGLA 76
Query: 85 RKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCS 144
KV DEMP ++VVSW +++++ +RA EA+ EM G+ + + + ++ C+
Sbjct: 77 LKVFDEMP--HKNVVSWTTLVASLTRAGRRHEALRRFSEMRASGVHCDSYAYAAALTACA 134
Query: 145 ----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWT 200
+G +H KLGL ++ +AN++ ++YA+ V+ A + +G + +WT
Sbjct: 135 DAGLLSRGREVHAFCAKLGL-DSTPYVANTLATLYARCSDVDRALAAVSRMGTRDVAAWT 193
Query: 201 TIIGGYVNVGNVNEAFGLCNQMRR----MSVTPDLVVFLNLILGCAQVGNLFLALSMHSL 256
T+I YV G EA +M R ++ +P+ + +I CA + + L +H+
Sbjct: 194 TVISAYVQTGRAKEAIEAFVRMLREESSVAASPNEYTYAAVIAACADIAWVCLGEQLHAQ 253
Query: 257 LLKSGYNNEDPLDNLLVSMYTKC-GDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSE 315
+ G+ + N LV++YT+ G L A VF + K V W+++I GYAQ G +
Sbjct: 254 AARKGFACARSVANSLVTLYTRAAGCLSAADAVFRESVVKDVVSWSAIISGYAQEGLAED 313
Query: 316 AVNLFKRLLKTS--VRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSL 373
A LF+ + S RPNE TLA+ LS CA SL G+++ V GLE + ++++L
Sbjct: 314 AFALFREMRHHSGCPRPNEFTLASLLSVCATAASLDAGRQLHTLAVAAGLEHHAMIRSAL 373
Query: 374 IHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPD 433
I M+ K G + A VF D+ W+AMI GYA HG +AL LF +M HV GLKPD
Sbjct: 374 IDMYGKSGSMLDADIVFSHRVKDDVVSWTAMIVGYAEHGHSKKALELFQEMCHV-GLKPD 432
Query: 434 AVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTI 493
V + +L+AC H+G V+ GL + M +G+ P+ EHY C+VDLLGRAGR + A + I
Sbjct: 433 HVTFIGVLNACCHAGEVELGLRYLNEMNQIYGLYPAKEHYGCVVDLLGRAGRINEAEELI 492
Query: 494 HEMPV-EVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMW 552
++ E VW LL AC E G+ AA+ + P G ++ MANL+ S G W
Sbjct: 493 GKIAANERDGVVWTSLLRACAARGEEETGKKAAERAMEAEPWGAGAHVAMANLYASKGQW 552
Query: 553 KEAATARGLMDDRRLTKEPGWSQVEIDGS---VQVFVAGDRSHHLSVDIRKTLKELHIKL 609
EAA R +M + + K GWS + + G V VFVA DR+H I + L+ ++
Sbjct: 553 HEAAQERHMMKQKGVVKGAGWSSITVGGEGRRVGVFVASDRTHPQDSAIYRMLELIYFGT 612
Query: 610 LEAGYIAE 617
A Y+ +
Sbjct: 613 GMARYVPD 620
Score = 166 bits (420), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 115/426 (26%), Positives = 209/426 (49%), Gaps = 17/426 (3%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
++ + T G E L +S M +GVH +S+ + L ACA+ + G+ VH+ K+G
Sbjct: 94 LVASLTRAGRRHEALRRFSEMRASGVHCDSYAYAAALTACADAGLLSRGREVHAFCAKLG 153
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+V L +Y++CSD + + M R V +W ++ISA+ + EAI
Sbjct: 154 LDSTPYVANTLATLYARCSDVDRALAAVSRMGT--RDVAAWTTVISAYVQTGRAKEAIEA 211
Query: 121 LKEMWVLGLELSAS----TFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVM 172
M ++AS T+ +V++ C+ G +H + G +ANS++
Sbjct: 212 FVRMLREESSVAASPNEYTYAAVIAACADIAWVCLGEQLHAQAARKGFACAR-SVANSLV 270
Query: 173 SMYAK-FGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMS--VTP 229
++Y + G ++ A ++F E +VSW+ II GY G +AF L +MR S P
Sbjct: 271 TLYTRAAGCLSAADAVFRESVVKDVVSWSAIISGYAQEGLAEDAFALFREMRHHSGCPRP 330
Query: 230 DLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVF 289
+ +L+ CA +L +H+L + +G + + + L+ MY K G + A VF
Sbjct: 331 NEFTLASLLSVCATAASLDAGRQLHTLAVAAGLEHHAMIRSALIDMYGKSGSMLDADIVF 390
Query: 290 DAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLS 349
++ V WT+MI GYA+ G+ +A+ LF+ + ++P+ T L+AC G +
Sbjct: 391 SHRVKDDVVSWTAMIVGYAEHGHSKKALELFQEMCHVGLKPDHVTFIGVLNACCHAGEVE 450
Query: 350 KG-KEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVP--DKDLAVWSAMIN 406
G + + E + GL ++ ++ + + GRIN+A+E+ ++ ++D VW++++
Sbjct: 451 LGLRYLNEMNQIYGLYPAKEHYGCVVDLLGRAGRINEAEELIGKIAANERDGVVWTSLLR 510
Query: 407 GYAIHG 412
A G
Sbjct: 511 ACAARG 516
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 114/226 (50%), Gaps = 7/226 (3%)
Query: 227 VTPDLVVFLNLIL-GCAQVGNL-FL--ALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDL 282
+ P L+L+ CA + FL A S+H+ ++S + + L +Y K G L
Sbjct: 14 LAPADPFVLSLVFKSCAAAADARFLPHAASLHAFAVRSSAVSSVFVATALADVYAKAGCL 73
Query: 283 ELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSAC 342
LA +VFD + K+V WT+++ + G EA+ F + + V + A L+AC
Sbjct: 74 GLALKVFDEMPHKNVVSWTTLVASLTRAGRRHEALRRFSEMRASGVHCDSYAYAAALTAC 133
Query: 343 AELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWS 402
A+ G LS+G+E+ + GL+S V +L ++++C +++A R+ +D+A W+
Sbjct: 134 ADAGLLSRGREVHAFCAKLGLDSTPYVANTLATLYARCSDVDRALAAVSRMGTRDVAAWT 193
Query: 403 AMINGYAIHGMGDQALNLFYKMQHVE---GLKPDAVVYTSILSACS 445
+I+ Y G +A+ F +M E P+ Y ++++AC+
Sbjct: 194 TVISAYVQTGRAKEAIEAFVRMLREESSVAASPNEYTYAAVIAACA 239
>gi|224119830|ref|XP_002318172.1| predicted protein [Populus trichocarpa]
gi|222858845|gb|EEE96392.1| predicted protein [Populus trichocarpa]
Length = 617
Score = 329 bits (844), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 188/586 (32%), Positives = 324/586 (55%), Gaps = 19/586 (3%)
Query: 36 VLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRL 95
++K C + N + K++H+ +L + F+ + +ID+ D + V +++
Sbjct: 39 LIKQCKSKNLL---KQIHAQMLINSIPKPNFLLSKIIDL----KDLAYASLVFNQLTKP- 90
Query: 96 RSVVSWNSIISAHSRACLN-DEAILVLKEMWVLGLELSASTFVSVVSGCSFRQGISM--- 151
++ ++N ++ + D + + ++ LGL+ + T+ + C +G+
Sbjct: 91 -NIYAFNVMLRGLATTWKKYDFCVELYYKLKSLGLKANNFTYPFLFIACGNVRGLVHGKI 149
Query: 152 -HCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVG 210
HC V+K GL +E + +S+++MYA+ G++ AR +FDE+G+ +VSW ++I GY +G
Sbjct: 150 GHCLVFKAGLDGDEY-VNHSLITMYARCGEMGFARKVFDEMGDRDLVSWNSMISGYSKMG 208
Query: 211 NVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDN 270
EA GL +MR PD + ++++ C +G+L L + +L+ + +
Sbjct: 209 FTKEAIGLFMEMREEGFEPDEMTLVSVLGACGDLGDLGLGRWVEGFVLEKKMEVNSYMGS 268
Query: 271 LLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRP 330
L+ MY KCGDL ARRVFD++ K V W ++I GYAQ G +EA+ LF + + P
Sbjct: 269 ALIDMYGKCGDLISARRVFDSMPNKDVVTWNAIITGYAQNGASNEAIVLFNGMREAGPHP 328
Query: 331 NEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVF 390
+ T+ LSAC+ +G+L GK +E + GL+ + V ++LI M++KCG ++ A VF
Sbjct: 329 DRVTMIEVLSACSTIGALDLGKWVETHASEKGLQHDVYVASALIDMYAKCGSLDDAVRVF 388
Query: 391 ERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEG-LKPDAVVYTSILSACSHSGM 449
E +P K+ W+AMI+ A HG +AL+LF +M G ++P+ + + +LSAC H+G+
Sbjct: 389 ESMPHKNEVSWNAMISALAFHGQAQEALSLFRRMSKDNGTVQPNDITFIGVLSACVHAGL 448
Query: 450 VDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLL 509
VD+G F+SM +FG+ P +EHY C+VDL RAG A I +MP + V LL
Sbjct: 449 VDEGRQLFESMNLSFGLVPKVEHYSCMVDLCARAGLLYEAWDLIKKMPGKPDEIVLGSLL 508
Query: 510 SACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTK 569
AC + N ++GE + L + ++GNY++ + ++ + W ++A R LM ++K
Sbjct: 509 GACQRRRNADVGERVIQLFLEMELSNSGNYVISSKIYANMRRWDDSAKMRVLMRQCGVSK 568
Query: 570 EPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKELHIKLLEAGYI 615
PG S ++I V F AGD H+ S++I + L E ++ GYI
Sbjct: 569 TPGCSWIDIGAHVHEFHAGDSLHNHSMNIYQLLNE---EMKREGYI 611
Score = 204 bits (518), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 131/436 (30%), Positives = 223/436 (51%), Gaps = 13/436 (2%)
Query: 1 MIRN-STNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKV 59
M+R +T ++ + Y + G+ N+FT+P + AC N+ + GK H V K
Sbjct: 98 MLRGLATTWKKYDFCVELYYKLKSLGLKANNFTYPFLFIACGNVRGLVHGKIGHCLVFKA 157
Query: 60 GFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAIL 119
G D +V LI MY++C + +RKV DEM R +VSWNS+IS +S+ EAI
Sbjct: 158 GLDGDEYVNHSLITMYARCGEMGFARKVFDEMGD--RDLVSWNSMISGYSKMGFTKEAIG 215
Query: 120 VLKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGL---LNNEIPLANSVMSMYA 176
+ EM G E T VSV+ C + + V L + + ++++ MY
Sbjct: 216 LFMEMREEGFEPDEMTLVSVLGACGDLGDLGLGRWVEGFVLEKKMEVNSYMGSALIDMYG 275
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K G + AR +FD + +V+W II GY G NEA L N MR PD V +
Sbjct: 276 KCGDLISARRVFDSMPNKDVVTWNAIITGYAQNGASNEAIVLFNGMREAGPHPDRVTMIE 335
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
++ C+ +G L L + + + G ++ + + L+ MY KCG L+ A RVF+++ K+
Sbjct: 336 VLSACSTIGALDLGKWVETHASEKGLQHDVYVASALIDMYAKCGSLDDAVRVFESMPHKN 395
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKT--SVRPNEATLATTLSACAELGSLSKGKEI 354
W +MI A G EA++LF+R+ K +V+PN+ T LSAC G + +G+++
Sbjct: 396 EVSWNAMISALAFHGQAQEALSLFRRMSKDNGTVQPNDITFIGVLSACVHAGLVDEGRQL 455
Query: 355 EEYIVLN-GLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDK-DLAVWSAMINGYAIH- 411
E + L+ GL + + ++ + ++ G + +A ++ +++P K D V +++
Sbjct: 456 FESMNLSFGLVPKVEHYSCMVDLCARAGLLYEAWDLIKKMPGKPDEIVLGSLLGACQRRR 515
Query: 412 --GMGDQALNLFYKMQ 425
+G++ + LF +M+
Sbjct: 516 NADVGERVIQLFLEME 531
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 121/273 (44%), Gaps = 49/273 (17%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+I NG+ E + ++ M + G H + T VL AC+ I ++ GK V +H + G
Sbjct: 301 IITGYAQNGASNEAIVLFNGMREAGPHPDRVTMIEVLSACSTIGALDLGKWVETHASEKG 360
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
Q D +V + LIDMY+KC + +V + MP ++ VSWN++ISA + EA+ +
Sbjct: 361 LQHDVYVASALIDMYAKCGSLDDAVRVFESMP--HKNEVSWNAMISALAFHGQAQEALSL 418
Query: 121 LKEMWVLG--LELSASTFVSVVSGCSFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKF 178
+ M ++ + TF+ V+S C +H
Sbjct: 419 FRRMSKDNGTVQPNDITFIGVLSAC-------VHA------------------------- 446
Query: 179 GKVNEARSIFDEIGET-----SIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVV 233
G V+E R +F+ + + + ++ ++ G + EA+ L +++M PD +V
Sbjct: 447 GLVDEGRQLFESMNLSFGLVPKVEHYSCMVDLCARAGLLYEAWDL---IKKMPGKPDEIV 503
Query: 234 FLNLILGC-----AQVGNLFLALSMHSLLLKSG 261
+L+ C A VG + L + L SG
Sbjct: 504 LGSLLGACQRRRNADVGERVIQLFLEMELSNSG 536
>gi|297811443|ref|XP_002873605.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297319442|gb|EFH49864.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 750
Score = 329 bits (844), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 189/606 (31%), Positives = 320/606 (52%), Gaps = 11/606 (1%)
Query: 6 TNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDA 65
+ +G E + M + GV + +++ + +AC + S+ G+ +H+ +++G + +
Sbjct: 57 SKHGKLNEAFEFFQEMDKAGVSVSLYSYQCLFEACRELRSLSHGRLLHNR-MRMGIENPS 115
Query: 66 -FVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEM 124
+Q ++ MY +C + K+ DEM + VS ++ISA++ L D+A+ + M
Sbjct: 116 VLLQNCVLQMYCECGSLEDADKLFDEMSDL--NAVSRTTMISAYAEQGLLDKAVGLFSRM 173
Query: 125 WVLGLELSASTFV----SVVSGCSFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGK 180
G + +S + S+V+ + G +H V + GL +N + +++MY K G
Sbjct: 174 LESGDKPPSSMYTTLLKSLVNPRALDIGRQIHAHVIRAGLCSN-ASIETGIVNMYVKCGW 232
Query: 181 VNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILG 240
+ A+ +FD++ V+WT ++ GY G +A L + V D VF ++
Sbjct: 233 LVGAKRVFDQMAVKKPVAWTGLMVGYTQAGRARDALKLFVDLITEGVEWDSFVFSVVLKA 292
Query: 241 CAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLW 300
CA + L +H+ + K G E + LV Y KC E A R F + E + W
Sbjct: 293 CASLEELRFGKQIHACVAKLGLECEVSVGTPLVDFYIKCSSFESACRAFQEIREPNDVSW 352
Query: 301 TSMIGGYAQLGYPSEAVNLFKRLL-KTSVRPNEATLATTLSACAELGSLSKGKEIEEYIV 359
+++I GY Q+ EAV FK L K +V N T + AC+ L + G ++ +
Sbjct: 353 SAIISGYCQMSQFEEAVKTFKSLRSKNAVVLNSFTYTSIFQACSVLADCNIGGQVHADAI 412
Query: 360 LNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALN 419
L ++ +++LI M+SKCG ++ A EVFE + + D+ W+A I+G+A +G +AL
Sbjct: 413 KRSLIGSQYGESALITMYSKCGCLDDAHEVFESMDNPDIVAWTAFISGHAYYGNASEALR 472
Query: 420 LFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDL 479
LF KM G+KP++V + ++L+ACSH+G+V+ G + +M + + P+I+HY C++D+
Sbjct: 473 LFEKMVSC-GMKPNSVTFIAVLTACSHAGLVEQGKHYLDTMLRKYNVAPTIDHYDCMIDI 531
Query: 480 LGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNY 539
R+G D AL+ + MP E A W LS C H N+ELG+ A + L L+P T Y
Sbjct: 532 YARSGLLDEALRFMKNMPFEPDAMSWKCFLSGCWTHKNLELGKIAGEELRQLDPEDTAGY 591
Query: 540 ILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIR 599
+L NL+T AG W+EAA LM++R L KE S ++ G + F+ GD+ H S +I
Sbjct: 592 VLPFNLYTWAGKWEEAAEVMKLMNERMLKKELSCSWIQEKGKIHRFIVGDKHHPQSQEIY 651
Query: 600 KTLKEL 605
+ LKE
Sbjct: 652 EKLKEF 657
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 116/449 (25%), Positives = 215/449 (47%), Gaps = 42/449 (9%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI G ++ + +S ML++G S + +LK+ N ++ G+++H+HV++ G
Sbjct: 153 MISAYAEQGLLDKAVGLFSRMLESGDKPPSSMYTTLLKSLVNPRALDIGRQIHAHVIRAG 212
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+A ++TG+++MY KC V +++V D+M V + V+W ++ +++A +A+ +
Sbjct: 213 LCSNASIETGIVNMYVKCGWLVGAKRVFDQMAV--KKPVAWTGLMVGYTQAGRARDALKL 270
Query: 121 LKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
++ G+E + F V+ C+ R G +H CV KLG L E+ + ++ Y
Sbjct: 271 FVDLITEGVEWDSFVFSVVLKACASLEELRFGKQIHACVAKLG-LECEVSVGTPLVDFYI 329
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMR-RMSVTPDLVVFL 235
K A F EI E + VSW+ II GY + EA +R + +V + +
Sbjct: 330 KCSSFESACRAFQEIREPNDVSWSAIISGYCQMSQFEEAVKTFKSLRSKNAVVLNSFTYT 389
Query: 236 NLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEK 295
++ C+ + + + +H+ +K ++ L++MY+KCG L+ A VF+++
Sbjct: 390 SIFQACSVLADCNIGGQVHADAIKRSLIGSQYGESALITMYSKCGCLDDAHEVFESMDNP 449
Query: 296 SVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIE 355
+ WT+ I G+A G SEA+ LF++++ ++PN T L+AC+ G + +GK
Sbjct: 450 DIVAWTAFISGHAYYGNASEALRLFEKMVSCGMKPNSVTFIAVLTACSHAGLVEQGKH-- 507
Query: 356 EYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGD 415
L+ + V ++ H + MI+ YA G+ D
Sbjct: 508 ---YLDTMLRKYNVAPTIDH-------------------------YDCMIDIYARSGLLD 539
Query: 416 QALNLFYKMQHVEGLKPDAVVYTSILSAC 444
+AL M +PDA+ + LS C
Sbjct: 540 EALRFMKNMP----FEPDAMSWKCFLSGC 564
>gi|356528966|ref|XP_003533068.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930-like [Glycine max]
Length = 712
Score = 329 bits (844), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 194/620 (31%), Positives = 329/620 (53%), Gaps = 52/620 (8%)
Query: 36 VLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDM--YSKCSDFVSSRKVLDEMPV 93
+L+ C S++ K++HSH +K+G D Q +I + + +R+V D +P
Sbjct: 13 LLEKC---KSMYQLKQIHSHTIKMGLSSDPLFQKRVIAFCCAHESGKMIYARQVFDAIP- 68
Query: 94 RLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCSFRQGISMHC 153
++ WN++I +SR + + M ++ TF ++ G F + +++
Sbjct: 69 -QPTLFIWNTMIKGYSRINHPQNGVSMYLLMLASNIKPDRFTFPFLLKG--FTRNMALQ- 124
Query: 154 CVYKLGLLNNEIP--------LANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGG 205
Y LLN+ + + + + M++ V+ AR +FD +V+W ++ G
Sbjct: 125 --YGKVLLNHAVKHGFDSNLFVQKAFIHMFSLCRLVDLARKVFDMGDAWEVVTWNIMLSG 182
Query: 206 YVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNE 265
Y V ++ L +M + V+P+ V + ++ C+++ +L ++ +
Sbjct: 183 YNRVKQFKKSKMLFIEMEKRGVSPNSVTLVLMLSACSKLKDLEGGKHIYKYINGGIVERN 242
Query: 266 DPLDNLLVSMYTKCGDLE-------------------------------LARRVFDAVLE 294
L+N+L+ M+ CG+++ LAR+ FD + E
Sbjct: 243 LILENVLIDMFAACGEMDEAQSVFDNMKNRDVISWTSIVTGFANIGQIDLARKYFDQIPE 302
Query: 295 KSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEI 354
+ WT+MI GY ++ EA+ LF+ + ++V+P+E T+ + L+ACA LG+L G+ +
Sbjct: 303 RDYVSWTAMIDGYLRMNRFIEALALFREMQMSNVKPDEFTMVSILTACAHLGALELGEWV 362
Query: 355 EEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMG 414
+ YI N ++++ V +LI M+ KCG + KAK+VF+ + KD W+AMI G AI+G G
Sbjct: 363 KTYIDKNSIKNDTFVGNALIDMYFKCGNVGKAKKVFKEMHHKDKFTWTAMIVGLAINGHG 422
Query: 415 DQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYL 474
++AL +F M + PD + Y +L AC+H+GMV+ G SFF SM GI+P++ HY
Sbjct: 423 EEALAMFSNMIEA-SITPDEITYIGVLCACTHAGMVEKGQSFFISMTMQHGIKPNVTHYG 481
Query: 475 CLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPG 534
C+VDLLGRAGR + A + I MPV+ + VW LL AC H NV+L E AAK +L L P
Sbjct: 482 CMVDLLGRAGRLEEAHEVIVNMPVKPNSIVWGSLLGACRVHKNVQLAEMAAKQILELEPE 541
Query: 535 STGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHL 594
+ Y+L+ N++ + W+ R LM +R + K PG S +E++G+V FVAGD+SH
Sbjct: 542 NGAVYVLLCNIYAACKRWENLRQVRKLMMERGIKKTPGCSLMELNGNVYEFVAGDQSHPQ 601
Query: 595 SVDIRKTLKELHIKLLEAGY 614
S +I L+ + L++AGY
Sbjct: 602 SKEIYAKLENMMQDLIKAGY 621
Score = 192 bits (488), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 121/447 (27%), Positives = 222/447 (49%), Gaps = 38/447 (8%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI+ + + +S Y ML + + + FTFP +LK ++ GK + +H +K G
Sbjct: 78 MIKGYSRINHPQNGVSMYLLMLASNIKPDRFTFPFLLKGFTRNMALQYGKVLLNHAVKHG 137
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F + FVQ I M+S C +RKV D VV+WN ++S ++R ++ ++
Sbjct: 138 FDSNLFVQKAFIHMFSLCRLVDLARKVFDMGDA--WEVVTWNIMLSGYNRVKQFKKSKML 195
Query: 121 LKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKL---GLLNNEIPLANSVMSMYAK 177
EM G+ ++ T V ++S CS + + +YK G++ + L N ++ M+A
Sbjct: 196 FIEMEKRGVSPNSVTLVLMLSACSKLKDLEGGKHIYKYINGGIVERNLILENVLIDMFAA 255
Query: 178 FGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVN------------------------ 213
G+++EA+S+FD + ++SWT+I+ G+ N+G ++
Sbjct: 256 CGEMDEAQSVFDNMKNRDVISWTSIVTGFANIGQIDLARKYFDQIPERDYVSWTAMIDGY 315
Query: 214 -------EAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNED 266
EA L +M+ +V PD ++++ CA +G L L + + + K+ N+
Sbjct: 316 LRMNRFIEALALFREMQMSNVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNSIKNDT 375
Query: 267 PLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKT 326
+ N L+ MY KCG++ A++VF + K F WT+MI G A G+ EA+ +F +++
Sbjct: 376 FVGNALIDMYFKCGNVGKAKKVFKEMHHKDKFTWTAMIVGLAINGHGEEALAMFSNMIEA 435
Query: 327 SVRPNEATLATTLSACAELGSLSKGKEIEEYIVL-NGLESNRQVQTSLIHMFSKCGRINK 385
S+ P+E T L AC G + KG+ + + +G++ N ++ + + GR+ +
Sbjct: 436 SITPDEITYIGVLCACTHAGMVEKGQSFFISMTMQHGIKPNVTHYGCMVDLLGRAGRLEE 495
Query: 386 AKEVFERVPDK-DLAVWSAMINGYAIH 411
A EV +P K + VW +++ +H
Sbjct: 496 AHEVIVNMPVKPNSIVWGSLLGACRVH 522
Score = 141 bits (356), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 108/395 (27%), Positives = 182/395 (46%), Gaps = 39/395 (9%)
Query: 137 VSVVSGC-SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYA---KFGKVNEARSIFDEIG 192
+S++ C S Q +H K+GL ++ PL + + + GK+ AR +FD I
Sbjct: 11 ISLLEKCKSMYQLKQIHSHTIKMGLSSD--PLFQKRVIAFCCAHESGKMIYARQVFDAIP 68
Query: 193 ETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALS 252
+ ++ W T+I GY + + + M ++ PD F L+ G + L
Sbjct: 69 QPTLFIWNTMIKGYSRINHPQNGVSMYLLMLASNIKPDRFTFPFLLKGFTRNMALQYGKV 128
Query: 253 MHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGY 312
+ + +K G+++ + + M++ C ++LAR+VFD V W M+ GY ++
Sbjct: 129 LLNHAVKHGFDSNLFVQKAFIHMFSLCRLVDLARKVFDMGDAWEVVTWNIMLSGYNRVKQ 188
Query: 313 PSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTS 372
++ LF + K V PN TL LSAC++L L GK I +YI +E N ++
Sbjct: 189 FKKSKMLFIEMEKRGVSPNSVTLVLMLSACSKLKDLEGGKHIYKYINGGIVERNLILENV 248
Query: 373 LIHMFSKCGRINKAKEV-------------------------------FERVPDKDLAVW 401
LI MF+ CG +++A+ V F+++P++D W
Sbjct: 249 LIDMFAACGEMDEAQSVFDNMKNRDVISWTSIVTGFANIGQIDLARKYFDQIPERDYVSW 308
Query: 402 SAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQ 461
+AMI+GY +AL LF +MQ + +KPD SIL+AC+H G ++ G + K+
Sbjct: 309 TAMIDGYLRMNRFIEALALFREMQ-MSNVKPDEFTMVSILTACAHLGALELG-EWVKTYI 366
Query: 462 SNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEM 496
I+ L+D+ + G A K EM
Sbjct: 367 DKNSIKNDTFVGNALIDMYFKCGNVGKAKKVFKEM 401
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/257 (22%), Positives = 110/257 (42%), Gaps = 15/257 (5%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI F E L+ + M + V + FT +L ACA++ ++ G+ V +++ K
Sbjct: 311 MIDGYLRMNRFIEALALFREMQMSNVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNS 370
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+ D FV LIDMY KC + ++KV EM + +W ++I + +EA+ +
Sbjct: 371 IKNDTFVGNALIDMYFKCGNVGKAKKVFKEM--HHKDKFTWTAMIVGLAINGHGEEALAM 428
Query: 121 LKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
M + T++ V+ C+ +G S + + + ++ +
Sbjct: 429 FSNMIEASITPDEITYIGVLCACTHAGMVEKGQSFFISMTMQHGIKPNVTHYGCMVDLLG 488
Query: 177 KFGKVNEARSIFDE--IGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPD---- 230
+ G++ EA + + SIV W +++G NV A Q+ + + P+
Sbjct: 489 RAGRLEEAHEVIVNMPVKPNSIV-WGSLLGACRVHKNVQLAEMAAKQI--LELEPENGAV 545
Query: 231 LVVFLNLILGCAQVGNL 247
V+ N+ C + NL
Sbjct: 546 YVLLCNIYAACKRWENL 562
>gi|297831082|ref|XP_002883423.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297329263|gb|EFH59682.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 679
Score = 329 bits (844), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 171/536 (31%), Positives = 299/536 (55%), Gaps = 11/536 (2%)
Query: 86 KVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCS- 144
K L+ PV ++W S+I + L A+ EM G + F SV+ C+
Sbjct: 63 KTLESPPV-----LAWKSVIRCFTDQSLFSRALASFVEMRASGRCPDHNVFPSVLKSCTM 117
Query: 145 ---FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTT 201
R G S+H + +LG+ + ++ N++M+MY+K ++ R +F+ + +VS+ T
Sbjct: 118 MMDLRFGESVHGFIVRLGM-DCDLYTGNALMNMYSKLLGIDSVRKVFELMPRKDVVSYNT 176
Query: 202 IIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSG 261
+I GY G +A + +M + PD +++ ++ ++ +H +++ G
Sbjct: 177 VIAGYAQSGMYEDALRMVREMGTSDLKPDAFTLSSVLPIFSEYVDVLKGKEIHGYVIRKG 236
Query: 262 YNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFK 321
+++ + + LV MY K +E + RVF + + W S++ GY Q G +EA+ LF+
Sbjct: 237 IDSDVYIGSSLVDMYAKSARIEDSERVFSHLYRRDSISWNSLVAGYVQNGRYNEALRLFR 296
Query: 322 RLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCG 381
+++ VRP ++ + ACA L +L GK++ Y++ G N + ++L+ M+SKCG
Sbjct: 297 QMVSAKVRPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGRNIFIASALVDMYSKCG 356
Query: 382 RINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSIL 441
I A+++F+R+ D W+A+I G+A+HG G +A++LF +M+ +G+KP+ V + ++L
Sbjct: 357 NIQAARKIFDRMNLHDEVSWTAIIMGHALHGHGHEAVSLFEEMKR-QGVKPNQVAFVAVL 415
Query: 442 SACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQ 501
+ACSH G+VD+ +F SM +G+ +EHY + DLLGRAG+ + A I +M VE
Sbjct: 416 TACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYDFISKMRVEPT 475
Query: 502 AQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGL 561
VW+ LLS+C H N+EL E A+ + T++ + G Y+LM N++ S G WKE A R
Sbjct: 476 GSVWSTLLSSCSVHKNLELAEKVAEKIFTIDSENMGAYVLMCNMYASNGRWKEMAKLRLR 535
Query: 562 MDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKELHIKLLEAGYIAE 617
+ + L K+P S +E+ FV+GDRSH I + LK + ++ + GY+A+
Sbjct: 536 VRKKGLRKKPACSWIEMKNKTHGFVSGDRSHPSMDRINEFLKAVMEQMEKEGYVAD 591
Score = 199 bits (506), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 114/417 (27%), Positives = 223/417 (53%), Gaps = 9/417 (2%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+IR T+ F L+++ M +G + FP VLK+C + + G+ VH ++++G
Sbjct: 76 VIRCFTDQSLFSRALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLG 135
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
D + L++MYSK S RKV + MP + VVS+N++I+ ++++ + ++A+ +
Sbjct: 136 MDCDLYTGNALMNMYSKLLGIDSVRKVFELMP--RKDVVSYNTVIAGYAQSGMYEDALRM 193
Query: 121 LKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
++EM L+ A T SV+ S +G +H V + G +++++ + +S++ MYA
Sbjct: 194 VREMGTSDLKPDAFTLSSVLPIFSEYVDVLKGKEIHGYVIRKG-IDSDVYIGSSLVDMYA 252
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K ++ ++ +F + +SW +++ GYV G NEA L QM V P V F +
Sbjct: 253 KSARIEDSERVFSHLYRRDSISWNSLVAGYVQNGRYNEALRLFRQMVSAKVRPGAVAFSS 312
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
+I CA + L L +H +L+ G+ + + LV MY+KCG+++ AR++FD +
Sbjct: 313 VIPACAHLATLHLGKQLHGYVLRGGFGRNIFIASALVDMYSKCGNIQAARKIFDRMNLHD 372
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKG-KEIE 355
WT++I G+A G+ EAV+LF+ + + V+PN+ L+AC+ +G + +
Sbjct: 373 EVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFN 432
Query: 356 EYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVP-DKDLAVWSAMINGYAIH 411
+ GL + ++ + + G++ +A + ++ + +VWS +++ ++H
Sbjct: 433 SMTKVYGLNQELEHYAAVADLLGRAGKLEEAYDFISKMRVEPTGSVWSTLLSSCSVH 489
Score = 149 bits (376), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 90/353 (25%), Positives = 181/353 (51%), Gaps = 4/353 (1%)
Query: 168 ANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSV 227
A+ V+S+Y ++EA +F + +++W ++I + + + A +MR
Sbjct: 42 ASIVISIYTNLKLLHEALLVFKTLESPPVLAWKSVIRCFTDQSLFSRALASFVEMRASGR 101
Query: 228 TPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARR 287
PD VF +++ C + +L S+H +++ G + + N L++MY+K ++ R+
Sbjct: 102 CPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGNALMNMYSKLLGIDSVRK 161
Query: 288 VFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGS 347
VF+ + K V + ++I GYAQ G +A+ + + + + ++P+ TL++ L +E
Sbjct: 162 VFELMPRKDVVSYNTVIAGYAQSGMYEDALRMVREMGTSDLKPDAFTLSSVLPIFSEYVD 221
Query: 348 LSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMING 407
+ KGKEI Y++ G++S+ + +SL+ M++K RI ++ VF + +D W++++ G
Sbjct: 222 VLKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSHLYRRDSISWNSLVAG 281
Query: 408 YAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKS-MQSNFGI 466
Y +G ++AL LF +M + ++P AV ++S++ AC+H + G ++ FG
Sbjct: 282 YVQNGRYNEALRLFRQMVSAK-VRPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGR 340
Query: 467 EPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVE 519
I LVD+ + G A K M + + A ++ + H E
Sbjct: 341 NIFIAS--ALVDMYSKCGNIQAARKIFDRMNLHDEVSWTAIIMGHALHGHGHE 391
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 120/250 (48%), Gaps = 32/250 (12%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
++ NG + E L + M+ V + F V+ ACA++ ++ GK++H +VL+ G
Sbjct: 278 LVAGYVQNGRYNEALRLFRQMVSAKVRPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGG 337
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F ++ F+ + L+DMYSKC + ++RK+ D M L VSW +II H+ EA+ +
Sbjct: 338 FGRNIFIASALVDMYSKCGNIQAARKIFDRM--NLHDEVSWTAIIMGHALHGHGHEAVSL 395
Query: 121 LKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGK 180
+EM G++ + FV+V++ CS +GL++ NS+ +Y +
Sbjct: 396 FEEMKRQGVKPNQVAFVAVLTACS------------HVGLVDEAWGYFNSMTKVYGLNQE 443
Query: 181 VNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILG 240
+ ++ D +G G + EA+ ++MR V P V+ L+
Sbjct: 444 LEHYAAVADLLGRA---------------GKLEEAYDFISKMR---VEPTGSVWSTLLSS 485
Query: 241 CAQVGNLFLA 250
C+ NL LA
Sbjct: 486 CSVHKNLELA 495
>gi|357454909|ref|XP_003597735.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|87240430|gb|ABD32288.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355486783|gb|AES67986.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 620
Score = 329 bits (843), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 169/484 (34%), Positives = 277/484 (57%), Gaps = 3/484 (0%)
Query: 134 STFVSVVSGCSFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGE 193
S S + + G +H Y LG+ N+ LA ++ +YA + AR++FD+I +
Sbjct: 52 SLLQSCIDSKALNPGKQLHAQFYHLGIAYNQ-DLATKLVHLYAVSNSLLNARNLFDKIPK 110
Query: 194 TSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSM 253
++ W +I GY G + A L ++M + PD ++ C+ + + S+
Sbjct: 111 QNLFLWNVLIRGYAWNGPHDNAIILYHKMLDYGLRPDNFTLPFVLKACSALSAIGEGRSI 170
Query: 254 HSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYP 313
H ++KSG+ + + L+ MY KCG + A RVFD ++ + LW SM+ YAQ G+P
Sbjct: 171 HEYVIKSGWERDLFVGAALIDMYAKCGCVMDAGRVFDKIVVRDAVLWNSMLAAYAQNGHP 230
Query: 314 SEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSL 373
E+++L + + VRP EATL T +S+ A++ L G+EI + +G +SN +V+T+L
Sbjct: 231 DESISLCREMAANGVRPTEATLVTVISSSADVACLPYGREIHGFGWRHGFQSNDKVKTAL 290
Query: 374 IHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPD 433
I M++KCG + A +FER+ +K + W+A+I GYA+HG+ AL+LF KM+ + +PD
Sbjct: 291 IDMYAKCGSVKVALALFERLREKRVVSWNAIITGYAMHGLAVGALDLFDKMRKED--RPD 348
Query: 434 AVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTI 493
+ + +L+ACS ++D+G + + M ++GI P+++HY C++DLLG G+ D A I
Sbjct: 349 HITFVGVLAACSRGRLLDEGRALYNLMVRDYGITPTVQHYTCMIDLLGHCGQLDEAYDLI 408
Query: 494 HEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWK 553
M V+ + VW LL++C H NVEL E A + L+ L P +GNY+++AN++ +G W+
Sbjct: 409 RNMSVKPDSGVWGALLNSCKIHGNVELAELALEKLIELEPDDSGNYVILANMYAQSGKWE 468
Query: 554 EAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKELHIKLLEAG 613
R +M D+R+ K S +E+ V F+AGD SH S I LK L + EAG
Sbjct: 469 GVEKLRQVMIDKRIKKNIACSWIEVKNKVYAFLAGDVSHSNSDAIYAELKRLEGLMHEAG 528
Query: 614 YIAE 617
Y +
Sbjct: 529 YAPD 532
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 109/407 (26%), Positives = 203/407 (49%), Gaps = 13/407 (3%)
Query: 12 EETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGL 71
+T S S Q H + + +L++C + ++ GK++H+ +G + + T L
Sbjct: 32 HQTASVDSFPPQPTTH---YGYTSLLQSCIDSKALNPGKQLHAQFYHLGIAYNQDLATKL 88
Query: 72 IDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLEL 131
+ +Y+ + +++R + D++P +++ WN +I ++ +D AI++ +M GL
Sbjct: 89 VHLYAVSNSLLNARNLFDKIPK--QNLFLWNVLIRGYAWNGPHDNAIILYHKMLDYGLRP 146
Query: 132 SASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSI 187
T V+ CS +G S+H V K G ++ + +++ MYAK G V +A +
Sbjct: 147 DNFTLPFVLKACSALSAIGEGRSIHEYVIKSG-WERDLFVGAALIDMYAKCGCVMDAGRV 205
Query: 188 FDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNL 247
FD+I V W +++ Y G+ +E+ LC +M V P + +I A V L
Sbjct: 206 FDKIVVRDAVLWNSMLAAYAQNGHPDESISLCREMAANGVRPTEATLVTVISSSADVACL 265
Query: 248 FLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGY 307
+H + G+ + D + L+ MY KCG +++A +F+ + EK V W ++I GY
Sbjct: 266 PYGREIHGFGWRHGFQSNDKVKTALIDMYAKCGSVKVALALFERLREKRVVSWNAIITGY 325
Query: 308 AQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLN-GLESN 366
A G A++LF ++ K RP+ T L+AC+ L +G+ + +V + G+
Sbjct: 326 AMHGLAVGALDLFDKMRKED-RPDHITFVGVLAACSRGRLLDEGRALYNLMVRDYGITPT 384
Query: 367 RQVQTSLIHMFSKCGRINKAKEVFERVPDK-DLAVWSAMINGYAIHG 412
Q T +I + CG++++A ++ + K D VW A++N IHG
Sbjct: 385 VQHYTCMIDLLGHCGQLDEAYDLIRNMSVKPDSGVWGALLNSCKIHG 431
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 121/448 (27%), Positives = 220/448 (49%), Gaps = 53/448 (11%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+IR NG + + Y ML G+ ++FT P VLKAC+ +++I +G+ +H +V+K G
Sbjct: 119 LIRGYAWNGPHDNAIILYHKMLDYGLRPDNFTLPFVLKACSALSAIGEGRSIHEYVIKSG 178
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+++D FV LIDMY+KC + + +V D++ V R V WNS+++A+++ DE+I +
Sbjct: 179 WERDLFVGAALIDMYAKCGCVMDAGRVFDKIVV--RDAVLWNSMLAAYAQNGHPDESISL 236
Query: 121 LKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
+EM G+ + +T V+V+S + G +H ++ G +N+ + +++ MYA
Sbjct: 237 CREMAANGVRPTEATLVTVISSSADVACLPYGREIHGFGWRHGFQSND-KVKTALIDMYA 295
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K G V A ++F+ + E +VSW II GY G A L ++MR+ PD + F+
Sbjct: 296 KCGSVKVALALFERLREKRVVSWNAIITGYAMHGLAVGALDLFDKMRKED-RPDHITFVG 354
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
++ C++ LL G L NL+V Y + +
Sbjct: 355 VLAACSR-----------GRLLDEG----RALYNLMVRDYG---------------ITPT 384
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGK-EIE 355
V +T MI G EA +L + + SV+P+ L++C G++ + +E
Sbjct: 385 VQHYTCMIDLLGHCGQLDEAYDLIRNM---SVKPDSGVWGALLNSCKIHGNVELAELALE 441
Query: 356 EYIVLNGLESNRQVQTSLIHMFSKCGR---INKAKEVF--ERVPDKDLAVWSAMINGYAI 410
+ I L +S V L +M+++ G+ + K ++V +R+ W + N
Sbjct: 442 KLIELEPDDSGNYV--ILANMYAQSGKWEGVEKLRQVMIDKRIKKNIACSWIEVKNKVYA 499
Query: 411 HGMGDQALN----LFYKMQHVEGLKPDA 434
GD + + ++ +++ +EGL +A
Sbjct: 500 FLAGDVSHSNSDAIYAELKRLEGLMHEA 527
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 141/287 (49%), Gaps = 13/287 (4%)
Query: 234 FLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVL 293
+ +L+ C L +H+ G L LV +Y L AR +FD +
Sbjct: 50 YTSLLQSCIDSKALNPGKQLHAQFYHLGIAYNQDLATKLVHLYAVSNSLLNARNLFDKIP 109
Query: 294 EKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKE 353
++++FLW +I GYA G A+ L+ ++L +RP+ TL L AC+ L ++ +G+
Sbjct: 110 KQNLFLWNVLIRGYAWNGPHDNAIILYHKMLDYGLRPDNFTLPFVLKACSALSAIGEGRS 169
Query: 354 IEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGM 413
I EY++ +G E + V +LI M++KCG + A VF+++ +D +W++M+ YA +G
Sbjct: 170 IHEYVIKSGWERDLFVGAALIDMYAKCGCVMDAGRVFDKIVVRDAVLWNSMLAAYAQNGH 229
Query: 414 GDQALNLFYKMQHVEGLKPDAVVYTSILS-----ACSHSGMVDDGLSFFKSMQSNFGIEP 468
D++++L +M G++P +++S AC G G + QSN ++
Sbjct: 230 PDESISLCREMA-ANGVRPTEATLVTVISSSADVACLPYGREIHGFGWRHGFQSNDKVKT 288
Query: 469 SIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKH 515
+ L+D+ + G +AL + E E + W +++ H
Sbjct: 289 A------LIDMYAKCGSVKVAL-ALFERLREKRVVSWNAIITGYAMH 328
>gi|449460752|ref|XP_004148109.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39952,
mitochondrial-like [Cucumis sativus]
Length = 784
Score = 329 bits (843), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 179/550 (32%), Positives = 302/550 (54%), Gaps = 22/550 (4%)
Query: 37 LKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLR 96
+AC +++++ +GK +H LK GF V++ ++ MYS+C + + ++ +
Sbjct: 247 FQACVDLDALVEGKCLHGLALKNGFLCFEVVKSTILSMYSRCGSPEEAYRCFCKLDQK-- 304
Query: 97 SVVSWNSIISAHSRACLNDEAILVLKEMW---VLGLELSASTFV-------SVVSGCSFR 146
++SW SII+ HS+ L E + + EM ++ E+ S + + G +F
Sbjct: 305 DLISWTSIIAVHSKFGLMSECLHLFWEMQASEIIPDEIVISCMLMGFGNSDRIFEGKAFH 364
Query: 147 QGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGY 206
I CC G+ +N +++SMY KFG + A IF ++S W+T+I GY
Sbjct: 365 ARILKQCCALS-GITHN------ALLSMYCKFGHLGTANKIFHSFHKSS-EDWSTMILGY 416
Query: 207 VNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNED 266
N+G + +M + PDL +++I C+QVG + + S+H +K+
Sbjct: 417 SNMGQKEKCISFLREMLLLGREPDLNSLVSVISSCSQVGAINIGRSIHCYAIKNSIIENV 476
Query: 267 PLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKT 326
+ N L+ MY K G + R+F L++ V W ++I Y Q G +EA+ LF +++K
Sbjct: 477 SVANSLMDMYGKSGHVTATWRIFHRTLQRDVISWNTLISSYKQSGILAEAIILFDKMVKE 536
Query: 327 SVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKA 386
V PN+ T LSACA L SL +G++I +YI NG ESN ++T+LI M++KCG + +
Sbjct: 537 KVYPNKVTCIIVLSACAHLASLDEGEKIHQYIKENGFESNITIRTALIDMYAKCGELETS 596
Query: 387 KEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSH 446
+++F ++D+ +W+ MI+ Y +HG + A+ +F M+ +KP+A + S+LSAC+H
Sbjct: 597 RKLFNSTEERDVILWNVMISNYGMHGHVESAMEIFQLMEE-SNIKPNAQTFLSLLSACNH 655
Query: 447 SGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWA 506
+G V +G F MQ +GIEPS++HY ++DLLGR+G + A + MP+ VW
Sbjct: 656 TGHVLEGRHLFDRMQ-KYGIEPSLKHYASIIDLLGRSGSLEAAEALVLSMPITPDGTVWG 714
Query: 507 PLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRR 566
LLSAC H+ E+G A+ + +P + G YI++++L++ G W E R +M R
Sbjct: 715 SLLSACKIHNEFEVGVRLARYAIESDPKNDGYYIILSDLYSCLGRWDEVEKVRDMMKKRG 774
Query: 567 LTKEPGWSQV 576
+ K GWS +
Sbjct: 775 VEKRAGWSAL 784
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 138/524 (26%), Positives = 257/524 (49%), Gaps = 12/524 (2%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+I++ +NG ++ Y M + N FT P+V+ CA + G +H K+G
Sbjct: 109 IIQSHFSNGDYQRAFDFYLQMRASSSLPNQFTVPMVVSTCAELMMFNHGMNIHGLTSKLG 168
Query: 61 -FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAIL 119
F ++ + + I MYSKC S+ + E+ V + VV+W ++I + + + +
Sbjct: 169 LFVGNSAIGSSFIYMYSKCGHVESASIMFSEITV--KDVVTWTALIVGYVQNNESGRGLK 226
Query: 120 VLKEMWVLGLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMY 175
L EM +G + T S C + +G +H K G L E+ + ++++SMY
Sbjct: 227 CLFEMHRIGGTPNYKTIGSGFQACVDLDALVEGKCLHGLALKNGFLCFEV-VKSTILSMY 285
Query: 176 AKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFL 235
++ G EA F ++ + ++SWT+II + G ++E L +M+ + PD +V
Sbjct: 286 SRCGSPEEAYRCFCKLDQKDLISWTSIIAVHSKFGLMSECLHLFWEMQASEIIPDEIVIS 345
Query: 236 NLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEK 295
+++G +F + H+ +LK N L+SMY K G L A ++F + K
Sbjct: 346 CMLMGFGNSDRIFEGKAFHARILKQCCALSGITHNALLSMYCKFGHLGTANKIFHS-FHK 404
Query: 296 SVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIE 355
S W++MI GY+ +G + ++ + +L P+ +L + +S+C+++G+++ G+ I
Sbjct: 405 SSEDWSTMILGYSNMGQKEKCISFLREMLLLGREPDLNSLVSVISSCSQVGAINIGRSIH 464
Query: 356 EYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGD 415
Y + N + N V SL+ M+ K G + +F R +D+ W+ +I+ Y G+
Sbjct: 465 CYAIKNSIIENVSVANSLMDMYGKSGHVTATWRIFHRTLQRDVISWNTLISSYKQSGILA 524
Query: 416 QALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLC 475
+A+ LF KM E + P+ V +LSAC+H +D+G + ++ N G E +I
Sbjct: 525 EAIILFDKMVK-EKVYPNKVTCIIVLSACAHLASLDEGEKIHQYIKEN-GFESNITIRTA 582
Query: 476 LVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVE 519
L+D+ + G + + K + E +W ++S H +VE
Sbjct: 583 LIDMYAKCGELETSRKLFNSTE-ERDVILWNVMISNYGMHGHVE 625
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 117/465 (25%), Positives = 206/465 (44%), Gaps = 10/465 (2%)
Query: 51 RVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSR 110
+ HS ++ G + F T L+ Y+ S + + + + WNSII +H
Sbjct: 58 QFHSLIITTGNSNNVFFATKLMAFYAYHRKPAFSTHLFR--LIHSKDIFLWNSIIQSHFS 115
Query: 111 ACLNDEAILVLKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIP 166
A +M + T VVS C+ F G+++H KLGL
Sbjct: 116 NGDYQRAFDFYLQMRASSSLPNQFTVPMVVSTCAELMMFNHGMNIHGLTSKLGLFVGNSA 175
Query: 167 LANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMS 226
+ +S + MY+K G V A +F EI +V+WT +I GYV +M R+
Sbjct: 176 IGSSFIYMYSKCGHVESASIMFSEITVKDVVTWTALIVGYVQNNESGRGLKCLFEMHRIG 235
Query: 227 VTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELAR 286
TP+ + C + L +H L LK+G+ + + + ++SMY++CG E A
Sbjct: 236 GTPNYKTIGSGFQACVDLDALVEGKCLHGLALKNGFLCFEVVKSTILSMYSRCGSPEEAY 295
Query: 287 RVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELG 346
R F + +K + WTS+I +++ G SE ++LF + + + P+E ++ L
Sbjct: 296 RCFCKLDQKDLISWTSIIAVHSKFGLMSECLHLFWEMQASEIIPDEIVISCMLMGFGNSD 355
Query: 347 SLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMIN 406
+ +GK I+ + +L+ M+ K G + A ++F K WS MI
Sbjct: 356 RIFEGKAFHARILKQCCALSGITHNALLSMYCKFGHLGTANKIFHSF-HKSSEDWSTMIL 414
Query: 407 GYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGI 466
GY+ G ++ ++ +M + G +PD S++S+CS G ++ G S N I
Sbjct: 415 GYSNMGQKEKCISFLREML-LLGREPDLNSLVSVISSCSQVGAINIGRSIHCYAIKNSII 473
Query: 467 EPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSA 511
E ++ L+D+ G++G + H ++ W L+S+
Sbjct: 474 E-NVSVANSLMDMYGKSGHVTATWRIFHR-TLQRDVISWNTLISS 516
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 91/195 (46%), Gaps = 2/195 (1%)
Query: 251 LSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQL 310
L HSL++ +G +N L++ Y + +F + K +FLW S+I +
Sbjct: 57 LQFHSLIITTGNSNNVFFATKLMAFYAYHRKPAFSTHLFRLIHSKDIFLWNSIIQSHFSN 116
Query: 311 GYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGL-ESNRQV 369
G A + + ++ +S PN+ T+ +S CAEL + G I GL N +
Sbjct: 117 GDYQRAFDFYLQMRASSSLPNQFTVPMVVSTCAELMMFNHGMNIHGLTSKLGLFVGNSAI 176
Query: 370 QTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEG 429
+S I+M+SKCG + A +F + KD+ W+A+I GY + + L ++M + G
Sbjct: 177 GSSFIYMYSKCGHVESASIMFSEITVKDVVTWTALIVGYVQNNESGRGLKCLFEMHRIGG 236
Query: 430 LKPDAVVYTSILSAC 444
P+ S AC
Sbjct: 237 -TPNYKTIGSGFQAC 250
>gi|147832325|emb|CAN66581.1| hypothetical protein VITISV_030261 [Vitis vinifera]
Length = 622
Score = 329 bits (843), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 187/522 (35%), Positives = 295/522 (56%), Gaps = 36/522 (6%)
Query: 127 LGLELSASTFVSVVSGCSFRQGI-SMHCCVYKLGLLNNEIPLANSVMSMYA--KFGKVNE 183
L E +A+ + ++ CS + + +H + K GL+ +EIP A+ +++ A G +
Sbjct: 12 LSSESNAAQTLHLLQRCSNMEELRQIHGQMLKTGLILDEIP-ASKLLAFCASPNSGSLAY 70
Query: 184 ARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQ 243
AR++FD I + W T+I GY N EA L + M SV + F L+ C+
Sbjct: 71 ARTVFDRIFRPNTFMWNTMIRGYSNSKEPEEALLLYHHMLYHSVPHNAYTFPFLLKACSS 130
Query: 244 VGNLFLALSMHSLLLKSGYNNE------------------------DPLD-------NLL 272
+ +H+ ++K G+ +E D +D N +
Sbjct: 131 MSASEETQQIHAHIIKMGFGSEIYTTNSLLNVYSKSGDIKSARLLFDQVDQRDTVSWNSM 190
Query: 273 VSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNE 332
+ YTKCG++E+A +F+ + E+++ WTSMI G G P EA+NLF R+ ++ +
Sbjct: 191 IDGYTKCGEIEMAYEIFNHMPERNIISWTSMISGCVGAGKPKEALNLFHRMQTAGIKLDN 250
Query: 333 ATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFER 392
L +TL ACA+LG L +GK I YI + +E + + LI M++KCG + +A EVF +
Sbjct: 251 VALVSTLQACADLGVLDQGKWIHAYIKKHEIEIDPILGCVLIDMYAKCGDLEEAIEVFRK 310
Query: 393 VPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDD 452
+ +K ++VW+AMI+GYAIHG G +AL F KMQ G++P+ + +T IL+ACSH+G+V +
Sbjct: 311 MEEKGVSVWTAMISGYAIHGRGREALEWFMKMQ-TAGVEPNQMTFTGILTACSHAGLVHE 369
Query: 453 GLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSAC 512
F+SM+ G +PSIEHY C+VDLLGRAG A + I MPV+ A +W LL+AC
Sbjct: 370 AKLLFESMERIHGFKPSIEHYGCMVDLLGRAGLLKEAEELIENMPVKPNAAIWGALLNAC 429
Query: 513 MKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPG 572
H N+ELG+ K L+ ++PG G YI +A++ +AG W +AA R M ++ ++K PG
Sbjct: 430 HIHGNLELGKQIGKILIQVDPGHGGRYIHLASIHAAAGEWNQAARVRRQMKEQGVSKLPG 489
Query: 573 WSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKELHIKLLEAGY 614
S + ++G+ F+AGD SH +I L+++ +L E GY
Sbjct: 490 CSVISVNGTAHEFLAGDESHPQIKEIDHMLEQIVERLREEGY 531
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 111/416 (26%), Positives = 200/416 (48%), Gaps = 45/416 (10%)
Query: 36 VLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYS--KCSDFVSSRKVLDEMPV 93
+L+ C+N+ + +++H +LK G D + L+ + +R V D +
Sbjct: 24 LLQRCSNMEEL---RQIHGQMLKTGLILDEIPASKLLAFCASPNSGSLAYARTVFDR--I 78
Query: 94 RLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCS----FRQGI 149
+ WN++I +S + +EA+L+ M + +A TF ++ CS +
Sbjct: 79 FRPNTFMWNTMIRGYSNSKEPEEALLLYHHMLYHSVPHNAYTFPFLLKACSSMSASEETQ 138
Query: 150 SMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIG----------------- 192
+H + K+G +EI NS++++Y+K G + AR +FD++
Sbjct: 139 QIHAHIIKMG-FGSEIYTTNSLLNVYSKSGDIKSARLLFDQVDQRDTVSWNSMIDGYTKC 197
Query: 193 --------------ETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLI 238
E +I+SWT++I G V G EA L ++M+ + D V ++ +
Sbjct: 198 GEIEMAYEIFNHMPERNIISWTSMISGCVGAGKPKEALNLFHRMQTAGIKLDNVALVSTL 257
Query: 239 LGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVF 298
CA +G L +H+ + K + L +L+ MY KCGDLE A VF + EK V
Sbjct: 258 QACADLGVLDQGKWIHAYIKKHEIEIDPILGCVLIDMYAKCGDLEEAIEVFRKMEEKGVS 317
Query: 299 LWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYI 358
+WT+MI GYA G EA+ F ++ V PN+ T L+AC+ G + + K + E +
Sbjct: 318 VWTAMISGYAIHGRGREALEWFMKMQTAGVEPNQMTFTGILTACSHAGLVHEAKLLFESM 377
Query: 359 -VLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDK-DLAVWSAMINGYAIHG 412
++G + + + ++ + + G + +A+E+ E +P K + A+W A++N IHG
Sbjct: 378 ERIHGFKPSIEHYGCMVDLLGRAGLLKEAEELIENMPVKPNAAIWGALLNACHIHG 433
Score = 132 bits (333), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 107/433 (24%), Positives = 192/433 (44%), Gaps = 70/433 (16%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MIR +N+ EE L Y ML V N++TFP +LKAC+++++ + +++H+H++K+G
Sbjct: 89 MIRGYSNSKEPEEALLLYHHMLYHSVPHNAYTFPFLLKACSSMSASEETQQIHAHIIKMG 148
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVR-------------------------- 94
F + + L+++YSK D S+R + D++ R
Sbjct: 149 FGSEIYTTNSLLNVYSKSGDIKSARLLFDQVDQRDTVSWNSMIDGYTKCGEIEMAYEIFN 208
Query: 95 ---LRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCS----FRQ 147
R+++SW S+IS A EA+ + M G++L VS + C+ Q
Sbjct: 209 HMPERNIISWTSMISGCVGAGKPKEALNLFHRMQTAGIKLDNVALVSTLQACADLGVLDQ 268
Query: 148 GISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYV 207
G +H + K + + I L ++ MYAK G + EA +F ++ E + WT +I GY
Sbjct: 269 GKWIHAYIKKHEIEIDPI-LGCVLIDMYAKCGDLEEAIEVFRKMEEKGVSVWTAMISGYA 327
Query: 208 NVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDP 267
G EA +M+ V P+ + F ++ C+ G + A LL +S
Sbjct: 328 IHGRGREALEWFMKMQTAGVEPNQMTFTGILTACSHAGLVHEA----KLLFES------- 376
Query: 268 LDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTS 327
R+ + S+ + M+ + G EA L + +
Sbjct: 377 -----------------MERIHG--FKPSIEHYGCMVDLLGRAGLLKEAEELIENM---P 414
Query: 328 VRPNEATLATTLSACAELGSLSKGKEIEEYIV-LNGLESNRQVQTSLIHMFSKCGRINKA 386
V+PN A L+AC G+L GK+I + ++ ++ R + + IH + G N+A
Sbjct: 415 VKPNAAIWGALLNACHIHGNLELGKQIGKILIQVDPGHGGRYIHLASIH--AAAGEWNQA 472
Query: 387 KEVFERVPDKDLA 399
V ++ ++ ++
Sbjct: 473 ARVRRQMKEQGVS 485
>gi|125579001|gb|EAZ20147.1| hypothetical protein OsJ_35746 [Oryza sativa Japonica Group]
Length = 601
Score = 329 bits (843), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 197/588 (33%), Positives = 317/588 (53%), Gaps = 12/588 (2%)
Query: 8 NGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFV 67
NG F + SM+++G N + V+ AC G +H+ +KVG +
Sbjct: 19 NGMFHDARRALVSMMRSGFPLNVASLVSVVPACGTEQEEKFGLSIHALAVKVGLNTMVNL 78
Query: 68 QTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMW-- 125
L+DMY K D +S +V D M + + VSWNS I A + + + ++M
Sbjct: 79 ANALVDMYGKFGDVEASMQVFDGMLEQ--NEVSWNSAIGCFLNAGFYGDVLRMFRKMSEH 136
Query: 126 -VLGLELSASTFV-SVVSGCSFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNE 183
V+ ++ S+ + ++V SF G +H K + + +I +ANS++ MYAKFG + +
Sbjct: 137 NVMPGSITLSSLLPALVELGSFDLGREVHGYSIKRAM-DLDIFVANSLVDMYAKFGSLEK 195
Query: 184 ARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQ 243
A +IF+++ + ++VSW +I V G EAF L M++ P+ + +N++ CA+
Sbjct: 196 ASTIFEQMKDRNVVSWNAMIANLVQNGAETEAFRLVTDMQKSGECPNSITLVNVLPACAR 255
Query: 244 VGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSM 303
+ +L + +H+ ++ G + + N L+ MY+KCG L LAR +F+ EK + ++
Sbjct: 256 MASLKMGKQIHAWSIRRGLMFDLFISNALIDMYSKCGQLSLARNIFERS-EKDDVSYNTL 314
Query: 304 IGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGL 363
I GY+Q + E++ LFK++ + + + LSAC L GKEI +V L
Sbjct: 315 ILGYSQSPWCFESLLLFKQMRSVGIDYDAVSFMGALSACTNLSVFKHGKEIHCVLVRRLL 374
Query: 364 ESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYK 423
+ + SL+ +++K G + A ++F ++ KD+A W+ MI GY +HG D A LF
Sbjct: 375 SGHPFLSNSLLDLYTKGGMLVTASKIFNKITKKDVASWNTMILGYGMHGQIDIAFELFEL 434
Query: 424 MQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRA 483
M+ +GL D V Y ++L+ACSH G+VD G +F M + IEP HY C+VDLLGRA
Sbjct: 435 MKG-DGLDYDHVSYIAVLAACSHGGLVDKGKKYFSQMVAQ-NIEPQQMHYACMVDLLGRA 492
Query: 484 GRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMA 543
G+ + I +MP + VW LL AC H N+EL ++AA++L L P +G Y LM
Sbjct: 493 GQLSKCAEIIRDMPFPANSDVWGALLGACRIHGNIELAQWAAEHLFELKPEHSGYYTLMI 552
Query: 544 NLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVE-IDGS-VQVFVAGD 589
N++ G W EA R LM R++ K P +S V+ DG+ +Q F+ GD
Sbjct: 553 NMYAETGRWNEANKIRKLMKSRKVQKNPAYSWVQDQDGNKLQAFLVGD 600
Score = 192 bits (488), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 120/362 (33%), Positives = 193/362 (53%), Gaps = 7/362 (1%)
Query: 96 RSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCSFRQ----GISM 151
R VVSWNS++SA + +A L M G L+ ++ VSVV C Q G+S+
Sbjct: 4 RDVVSWNSLVSAFLVNGMFHDARRALVSMMRSGFPLNVASLVSVVPACGTEQEEKFGLSI 63
Query: 152 HCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGN 211
H K+GL N + LAN+++ MY KFG V + +FD + E + VSW + IG ++N G
Sbjct: 64 HALAVKVGL-NTMVNLANALVDMYGKFGDVEASMQVFDGMLEQNEVSWNSAIGCFLNAGF 122
Query: 212 VNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNL 271
+ + +M +V P + +L+ ++G+ L +H +K + + + N
Sbjct: 123 YGDVLRMFRKMSEHNVMPGSITLSSLLPALVELGSFDLGREVHGYSIKRAMDLDIFVANS 182
Query: 272 LVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPN 331
LV MY K G LE A +F+ + +++V W +MI Q G +EA L + K+ PN
Sbjct: 183 LVDMYAKFGSLEKASTIFEQMKDRNVVSWNAMIANLVQNGAETEAFRLVTDMQKSGECPN 242
Query: 332 EATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFE 391
TL L ACA + SL GK+I + + GL + + +LI M+SKCG+++ A+ +FE
Sbjct: 243 SITLVNVLPACARMASLKMGKQIHAWSIRRGLMFDLFISNALIDMYSKCGQLSLARNIFE 302
Query: 392 RVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVD 451
R +KD ++ +I GY+ ++L LF +M+ V G+ DAV + LSAC++ +
Sbjct: 303 R-SEKDDVSYNTLILGYSQSPWCFESLLLFKQMRSV-GIDYDAVSFMGALSACTNLSVFK 360
Query: 452 DG 453
G
Sbjct: 361 HG 362
Score = 166 bits (420), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 122/462 (26%), Positives = 225/462 (48%), Gaps = 13/462 (2%)
Query: 7 NNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAF 66
N G + + L + M + V S T +L A + S G+ VH + +K D F
Sbjct: 119 NAGFYGDVLRMFRKMSEHNVMPGSITLSSLLPALVELGSFDLGREVHGYSIKRAMDLDIF 178
Query: 67 VQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWV 126
V L+DMY+K + + ++M + R+VVSWN++I+ + EA ++ +M
Sbjct: 179 VANSLVDMYAKFGSLEKASTIFEQM--KDRNVVSWNAMIANLVQNGAETEAFRLVTDMQK 236
Query: 127 LGLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVN 182
G ++ T V+V+ C S + G +H + GL+ ++ ++N+++ MY+K G+++
Sbjct: 237 SGECPNSITLVNVLPACARMASLKMGKQIHAWSIRRGLM-FDLFISNALIDMYSKCGQLS 295
Query: 183 EARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCA 242
AR+IF E E VS+ T+I GY E+ L QMR + + D V F+ + C
Sbjct: 296 LARNIF-ERSEKDDVSYNTLILGYSQSPWCFESLLLFKQMRSVGIDYDAVSFMGALSACT 354
Query: 243 QVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTS 302
+ +H +L++ + L N L+ +YTK G L A ++F+ + +K V W +
Sbjct: 355 NLSVFKHGKEIHCVLVRRLLSGHPFLSNSLLDLYTKGGMLVTASKIFNKITKKDVASWNT 414
Query: 303 MIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNG 362
MI GY G A LF+ + + + + L+AC+ G + KGK+ +V
Sbjct: 415 MILGYGMHGQIDIAFELFELMKGDGLDYDHVSYIAVLAACSHGGLVDKGKKYFSQMVAQN 474
Query: 363 LESNRQVQTSLIHMFSKCGRINKAKEVFERVP-DKDLAVWSAMINGYAIHGMGDQALNLF 421
+E + ++ + + G+++K E+ +P + VW A++ IHG + A
Sbjct: 475 IEPQQMHYACMVDLLGRAGQLSKCAEIIRDMPFPANSDVWGALLGACRIHGNIELAQ--- 531
Query: 422 YKMQHVEGLKPD-AVVYTSILSACSHSGMVDDGLSFFKSMQS 462
+ +H+ LKP+ + YT +++ + +G ++ K M+S
Sbjct: 532 WAAEHLFELKPEHSGYYTLMINMYAETGRWNEANKIRKLMKS 573
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 83/298 (27%), Positives = 152/298 (51%), Gaps = 4/298 (1%)
Query: 193 ETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALS 252
E +VSW +++ ++ G ++A M R ++ ++++ C LS
Sbjct: 3 ERDVVSWNSLVSAFLVNGMFHDARRALVSMMRSGFPLNVASLVSVVPACGTEQEEKFGLS 62
Query: 253 MHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGY 312
+H+L +K G N L N LV MY K GD+E + +VFD +LE++ W S IG + G+
Sbjct: 63 IHALAVKVGLNTMVNLANALVDMYGKFGDVEASMQVFDGMLEQNEVSWNSAIGCFLNAGF 122
Query: 313 PSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTS 372
+ + +F+++ + +V P TL++ L A ELGS G+E+ Y + ++ + V S
Sbjct: 123 YGDVLRMFRKMSEHNVMPGSITLSSLLPALVELGSFDLGREVHGYSIKRAMDLDIFVANS 182
Query: 373 LIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKP 432
L+ M++K G + KA +FE++ D+++ W+AMI +G +A L MQ G P
Sbjct: 183 LVDMYAKFGSLEKASTIFEQMKDRNVVSWNAMIANLVQNGAETEAFRLVTDMQK-SGECP 241
Query: 433 DAVVYTSILSACSHSGMVDDGLSFFK-SMQSNFGIEPSIEHYLCLVDLLGRAGRFDLA 489
+++ ++L AC+ + G S++ + I + L+D+ + G+ LA
Sbjct: 242 NSITLVNVLPACARMASLKMGKQIHAWSIRRGLMFDLFISN--ALIDMYSKCGQLSLA 297
Score = 129 bits (324), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 77/249 (30%), Positives = 134/249 (53%), Gaps = 8/249 (3%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI N NG+ E + M ++G NS T VL ACA + S+ GK++H+ ++ G
Sbjct: 214 MIANLVQNGAETEAFRLVTDMQKSGECPNSITLVNVLPACARMASLKMGKQIHAWSIRRG 273
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
D F+ LIDMYSKC +R + + + VS+N++I +S++ E++L+
Sbjct: 274 LMFDLFISNALIDMYSKCGQLSLARNIFERSE---KDDVSYNTLILGYSQSPWCFESLLL 330
Query: 121 LKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
K+M +G++ A +F+ +S C+ F+ G +HC + + LL+ L+NS++ +Y
Sbjct: 331 FKQMRSVGIDYDAVSFMGALSACTNLSVFKHGKEIHCVLVRR-LLSGHPFLSNSLLDLYT 389
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K G + A IF++I + + SW T+I GY G ++ AF L M+ + D V ++
Sbjct: 390 KGGMLVTASKIFNKITKKDVASWNTMILGYGMHGQIDIAFELFELMKGDGLDYDHVSYIA 449
Query: 237 LILGCAQVG 245
++ C+ G
Sbjct: 450 VLAACSHGG 458
>gi|356545843|ref|XP_003541343.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Glycine max]
Length = 747
Score = 329 bits (843), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 199/648 (30%), Positives = 324/648 (50%), Gaps = 69/648 (10%)
Query: 40 CANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVR----- 94
C + D K++H H++K + F+ L+ Y+K +R+V D+MP R
Sbjct: 19 CELLKHCRDTKKIHCHIIKAFRNPEIFLLNNLVSAYAKFDRITYARRVFDQMPQRNLYSW 78
Query: 95 ------------------------LRSVVSWNSIISAHSRACLNDEAILVLKEMWVLG-- 128
R +VSWNS+ISA++ +++ M G
Sbjct: 79 NTLLSSYSKLACLPEMERVFHAMPTRDMVSWNSLISAYAGRGFLLQSVKAYNLMLYNGPF 138
Query: 129 ----LELSASTFVSVVSGCSFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEA 184
+ LS ++ GC G+ +H V K G + + + + ++ MY+K G V A
Sbjct: 139 NLNRIALSTMLILASKQGC-VHLGLQVHGHVVKFGF-QSYVFVGSPLVDMYSKTGLVFCA 196
Query: 185 RSIFDEIGETSIV-------------------------------SWTTIIGGYVNVGNVN 213
R FDE+ E ++V SWT +I G+ G
Sbjct: 197 RQAFDEMPEKNVVMYNTLIAGLMRCSRIEDSRQLFYDMQEKDSISWTAMIAGFTQNGLDR 256
Query: 214 EAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLV 273
EA L +MR ++ D F +++ C V L +H+ ++++ Y + + + LV
Sbjct: 257 EAIDLFREMRLENLEMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYQDNIFVGSALV 316
Query: 274 SMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEA 333
MY KC ++ A VF + K+V WT+M+ GY Q GY EAV +F + + P++
Sbjct: 317 DMYCKCKSIKSAETVFRKMNCKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQNNGIEPDDF 376
Query: 334 TLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERV 393
TL + +S+CA L SL +G + +++GL S V +L+ ++ KCG I + +F +
Sbjct: 377 TLGSVISSCANLASLEEGAQFHCRALVSGLISFITVSNALVTLYGKCGSIEDSHRLFSEM 436
Query: 394 PDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDG 453
D W+A+++GYA G ++ L LF M G KPD V + +LSACS +G+V G
Sbjct: 437 SYVDEVSWTALVSGYAQFGKANETLRLFESML-AHGFKPDKVTFIGVLSACSRAGLVQKG 495
Query: 454 LSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACM 513
F+SM I P +HY C++DL RAGR + A K I++MP A WA LLS+C
Sbjct: 496 NQIFESMIKEHRIIPIEDHYTCMIDLFSRAGRLEEARKFINKMPFSPDAIGWASLLSSCR 555
Query: 514 KHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGW 573
H N+E+G++AA++LL L P +T +YIL+++++ + G W+E A R M D+ L KEPG
Sbjct: 556 FHRNMEIGKWAAESLLKLEPHNTASYILLSSIYAAKGKWEEVANLRKGMRDKGLRKEPGC 615
Query: 574 SQVEIDGSVQVFVAGDRSHHLSVDIRKTLKELHIKLLEAGYIAEADIV 621
S ++ V +F A D+S+ S I L++L+ K+++ GY+ + + V
Sbjct: 616 SWIKYKNQVHIFSADDQSNPFSDQIYSELEKLNYKMVQEGYVPDMNSV 663
Score = 182 bits (461), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 119/451 (26%), Positives = 217/451 (48%), Gaps = 45/451 (9%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHG-NSFTFPLVLKACANINSIWDGKRVHSHVLKV 59
+I G +++ Y+ ML G N +L + + G +VH HV+K
Sbjct: 112 LISAYAGRGFLLQSVKAYNLMLYNGPFNLNRIALSTMLILASKQGCVHLGLQVHGHVVKF 171
Query: 60 GFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMP--------------------------- 92
GFQ FV + L+DMYSK +R+ DEMP
Sbjct: 172 GFQSYVFVGSPLVDMYSKTGLVFCARQAFDEMPEKNVVMYNTLIAGLMRCSRIEDSRQLF 231
Query: 93 --VRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGC----SFR 146
++ + +SW ++I+ ++ L+ EAI + +EM + LE+ TF SV++ C + +
Sbjct: 232 YDMQEKDSISWTAMIAGFTQNGLDREAIDLFREMRLENLEMDQYTFGSVLTACGGVMALQ 291
Query: 147 QGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGY 206
+G +H + + +N I + ++++ MY K + A ++F ++ ++VSWT ++ GY
Sbjct: 292 EGKQVHAYIIRTDYQDN-IFVGSALVDMYCKCKSIKSAETVFRKMNCKNVVSWTAMLVGY 350
Query: 207 VNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNED 266
G EA + M+ + PD ++I CA + +L H L SG +
Sbjct: 351 GQNGYSEEAVKIFCDMQNNGIEPDDFTLGSVISSCANLASLEEGAQFHCRALVSGLISFI 410
Query: 267 PLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKT 326
+ N LV++Y KCG +E + R+F + WT+++ GYAQ G +E + LF+ +L
Sbjct: 411 TVSNALVTLYGKCGSIEDSHRLFSEMSYVDEVSWTALVSGYAQFGKANETLRLFESMLAH 470
Query: 327 SVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQ-----TSLIHMFSKCG 381
+P++ T LSAC+ G + KG +I E ++ + +R + T +I +FS+ G
Sbjct: 471 GFKPDKVTFIGVLSACSRAGLVQKGNQIFESMI----KEHRIIPIEDHYTCMIDLFSRAG 526
Query: 382 RINKAKEVFERVP-DKDLAVWSAMINGYAIH 411
R+ +A++ ++P D W+++++ H
Sbjct: 527 RLEEARKFINKMPFSPDAIGWASLLSSCRFH 557
>gi|449476974|ref|XP_004154891.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g14470-like [Cucumis sativus]
Length = 759
Score = 329 bits (843), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 203/650 (31%), Positives = 325/650 (50%), Gaps = 82/650 (12%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
M++ + G+ + +S + + F + ++K G H++VLK+G
Sbjct: 71 MLKYYSRMGAHNQVVSLFKCTHSLNLRPQPFVYIYLIKLAGK-----SGNMFHAYVLKLG 125
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
D F++ ++DMY+K +R + ++M R ++ WNS+IS ++ EA+++
Sbjct: 126 HIDDHFIRNAILDMYAKNGQVDLARNLFEQMAER--TLADWNSMISGCWKSGNETEAVVL 183
Query: 121 LKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGK 180
M + T+ S+V+G YAK G
Sbjct: 184 FNMMPARNI----ITWTSMVTG--------------------------------YAKMGD 207
Query: 181 VNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILG 240
+ AR FDE+ E S+VSW + Y EA L +QM +TPD ++ I
Sbjct: 208 LESARRYFDEMPERSVVSWNAMQSAYAQKECPKEALNLFHQMLEEGITPDDTTWVVTISS 267
Query: 241 CAQVGNLFLA----------------------LSMHSLL--LKSGYNNEDPLD------- 269
C+ +G+ LA L MH+ L+ N D L
Sbjct: 268 CSSIGDPTLADSILRMIDQKHIVLNSFVKTALLDMHAKFGNLEIARNIFDELGSQRNAVT 327
Query: 270 -NLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKT-S 327
N+++S YT+ G L LAR +FD + ++ V W SMI GYAQ G + ++ LFK ++
Sbjct: 328 WNIMISAYTRVGKLSLARELFDNMPKRDVVSWNSMIAGYAQNGESAMSIELFKEMISCMD 387
Query: 328 VRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAK 387
++P+E T+A+ LSAC +G+L + + + ++ SLI M+SKCG + A
Sbjct: 388 IQPDEVTIASVLSACGHIGALKLSYWVLDIVREKNIKLGISGFNSLIFMYSKCGSVADAH 447
Query: 388 EVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHS 447
+F+ + +D+ ++ +I+G+A +G G +A+ L M+ EG++PD V Y +L+ACSH+
Sbjct: 448 RIFQTMGTRDVVSFNTLISGFAANGHGKEAIKLVLTMEE-EGIEPDHVTYIGVLTACSHA 506
Query: 448 GMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAP 507
G++++G + FKS+Q+ P+++HY C+VDLLGRAG D A I MP++ A V+
Sbjct: 507 GLLNEGKNVFKSIQA-----PTVDHYACMVDLLGRAGELDEAKMLIQSMPMKPHAGVYGS 561
Query: 508 LLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRL 567
LL+A H V LGE AA L L P + GNY+L++N++ S G W++ R +M L
Sbjct: 562 LLNASRIHKRVGLGELAASKLFELEPQNLGNYVLLSNIYASFGRWEDVKRVREMMKKGGL 621
Query: 568 TKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKELHIKLLEAGYIAE 617
K G S VE G V F GDRSH S DI K L EL K+ G++A+
Sbjct: 622 KKSVGMSWVEYKGQVHKFTVGDRSHEQSKDIYKLLAELERKMKRVGFVAD 671
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/288 (19%), Positives = 123/288 (42%), Gaps = 34/288 (11%)
Query: 288 VFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGS 347
+F + +++ M+ Y+++G ++ V+LFK ++RP + + G+
Sbjct: 56 IFTSSPSPDASVYSCMLKYYSRMGAHNQVVSLFKCTHSLNLRPQPFVYIYLIKLAGKSGN 115
Query: 348 LSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMING 407
+ Y++ G + ++ +++ M++K G+++ A+ +FE++ ++ LA W++MI+G
Sbjct: 116 M-----FHAYVLKLGHIDDHFIRNAILDMYAKNGQVDLARNLFEQMAERTLADWNSMISG 170
Query: 408 YAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIE 467
G +A+ LF M + + +TS+++ + G ++ +F M E
Sbjct: 171 CWKSGNETEAVVLFNMMP-----ARNIITWTSMVTGYAKMGDLESARRYFDEMP-----E 220
Query: 468 PSIEHYLCLVDLLGRAGRFDLALKTIHEMPVE---VQAQVWAPLLSAC------------ 512
S+ + + + AL H+M E W +S+C
Sbjct: 221 RSVVSWNAMQSAYAQKECPKEALNLFHQMLEEGITPDDTTWVVTISSCSSIGDPTLADSI 280
Query: 513 ---MKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAAT 557
+ ++ L + LL ++ GN + N+F G + A T
Sbjct: 281 LRMIDQKHIVLNSFVKTALLDMH-AKFGNLEIARNIFDELGSQRNAVT 327
>gi|449484072|ref|XP_004156776.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39952,
mitochondrial-like [Cucumis sativus]
Length = 754
Score = 329 bits (843), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 179/550 (32%), Positives = 302/550 (54%), Gaps = 22/550 (4%)
Query: 37 LKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLR 96
+AC +++++ +GK +H LK GF V++ ++ MYS+C + + ++ +
Sbjct: 217 FQACVDLDALVEGKCLHGLALKNGFLCFEVVKSTILSMYSRCGSPEEAYRCFCKLDQK-- 274
Query: 97 SVVSWNSIISAHSRACLNDEAILVLKEMW---VLGLELSASTFV-------SVVSGCSFR 146
++SW SII+ HS+ L E + + EM ++ E+ S + + G +F
Sbjct: 275 DLISWTSIIAVHSKFGLMSECLHLFWEMQASEIIPDEIVISCMLMGFGNSDRIFEGKAFH 334
Query: 147 QGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGY 206
I CC G+ +N +++SMY KFG + A IF ++S W+T+I GY
Sbjct: 335 ARILKQCCALS-GITHN------ALLSMYCKFGHLGTANKIFHSFHKSS-EDWSTMILGY 386
Query: 207 VNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNED 266
N+G + +M + PDL +++I C+QVG + + S+H +K+
Sbjct: 387 SNMGQKEKCISFLREMLLLGREPDLNSLVSVISSCSQVGAINIGRSIHCYAIKNSIIENV 446
Query: 267 PLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKT 326
+ N L+ MY K G + R+F L++ V W ++I Y Q G +EA+ LF +++K
Sbjct: 447 SVANSLMDMYGKSGHVTATWRIFHRTLQRDVISWNTLISSYKQSGILAEAIILFDKMVKE 506
Query: 327 SVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKA 386
V PN+ T LSACA L SL +G++I +YI NG ESN ++T+LI M++KCG + +
Sbjct: 507 KVYPNKVTCIIVLSACAHLASLDEGEKIHQYIKENGFESNITIRTALIDMYAKCGELETS 566
Query: 387 KEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSH 446
+++F ++D+ +W+ MI+ Y +HG + A+ +F M+ +KP+A + S+LSAC+H
Sbjct: 567 RKLFNSTEERDVILWNVMISNYGMHGHVESAMEIFQLMEE-SNIKPNAQTFLSLLSACNH 625
Query: 447 SGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWA 506
+G V +G F MQ +GIEPS++HY ++DLLGR+G + A + MP+ VW
Sbjct: 626 TGHVLEGRHLFDRMQ-KYGIEPSLKHYASIIDLLGRSGSLEAAEALVLSMPITPDGTVWG 684
Query: 507 PLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRR 566
LLSAC H+ E+G A+ + +P + G YI++++L++ G W E R +M R
Sbjct: 685 SLLSACKIHNEFEVGVRLARYAIESDPKNDGYYIILSDLYSCLGRWDEVEKVRDMMKKRG 744
Query: 567 LTKEPGWSQV 576
+ K GWS +
Sbjct: 745 VEKRAGWSAL 754
Score = 207 bits (527), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 138/524 (26%), Positives = 257/524 (49%), Gaps = 12/524 (2%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+I++ +NG ++ Y M + N FT P+V+ CA + G +H K+G
Sbjct: 79 IIQSHFSNGDYQRAFDFYLQMRASSSLPNQFTVPMVVSTCAELMMFNHGMNIHGLTSKLG 138
Query: 61 -FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAIL 119
F ++ + + I MYSKC S+ + E+ V + VV+W ++I + + + +
Sbjct: 139 LFVGNSAIGSSFIYMYSKCGHVESASIMFSEITV--KDVVTWTALIVGYVQNNESGRGLK 196
Query: 120 VLKEMWVLGLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMY 175
L EM +G + T S C + +G +H K G L E+ + ++++SMY
Sbjct: 197 CLFEMHRIGGTPNYKTIGSGFQACVDLDALVEGKCLHGLALKNGFLCFEV-VKSTILSMY 255
Query: 176 AKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFL 235
++ G EA F ++ + ++SWT+II + G ++E L +M+ + PD +V
Sbjct: 256 SRCGSPEEAYRCFCKLDQKDLISWTSIIAVHSKFGLMSECLHLFWEMQASEIIPDEIVIS 315
Query: 236 NLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEK 295
+++G +F + H+ +LK N L+SMY K G L A ++F + K
Sbjct: 316 CMLMGFGNSDRIFEGKAFHARILKQCCALSGITHNALLSMYCKFGHLGTANKIFHS-FHK 374
Query: 296 SVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIE 355
S W++MI GY+ +G + ++ + +L P+ +L + +S+C+++G+++ G+ I
Sbjct: 375 SSEDWSTMILGYSNMGQKEKCISFLREMLLLGREPDLNSLVSVISSCSQVGAINIGRSIH 434
Query: 356 EYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGD 415
Y + N + N V SL+ M+ K G + +F R +D+ W+ +I+ Y G+
Sbjct: 435 CYAIKNSIIENVSVANSLMDMYGKSGHVTATWRIFHRTLQRDVISWNTLISSYKQSGILA 494
Query: 416 QALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLC 475
+A+ LF KM E + P+ V +LSAC+H +D+G + ++ N G E +I
Sbjct: 495 EAIILFDKMVK-EKVYPNKVTCIIVLSACAHLASLDEGEKIHQYIKEN-GFESNITIRTA 552
Query: 476 LVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVE 519
L+D+ + G + + K + E +W ++S H +VE
Sbjct: 553 LIDMYAKCGELETSRKLFNSTE-ERDVILWNVMISNYGMHGHVE 595
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 117/463 (25%), Positives = 205/463 (44%), Gaps = 10/463 (2%)
Query: 53 HSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRAC 112
HS ++ G + F T L+ Y+ S + + + + WNSII +H
Sbjct: 30 HSLIITTGNSNNVFFATKLMAFYAYHRKPAFSTHLFR--LIHSKDIFLWNSIIQSHFSNG 87
Query: 113 LNDEAILVLKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLA 168
A +M + T VVS C+ F G+++H KLGL +
Sbjct: 88 DYQRAFDFYLQMRASSSLPNQFTVPMVVSTCAELMMFNHGMNIHGLTSKLGLFVGNSAIG 147
Query: 169 NSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVT 228
+S + MY+K G V A +F EI +V+WT +I GYV +M R+ T
Sbjct: 148 SSFIYMYSKCGHVESASIMFSEITVKDVVTWTALIVGYVQNNESGRGLKCLFEMHRIGGT 207
Query: 229 PDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRV 288
P+ + C + L +H L LK+G+ + + + ++SMY++CG E A R
Sbjct: 208 PNYKTIGSGFQACVDLDALVEGKCLHGLALKNGFLCFEVVKSTILSMYSRCGSPEEAYRC 267
Query: 289 FDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSL 348
F + +K + WTS+I +++ G SE ++LF + + + P+E ++ L +
Sbjct: 268 FCKLDQKDLISWTSIIAVHSKFGLMSECLHLFWEMQASEIIPDEIVISCMLMGFGNSDRI 327
Query: 349 SKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGY 408
+GK I+ + +L+ M+ K G + A ++F K WS MI GY
Sbjct: 328 FEGKAFHARILKQCCALSGITHNALLSMYCKFGHLGTANKIFHSF-HKSSEDWSTMILGY 386
Query: 409 AIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEP 468
+ G ++ ++ +M + G +PD S++S+CS G ++ G S N IE
Sbjct: 387 SNMGQKEKCISFLREML-LLGREPDLNSLVSVISSCSQVGAINIGRSIHCYAIKNSIIE- 444
Query: 469 SIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSA 511
++ L+D+ G++G + H ++ W L+S+
Sbjct: 445 NVSVANSLMDMYGKSGHVTATWRIFHR-TLQRDVISWNTLISS 486
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 94/207 (45%), Gaps = 4/207 (1%)
Query: 241 CAQ--VGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVF 298
C Q L + HSL++ +G +N L++ Y + +F + K +F
Sbjct: 15 CCQGDFDKLLIRFWFHSLIITTGNSNNVFFATKLMAFYAYHRKPAFSTHLFRLIHSKDIF 74
Query: 299 LWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYI 358
LW S+I + G A + + ++ +S PN+ T+ +S CAEL + G I
Sbjct: 75 LWNSIIQSHFSNGDYQRAFDFYLQMRASSSLPNQFTVPMVVSTCAELMMFNHGMNIHGLT 134
Query: 359 VLNGL-ESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQA 417
GL N + +S I+M+SKCG + A +F + KD+ W+A+I GY + +
Sbjct: 135 SKLGLFVGNSAIGSSFIYMYSKCGHVESASIMFSEITVKDVVTWTALIVGYVQNNESGRG 194
Query: 418 LNLFYKMQHVEGLKPDAVVYTSILSAC 444
L ++M + G P+ S AC
Sbjct: 195 LKCLFEMHRIGG-TPNYKTIGSGFQAC 220
>gi|115487922|ref|NP_001066448.1| Os12g0233200 [Oryza sativa Japonica Group]
gi|77553539|gb|ABA96335.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113648955|dbj|BAF29467.1| Os12g0233200 [Oryza sativa Japonica Group]
Length = 704
Score = 329 bits (843), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 180/543 (33%), Positives = 284/543 (52%), Gaps = 44/543 (8%)
Query: 110 RACLNDEAILVLKEMWVLGLELSASTFVSVVS----------GCSFRQGISMHCCVYKLG 159
RA L A+ + + + L A TFV V G + G ++HC K G
Sbjct: 113 RARLPARALGLFRRVVRDRLPADARTFVFAVKAAAAAAESEHGGTPSGGEAIHCAALKCG 172
Query: 160 LLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGL- 218
+ + + N+++ YA +++A +FDE+ E +VSWTT++ GY G +EA+ L
Sbjct: 173 FVGESVLVGNALVHFYANHKSLDDAGKVFDEMPERDVVSWTTLVDGYARAGLADEAWRLF 232
Query: 219 CNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTK 278
C + + P+ V + + Q+G L + +H + + G LDN LV M+ K
Sbjct: 233 CRMVVVGGMRPNAVTLVAAVSAIGQMGLLAFGIMLHKYVTEGGVARSVNLDNALVDMFGK 292
Query: 279 CGDLELARRVFDAVLEKSVFLWTSMIGGYA------------------------------ 308
CG + AR VFD + K V+ WTSM+ YA
Sbjct: 293 CGCVRYAREVFDGMEVKDVYSWTSMVNAYAKCGDLESAEQLFKDMPRRNVVSWSCMIAAY 352
Query: 309 -QLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEI-EEYIVLNGLESN 366
QL P EAV LF+ ++ V P +ATL + LSACA+LG L G+ I E YIV N +
Sbjct: 353 SQLNQPEEAVWLFREMIAAGVDPIDATLVSVLSACAQLGCLDLGRWIYENYIVSNKIGLT 412
Query: 367 RQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQH 426
+ +LI MF+KCG + +A ++F+ + ++++ W+ MI +A+HG ++A+ LF +++
Sbjct: 413 VNLGNALIDMFAKCGDVGEASKLFDEMAERNVVSWNTMIMAHAVHGQSEEAIRLFEQLKG 472
Query: 427 VEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRF 486
E + PD + + +L++CSHSG+V +G +FK M+ + IEP +EHY C++DLLG+ G
Sbjct: 473 -ENIVPDQITFLGLLASCSHSGLVSEGRRYFKEMEMFYRIEPRVEHYACMIDLLGKVGLL 531
Query: 487 DLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLF 546
+ A + MP+E W LL+AC H NVE+G A L+ L+P +G Y+LM+ ++
Sbjct: 532 EEAFEVARGMPMEADEAGWGALLNACRMHGNVEIGACVADKLVELDPSDSGIYVLMSQIY 591
Query: 547 TSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKELH 606
S W + R M DR + K PG S +E++G F+ D SH S +I LK ++
Sbjct: 592 ASKNKWDQVKMLRMTMRDRGVKKNPGCSSIEVEGKFHDFLVADVSHACSEEIYSALKNIY 651
Query: 607 IKL 609
L
Sbjct: 652 FHL 654
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 114/404 (28%), Positives = 196/404 (48%), Gaps = 43/404 (10%)
Query: 49 GKRVHSHVLKVGF-QQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISA 107
G+ +H LK GF + V L+ Y+ + KV DEMP R VVSW +++
Sbjct: 161 GEAIHCAALKCGFVGESVLVGNALVHFYANHKSLDDAGKVFDEMPER--DVVSWTTLVDG 218
Query: 108 HSRACLNDEAILVLKEMWVL-GLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLN 162
++RA L DEA + M V+ G+ +A T V+ VS GI +H V + G+
Sbjct: 219 YARAGLADEAWRLFCRMVVVGGMRPNAVTLVAAVSAIGQMGLLAFGIMLHKYVTEGGVAR 278
Query: 163 NEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQM 222
+ + L N+++ M+ K G V AR +FD + + SWT+++ Y G++ A L M
Sbjct: 279 S-VNLDNALVDMFGKCGCVRYAREVFDGMEVKDVYSWTSMVNAYAKCGDLESAEQLFKDM 337
Query: 223 RRMSVT--------------PDLVVFL-----------------NLILGCAQVGNLFLAL 251
R +V P+ V+L +++ CAQ+G L L
Sbjct: 338 PRRNVVSWSCMIAAYSQLNQPEEAVWLFREMIAAGVDPIDATLVSVLSACAQLGCLDLGR 397
Query: 252 SMH-SLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQL 310
++ + ++ + L N L+ M+ KCGD+ A ++FD + E++V W +MI +A
Sbjct: 398 WIYENYIVSNKIGLTVNLGNALIDMFAKCGDVGEASKLFDEMAERNVVSWNTMIMAHAVH 457
Query: 311 GYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKE-IEEYIVLNGLESNRQV 369
G EA+ LF++L ++ P++ T L++C+ G +S+G+ +E + +E +
Sbjct: 458 GQSEEAIRLFEQLKGENIVPDQITFLGLLASCSHSGLVSEGRRYFKEMEMFYRIEPRVEH 517
Query: 370 QTSLIHMFSKCGRINKAKEVFERVP-DKDLAVWSAMINGYAIHG 412
+I + K G + +A EV +P + D A W A++N +HG
Sbjct: 518 YACMIDLLGKVGLLEEAFEVARGMPMEADEAGWGALLNACRMHG 561
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 125/254 (49%), Gaps = 33/254 (12%)
Query: 25 GVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSS 84
G+ N+ T + A + + G +H +V + G + + L+DM+ KC +
Sbjct: 240 GMRPNAVTLVAAVSAIGQMGLLAFGIMLHKYVTEGGVARSVNLDNALVDMFGKCGCVRYA 299
Query: 85 RKVLDEMPVR-----------------------------LRSVVSWNSIISAHSRACLND 115
R+V D M V+ R+VVSW+ +I+A+S+ +
Sbjct: 300 REVFDGMEVKDVYSWTSMVNAYAKCGDLESAEQLFKDMPRRNVVSWSCMIAAYSQLNQPE 359
Query: 116 EAILVLKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGLLNNEIP----LANSV 171
EA+ + +EM G++ +T VSV+S C+ + + +Y+ +++N+I L N++
Sbjct: 360 EAVWLFREMIAAGVDPIDATLVSVLSACAQLGCLDLGRWIYENYIVSNKIGLTVNLGNAL 419
Query: 172 MSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDL 231
+ M+AK G V EA +FDE+ E ++VSW T+I + G EA L Q++ ++ PD
Sbjct: 420 IDMFAKCGDVGEASKLFDEMAERNVVSWNTMIMAHAVHGQSEEAIRLFEQLKGENIVPDQ 479
Query: 232 VVFLNLILGCAQVG 245
+ FL L+ C+ G
Sbjct: 480 ITFLGLLASCSHSG 493
>gi|356507248|ref|XP_003522381.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
mitochondrial-like [Glycine max]
Length = 635
Score = 329 bits (843), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 189/583 (32%), Positives = 307/583 (52%), Gaps = 67/583 (11%)
Query: 50 KRVHSHVLKVGFQQDAFVQTG-LIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAH 108
K V SH + F + + + LI Y +C D S+ +V ++M V+ S V+WNSI++A
Sbjct: 25 KYVSSHTHQHEFNNNNVIASNKLIASYVRCGDIDSAVRVFEDMKVK--STVTWNSILAAF 82
Query: 109 SRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGLLN-----N 163
++ + E + F + + I + C + LG+ + +
Sbjct: 83 AKKPGH--------------FEYARQLFEKIPQPNTVSYNIMLACHWHHLGVHDARGFFD 128
Query: 164 EIPLA-----NSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGL 218
+PL N+++S A+ G + EAR +F + E + VSW+ ++ GYV G+++ A
Sbjct: 129 SMPLKDVASWNTMISALAQVGLMGEARRLFSAMPEKNCVSWSAMVSGYVACGDLDAAV-- 186
Query: 219 CNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTK 278
F A M S++ + +++ Y K
Sbjct: 187 ---------------------------ECFYAAPMRSVITWTA----------MITGYMK 209
Query: 279 CGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATT 338
G +ELA R+F + +++ W +MI GY + G + + LF+ +L+T V+PN +L +
Sbjct: 210 FGRVELAERLFQEMSMRTLVTWNAMIAGYVENGRAEDGLRLFRTMLETGVKPNALSLTSV 269
Query: 339 LSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDL 398
L C+ L +L GK++ + + L S+ TSL+ M+SKCG + A E+F ++P KD+
Sbjct: 270 LLGCSNLSALQLGKQVHQLVCKCPLSSDTTAGTSLVSMYSKCGDLKDAWELFIQIPRKDV 329
Query: 399 AVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFK 458
W+AMI+GYA HG G +AL LF +M+ EGLKPD + + ++L AC+H+G+VD G+ +F
Sbjct: 330 VCWNAMISGYAQHGAGKKALRLFDEMKK-EGLKPDWITFVAVLLACNHAGLVDLGVQYFN 388
Query: 459 SMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNV 518
+M+ +FGIE EHY C+VDLLGRAG+ A+ I MP + ++ LL AC H N+
Sbjct: 389 TMRRDFGIETKPEHYACMVDLLGRAGKLSEAVDLIKSMPFKPHPAIYGTLLGACRIHKNL 448
Query: 519 ELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEI 578
L E+AAKNLL L+P Y+ +AN++ + W A+ R M D + K PG+S +EI
Sbjct: 449 NLAEFAAKNLLELDPTIATGYVQLANVYAAQNRWDHVASIRRSMKDNNVVKIPGYSWIEI 508
Query: 579 DGSVQVFVAGDRSHHLSVDIRKTLKELHIKLLEAGYIAEADIV 621
+ V F + DR H I + LK+L K+ AGY+ + + V
Sbjct: 509 NSVVHGFRSSDRLHPELASIHEKLKDLEKKMKLAGYVPDLEFV 551
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/292 (25%), Positives = 128/292 (43%), Gaps = 40/292 (13%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI NG E+ L + +ML+TGV N+ + VL C+N++++ GK+VH V K
Sbjct: 234 MIAGYVENGRAEDGLRLFRTMLETGVKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKCP 293
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
D T L+ MYSKC D + ++ ++P + VV WN++IS +++ +A+ +
Sbjct: 294 LSSDTTAGTSLVSMYSKCGDLKDAWELFIQIP--RKDVVCWNAMISGYAQHGAGKKALRL 351
Query: 121 LKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGK 180
EM GL+ TFV+V+ C+ GL++ + N++ + K
Sbjct: 352 FDEMKKEGLKPDWITFVAVLLACN------------HAGLVDLGVQYFNTMRRDFGIETK 399
Query: 181 VNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILG 240
+ D +G G ++EA L ++ M P ++ L+
Sbjct: 400 PEHYACMVDLLGRA---------------GKLSEAVDL---IKSMPFKPHPAIYGTLLGA 441
Query: 241 CAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAV 292
C NL LA LL+ LD + + Y + ++ A+ +D V
Sbjct: 442 CRIHKNLNLAEFAAKNLLE--------LDPTIATGYVQLANVYAAQNRWDHV 485
>gi|359497398|ref|XP_002270940.2| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 640
Score = 329 bits (843), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 193/572 (33%), Positives = 306/572 (53%), Gaps = 51/572 (8%)
Query: 51 RVHSHVLKVGFQQDAFVQTGLIDMYSKCS---DFVSSRKVLDEMPVRLRSVVSWNSIISA 107
++H+ ++K + FV L+ CS D + +R V DE+P WN++I A
Sbjct: 21 QIHALIIKTSLDGNNFVLAKLLRRLFACSSANDLLYARSVFDEIPSP--DTFIWNTMIRA 78
Query: 108 HSRACLNDEAILVLKEMWVLG-LELSASTFVSVVSGCSFRQ----GISMHCCVYKLGLLN 162
+ + E++ + +M + + + + V+ C + G +H V K+GL
Sbjct: 79 YLNSQNPQESMSLFFQMRHQECIPIDSYSLSLVIQACGRLKDPGNGQKLHTQVLKIGL-G 137
Query: 163 NEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQM 222
+++ + +++ MYAKFG + AR+I DE+ +V + ++ YV VG +N A L ++M
Sbjct: 138 SDLFVETALIEMYAKFGDIEIARNILDEMAHPDLVPYNVLLAEYVRVGEINLAHDLFDRM 197
Query: 223 RRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDL 282
DLV + +I G A +G D+
Sbjct: 198 PER----DLVSWNTMIHGHASLG-----------------------------------DV 218
Query: 283 ELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSAC 342
A+++FD E+ + W+SMI YA+ +EA+ LF + +V P++ T+ + LSAC
Sbjct: 219 GTAKKLFDRTCERDLISWSSMIAAYAKARQSNEALRLFHEMQLANVLPDKVTMVSVLSAC 278
Query: 343 AELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWS 402
++G+L GK I E I N +E + ++ TSL+ M++KCG I+ + VF + ++D+ WS
Sbjct: 279 GDVGALGMGKMIHECIERNRIEIDLKLGTSLVDMYAKCGDIDNSLRVFNGMNNRDVFAWS 338
Query: 403 AMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQS 462
AMI G A HG G+ AL+ F KM E +KP+ V + +LSACSH G+VD+G ++F SM
Sbjct: 339 AMIMGLANHGFGELALDHFSKMIS-EDIKPNDVTFIGVLSACSHIGLVDEGWTYFTSMSK 397
Query: 463 NFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGE 522
+ + P IEHY C+VD+LGRAGR A++ I MP A VW LL AC + NVE+ E
Sbjct: 398 VYDVSPKIEHYGCVVDILGRAGRLQEAMELIKSMPFAPDAIVWRALLGACRIYKNVEIAE 457
Query: 523 YAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSV 582
A NLL L P GNY+L++N+++ A W + R +M + + K PG S +E+D +V
Sbjct: 458 EATVNLLELEPHVDGNYVLLSNIYSQAKEWDKVVNVRRMMKNINIQKVPGSSSIEVDNAV 517
Query: 583 QVFVAGDRSHHLSVDIRKTLKELHIKLLEAGY 614
FVAGD+SH S I + L E+ +L GY
Sbjct: 518 HEFVAGDQSHPESKKILRMLSEITARLKANGY 549
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 139/567 (24%), Positives = 266/567 (46%), Gaps = 82/567 (14%)
Query: 1 MIRNSTNNGSFEETLSTYSSML-QTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKV 59
MIR N+ + +E++S + M Q + +S++ LV++AC + +G+++H+ VLK+
Sbjct: 75 MIRAYLNSQNPQESMSLFFQMRHQECIPIDSYSLSLVIQACGRLKDPGNGQKLHTQVLKI 134
Query: 60 GFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAIL 119
G D FV+T LI+MY+K D +R +LDEM +V +N +++ + R
Sbjct: 135 GLGSDLFVETALIEMYAKFGDIEIARNILDEMA--HPDLVPYNVLLAEYVR--------- 183
Query: 120 VLKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFG 179
V + L+ F + R +S N+++ +A G
Sbjct: 184 ------VGEINLAHDLFDRMPE----RDLVSW-----------------NTMIHGHASLG 216
Query: 180 KVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLIL 239
V A+ +FD E ++SW+++I Y NEA L ++M+ +V PD V ++++
Sbjct: 217 DVGTAKKLFDRTCERDLISWSSMIAAYAKARQSNEALRLFHEMQLANVLPDKVTMVSVLS 276
Query: 240 GCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFL 299
C VG L + +H + ++ + L LV MY KCGD++ + RVF+ + + VF
Sbjct: 277 ACGDVGALGMGKMIHECIERNRIEIDLKLGTSLVDMYAKCGDIDNSLRVFNGMNNRDVFA 336
Query: 300 WTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIV 359
W++MI G A G+ A++ F +++ ++PN+ T LSAC+ +G + +G +
Sbjct: 337 WSAMIMGLANHGFGELALDHFSKMISEDIKPNDVTFIGVLSACSHIGLVDEG-----WTY 391
Query: 360 LNGLESNRQVQTSLIH------MFSKCGRINKAKEVFERVP-DKDLAVWSAMINGYAIHG 412
+ V + H + + GR+ +A E+ + +P D VW A++ I+
Sbjct: 392 FTSMSKVYDVSPKIEHYGCVVDILGRAGRLQEAMELIKSMPFAPDAIVWRALLGACRIYK 451
Query: 413 ---MGDQA-LNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQ------- 461
+ ++A +NL HV+G + V+ ++I S V + K++
Sbjct: 452 NVEIAEEATVNLLELEPHVDG---NYVLLSNIYSQAKEWDKVVNVRRMMKNINIQKVPGS 508
Query: 462 SNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMK------- 514
S+ ++ ++ ++ + + L+ + E+ ++A +APL ++ ++
Sbjct: 509 SSIEVDNAVHEFVAGDQSHPESKKI---LRMLSEITARLKANGYAPLTASVLQDFDEKEK 565
Query: 515 -----HHNVELGEYAAKNLLTLNPGST 536
HH+ +L A LL+ PGST
Sbjct: 566 ENALAHHSEKLA--IAFGLLSTAPGST 590
>gi|449460189|ref|XP_004147828.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g14470-like [Cucumis sativus]
Length = 759
Score = 329 bits (843), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 203/650 (31%), Positives = 325/650 (50%), Gaps = 82/650 (12%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
M++ + G+ + +S + + F + ++K G H++VLK+G
Sbjct: 71 MLKYYSRMGAHNQVVSLFKCTHSLNLRPQPFVYIYLIKLAGK-----SGNLFHAYVLKLG 125
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
D F++ ++DMY+K +R + ++M R ++ WNS+IS ++ EA+++
Sbjct: 126 HIDDHFIRNAILDMYAKNGQVDLARNLFEQMAER--TLADWNSMISGCWKSGNETEAVVL 183
Query: 121 LKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGK 180
M + T+ S+V+G YAK G
Sbjct: 184 FNMMPARNI----ITWTSMVTG--------------------------------YAKMGD 207
Query: 181 VNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILG 240
+ AR FDE+ E S+VSW + Y EA L +QM +TPD ++ I
Sbjct: 208 LESARRYFDEMPERSVVSWNAMQSAYAQKECPKEALNLFHQMLEEGITPDDTTWVVTISS 267
Query: 241 CAQVGNLFLA----------------------LSMHSLL--LKSGYNNEDPLD------- 269
C+ +G+ LA L MH+ L+ N D L
Sbjct: 268 CSSIGDPTLADSILRMIDQKHIVLNSFVKTALLDMHAKFGNLEIARNIFDELGSQRNAVT 327
Query: 270 -NLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKT-S 327
N+++S YT+ G L LAR +FD + ++ V W SMI GYAQ G + ++ LFK ++
Sbjct: 328 WNIMISAYTRVGKLSLARELFDNMPKRDVVSWNSMIAGYAQNGESAMSIELFKEMISCMD 387
Query: 328 VRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAK 387
++P+E T+A+ LSAC +G+L + + + ++ SLI M+SKCG + A
Sbjct: 388 IQPDEVTIASVLSACGHIGALKLSYWVLDIVREKNIKLGISGFNSLIFMYSKCGSVADAH 447
Query: 388 EVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHS 447
+F+ + +D+ ++ +I+G+A +G G +A+ L M+ EG++PD V Y +L+ACSH+
Sbjct: 448 RIFQTMGTRDVVSFNTLISGFAANGHGKEAIKLVLTMEE-EGIEPDHVTYIGVLTACSHA 506
Query: 448 GMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAP 507
G++++G + FKS+Q+ P+++HY C+VDLLGRAG D A I MP++ A V+
Sbjct: 507 GLLNEGKNVFKSIQA-----PTVDHYACMVDLLGRAGELDEAKMLIQSMPMKPHAGVYGS 561
Query: 508 LLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRL 567
LL+A H V LGE AA L L P + GNY+L++N++ S G W++ R +M L
Sbjct: 562 LLNASRIHKRVGLGELAASKLFELEPQNLGNYVLLSNIYASFGRWEDVKRVREMMKKGGL 621
Query: 568 TKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKELHIKLLEAGYIAE 617
K G S VE G V F GDRSH S DI K L EL K+ G++A+
Sbjct: 622 KKSVGMSWVEYKGQVHKFTVGDRSHEQSKDIYKLLAELERKMKRVGFVAD 671
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/288 (19%), Positives = 123/288 (42%), Gaps = 34/288 (11%)
Query: 288 VFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGS 347
+F + +++ M+ Y+++G ++ V+LFK ++RP + + G+
Sbjct: 56 IFTSSPSPDASVYSCMLKYYSRMGAHNQVVSLFKCTHSLNLRPQPFVYIYLIKLAGKSGN 115
Query: 348 LSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMING 407
L Y++ G + ++ +++ M++K G+++ A+ +FE++ ++ LA W++MI+G
Sbjct: 116 L-----FHAYVLKLGHIDDHFIRNAILDMYAKNGQVDLARNLFEQMAERTLADWNSMISG 170
Query: 408 YAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIE 467
G +A+ LF M + + +TS+++ + G ++ +F M E
Sbjct: 171 CWKSGNETEAVVLFNMMP-----ARNIITWTSMVTGYAKMGDLESARRYFDEMP-----E 220
Query: 468 PSIEHYLCLVDLLGRAGRFDLALKTIHEMPVE---VQAQVWAPLLSAC------------ 512
S+ + + + AL H+M E W +S+C
Sbjct: 221 RSVVSWNAMQSAYAQKECPKEALNLFHQMLEEGITPDDTTWVVTISSCSSIGDPTLADSI 280
Query: 513 ---MKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAAT 557
+ ++ L + LL ++ GN + N+F G + A T
Sbjct: 281 LRMIDQKHIVLNSFVKTALLDMH-AKFGNLEIARNIFDELGSQRNAVT 327
>gi|359483031|ref|XP_002271968.2| PREDICTED: pentatricopeptide repeat-containing protein At4g02750
[Vitis vinifera]
Length = 788
Score = 329 bits (843), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 197/594 (33%), Positives = 319/594 (53%), Gaps = 68/594 (11%)
Query: 69 TGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLK------ 122
++ Y+K F +R++ D MP + +VSWNS+++ ++R N E L L+
Sbjct: 144 NAMVAGYAKNRQFDEARRLFDAMPAK--DLVSWNSMLTGYTR---NGEMRLGLQFFEEMA 198
Query: 123 EMWVLGLELSASTFVSV---VSGCSFRQGI---------SMHCCVYKLG------LLNNE 164
E V+ L FV V S F + I +M C + G L ++
Sbjct: 199 ERDVVSWNLMVDGFVEVGDLNSSWEFFEKIPNPNTVSWVTMLCGFARFGKIAEARRLFDQ 258
Query: 165 IPLANSV-----MSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLC 219
+P+ N V ++ Y + V+EA S+F E+ E + +SWTT+I GYV +G ++EA L
Sbjct: 259 MPIRNVVAWNAMIAAYVQNCHVDEAISLFMEMPEKNSISWTTVINGYVRMGKLDEARQLL 318
Query: 220 NQMRRMSVTP---------------------------DLVVFLNLILGCAQVGNLFLALS 252
NQM +V D+V + +I G +Q G + AL
Sbjct: 319 NQMPYRNVAAQTAMISGYVQNKRMDDARQIFNQISIRDVVCWNTMIAGYSQCGRMDEALH 378
Query: 253 MHSLLLKSGYNNEDPLD-NLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLG 311
+ ++K +D + N +V+ Y + G ++ A ++F+ + EK++ W S+I G Q G
Sbjct: 379 LFKQMVK-----KDIVSWNTMVASYAQVGQMDAAIKIFEEMKEKNIVSWNSLISGLTQNG 433
Query: 312 YPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQT 371
+A+ F + +P+++T A LS+CA L +L GK++ + ++ +G ++ V
Sbjct: 434 SYLDALKSFMLMGHEGQKPDQSTFACGLSSCAHLAALQVGKQLHQLVMKSGYATDLFVSN 493
Query: 372 SLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLK 431
+LI M++KCG I+ A+ +F+ + D+ W+++I YA++G G +AL LF+KM+ VEG+
Sbjct: 494 ALITMYAKCGSISSAELLFKDIDHFDVVSWNSLIAAYALNGNGREALKLFHKME-VEGVA 552
Query: 432 PDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALK 491
PD V + ILSACSH G++D GL FK M + IEP EHY C+VDLLGRAGR + A +
Sbjct: 553 PDEVTFVGILSACSHVGLIDQGLKLFKCMVQAYNIEPLAEHYACMVDLLGRAGRLEEAFQ 612
Query: 492 TIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGM 551
+ M + A +W LL AC H N+EL ++AA+ LL P T NY+L++N+ AG
Sbjct: 613 LVRGMKINANAGIWGALLGACRIHGNLELAKFAAEKLLEFEPHKTSNYVLLSNMQAEAGR 672
Query: 552 WKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKEL 605
W E A R LM ++ K+PGWS +E+ V F++ D +H +V++ L+ L
Sbjct: 673 WDEVARVRRLMKEKGAEKQPGWSWIELQNRVHAFLSEDPAHPRAVELCHILRSL 726
Score = 132 bits (333), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 126/518 (24%), Positives = 241/518 (46%), Gaps = 60/518 (11%)
Query: 19 SSMLQTGVHGNS-FTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSK 77
SS+ G HG+ F L + I + +V H+ ++ +I ++K
Sbjct: 3 SSLKSVGEHGSYVFRHNLKITQLGKSGQIDEAIKVFQHMT----HKNTVTHNSMISAFAK 58
Query: 78 CSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFV 137
+R++ D MP R ++VSWNS+I+A+ +EA + +M L S + +
Sbjct: 59 NGRISDARQLFDGMPQR--NIVSWNSMIAAYLHNDRVEEARQLFDKMPTRDL-YSWTLMI 115
Query: 138 SVVSGCSFRQGISMHCCVYKLGLLNNEIPL------ANSVMSMYAKFGKVNEARSIFDEI 191
+ C R G + K L N +P N++++ YAK + +EAR +FD +
Sbjct: 116 T----CYTRNGE-----LAKARNLFNLLPYKWNPVCCNAMVAGYAKNRQFDEARRLFDAM 166
Query: 192 GETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLAL 251
+VSW +++ GY G + +M D+V + ++ G +VG+L +
Sbjct: 167 PAKDLVSWNSMLTGYTRNGEMRLGLQFFEEM----AERDVVSWNLMVDGFVEVGDLNSSW 222
Query: 252 SMHSLLLKSGYNNEDPLDNLLVSM---YTKCGDLELARRVFDAVLEKSVFLWTSMIGGYA 308
+ +P V+M + + G + ARR+FD + ++V W +MI Y
Sbjct: 223 EFFEKI-------PNPNTVSWVTMLCGFARFGKIAEARRLFDQMPIRNVVAWNAMIAAYV 275
Query: 309 QLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLE-SNR 367
Q + EA++LF + + N + T ++ +G L + +++ LN + N
Sbjct: 276 QNCHVDEAISLFMEMPEK----NSISWTTVINGYVRMGKLDEARQL-----LNQMPYRNV 326
Query: 368 QVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHV 427
QT++I + + R++ A+++F ++ +D+ W+ MI GY+ G D+AL+LF +M
Sbjct: 327 AAQTAMISGYVQNKRMDDARQIFNQISIRDVVCWNTMIAGYSQCGRMDEALHLFKQM--- 383
Query: 428 EGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFD 487
+K D V + +++++ + G +D + F+ M+ E +I + L+ L + G +
Sbjct: 384 --VKKDIVSWNTMVASYAQVGQMDAAIKIFEEMK-----EKNIVSWNSLISGLTQNGSYL 436
Query: 488 LALKTIHEMPVEVQA---QVWAPLLSACMKHHNVELGE 522
ALK+ M E Q +A LS+C +++G+
Sbjct: 437 DALKSFMLMGHEGQKPDQSTFACGLSSCAHLAALQVGK 474
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 104/223 (46%), Gaps = 13/223 (5%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+I T NGS+ + L ++ M G + TF L +CA++ ++ GK++H V+K G
Sbjct: 425 LISGLTQNGSYLDALKSFMLMGHEGQKPDQSTFACGLSSCAHLAALQVGKQLHQLVMKSG 484
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+ D FV LI MY+KC S+ + + + VVSWNS+I+A++ EA+ +
Sbjct: 485 YATDLFVSNALITMYAKCGSISSAELLFKD--IDHFDVVSWNSLIAAYALNGNGREALKL 542
Query: 121 LKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
+M V G+ TFV ++S CS QG+ + C+ + N PLA M
Sbjct: 543 FHKMEVEGVAPDEVTFVGILSACSHVGLIDQGLKLFKCMVQ---AYNIEPLAEHYACMVD 599
Query: 177 KFGKVNEARSIFDEIGETSIVS----WTTIIGGYVNVGNVNEA 215
G+ F + I + W ++G GN+ A
Sbjct: 600 LLGRAGRLEEAFQLVRGMKINANAGIWGALLGACRIHGNLELA 642
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 44/199 (22%), Positives = 92/199 (46%), Gaps = 23/199 (11%)
Query: 344 ELGSLSKGKEIEEYIVL--NGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVW 401
++ L K +I+E I + + N S+I F+K GRI+ A+++F+ +P +++ W
Sbjct: 21 KITQLGKSGQIDEAIKVFQHMTHKNTVTHNSMISAFAKNGRISDARQLFDGMPQRNIVSW 80
Query: 402 SAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQ 461
++MI Y + ++A LF KM D +T +++ + +G + + F +
Sbjct: 81 NSMIAAYLHNDRVEEARQLFDKMP-----TRDLYSWTLMITCYTRNGELAKARNLFNLL- 134
Query: 462 SNFGIEPSIEHYLC---LVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNV 518
P + +C +V + +FD A + MP + W +L+ ++ +
Sbjct: 135 ------PYKWNPVCCNAMVAGYAKNRQFDEARRLFDAMPAKDLVS-WNSMLTGYTRNGEM 187
Query: 519 ELG-----EYAAKNLLTLN 532
LG E A +++++ N
Sbjct: 188 RLGLQFFEEMAERDVVSWN 206
>gi|356498444|ref|XP_003518062.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Glycine max]
Length = 634
Score = 329 bits (843), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 182/546 (33%), Positives = 299/546 (54%), Gaps = 12/546 (2%)
Query: 83 SSRKVLDEMPVRLRSVVSWNS--IISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVV 140
S+ K + + P RL S NS +++ H EA+L M + GL+ + + +V+
Sbjct: 10 STHKAIFQKP-RLLSTFPSNSHHVLNIHIHDTRLREALL---HMALRGLDTNFQDYNTVL 65
Query: 141 SGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSI 196
+ C + R+G +H + K L + L ++ Y K + +AR +FD + E ++
Sbjct: 66 NECLRKRAIREGQRVHAHMIKTHYLPC-VYLRTRLIVFYVKCDSLRDARHVFDVMPERNV 124
Query: 197 VSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSL 256
VSWT +I Y G ++A L QM R P+ F ++ C L +HS
Sbjct: 125 VSWTAMISAYSQRGYASQALSLFVQMLRSGTEPNEFTFATVLTSCIGSSGFVLGRQIHSH 184
Query: 257 LLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEA 316
++K Y + + L+ MY K G + AR +F + E+ V T++I GYAQLG EA
Sbjct: 185 IIKLNYEAHVYVGSSLLDMYAKDGKIHEARGIFQCLPERDVVSCTAIISGYAQLGLDEEA 244
Query: 317 VNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHM 376
+ LF+RL + ++ N T + L+A + L +L GK++ +++ + + S +Q SLI M
Sbjct: 245 LELFRRLQREGMQSNYVTYTSVLTALSGLAALDHGKQVHNHLLRSEVPSYVVLQNSLIDM 304
Query: 377 FSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVV 436
+SKCG + A+ +F+ + ++ + W+AM+ GY+ HG G + L LF M +KPD+V
Sbjct: 305 YSKCGNLTYARRIFDTLHERTVISWNAMLVGYSKHGEGREVLELFNLMIDENKVKPDSVT 364
Query: 437 YTSILSACSHSGMVDDGLSFFKSMQS-NFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHE 495
++LS CSH G+ D G+ F M S ++P +HY C+VD+LGRAGR + A + + +
Sbjct: 365 VLAVLSGCSHGGLEDKGMDIFYDMTSGKISVQPDSKHYGCVVDMLGRAGRVEAAFEFVKK 424
Query: 496 MPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEA 555
MP E A +W LL AC H N+++GE+ LL + P + GNY++++NL+ SAG W++
Sbjct: 425 MPFEPSAAIWGCLLGACSVHSNLDIGEFVGHQLLQIEPENAGNYVILSNLYASAGRWEDV 484
Query: 556 ATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKELHIKLLEAGYI 615
+ R LM + +TKEPG S +E+D + F A D SH ++ ++EL + EAGY+
Sbjct: 485 RSLRNLMLKKAVTKEPGRSWIELDQVLHTFHASDCSHPRREEVSAKVQELSARFKEAGYV 544
Query: 616 AEADIV 621
+ V
Sbjct: 545 PDLSCV 550
Score = 199 bits (506), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 122/400 (30%), Positives = 214/400 (53%), Gaps = 13/400 (3%)
Query: 21 MLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSD 80
M G+ N + VL C +I +G+RVH+H++K + +++T LI Y KC
Sbjct: 49 MALRGLDTNFQDYNTVLNECLRKRAIREGQRVHAHMIKTHYLPCVYLRTRLIVFYVKCDS 108
Query: 81 FVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVV 140
+R V D MP R+VVSW ++ISA+S+ +A+ + +M G E + TF +V+
Sbjct: 109 LRDARHVFDVMPE--RNVVSWTAMISAYSQRGYASQALSLFVQMLRSGTEPNEFTFATVL 166
Query: 141 SGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSI 196
+ C F G +H + KL + + +S++ MYAK GK++EAR IF + E +
Sbjct: 167 TSCIGSSGFVLGRQIHSHIIKLN-YEAHVYVGSSLLDMYAKDGKIHEARGIFQCLPERDV 225
Query: 197 VSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSL 256
VS T II GY +G EA L +++R + + V + +++ + + L +H+
Sbjct: 226 VSCTAIISGYAQLGLDEEALELFRRLQREGMQSNYVTYTSVLTALSGLAALDHGKQVHNH 285
Query: 257 LLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEA 316
LL+S + L N L+ MY+KCG+L ARR+FD + E++V W +M+ GY++ G E
Sbjct: 286 LLRSEVPSYVVLQNSLIDMYSKCGNLTYARRIFDTLHERTVISWNAMLVGYSKHGEGREV 345
Query: 317 VNLFKRLL-KTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNG---LESNRQVQTS 372
+ LF ++ + V+P+ T+ LS C+ G KG +I Y + +G ++ + +
Sbjct: 346 LELFNLMIDENKVKPDSVTVLAVLSGCSHGGLEDKGMDI-FYDMTSGKISVQPDSKHYGC 404
Query: 373 LIHMFSKCGRINKAKEVFERVP-DKDLAVWSAMINGYAIH 411
++ M + GR+ A E +++P + A+W ++ ++H
Sbjct: 405 VVDMLGRAGRVEAAFEFVKKMPFEPSAAIWGCLLGACSVH 444
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 78/250 (31%), Positives = 133/250 (53%), Gaps = 8/250 (3%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI + G + LS + ML++G N FTF VL +C + G+++HSH++K+
Sbjct: 130 MISAYSQRGYASQALSLFVQMLRSGTEPNEFTFATVLTSCIGSSGFVLGRQIHSHIIKLN 189
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
++ +V + L+DMY+K +R + +P R VVS +IIS +++ L++EA+ +
Sbjct: 190 YEAHVYVGSSLLDMYAKDGKIHEARGIFQCLPE--RDVVSCTAIISGYAQLGLDEEALEL 247
Query: 121 LKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGLLNNEIP----LANSVMSMYA 176
+ + G++ + T+ SV++ S + V+ LL +E+P L NS++ MY+
Sbjct: 248 FRRLQREGMQSNYVTYTSVLTALSGLAALDHGKQVHN-HLLRSEVPSYVVLQNSLIDMYS 306
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQM-RRMSVTPDLVVFL 235
K G + AR IFD + E +++SW ++ GY G E L N M V PD V L
Sbjct: 307 KCGNLTYARRIFDTLHERTVISWNAMLVGYSKHGEGREVLELFNLMIDENKVKPDSVTVL 366
Query: 236 NLILGCAQVG 245
++ GC+ G
Sbjct: 367 AVLSGCSHGG 376
>gi|302141697|emb|CBI18900.3| unnamed protein product [Vitis vinifera]
Length = 637
Score = 328 bits (842), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 163/456 (35%), Positives = 278/456 (60%), Gaps = 2/456 (0%)
Query: 167 LANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMS 226
+ + ++SMY K G +A+ +FDE+ +VSW +++ G G + +MR S
Sbjct: 99 IGDRLVSMYFKLGYDEDAQRLFDEMPNKDLVSWNSLMSGLSGRGYLGACLNAFCRMRTES 158
Query: 227 -VTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELA 285
P+ V L+++ CA +G L S+H +++K G + + + N L++MY K G L+ A
Sbjct: 159 GRQPNEVTLLSVVSACADMGALDEGKSLHGVVVKLGMSGKAKVVNSLINMYGKLGFLDAA 218
Query: 286 RRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAEL 345
++F+ + +S+ W SM+ + GY + ++LF + + + P++AT+ L AC +
Sbjct: 219 SQLFEEMPVRSLVSWNSMVVIHNHNGYAEKGMDLFNLMKRAGINPDQATMVALLRACTDT 278
Query: 346 GSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMI 405
G + + I YI G ++ + T+L+++++K GR+N ++++FE + D+D W+AM+
Sbjct: 279 GLGRQAESIHAYIHRCGFNADIIIATALLNLYAKLGRLNASEDIFEEIKDRDRIAWTAML 338
Query: 406 NGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFG 465
GYA+H G +A+ LF M EG++ D V +T +LSACSHSG+V++G +F+ M +
Sbjct: 339 AGYAVHACGREAIKLFDLMVK-EGVEVDHVTFTHLLSACSHSGLVEEGKKYFEIMSEVYR 397
Query: 466 IEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAA 525
+EP ++HY C+VDLLGR+GR + A + I MP+E + VW LL AC + NVELG+ A
Sbjct: 398 VEPRLDHYSCMVDLLGRSGRLEDAYELIKSMPMEPSSGVWGALLGACRVYGNVELGKEVA 457
Query: 526 KNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVF 585
+ LL+L+P NYI+++N++++AG+W++A+ R LM +RRLT+ PG S +E + F
Sbjct: 458 EQLLSLDPSDHRNYIMLSNIYSAAGLWRDASKVRALMKERRLTRNPGCSFIEHGNKIHRF 517
Query: 586 VAGDRSHHLSVDIRKTLKELHIKLLEAGYIAEADIV 621
V GD+ H S +I L+EL K+ EAG + + V
Sbjct: 518 VVGDQLHPRSDEIHTKLEELIRKIREAGCAPKTEFV 553
Score = 159 bits (401), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 103/372 (27%), Positives = 190/372 (51%), Gaps = 18/372 (4%)
Query: 52 VHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSR- 110
+H+ V+K D F+ L+ MY K ++++ DEMP + +VSWNS++S S
Sbjct: 84 IHARVIKSLNYSDGFIGDRLVSMYFKLGYDEDAQRLFDEMPNK--DLVSWNSLMSGLSGR 141
Query: 111 ----ACLNDEAILVLKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLN 162
ACLN + + G + + T +SVVS C+ +G S+H V KLG+ +
Sbjct: 142 GYLGACLNAFCRMRTES----GRQPNEVTLLSVVSACADMGALDEGKSLHGVVVKLGM-S 196
Query: 163 NEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQM 222
+ + NS+++MY K G ++ A +F+E+ S+VSW +++ + + G + L N M
Sbjct: 197 GKAKVVNSLINMYGKLGFLDAASQLFEEMPVRSLVSWNSMVVIHNHNGYAEKGMDLFNLM 256
Query: 223 RRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDL 282
+R + PD + L+ C G A S+H+ + + G+N + + L+++Y K G L
Sbjct: 257 KRAGINPDQATMVALLRACTDTGLGRQAESIHAYIHRCGFNADIIIATALLNLYAKLGRL 316
Query: 283 ELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSAC 342
+ +F+ + ++ WT+M+ GYA EA+ LF ++K V + T LSAC
Sbjct: 317 NASEDIFEEIKDRDRIAWTAMLAGYAVHACGREAIKLFDLMVKEGVEVDHVTFTHLLSAC 376
Query: 343 AELGSLSKGKEIEEYIV-LNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVP-DKDLAV 400
+ G + +GK+ E + + +E + ++ + + GR+ A E+ + +P + V
Sbjct: 377 SHSGLVEEGKKYFEIMSEVYRVEPRLDHYSCMVDLLGRSGRLEDAYELIKSMPMEPSSGV 436
Query: 401 WSAMINGYAIHG 412
W A++ ++G
Sbjct: 437 WGALLGACRVYG 448
Score = 125 bits (315), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 86/309 (27%), Positives = 160/309 (51%), Gaps = 12/309 (3%)
Query: 6 TNNGSFEETLSTYSSM-LQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQD 64
+ G L+ + M ++G N T V+ ACA++ ++ +GK +H V+K+G
Sbjct: 139 SGRGYLGACLNAFCRMRTESGRQPNEVTLLSVVSACADMGALDEGKSLHGVVVKLGMSGK 198
Query: 65 AFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEM 124
A V LI+MY K ++ ++ +EMPV RS+VSWNS++ H+ ++ + + M
Sbjct: 199 AKVVNSLINMYGKLGFLDAASQLFEEMPV--RSLVSWNSMVVIHNHNGYAEKGMDLFNLM 256
Query: 125 WVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGK 180
G+ +T V+++ C+ RQ S+H +++ G N +I +A +++++YAK G+
Sbjct: 257 KRAGINPDQATMVALLRACTDTGLGRQAESIHAYIHRCG-FNADIIIATALLNLYAKLGR 315
Query: 181 VNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILG 240
+N + IF+EI + ++WT ++ GY EA L + M + V D V F +L+
Sbjct: 316 LNASEDIFEEIKDRDRIAWTAMLAGYAVHACGREAIKLFDLMVKEGVEVDHVTFTHLLSA 375
Query: 241 CAQVGNLFLALSMHSLLLKSGYNNEDPLDNL--LVSMYTKCGDLELARRVFDAV-LEKSV 297
C+ G L + ++ Y E LD+ +V + + G LE A + ++ +E S
Sbjct: 376 CSHSG-LVEEGKKYFEIMSEVYRVEPRLDHYSCMVDLLGRSGRLEDAYELIKSMPMEPSS 434
Query: 298 FLWTSMIGG 306
+W +++G
Sbjct: 435 GVWGALLGA 443
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 79/265 (29%), Positives = 140/265 (52%), Gaps = 4/265 (1%)
Query: 252 SMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLG 311
++H+ ++KS ++ + + LVSMY K G E A+R+FD + K + W S++ G + G
Sbjct: 83 AIHARVIKSLNYSDGFIGDRLVSMYFKLGYDEDAQRLFDEMPNKDLVSWNSLMSGLSGRG 142
Query: 312 YPSEAVNLFKRLLKTSVR-PNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQ 370
Y +N F R+ S R PNE TL + +SACA++G+L +GK + +V G+ +V
Sbjct: 143 YLGACLNAFCRMRTESGRQPNEVTLLSVVSACADMGALDEGKSLHGVVVKLGMSGKAKVV 202
Query: 371 TSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGL 430
SLI+M+ K G ++ A ++FE +P + L W++M+ + +G ++ ++LF M+ G+
Sbjct: 203 NSLINMYGKLGFLDAASQLFEEMPVRSLVSWNSMVVIHNHNGYAEKGMDLFNLMKRA-GI 261
Query: 431 KPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLAL 490
PD ++L AC+ +G+ S + G I L++L + GR + A
Sbjct: 262 NPDQATMVALLRACTDTGLGRQAESIHAYIH-RCGFNADIIIATALLNLYAKLGRLN-AS 319
Query: 491 KTIHEMPVEVQAQVWAPLLSACMKH 515
+ I E + W +L+ H
Sbjct: 320 EDIFEEIKDRDRIAWTAMLAGYAVH 344
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/234 (20%), Positives = 110/234 (47%), Gaps = 9/234 (3%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
M+ +NG E+ + ++ M + G++ + T +L+AC + + +H+++ + G
Sbjct: 236 MVVIHNHNGYAEKGMDLFNLMKRAGINPDQATMVALLRACTDTGLGRQAESIHAYIHRCG 295
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F D + T L+++Y+K +S + +E+ R R ++W ++++ ++ EAI +
Sbjct: 296 FNADIIIATALLNLYAKLGRLNASEDIFEEIKDRDR--IAWTAMLAGYAVHACGREAIKL 353
Query: 121 LKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
M G+E+ TF ++S CS +G + ++ + + + ++ +
Sbjct: 354 FDLMVKEGVEVDHVTFTHLLSACSHSGLVEEGKKYFEIMSEVYRVEPRLDHYSCMVDLLG 413
Query: 177 KFGKVNEARSIFDEIG-ETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTP 229
+ G++ +A + + E S W ++G GNV + Q+ +S+ P
Sbjct: 414 RSGRLEDAYELIKSMPMEPSSGVWGALLGACRVYGNVELGKEVAEQL--LSLDP 465
>gi|449437930|ref|XP_004136743.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Cucumis sativus]
Length = 666
Score = 328 bits (842), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 178/506 (35%), Positives = 282/506 (55%), Gaps = 6/506 (1%)
Query: 121 LKEMWVLGLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
L +M +LG E+ + ++++ C + R+G +H + K L + + L ++ +Y
Sbjct: 78 LLQMAILGREVKFEGYDTILNECVSQRAIREGQRVHTHMIKTCYLPS-VYLRTRLIVLYN 136
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K + +AR +FDE+ + ++VSWT +I Y G EA L +M R P+ F
Sbjct: 137 KCDCLGDAREMFDEMPQKNVVSWTAMISAYSQRGFAFEALNLFVEMLRSDTEPNHFTFAT 196
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
++ C +HS+ +K Y + + + L+ MY K G + A VF + E+
Sbjct: 197 ILTSCYGSLGFETGRQIHSIAIKRNYESHMFVGSSLLDMYAKSGRICDAHGVFHCLPERD 256
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEE 356
V T++I GYAQ+G EA+ LF++L + N T A+ L+A + L +L+ GK++
Sbjct: 257 VVACTAIISGYAQMGLDEEALKLFRQLQIEGMNSNSVTYASVLTALSGLAALNHGKQVHS 316
Query: 357 YIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQ 416
+++ +G S + SLI M+SKCG + A+ +F+ +P++ W+AM+ GY+ HGM +
Sbjct: 317 HVLRSGQYSYVVLLNSLIDMYSKCGNVCYARRIFDSMPERTCISWNAMLVGYSKHGMARE 376
Query: 417 ALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSM-QSNFGIEPSIEHYLC 475
L LF M+ +KPD++ Y ++LS CSH + D GL F +M GIEP I HY C
Sbjct: 377 VLELFKLMREENKVKPDSITYLAVLSGCSHGQLEDMGLEIFYNMVNGKDGIEPDIGHYGC 436
Query: 476 LVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGS 535
+VDLLGRAGR + A I +MP A +W LL +C H +VE+G + LL L P +
Sbjct: 437 VVDLLGRAGRVEEAFDFIKKMPFVPTAAIWGSLLGSCRVHSDVEIGIIVGQKLLELEPEN 496
Query: 536 TGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLS 595
GNY++++NL+ SAG W++ R LM ++ +TKEPG S VE+D V F A D +H
Sbjct: 497 AGNYVILSNLYASAGKWEDMRNIRDLMQEKAVTKEPGRSWVELDQIVHTFHASDHTHPRR 556
Query: 596 VDIRKTLKELHIKLLEAGYIAEADIV 621
++ K +KEL IK E GY+ + V
Sbjct: 557 EEVAKKVKELSIKFKEDGYVPDLSCV 582
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 113/403 (28%), Positives = 213/403 (52%), Gaps = 14/403 (3%)
Query: 20 SMLQTGVHGNSFTFP---LVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYS 76
++LQ + G F +L C + +I +G+RVH+H++K + +++T LI +Y+
Sbjct: 77 ALLQMAILGREVKFEGYDTILNECVSQRAIREGQRVHTHMIKTCYLPSVYLRTRLIVLYN 136
Query: 77 KCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTF 136
KC +R++ DEMP ++VVSW ++ISA+S+ EA+ + EM E + TF
Sbjct: 137 KCDCLGDAREMFDEMP--QKNVVSWTAMISAYSQRGFAFEALNLFVEMLRSDTEPNHFTF 194
Query: 137 VSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIG 192
++++ C F G +H K + + + +S++ MYAK G++ +A +F +
Sbjct: 195 ATILTSCYGSLGFETGRQIHSIAIKRN-YESHMFVGSSLLDMYAKSGRICDAHGVFHCLP 253
Query: 193 ETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALS 252
E +V+ T II GY +G EA L Q++ + + V + +++ + + L
Sbjct: 254 ERDVVACTAIISGYAQMGLDEEALKLFRQLQIEGMNSNSVTYASVLTALSGLAALNHGKQ 313
Query: 253 MHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGY 312
+HS +L+SG + L N L+ MY+KCG++ ARR+FD++ E++ W +M+ GY++ G
Sbjct: 314 VHSHVLRSGQYSYVVLLNSLIDMYSKCGNVCYARRIFDSMPERTCISWNAMLVGYSKHGM 373
Query: 313 PSEAVNLFKRLL-KTSVRPNEATLATTLSACAELGSLSKGKEIEEYIV--LNGLESNRQV 369
E + LFK + + V+P+ T LS C+ G EI +V +G+E +
Sbjct: 374 AREVLELFKLMREENKVKPDSITYLAVLSGCSHGQLEDMGLEIFYNMVNGKDGIEPDIGH 433
Query: 370 QTSLIHMFSKCGRINKAKEVFERVP-DKDLAVWSAMINGYAIH 411
++ + + GR+ +A + +++P A+W +++ +H
Sbjct: 434 YGCVVDLLGRAGRVEEAFDFIKKMPFVPTAAIWGSLLGSCRVH 476
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 88/313 (28%), Positives = 158/313 (50%), Gaps = 14/313 (4%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI + G E L+ + ML++ N FTF +L +C G+++HS +K
Sbjct: 162 MISAYSQRGFAFEALNLFVEMLRSDTEPNHFTFATILTSCYGSLGFETGRQIHSIAIKRN 221
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
++ FV + L+DMY+K + V +P R VV+ +IIS +++ L++EA+ +
Sbjct: 222 YESHMFVGSSLLDMYAKSGRICDAHGVFHCLPE--RDVVACTAIISGYAQMGLDEEALKL 279
Query: 121 LKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
+++ + G+ ++ T+ SV++ S G +H V + G + + L NS++ MY+
Sbjct: 280 FRQLQIEGMNSNSVTYASVLTALSGLAALNHGKQVHSHVLRSGQYSY-VVLLNSLIDMYS 338
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMS-VTPDLVVFL 235
K G V AR IFD + E + +SW ++ GY G E L MR + V PD + +L
Sbjct: 339 KCGNVCYARRIFDSMPERTCISWNAMLVGYSKHGMAREVLELFKLMREENKVKPDSITYL 398
Query: 236 NLILGCA--QVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVL 293
++ GC+ Q+ ++ L + + + K G + +V + + G +E A FD +
Sbjct: 399 AVLSGCSHGQLEDMGLEIFYNMVNGKDGIEPDIGHYGCVVDLLGRAGRVEEA---FD-FI 454
Query: 294 EKSVFLWTSMIGG 306
+K F+ T+ I G
Sbjct: 455 KKMPFVPTAAIWG 467
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 76/287 (26%), Positives = 134/287 (46%), Gaps = 33/287 (11%)
Query: 12 EETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGL 71
EE L + + G++ NS T+ VL A + + ++ GK+VHSHVL+ G + L
Sbjct: 274 EEALKLFRQLQIEGMNSNSVTYASVLTALSGLAALNHGKQVHSHVLRSGQYSYVVLLNSL 333
Query: 72 IDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLG-LE 130
IDMYSKC + +R++ D MP R+ +SWN+++ +S+ + E + + K M ++
Sbjct: 334 IDMYSKCGNVCYARRIFDSMPE--RTCISWNAMLVGYSKHGMAREVLELFKLMREENKVK 391
Query: 131 LSASTFVSVVSGCSFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDE 190
+ T+++V+SGCS G L + M + + VN I +
Sbjct: 392 PDSITYLAVLSGCSH-------------GQLED--------MGLEIFYNMVNGKDGIEPD 430
Query: 191 IGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLA 250
IG V ++G G V EAF +++M P ++ +L+ C ++ +
Sbjct: 431 IGHYGCV--VDLLG---RAGRVEEAFDF---IKKMPFVPTAAIWGSLLGSCRVHSDVEIG 482
Query: 251 LSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSV 297
+ + LL+ N +L ++Y G E R + D + EK+V
Sbjct: 483 IIVGQKLLELEPENAGNY-VILSNLYASAGKWEDMRNIRDLMQEKAV 528
>gi|414881621|tpg|DAA58752.1| TPA: hypothetical protein ZEAMMB73_723286 [Zea mays]
Length = 1058
Score = 328 bits (842), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 201/618 (32%), Positives = 336/618 (54%), Gaps = 20/618 (3%)
Query: 12 EETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKR----VHSHVLKVGFQQ-DAF 66
EE + + T V N+ T+ ++L A A + +G R VH H+L+ G
Sbjct: 358 EEAVKIFVGTRNT-VDVNADTYVVLLSALAEYSISEEGLRIGRVVHGHMLRTGLTDLKIA 416
Query: 67 VQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWV 126
V GL++MY+KC S+ K+ M R +SWN+IISA + +EA++ M
Sbjct: 417 VSNGLVNMYAKCGAIESASKIFQLMEATDR--ISWNTIISALDQNGNCEEAVMHYSLMRQ 474
Query: 127 LGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVN 182
+ S +S +S C+ G +HC K GL + + ++N ++ MY + G ++
Sbjct: 475 SCISPSNFALISSLSSCAGLKLLTAGQQVHCDAVKWGL-DLDTSVSNVLVKMYGECGAMS 533
Query: 183 EARSIFDEIGETSIVSWTTIIGGYVNVGN-VNEAFGLCNQMRRMSVTPDLVVFLNLILGC 241
+ +F+ + E VSW T++G + ++E + N M R + P+ V F+NL+
Sbjct: 534 DYWKVFNSMAEHDEVSWNTMMGVMASSQTPISEIVKVFNNMMRGGLIPNKVTFINLLAAL 593
Query: 242 AQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEK-SVFLW 300
+ + L L +H+ ++K G ++ +DN L+S Y K GD+ +F + ++ W
Sbjct: 594 SPLSVLELGKQVHAAVMKHGVMEDNVVDNALISCYAKSGDMGSCEHLFTNMSDRRDAISW 653
Query: 301 TSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVL 360
SMI GY G EA++ ++ + + T + L+ACA + +L +G E+ + +
Sbjct: 654 NSMISGYIYNGNLQEAMDCVWLMIHSGQIMDCCTFSIILNACASVAALERGMELHAFGIR 713
Query: 361 NGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNL 420
+ LES+ V+++L+ M+SKCGR++ A ++F + ++ W++MI+GYA HG+G +A+ +
Sbjct: 714 SHLESDVVVESALVDMYSKCGRVDYASKLFNSMTQRNEFSWNSMISGYARHGLGRKAIEI 773
Query: 421 FYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLL 480
F +M PD V + S+LSACSH+G+V+ GL +F+ M + GI P IEHY C++DLL
Sbjct: 774 FEEMLRSRE-SPDHVTFVSVLSACSHAGLVERGLEYFE-MMPDHGILPQIEHYSCVIDLL 831
Query: 481 GRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHH---NVELGEYAAKNLLTLNPGSTG 537
GRAG+ D + I MP+E A +W +L AC + N++LG A++ LL + P +
Sbjct: 832 GRAGKIDKIKEYIQRMPIEPNALIWRTVLVACRQSKDGSNIDLGREASRVLLEIEPQNPV 891
Query: 538 NYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVD 597
NY+L +N + GMW++ A AR M KE G S V ++ V F+AGDRSH + +
Sbjct: 892 NYVLASNFHAATGMWEDTAKARTAMRQATEKKEAGRSWVTLNDGVHTFIAGDRSHPNTKE 951
Query: 598 IRKTLKELHIKLLEAGYI 615
I + L L + AGY+
Sbjct: 952 IYEKLNFLIQNIRNAGYV 969
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 111/407 (27%), Positives = 210/407 (51%), Gaps = 12/407 (2%)
Query: 7 NNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAF 66
NG+ EE + YS M Q+ + ++F L +CA + + G++VH +K G D
Sbjct: 458 QNGNCEEAVMHYSLMRQSCISPSNFALISSLSSCAGLKLLTAGQQVHCDAVKWGLDLDTS 517
Query: 67 VQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSI--ISAHSRACLNDEAILVLKEM 124
V L+ MY +C KV + M VSWN++ + A S+ ++ E + V M
Sbjct: 518 VSNVLVKMYGECGAMSDYWKVFNSMAEH--DEVSWNTMMGVMASSQTPIS-EIVKVFNNM 574
Query: 125 WVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGK 180
GL + TF+++++ S G +H V K G++ + + + N+++S YAK G
Sbjct: 575 MRGGLIPNKVTFINLLAALSPLSVLELGKQVHAAVMKHGVMEDNV-VDNALISCYAKSGD 633
Query: 181 VNEARSIFDEIGET-SIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLIL 239
+ +F + + +SW ++I GY+ GN+ EA M D F ++
Sbjct: 634 MGSCEHLFTNMSDRRDAISWNSMISGYIYNGNLQEAMDCVWLMIHSGQIMDCCTFSIILN 693
Query: 240 GCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFL 299
CA V L + +H+ ++S ++ +++ LV MY+KCG ++ A ++F+++ +++ F
Sbjct: 694 ACASVAALERGMELHAFGIRSHLESDVVVESALVDMYSKCGRVDYASKLFNSMTQRNEFS 753
Query: 300 WTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIV 359
W SMI GYA+ G +A+ +F+ +L++ P+ T + LSAC+ G + +G E E +
Sbjct: 754 WNSMISGYARHGLGRKAIEIFEEMLRSRESPDHVTFVSVLSACSHAGLVERGLEYFEMMP 813
Query: 360 LNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVP-DKDLAVWSAMI 405
+G+ + + +I + + G+I+K KE +R+P + + +W ++
Sbjct: 814 DHGILPQIEHYSCVIDLLGRAGKIDKIKEYIQRMPIEPNALIWRTVL 860
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 115/459 (25%), Positives = 218/459 (47%), Gaps = 25/459 (5%)
Query: 8 NGSFEETLSTYSSML---QTGVHGNSFTFPLVLKACAN--INSIWDGKRVHSHVLKVGFQ 62
+G EE + +ML Q G SFTF +L+AC + + + +VH V K +
Sbjct: 140 HGIAEEAFRVFRAMLREVQAGCRPTSFTFGTLLRACQDGGPDRLGFAVQVHGLVSKTEYA 199
Query: 63 QDAFVQTGLIDMYSKCS--DFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+ V LI MY C+ + +++V D P+ R +++WN+++S +++ +
Sbjct: 200 SNTTVCNALISMYGSCTVGPPILAQRVFDGTPI--RDLITWNALMSVYAKKGDVASTFTL 257
Query: 121 LKEMW----VLGLELSASTFVSVVSGCSFRQGI-----SMHCCVYKLGLLNNEIPLANSV 171
K+M + L + TF S+++ S G + V K G ++++ + +++
Sbjct: 258 FKDMQRGDSRIQLRPTEHTFGSLITAASLSSGSSAVLDQVLVWVLKSG-CSSDLYVGSAL 316
Query: 172 MSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRR-MSVTPD 230
+S +A+ G +EA+ IF + + + V+ +I G V EA + R + V D
Sbjct: 317 VSAFARHGLTDEAKDIFLSLKQKNAVTLNGLIVGLVRQDFSEEAVKIFVGTRNTVDVNAD 376
Query: 231 LVVFLNLILGCAQVGN--LFLALSMHSLLLKSGYNN-EDPLDNLLVSMYTKCGDLELARR 287
V L L + L + +H +L++G + + + N LV+MY KCG +E A +
Sbjct: 377 TYVVLLSALAEYSISEEGLRIGRVVHGHMLRTGLTDLKIAVSNGLVNMYAKCGAIESASK 436
Query: 288 VFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGS 347
+F + W ++I Q G EAV + + ++ + P+ L ++LS+CA L
Sbjct: 437 IFQLMEATDRISWNTIISALDQNGNCEEAVMHYSLMRQSCISPSNFALISSLSSCAGLKL 496
Query: 348 LSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMING 407
L+ G+++ V GL+ + V L+ M+ +CG ++ +VF + + D W+ M+
Sbjct: 497 LTAGQQVHCDAVKWGLDLDTSVSNVLVKMYGECGAMSDYWKVFNSMAEHDEVSWNTMMGV 556
Query: 408 YAIHGMG-DQALNLFYKMQHVEGLKPDAVVYTSILSACS 445
A + + +F M GL P+ V + ++L+A S
Sbjct: 557 MASSQTPISEIVKVFNNMMR-GGLIPNKVTFINLLAALS 594
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 106/420 (25%), Positives = 202/420 (48%), Gaps = 25/420 (5%)
Query: 150 SMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNV 209
++H + K GL N+++ L N +++ YAK ++ A +FDE+ E + VSWT ++ GYV
Sbjct: 82 NLHVELIKRGL-NHDLFLCNHLVNSYAKGARLAAASQVFDEMPERNAVSWTCLVSGYVLH 140
Query: 210 GNVNEAFGLCNQMRR---MSVTPDLVVFLNLILGCAQVG--NLFLALSMHSLLLKSGYNN 264
G EAF + M R P F L+ C G L A+ +H L+ K+ Y +
Sbjct: 141 GIAEEAFRVFRAMLREVQAGCRPTSFTFGTLLRACQDGGPDRLGFAVQVHGLVSKTEYAS 200
Query: 265 EDPLDNLLVSMYTKC--GDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKR 322
+ N L+SMY C G LA+RVFD + + W +++ YA+ G + LFK
Sbjct: 201 NTTVCNALISMYGSCTVGPPILAQRVFDGTPIRDLITWNALMSVYAKKGDVASTFTLFKD 260
Query: 323 LL----KTSVRPNEATLATTLSACAELGSLSKG-KEIEEYIVLNGLESNRQVQTSLIHMF 377
+ + +RP E T + ++A + S ++ +++ +G S+ V ++L+ F
Sbjct: 261 MQRGDSRIQLRPTEHTFGSLITAASLSSGSSAVLDQVLVWVLKSGCSSDLYVGSALVSAF 320
Query: 378 SKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVY 437
++ G ++AK++F + K+ + +I G ++A+ +F ++ + D Y
Sbjct: 321 ARHGLTDEAKDIFLSLKQKNAVTLNGLIVGLVRQDFSEEAVKIFVGTRNTVDVNAD--TY 378
Query: 438 TSILSACSHSGMVDDGLSFFKSMQSNF---GI-EPSIEHYLCLVDLLGRAGRFDLALKTI 493
+LSA + + ++GL + + + G+ + I LV++ + G + A K
Sbjct: 379 VVLLSALAEYSISEEGLRIGRVVHGHMLRTGLTDLKIAVSNGLVNMYAKCGAIESASKIF 438
Query: 494 HEMPVEVQAQVWAPLLSACMKHHNVE--LGEYAAKNLLTLNPGSTGNYILMANLFTSAGM 551
M + W ++SA ++ N E + Y+ ++P N+ L+++L + AG+
Sbjct: 439 QLMEATDRIS-WNTIISALDQNGNCEEAVMHYSLMRQSCISP---SNFALISSLSSCAGL 494
Score = 112 bits (280), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 102/417 (24%), Positives = 194/417 (46%), Gaps = 26/417 (6%)
Query: 50 KRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHS 109
+ +H ++K G D F+ L++ Y+K + ++ +V DEMP R+ VSW ++S +
Sbjct: 81 ENLHVELIKRGLNHDLFLCNHLVNSYAKGARLAAASQVFDEMPE--RNAVSWTCLVSGYV 138
Query: 110 RACLNDEAILVLKEMW---VLGLELSASTFVSVVSGCS----FRQG--ISMHCCVYKLGL 160
+ +EA V + M G ++ TF +++ C R G + +H V K
Sbjct: 139 LHGIAEEAFRVFRAMLREVQAGCRPTSFTFGTLLRACQDGGPDRLGFAVQVHGLVSKTEY 198
Query: 161 LNNEIPLANSVMSMYAK--FGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGL 218
+N + N+++SMY G A+ +FD +++W ++ Y G+V F L
Sbjct: 199 ASN-TTVCNALISMYGSCTVGPPILAQRVFDGTPIRDLITWNALMSVYAKKGDVASTFTL 257
Query: 219 CNQMR----RMSVTPDLVVFLNLILGCAQVGNLFLALSMHSL-LLKSGYNNEDPLDNLLV 273
M+ R+ + P F +LI + L + +LKSG +++ + + LV
Sbjct: 258 FKDMQRGDSRIQLRPTEHTFGSLITAASLSSGSSAVLDQVLVWVLKSGCSSDLYVGSALV 317
Query: 274 SMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEA 333
S + + G + A+ +F ++ +K+ +I G + + EAV +F + +V N
Sbjct: 318 SAFARHGLTDEAKDIFLSLKQKNAVTLNGLIVGLVRQDFSEEAVKIFVG-TRNTVDVNAD 376
Query: 334 TLATTLSACAELG----SLSKGKEIEEYIVLNGLESNR-QVQTSLIHMFSKCGRINKAKE 388
T LSA AE L G+ + +++ GL + V L++M++KCG I A +
Sbjct: 377 TYVVLLSALAEYSISEEGLRIGRVVHGHMLRTGLTDLKIAVSNGLVNMYAKCGAIESASK 436
Query: 389 VFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACS 445
+F+ + D W+ +I+ +G ++A+ + Y + + P S LS+C+
Sbjct: 437 IFQLMEATDRISWNTIISALDQNGNCEEAV-MHYSLMRQSCISPSNFALISSLSSCA 492
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 106/208 (50%), Gaps = 8/208 (3%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI NG+ +E + M+ +G + TF ++L ACA++ ++ G +H+ ++
Sbjct: 656 MISGYIYNGNLQEAMDCVWLMIHSGQIMDCCTFSIILNACASVAALERGMELHAFGIRSH 715
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+ D V++ L+DMYSKC + K+ + M R+ SWNS+IS ++R L +AI +
Sbjct: 716 LESDVVVESALVDMYSKCGRVDYASKLFNSMT--QRNEFSWNSMISGYARHGLGRKAIEI 773
Query: 121 LKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
+EM TFVSV+S CS +G+ + G+L +I + V+ +
Sbjct: 774 FEEMLRSRESPDHVTFVSVLSACSHAGLVERGLEYFEMMPDHGIL-PQIEHYSCVIDLLG 832
Query: 177 KFGKVNEARSIFDEIG-ETSIVSWTTII 203
+ GK+++ + + E + + W T++
Sbjct: 833 RAGKIDKIKEYIQRMPIEPNALIWRTVL 860
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/113 (24%), Positives = 62/113 (54%), Gaps = 4/113 (3%)
Query: 346 GSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMI 405
G + + + ++ GL + + L++ ++K R+ A +VF+ +P+++ W+ ++
Sbjct: 75 GDANSPENLHVELIKRGLNHDLFLCNHLVNSYAKGARLAAASQVFDEMPERNAVSWTCLV 134
Query: 406 NGYAIHGMGDQALNLFYKM-QHVE-GLKPDAVVYTSILSACSHSGMVDDGLSF 456
+GY +HG+ ++A +F M + V+ G +P + + ++L AC G D L F
Sbjct: 135 SGYVLHGIAEEAFRVFRAMLREVQAGCRPTSFTFGTLLRACQDGG--PDRLGF 185
>gi|414869047|tpg|DAA47604.1| TPA: putative pentatricopeptide repeat family protein [Zea mays]
Length = 694
Score = 328 bits (842), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 184/566 (32%), Positives = 310/566 (54%), Gaps = 13/566 (2%)
Query: 49 GKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAH 108
G ++ S ++ G + F + L+D+Y+KC +R+V D MPVR ++VSWN+II+ +
Sbjct: 110 GAQLQSFSVRCGLADNVFPASALLDVYAKCGRLGDARRVFDGMPVR--NIVSWNAIIAGY 167
Query: 109 SRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCSFRQGISM----HCCVYKLGLLNNE 164
+ + EA+ + EM +G +TF +++ + + S+ H + K G
Sbjct: 168 TDSRKPAEAMELFLEMQRVGSVPDGTTFAVLLATIAGPRWYSLMRQLHGKIVKYGSALGL 227
Query: 165 IPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGL-CNQMR 223
+ L N+ ++ Y++ + ++R IFD I ++SW +++G Y G +EA MR
Sbjct: 228 VAL-NAAITAYSQCDALADSRKIFDGIESRDLISWNSMLGAYAYHGLDDEAMRFFVRMMR 286
Query: 224 RMSVTPDLVVFLNLILGCAQVG-NLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGD- 281
+ PD+ F + I C++ G + S+HSL++K G P+ N +++MYT+ D
Sbjct: 287 ESGIQPDMYSFTSAISVCSEHGCDDQQGRSIHSLVIKFGLEGVTPVCNAMIAMYTRFADN 346
Query: 282 --LELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTL 339
+E A F +++ K W SM+ GY+ G S+A+ F+ + ++R +E L+ L
Sbjct: 347 CMMEDAYNCFSSLVFKDAVSWNSMLTGYSHHGLSSDALKFFRCMRAENIRTDEFGLSAAL 406
Query: 340 SACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLA 399
+C++L L G+++ +V +G SN V +SLI M+SKCG + A++ FE
Sbjct: 407 RSCSDLAVLRLGRQVHSLVVQSGFASNDFVSSSLIFMYSKCGVLGDARKSFEEADKSSSV 466
Query: 400 VWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKS 459
W++M+ GYA HG +LF +M +E + D V + ++++A SH G+VD+G +
Sbjct: 467 PWNSMMFGYAQHGQAQTVTDLFNEMLDLE-VPLDHVTFVALITAYSHGGLVDEGSEILNT 525
Query: 460 MQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVE 519
M++ + I +EHY C VDL GRAG+ D A + I MP + A VW LL AC H N+E
Sbjct: 526 METRYKIPMRMEHYACGVDLYGRAGQLDKAKELIESMPFQPDAIVWMTLLGACRIHGNME 585
Query: 520 LGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEID 579
L A++L P Y+L++++++ GMW + AT + +M +R L+K PGWS +E+
Sbjct: 586 LASDVARHLFVAEPRQHSTYVLLSSMYSGLGMWSDRATVQKVMRNRALSKIPGWSWIEVK 645
Query: 580 GSVQVFVAGDRSHHLSVDIRKTLKEL 605
V F A DRSH V+I L+ L
Sbjct: 646 NEVHSFNADDRSHPRMVEIFDMLRML 671
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 111/386 (28%), Positives = 193/386 (50%), Gaps = 18/386 (4%)
Query: 71 LIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLE 130
L+ YS + ++R+V DE+P SWNS+++AH A + +A +L+ M G
Sbjct: 32 LLTAYS-ATGLAAARRVFDEIP--HPDAASWNSLLAAHVAAGAHRDAWRLLRAMHARG-- 86
Query: 131 LSASTFV------SVVSGCSFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEA 184
L+ASTF S + G + + GL +N P A++++ +YAK G++ +A
Sbjct: 87 LAASTFALGSALRSAAAARRPELGAQLQSFSVRCGLADNVFP-ASALLDVYAKCGRLGDA 145
Query: 185 RSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQV 244
R +FD + +IVSW II GY + EA L +M+R+ PD F L+ A
Sbjct: 146 RRVFDGMPVRNIVSWNAIIAGYTDSRKPAEAMELFLEMQRVGSVPDGTTFAVLLATIAGP 205
Query: 245 GNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMI 304
L +H ++K G N ++ Y++C L +R++FD + + + W SM+
Sbjct: 206 RWYSLMRQLHGKIVKYGSALGLVALNAAITAYSQCDALADSRKIFDGIESRDLISWNSML 265
Query: 305 GGYAQLGYPSEAVNLFKRLLKTS-VRPNEATLATTLSACAELG-SLSKGKEIEEYIVLNG 362
G YA G EA+ F R+++ S ++P+ + + +S C+E G +G+ I ++ G
Sbjct: 266 GAYAYHGLDDEAMRFFVRMMRESGIQPDMYSFTSAISVCSEHGCDDQQGRSIHSLVIKFG 325
Query: 363 LESNRQVQTSLIHMFSKCGR---INKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALN 419
LE V ++I M+++ + A F + KD W++M+ GY+ HG+ AL
Sbjct: 326 LEGVTPVCNAMIAMYTRFADNCMMEDAYNCFSSLVFKDAVSWNSMLTGYSHHGLSSDALK 385
Query: 420 LFYKMQHVEGLKPDAVVYTSILSACS 445
F++ E ++ D ++ L +CS
Sbjct: 386 -FFRCMRAENIRTDEFGLSAALRSCS 410
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 80/299 (26%), Positives = 141/299 (47%), Gaps = 1/299 (0%)
Query: 169 NSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVT 228
N +++ Y+ G + AR +FDEI SW +++ +V G +A+ L M +
Sbjct: 30 NQLLTAYSATG-LAAARRVFDEIPHPDAASWNSLLAAHVAAGAHRDAWRLLRAMHARGLA 88
Query: 229 PDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRV 288
+ + A L + S ++ G + + L+ +Y KCG L ARRV
Sbjct: 89 ASTFALGSALRSAAAARRPELGAQLQSFSVRCGLADNVFPASALLDVYAKCGRLGDARRV 148
Query: 289 FDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSL 348
FD + +++ W ++I GY P+EA+ LF + + P+ T A L+ A
Sbjct: 149 FDGMPVRNIVSWNAIIAGYTDSRKPAEAMELFLEMQRVGSVPDGTTFAVLLATIAGPRWY 208
Query: 349 SKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGY 408
S +++ IV G + I +S+C + ++++F+ + +DL W++M+ Y
Sbjct: 209 SLMRQLHGKIVKYGSALGLVALNAAITAYSQCDALADSRKIFDGIESRDLISWNSMLGAY 268
Query: 409 AIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIE 467
A HG+ D+A+ F +M G++PD +TS +S CS G D S+ FG+E
Sbjct: 269 AYHGLDDEAMRFFVRMMRESGIQPDMYSFTSAISVCSEHGCDDQQGRSIHSLVIKFGLE 327
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 103/220 (46%), Gaps = 7/220 (3%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
M+ +++G + L + M + + F L++C+++ + G++VHS V++ G
Sbjct: 370 MLTGYSHHGLSSDALKFFRCMRAENIRTDEFGLSAALRSCSDLAVLRLGRQVHSLVVQSG 429
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F + FV + LI MYSKC +RK +E S V WNS++ +++ +
Sbjct: 430 FASNDFVSSSLIFMYSKCGVLGDARKSFEE--ADKSSSVPWNSMMFGYAQHGQAQTVTDL 487
Query: 121 LKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGLLNNEIPLA----NSVMSMYA 176
EM L + L TFV++++ S + + +IP+ + +Y
Sbjct: 488 FNEMLDLEVPLDHVTFVALITAYSHGGLVDEGSEILNTMETRYKIPMRMEHYACGVDLYG 547
Query: 177 KFGKVNEARSIFDEIG-ETSIVSWTTIIGGYVNVGNVNEA 215
+ G++++A+ + + + + + W T++G GN+ A
Sbjct: 548 RAGQLDKAKELIESMPFQPDAIVWMTLLGACRIHGNMELA 587
>gi|359492337|ref|XP_002284789.2| PREDICTED: pentatricopeptide repeat-containing protein At5g40410,
mitochondrial-like [Vitis vinifera]
Length = 694
Score = 328 bits (842), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 187/560 (33%), Positives = 313/560 (55%), Gaps = 44/560 (7%)
Query: 96 RSVVSWNSIIS--------AHSRA----------------------CLNDEA---ILVLK 122
R V WNSI+S +H+R+ C+ EA I+V
Sbjct: 61 RLAVPWNSIVSPVRCGTSISHNRSFAFRHTDLIPKQFKRFNTNKGCCIFREASQFIVVYS 120
Query: 123 EMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVN 182
+ L +S+ T VS S R S++ Y G + + + +SMY K G
Sbjct: 121 IVQSLVFAISSCTSVSYCSAIHARVIKSLN---YSDGFIGDRL------VSMYFKLGYDE 171
Query: 183 EARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMS-VTPDLVVFLNLILGC 241
+A+ +FDE+ +VSW +++ G G + +MR S P+ V L+++ C
Sbjct: 172 DAQRLFDEMPNKDLVSWNSLMSGLSGRGYLGACLNAFCRMRTESGRQPNEVTLLSVVSAC 231
Query: 242 AQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWT 301
A +G L S+H +++K G + + + N L++MY K G L+ A ++F+ + +S+ W
Sbjct: 232 ADMGALDEGKSLHGVVVKLGMSGKAKVVNSLINMYGKLGFLDAASQLFEEMPVRSLVSWN 291
Query: 302 SMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLN 361
SM+ + GY + ++LF + + + P++AT+ L AC + G + + I YI
Sbjct: 292 SMVVIHNHNGYAEKGMDLFNLMKRAGINPDQATMVALLRACTDTGLGRQAESIHAYIHRC 351
Query: 362 GLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLF 421
G ++ + T+L+++++K GR+N ++++FE + D+D W+AM+ GYA+H G +A+ LF
Sbjct: 352 GFNADIIIATALLNLYAKLGRLNASEDIFEEIKDRDRIAWTAMLAGYAVHACGREAIKLF 411
Query: 422 YKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLG 481
M EG++ D V +T +LSACSHSG+V++G +F+ M + +EP ++HY C+VDLLG
Sbjct: 412 DLMVK-EGVEVDHVTFTHLLSACSHSGLVEEGKKYFEIMSEVYRVEPRLDHYSCMVDLLG 470
Query: 482 RAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYIL 541
R+GR + A + I MP+E + VW LL AC + NVELG+ A+ LL+L+P NYI+
Sbjct: 471 RSGRLEDAYELIKSMPMEPSSGVWGALLGACRVYGNVELGKEVAEQLLSLDPSDHRNYIM 530
Query: 542 MANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKT 601
++N++++AG+W++A+ R LM +RRLT+ PG S +E + FV GD+ H S +I
Sbjct: 531 LSNIYSAAGLWRDASKVRALMKERRLTRNPGCSFIEHGNKIHRFVVGDQLHPRSDEIHTK 590
Query: 602 LKELHIKLLEAGYIAEADIV 621
L+EL K+ EAG + + V
Sbjct: 591 LEELIRKIREAGCAPKTEFV 610
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 103/372 (27%), Positives = 190/372 (51%), Gaps = 18/372 (4%)
Query: 52 VHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHS-- 109
+H+ V+K D F+ L+ MY K ++++ DEMP + +VSWNS++S S
Sbjct: 141 IHARVIKSLNYSDGFIGDRLVSMYFKLGYDEDAQRLFDEMPN--KDLVSWNSLMSGLSGR 198
Query: 110 ---RACLNDEAILVLKEMWVLGLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLN 162
ACLN + + G + + T +SVVS C + +G S+H V KLG ++
Sbjct: 199 GYLGACLNAFCRMRTES----GRQPNEVTLLSVVSACADMGALDEGKSLHGVVVKLG-MS 253
Query: 163 NEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQM 222
+ + NS+++MY K G ++ A +F+E+ S+VSW +++ + + G + L N M
Sbjct: 254 GKAKVVNSLINMYGKLGFLDAASQLFEEMPVRSLVSWNSMVVIHNHNGYAEKGMDLFNLM 313
Query: 223 RRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDL 282
+R + PD + L+ C G A S+H+ + + G+N + + L+++Y K G L
Sbjct: 314 KRAGINPDQATMVALLRACTDTGLGRQAESIHAYIHRCGFNADIIIATALLNLYAKLGRL 373
Query: 283 ELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSAC 342
+ +F+ + ++ WT+M+ GYA EA+ LF ++K V + T LSAC
Sbjct: 374 NASEDIFEEIKDRDRIAWTAMLAGYAVHACGREAIKLFDLMVKEGVEVDHVTFTHLLSAC 433
Query: 343 AELGSLSKGKEIEEYIV-LNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVP-DKDLAV 400
+ G + +GK+ E + + +E + ++ + + GR+ A E+ + +P + V
Sbjct: 434 SHSGLVEEGKKYFEIMSEVYRVEPRLDHYSCMVDLLGRSGRLEDAYELIKSMPMEPSSGV 493
Query: 401 WSAMINGYAIHG 412
W A++ ++G
Sbjct: 494 WGALLGACRVYG 505
Score = 125 bits (315), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 86/309 (27%), Positives = 160/309 (51%), Gaps = 12/309 (3%)
Query: 6 TNNGSFEETLSTYSSM-LQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQD 64
+ G L+ + M ++G N T V+ ACA++ ++ +GK +H V+K+G
Sbjct: 196 SGRGYLGACLNAFCRMRTESGRQPNEVTLLSVVSACADMGALDEGKSLHGVVVKLGMSGK 255
Query: 65 AFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEM 124
A V LI+MY K ++ ++ +EMPV RS+VSWNS++ H+ ++ + + M
Sbjct: 256 AKVVNSLINMYGKLGFLDAASQLFEEMPV--RSLVSWNSMVVIHNHNGYAEKGMDLFNLM 313
Query: 125 WVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGK 180
G+ +T V+++ C+ RQ S+H +++ G N +I +A +++++YAK G+
Sbjct: 314 KRAGINPDQATMVALLRACTDTGLGRQAESIHAYIHRCG-FNADIIIATALLNLYAKLGR 372
Query: 181 VNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILG 240
+N + IF+EI + ++WT ++ GY EA L + M + V D V F +L+
Sbjct: 373 LNASEDIFEEIKDRDRIAWTAMLAGYAVHACGREAIKLFDLMVKEGVEVDHVTFTHLLSA 432
Query: 241 CAQVGNLFLALSMHSLLLKSGYNNEDPLDNL--LVSMYTKCGDLELARRVFDAV-LEKSV 297
C+ G L + ++ Y E LD+ +V + + G LE A + ++ +E S
Sbjct: 433 CSHSG-LVEEGKKYFEIMSEVYRVEPRLDHYSCMVDLLGRSGRLEDAYELIKSMPMEPSS 491
Query: 298 FLWTSMIGG 306
+W +++G
Sbjct: 492 GVWGALLGA 500
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/234 (20%), Positives = 110/234 (47%), Gaps = 9/234 (3%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
M+ +NG E+ + ++ M + G++ + T +L+AC + + +H+++ + G
Sbjct: 293 MVVIHNHNGYAEKGMDLFNLMKRAGINPDQATMVALLRACTDTGLGRQAESIHAYIHRCG 352
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F D + T L+++Y+K +S + +E+ R R ++W ++++ ++ EAI +
Sbjct: 353 FNADIIIATALLNLYAKLGRLNASEDIFEEIKDRDR--IAWTAMLAGYAVHACGREAIKL 410
Query: 121 LKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
M G+E+ TF ++S CS +G + ++ + + + ++ +
Sbjct: 411 FDLMVKEGVEVDHVTFTHLLSACSHSGLVEEGKKYFEIMSEVYRVEPRLDHYSCMVDLLG 470
Query: 177 KFGKVNEARSIFDEIG-ETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTP 229
+ G++ +A + + E S W ++G GNV + Q+ +S+ P
Sbjct: 471 RSGRLEDAYELIKSMPMEPSSGVWGALLGACRVYGNVELGKEVAEQL--LSLDP 522
>gi|449493401|ref|XP_004159278.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g25970-like [Cucumis
sativus]
Length = 704
Score = 328 bits (842), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 184/601 (30%), Positives = 317/601 (52%), Gaps = 15/601 (2%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI N G+ E + M G + +TF +LK A G++VHS ++K+G
Sbjct: 70 MIAGHINCGNLEASWDVLRCMRSCGFELDRYTFGSMLKGIAFAGMFHLGQQVHSIIIKMG 129
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+ ++ + + L+DMY+KC + L + + + VSWN++I+ +++A + A +
Sbjct: 130 YAENVYAGSALLDMYAKCEKLEDA--YLSFLSISKHNTVSWNAMINGYAQAGDRETAFWL 187
Query: 121 LKEMWVLGLELSASTFVSVV------SGCSFRQGISMHCCVYKLGLLNNEIPLANSVMSM 174
L M G ++ T+ ++ C+ + + L L+N + N++++
Sbjct: 188 LDCMEQEGEKVDDGTYAPLLPLLDDADFCNLTSQLHGKIIKHGLELVNT---MCNALITS 244
Query: 175 YAKFGKVNEARSIFDE-IGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVV 233
Y+K G +++A+ IFD G +V+W +++ Y+ + AF L M+ PDL
Sbjct: 245 YSKCGSLDDAKRIFDSSAGIRDLVTWNSLLAAYLLRSQEDLAFKLLIDMQEHGFEPDLYS 304
Query: 234 FLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKC--GDLELARRVFDA 291
+ ++I C S+H L++K G+ P+ N L+SMY K G ++ A +F++
Sbjct: 305 YTSIISACFNENISNNGRSLHGLVIKRGFEQSVPISNALISMYLKSDYGSMKEALCIFES 364
Query: 292 VLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKG 351
+ K W S++ G +Q G +AV F + ++ + + + L +C++L + G
Sbjct: 365 LEFKDRVSWNSILTGLSQTGSSEDAVKSFLHMRSAAMDIDHYSFSAVLRSCSDLATFQLG 424
Query: 352 KEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIH 411
++I + GLESN V +SLI M+SKCG I A+ FE W+A++ GYA H
Sbjct: 425 QQIHVLALKYGLESNEFVSSSLIFMYSKCGIIEDARRSFEEASKNSSITWNALMFGYAQH 484
Query: 412 GMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIE 471
G + AL+LF+ M+ + +K D + + ++L+ACSH G+V+ G F + M+S++G+ P +E
Sbjct: 485 GQCNVALDLFFLME-XKKVKMDHITFVAVLTACSHIGLVEQGCKFLRCMESDYGVPPRME 543
Query: 472 HYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTL 531
HY C VDL GR+GR + A I EMP + VW L AC N+EL A +LL +
Sbjct: 544 HYACAVDLYGRSGRLEEAKALIEEMPFKPDTTVWKTFLGACRSCGNIELACQVAGHLLEM 603
Query: 532 NPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRS 591
P Y+L++N++ + W E A + LM +R + K PGWS +E++ +V F+A D S
Sbjct: 604 EPEEHCTYVLLSNMYGNLMRWDEKAKVKRLMKERGVKKVPGWSWIEVNNNVHAFIAQDHS 663
Query: 592 H 592
H
Sbjct: 664 H 664
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 108/401 (26%), Positives = 192/401 (47%), Gaps = 13/401 (3%)
Query: 53 HSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRAC 112
HS +K+G D + +++ Y KC + S+ + DEMP +R VSWN++I+ H C
Sbjct: 21 HSLAVKLGTIADVYTCNNILNGYWKCKELRSADVLFDEMP--MRDSVSWNTMIAGHIN-C 77
Query: 113 LNDEAIL-VLKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPL 167
N EA VL+ M G EL TF S++ G + F G +H + K+G N +
Sbjct: 78 GNLEASWDVLRCMRSCGFELDRYTFGSMLKGIAFAGMFHLGQQVHSIIIKMGYAEN-VYA 136
Query: 168 ANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSV 227
++++ MYAK K+ +A F I + + VSW +I GY G+ AF L + M +
Sbjct: 137 GSALLDMYAKCEKLEDAYLSFLSISKHNTVSWNAMINGYAQAGDRETAFWLLDCMEQEGE 196
Query: 228 TPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARR 287
D + L+ L +H ++K G + + N L++ Y+KCG L+ A+R
Sbjct: 197 KVDDGTYAPLLPLLDDADFCNLTSQLHGKIIKHGLELVNTMCNALITSYSKCGSLDDAKR 256
Query: 288 VFDAVLE-KSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELG 346
+FD+ + + W S++ Y A L + + P+ + + +SAC
Sbjct: 257 IFDSSAGIRDLVTWNSLLAAYLLRSQEDLAFKLLIDMQEHGFEPDLYSYTSIISACFNEN 316
Query: 347 SLSKGKEIEEYIVLNGLESNRQVQTSLIHMF--SKCGRINKAKEVFERVPDKDLAVWSAM 404
+ G+ + ++ G E + + +LI M+ S G + +A +FE + KD W+++
Sbjct: 317 ISNNGRSLHGLVIKRGFEQSVPISNALISMYLKSDYGSMKEALCIFESLEFKDRVSWNSI 376
Query: 405 INGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACS 445
+ G + G + A+ F M+ + D ++++L +CS
Sbjct: 377 LTGLSQTGSSEDAVKSFLHMRSA-AMDIDHYSFSAVLRSCS 416
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 93/319 (29%), Positives = 157/319 (49%), Gaps = 6/319 (1%)
Query: 142 GCSFRQGISM---HCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVS 198
G SFR ++ H KLG + ++ N++++ Y K ++ A +FDE+ VS
Sbjct: 8 GTSFRALANLLLNHSLAVKLGTIA-DVYTCNNILNGYWKCKELRSADVLFDEMPMRDSVS 66
Query: 199 WTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLL 258
W T+I G++N GN+ ++ + MR D F +++ G A G L +HS+++
Sbjct: 67 WNTMIAGHINCGNLEASWDVLRCMRSCGFELDRYTFGSMLKGIAFAGMFHLGQQVHSIII 126
Query: 259 KSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVN 318
K GY + L+ MY KC LE A F ++ + + W +MI GYAQ G A
Sbjct: 127 KMGYAENVYAGSALLDMYAKCEKLEDAYLSFLSISKHNTVSWNAMINGYAQAGDRETAFW 186
Query: 319 LFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFS 378
L + + + ++ T A L + + ++ I+ +GLE + +LI +S
Sbjct: 187 LLDCMEQEGEKVDDGTYAPLLPLLDDADFCNLTSQLHGKIIKHGLELVNTMCNALITSYS 246
Query: 379 KCGRINKAKEVFERVPD-KDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVY 437
KCG ++ AK +F+ +DL W++++ Y + D A L MQ G +PD Y
Sbjct: 247 KCGSLDDAKRIFDSSAGIRDLVTWNSLLAAYLLRSQEDLAFKLLIDMQE-HGFEPDLYSY 305
Query: 438 TSILSACSHSGMVDDGLSF 456
TSI+SAC + + ++G S
Sbjct: 306 TSIISACFNENISNNGRSL 324
>gi|449480927|ref|XP_004156032.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g49710-like [Cucumis sativus]
Length = 720
Score = 328 bits (842), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 192/623 (30%), Positives = 328/623 (52%), Gaps = 41/623 (6%)
Query: 32 TFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLD-- 89
+F LK C + GK +H+ +K ++ + +YSKC ++R+V D
Sbjct: 10 SFRQFLKTCIAHRDLRTGKSLHALYIKSFVPTSTYLSNHFLLLYSKCRRLSAARRVFDHT 69
Query: 90 -----------------------------EMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
EMP VS+N++I+A++R A +
Sbjct: 70 HDCNVFSFNTLISAYAKESYVEVAHQLFDEMPQP--DSVSYNTLIAAYARRGDTQPAFQL 127
Query: 121 LKEMWVLGLELSASTFVSVVSGCSFRQGI--SMHCCVYKLGLLNNEIPLANSVMSMYAKF 178
EM L++ T +++ C G+ +H GL ++ + + N++++ Y+K
Sbjct: 128 FLEMREAFLDMDGFTLSGIITACGINVGLIRQLHALSVVTGL-DSYVSVGNALITSYSKN 186
Query: 179 GKVNEARSIFDEIGE-TSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNL 237
G + EAR IF + E VSW +++ Y+ ++A L +M + D+ ++
Sbjct: 187 GFLKEARRIFHWLSEDRDEVSWNSMVVAYMQHREGSKALELYLEMTVRGLIVDIFTLASV 246
Query: 238 ILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLEL-ARRVFDAVLEKS 296
+ V +L L H+ L+KSGY+ + + L+ +Y+KCG L R+VFD +
Sbjct: 247 LTAFTNVQDLLGGLQFHAKLIKSGYHQNSHVGSGLIDLYSKCGGCMLDCRKVFDEISNPD 306
Query: 297 VFLWTSMIGGYAQL-GYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIE 355
+ LW +MI GY+ EA+ F++L RP++ +L +SAC+ + S S+G+++
Sbjct: 307 LVLWNTMISGYSLYEDLSDEALECFRQLQGVGHRPDDCSLVCVISACSNMSSPSQGRQVH 366
Query: 356 EYIVLNGLESNR-QVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMG 414
+ + SNR V +LI M+SKCG + AK +F+ +P+ + +++MI GYA HGMG
Sbjct: 367 GLALKLDIPSNRISVNNALIAMYSKCGNLRDAKTLFDTMPEHNTVSYNSMIAGYAQHGMG 426
Query: 415 DQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYL 474
Q+L+LF +M ++ P + + S+L+AC+H+G V+DG +F M+ FGIEP H+
Sbjct: 427 FQSLHLFQRMLEMD-FTPTNITFISVLAACAHTGRVEDGKIYFNMMKQKFGIEPEAGHFS 485
Query: 475 CLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPG 534
C++DLLGRAG+ A + I +P + W+ LL AC H NVEL AA LL L+P
Sbjct: 486 CMIDLLGRAGKLSEAERLIETIPFDPGFFXWSALLGACRIHGNVELAIKAANRLLQLDPL 545
Query: 535 STGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHL 594
+ Y+++AN+++ G ++AA+ R LM DR + K+PG S +E++ + +FVA D H +
Sbjct: 546 NAAPYVMLANIYSDNGRLQDAASVRKLMRDRGVKKKPGCSWIEVNRRIHIFVAEDTFHPM 605
Query: 595 SVDIRKTLKELHIKLLEAGYIAE 617
I++ L+E+ K+ + GY E
Sbjct: 606 IKKIQEYLEEMMRKIKKVGYTPE 628
Score = 138 bits (348), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 91/321 (28%), Positives = 165/321 (51%), Gaps = 10/321 (3%)
Query: 13 ETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLI 72
+ L Y M G+ + FT VL A N+ + G + H+ ++K G+ Q++ V +GLI
Sbjct: 223 KALELYLEMTVRGLIVDIFTLASVLTAFTNVQDLLGGLQFHAKLIKSGYHQNSHVGSGLI 282
Query: 73 DMYSKCSD-FVSSRKVLDEMPVRLRSVVSWNSIISAHS-RACLNDEAILVLKEMWVLGLE 130
D+YSKC + RKV DE + +V WN++IS +S L+DEA+ +++ +G
Sbjct: 283 DLYSKCGGCMLDCRKVFDE--ISNPDLVLWNTMISGYSLYEDLSDEALECFRQLQGVGHR 340
Query: 131 LSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARS 186
+ V V+S C S QG +H KL + +N I + N++++MY+K G + +A++
Sbjct: 341 PDDCSLVCVISACSNMSSPSQGRQVHGLALKLDIPSNRISVNNALIAMYSKCGNLRDAKT 400
Query: 187 IFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGN 246
+FD + E + VS+ ++I GY G ++ L +M M TP + F++++ CA G
Sbjct: 401 LFDTMPEHNTVSYNSMIAGYAQHGMGFQSLHLFQRMLEMDFTPTNITFISVLAACAHTGR 460
Query: 247 LFLA-LSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAV-LEKSVFLWTSMI 304
+ + + + K G E + ++ + + G L A R+ + + + F W++++
Sbjct: 461 VEDGKIYFNMMKQKFGIEPEAGHFSCMIDLLGRAGKLSEAERLIETIPFDPGFFXWSALL 520
Query: 305 GGYAQLGYPSEAVNLFKRLLK 325
G G A+ RLL+
Sbjct: 521 GACRIHGNVELAIKAANRLLQ 541
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 82/375 (21%), Positives = 156/375 (41%), Gaps = 38/375 (10%)
Query: 12 EETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAF-VQTG 70
+E L + + G + + V+ AC+N++S G++VH LK+ + V
Sbjct: 325 DEALECFRQLQGVGHRPDDCSLVCVISACSNMSSPSQGRQVHGLALKLDIPSNRISVNNA 384
Query: 71 LIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLE 130
LI MYSKC + ++ + D MP + VS+NS+I+ +++ + +++ + + M +
Sbjct: 385 LIAMYSKCGNLRDAKTLFDTMPE--HNTVSYNSMIAGYAQHGMGFQSLHLFQRMLEMDFT 442
Query: 131 LSASTFVSVVSGCSFR-----QGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEAR 185
+ TF+SV++ C+ I + K G + E + ++ + + GK++EA
Sbjct: 443 PTNITFISVLAACAHTGRVEDGKIYFNMMKQKFG-IEPEAGHFSCMIDLLGRAGKLSEAE 501
Query: 186 SIFDEIG-ETSIVSWTTIIGGYVNVGNVNEAFGLCN---QMRRMSVTPDLVVFLNLILGC 241
+ + I + W+ ++G GNV A N Q+ ++ P V+ N+
Sbjct: 502 RLIETIPFDPGFFXWSALLGACRIHGNVELAIKAANRLLQLDPLNAAP-YVMLANIY--- 557
Query: 242 AQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWT 301
+ G L A S+ L+ G V C +E+ RR+ V E +
Sbjct: 558 SDNGRLQDAASVRKLMRDRG-----------VKKKPGCSWIEVNRRIHIFVAEDTFHPMI 606
Query: 302 SMIGGYAQLGYPSEAVNLFKRLLKTSVRP--NEATLATTLSACAELGSLSKGKEIEEYIV 359
I Y + + +++ K P A++ L G E+ V
Sbjct: 607 KKIQEYLE--------EMMRKIKKVGYTPEVRSASVGGDDRVWQREEELRLGHHSEKLAV 658
Query: 360 LNGLESNRQVQTSLI 374
GL S R+ + L+
Sbjct: 659 SFGLMSTREGEPILV 673
>gi|357449183|ref|XP_003594868.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355483916|gb|AES65119.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 874
Score = 328 bits (842), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 208/652 (31%), Positives = 341/652 (52%), Gaps = 49/652 (7%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACAN-INSIWDGKRVHSHVLKV 59
MI + +E + + ML V SFT V AC+N IN + GK+VH+ VL+
Sbjct: 157 MINAACRFEEWELAVHLFRLMLLENVGPTSFTLVSVAHACSNLINGLLLGKQVHAFVLRN 216
Query: 60 GFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAIL 119
G F L+ MY+K ++ + D + +VSWN+IIS+ S+ +EA+L
Sbjct: 217 G-DWRTFTNNALVTMYAKLGRVYEAKTLFDVFDDK--DLVSWNTIISSLSQNDRFEEALL 273
Query: 120 VLKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGLLNNEIPLANS-----VMSM 174
L M G+ + T SV+ CS + + ++ L+NN++ + NS ++ M
Sbjct: 274 YLHVMLQSGVRPNGVTLASVLPACSHLEMLGCGKEIHAFVLMNNDL-IENSFVGCALVDM 332
Query: 175 YAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMR-RMSVTPDLVV 233
Y + + R +FD + +I W +I GYV EA L +M + ++P+ V
Sbjct: 333 YCNCKQPEKGRLVFDGMFRRTIAVWNAMIAGYVRNEFDYEAIELFVEMVFELGLSPNSVT 392
Query: 234 FLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVL 293
+++ C + + +HS ++K G+ + + N L+ MY++ G +E+AR +F ++
Sbjct: 393 LSSVLPACVRCESFLDKEGIHSCVVKWGFEKDKYVQNALMDMYSRMGRIEIARSIFGSMN 452
Query: 294 EKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTS------------------VRPNEATL 335
K + W +MI GY G +A+NL + + ++PN TL
Sbjct: 453 RKDIVSWNTMITGYVVCGRHDDALNLLHDMQRGQAEHRINTFDDYEDNKNFPLKPNSVTL 512
Query: 336 ATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPD 395
T L CA L +L KGKEI Y V L + V ++L+ M++KCG +N ++ VFE++
Sbjct: 513 MTVLPGCAALAALGKGKEIHAYAVKQMLSKDVAVGSALVDMYAKCGCLNLSRTVFEQMSV 572
Query: 396 KDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEG-----LKPDAVVYTSILSACSHSGMV 450
+++ W+ +I Y +HG G++AL LF +M EG ++P+ V Y +I ++ SHSGMV
Sbjct: 573 RNVITWNVLIMAYGMHGKGEEALKLFRRMVE-EGDNNREIRPNEVTYIAIFASLSHSGMV 631
Query: 451 DDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEV-QAQVWAPLL 509
D+GL+ F +M++ GIEP+ +HY CLVDLLGR+G+ + A I MP + + W+ LL
Sbjct: 632 DEGLNLFYTMKAKHGIEPTSDHYACLVDLLGRSGQIEEAYNLIKTMPSNMKKVDAWSSLL 691
Query: 510 SACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTK 569
AC H N+E+GE AAKNL L+P N+ K++ R M ++ + K
Sbjct: 692 GACKIHQNLEIGEIAAKNLFVLDP----------NVLDYGT--KQSMLGRK-MKEKGVRK 738
Query: 570 EPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKELHIKLLEAGYIAEADIV 621
EPG S +E V F+AGD SH S ++ + L+ L +++ + GY+ + V
Sbjct: 739 EPGCSWIEHGDEVHKFLAGDVSHPQSKEVHEYLETLSLRMKKEGYVPDTSCV 790
Score = 240 bits (612), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 158/525 (30%), Positives = 259/525 (49%), Gaps = 34/525 (6%)
Query: 2 IRNSTNNGS-FEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+R+ T + S F + +STY++M+ GV ++F FP VLKA A I + GK++H+HV K G
Sbjct: 56 LRSQTQSSSTFHQAISTYTNMVTAGVPPDNFAFPAVLKATAGIQDLNLGKQLHAHVFKFG 115
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
V L++MY KC D ++R+V DE + R VSWNS+I+A R + A+ +
Sbjct: 116 QALPTAVPNSLVNMYGKCGDIDAARRVFDE--ITNRDDVSWNSMINAACRFEEWELAVHL 173
Query: 121 LKEMWVLGLELSASTFVSVVSGCS-FRQGISMHCCVYKLGLLNNE--IPLANSVMSMYAK 177
+ M + + ++ T VSV CS G+ + V+ L N + N++++MYAK
Sbjct: 174 FRLMLLENVGPTSFTLVSVAHACSNLINGLLLGKQVHAFVLRNGDWRTFTNNALVTMYAK 233
Query: 178 FGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNL 237
G+V EA+++FD + +VSW TII EA + M + V P+ V ++
Sbjct: 234 LGRVYEAKTLFDVFDDKDLVSWNTIISSLSQNDRFEEALLYLHVMLQSGVRPNGVTLASV 293
Query: 238 ILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDN-----LLVSMYTKCGDLELARRVFDAV 292
+ C+ + L +H+ +L N D ++N LV MY C E R VFD +
Sbjct: 294 LPACSHLEMLGCGKEIHAFVLM----NNDLIENSFVGCALVDMYCNCKQPEKGRLVFDGM 349
Query: 293 LEKSVFLWTSMIGGYAQLGYPSEAVNLF-KRLLKTSVRPNEATLATTLSACAELGSLSKG 351
+++ +W +MI GY + + EA+ LF + + + + PN TL++ L AC S
Sbjct: 350 FRRTIAVWNAMIAGYVRNEFDYEAIELFVEMVFELGLSPNSVTLSSVLPACVRCESFLDK 409
Query: 352 KEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIH 411
+ I +V G E ++ VQ +L+ M+S+ GRI A+ +F + KD+ W+ MI GY +
Sbjct: 410 EGIHSCVVKWGFEKDKYVQNALMDMYSRMGRIEIARSIFGSMNRKDIVSWNTMITGYVVC 469
Query: 412 GMGDQALNLFYKMQHVEG-----------------LKPDAVVYTSILSACSHSGMVDDGL 454
G D ALNL + MQ + LKP++V ++L C+ + G
Sbjct: 470 GRHDDALNLLHDMQRGQAEHRINTFDDYEDNKNFPLKPNSVTLMTVLPGCAALAALGKGK 529
Query: 455 SFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVE 499
+ + LVD+ + G +L+ +M V
Sbjct: 530 EIHAYAVKQM-LSKDVAVGSALVDMYAKCGCLNLSRTVFEQMSVR 573
>gi|449442142|ref|XP_004138841.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g25970-like [Cucumis sativus]
Length = 704
Score = 328 bits (841), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 184/601 (30%), Positives = 317/601 (52%), Gaps = 15/601 (2%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI N G+ E + M G + +TF +LK A G++VHS ++K+G
Sbjct: 70 MIAGHINCGNLEASWDVLRCMRSCGFELDRYTFGSMLKGIAFAGMFHLGQQVHSIIIKMG 129
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+ ++ + + L+DMY+KC + L + + + VSWN++I+ +++A + A +
Sbjct: 130 YAENVYAGSALLDMYAKCEKLEDA--YLSFLSISKHNTVSWNAMINGYAQAGDRETAFWL 187
Query: 121 LKEMWVLGLELSASTFVSVV------SGCSFRQGISMHCCVYKLGLLNNEIPLANSVMSM 174
L M G ++ T+ ++ C+ + + L L+N + N++++
Sbjct: 188 LDCMEQEGEKVDDGTYAPLLPLLDDADFCNLTSQLHGKIIKHGLELVNT---MCNALITS 244
Query: 175 YAKFGKVNEARSIFDE-IGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVV 233
Y+K G +++A+ IFD G +V+W +++ Y+ + AF L M+ PDL
Sbjct: 245 YSKCGSLDDAKRIFDSSAGIRDLVTWNSLLAAYLLRSQEDLAFKLLIDMQEHGFEPDLYS 304
Query: 234 FLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKC--GDLELARRVFDA 291
+ ++I C S+H L++K G+ P+ N L+SMY K G ++ A +F++
Sbjct: 305 YTSIISACFNENISNNGRSLHGLVIKRGFEQSVPISNALISMYLKSDYGSMKEALCIFES 364
Query: 292 VLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKG 351
+ K W S++ G +Q G +AV F + ++ + + + L +C++L + G
Sbjct: 365 LEFKDRVSWNSILTGLSQTGSSEDAVKSFLHMRSAAMDIDHYSFSAVLRSCSDLATFQLG 424
Query: 352 KEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIH 411
++I + GLESN V +SLI M+SKCG I A+ FE W+A++ GYA H
Sbjct: 425 QQIHVLALKYGLESNEFVSSSLIFMYSKCGIIEDARRSFEEASKNSSITWNALMFGYAQH 484
Query: 412 GMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIE 471
G + AL+LF+ M+ + +K D + + ++L+ACSH G+V+ G F + M+S++G+ P +E
Sbjct: 485 GQCNVALDLFFLMEE-KKVKMDHITFVAVLTACSHIGLVEQGCKFLRCMESDYGVPPRME 543
Query: 472 HYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTL 531
HY C VDL GR+GR + A I EMP + VW L AC N+EL A +LL +
Sbjct: 544 HYACAVDLYGRSGRLEEAKALIEEMPFKPDTTVWKTFLGACRSCGNIELACQVAGHLLEM 603
Query: 532 NPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRS 591
P Y+L++N++ + W E A + LM +R + K PGWS +E++ +V F+A D S
Sbjct: 604 EPEEHCTYVLLSNMYGNLMRWDEKAKVKRLMKERGVKKVPGWSWIEVNNNVHAFIAQDHS 663
Query: 592 H 592
H
Sbjct: 664 H 664
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 108/401 (26%), Positives = 192/401 (47%), Gaps = 13/401 (3%)
Query: 53 HSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRAC 112
HS +K+G D + +++ Y KC + S+ + DEMP +R VSWN++I+ H C
Sbjct: 21 HSLAVKLGTIADVYTCNNILNGYWKCKELRSADVLFDEMP--MRDSVSWNTMIAGHIN-C 77
Query: 113 LNDEAIL-VLKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPL 167
N EA VL+ M G EL TF S++ G + F G +H + K+G N +
Sbjct: 78 GNLEASWDVLRCMRSCGFELDRYTFGSMLKGIAFAGMFHLGQQVHSIIIKMGYAEN-VYA 136
Query: 168 ANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSV 227
++++ MYAK K+ +A F I + + VSW +I GY G+ AF L + M +
Sbjct: 137 GSALLDMYAKCEKLEDAYLSFLSISKHNTVSWNAMINGYAQAGDRETAFWLLDCMEQEGE 196
Query: 228 TPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARR 287
D + L+ L +H ++K G + + N L++ Y+KCG L+ A+R
Sbjct: 197 KVDDGTYAPLLPLLDDADFCNLTSQLHGKIIKHGLELVNTMCNALITSYSKCGSLDDAKR 256
Query: 288 VFDAVLE-KSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELG 346
+FD+ + + W S++ Y A L + + P+ + + +SAC
Sbjct: 257 IFDSSAGIRDLVTWNSLLAAYLLRSQEDLAFKLLIDMQEHGFEPDLYSYTSIISACFNEN 316
Query: 347 SLSKGKEIEEYIVLNGLESNRQVQTSLIHMF--SKCGRINKAKEVFERVPDKDLAVWSAM 404
+ G+ + ++ G E + + +LI M+ S G + +A +FE + KD W+++
Sbjct: 317 ISNNGRSLHGLVIKRGFEQSVPISNALISMYLKSDYGSMKEALCIFESLEFKDRVSWNSI 376
Query: 405 INGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACS 445
+ G + G + A+ F M+ + D ++++L +CS
Sbjct: 377 LTGLSQTGSSEDAVKSFLHMRSA-AMDIDHYSFSAVLRSCS 416
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 93/319 (29%), Positives = 157/319 (49%), Gaps = 6/319 (1%)
Query: 142 GCSFRQGISM---HCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVS 198
G SFR ++ H KLG + ++ N++++ Y K ++ A +FDE+ VS
Sbjct: 8 GTSFRALANLLLNHSLAVKLGTIA-DVYTCNNILNGYWKCKELRSADVLFDEMPMRDSVS 66
Query: 199 WTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLL 258
W T+I G++N GN+ ++ + MR D F +++ G A G L +HS+++
Sbjct: 67 WNTMIAGHINCGNLEASWDVLRCMRSCGFELDRYTFGSMLKGIAFAGMFHLGQQVHSIII 126
Query: 259 KSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVN 318
K GY + L+ MY KC LE A F ++ + + W +MI GYAQ G A
Sbjct: 127 KMGYAENVYAGSALLDMYAKCEKLEDAYLSFLSISKHNTVSWNAMINGYAQAGDRETAFW 186
Query: 319 LFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFS 378
L + + + ++ T A L + + ++ I+ +GLE + +LI +S
Sbjct: 187 LLDCMEQEGEKVDDGTYAPLLPLLDDADFCNLTSQLHGKIIKHGLELVNTMCNALITSYS 246
Query: 379 KCGRINKAKEVFERVPD-KDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVY 437
KCG ++ AK +F+ +DL W++++ Y + D A L MQ G +PD Y
Sbjct: 247 KCGSLDDAKRIFDSSAGIRDLVTWNSLLAAYLLRSQEDLAFKLLIDMQE-HGFEPDLYSY 305
Query: 438 TSILSACSHSGMVDDGLSF 456
TSI+SAC + + ++G S
Sbjct: 306 TSIISACFNENISNNGRSL 324
>gi|302784186|ref|XP_002973865.1| hypothetical protein SELMODRAFT_100621 [Selaginella moellendorffii]
gi|300158197|gb|EFJ24820.1| hypothetical protein SELMODRAFT_100621 [Selaginella moellendorffii]
Length = 616
Score = 328 bits (841), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 169/537 (31%), Positives = 305/537 (56%), Gaps = 18/537 (3%)
Query: 36 VLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRL 95
+L+ C + + GK++H HV+K G+ ++ +V L+ MYSKC ++KV D M R
Sbjct: 76 LLRDCGELAA---GKKIHEHVVKNGYYENVYVGNHLVQMYSKCGSLEDAKKVFDGM--RR 130
Query: 96 RSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCS------FRQGI 149
R +SW+ +I+ + R L EAI + K M ++ TF +V++ CS G
Sbjct: 131 RDSISWSKMIAGYVRHGLAREAIKLYKAM---AIDPDGFTFSAVLNACSSLGPRALEVGK 187
Query: 150 SMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNV 209
+H + ++ L ++ + +++++M+AK G + E+R +FD+ ++ W ++I Y
Sbjct: 188 EIHAHMKRI-WLKPDVFVDSALVTMFAKCGSLKESREVFDDCRWKDVLFWNSMIVAYSQS 246
Query: 210 GNVNEAFGLCNQMRRMS--VTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDP 267
G+ EA L M S V P+ + + ++ C+ V +L +H ++ +G+ +
Sbjct: 247 GHPREAIELFKSMGSSSPPVEPNAITYTTVLAACSAVEDLEQGKEVHRQMVDAGFQFDAA 306
Query: 268 LDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTS 327
+N LV+MY KCG + AR VFD + +++V WT +I Y + G+P EA++L++++
Sbjct: 307 AENSLVNMYAKCGSITEAREVFDGMKQRTVVSWTGIISAYVRKGHPREALDLYRKMGSEG 366
Query: 328 VRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAK 387
V PN T A+ LSAC+ LG+L +GK + + G + + V +L+ ++ KCG ++ A+
Sbjct: 367 VEPNGITFASVLSACSSLGALEEGKAVHAQMKAAGYKPDLAVANALVSLYGKCGSVDSAR 426
Query: 388 EVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHS 447
+VF+R+ +++ W+AMI+ YA H ++A+ L YK +EG++ + +Y ++L+ACS +
Sbjct: 427 KVFDRMKIRNVVSWTAMISAYAHHRHSEEAIQL-YKAMDLEGVQASSFIYGTVLTACSQA 485
Query: 448 GMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAP 507
G+++ +F + + G +E Y+C+ +LGRAGR A + + MP E + W
Sbjct: 486 GLLESARHYFGCLTRDCGAPAKLEDYVCMATVLGRAGRLAEAEELLAVMPFEAEFVAWMG 545
Query: 508 LLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDD 564
LL+AC H++VE G A+ L L P + Y+L++N++ +AG +EAA R M D
Sbjct: 546 LLAACKAHNDVERGARVAEVLFRLEPLNEAPYVLLSNIYVAAGRQEEAARVRRKMGD 602
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 124/421 (29%), Positives = 221/421 (52%), Gaps = 16/421 (3%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANI--NSIWDGKRVHSHVLK 58
MI +G E + Y +M + + FTF VL AC+++ ++ GK +H+H+ +
Sbjct: 139 MIAGYVRHGLAREAIKLYKAM---AIDPDGFTFSAVLNACSSLGPRALEVGKEIHAHMKR 195
Query: 59 VGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAI 118
+ + D FV + L+ M++KC SR+V D+ R + V+ WNS+I A+S++ EAI
Sbjct: 196 IWLKPDVFVDSALVTMFAKCGSLKESREVFDD--CRWKDVLFWNSMIVAYSQSGHPREAI 253
Query: 119 LVLKEMWVLG--LELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVM 172
+ K M +E +A T+ +V++ CS QG +H + G + NS++
Sbjct: 254 ELFKSMGSSSPPVEPNAITYTTVLAACSAVEDLEQGKEVHRQMVDAG-FQFDAAAENSLV 312
Query: 173 SMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLV 232
+MYAK G + EAR +FD + + ++VSWT II YV G+ EA L +M V P+ +
Sbjct: 313 NMYAKCGSITEAREVFDGMKQRTVVSWTGIISAYVRKGHPREALDLYRKMGSEGVEPNGI 372
Query: 233 VFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAV 292
F +++ C+ +G L ++H+ + +GY + + N LVS+Y KCG ++ AR+VFD +
Sbjct: 373 TFASVLSACSSLGALEEGKAVHAQMKAAGYKPDLAVANALVSLYGKCGSVDSARKVFDRM 432
Query: 293 LEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGK 352
++V WT+MI YA + EA+ L+K + V+ + T L+AC++ G L +
Sbjct: 433 KIRNVVSWTAMISAYAHHRHSEEAIQLYKAMDLEGVQASSFIYGTVLTACSQAGLLESAR 492
Query: 353 EIEEYIVLN-GLESNRQVQTSLIHMFSKCGRINKAKEVFERVP-DKDLAVWSAMINGYAI 410
+ + G + + + + + GR+ +A+E+ +P + + W ++
Sbjct: 493 HYFGCLTRDCGAPAKLEDYVCMATVLGRAGRLAEAEELLAVMPFEAEFVAWMGLLAACKA 552
Query: 411 H 411
H
Sbjct: 553 H 553
>gi|326511827|dbj|BAJ92058.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 581
Score = 328 bits (841), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 171/457 (37%), Positives = 266/457 (58%), Gaps = 3/457 (0%)
Query: 148 GISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEI--GETSIVSWTTIIGG 205
G +H KLGL ++ L N++++MY+ + ARS+ D G + VSW TII G
Sbjct: 112 GAQLHALSVKLGLSSDTFVL-NTLINMYSSCSYPSTARSVLDSAPKGASDTVSWNTIIAG 170
Query: 206 YVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNE 265
Y++ G N+A +QM + V D V LN ++ CA+ + + H+LL+ +G+
Sbjct: 171 YIHAGLPNKALQAFSQMAKGQVMLDDVTLLNALVACARTCMMKVGKLCHALLVTNGFEIN 230
Query: 266 DPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLK 325
+ + L+SMY KCG +E ARR+FD + +++ WTSMI GY QLG EA+ LF+ +
Sbjct: 231 CYMGSSLISMYAKCGQVEDARRIFDGMPDRNAVCWTSMISGYTQLGQSKEAIKLFRDMQI 290
Query: 326 TSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINK 385
V+ ++AT++T +S+C ++G+L G+ + Y ++GL + V+ SLI M+SKCG I K
Sbjct: 291 AGVKVDDATISTVVSSCGQMGALDLGRYVHAYCDIHGLGKDISVKNSLIDMYSKCGDIKK 350
Query: 386 AKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACS 445
A ++F + +D W+ +I G+A +G+ +AL+LF +M+ G+ P+ + + +L++CS
Sbjct: 351 AYDIFCGMVKRDNFSWTVIIMGFAANGLSGEALDLFAQMEEEGGVMPNEITFLGVLTSCS 410
Query: 446 HSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVW 505
H G+V+ G F M S +GI P IEHY C+VDLLGRA A + I EMP+ A +W
Sbjct: 411 HGGLVEQGYRHFHRMSSIYGIAPRIEHYGCMVDLLGRAKLLAEAEQFIKEMPIAPDAVMW 470
Query: 506 APLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDR 565
LL AC V L EY A+ + L P G +L++ ++ + W +A R +
Sbjct: 471 RSLLFACRTCGEVGLAEYVAERIQVLEPNKCGGDVLLSTVYATTSRWVDANKVRTGIYSG 530
Query: 566 RLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTL 602
R TK+PG S +E+DG V F AGD SH + I TL
Sbjct: 531 RKTKQPGCSFIEVDGCVHEFFAGDESHFETEAIYSTL 567
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 114/418 (27%), Positives = 209/418 (50%), Gaps = 23/418 (5%)
Query: 29 NSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVL 88
++++ L A + S+ G ++H+ +K+G D FV LI+MYS CS ++R VL
Sbjct: 92 DNYSLSAALSTAARMPSVVVGAQLHALSVKLGLSSDTFVLNTLINMYSSCSYPSTARSVL 151
Query: 89 DEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCSFRQG 148
D P VSWN+II+ + A L ++A+ +M + L T ++ + C+
Sbjct: 152 DSAPKGASDTVSWNTIIAGYIHAGLPNKALQAFSQMAKGQVMLDDVTLLNALVACA---- 207
Query: 149 ISMHCCVYKLGLLNNEIPLAN----------SVMSMYAKFGKVNEARSIFDEIGETSIVS 198
C+ K+G L + + + N S++SMYAK G+V +AR IFD + + + V
Sbjct: 208 ---RTCMMKVGKLCHALLVTNGFEINCYMGSSLISMYAKCGQVEDARRIFDGMPDRNAVC 264
Query: 199 WTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLL 258
WT++I GY +G EA L M+ V D ++ C Q+G L L +H+
Sbjct: 265 WTSMISGYTQLGQSKEAIKLFRDMQIAGVKVDDATISTVVSSCGQMGALDLGRYVHAYCD 324
Query: 259 KSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVN 318
G + + N L+ MY+KCGD++ A +F ++++ F WT +I G+A G EA++
Sbjct: 325 IHGLGKDISVKNSLIDMYSKCGDIKKAYDIFCGMVKRDNFSWTVIIMGFAANGLSGEALD 384
Query: 319 LFKRLLKT-SVRPNEATLATTLSACAELGSLSKG-KEIEEYIVLNGLESNRQVQTSLIHM 376
LF ++ + V PNE T L++C+ G + +G + + G+ + ++ +
Sbjct: 385 LFAQMEEEGGVMPNEITFLGVLTSCSHGGLVEQGYRHFHRMSSIYGIAPRIEHYGCMVDL 444
Query: 377 FSKCGRINKAKEVFERVP-DKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPD 433
+ + +A++ + +P D +W +++ +A G+ L Y + ++ L+P+
Sbjct: 445 LGRAKLLAEAEQFIKEMPIAPDAVMWRSLL--FACRTCGEVGLAE-YVAERIQVLEPN 499
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 73/252 (28%), Positives = 127/252 (50%), Gaps = 12/252 (4%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+I + G + L +S M + V + T L ACA + GK H+ ++ G
Sbjct: 167 IIAGYIHAGLPNKALQAFSQMAKGQVMLDDVTLLNALVACARTCMMKVGKLCHALLVTNG 226
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F+ + ++ + LI MY+KC +R++ D MP R+ V W S+IS +++ + EAI +
Sbjct: 227 FEINCYMGSSLISMYAKCGQVEDARRIFDGMPD--RNAVCWTSMISGYTQLGQSKEAIKL 284
Query: 121 LKEMWVLGLELSASTFVSVVSGC------SFRQGISMHCCVYKLGLLNNEIPLANSVMSM 174
++M + G+++ +T +VVS C + + +C ++ LG +I + NS++ M
Sbjct: 285 FRDMQIAGVKVDDATISTVVSSCGQMGALDLGRYVHAYCDIHGLG---KDISVKNSLIDM 341
Query: 175 YAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRM-SVTPDLVV 233
Y+K G + +A IF + + SWT II G+ G EA L QM V P+ +
Sbjct: 342 YSKCGDIKKAYDIFCGMVKRDNFSWTVIIMGFAANGLSGEALDLFAQMEEEGGVMPNEIT 401
Query: 234 FLNLILGCAQVG 245
FL ++ C+ G
Sbjct: 402 FLGVLTSCSHGG 413
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/251 (23%), Positives = 105/251 (41%), Gaps = 33/251 (13%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI T G +E + + M GV + T V+ +C + ++ G+ VH++ G
Sbjct: 268 MISGYTQLGQSKEAIKLFRDMQIAGVKVDDATISTVVSSCGQMGALDLGRYVHAYCDIHG 327
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+D V+ LIDMYSKC D + + M V+ R SW II + L+ EA+ +
Sbjct: 328 LGKDISVKNSLIDMYSKCGDIKKAYDIFCGM-VK-RDNFSWTVIIMGFAANGLSGEALDL 385
Query: 121 LKEMWVLGLELSAS-TFVSVVSGCSFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFG 179
+M G + TF+ V++ CS GL+ + + S+Y
Sbjct: 386 FAQMEEEGGVMPNEITFLGVLTSCSHG------------GLVEQGYRHFHRMSSIYGIAP 433
Query: 180 KVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLIL 239
++ + D +G +++ E F ++ M + PD V++ +L+
Sbjct: 434 RIEHYGCMVDLLGRAKLLAEA-------------EQF-----IKEMPIAPDAVMWRSLLF 475
Query: 240 GCAQVGNLFLA 250
C G + LA
Sbjct: 476 ACRTCGEVGLA 486
>gi|15231970|ref|NP_187494.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207322|sp|Q9SR82.1|PP219_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g08820
gi|6403507|gb|AAF07847.1|AC010871_23 unknown protein [Arabidopsis thaliana]
gi|12322725|gb|AAG51349.1|AC012562_10 unknown protein; 90102-88045 [Arabidopsis thaliana]
gi|332641162|gb|AEE74683.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 685
Score = 328 bits (841), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 182/578 (31%), Positives = 315/578 (54%), Gaps = 12/578 (2%)
Query: 50 KRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKV--LDEMPVRLRSVVSWNSIISA 107
K++H ++ D F L+++ K + F K L + ++ +NS+I+
Sbjct: 30 KQIHVSLINHHLHHDTF----LVNLLLKRTLFFRQTKYSYLLFSHTQFPNIFLYNSLING 85
Query: 108 HSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNN 163
L E + + + GL L TF V+ C S + GI +H V K G N+
Sbjct: 86 FVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGIDLHSLVVKCGF-NH 144
Query: 164 EIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMR 223
++ S++S+Y+ G++N+A +FDEI + S+V+WT + GY G EA L +M
Sbjct: 145 DVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLFKKMV 204
Query: 224 RMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLE 283
M V PD + ++ C VG+L + + + + LV++Y KCG +E
Sbjct: 205 EMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCGKME 264
Query: 284 LARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACA 343
AR VFD+++EK + W++MI GYA +P E + LF ++L+ +++P++ ++ LS+CA
Sbjct: 265 KARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQFSIVGFLSSCA 324
Query: 344 ELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSA 403
LG+L G+ I + +N + +LI M++KCG + + EVF+ + +KD+ + +A
Sbjct: 325 SLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMKEKDIVIMNA 384
Query: 404 MINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSN 463
I+G A +G + +F + + + G+ PD + +L C H+G++ DGL FF ++
Sbjct: 385 AISGLAKNGHVKLSFAVFGQTEKL-GISPDGSTFLGLLCGCVHAGLIQDGLRFFNAISCV 443
Query: 464 FGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEY 523
+ ++ ++EHY C+VDL GRAG D A + I +MP+ A VW LLS C + +L E
Sbjct: 444 YALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALLSGCRLVKDTQLAET 503
Query: 524 AAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQ 583
K L+ L P + GNY+ ++N+++ G W EAA R +M+ + + K PG+S +E++G V
Sbjct: 504 VLKELIALEPWNAGNYVQLSNIYSVGGRWDEAAEVRDMMNKKGMKKIPGYSWIELEGKVH 563
Query: 584 VFVAGDRSHHLSVDIRKTLKELHIKLLEAGYIAEADIV 621
F+A D+SH LS I L++L ++ G++ + V
Sbjct: 564 EFLADDKSHPLSDKIYAKLEDLGNEMRLMGFVPTTEFV 601
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 134/494 (27%), Positives = 231/494 (46%), Gaps = 45/494 (9%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+I NN F ETL + S+ + G++ + FTFPLVLKAC +S G +HS V+K G
Sbjct: 82 LINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGIDLHSLVVKCG 141
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F D T L+ +YS + K+ DE+P RSVV+W ++ S ++ + + EAI +
Sbjct: 142 FNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPD--RSVVTWTALFSGYTTSGRHREAIDL 199
Query: 121 LKEMWVLGLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
K+M +G++ + V V+S C G + + ++ + N + +++++YA
Sbjct: 200 FKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSF-VRTTLVNLYA 258
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K GK+ +ARS+FD + E IV+W+T+I GY + E L QM + ++ PD +
Sbjct: 259 KCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQFSIVG 318
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
+ CA +G L L SL+ + + + N L+ MY KCG + VF + EK
Sbjct: 319 FLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMKEKD 378
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEE 356
+ + + I G A+ G+ + +F + K + P+ +T L C G + G
Sbjct: 379 IVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGLIQDG----- 433
Query: 357 YIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQ 416
+ F+ + K E + M++ + GM D
Sbjct: 434 -----------------LRFFNAISCVYALKRTVEH--------YGCMVDLWGRAGMLDD 468
Query: 417 ALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEP-SIEHYLC 475
A L M ++P+A+V+ ++LS C +V D ++ +EP + +Y+
Sbjct: 469 AYRLICDMP----MRPNAIVWGALLSGCR---LVKDTQLAETVLKELIALEPWNAGNYVQ 521
Query: 476 LVDLLGRAGRFDLA 489
L ++ GR+D A
Sbjct: 522 LSNIYSVGGRWDEA 535
>gi|449473751|ref|XP_004153972.1| PREDICTED: pentatricopeptide repeat-containing protein At4g35130,
chloroplastic-like [Cucumis sativus]
Length = 591
Score = 328 bits (841), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 200/595 (33%), Positives = 326/595 (54%), Gaps = 24/595 (4%)
Query: 21 MLQTGVHGNSFTFPLVLKACANINSIW----DGKRVHSHVLKVGFQQDAFVQTGLIDMYS 76
M + V + FT P+V + SIW VH +++GF D + ++++Y
Sbjct: 1 MREVRVEHDGFTLPIVNQVTM---SIWVDVAYAGMVHCVGIRMGFSSDLYFCNTMMEVYG 57
Query: 77 KCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTF 136
KC VS+R V DEMP R +VSW S+ISA+ A+ + + M LE ++ T
Sbjct: 58 KCGCMVSARDVFDEMPNR--DLVSWTSMISAYVNGGDVFCALDIFEGM-RRELEPNSVTV 114
Query: 137 VSVVSGCSFRQ----GISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIG 192
+ ++ C Q G + C V K GLL + L NS + MY++ G+ +E F EI
Sbjct: 115 MVMLQACCATQYLVLGRLLQCYVVKNGLLF-DTHLQNSFLRMYSRLGRQDEFGVFFSEID 173
Query: 193 ETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGN---LFL 249
+ VSW ++ Y ++G++ + + N++ M P + L +++ + L L
Sbjct: 174 FKNAVSWNILMSFYSSMGDIVKVVDILNKI--MGEVPLSIETLTILISGIATSDSRCLML 231
Query: 250 ALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQ 309
++HSL +KSG + L L+ MY K G+LE + +F + +S+ W +M+ + Q
Sbjct: 232 GENLHSLAIKSGLY-DGILCTSLLGMYAKFGELENSTSLFKEIPNRSIVTWGAMMSSFIQ 290
Query: 310 LGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIV--LNGLESNR 367
G+ +AV++FK++ ++P+ L + A A LG+L GK I ++ + N
Sbjct: 291 NGHFDDAVDIFKQMQVAGLKPSVGILKHLIDAYAFLGALQLGKAIHCCLIRIYGFVVCNT 350
Query: 368 QVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHV 427
+++TS+++M+ +CG I A++ F+ + KD+ W++MI GY HG+G ALNLF++M
Sbjct: 351 RLETSVLNMYVRCGSIASARKCFDLIIIKDVVAWTSMIEGYGAHGLGVDALNLFHQMTS- 409
Query: 428 EGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFD 487
E + P+ V + S+LSACSHSG+V +G F SM+S F I+P +EHY C VDLL R+ R
Sbjct: 410 EEVTPNNVTFLSLLSACSHSGLVSEGCEIFYSMRSRFNIKPDLEHYTCFVDLLSRSTRVR 469
Query: 488 LALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFT 547
A I M ++W L+ AC + + ++ YAA LL L P + G Y L++N
Sbjct: 470 EAFAIILRMTSLCDGRIWGALMGACRVYGDNKIANYAAHRLLELEPDNVGYYTLLSNSQA 529
Query: 548 SAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTL 602
S G W EA R L+ ++ L K+PGWS +E++G++ FV+GDRSH+ + +I L
Sbjct: 530 SVGQWHEAEKLRSLVYEKDLVKKPGWSFIELNGTIHGFVSGDRSHNRTNEIYDVL 584
>gi|449463559|ref|XP_004149501.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g14730-like [Cucumis sativus]
gi|449511944|ref|XP_004164096.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g14730-like [Cucumis sativus]
Length = 566
Score = 328 bits (841), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 175/533 (32%), Positives = 295/533 (55%), Gaps = 11/533 (2%)
Query: 69 TGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLG 128
T LI+MYS+C+ + V + P R+V ++N+II+ L + K M +G
Sbjct: 14 TSLINMYSRCNQMEEAVLVFRD-PYHERNVFAYNAIIAGFVANGLAADGFQFYKRMRSVG 72
Query: 129 LELSASTFVSVVSGC-SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSI 187
+ TF VV C F + +H C++K+GL N + + +++++ Y K +A +
Sbjct: 73 VMPDKFTFPCVVRACCEFMEVRKIHGCLFKMGLELN-VFVGSALVNTYLKVDGTEDAEKV 131
Query: 188 FDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNL 247
F+E+ E +V W +I GY +G++N+A + +M ++ +++ +G++
Sbjct: 132 FEELPERDVVLWNAMINGYTKIGHLNKAVVVFKRMGEEGISLSRFTTTSILSILTSMGDI 191
Query: 248 FLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGY 307
++H ++ K GY++ + N L+ MY KC E A +F+ + EK +F W S+I +
Sbjct: 192 NNGRAIHGIVTKMGYSSCVAVSNALIDMYGKCKHTEDALMIFEMINEKDLFSWNSIISAH 251
Query: 308 AQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNR 367
Q + LF ++L + V P+ T+ L AC+ L +L G+EI Y+++NGL N
Sbjct: 252 EQCDDHDGTLRLFGKMLGSRVLPDVITITAVLPACSHLAALMHGREIHGYMIVNGLGKNE 311
Query: 368 Q-----VQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFY 422
+ +++ M++KCG + A +F+ + +KD+A W+ MI GYA+HG G +AL++F+
Sbjct: 312 NGDDVLLNNAIMDMYAKCGCMKNADIIFDLMRNKDVASWNIMIMGYAMHGYGTEALDMFH 371
Query: 423 KMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGR 482
+M + +KPD V + +LSACSH+G V G SF M+ FG+ P+IEHY C++D+LGR
Sbjct: 372 RMCEAQ-IKPDVVTFVGVLSACSHAGFVHQGRSFLTRMELEFGVIPTIEHYTCIIDMLGR 430
Query: 483 AGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPG--STGNYI 540
AG A +P+E +W LL AC H N ELG + + L P +G+YI
Sbjct: 431 AGHLGEAYDLAQRIPLEDNLILWMALLGACRLHGNAELGNVVGEKITQLEPKHCGSGSYI 490
Query: 541 LMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHH 593
LM++L+ G ++EA R M ++ + K PG S +E+ + VF GDR+HH
Sbjct: 491 LMSSLYGVVGRYEEALEVRRTMKEQNVKKTPGCSWIELKDGLYVFSMGDRTHH 543
Score = 192 bits (487), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 117/416 (28%), Positives = 215/416 (51%), Gaps = 17/416 (4%)
Query: 8 NGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFV 67
NG + Y M GV + FTFP V++AC + +++H + K+G + + FV
Sbjct: 55 NGLAADGFQFYKRMRSVGVMPDKFTFPCVVRACCEFMEV---RKIHGCLFKMGLELNVFV 111
Query: 68 QTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVL 127
+ L++ Y K + KV +E+P R VV WN++I+ +++ ++A++V K M
Sbjct: 112 GSALVNTYLKVDGTEDAEKVFEELPE--RDVVLWNAMINGYTKIGHLNKAVVVFKRMGEE 169
Query: 128 GLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNE 183
G+ LS T S++S + G ++H V K+G ++ + ++N+++ MY K +
Sbjct: 170 GISLSRFTTTSILSILTSMGDINNGRAIHGIVTKMG-YSSCVAVSNALIDMYGKCKHTED 228
Query: 184 ARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQ 243
A IF+ I E + SW +II + + + L +M V PD++ ++ C+
Sbjct: 229 ALMIFEMINEKDLFSWNSIISAHEQCDDHDGTLRLFGKMLGSRVLPDVITITAVLPACSH 288
Query: 244 VGNLFLALSMHSLLLKSGY----NNEDP-LDNLLVSMYTKCGDLELARRVFDAVLEKSVF 298
+ L +H ++ +G N +D L+N ++ MY KCG ++ A +FD + K V
Sbjct: 289 LAALMHGREIHGYMIVNGLGKNENGDDVLLNNAIMDMYAKCGCMKNADIIFDLMRNKDVA 348
Query: 299 LWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYI 358
W MI GYA GY +EA+++F R+ + ++P+ T LSAC+ G + +G+ +
Sbjct: 349 SWNIMIMGYAMHGYGTEALDMFHRMCEAQIKPDVVTFVGVLSACSHAGFVHQGRSFLTRM 408
Query: 359 VLN-GLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKD-LAVWSAMINGYAIHG 412
L G+ + T +I M + G + +A ++ +R+P +D L +W A++ +HG
Sbjct: 409 ELEFGVIPTIEHYTCIIDMLGRAGHLGEAYDLAQRIPLEDNLILWMALLGACRLHG 464
Score = 112 bits (280), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 89/329 (27%), Positives = 151/329 (45%), Gaps = 23/329 (6%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI T G + + + M + G+ + FT +L ++ I +G+ +H V K+G
Sbjct: 146 MINGYTKIGHLNKAVVVFKRMGEEGISLSRFTTTSILSILTSMGDINNGRAIHGIVTKMG 205
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+ V LIDMY KC + + + + + + SWNSIISAH + +D + +
Sbjct: 206 YSSCVAVSNALIDMYGKCKHTEDALMIFE--MINEKDLFSWNSIISAHEQCDDHDGTLRL 263
Query: 121 LKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNE----IPLANSVM 172
+M + T +V+ CS G +H + GL NE + L N++M
Sbjct: 264 FGKMLGSRVLPDVITITAVLPACSHLAALMHGREIHGYMIVNGLGKNENGDDVLLNNAIM 323
Query: 173 SMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLV 232
MYAK G + A IFD + + SW +I GY G EA + ++M + PD+V
Sbjct: 324 DMYAKCGCMKNADIIFDLMRNKDVASWNIMIMGYAMHGYGTEALDMFHRMCEAQIKPDVV 383
Query: 233 VFLNLILGCAQVGNLFLALS-MHSLLLKSGYNNEDPLDNLLVSMYTKCGDL----ELARR 287
F+ ++ C+ G + S + + L+ G ++ M + G L +LA+R
Sbjct: 384 TFVGVLSACSHAGFVHQGRSFLTRMELEFGVIPTIEHYTCIIDMLGRAGHLGEAYDLAQR 443
Query: 288 VFDAVLEKSVFLWTSMIG-----GYAQLG 311
+ LE ++ LW +++G G A+LG
Sbjct: 444 I---PLEDNLILWMALLGACRLHGNAELG 469
>gi|449464272|ref|XP_004149853.1| PREDICTED: pentatricopeptide repeat-containing protein At5g55740,
chloroplastic-like [Cucumis sativus]
gi|449520209|ref|XP_004167126.1| PREDICTED: pentatricopeptide repeat-containing protein At5g55740,
chloroplastic-like [Cucumis sativus]
Length = 840
Score = 328 bits (840), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 200/614 (32%), Positives = 323/614 (52%), Gaps = 41/614 (6%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI N T NG E + T+ M GV T L A AN++ I +GK+ H+ + G
Sbjct: 253 MIVNFTQNGLNAEAVETFYEMRVEGVAPTQVTLSSFLSASANLSVIDEGKQGHALAVLSG 312
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+ + + LI+ YSK + V EM + V+WN ++S + L D A+ +
Sbjct: 313 LELTNILGSSLINFYSKVGLVEDAELVFSEM--LEKDTVTWNLLVSGYVHNGLVDRALDL 370
Query: 121 LKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGLLNN---EIPLANSVMSMYAK 177
M L + T S+++ + + + + + + NN ++ +A+S++ MYAK
Sbjct: 371 CHVMQSENLRFDSVTLASIMAAAADSRNLKLGKEGHSFCVRNNLESDVAVASSIIDMYAK 430
Query: 178 FGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNL 237
K+ AR +FD + ++ W T++ Y G+ E L QM+ + P+++ + ++
Sbjct: 431 CEKLECARRVFDATAKRDLIMWNTLLAAYAEQGHSGETLKLFYQMQLEGLPPNVISWNSV 490
Query: 238 ILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTK--CGDLELARRVFDAVLEK 295
ILG G + D + + M + C +L
Sbjct: 491 ILGLLNKGKV------------------DQAKDTFMEMQSLGICPNL------------- 519
Query: 296 SVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIE 355
WT++I G AQ G EA F+ + + ++PN ++++ LSAC+ + SL G+ I
Sbjct: 520 --ITWTTLICGLAQNGLGDEAFLTFQSMEEAGIKPNSLSISSLLSACSTMASLPHGRAIH 577
Query: 356 EYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGD 415
YI + L + V SL++M++KCG IN+AK VF+ + K+L V++AMI+GYA+HG
Sbjct: 578 CYITRHELSVSTPVLCSLVNMYAKCGSINQAKRVFDMILKKELPVYNAMISGYALHGQAV 637
Query: 416 QALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLC 475
+AL+LF +++ E +KPD + +TSILSAC H+G+V +GL F M SN I EHY C
Sbjct: 638 EALSLFRRLKE-ECIKPDEITFTSILSACGHAGLVREGLELFIDMVSNHKIVAQAEHYGC 696
Query: 476 LVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGS 535
LV +L R+ D AL+ I MP E A ++ LL+AC +H + EL E + LL L P +
Sbjct: 697 LVSILSRSHNLDEALRIILGMPFEPDAFIFGSLLAACREHPDFELKERLFERLLKLEPDN 756
Query: 536 TGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLS 595
+GNY+ ++N + + GMW EA+ RGLM +R L+K PG S ++I VF AGD+SH +
Sbjct: 757 SGNYVALSNAYAATGMWDEASKVRGLMKERSLSKIPGHSLIQIGNKTHVFFAGDKSHSRT 816
Query: 596 VDIRKTLKELHIKL 609
+I L L +++
Sbjct: 817 KEIYMMLALLRVEM 830
Score = 209 bits (531), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 141/467 (30%), Positives = 241/467 (51%), Gaps = 11/467 (2%)
Query: 36 VLKACANINSIWDGKRVHSHVLKVG--FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPV 93
+L+ C ++ G+++H +LK G ++ +++T L+ YSKC + + ++ ++ V
Sbjct: 84 LLQGCVYERALSLGQQIHGRILKNGESIAKNEYIETKLVIFYSKCDESEIANRLFGKLQV 143
Query: 94 RLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTF-VSVVSGCSFRQ---GI 149
+ + SW +I+ SR N EA++ +EM GL L ++ + + R G
Sbjct: 144 Q--NEFSWAAIMGLKSRMGFNQEALMGFREMHEYGLLLDNFVIPIAFKASGALRWIGFGK 201
Query: 150 SMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNV 209
S+H V K+GL I +A S++ MY K G EA+ +FD+I E +IV+W ++I +
Sbjct: 202 SVHAYVVKMGL-GGCIYVATSLLDMYGKCGLCEEAKKVFDKILEKNIVAWNSMIVNFTQN 260
Query: 210 GNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLD 269
G EA +MR V P V + + A + + H+L + SG + L
Sbjct: 261 GLNAEAVETFYEMRVEGVAPTQVTLSSFLSASANLSVIDEGKQGHALAVLSGLELTNILG 320
Query: 270 NLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVR 329
+ L++ Y+K G +E A VF +LEK W ++ GY G A++L + ++R
Sbjct: 321 SSLINFYSKVGLVEDAELVFSEMLEKDTVTWNLLVSGYVHNGLVDRALDLCHVMQSENLR 380
Query: 330 PNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEV 389
+ TLA+ ++A A+ +L GKE + V N LES+ V +S+I M++KC ++ A+ V
Sbjct: 381 FDSVTLASIMAAAADSRNLKLGKEGHSFCVRNNLESDVAVASSIIDMYAKCEKLECARRV 440
Query: 390 FERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGM 449
F+ +DL +W+ ++ YA G + L LFY+MQ +EGL P+ + + S++ + G
Sbjct: 441 FDATAKRDLIMWNTLLAAYAEQGHSGETLKLFYQMQ-LEGLPPNVISWNSVILGLLNKGK 499
Query: 450 VDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEM 496
VD F MQS GI P++ + L+ L + G D A T M
Sbjct: 500 VDQAKDTFMEMQS-LGICPNLITWTTLICGLAQNGLGDEAFLTFQSM 545
Score = 189 bits (479), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 144/517 (27%), Positives = 259/517 (50%), Gaps = 53/517 (10%)
Query: 9 GSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQ 68
G +E L + M + G+ ++F P+ KA + I GK VH++V+K+G +V
Sbjct: 160 GFNQEALMGFREMHEYGLLLDNFVIPIAFKASGALRWIGFGKSVHAYVVKMGLGGCIYVA 219
Query: 69 TGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLG 128
T L+DMY KC ++KV D+ + +++V+WNS+I ++ LN EA+ EM V G
Sbjct: 220 TSLLDMYGKCGLCEEAKKVFDK--ILEKNIVAWNSMIVNFTQNGLNAEAVETFYEMRVEG 277
Query: 129 L---ELSASTFVSVVSGCS-FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEA 184
+ +++ S+F+S + S +G H GL I L +S+++ Y+K G V +A
Sbjct: 278 VAPTQVTLSSFLSASANLSVIDEGKQGHALAVLSGLELTNI-LGSSLINFYSKVGLVEDA 336
Query: 185 RSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQV 244
+F E+ E V+W ++ GYV+ G V+ A LC+ M+ ++ D V +++ A
Sbjct: 337 ELVFSEMLEKDTVTWNLLVSGYVHNGLVDRALDLCHVMQSENLRFDSVTLASIMAAAADS 396
Query: 245 GNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMI 304
NL L HS +++ ++ + + ++ MY KC LE ARRVFDA ++ + +W +++
Sbjct: 397 RNLKLGKEGHSFCVRNNLESDVAVASSIIDMYAKCEKLECARRVFDATAKRDLIMWNTLL 456
Query: 305 GGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLE 364
YA+ G+ E + LF ++ + PN + + + LG L+KGK
Sbjct: 457 AAYAEQGHSGETLKLFYQMQLEGLPPNVISWNSVI-----LGLLNKGK------------ 499
Query: 365 SNRQVQTSLIHMFSKCGRINKAKEVFERVPD----KDLAVWSAMINGYAIHGMGDQALNL 420
+++AK+ F + +L W+ +I G A +G+GD+A
Sbjct: 500 ------------------VDQAKDTFMEMQSLGICPNLITWTTLICGLAQNGLGDEAFLT 541
Query: 421 FYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIE-HYLC-LVD 478
F M+ G+KP+++ +S+LSACS + G + + + E S+ LC LV+
Sbjct: 542 FQSMEEA-GIKPNSLSISSLLSACSTMASLPHGRAIHCYITRH---ELSVSTPVLCSLVN 597
Query: 479 LLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKH 515
+ + G + A K + +M ++ + V+ ++S H
Sbjct: 598 MYAKCGSINQA-KRVFDMILKKELPVYNAMISGYALH 633
Score = 123 bits (308), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 75/265 (28%), Positives = 143/265 (53%), Gaps = 7/265 (2%)
Query: 193 ETSIVSWTTIIGGYVNVGNVNEAFGLCN--QMRRMSVTPDLVVFLNLILGCAQVGNLFLA 250
+ S S+ I G++ EA L ++ +++ PD V+ L+ GC L L
Sbjct: 40 QISYKSYLNHISSLCKQGHLLEALDLVTDLELEDITIGPD--VYGELLQGCVYERALSLG 97
Query: 251 LSMHSLLLKSGYN--NEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYA 308
+H +LK+G + + ++ LV Y+KC + E+A R+F + ++ F W +++G +
Sbjct: 98 QQIHGRILKNGESIAKNEYIETKLVIFYSKCDESEIANRLFGKLQVQNEFSWAAIMGLKS 157
Query: 309 QLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQ 368
++G+ EA+ F+ + + + + + A L + GK + Y+V GL
Sbjct: 158 RMGFNQEALMGFREMHEYGLLLDNFVIPIAFKASGALRWIGFGKSVHAYVVKMGLGGCIY 217
Query: 369 VQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVE 428
V TSL+ M+ KCG +AK+VF+++ +K++ W++MI + +G+ +A+ FY+M+ VE
Sbjct: 218 VATSLLDMYGKCGLCEEAKKVFDKILEKNIVAWNSMIVNFTQNGLNAEAVETFYEMR-VE 276
Query: 429 GLKPDAVVYTSILSACSHSGMVDDG 453
G+ P V +S LSA ++ ++D+G
Sbjct: 277 GVAPTQVTLSSFLSASANLSVIDEG 301
>gi|296082168|emb|CBI21173.3| unnamed protein product [Vitis vinifera]
Length = 654
Score = 328 bits (840), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 189/595 (31%), Positives = 311/595 (52%), Gaps = 11/595 (1%)
Query: 34 PLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPV 93
PL + ++ +++ H +K G + +I Y+KC + + K+ E
Sbjct: 3 PLHSLSQSSFTALYRASVNHCLAIKSGTTASIYTANNIISGYAKCGEIRIASKMFGE--T 60
Query: 94 RLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCS----FRQGI 149
R VSWN++I+ + A+ LK M G + +F S++ G + G
Sbjct: 61 SQRDAVSWNTMIAGFVNLGNFETALEFLKSMKRYGFAVDGYSFGSILKGVACVGYVEVGQ 120
Query: 150 SMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNV 209
+H + K+G N + ++++ MYAK +V +A +F I + V+W +I GY V
Sbjct: 121 QVHSMMVKMGYEGN-VFAGSALLDMYAKCERVEDAFEVFKSINIRNSVTWNALISGYAQV 179
Query: 210 GNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLD 269
G+ AF L + M V D F L+ L +H+ ++K G ++ +
Sbjct: 180 GDRGTAFWLLDCMELEGVEIDDGTFAPLLTLLDDPDLHKLTTQVHAKIVKHGLASDTTVC 239
Query: 270 NLLVSMYTKCGDLELARRVFDAVLEKSVF---LWTSMIGGYAQLGYPSEAVNLFKRLLKT 326
N +++ Y++CG +E A RVFD +E W S++ G++Q G +A+ F+ +
Sbjct: 240 NAIITAYSECGSIEDAERVFDGAIETRDLDHVSWNSILTGFSQSGLSEDALKFFENMRSQ 299
Query: 327 SVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKA 386
V + + L +C++L +L G+++ ++ +G E N V +SLI M+SKCG I A
Sbjct: 300 YVVIDHYAFSAVLRSCSDLATLQLGQQVHVLVLKSGFEPNGFVASSLIFMYSKCGVIEDA 359
Query: 387 KEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSH 446
++ F+ P W+++I GYA HG G AL+LF+ M+ +K D + + ++L+ACSH
Sbjct: 360 RKSFDATPKDSSIAWNSLIFGYAQHGRGKIALDLFFLMKD-RRVKLDHITFVAVLTACSH 418
Query: 447 SGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWA 506
G+V++G SF KSM+S++GI P +EHY C++DLLGRAGR D A I MP E A VW
Sbjct: 419 IGLVEEGWSFLKSMESDYGIPPRMEHYACMIDLLGRAGRLDEAKALIEAMPFEPDAMVWK 478
Query: 507 PLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRR 566
LL AC ++EL A +LL L P Y+L++++F W E A+ + LM +R
Sbjct: 479 TLLGACRTCGDIELASQVASHLLELEPEEHCTYVLLSSMFGHLRRWNEKASIKRLMKERG 538
Query: 567 LTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKELHIKLLEAGYIAEADIV 621
+ K PGWS +E+ V+ F A DRSH +I L EL ++ Y+A ++ +
Sbjct: 539 VKKVPGWSWIEVKNEVRSFNAEDRSHPNCEEIYLRLGELMEEIRRLDYVANSEFL 593
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 117/419 (27%), Positives = 212/419 (50%), Gaps = 22/419 (5%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI N G+FE L SM + G + ++F +LK A + + G++VHS ++K+G
Sbjct: 71 MIAGFVNLGNFETALEFLKSMKRYGFAVDGYSFGSILKGVACVGYVEVGQQVHSMMVKMG 130
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
++ + F + L+DMY+KC + +V + +R+ V+WN++IS +++ A +
Sbjct: 131 YEGNVFAGSALLDMYAKCERVEDAFEVFK--SINIRNSVTWNALISGYAQVGDRGTAFWL 188
Query: 121 LKEMWVLGLELSASTFV----SVVSGCSFRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
L M + G+E+ TF + + +H + K GL ++ + N++++ Y+
Sbjct: 189 LDCMELEGVEIDDGTFAPLLTLLDDPDLHKLTTQVHAKIVKHGLASD-TTVCNAIITAYS 247
Query: 177 KFGKVNEARSIFD---EIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVV 233
+ G + +A +FD E + VSW +I+ G+ G +A MR V D
Sbjct: 248 ECGSIEDAERVFDGAIETRDLDHVSWNSILTGFSQSGLSEDALKFFENMRSQYVVIDHYA 307
Query: 234 FLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVL 293
F ++ C+ + L L +H L+LKSG+ + + L+ MY+KCG +E AR+ FDA
Sbjct: 308 FSAVLRSCSDLATLQLGQQVHVLVLKSGFEPNGFVASSLIFMYSKCGVIEDARKSFDATP 367
Query: 294 EKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKE 353
+ S W S+I GYAQ G A++LF + V+ + T L+AC+ +G + +G
Sbjct: 368 KDSSIAWNSLIFGYAQHGRGKIALDLFFLMKDRRVKLDHITFVAVLTACSHIGLVEEG-- 425
Query: 354 IEEYIVLNGLESNRQVQTSLIH------MFSKCGRINKAKEVFERVP-DKDLAVWSAMI 405
+ L +ES+ + + H + + GR+++AK + E +P + D VW ++
Sbjct: 426 ---WSFLKSMESDYGIPPRMEHYACMIDLLGRAGRLDEAKALIEAMPFEPDAMVWKTLL 481
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 119/257 (46%), Gaps = 38/257 (14%)
Query: 6 TNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDA 65
+ +G E+ L + +M V + + F VL++C+++ ++ G++VH VLK GF+ +
Sbjct: 281 SQSGLSEDALKFFENMRSQYVVIDHYAFSAVLRSCSDLATLQLGQQVHVLVLKSGFEPNG 340
Query: 66 FVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSII---SAHSRACLNDEAILVLK 122
FV + LI MYSKC +RK D P S ++WNS+I + H R + + ++K
Sbjct: 341 FVASSLIFMYSKCGVIEDARKSFDATPK--DSSIAWNSLIFGYAQHGRGKIALDLFFLMK 398
Query: 123 EMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVN 182
+ V +L TFV+V++ CS +GL+ S+ S Y ++
Sbjct: 399 DRRV---KLDHITFVAVLTACS------------HIGLVEEGWSFLKSMESDYGIPPRME 443
Query: 183 EARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCA 242
+ D +G G ++EA L + M PD +V+ L+ C
Sbjct: 444 HYACMIDLLGRA---------------GRLDEAKAL---IEAMPFEPDAMVWKTLLGACR 485
Query: 243 QVGNLFLALSMHSLLLK 259
G++ LA + S LL+
Sbjct: 486 TCGDIELASQVASHLLE 502
>gi|225450995|ref|XP_002284834.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g05240 [Vitis vinifera]
Length = 565
Score = 328 bits (840), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 178/545 (32%), Positives = 298/545 (54%), Gaps = 22/545 (4%)
Query: 50 KRVHSHVLKVGFQQDAFVQTGLIDM--YSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISA 107
KR+H ++ QD + L+D YS + ++ V ++ + S+ WNS+I
Sbjct: 22 KRLHGLMITTSVIQDVIPLSRLVDFCAYSDSGNLNYAKSVFNQ--IDRPSLYIWNSMIKG 79
Query: 108 HSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCSFRQGISM----HCCVYKLGLLNN 163
+S + DEA+ + +EM G TF V+ CS G ++ H C+ K G
Sbjct: 80 YSISESPDEALTMYREMRQKGYAPDHFTFPFVLKACSLVNGYNLGQCVHNCIVKTGF-EV 138
Query: 164 EIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMR 223
++ A +++ MYA G + A +FD+I + ++V+WT++I G ++ +EA + M
Sbjct: 139 DVYAATALLQMYAACGDMEAALKVFDDIPKWNVVAWTSLIAGCISNDCPSEAVRVYKDME 198
Query: 224 RMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDP----------LDNLLV 273
SV P+ + +N+++ CA+ +L +H ++G DP L +V
Sbjct: 199 LWSVAPNEITMVNVLVACARSRDLNAGRWVHD---RTGQMGLDPFQSNSNFNVILATAIV 255
Query: 274 SMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEA 333
MY KCG L+ AR +F+ + +++ W SMIG Y Q G +EA++LF + P++A
Sbjct: 256 DMYAKCGSLKTARDLFNKMPHRNLVAWNSMIGAYNQYGQANEALDLFSDMRIAGFDPDKA 315
Query: 334 TLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERV 393
T + ACA LG+L G+ + Y+ L + + T+L+ M++K G +A++VF +
Sbjct: 316 TFLCVIGACAHLGALVSGQALHAYVSKTNLTDDTAIGTALVDMYAKSGDAERAQQVFSEL 375
Query: 394 PDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDG 453
KD+ W+++I G A+HG G++AL F KMQ L PD + Y +LSACSH G V+DG
Sbjct: 376 QKKDVTAWTSLIIGLAMHGHGEEALTFFKKMQEDTALIPDEITYIGVLSACSHVGKVEDG 435
Query: 454 LSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACM 513
+ F SM++ GIEP+ +HY C+VDLL RAGR A + + +MPVE +W+ LL+ C
Sbjct: 436 KNHFISMKNVHGIEPTTQHYGCMVDLLSRAGRLGEAERLVEKMPVEPNTAIWSALLNGCK 495
Query: 514 KHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGW 573
+ N+++ + + + L +G Y+L++N++ A W+E AR LM +R++ K G
Sbjct: 496 IYQNIDVADRVRRRVRELEVDGSGVYVLLSNIYAGACRWEEVKMARELMKERKIQKSLGH 555
Query: 574 SQVEI 578
S VE+
Sbjct: 556 SSVEM 560
Score = 239 bits (611), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 140/426 (32%), Positives = 236/426 (55%), Gaps = 19/426 (4%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI+ + + S +E L+ Y M Q G + FTFP VLKAC+ +N G+ VH+ ++K G
Sbjct: 76 MIKGYSISESPDEALTMYREMRQKGYAPDHFTFPFVLKACSLVNGYNLGQCVHNCIVKTG 135
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F+ D + T L+ MY+ C D ++ KV D++P +VV+W S+I+ EA+ V
Sbjct: 136 FEVDVYAATALLQMYAACGDMEAALKVFDDIPK--WNVVAWTSLIAGCISNDCPSEAVRV 193
Query: 121 LKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGL------LNNEIPLANS 170
K+M + + + T V+V+ C+ G +H ++GL N + LA +
Sbjct: 194 YKDMELWSVAPNEITMVNVLVACARSRDLNAGRWVHDRTGQMGLDPFQSNSNFNVILATA 253
Query: 171 VMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPD 230
++ MYAK G + AR +F+++ ++V+W ++IG Y G NEA L + MR PD
Sbjct: 254 IVDMYAKCGSLKTARDLFNKMPHRNLVAWNSMIGAYNQYGQANEALDLFSDMRIAGFDPD 313
Query: 231 LVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFD 290
FL +I CA +G L ++H+ + K+ ++ + LV MY K GD E A++VF
Sbjct: 314 KATFLCVIGACAHLGALVSGQALHAYVSKTNLTDDTAIGTALVDMYAKSGDAERAQQVFS 373
Query: 291 AVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLK-TSVRPNEATLATTLSACAELGSLS 349
+ +K V WTS+I G A G+ EA+ FK++ + T++ P+E T LSAC+ +G +
Sbjct: 374 ELQKKDVTAWTSLIIGLAMHGHGEEALTFFKKMQEDTALIPDEITYIGVLSACSHVGKVE 433
Query: 350 KGKEIEEYIVL---NGLESNRQVQTSLIHMFSKCGRINKAKEVFERVP-DKDLAVWSAMI 405
GK +I + +G+E Q ++ + S+ GR+ +A+ + E++P + + A+WSA++
Sbjct: 434 DGK--NHFISMKNVHGIEPTTQHYGCMVDLLSRAGRLGEAERLVEKMPVEPNTAIWSALL 491
Query: 406 NGYAIH 411
NG I+
Sbjct: 492 NGCKIY 497
>gi|297819536|ref|XP_002877651.1| hypothetical protein ARALYDRAFT_485272 [Arabidopsis lyrata subsp.
lyrata]
gi|297323489|gb|EFH53910.1| hypothetical protein ARALYDRAFT_485272 [Arabidopsis lyrata subsp.
lyrata]
Length = 1217
Score = 328 bits (840), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 188/574 (32%), Positives = 303/574 (52%), Gaps = 41/574 (7%)
Query: 50 KRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHS 109
+ VHS ++ + ++ + L+ Y+ D ++RKV DE+P R +V+ N +I ++
Sbjct: 60 RTVHSRIISEDLRYNSSLGVKLMRAYASLKDVATARKVFDEIPER--NVIIINVMIRSYV 117
Query: 110 RACLNDEAILVLKEMWVLGLELSASTFVSVVSGCSFRQGI----SMHCCVYKLGLLNNEI 165
E I V M ++ TF V+ CS I +H K+GL ++ +
Sbjct: 118 NNGFYREGIQVFGTMCSCHVKPDHYTFPCVLKACSCSGNIVIGKKIHGSATKVGL-SSTL 176
Query: 166 PLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRM 225
+ N ++SMY K G ++EAR + DE+ +VSW +++ GY ++A +C +M +
Sbjct: 177 FVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVAGYAQNQRFDDALEVCREMESV 236
Query: 226 SVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELA 285
++ D A +M SLL + + MY K
Sbjct: 237 KISHD-------------------AGTMASLLPAVSNTTTENV------MYVK------- 264
Query: 286 RRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAEL 345
+F + +KS+ W MIG Y + P EAV L+ + P+ ++ + L AC +
Sbjct: 265 -DMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSGMEADGFEPDAVSITSVLPACGDT 323
Query: 346 GSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMI 405
+LS GK+I YI L N ++ +LI M++KCG +++A++VFE + +D+ W+AMI
Sbjct: 324 SALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLDRARDVFENMKSRDVVSWTAMI 383
Query: 406 NGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFG 465
+ Y G G A+ LF KMQ GL PD++ + + L+ACSH+G++++G S FK M ++
Sbjct: 384 SAYGFSGRGCDAVALFSKMQD-SGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYK 442
Query: 466 IEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAA 525
I P +EH C+VDLLGRAG+ A K I EMP+E +VW LL AC H N ++G AA
Sbjct: 443 ITPRLEHLACMVDLLGRAGKVKEAYKFIQEMPMEPNERVWGALLGACRVHSNTDIGLLAA 502
Query: 526 KNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVF 585
L L P +G Y+L++N++ AG W+E R +M + L K PG S VE++ + F
Sbjct: 503 DKLFQLAPEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGASNVEVNRIIHTF 562
Query: 586 VAGDRSHHLSVDIRKTLKELHIKLLEAGYIAEAD 619
+ GDRSH S +I + L L K+ E GY+ +++
Sbjct: 563 LVGDRSHPQSAEIYRELDVLVKKMKELGYVPDSE 596
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 123/426 (28%), Positives = 198/426 (46%), Gaps = 46/426 (10%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MIR+ NNG + E + + +M V + +TFP VLKAC+ +I GK++H KVG
Sbjct: 112 MIRSYVNNGFYREGIQVFGTMCSCHVKPDHYTFPCVLKACSCSGNIVIGKKIHGSATKVG 171
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
FV GL+ MY KC +R VLDEM R VVSWNS+++ +++ D+A+ V
Sbjct: 172 LSSTLFVGNGLVSMYGKCGFLSEARLVLDEMS--RRDVVSWNSLVAGYAQNQRFDDALEV 229
Query: 121 LKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGLLNNEIPLANSVMS--MYAKF 178
+EM + + A T S++ S N+ MY K
Sbjct: 230 CREMESVKISHDAGTMASLLPAVS------------------------NTTTENVMYVK- 264
Query: 179 GKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLI 238
+F ++G+ S+VSW +IG Y+ EA L + M PD V +++
Sbjct: 265 -------DMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSGMEADGFEPDAVSITSVL 317
Query: 239 LGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVF 298
C L L +H + + L+N L+ MY KCG L+ AR VF+ + + V
Sbjct: 318 PACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLDRARDVFENMKSRDVV 377
Query: 299 LWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKE----- 353
WT+MI Y G +AV LF ++ + + P+ TTL+AC+ G L +G+
Sbjct: 378 SWTAMISAYGFSGRGCDAVALFSKMQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLM 437
Query: 354 IEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVP-DKDLAVWSAMINGYAIHG 412
+ Y + LE ++ + + G++ +A + + +P + + VW A++ +H
Sbjct: 438 TDHYKITPRLEH----LACMVDLLGRAGKVKEAYKFIQEMPMEPNERVWGALLGACRVHS 493
Query: 413 MGDQAL 418
D L
Sbjct: 494 NTDIGL 499
>gi|302765565|ref|XP_002966203.1| hypothetical protein SELMODRAFT_86405 [Selaginella moellendorffii]
gi|300165623|gb|EFJ32230.1| hypothetical protein SELMODRAFT_86405 [Selaginella moellendorffii]
Length = 916
Score = 327 bits (839), Expect = 9e-87, Method: Compositional matrix adjust.
Identities = 197/628 (31%), Positives = 335/628 (53%), Gaps = 19/628 (3%)
Query: 7 NNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAF 66
N+ + L M G+ N +F +L +C + +S+ + +H+ V ++GF D
Sbjct: 210 NDERPDRALLLVRRMWLEGLLPNRASFVAILSSCGDHSSLPLARSIHARVEELGFLGDVV 269
Query: 67 VQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWV 126
V T L+ MY +C S V + M VR + VSWN++I+A ++ A + M
Sbjct: 270 VATALVTMYGRCGSVDESIAVFEAMAVR--NHVSWNAMIAAFAQCGHRSAAFAIYWRMQQ 327
Query: 127 LGLELSASTFVSVV-SGCS-----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGK 180
G + TFV+ + + CS + ++H + GL ++ + ++++MY G
Sbjct: 328 EGFRPNKITFVTALKAACSSSSQDLGESAALHGWIACAGL-EGDVMVGTALVTMYGSTGA 386
Query: 181 VNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILG 240
++ AR+ FD I +IVSW ++ Y + G EA L M+R S+ P+ V +L +LG
Sbjct: 387 IDRARAAFDAIPAKNIVSWNAMLTAYGDNGRAREAMELFAAMKRQSLAPNKVSYL-AVLG 445
Query: 241 CAQVGNLFLALSMHSLLLKSG-YNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFL 299
C + ++ A S+H+ ++ +G + E + N +V M+ + G LE A FDA + K
Sbjct: 446 CCE--DVSEARSIHAEVVGNGLFAQESSIANGVVRMFARSGSLEEAMAAFDATVVKDSVS 503
Query: 300 WTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIV 359
W + + + A+ F + RP++ TL + + CA+LG+L G+ I++ +
Sbjct: 504 WNTKVAALSAREDLHGAITAFYTMQHEGFRPDKFTLVSVVDVCADLGTLELGRSIQQQLS 563
Query: 360 LN-GLESNRQVQTSLIHMFSKCGR-INKAKEVFERVPD--KDLAVWSAMINGYAIHGMGD 415
+E + V++++++M +KCG +++ + +F R+PD KDL W+ MI YA HG G
Sbjct: 564 AAIEVERDVVVESAVMNMVAKCGSSVDECERLFARMPDDRKDLVAWNTMIAAYAQHGHGR 623
Query: 416 QALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPS-IEHYL 474
+AL LF MQ ++PD+ + S+LS CSH+G+V+DG+ F + GIE +EHY
Sbjct: 624 KALKLFRIMQQRSSVRPDSSTFVSVLSGCSHAGLVEDGIHCFFLAREVLGIEQQPVEHYA 683
Query: 475 CLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPG 534
CLVD+LGR G A I +MP+ + VW LL AC + ++E GE AA+ + L
Sbjct: 684 CLVDVLGRMGYLREAEDFIRKMPLPADSVVWTSLLGACSSYGDLEGGERAARAFIELYRS 743
Query: 535 STGNYILMANLFTSAGMWKEAATARGLMDDRRLTKE-PGWSQVEIDGSVQVFVAGDRSHH 593
+ Y++++N++ +AG W+++ R M +RR+ K PG S + + V F A DRSH
Sbjct: 744 DSVGYVVLSNIYAAAGRWEDSIRVREDMAERRVKKRAPGKSSIVVKNRVHEFFARDRSHP 803
Query: 594 LSVDIRKTLKELHIKLLEAGYIAEADIV 621
S +I L+ L + EAGY+ + +V
Sbjct: 804 QSDEIYAELERLKGLIREAGYVPDTRLV 831
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 119/480 (24%), Positives = 224/480 (46%), Gaps = 36/480 (7%)
Query: 32 TFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEM 91
T +L+ C + G+++H ++K G ++ + L+ MYSKC + +
Sbjct: 26 TLAGLLRRCIGDADLAQGRQLHRQIVKQGLARNDLLGNYLVQMYSKCRSLDDANAAFSAL 85
Query: 92 PVRLRSVVSWNSIISAHS----------RACLNDEAILVLKEMWVLGLELSASTFVSVVS 141
R R + +WN++I+A S R L + A + ++ + + ++ S
Sbjct: 86 --RSRGIATWNTLIAAQSSPAAVFDLYTRMKLEERAENRPNRLTIIAVLGAIASGDPSSS 143
Query: 142 GCSFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSW-T 200
S Q +H + + L ++ +A +++ Y K G V A +F I ++ W
Sbjct: 144 SSSRAQARIVHDDI-RGSDLERDLFVATALLDAYGKCGCVESALEVFSRIQVPDLICWNA 202
Query: 201 TIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKS 260
I+ N + A L +M + P+ F+ ++ C +L LA S+H+ + +
Sbjct: 203 AIMACAGNDERPDRALLLVRRMWLEGLLPNRASFVAILSSCGDHSSLPLARSIHARVEEL 262
Query: 261 GYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLF 320
G+ + + LV+MY +CG ++ + VF+A+ ++ W +MI +AQ G+ S A ++
Sbjct: 263 GFLGDVVVATALVTMYGRCGSVDESIAVFEAMAVRNHVSWNAMIAAFAQCGHRSAAFAIY 322
Query: 321 KRLLKTSVRPNEATLATTLSACAELGS--LSKGKEIEEYIVLNGLESNRQVQTSLIHMFS 378
R+ + RPN+ T T L A S L + + +I GLE + V T+L+ M+
Sbjct: 323 WRMQQEGFRPNKITFVTALKAACSSSSQDLGESAALHGWIACAGLEGDVMVGTALVTMYG 382
Query: 379 KCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYT 438
G I++A+ F+ +P K++ W+AM+ Y +G +A+ LF M+ + L P+ V Y
Sbjct: 383 STGAIDRARAAFDAIPAKNIVSWNAMLTAYGDNGRAREAMELFAAMKR-QSLAPNKVSYL 441
Query: 439 SILSACS--------HSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLAL 490
++L C H+ +V +GL F E SI + +V + R+G + A+
Sbjct: 442 AVLGCCEDVSEARSIHAEVVGNGL---------FAQESSIANG--VVRMFARSGSLEEAM 490
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 142/575 (24%), Positives = 255/575 (44%), Gaps = 57/575 (9%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINS--IWDGKRVHSHVLK 58
MI G + Y M Q G N TF LKA + +S + + +H +
Sbjct: 305 MIAAFAQCGHRSAAFAIYWRMQQEGFRPNKITFVTALKAACSSSSQDLGESAALHGWIAC 364
Query: 59 VGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAI 118
G + D V T L+ MY +R D +P +++VSWN++++A+ EA+
Sbjct: 365 AGLEGDVMVGTALVTMYGSTGAIDRARAAFDAIPA--KNIVSWNAMLTAYGDNGRAREAM 422
Query: 119 LVLKEMWVLGLELSASTFVSVVSGC-SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAK 177
+ M L + ++++V+ C + S+H V GL E +AN V+ M+A+
Sbjct: 423 ELFAAMKRQSLAPNKVSYLAVLGCCEDVSEARSIHAEVVGNGLFAQESSIANGVVRMFAR 482
Query: 178 FGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNL 237
G + EA + FD VSW T + +++ A M+ PD +++
Sbjct: 483 SGSLEEAMAAFDATVVKDSVSWNTKVAALSAREDLHGAITAFYTMQHEGFRPDKFTLVSV 542
Query: 238 ILGCAQVGNLFLALSMHSLLLKSGYNNED-PLDNLLVSMYTKCG-DLELARRVFDAVLE- 294
+ CA +G L L S+ L + D +++ +++M KCG ++ R+F + +
Sbjct: 543 VDVCADLGTLELGRSIQQQLSAAIEVERDVVVESAVMNMVAKCGSSVDECERLFARMPDD 602
Query: 295 -KSVFLWTSMIGGYAQLGYPSEAVNLFKRL-LKTSVRPNEATLATTLSACAELGSLSKGK 352
K + W +MI YAQ G+ +A+ LF+ + ++SVRP+ +T + LS C+ G + G
Sbjct: 603 RKDLVAWNTMIAAYAQHGHGRKALKLFRIMQQRSSVRPDSSTFVSVLSGCSHAGLVEDG- 661
Query: 353 EIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHG 412
IH F A+EV + + + ++ +++ G
Sbjct: 662 ---------------------IHCFF------LAREVLG-IEQQPVEHYACLVDVLGRMG 693
Query: 413 MGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEH 472
+A + KM L D+VV+TS+L ACS G ++ G ++ + +
Sbjct: 694 YLREAEDFIRKMP----LPADSVVWTSLLGACSSYGDLEGGERAARAFIELYRSDSV--G 747
Query: 473 YLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLN 532
Y+ L ++ AGR++ +++ +M E + + AP S+ + + V E+ A++ +
Sbjct: 748 YVVLSNIYAAAGRWEDSIRVREDM-AERRVKKRAPGKSSIVVKNRVH--EFFARD--RSH 802
Query: 533 PGSTGNYILMANLFTSAGMWKEAATARGLMDDRRL 567
P S Y A L G+ +EA G + D RL
Sbjct: 803 PQSDEIY---AELERLKGLIREA----GYVPDTRL 830
>gi|449501934|ref|XP_004161498.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Cucumis sativus]
Length = 638
Score = 327 bits (839), Expect = 9e-87, Method: Compositional matrix adjust.
Identities = 179/515 (34%), Positives = 284/515 (55%), Gaps = 6/515 (1%)
Query: 112 CLNDEAILVLKEMWVLGLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPL 167
C + + L +M +LG E+ + S+++ C + R+G +H + K L + + L
Sbjct: 41 CSSGQLKEALLQMAILGREVKFEGYDSILNECVSQRAIREGQRVHTHMIKTCYLPS-VYL 99
Query: 168 ANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSV 227
++ +Y K + +AR +FDE+ + ++VSWT +I Y G EA L +M R
Sbjct: 100 RTRLIVLYNKCDCLGDARGMFDEMPQRNVVSWTAMISAYSQRGFAFEALNLFVEMLRSDT 159
Query: 228 TPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARR 287
P+ F ++ C +HS+ +K Y + + + L+ MY K G + A
Sbjct: 160 EPNHFTFATILTSCYGSLGFETGRQIHSIAIKRNYESHMFVGSSLLDMYAKSGRICDAHG 219
Query: 288 VFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGS 347
VF + E+ V T++I GYAQ+G EA+ LF++L + N T A+ L+A + L +
Sbjct: 220 VFHCLPERDVVACTAIISGYAQMGLDEEALKLFRQLQIEGMNSNSVTYASVLTALSGLAA 279
Query: 348 LSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMING 407
L+ GK++ +++ +G S + SLI M+SKCG + A+ +F+ +P++ W+AM+ G
Sbjct: 280 LNHGKQVHSHVLRSGQYSYVVLLNSLIDMYSKCGNVCYARRIFDSMPERTCISWNAMLVG 339
Query: 408 YAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSM-QSNFGI 466
Y+ HGM + L LF M+ +KPD++ Y ++LS CSH + D GL F +M GI
Sbjct: 340 YSKHGMAREVLELFKLMREENKVKPDSITYLAVLSGCSHGQLEDMGLEIFYNMVNGKDGI 399
Query: 467 EPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAK 526
EP I HY C+VDLLGRAGR + A I +MP A +W LL +C H +VE+G +
Sbjct: 400 EPDIGHYGCVVDLLGRAGRVEEAFDFIKKMPFVPTAAIWGSLLGSCRVHSDVEIGIIVGQ 459
Query: 527 NLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFV 586
LL L P + GNY++++NL+ SAG W++ R LM ++ +TKEPG S VE+D V F
Sbjct: 460 KLLELEPENAGNYVILSNLYASAGKWEDMRNIRDLMQEKAVTKEPGRSWVELDQIVHTFH 519
Query: 587 AGDRSHHLSVDIRKTLKELHIKLLEAGYIAEADIV 621
A D +H ++ +KEL IK E GY+ + V
Sbjct: 520 ASDHTHPRREEVANKVKELSIKFKEDGYVPDLSCV 554
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 114/403 (28%), Positives = 212/403 (52%), Gaps = 14/403 (3%)
Query: 20 SMLQTGVHGNSFTFP---LVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYS 76
++LQ + G F +L C + +I +G+RVH+H++K + +++T LI +Y+
Sbjct: 49 ALLQMAILGREVKFEGYDSILNECVSQRAIREGQRVHTHMIKTCYLPSVYLRTRLIVLYN 108
Query: 77 KCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTF 136
KC +R + DEMP R+VVSW ++ISA+S+ EA+ + EM E + TF
Sbjct: 109 KCDCLGDARGMFDEMP--QRNVVSWTAMISAYSQRGFAFEALNLFVEMLRSDTEPNHFTF 166
Query: 137 VSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIG 192
++++ C F G +H K + + + +S++ MYAK G++ +A +F +
Sbjct: 167 ATILTSCYGSLGFETGRQIHSIAIKRN-YESHMFVGSSLLDMYAKSGRICDAHGVFHCLP 225
Query: 193 ETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALS 252
E +V+ T II GY +G EA L Q++ + + V + +++ + + L
Sbjct: 226 ERDVVACTAIISGYAQMGLDEEALKLFRQLQIEGMNSNSVTYASVLTALSGLAALNHGKQ 285
Query: 253 MHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGY 312
+HS +L+SG + L N L+ MY+KCG++ ARR+FD++ E++ W +M+ GY++ G
Sbjct: 286 VHSHVLRSGQYSYVVLLNSLIDMYSKCGNVCYARRIFDSMPERTCISWNAMLVGYSKHGM 345
Query: 313 PSEAVNLFKRLL-KTSVRPNEATLATTLSACAELGSLSKGKEIEEYIV--LNGLESNRQV 369
E + LFK + + V+P+ T LS C+ G EI +V +G+E +
Sbjct: 346 AREVLELFKLMREENKVKPDSITYLAVLSGCSHGQLEDMGLEIFYNMVNGKDGIEPDIGH 405
Query: 370 QTSLIHMFSKCGRINKAKEVFERVP-DKDLAVWSAMINGYAIH 411
++ + + GR+ +A + +++P A+W +++ +H
Sbjct: 406 YGCVVDLLGRAGRVEEAFDFIKKMPFVPTAAIWGSLLGSCRVH 448
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 88/313 (28%), Positives = 158/313 (50%), Gaps = 14/313 (4%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI + G E L+ + ML++ N FTF +L +C G+++HS +K
Sbjct: 134 MISAYSQRGFAFEALNLFVEMLRSDTEPNHFTFATILTSCYGSLGFETGRQIHSIAIKRN 193
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
++ FV + L+DMY+K + V +P R VV+ +IIS +++ L++EA+ +
Sbjct: 194 YESHMFVGSSLLDMYAKSGRICDAHGVFHCLPE--RDVVACTAIISGYAQMGLDEEALKL 251
Query: 121 LKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
+++ + G+ ++ T+ SV++ S G +H V + G + + L NS++ MY+
Sbjct: 252 FRQLQIEGMNSNSVTYASVLTALSGLAALNHGKQVHSHVLRSGQYSY-VVLLNSLIDMYS 310
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMS-VTPDLVVFL 235
K G V AR IFD + E + +SW ++ GY G E L MR + V PD + +L
Sbjct: 311 KCGNVCYARRIFDSMPERTCISWNAMLVGYSKHGMAREVLELFKLMREENKVKPDSITYL 370
Query: 236 NLILGCA--QVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVL 293
++ GC+ Q+ ++ L + + + K G + +V + + G +E A FD +
Sbjct: 371 AVLSGCSHGQLEDMGLEIFYNMVNGKDGIEPDIGHYGCVVDLLGRAGRVEEA---FD-FI 426
Query: 294 EKSVFLWTSMIGG 306
+K F+ T+ I G
Sbjct: 427 KKMPFVPTAAIWG 439
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 76/287 (26%), Positives = 134/287 (46%), Gaps = 33/287 (11%)
Query: 12 EETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGL 71
EE L + + G++ NS T+ VL A + + ++ GK+VHSHVL+ G + L
Sbjct: 246 EEALKLFRQLQIEGMNSNSVTYASVLTALSGLAALNHGKQVHSHVLRSGQYSYVVLLNSL 305
Query: 72 IDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLG-LE 130
IDMYSKC + +R++ D MP R+ +SWN+++ +S+ + E + + K M ++
Sbjct: 306 IDMYSKCGNVCYARRIFDSMPE--RTCISWNAMLVGYSKHGMAREVLELFKLMREENKVK 363
Query: 131 LSASTFVSVVSGCSFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDE 190
+ T+++V+SGCS G L + M + + VN I +
Sbjct: 364 PDSITYLAVLSGCSH-------------GQLED--------MGLEIFYNMVNGKDGIEPD 402
Query: 191 IGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLA 250
IG V ++G G V EAF +++M P ++ +L+ C ++ +
Sbjct: 403 IGHYGCV--VDLLG---RAGRVEEAFDF---IKKMPFVPTAAIWGSLLGSCRVHSDVEIG 454
Query: 251 LSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSV 297
+ + LL+ N +L ++Y G E R + D + EK+V
Sbjct: 455 IIVGQKLLELEPENAGNY-VILSNLYASAGKWEDMRNIRDLMQEKAV 500
>gi|147860004|emb|CAN81045.1| hypothetical protein VITISV_006763 [Vitis vinifera]
Length = 1321
Score = 327 bits (839), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 177/583 (30%), Positives = 320/583 (54%), Gaps = 9/583 (1%)
Query: 37 LKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLR 96
L C + G+R H V+K+G D FV T LIDMY+KC + S+ +V D+M
Sbjct: 120 LSFCGREGCVELGRRWHCFVVKIGLGSDEFVCTSLIDMYAKCGEVDSAVRVYDKMTSL-- 177
Query: 97 SVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGC----SFRQGISMH 152
+ N +ISA++R +A V ++ +G + T+ ++++ C + ++G +H
Sbjct: 178 DAATCNCLISAYARNGFFVQAFQVFMQIGNMGTRPNHYTYSTMLAVCGTISAIQEGKQLH 237
Query: 153 CCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNV 212
V K+ L+ E + N+++++Y+K G + EA +F+ + + +I+SWT I G+ G+
Sbjct: 238 AHVVKMQYLS-ETAVGNALLTLYSKCGMMEEAEIVFESLRQRNIISWTASINGFYQHGDF 296
Query: 213 NEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLL 272
+A + MR + P+ F ++ C V + H+ ++K G + + +
Sbjct: 297 KKALKQFSMMRESGIEPNEFTFSIVLASCGCVKDFIDGRMFHTQVIKKGMASGVFVGTAI 356
Query: 273 VSMYTKCGDLELARRVFDAV-LEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPN 331
+ MY+ G+++ A + F + S W ++I GY +A+ F R++K V N
Sbjct: 357 IDMYSGLGEMDEAEKQFKQMGRAASNVSWNALIAGYVLNEKIEKAMEAFCRMVKEDVACN 416
Query: 332 EATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFE 391
E T + AC+ SL+ +I ++ + +ESN V +SLI +++CG + A +VF
Sbjct: 417 EFTYSNIFKACSSFPSLATTVQIHSRLIKSNVESNLHVASSLIEAYTQCGSLENAVQVFT 476
Query: 392 RVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVD 451
++ D D+ W+++I Y+ +G +A+ L KM EG KP + + ++LSACSHSG+V
Sbjct: 477 QISDADVVSWNSIIKAYSQNGDPWKAIFLLRKMIE-EGNKPTSXTFLTVLSACSHSGLVQ 535
Query: 452 DGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSA 511
+G FFKSM ++ I+P H C+VD+LGRAG+ + AL I ++ ++ A +W PLL+A
Sbjct: 536 EGQEFFKSMVQDYSIQPEETHCSCMVDILGRAGQLENALDFIKKLTMKPTASIWRPLLAA 595
Query: 512 CMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEP 571
C + N+++ EY A+ +L L P Y+ ++N++ G W +A R LM+ + ++KEP
Sbjct: 596 CRYNSNLQMAEYVAEKILDLEPNDATVYVTLSNMYAEVGRWADAENQRRLMEQKEISKEP 655
Query: 572 GWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKELHIKLLEAGY 614
G S +E++ + F + D++H + + LK+L ++ + GY
Sbjct: 656 GCSWIEVNNKMYKFFSHDKAHPEMPKVYEKLKQLVRQIQDIGY 698
Score = 311 bits (798), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 176/555 (31%), Positives = 297/555 (53%), Gaps = 39/555 (7%)
Query: 27 HGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRK 86
+S T+ + A +++ G+ +H+H++ +G + + L+ Y++C ++RK
Sbjct: 800 QSSSDTYAKAIDMYARDRALYRGRALHAHLVIIGLARLTYFAAKLMSFYTECGQLSNARK 859
Query: 87 VLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCSF- 145
+ D++P ++ W + A +R +EA+ EM GL + S++ C
Sbjct: 860 LFDKIPNT--NIRRWIVLTGACARRGFYEEALSAFSEMQKEGLRPNQFVLPSILKACGHL 917
Query: 146 ---RQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTI 202
R G +MH + K ++ + ++++ MY+K G V +A +FD I + +V +
Sbjct: 918 SDRRTGENMHTVILK-NSFESDAYIISALIYMYSKCGHVEKACRVFDWIVDKDLVVMNAM 976
Query: 203 IGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGY 262
+ GY G V+EA L +M++ V P++V + LI G +QVG+ + + L+ +G
Sbjct: 977 VSGYAQHGFVHEALBLVQKMQQAGVKPNVVSWNTLIAGFSQVGDKSMVSEVFRLMTANG- 1035
Query: 263 NNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKR 322
+E V WTS+I G+ Q + E + FK
Sbjct: 1036 ------------------------------VEPDVVSWTSVISGFVQNFHNHEGFDAFKE 1065
Query: 323 LLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGR 382
+L P+ T+++ L AC + +L GKEI Y ++ G+E + V+++L+ M++KCG
Sbjct: 1066 MLDQGFCPSSVTISSLLPACTNVANLRHGKEIHGYAMVIGVEKDVYVRSALVDMYAKCGY 1125
Query: 383 INKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILS 442
I++AK +F +P+++ W+++I GYA HG ++A+ LF +M+ + K D + +T++L+
Sbjct: 1126 ISEAKILFYMMPERNTVTWNSLIFGYANHGYCNEAIELFNQMEESD-TKLDHLTFTAVLN 1184
Query: 443 ACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQA 502
ACSH+GMV+ G S F MQ + IEP +EHY C+VDLLGRAG+ A I MPVE
Sbjct: 1185 ACSHAGMVELGESLFXKMQEKYRIEPRLEHYACMVDLLGRAGKLSEAYDLIKAMPVEPDK 1244
Query: 503 QVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLM 562
VW LL AC H N+EL E AA++L L P S G+ +L++NL+ AG W AA + +M
Sbjct: 1245 FVWGALLGACRNHGNIELAEVAAEHLFELEPESPGSSLLLSNLYADAGRWGNAAKMKKMM 1304
Query: 563 DDRRLTKEPGWSQVE 577
R+ K PG S +E
Sbjct: 1305 KQRKFGKFPGCSWIE 1319
Score = 168 bits (426), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 113/448 (25%), Positives = 220/448 (49%), Gaps = 14/448 (3%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+I NG F + + + G N +T+ +L C I++I +GK++H+HV+K+
Sbjct: 185 LISAYARNGFFVQAFQVFMQIGNMGTRPNHYTYSTMLAVCGTISAIQEGKQLHAHVVKMQ 244
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+ + V L+ +YSKC + V + + R R+++SW + I+ + +A+
Sbjct: 245 YLSETAVGNALLTLYSKCGMMEEAEIVFESL--RQRNIISWTASINGFYQHGDFKKALKQ 302
Query: 121 LKEMWVLGLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
M G+E + TF V++ C F G H V K G+ + + + +++ MY+
Sbjct: 303 FSMMRESGIEPNEFTFSIVLASCGCVKDFIDGRMFHTQVIKKGMASG-VFVGTAIIDMYS 361
Query: 177 KFGKVNEARSIFDEIGE-TSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFL 235
G+++EA F ++G S VSW +I GYV + +A +M + V + +
Sbjct: 362 GLGEMDEAEKQFKQMGRAASNVSWNALIAGYVLNEKIEKAMEAFCRMVKEDVACNEFTYS 421
Query: 236 NLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEK 295
N+ C+ +L + +HS L+KS + + + L+ YT+CG LE A +VF + +
Sbjct: 422 NIFKACSSFPSLATTVQIHSRLIKSNVESNLHVASSLIEAYTQCGSLENAVQVFTQISDA 481
Query: 296 SVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIE 355
V W S+I Y+Q G P +A+ L +++++ +P T T LSAC+ G + +G+E
Sbjct: 482 DVVSWNSIIKAYSQNGDPWKAIFLLRKMIEEGNKPTSXTFLTVLSACSHSGLVQEGQEFF 541
Query: 356 EYIVLN-GLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLA-VWSAMINGYAIHGM 413
+ +V + ++ + ++ + + G++ A + +++ K A +W ++ +
Sbjct: 542 KSMVQDYSIQPEETHCSCMVDILGRAGQLENALDFIKKLTMKPTASIWRPLLAACRYNSN 601
Query: 414 GDQALNLFYKMQHVEGLKP-DAVVYTSI 440
A Y + + L+P DA VY ++
Sbjct: 602 LQMAE---YVAEKILDLEPNDATVYVTL 626
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 108/410 (26%), Positives = 202/410 (49%), Gaps = 40/410 (9%)
Query: 9 GSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQ 68
G +EE LS +S M + G+ N F P +LKAC +++ G+ +H+ +LK F+ DA++
Sbjct: 883 GFYEEALSAFSEMQKEGLRPNQFVLPSILKACGHLSDRRTGENMHTVILKNSFESDAYII 942
Query: 69 TGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLG 128
+ LI MYSKC + +V D + + +V N+++S +++ EA+ ++++M G
Sbjct: 943 SALIYMYSKCGHVEKACRVFDW--IVDKDLVVMNAMVSGYAQHGFVHEALBLVQKMQQAG 1000
Query: 129 LELSASTFVSVVSGCSFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIF 188
++ + ++ ++++G S SM V++L AN V
Sbjct: 1001 VKPNVVSWNTLIAGFSQVGDKSMVSEVFRLM-------TANGV----------------- 1036
Query: 189 DEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLF 248
E +VSWT++I G+V + +E F +M P V +L+ C V NL
Sbjct: 1037 ----EPDVVSWTSVISGFVQNFHNHEGFDAFKEMLDQGFCPSSVTISSLLPACTNVANLR 1092
Query: 249 LALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYA 308
+H + G + + + LV MY KCG + A+ +F + E++ W S+I GYA
Sbjct: 1093 HGKEIHGYAMVIGVEKDVYVRSALVDMYAKCGYISEAKILFYMMPERNTVTWNSLIFGYA 1152
Query: 309 QLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEI-----EEYIVLNGL 363
GY +EA+ LF ++ ++ + + T L+AC+ G + G+ + E+Y + L
Sbjct: 1153 NHGYCNEAIELFNQMEESDTKLDHLTFTAVLNACSHAGMVELGESLFXKMQEKYRIEPRL 1212
Query: 364 ESNRQVQTSLIHMFSKCGRINKAKEVFERVP-DKDLAVWSAMINGYAIHG 412
E ++ + + G++++A ++ + +P + D VW A++ HG
Sbjct: 1213 EH----YACMVDLLGRAGKLSEAYDLIKAMPVEPDKFVWGALLGACRNHG 1258
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 85/344 (24%), Positives = 158/344 (45%), Gaps = 18/344 (5%)
Query: 7 NNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAF 66
+G F++ L +S M ++G+ N FTF +VL +C + DG+ H+ V+K G F
Sbjct: 292 QHGDFKKALKQFSMMRESGIEPNEFTFSIVLASCGCVKDFIDGRMFHTQVIKKGMASGVF 351
Query: 67 VQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWV 126
V T +IDMYS + + K +M R S VSWN++I+ + ++A+ M
Sbjct: 352 VGTAIIDMYSGLGEMDEAEKQFKQMG-RAASNVSWNALIAGYVLNEKIEKAMEAFCRMVK 410
Query: 127 LGLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVN 182
+ + T+ ++ C S + +H + K + +N + +A+S++ Y + G +
Sbjct: 411 EDVACNEFTYSNIFKACSSFPSLATTVQIHSRLIKSNVESN-LHVASSLIEAYTQCGSLE 469
Query: 183 EARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCA 242
A +F +I + +VSW +II Y G+ +A L +M P FL ++ C+
Sbjct: 470 NAVQVFTQISDADVVSWNSIIKAYSQNGDPWKAIFLLRKMIEEGNKPTSXTFLTVLSACS 529
Query: 243 -----QVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAV-LEKS 296
Q G F S++ E+ + +V + + G LE A + ++ +
Sbjct: 530 HSGLVQEGQEFF----KSMVQDYSIQPEETHCSCMVDILGRAGQLENALDFIKKLTMKPT 585
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLS 340
+W ++ A + +++L + PN+AT+ TLS
Sbjct: 586 ASIWRPLLAACRYNSNLQMAEYVAEKIL--DLEPNDATVYVTLS 627
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 73/269 (27%), Positives = 126/269 (46%), Gaps = 35/269 (13%)
Query: 13 ETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLI 72
E + ML G +S T +L AC N+ ++ GK +H + + +G ++D +V++ L+
Sbjct: 1058 EGFDAFKEMLDQGFCPSSVTISSLLPACTNVANLRHGKEIHGYAMVIGVEKDVYVRSALV 1117
Query: 73 DMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELS 132
DMY+KC ++S K+L M + R+ V+WNS+I ++ +EAI + +M +L
Sbjct: 1118 DMYAKCG-YISEAKILFYM-MPERNTVTWNSLIFGYANHGYCNEAIELFNQMEESDTKLD 1175
Query: 133 ASTFVSVVSGCSFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIG 192
TF +V++ CS H + +LG + F K+ E I
Sbjct: 1176 HLTFTAVLNACS-------HAGMVELG---------------ESLFXKMQEKYRI----- 1208
Query: 193 ETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALS 252
E + + ++ G ++EA+ L ++ M V PD V+ L+ C GN+ LA
Sbjct: 1209 EPRLEHYACMVDLLGRAGKLSEAYDL---IKAMPVEPDKFVWGALLGACRNHGNIELAEV 1265
Query: 253 MHSLLLKSGYNNEDPLDNLLVS-MYTKCG 280
L + E P +LL+S +Y G
Sbjct: 1266 AAEHLFE--LEPESPGSSLLLSNLYADAG 1292
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 69/124 (55%), Gaps = 1/124 (0%)
Query: 330 PNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEV 389
P+ + + LS C G + G+ ++V GL S+ V TSLI M++KCG ++ A V
Sbjct: 111 PHRQYVFSALSFCGREGCVELGRRWHCFVVKIGLGSDEFVCTSLIDMYAKCGEVDSAVRV 170
Query: 390 FERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGM 449
++++ D A + +I+ YA +G QA +F ++ ++ G +P+ Y+++L+ C
Sbjct: 171 YDKMTSLDAATCNCLISAYARNGFFVQAFQVFMQIGNM-GTRPNHYTYSTMLAVCGTISA 229
Query: 450 VDDG 453
+ +G
Sbjct: 230 IQEG 233
>gi|357453927|ref|XP_003597244.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355486292|gb|AES67495.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 678
Score = 327 bits (839), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 174/491 (35%), Positives = 279/491 (56%), Gaps = 6/491 (1%)
Query: 135 TFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDE 190
TF V+ C+ F G+ +H V+K G + ++ + +V+ Y+K G + +A +FD+
Sbjct: 106 TFSFVLKACARLNLFHLGVMIHSLVFKTGF-DCDVFVKTNVVCFYSKCGFLRDAWKVFDD 164
Query: 191 IGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLA 250
+ ++VSWT +I G + G EA L + + PD V + ++ CA++G+L
Sbjct: 165 MVVKNVVSWTGMICGCIEFGKFREAVDLFRGLLESGLRPDGFVIVRVLRACARLGDLESG 224
Query: 251 LSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQL 310
+ + + G + + LV MYTKCG +E AR VFD ++EK + W++MI GYA
Sbjct: 225 RWIDRCMRECGLSRNVFVATSLVDMYTKCGSMEEARFVFDGMVEKDIVCWSAMIQGYASN 284
Query: 311 GYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQ 370
G P EA+ LF + K +VRP+ + LS+CA LG+L G + + SN +
Sbjct: 285 GLPREAIELFFEMRKVNVRPDCYAMVGALSSCASLGALELGNWAKGLMNYEEFLSNPVLG 344
Query: 371 TSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGL 430
TSLI ++KCG + +A V++ + +KD V++A+I+G A++G A +F +M G+
Sbjct: 345 TSLIDFYAKCGSMEEALGVYKMMKEKDRVVFNAVISGLAMYGQVGAAFGVFGQMGKF-GI 403
Query: 431 KPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLAL 490
P+ + +L C+H+G+VDDG +F SM +F + P+IEHY C+VDLL RAG D A
Sbjct: 404 PPNEHTFVGLLCGCTHAGLVDDGRHYFNSMSHDFSVTPTIEHYGCMVDLLARAGFLDEAH 463
Query: 491 KTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSAG 550
I MP++ VW LL C H +L E+ K L+ L P ++G+Y+L++N+++++
Sbjct: 464 NLIKGMPMKANVIVWGSLLGGCRLHRETQLAEHVLKQLIELEPWNSGHYVLLSNIYSASR 523
Query: 551 MWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKELHIKLL 610
W EA R ++++ + K PG+S VE+DG V F+ GD SH LS I + L+ L L
Sbjct: 524 RWDEAEKIRSTVNEKGMQKLPGYSWVEVDGVVHEFLVGDTSHPLSQKIYEKLESLFKDLK 583
Query: 611 EAGYIAEADIV 621
EAGY + V
Sbjct: 584 EAGYNPTTEFV 594
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 125/422 (29%), Positives = 203/422 (48%), Gaps = 19/422 (4%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MIR + F + Y+SM + + +SFTF VLKACA +N G +HS V K G
Sbjct: 75 MIRGMVSKDRFNNAVHLYASMHKAAIVPDSFTFSFVLKACARLNLFHLGVMIHSLVFKTG 134
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F D FV+T ++ YSKC + KV D+M V ++VVSW +I EA+ +
Sbjct: 135 FDCDVFVKTNVVCFYSKCGFLRDAWKVFDDMVV--KNVVSWTGMICGCIEFGKFREAVDL 192
Query: 121 LKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
+ + GL V V+ C+ G + C+ + GL N + +A S++ MY
Sbjct: 193 FRGLLESGLRPDGFVIVRVLRACARLGDLESGRWIDRCMRECGLSRN-VFVATSLVDMYT 251
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K G + EAR +FD + E IV W+ +I GY + G EA L +MR+++V PD +
Sbjct: 252 KCGSMEEARFVFDGMVEKDIVCWSAMIQGYASNGLPREAIELFFEMRKVNVRPDCYAMVG 311
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
+ CA +G L L L+ + + L L+ Y KCG +E A V+ + EK
Sbjct: 312 ALSSCASLGALELGNWAKGLMNYEEFLSNPVLGTSLIDFYAKCGSMEEALGVYKMMKEKD 371
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEE 356
++ ++I G A G A +F ++ K + PNE T L C G + G+
Sbjct: 372 RVVFNAVISGLAMYGQVGAAFGVFGQMGKFGIPPNEHTFVGLLCGCTHAGLVDDGRH--- 428
Query: 357 YIVLNGLESNRQVQTSLIH------MFSKCGRINKAKEVFERVPDK-DLAVWSAMINGYA 409
N + + V ++ H + ++ G +++A + + +P K ++ VW +++ G
Sbjct: 429 --YFNSMSHDFSVTPTIEHYGCMVDLLARAGFLDEAHNLIKGMPMKANVIVWGSLLGGCR 486
Query: 410 IH 411
+H
Sbjct: 487 LH 488
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 119/373 (31%), Positives = 195/373 (52%), Gaps = 22/373 (5%)
Query: 199 WTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLL 258
+ T+I G V+ N A L M + ++ PD F ++ CA++ L + +HSL+
Sbjct: 72 YNTMIRGMVSKDRFNNAVHLYASMHKAAIVPDSFTFSFVLKACARLNLFHLGVMIHSLVF 131
Query: 259 KSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVN 318
K+G++ + + +V Y+KCG L A +VFD ++ K+V WT MI G + G EAV+
Sbjct: 132 KTGFDCDVFVKTNVVCFYSKCGFLRDAWKVFDDMVVKNVVSWTGMICGCIEFGKFREAVD 191
Query: 319 LFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFS 378
LF+ LL++ +RP+ + L ACA LG L G+ I+ + GL N V TSL+ M++
Sbjct: 192 LFRGLLESGLRPDGFVIVRVLRACARLGDLESGRWIDRCMRECGLSRNVFVATSLVDMYT 251
Query: 379 KCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYT 438
KCG + +A+ VF+ + +KD+ WSAMI GYA +G+ +A+ LF++M+ V ++PD
Sbjct: 252 KCGSMEEARFVFDGMVEKDIVCWSAMIQGYASNGLPREAIELFFEMRKVN-VRPDCYAMV 310
Query: 439 SILSACSHSGMVD-----DGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTI 493
LS+C+ G ++ GL ++ SN + S L+D + G + AL +
Sbjct: 311 GALSSCASLGALELGNWAKGLMNYEEFLSNPVLGTS------LIDFYAKCGSMEEAL-GV 363
Query: 494 HEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWK 553
++M E V+ ++S + V AA + G G + + N T G+
Sbjct: 364 YKMMKEKDRVVFNAVISGLAMYGQVG----AAFGVF----GQMGKFGIPPNEHTFVGLLC 415
Query: 554 EAATARGLMDDRR 566
T GL+DD R
Sbjct: 416 -GCTHAGLVDDGR 427
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 106/216 (49%), Gaps = 3/216 (1%)
Query: 296 SVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIE 355
+ FL+ +MI G + AV+L+ + K ++ P+ T + L ACA L G I
Sbjct: 68 NTFLYNTMIRGMVSKDRFNNAVHLYASMHKAAIVPDSFTFSFVLKACARLNLFHLGVMIH 127
Query: 356 EYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGD 415
+ G + + V+T+++ +SKCG + A +VF+ + K++ W+ MI G G
Sbjct: 128 SLVFKTGFDCDVFVKTNVVCFYSKCGFLRDAWKVFDDMVVKNVVSWTGMICGCIEFGKFR 187
Query: 416 QALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLC 475
+A++LF + GL+PD V +L AC+ G ++ G + M+ G+ ++
Sbjct: 188 EAVDLFRGLLE-SGLRPDGFVIVRVLRACARLGDLESGRWIDRCMREC-GLSRNVFVATS 245
Query: 476 LVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSA 511
LVD+ + G + A + + + VE W+ ++
Sbjct: 246 LVDMYTKCGSMEEA-RFVFDGMVEKDIVCWSAMIQG 280
>gi|15234095|ref|NP_195043.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206840|sp|Q9SMZ2.1|PP347_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g33170
gi|4455331|emb|CAB36791.1| putative protein [Arabidopsis thaliana]
gi|7270265|emb|CAB80034.1| putative protein [Arabidopsis thaliana]
gi|332660786|gb|AEE86186.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 990
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 187/619 (30%), Positives = 328/619 (52%), Gaps = 8/619 (1%)
Query: 7 NNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAF 66
++G + L ++ M+++ V + TF L+L ++S+ G++VH LK+G
Sbjct: 292 HSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLT 351
Query: 67 VQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWV 126
V LI+MY K F +R V D M R ++SWNS+I+ ++ L EA+ + ++
Sbjct: 352 VSNSLINMYCKLRKFGFARTVFDNMSER--DLISWNSVIAGIAQNGLEVEAVCLFMQLLR 409
Query: 127 LGLELSASTFVSVV-SGCSFRQGISMHCCVYKLGLLNNEIP---LANSVMSMYAKFGKVN 182
GL+ T SV+ + S +G+S+ V+ + N + ++ +++ Y++ +
Sbjct: 410 CGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMK 469
Query: 183 EARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCA 242
EA +F E +V+W ++ GY + ++ L M + D + C
Sbjct: 470 EAEILF-ERHNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCG 528
Query: 243 QVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTS 302
+ + +H+ +KSGY+ + + + ++ MY KCGD+ A+ FD++ WT+
Sbjct: 529 FLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTT 588
Query: 303 MIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNG 362
MI G + G A ++F ++ V P+E T+AT A + L +L +G++I +
Sbjct: 589 MISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLN 648
Query: 363 LESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFY 422
++ V TSL+ M++KCG I+ A +F+R+ ++ W+AM+ G A HG G + L LF
Sbjct: 649 CTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFK 708
Query: 423 KMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGR 482
+M+ + G+KPD V + +LSACSHSG+V + +SM ++GI+P IEHY CL D LGR
Sbjct: 709 QMKSL-GIKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHGDYGIKPEIEHYSCLADALGR 767
Query: 483 AGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILM 542
AG A I M +E A ++ LL+AC + E G+ A LL L P + Y+L+
Sbjct: 768 AGLVKQAENLIESMSMEASASMYRTLLAACRVQGDTETGKRVATKLLELEPLDSSAYVLL 827
Query: 543 ANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTL 602
+N++ +A W E AR +M ++ K+PG+S +E+ + +FV DRS+ + I + +
Sbjct: 828 SNMYAAASKWDEMKLARTMMKGHKVKKDPGFSWIEVKNKIHIFVVDDRSNRQTELIYRKV 887
Query: 603 KELHIKLLEAGYIAEADIV 621
K++ + + GY+ E D
Sbjct: 888 KDMIRDIKQEGYVPETDFT 906
Score = 145 bits (365), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 114/458 (24%), Positives = 204/458 (44%), Gaps = 43/458 (9%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANI-NSIWDGKRVHSHVLKV 59
+I NG E + + +L+ G+ + +T VLKA +++ + K+VH H +K+
Sbjct: 387 VIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKI 446
Query: 60 GFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAIL 119
D+FV T LID YS+ + + + L V+WN++++ ++++ + +
Sbjct: 447 NNVSDSFVSTALIDAYSRNRCMKEAEILFERHNFDL---VAWNAMMAGYTQSHDGHKTLK 503
Query: 120 VLKEMWVLGLELSASTFVSVVSGCSF----RQGISMHCCVYKLGLLNNEIPLANSVMSMY 175
+ M G T +V C F QG +H K G + ++ +++ ++ MY
Sbjct: 504 LFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSG-YDLDLWVSSGILDMY 562
Query: 176 AKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFL 235
K G ++ A+ FD I V+WTT+I G + G AF + +QMR M V PD
Sbjct: 563 VKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIA 622
Query: 236 NLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEK 295
L + + L +H+ LK N+ + LV MY KCG ++ A +F +
Sbjct: 623 TLAKASSCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMM 682
Query: 296 SVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIE 355
++ W +M+ G AQ G E + LFK++ ++P++ T LSAC+ G +S E
Sbjct: 683 NITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSACSHSGLVS-----E 737
Query: 356 EYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGD 415
Y + + + ++ + H +S + + G+
Sbjct: 738 AYKHMRSMHGDYGIKPEIEH-------------------------YSCLADALGRAGLVK 772
Query: 416 QALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDG 453
QA NL M ++ A +Y ++L+AC G + G
Sbjct: 773 QAENLIESM----SMEASASMYRTLLAACRVQGDTETG 806
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 127/507 (25%), Positives = 220/507 (43%), Gaps = 54/507 (10%)
Query: 23 QTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFV 82
Q V+ + T +LK C + +W + H + K+G D FV L+++Y K
Sbjct: 138 QDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKIGLDGDEFVAGALVNIYLKFGKVK 197
Query: 83 SSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSG 142
+ + +EMP R VV WN ++ A+ +EAI +LS++ S
Sbjct: 198 EGKVLFEEMPYR--DVVLWNLMLKAYLEMGFKEEAI-----------DLSSAFHSS---- 240
Query: 143 CSFRQGISMHCCVYKLGLLNNEIPLA--------NSVMSMYAKFGKVNEARSIFDEIGET 194
GL NEI L +S F N+A S+ +
Sbjct: 241 ----------------GLNPNEITLRLLARISGDDSDAGQVKSFANGNDASSV------S 278
Query: 195 SIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMH 254
I+ + Y++ G + M V D V F+ ++ +V +L L +H
Sbjct: 279 EIIFRNKGLSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVH 338
Query: 255 SLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPS 314
+ LK G + + N L++MY K AR VFD + E+ + W S+I G AQ G
Sbjct: 339 CMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEV 398
Query: 315 EAVNLFKRLLKTSVRPNEATLATTLSACAELGS-LSKGKEIEEYIVLNGLESNRQVQTSL 373
EAV LF +LL+ ++P++ T+ + L A + L LS K++ + + S+ V T+L
Sbjct: 399 EAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTAL 458
Query: 374 IHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPD 433
I +S+ + +A+ +FER + DL W+AM+ GY G + L LF M H +G + D
Sbjct: 459 IDAYSRNRCMKEAEILFER-HNFDLVAWNAMMAGYTQSHDGHKTLKLFALM-HKQGERSD 516
Query: 434 AVVYTSILSACSHSGMVDDGLSFFK-SMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKT 492
++ C ++ G +++S + ++ + ++D+ + G A
Sbjct: 517 DFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSS--GILDMYVKCGDMSAAQFA 574
Query: 493 IHEMPVEVQAQVWAPLLSACMKHHNVE 519
+PV W ++S C+++ E
Sbjct: 575 FDSIPVPDDV-AWTTMISGCIENGEEE 600
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 106/422 (25%), Positives = 195/422 (46%), Gaps = 48/422 (11%)
Query: 49 GKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAH 108
GK H+ +L + F+ LI MYSKC +R+V D+MP R +VSWNSI++A+
Sbjct: 58 GKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPD--RDLVSWNSILAAY 115
Query: 109 SRA--CLND---EAILVLKEMWVLGLELSASTFVSVVSGCSFRQGI----SMHCCVYKLG 159
+++ C+ + +A L+ + + + S T ++ C + S H K+G
Sbjct: 116 AQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKIG 175
Query: 160 LLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLC 219
L +E +A +++++Y KFGKV E + +F+E+ +V W ++ Y+ +G EA L
Sbjct: 176 LDGDEF-VAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLS 234
Query: 220 NQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKC 279
+ + P+ + LL + ++ D
Sbjct: 235 SAFHSSGLNPNEITL--------------------RLLARISGDDSDA------------ 262
Query: 280 GDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTL 339
G ++ DA + + Y G S + F ++++ V ++ T L
Sbjct: 263 GQVKSFANGNDASSVSEIIFRNKGLSEYLHSGQYSALLKCFADMVESDVECDQVTFILML 322
Query: 340 SACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLA 399
+ ++ SL+ G+++ + GL+ V SLI+M+ K + A+ VF+ + ++DL
Sbjct: 323 ATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLI 382
Query: 400 VWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKS 459
W+++I G A +G+ +A+ LF ++ GLKPD TS+L A S + +GLS K
Sbjct: 383 SWNSVIAGIAQNGLEVEAVCLFMQLLRC-GLKPDQYTMTSVLKAASS---LPEGLSLSKQ 438
Query: 460 MQ 461
+
Sbjct: 439 VH 440
Score = 122 bits (305), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 96/393 (24%), Positives = 178/393 (45%), Gaps = 45/393 (11%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
M+ T + +TL ++ M + G + FT V K C + +I GK+VH++ +K G
Sbjct: 488 MMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSG 547
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+ D +V +G++DMY KC D +++ D +PV V+W ++IS + A V
Sbjct: 548 YDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPV--PDDVAWTTMISGCIENGEEERAFHV 605
Query: 121 LKEMWVLGL---ELSASTFVSVVSGC--SFRQGISMHCCVYKLGLLNNEIPLANSVMSMY 175
+M ++G+ E + +T S C + QG +H KL N+ + S++ MY
Sbjct: 606 FSQMRLMGVLPDEFTIATLAK-ASSCLTALEQGRQIHANALKLNCTNDPF-VGTSLVDMY 663
Query: 176 AKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFL 235
AK G +++A +F I +I +W ++ G G E L QM+ + + PD V F+
Sbjct: 664 AKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFI 723
Query: 236 NLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEK 295
++ C+ HS L+ Y + + SM+ G ++
Sbjct: 724 GVLSACS-----------HSGLVSEAYKH-------MRSMHGDYG------------IKP 753
Query: 296 SVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIE 355
+ ++ + + G +A NL + + S+ + + T L+AC G GK +
Sbjct: 754 EIEHYSCLADALGRAGLVKQAENLIESM---SMEASASMYRTLLAACRVQGDTETGKRVA 810
Query: 356 EYIV-LNGLESNRQVQTSLIHMFSKCGRINKAK 387
++ L L+S+ V S +M++ + ++ K
Sbjct: 811 TKLLELEPLDSSAYVLLS--NMYAAASKWDEMK 841
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 101/196 (51%), Gaps = 6/196 (3%)
Query: 246 NLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIG 305
+L L H+ +L N E L N L+SMY+KCG L ARRVFD + ++ + W S++
Sbjct: 54 DLMLGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILA 113
Query: 306 GYAQ-----LGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVL 360
YAQ + +A LF+ L + V + TL+ L C G + + Y
Sbjct: 114 AYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACK 173
Query: 361 NGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNL 420
GL+ + V +L++++ K G++ + K +FE +P +D+ +W+ M+ Y G ++A++L
Sbjct: 174 IGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDL 233
Query: 421 FYKMQHVEGLKPDAVV 436
H GL P+ +
Sbjct: 234 SSAF-HSSGLNPNEIT 248
>gi|225444209|ref|XP_002270866.1| PREDICTED: pentatricopeptide repeat-containing protein At1g50270
[Vitis vinifera]
gi|296089231|emb|CBI39003.3| unnamed protein product [Vitis vinifera]
Length = 601
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 168/468 (35%), Positives = 283/468 (60%), Gaps = 3/468 (0%)
Query: 155 VYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNE 214
+ K GL + + + NS++S +A G V+ +R +F E + +VSWT +I G + G E
Sbjct: 129 IVKFGL-DFDAFVQNSLVSAFAHCGYVDCSRRLFIETAKKDVVSWTALINGCLRNGRAVE 187
Query: 215 AFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDP-LDNLLV 273
A +MR V D V ++++ A + +++ +H ++SG D + + LV
Sbjct: 188 ALECFVEMRSSGVEVDEVTVVSVLCAAAMLRDVWFGRWVHGFYVESGRVIWDVYVGSALV 247
Query: 274 SMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEA 333
MY+KCG + A +VF+ + +++ W ++I GY Q EA+ +F+ ++ + PN++
Sbjct: 248 DMYSKCGYCDDAVKVFNEMPTRNLVSWGALIAGYVQCNRYKEALKVFQEMIIEGIEPNQS 307
Query: 334 TLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERV 393
T+ + L+ACA+LGSL +G+ + EY+ + L N ++ T+L+ M+SKCG +++A VFE++
Sbjct: 308 TVTSALTACAQLGSLDQGRWLHEYVDRSKLGLNSKLGTALVDMYSKCGCVDEALLVFEKL 367
Query: 394 PDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDG 453
P KD+ W+AMING A+ G +LNLF +M ++P+ V + +LSAC+H G+VD+G
Sbjct: 368 PAKDVYPWTAMINGLAMRGDALSSLNLFSQMIRSR-VQPNGVTFLGVLSACAHGGLVDEG 426
Query: 454 LSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACM 513
L F+ M ++ +EP+++HY C+VDLLGRAGR + A+K I MP+E VW L S CM
Sbjct: 427 LELFRLMICDYRLEPNVDHYGCMVDLLGRAGRLEEAIKFIESMPMEPTPGVWGALFSGCM 486
Query: 514 KHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGW 573
H ELGE+ +L+ L P +G YIL+ANL++ W+ AA R LM + + K P
Sbjct: 487 IHKAFELGEHIGNHLIKLQPHHSGRYILLANLYSRCQKWEAAANVRRLMKGKGVDKSPAC 546
Query: 574 SQVEIDGSVQVFVAGDRSHHLSVDIRKTLKELHIKLLEAGYIAEADIV 621
S +E++G + F+A D+SH S+++ L + +L A Y +++++
Sbjct: 547 SWIEVNGVIHEFIAFDKSHIESINVYMMLGSVTAQLKLATYALDSNLL 594
Score = 186 bits (471), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 123/434 (28%), Positives = 221/434 (50%), Gaps = 12/434 (2%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
++R+ + + + L YS + GV + TFPL+LKA + + + + + ++H++K G
Sbjct: 75 IVRSFSASSQPQMVLVAYSRLRNHGVIPDRHTFPLLLKAFSKLRNE-NPFQFYAHIVKFG 133
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
DAFVQ L+ ++ C SR++ E + VVSW ++I+ R EA+
Sbjct: 134 LDFDAFVQNSLVSAFAHCGYVDCSRRLFIETAK--KDVVSWTALINGCLRNGRAVEALEC 191
Query: 121 LKEMWVLGLELSASTFVSVVSGCSFRQ----GISMHCCVYKLGLLNNEIPLANSVMSMYA 176
EM G+E+ T VSV+ + + G +H + G + ++ + ++++ MY+
Sbjct: 192 FVEMRSSGVEVDEVTVVSVLCAAAMLRDVWFGRWVHGFYVESGRVIWDVYVGSALVDMYS 251
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K G ++A +F+E+ ++VSW +I GYV EA + +M + P+ +
Sbjct: 252 KCGYCDDAVKVFNEMPTRNLVSWGALIAGYVQCNRYKEALKVFQEMIIEGIEPNQSTVTS 311
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
+ CAQ+G+L +H + +S L LV MY+KCG ++ A VF+ + K
Sbjct: 312 ALTACAQLGSLDQGRWLHEYVDRSKLGLNSKLGTALVDMYSKCGCVDEALLVFEKLPAKD 371
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEE 356
V+ WT+MI G A G ++NLF +++++ V+PN T LSACA G + +G E+
Sbjct: 372 VYPWTAMINGLAMRGDALSSLNLFSQMIRSRVQPNGVTFLGVLSACAHGGLVDEGLELFR 431
Query: 357 YIVLN-GLESNRQVQTSLIHMFSKCGRINKAKEVFERVP-DKDLAVWSAMINGYAIHG-- 412
++ + LE N ++ + + GR+ +A + E +P + VW A+ +G IH
Sbjct: 432 LMICDYRLEPNVDHYGCMVDLLGRAGRLEEAIKFIESMPMEPTPGVWGALFSGCMIHKAF 491
Query: 413 -MGDQALNLFYKMQ 425
+G+ N K+Q
Sbjct: 492 ELGEHIGNHLIKLQ 505
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 128/277 (46%), Gaps = 15/277 (5%)
Query: 229 PDLVVFLNLILGCAQVGNLFLALSMH-SLLLKSGYNNEDPLDNLLVSMYTKCGDLELARR 287
P L + IL C F L+ S+L+ SG + + L+ TK DL
Sbjct: 2 PKLATLRHSILCCFHKCGTFDHLNQTTSILITSGLAHHTFFLSDLLRSATK--DLGYTLL 59
Query: 288 VFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGS 347
+FD + +FLW +++ ++ P + + RL V P+ T L A ++L +
Sbjct: 60 LFDRLATPYIFLWNTIVRSFSASSQPQMVLVAYSRLRNHGVIPDRHTFPLLLKAFSKLRN 119
Query: 348 LSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMING 407
+ +IV GL+ + VQ SL+ F+ CG ++ ++ +F KD+ W+A+ING
Sbjct: 120 -ENPFQFYAHIVKFGLDFDAFVQNSLVSAFAHCGYVDCSRRLFIETAKKDVVSWTALING 178
Query: 408 YAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIE 467
+G +AL F +M+ G++ D V S+L A + M+ D +F F +E
Sbjct: 179 CLRNGRAVEALECFVEMRS-SGVEVDEVTVVSVLCA---AAMLRD--VWFGRWVHGFYVE 232
Query: 468 PS---IEHYL--CLVDLLGRAGRFDLALKTIHEMPVE 499
+ Y+ LVD+ + G D A+K +EMP
Sbjct: 233 SGRVIWDVYVGSALVDMYSKCGYCDDAVKVFNEMPTR 269
>gi|224085073|ref|XP_002307479.1| predicted protein [Populus trichocarpa]
gi|222856928|gb|EEE94475.1| predicted protein [Populus trichocarpa]
Length = 1026
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 197/627 (31%), Positives = 329/627 (52%), Gaps = 12/627 (1%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
M+ NG E + + +M G + + FT+ +L ACA + + G ++HS ++K
Sbjct: 399 MLGGYVQNGYANEVMELFFNMKSCGFYPDDFTYSSILSACACLKYLDLGHQLHSVIIKNK 458
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F + FV L+DMY+K +R+ + +R R VSWN II + + EA +
Sbjct: 459 FASNLFVGNALVDMYAKSGALEDARQQFE--LIRNRDNVSWNVIIVGYVQEEDEVEAFHL 516
Query: 121 LKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
+ M +LG+ + S++S C+ QG +HC K G ++ +S++ MYA
Sbjct: 517 FRRMNLLGILPDEVSLASILSACASVRGLEQGKQVHCLSVKTGQ-ETKLYSGSSLIDMYA 575
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K G ++ A I + E S+VS +I GY + N+ +A L M + + F +
Sbjct: 576 KCGAIDSAHKILACMPERSVVSMNALIAGYAQI-NLEQAVNLFRDMLVEGINSTEITFAS 634
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNL-LVSMYTKCGDLELARRVFDAVLE- 294
L+ C + L L +HSL+LK G +D + L+ MY A +F
Sbjct: 635 LLDACHEQQKLNLGRQIHSLILKMGLQLDDEFLGVSLLGMYMNSLRTTDASVLFSEFSNP 694
Query: 295 KSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEI 354
KS +WT+MI G +Q A+ L+K + +V P++AT + L ACA + S+ G E
Sbjct: 695 KSAVVWTAMISGLSQNDCSVVALQLYKEMRSCNVLPDQATFVSALRACAVVSSIKDGTET 754
Query: 355 EEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVP-DKDLAVWSAMINGYAIHGM 413
I G +S+ ++L+ M++KCG + + +VF+ + KD+ W++MI G+A +G
Sbjct: 755 HSLIFHTGFDSDELTSSALVDMYAKCGDVKSSMQVFKEMSRKKDVISWNSMIVGFAKNGY 814
Query: 414 GDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHY 473
+ AL +F +M+ + PD V + +L+ACSHSG V +G F M + +G++P +H
Sbjct: 815 AEDALRVFDEMKQSH-VTPDDVTFLGVLTACSHSGRVSEGRLIFDMMVNLYGMQPRADHC 873
Query: 474 LCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNP 533
C+VDLLGR G A + I+++ E A+VWA +L AC H + G+ AA+ L+ L P
Sbjct: 874 ACMVDLLGRWGSLKEAEEFINKLNFEPDAKVWATMLGACRIHGDDIRGQQAAEKLIELEP 933
Query: 534 GSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHH 593
++ Y+L++N++ ++G W E T R M ++ + K PG S + + +FVAGD+SHH
Sbjct: 934 QNSSPYVLLSNIYAASGNWDEVNTLRREMREKGVKKLPGCSWIVVGQETNMFVAGDKSHH 993
Query: 594 LSVDIRKTLKELHIKLLEAGYIAEADI 620
+ +I LK+L + E Y+ + D
Sbjct: 994 SASEIDAILKDLTPLMRENDYVVQLDF 1020
Score = 226 bits (577), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 145/488 (29%), Positives = 242/488 (49%), Gaps = 37/488 (7%)
Query: 11 FEETLSTYSSML-QTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQT 69
F + Y +L +GV N FTF +VL +CA + + G++VH +V+K+GF+ ++ +
Sbjct: 140 FPHLVVKYFGLLWNSGVWPNEFTFAIVLSSCARLEMVKCGRQVHCNVVKMGFESISYCEG 199
Query: 70 GLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGL 129
LI MY+KC+ +R + D V L VSW S+I + + L +EA+ V +EM +G
Sbjct: 200 ALIGMYAKCNFLTDARSIFDG-AVELDK-VSWTSMIGGYIKVGLPEEAVKVFQEMEKVGQ 257
Query: 130 ELSASTFVSVVSGCSFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFD 189
E FV+V++ Y G+++ A +F
Sbjct: 258 EPDQVAFVTVINA--------------------------------YVDLGRLDNASDLFS 285
Query: 190 EIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFL 249
+ ++V+W +I G+ G EA MR+ + +++ A + L
Sbjct: 286 RMPNRNVVAWNLMISGHAKGGYGVEAIEFFQNMRKAGIKSTRSTLGSVLSAIASLAALDF 345
Query: 250 ALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQ 309
L +H+ LK G ++ + + LVSMY KCG +E A++VFD + E++V LW +M+GGY Q
Sbjct: 346 GLLVHAEALKQGLHSNVYVGSSLVSMYAKCGKMEAAKKVFDTLNEQNVVLWNAMLGGYVQ 405
Query: 310 LGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQV 369
GY +E + LF + P++ T ++ LSACA L L G ++ I+ N SN V
Sbjct: 406 NGYANEVMELFFNMKSCGFYPDDFTYSSILSACACLKYLDLGHQLHSVIIKNKFASNLFV 465
Query: 370 QTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEG 429
+L+ M++K G + A++ FE + ++D W+ +I GY +A +LF +M ++ G
Sbjct: 466 GNALVDMYAKSGALEDARQQFELIRNRDNVSWNVIIVGYVQEEDEVEAFHLFRRM-NLLG 524
Query: 430 LKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLA 489
+ PD V SILSAC+ ++ G + G E + L+D+ + G D A
Sbjct: 525 ILPDEVSLASILSACASVRGLEQGKQ-VHCLSVKTGQETKLYSGSSLIDMYAKCGAIDSA 583
Query: 490 LKTIHEMP 497
K + MP
Sbjct: 584 HKILACMP 591
Score = 207 bits (528), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 130/398 (32%), Positives = 215/398 (54%), Gaps = 9/398 (2%)
Query: 51 RVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSR 110
+V + KVG + D +I+ Y ++ + MP R +VV+WN +IS H++
Sbjct: 247 KVFQEMEKVGQEPDQVAFVTVINAYVDLGRLDNASDLFSRMPNR--NVVAWNLMISGHAK 304
Query: 111 ACLNDEAILVLKEMWVLGLELSASTFVSVVSG----CSFRQGISMHCCVYKLGLLNNEIP 166
EAI + M G++ + ST SV+S + G+ +H K GL +N +
Sbjct: 305 GGYGVEAIEFFQNMRKAGIKSTRSTLGSVLSAIASLAALDFGLLVHAEALKQGLHSN-VY 363
Query: 167 LANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMS 226
+ +S++SMYAK GK+ A+ +FD + E ++V W ++GGYV G NE L M+
Sbjct: 364 VGSSLVSMYAKCGKMEAAKKVFDTLNEQNVVLWNAMLGGYVQNGYANEVMELFFNMKSCG 423
Query: 227 VTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELAR 286
PD + +++ CA + L L +HS+++K+ + + + N LV MY K G LE AR
Sbjct: 424 FYPDDFTYSSILSACACLKYLDLGHQLHSVIIKNKFASNLFVGNALVDMYAKSGALEDAR 483
Query: 287 RVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELG 346
+ F+ + + W +I GY Q EA +LF+R+ + P+E +LA+ LSACA +
Sbjct: 484 QQFELIRNRDNVSWNVIIVGYVQEEDEVEAFHLFRRMNLLGILPDEVSLASILSACASVR 543
Query: 347 SLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMIN 406
L +GK++ V G E+ +SLI M++KCG I+ A ++ +P++ + +A+I
Sbjct: 544 GLEQGKQVHCLSVKTGQETKLYSGSSLIDMYAKCGAIDSAHKILACMPERSVVSMNALIA 603
Query: 407 GYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSAC 444
GYA + +QA+NLF M VEG+ + + S+L AC
Sbjct: 604 GYAQINL-EQAVNLFRDML-VEGINSTEITFASLLDAC 639
Score = 204 bits (520), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 122/408 (29%), Positives = 208/408 (50%), Gaps = 43/408 (10%)
Query: 50 KRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHS 109
K +H+ LK+GF + ++D+Y+KC+D + + ++ + +++WNSI+S HS
Sbjct: 79 KIIHAQSLKLGFWSKGVLGNVIVDLYAKCADVDYAERAFKQL--EDKDILAWNSILSMHS 136
Query: 110 RACLNDEAILVLKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEI 165
+ + +W G+ + TF V+S C+ + G +HC V K+G +
Sbjct: 137 KQGFPHLVVKYFGLLWNSGVWPNEFTFAIVLSSCARLEMVKCGRQVHCNVVKMGFESISY 196
Query: 166 PLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRM 225
+++ MYAK + +ARSIFD E VSWT++IGGY+ VG EA + +M ++
Sbjct: 197 -CEGALIGMYAKCNFLTDARSIFDGAVELDKVSWTSMIGGYIKVGLPEEAVKVFQEMEKV 255
Query: 226 SVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELA 285
PD V F+ +I + Y G L+ A
Sbjct: 256 GQEPDQVAFVTVI-----------------------------------NAYVDLGRLDNA 280
Query: 286 RRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAEL 345
+F + ++V W MI G+A+ GY EA+ F+ + K ++ +TL + LSA A L
Sbjct: 281 SDLFSRMPNRNVVAWNLMISGHAKGGYGVEAIEFFQNMRKAGIKSTRSTLGSVLSAIASL 340
Query: 346 GSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMI 405
+L G + + GL SN V +SL+ M++KCG++ AK+VF+ + ++++ +W+AM+
Sbjct: 341 AALDFGLLVHAEALKQGLHSNVYVGSSLVSMYAKCGKMEAAKKVFDTLNEQNVVLWNAML 400
Query: 406 NGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDG 453
GY +G ++ + LF+ M+ G PD Y+SILSAC+ +D G
Sbjct: 401 GGYVQNGYANEVMELFFNMKSC-GFYPDDFTYSSILSACACLKYLDLG 447
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 146/525 (27%), Positives = 252/525 (48%), Gaps = 12/525 (2%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI G E + + +M + G+ T VL A A++ ++ G VH+ LK G
Sbjct: 298 MISGHAKGGYGVEAIEFFQNMRKAGIKSTRSTLGSVLSAIASLAALDFGLLVHAEALKQG 357
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+ +V + L+ MY+KC +++KV D + ++VV WN+++ + + +E + +
Sbjct: 358 LHSNVYVGSSLVSMYAKCGKMEAAKKVFDTL--NEQNVVLWNAMLGGYVQNGYANEVMEL 415
Query: 121 LKEMWVLGLELSASTFVSVVSGCSFRQ----GISMHCCVYKLGLLNNEIPLANSVMSMYA 176
M G T+ S++S C+ + G +H + K +N + + N+++ MYA
Sbjct: 416 FFNMKSCGFYPDDFTYSSILSACACLKYLDLGHQLHSVIIKNKFASN-LFVGNALVDMYA 474
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K G + +AR F+ I VSW II GYV + EAF L +M + + PD V +
Sbjct: 475 KSGALEDARQQFELIRNRDNVSWNVIIVGYVQEEDEVEAFHLFRRMNLLGILPDEVSLAS 534
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
++ CA V L +H L +K+G + + L+ MY KCG ++ A ++ + E+S
Sbjct: 535 ILSACASVRGLEQGKQVHCLSVKTGQETKLYSGSSLIDMYAKCGAIDSAHKILACMPERS 594
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEE 356
V ++I GYAQ+ +AVNLF+ +L + E T A+ L AC E L+ G++I
Sbjct: 595 VVSMNALIAGYAQINL-EQAVNLFRDMLVEGINSTEITFASLLDACHEQQKLNLGRQIHS 653
Query: 357 YIVLNGLESNRQ-VQTSLIHMFSKCGRINKAKEVFERVPD-KDLAVWSAMINGYAIHGMG 414
I+ GL+ + + + SL+ M+ R A +F + K VW+AMI+G + +
Sbjct: 654 LILKMGLQLDDEFLGVSLLGMYMNSLRTTDASVLFSEFSNPKSAVVWTAMISGLSQNDCS 713
Query: 415 DQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYL 474
AL L+ +M+ L PD + S L AC+ + DG S+ + G +
Sbjct: 714 VVALQLYKEMRSCNVL-PDQATFVSALRACAVVSSIKDGTE-THSLIFHTGFDSDELTSS 771
Query: 475 CLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVE 519
LVD+ + G +++ EM + W ++ K+ E
Sbjct: 772 ALVDMYAKCGDVKSSMQVFKEMSRKKDVISWNSMIVGFAKNGYAE 816
Score = 129 bits (325), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 117/208 (56%), Gaps = 1/208 (0%)
Query: 253 MHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGY 312
+H+ LK G+ ++ L N++V +Y KC D++ A R F + +K + W S++ +++ G+
Sbjct: 81 IHAQSLKLGFWSKGVLGNVIVDLYAKCADVDYAERAFKQLEDKDILAWNSILSMHSKQGF 140
Query: 313 PSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTS 372
P V F L + V PNE T A LS+CA L + G+++ +V G ES + +
Sbjct: 141 PHLVVKYFGLLWNSGVWPNEFTFAIVLSSCARLEMVKCGRQVHCNVVKMGFESISYCEGA 200
Query: 373 LIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKP 432
LI M++KC + A+ +F+ + D W++MI GY G+ ++A+ +F +M+ V G +P
Sbjct: 201 LIGMYAKCNFLTDARSIFDGAVELDKVSWTSMIGGYIKVGLPEEAVKVFQEMEKV-GQEP 259
Query: 433 DAVVYTSILSACSHSGMVDDGLSFFKSM 460
D V + ++++A G +D+ F M
Sbjct: 260 DQVAFVTVINAYVDLGRLDNASDLFSRM 287
>gi|147780607|emb|CAN69113.1| hypothetical protein VITISV_031840 [Vitis vinifera]
Length = 714
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 163/456 (35%), Positives = 277/456 (60%), Gaps = 2/456 (0%)
Query: 167 LANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMS 226
+ + ++SMY K G +A+ +FDE+ +VSW +++ G G + +MR S
Sbjct: 176 IGDRLVSMYFKLGYDEDAQRLFDEMPNRDLVSWNSLMSGLSGRGYLGACLNAFCRMRTES 235
Query: 227 -VTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELA 285
P+ V L+++ CA +G L S+H +++K G + + + N L++MY K G L+ A
Sbjct: 236 GRQPNEVTLLSVVSACAXMGALDEGKSLHGVVVKLGMSGKAKVVNSLINMYGKLGFLDAA 295
Query: 286 RRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAEL 345
++F+ + +S+ W SM+ + GY + ++LF + + + P++AT+ L AC +
Sbjct: 296 SQLFEEMPVRSLVSWNSMVVIHNHNGYAEKGMDLFNLMKRAGINPDQATMVALLRACTDT 355
Query: 346 GSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMI 405
G + + I YI G ++ + T+L+++++K GR+N ++++FE + D+D W+AM+
Sbjct: 356 GLGRQAESIHAYIHRCGFNADIIIATALLNLYAKLGRLNASEDIFEEIKDRDTIAWTAML 415
Query: 406 NGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFG 465
GYA+H G +A+ LF M EG++ D V +T +LSACSHSG+V++G +F+ M +
Sbjct: 416 AGYAVHACGREAIKLFDLMVK-EGVEVDHVTFTHLLSACSHSGLVEEGKKYFEIMSEVYR 474
Query: 466 IEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAA 525
+EP ++HY C+VDLLGR+GR + A + I MP+E + VW LL AC + NVELG+ A
Sbjct: 475 VEPRLDHYSCMVDLLGRSGRLEDAYELIKSMPMEPSSGVWGALLGACRVYGNVELGKEVA 534
Query: 526 KNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVF 585
+ LL+L+P NYI+++N++++AG+W+ A+ R LM +RRLT+ PG S +E + F
Sbjct: 535 EQLLSLDPSDHRNYIMLSNIYSAAGLWRXASKVRXLMKERRLTRNPGCSFIEHGNKIHRF 594
Query: 586 VAGDRSHHLSVDIRKTLKELHIKLLEAGYIAEADIV 621
V GD+ H S +I L+EL K+ EAG + + V
Sbjct: 595 VVGDQLHPRSDEIHTKLEELIRKIXEAGCAPKTEFV 630
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 112/420 (26%), Positives = 209/420 (49%), Gaps = 19/420 (4%)
Query: 4 NSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQ 63
NS+N+ + + + + + +S LV A ++ S+ +H+ V+K
Sbjct: 114 NSSNDSTRTKVAVFLGKLHNSSLLADSIVQSLVF-AISSCTSVSYCSAIHARVIKSLNYS 172
Query: 64 DAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHS-----RACLNDEAI 118
D F+ L+ MY K ++++ DEMP R +VSWNS++S S ACLN
Sbjct: 173 DGFIGDRLVSMYFKLGYDEDAQRLFDEMPN--RDLVSWNSLMSGLSGRGYLGACLNAFCR 230
Query: 119 LVLKEMWVLGLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSM 174
+ + G + + T +SVVS C + +G S+H V KLG ++ + + NS+++M
Sbjct: 231 MRTES----GRQPNEVTLLSVVSACAXMGALDEGKSLHGVVVKLG-MSGKAKVVNSLINM 285
Query: 175 YAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVF 234
Y K G ++ A +F+E+ S+VSW +++ + + G + L N M+R + PD
Sbjct: 286 YGKLGFLDAASQLFEEMPVRSLVSWNSMVVIHNHNGYAEKGMDLFNLMKRAGINPDQATM 345
Query: 235 LNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLE 294
+ L+ C G A S+H+ + + G+N + + L+++Y K G L + +F+ + +
Sbjct: 346 VALLRACTDTGLGRQAESIHAYIHRCGFNADIIIATALLNLYAKLGRLNASEDIFEEIKD 405
Query: 295 KSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEI 354
+ WT+M+ GYA EA+ LF ++K V + T LSAC+ G + +GK+
Sbjct: 406 RDTIAWTAMLAGYAVHACGREAIKLFDLMVKEGVEVDHVTFTHLLSACSHSGLVEEGKKY 465
Query: 355 EEYIV-LNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVP-DKDLAVWSAMINGYAIHG 412
E + + +E + ++ + + GR+ A E+ + +P + VW A++ ++G
Sbjct: 466 FEIMSEVYRVEPRLDHYSCMVDLLGRSGRLEDAYELIKSMPMEPSSGVWGALLGACRVYG 525
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 84/166 (50%), Gaps = 4/166 (2%)
Query: 334 TLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERV 393
+L +S+C S+S I ++ + S+ + L+ M+ K G A+ +F+ +
Sbjct: 144 SLVFAISSCT---SVSYCSAIHARVIKSLNYSDGFIGDRLVSMYFKLGYDEDAQRLFDEM 200
Query: 394 PDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDG 453
P++DL W+++++G + G LN F +M+ G +P+ V S++SAC+ G +D+G
Sbjct: 201 PNRDLVSWNSLMSGLSGRGYLGACLNAFCRMRTESGRQPNEVTLLSVVSACAXMGALDEG 260
Query: 454 LSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVE 499
S + G+ + L+++ G+ G D A + EMPV
Sbjct: 261 KS-LHGVVVKLGMSGKAKVVNSLINMYGKLGFLDAASQLFEEMPVR 305
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/234 (19%), Positives = 110/234 (47%), Gaps = 9/234 (3%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
M+ +NG E+ + ++ M + G++ + T +L+AC + + +H+++ + G
Sbjct: 313 MVVIHNHNGYAEKGMDLFNLMKRAGINPDQATMVALLRACTDTGLGRQAESIHAYIHRCG 372
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F D + T L+++Y+K +S + +E ++ R ++W ++++ ++ EAI +
Sbjct: 373 FNADIIIATALLNLYAKLGRLNASEDIFEE--IKDRDTIAWTAMLAGYAVHACGREAIKL 430
Query: 121 LKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
M G+E+ TF ++S CS +G + ++ + + + ++ +
Sbjct: 431 FDLMVKEGVEVDHVTFTHLLSACSHSGLVEEGKKYFEIMSEVYRVEPRLDHYSCMVDLLG 490
Query: 177 KFGKVNEARSIFDEIG-ETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTP 229
+ G++ +A + + E S W ++G GNV + Q+ +S+ P
Sbjct: 491 RSGRLEDAYELIKSMPMEPSSGVWGALLGACRVYGNVELGKEVAEQL--LSLDP 542
>gi|357167019|ref|XP_003580964.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Brachypodium distachyon]
Length = 861
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 197/627 (31%), Positives = 326/627 (51%), Gaps = 34/627 (5%)
Query: 29 NSFTFPLVLKACANINSIWD--GKRVHSHVLKVGF---QQDAFVQTGLIDMYSKCSDFVS 83
+SFT VL AC+++ G+ H+ LK GF ++ F L+ MY++
Sbjct: 151 SSFTLVSVLLACSHLADQGHRLGREAHAFALKHGFLDKGRERFPFNALLSMYARLGLVDD 210
Query: 84 SRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGC 143
++++ + +V+WN++IS + +EA+ VL +M LG+ TF S + C
Sbjct: 211 AQRLFFSSGAGVGDLVTWNTMISLLVQGGRCEEAVQVLYDMVALGVRPDGVTFASALPAC 270
Query: 144 SFRQ----GISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGE--TSIV 197
S + G +H V K L +A++++ MYA +V+ AR +FD + E +
Sbjct: 271 SRLELLGVGREVHAFVLKDDDLAANSFVASALVDMYASNEQVSHARRVFDMVPEHGRQLG 330
Query: 198 SWTTIIGGYVNVGNVNE-AFGLCNQMR-RMSVTPDLVVFLNLILGCAQVGNLFLALSMHS 255
W +I GY G ++E A L ++M P ++ CA+ ++H
Sbjct: 331 MWNAMICGYAQHGGMDEEAIELFSRMEAEAGCAPSETTMAGVLPACARSEVFTGKEAVHG 390
Query: 256 LLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSE 315
++K + + N L+ MY + G ++ A +F + + + W ++I G G SE
Sbjct: 391 YVVKRDMASNRFVQNALMDMYARLGRMDEAHTIFAMIDLRDIVSWNTLITGCIVQGLISE 450
Query: 316 AVNLFKRLL---------------KTSVR-----PNEATLATTLSACAELGSLSKGKEIE 355
A L + + TSV PN TL T L CA L + ++GKEI
Sbjct: 451 AFQLVREMQLPSSAASGETMLEGDDTSVDGQRCMPNNITLMTLLPGCAVLAAPARGKEIH 510
Query: 356 EYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGD 415
Y V + LES+ V ++L+ M++KCG + A+ VF+R+P +++ W+ +I Y +HG+GD
Sbjct: 511 GYAVRHALESDLAVGSALVDMYAKCGCLALARAVFDRLPRRNVITWNVLIMAYGMHGLGD 570
Query: 416 QALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLC 475
+AL LF +M P+ V + + L+ACSHSG+VD GL F+ M+ ++G EP+ + C
Sbjct: 571 EALALFDRMVANGEATPNEVTFIAALAACSHSGLVDRGLELFQGMKRDYGFEPTPYLHAC 630
Query: 476 LVDLLGRAGRFDLALKTIHEM-PVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPG 534
+VD+LGRAGR D A I M P E Q W+ +L AC H NV+LG AA+ L L P
Sbjct: 631 VVDVLGRAGRLDEAYGIISSMAPGEHQVSAWSTMLGACRLHRNVKLGRIAAERLFELEPD 690
Query: 535 STGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHL 594
+Y+L+ N++++AG+W+ + RG+M R + KEPG S +E+DG++ F+AG+ +H
Sbjct: 691 EASHYVLLCNIYSAAGLWENSTEVRGMMRQRGVAKEPGCSWIELDGAIHRFMAGESAHPE 750
Query: 595 SVDIRKTLKELHIKLLEAGYIAEADIV 621
S + + L ++ GY+ + V
Sbjct: 751 SAQVHAHMDALWERMRREGYVPDTSCV 777
Score = 181 bits (459), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 142/540 (26%), Positives = 248/540 (45%), Gaps = 48/540 (8%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLK-V 59
MI G EE + M+ GV + TF L AC+ + + G+ VH+ VLK
Sbjct: 231 MISLLVQGGRCEEAVQVLYDMVALGVRPDGVTFASALPACSRLELLGVGREVHAFVLKDD 290
Query: 60 GFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSR-ACLNDEAI 118
++FV + L+DMY+ +R+V D +P R + WN++I +++ +++EAI
Sbjct: 291 DLAANSFVASALVDMYASNEQVSHARRVFDMVPEHGRQLGMWNAMICGYAQHGGMDEEAI 350
Query: 119 LVLKEMWV-LGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMS 173
+ M G S +T V+ C+ F ++H V K + +N + N++M
Sbjct: 351 ELFSRMEAEAGCAPSETTMAGVLPACARSEVFTGKEAVHGYVVKRDMASNRF-VQNALMD 409
Query: 174 MYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMS------- 226
MYA+ G+++EA +IF I IVSW T+I G + G ++EAF L +M+ S
Sbjct: 410 MYARLGRMDEAHTIFAMIDLRDIVSWNTLITGCIVQGLISEAFQLVREMQLPSSAASGET 469
Query: 227 -------------VTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLV 273
P+ + + L+ GCA + +H ++ ++ + + LV
Sbjct: 470 MLEGDDTSVDGQRCMPNNITLMTLLPGCAVLAAPARGKEIHGYAVRHALESDLAVGSALV 529
Query: 274 SMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKT-SVRPNE 332
MY KCG L LAR VFD + ++V W +I Y G EA+ LF R++ PNE
Sbjct: 530 DMYAKCGCLALARAVFDRLPRRNVITWNVLIMAYGMHGLGDEALALFDRMVANGEATPNE 589
Query: 333 ATLATTLSACAELGSLSKGKEIEEYIVLN-GLESNRQVQTSLIHMFSKCGRINKAKEVFE 391
T L+AC+ G + +G E+ + + + G E + ++ + + GR+++A +
Sbjct: 590 VTFIAALAACSHSGLVDRGLELFQGMKRDYGFEPTPYLHACVVDVLGRAGRLDEAYGIIS 649
Query: 392 RVP--DKDLAVWSAMINGYAIH---GMGDQALNLFYKMQHVEGLKPD-AVVYTSILSACS 445
+ + ++ WS M+ +H +G A ++ L+PD A Y + + S
Sbjct: 650 SMAPGEHQVSAWSTMLGACRLHRNVKLGRIAAERLFE------LEPDEASHYVLLCNIYS 703
Query: 446 HSGMVDDGLSFFKSM-QSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQV 504
+G+ ++ M Q EP ++L G RF +A ++ H +V A +
Sbjct: 704 AAGLWENSTEVRGMMRQRGVAKEPGCS----WIELDGAIHRF-MAGESAHPESAQVHAHM 758
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 142/518 (27%), Positives = 240/518 (46%), Gaps = 64/518 (12%)
Query: 29 NSFTFPLVLKACANINSIWDGKRVHSHVLKVGF--QQDAFVQTGLIDMYSKCSDFVSSRK 86
+ F P +K+ A + + +H L+ + V L+ Y++C D ++
Sbjct: 47 DHFALPPAIKSAAALRDSRSTRAIHGASLRRALLHRPTPAVSNALLTAYARCGDLDAALA 106
Query: 87 VLDEMPVRLRSVVSWNSIISAHSRACLNDE---AILVLKEMWVLGLELSASTFVSVVSGC 143
+ P LR VS+NS+ISA CL A+ L++M + E+S+ T VSV+ C
Sbjct: 107 LFAATPPDLRDAVSYNSLISA---LCLFRRWGHALDALRDM-LADHEVSSFTLVSVLLAC 162
Query: 144 S------FRQGISMHCCVYKLGLLNN---EIPLANSVMSMYAKFGKVNEARSIF--DEIG 192
S R G H K G L+ P N+++SMYA+ G V++A+ +F G
Sbjct: 163 SHLADQGHRLGREAHAFALKHGFLDKGRERFPF-NALLSMYARLGLVDDAQRLFFSSGAG 221
Query: 193 ETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALS 252
+V+W T+I V G EA + M + V PD V F + + C+++ L +
Sbjct: 222 VGDLVTWNTMISLLVQGGRCEEAVQVLYDMVALGVRPDGVTFASALPACSRLELLGVGRE 281
Query: 253 MHSLLLKSGYNNEDPLDN-----LLVSMYTKCGDLELARRVFDAVLE--KSVFLWTSMIG 305
+H+ +LK ++D N LV MY + ARRVFD V E + + +W +MI
Sbjct: 282 VHAFVLK----DDDLAANSFVASALVDMYASNEQVSHARRVFDMVPEHGRQLGMWNAMIC 337
Query: 306 GYAQL-GYPSEAVNLFKRL-LKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGL 363
GYAQ G EA+ LF R+ + P+E T+A L ACA + + + Y+V +
Sbjct: 338 GYAQHGGMDEEAIELFSRMEAEAGCAPSETTMAGVLPACARSEVFTGKEAVHGYVVKRDM 397
Query: 364 ESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYK 423
SNR VQ +L+ M+++ GR+++A +F + +D+ W+ +I G + G+ +A L +
Sbjct: 398 ASNRFVQNALMDMYARLGRMDEAHTIFAMIDLRDIVSWNTLITGCIVQGLISEAFQLVRE 457
Query: 424 MQ-----------------HVEGLK--PDAVVYTSILSACS-----HSGMVDDGLSFFKS 459
MQ V+G + P+ + ++L C+ G G + +
Sbjct: 458 MQLPSSAASGETMLEGDDTSVDGQRCMPNNITLMTLLPGCAVLAAPARGKEIHGYAVRHA 517
Query: 460 MQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMP 497
++S+ + + LVD+ + G LA +P
Sbjct: 518 LESDLAVGSA------LVDMYAKCGCLALARAVFDRLP 549
>gi|225433177|ref|XP_002281549.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15130 [Vitis vinifera]
gi|296083673|emb|CBI23662.3| unnamed protein product [Vitis vinifera]
Length = 685
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 187/589 (31%), Positives = 333/589 (56%), Gaps = 17/589 (2%)
Query: 36 VLKACANINSIWD-GKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVR 94
+L+ C+ N ++D G +VH+ + +GF D + LIDMY KCS + V D M R
Sbjct: 10 LLRNCSK-NGLFDQGLQVHAAAVNMGFGFDLIMNNDLIDMYGKCSRVDLACSVFDRMLER 68
Query: 95 LRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCS----FRQGIS 150
+VVSW +++ + + ++ +L EM G++ + TF + + C G+
Sbjct: 69 --NVVSWTALMCGYLQEGNAKGSLALLCEMGYSGVKPNEFTFSTSLKACGALGVVENGMQ 126
Query: 151 MHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVG 210
+H K G + + N+ + MY+K G++ A +F+++ ++VSW +I G+ + G
Sbjct: 127 IHGMCVKSGFEWVSV-VGNATIDMYSKCGRIGMAEQVFNKMPFRNLVSWNAMIAGHTHEG 185
Query: 211 NVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGY--NNEDPL 268
N ++ L +M+ PD F + + C +G + +H+ L+ G+ + + +
Sbjct: 186 NGRKSLVLFQRMQGQGEVPDEFTFTSTLKACGALGAIRGGTQIHASLITRGFPISIRNII 245
Query: 269 DNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSV 328
+ +V +Y KCG L A++VFD + +K++ W+++I G+AQ G EA++LF++L ++
Sbjct: 246 ASAIVDLYAKCGYLFEAQKVFDRIEQKNLISWSALIQGFAQEGNLLEAMDLFRQLRESVS 305
Query: 329 RPNEATLATTLSACAELGSLSKGKEIEEYI--VLNGLESNRQVQTSLIHMFSKCGRINKA 386
+ L+ + A+L + +GK++ YI V +GL+ + V S+I M+ KCG +A
Sbjct: 306 NVDGFVLSIMMGVFADLALVEQGKQMHCYILKVPSGLDIS--VANSIIDMYLKCGLTEEA 363
Query: 387 KEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSH 446
+ +F + +++ W+ MI GY HG+G++A++LF +MQ ++G++ D V Y ++LSACSH
Sbjct: 364 ERLFSEMQVRNVVSWTVMITGYGKHGLGEKAIHLFNRMQ-LDGIELDEVAYLALLSACSH 422
Query: 447 SGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWA 506
SG++ + +F + +N ++P+IEHY C+VD+LGRAG+ A I M ++ +W
Sbjct: 423 SGLIRESQEYFSRLCNNHQMKPNIEHYACMVDILGRAGQLKEAKNLIENMKLKPNEGIWQ 482
Query: 507 PLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRR 566
LLSAC H N+E+G + L ++ + NY++M+N++ AG WKE R L+ +
Sbjct: 483 TLLSACRVHGNLEIGREVGEILFRMDTDNPVNYVMMSNIYAEAGYWKECERVRKLVKAKG 542
Query: 567 LTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKELHIKLL-EAGY 614
L KE G S VEI+ + F GD +H L+ I + LKE+ ++ E GY
Sbjct: 543 LKKEAGQSWVEINKEIHFFYGGDDTHPLTEKIHEMLKEMERRVKEEVGY 591
Score = 185 bits (469), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 121/432 (28%), Positives = 224/432 (51%), Gaps = 24/432 (5%)
Query: 9 GSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQ 68
G+ + +L+ M +GV N FTF LKAC + + +G ++H +K GF+ + V
Sbjct: 84 GNAKGSLALLCEMGYSGVKPNEFTFSTSLKACGALGVVENGMQIHGMCVKSGFEWVSVVG 143
Query: 69 TGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLG 128
IDMYSKC + +V ++MP R++VSWN++I+ H+ +++++ + M G
Sbjct: 144 NATIDMYSKCGRIGMAEQVFNKMP--FRNLVSWNAMIAGHTHEGNGRKSLVLFQRMQGQG 201
Query: 129 LELSASTFVSVVSGC----SFRQGISMHCCVYKLGL-LNNEIPLANSVMSMYAKFGKVNE 183
TF S + C + R G +H + G ++ +A++++ +YAK G + E
Sbjct: 202 EVPDEFTFTSTLKACGALGAIRGGTQIHASLITRGFPISIRNIIASAIVDLYAKCGYLFE 261
Query: 184 ARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGC-A 242
A+ +FD I + +++SW+ +I G+ GN+ EA L Q+R D V L++++G A
Sbjct: 262 AQKVFDRIEQKNLISWSALIQGFAQEGNLLEAMDLFRQLRESVSNVDGFV-LSIMMGVFA 320
Query: 243 QVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTS 302
+ + MH +LK + + N ++ MY KCG E A R+F + ++V WT
Sbjct: 321 DLALVEQGKQMHCYILKVPSGLDISVANSIIDMYLKCGLTEEAERLFSEMQVRNVVSWTV 380
Query: 303 MIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNG 362
MI GY + G +A++LF R+ + +E LSAC+ G + +E +EY +
Sbjct: 381 MITGYGKHGLGEKAIHLFNRMQLDGIELDEVAYLALLSACSHSGLI---RESQEY--FSR 435
Query: 363 LESNRQVQTSLIH------MFSKCGRINKAKEVFERVPDK-DLAVWSAMINGYAIHG--- 412
L +N Q++ ++ H + + G++ +AK + E + K + +W +++ +HG
Sbjct: 436 LCNNHQMKPNIEHYACMVDILGRAGQLKEAKNLIENMKLKPNEGIWQTLLSACRVHGNLE 495
Query: 413 MGDQALNLFYKM 424
+G + + ++M
Sbjct: 496 IGREVGEILFRM 507
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 102/412 (24%), Positives = 194/412 (47%), Gaps = 59/412 (14%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI T+ G+ ++L + M G + FTF LKAC + +I G ++H+ ++ G
Sbjct: 177 MIAGHTHEGNGRKSLVLFQRMQGQGEVPDEFTFTSTLKACGALGAIRGGTQIHASLITRG 236
Query: 61 FQQDA--FVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAI 118
F + + ++D+Y+KC ++KV D + ++++SW+++I ++ EA+
Sbjct: 237 FPISIRNIIASAIVDLYAKCGYLFEAQKVFDR--IEQKNLISWSALIQGFAQEGNLLEAM 294
Query: 119 LVLKEM---------WVLGLELSASTFVSVVSGCSFRQGISMHCCVYKL--GLLNNEIPL 167
+ +++ +VL + + +++V QG MHC + K+ GL +I +
Sbjct: 295 DLFRQLRESVSNVDGFVLSIMMGVFADLALVE-----QGKQMHCYILKVPSGL---DISV 346
Query: 168 ANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSV 227
ANS++ MY K G EA +F E+ ++VSWT +I GY G +A L N+M+ +
Sbjct: 347 ANSIIDMYLKCGLTEEAERLFSEMQVRNVVSWTVMITGYGKHGLGEKAIHLFNRMQLDGI 406
Query: 228 TPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARR 287
D V +L L+ C+ HS L++ L N
Sbjct: 407 ELDEVAYLALLSACS-----------HSGLIRESQEYFSRLCN----------------- 438
Query: 288 VFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGS 347
+ ++ ++ + M+ + G EA NL + + ++PNE T LSAC G+
Sbjct: 439 --NHQMKPNIEHYACMVDILGRAGQLKEAKNLIENM---KLKPNEGIWQTLLSACRVHGN 493
Query: 348 LSKGKEIEEYIVLNGLESNRQVQTSLI-HMFSKCGRINKAKEVFERVPDKDL 398
L G+E+ E +L ++++ V ++ +++++ G + + V + V K L
Sbjct: 494 LEIGREVGE--ILFRMDTDNPVNYVMMSNIYAEAGYWKECERVRKLVKAKGL 543
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 82/163 (50%), Gaps = 2/163 (1%)
Query: 335 LATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVP 394
LA L C++ G +G ++ V G + + LI M+ KC R++ A VF+R+
Sbjct: 7 LAKLLRNCSKNGLFDQGLQVHAAAVNMGFGFDLIMNNDLIDMYGKCSRVDLACSVFDRML 66
Query: 395 DKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGL 454
++++ W+A++ GY G +L L +M + G+KP+ +++ L AC G+V++G+
Sbjct: 67 ERNVVSWTALMCGYLQEGNAKGSLALLCEMGY-SGVKPNEFTFSTSLKACGALGVVENGM 125
Query: 455 SFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMP 497
M G E +D+ + GR +A + ++MP
Sbjct: 126 Q-IHGMCVKSGFEWVSVVGNATIDMYSKCGRIGMAEQVFNKMP 167
>gi|357481283|ref|XP_003610927.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512262|gb|AES93885.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 802
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 179/525 (34%), Positives = 284/525 (54%), Gaps = 36/525 (6%)
Query: 132 SASTFVSVVSGCSFRQGISMHCCVYKLGLLNNEIP---LANSVMSMYAKFGKVNEARSIF 188
S + ++++ C + + + V+ +N IP ++N ++ MYAK G + +A+ +F
Sbjct: 62 SPRLYSTLIAACLRHRKLELGKRVHAHTKASNFIPGIVISNRLIHMYAKCGSLVDAQMLF 121
Query: 189 DEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQM-RRMSVTPDLVV-------------- 233
DEI + + SW T+I GY NVG + +A L ++M R + + + V+
Sbjct: 122 DEIPQKDLCSWNTMISGYANVGRIEQARKLFDEMPHRDNFSWNAVISGYVSQGWYMEALD 181
Query: 234 -FLNLILGCAQVGNLFLAL----------------SMHSLLLKSGYNNEDPLDNLLVSMY 276
F + + N+F +H L++SG ++ + L+ +Y
Sbjct: 182 LFRMMQENESSNCNMFTLSSALAAAAAISSLRRGKEIHGYLIRSGLELDEVVWTALLDLY 241
Query: 277 TKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLA 336
KCG L AR +FD + +K + WT+MI + G E +LF+ L+ + VRPNE T A
Sbjct: 242 GKCGSLNEARGIFDQMADKDIVSWTTMIHRCFEDGRKKEGFSLFRDLMGSGVRPNEYTFA 301
Query: 337 TTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDK 396
L+ACA+L + GKE+ Y+ G + ++L+H++SKCG A+ VF ++P
Sbjct: 302 GVLNACADLAAEQMGKEVHGYMTRVGYDPFSFAASALVHVYSKCGNTETARRVFNQMPRP 361
Query: 397 DLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSF 456
DL W+++I GYA +G D AL F + G KPD + + +LSAC+H+G+VD GL +
Sbjct: 362 DLVSWTSLIVGYAQNGQPDMALQFFESLLR-SGTKPDEITFVGVLSACTHAGLVDIGLEY 420
Query: 457 FKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHH 516
F S++ G+ + +HY C++DLL R+GRF A I MP++ +WA LL C H
Sbjct: 421 FHSVKEKHGLVHTADHYACVIDLLARSGRFKEAENIIDNMPMKPDKFLWASLLGGCRIHG 480
Query: 517 NVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQV 576
N+EL E AAK L L P + YI ++N++ +AG+W E R MD+R + K+PG S +
Sbjct: 481 NIELAERAAKALFELEPENPATYITLSNIYANAGLWTEETKVRNDMDNRGIVKKPGKSWI 540
Query: 577 EIDGSVQVFVAGDRSHHLSVDIRKTLKELHIKLLEAGYIAEADIV 621
EI V VF+ GD SH DI + L EL K+ E GY+A+ + V
Sbjct: 541 EIKRQVHVFLVGDTSHPKISDIHEYLGELSKKMKEEGYVADTNFV 585
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 118/434 (27%), Positives = 206/434 (47%), Gaps = 44/434 (10%)
Query: 33 FPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMP 92
+ ++ AC + GKRVH+H F + LI MY+KC V ++ + DE+P
Sbjct: 66 YSTLIAACLRHRKLELGKRVHAHTKASNFIPGIVISNRLIHMYAKCGSLVDAQMLFDEIP 125
Query: 93 VRLRSVVSWNSIISAHSRACLNDEAILVLKEM-------------------WVL-GLELS 132
+ + SWN++IS ++ ++A + EM W + L+L
Sbjct: 126 --QKDLCSWNTMISGYANVGRIEQARKLFDEMPHRDNFSWNAVISGYVSQGWYMEALDLF 183
Query: 133 ASTFVSVVSGCSF----------------RQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
+ S C+ R+G +H + + GL +E+ + +++ +Y
Sbjct: 184 RMMQENESSNCNMFTLSSALAAAAAISSLRRGKEIHGYLIRSGLELDEV-VWTALLDLYG 242
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K G +NEAR IFD++ + IVSWTT+I G E F L + V P+ F
Sbjct: 243 KCGSLNEARGIFDQMADKDIVSWTTMIHRCFEDGRKKEGFSLFRDLMGSGVRPNEYTFAG 302
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
++ CA + + +H + + GY+ + LV +Y+KCG+ E ARRVF+ +
Sbjct: 303 VLNACADLAAEQMGKEVHGYMTRVGYDPFSFAASALVHVYSKCGNTETARRVFNQMPRPD 362
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEE 356
+ WTS+I GYAQ G P A+ F+ LL++ +P+E T LSAC G + G E
Sbjct: 363 LVSWTSLIVGYAQNGQPDMALQFFESLLRSGTKPDEITFVGVLSACTHAGLVDIGLEYFH 422
Query: 357 YIV-LNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDK-DLAVWSAMINGYAIHG-- 412
+ +GL +I + ++ GR +A+ + + +P K D +W++++ G IHG
Sbjct: 423 SVKEKHGLVHTADHYACVIDLLARSGRFKEAENIIDNMPMKPDKFLWASLLGGCRIHGNI 482
Query: 413 -MGDQALNLFYKMQ 425
+ ++A ++++
Sbjct: 483 ELAERAAKALFELE 496
Score = 108 bits (270), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 81/301 (26%), Positives = 142/301 (47%), Gaps = 34/301 (11%)
Query: 229 PDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDL------ 282
P ++ LI C + L L +H+ S + + N L+ MY KCG L
Sbjct: 61 PSPRLYSTLIAACLRHRKLELGKRVHAHTKASNFIPGIVISNRLIHMYAKCGSLVDAQML 120
Query: 283 -------------------------ELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAV 317
E AR++FD + + F W ++I GY G+ EA+
Sbjct: 121 FDEIPQKDLCSWNTMISGYANVGRIEQARKLFDEMPHRDNFSWNAVISGYVSQGWYMEAL 180
Query: 318 NLFKRLLKT-SVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHM 376
+LF+ + + S N TL++ L+A A + SL +GKEI Y++ +GLE + V T+L+ +
Sbjct: 181 DLFRMMQENESSNCNMFTLSSALAAAAAISSLRRGKEIHGYLIRSGLELDEVVWTALLDL 240
Query: 377 FSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVV 436
+ KCG +N+A+ +F+++ DKD+ W+ MI+ G + +LF + G++P+
Sbjct: 241 YGKCGSLNEARGIFDQMADKDIVSWTTMIHRCFEDGRKKEGFSLFRDLMG-SGVRPNEYT 299
Query: 437 YTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEM 496
+ +L+AC+ G M + G +P LV + + G + A + ++M
Sbjct: 300 FAGVLNACADLAAEQMGKEVHGYM-TRVGYDPFSFAASALVHVYSKCGNTETARRVFNQM 358
Query: 497 P 497
P
Sbjct: 359 P 359
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 113/221 (51%), Gaps = 9/221 (4%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI +G +E S + ++ +GV N +TF VL ACA++ + GK VH ++ +VG
Sbjct: 268 MIHRCFEDGRKKEGFSLFRDLMGSGVRPNEYTFAGVLNACADLAAEQMGKEVHGYMTRVG 327
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+ +F + L+ +YSKC + ++R+V ++MP +VSW S+I +++ D A+
Sbjct: 328 YDPFSFAASALVHVYSKCGNTETARRVFNQMP--RPDLVSWTSLIVGYAQNGQPDMALQF 385
Query: 121 LKEMWVLGLELSASTFVSVVSGCSFRQGISM-----HCCVYKLGLLNNEIPLANSVMSMY 175
+ + G + TFV V+S C+ + + H K GL++ A V+ +
Sbjct: 386 FESLLRSGTKPDEITFVGVLSACTHAGLVDIGLEYFHSVKEKHGLVHTADHYA-CVIDLL 444
Query: 176 AKFGKVNEARSIFDEIG-ETSIVSWTTIIGGYVNVGNVNEA 215
A+ G+ EA +I D + + W +++GG GN+ A
Sbjct: 445 ARSGRFKEAENIIDNMPMKPDKFLWASLLGGCRIHGNIELA 485
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 75/157 (47%), Gaps = 9/157 (5%)
Query: 307 YAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESN 366
+ Q EAV+ R+ + S R +T ++AC L GK + + +
Sbjct: 42 FCQQNRLKEAVDYLHRIPQPSPR----LYSTLIAACLRHRKLELGKRVHAHTKASNFIPG 97
Query: 367 RQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQH 426
+ LIHM++KCG + A+ +F+ +P KDL W+ MI+GYA G +QA LF +M H
Sbjct: 98 IVISNRLIHMYAKCGSLVDAQMLFDEIPQKDLCSWNTMISGYANVGRIEQARKLFDEMPH 157
Query: 427 VEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSN 463
D + +++S G + L F+ MQ N
Sbjct: 158 -----RDNFSWNAVISGYVSQGWYMEALDLFRMMQEN 189
>gi|297741128|emb|CBI31859.3| unnamed protein product [Vitis vinifera]
Length = 514
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 168/433 (38%), Positives = 262/433 (60%), Gaps = 2/433 (0%)
Query: 150 SMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNV 209
S+H KLG + + ++N+++ MYA G++ A+ +FD + + +VSW T+I GY
Sbjct: 45 SIHVHALKLGF-ESYLFVSNALIHMYAMCGQLGFAQKMFDGMLDRDLVSWNTLICGYSQY 103
Query: 210 GNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLD 269
E L + M ++ D V + +IL C+ +G+ A SM + ++ + L
Sbjct: 104 NKYKEVLRLFDAMTAANIKADAVTMVKIILACSHLGDWEFADSMVKYIKENNLEIDVYLG 163
Query: 270 NLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVR 329
N L+ MY + G+L AR++FD + ++ V WTSMI GY+Q S+AV LF+ ++ V+
Sbjct: 164 NTLIDMYGRLGNLTAARKLFDNMPKRDVISWTSMITGYSQASQFSDAVKLFQEMMAAKVK 223
Query: 330 PNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEV 389
P++ T+A+ LSACA LG L G + YI +G++++ V SLI M+ KCG + KA EV
Sbjct: 224 PDKVTVASVLSACAHLGKLDVGWAVHHYIRRHGVQADIYVGNSLIDMYCKCGMVEKALEV 283
Query: 390 FERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGM 449
F R+ DKD W+++I+G A++G + AL+LF +M EG++P + IL AC+H+G+
Sbjct: 284 FHRMKDKDSVSWTSVISGLAVNGFANSALDLFSQMLR-EGVQPTHGTFVGILLACAHAGL 342
Query: 450 VDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLL 509
V+ GL +F+SM+S G+ P+++HY C+VDLL R+G D A + I +MP+ VW LL
Sbjct: 343 VNKGLEYFESMESVHGLVPAMKHYGCVVDLLSRSGNIDKAYEFIKKMPIVPDVVVWRILL 402
Query: 510 SACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTK 569
SAC H NV L E A K LL L+P +GNY+L++N + W +A R LM+D + K
Sbjct: 403 SACKLHGNVVLAEIATKRLLELDPCDSGNYVLLSNTYAGVDRWDDAMKMRELMEDSDVQK 462
Query: 570 EPGWSQVEIDGSV 582
G S +E+DG V
Sbjct: 463 PSGSSSIEVDGMV 475
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 115/383 (30%), Positives = 195/383 (50%), Gaps = 7/383 (1%)
Query: 35 LVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVR 94
LV+ NIN+ +H H LK+GF+ FV LI MY+ C ++K+ D M
Sbjct: 29 LVVALTTNINASTISSSIHVHALKLGFESYLFVSNALIHMYAMCGQLGFAQKMFDGM--L 86
Query: 95 LRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCSFRQGISMHCC 154
R +VSWN++I +S+ E + + M ++ A T V ++ CS
Sbjct: 87 DRDLVSWNTLICGYSQYNKYKEVLRLFDAMTAANIKADAVTMVKIILACSHLGDWEFADS 146
Query: 155 VYKLGLLNN---EIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGN 211
+ K NN ++ L N+++ MY + G + AR +FD + + ++SWT++I GY
Sbjct: 147 MVKYIKENNLEIDVYLGNTLIDMYGRLGNLTAARKLFDNMPKRDVISWTSMITGYSQASQ 206
Query: 212 VNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNL 271
++A L +M V PD V +++ CA +G L + ++H + + G + + N
Sbjct: 207 FSDAVKLFQEMMAAKVKPDKVTVASVLSACAHLGKLDVGWAVHHYIRRHGVQADIYVGNS 266
Query: 272 LVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPN 331
L+ MY KCG +E A VF + +K WTS+I G A G+ + A++LF ++L+ V+P
Sbjct: 267 LIDMYCKCGMVEKALEVFHRMKDKDSVSWTSVISGLAVNGFANSALDLFSQMLREGVQPT 326
Query: 332 EATLATTLSACAELGSLSKGKE-IEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVF 390
T L ACA G ++KG E E ++GL + ++ + S+ G I+KA E
Sbjct: 327 HGTFVGILLACAHAGLVNKGLEYFESMESVHGLVPAMKHYGCVVDLLSRSGNIDKAYEFI 386
Query: 391 ERVPD-KDLAVWSAMINGYAIHG 412
+++P D+ VW +++ +HG
Sbjct: 387 KKMPIVPDVVVWRILLSACKLHG 409
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 122/239 (51%), Gaps = 7/239 (2%)
Query: 11 FEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTG 70
++E L + +M + ++ T ++ AC+++ + ++ + + D ++
Sbjct: 106 YKEVLRLFDAMTAANIKADAVTMVKIILACSHLGDWEFADSMVKYIKENNLEIDVYLGNT 165
Query: 71 LIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLE 130
LIDMY + + ++RK+ D MP R V+SW S+I+ +S+A +A+ + +EM ++
Sbjct: 166 LIDMYGRLGNLTAARKLFDNMPK--RDVISWTSMITGYSQASQFSDAVKLFQEMMAAKVK 223
Query: 131 LSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARS 186
T SV+S C+ G ++H + + G + +I + NS++ MY K G V +A
Sbjct: 224 PDKVTVASVLSACAHLGKLDVGWAVHHYIRRHG-VQADIYVGNSLIDMYCKCGMVEKALE 282
Query: 187 IFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVG 245
+F + + VSWT++I G G N A L +QM R V P F+ ++L CA G
Sbjct: 283 VFHRMKDKDSVSWTSVISGLAVNGFANSALDLFSQMLREGVQPTHGTFVGILLACAHAG 341
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/250 (24%), Positives = 110/250 (44%), Gaps = 32/250 (12%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI + F + + + M+ V + T VL ACA++ + G VH ++ + G
Sbjct: 197 MITGYSQASQFSDAVKLFQEMMAAKVKPDKVTVASVLSACAHLGKLDVGWAVHHYIRRHG 256
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
Q D +V LIDMY KC + +V M + + VSW S+IS + + A+ +
Sbjct: 257 VQADIYVGNSLIDMYCKCGMVEKALEVFHRM--KDKDSVSWTSVISGLAVNGFANSALDL 314
Query: 121 LKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGK 180
+M G++ + TFV ++ C+ GL+N + S+ S++
Sbjct: 315 FSQMLREGVQPTHGTFVGILLACA------------HAGLVNKGLEYFESMESVHGLVPA 362
Query: 181 VNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILG 240
+ + D + + GN+++A+ +++M + PD+VV+ L+
Sbjct: 363 MKHYGCVVDLLSRS---------------GNIDKAYEF---IKKMPIVPDVVVWRILLSA 404
Query: 241 CAQVGNLFLA 250
C GN+ LA
Sbjct: 405 CKLHGNVVLA 414
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 87/176 (49%), Gaps = 10/176 (5%)
Query: 324 LKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRI 383
L +++ P +A T + A S S I + + G ES V +LIHM++ CG++
Sbjct: 20 LSSTIAPAALVVALTTNINASTISSS----IHVHALKLGFESYLFVSNALIHMYAMCGQL 75
Query: 384 NKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSA 443
A+++F+ + D+DL W+ +I GY+ + + L LF M +K DAV I+ A
Sbjct: 76 GFAQKMFDGMLDRDLVSWNTLICGYSQYNKYKEVLRLFDAMT-AANIKADAVTMVKIILA 134
Query: 444 CSHSGMVDDGLSFFKSMQSNFGIEPSIEHYL--CLVDLLGRAGRFDLALKTIHEMP 497
CSH G + S K ++ N I+ YL L+D+ GR G A K MP
Sbjct: 135 CSHLGDWEFADSMVKYIKEN---NLEIDVYLGNTLIDMYGRLGNLTAARKLFDNMP 187
>gi|15217508|ref|NP_172412.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806401|sp|Q56XI1.2|PPR25_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09410
gi|3482916|gb|AAC33201.1| Hypothetical protein [Arabidopsis thaliana]
gi|91805759|gb|ABE65608.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332190317|gb|AEE28438.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 705
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 188/551 (34%), Positives = 312/551 (56%), Gaps = 26/551 (4%)
Query: 70 GLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGL 129
GL+ Y K + +RKV D MP R +VVSW +++ + +++ + V + ++
Sbjct: 84 GLVSGYMKNGEIDEARKVFDLMPER--NVVSWTALVKGY----VHNGKVDVAESLFWKMP 137
Query: 130 ELSASTFVSVVSGCSFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFD 189
E + ++ ++ G I C +Y++ + I + + + K G+V+EAR IFD
Sbjct: 138 EKNKVSWTVMLIGFLQDGRIDDACKLYEMIPDKDNIARTSMIHGL-CKEGRVDEAREIFD 196
Query: 190 EIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFL 249
E+ E S+++WTT++ GY V++A + + M + V + ++++G Q G +
Sbjct: 197 EMSERSVITWTTMVTGYGQNNRVDDARKIFDVMPEKTE----VSWTSMLMGYVQNGRIED 252
Query: 250 ALSMHSLLLKSGYNNEDPLD-----NLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMI 304
A + ++ P+ N ++S + G++ ARRVFD++ E++ W ++I
Sbjct: 253 AEELFEVM---------PVKPVIACNAMISGLGQKGEIAKARRVFDSMKERNDASWQTVI 303
Query: 305 GGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLE 364
+ + G+ EA++LF + K VRP TL + LS CA L SL GK++ +V +
Sbjct: 304 KIHERNGFELEALDLFILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQFD 363
Query: 365 SNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKM 424
+ V + L+ M+ KCG + K+K +F+R P KD+ +W+++I+GYA HG+G++AL +F +M
Sbjct: 364 VDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIMWNSIISGYASHGLGEEALKVFCEM 423
Query: 425 QHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAG 484
KP+ V + + LSACS++GMV++GL ++SM+S FG++P HY C+VD+LGRAG
Sbjct: 424 PLSGSTKPNEVTFVATLSACSYAGMVEEGLKIYESMESVFGVKPITAHYACMVDMLGRAG 483
Query: 485 RFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMAN 544
RF+ A++ I M VE A VW LL AC H +++ E+ AK L+ + P ++G YIL++N
Sbjct: 484 RFNEAMEMIDSMTVEPDAAVWGSLLGACRTHSQLDVAEFCAKKLIEIEPENSGTYILLSN 543
Query: 545 LFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGD-RSHHLSVDIRKTLK 603
++ S G W + A R LM R + K PG S E++ V F G SH I K L
Sbjct: 544 MYASQGRWADVAELRKLMKTRLVRKSPGCSWTEVENKVHAFTRGGINSHPEQESILKILD 603
Query: 604 ELHIKLLEAGY 614
EL L EAGY
Sbjct: 604 ELDGLLREAGY 614
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 143/277 (51%), Gaps = 17/277 (6%)
Query: 169 NSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVT 228
N ++S Y K G+++EAR +FD + E ++VSWT ++ GYV+ G V+ A L +M
Sbjct: 83 NGLVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWKMPE---- 138
Query: 229 PDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRV 288
+ V + +++G Q G + A ++ ++ + ++ ++ K G ++ AR +
Sbjct: 139 KNKVSWTVMLIGFLQDGRIDDACKLYEMIP----DKDNIARTSMIHGLCKEGRVDEAREI 194
Query: 289 FDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSL 348
FD + E+SV WT+M+ GY Q +A +F + + + E + + L + G +
Sbjct: 195 FDEMSERSVITWTTMVTGYGQNNRVDDARKIFDVMPEKT----EVSWTSMLMGYVQNGRI 250
Query: 349 SKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGY 408
+E+ E + + + + ++I + G I KA+ VF+ + +++ A W +I +
Sbjct: 251 EDAEELFEVMPVKPVIAC----NAMISGLGQKGEIAKARRVFDSMKERNDASWQTVIKIH 306
Query: 409 AIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACS 445
+G +AL+LF MQ +G++P SILS C+
Sbjct: 307 ERNGFELEALDLFILMQK-QGVRPTFPTLISILSVCA 342
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 83/333 (24%), Positives = 151/333 (45%), Gaps = 61/333 (18%)
Query: 166 PLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRM 225
P AN ++ ++ GK++EAR +FD SI SW +++ GY
Sbjct: 18 PTANVRITHLSRIGKIHEARKLFDSCDSKSISSWNSMVAGY------------------- 58
Query: 226 SVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELA 285
F NL+ A+ LF + +++ +G LVS Y K G+++ A
Sbjct: 59 --------FANLMPRDAR--KLFDEMPDRNIISWNG----------LVSGYMKNGEIDEA 98
Query: 286 RRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAEL 345
R+VFD + E++V WT+++ GY G A +LF ++ + N+ + L +
Sbjct: 99 RKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWKMPEK----NKVSWTVMLIGFLQD 154
Query: 346 GSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMI 405
G + ++ E I + + +TS+IH K GR+++A+E+F+ + ++ + W+ M+
Sbjct: 155 GRIDDACKLYEMIP----DKDNIARTSMIHGLCKEGRVDEAREIFDEMSERSVITWTTMV 210
Query: 406 NGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFG 465
GY + D A +F M + V +TS+L +G ++D F+ M
Sbjct: 211 TGYGQNNRVDDARKIFDVMP-----EKTEVSWTSMLMGYVQNGRIEDAEELFEVMP---- 261
Query: 466 IEPSIEHYLC--LVDLLGRAGRFDLALKTIHEM 496
++P I C ++ LG+ G A + M
Sbjct: 262 VKPVI---ACNAMISGLGQKGEIAKARRVFDSM 291
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 106/211 (50%), Gaps = 8/211 (3%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+I+ NG E L + M + GV T +L CA++ S+ GK+VH+ +++
Sbjct: 302 VIKIHERNGFELEALDLFILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQ 361
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F D +V + L+ MY KC + V S+ + D P + ++ WNSIIS ++ L +EA+ V
Sbjct: 362 FDVDVYVASVLMTMYIKCGELVKSKLIFDRFPS--KDIIMWNSIISGYASHGLGEEALKV 419
Query: 121 LKEMWVLG-LELSASTFVSVVSGCSF----RQGISMHCCVYKLGLLNNEIPLANSVMSMY 175
EM + G + + TFV+ +S CS+ +G+ ++ + + + ++ M
Sbjct: 420 FCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIYESMESVFGVKPITAHYACMVDML 479
Query: 176 AKFGKVNEARSIFDEIG-ETSIVSWTTIIGG 205
+ G+ NEA + D + E W +++G
Sbjct: 480 GRAGRFNEAMEMIDSMTVEPDAAVWGSLLGA 510
>gi|356518094|ref|XP_003527718.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g04860-like [Glycine max]
Length = 714
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 176/562 (31%), Positives = 308/562 (54%), Gaps = 6/562 (1%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+I + +G + L + ML+ N T +L +C G+ VH+ +K G
Sbjct: 115 LICGYSQHGHPHDALQLFVHMLRESFRPNQTTIASLLPSCGRRELFLQGRSVHAFGIKAG 174
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
D + L MY+KC D +S+ + EM + +V+SWN++I A+ + D+A+L
Sbjct: 175 LGLDPQLSNALTSMYAKCDDLEASQLLFQEMGEK--NVISWNTMIGAYGQNGFEDKAVLC 232
Query: 121 LKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGK 180
KEM G + S T ++++S + + ++HC + K G + + S++ +YAK G
Sbjct: 233 FKEMLKEGWQPSPVTMMNLMSANAVPE--TVHCYIIKCGF-TGDASVVTSLVCLYAKQGF 289
Query: 181 VNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILG 240
+ A+ +++ ++S T II Y G V A Q ++ + PD V ++++ G
Sbjct: 290 TDMAKLLYECYPTKDLISLTGIISSYSEKGEVESAVECFIQTLKLDIKPDAVALISVLHG 349
Query: 241 CAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLW 300
+ + + + H LK+G N+ + N L+S Y++ ++ A +F EK + W
Sbjct: 350 ISDPSHFAIGCAFHGYGLKNGLTNDCLVANGLISFYSRFDEILAALSLFFDRSEKPLITW 409
Query: 301 TSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVL 360
SMI G Q G S+A+ LF ++ +P+ T+A+ LS C +LG L G+ + YI+
Sbjct: 410 NSMISGCVQAGKSSDAMELFCQMNMCGQKPDAITIASLLSGCCQLGYLRIGETLHGYILR 469
Query: 361 NGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNL 420
N ++ T+LI M++KCGR++ A+++F + D L W+++I+GY+++G+ +A
Sbjct: 470 NNVKVEDFTGTALIDMYTKCGRLDYAEKIFYSINDPCLVTWNSIISGYSLYGLEHKAFGC 529
Query: 421 FYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLL 480
F K+Q +GL+PD + + +L+AC+H G+V G+ +F+ M+ +G+ P+++HY C+V LL
Sbjct: 530 FSKLQE-QGLEPDKITFLGVLAACTHGGLVYAGMEYFRIMRKEYGLMPTLQHYACIVGLL 588
Query: 481 GRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYI 540
GRAG F A++ I+ M + + VW LLSAC V+LGE AKNL LN + G Y+
Sbjct: 589 GRAGLFKEAIEIINNMEIRPDSAVWGALLSACWIQQEVKLGECLAKNLFLLNYKNGGFYV 648
Query: 541 LMANLFTSAGMWKEAATARGLM 562
++NL+ G W + A R +M
Sbjct: 649 SLSNLYAIVGRWDDVARVRDMM 670
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 134/497 (26%), Positives = 235/497 (47%), Gaps = 28/497 (5%)
Query: 15 LSTYSSMLQTGVHGNSFTFPLVLKAC--------ANINSIW-DGKRVHSHVLKVGFQQDA 65
L + +LQ+ + N TF L++KAC + W ++ + +LK G Q
Sbjct: 19 LLIFRQLLQSSANPNHLTFSLLIKACLSSSSSFSRGSPTAWLQVNQIQTQLLKRGIDQFL 78
Query: 66 FVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMW 125
+V T LID Y K +R++ +++P VVSWN +I +S+ +A+ + M
Sbjct: 79 YVNTALIDFYMKLGFTTHARQLFEDLPS--ADVVSWNVLICGYSQHGHPHDALQLFVHML 136
Query: 126 VLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKV 181
+ +T S++ C F QG S+H K G L + L+N++ SMYAK +
Sbjct: 137 RESFRPNQTTIASLLPSCGRRELFLQGRSVHAFGIKAG-LGLDPQLSNALTSMYAKCDDL 195
Query: 182 NEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGC 241
++ +F E+GE +++SW T+IG Y G ++A +M + P V +NL+
Sbjct: 196 EASQLLFQEMGEKNVISWNTMIGAYGQNGFEDKAVLCFKEMLKEGWQPSPVTMMNLMSAN 255
Query: 242 AQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWT 301
A + ++H ++K G+ + + LV +Y K G ++A+ +++ K + T
Sbjct: 256 A------VPETVHCYIIKCGFTGDASVVTSLVCLYAKQGFTDMAKLLYECYPTKDLISLT 309
Query: 302 SMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLN 361
+I Y++ G AV F + LK ++P+ L + L ++ + G Y + N
Sbjct: 310 GIISSYSEKGEVESAVECFIQTLKLDIKPDAVALISVLHGISDPSHFAIGCAFHGYGLKN 369
Query: 362 GLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLF 421
GL ++ V LI +S+ I A +F +K L W++MI+G G A+ LF
Sbjct: 370 GLTNDCLVANGLISFYSRFDEILAALSLFFDRSEKPLITWNSMISGCVQAGKSSDAMELF 429
Query: 422 YKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHY--LCLVDL 479
+M ++ G KPDA+ S+LS C G + G + + N +E + L+D+
Sbjct: 430 CQM-NMCGQKPDAITIASLLSGCCQLGYLRIGETLHGYILRN---NVKVEDFTGTALIDM 485
Query: 480 LGRAGRFDLALKTIHEM 496
+ GR D A K + +
Sbjct: 486 YTKCGRLDYAEKIFYSI 502
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 103/350 (29%), Positives = 172/350 (49%), Gaps = 17/350 (4%)
Query: 169 NSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVT 228
+++ Y K G AR +F+++ +VSW +I GY G+ ++A L M R S
Sbjct: 82 TALIDFYMKLGFTTHARQLFEDLPSADVVSWNVLICGYSQHGHPHDALQLFVHMLRESFR 141
Query: 229 PDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRV 288
P+ +L+ C + S+H+ +K+G + L N L SMY KC DLE ++ +
Sbjct: 142 PNQTTIASLLPSCGRRELFLQGRSVHAFGIKAGLGLDPQLSNALTSMYAKCDDLEASQLL 201
Query: 289 FDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSL 348
F + EK+V W +MIG Y Q G+ +AV FK +LK +P+ T+ +SA A
Sbjct: 202 FQEMGEKNVISWNTMIGAYGQNGFEDKAVLCFKEMLKEGWQPSPVTMMNLMSANA----- 256
Query: 349 SKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGY 408
+ + YI+ G + V TSL+ +++K G + AK ++E P KDL + +I+ Y
Sbjct: 257 -VPETVHCYIIKCGFTGDASVVTSLVCLYAKQGFTDMAKLLYECYPTKDLISLTGIISSY 315
Query: 409 AIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEP 468
+ G + A+ F + ++ +KPDAV S+L S G +F +G++
Sbjct: 316 SEKGEVESAVECFIQTLKLD-IKPDAVALISVLHGISDPSHFAIGCAF-----HGYGLKN 369
Query: 469 SIEHYLCLV--DLLGRAGRFD--LALKTIHEMPVEVQAQVWAPLLSACMK 514
+ + CLV L+ RFD LA ++ E W ++S C++
Sbjct: 370 GLTND-CLVANGLISFYSRFDEILAALSLFFDRSEKPLITWNSMISGCVQ 418
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 83/171 (48%), Gaps = 11/171 (6%)
Query: 314 SEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLS---------KGKEIEEYIVLNGLE 364
S A+ +F++LL++S PN T + + AC S + +I+ ++ G++
Sbjct: 16 SSALLIFRQLLQSSANPNHLTFSLLIKACLSSSSSFSRGSPTAWLQVNQIQTQLLKRGID 75
Query: 365 SNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKM 424
V T+LI + K G A+++FE +P D+ W+ +I GY+ HG AL LF M
Sbjct: 76 QFLYVNTALIDFYMKLGFTTHARQLFEDLPSADVVSWNVLICGYSQHGHPHDALQLFVHM 135
Query: 425 QHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFK-SMQSNFGIEPSIEHYL 474
E +P+ S+L +C + G S +++ G++P + + L
Sbjct: 136 LR-ESFRPNQTTIASLLPSCGRRELFLQGRSVHAFGIKAGLGLDPQLSNAL 185
>gi|449448280|ref|XP_004141894.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Cucumis sativus]
gi|449513125|ref|XP_004164238.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Cucumis sativus]
Length = 645
Score = 327 bits (837), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 177/500 (35%), Positives = 280/500 (56%), Gaps = 29/500 (5%)
Query: 149 ISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVN 208
+ +H + + GL +N I L + YA G+++ + +F+ E ++ S++ II +V
Sbjct: 64 LQIHASLLRRGLYHNPI-LNFKLQRSYAALGRLDCSVFVFNTFDEPNVFSFSAIIHSHVQ 122
Query: 209 VGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCA------------QVG---NLFLALSM 253
+ AFG +QM V P+ F +++ C+ ++G +L++ +
Sbjct: 123 SRLFDRAFGYYSQMLSCGVEPNAFTFSSVLKSCSLESGKVLHCQAIKLGLGSDLYVRTGL 182
Query: 254 HSLLLKSG-------YNNEDPLDNL-----LVSMYTKCGDLELARRVFDAVLEKSVFLWT 301
+ + G ++ P +L +++ Y+K G+L+ AR +F+ + E+ V W
Sbjct: 183 VDVYARGGDVVCARQLFDKMPERSLVSLTTMLTCYSKMGELDKARSLFEGMKERDVVCWN 242
Query: 302 SMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLN 361
MIGGYAQ G P+E++ LF+R+L PNE T+ LSAC +LG+L G+ I YI
Sbjct: 243 VMIGGYAQSGVPNESLKLFRRMLVAKAIPNEVTVLAVLSACGQLGALESGRWIHSYIENK 302
Query: 362 GLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLF 421
G++ N V T+LI M+SKCG + A+ VF+R+ DKD+ W++MI GYA+HG AL LF
Sbjct: 303 GIQINVHVGTALIDMYSKCGSLEDARLVFDRIRDKDVVAWNSMIVGYAMHGFSQHALQLF 362
Query: 422 YKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLG 481
+M G KP + + ILSAC H G+V++G SFF+ M+ +GIEP IEHY C+V+LLG
Sbjct: 363 EEMTET-GHKPTDITFIGILSACGHGGLVEEGRSFFRLMRDKYGIEPKIEHYGCMVNLLG 421
Query: 482 RAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYIL 541
RAG + A + M + +W LL C H N++LGE AK L+ ++G Y+L
Sbjct: 422 RAGHLEEAYGLVKNMTIAADPVLWGTLLGCCRLHVNIKLGEEIAKFLVDQKLANSGTYVL 481
Query: 542 MANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKT 601
++N++ + G W+ A R LM + + KE G S +E+D V FVAG+R H S +I
Sbjct: 482 LSNMYAATGNWEGVAKMRTLMKEHGIEKEHGCSSIEVDNKVHEFVAGERKHPKSKEIYVM 541
Query: 602 LKELHIKLLEAGYIAEADIV 621
L E++ L GY + D+V
Sbjct: 542 LNEINSWLKARGYTPQTDVV 561
Score = 158 bits (399), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 110/402 (27%), Positives = 190/402 (47%), Gaps = 52/402 (12%)
Query: 51 RVHSHVLKVGFQQDAFVQTGLIDMYS-----KCSDFVSSRKVLDEMPVRLRSVVSWNSII 105
++H+ +L+ G + + L Y+ CS FV + DE +V S+++II
Sbjct: 65 QIHASLLRRGLYHNPILNFKLQRSYAALGRLDCSVFVFN--TFDE-----PNVFSFSAII 117
Query: 106 SAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGL----- 160
+H ++ L D A +M G+E +A TF SV+ CS G +HC KLGL
Sbjct: 118 HSHVQSRLFDRAFGYYSQMLSCGVEPNAFTFSSVLKSCSLESGKVLHCQAIKLGLGSDLY 177
Query: 161 --------------------LNNEIPLAN-----SVMSMYAKFGKVNEARSIFDEIGETS 195
L +++P + ++++ Y+K G++++ARS+F+ + E
Sbjct: 178 VRTGLVDVYARGGDVVCARQLFDKMPERSLVSLTTMLTCYSKMGELDKARSLFEGMKERD 237
Query: 196 IVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHS 255
+V W +IGGY G NE+ L +M P+ V L ++ C Q+G L +HS
Sbjct: 238 VVCWNVMIGGYAQSGVPNESLKLFRRMLVAKAIPNEVTVLAVLSACGQLGALESGRWIHS 297
Query: 256 LLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSE 315
+ G + L+ MY+KCG LE AR VFD + +K V W SMI GYA G+
Sbjct: 298 YIENKGIQINVHVGTALIDMYSKCGSLEDARLVFDRIRDKDVVAWNSMIVGYAMHGFSQH 357
Query: 316 AVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEI-----EEYIVLNGLESNRQVQ 370
A+ LF+ + +T +P + T LSAC G + +G+ ++Y G+E +
Sbjct: 358 ALQLFEEMTETGHKPTDITFIGILSACGHGGLVEEGRSFFRLMRDKY----GIEPKIEHY 413
Query: 371 TSLIHMFSKCGRINKAKEVFERVP-DKDLAVWSAMINGYAIH 411
++++ + G + +A + + + D +W ++ +H
Sbjct: 414 GCMVNLLGRAGHLEEAYGLVKNMTIAADPVLWGTLLGCCRLH 455
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 88/341 (25%), Positives = 161/341 (47%), Gaps = 42/341 (12%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+I + + F+ YS ML GV N+FTF VLK+C S+ GK +H +K+G
Sbjct: 116 IIHSHVQSRLFDRAFGYYSQMLSCGVEPNAFTFSSVLKSC----SLESGKVLHCQAIKLG 171
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRL------------------------- 95
D +V+TGL+D+Y++ D V +R++ D+MP R
Sbjct: 172 LGSDLYVRTGLVDVYARGGDVVCARQLFDKMPERSLVSLTTMLTCYSKMGELDKARSLFE 231
Query: 96 ----RSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGC----SFRQ 147
R VV WN +I ++++ + +E++ + + M V + T ++V+S C +
Sbjct: 232 GMKERDVVCWNVMIGGYAQSGVPNESLKLFRRMLVAKAIPNEVTVLAVLSACGQLGALES 291
Query: 148 GISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYV 207
G +H + G+ N + + +++ MY+K G + +AR +FD I + +V+W ++I GY
Sbjct: 292 GRWIHSYIENKGIQIN-VHVGTALIDMYSKCGSLEDARLVFDRIRDKDVVAWNSMIVGYA 350
Query: 208 NVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDP 267
G A L +M P + F+ ++ C G + S L++ Y E
Sbjct: 351 MHGFSQHALQLFEEMTETGHKPTDITFIGILSACGHGGLVEEGRSFFR-LMRDKYGIEPK 409
Query: 268 LDNL--LVSMYTKCGDLELARR-VFDAVLEKSVFLWTSMIG 305
+++ +V++ + G LE A V + + LW +++G
Sbjct: 410 IEHYGCMVNLLGRAGHLEEAYGLVKNMTIAADPVLWGTLLG 450
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 133/287 (46%), Gaps = 40/287 (13%)
Query: 234 FLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVL 293
F +LI V +L L +H+ LL+ G + L+ L Y G L+ + VF+
Sbjct: 50 FASLIDKSKSVAHL---LQIHASLLRRGLYHNPILNFKLQRSYAALGRLDCSVFVFNTFD 106
Query: 294 EKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKE 353
E +VF ++++I + Q A + ++L V PN T ++ L +C SL GK
Sbjct: 107 EPNVFSFSAIIHSHVQSRLFDRAFGYYSQMLSCGVEPNAFTFSSVLKSC----SLESGKV 162
Query: 354 IEEYIVLNGLESNRQVQTSLIHM-------------------------------FSKCGR 382
+ + GL S+ V+T L+ + +SK G
Sbjct: 163 LHCQAIKLGLGSDLYVRTGLVDVYARGGDVVCARQLFDKMPERSLVSLTTMLTCYSKMGE 222
Query: 383 INKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILS 442
++KA+ +FE + ++D+ W+ MI GYA G+ +++L LF +M + + P+ V ++LS
Sbjct: 223 LDKARSLFEGMKERDVVCWNVMIGGYAQSGVPNESLKLFRRMLVAKAI-PNEVTVLAVLS 281
Query: 443 ACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLA 489
AC G ++ G + S N GI+ ++ L+D+ + G + A
Sbjct: 282 ACGQLGALESG-RWIHSYIENKGIQINVHVGTALIDMYSKCGSLEDA 327
>gi|297743088|emb|CBI35955.3| unnamed protein product [Vitis vinifera]
Length = 708
Score = 327 bits (837), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 193/649 (29%), Positives = 327/649 (50%), Gaps = 81/649 (12%)
Query: 50 KRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVR-LRSVVSWNSIISAH 108
+++HS ++ G + AF+ ++ +Y+ +++V + P+ +++ WNSI+ A+
Sbjct: 51 QQIHSQIIVTGSHRSAFLAARVVSVYAGFGLVSDAQRVFEVSPIECFSNLLLWNSILRAN 110
Query: 109 SRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCSF----RQGISMHCCVYKLGLLNNE 164
+EA+ + M LG+ TF V+ C+ + S+H V ++G N
Sbjct: 111 VAHGYCEEALEIYCRMRKLGVSADGFTFPLVIRACALMGSRKLCRSVHGHVVEMGFQWN- 169
Query: 165 IPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRR 224
+ + N +M MY K G++++AR +F+ + S VSW T++ GY + + A + M
Sbjct: 170 LHVGNELMGMYGKIGRMDDARKVFERMAVRSCVSWNTMVSGYALNYDCHGASEMFRMMGS 229
Query: 225 MSVTPDLVVFLNLILGCAQVGN------LFLALSM------------------------- 253
+ P+LV + +L+ A+ G LF + M
Sbjct: 230 AGLEPNLVTWTSLLSSHARCGQHVETMELFGRMRMRGIGATAEALAVVLSVSVDLAAFDE 289
Query: 254 ----HSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQ 309
H ++K G+ N + N L+ +Y K G++ AR +F + K++ W ++I YA
Sbjct: 290 GKVIHGYVVKGGFENYLFVKNSLICLYGKHGNVNAARILFLEIKTKNIVSWNALISSYAD 349
Query: 310 LG-----------------YP----------------------SEAVNLFKRLLKTSVRP 330
LG YP EA+ LF+R+ V+
Sbjct: 350 LGWCDEAFAIFLQLEKTDEYPMVRPNVVSWSAVIGGFASKGQGEEALELFRRMQLAKVKA 409
Query: 331 NEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVF 390
N T+A+ LS CAEL +L G+EI ++V + ++ N V LI+M++K G + VF
Sbjct: 410 NSVTIASVLSVCAELAALHLGREIHGHVVRSLMDGNILVGNGLINMYTKSGSFKEGNLVF 469
Query: 391 ERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMV 450
E++ +KDL W+ M+ GY IHG+G+ A+ F +M +G +PD V + ++LSACSH+G+V
Sbjct: 470 EKIENKDLISWNTMVAGYGIHGLGENAIRTFDQMIK-DGFEPDGVTFVAVLSACSHAGLV 528
Query: 451 DDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLS 510
+G F M F +EP +EHY C+VDLLGRAG A K + MPVE A VW LL+
Sbjct: 529 AEGRELFDKMIKEFRVEPQMEHYACMVDLLGRAGLLQEASKVVKSMPVEPNACVWGALLN 588
Query: 511 ACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKE 570
+C H N E+ E A + LN G+Y+L++N++ ++G W+++A R + L K
Sbjct: 589 SCRMHKNTEVAEETASQIFNLNSEIAGSYMLLSNIYAASGRWEDSAKVRISAKTKGLKKT 648
Query: 571 PGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKELHIKLLEAGYIAEAD 619
PG S +++ V +F AG+ H ++ + LK+L +++ GYI + D
Sbjct: 649 PGQSWIQVKKKVYMFSAGNTQHAELEEVYRILKDLGLQMEVEGYIPDID 697
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 128/489 (26%), Positives = 226/489 (46%), Gaps = 79/489 (16%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
++R + +G EE L Y M + GV + FTFPLV++ACA + S + VH HV+++G
Sbjct: 106 ILRANVAHGYCEEALEIYCRMRKLGVSADGFTFPLVIRACALMGSRKLCRSVHGHVVEMG 165
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVR------------------------LR 96
FQ + V L+ MY K +RKV + M VR R
Sbjct: 166 FQWNLHVGNELMGMYGKIGRMDDARKVFERMAVRSCVSWNTMVSGYALNYDCHGASEMFR 225
Query: 97 ---------SVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSG----C 143
++V+W S++S+H+R + E + + M + G+ +A V+S
Sbjct: 226 MMGSAGLEPNLVTWTSLLSSHARCGQHVETMELFGRMRMRGIGATAEALAVVLSVSVDLA 285
Query: 144 SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTII 203
+F +G +H V K G N + + NS++ +Y K G VN AR +F EI +IVSW +I
Sbjct: 286 AFDEGKVIHGYVVK-GGFENYLFVKNSLICLYGKHGNVNAARILFLEIKTKNIVSWNALI 344
Query: 204 GGYVNVGNVNEAFGLCNQMRRMS----VTPDLVVFLNLILG------------------- 240
Y ++G +EAF + Q+ + V P++V + +I G
Sbjct: 345 SSYADLGWCDEAFAIFLQLEKTDEYPMVRPNVVSWSAVIGGFASKGQGEEALELFRRMQL 404
Query: 241 ----------------CAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLEL 284
CA++ L L +H +++S + + N L++MYTK G +
Sbjct: 405 AKVKANSVTIASVLSVCAELAALHLGREIHGHVVRSLMDGNILVGNGLINMYTKSGSFKE 464
Query: 285 ARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAE 344
VF+ + K + W +M+ GY G A+ F +++K P+ T LSAC+
Sbjct: 465 GNLVFEKIENKDLISWNTMVAGYGIHGLGENAIRTFDQMIKDGFEPDGVTFVAVLSACSH 524
Query: 345 LGSLSKGKEIEEYIVLN-GLESNRQVQTSLIHMFSKCGRINKAKEVFERVP-DKDLAVWS 402
G +++G+E+ + ++ +E + ++ + + G + +A +V + +P + + VW
Sbjct: 525 AGLVAEGRELFDKMIKEFRVEPQMEHYACMVDLLGRAGLLQEASKVVKSMPVEPNACVWG 584
Query: 403 AMINGYAIH 411
A++N +H
Sbjct: 585 ALLNSCRMH 593
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 68/239 (28%), Positives = 124/239 (51%), Gaps = 14/239 (5%)
Query: 230 DLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVF 289
D++ F N +L Q L+ +HS ++ +G + L +VS+Y G + A+RVF
Sbjct: 32 DVLDFFNDLL--QQCSKSHLSQQIHSQIIVTGSHRSAFLAARVVSVYAGFGLVSDAQRVF 89
Query: 290 D-AVLE--KSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELG 346
+ + +E ++ LW S++ GY EA+ ++ R+ K V + T + ACA +G
Sbjct: 90 EVSPIECFSNLLLWNSILRANVAHGYCEEALEIYCRMRKLGVSADGFTFPLVIRACALMG 149
Query: 347 SLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMIN 406
S + + ++V G + N V L+ M+ K GR++ A++VFER+ + W+ M++
Sbjct: 150 SRKLCRSVHGHVVEMGFQWNLHVGNELMGMYGKIGRMDDARKVFERMAVRSCVSWNTMVS 209
Query: 407 GYAI----HGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQ 461
GYA+ HG + ++M GL+P+ V +TS+LS+ + G + + F M+
Sbjct: 210 GYALNYDCHGASE-----MFRMMGSAGLEPNLVTWTSLLSSHARCGQHVETMELFGRMR 263
>gi|326515658|dbj|BAK07075.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 796
Score = 327 bits (837), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 186/622 (29%), Positives = 330/622 (53%), Gaps = 17/622 (2%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQT-GVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKV 59
+I + G E +L T++ ++ GV + FT+ L AC+ + +GK VH+ +
Sbjct: 84 LIDAYSRAGQPEASLETFARARRSAGVRADRFTYAAALAACSRAGRLREGKAVHALSVLE 143
Query: 60 GFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAIL 119
G FV L+ MY++C D +R+V D R VSWN+++S + RA D+ +
Sbjct: 144 GIAGGVFVSNSLVSMYARCGDMGQARQVFD--AADERDDVSWNALVSGYVRAGAQDDMLR 201
Query: 120 VLKEMWVLGLELSASTFVSVVSGCSFRQ------GISMHCCVYKLGLLNNEIPLANSVMS 173
V M G+ L++ SV+ C+ ++H CV K G ++++ LA++++
Sbjct: 202 VFAMMRRSGIGLNSFALGSVIKCCAGSDDPVMDIAAAVHGCVVKAGF-DSDVFLASAMVG 260
Query: 174 MYAKFGKVNEARSIFDEIGETSIVSWTTIIGGY------VNVGNVNEAFGLCNQMRRMSV 227
MYAK G ++EA ++F + + ++V + +I G V + EA L ++++ +
Sbjct: 261 MYAKKGALSEAVALFKSVLDPNVVVFNAMIAGLCRDEAAVGTDVLREALSLYSEVQSRGM 320
Query: 228 TPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARR 287
P F ++I C G++ +H +LK + +D + + L+ +Y G +E R
Sbjct: 321 EPTEFTFSSVIRACNLAGDIEFGKQIHGQVLKHCFQGDDFIGSALIDLYLNSGCMEDGFR 380
Query: 288 VFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGS 347
F +V ++ V WT+MI G Q A+ LF LL ++P+ T+++ ++ACA L
Sbjct: 381 CFTSVPKQDVVTWTAMISGCVQNELFERALTLFHELLGAGLKPDPFTISSVMNACASLAV 440
Query: 348 LSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMING 407
G++I+ + +G + S IHM+++ G ++ A F+ + D+ WSA+I+
Sbjct: 441 ARTGEQIQCFATKSGFGRFTAMGNSCIHMYARSGDVHAAVRRFQEMESHDIVSWSAVISS 500
Query: 408 YAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIE 467
+A HG AL F +M + + P+ + + +L+ACSH G+VD+GL ++++M+ + +
Sbjct: 501 HAQHGCARDALRFFNEMVDAK-VVPNEITFLGVLTACSHGGLVDEGLKYYETMKEEYALS 559
Query: 468 PSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKN 527
P+I+H C+VDLLGRAGR A I + + +W LL++C H ++E G+ A
Sbjct: 560 PTIKHCTCVVDLLGRAGRLADAEAFIRDSIFHDEPVIWRSLLASCRIHRDMERGQLVADR 619
Query: 528 LLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVA 587
++ L P S+ +Y+ + N++ AG A+ R +M +R + KEPG S +E+ V FVA
Sbjct: 620 IMELQPSSSASYVNLYNIYLDAGELSLASKIRDVMKERGVKKEPGLSWIELRSGVHSFVA 679
Query: 588 GDRSHHLSVDIRKTLKELHIKL 609
GD+SH S I L E+ K+
Sbjct: 680 GDKSHPESNAIYSKLAEMLSKI 701
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 106/199 (53%), Gaps = 4/199 (2%)
Query: 250 ALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQ 309
A ++H+ ++++ + L N L++ Y + G ARR+ D + + + +I Y++
Sbjct: 33 AAAVHAHIVRAHPSPSLFLRNTLLAAYCRLGGH--ARRLLDEMPRTNAVSFNLLIDAYSR 90
Query: 310 LGYPSEAVNLFKRLLKTS-VRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQ 368
G P ++ F R +++ VR + T A L+AC+ G L +GK + VL G+
Sbjct: 91 AGQPEASLETFARARRSAGVRADRFTYAAALAACSRAGRLREGKAVHALSVLEGIAGGVF 150
Query: 369 VQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVE 428
V SL+ M+++CG + +A++VF+ ++D W+A+++GY G D L +F M+
Sbjct: 151 VSNSLVSMYARCGDMGQARQVFDAADERDDVSWNALVSGYVRAGAQDDMLRVFAMMRR-S 209
Query: 429 GLKPDAVVYTSILSACSHS 447
G+ ++ S++ C+ S
Sbjct: 210 GIGLNSFALGSVIKCCAGS 228
>gi|255544622|ref|XP_002513372.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223547280|gb|EEF48775.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 597
Score = 327 bits (837), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 168/557 (30%), Positives = 315/557 (56%), Gaps = 9/557 (1%)
Query: 26 VHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSR 85
H +S + +L+ C + G +HSH+++ GF + + T LI Y K + +++R
Sbjct: 33 THLSSSLYMKILQLCIETEDLKQGCLIHSHIIRNGFDSNLHLSTKLIIFYVKFGETINAR 92
Query: 86 KVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCS- 144
KV D MP R +VVSW + IS +++ +A+LV +M G+ + T+ SV+ C+
Sbjct: 93 KVFDRMPER--NVVSWTAQISGYAKNGHYQDALLVFSQMGRAGVRANQFTYGSVLRACTG 150
Query: 145 ---FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTT 201
+G+ +H C+ K + N + + ++++ +++K G + +AR +F+ + E +VSW
Sbjct: 151 LRCLERGMQIHGCIQKNRFIGN-LFVQSALVDLHSKCGNMEDARYLFETMSERDVVSWNA 209
Query: 202 IIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSG 261
+IGGY +++F + M VTPD +++ ++ NL +H ++++ G
Sbjct: 210 VIGGYAAQDFNDDSFRMFYSMMGEGVTPDCFTLGSVLKASSRANNLIKVCQIHGIIIQLG 269
Query: 262 YNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYA-QLGYPSEAVNLF 320
+ + L+ L+ Y K ++ A ++ ++L+K V +T+++ GYA + Y EA++LF
Sbjct: 270 FGSHIDLNGSLIDAYAKSEGMKSASALYKSMLKKDVISFTAIMTGYARKCSYSREALDLF 329
Query: 321 KRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKC 380
K + + ++ T T L+ CA++ SLS G++I + + +L+ M++K
Sbjct: 330 KDMQHIFMEIDDVTFCTMLNVCADIASLSIGRQIHALAIKYKPSYDVATGNALVDMYAKS 389
Query: 381 GRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSI 440
G I A F + +K++ W+++I GY HG G +A+ L+ KM++ EGLKP+ + + S+
Sbjct: 390 GEIEDATRAFYEMKEKNVISWTSLITGYGKHGYGHEAIALYKKMEY-EGLKPNDITFLSL 448
Query: 441 LSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEV 500
L ACSHSG+ +G F +M + + I P EHY C++DL R G+ + A I +M ++
Sbjct: 449 LFACSHSGLTGEGWECFNNMITKYNILPRAEHYSCMIDLFARGGQLEEAYNMICKMNIKP 508
Query: 501 QAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARG 560
+ +W +L AC + ++ LGE AA +LL ++P ++ NY+++A ++ ++G W +A R
Sbjct: 509 NSSLWGAILGACSIYGHMSLGEVAATHLLRMDPENSANYVVLAGIYAASGSWDKACRMRN 568
Query: 561 LMDDRRLTKEPGWSQVE 577
LM+ R L K PG+S ++
Sbjct: 569 LMEYRSLKKIPGYSIIQ 585
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 128/457 (28%), Positives = 224/457 (49%), Gaps = 42/457 (9%)
Query: 2 IRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGF 61
I NG +++ L +S M + GV N FT+ VL+AC + + G ++H + K F
Sbjct: 110 ISGYAKNGHYQDALLVFSQMGRAGVRANQFTYGSVLRACTGLRCLERGMQIHGCIQKNRF 169
Query: 62 QQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVL 121
+ FVQ+ L+D++SKC + +R + + M R VVSWN++I ++ ND++ +
Sbjct: 170 IGNLFVQSALVDLHSKCGNMEDARYLFETMSE--RDVVSWNAVIGGYAAQDFNDDSFRMF 227
Query: 122 KEMWVLGLELSASTFVSVVSGCSFRQGI----SMHCCVYKLGLLNNEIPLANSVMSMYAK 177
M G+ T SV+ S + +H + +LG + I L S++ YAK
Sbjct: 228 YSMMGEGVTPDCFTLGSVLKASSRANNLIKVCQIHGIIIQLG-FGSHIDLNGSLIDAYAK 286
Query: 178 FGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVN-EAFGLCNQMRRMSVTPDLVVFLN 236
+ A +++ + + ++S+T I+ GY + + EA L M+ + + D V F
Sbjct: 287 SEGMKSASALYKSMLKKDVISFTAIMTGYARKCSYSREALDLFKDMQHIFMEIDDVTFCT 346
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
++ CA + +L + +H+L +K + + N LV MY K G++E A R F + EK+
Sbjct: 347 MLNVCADIASLSIGRQIHALAIKYKPSYDVATGNALVDMYAKSGEIEDATRAFYEMKEKN 406
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEE 356
V WTS+I GY + GY EA+ L+K++ ++PN+ T + L AC+ G +G E
Sbjct: 407 VISWTSLITGYGKHGYGHEAIALYKKMEYEGLKPNDITFLSLLFACSHSGLTGEGWE--- 463
Query: 357 YIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQ 416
+M +K + +A+ +S MI+ +A G ++
Sbjct: 464 ---------------CFNNMITKYNILPRAEH------------YSCMIDLFARGGQLEE 496
Query: 417 ALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDG 453
A N+ KM +KP++ ++ +IL ACS G + G
Sbjct: 497 AYNMICKMN----IKPNSSLWGAILGACSIYGHMSLG 529
>gi|359475985|ref|XP_002281998.2| PREDICTED: pentatricopeptide repeat-containing protein At4g33170
[Vitis vinifera]
Length = 1580
Score = 327 bits (837), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 183/598 (30%), Positives = 329/598 (55%), Gaps = 9/598 (1%)
Query: 29 NSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVL 88
++ T +VL A A + + GK+VH +K G D V L++MYSK +R+V
Sbjct: 903 DAVTLLVVLAAVAGTDDLELGKQVHGIAVKSGLDSDVSVANSLVNMYSKMGCAYFAREVF 962
Query: 89 DEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCS-FRQ 147
++M + ++SWNS+IS+ +++ L +E++ + ++ GL+ T SV+ CS
Sbjct: 963 NDM--KHLDLISWNSMISSCAQSSLEEESVNLFIDLLHEGLKPDHFTLASVLRACSSLID 1020
Query: 148 GISM----HCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTII 203
G+++ H K G + + +A +++ +Y+K GK+ EA +F + + W ++
Sbjct: 1021 GLNISRQIHVHALKTGNIADSF-VATTLIDVYSKSGKMEEAEFLFQNKDDLDLACWNAMM 1079
Query: 204 GGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYN 263
GY+ + +A L + + + D + C + L +H+ +K+G++
Sbjct: 1080 FGYIIGNDGKKALELFSLIHKSGEKSDQITLATAAKACGCLVLLDQGKQIHAHAIKAGFD 1139
Query: 264 NEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRL 323
++ +++ ++ MY KCGD+ A VF+ + WTSMI G G +A+ ++ R+
Sbjct: 1140 SDLHVNSGILDMYIKCGDMVNAGIVFNYISAPDDVAWTSMISGCVDNGNEDQALRIYHRM 1199
Query: 324 LKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRI 383
++ V P+E T AT + A + + +L +G+++ ++ S+ V TSL+ M++KCG I
Sbjct: 1200 RQSRVMPDEYTFATLIKASSCVTALEQGRQLHANVIKLDCVSDPFVGTSLVDMYAKCGNI 1259
Query: 384 NKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSA 443
A +F+++ +++A+W+AM+ G A HG ++A+NLF M+ G++PD V + ILSA
Sbjct: 1260 EDAYRLFKKMNVRNIALWNAMLVGLAQHGNAEEAVNLFKSMKS-HGIEPDRVSFIGILSA 1318
Query: 444 CSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQ 503
CSH+G+ + + SM +++GIEP IEHY CLVD LGRAG A K I MP + A
Sbjct: 1319 CSHAGLTSEAYEYLHSMPNDYGIEPEIEHYSCLVDALGRAGLVQEADKVIETMPFKASAS 1378
Query: 504 VWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMD 563
+ LL AC +VE G+ A L L P + Y+L++N++ +A W + AR +M
Sbjct: 1379 INRALLGACRIQGDVETGKRVAARLFALEPFDSAAYVLLSNIYAAANRWDDVTDARKMMK 1438
Query: 564 DRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKELHIKLLEAGYIAEADIV 621
+ + K+PG+S +++ + +FV DRSH + I ++E+ + E GY+ + + V
Sbjct: 1439 RKNVKKDPGFSWIDVKNMLHLFVVDDRSHPQADIIYDKVEEMMKTIREDGYVPDTEFV 1496
Score = 175 bits (443), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 143/525 (27%), Positives = 239/525 (45%), Gaps = 52/525 (9%)
Query: 6 TNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDA 65
+N+G+ +E L + + + T VLK C N +W + VH + +K+G + D
Sbjct: 703 SNDGNAQEGLHLFRLLRASLGSTTRMTLAPVLKLCLNSGCLWAAEGVHGYAIKIGLEWDV 762
Query: 66 FVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMW 125
FV L+++YSKC +R + D M R R VV WN ++ + + L EA + E
Sbjct: 763 FVSGALVNIYSKCGRMRDARLLFDWM--RERDVVLWNMMLKGYVQLGLEKEAFQLFSEFH 820
Query: 126 VLGL---ELSASTFVSVVSGCSFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVN 182
GL E S ++ VS ++ +G LA+ V + AK +
Sbjct: 821 RSGLRPDEFSVQLILNGVSEVNWDEGKW----------------LADQVQAYAAKLSLSD 864
Query: 183 EARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCA 242
+ +F W + + G+ A M +++ D V L ++ A
Sbjct: 865 DNPDVF---------CWNKKLSECLWAGDNWGAIECFVNMNGLNIDYDAVTLLVVLAAVA 915
Query: 243 QVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTS 302
+L L +H + +KSG +++ + N LV+MY+K G AR VF+ + + W S
Sbjct: 916 GTDDLELGKQVHGIAVKSGLDSDVSVANSLVNMYSKMGCAYFAREVFNDMKHLDLISWNS 975
Query: 303 MIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAEL-GSLSKGKEIEEYIVLN 361
MI AQ E+VNLF LL ++P+ TLA+ L AC+ L L+ ++I + +
Sbjct: 976 MISSCAQSSLEEESVNLFIDLLHEGLKPDHFTLASVLRACSSLIDGLNISRQIHVHALKT 1035
Query: 362 GLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLF 421
G ++ V T+LI ++SK G++ +A+ +F+ D DLA W+AM+ GY I G +AL LF
Sbjct: 1036 GNIADSFVATTLIDVYSKSGKMEEAEFLFQNKDDLDLACWNAMMFGYIIGNDGKKALELF 1095
Query: 422 YKMQHVEGLKPDAVVYTSILSACSHSGMVDDG---------LSFFKSMQSNFGIEPSIEH 472
+ H G K D + + AC ++D G F + N GI ++
Sbjct: 1096 -SLIHKSGEKSDQITLATAAKACGCLVLLDQGKQIHAHAIKAGFDSDLHVNSGI---LDM 1151
Query: 473 YLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHN 517
Y+ D++ F+ P +V W ++S C+ + N
Sbjct: 1152 YIKCGDMVNAGIVFNYI-----SAPDDV---AWTSMISGCVDNGN 1188
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 112/407 (27%), Positives = 203/407 (49%), Gaps = 19/407 (4%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACAN-INSIWDGKRVHSHVLKV 59
MI + + EE+++ + +L G+ + FT VL+AC++ I+ + +++H H LK
Sbjct: 976 MISSCAQSSLEEESVNLFIDLLHEGLKPDHFTLASVLRACSSLIDGLNISRQIHVHALKT 1035
Query: 60 GFQQDAFVQTGLIDMYSKC-----SDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLN 114
G D+FV T LID+YSK ++F+ K D++ + WN+++ +
Sbjct: 1036 GNIADSFVATTLIDVYSKSGKMEEAEFLFQNK--DDL-----DLACWNAMMFGYIIGNDG 1088
Query: 115 DEAILVLKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANS 170
+A+ + + G + T + C QG +H K G ++++ + +
Sbjct: 1089 KKALELFSLIHKSGEKSDQITLATAAKACGCLVLLDQGKQIHAHAIKAG-FDSDLHVNSG 1147
Query: 171 VMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPD 230
++ MY K G + A +F+ I V+WT++I G V+ GN ++A + ++MR+ V PD
Sbjct: 1148 ILDMYIKCGDMVNAGIVFNYISAPDDVAWTSMISGCVDNGNEDQALRIYHRMRQSRVMPD 1207
Query: 231 LVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFD 290
F LI + V L +H+ ++K ++ + LV MY KCG++E A R+F
Sbjct: 1208 EYTFATLIKASSCVTALEQGRQLHANVIKLDCVSDPFVGTSLVDMYAKCGNIEDAYRLFK 1267
Query: 291 AVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSK 350
+ +++ LW +M+ G AQ G EAVNLFK + + P+ + LSAC+ G S+
Sbjct: 1268 KMNVRNIALWNAMLVGLAQHGNAEEAVNLFKSMKSHGIEPDRVSFIGILSACSHAGLTSE 1327
Query: 351 GKEIEEYIVLN-GLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDK 396
E + + G+E + + L+ + G + +A +V E +P K
Sbjct: 1328 AYEYLHSMPNDYGIEPEIEHYSCLVDALGRAGLVQEADKVIETMPFK 1374
Score = 145 bits (365), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 113/423 (26%), Positives = 205/423 (48%), Gaps = 46/423 (10%)
Query: 36 VLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRL 95
+L+ + +++ GK H+ ++ G D F+ L+ MYSKC S+R+V D P
Sbjct: 627 LLRTAISTHNLLLGKCTHARIVVSGSAGDHFLSNNLLTMYSKCGSLSSARQVFDTTPE-- 684
Query: 96 RSVVSWNSIISAHSRACLNDE--AILVLKEMWVLGLELSASTFVSVV--------SGCSF 145
R +V+WN+I+ A++ + +++ A L +L L ++T +++ SGC +
Sbjct: 685 RDLVTWNAILGAYAASVDSNDGNAQEGLHLFRLLRASLGSTTRMTLAPVLKLCLNSGCLW 744
Query: 146 RQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGG 205
+H K+G L ++ ++ +++++Y+K G++ +AR +FD + E +V W ++ G
Sbjct: 745 -AAEGVHGYAIKIG-LEWDVFVSGALVNIYSKCGRMRDARLLFDWMRERDVVLWNMMLKG 802
Query: 206 YVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVG---NLFLALSMHSLLLKSGY 262
YV +G EAF L ++ R + PD ++ G ++V +LA + + K
Sbjct: 803 YVQLGLEKEAFQLFSEFHRSGLRPDEFSVQLILNGVSEVNWDEGKWLADQVQAYAAKLSL 862
Query: 263 NNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKR 322
++++P VF W + G A+ F
Sbjct: 863 SDDNP----------------------------DVFCWNKKLSECLWAGDNWGAIECFVN 894
Query: 323 LLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGR 382
+ ++ + TL L+A A L GK++ V +GL+S+ V SL++M+SK G
Sbjct: 895 MNGLNIDYDAVTLLVVLAAVAGTDDLELGKQVHGIAVKSGLDSDVSVANSLVNMYSKMGC 954
Query: 383 INKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILS 442
A+EVF + DL W++MI+ A + ++++NLF + H EGLKPD S+L
Sbjct: 955 AYFAREVFNDMKHLDLISWNSMISSCAQSSLEEESVNLFIDLLH-EGLKPDHFTLASVLR 1013
Query: 443 ACS 445
ACS
Sbjct: 1014 ACS 1016
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 93/348 (26%), Positives = 162/348 (46%), Gaps = 69/348 (19%)
Query: 167 LANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYV-----NVGNVNEAFGLCNQ 221
L+N++++MY+K G ++ AR +FD E +V+W I+G Y N GN E L
Sbjct: 658 LSNNLLTMYSKCGSLSSARQVFDTTPERDLVTWNAILGAYAASVDSNDGNAQEGLHLFRL 717
Query: 222 MR-------RMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVS 274
+R RM++ P L + LN GC L+ A +H +K G + + LV+
Sbjct: 718 LRASLGSTTRMTLAPVLKLCLNS--GC-----LWAAEGVHGYAIKIGLEWDVFVSGALVN 770
Query: 275 MYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEAT 334
+Y+KCG + AR +FD + E+ V LW M+ GY QLG EA LF ++ +RP+E +
Sbjct: 771 IYSKCGRMRDARLLFDWMRERDVVLWNMMLKGYVQLGLEKEAFQLFSEFHRSGLRPDEFS 830
Query: 335 LATTLSACAELG------------------SLSKGKE---------------------IE 355
+ L+ +E+ SLS IE
Sbjct: 831 VQLILNGVSEVNWDEGKWLADQVQAYAAKLSLSDDNPDVFCWNKKLSECLWAGDNWGAIE 890
Query: 356 EYIVLNGLESNRQVQTSLIHMFSKCGR--INKAKEVF----ERVPDKDLAVWSAMINGYA 409
++ +NGL + T L+ + + G + K+V + D D++V ++++N Y+
Sbjct: 891 CFVNMNGLNIDYDAVTLLVVLAAVAGTDDLELGKQVHGIAVKSGLDSDVSVANSLVNMYS 950
Query: 410 IHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFF 457
G A +F M+H+ D + + S++S+C+ S + ++ ++ F
Sbjct: 951 KMGCAYFAREVFNDMKHL-----DLISWNSMISSCAQSSLEEESVNLF 993
>gi|449453750|ref|XP_004144619.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Cucumis sativus]
gi|449506934|ref|XP_004162888.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Cucumis sativus]
Length = 1067
Score = 327 bits (837), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 203/622 (32%), Positives = 341/622 (54%), Gaps = 24/622 (3%)
Query: 12 EETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKR----VHSHVLKVGF-QQDAF 66
EE + + M + V N ++ ++L A + + +GKR VH+ +++ G
Sbjct: 367 EEAVELFMEM-KDSVELNPNSYMIILTAFPEFHVLENGKRKGSEVHAFLIRSGLLNAQIA 425
Query: 67 VQTGLIDMYSKC---SDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKE 123
+ GLI+MY+KC +D +++D + V+WNS+I+ + EA+ +E
Sbjct: 426 IGNGLINMYAKCGAINDACVVFRLMDN-----KDSVTWNSMITGLDQNKQFLEAVKTFQE 480
Query: 124 MWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFG 179
M L S T +S +S C+ G +HC KLGL + ++ ++N+++++Y + G
Sbjct: 481 MRRTELYPSNFTMISALSSCASLGWISVGEQLHCEGLKLGL-DLDVSVSNALLALYGECG 539
Query: 180 KVNEARSIFDEIGETSIVSWTTIIGGYVNV-GNVNEAFGLCNQMRRMSVTPDLVVFLNLI 238
V E + F + + VSW ++IG + ++ EA M R P+ V F+ ++
Sbjct: 540 YVKECQKAFSLMLDYDHVSWNSLIGALADSEPSMLEAVESFLVMMRAGWDPNRVTFITIL 599
Query: 239 LGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVF 298
+ + L +H+L+LK + ++N L++ Y KCGD+ +F + ++
Sbjct: 600 AAVSSLSLHELGKQIHALVLKRNVAADTAIENALLACYGKCGDMGYCENIFSRMSDRQDE 659
Query: 299 L-WTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEY 357
+ W SMI GY +A+++ +++ R + T AT LSACA + +L +G E+
Sbjct: 660 VSWNSMISGYIHNELLPKAMDMVWFMMQKGQRLDGFTFATVLSACATVATLERGMEVHGC 719
Query: 358 IVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQA 417
V LES+ + ++L+ M++KCGRI+ A FE +P ++L W++MI+GYA HG G ++
Sbjct: 720 SVRACLESDIVIGSALVDMYAKCGRIDYASRFFEMMPARNLYSWNSMISGYARHGHGTKS 779
Query: 418 LNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLV 477
L+LF +M+ ++G PD V + +LSACSH+G+V++G S F SM +G+ P +EH+ C+V
Sbjct: 780 LDLFAQMK-LQGPLPDHVTFVGVLSACSHAGLVNEGFSHFDSMSEIYGLAPRMEHFSCMV 838
Query: 478 DLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHH--NVELGEYAAKNLLTLNPGS 535
DLLGR G + +++MPV+ +W +L AC + + N LG AA+ LL + P +
Sbjct: 839 DLLGRVGELNKMEDFLNQMPVKPNVLIWRTVLGACCRANGRNTALGRRAAEMLLEMEPTN 898
Query: 536 TGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLS 595
NYIL++N++ S G W + A R M + KE G S V + V VFVAGD+SH
Sbjct: 899 AVNYILLSNMYASGGKWDDVAKTRVAMRKAFVKKEAGCSWVTMKDGVHVFVAGDKSHPEK 958
Query: 596 VDIRKTLKELHIKLLEAGYIAE 617
I + LKEL+ K+ AGYI E
Sbjct: 959 DLIYEKLKELNGKMRLAGYIPE 980
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 125/424 (29%), Positives = 212/424 (50%), Gaps = 23/424 (5%)
Query: 48 DGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISA 107
D + +H + K GF D F+ LI++Y++ D S RKV DEMP LR++VSW+ +IS
Sbjct: 91 DAEELHLQLFKNGFVNDLFLCNTLINIYARVGDLGSGRKVFDEMP--LRNLVSWSCLISG 148
Query: 108 HSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCS------FRQGISMHCCVYKLGLL 161
++R + +EA + ++M G + F SV+ C + G+ +H + K +
Sbjct: 149 YTRNRMPNEACELFRKMVSDGFMPNHYAFGSVIRACQECGEYGLKFGMQIHGLMSKTQYV 208
Query: 162 NNEIPLANSVMSMYAK-FGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCN 220
N++ +N ++SMY G V+ AR FD I ++VS ++I Y G+ AF + +
Sbjct: 209 -NDVTASNVLISMYGNALGMVDYARRAFDSIWPRNLVSLNSMISVYCQRGDAVSAFDIFS 267
Query: 221 QMRRM----SVTPDLVVFLNLILGCAQVGN--LFLALSMHSLLLKSGYNNEDPLDNLLVS 274
M++ + P+ F +LI + N L L + + + KSG+ ++ + + LVS
Sbjct: 268 TMQKEVMGDGLKPNEYTFGSLISATCSLANSGLVLLEQLLTRVEKSGFLHDLYVGSALVS 327
Query: 275 MYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEAT 334
+ K G + A+ +F + ++V +I G + EAV LF +K SV N +
Sbjct: 328 GFAKAGSIGYAKNIFQKMSYRNVVSLNGLIIGLVRQKRGEEAVELFME-MKDSVELNPNS 386
Query: 335 LATTLSACAELGSLSKGK----EIEEYIVLNG-LESNRQVQTSLIHMFSKCGRINKAKEV 389
L+A E L GK E+ +++ +G L + + LI+M++KCG IN A V
Sbjct: 387 YMIILTAFPEFHVLENGKRKGSEVHAFLIRSGLLNAQIAIGNGLINMYAKCGAINDACVV 446
Query: 390 FERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGM 449
F + +KD W++MI G + +A+ F +M+ E L P S LS+C+ G
Sbjct: 447 FRLMDNKDSVTWNSMITGLDQNKQFLEAVKTFQEMRRTE-LYPSNFTMISALSSCASLGW 505
Query: 450 VDDG 453
+ G
Sbjct: 506 ISVG 509
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 115/505 (22%), Positives = 228/505 (45%), Gaps = 57/505 (11%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI N F E + T+ M +T ++ ++FT L +CA++ I G+++H LK+G
Sbjct: 461 MITGLDQNKQFLEAVKTFQEMRRTELYPSNFTMISALSSCASLGWISVGEQLHCEGLKLG 520
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLND----- 115
D V L+ +Y +C +K M VSWNS+I A L D
Sbjct: 521 LDLDVSVSNALLALYGECGYVKECQKAFSLMLD--YDHVSWNSLIGA-----LADSEPSM 573
Query: 116 -EAILVLKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANS 170
EA+ M G + + TF+++++ S G +H V K + + + N+
Sbjct: 574 LEAVESFLVMMRAGWDPNRVTFITILAAVSSLSLHELGKQIHALVLKRNVA-ADTAIENA 632
Query: 171 VMSMYAKFGKVNEARSIFDEIGETSI-VSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTP 229
+++ Y K G + +IF + + VSW ++I GY++ + +A + M +
Sbjct: 633 LLACYGKCGDMGYCENIFSRMSDRQDEVSWNSMISGYIHNELLPKAMDMVWFMMQKGQRL 692
Query: 230 DLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVF 289
D F ++ CA V L + +H +++ ++ + + LV MY KCG ++ A R F
Sbjct: 693 DGFTFATVLSACATVATLERGMEVHGCSVRACLESDIVIGSALVDMYAKCGRIDYASRFF 752
Query: 290 DAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLS 349
+ + ++++ W SMI GYA+ G+ +++++LF ++ P+ T LSAC+ G ++
Sbjct: 753 EMMPARNLYSWNSMISGYARHGHGTKSLDLFAQMKLQGPLPDHVTFVGVLSACSHAGLVN 812
Query: 350 KG-KEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGY 408
+G + + GL + + ++ + + G +NK ++ ++P
Sbjct: 813 EGFSHFDSMSEIYGLAPRMEHFSCMVDLLGRVGELNKMEDFLNQMP-------------- 858
Query: 409 AIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEP 468
+KP+ +++ ++L AC + + L ++ + +EP
Sbjct: 859 ---------------------VKPNVLIWRTVLGACCRANGRNTALG-RRAAEMLLEMEP 896
Query: 469 S-IEHYLCLVDLLGRAGRFDLALKT 492
+ +Y+ L ++ G++D KT
Sbjct: 897 TNAVNYILLSNMYASGGKWDDVAKT 921
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 89/320 (27%), Positives = 166/320 (51%), Gaps = 12/320 (3%)
Query: 143 CSFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTI 202
C + +H ++K G +N ++ L N+++++YA+ G + R +FDE+ ++VSW+ +
Sbjct: 87 CGSKDAEELHLQLFKNGFVN-DLFLCNTLINIYARVGDLGSGRKVFDEMPLRNLVSWSCL 145
Query: 203 IGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSM--HSLLLKS 260
I GY NEA L +M P+ F ++I C + G L M H L+ K+
Sbjct: 146 ISGYTRNRMPNEACELFRKMVSDGFMPNHYAFGSVIRACQECGEYGLKFGMQIHGLMSKT 205
Query: 261 GYNNEDPLDNLLVSMYTKC-GDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNL 319
Y N+ N+L+SMY G ++ ARR FD++ +++ SMI Y Q G A ++
Sbjct: 206 QYVNDVTASNVLISMYGNALGMVDYARRAFDSIWPRNLVSLNSMISVYCQRGDAVSAFDI 265
Query: 320 F----KRLLKTSVRPNEATLATTLSACAELGS--LSKGKEIEEYIVLNGLESNRQVQTSL 373
F K ++ ++PNE T + +SA L + L +++ + +G + V ++L
Sbjct: 266 FSTMQKEVMGDGLKPNEYTFGSLISATCSLANSGLVLLEQLLTRVEKSGFLHDLYVGSAL 325
Query: 374 IHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPD 433
+ F+K G I AK +F+++ +++ + +I G G++A+ LF +M+ L P+
Sbjct: 326 VSGFAKAGSIGYAKNIFQKMSYRNVVSLNGLIIGLVRQKRGEEAVELFMEMKDSVELNPN 385
Query: 434 AVVYTSILSACSHSGMVDDG 453
+ Y IL+A ++++G
Sbjct: 386 S--YMIILTAFPEFHVLENG 403
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 125/475 (26%), Positives = 219/475 (46%), Gaps = 46/475 (9%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINS--IWDGKRVHSHVLK 58
+I T N E + M+ G N + F V++AC + G ++H + K
Sbjct: 145 LISGYTRNRMPNEACELFRKMVSDGFMPNHYAFGSVIRACQECGEYGLKFGMQIHGLMSK 204
Query: 59 VGFQQDAFVQTGLIDMYSKCSDFVS-SRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEA 117
+ D LI MY V +R+ D + R++VS NS+IS + C +A
Sbjct: 205 TQYVNDVTASNVLISMYGNALGMVDYARRAFDS--IWPRNLVSLNSMISVY---CQRGDA 259
Query: 118 ILVL-------KEMWVLGLELSASTFVSVVSG-CSF-RQGI----SMHCCVYKLGLLNNE 164
+ KE+ GL+ + TF S++S CS G+ + V K G L ++
Sbjct: 260 VSAFDIFSTMQKEVMGDGLKPNEYTFGSLISATCSLANSGLVLLEQLLTRVEKSGFL-HD 318
Query: 165 IPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRR 224
+ + ++++S +AK G + A++IF ++ ++VS +I G V EA L +M+
Sbjct: 319 LYVGSALVSGFAKAGSIGYAKNIFQKMSYRNVVSLNGLIIGLVRQKRGEEAVELFMEMKD 378
Query: 225 ------------MSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSG-YNNEDPLDNL 271
++ P+ V N ++V H+ L++SG N + + N
Sbjct: 379 SVELNPNSYMIILTAFPEFHVLENGKRKGSEV---------HAFLIRSGLLNAQIAIGNG 429
Query: 272 LVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPN 331
L++MY KCG + A VF + K W SMI G Q EAV F+ + +T + P+
Sbjct: 430 LINMYAKCGAINDACVVFRLMDNKDSVTWNSMITGLDQNKQFLEAVKTFQEMRRTELYPS 489
Query: 332 EATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFE 391
T+ + LS+CA LG +S G+++ + GL+ + V +L+ ++ +CG + + ++ F
Sbjct: 490 NFTMISALSSCASLGWISVGEQLHCEGLKLGLDLDVSVSNALLALYGECGYVKECQKAFS 549
Query: 392 RVPDKDLAVWSAMINGYAIHGMGD-QALNLFYKMQHVEGLKPDAVVYTSILSACS 445
+ D D W+++I A +A+ F M G P+ V + +IL+A S
Sbjct: 550 LMLDYDHVSWNSLIGALADSEPSMLEAVESFLVMMRA-GWDPNRVTFITILAAVS 603
>gi|225432698|ref|XP_002278762.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14820
[Vitis vinifera]
gi|297737070|emb|CBI26271.3| unnamed protein product [Vitis vinifera]
Length = 727
Score = 327 bits (837), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 167/548 (30%), Positives = 297/548 (54%), Gaps = 37/548 (6%)
Query: 102 NSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYK 157
N + SR+ ++ +LV + M GL + +F ++ S +G+ +H K
Sbjct: 91 NRFLRELSRSEEPEKTLLVYERMRTQGLAVDRFSFPPLLKALSRVKSLVEGLEIHGLAAK 150
Query: 158 LGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFG 217
LG +++ + ++ MYA G++ EAR +FD++ +V+W+ +I GY G N+A
Sbjct: 151 LGF-DSDPFVQTGLVRMYAACGRIAEARLMFDKMFHRDVVTWSIMIDGYCQSGLFNDALL 209
Query: 218 LCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYT 277
L +M+ +V PD ++ ++ C + GNL +H ++++ + L + LV+MY
Sbjct: 210 LFEEMKNYNVEPDEMMLSTVLSACGRAGNLSYGKMIHDFIMENNIVVDPHLQSALVTMYA 269
Query: 278 KCGDLELA-------------------------------RRVFDAVLEKSVFLWTSMIGG 306
CG ++LA R VF+ +++K + W++MI G
Sbjct: 270 SCGSMDLALNLFEKMTPKNLVASTAMVTGYSKLGQIENARSVFNQMVKKDLVCWSAMISG 329
Query: 307 YAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESN 366
YA+ P EA+NLF + ++P++ T+ + ++ACA LG+L + K I ++ NG
Sbjct: 330 YAESDSPQEALNLFNEMQSLGIKPDQVTMLSVITACAHLGALDQAKWIHLFVDKNGFGGA 389
Query: 367 RQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQH 426
+ +LI M++KCG + +A+ +F+++P K++ W+ MI+ +A+HG AL F++M+
Sbjct: 390 LPINNALIEMYAKCGSLERARRIFDKMPRKNVISWTCMISAFAMHGDAGSALRFFHQMED 449
Query: 427 VEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRF 486
E ++P+ + + +L ACSH+G+V++G F SM + I P HY C+VDL GRA
Sbjct: 450 -ENIEPNGITFVGVLYACSHAGLVEEGRKIFYSMINEHNITPKHVHYGCMVDLFGRANLL 508
Query: 487 DLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLF 546
AL+ + MP+ +W L++AC H +ELGE+AAK LL L+P G ++ ++N++
Sbjct: 509 REALELVEAMPLAPNVIIWGSLMAACRVHGEIELGEFAAKRLLELDPDHDGAHVFLSNIY 568
Query: 547 TSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKELH 606
A W++ R LM + ++KE G S+ E++ + F+ DRSH + +I + L E+
Sbjct: 569 AKARRWEDVGQVRKLMKHKGISKERGCSRFELNNEIHEFLVADRSHKHADEIYEKLYEVV 628
Query: 607 IKLLEAGY 614
KL GY
Sbjct: 629 SKLKLVGY 636
Score = 215 bits (547), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 125/447 (27%), Positives = 226/447 (50%), Gaps = 38/447 (8%)
Query: 2 IRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGF 61
+R + + E+TL Y M G+ + F+FP +LKA + + S+ +G +H K+GF
Sbjct: 94 LRELSRSEEPEKTLLVYERMRTQGLAVDRFSFPPLLKALSRVKSLVEGLEIHGLAAKLGF 153
Query: 62 QQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVL 121
D FVQTGL+ MY+ C +R + D+M R VV+W+ +I + ++ L ++A+L+
Sbjct: 154 DSDPFVQTGLVRMYAACGRIAEARLMFDKM--FHRDVVTWSIMIDGYCQSGLFNDALLLF 211
Query: 122 KEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGLLNN---EIPLANSVMSMYA-- 176
+EM +E +V+S C +S ++ + NN + L +++++MYA
Sbjct: 212 EEMKNYNVEPDEMMLSTVLSACGRAGNLSYGKMIHDFIMENNIVVDPHLQSALVTMYASC 271
Query: 177 -----------------------------KFGKVNEARSIFDEIGETSIVSWTTIIGGYV 207
K G++ ARS+F+++ + +V W+ +I GY
Sbjct: 272 GSMDLALNLFEKMTPKNLVASTAMVTGYSKLGQIENARSVFNQMVKKDLVCWSAMISGYA 331
Query: 208 NVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDP 267
+ EA L N+M+ + + PD V L++I CA +G L A +H + K+G+ P
Sbjct: 332 ESDSPQEALNLFNEMQSLGIKPDQVTMLSVITACAHLGALDQAKWIHLFVDKNGFGGALP 391
Query: 268 LDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTS 327
++N L+ MY KCG LE ARR+FD + K+V WT MI +A G A+ F ++ +
Sbjct: 392 INNALIEMYAKCGSLERARRIFDKMPRKNVISWTCMISAFAMHGDAGSALRFFHQMEDEN 451
Query: 328 VRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTS-LIHMFSKCGRINKA 386
+ PN T L AC+ G + +G++I ++ + + V ++ +F + + +A
Sbjct: 452 IEPNGITFVGVLYACSHAGLVEEGRKIFYSMINEHNITPKHVHYGCMVDLFGRANLLREA 511
Query: 387 KEVFERVP-DKDLAVWSAMINGYAIHG 412
E+ E +P ++ +W +++ +HG
Sbjct: 512 LELVEAMPLAPNVIIWGSLMAACRVHG 538
Score = 105 bits (261), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 66/278 (23%), Positives = 124/278 (44%), Gaps = 34/278 (12%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI +G F + L + M V + VL AC ++ GK +H +++
Sbjct: 194 MIDGYCQSGLFNDALLLFEEMKNYNVEPDEMMLSTVLSACGRAGNLSYGKMIHDFIMENN 253
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEM-PVRL------------------------ 95
D +Q+ L+ MY+ C + + ++M P L
Sbjct: 254 IVVDPHLQSALVTMYASCGSMDLALNLFEKMTPKNLVASTAMVTGYSKLGQIENARSVFN 313
Query: 96 ----RSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGC----SFRQ 147
+ +V W+++IS ++ + EA+ + EM LG++ T +SV++ C + Q
Sbjct: 314 QMVKKDLVCWSAMISGYAESDSPQEALNLFNEMQSLGIKPDQVTMLSVITACAHLGALDQ 373
Query: 148 GISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYV 207
+H V K G +P+ N+++ MYAK G + AR IFD++ +++SWT +I +
Sbjct: 374 AKWIHLFVDKNG-FGGALPINNALIEMYAKCGSLERARRIFDKMPRKNVISWTCMISAFA 432
Query: 208 NVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVG 245
G+ A +QM ++ P+ + F+ ++ C+ G
Sbjct: 433 MHGDAGSALRFFHQMEDENIEPNGITFVGVLYACSHAG 470
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 110/256 (42%), Gaps = 46/256 (17%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI + S +E L+ ++ M G+ + T V+ ACA++ ++ K +H V K G
Sbjct: 326 MISGYAESDSPQEALNLFNEMQSLGIKPDQVTMLSVITACAHLGALDQAKWIHLFVDKNG 385
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F + LI+MY+KC +R++ D+MP ++V+SW +ISA + A+
Sbjct: 386 FGGALPINNALIEMYAKCGSLERARRIFDKMP--RKNVISWTCMISAFAMHGDAGSALRF 443
Query: 121 LKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGK 180
+M +E + TFV V+ CS G
Sbjct: 444 FHQMEDENIEPNGITFVGVLYACSHA--------------------------------GL 471
Query: 181 VNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRR-------MSVTPDLVV 233
V E R IF S+++ I +V+ G + + FG N +R M + P++++
Sbjct: 472 VEEGRKIF-----YSMINEHNITPKHVHYGCMVDLFGRANLLREALELVEAMPLAPNVII 526
Query: 234 FLNLILGCAQVGNLFL 249
+ +L+ C G + L
Sbjct: 527 WGSLMAACRVHGEIEL 542
>gi|297723953|ref|NP_001174340.1| Os05g0313600 [Oryza sativa Japonica Group]
gi|222631076|gb|EEE63208.1| hypothetical protein OsJ_18018 [Oryza sativa Japonica Group]
gi|255676232|dbj|BAH93068.1| Os05g0313600 [Oryza sativa Japonica Group]
Length = 620
Score = 327 bits (837), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 171/462 (37%), Positives = 269/462 (58%), Gaps = 1/462 (0%)
Query: 161 LNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCN 220
LN+ +S++++Y+ AR +F+ I +VSW ++ Y VG E +
Sbjct: 159 LNSHDHTVHSLITIYSYLDDPGAARKVFNGIPSRDVVSWNAMMKAYGRVGMNGEVGRMLR 218
Query: 221 QM-RRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKC 279
M + +V P+ V ++ C G+L L + +G + + + LV MY KC
Sbjct: 219 DMVKDGAVVPNAVTLAVVLAACRDEGDLVLGRWVEEWSKSAGMETDSLVGSALVGMYEKC 278
Query: 280 GDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTL 339
G++ ARRVFD++++K V W +MI GYAQ G +EA++LF + K V P++ TLA L
Sbjct: 279 GEIAEARRVFDSIIDKDVVAWNAMITGYAQNGMSNEAISLFHNMKKAGVCPDKITLAGVL 338
Query: 340 SACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLA 399
SAC+ +G+L G E++ Y GL +N V T+L+ M++KCG ++KA EVF ++ K++A
Sbjct: 339 SACSAVGALELGSELDGYASCRGLYNNVYVGTALVDMYAKCGDLDKAIEVFRKMRCKNVA 398
Query: 400 VWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKS 459
W+A+I G A +G GD+A+ F M++ +GLKPD + + +LSAC H+G+V DG +F S
Sbjct: 399 SWNALICGLAFNGQGDEAIQHFELMRNEDGLKPDDITFIGVLSACVHAGLVKDGKRWFNS 458
Query: 460 MQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVE 519
+ S F I P IEHY C+VD L R+G + I ++P +V A + LL+AC K NVE
Sbjct: 459 LTSEFQIIPKIEHYSCMVDPLARSGHLEEVWDFIEKIPDKVDAVMLGALLAACRKCKNVE 518
Query: 520 LGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEID 579
+GE ++ L P ++ NY++ + ++ S+G ++A RGLM +R + K PG S VEI
Sbjct: 519 IGERVINRIIQLEPTNSWNYVVSSKIYASSGRLDDSAKMRGLMRERGVNKTPGCSWVEIS 578
Query: 580 GSVQVFVAGDRSHHLSVDIRKTLKELHIKLLEAGYIAEADIV 621
G V F AGD H + D+ + L L ++ GY+ D+V
Sbjct: 579 GKVLEFYAGDEPQHGADDMYQVLDLLVDEMRLEGYVPNLDVV 620
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 82/244 (33%), Positives = 140/244 (57%), Gaps = 3/244 (1%)
Query: 254 HSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYP 313
H+LL K N+ D + L+++Y+ D AR+VF+ + + V W +M+ Y ++G
Sbjct: 151 HALLEKIDLNSHDHTVHSLITIYSYLDDPGAARKVFNGIPSRDVVSWNAMMKAYGRVGMN 210
Query: 314 SEAVNLFKRLLKT-SVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTS 372
E + + ++K +V PN TLA L+AC + G L G+ +EE+ G+E++ V ++
Sbjct: 211 GEVGRMLRDMVKDGAVVPNAVTLAVVLAACRDEGDLVLGRWVEEWSKSAGMETDSLVGSA 270
Query: 373 LIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKP 432
L+ M+ KCG I +A+ VF+ + DKD+ W+AMI GYA +GM ++A++LF+ M+ G+ P
Sbjct: 271 LVGMYEKCGEIAEARRVFDSIIDKDVVAWNAMITGYAQNGMSNEAISLFHNMKKA-GVCP 329
Query: 433 DAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKT 492
D + +LSACS G ++ G S S G+ ++ LVD+ + G D A++
Sbjct: 330 DKITLAGVLSACSAVGALELG-SELDGYASCRGLYNNVYVGTALVDMYAKCGDLDKAIEV 388
Query: 493 IHEM 496
+M
Sbjct: 389 FRKM 392
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 104/359 (28%), Positives = 172/359 (47%), Gaps = 18/359 (5%)
Query: 53 HSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRAC 112
H+ + K+ LI +YS D ++RKV + +P R VVSWN+++ A+ R
Sbjct: 151 HALLEKIDLNSHDHTVHSLITIYSYLDDPGAARKVFNGIPSR--DVVSWNAMMKAYGRVG 208
Query: 113 LNDEAILVLKEMWVLGLEL-SASTFVSVVSGCSFRQGISMHCCV---YKLGLLNNEIPLA 168
+N E +L++M G + +A T V++ C + + V K + + +
Sbjct: 209 MNGEVGRMLRDMVKDGAVVPNAVTLAVVLAACRDEGDLVLGRWVEEWSKSAGMETDSLVG 268
Query: 169 NSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVT 228
++++ MY K G++ EAR +FD I + +V+W +I GY G NEA L + M++ V
Sbjct: 269 SALVGMYEKCGEIAEARRVFDSIIDKDVVAWNAMITGYAQNGMSNEAISLFHNMKKAGVC 328
Query: 229 PDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRV 288
PD + ++ C+ VG L L + G N + LV MY KCGDL+ A V
Sbjct: 329 PDKITLAGVLSACSAVGALELGSELDGYASCRGLYNNVYVGTALVDMYAKCGDLDKAIEV 388
Query: 289 FDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLL-KTSVRPNEATLATTLSACAELGS 347
F + K+V W ++I G A G EA+ F+ + + ++P++ T LSAC G
Sbjct: 389 FRKMRCKNVASWNALICGLAFNGQGDEAIQHFELMRNEDGLKPDDITFIGVLSACVHAGL 448
Query: 348 LSKGKEIEEYIVLNGLESNRQVQTSLIHM------FSKCGRINKAKEVFERVPDKDLAV 400
+ GK N L S Q+ + H ++ G + + + E++PDK AV
Sbjct: 449 VKDGKRW-----FNSLTSEFQIIPKIEHYSCMVDPLARSGHLEEVWDFIEKIPDKVDAV 502
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 113/231 (48%), Gaps = 9/231 (3%)
Query: 21 MLQTG-VHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCS 79
M++ G V N+ T +VL AC + + G+ V G + D+ V + L+ MY KC
Sbjct: 220 MVKDGAVVPNAVTLAVVLAACRDEGDLVLGRWVEEWSKSAGMETDSLVGSALVGMYEKCG 279
Query: 80 DFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSV 139
+ +R+V D + + VV+WN++I+ +++ +++EAI + M G+ T V
Sbjct: 280 EIAEARRVFDS--IIDKDVVAWNAMITGYAQNGMSNEAISLFHNMKKAGVCPDKITLAGV 337
Query: 140 VSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETS 195
+S CS G + GL NN + + +++ MYAK G +++A +F ++ +
Sbjct: 338 LSACSAVGALELGSELDGYASCRGLYNN-VYVGTALVDMYAKCGDLDKAIEVFRKMRCKN 396
Query: 196 IVSWTTIIGGYVNVGNVNEAFGLCNQMRRMS-VTPDLVVFLNLILGCAQVG 245
+ SW +I G G +EA MR + PD + F+ ++ C G
Sbjct: 397 VASWNALICGLAFNGQGDEAIQHFELMRNEDGLKPDDITFIGVLSACVHAG 447
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 72/144 (50%), Gaps = 3/144 (2%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI NG E +S + +M + GV + T VL AC+ + ++ G + + G
Sbjct: 302 MITGYAQNGMSNEAISLFHNMKKAGVCPDKITLAGVLSACSAVGALELGSELDGYASCRG 361
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+ +V T L+DMY+KC D + +V +M R ++V SWN++I + DEAI
Sbjct: 362 LYNNVYVGTALVDMYAKCGDLDKAIEVFRKM--RCKNVASWNALICGLAFNGQGDEAIQH 419
Query: 121 LKEMW-VLGLELSASTFVSVVSGC 143
+ M GL+ TF+ V+S C
Sbjct: 420 FELMRNEDGLKPDDITFIGVLSAC 443
>gi|357128207|ref|XP_003565766.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g33680-like [Brachypodium distachyon]
Length = 734
Score = 327 bits (837), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 180/558 (32%), Positives = 307/558 (55%), Gaps = 13/558 (2%)
Query: 64 DAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKE 123
+ FV T L++MY K ++ V DEMP R+ VSW ++++ ++ + EA + ++
Sbjct: 152 NVFVSTALLNMYCKLGLIPDAQLVFDEMP--HRNEVSWAAMVAGYAARKCSQEAFELFRQ 209
Query: 124 MWVLGL------ELSASTFVSVVS-GCSFRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
M LG E A+ +S +S G+ +H V K G++ + + NS+++MYA
Sbjct: 210 M--LGECPLHKNEFVATAVLSAISVPLGLPMGVQVHGLVVKDGMVGF-VSVENSLVTMYA 266
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K G ++ A +F+ E + ++W+ +I GY GN A + +QM P +
Sbjct: 267 KAGCMDAAFHVFESSKERNSITWSAMITGYSQNGNAESAVRMFSQMHAAGFPPTEFTLVG 326
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
++ C+ VG L H L++K G+ + + + LV MY KCG + A+ F+ E
Sbjct: 327 VLNACSDVGTLMEGKQAHGLMVKLGFEVQVYVKSALVDMYAKCGCIGDAKECFNQFSELD 386
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEE 356
+ LWT+M+ G+ Q G +A+ L+ R+ K V PN T+ + L ACA L +L GK++
Sbjct: 387 IVLWTAMVTGHVQNGEFEQALMLYARMDKEGVFPNTLTITSLLRACAGLAALEPGKQLHT 446
Query: 357 YIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQ 416
I+ G V ++L M+SKCG + VF R+P +D+ W+++I+G++ +G G+
Sbjct: 447 QILKFGFGLGASVGSALSTMYSKCGNLEDGMVVFRRMPHRDVIAWNSIISGFSQNGRGND 506
Query: 417 ALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCL 476
A+NLF +M+ +EG PD V + ++L ACSH G+VD G ++F+SM ++G+ P ++HY C+
Sbjct: 507 AINLFEEMK-LEGTAPDPVTFINVLCACSHMGLVDRGWTYFRSMIKDYGLTPRLDHYACM 565
Query: 477 VDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGST 536
VD+L RAG A I + ++ +W +L AC + ++G YA + L+ L G +
Sbjct: 566 VDILSRAGMLSEAKDFIESITIDHGTCLWRIVLGACRSLRDFDVGAYAGEKLMDLGTGDS 625
Query: 537 GNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSV 596
YIL++N++ + W + R LM ++K+PG S VE++ V VFV G++ H +
Sbjct: 626 AAYILLSNIYAAQRKWNDVERVRYLMKLVGVSKDPGCSWVELNSRVHVFVVGEQQHPDAE 685
Query: 597 DIRKTLKELHIKLLEAGY 614
I L+ L + + GY
Sbjct: 686 IINTELRRLGKHMKDEGY 703
Score = 184 bits (468), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 129/471 (27%), Positives = 229/471 (48%), Gaps = 37/471 (7%)
Query: 48 DGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFV--SSRKVLDEMPVRLRSVVSWNSII 105
DG+ +H+ LK G A V LI YS ++ V ++P R V SWNS++
Sbjct: 30 DGEALHAWALKSGSSSHAPVSNSLITFYSSFPRLFLPAAFAVFADIPAAARDVASWNSLL 89
Query: 106 S-----------AHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCSFRQGISMHCC 154
+ +H R+ L+ IL + +A + +H
Sbjct: 90 NPLSHHRPLAALSHFRSMLSSSTILPSPHSFAAAFTAAARAHSASAGAV-------VHAL 142
Query: 155 VYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNE 214
KL ++ + ++ ++++MY K G + +A+ +FDE+ + VSW ++ GY E
Sbjct: 143 ACKLPSASSNVFVSTALLNMYCKLGLIPDAQLVFDEMPHRNEVSWAAMVAGYAARKCSQE 202
Query: 215 AFGLCNQM-------RRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDP 267
AF L QM + V ++ +++ LG L + + +H L++K G
Sbjct: 203 AFELFRQMLGECPLHKNEFVATAVLSAISVPLG------LPMGVQVHGLVVKDGMVGFVS 256
Query: 268 LDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTS 327
++N LV+MY K G ++ A VF++ E++ W++MI GY+Q G AV +F ++
Sbjct: 257 VENSLVTMYAKAGCMDAAFHVFESSKERNSITWSAMITGYSQNGNAESAVRMFSQMHAAG 316
Query: 328 VRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAK 387
P E TL L+AC+++G+L +GK+ +V G E V+++L+ M++KCG I AK
Sbjct: 317 FPPTEFTLVGVLNACSDVGTLMEGKQAHGLMVKLGFEVQVYVKSALVDMYAKCGCIGDAK 376
Query: 388 EVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHS 447
E F + + D+ +W+AM+ G+ +G +QAL L+ +M EG+ P+ + TS+L AC+
Sbjct: 377 ECFNQFSELDIVLWTAMVTGHVQNGEFEQALMLYARMDK-EGVFPNTLTITSLLRACAGL 435
Query: 448 GMVDDGLSFFKS-MQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMP 497
++ G ++ FG+ S+ L + + G + + MP
Sbjct: 436 AALEPGKQLHTQILKFGFGLGASVGS--ALSTMYSKCGNLEDGMVVFRRMP 484
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 72/313 (23%), Positives = 155/313 (49%), Gaps = 11/313 (3%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI + NG+ E + +S M G FT VL AC+++ ++ +GK+ H ++K+G
Sbjct: 292 MITGYSQNGNAESAVRMFSQMHAAGFPPTEFTLVGVLNACSDVGTLMEGKQAHGLMVKLG 351
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F+ +V++ L+DMY+KC +++ ++ +V W ++++ H + ++A+++
Sbjct: 352 FEVQVYVKSALVDMYAKCGCIGDAKECFNQF--SELDIVLWTAMVTGHVQNGEFEQALML 409
Query: 121 LKEMWVLGLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
M G+ + T S++ C + G +H + K G + +++ +MY+
Sbjct: 410 YARMDKEGVFPNTLTITSLLRACAGLAALEPGKQLHTQILKFG-FGLGASVGSALSTMYS 468
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K G + + +F + +++W +II G+ G N+A L +M+ PD V F+N
Sbjct: 469 KCGNLEDGMVVFRRMPHRDVIAWNSIISGFSQNGRGNDAINLFEEMKLEGTAPDPVTFIN 528
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNL--LVSMYTKCGDLELARRVFDAV-L 293
++ C+ +G + + ++K Y LD+ +V + ++ G L A+ +++ +
Sbjct: 529 VLCACSHMGLVDRGWTYFRSMIKD-YGLTPRLDHYACMVDILSRAGMLSEAKDFIESITI 587
Query: 294 EKSVFLWTSMIGG 306
+ LW ++G
Sbjct: 588 DHGTCLWRIVLGA 600
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 85/329 (25%), Positives = 146/329 (44%), Gaps = 32/329 (9%)
Query: 252 SMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLEL--ARRVFDAV--LEKSVFLWTSMIGGY 307
++H+ LKSG ++ P+ N L++ Y+ L L A VF + + V W S++
Sbjct: 33 ALHAWALKSGSSSHAPVSNSLITFYSSFPRLFLPAAFAVFADIPAAARDVASWNSLLNPL 92
Query: 308 AQLGYPSEAVNLFKRLLKTS-VRPNEATLATTLSACAELGSLSKGKEIEEYIV-LNGLES 365
+ P A++ F+ +L +S + P+ + A +A A S S G + L S
Sbjct: 93 SH-HRPLAALSHFRSMLSSSTILPSPHSFAAAFTAAARAHSASAGAVVHALACKLPSASS 151
Query: 366 NRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQ 425
N V T+L++M+ K G I A+ VF+ +P ++ W+AM+ GYA +A LF +M
Sbjct: 152 NVFVSTALLNMYCKLGLIPDAQLVFDEMPHRNEVSWAAMVAGYAARKCSQEAFELFRQML 211
Query: 426 HVEGLKPDAVVYTSILSACS-----------HSGMVDDGLSFFKSMQSNFGIEPSIEHYL 474
L + V T++LSA S H +V DG+ F S++++
Sbjct: 212 GECPLHKNEFVATAVLSAISVPLGLPMGVQVHGLVVKDGMVGFVSVENS----------- 260
Query: 475 CLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLN-P 533
LV + +AG D A + E E + W+ +++ ++ N E + P
Sbjct: 261 -LVTMYAKAGCMDAAFH-VFESSKERNSITWSAMITGYSQNGNAESAVRMFSQMHAAGFP 318
Query: 534 GSTGNYILMANLFTSAGMWKEAATARGLM 562
+ + + N + G E A GLM
Sbjct: 319 PTEFTLVGVLNACSDVGTLMEGKQAHGLM 347
>gi|147856499|emb|CAN78640.1| hypothetical protein VITISV_031739 [Vitis vinifera]
Length = 954
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 193/649 (29%), Positives = 327/649 (50%), Gaps = 81/649 (12%)
Query: 50 KRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVR-LRSVVSWNSIISAH 108
+++HS ++ G + AF+ ++ +Y+ +++V + P+ +++ WNSI+ A+
Sbjct: 51 QQIHSQIIVTGSHRSAFLAARVVSVYAGFGLVSDAQRVFEVSPIECFSNLLLWNSILRAN 110
Query: 109 SRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCSF----RQGISMHCCVYKLGLLNNE 164
+EA+ + M LG+ TF V+ C+ + S+H V ++G N
Sbjct: 111 VAHGYCEEALEIYCRMRKLGVSADGFTFPLVIRACALMGSRKLCRSVHGHVVEMGFQWN- 169
Query: 165 IPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRR 224
+ + N +M MY K G++++AR +F+ + S VSW T++ GY + + A + M
Sbjct: 170 LHVGNELMGMYGKIGRMDDARKVFERMAVRSCVSWNTMVSGYALNYDCHGASEMFRMMGS 229
Query: 225 MSVTPDLVVFLNLILGCAQVGN------LFLALSM------------------------- 253
+ P+LV + +L+ A+ G LF + M
Sbjct: 230 AGLEPNLVTWTSLLSSHARCGQHVETMELFGRMRMRGIGATAEALAVVLSVSVDLAAFDE 289
Query: 254 ----HSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQ 309
H ++K G+ N + N L+ +Y K G++ AR +F + K++ W ++I YA
Sbjct: 290 GKVIHGYVVKGGFENYLFVKNSLICLYGKHGNVNAARILFLEIKTKNIVSWNALISSYAD 349
Query: 310 LG-----------------YP----------------------SEAVNLFKRLLKTSVRP 330
LG YP EA+ LF+R+ V+
Sbjct: 350 LGWCDEAFAIFLQLEKTDEYPMVRPNVVSWSAVIGGFASKGQGEEALELFRRMQLAKVKA 409
Query: 331 NEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVF 390
N T+A+ LS CAEL +L G+EI ++V + ++ N V LI+M++K G + VF
Sbjct: 410 NSVTIASVLSVCAELAALHLGREIHGHVVRSLMDGNILVGNGLINMYTKSGSFKEGNLVF 469
Query: 391 ERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMV 450
E++ +KDL W+ M+ GY IHG+G+ A+ F +M +G +PD V + ++LSACSH+G+V
Sbjct: 470 EKIENKDLISWNTMVAGYGIHGLGENAIRTFDQMIK-DGFEPDGVTFVAVLSACSHAGLV 528
Query: 451 DDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLS 510
+G F M F +EP +EHY C+VDLLGRAG A K + MPVE A VW LL+
Sbjct: 529 AEGRELFDKMIKEFRVEPQMEHYACMVDLLGRAGLLQEASKVVKSMPVEPNACVWGALLN 588
Query: 511 ACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKE 570
+C H N E+ E A + LN G+Y+L++N++ ++G W+++A R + L K
Sbjct: 589 SCRMHKNTEVAEETASQIFNLNSEIAGSYMLLSNIYAASGRWEDSAKVRISAKTKGLKKT 648
Query: 571 PGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKELHIKLLEAGYIAEAD 619
PG S +++ V +F AG+ H ++ + LK+L +++ GYI + D
Sbjct: 649 PGQSWIQVKKKVYMFSAGNTQHAELEEVYRILKDLGLQMEVEGYIPDID 697
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 128/489 (26%), Positives = 226/489 (46%), Gaps = 79/489 (16%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
++R + +G EE L Y M + GV + FTFPLV++ACA + S + VH HV+++G
Sbjct: 106 ILRANVAHGYCEEALEIYCRMRKLGVSADGFTFPLVIRACALMGSRKLCRSVHGHVVEMG 165
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVR------------------------LR 96
FQ + V L+ MY K +RKV + M VR R
Sbjct: 166 FQWNLHVGNELMGMYGKIGRMDDARKVFERMAVRSCVSWNTMVSGYALNYDCHGASEMFR 225
Query: 97 ---------SVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSG----C 143
++V+W S++S+H+R + E + + M + G+ +A V+S
Sbjct: 226 MMGSAGLEPNLVTWTSLLSSHARCGQHVETMELFGRMRMRGIGATAEALAVVLSVSVDLA 285
Query: 144 SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTII 203
+F +G +H V K G N + + NS++ +Y K G VN AR +F EI +IVSW +I
Sbjct: 286 AFDEGKVIHGYVVK-GGFENYLFVKNSLICLYGKHGNVNAARILFLEIKTKNIVSWNALI 344
Query: 204 GGYVNVGNVNEAFGLCNQMRRMS----VTPDLVVFLNLILG------------------- 240
Y ++G +EAF + Q+ + V P++V + +I G
Sbjct: 345 SSYADLGWCDEAFAIFLQLEKTDEYPMVRPNVVSWSAVIGGFASKGQGEEALELFRRMQL 404
Query: 241 ----------------CAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLEL 284
CA++ L L +H +++S + + N L++MYTK G +
Sbjct: 405 AKVKANSVTIASVLSVCAELAALHLGREIHGHVVRSLMDGNILVGNGLINMYTKSGSFKE 464
Query: 285 ARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAE 344
VF+ + K + W +M+ GY G A+ F +++K P+ T LSAC+
Sbjct: 465 GNLVFEKIENKDLISWNTMVAGYGIHGLGENAIRTFDQMIKDGFEPDGVTFVAVLSACSH 524
Query: 345 LGSLSKGKEIEEYIVLN-GLESNRQVQTSLIHMFSKCGRINKAKEVFERVP-DKDLAVWS 402
G +++G+E+ + ++ +E + ++ + + G + +A +V + +P + + VW
Sbjct: 525 AGLVAEGRELFDKMIKEFRVEPQMEHYACMVDLLGRAGLLQEASKVVKSMPVEPNACVWG 584
Query: 403 AMINGYAIH 411
A++N +H
Sbjct: 585 ALLNSCRMH 593
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 68/239 (28%), Positives = 124/239 (51%), Gaps = 14/239 (5%)
Query: 230 DLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVF 289
D++ F N +L Q L+ +HS ++ +G + L +VS+Y G + A+RVF
Sbjct: 32 DVLDFFNDLL--QQCSKSHLSQQIHSQIIVTGSHRSAFLAARVVSVYAGFGLVSDAQRVF 89
Query: 290 D-AVLE--KSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELG 346
+ + +E ++ LW S++ GY EA+ ++ R+ K V + T + ACA +G
Sbjct: 90 EVSPIECFSNLLLWNSILRANVAHGYCEEALEIYCRMRKLGVSADGFTFPLVIRACALMG 149
Query: 347 SLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMIN 406
S + + ++V G + N V L+ M+ K GR++ A++VFER+ + W+ M++
Sbjct: 150 SRKLCRSVHGHVVEMGFQWNLHVGNELMGMYGKIGRMDDARKVFERMAVRSCVSWNTMVS 209
Query: 407 GYAI----HGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQ 461
GYA+ HG + ++M GL+P+ V +TS+LS+ + G + + F M+
Sbjct: 210 GYALNYDCHGASE-----MFRMMGSAGLEPNLVTWTSLLSSHARCGQHVETMELFGRMR 263
>gi|212274935|ref|NP_001130299.1| uncharacterized protein LOC100191393 [Zea mays]
gi|194688780|gb|ACF78474.1| unknown [Zea mays]
gi|414586171|tpg|DAA36742.1| TPA: hypothetical protein ZEAMMB73_518704 [Zea mays]
Length = 695
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 188/597 (31%), Positives = 321/597 (53%), Gaps = 20/597 (3%)
Query: 36 VLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRL 95
+L+A A +S+ G ++H + K+GF D + LIDMY KC + + +V M R
Sbjct: 10 LLRASARSSSLRGGVQLHGAITKMGFGSDTMLGNNLIDMYVKCGELDLACEVFGGM--RD 67
Query: 96 RSVVSWNSIISAHSRACLNDEAILVLKEMWVLG------LELSASTFVSVVSGCSFRQGI 149
R+VVSW +++ R + +L EM LSAS V G G+
Sbjct: 68 RNVVSWTALMVGFLRHGDATGCLRLLGEMRTASEAAPNEYTLSASLKACCVVG-DTAAGV 126
Query: 150 SMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIG-ETSIVSWTTIIGGYVN 208
+H + G +++ +A+S++ +Y+K G++ +AR +FD G + I +W ++ GY +
Sbjct: 127 GIHGLCVRAGYQEHDV-VASSLVLVYSKGGRIGDARRVFDGAGLGSGIATWNAMVSGYAH 185
Query: 209 VGNVNEAFGLCNQMRRMSVT--PDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNED 266
G+ +A + +MRR PD F +L+ C+ +G +H+ + SG++
Sbjct: 186 AGHGRDALLVFREMRRHEGQHQPDEFTFASLLKACSGLGATREGAQVHAAMTASGFSTAS 245
Query: 267 P--LDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLL 324
L LV MY KC L +A +VF+ + K+V WT+++ G+AQ G +EA+ LF+R
Sbjct: 246 NAILAGALVDMYVKCRRLPVAMQVFERLERKNVIQWTAVVVGHAQEGQVTEALELFRRFW 305
Query: 325 KTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRIN 384
++ RP+ L++ + A+ + +G+++ Y + + ++ S++ M+ KCG +
Sbjct: 306 RSGARPDSHVLSSVVGVLADFALVEQGRQVHCYGIKDPTGTDVSAGNSIVDMYLKCGLPD 365
Query: 385 KAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSAC 444
+A+ +F + ++ W+ M+NG HG+G +A+ LF +M+ G++PD V Y ++LSAC
Sbjct: 366 EAERMFREMRAPNVVSWTTMVNGLGKHGLGREAVALFEEMR-AGGVEPDEVTYLALLSAC 424
Query: 445 SHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQV 504
SH+G+VD+ +F ++ + + P EHY C+VDLLGRAG A I MP+E V
Sbjct: 425 SHAGLVDECRRYFSCIRRDRTVRPKAEHYACMVDLLGRAGELREARDLIRTMPMEPTVGV 484
Query: 505 WAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDD 564
W LLSAC H +V +G A LL ++ + NY+ ++N+ AG W+E R M
Sbjct: 485 WQTLLSACRVHKDVAVGREAGDVLLAMDGDNPVNYVTLSNVLAEAGEWRECHKVRDAMRR 544
Query: 565 RRLTKEPGWSQVEIDGSVQVFVAG---DRSHHLSVDIRKTLKELHIKLLEA-GYIAE 617
R L K+ G S VE+ V F G + +H + DIR+ L+++ ++ E GY A+
Sbjct: 545 RGLKKQGGCSWVEVGKEVHFFYGGGGEEETHPQAGDIRRVLRDMETRMREQLGYNAD 601
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 103/414 (24%), Positives = 192/414 (46%), Gaps = 25/414 (6%)
Query: 29 NSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVL 88
N +T LKAC + G +H ++ G+Q+ V + L+ +YSK +R+V
Sbjct: 105 NEYTLSASLKACCVVGDTAAGVGIHGLCVRAGYQEHDVVASSLVLVYSKGGRIGDARRVF 164
Query: 89 DEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSAS--TFVSVVSGCS-- 144
D + + +WN+++S ++ A +A+LV +EM + TF S++ CS
Sbjct: 165 DGAGLG-SGIATWNAMVSGYAHAGHGRDALLVFREMRRHEGQHQPDEFTFASLLKACSGL 223
Query: 145 --FRQGISMHCCVYKLGL--LNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWT 200
R+G +H + G +N I LA +++ MY K ++ A +F+ + +++ WT
Sbjct: 224 GATREGAQVHAAMTASGFSTASNAI-LAGALVDMYVKCRRLPVAMQVFERLERKNVIQWT 282
Query: 201 TIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKS 260
++ G+ G V EA L + R PD V +++ A + +H +K
Sbjct: 283 AVVVGHAQEGQVTEALELFRRFWRSGARPDSHVLSSVVGVLADFALVEQGRQVHCYGIKD 342
Query: 261 GYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLF 320
+ N +V MY KCG + A R+F + +V WT+M+ G + G EAV LF
Sbjct: 343 PTGTDVSAGNSIVDMYLKCGLPDEAERMFREMRAPNVVSWTTMVNGLGKHGLGREAVALF 402
Query: 321 KRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQ------TSLI 374
+ + V P+E T LSAC+ G + E Y + + +R V+ ++
Sbjct: 403 EEMRAGGVEPDEVTYLALLSACSHAGLVD---ECRRY--FSCIRRDRTVRPKAEHYACMV 457
Query: 375 HMFSKCGRINKAKEVFERVP-DKDLAVWSAMINGYAIH---GMGDQALNLFYKM 424
+ + G + +A+++ +P + + VW +++ +H +G +A ++ M
Sbjct: 458 DLLGRAGELREARDLIRTMPMEPTVGVWQTLLSACRVHKDVAVGREAGDVLLAM 511
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/204 (22%), Positives = 93/204 (45%), Gaps = 9/204 (4%)
Query: 6 TNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDA 65
G E L + ++G +S V+ A+ + G++VH + +K D
Sbjct: 289 AQEGQVTEALELFRRFWRSGARPDSHVLSSVVGVLADFALVEQGRQVHCYGIKDPTGTDV 348
Query: 66 FVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMW 125
++DMY KC + ++ EM R +VVSW ++++ + L EA+ + +EM
Sbjct: 349 SAGNSIVDMYLKCGLPDEAERMFREM--RAPNVVSWTTMVNGLGKHGLGREAVALFEEMR 406
Query: 126 VLGLELSASTFVSVVSGCSFRQGISMHC-----CVYKLGLLNNEIPLANSVMSMYAKFGK 180
G+E T+++++S CS G+ C C+ + + + ++ + + G+
Sbjct: 407 AGGVEPDEVTYLALLSACSH-AGLVDECRRYFSCIRRDRTVRPKAEHYACMVDLLGRAGE 465
Query: 181 VNEARSIFDEIG-ETSIVSWTTII 203
+ EAR + + E ++ W T++
Sbjct: 466 LREARDLIRTMPMEPTVGVWQTLL 489
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 56/114 (49%)
Query: 331 NEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVF 390
+ +A L A A SL G ++ I G S+ + +LI M+ KCG ++ A EVF
Sbjct: 3 RQKMIAGLLRASARSSSLRGGVQLHGAITKMGFGSDTMLGNNLIDMYVKCGELDLACEVF 62
Query: 391 ERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSAC 444
+ D+++ W+A++ G+ HG L L +M+ P+ ++ L AC
Sbjct: 63 GGMRDRNVVSWTALMVGFLRHGDATGCLRLLGEMRTASEAAPNEYTLSASLKAC 116
>gi|449447569|ref|XP_004141540.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g71490-like [Cucumis sativus]
gi|449481506|ref|XP_004156203.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g71490-like [Cucumis sativus]
Length = 712
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 192/650 (29%), Positives = 332/650 (51%), Gaps = 49/650 (7%)
Query: 2 IRNSTNNGSFEETLSTYSSMLQTGVHGNSF-----TFPLVLKACANINSIWDGKRVHSHV 56
+++ ++G ++ +S + + +SF + ++L +C +S+ GK++H H+
Sbjct: 46 LKDFASHGQLSKSFEAFSLIQLRTSYNDSFDLILQSISILLVSCTKSSSLPPGKQLHGHI 105
Query: 57 LKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDE 116
+ G +D+F+ + L+ YS +F+ L E R SWN +I+++ + L +
Sbjct: 106 ISSGLVEDSFLVSKLVMFYSSL-EFLPEAHTLVETSNLFRPC-SWNILITSYVKHKLYEA 163
Query: 117 AILVLKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGLLNNEIPLA----NSVM 172
AIL K+M G+ TF S++ C Q + V+K + + P + N+++
Sbjct: 164 AILAYKQMVSKGVRPDNFTFPSILKACGETQNLKFGLEVHK-SINSWSTPWSLFVHNALI 222
Query: 173 SMYAKFGKVNEARSIFDEIGETSIVSWTTII----------------------------- 203
SMY + G+V+ AR++FD + E VSW ++I
Sbjct: 223 SMYGRCGEVDTARNLFDNMLERDAVSWNSMISCYSSRGMWREAFELFESMQSKCLEINVV 282
Query: 204 ------GGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLL 257
GG + VGN +A L +QMR + D V + + C+ +G + L +H
Sbjct: 283 TWNIIAGGCLRVGNFTQALKLLSQMRNFGIHLDDVAMIIGLGACSHIGAIRLGKEIHGFT 342
Query: 258 LKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAV 317
++ ++ + N LV+MY +C D+ A +F +KS W SM+ G LG EA+
Sbjct: 343 IRHYHHMLSTVQNALVTMYARCKDIRHAYMLFRLNDDKSRITWNSMLSGLTHLGRVEEAL 402
Query: 318 NLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLN-GLESNRQVQTSLIHM 376
LF+ LL V P+ T A+ L CA + L G+E YI + + + +L+ M
Sbjct: 403 CLFRELLLFGVEPDYVTFASILPLCARVADLQHGREFHCYITKHRDFRDHLLLWNALVDM 462
Query: 377 FSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVV 436
+++ G++++AK +F + KD ++++I GY + G G +A+ LF +M+ + +KPD +
Sbjct: 463 YARAGKVSEAKRIFYSLSKKDEVTYTSLIAGYGMQGEGGKAVRLFEEMKRFQ-IKPDHIT 521
Query: 437 YTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEM 496
++LSACSHSG+V+ F MQS G+ P +EHY C+ DL GR G + A + I M
Sbjct: 522 MIAVLSACSHSGLVNQAELLFAEMQSVHGLSPRLEHYACMADLFGRVGLLNKAKEIITRM 581
Query: 497 PVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAA 556
P + +WA L+ AC H N+++GE+AA+ LL + P +G Y+L+AN++ +AG W + A
Sbjct: 582 PYRPTSAIWATLIGACCIHGNMDIGEWAAEKLLEMRPEHSGYYVLIANMYAAAGSWSKLA 641
Query: 557 TARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKELH 606
R LM D + K PG S V++ F GD S +++ + L L+
Sbjct: 642 EIRTLMRDSGVAKIPGCSWVDVGSEFISFSVGDTSSPQALESKLLLDSLY 691
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 122/456 (26%), Positives = 215/456 (47%), Gaps = 43/456 (9%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+I + + +E + Y M+ GV ++FTFP +LKAC ++ G VH +
Sbjct: 151 LITSYVKHKLYEAAILAYKQMVSKGVRPDNFTFPSILKACGETQNLKFGLEVHKSINSWS 210
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
FV LI MY +C + ++R + D M R VSWNS+IS +S + EA +
Sbjct: 211 TPWSLFVHNALISMYGRCGEVDTARNLFDNMLE--RDAVSWNSMISCYSSRGMWREAFEL 268
Query: 121 LKEMWVLGLELSASTFVSVVSGC----SFRQGISMHCCVYKLGL---------------- 160
+ M LE++ T+ + GC +F Q + + + G+
Sbjct: 269 FESMQSKCLEINVVTWNIIAGGCLRVGNFTQALKLLSQMRNFGIHLDDVAMIIGLGACSH 328
Query: 161 -----LNNEI-------------PLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTI 202
L EI + N++++MYA+ + A +F + S ++W ++
Sbjct: 329 IGAIRLGKEIHGFTIRHYHHMLSTVQNALVTMYARCKDIRHAYMLFRLNDDKSRITWNSM 388
Query: 203 IGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLK-SG 261
+ G ++G V EA L ++ V PD V F +++ CA+V +L H + K
Sbjct: 389 LSGLTHLGRVEEALCLFRELLLFGVEPDYVTFASILPLCARVADLQHGREFHCYITKHRD 448
Query: 262 YNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFK 321
+ + L N LV MY + G + A+R+F ++ +K +TS+I GY G +AV LF+
Sbjct: 449 FRDHLLLWNALVDMYARAGKVSEAKRIFYSLSKKDEVTYTSLIAGYGMQGEGGKAVRLFE 508
Query: 322 RLLKTSVRPNEATLATTLSACAELGSLSKGKEI-EEYIVLNGLESNRQVQTSLIHMFSKC 380
+ + ++P+ T+ LSAC+ G +++ + + E ++GL + + +F +
Sbjct: 509 EMKRFQIKPDHITMIAVLSACSHSGLVNQAELLFAEMQSVHGLSPRLEHYACMADLFGRV 568
Query: 381 GRINKAKEVFERVPDKDL-AVWSAMINGYAIHGMGD 415
G +NKAKE+ R+P + A+W+ +I IHG D
Sbjct: 569 GLLNKAKEIITRMPYRPTSAIWATLIGACCIHGNMD 604
>gi|255561624|ref|XP_002521822.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223539035|gb|EEF40632.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 793
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 192/620 (30%), Positives = 328/620 (52%), Gaps = 15/620 (2%)
Query: 9 GSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQ 68
G + + + +S + + F++ VL AC I GK +H + G Q F+
Sbjct: 89 GFYHKAIGLFSEARMACLKLDKFSYAGVLSACGQIKDFALGKVIHGLAIVCGLGQQVFLT 148
Query: 69 TGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLG 128
LIDMY KC + + ++L E L +V SWNS+I+ ++R +E + +L +M G
Sbjct: 149 NLLIDMYCKC-ERIDHARLLFESSDELDNV-SWNSLITGYARVGAYEEMLKLLVKMHHTG 206
Query: 129 LELSASTFVSVVSGCSFR------QGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVN 182
L L+A T S + C G ++H K GL + +I + +++ MYAK G +
Sbjct: 207 LRLNAFTLGSALKSCYLNLNNMVSYGKTLHGYTVKQGL-DLDIVVGTALLDMYAKTGYLG 265
Query: 183 EARSIFDEIGETSIVSWTTIIGGYVNVGNVN-----EAFGLCNQMRRMSVTPDLVVFLNL 237
+A +F ++V + +I G++ +++ EA L +QM+R + P F ++
Sbjct: 266 DAIQLFRTSPNQNVVMYNAMIAGFIQTEDIDKECAYEALKLFSQMQRQGIKPSDFTFSSI 325
Query: 238 ILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSV 297
I C + +H+ + K +++ + + L+ +Y+ G E + F++ + +
Sbjct: 326 IKICNHIEAFEYGKQIHAHICKHNIQSDEFIGSTLIELYSLLGSTEDQLKCFNSTPKLDI 385
Query: 298 FLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEY 357
WT+MI GYAQ G A+ LF LL + +P+E + T LSACA++ + G+++ Y
Sbjct: 386 VSWTTMIAGYAQNGQFESALALFYELLASGKKPDEFIITTMLSACADVAAERSGEQVHGY 445
Query: 358 IVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQA 417
V G+ + VQ S I M++K G ++ AK FE + + D+ WS MI A HG A
Sbjct: 446 AVKTGIGTLAIVQNSQISMYAKSGNLDSAKITFEEIKNPDVVSWSVMICSNAQHGHAKDA 505
Query: 418 LNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLV 477
+NLF M+ G+ P+ + + +L+ACSH G+V++GL +++SM+ ++ ++ +++H C+V
Sbjct: 506 INLFELMKSY-GIHPNQITFLGVLTACSHGGLVEEGLRYYESMKKDYDMKINVKHCTCIV 564
Query: 478 DLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTG 537
DLL RAGR A I +W LLS C + ++ G++ A+ L+ L+P +
Sbjct: 565 DLLSRAGRLLDAKNFILNSGFGDHPVMWRTLLSGCRIYKDIVTGKHVAEKLIELDPQESS 624
Query: 538 NYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVD 597
+Y+L+ N++T AG+ A R LM DR + KEPG S +E+ V FV GD SH +S
Sbjct: 625 SYVLLYNIYTDAGIDLPATKIRELMKDRGIRKEPGQSWIEVGNEVHSFVVGDISHPMSQI 684
Query: 598 IRKTLKELHIKLLEAGYIAE 617
I K L+ + K + GYI +
Sbjct: 685 IYKKLEGMLEKKRKIGYIDQ 704
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 108/407 (26%), Positives = 205/407 (50%), Gaps = 13/407 (3%)
Query: 49 GKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAH 108
GK H+H++K F F+ +++YSK + +++K+ D M RSV+S+N +IS +
Sbjct: 28 GKLAHAHMIKTAFNPCLFLLNNFLNLYSKWGEMGNAQKLFDRMSE--RSVISYNILISGY 85
Query: 109 SRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGL---LNNEI 165
+AI + E + L+L ++ V+S C + ++ ++ L + L ++
Sbjct: 86 GGMGFYHKAIGLFSEARMACLKLDKFSYAGVLSACGQIKDFALGKVIHGLAIVCGLGQQV 145
Query: 166 PLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRM 225
L N ++ MY K +++ AR +F+ E VSW ++I GY VG E L +M
Sbjct: 146 FLTNLLIDMYCKCERIDHARLLFESSDELDNVSWNSLITGYARVGAYEEMLKLLVKMHHT 205
Query: 226 SVTPDLVVFLNLILGCAQVGNLFLAL--SMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLE 283
+ + + + C N ++ ++H +K G + + + L+ MY K G L
Sbjct: 206 GLRLNAFTLGSALKSCYLNLNNMVSYGKTLHGYTVKQGLDLDIVVGTALLDMYAKTGYLG 265
Query: 284 LARRVFDAVLEKSVFLWTSMIGGYAQL-----GYPSEAVNLFKRLLKTSVRPNEATLATT 338
A ++F ++V ++ +MI G+ Q EA+ LF ++ + ++P++ T ++
Sbjct: 266 DAIQLFRTSPNQNVVMYNAMIAGFIQTEDIDKECAYEALKLFSQMQRQGIKPSDFTFSSI 325
Query: 339 LSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDL 398
+ C + + GK+I +I + ++S+ + ++LI ++S G + F P D+
Sbjct: 326 IKICNHIEAFEYGKQIHAHICKHNIQSDEFIGSTLIELYSLLGSTEDQLKCFNSTPKLDI 385
Query: 399 AVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACS 445
W+ MI GYA +G + AL LFY++ G KPD + T++LSAC+
Sbjct: 386 VSWTTMIAGYAQNGQFESALALFYELL-ASGKKPDEFIITTMLSACA 431
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 87/279 (31%), Positives = 155/279 (55%), Gaps = 8/279 (2%)
Query: 175 YAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVF 234
Y+K+G++ A+ +FD + E S++S+ +I GY +G ++A GL ++ R + D +
Sbjct: 54 YSKWGEMGNAQKLFDRMSERSVISYNILISGYGGMGFYHKAIGLFSEARMACLKLDKFSY 113
Query: 235 LNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLE 294
++ C Q+ + L +H L + G + L NLL+ MY KC ++ AR +F++ E
Sbjct: 114 AGVLSACGQIKDFALGKVIHGLAIVCGLGQQVFLTNLLIDMYCKCERIDHARLLFESSDE 173
Query: 295 KSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACA-ELGSL-SKGK 352
W S+I GYA++G E + L ++ T +R N TL + L +C L ++ S GK
Sbjct: 174 LDNVSWNSLITGYARVGAYEEMLKLLVKMHHTGLRLNAFTLGSALKSCYLNLNNMVSYGK 233
Query: 353 EIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHG 412
+ Y V GL+ + V T+L+ M++K G + A ++F P++++ +++AMI G+
Sbjct: 234 TLHGYTVKQGLDLDIVVGTALLDMYAKTGYLGDAIQLFRTSPNQNVVMYNAMIAGFIQTE 293
Query: 413 MGD-----QALNLFYKMQHVEGLKPDAVVYTSILSACSH 446
D +AL LF +MQ +G+KP ++SI+ C+H
Sbjct: 294 DIDKECAYEALKLFSQMQR-QGIKPSDFTFSSIIKICNH 331
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/276 (27%), Positives = 141/276 (51%), Gaps = 7/276 (2%)
Query: 226 SVTP-DLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLEL 284
SV P D V + L+ ++ G+ H+ ++K+ +N L N +++Y+K G++
Sbjct: 3 SVFPLDSVAYTKLVQFSSKSGSSIHGKLAHAHMIKTAFNPCLFLLNNFLNLYSKWGEMGN 62
Query: 285 ARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAE 344
A+++FD + E+SV + +I GY +G+ +A+ LF ++ ++ + A LSAC +
Sbjct: 63 AQKLFDRMSERSVISYNILISGYGGMGFYHKAIGLFSEARMACLKLDKFSYAGVLSACGQ 122
Query: 345 LGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAM 404
+ + GK I ++ GL + LI M+ KC RI+ A+ +FE + D W+++
Sbjct: 123 IKDFALGKVIHGLAIVCGLGQQVFLTNLLIDMYCKCERIDHARLLFESSDELDNVSWNSL 182
Query: 405 INGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQS-- 462
I GYA G ++ L L KM H GL+ +A S L +C + +++ +S+ K++
Sbjct: 183 ITGYARVGAYEEMLKLLVKMHHT-GLRLNAFTLGSALKSCYLN--LNNMVSYGKTLHGYT 239
Query: 463 -NFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMP 497
G++ I L+D+ + G A++ P
Sbjct: 240 VKQGLDLDIVVGTALLDMYAKTGYLGDAIQLFRTSP 275
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 103/210 (49%), Gaps = 7/210 (3%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI NG FE L+ + +L +G + F +L ACA++ + G++VH + +K G
Sbjct: 391 MIAGYAQNGQFESALALFYELLASGKKPDEFIITTMLSACADVAAERSGEQVHGYAVKTG 450
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
A VQ I MY+K + S++ +E ++ VVSW+ +I ++++ +AI +
Sbjct: 451 IGTLAIVQNSQISMYAKSGNLDSAKITFEE--IKNPDVVSWSVMICSNAQHGHAKDAINL 508
Query: 121 LKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
+ M G+ + TF+ V++ CS +G+ + + K + + ++ + +
Sbjct: 509 FELMKSYGIHPNQITFLGVLTACSHGGLVEEGLRYYESMKKDYDMKINVKHCTCIVDLLS 568
Query: 177 KFGKVNEARSIFDEIG-ETSIVSWTTIIGG 205
+ G++ +A++ G V W T++ G
Sbjct: 569 RAGRLLDAKNFILNSGFGDHPVMWRTLLSG 598
>gi|328774747|gb|AEB39773.1| pentatricopeptide repeat protein 43 [Funaria hygrometrica]
Length = 1073
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 193/611 (31%), Positives = 321/611 (52%), Gaps = 12/611 (1%)
Query: 9 GSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQ 68
G EE + +M Q G + FT+ +L CA+ + GK +HS + G+Q D V
Sbjct: 381 GLMEEAFRLFRAMEQKGFQPDKFTYASLLAICADRADLDRGKELHSQIASTGWQTDLTVA 440
Query: 69 TGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLG 128
T LI MY+KC +RKV ++MP R +V+SWN+ IS R L EA K+M
Sbjct: 441 TALISMYAKCGSPEEARKVFNQMPER--NVISWNAFISCCCRHDLGKEAFQAFKQMRRDD 498
Query: 129 LELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEA 184
+ TF+++++ C+ +G +H + + G+L+N +AN+++SMY + G + +A
Sbjct: 499 VNPDHITFITLLNSCTSPEDLERGRYIHGKINQWGMLSNN-HVANALISMYGRCGNLADA 557
Query: 185 RSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQV 244
R +F I + SW +I V G AF L + R D F+N++ A +
Sbjct: 558 REVFYRIRRRDLGSWNAMIAANVQHGANGSAFDLFRKYRSEGGKGDKYTFINVLRAVANL 617
Query: 245 GNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMI 304
+L +H L+ K G+ + + L+ MY+KCG L A VF V EK V W +M+
Sbjct: 618 EDLDAGRMIHGLVEKGGFGKDIRVLTTLIKMYSKCGSLRDAENVFSTVQEKDVVCWNAML 677
Query: 305 GGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLE 364
YA +A+ LF+++ V P+ +T +T L+ACA L ++ GK+I + G+E
Sbjct: 678 AAYAHSDRGQDALKLFQQMQLEGVNPDSSTYSTALNACARLTAVEHGKKIHAQLKEAGME 737
Query: 365 SNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKM 424
++ +V SLI M+S+CG + AK+VFE++ +D+ W+A+I GY +G G+ AL +Y++
Sbjct: 738 TDTRVSNSLIEMYSRCGCLCSAKQVFEKMLSRDINSWNALIAGYCQNGQGNIALE-YYEL 796
Query: 425 QHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAG 484
+ P+ +TSILS+ + G + F +S++ + +EPS +HY +V LGRAG
Sbjct: 797 MLRASIVPNKATFTSILSSYAQLGEEEQAFDFLESIKKEWNMEPSEQHYAYMVAALGRAG 856
Query: 485 RFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNP-GSTGNYILMA 543
A + I E+ E A +W LL AC H NVEL E A ++LL S +
Sbjct: 857 LLKEAEEFIEEISAESAALMWESLLVACRIHLNVELAETAVEHLLDAKAQASPAVCEQLM 916
Query: 544 NLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLK 603
+++ +AG W++ + + M + L + +E++ F+A S + V + ++
Sbjct: 917 SIYAAAGRWEDVSVLKTTMQEAGLVALKSCT-IEVNSEFHNFIANHLSPQIGVQCK--IE 973
Query: 604 ELHIKLLEAGY 614
EL K+ + G+
Sbjct: 974 ELVRKMTDRGF 984
Score = 256 bits (653), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 143/497 (28%), Positives = 268/497 (53%), Gaps = 11/497 (2%)
Query: 23 QTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFV 82
+ GV N + L+ C S+ +GK+VH H+ F+ D ++ LI MYSKC
Sbjct: 93 KRGVQANLNFYARRLQQCVLAKSLAEGKKVHDHMRSAQFKPDIYLNNMLISMYSKCGSIE 152
Query: 83 SSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSG 142
+ V M + VVSWN++IS ++ + EA + +M GL+ + +TF+S++S
Sbjct: 153 DANNVFQAMEDK--DVVSWNAMISGYALHGRDQEAADLFYQMQREGLKPNQNTFISILSA 210
Query: 143 C----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVS 198
C + G +H + K G +++ ++ ++++MY K G + AR +F+E+ E ++VS
Sbjct: 211 CQSPIALEFGEQIHSRIAKAGY-ESDVNVSTALINMYCKCGSLELARKVFNEMRERNVVS 269
Query: 199 WTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLL 258
WT +I GYV G+ EA L ++ R + P+ V F +++ C +L L +H+ +
Sbjct: 270 WTAMISGYVQHGDSREALALFRKLIRSGIQPNKVSFASILGACTNPNDLGEGLKLHAYIK 329
Query: 259 KSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVN 318
++G E + N L+SMY++CG L AR+VFD + + W +MI GY + G EA
Sbjct: 330 QAGLEQEVLVGNALISMYSRCGSLANARQVFDNLRSLNRTTWNAMIAGYGE-GLMEEAFR 388
Query: 319 LFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFS 378
LF+ + + +P++ T A+ L+ CA+ L +GKE+ I G +++ V T+LI M++
Sbjct: 389 LFRAMEQKGFQPDKFTYASLLAICADRADLDRGKELHSQIASTGWQTDLTVATALISMYA 448
Query: 379 KCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYT 438
KCG +A++VF ++P++++ W+A I+ H +G +A F +M+ + + PD + +
Sbjct: 449 KCGSPEEARKVFNQMPERNVISWNAFISCCCRHDLGKEAFQAFKQMRR-DDVNPDHITFI 507
Query: 439 SILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPV 498
++L++C+ ++ G + + +G+ + L+ + GR G A + + +
Sbjct: 508 TLLNSCTSPEDLERG-RYIHGKINQWGMLSNNHVANALISMYGRCGNLADAREVFYRIRR 566
Query: 499 EVQAQVWAPLLSACMKH 515
W +++A ++H
Sbjct: 567 RDLGS-WNAMIAANVQH 582
Score = 254 bits (649), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 149/514 (28%), Positives = 260/514 (50%), Gaps = 11/514 (2%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI +G E L+ + ++++G+ N +F +L AC N N + +G ++H+++ + G
Sbjct: 273 MISGYVQHGDSREALALFRKLIRSGIQPNKVSFASILGACTNPNDLGEGLKLHAYIKQAG 332
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+Q+ V LI MYS+C ++R+V D + R + +WN++I+ + L +EA +
Sbjct: 333 LEQEVLVGNALISMYSRCGSLANARQVFDNL--RSLNRTTWNAMIAGYGEG-LMEEAFRL 389
Query: 121 LKEMWVLGLELSASTFVSVVSGCSFR----QGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
+ M G + T+ S+++ C+ R +G +H + G ++ +A +++SMYA
Sbjct: 390 FRAMEQKGFQPDKFTYASLLAICADRADLDRGKELHSQIASTG-WQTDLTVATALISMYA 448
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K G EAR +F+++ E +++SW I EAF QMRR V PD + F+
Sbjct: 449 KCGSPEEARKVFNQMPERNVISWNAFISCCCRHDLGKEAFQAFKQMRRDDVNPDHITFIT 508
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
L+ C +L +H + + G + + + N L+SMY +CG+L AR VF + +
Sbjct: 509 LLNSCTSPEDLERGRYIHGKINQWGMLSNNHVANALISMYGRCGNLADAREVFYRIRRRD 568
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEE 356
+ W +MI Q G A +LF++ + ++ T L A A L L G+ I
Sbjct: 569 LGSWNAMIAANVQHGANGSAFDLFRKYRSEGGKGDKYTFINVLRAVANLEDLDAGRMIHG 628
Query: 357 YIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQ 416
+ G + +V T+LI M+SKCG + A+ VF V +KD+ W+AM+ YA G
Sbjct: 629 LVEKGGFGKDIRVLTTLIKMYSKCGSLRDAENVFSTVQEKDVVCWNAMLAAYAHSDRGQD 688
Query: 417 ALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCL 476
AL LF +MQ +EG+ PD+ Y++ L+AC+ V+ G ++ G+E L
Sbjct: 689 ALKLFQQMQ-LEGVNPDSSTYSTALNACARLTAVEHGKKIHAQLKEA-GMETDTRVSNSL 746
Query: 477 VDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLS 510
+++ R G + K + E + W L++
Sbjct: 747 IEMYSRCGCL-CSAKQVFEKMLSRDINSWNALIA 779
Score = 248 bits (632), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 142/457 (31%), Positives = 241/457 (52%), Gaps = 9/457 (1%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI +G +E + M + G+ N TF +L AC + ++ G+++HS + K G
Sbjct: 172 MISGYALHGRDQEAADLFYQMQREGLKPNQNTFISILSACQSPIALEFGEQIHSRIAKAG 231
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
++ D V T LI+MY KC +RKV +EM R R+VVSW ++IS + + + EA+ +
Sbjct: 232 YESDVNVSTALINMYCKCGSLELARKVFNEM--RERNVVSWTAMISGYVQHGDSREALAL 289
Query: 121 LKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
+++ G++ + +F S++ C+ +G+ +H + + G L E+ + N+++SMY+
Sbjct: 290 FRKLIRSGIQPNKVSFASILGACTNPNDLGEGLKLHAYIKQAG-LEQEVLVGNALISMYS 348
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
+ G + AR +FD + + +W +I GY G + EAF L M + PD + +
Sbjct: 349 RCGSLANARQVFDNLRSLNRTTWNAMIAGY-GEGLMEEAFRLFRAMEQKGFQPDKFTYAS 407
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
L+ CA +L +HS + +G+ + + L+SMY KCG E AR+VF+ + E++
Sbjct: 408 LLAICADRADLDRGKELHSQIASTGWQTDLTVATALISMYAKCGSPEEARKVFNQMPERN 467
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEE 356
V W + I + EA FK++ + V P+ T T L++C L +G+ I
Sbjct: 468 VISWNAFISCCCRHDLGKEAFQAFKQMRRDDVNPDHITFITLLNSCTSPEDLERGRYIHG 527
Query: 357 YIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQ 416
I G+ SN V +LI M+ +CG + A+EVF R+ +DL W+AMI HG
Sbjct: 528 KINQWGMLSNNHVANALISMYGRCGNLADAREVFYRIRRRDLGSWNAMIAANVQHGANGS 587
Query: 417 ALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDG 453
A +LF K + EG K D + ++L A ++ +D G
Sbjct: 588 AFDLFRKYRS-EGGKGDKYTFINVLRAVANLEDLDAG 623
Score = 222 bits (566), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 119/361 (32%), Positives = 199/361 (55%), Gaps = 7/361 (1%)
Query: 164 EIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMR 223
+I L N ++SMY+K G + +A ++F + + +VSW +I GY G EA L QM+
Sbjct: 134 DIYLNNMLISMYSKCGSIEDANNVFQAMEDKDVVSWNAMISGYALHGRDQEAADLFYQMQ 193
Query: 224 RMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLE 283
R + P+ F++++ C L +HS + K+GY ++ + L++MY KCG LE
Sbjct: 194 REGLKPNQNTFISILSACQSPIALEFGEQIHSRIAKAGYESDVNVSTALINMYCKCGSLE 253
Query: 284 LARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACA 343
LAR+VF+ + E++V WT+MI GY Q G EA+ LF++L+++ ++PN+ + A+ L AC
Sbjct: 254 LARKVFNEMRERNVVSWTAMISGYVQHGDSREALALFRKLIRSGIQPNKVSFASILGACT 313
Query: 344 ELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSA 403
L +G ++ YI GLE V +LI M+S+CG + A++VF+ + + W+A
Sbjct: 314 NPNDLGEGLKLHAYIKQAGLEQEVLVGNALISMYSRCGSLANARQVFDNLRSLNRTTWNA 373
Query: 404 MINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSN 463
MI GY G+ ++A LF M+ +G +PD Y S+L+ C+ +D G + S
Sbjct: 374 MIAGYG-EGLMEEAFRLFRAMEQ-KGFQPDKFTYASLLAICADRADLDRGKELHSQIAST 431
Query: 464 FGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEY 523
G + + L+ + + G + A K ++MP E W +S C +H +LG+
Sbjct: 432 -GWQTDLTVATALISMYAKCGSPEEARKVFNQMP-ERNVISWNAFISCCCRH---DLGKE 486
Query: 524 A 524
A
Sbjct: 487 A 487
>gi|125551786|gb|EAY97495.1| hypothetical protein OsI_19422 [Oryza sativa Indica Group]
Length = 620
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 171/462 (37%), Positives = 269/462 (58%), Gaps = 1/462 (0%)
Query: 161 LNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCN 220
LN+ +S++++Y+ AR +F+ I +VSW ++ Y VG E +
Sbjct: 159 LNSHDHTVHSLITIYSYLDDPGAARKVFNGIPSRDVVSWNAMMKAYGRVGMNGEVGRMLR 218
Query: 221 QM-RRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKC 279
M + +V P+ V ++ C G+L L + +G + + + LV MY KC
Sbjct: 219 DMVKDGAVVPNAVTLAVVLAACRDEGDLVLGRWVEEWSKSAGMETDSLVGSALVGMYEKC 278
Query: 280 GDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTL 339
G++ ARRVFD++++K V W +MI GYAQ G +EA++LF + K V P++ TLA L
Sbjct: 279 GEIAEARRVFDSIIDKDVVAWNAMITGYAQNGMSNEAISLFHNMKKAGVCPDKITLAGVL 338
Query: 340 SACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLA 399
SAC+ +G+L G E++ Y GL +N V T+L+ M++KCG ++KA EVF ++ K++A
Sbjct: 339 SACSAVGALELGSELDGYASCRGLYNNVYVGTALVDMYAKCGDLDKAIEVFRKMRCKNVA 398
Query: 400 VWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKS 459
W+A+I G A +G GD+A+ F M++ +GLKPD + + +LSAC H+G+V DG +F S
Sbjct: 399 SWNALICGLAFNGQGDEAIQHFELMRNEDGLKPDDITFIGVLSACVHAGLVKDGKRWFNS 458
Query: 460 MQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVE 519
+ S F I P IEHY C+VDLL R+G + I ++P +V A + LL+AC K NVE
Sbjct: 459 LTSEFQIIPKIEHYSCMVDLLARSGHLEEVWDFIEKIPDKVDAVMLGALLAACRKCKNVE 518
Query: 520 LGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEID 579
+GE ++ L P ++ NY++ + ++ S+G ++A RG M +R + K PG S VEI
Sbjct: 519 IGERVINRIIQLEPTNSWNYVVSSKIYASSGRLDDSAKMRGPMRERGVNKTPGCSWVEIS 578
Query: 580 GSVQVFVAGDRSHHLSVDIRKTLKELHIKLLEAGYIAEADIV 621
G V F AGD H + D+ + L L ++ GY+ D+V
Sbjct: 579 GKVLEFYAGDEPQHGADDMYQVLDLLVDEMRLEGYVPNLDVV 620
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 82/244 (33%), Positives = 140/244 (57%), Gaps = 3/244 (1%)
Query: 254 HSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYP 313
H+LL K N+ D + L+++Y+ D AR+VF+ + + V W +M+ Y ++G
Sbjct: 151 HALLEKIDLNSHDHTVHSLITIYSYLDDPGAARKVFNGIPSRDVVSWNAMMKAYGRVGMN 210
Query: 314 SEAVNLFKRLLKT-SVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTS 372
E + + ++K +V PN TLA L+AC + G L G+ +EE+ G+E++ V ++
Sbjct: 211 GEVGRMLRDMVKDGAVVPNAVTLAVVLAACRDEGDLVLGRWVEEWSKSAGMETDSLVGSA 270
Query: 373 LIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKP 432
L+ M+ KCG I +A+ VF+ + DKD+ W+AMI GYA +GM ++A++LF+ M+ G+ P
Sbjct: 271 LVGMYEKCGEIAEARRVFDSIIDKDVVAWNAMITGYAQNGMSNEAISLFHNMKKA-GVCP 329
Query: 433 DAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKT 492
D + +LSACS G ++ G S S G+ ++ LVD+ + G D A++
Sbjct: 330 DKITLAGVLSACSAVGALELG-SELDGYASCRGLYNNVYVGTALVDMYAKCGDLDKAIEV 388
Query: 493 IHEM 496
+M
Sbjct: 389 FRKM 392
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 104/359 (28%), Positives = 173/359 (48%), Gaps = 18/359 (5%)
Query: 53 HSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRAC 112
H+ + K+ LI +YS D ++RKV + +P R VVSWN+++ A+ R
Sbjct: 151 HALLEKIDLNSHDHTVHSLITIYSYLDDPGAARKVFNGIPSR--DVVSWNAMMKAYGRVG 208
Query: 113 LNDEAILVLKEMWVLGLEL-SASTFVSVVSGCSFRQGISMHCCV---YKLGLLNNEIPLA 168
+N E +L++M G + +A T V++ C + + V K + + +
Sbjct: 209 MNGEVGRMLRDMVKDGAVVPNAVTLAVVLAACRDEGDLVLGRWVEEWSKSAGMETDSLVG 268
Query: 169 NSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVT 228
++++ MY K G++ EAR +FD I + +V+W +I GY G NEA L + M++ V
Sbjct: 269 SALVGMYEKCGEIAEARRVFDSIIDKDVVAWNAMITGYAQNGMSNEAISLFHNMKKAGVC 328
Query: 229 PDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRV 288
PD + ++ C+ VG L L + G N + LV MY KCGDL+ A V
Sbjct: 329 PDKITLAGVLSACSAVGALELGSELDGYASCRGLYNNVYVGTALVDMYAKCGDLDKAIEV 388
Query: 289 FDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLL-KTSVRPNEATLATTLSACAELGS 347
F + K+V W ++I G A G EA+ F+ + + ++P++ T LSAC G
Sbjct: 389 FRKMRCKNVASWNALICGLAFNGQGDEAIQHFELMRNEDGLKPDDITFIGVLSACVHAGL 448
Query: 348 LSKGKEIEEYIVLNGLESNRQVQTSLIH------MFSKCGRINKAKEVFERVPDKDLAV 400
+ GK N L S Q+ + H + ++ G + + + E++PDK AV
Sbjct: 449 VKDGKRW-----FNSLTSEFQIIPKIEHYSCMVDLLARSGHLEEVWDFIEKIPDKVDAV 502
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 79/313 (25%), Positives = 144/313 (46%), Gaps = 42/313 (13%)
Query: 21 MLQTG-VHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCS 79
M++ G V N+ T +VL AC + + G+ V G + D+ V + L+ MY KC
Sbjct: 220 MVKDGAVVPNAVTLAVVLAACRDEGDLVLGRWVEEWSKSAGMETDSLVGSALVGMYEKCG 279
Query: 80 DFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSV 139
+ +R+V D + + VV+WN++I+ +++ +++EAI + M G+ T V
Sbjct: 280 EIAEARRVFDS--IIDKDVVAWNAMITGYAQNGMSNEAISLFHNMKKAGVCPDKITLAGV 337
Query: 140 VSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETS 195
+S CS G + GL NN + + +++ MYAK G +++A +F ++ +
Sbjct: 338 LSACSAVGALELGSELDGYASCRGLYNN-VYVGTALVDMYAKCGDLDKAIEVFRKMRCKN 396
Query: 196 IVSWTTIIGGYVNVGNVNEAFGLCNQMRRMS-VTPDLVVFLNLILGCAQVG------NLF 248
+ SW +I G G +EA MR + PD + F+ ++ C G F
Sbjct: 397 VASWNALICGLAFNGQGDEAIQHFELMRNEDGLKPDDITFIGVLSACVHAGLVKDGKRWF 456
Query: 249 LALS--------------MHSLLLKSGYNNE---------DPLDNL----LVSMYTKCGD 281
+L+ M LL +SG+ E D +D + L++ KC +
Sbjct: 457 NSLTSEFQIIPKIEHYSCMVDLLARSGHLEEVWDFIEKIPDKVDAVMLGALLAACRKCKN 516
Query: 282 LELARRVFDAVLE 294
+E+ RV + +++
Sbjct: 517 VEIGERVINRIIQ 529
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 72/144 (50%), Gaps = 3/144 (2%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI NG E +S + +M + GV + T VL AC+ + ++ G + + G
Sbjct: 302 MITGYAQNGMSNEAISLFHNMKKAGVCPDKITLAGVLSACSAVGALELGSELDGYASCRG 361
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+ +V T L+DMY+KC D + +V +M R ++V SWN++I + DEAI
Sbjct: 362 LYNNVYVGTALVDMYAKCGDLDKAIEVFRKM--RCKNVASWNALICGLAFNGQGDEAIQH 419
Query: 121 LKEMW-VLGLELSASTFVSVVSGC 143
+ M GL+ TF+ V+S C
Sbjct: 420 FELMRNEDGLKPDDITFIGVLSAC 443
>gi|449487256|ref|XP_004157540.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Cucumis sativus]
Length = 782
Score = 326 bits (835), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 212/700 (30%), Positives = 336/700 (48%), Gaps = 111/700 (15%)
Query: 28 GNSFT----FPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVS 83
GNS T F +L+ I + G+ VH ++K G ++ L+ Y+K
Sbjct: 4 GNSPTSSEFFAHILQTSVRIKDPFAGRSVHCQIIKKGLHLGVYLMNNLMTFYAKTGSLRF 63
Query: 84 SRKVLDEMPVRLRSVVSWNSIISAHSRA---------------C---------------- 112
+ V DEMP L+S SWN++IS +++ C
Sbjct: 64 AHHVFDEMP--LKSTFSWNTLISGYAKQGNFEVSRRLLYEMPDCDPVSWTAIIVGYNQFG 121
Query: 113 LNDEAILVLKEMWVLGLELSASTFVSVVSGCSFRQ----GISMHCCVYKLGLLNNEIPLA 168
L D AI + +M + S T +V+S C+ Q G +H V KLGL + +P+A
Sbjct: 122 LFDNAIWMFAKMISERVPPSQFTVSNVLSSCAANQTLDIGRKIHSFVVKLGL-GSCVPVA 180
Query: 169 NSVMSMYAKFGKVNEARSIFD-------------------------------EIGETSIV 197
S+++MYAK G A+ +FD ++ + IV
Sbjct: 181 TSLLNMYAKCGDPVIAKVVFDRMTVKNISTWNALISLYMQSGQFELAASQFEKMPDRDIV 240
Query: 198 SWTTIIGGYVNVGNVNEAFGLCNQM-RRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSL 256
SW ++I GY G EA + ++M S+ PD +++ CA + L + +H+
Sbjct: 241 SWNSMISGYSQQGYNLEALAIFSKMLNEPSLKPDNFTLASILSACANLEKLNIGKQIHAY 300
Query: 257 LLKSGYNNEDPLDNLLVSMYTKCGDLELAR------------------------------ 286
+L++ + N L+SMY K G +E+AR
Sbjct: 301 ILRAETETSGAVGNALISMYAKSGGVEIARLIVEHNRTSNLNIIAFTSLLDGYTKLGNVK 360
Query: 287 ---RVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACA 343
+F+ + ++ V WT+MI GY Q G ++A+ LF+ ++ PN TLA LS +
Sbjct: 361 PAREIFNKLRDRDVVAWTAMIVGYVQNGLWNDALELFRLMVNEGPEPNSYTLAAMLSVSS 420
Query: 344 ELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPD--KDLAVW 401
L L GK+I + G S V +LI M++K G IN AK VF+ +P+ K++ W
Sbjct: 421 SLTILEHGKQIHASAIKAGESSTPSVTNALIAMYAKTGNINVAKRVFD-LPNGKKEIVSW 479
Query: 402 SAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQ 461
++MI A HG+G +A+NLF +M V G+KPD + Y +LSAC+H G+V+ G ++ M
Sbjct: 480 TSMIMALAQHGLGKEAINLFERMLSV-GMKPDHITYVGVLSACTHVGLVEQGRKYYNMMT 538
Query: 462 SNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELG 521
IEP++ HY C++DL GRAG A I MP+E W LL++C H N +L
Sbjct: 539 EVHEIEPTLSHYACMIDLYGRAGLLQEAYLFIESMPIEPDNIAWGSLLASCKIHKNADLA 598
Query: 522 EYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGS 581
+ AA+ LL ++PG++G Y+ +AN++++ G W+ AA R LM DR + KE G S + I
Sbjct: 599 KVAAERLLLIDPGNSGAYLALANVYSACGKWENAAQTRKLMKDRGVRKEKGISWIHIKNE 658
Query: 582 VQVFVAGDRSHHLSVDIRKTLKELHIKLLEAGYIAEADIV 621
V F D H +I K + E+ ++ + G+I + + V
Sbjct: 659 VHAFGVEDVIHPQKDEIYKLMAEIWEEIKKMGFIPDTESV 698
Score = 168 bits (425), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 125/479 (26%), Positives = 217/479 (45%), Gaps = 71/479 (14%)
Query: 9 GSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQ 68
G F+ + ++ M+ V + FT VL +CA ++ G+++HS V+K+G V
Sbjct: 121 GLFDNAIWMFAKMISERVPPSQFTVSNVLSSCAANQTLDIGRKIHSFVVKLGLGSCVPVA 180
Query: 69 TGLIDMYSKCSDFVSSRKVLDEMPVR-----------------------------LRSVV 99
T L++MY+KC D V ++ V D M V+ R +V
Sbjct: 181 TSLLNMYAKCGDPVIAKVVFDRMTVKNISTWNALISLYMQSGQFELAASQFEKMPDRDIV 240
Query: 100 SWNSIISAHSRACLNDEAILVLKEMW-VLGLELSASTFVSVVSGCS----FRQGISMHCC 154
SWNS+IS +S+ N EA+ + +M L+ T S++S C+ G +H
Sbjct: 241 SWNSMISGYSQQGYNLEALAIFSKMLNEPSLKPDNFTLASILSACANLEKLNIGKQIHAY 300
Query: 155 VYKLGLLNNEIPLANSVMSMYA---------------------------------KFGKV 181
+ + + N+++SMYA K G V
Sbjct: 301 ILR-AETETSGAVGNALISMYAKSGGVEIARLIVEHNRTSNLNIIAFTSLLDGYTKLGNV 359
Query: 182 NEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGC 241
AR IF+++ + +V+WT +I GYV G N+A L M P+ ++
Sbjct: 360 KPAREIFNKLRDRDVVAWTAMIVGYVQNGLWNDALELFRLMVNEGPEPNSYTLAAMLSVS 419
Query: 242 AQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFD-AVLEKSVFLW 300
+ + L +H+ +K+G ++ + N L++MY K G++ +A+RVFD +K + W
Sbjct: 420 SSLTILEHGKQIHASAIKAGESSTPSVTNALIAMYAKTGNINVAKRVFDLPNGKKEIVSW 479
Query: 301 TSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIV- 359
TSMI AQ G EA+NLF+R+L ++P+ T LSAC +G + +G++ +
Sbjct: 480 TSMIMALAQHGLGKEAINLFERMLSVGMKPDHITYVGVLSACTHVGLVEQGRKYYNMMTE 539
Query: 360 LNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVP-DKDLAVWSAMINGYAIHGMGDQA 417
++ +E +I ++ + G + +A E +P + D W +++ IH D A
Sbjct: 540 VHEIEPTLSHYACMIDLYGRAGLLQEAYLFIESMPIEPDNIAWGSLLASCKIHKNADLA 598
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 72/298 (24%), Positives = 130/298 (43%), Gaps = 34/298 (11%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI NG + + L + M+ G NS+T +L +++ + GK++H+ +K G
Sbjct: 380 MIVGYVQNGLWNDALELFRLMVNEGPEPNSYTLAAMLSVSSSLTILEHGKQIHASAIKAG 439
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
V LI MY+K + +++V D +P + +VSW S+I A ++ L EAI +
Sbjct: 440 ESSTPSVTNALIAMYAKTGNINVAKRVFD-LPNGKKEIVSWTSMIMALAQHGLGKEAINL 498
Query: 121 LKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGK 180
+ M +G++ T+V V+S C+ + L Y +
Sbjct: 499 FERMLSVGMKPDHITYVGVLSACT-------------------HVGLVEQGRKYYNMMTE 539
Query: 181 VNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILG 240
V+E E ++ + +I Y G + EA+ + M + PD + + +L+
Sbjct: 540 VHEI--------EPTLSHYACMIDLYGRAGLLQEAYLF---IESMPIEPDNIAWGSLLAS 588
Query: 241 CAQVGNLFLA-LSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSV 297
C N LA ++ LLL N+ L L ++Y+ CG E A + + ++ V
Sbjct: 589 CKIHKNADLAKVAAERLLLIDPGNSGAYL--ALANVYSACGKWENAAQTRKLMKDRGV 644
>gi|20146226|dbj|BAB89008.1| PPR repeat protein-like [Oryza sativa Japonica Group]
gi|125573391|gb|EAZ14906.1| hypothetical protein OsJ_04836 [Oryza sativa Japonica Group]
Length = 785
Score = 326 bits (835), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 183/604 (30%), Positives = 322/604 (53%), Gaps = 16/604 (2%)
Query: 14 TLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLID 73
+L T + + GV + F++ L AC+ + G+ VH+ + G FV L+
Sbjct: 93 SLETLARARRAGVDVDRFSYAAALAACSRAGHLRAGRAVHALAILDGLSSGVFVSNSLVS 152
Query: 74 MYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSA 133
MYSKC + +R+V D R VSWNS++S + RA +E + V M G+ L++
Sbjct: 153 MYSKCGEMGEARRVFD--VAEERDDVSWNSLVSGYVRAGAREEMVRVFAMMRRGGMGLNS 210
Query: 134 STFVSVVSGCSFRQGISM------HCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSI 187
SV+ CS R +M H CV K GL ++++ L ++++ MYAK G + EA ++
Sbjct: 211 FALGSVIKCCSGRGDGTMDIAEAVHGCVIKAGL-DSDVFLVSAMIDMYAKKGALVEAAAL 269
Query: 188 FDEIGETSIVSWTTIIGGYVNVGNV------NEAFGLCNQMRRMSVTPDLVVFLNLILGC 241
F + E ++V + T+I G+ V +EA L ++++ + P F +++ C
Sbjct: 270 FRSVQEPNVVMFNTMIAGFCRTETVIGKEVASEALTLYSEVQSRGMQPTEFTFSSVLRAC 329
Query: 242 AQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWT 301
G L +H ++K + +D + + L+ +Y G +E R F + + + WT
Sbjct: 330 NLAGYLEFGKQIHGQVIKYTFQEDDFIGSALIDLYFNSGCMEDGFRCFRSSPKHDIVTWT 389
Query: 302 SMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLN 361
+M+ G Q +A++LF L ++P+ T+++ ++ACA L G++I+ + +
Sbjct: 390 AMVSGCVQNELHEKALSLFHESLGAGLKPDLFTISSVMNACASLAVARAGEQIQCFATKS 449
Query: 362 GLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLF 421
G + + S +HM+++ G ++ A F+ + D+ WSA+I+ +A HG AL+ F
Sbjct: 450 GFDRFTVMGNSCVHMYARSGDVDAATRRFQEMESHDVVSWSAVISCHAQHGCARDALHFF 509
Query: 422 YKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLG 481
+M + + P+ + + +L+ACSH G+VD+GL ++++M ++G+ P+I+H C+VDLLG
Sbjct: 510 DEMVDAK-VVPNEITFLGVLTACSHGGLVDEGLRYYETMTKDYGLSPTIKHCTCVVDLLG 568
Query: 482 RAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYIL 541
RAGR A I +W LL++C H ++E G+ A ++ L P S+ +Y++
Sbjct: 569 RAGRLADAEAFISNSIFHADPVIWRSLLASCRIHRDLERGQLVANRIMELEPTSSASYVI 628
Query: 542 MANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKT 601
+ N++ AG A+ R LM R + KEPG S +E+ V FVAGD+SH S I
Sbjct: 629 LYNMYLDAGELSLASKTRDLMKQRGVKKEPGLSWIELKCGVHSFVAGDKSHPESSAIYTK 688
Query: 602 LKEL 605
L+E+
Sbjct: 689 LEEM 692
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 123/466 (26%), Positives = 238/466 (51%), Gaps = 26/466 (5%)
Query: 66 FVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMW 125
F++ L+ Y + + +R++LDEMP R+ VS+N +I A+SR L ++ L
Sbjct: 44 FLRNTLLAAYCRLGGPLPARRLLDEMP--RRNAVSFNLLIDAYSREGLAPLSLETLARAR 101
Query: 126 VLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKV 181
G+++ ++ + ++ CS R G ++H G L++ + ++NS++SMY+K G++
Sbjct: 102 RAGVDVDRFSYAAALAACSRAGHLRAGRAVHALAILDG-LSSGVFVSNSLVSMYSKCGEM 160
Query: 182 NEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGC 241
EAR +FD E VSW +++ GYV G E + MRR + + ++I C
Sbjct: 161 GEARRVFDVAEERDDVSWNSLVSGYVRAGAREEMVRVFAMMRRGGMGLNSFALGSVIKCC 220
Query: 242 AQVGN--LFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFL 299
+ G+ + +A ++H ++K+G +++ L + ++ MY K G L A +F +V E +V +
Sbjct: 221 SGRGDGTMDIAEAVHGCVIKAGLDSDVFLVSAMIDMYAKKGALVEAAALFRSVQEPNVVM 280
Query: 300 WTSMIGGYAQ----LG--YPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKE 353
+ +MI G+ + +G SEA+ L+ + ++P E T ++ L AC G L GK+
Sbjct: 281 FNTMIAGFCRTETVIGKEVASEALTLYSEVQSRGMQPTEFTFSSVLRACNLAGYLEFGKQ 340
Query: 354 IEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGM 413
I ++ + + + ++LI ++ G + F P D+ W+AM++G + +
Sbjct: 341 IHGQVIKYTFQEDDFIGSALIDLYFNSGCMEDGFRCFRSSPKHDIVTWTAMVSGCVQNEL 400
Query: 414 GDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHY 473
++AL+LF++ GLKPD +S+++AC+ + G + +Q F + + +
Sbjct: 401 HEKALSLFHESLGA-GLKPDLFTISSVMNACASLAVARAG----EQIQC-FATKSGFDRF 454
Query: 474 LCL----VDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKH 515
+ V + R+G D A + EM W+ ++S +H
Sbjct: 455 TVMGNSCVHMYARSGDVDAATRRFQEMESH-DVVSWSAVISCHAQH 499
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 100/417 (23%), Positives = 192/417 (46%), Gaps = 17/417 (4%)
Query: 9 GSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANI--NSIWDGKRVHSHVLKVGFQQDAF 66
G+ EE + ++ M + G+ NSF V+K C+ ++ + VH V+K G D F
Sbjct: 189 GAREEMVRVFAMMRRGGMGLNSFALGSVIKCCSGRGDGTMDIAEAVHGCVIKAGLDSDVF 248
Query: 67 VQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRA------CLNDEAILV 120
+ + +IDMY+K V + + V+ +VV +N++I+ R + EA+ +
Sbjct: 249 LVSAMIDMYAKKGALVEAAALF--RSVQEPNVVMFNTMIAGFCRTETVIGKEVASEALTL 306
Query: 121 LKEMWVLGLELSASTFVSVVSGCSFRQ----GISMHCCVYKLGLLNNEIPLANSVMSMYA 176
E+ G++ + TF SV+ C+ G +H V K ++ + ++++ +Y
Sbjct: 307 YSEVQSRGMQPTEFTFSSVLRACNLAGYLEFGKQIHGQVIKYTFQEDDF-IGSALIDLYF 365
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
G + + F + IV+WT ++ G V +A L ++ + PDL +
Sbjct: 366 NSGCMEDGFRCFRSSPKHDIVTWTAMVSGCVQNELHEKALSLFHESLGAGLKPDLFTISS 425
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
++ CA + + KSG++ + N V MY + GD++ A R F +
Sbjct: 426 VMNACASLAVARAGEQIQCFATKSGFDRFTVMGNSCVHMYARSGDVDAATRRFQEMESHD 485
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEE 356
V W+++I +AQ G +A++ F ++ V PNE T L+AC+ G + +G E
Sbjct: 486 VVSWSAVISCHAQHGCARDALHFFDEMVDAKVVPNEITFLGVLTACSHGGLVDEGLRYYE 545
Query: 357 YIVLN-GLESNRQVQTSLIHMFSKCGRINKAKE-VFERVPDKDLAVWSAMINGYAIH 411
+ + GL + T ++ + + GR+ A+ + + D +W +++ IH
Sbjct: 546 TMTKDYGLSPTIKHCTCVVDLLGRAGRLADAEAFISNSIFHADPVIWRSLLASCRIH 602
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 61/275 (22%), Positives = 118/275 (42%), Gaps = 12/275 (4%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
M+ N E+ LS + L G+ + FT V+ ACA++ G+++ K G
Sbjct: 391 MVSGCVQNELHEKALSLFHESLGAGLKPDLFTISSVMNACASLAVARAGEQIQCFATKSG 450
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F + + + MY++ D ++ + EM VVSW+++IS H++ +A+
Sbjct: 451 FDRFTVMGNSCVHMYARSGDVDAATRRFQEMES--HDVVSWSAVISCHAQHGCARDALHF 508
Query: 121 LKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
EM + + TF+ V++ CS +G+ + + K L+ I V+ +
Sbjct: 509 FDEMVDAKVVPNEITFLGVLTACSHGGLVDEGLRYYETMTKDYGLSPTIKHCTCVVDLLG 568
Query: 177 KFGKVNEARS-IFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVT--PDLVV 233
+ G++ +A + I + I V W +++ ++ + N++ + T V+
Sbjct: 569 RAGRLADAEAFISNSIFHADPVIWRSLLASCRIHRDLERGQLVANRIMELEPTSSASYVI 628
Query: 234 FLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPL 268
N+ L G L LA L+ + G E L
Sbjct: 629 LYNMYL---DAGELSLASKTRDLMKQRGVKKEPGL 660
>gi|147770957|emb|CAN76247.1| hypothetical protein VITISV_023383 [Vitis vinifera]
Length = 820
Score = 326 bits (835), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 188/591 (31%), Positives = 320/591 (54%), Gaps = 7/591 (1%)
Query: 36 VLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRL 95
+L S+ ++H+ ++ + F+ LI++Y+KC + +
Sbjct: 148 LLNTAIQTRSLKHATQIHTQIIINNYTSLPFLFNNLINLYAKCGCLNQALLLFSITHHHF 207
Query: 96 RSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCS----FRQGISM 151
+++V+W S+I+ S ++ +A+ + +M G + TF S++S + G +
Sbjct: 208 KTIVTWTSLITHLSHFNMHLQALSLFNQMRCSGPYPNQFTFSSILSASAATMMVLHGQQL 267
Query: 152 HCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGN 211
H ++K G N I + +++ MYAK ++ A +FD++ E ++VSW ++I G+ +
Sbjct: 268 HSLIHKHGFDAN-IFVGTALVDMYAKCADMHSAVRVFDQMPERNLVSWNSMIVGFFHNNL 326
Query: 212 VNEAFGLCNQ-MRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDN 270
+ A G+ +R +V P+ V +++ CA +G L +H +++K G + N
Sbjct: 327 YDRAVGVFKDVLREKTVIPNEVSVSSVLSACANMGGLNFGRQVHGVVVKYGLVPLTYVMN 386
Query: 271 LLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRP 330
L+ MY KC + ++F V ++ V W ++ G+ Q EA N F + + + P
Sbjct: 387 SLMDMYFKCRFFDEGVKLFQCVGDRDVVTWNVLVMGFVQNDKFEEACNYFWVMRREGILP 446
Query: 331 NEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVF 390
+EA+ +T L + A L +L +G I + I+ G N + SLI M++KCG + A +VF
Sbjct: 447 DEASFSTVLHSSASLAALHQGTAIHDQIIKLGYVKNMCILGSLITMYAKCGSLVDAYQVF 506
Query: 391 ERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMV 450
E + D ++ W+AMI+ Y +HG +Q + LF M EG++P V + +LSACSH+G V
Sbjct: 507 EGIEDHNVISWTAMISAYQLHGCANQVIELFEHML-SEGIEPSHVTFVCVLSACSHTGRV 565
Query: 451 DDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLS 510
++GL+ F SM+ + P EHY C+VDLLGRAG D A + I MP++ VW LL
Sbjct: 566 EEGLAHFNSMKKIHDMNPGPEHYACMVDLLGRAGWLDEAKRFIESMPMKPTPSVWGALLG 625
Query: 511 ACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKE 570
AC K+ N+++G AA+ L + P + GNY+L+AN+ T +G +EA R LM + KE
Sbjct: 626 ACRKYGNLKMGREAAERLFEMEPYNPGNYVLLANMCTRSGRLEEANEVRRLMGVNGVRKE 685
Query: 571 PGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKELHIKLLEAGYIAEADIV 621
PG S +++ VF A DRSH S +I K L++L + + GY+AE + V
Sbjct: 686 PGCSWIDVKNMTFVFTAHDRSHSSSDEIYKMLEKLEKLVKKKGYVAETEFV 736
Score = 201 bits (512), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 136/457 (29%), Positives = 229/457 (50%), Gaps = 30/457 (6%)
Query: 13 ETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLI 72
+ LS ++ M +G + N FTF +L A A + G+++HS + K GF + FV T L+
Sbjct: 228 QALSLFNQMRCSGPYPNQFTFSSILSASAATMMVLHGQQLHSLIHKHGFDANIFVGTALV 287
Query: 73 DMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAI----LVLKEMWVLG 128
DMY+KC+D S+ +V D+MP R++VSWNS+I L D A+ VL+E V+
Sbjct: 288 DMYAKCADMHSAVRVFDQMPE--RNLVSWNSMIVGFFHNNLYDRAVGVFKDVLREKTVIP 345
Query: 129 LELSASTFVSVVSGCSFRQGIS----MHCCVYKLGLLNNEIPLA---NSVMSMYAKFGKV 181
E+S S SV+S C+ G++ +H V K GL +PL NS+M MY K
Sbjct: 346 NEVSVS---SVLSACANMGGLNFGRQVHGVVVKYGL----VPLTYVMNSLMDMYFKCRFF 398
Query: 182 NEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGC 241
+E +F +G+ +V+W ++ G+V EA MRR + PD F ++
Sbjct: 399 DEGVKLFQCVGDRDVVTWNVLVMGFVQNDKFEEACNYFWVMRREGILPDEASFSTVLHSS 458
Query: 242 AQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWT 301
A + L ++H ++K GY + L++MY KCG L A +VF+ + + +V WT
Sbjct: 459 ASLAALHQGTAIHDQIIKLGYVKNMCILGSLITMYAKCGSLVDAYQVFEGIEDHNVISWT 518
Query: 302 SMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKG-KEIEEYIVL 360
+MI Y G ++ + LF+ +L + P+ T LSAC+ G + +G +
Sbjct: 519 AMISAYQLHGCANQVIELFEHMLSEGIEPSHVTFVCVLSACSHTGRVEEGLAHFNSMKKI 578
Query: 361 NGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDL-AVWSAMINGYAIHG---MGDQ 416
+ + + ++ + + G +++AK E +P K +VW A++ +G MG +
Sbjct: 579 HDMNPGPEHYACMVDLLGRAGWLDEAKRFIESMPMKPTPSVWGALLGACRKYGNLKMGRE 638
Query: 417 ALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDG 453
A ++M E P Y + + C+ SG +++
Sbjct: 639 AAERLFEM---EPYNPGN--YVLLANMCTRSGRLEEA 670
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 74/263 (28%), Positives = 143/263 (54%), Gaps = 10/263 (3%)
Query: 235 LNLILGCA-QVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVL 293
LN +L A Q +L A +H+ ++ + Y + L N L+++Y KCG L A +F
Sbjct: 145 LNHLLNTAIQTRSLKHATQIHTQIIINNYTSLPFLFNNLINLYAKCGCLNQALLLFSITH 204
Query: 294 E--KSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKG 351
K++ WTS+I + +A++LF ++ + PN+ T ++ LSA A + G
Sbjct: 205 HHFKTIVTWTSLITHLSHFNMHLQALSLFNQMRCSGPYPNQFTFSSILSASAATMMVLHG 264
Query: 352 KEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIH 411
+++ I +G ++N V T+L+ M++KC ++ A VF+++P+++L W++MI G+ +
Sbjct: 265 QQLHSLIHKHGFDANIFVGTALVDMYAKCADMHSAVRVFDQMPERNLVSWNSMIVGFFHN 324
Query: 412 GMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQS---NFGIEP 468
+ D+A+ +F + + + P+ V +S+LSAC++ G GL+F + + +G+ P
Sbjct: 325 NLYDRAVGVFKDVLREKTVIPNEVSVSSVLSACANMG----GLNFGRQVHGVVVKYGLVP 380
Query: 469 SIEHYLCLVDLLGRAGRFDLALK 491
L+D+ + FD +K
Sbjct: 381 LTYVMNSLMDMYFKCRFFDEGVK 403
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 104/210 (49%), Gaps = 7/210 (3%)
Query: 8 NGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFV 67
N FEE + + M + G+ + +F VL + A++ ++ G +H ++K+G+ ++ +
Sbjct: 426 NDKFEEACNYFWVMRREGILPDEASFSTVLHSSASLAALHQGTAIHDQIIKLGYVKNMCI 485
Query: 68 QTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVL 127
LI MY+KC V + +V + + +V+SW ++ISA+ ++ I + + M
Sbjct: 486 LGSLITMYAKCGSLVDAYQVFE--GIEDHNVISWTAMISAYQLHGCANQVIELFEHMLSE 543
Query: 128 GLELSASTFVSVVSGCSF----RQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNE 183
G+E S TFV V+S CS +G++ + K+ +N ++ + + G ++E
Sbjct: 544 GIEPSHVTFVCVLSACSHTGRVEEGLAHFNSMKKIHDMNPGPEHYACMVDLLGRAGWLDE 603
Query: 184 ARSIFDEIGETSIVS-WTTIIGGYVNVGNV 212
A+ + + S W ++G GN+
Sbjct: 604 AKRFIESMPMKPTPSVWGALLGACRKYGNL 633
>gi|15242550|ref|NP_196557.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170796|sp|Q9FIB2.1|PP373_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At5g09950
gi|9758973|dbj|BAB09416.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332004087|gb|AED91470.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 995
Score = 326 bits (835), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 194/578 (33%), Positives = 318/578 (55%), Gaps = 12/578 (2%)
Query: 49 GKRVHSHVLKVGFQQDAF-VQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISA 107
G+ VH HV+ G + GL++MY+KC +R+V M + VSWNS+I+
Sbjct: 332 GREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDK--DSVSWNSMITG 389
Query: 108 HSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNN 163
+ EA+ K M + + T +S +S C+ + G +H KLG+ N
Sbjct: 390 LDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLN 449
Query: 164 EIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNV-GNVNEAFGLCNQM 222
+ ++N++M++YA+ G +NE R IF + E VSW +IIG ++ EA
Sbjct: 450 -VSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARSERSLPEAVVCFLNA 508
Query: 223 RRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDL 282
+R + + F +++ + + L +H L LK+ +E +N L++ Y KCG++
Sbjct: 509 QRAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKNNIADEATTENALIACYGKCGEM 568
Query: 283 ELARRVFDAVLEK-SVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSA 341
+ ++F + E+ W SMI GY ++A++L +L+T R + AT LSA
Sbjct: 569 DGCEKIFSRMAERRDNVTWNSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSA 628
Query: 342 CAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVW 401
A + +L +G E+ V LES+ V ++L+ M+SKCGR++ A F +P ++ W
Sbjct: 629 FASVATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSW 688
Query: 402 SAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQ 461
++MI+GYA HG G++AL LF M+ PD V + +LSACSH+G++++G F+SM
Sbjct: 689 NSMISGYARHGQGEEALKLFETMKLDGQTPPDHVTFVGVLSACSHAGLLEEGFKHFESMS 748
Query: 462 SNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHH--NVE 519
++G+ P IEH+ C+ D+LGRAG D I +MP++ +W +L AC + + E
Sbjct: 749 DSYGLAPRIEHFSCMADVLGRAGELDKLEDFIEKMPMKPNVLIWRTVLGACCRANGRKAE 808
Query: 520 LGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEID 579
LG+ AA+ L L P + NY+L+ N++ + G W++ AR M D + KE G+S V +
Sbjct: 809 LGKKAAEMLFQLEPENAVNYVLLGNMYAAGGRWEDLVKARKKMKDADVKKEAGYSWVTMK 868
Query: 580 GSVQVFVAGDRSHHLSVDIRKTLKELHIKLLEAGYIAE 617
V +FVAGD+SH + I K LKEL+ K+ +AGY+ +
Sbjct: 869 DGVHMFVAGDKSHPDADVIYKKLKELNRKMRDAGYVPQ 906
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 138/538 (25%), Positives = 251/538 (46%), Gaps = 24/538 (4%)
Query: 9 GSFEETLSTYSSMLQTGVHGNSFTF-PLVLKACANIN-SIWDGKRVHSHVLKVGFQQDAF 66
G +SSM G +TF LV AC+ + +++ + K G D F
Sbjct: 185 GDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLF 244
Query: 67 VQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWV 126
V +GL+ ++K +RKV ++M R + V+ N ++ R +EA + +M
Sbjct: 245 VGSGLVSAFAKSGSLSYARKVFNQMETR--NAVTLNGLMVGLVRQKWGEEATKLFMDMNS 302
Query: 127 LGLELSASTFVSVVSG---------CSFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAK 177
+ +++S ++V ++S ++G +H V GL++ + + N +++MYAK
Sbjct: 303 M-IDVSPESYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAK 361
Query: 178 FGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNL 237
G + +AR +F + + VSW ++I G G EA MRR + P ++
Sbjct: 362 CGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISS 421
Query: 238 ILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSV 297
+ CA + L +H LK G + + N L+++Y + G L R++F ++ E
Sbjct: 422 LSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQ 481
Query: 298 FLWTSMIGGYA--QLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIE 355
W S+IG A + P EAV F + + N T ++ LSA + L GK+I
Sbjct: 482 VSWNSIIGALARSERSLP-EAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFGELGKQIH 540
Query: 356 EYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPD-KDLAVWSAMINGYAIHGMG 414
+ N + + +LI + KCG ++ +++F R+ + +D W++MI+GY + +
Sbjct: 541 GLALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISGYIHNELL 600
Query: 415 DQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYL 474
+AL+L + M G + D+ +Y ++LSA + ++ G+ + +E +
Sbjct: 601 AKALDLVWFMLQT-GQRLDSFMYATVLSAFASVATLERGME-VHACSVRACLESDVVVGS 658
Query: 475 CLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLN 532
LVD+ + GR D AL+ + MPV + W ++S +H GE A K T+
Sbjct: 659 ALVDMYSKCGRLDYALRFFNTMPVR-NSYSWNSMISGYARHGQ---GEEALKLFETMK 712
Score = 158 bits (400), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 145/526 (27%), Positives = 251/526 (47%), Gaps = 20/526 (3%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINS--IWDGKRVHSHVLK 58
++ + NG +E L M++ G+ N + F VL+AC I S I G+++H + K
Sbjct: 73 IVSGYSRNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFK 132
Query: 59 VGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAI 118
+ + DA V LI MY KC V + + +++ VSWNSIIS +S+A A
Sbjct: 133 LSYAVDAVVSNVLISMYWKCIGSV-GYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAF 191
Query: 119 LVLKEMWVLGLELSASTFVSVV-SGCSF-----RQGISMHCCVYKLGLLNNEIPLANSVM 172
+ M G + TF S+V + CS R + C + K GLL ++ + + ++
Sbjct: 192 RIFSSMQYDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLL-TDLFVGSGLV 250
Query: 173 SMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRM-SVTPD- 230
S +AK G ++ AR +F+++ + V+ ++ G V EA L M M V+P+
Sbjct: 251 SAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPES 310
Query: 231 LVVFLNLI--LGCAQVGNLFLALSMHSLLLKSGY-NNEDPLDNLLVSMYTKCGDLELARR 287
V+ L+ A+ L +H ++ +G + + N LV+MY KCG + ARR
Sbjct: 311 YVILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARR 370
Query: 288 VFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGS 347
VF + +K W SMI G Q G EAV +K + + + P TL ++LS+CA L
Sbjct: 371 VFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKW 430
Query: 348 LSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMING 407
G++I + G++ N V +L+ ++++ G +N+ +++F +P+ D W+++I
Sbjct: 431 AKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGA 490
Query: 408 YAIHGMG-DQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFK-SMQSNFG 465
A +A+ F Q G K + + ++S+LSA S + G ++++N
Sbjct: 491 LARSERSLPEAVVCFLNAQRA-GQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKNNIA 549
Query: 466 IEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSA 511
E + E+ L+ G+ G D K M W ++S
Sbjct: 550 DEATTEN--ALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISG 593
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 131/475 (27%), Positives = 223/475 (46%), Gaps = 24/475 (5%)
Query: 53 HSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRAC 112
HS + K +D ++ LI+ Y + D VS+RKV DEMP LR+ VSW I+S +SR
Sbjct: 24 HSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMP--LRNCVSWACIVSGYSRNG 81
Query: 113 LNDEAILVLKEMWVLGLELSASTFVSVVSGCS------FRQGISMHCCVYKLGLLNNEIP 166
+ EA++ L++M G+ + FVSV+ C G +H ++KL + +
Sbjct: 82 EHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAV- 140
Query: 167 LANSVMSMYAK-FGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRM 225
++N ++SMY K G V A F +I + VSW +II Y G+ AF + + M+
Sbjct: 141 VSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYD 200
Query: 226 SVTPDLVVFLNLILGCAQVG--NLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLE 283
P F +L+ + ++ L + + KSG + + + LVS + K G L
Sbjct: 201 GSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLS 260
Query: 284 LARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLK-TSVRPNEATLATT---- 338
AR+VF+ + ++ ++ G + + EA LF + V P + +
Sbjct: 261 YARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPESYVILLSSFPE 320
Query: 339 LSACAELGSLSKGKEIEEYIVLNGL-ESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKD 397
S E+G L KG+E+ +++ GL + + L++M++KCG I A+ VF + DKD
Sbjct: 321 YSLAEEVG-LKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKD 379
Query: 398 LAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFF 457
W++MI G +G +A+ + M+ + L P + S LS+C+ G
Sbjct: 380 SVSWNSMITGLDQNGCFIEAVERYKSMRRHDIL-PGSFTLISSLSSCASLKWAKLGQQIH 438
Query: 458 -KSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSA 511
+S++ GI+ ++ L+ L G + K MP Q W ++ A
Sbjct: 439 GESLK--LGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVS-WNSIIGA 490
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 78/307 (25%), Positives = 147/307 (47%), Gaps = 8/307 (2%)
Query: 137 VSVVSGCSFRQGIS--MHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGET 194
+S V C +G + H +YK L+ ++ L N++++ Y + G AR +FDE+
Sbjct: 7 LSFVQSCVGHRGAARFFHSRLYK-NRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLR 65
Query: 195 SIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGN--LFLALS 252
+ VSW I+ GY G EA M + + + F++++ C ++G+ +
Sbjct: 66 NCVSWACIVSGYSRNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQ 125
Query: 253 MHSLLLKSGYNNEDPLDNLLVSMYTKC-GDLELARRVFDAVLEKSVFLWTSMIGGYAQLG 311
+H L+ K Y + + N+L+SMY KC G + A F + K+ W S+I Y+Q G
Sbjct: 126 IHGLMFKLSYAVDAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAG 185
Query: 312 YPSEAVNLFKRLLKTSVRPNEATLATTLSACAELG--SLSKGKEIEEYIVLNGLESNRQV 369
A +F + RP E T + ++ L + ++I I +GL ++ V
Sbjct: 186 DQRSAFRIFSSMQYDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFV 245
Query: 370 QTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEG 429
+ L+ F+K G ++ A++VF ++ ++ + ++ G G++A LF M +
Sbjct: 246 GSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMID 305
Query: 430 LKPDAVV 436
+ P++ V
Sbjct: 306 VSPESYV 312
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 108/217 (49%), Gaps = 7/217 (3%)
Query: 233 VFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAV 292
V L+ + C VG+ A HS L K+ + + L N L++ Y + GD AR+VFD +
Sbjct: 5 VPLSFVQSC--VGHRGAARFFHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEM 62
Query: 293 LEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSK-- 350
++ W ++ GY++ G EA+ + ++K + N+ + L AC E+GS+
Sbjct: 63 PLRNCVSWACIVSGYSRNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILF 122
Query: 351 GKEIEEYIVLNGLESNRQVQTSLIHMFSKC-GRINKAKEVFERVPDKDLAVWSAMINGYA 409
G++I + + V LI M+ KC G + A F + K+ W+++I+ Y+
Sbjct: 123 GRQIHGLMFKLSYAVDAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYS 182
Query: 410 IHGMGDQALNLFYKMQHVEGLKPDAVVYTSIL-SACS 445
G A +F MQ+ +G +P + S++ +ACS
Sbjct: 183 QAGDQRSAFRIFSSMQY-DGSRPTEYTFGSLVTTACS 218
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 76/145 (52%), Gaps = 3/145 (2%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI +N + L MLQTG +SF + VL A A++ ++ G VH+ ++
Sbjct: 590 MISGYIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRAC 649
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+ D V + L+DMYSKC + + + MPV R+ SWNS+IS ++R +EA+ +
Sbjct: 650 LESDVVVGSALVDMYSKCGRLDYALRFFNTMPV--RNSYSWNSMISGYARHGQGEEALKL 707
Query: 121 LKEMWVLG-LELSASTFVSVVSGCS 144
+ M + G TFV V+S CS
Sbjct: 708 FETMKLDGQTPPDHVTFVGVLSACS 732
>gi|357457743|ref|XP_003599152.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355488200|gb|AES69403.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1125
Score = 326 bits (835), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 188/620 (30%), Positives = 317/620 (51%), Gaps = 6/620 (0%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+I S +NG FEE+L + M +T + T +L AC + + G+ +H + K G
Sbjct: 423 IITASAHNGRFEESLGHFFWMRRTHPKTDYITISALLPACGSAQHLKWGRGLHGLITKSG 482
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+ + V L+ MY++ + V MP R ++SWNS++++H AIL+
Sbjct: 483 LESNVCVCNSLLSMYAQAGSSEDAELVFHTMPAR--DLISWNSMMASHVEDGKYSHAILL 540
Query: 121 LKEMWVLGLELSASTFVSVVSGCSFRQGISM-HCCVYKLGLLNNEIPLANSVMSMYAKFG 179
L EM ++ TF + +S C + + + H V + +N I + N++++MY KFG
Sbjct: 541 LVEMLKTRKAMNYVTFTTALSACYNLEKLKIVHAFVIHFAVHHNLI-IGNTLVTMYGKFG 599
Query: 180 KVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLIL 239
++EA+ + + E +V+W +IGG+ + + N N MRR + + + +NL+
Sbjct: 600 LMDEAQKVCKIMPERDVVTWNALIGGHADDKDPNATIQAFNLMRREGLLSNYITIVNLLG 659
Query: 240 GCAQVGNLFL-ALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVF 298
C L + +H+ ++ +G+ + + + L++MY +CGDL + +FD + K+
Sbjct: 660 TCMSPDYLLKHGMPIHAHIVVAGFELDTYVQSSLITMYAQCGDLNTSSYIFDVLANKNSS 719
Query: 299 LWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYI 358
W ++ A G EA+ R+ V ++ + + L+ L L +G+++ +I
Sbjct: 720 TWNAIFSANAHYGPGEEALKFIARMRNDGVDLDQFSFSVALATIGNLTVLDEGQQLHSWI 779
Query: 359 VLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQAL 418
+ G E + V + + M+ KCG I+ + + W+ +I+ A HG QA
Sbjct: 780 IKLGFELDEYVLNATMDMYGKCGEIDDVFRILPIPKIRSKRSWNILISALARHGFFRQAT 839
Query: 419 NLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVD 478
F++M + GLKPD V + S+LSACSH G+VD+GL +F SM S FG+ +IEH +C++D
Sbjct: 840 EAFHEMLDL-GLKPDHVTFVSLLSACSHGGLVDEGLVYFSSMTSEFGVPTAIEHCVCIID 898
Query: 479 LLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGN 538
LLGR+GR A I +MPV VW LL+AC H N+ELG AA L LN
Sbjct: 899 LLGRSGRLAEAEGFIDKMPVPPNEFVWRSLLAACKVHGNLELGRKAADRLFELNSSDDSA 958
Query: 539 YILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDI 598
Y+L +N+ S W + R M+ + L K+P S +++ V F GD+ H S I
Sbjct: 959 YVLYSNVCASTQRWGDVENVRKQMESQSLKKKPACSWIKLKNKVMTFGMGDQFHPQSAQI 1018
Query: 599 RKTLKELHIKLLEAGYIAEA 618
L+EL E G++ +
Sbjct: 1019 YAKLEELRKMTREEGHMPDT 1038
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 117/449 (26%), Positives = 212/449 (47%), Gaps = 11/449 (2%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKR-VHSHVLKV 59
MI G + + + + M + GV +S+ ++ AC + +G R +H +V+K
Sbjct: 219 MISGFVRVGWYHKAMQFFCHMFENGVTPSSYVIASMVTACDRSGCMTEGARQIHGYVVKC 278
Query: 60 GFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAIL 119
G + FV T L+ Y + K+ +E + ++VSW S++ ++ E +
Sbjct: 279 GLMSNVFVGTSLLHFYGTHGSVSEANKLFEE--IEEPNIVSWTSLMVCYADNGHTKEVLN 336
Query: 120 VLKEMWVLGLELSASTFVSVVSGCSF----RQGISMHCCVYKLGLLNNEIPLANSVMSMY 175
+ + + GL + +T +V+ C G + V K GL + + +ANS++SM+
Sbjct: 337 IYRHLRHNGLICTGNTMATVIRTCGMFGDKTMGYQILGDVIKSGLDTSSVSVANSLISMF 396
Query: 176 AKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFL 235
+ V EA +F+ + E +SW +II + G E+ G MRR D +
Sbjct: 397 GNYDSVEEASRVFNNMQERDTISWNSIITASAHNGRFEESLGHFFWMRRTHPKTDYITIS 456
Query: 236 NLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEK 295
L+ C +L +H L+ KSG + + N L+SMY + G E A VF + +
Sbjct: 457 ALLPACGSAQHLKWGRGLHGLITKSGLESNVCVCNSLLSMYAQAGSSEDAELVFHTMPAR 516
Query: 296 SVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIE 355
+ W SM+ + + G S A+ L +LKT N T T LSAC L L K +
Sbjct: 517 DLISWNSMMASHVEDGKYSHAILLLVEMLKTRKAMNYVTFTTALSACYNLEKL---KIVH 573
Query: 356 EYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGD 415
+++ + N + +L+ M+ K G +++A++V + +P++D+ W+A+I G+A +
Sbjct: 574 AFVIHFAVHHNLIIGNTLVTMYGKFGLMDEAQKVCKIMPERDVVTWNALIGGHADDKDPN 633
Query: 416 QALNLFYKMQHVEGLKPDAVVYTSILSAC 444
+ F M+ EGL + + ++L C
Sbjct: 634 ATIQAFNLMRR-EGLLSNYITIVNLLGTC 661
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 145/510 (28%), Positives = 235/510 (46%), Gaps = 29/510 (5%)
Query: 49 GKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAH 108
GK +H+ +K QQ+ F L++MYSK ++ V D+M R+ SWN++IS
Sbjct: 166 GKALHALCVKDVIQQNTFYTNTLVNMYSKFGSIKYAQHVFDKM--YDRNDASWNNMISGF 223
Query: 109 SRACLNDEAILVLKEMWVLGLELSASTFVSVV-----SGCSFRQGISMHCCVYKLGLLNN 163
R +A+ M+ G+ S+ S+V SGC +H V K GL++N
Sbjct: 224 VRVGWYHKAMQFFCHMFENGVTPSSYVIASMVTACDRSGCMTEGARQIHGYVVKCGLMSN 283
Query: 164 EIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMR 223
+ + S++ Y G V+EA +F+EI E +IVSWT+++ Y + G+ E + +R
Sbjct: 284 -VFVGTSLLHFYGTHGSVSEANKLFEEIEEPNIVSWTSLMVCYADNGHTKEVLNIYRHLR 342
Query: 224 RMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNED-PLDNLLVSMYTKCGDL 282
+ +I C G+ + + ++KSG + + N L+SM+ +
Sbjct: 343 HNGLICTGNTMATVIRTCGMFGDKTMGYQILGDVIKSGLDTSSVSVANSLISMFGNYDSV 402
Query: 283 ELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSAC 342
E A RVF+ + E+ W S+I A G E++ F + +T + + T++ L AC
Sbjct: 403 EEASRVFNNMQERDTISWNSIITASAHNGRFEESLGHFFWMRRTHPKTDYITISALLPAC 462
Query: 343 AELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWS 402
L G+ + I +GLESN V SL+ M+++ G A+ VF +P +DL W+
Sbjct: 463 GSAQHLKWGRGLHGLITKSGLESNVCVCNSLLSMYAQAGSSEDAELVFHTMPARDLISWN 522
Query: 403 AMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQS 462
+M+ + G A+ L +M + V +T+ LSAC + L K + +
Sbjct: 523 SMMASHVEDGKYSHAILLLVEMLKTRKAM-NYVTFTTALSACYN-------LEKLKIVHA 574
Query: 463 NFGIEPSIEHYL----CLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLS--ACMKHH 516
F I ++ H L LV + G+ G D A K MP E W L+ A K
Sbjct: 575 -FVIHFAVHHNLIIGNTLVTMYGKFGLMDEAQKVCKIMP-ERDVVTWNALIGGHADDKDP 632
Query: 517 NVELGEYAAKNLLTLNPGSTGNYILMANLF 546
N + A NL+ G NYI + NL
Sbjct: 633 NATI---QAFNLMR-REGLLSNYITIVNLL 658
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 84/348 (24%), Positives = 161/348 (46%), Gaps = 8/348 (2%)
Query: 215 AFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVS 274
++G+ +R S P + FL GN+ AL H+L +K N LV+
Sbjct: 134 SYGIHTFIRNHS-NPQVSRFLQKGFSEISEGNVGKAL--HALCVKDVIQQNTFYTNTLVN 190
Query: 275 MYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEAT 334
MY+K G ++ A+ VFD + +++ W +MI G+ ++G+ +A+ F + + V P+
Sbjct: 191 MYSKFGSIKYAQHVFDKMYDRNDASWNNMISGFVRVGWYHKAMQFFCHMFENGVTPSSYV 250
Query: 335 LATTLSACAELGSLSKG-KEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERV 393
+A+ ++AC G +++G ++I Y+V GL SN V TSL+H + G +++A ++FE +
Sbjct: 251 IASMVTACDRSGCMTEGARQIHGYVVKCGLMSNVFVGTSLLHFYGTHGSVSEANKLFEEI 310
Query: 394 PDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDG 453
+ ++ W++++ YA +G + LN++ ++H GL +++ C G G
Sbjct: 311 EEPNIVSWTSLMVCYADNGHTKEVLNIYRHLRH-NGLICTGNTMATVIRTCGMFGDKTMG 369
Query: 454 LSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACM 513
+ + S+ L+ + G + A + + M E W +++A
Sbjct: 370 YQILGDVIKSGLDTSSVSVANSLISMFGNYDSVEEASRVFNNMQ-ERDTISWNSIITASA 428
Query: 514 KHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGL 561
HN E +YI ++ L + G + RGL
Sbjct: 429 --HNGRFEESLGHFFWMRRTHPKTDYITISALLPACGSAQHLKWGRGL 474
>gi|357508407|ref|XP_003624492.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355499507|gb|AES80710.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1125
Score = 326 bits (835), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 191/619 (30%), Positives = 324/619 (52%), Gaps = 9/619 (1%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+I N F E + M + G+ + + +L +S+ + ++VHSHV+K+G
Sbjct: 169 LIGGYAQNNQFREAFGLFIEMGRHGIDPDHVSLATLLSGFTEFDSVNEVRQVHSHVIKLG 228
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+ V L+D Y K + ++ +++P R V++N++++ +S+ N EAI +
Sbjct: 229 YDSTLVVSNSLLDSYCKTRSLGLAFQLFNDIPER--DSVTFNALLTGYSKEGFNREAINL 286
Query: 121 LKEMWVLGLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
+M +G + TF ++++ G +H V K + N + +AN+++ Y+
Sbjct: 287 FFKMQEVGYRPTEFTFAAILTAGIQLDDIEFGQQVHGFVVKCNFVWN-VFVANALLDFYS 345
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K +V EA +F E+ E +S+ ++ Y G V E+ L +++ F
Sbjct: 346 KHDRVVEASKLFYEMPEVDGISYNVLVTCYAWNGRVKESLELFKELQFTGFDRRNFPFAT 405
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
L+ A NL + +HS + + +E + N LV MY KCG+ A R+F + +S
Sbjct: 406 LLSIAAISLNLDIGRQIHSQTIVTDAISEILVGNSLVDMYAKCGEFGEANRIFSDLAIQS 465
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEE 356
WT+MI Y Q G + + LF + + + + AT A+ + ACA L SL+ GK++
Sbjct: 466 SVPWTAMISSYVQKGLHEDGLKLFVEMQRAKIGADAATYASIVRACASLASLTLGKQLHS 525
Query: 357 YIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQ 416
+I+ +G SN ++L+ M++KCG I A ++F+ +P ++ W+A+I+ YA +G GD
Sbjct: 526 HIIGSGYISNVFSGSALVDMYAKCGSIKDALQMFQEMPVRNSVSWNALISAYAQNGDGDC 585
Query: 417 ALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCL 476
L LF +M GL+PD+V SIL ACSH G+V++GL +F SM + + P EHY
Sbjct: 586 TLRLFEEMVR-SGLQPDSVSLLSILCACSHCGLVEEGLQYFDSMTRIYKLVPKKEHYAST 644
Query: 477 VDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNP-GS 535
+D+L R GRFD A K + +MP E +W+ +L++C H N EL + AA L +
Sbjct: 645 IDMLCRGGRFDEAEKLMAQMPFEPDEIMWSSVLNSCGIHKNQELAKKAANQLFNMKVLRD 704
Query: 536 TGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLS 595
Y+ M+N++ +AG W + M +R + K P +S VEI VF A D++H
Sbjct: 705 AAPYVTMSNIYAAAGEWDNVGKVKKAMRERGVKKVPAYSWVEIKHKTHVFTANDKTHPQM 764
Query: 596 VDIRKTLKELHIKLLEAGY 614
+I K L EL K+++ GY
Sbjct: 765 REIMKKLDELEEKMVKKGY 783
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 94/346 (27%), Positives = 180/346 (52%), Gaps = 9/346 (2%)
Query: 169 NSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVT 228
N+++ Y K G ++EAR++FD + + + V+WT +IGGY EAFGL +M R +
Sbjct: 136 NTMIMGYIKSGNLSEARTLFDSMFQRTAVTWTMLIGGYAQNNQFREAFGLFIEMGRHGID 195
Query: 229 PDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRV 288
PD V L+ G + ++ +HS ++K GY++ + N L+ Y K L LA ++
Sbjct: 196 PDHVSLATLLSGFTEFDSVNEVRQVHSHVIKLGYDSTLVVSNSLLDSYCKTRSLGLAFQL 255
Query: 289 FDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSL 348
F+ + E+ + +++ GY++ G+ EA+NLF ++ + RP E T A L+A +L +
Sbjct: 256 FNDIPERDSVTFNALLTGYSKEGFNREAINLFFKMQEVGYRPTEFTFAAILTAGIQLDDI 315
Query: 349 SKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGY 408
G+++ ++V N V +L+ +SK R+ +A ++F +P+ D ++ ++ Y
Sbjct: 316 EFGQQVHGFVVKCNFVWNVFVANALLDFYSKHDRVVEASKLFYEMPEVDGISYNVLVTCY 375
Query: 409 AIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEP 468
A +G ++L LF ++Q G + ++LS + S +D G + + S +
Sbjct: 376 AWNGRVKESLELFKELQFT-GFDRRNFPFATLLSIAAISLNLDIG----RQIHSQTIVTD 430
Query: 469 SIEHYLC---LVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSA 511
+I L LVD+ + G F A + ++ ++ W ++S+
Sbjct: 431 AISEILVGNSLVDMYAKCGEFGEANRIFSDLAIQSSVP-WTAMISS 475
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 125/517 (24%), Positives = 224/517 (43%), Gaps = 48/517 (9%)
Query: 36 VLKACA-NINSIWDGKRVHSHV----LKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDE 90
++K C N+ + + H HV +K GF + + L+ + + D +RK+ DE
Sbjct: 67 IIKPCTRNLVTTLTAPKPHLHVDASIIKTGFNPNTYRSNFLVKSFLQRGDLNGARKLFDE 126
Query: 91 MPVR-----------------------------LRSVVSWNSIISAHSRACLNDEAILVL 121
MP + R+ V+W +I +++ EA +
Sbjct: 127 MPHKNIFSTNTMIMGYIKSGNLSEARTLFDSMFQRTAVTWTMLIGGYAQNNQFREAFGLF 186
Query: 122 KEMWVLGLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAK 177
EM G++ + +++SG S + +H V KLG ++ + ++NS++ Y K
Sbjct: 187 IEMGRHGIDPDHVSLATLLSGFTEFDSVNEVRQVHSHVIKLG-YDSTLVVSNSLLDSYCK 245
Query: 178 FGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNL 237
+ A +F++I E V++ ++ GY G EA L +M+ + P F +
Sbjct: 246 TRSLGLAFQLFNDIPERDSVTFNALLTGYSKEGFNREAINLFFKMQEVGYRPTEFTFAAI 305
Query: 238 ILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSV 297
+ Q+ ++ +H ++K + + N L+ Y+K + A ++F + E
Sbjct: 306 LTAGIQLDDIEFGQQVHGFVVKCNFVWNVFVANALLDFYSKHDRVVEASKLFYEMPEVDG 365
Query: 298 FLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEY 357
+ ++ YA G E++ LFK L T AT LS A +L G++I
Sbjct: 366 ISYNVLVTCYAWNGRVKESLELFKELQFTGFDRRNFPFATLLSIAAISLNLDIGRQIHSQ 425
Query: 358 IVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQA 417
++ S V SL+ M++KCG +A +F + + W+AMI+ Y G+ +
Sbjct: 426 TIVTDAISEILVGNSLVDMYAKCGEFGEANRIFSDLAIQSSVPWTAMISSYVQKGLHEDG 485
Query: 418 LNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNF---GIEPSIEHYL 474
L LF +MQ + + DA Y SI+ AC+ L+ K + S+ G ++
Sbjct: 486 LKLFVEMQRAK-IGADAATYASIVRACASLA----SLTLGKQLHSHIIGSGYISNVFSGS 540
Query: 475 CLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSA 511
LVD+ + G AL+ EMPV + W L+SA
Sbjct: 541 ALVDMYAKCGSIKDALQMFQEMPVR-NSVSWNALISA 576
>gi|302773067|ref|XP_002969951.1| hypothetical protein SELMODRAFT_92231 [Selaginella moellendorffii]
gi|300162462|gb|EFJ29075.1| hypothetical protein SELMODRAFT_92231 [Selaginella moellendorffii]
Length = 789
Score = 326 bits (835), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 196/635 (30%), Positives = 342/635 (53%), Gaps = 31/635 (4%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+IR + G F +L + MLQ G ++ F ++KA I +G+ V K G
Sbjct: 84 VIRANAQAGDFPRSLLFFQRMLQDGSVPDAVVFLSLIKAPGTIQ---EGEIVQDFAKKSG 140
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F + V T LI MY +C ++ D ++ R VVSWN++I+ +SR ++++ V
Sbjct: 141 FDRSFVVGTALIGMYGRCGRLDRAKDAFDR--IQERGVVSWNALITVYSRGDEKEQSLRV 198
Query: 121 LKEMWVLGLELSASTFVSVVSGCSFRQGIS---------MHCCVYKLGLLNNEIPLANSV 171
+EM + G+ +A T + + S + GI+ +H C GL++ +ANS+
Sbjct: 199 FREMLLQGIAPNAVTIICIASAVA---GIAAKITTCGNLIHACSIDSGLIS-VTTVANSI 254
Query: 172 MSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDL 231
++++ + G ++ A IF+++ + + SW T+I + G+V EA L RM++ PD
Sbjct: 255 INLFGRGGNISRANEIFEKVDQRDVCSWNTMIAAFAKNGHVFEALDLYG---RMTIRPDG 311
Query: 232 VVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDA 291
V F+N++ C +L S+H GY+++ + LVSMY +CG L+ A VF A
Sbjct: 312 VTFVNVLEACDCPDDLERGESIHRDARAHGYDSDLIVATALVSMYRRCGRLDRAAEVFAA 371
Query: 292 VLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKG 351
+ V ++I +AQ G ++ F+++L+ +RP++ TL L ACA G+ +
Sbjct: 372 IQHPGVITLNAIIAAHAQFGRADGSLLHFRQMLQLGIRPSKFTLVAVLGACATSGAAASA 431
Query: 352 -KEIEEYIVLNGLESNRQ---VQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMING 407
+++ ++ + + V+ +L++M++KCG ++ A+ +F+ P +++ W+A++ G
Sbjct: 432 GRDLHRWMAECPGDCDPHDILVRNALVNMYAKCGDLDAARGIFDAAPQGNVSTWNAIMAG 491
Query: 408 YAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIE 467
YA HG D A+ L Y+MQ + G+ PD + +T+ LSA SH+ V+DG F ++ ++G+
Sbjct: 492 YAQHGYADMAVRLLYEMQ-LAGISPDPISFTAALSASSHARQVEDGARIFYAISRDYGLI 550
Query: 468 PSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKN 527
PS+EHY +VDLLGRAG + A + M + A W LL AC H + + AA+
Sbjct: 551 PSVEHYGAVVDLLGRAGWLEEAEGFLRSMAIAADAAAWMALLGACRIHKDQDRAMRAAEA 610
Query: 528 LLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVA 587
++ ++P +Y +++N++++AG W EA R M + KEPG S +E+ V F
Sbjct: 611 IVAIDPSHGASYTVLSNVYSAAGRWDEAEEIRRRMGENGARKEPGRSWIEVKNRVHEFAV 670
Query: 588 GDRSHHLSVDIRKTLKELHIKLLEAGYIAEADIVP 622
DRSH + +I + L EL + L +E D VP
Sbjct: 671 KDRSHPRTGEIYERLDELRVVLK-----SEEDYVP 700
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 101/406 (24%), Positives = 203/406 (50%), Gaps = 20/406 (4%)
Query: 44 NSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNS 103
S+ G+++H V++ G+ F+ L+ MY++ + +LD MP R+ VSWN+
Sbjct: 26 TSLDQGRKIHRRVIESGYGDHLFLSNHLLHMYARLESSRDAELLLDRMP--RRNAVSWNA 83
Query: 104 IISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGC-SFRQGISMHCCVYKLGLLN 162
+I A+++A ++L + M G A F+S++ + ++G + K G +
Sbjct: 84 VIRANAQAGDFPRSLLFFQRMLQDGSVPDAVVFLSLIKAPGTIQEGEIVQDFAKKSG-FD 142
Query: 163 NEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQM 222
+ +++ MY + G+++ A+ FD I E +VSW +I Y ++ + +M
Sbjct: 143 RSFVVGTALIGMYGRCGRLDRAKDAFDRIQERGVVSWNALITVYSRGDEKEQSLRVFREM 202
Query: 223 RRMSVTPDLVVFLNLILGCAQV-------GNLFLALSMHSLLLKSGYNNEDPLDNLLVSM 275
+ P+ V + + A + GNL +H+ + SG + + N ++++
Sbjct: 203 LLQGIAPNAVTIICIASAVAGIAAKITTCGNL-----IHACSIDSGLISVTTVANSIINL 257
Query: 276 YTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATL 335
+ + G++ A +F+ V ++ V W +MI +A+ G+ EA++L+ R+ ++RP+ T
Sbjct: 258 FGRGGNISRANEIFEKVDQRDVCSWNTMIAAFAKNGHVFEALDLYGRM---TIRPDGVTF 314
Query: 336 ATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPD 395
L AC L +G+ I +G +S+ V T+L+ M+ +CGR+++A EVF +
Sbjct: 315 VNVLEACDCPDDLERGESIHRDARAHGYDSDLIVATALVSMYRRCGRLDRAAEVFAAIQH 374
Query: 396 KDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSIL 441
+ +A+I +A G D +L F +M + G++P ++L
Sbjct: 375 PGVITLNAIIAAHAQFGRADGSLLHFRQMLQL-GIRPSKFTLVAVL 419
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 97/350 (27%), Positives = 174/350 (49%), Gaps = 15/350 (4%)
Query: 144 SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTII 203
S QG +H V + G + + L+N ++ MYA+ +A + D + + VSW +I
Sbjct: 27 SLDQGRKIHRRVIESGY-GDHLFLSNHLLHMYARLESSRDAELLLDRMPRRNAVSWNAVI 85
Query: 204 GGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLIL--GCAQVGNLFLALSMHSLLLKSG 261
G+ + +M + PD VVFL+LI G Q G + + KSG
Sbjct: 86 RANAQAGDFPRSLLFFQRMLQDGSVPDAVVFLSLIKAPGTIQEGEI-----VQDFAKKSG 140
Query: 262 YNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFK 321
++ + L+ MY +CG L+ A+ FD + E+ V W ++I Y++ +++ +F+
Sbjct: 141 FDRSFVVGTALIGMYGRCGRLDRAKDAFDRIQERGVVSWNALITVYSRGDEKEQSLRVFR 200
Query: 322 RLLKTSVRPNEATLATTLSACAELGS--LSKGKEIEEYIVLNGLESNRQVQTSLIHMFSK 379
+L + PN T+ SA A + + + G I + +GL S V S+I++F +
Sbjct: 201 EMLLQGIAPNAVTIICIASAVAGIAAKITTCGNLIHACSIDSGLISVTTVANSIINLFGR 260
Query: 380 CGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTS 439
G I++A E+FE+V +D+ W+ MI +A +G +AL+L+ +M ++PD V + +
Sbjct: 261 GGNISRANEIFEKVDQRDVCSWNTMIAAFAKNGHVFEALDLYGRMT----IRPDGVTFVN 316
Query: 440 ILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLA 489
+L AC ++ G S + +++ G + + LV + R GR D A
Sbjct: 317 VLEACDCPDDLERGESIHRDARAH-GYDSDLIVATALVSMYRRCGRLDRA 365
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 72/146 (49%), Gaps = 5/146 (3%)
Query: 344 ELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSA 403
E SL +G++I ++ +G + + L+HM+++ A+ + +R+P ++ W+A
Sbjct: 24 ESTSLDQGRKIHRRVIESGYGDHLFLSNHLLHMYARLESSRDAELLLDRMPRRNAVSWNA 83
Query: 404 MINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSN 463
+I A G ++L F +M +G PDAVV+ S++ A G + +G +
Sbjct: 84 VIRANAQAGDFPRSLLFFQRMLQ-DGSVPDAVVFLSLIKA---PGTIQEG-EIVQDFAKK 138
Query: 464 FGIEPSIEHYLCLVDLLGRAGRFDLA 489
G + S L+ + GR GR D A
Sbjct: 139 SGFDRSFVVGTALIGMYGRCGRLDRA 164
>gi|125529196|gb|EAY77310.1| hypothetical protein OsI_05285 [Oryza sativa Indica Group]
Length = 785
Score = 326 bits (835), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 183/604 (30%), Positives = 322/604 (53%), Gaps = 16/604 (2%)
Query: 14 TLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLID 73
+L T + + GV + F++ L AC+ + G+ VH+ + G FV L+
Sbjct: 93 SLETLARARRAGVDVDRFSYAAALAACSRAGHLRAGRAVHALAILDGLSSGVFVSNSLVS 152
Query: 74 MYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSA 133
MYSKC + +R+V D R VSWNS++S + RA +E + V M G+ L++
Sbjct: 153 MYSKCGEMGEARRVFD--VAEERDDVSWNSLVSGYVRAGAREEMVRVFAMMRRGGMGLNS 210
Query: 134 STFVSVVSGCSFRQGISM------HCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSI 187
SV+ CS R +M H CV K GL ++++ L ++++ MYAK G + EA ++
Sbjct: 211 FALGSVIKCCSGRGDGTMDIAEAVHGCVIKAGL-DSDVFLVSAMIDMYAKKGALVEAAAL 269
Query: 188 FDEIGETSIVSWTTIIGGYVNVGNV------NEAFGLCNQMRRMSVTPDLVVFLNLILGC 241
F + E ++V + T+I G+ V +EA L ++++ + P F +++ C
Sbjct: 270 FRSVQEPNVVMFNTMIAGFCRTETVIGKEVASEALTLYSEVQSRGMQPTEFTFSSVLRAC 329
Query: 242 AQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWT 301
G L +H ++K + +D + + L+ +Y G +E R F + + + WT
Sbjct: 330 NLAGYLEFGKQIHGQVIKYTFQEDDFIGSALIDLYFNSGCMEDGFRCFRSSPKHDIVTWT 389
Query: 302 SMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLN 361
+M+ G Q +A++LF L ++P+ T+++ ++ACA L G++I+ + +
Sbjct: 390 AMVSGCVQNELHEKALSLFHESLGAGLKPDLFTISSVMNACASLAVARAGEQIQCFATKS 449
Query: 362 GLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLF 421
G + + S +HM+++ G ++ A F+ + D+ WSA+I+ +A HG AL+ F
Sbjct: 450 GFDRFTVMGNSCVHMYARSGDVDAATRRFQEMESHDVVSWSAVISCHAQHGCARDALHFF 509
Query: 422 YKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLG 481
+M + + P+ + + +L+ACSH G+VD+GL ++++M ++G+ P+I+H C+VDLLG
Sbjct: 510 DEMVDAK-VVPNEITFLGVLTACSHGGLVDEGLRYYETMNKDYGLSPTIKHCTCVVDLLG 568
Query: 482 RAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYIL 541
RAGR A I +W LL++C H ++E G+ A ++ L P S+ +Y++
Sbjct: 569 RAGRLADAEAFISNGIFHADPVIWRSLLASCRIHRDLERGQLVANRIMELEPTSSASYVI 628
Query: 542 MANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKT 601
+ N++ AG A+ R LM R + KEPG S +E+ V FVAGD+SH S I
Sbjct: 629 LYNMYLDAGELSLASKTRDLMKQRGVKKEPGLSWIELKCGVHSFVAGDKSHPESSAIYTK 688
Query: 602 LKEL 605
L+E+
Sbjct: 689 LEEM 692
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 123/466 (26%), Positives = 238/466 (51%), Gaps = 26/466 (5%)
Query: 66 FVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMW 125
F++ L+ Y + + +R++LDEMP R+ VS+N +I A+SR L ++ L
Sbjct: 44 FLRNTLLAAYCRLGGPLPARRLLDEMP--RRNAVSFNLLIDAYSREGLAPLSLETLARAR 101
Query: 126 VLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKV 181
G+++ ++ + ++ CS R G ++H G L++ + ++NS++SMY+K G++
Sbjct: 102 RAGVDVDRFSYAAALAACSRAGHLRAGRAVHALAILDG-LSSGVFVSNSLVSMYSKCGEM 160
Query: 182 NEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGC 241
EAR +FD E VSW +++ GYV G E + MRR + + ++I C
Sbjct: 161 GEARRVFDVAEERDDVSWNSLVSGYVRAGAREEMVRVFAMMRRGGMGLNSFALGSVIKCC 220
Query: 242 AQVGN--LFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFL 299
+ G+ + +A ++H ++K+G +++ L + ++ MY K G L A +F +V E +V +
Sbjct: 221 SGRGDGTMDIAEAVHGCVIKAGLDSDVFLVSAMIDMYAKKGALVEAAALFRSVQEPNVVM 280
Query: 300 WTSMIGGYAQ----LG--YPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKE 353
+ +MI G+ + +G SEA+ L+ + ++P E T ++ L AC G L GK+
Sbjct: 281 FNTMIAGFCRTETVIGKEVASEALTLYSEVQSRGMQPTEFTFSSVLRACNLAGYLEFGKQ 340
Query: 354 IEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGM 413
I ++ + + + ++LI ++ G + F P D+ W+AM++G + +
Sbjct: 341 IHGQVIKYTFQEDDFIGSALIDLYFNSGCMEDGFRCFRSSPKHDIVTWTAMVSGCVQNEL 400
Query: 414 GDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHY 473
++AL+LF++ GLKPD +S+++AC+ + G + +Q F + + +
Sbjct: 401 HEKALSLFHESLGA-GLKPDLFTISSVMNACASLAVARAG----EQIQC-FATKSGFDRF 454
Query: 474 LCL----VDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKH 515
+ V + R+G D A + EM W+ ++S +H
Sbjct: 455 TVMGNSCVHMYARSGDVDAATRRFQEMESH-DVVSWSAVISCHAQH 499
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 101/419 (24%), Positives = 192/419 (45%), Gaps = 21/419 (5%)
Query: 9 GSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANI--NSIWDGKRVHSHVLKVGFQQDAF 66
G+ EE + ++ M + G+ NSF V+K C+ ++ + VH V+K G D F
Sbjct: 189 GAREEMVRVFAMMRRGGMGLNSFALGSVIKCCSGRGDGTMDIAEAVHGCVIKAGLDSDVF 248
Query: 67 VQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRA------CLNDEAILV 120
+ + +IDMY+K V + + V+ +VV +N++I+ R + EA+ +
Sbjct: 249 LVSAMIDMYAKKGALVEAAALF--RSVQEPNVVMFNTMIAGFCRTETVIGKEVASEALTL 306
Query: 121 LKEMWVLGLELSASTFVSVVSGCSFRQ----GISMHCCVYKLGLLNNEIPLANSVMSMYA 176
E+ G++ + TF SV+ C+ G +H V K ++ + ++++ +Y
Sbjct: 307 YSEVQSRGMQPTEFTFSSVLRACNLAGYLEFGKQIHGQVIKYTFQEDDF-IGSALIDLYF 365
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
G + + F + IV+WT ++ G V +A L ++ + PDL +
Sbjct: 366 NSGCMEDGFRCFRSSPKHDIVTWTAMVSGCVQNELHEKALSLFHESLGAGLKPDLFTISS 425
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
++ CA + + KSG++ + N V MY + GD++ A R F +
Sbjct: 426 VMNACASLAVARAGEQIQCFATKSGFDRFTVMGNSCVHMYARSGDVDAATRRFQEMESHD 485
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEE 356
V W+++I +AQ G +A++ F ++ V PNE T L+AC+ G + +G +
Sbjct: 486 VVSWSAVISCHAQHGCARDALHFFDEMVDAKVVPNEITFLGVLTACSHGGLVDEG--LRY 543
Query: 357 YIVLN---GLESNRQVQTSLIHMFSKCGRINKAKEVFER-VPDKDLAVWSAMINGYAIH 411
Y +N GL + T ++ + + GR+ A+ + D +W +++ IH
Sbjct: 544 YETMNKDYGLSPTIKHCTCVVDLLGRAGRLADAEAFISNGIFHADPVIWRSLLASCRIH 602
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/275 (22%), Positives = 118/275 (42%), Gaps = 12/275 (4%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
M+ N E+ LS + L G+ + FT V+ ACA++ G+++ K G
Sbjct: 391 MVSGCVQNELHEKALSLFHESLGAGLKPDLFTISSVMNACASLAVARAGEQIQCFATKSG 450
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F + + + MY++ D ++ + EM VVSW+++IS H++ +A+
Sbjct: 451 FDRFTVMGNSCVHMYARSGDVDAATRRFQEMES--HDVVSWSAVISCHAQHGCARDALHF 508
Query: 121 LKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
EM + + TF+ V++ CS +G+ + + K L+ I V+ +
Sbjct: 509 FDEMVDAKVVPNEITFLGVLTACSHGGLVDEGLRYYETMNKDYGLSPTIKHCTCVVDLLG 568
Query: 177 KFGKVNEARS-IFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVT--PDLVV 233
+ G++ +A + I + I V W +++ ++ + N++ + T V+
Sbjct: 569 RAGRLADAEAFISNGIFHADPVIWRSLLASCRIHRDLERGQLVANRIMELEPTSSASYVI 628
Query: 234 FLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPL 268
N+ L G L LA L+ + G E L
Sbjct: 629 LYNMYL---DAGELSLASKTRDLMKQRGVKKEPGL 660
>gi|296088765|emb|CBI38215.3| unnamed protein product [Vitis vinifera]
Length = 595
Score = 326 bits (835), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 200/591 (33%), Positives = 320/591 (54%), Gaps = 54/591 (9%)
Query: 29 NSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDA--FVQTGLIDMYSKCSDFVSSRK 86
+ +F L+ C +I + K++H+ ++K DA + T L + ++ S + R
Sbjct: 36 HKLSFLSTLQTCKSIKGL---KQIHASIIKTMPSPDAQLTISTRLSALCAQ-SLPIDPRY 91
Query: 87 VLDEMP-VRLRSVVSWNSIISAHSRACLND--EAILVLKEMWVLGLELSASTFVSVVSGC 143
L + +R ++ +N+II + + ND E ++V K+M G+ T V+ C
Sbjct: 92 ALSLLAQLRTPNLPLYNAIIRGLATSN-NDSIEGLVVYKQMLSKGIVPDNYTIPFVLKAC 150
Query: 144 S----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSW 199
+ R+G +H K+GL + ++ ++N++M MYA + AR +FD + +VSW
Sbjct: 151 AESRAVREGEEVHGQAIKMGLAS-DVYVSNTLMRMYAVCDVIRSARKVFDTSPQRDLVSW 209
Query: 200 TTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLK 259
TT+I GYV +G E GL +R +V D+ V
Sbjct: 210 TTMIQGYVKMGFAREGVGL-YIIRNSNVNLDVFV-------------------------- 242
Query: 260 SGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNL 319
N LV MY KCGD AR+VF + K+V W SMI G AQ G E++ +
Sbjct: 243 ---------GNALVDMYLKCGDANFARKVFQEMPVKNVVSWNSMISGLAQKGQFKESLYM 293
Query: 320 FKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSK 379
F+++ + V+P++ TL L++CA LG L GK + Y+ N + ++ + +L+ M++K
Sbjct: 294 FRKMQRLGVKPDDVTLVAVLNSCANLGVLELGKWVHAYLDRNQIRADGFIGNALVDMYAK 353
Query: 380 CGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTS 439
CG I++A VF+ + KD+ ++AMI G A+HG G +AL+LF +M + G++PD V +
Sbjct: 354 CGSIDQACWVFQAMNRKDVYSYTAMIVGLAMHGQGGKALDLFSEMPKM-GIEPDEVTFVG 412
Query: 440 ILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVE 499
+L+ACSH G+V++G +F+ M + + + P +EHY C+VDLLGRAG + A + I MP+E
Sbjct: 413 VLTACSHVGLVEEGRKYFEDMSTIYNLRPQLEHYGCMVDLLGRAGLINEAEEFIRNMPIE 472
Query: 500 VQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATAR 559
A V LL AC H VELGE K + + P G Y+LM+N+++SA W++A R
Sbjct: 473 PDAFVLGALLGACKIHGKVELGESVMKKIEKIEPRKDGAYVLMSNIYSSANRWRDALKLR 532
Query: 560 GLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKEL--HIK 608
M +R L K PG S +E+DG + F GD+SH +I K L E+ H+K
Sbjct: 533 KTMKERNLEKTPGCSSIELDGVIHEFQKGDKSHPKIKEIYKLLDEIMSHLK 583
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 129/459 (28%), Positives = 227/459 (49%), Gaps = 39/459 (8%)
Query: 5 STNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQD 64
+T+N E L Y ML G+ +++T P VLKACA ++ +G+ VH +K+G D
Sbjct: 115 ATSNNDSIEGLVVYKQMLSKGIVPDNYTIPFVLKACAESRAVREGEEVHGQAIKMGLASD 174
Query: 65 AFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEM 124
+V L+ MY+ C S+RKV D P R +VSW ++I + +
Sbjct: 175 VYVSNTLMRMYAVCDVIRSARKVFDTSP--QRDLVSWTTMIQGYVK-------------- 218
Query: 125 WVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEA 184
+G R+G+ ++ + + +N ++ + N+++ MY K G N A
Sbjct: 219 --MGFA---------------REGVGLY--IIRNSNVNLDVFVGNALVDMYLKCGDANFA 259
Query: 185 RSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQV 244
R +F E+ ++VSW ++I G G E+ + +M+R+ V PD V + ++ CA +
Sbjct: 260 RKVFQEMPVKNVVSWNSMISGLAQKGQFKESLYMFRKMQRLGVKPDDVTLVAVLNSCANL 319
Query: 245 GNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMI 304
G L L +H+ L ++ + + N LV MY KCG ++ A VF A+ K V+ +T+MI
Sbjct: 320 GVLELGKWVHAYLDRNQIRADGFIGNALVDMYAKCGSIDQACWVFQAMNRKDVYSYTAMI 379
Query: 305 GGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKE-IEEYIVLNGL 363
G A G +A++LF + K + P+E T L+AC+ +G + +G++ E+ + L
Sbjct: 380 VGLAMHGQGGKALDLFSEMPKMGIEPDEVTFVGVLTACSHVGLVEEGRKYFEDMSTIYNL 439
Query: 364 ESNRQVQTSLIHMFSKCGRINKAKEVFERVP-DKDLAVWSAMINGYAIHGMGDQALNLFY 422
+ ++ + + G IN+A+E +P + D V A++ IHG + ++
Sbjct: 440 RPQLEHYGCMVDLLGRAGLINEAEEFIRNMPIEPDAFVLGALLGACKIHGKVELGESVMK 499
Query: 423 KMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQ 461
K++ +E K A V S + S + D L K+M+
Sbjct: 500 KIEKIEPRKDGAYVLMS--NIYSSANRWRDALKLRKTMK 536
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 72/144 (50%), Gaps = 2/144 (1%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI G F+E+L + M + GV + T VL +CAN+ + GK VH+++ +
Sbjct: 277 MISGLAQKGQFKESLYMFRKMQRLGVKPDDVTLVAVLNSCANLGVLELGKWVHAYLDRNQ 336
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+ D F+ L+DMY+KC + V M + V S+ ++I + +A+ +
Sbjct: 337 IRADGFIGNALVDMYAKCGSIDQACWVFQAM--NRKDVYSYTAMIVGLAMHGQGGKALDL 394
Query: 121 LKEMWVLGLELSASTFVSVVSGCS 144
EM +G+E TFV V++ CS
Sbjct: 395 FSEMPKMGIEPDEVTFVGVLTACS 418
>gi|297844796|ref|XP_002890279.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297336121|gb|EFH66538.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 953
Score = 325 bits (834), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 187/593 (31%), Positives = 320/593 (53%), Gaps = 18/593 (3%)
Query: 32 TFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEM 91
T VL CA I GK VH +K+ ++ V L+DMYSK + S +M
Sbjct: 278 TVVTVLPVCAREREIGVGKGVHGWAVKLSLDKELVVNNALMDMYSKWGCIIDS-----QM 332
Query: 92 PVRL---RSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSAS--TFVSVVSGCSFR 146
+L ++VVSWN+++ S +L++M ++ A T ++ V C F
Sbjct: 333 IFKLNNNKNVVSWNTMVGGFSAEGDIHGTFDLLRQMLAGSEDVKADEVTILNAVPVC-FD 391
Query: 147 QGI-----SMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTT 201
+ + +HC K + +E+ LAN+ ++ YAK G ++ A+ +F I ++ SW
Sbjct: 392 ESVLPSLKELHCYSLKQEFVYDEL-LANAFVASYAKCGSLSYAQRVFHGIRSKTLNSWNA 450
Query: 202 IIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSG 261
+IGGY + + QM+ + PD +L+ C+++ +L L +H ++++
Sbjct: 451 LIGGYAQSSDPRLSLDAHLQMKNSGLLPDNFTVCSLLSACSKLKSLRLGKEVHGFIIRNW 510
Query: 262 YNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFK 321
+ + ++S+Y CG+L + +FDA+ + S+ W ++I G+ Q G+P A+ LF+
Sbjct: 511 LERDLFVYLSVLSLYIHCGELCTVQVLFDAMEDNSLVSWNTVITGHLQNGFPERALGLFR 570
Query: 322 RLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCG 381
+++ ++P ++ T AC+ L SL G+E Y + + LE N + S+I M++K G
Sbjct: 571 QMVLYGIQPCGISMMTVFGACSLLPSLRLGREAHAYALKHLLEDNAFIACSIIDMYAKNG 630
Query: 382 RINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSIL 441
I ++ +VF + +K A W+AMI GY +HG +A+ LF +MQ G PD + + +L
Sbjct: 631 AITQSSKVFNGLKEKSAASWNAMIMGYGMHGRAKEAIKLFEEMQRT-GRNPDDLTFLGVL 689
Query: 442 SACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQ 501
+AC+HSG++ +GL + M+S+FG++P+++HY C++D+LGRAG+ D AL+ EM E
Sbjct: 690 TACNHSGLLHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDNALRVAAEMSEEPD 749
Query: 502 AQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGL 561
+W LLS C H N+E+GE A L L P NY+L++NL+ G W + R
Sbjct: 750 VGIWNSLLSWCRIHQNLEMGEKVAAKLFVLEPEKPENYVLLSNLYAGLGKWDDVRQVRQR 809
Query: 562 MDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKELHIKLLEAGY 614
M + L K+ G S +E++G V FV G+R +I+ L +K+ + GY
Sbjct: 810 MKEMSLRKDAGCSWIELNGKVFSFVVGERFLDGFEEIKSLWSILEMKIWKMGY 862
Score = 211 bits (538), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 139/452 (30%), Positives = 237/452 (52%), Gaps = 23/452 (5%)
Query: 1 MIRNSTNNGSFEETLSTYSSML-QTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKV 59
+I + + N + E L + M+ +T + ++FTFP V+KACA I+ + G VH V+K
Sbjct: 157 VISSYSRNELYHEVLEMFIKMISKTHLLPDNFTFPCVIKACAGISDVGIGLAVHGLVVKT 216
Query: 60 GFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAIL 119
G +D FV L+ Y + K+ D MP R++VSWNS+I S +D A +
Sbjct: 217 GLVEDLFVGNALVSFYGTHGFVSDALKLFDIMPE--RNLVSWNSMIRVFSDNG-DDGAFM 273
Query: 120 VLKEMWVLGLELSASTFVSVVSGCSFRQ----GISMHCCVYKLGLLNNEIPLANSVMSMY 175
+T V+V+ C+ + G +H KL L+ E+ + N++M MY
Sbjct: 274 P-----------DVATVVTVLPVCAREREIGVGKGVHGWAVKLS-LDKELVVNNALMDMY 321
Query: 176 AKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMS--VTPDLVV 233
+K+G + +++ IF ++VSW T++GG+ G+++ F L QM S V D V
Sbjct: 322 SKWGCIIDSQMIFKLNNNKNVVSWNTMVGGFSAEGDIHGTFDLLRQMLAGSEDVKADEVT 381
Query: 234 FLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVL 293
LN + C L +H LK + ++ L N V+ Y KCG L A+RVF +
Sbjct: 382 ILNAVPVCFDESVLPSLKELHCYSLKQEFVYDELLANAFVASYAKCGSLSYAQRVFHGIR 441
Query: 294 EKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKE 353
K++ W ++IGGYAQ P +++ ++ + + P+ T+ + LSAC++L SL GKE
Sbjct: 442 SKTLNSWNALIGGYAQSSDPRLSLDAHLQMKNSGLLPDNFTVCSLLSACSKLKSLRLGKE 501
Query: 354 IEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGM 413
+ +I+ N LE + V S++ ++ CG + + +F+ + D L W+ +I G+ +G
Sbjct: 502 VHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQVLFDAMEDNSLVSWNTVITGHLQNGF 561
Query: 414 GDQALNLFYKMQHVEGLKPDAVVYTSILSACS 445
++AL LF +M + G++P + ++ ACS
Sbjct: 562 PERALGLFRQMV-LYGIQPCGISMMTVFGACS 592
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 111/419 (26%), Positives = 208/419 (49%), Gaps = 24/419 (5%)
Query: 35 LVLKACANINSIWDGKRVHSHVL-KVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPV 93
L+L+A I G+++H V + D + T +I MY+ C SR D +
Sbjct: 89 LLLQASGKRKDIEMGRKIHHLVSGSTRLRSDDVLCTRIITMYAMCGSPDDSRSAFDAL-- 146
Query: 94 RLRSVVSWNSIISAHSRACLNDEAI-LVLKEMWVLGLELSASTFVSVVSGCS----FRQG 148
R +++ WN++IS++SR L E + + +K + L TF V+ C+ G
Sbjct: 147 RSKNLFQWNAVISSYSRNELYHEVLEMFIKMISKTHLLPDNFTFPCVIKACAGISDVGIG 206
Query: 149 ISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVN 208
+++H V K GL+ ++ + N+++S Y G V++A +FD + E ++VSW ++I + +
Sbjct: 207 LAVHGLVVKTGLV-EDLFVGNALVSFYGTHGFVSDALKLFDIMPERNLVSWNSMIRVFSD 265
Query: 209 VGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPL 268
G+ + AF PD+ + ++ CA+ + + +H +K + E +
Sbjct: 266 NGD-DGAF-----------MPDVATVVTVLPVCAREREIGVGKGVHGWAVKLSLDKELVV 313
Query: 269 DNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTS- 327
+N L+ MY+K G + ++ +F K+V W +M+GG++ G +L +++L S
Sbjct: 314 NNALMDMYSKWGCIIDSQMIFKLNNNKNVVSWNTMVGGFSAEGDIHGTFDLLRQMLAGSE 373
Query: 328 -VRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKA 386
V+ +E T+ + C + L KE+ Y + + + + + ++KCG ++ A
Sbjct: 374 DVKADEVTILNAVPVCFDESVLPSLKELHCYSLKQEFVYDELLANAFVASYAKCGSLSYA 433
Query: 387 KEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACS 445
+ VF + K L W+A+I GYA +L+ +M++ GL PD S+LSACS
Sbjct: 434 QRVFHGIRSKTLNSWNALIGGYAQSSDPRLSLDAHLQMKN-SGLLPDNFTVCSLLSACS 491
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 83/331 (25%), Positives = 153/331 (46%), Gaps = 21/331 (6%)
Query: 116 EAILVLKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGLLNNEIPLANSVMSMY 175
+ L+++E LGL L AS + G +H V L ++ L +++MY
Sbjct: 78 DVFLLVRE--ALGLLLQASGKRKDI-----EMGRKIHHLVSGSTRLRSDDVLCTRIITMY 130
Query: 176 AKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQM-RRMSVTPDLVVF 234
A G +++RS FD + ++ W +I Y +E + +M + + PD F
Sbjct: 131 AMCGSPDDSRSAFDALRSKNLFQWNAVISSYSRNELYHEVLEMFIKMISKTHLLPDNFTF 190
Query: 235 LNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLE 294
+I CA + ++ + L++H L++K+G + + N LVS Y G + A ++FD + E
Sbjct: 191 PCVIKACAGISDVGIGLAVHGLVVKTGLVEDLFVGNALVSFYGTHGFVSDALKLFDIMPE 250
Query: 295 KSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEI 354
+++ W SMI ++ G + P+ AT+ T L CA + GK +
Sbjct: 251 RNLVSWNSMIRVFSDNGDDG------------AFMPDVATVVTVLPVCAREREIGVGKGV 298
Query: 355 EEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMG 414
+ V L+ V +L+ M+SK G I ++ +F+ +K++ W+ M+ G++ G
Sbjct: 299 HGWAVKLSLDKELVVNNALMDMYSKWGCIIDSQMIFKLNNNKNVVSWNTMVGGFSAEGDI 358
Query: 415 DQALNLFYKM-QHVEGLKPDAVVYTSILSAC 444
+L +M E +K D V + + C
Sbjct: 359 HGTFDLLRQMLAGSEDVKADEVTILNAVPVC 389
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 105/225 (46%), Gaps = 23/225 (10%)
Query: 264 NEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRL 323
++D L +++MY CG + +R FDA+ K++F W ++I Y++ E + +F ++
Sbjct: 118 SDDVLCTRIITMYAMCGSPDDSRSAFDALRSKNLFQWNAVISSYSRNELYHEVLEMFIKM 177
Query: 324 L-KTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGR 382
+ KT + P+ T + ACA + + G + +V GL + V +L+ + G
Sbjct: 178 ISKTHLLPDNFTFPCVIKACAGISDVGIGLAVHGLVVKTGLVEDLFVGNALVSFYGTHGF 237
Query: 383 INKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILS 442
++ A ++F+ +P+++L W++MI ++ +G D A PD ++L
Sbjct: 238 VSDALKLFDIMPERNLVSWNSMIRVFSDNG-DDGA------------FMPDVATVVTVLP 284
Query: 443 ACSHSGMVDDG---------LSFFKSMQSNFGIEPSIEHYLCLVD 478
C+ + G LS K + N + + C++D
Sbjct: 285 VCAREREIGVGKGVHGWAVKLSLDKELVVNNALMDMYSKWGCIID 329
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 98/215 (45%), Gaps = 17/215 (7%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+I NG E L + M+ G+ + V AC+ + S+ G+ H++ LK
Sbjct: 552 VITGHLQNGFPERALGLFRQMVLYGIQPCGISMMTVFGACSLLPSLRLGREAHAYALKHL 611
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+ +AF+ +IDMY+K S KV + + + +S SWN++I + EAI +
Sbjct: 612 LEDNAFIACSIIDMYAKNGAITQSSKVFNGL--KEKSAASWNAMIMGYGMHGRAKEAIKL 669
Query: 121 LKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGLLNNEIPLANS------VMSM 174
+EM G TF+ V++ C+ G+ +H + L + + L + V+ M
Sbjct: 670 FEEMQRTGRNPDDLTFLGVLTACN-HSGL-LHEGLRYLDQMKSSFGLKPNLKHYACVIDM 727
Query: 175 YAKFGKVNEARSIFDEIGE-------TSIVSWTTI 202
+ G+++ A + E+ E S++SW I
Sbjct: 728 LGRAGQLDNALRVAAEMSEEPDVGIWNSLLSWCRI 762
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 74/166 (44%), Gaps = 4/166 (2%)
Query: 334 TLATTLSACAELGSLSKGKEIEEYIV-LNGLESNRQVQTSLIHMFSKCGRINKAKEVFER 392
L L A + + G++I + L S+ + T +I M++ CG + ++ F+
Sbjct: 86 ALGLLLQASGKRKDIEMGRKIHHLVSGSTRLRSDDVLCTRIITMYAMCGSPDDSRSAFDA 145
Query: 393 VPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDD 452
+ K+L W+A+I+ Y+ + + + L +F KM L PD + ++ AC +G+ D
Sbjct: 146 LRSKNLFQWNAVISSYSRNELYHEVLEMFIKMISKTHLLPDNFTFPCVIKAC--AGISDV 203
Query: 453 GLSF-FKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMP 497
G+ + G+ + LV G G ALK MP
Sbjct: 204 GIGLAVHGLVVKTGLVEDLFVGNALVSFYGTHGFVSDALKLFDIMP 249
>gi|242076522|ref|XP_002448197.1| hypothetical protein SORBIDRAFT_06g022800 [Sorghum bicolor]
gi|241939380|gb|EES12525.1| hypothetical protein SORBIDRAFT_06g022800 [Sorghum bicolor]
Length = 766
Score = 325 bits (834), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 191/624 (30%), Positives = 326/624 (52%), Gaps = 11/624 (1%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+I N + + +SSML++G + F + AC+ + + G++VH+ +K
Sbjct: 119 VIAAHAQNSRCADAMGLFSSMLRSGTMPDQFALGSAICACSELGDLGLGRQVHAQAIKWE 178
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
D VQ L+ MYSK + + +R + ++SW SII+ ++ +A+ +
Sbjct: 179 SGSDLIVQNALVTMYSKSGSVGDGFALFER--IRDKDLISWGSIIAGLAQQGREMDALQI 236
Query: 121 LKEMWVLGLELSAS-TFVSVVSGCS-----FRQGISMHCCVYKLGLLNNEIPLANSVMSM 174
+EM G+ F SV CS G +H K L N S+ M
Sbjct: 237 FREMIAEGVHHPNEFHFGSVFRACSVVVNSLEYGEQIHGVSVKYQLDRNSYA-GCSLSDM 295
Query: 175 YAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVF 234
YA+ +++ AR +F I +VSW ++I + G ++EA L ++MR + PD +
Sbjct: 296 YARCNELDSARKVFYRIESPDLVSWNSLINAFSAKGLLSEAMVLFSEMRDSGLRPDGITV 355
Query: 235 LNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLE 294
+ L+ C L S+HS L+K G + + N L+SMY +C D A VF +
Sbjct: 356 MALLCACVGYDALHQGRSIHSYLVKLGLGGDVIVSNSLLSMYARCLDFSSAMDVFHETHD 415
Query: 295 KSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEI 354
+ V W S++ Q + + LF L ++ + +L LSA AELG K++
Sbjct: 416 RDVVTWNSILTACVQHQHLEDVFKLFSLLHRSMPSLDRISLNNVLSASAELGYFEMVKQV 475
Query: 355 EEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERV-PDKDLAVWSAMINGYAIHGM 413
Y GL + + LI ++KCG ++ A ++FE + +D+ WS++I GYA G
Sbjct: 476 HAYAFKVGLVGDAMLSNGLIDTYAKCGSLDDANKLFEIMGTGRDVFSWSSLIVGYAQFGY 535
Query: 414 GDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHY 473
+AL+LF +M+++ G+KP+ V + +L+ACS G+VD+G ++ M+ +GI P+ EH
Sbjct: 536 AKEALDLFARMRNL-GVKPNHVTFVGVLTACSRVGLVDEGCYYYSIMKPEYGIVPTREHC 594
Query: 474 LCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNP 533
C++DLL RAGR A K + +MP E +W LL+A H++V++G+ AA+ +L ++P
Sbjct: 595 SCVLDLLARAGRLSEAAKFVDQMPFEPDIIMWKTLLAASRTHNDVDMGKRAAEGVLNIDP 654
Query: 534 GSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHH 593
+ Y+L+ N++ S+G W E A + M + K PG S +++ G ++VF+ DRSH
Sbjct: 655 SHSAAYVLLCNIYASSGNWNEFARLKKDMRSSGVQKSPGKSWIKLKGELKVFIVEDRSHP 714
Query: 594 LSVDIRKTLKELHIKLLEAGYIAE 617
S +I L+ + +++++AGYI E
Sbjct: 715 ESDEIYTMLEVIGLEMVKAGYIPE 738
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 102/362 (28%), Positives = 184/362 (50%), Gaps = 6/362 (1%)
Query: 160 LLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLC 219
L +N I L+N +++MY + G + AR +FD + + + VSW +I + +A GL
Sbjct: 78 LAHNTI-LSNHLITMYGRCGAPDSARVVFDGMLDRNPVSWAAVIAAHAQNSRCADAMGLF 136
Query: 220 NQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKC 279
+ M R PD + I C+++G+L L +H+ +K ++ + N LV+MY+K
Sbjct: 137 SSMLRSGTMPDQFALGSAICACSELGDLGLGRQVHAQAIKWESGSDLIVQNALVTMYSKS 196
Query: 280 GDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSV-RPNEATLATT 338
G + +F+ + +K + W S+I G AQ G +A+ +F+ ++ V PNE +
Sbjct: 197 GSVGDGFALFERIRDKDLISWGSIIAGLAQQGREMDALQIFREMIAEGVHHPNEFHFGSV 256
Query: 339 LSACA-ELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKD 397
AC+ + SL G++I V L+ N SL M+++C ++ A++VF R+ D
Sbjct: 257 FRACSVVVNSLEYGEQIHGVSVKYQLDRNSYAGCSLSDMYARCNELDSARKVFYRIESPD 316
Query: 398 LAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFF 457
L W+++IN ++ G+ +A+ LF +M+ GL+PD + ++L AC + G S
Sbjct: 317 LVSWNSLINAFSAKGLLSEAMVLFSEMRD-SGLRPDGITVMALLCACVGYDALHQGRS-I 374
Query: 458 KSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHN 517
S G+ + L+ + R F A+ HE + W +L+AC++H +
Sbjct: 375 HSYLVKLGLGGDVIVSNSLLSMYARCLDFSSAMDVFHETH-DRDVVTWNSILTACVQHQH 433
Query: 518 VE 519
+E
Sbjct: 434 LE 435
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 107/419 (25%), Positives = 196/419 (46%), Gaps = 13/419 (3%)
Query: 40 CANINSIWDGKRVHSHVLKVG-----FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVR 94
C+ + S+ G+ VH H+L + + LI MY +C S+R V D M
Sbjct: 52 CSRLRSLPQGRLVHRHLLASSARDRFLAHNTILSNHLITMYGRCGAPDSARVVFDGMLD- 110
Query: 95 LRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCSFRQGISMHCC 154
R+ VSW ++I+AH++ +A+ + M G S + CS + +
Sbjct: 111 -RNPVSWAAVIAAHAQNSRCADAMGLFSSMLRSGTMPDQFALGSAICACSELGDLGLGRQ 169
Query: 155 VYKLGLL---NNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGN 211
V+ + +++ + N++++MY+K G V + ++F+ I + ++SW +II G G
Sbjct: 170 VHAQAIKWESGSDLIVQNALVTMYSKSGSVGDGFALFERIRDKDLISWGSIIAGLAQQGR 229
Query: 212 VNEAFGLCNQMRRMSV-TPDLVVFLNLILGCAQVGN-LFLALSMHSLLLKSGYNNEDPLD 269
+A + +M V P+ F ++ C+ V N L +H + +K +
Sbjct: 230 EMDALQIFREMIAEGVHHPNEFHFGSVFRACSVVVNSLEYGEQIHGVSVKYQLDRNSYAG 289
Query: 270 NLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVR 329
L MY +C +L+ AR+VF + + W S+I ++ G SEA+ LF + + +R
Sbjct: 290 CSLSDMYARCNELDSARKVFYRIESPDLVSWNSLINAFSAKGLLSEAMVLFSEMRDSGLR 349
Query: 330 PNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEV 389
P+ T+ L AC +L +G+ I Y+V GL + V SL+ M+++C + A +V
Sbjct: 350 PDGITVMALLCACVGYDALHQGRSIHSYLVKLGLGGDVIVSNSLLSMYARCLDFSSAMDV 409
Query: 390 FERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSG 448
F D+D+ W++++ H + LF + H D + ++LSA + G
Sbjct: 410 FHETHDRDVVTWNSILTACVQHQHLEDVFKLF-SLLHRSMPSLDRISLNNVLSASAELG 467
>gi|449475140|ref|XP_004154387.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
gi|449522468|ref|XP_004168248.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
Length = 574
Score = 325 bits (834), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 171/488 (35%), Positives = 278/488 (56%), Gaps = 7/488 (1%)
Query: 134 STFVSVVSGCSFRQGI----SMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFD 189
S + S++ C R+ I +H + ++G+ N + LA ++++Y + A +FD
Sbjct: 2 SYYASLLQSCVVRKAIEPGKQLHARICQVGISFNPL-LATKLVNLYCICNSLTNAHLLFD 60
Query: 190 EIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFL 249
I + ++ W +I GY G A L QMR + PD F ++ C+ + +
Sbjct: 61 RISKRNLFLWNVMIRGYAWNGPYELAISLYYQMRDYGLVPDKFTFPFVLKACSALSAMEE 120
Query: 250 ALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQ 309
+H +++SG ++ + L+ MY KCG +E AR+VFD + E+ V W SM+ Y+Q
Sbjct: 121 GKKIHKDVIRSGLESDVFVGAALIDMYAKCGCVESARQVFDKIDERDVVCWNSMLATYSQ 180
Query: 310 LGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQV 369
G P E++ L + + ++P E T +++A A+ G L +GKE+ Y +G ESN +V
Sbjct: 181 NGQPDESLALCRVMAFNGLKPTEGTFVISIAASADNGLLPQGKELHGYSWRHGFESNDKV 240
Query: 370 QTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEG 429
+T+L+ M++K G +N A+ +FE + +K + W+AMI GYA+HG ++AL+LF +M+
Sbjct: 241 KTALMDMYAKSGSVNVARSLFELLEEKRVVSWNAMITGYAMHGHANEALDLFKEMK--GK 298
Query: 430 LKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLA 489
+ PD + + +L+ACSH G++++G F+SM S+F I P+++HY C++DLLG GR + A
Sbjct: 299 VLPDHITFVGVLAACSHGGLLNEGKMHFRSMISDFNIWPTVQHYTCMIDLLGHCGRLEEA 358
Query: 490 LKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSA 549
K I EM VE A VW LL +C H NVE+GE A + L+ L P GNY++++N++ A
Sbjct: 359 YKLIMEMRVEPDAGVWGALLHSCKIHGNVEMGELALEKLVELEPDDGGNYVILSNMYAQA 418
Query: 550 GMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKELHIKL 609
G W A R LM ++ L K S +E+ V F++ D SH S I LK +
Sbjct: 419 GKWDGVARLRDLMMNKGLKKSIACSWIEVGNKVHAFLSEDTSHPKSEAIYAELKRTGKLM 478
Query: 610 LEAGYIAE 617
EAGY +
Sbjct: 479 KEAGYAPQ 486
Score = 181 bits (460), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 128/447 (28%), Positives = 218/447 (48%), Gaps = 19/447 (4%)
Query: 33 FPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMP 92
+ +L++C +I GK++H+ + +VG + + T L+++Y C+ ++ + D
Sbjct: 4 YASLLQSCVVRKAIEPGKQLHARICQVGISFNPLLATKLVNLYCICNSLTNAHLLFDR-- 61
Query: 93 VRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCS----FRQG 148
+ R++ WN +I ++ + AI + +M GL TF V+ CS +G
Sbjct: 62 ISKRNLFLWNVMIRGYAWNGPYELAISLYYQMRDYGLVPDKFTFPFVLKACSALSAMEEG 121
Query: 149 ISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVN 208
+H V + G L +++ + +++ MYAK G V AR +FD+I E +V W +++ Y
Sbjct: 122 KKIHKDVIRSG-LESDVFVGAALIDMYAKCGCVESARQVFDKIDERDVVCWNSMLATYSQ 180
Query: 209 VGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPL 268
G +E+ LC M + P F+ I A G L +H + G+ + D +
Sbjct: 181 NGQPDESLALCRVMAFNGLKPTEGTFVISIAASADNGLLPQGKELHGYSWRHGFESNDKV 240
Query: 269 DNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSV 328
L+ MY K G + +AR +F+ + EK V W +MI GYA G+ +EA++LFK +K V
Sbjct: 241 KTALMDMYAKSGSVNVARSLFELLEEKRVVSWNAMITGYAMHGHANEALDLFKE-MKGKV 299
Query: 329 RPNEATLATTLSACAELGSLSKGK-EIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKA- 386
P+ T L+AC+ G L++GK I + Q T +I + CGR+ +A
Sbjct: 300 LPDHITFVGVLAACSHGGLLNEGKMHFRSMISDFNIWPTVQHYTCMIDLLGHCGRLEEAY 359
Query: 387 KEVFERVPDKDLAVWSAMINGYAIHG---MGDQALNLFYKMQHVEGLKPDAVVYTSILSA 443
K + E + D VW A+++ IHG MG+ AL + L+PD ILS
Sbjct: 360 KLIMEMRVEPDAGVWGALLHSCKIHGNVEMGELALEKLVE------LEPDDGGNYVILSN 413
Query: 444 CSHSGMVDDGLSFFKSMQSNFGIEPSI 470
DG++ + + N G++ SI
Sbjct: 414 MYAQAGKWDGVARLRDLMMNKGLKKSI 440
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 101/311 (32%), Positives = 171/311 (54%), Gaps = 12/311 (3%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MIR NG +E +S Y M G+ + FTFP VLKAC+ ++++ +GK++H V++ G
Sbjct: 73 MIRGYAWNGPYELAISLYYQMRDYGLVPDKFTFPFVLKACSALSAMEEGKKIHKDVIRSG 132
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+ D FV LIDMY+KC S+R+V D+ + R VV WNS+++ +S+ DE++ +
Sbjct: 133 LESDVFVGAALIDMYAKCGCVESARQVFDK--IDERDVVCWNSMLATYSQNGQPDESLAL 190
Query: 121 LKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
+ M GL+ + TFV ++ + QG +H ++ G +N+ + ++M MYA
Sbjct: 191 CRVMAFNGLKPTEGTFVISIAASADNGLLPQGKELHGYSWRHGFESND-KVKTALMDMYA 249
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K G VN ARS+F+ + E +VSW +I GY G+ NEA L +M+ V PD + F+
Sbjct: 250 KSGSVNVARSLFELLEEKRVVSWNAMITGYAMHGHANEALDLFKEMKG-KVLPDHITFVG 308
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNL--LVSMYTKCGDLELARR-VFDAVL 293
++ C+ G L MH + S +N + + ++ + CG LE A + + + +
Sbjct: 309 VLAACSH-GGLLNEGKMHFRSMISDFNIWPTVQHYTCMIDLLGHCGRLEEAYKLIMEMRV 367
Query: 294 EKSVFLWTSMI 304
E +W +++
Sbjct: 368 EPDAGVWGALL 378
>gi|302756099|ref|XP_002961473.1| hypothetical protein SELMODRAFT_77426 [Selaginella moellendorffii]
gi|300170132|gb|EFJ36733.1| hypothetical protein SELMODRAFT_77426 [Selaginella moellendorffii]
Length = 643
Score = 325 bits (834), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 177/556 (31%), Positives = 309/556 (55%), Gaps = 10/556 (1%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
M+ +NG E L + + G+ ++ T LKACA + +G+ +H+ +G
Sbjct: 84 MLGAYADNGHGREALGLFREIQSRGMAIDNVTLVSALKACAVAGDLEEGRGIHASARSLG 143
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
++ + V T L+ MY KC ++ V + R R VSWN++++A+++ +EA+ +
Sbjct: 144 YESEIIVATALVSMYGKCGHLEEAKAVFATLVERNR--VSWNAMLAAYAQNGHCEEAVRL 201
Query: 121 LKEMWVLGLELSASTFVSVVSG--CSFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKF 178
+ M G++ A+TFVSV+ G G +H V + G +N LAN+++SMY
Sbjct: 202 YRLMCFEGIKPDATTFVSVLDGWKGEGEHGTRIHDQVLESGFGSN-TTLANALVSMYGSG 260
Query: 179 GKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGL---CNQMRRMSVTPDLVVFL 235
G+V++AR +FD I E ++VSW ++ Y G +A L ++MRR V P+ V F+
Sbjct: 261 GRVDDARYVFDGIAEKTVVSWNAMLTAYAQNGRYGKAVDLFWKMDEMRRALVEPNSVTFV 320
Query: 236 NLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEK 295
NL++ CA G L +H+ + G + + L++MY++CG+L LA+ VFD+V K
Sbjct: 321 NLLVACAATGFLEAGRKIHAEVASLGLLSTLSVGGALINMYSECGNLVLAKSVFDSVPHK 380
Query: 296 SVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIE 355
++ W +IG YA G EA+ + +++ ++P++ T + L AC+ +L++GK I
Sbjct: 381 NLVSWNVLIGSYAGDGDGKEALGVHQKMELEGLKPDKFTFISVLHACSASEALAEGKAIH 440
Query: 356 EYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVF-ERVPDKDLAVWSAMINGYAIHGMG 414
I +GLE + + T+LI+++ KCG + +A+ VF + ++L W++M+ G
Sbjct: 441 ALIAASGLERDEAIGTALINLYGKCGSLEQARNVFLDMKSRRNLVTWNSMLAAACTKGGL 500
Query: 415 DQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYL 474
+ + + + M +EG+ PD + + S+L ACSH G + GL F S ++GI + +HY+
Sbjct: 501 EDCVEIIH-MMGLEGIMPDELTFLSVLFACSHGGSIQQGLDLFLSAGVDYGIATNTKHYV 559
Query: 475 CLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPG 534
C+VD+LGR GR + A + ++ MP + W LL AC H + E G AA ++ L+P
Sbjct: 560 CVVDILGRVGRLEEAQEVLNRMPFQANDVAWMTLLGACRIHRDFEQGRRAADYVIELDPQ 619
Query: 535 STGNYILMANLFTSAG 550
+ Y L++ +F+ AG
Sbjct: 620 NAAPYALLSTMFSVAG 635
Score = 242 bits (618), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 152/487 (31%), Positives = 248/487 (50%), Gaps = 15/487 (3%)
Query: 36 VLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRL 95
+L+ CA+ + K+ + + GF D ++ L+ Y KC +R+V D ++
Sbjct: 18 ILRDCASARDLTAAKQAQWEIARDGFGGDRYLGNLLVQAYGKCGSVRDAREVFDR--IQR 75
Query: 96 RSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCS----FRQGISM 151
R++ SW ++ A++ EA+ + +E+ G+ + T VS + C+ +G +
Sbjct: 76 RNIFSWTIMLGAYADNGHGREALGLFREIQSRGMAIDNVTLVSALKACAVAGDLEEGRGI 135
Query: 152 HCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGN 211
H LG +EI +A +++SMY K G + EA+++F + E + VSW ++ Y G+
Sbjct: 136 HASARSLG-YESEIIVATALVSMYGKCGHLEEAKAVFATLVERNRVSWNAMLAAYAQNGH 194
Query: 212 VNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNL 271
EA L M + PD F++++ G G +H +L+SG+ + L N
Sbjct: 195 CEEAVRLYRLMCFEGIKPDATTFVSVLDGWKGEGE--HGTRIHDQVLESGFGSNTTLANA 252
Query: 272 LVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLF---KRLLKTSV 328
LVSMY G ++ AR VFD + EK+V W +M+ YAQ G +AV+LF + + V
Sbjct: 253 LVSMYGSGGRVDDARYVFDGIAEKTVVSWNAMLTAYAQNGRYGKAVDLFWKMDEMRRALV 312
Query: 329 RPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKE 388
PN T L ACA G L G++I + GL S V +LI+M+S+CG + AK
Sbjct: 313 EPNSVTFVNLLVACAATGFLEAGRKIHAEVASLGLLSTLSVGGALINMYSECGNLVLAKS 372
Query: 389 VFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSG 448
VF+ VP K+L W+ +I YA G G +AL + KM+ +EGLKPD + S+L ACS S
Sbjct: 373 VFDSVPHKNLVSWNVLIGSYAGDGDGKEALGVHQKME-LEGLKPDKFTFISVLHACSASE 431
Query: 449 MVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPL 508
+ +G + + ++ G+E L++L G+ G + A +M W +
Sbjct: 432 ALAEGKAIHALIAAS-GLERDEAIGTALINLYGKCGSLEQARNVFLDMKSRRNLVTWNSM 490
Query: 509 L-SACMK 514
L +AC K
Sbjct: 491 LAAACTK 497
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 88/277 (31%), Positives = 144/277 (51%), Gaps = 7/277 (2%)
Query: 236 NLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEK 295
+++ CA +L A + + G+ + L NLLV Y KCG + AR VFD + +
Sbjct: 17 SILRDCASARDLTAAKQAQWEIARDGFGGDRYLGNLLVQAYGKCGSVRDAREVFDRIQRR 76
Query: 296 SVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIE 355
++F WT M+G YA G+ EA+ LF+ + + + TL + L ACA G L +G+ I
Sbjct: 77 NIFSWTIMLGAYADNGHGREALGLFREIQSRGMAIDNVTLVSALKACAVAGDLEEGRGIH 136
Query: 356 EYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGD 415
G ES V T+L+ M+ KCG + +AK VF + +++ W+AM+ YA +G +
Sbjct: 137 ASARSLGYESEIIVATALVSMYGKCGHLEEAKAVFATLVERNRVSWNAMLAAYAQNGHCE 196
Query: 416 QALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFF-KSMQSNFGIEPSIEHYL 474
+A+ L Y++ EG+KPDA + S+L G + G + ++S FG ++ +
Sbjct: 197 EAVRL-YRLMCFEGIKPDATTFVSVLDGWKGEG--EHGTRIHDQVLESGFGSNTTLAN-- 251
Query: 475 CLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSA 511
LV + G GR D A + + + E W +L+A
Sbjct: 252 ALVSMYGSGGRVDDA-RYVFDGIAEKTVVSWNAMLTA 287
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 93/184 (50%), Gaps = 3/184 (1%)
Query: 336 ATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPD 395
A+ L CA L+ K+ + I +G +R + L+ + KCG + A+EVF+R+
Sbjct: 16 ASILRDCASARDLTAAKQAQWEIARDGFGGDRYLGNLLVQAYGKCGSVRDAREVFDRIQR 75
Query: 396 KDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLS 455
+++ W+ M+ YA +G G +AL LF ++Q G+ D V S L AC+ +G +++G
Sbjct: 76 RNIFSWTIMLGAYADNGHGREALGLFREIQS-RGMAIDNVTLVSALKACAVAGDLEEGRG 134
Query: 456 FFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKH 515
S +S G E I LV + G+ G + A K + VE W +L+A ++
Sbjct: 135 IHASARS-LGYESEIIVATALVSMYGKCGHLEEA-KAVFATLVERNRVSWNAMLAAYAQN 192
Query: 516 HNVE 519
+ E
Sbjct: 193 GHCE 196
>gi|359482518|ref|XP_002279880.2| PREDICTED: uncharacterized protein LOC100266920 [Vitis vinifera]
Length = 1753
Score = 325 bits (834), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 193/649 (29%), Positives = 327/649 (50%), Gaps = 81/649 (12%)
Query: 50 KRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVR-LRSVVSWNSIISAH 108
+++HS ++ G + AF+ ++ +Y+ +++V + P+ +++ WNSI+ A+
Sbjct: 889 QQIHSQIIVTGSHRSAFLAARVVSVYAGFGLVSDAQRVFEVSPIECFSNLLLWNSILRAN 948
Query: 109 SRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCSF----RQGISMHCCVYKLGLLNNE 164
+EA+ + M LG+ TF V+ C+ + S+H V ++G N
Sbjct: 949 VAHGYCEEALEIYCRMRKLGVSADGFTFPLVIRACALMGSRKLCRSVHGHVVEMGFQWN- 1007
Query: 165 IPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRR 224
+ + N +M MY K G++++AR +F+ + S VSW T++ GY + + A + M
Sbjct: 1008 LHVGNELMGMYGKIGRMDDARKVFERMAVRSCVSWNTMVSGYALNYDCHGASEMFRMMGS 1067
Query: 225 MSVTPDLVVFLNLILGCAQVGN------LFLALSM------------------------- 253
+ P+LV + +L+ A+ G LF + M
Sbjct: 1068 AGLEPNLVTWTSLLSSHARCGQHVETMELFGRMRMRGIGATAEALAVVLSVSVDLAAFDE 1127
Query: 254 ----HSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQ 309
H ++K G+ N + N L+ +Y K G++ AR +F + K++ W ++I YA
Sbjct: 1128 GKVIHGYVVKGGFENYLFVKNSLICLYGKHGNVNAARILFLEIKTKNIVSWNALISSYAD 1187
Query: 310 LG-----------------YP----------------------SEAVNLFKRLLKTSVRP 330
LG YP EA+ LF+R+ V+
Sbjct: 1188 LGWCDEAFAIFLQLEKTDEYPMVRPNVVSWSAVIGGFASKGQGEEALELFRRMQLAKVKA 1247
Query: 331 NEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVF 390
N T+A+ LS CAEL +L G+EI ++V + ++ N V LI+M++K G + VF
Sbjct: 1248 NSVTIASVLSVCAELAALHLGREIHGHVVRSLMDGNILVGNGLINMYTKSGSFKEGNLVF 1307
Query: 391 ERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMV 450
E++ +KDL W+ M+ GY IHG+G+ A+ F +M +G +PD V + ++LSACSH+G+V
Sbjct: 1308 EKIENKDLISWNTMVAGYGIHGLGENAIRTFDQMIK-DGFEPDGVTFVAVLSACSHAGLV 1366
Query: 451 DDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLS 510
+G F M F +EP +EHY C+VDLLGRAG A K + MPVE A VW LL+
Sbjct: 1367 AEGRELFDKMIKEFRVEPQMEHYACMVDLLGRAGLLQEASKVVKSMPVEPNACVWGALLN 1426
Query: 511 ACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKE 570
+C H N E+ E A + LN G+Y+L++N++ ++G W+++A R + L K
Sbjct: 1427 SCRMHKNTEVAEETASQIFNLNSEIAGSYMLLSNIYAASGRWEDSAKVRISAKTKGLKKT 1486
Query: 571 PGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKELHIKLLEAGYIAEAD 619
PG S +++ V +F AG+ H ++ + LK+L +++ GYI + D
Sbjct: 1487 PGQSWIQVKKKVYMFSAGNTQHAELEEVYRILKDLGLQMEVEGYIPDID 1535
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 128/489 (26%), Positives = 226/489 (46%), Gaps = 79/489 (16%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
++R + +G EE L Y M + GV + FTFPLV++ACA + S + VH HV+++G
Sbjct: 944 ILRANVAHGYCEEALEIYCRMRKLGVSADGFTFPLVIRACALMGSRKLCRSVHGHVVEMG 1003
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVR------------------------LR 96
FQ + V L+ MY K +RKV + M VR R
Sbjct: 1004 FQWNLHVGNELMGMYGKIGRMDDARKVFERMAVRSCVSWNTMVSGYALNYDCHGASEMFR 1063
Query: 97 ---------SVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSG----C 143
++V+W S++S+H+R + E + + M + G+ +A V+S
Sbjct: 1064 MMGSAGLEPNLVTWTSLLSSHARCGQHVETMELFGRMRMRGIGATAEALAVVLSVSVDLA 1123
Query: 144 SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTII 203
+F +G +H V K G N + + NS++ +Y K G VN AR +F EI +IVSW +I
Sbjct: 1124 AFDEGKVIHGYVVK-GGFENYLFVKNSLICLYGKHGNVNAARILFLEIKTKNIVSWNALI 1182
Query: 204 GGYVNVGNVNEAFGLCNQMRRMS----VTPDLVVFLNLILG------------------- 240
Y ++G +EAF + Q+ + V P++V + +I G
Sbjct: 1183 SSYADLGWCDEAFAIFLQLEKTDEYPMVRPNVVSWSAVIGGFASKGQGEEALELFRRMQL 1242
Query: 241 ----------------CAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLEL 284
CA++ L L +H +++S + + N L++MYTK G +
Sbjct: 1243 AKVKANSVTIASVLSVCAELAALHLGREIHGHVVRSLMDGNILVGNGLINMYTKSGSFKE 1302
Query: 285 ARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAE 344
VF+ + K + W +M+ GY G A+ F +++K P+ T LSAC+
Sbjct: 1303 GNLVFEKIENKDLISWNTMVAGYGIHGLGENAIRTFDQMIKDGFEPDGVTFVAVLSACSH 1362
Query: 345 LGSLSKGKEIEEYIVLN-GLESNRQVQTSLIHMFSKCGRINKAKEVFERVP-DKDLAVWS 402
G +++G+E+ + ++ +E + ++ + + G + +A +V + +P + + VW
Sbjct: 1363 AGLVAEGRELFDKMIKEFRVEPQMEHYACMVDLLGRAGLLQEASKVVKSMPVEPNACVWG 1422
Query: 403 AMINGYAIH 411
A++N +H
Sbjct: 1423 ALLNSCRMH 1431
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/239 (28%), Positives = 124/239 (51%), Gaps = 14/239 (5%)
Query: 230 DLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVF 289
D++ F N +L Q L+ +HS ++ +G + L +VS+Y G + A+RVF
Sbjct: 870 DVLDFFNDLL--QQCSKSHLSQQIHSQIIVTGSHRSAFLAARVVSVYAGFGLVSDAQRVF 927
Query: 290 D-AVLE--KSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELG 346
+ + +E ++ LW S++ GY EA+ ++ R+ K V + T + ACA +G
Sbjct: 928 EVSPIECFSNLLLWNSILRANVAHGYCEEALEIYCRMRKLGVSADGFTFPLVIRACALMG 987
Query: 347 SLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMIN 406
S + + ++V G + N V L+ M+ K GR++ A++VFER+ + W+ M++
Sbjct: 988 SRKLCRSVHGHVVEMGFQWNLHVGNELMGMYGKIGRMDDARKVFERMAVRSCVSWNTMVS 1047
Query: 407 GYAI----HGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQ 461
GYA+ HG + ++M GL+P+ V +TS+LS+ + G + + F M+
Sbjct: 1048 GYALNYDCHGASE-----MFRMMGSAGLEPNLVTWTSLLSSHARCGQHVETMELFGRMR 1101
>gi|225448223|ref|XP_002266190.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33990
[Vitis vinifera]
Length = 707
Score = 325 bits (834), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 185/599 (30%), Positives = 327/599 (54%), Gaps = 19/599 (3%)
Query: 36 VLKACANINSIWDGKRVHSHVLKVGFQ-QDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVR 94
+L+ C ++ ++ K +HS + GF LI +YSK D S+R + D
Sbjct: 31 LLQCCTSLTTL---KLIHSSLSTRGFLLHTPHFLARLIILYSKLGDLHSARTLFDHRHHH 87
Query: 95 LRSVVS------WNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCSFRQG 148
N+++ A++ A + EAI + M +G+ ++ T+ V+ C+ G
Sbjct: 88 HHGHTQAPNSFLCNTMLRAYANAGRSYEAIDLYIYMQRMGVGVNNFTYPFVLKVCASELG 147
Query: 149 IS----MHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIG 204
+H V + G +++ + +++ MYAK G++ +A +FD + +V WT +I
Sbjct: 148 AVFGEVVHGQVVRTGF-GSDLFVEAALVDMYAKCGEIGDAHEVFDRMLIRDVVCWTAMIT 206
Query: 205 GYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNN 264
Y +A L +M+ D + +++ Q+G+ +A+S+H + +G+
Sbjct: 207 LYEQAERPLKALMLFRKMQEEGFLGDEITAISVASAVGQLGDGRMAISVHGYAVLNGFIG 266
Query: 265 EDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLL 324
+ + N +V MY KCG++E AR VFD + E++ W SM+ GY Q G P++A++LF ++
Sbjct: 267 DVSVGNSIVGMYAKCGNVERARLVFDRMEERNGISWNSMLSGYTQNGRPTDALSLFNQMQ 326
Query: 325 KTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRIN 384
+ PN T +SAC+ LGS G+++ +++ + ++ + ++ +++ M+ KCG ++
Sbjct: 327 ASECDPNPVTALIMVSACSYLGSKHLGRKLHNFVISSKMDIDTTLRNAIMDMYMKCGDLD 386
Query: 385 KAKEVFE--RVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILS 442
A E+F + ++D++ W+ +I+GY +HG G +AL LF +MQ VEG++P+ + +TSILS
Sbjct: 387 TAVEMFNNCELGERDVSSWNVLISGYGVHGHGKEALELFSRMQ-VEGVEPNDITFTSILS 445
Query: 443 ACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQA 502
ACSH+G++D+G F M + + P ++HY C+VD+LGRAG + A + I ++P
Sbjct: 446 ACSHAGLIDEGRKCFADM-TKLSVRPEMKHYACMVDMLGRAGFLNEAFRLIKKIPSRPSD 504
Query: 503 QVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLM 562
+VW LL AC H N ELGE AA NL L P TG Y+LM+N++ ++ WKE R M
Sbjct: 505 EVWGALLLACRIHGNTELGEIAANNLFQLEPEHTGYYVLMSNIYAASNKWKEVEMVRQNM 564
Query: 563 DDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKELHIKLLEAGYIAEADIV 621
R L K +S +E V F D+S ++ + ++ L I++ GY+ + V
Sbjct: 565 KSRGLKKPAAFSVIEFGTEVHGFHTADQSSPYYREVYRKVESLAIEMKMVGYVPDLSCV 623
Score = 226 bits (576), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 137/452 (30%), Positives = 236/452 (52%), Gaps = 19/452 (4%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
M+R N G E + Y M + GV N+FT+P VLK CA+ G+ VH V++ G
Sbjct: 103 MLRAYANAGRSYEAIDLYIYMQRMGVGVNNFTYPFVLKVCASELGAVFGEVVHGQVVRTG 162
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F D FV+ L+DMY+KC + + +V D M + R VV W ++I+ + +A +A+++
Sbjct: 163 FGSDLFVEAALVDMYAKCGEIGDAHEVFDRMLI--RDVVCWTAMITLYEQAERPLKALML 220
Query: 121 LKEMW---VLGLELSASTFVSVVSGC-SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
++M LG E++A + S V R IS+H G + ++ + NS++ MYA
Sbjct: 221 FRKMQEEGFLGDEITAISVASAVGQLGDGRMAISVHGYAVLNGFI-GDVSVGNSIVGMYA 279
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K G V AR +FD + E + +SW +++ GY G +A L NQM+ P+ V L
Sbjct: 280 KCGNVERARLVFDRMEERNGISWNSMLSGYTQNGRPTDALSLFNQMQASECDPNPVTALI 339
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFD--AVLE 294
++ C+ +G+ L +H+ ++ S + + L N ++ MY KCGDL+ A +F+ + E
Sbjct: 340 MVSACSYLGSKHLGRKLHNFVISSKMDIDTTLRNAIMDMYMKCGDLDTAVEMFNNCELGE 399
Query: 295 KSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEI 354
+ V W +I GY G+ EA+ LF R+ V PN+ T + LSAC+ G + +G++
Sbjct: 400 RDVSSWNVLISGYGVHGHGKEALELFSRMQVEGVEPNDITFTSILSACSHAGLIDEGRKC 459
Query: 355 EEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDL-AVWSAMINGYAIHG- 412
+ + + ++ M + G +N+A + +++P + VW A++ IHG
Sbjct: 460 FADMTKLSVRPEMKHYACMVDMLGRAGFLNEAFRLIKKIPSRPSDEVWGALLLACRIHGN 519
Query: 413 --MGDQALNLFYKMQHVEGLKPDAVVYTSILS 442
+G+ A N ++ L+P+ Y ++S
Sbjct: 520 TELGEIAANNLFQ------LEPEHTGYYVLMS 545
>gi|125547017|gb|EAY92839.1| hypothetical protein OsI_14639 [Oryza sativa Indica Group]
Length = 702
Score = 325 bits (834), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 196/618 (31%), Positives = 324/618 (52%), Gaps = 17/618 (2%)
Query: 21 MLQTGVHGNSFTFPLVLKACANI----NSIWDGKRVHSHVLKVGF--QQDAFVQTGLIDM 74
ML G SFT VL+A +++ ++ G+ H+ LK G F L+ M
Sbjct: 1 MLAGGHPLTSFTLVSVLRAVSHLPAAAAAVRLGREAHAFALKNGLLHGHQRFAFNALLSM 60
Query: 75 YSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSAS 134
Y++ ++++ VV+WN+++S ++ + DEA+ L +M LG+
Sbjct: 61 YARLGLVADAQRLFAGATPGRGDVVTWNTMVSVLVQSGMFDEAVQTLYDMVALGVRPDGV 120
Query: 135 TFVSVVSGCSFRQ----GISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDE 190
TF S + CS + G MH V K L +A++++ MYA +V +AR +FD
Sbjct: 121 TFASALPACSRLELLDVGREMHAYVIKDDELAANSFVASALVDMYATHEQVGKARQVFDM 180
Query: 191 IGET--SIVSWTTIIGGYVNVGNVNEAFGLCNQMR-RMSVTPDLVVFLNLILGCAQVGNL 247
+ ++ + W +I GY G EA L +M P +++ CA+
Sbjct: 181 VPDSGKQLGMWNAMICGYAQAGMDEEALRLFARMEAEAGFVPCETTMASVLPACARSEAF 240
Query: 248 FLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGY 307
++H ++K G + N L+ MY + G ++ARR+F V V W ++I G
Sbjct: 241 AGKEAVHGYVVKRGMAGNRFVQNALMDMYARLGKTDVARRIFAMVDLPDVVSWNTLITGC 300
Query: 308 AQLGYPSEAVNL---FKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLE 364
G+ ++A L ++L + V PN TL T L CA L + ++GKEI Y V + L+
Sbjct: 301 VVQGHVADAFQLAREMQQLEEGGVVPNAITLMTLLPGCAILAAPARGKEIHGYAVRHALD 360
Query: 365 SNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKM 424
++ V ++L+ M++KCG + ++ VF+R+P ++ W+ +I Y +HG+G +A LF +M
Sbjct: 361 TDVAVGSALVDMYAKCGCLALSRAVFDRLPRRNTITWNVLIMAYGMHGLGGEATVLFDRM 420
Query: 425 QHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAG 484
+P+ V + + L+ACSHSGMVD GL F +M+ + G+EP+ + C+VD+LGRAG
Sbjct: 421 TASGEARPNEVTFMAALAACSHSGMVDRGLQLFHAMERDHGVEPTPDILACVVDILGRAG 480
Query: 485 RFDLALKTIHEMPV-EVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMA 543
R D A + M E Q W+ +L AC H NV LGE A + LL L P +Y+L+
Sbjct: 481 RLDEAYAMVTSMEAGEQQVSAWSTMLGACRLHRNVHLGEIAGERLLELEPEEASHYVLLC 540
Query: 544 NLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLK 603
N++++AG W AA R M R + KEPG S +E+DG++ F+AG+ +H S ++ ++
Sbjct: 541 NIYSAAGQWTRAAEVRSRMRRRGVAKEPGCSWIEVDGAIHRFMAGESAHPASEEVHAHME 600
Query: 604 ELHIKLLEAGYIAEADIV 621
L +++ GY + V
Sbjct: 601 ALWGEMVARGYTPDTSCV 618
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 117/424 (27%), Positives = 215/424 (50%), Gaps = 14/424 (3%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
M+ +G F+E + T M+ GV + TF L AC+ + + G+ +H++V+K
Sbjct: 90 MVSVLVQSGMFDEAVQTLYDMVALGVRPDGVTFASALPACSRLELLDVGREMHAYVIKDD 149
Query: 61 -FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAIL 119
++FV + L+DMY+ +R+V D +P + + WN++I +++A +++EA+
Sbjct: 150 ELAANSFVASALVDMYATHEQVGKARQVFDMVPDSGKQLGMWNAMICGYAQAGMDEEALR 209
Query: 120 VLKEMWV-LGLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSM 174
+ M G +T SV+ C +F ++H V K G+ N + N++M M
Sbjct: 210 LFARMEAEAGFVPCETTMASVLPACARSEAFAGKEAVHGYVVKRGMAGNRF-VQNALMDM 268
Query: 175 YAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRM---SVTPDL 231
YA+ GK + AR IF + +VSW T+I G V G+V +AF L +M+++ V P+
Sbjct: 269 YARLGKTDVARRIFAMVDLPDVVSWNTLITGCVVQGHVADAFQLAREMQQLEEGGVVPNA 328
Query: 232 VVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDA 291
+ + L+ GCA + +H ++ + + + + LV MY KCG L L+R VFD
Sbjct: 329 ITLMTLLPGCAILAAPARGKEIHGYAVRHALDTDVAVGSALVDMYAKCGCLALSRAVFDR 388
Query: 292 VLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTS-VRPNEATLATTLSACAELGSLSK 350
+ ++ W +I Y G EA LF R+ + RPNE T L+AC+ G + +
Sbjct: 389 LPRRNTITWNVLIMAYGMHGLGGEATVLFDRMTASGEARPNEVTFMAALAACSHSGMVDR 448
Query: 351 GKEIEEYIVLN-GLESNRQVQTSLIHMFSKCGRINKAKEVFERVP--DKDLAVWSAMING 407
G ++ + + G+E + ++ + + GR+++A + + ++ ++ WS M+
Sbjct: 449 GLQLFHAMERDHGVEPTPDILACVVDILGRAGRLDEAYAMVTSMEAGEQQVSAWSTMLGA 508
Query: 408 YAIH 411
+H
Sbjct: 509 CRLH 512
>gi|449464496|ref|XP_004149965.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Cucumis sativus]
gi|449497665|ref|XP_004160467.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Cucumis sativus]
Length = 938
Score = 325 bits (834), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 186/623 (29%), Positives = 331/623 (53%), Gaps = 10/623 (1%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+I + N EE+ + M N T ++L C +++ + GK VH +K G
Sbjct: 232 IISANAQNTLHEESFRYFHWMRLVHEEINYTTLSILLSICGSVDYLKWGKGVHGLAVKYG 291
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+ + + L+ +YS + + MP R ++SWNS+++ + + A+ V
Sbjct: 292 LESNICLCNTLLSVYSDAGRSKDAELIFRRMPER--DLISWNSMLACYVQDGRCLCALKV 349
Query: 121 LKEMWVLGLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
EM + E++ TF S ++ C F G +H V LGL +E+ + N++++ Y
Sbjct: 350 FAEMLWMKKEINYVTFTSALAACLDPEFFTNGKILHGFVVVLGL-QDELIIGNTLITFYG 408
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTP-DLVVFL 235
K K+ EA+ +F + + V+W +IGG+ N +NEA MR S + D + +
Sbjct: 409 KCHKMAEAKKVFQRMPKLDKVTWNALIGGFANNAELNEAVAAFKLMREGSTSGVDYITIV 468
Query: 236 NLILGCAQVGNLF-LALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLE 294
N++ C +L + +H+ + +G++ + + + L++MY KCGDL + +FD ++
Sbjct: 469 NILGSCLTHEDLIKYGIPIHAHTVVTGFDLDQHVQSSLITMYAKCGDLHSSSYIFDQLVF 528
Query: 295 KSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEI 354
K+ +W ++I A+ G+ EA+ L R+ + ++ +T LS A+L L +G+++
Sbjct: 529 KTSSVWNAIIAANARYGFGEEALKLVVRMRSAGIEFDQFNFSTALSVAADLAMLEEGQQL 588
Query: 355 EEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMG 414
+ G E + + + + M+ KCG ++ A + + D+ W+ +I+ A HG
Sbjct: 589 HGSTIKLGFELDHFIINAAMDMYGKCGELDDALRILPQPTDRSRLSWNTLISISARHGQF 648
Query: 415 DQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYL 474
+A F+ M + G+KP+ V + +LSACSH G+VD+GL+++ SM S +GI+P IEH +
Sbjct: 649 HKAKETFHDMLKL-GVKPNHVSFVCLLSACSHGGLVDEGLAYYASMTSVYGIQPGIEHCV 707
Query: 475 CLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPG 534
C++DLLGR+GR A I EMP+ VW LL++C + N++LG AAK+LL L+P
Sbjct: 708 CMIDLLGRSGRLVEAEAFITEMPIPPNDLVWRSLLASCRIYRNLDLGRKAAKHLLELDPS 767
Query: 535 STGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHL 594
Y+L +N+F + G W++ RG M ++ K+P S V+ G++ +F GD++H
Sbjct: 768 DDSAYVLYSNVFATIGRWEDVEDVRGQMGAHKIQKKPAHSWVKWKGNISIFGMGDQTHPQ 827
Query: 595 SVDIRKTLKELHIKLLEAGYIAE 617
I L L + EAGY+ +
Sbjct: 828 MEQINGKLLGLMKIVGEAGYVPD 850
Score = 206 bits (523), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 151/567 (26%), Positives = 277/567 (48%), Gaps = 25/567 (4%)
Query: 6 TNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDA 65
++NGS +E ++TY M G+ N LV+ +C + I G ++ H LK G +
Sbjct: 136 SDNGSKKEVINTYKRMRHEGICCNENNIALVISSCGFLMDIILGHQLLGHALKFGLETKV 195
Query: 66 FVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMW 125
LI M+ C D + + +EM R +SWNSIISA+++ L++E+ M
Sbjct: 196 SAANSLIFMFGGCGDINEACSIFNEM--NERDTISWNSIISANAQNTLHEESFRYFHWMR 253
Query: 126 VLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKV 181
++ E++ +T ++S C + G +H K GL +N I L N+++S+Y+ G+
Sbjct: 254 LVHEEINYTTLSILLSICGSVDYLKWGKGVHGLAVKYGLESN-ICLCNTLLSVYSDAGRS 312
Query: 182 NEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGC 241
+A IF + E ++SW +++ YV G A + +M M + V F + + C
Sbjct: 313 KDAELIFRRMPERDLISWNSMLACYVQDGRCLCALKVFAEMLWMKKEINYVTFTSALAAC 372
Query: 242 AQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWT 301
+H ++ G +E + N L++ Y KC + A++VF + + W
Sbjct: 373 LDPEFFTNGKILHGFVVVLGLQDELIIGNTLITFYGKCHKMAEAKKVFQRMPKLDKVTWN 432
Query: 302 SMIGGYAQLGYPSEAVNLFKRLLKTSVRP-NEATLATTLSACAELGSLSK-GKEIEEYIV 359
++IGG+A +EAV FK + + S + T+ L +C L K G I + V
Sbjct: 433 ALIGGFANNAELNEAVAAFKLMREGSTSGVDYITIVNILGSCLTHEDLIKYGIPIHAHTV 492
Query: 360 LNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALN 419
+ G + ++ VQ+SLI M++KCG ++ + +F+++ K +VW+A+I A +G G++AL
Sbjct: 493 VTGFDLDQHVQSSLITMYAKCGDLHSSSYIFDQLVFKTSSVWNAIIAANARYGFGEEALK 552
Query: 420 LFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYL--CLV 477
L +M+ G++ D +++ LS + M+++G S G E ++H++ +
Sbjct: 553 LVVRMRSA-GIEFDQFNFSTALSVAADLAMLEEGQQLHGS-TIKLGFE--LDHFIINAAM 608
Query: 478 DLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTG 537
D+ G+ G D AL+ + + P + W L+S +H + ++L L G
Sbjct: 609 DMYGKCGELDDALRILPQ-PTDRSRLSWNTLISISARHGQFHKAKETFHDMLKL--GVKP 665
Query: 538 NYILMANLFTSAGMWKEAATARGLMDD 564
N++ L + A + GL+D+
Sbjct: 666 NHVSFVCLLS-------ACSHGGLVDE 685
Score = 175 bits (444), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 136/525 (25%), Positives = 247/525 (47%), Gaps = 16/525 (3%)
Query: 9 GSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIW--DGKRVHSHVLKVGFQQDAF 66
GS+ E + + + G+ + F ++ AC N +SI +G + H +K G D F
Sbjct: 37 GSYVEAVLFFRDICGIGIKPSGFMIASLVTAC-NKSSIMAKEGFQFHGFAIKCGLIYDVF 95
Query: 67 VQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWV 126
V T + Y+ +++K+ +EMP R +VVSW S++ ++S E I K M
Sbjct: 96 VGTSFVHFYASYGIVSNAQKMFNEMPDR--NVVSWTSLMVSYSDNGSKKEVINTYKRMRH 153
Query: 127 LGLELSASTFVSVVSGCSFRQGISMHCCVYKLGL---LNNEIPLANSVMSMYAKFGKVNE 183
G+ + + V+S C F I + + L L ++ ANS++ M+ G +NE
Sbjct: 154 EGICCNENNIALVISSCGFLMDIILGHQLLGHALKFGLETKVSAANSLIFMFGGCGDINE 213
Query: 184 ARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQ 243
A SIF+E+ E +SW +II E+F + MR + + L+ C
Sbjct: 214 ACSIFNEMNERDTISWNSIISANAQNTLHEESFRYFHWMRLVHEEINYTTLSILLSICGS 273
Query: 244 VGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSM 303
V L +H L +K G + L N L+S+Y+ G + A +F + E+ + W SM
Sbjct: 274 VDYLKWGKGVHGLAVKYGLESNICLCNTLLSVYSDAGRSKDAELIFRRMPERDLISWNSM 333
Query: 304 IGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGL 363
+ Y Q G A+ +F +L N T + L+AC + + GK + ++V+ GL
Sbjct: 334 LACYVQDGRCLCALKVFAEMLWMKKEINYVTFTSALAACLDPEFFTNGKILHGFVVVLGL 393
Query: 364 ESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYK 423
+ + +LI + KC ++ +AK+VF+R+P D W+A+I G+A + ++A+ F
Sbjct: 394 QDELIIGNTLITFYGKCHKMAEAKKVFQRMPKLDKVTWNALIGGFANNAELNEAVAAFKL 453
Query: 424 MQHVEGLKPDAVVYTSILSAC-SHSGMVDDGLSFF-KSMQSNFGIEPSIEHYLCLVDLLG 481
M+ D + +IL +C +H ++ G+ ++ + F ++ ++ L+ +
Sbjct: 454 MREGSTSGVDYITIVNILGSCLTHEDLIKYGIPIHAHTVVTGFDLDQHVQS--SLITMYA 511
Query: 482 RAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAK 526
+ G + I + V + VW +++A ++ GE A K
Sbjct: 512 KCGDLH-SSSYIFDQLVFKTSSVWNAIIAANARY---GFGEEALK 552
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 125/481 (25%), Positives = 221/481 (45%), Gaps = 14/481 (2%)
Query: 74 MYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSA 133
MYSK ++ V D M R + SWN ++S + R EA+L +++ +G++ S
Sbjct: 1 MYSKFGRINYAQLVFDRMSER--NEASWNHMMSGYVRVGSYVEAVLFFRDICGIGIKPSG 58
Query: 134 STFVSVVSGCS-----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIF 188
S+V+ C+ ++G H K GL+ ++ + S + YA +G V+ A+ +F
Sbjct: 59 FMIASLVTACNKSSIMAKEGFQFHGFAIKCGLI-YDVFVGTSFVHFYASYGIVSNAQKMF 117
Query: 189 DEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLF 248
+E+ + ++VSWT+++ Y + G+ E +MR + + +I C + ++
Sbjct: 118 NEMPDRNVVSWTSLMVSYSDNGSKKEVINTYKRMRHEGICCNENNIALVISSCGFLMDII 177
Query: 249 LALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYA 308
L + LK G + N L+ M+ CGD+ A +F+ + E+ W S+I A
Sbjct: 178 LGHQLLGHALKFGLETKVSAANSLIFMFGGCGDINEACSIFNEMNERDTISWNSIISANA 237
Query: 309 QLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQ 368
Q E+ F + N TL+ LS C + L GK + V GLESN
Sbjct: 238 QNTLHEESFRYFHWMRLVHEEINYTTLSILLSICGSVDYLKWGKGVHGLAVKYGLESNIC 297
Query: 369 VQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVE 428
+ +L+ ++S GR A+ +F R+P++DL W++M+ Y G AL +F +M ++
Sbjct: 298 LCNTLLSVYSDAGRSKDAELIFRRMPERDLISWNSMLACYVQDGRCLCALKVFAEMLWMK 357
Query: 429 GLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDL 488
+ + V +TS L+AC +G G++ + L+ G+ +
Sbjct: 358 K-EINYVTFTSALAACLDPEFFTNG-KILHGFVVVLGLQDELIIGNTLITFYGKCHKMAE 415
Query: 489 ALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTG-NYILMANLFT 547
A K MP ++ W L+ +N EL E A L ++G +YI + N+
Sbjct: 416 AKKVFQRMP-KLDKVTWNALIGGFA--NNAELNEAVAAFKLMREGSTSGVDYITIVNILG 472
Query: 548 S 548
S
Sbjct: 473 S 473
>gi|357166812|ref|XP_003580863.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15130-like [Brachypodium distachyon]
Length = 707
Score = 325 bits (834), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 192/591 (32%), Positives = 315/591 (53%), Gaps = 20/591 (3%)
Query: 36 VLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRL 95
+L+A A ++I G ++H +LK+GF D + LIDMY+KC + + +V MP R
Sbjct: 10 MLRASAASSAIHGGAQLHGALLKLGFGSDTMLGNNLIDMYAKCGELRMAGEVFGGMPER- 68
Query: 96 RSVVSWNSIISAHSRACLNDEAILVLKEMWVLG------LELSASTFVSVVSGCSFRQGI 149
+VVSW +++ R E + +L M L LSAS V G G+
Sbjct: 69 -NVVSWTALMVGFLRHGDARECLRLLGAMRSLSDVAPNEFTLSASLKACGVVG-DMAAGV 126
Query: 150 SMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNV 209
+H + G + + +ANS++ +Y+K G++ +AR +FD ++V+W +I GY +
Sbjct: 127 WIHGACVRAGFEGHHV-VANSLVLLYSKGGRIGDARRVFDGTVFRNLVTWNAMISGYAHA 185
Query: 210 GNVNEAFGLCNQMRRMSV-----TPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNN 264
G+ ++ + +M++ PD F +L+ C +G +H+ ++ G +
Sbjct: 186 GHGRDSLLVFREMQQRRQEEEDHQPDEFTFASLLKACGSLGAAREGAQVHAAMVIRGVST 245
Query: 265 EDP--LDNLLVSMYTKCGDL-ELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFK 321
L L+ MY KC L +A +VF+ + +K+ WT++I G+AQ G EA+ LF
Sbjct: 246 ASNAILAGALLDMYVKCRCLLPMAMQVFNRLEQKNAIQWTTVIVGHAQEGQVKEAMELFG 305
Query: 322 RLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCG 381
R + VR + L++ + A+ + +G+++ Y V + V SLI M+ KCG
Sbjct: 306 RFWSSGVRADGHVLSSVVGVFADFALVEQGRQVHCYTVKTPAGLDVSVANSLIDMYHKCG 365
Query: 382 RINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSIL 441
++A F VP +++ W+AMING HG G +A+++F +M+ EG++PD V Y ++L
Sbjct: 366 LTDEAARRFREVPARNVVSWTAMINGLGKHGHGQEAIHMFEEMR-AEGVEPDEVAYLALL 424
Query: 442 SACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQ 501
SACSHSG+V++ +F +++ + + P EHY C+VDLLGRAG A + MP+
Sbjct: 425 SACSHSGLVEECRRYFSAIRHDRRLRPRAEHYACMVDLLGRAGELSEAKDLVATMPMAPT 484
Query: 502 AQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGL 561
VW LLSAC H NV +G A + LL ++ + NY++++N+F AG W+E RG
Sbjct: 485 VGVWQTLLSACRVHKNVTVGREAGETLLAIDGDNPVNYVMLSNIFAEAGDWRECQRVRGA 544
Query: 562 MDDRRLTKEPGWSQVEIDGSVQVFV-AGDRSHHLSVDIRKTLKELHIKLLE 611
M R L K+ G S VE+ F GD SH + DI L+++ + E
Sbjct: 545 MRRRGLRKQGGCSWVEVGKEAHFFYGGGDDSHPRAADICCVLRDVERTMRE 595
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 108/425 (25%), Positives = 199/425 (46%), Gaps = 28/425 (6%)
Query: 7 NNGSFEETLSTYSSMLQ-TGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDA 65
+G E L +M + V N FT LKAC + + G +H ++ GF+
Sbjct: 82 RHGDARECLRLLGAMRSLSDVAPNEFTLSASLKACGVVGDMAAGVWIHGACVRAGFEGHH 141
Query: 66 FVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMW 125
V L+ +YSK +R+V D R++V+WN++IS ++ A +++LV +EM
Sbjct: 142 VVANSLVLLYSKGGRIGDARRVFD--GTVFRNLVTWNAMISGYAHAGHGRDSLLVFREMQ 199
Query: 126 VLGLELSAS-----TFVSVVSGC----SFRQGISMHCCVYKLGL--LNNEIPLANSVMSM 174
E TF S++ C + R+G +H + G+ +N I LA +++ M
Sbjct: 200 QRRQEEEDHQPDEFTFASLLKACGSLGAAREGAQVHAAMVIRGVSTASNAI-LAGALLDM 258
Query: 175 YAKFG-KVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVV 233
Y K + A +F+ + + + + WTT+I G+ G V EA L + V D V
Sbjct: 259 YVKCRCLLPMAMQVFNRLEQKNAIQWTTVIVGHAQEGQVKEAMELFGRFWSSGVRADGHV 318
Query: 234 FLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVL 293
+++ A + +H +K+ + + N L+ MY KCG + A R F V
Sbjct: 319 LSSVVGVFADFALVEQGRQVHCYTVKTPAGLDVSVANSLIDMYHKCGLTDEAARRFREVP 378
Query: 294 EKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKE 353
++V WT+MI G + G+ EA+++F+ + V P+E LSAC+ G + +E
Sbjct: 379 ARNVVSWTAMINGLGKHGHGQEAIHMFEEMRAEGVEPDEVAYLALLSACSHSGLV---EE 435
Query: 354 IEEYIVLNGLESNRQVQ------TSLIHMFSKCGRINKAKEVFERVP-DKDLAVWSAMIN 406
Y + + +R+++ ++ + + G +++AK++ +P + VW +++
Sbjct: 436 CRRY--FSAIRHDRRLRPRAEHYACMVDLLGRAGELSEAKDLVATMPMAPTVGVWQTLLS 493
Query: 407 GYAIH 411
+H
Sbjct: 494 ACRVH 498
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 94/209 (44%), Gaps = 9/209 (4%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+I G +E + + +GV + V+ A+ + G++VH + +K
Sbjct: 287 VIVGHAQEGQVKEAMELFGRFWSSGVRADGHVLSSVVGVFADFALVEQGRQVHCYTVKTP 346
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
D V LIDMY KC + + E+P R+VVSW ++I+ + EAI +
Sbjct: 347 AGLDVSVANSLIDMYHKCGLTDEAARRFREVPA--RNVVSWTAMINGLGKHGHGQEAIHM 404
Query: 121 LKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGLLNNE--IPLAN---SVMSMY 175
+EM G+E +++++S CS G+ C Y + ++ P A ++ +
Sbjct: 405 FEEMRAEGVEPDEVAYLALLSACSH-SGLVEECRRYFSAIRHDRRLRPRAEHYACMVDLL 463
Query: 176 AKFGKVNEARSIFDEIGETSIVS-WTTII 203
+ G+++EA+ + + V W T++
Sbjct: 464 GRAGELSEAKDLVATMPMAPTVGVWQTLL 492
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 63/118 (53%), Gaps = 3/118 (2%)
Query: 335 LATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVP 394
+A L A A ++ G ++ ++ G S+ + +LI M++KCG + A EVF +P
Sbjct: 7 IADMLRASAASSAIHGGAQLHGALLKLGFGSDTMLGNNLIDMYAKCGELRMAGEVFGGMP 66
Query: 395 DKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDD 452
++++ W+A++ G+ HG + L L M+ + + P+ ++ L AC G+V D
Sbjct: 67 ERNVVSWTALMVGFLRHGDARECLRLLGAMRSLSDVAPNEFTLSASLKAC---GVVGD 121
>gi|449488311|ref|XP_004157997.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Cucumis sativus]
Length = 785
Score = 325 bits (834), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 190/567 (33%), Positives = 312/567 (55%), Gaps = 29/567 (5%)
Query: 62 QQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVL 121
+++ GL+ Y +R+V D MP R +VVSW +++ + + + EA +
Sbjct: 157 ERNTISWNGLVSGYINNGMINEAREVFDRMPER--NVVSWTAMVRGYVKEGMISEAETLF 214
Query: 122 KEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKV 181
+M E + ++ ++ G I C ++ + + ++ +++ Y + G++
Sbjct: 215 WQM----PEKNVVSWTVMLGGLLQEGRIDEACRLFDM-MPEKDVVTRTNMIGGYCQVGRL 269
Query: 182 NEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEA---FGLCNQMRRMSVTPDLVVFLNLI 238
EAR +FDE+ ++VSWTT+I GYV V+ A F + + +S T L + N
Sbjct: 270 VEARMLFDEMPRRNVVSWTTMITGYVQNQQVDIARKLFEVMPEKNEVSWTAMLKGYTN-- 327
Query: 239 LGCAQV---GNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEK 295
C ++ LF A+ + S++ N ++ + + G++ AR+VFD + EK
Sbjct: 328 --CGRLDEASELFNAMPIKSVVAC----------NAMILCFGQNGEVPKARQVFDQMREK 375
Query: 296 SVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIE 355
W++MI Y + G +A+ LF+ + + +RPN +L + LS CA L +L G+EI
Sbjct: 376 DEGTWSAMIKVYERKGLELDALELFRMMQREGIRPNFPSLISVLSVCAGLANLDHGREIH 435
Query: 356 EYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGD 415
+V + + + V + L+ M+ KCG + KAK+VF+R KD+ +W+++I GYA HG+G
Sbjct: 436 AQLVRSQFDLDVYVASVLLSMYIKCGNLAKAKQVFDRFAVKDVVMWNSIITGYAQHGLGV 495
Query: 416 QALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLC 475
+AL +F+ M H G+ PD V + +LSACS++G V GL F SM++ + +E IEHY C
Sbjct: 496 EALRVFHDM-HFSGIMPDDVTFVGVLSACSYTGNVKKGLEIFNSMETKYQVEQKIEHYAC 554
Query: 476 LVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGS 535
+VDLLGRAG+ + A+ I +MP+E A +W LL AC H ++L E AAK LL L P +
Sbjct: 555 MVDLLGRAGKLNEAMDLIEKMPMEADAIIWGALLGACRTHMKLDLAEVAAKKLLVLEPKN 614
Query: 536 TGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLS 595
G +IL++N++ S G W + A R M DRR++K PG S + ++ V F GD S H
Sbjct: 615 AGPFILLSNIYASQGRWDDVAELRRNMRDRRVSKYPGCSWIVVEKKVHKFTGGDSSGHPE 674
Query: 596 -VDIRKTLKELHIKLLEAGYIAEADIV 621
+I + L+ L L EAGY + V
Sbjct: 675 HSEINRILEWLSGLLREAGYYPDQSFV 701
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 92/366 (25%), Positives = 165/366 (45%), Gaps = 74/366 (20%)
Query: 162 NNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIG----------------- 204
+N I NS+++ Y++ G++ +AR +FDE+ + +I+SW +I+
Sbjct: 95 SNFIISRNSLITRYSRLGQIEKARVVFDEMRDKNIISWNSIVAGYFQNKRPQEAQNMFDK 154
Query: 205 --------------GYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVG----- 245
GY+N G +NEA + ++M +V V + ++ G + G
Sbjct: 155 MSERNTISWNGLVSGYINNGMINEAREVFDRMPERNV----VSWTAMVRGYVKEGMISEA 210
Query: 246 -NLFLALSMHSL---------LLKSGYNNED-------PLDNL-----LVSMYTKCGDLE 283
LF + ++ LL+ G +E P ++ ++ Y + G L
Sbjct: 211 ETLFWQMPEKNVVSWTVMLGGLLQEGRIDEACRLFDMMPEKDVVTRTNMIGGYCQVGRLV 270
Query: 284 LARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACA 343
AR +FD + ++V WT+MI GY Q ++ V++ ++L + NE + L
Sbjct: 271 EARMLFDEMPRRNVVSWTTMITGYVQ----NQQVDIARKLFEVMPEKNEVSWTAMLKGYT 326
Query: 344 ELGSLSKGKEIEEYIVLNGLESNRQVQ-TSLIHMFSKCGRINKAKEVFERVPDKDLAVWS 402
G L + E+ N + V ++I F + G + KA++VF+++ +KD WS
Sbjct: 327 NCGRLDEASEL-----FNAMPIKSVVACNAMILCFGQNGEVPKARQVFDQMREKDEGTWS 381
Query: 403 AMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSM-Q 461
AMI Y G+ AL LF MQ EG++P+ S+LS C+ +D G + +
Sbjct: 382 AMIKVYERKGLELDALELFRMMQR-EGIRPNFPSLISVLSVCAGLANLDHGREIHAQLVR 440
Query: 462 SNFGIE 467
S F ++
Sbjct: 441 SQFDLD 446
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 105/210 (50%), Gaps = 7/210 (3%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI+ G + L + M + G+ N + VL CA + ++ G+ +H+ +++
Sbjct: 383 MIKVYERKGLELDALELFRMMQREGIRPNFPSLISVLSVCAGLANLDHGREIHAQLVRSQ 442
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F D +V + L+ MY KC + +++V D V + VV WNSII+ +++ L EA+ V
Sbjct: 443 FDLDVYVASVLLSMYIKCGNLAKAKQVFDRFAV--KDVVMWNSIITGYAQHGLGVEALRV 500
Query: 121 LKEMWVLGLELSASTFVSVVSGCSF----RQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
+M G+ TFV V+S CS+ ++G+ + + + +I ++ +
Sbjct: 501 FHDMHFSGIMPDDVTFVGVLSACSYTGNVKKGLEIFNSMETKYQVEQKIEHYACMVDLLG 560
Query: 177 KFGKVNEARSIFDEIG-ETSIVSWTTIIGG 205
+ GK+NEA + +++ E + W ++G
Sbjct: 561 RAGKLNEAMDLIEKMPMEADAIIWGALLGA 590
>gi|15222917|ref|NP_175445.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213175|sp|Q9SX45.1|PPR75_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g50270
gi|5734776|gb|AAD50041.1|AC007980_6 Hypothetical protein [Arabidopsis thaliana]
gi|332194410|gb|AEE32531.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 596
Score = 325 bits (833), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 186/557 (33%), Positives = 313/557 (56%), Gaps = 15/557 (2%)
Query: 62 QQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRA-CLNDE-AIL 119
++D F+ L + + F +R++L ++ + S+ W+S+I S LN + L
Sbjct: 33 RRDLFLSRLLRRCCTAATQFRYARRLLCQL--QTLSIQLWDSLIGHFSGGITLNRRLSFL 90
Query: 120 VLKEMWVLGLELSASTFVSVVSGC-SFRQG--ISMHCCVYKLGLLNNEIPLANSVMSMYA 176
+ M G+ S TF ++ R H + K GL +++ + NS++S Y+
Sbjct: 91 AYRHMRRNGVIPSRHTFPPLLKAVFKLRDSNPFQFHAHIVKFGL-DSDPFVRNSLISGYS 149
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
G + A +FD + +V+WT +I G+V G+ +EA +M++ V + + ++
Sbjct: 150 SSGLFDFASRLFDGAEDKDVVTWTAMIDGFVRNGSASEAMVYFVEMKKTGVAANEMTVVS 209
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDP-LDNLLVSMYTKCGDLELARRVFDAVLEK 295
++ +V ++ S+H L L++G D + + LV MY KC + A++VFD + +
Sbjct: 210 VLKAAGKVEDVRFGRSVHGLYLETGRVKCDVFIGSSLVDMYGKCSCYDDAQKVFDEMPSR 269
Query: 296 SVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIE 355
+V WT++I GY Q + + +F+ +LK+ V PNE TL++ LSACA +G+L +G+ +
Sbjct: 270 NVVTWTALIAGYVQSRCFDKGMLVFEEMLKSDVAPNEKTLSSVLSACAHVGALHRGRRVH 329
Query: 356 EYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGD 415
Y++ N +E N T+LI ++ KCG + +A VFER+ +K++ W+AMING+A HG
Sbjct: 330 CYMIKNSIEINTTAGTTLIDLYVKCGCLEEAILVFERLHEKNVYTWTAMINGFAAHGYAR 389
Query: 416 QALNLFYKM--QHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHY 473
A +LFY M HV P+ V + ++LSAC+H G+V++G F SM+ F +EP +HY
Sbjct: 390 DAFDLFYTMLSSHVS---PNEVTFMAVLSACAHGGLVEEGRRLFLSMKGRFNMEPKADHY 446
Query: 474 LCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNP 533
C+VDL GR G + A I MP+E VW L +C+ H + ELG+YAA ++ L P
Sbjct: 447 ACMVDLFGRKGLLEEAKALIERMPMEPTNVVWGALFGSCLLHKDYELGKYAASRVIKLQP 506
Query: 534 GSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHH 593
+G Y L+ANL++ + W E A R M D+++ K PG+S +E+ G + F+A D
Sbjct: 507 SHSGRYTLLANLYSESQNWDEVARVRKQMKDQQVVKSPGFSWIEVKGKLCEFIAFDDKKP 566
Query: 594 L-SVDIRKTLKELHIKL 609
L S D+ KTL + +++
Sbjct: 567 LESDDLYKTLDTVGVQM 583
Score = 189 bits (480), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 121/419 (28%), Positives = 208/419 (49%), Gaps = 16/419 (3%)
Query: 18 YSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSK 77
Y M + GV + TFP +LKA + + + H+H++K G D FV+ LI YS
Sbjct: 92 YRHMRRNGVIPSRHTFPPLLKAVFKLRDS-NPFQFHAHIVKFGLDSDPFVRNSLISGYSS 150
Query: 78 CSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFV 137
F + ++ D + VV+W ++I R EA++ EM G+ + T V
Sbjct: 151 SGLFDFASRLFD--GAEDKDVVTWTAMIDGFVRNGSASEAMVYFVEMKKTGVAANEMTVV 208
Query: 138 SVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGE 193
SV+ R G S+H + G + ++ + +S++ MY K ++A+ +FDE+
Sbjct: 209 SVLKAAGKVEDVRFGRSVHGLYLETGRVKCDVFIGSSLVDMYGKCSCYDDAQKVFDEMPS 268
Query: 194 TSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSM 253
++V+WT +I GYV ++ + +M + V P+ +++ CA VG L +
Sbjct: 269 RNVVTWTALIAGYVQSRCFDKGMLVFEEMLKSDVAPNEKTLSSVLSACAHVGALHRGRRV 328
Query: 254 HSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYP 313
H ++K+ L+ +Y KCG LE A VF+ + EK+V+ WT+MI G+A GY
Sbjct: 329 HCYMIKNSIEINTTAGTTLIDLYVKCGCLEEAILVFERLHEKNVYTWTAMINGFAAHGYA 388
Query: 314 SEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNG---LESNRQVQ 370
+A +LF +L + V PNE T LSACA G + +G+ + ++ + G +E
Sbjct: 389 RDAFDLFYTMLSSHVSPNEVTFMAVLSACAHGGLVEEGRRL--FLSMKGRFNMEPKADHY 446
Query: 371 TSLIHMFSKCGRINKAKEVFERVP-DKDLAVWSAMINGYAIHG---MGDQALNLFYKMQ 425
++ +F + G + +AK + ER+P + VW A+ +H +G A + K+Q
Sbjct: 447 ACMVDLFGRKGLLEEAKALIERMPMEPTNVVWGALFGSCLLHKDYELGKYAASRVIKLQ 505
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 94/319 (29%), Positives = 163/319 (51%), Gaps = 24/319 (7%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI NGS E + + M +TGV N T VLKA + + G+ VH L+ G
Sbjct: 175 MIDGFVRNGSASEAMVYFVEMKKTGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLYLETG 234
Query: 61 -FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAIL 119
+ D F+ + L+DMY KCS + ++KV DEMP R+VV+W ++I+ + ++ D+ +L
Sbjct: 235 RVKCDVFIGSSLVDMYGKCSCYDDAQKVFDEMPS--RNVVTWTALIAGYVQSRCFDKGML 292
Query: 120 VLKEMWVLGLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMY 175
V +EM + + T SV+S C + +G +HC + K + N +++ +Y
Sbjct: 293 VFEEMLKSDVAPNEKTLSSVLSACAHVGALHRGRRVHCYMIKNSIEINTTA-GTTLIDLY 351
Query: 176 AKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFL 235
K G + EA +F+ + E ++ +WT +I G+ G +AF L M V+P+ V F+
Sbjct: 352 VKCGCLEEAILVFERLHEKNVYTWTAMINGFAAHGYARDAFDLFYTMLSSHVSPNEVTFM 411
Query: 236 NLILGCAQVG------NLFLALSMHSLLLKSGYNNEDPLDNL--LVSMYTKCGDLELARR 287
++ CA G LFL+ +K +N E D+ +V ++ + G LE A+
Sbjct: 412 AVLSACAHGGLVEEGRRLFLS-------MKGRFNMEPKADHYACMVDLFGRKGLLEEAKA 464
Query: 288 VFDAV-LEKSVFLWTSMIG 305
+ + + +E + +W ++ G
Sbjct: 465 LIERMPMEPTNVVWGALFG 483
>gi|125532437|gb|EAY79002.1| hypothetical protein OsI_34111 [Oryza sativa Indica Group]
Length = 847
Score = 325 bits (833), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 191/592 (32%), Positives = 321/592 (54%), Gaps = 8/592 (1%)
Query: 36 VLKACANINSIWDGKRVHSH-VLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVR 94
+L++C + G+ +H+ VL F+ LI MYS C+D S+ ++ MP
Sbjct: 176 LLQSCGRAGDLRRGRLLHARLVLSGAAAASTFLANHLITMYSHCADLASALRLFAAMP-- 233
Query: 95 LRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELS--ASTFVSVVSGCSFRQGISMH 152
R+ VSW +++S S+ ++ +A+ M G+ + A + + + +
Sbjct: 234 RRNAVSWTTLVSGLSQNLMHADALAAFAAMRRAGVAPTRFALSSAARAAAALGAPLRARS 293
Query: 153 CCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNV 212
C + E+ +A+++ MY+K G ++EA +FD++ + V+WT +I GY G++
Sbjct: 294 CTASASVGFDTELFVASNLADMYSKCGLLSEACRVFDQMPQKDAVAWTAMIDGYAKNGSL 353
Query: 213 NEAFGLCNQMRRMS-VTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNL 271
A M+R V D VF +++ + + +L+ S+H + K+G+ E + N
Sbjct: 354 EAAVLSFRDMKREGLVGADQHVFCSVLSASGGLKDGWLSKSIHCCVTKAGFELEVAVRNA 413
Query: 272 LVSMYTKCGDLELARRVFDAVLEK-SVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRP 330
L+ MY K D+E A RV +V TSMI GY + EA+ ++ L + V P
Sbjct: 414 LIDMYAKSMDVESASRVLKIDPGGWNVVSGTSMIDGYIETDCVEEALVIYVELRRQGVEP 473
Query: 331 NEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVF 390
NE T ++ + CA L +G ++ ++ L + V ++L+ M+ KCG I+ + ++F
Sbjct: 474 NEFTFSSMIKGCAMQALLEQGAQLHAQVIKTDLIRDSFVGSTLVDMYGKCGLISLSMQLF 533
Query: 391 ERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMV 450
+ + W+A+IN +A HG G +A+ F +M + G++P+ + + S+L+ACSH+G+V
Sbjct: 534 NEIEYRTDIAWNAVINVFAQHGHGREAIQAFDRMIY-SGIRPNHIAFVSLLTACSHAGLV 592
Query: 451 DDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLS 510
D+GL +F SM+ GIEP EHY C++D GRAGR D A K I EMP++ A W LL
Sbjct: 593 DEGLKYFYSMKEAHGIEPKEEHYSCIIDTYGRAGRLDEAYKFISEMPIKPNAYGWCSLLG 652
Query: 511 ACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKE 570
AC + ELGE AA+NL+ L PG+TG ++ ++ ++ S G W++ R LM D R+ K
Sbjct: 653 ACRMRGSKELGEVAAQNLMKLEPGNTGIHVSLSGIYASLGQWEDVKAVRKLMRDSRIKKL 712
Query: 571 PGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKELHIKLLEAGYIAEADIVP 622
PG+S V+ + VF + D SH DI + L+EL ++ E GYI + +P
Sbjct: 713 PGFSWVDSNKKTHVFGSEDWSHPQQKDIYEKLEELTTRIKEEGYIPDTSFLP 764
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 88/333 (26%), Positives = 165/333 (49%), Gaps = 15/333 (4%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHG-NSFTFPLVLKACANINSIWDGKRVHSHVLKV 59
MI NGS E + ++ M + G+ G + F VL A + W K +H V K
Sbjct: 343 MIDGYAKNGSLEAAVLSFRDMKREGLVGADQHVFCSVLSASGGLKDGWLSKSIHCCVTKA 402
Query: 60 GFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAIL 119
GF+ + V+ LIDMY+K D S+ +VL P +VVS S+I + +EA++
Sbjct: 403 GFELEVAVRNALIDMYAKSMDVESASRVLKIDPGGW-NVVSGTSMIDGYIETDCVEEALV 461
Query: 120 VLKEMWVLGLELSASTFVSVVSGCSFR----QGISMHCCVYKLGLLNNEIPLANSVMSMY 175
+ E+ G+E + TF S++ GC+ + QG +H V K L+ + + ++++ MY
Sbjct: 462 IYVELRRQGVEPNEFTFSSMIKGCAMQALLEQGAQLHAQVIKTDLIRDSF-VGSTLVDMY 520
Query: 176 AKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFL 235
K G ++ + +F+EI + ++W +I + G+ EA ++M + P+ + F+
Sbjct: 521 GKCGLISLSMQLFNEIEYRTDIAWNAVINVFAQHGHGREAIQAFDRMIYSGIRPNHIAFV 580
Query: 236 NLILGCAQVGNLFLALS-MHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARR-VFDAVL 293
+L+ C+ G + L +S+ G ++ + ++ Y + G L+ A + + + +
Sbjct: 581 SLLTACSHAGLVDEGLKYFYSMKEAHGIEPKEEHYSCIIDTYGRAGRLDEAYKFISEMPI 640
Query: 294 EKSVFLWTSMIG-----GYAQLGYPSEAVNLFK 321
+ + + W S++G G +LG + A NL K
Sbjct: 641 KPNAYGWCSLLGACRMRGSKELGEVA-AQNLMK 672
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 135/586 (23%), Positives = 247/586 (42%), Gaps = 74/586 (12%)
Query: 36 VLKACANINSIWDGKRVHSH-VLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVR 94
+L++C + G+ +H+ VL F+ LI MYS C+D S+ ++ MP
Sbjct: 26 LLQSCGRAGDLRRGRLLHARLVLSGAAAASTFLANHLITMYSHCADLASALRLFAAMP-- 83
Query: 95 LRSVVSWNSIISA----------------------------------------HSRA--- 111
R+ VSW +++S H+ A
Sbjct: 84 RRNAVSWTTLVSGLSQNLMHADALAAFAAMRRAGVAPTRLIYETKFHNTLGPKHTLAASH 143
Query: 112 CLNDEAILVL---KEMWVLGLELSAST--FVSVVSGC----SFRQGISMHCCVYKLGLLN 162
C + ++V + +W +A+T S++ C R+G +H + G
Sbjct: 144 CHSGPTLMVKYWGQRLWRPPAPAAATTVHLASLLQSCGRAGDLRRGRLLHARLVLSGAAA 203
Query: 163 NEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQM 222
LAN +++MY+ + A +F + + VSWTT++ G +A M
Sbjct: 204 ASTFLANHLITMYSHCADLASALRLFAAMPRRNAVSWTTLVSGLSQNLMHADALAAFAAM 263
Query: 223 RRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDL 282
RR V P + A +G A S + G++ E + + L MY+KCG L
Sbjct: 264 RRAGVAPTRFALSSAARAAAALGAPLRARSC-TASASVGFDTELFVASNLADMYSKCGLL 322
Query: 283 ELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTS-VRPNEATLATTLSA 341
A RVFD + +K WT+MI GYA+ G AV F+ + + V ++ + LSA
Sbjct: 323 SEACRVFDQMPQKDAVAWTAMIDGYAKNGSLEAAVLSFRDMKREGLVGADQHVFCSVLSA 382
Query: 342 CAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDK-DLAV 400
L K I + G E V+ +LI M++K + A V + P ++
Sbjct: 383 SGGLKDGWLSKSIHCCVTKAGFELEVAVRNALIDMYAKSMDVESASRVLKIDPGGWNVVS 442
Query: 401 WSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSM 460
++MI+GY ++AL ++ +++ +G++P+ ++S++ C+ +++ G +
Sbjct: 443 GTSMIDGYIETDCVEEALVIYVELRR-QGVEPNEFTFSSMIKGCAMQALLEQGAQLHAQV 501
Query: 461 QSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQV-WAPLLSACMKH-HNV 518
I S LVD+ G+ G L+++ +E +E + + W +++ +H H
Sbjct: 502 IKTDLIRDSFVGST-LVDMYGKCGLISLSMQLFNE--IEYRTDIAWNAVINVFAQHGHGR 558
Query: 519 ELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDD 564
E + + + + G N+I +L T A + GL+D+
Sbjct: 559 EAIQAFDRMIYS---GIRPNHIAFVSLLT-------ACSHAGLVDE 594
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 77/338 (22%), Positives = 134/338 (39%), Gaps = 54/338 (15%)
Query: 232 VVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDP-LDNLLVSMYTKCGDLELARRVFD 290
V +L+ C + G+L +H+ L+ SG L N L++MY+ C DL A R+F
Sbjct: 21 VHLASLLQSCGRAGDLRRGRLLHARLVLSGAAAASTFLANHLITMYSHCADLASALRLFA 80
Query: 291 AVLEKSVFLWTSMIGGYAQ---------------------------------LGY----- 312
A+ ++ WT+++ G +Q LG
Sbjct: 81 AMPRRNAVSWTTLVSGLSQNLMHADALAAFAAMRRAGVAPTRLIYETKFHNTLGPKHTLA 140
Query: 313 -------PSEAVNLFKRLLKTSVRPNEAT---LATTLSACAELGSLSKGKEIEEYIVLNG 362
P+ V + + L P AT LA+ L +C G L +G+ + +VL+G
Sbjct: 141 ASHCHSGPTLMVKYWGQRLWRPPAPAAATTVHLASLLQSCGRAGDLRRGRLLHARLVLSG 200
Query: 363 LESNRQ-VQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLF 421
+ + LI M+S C + A +F +P ++ W+ +++G + + M AL F
Sbjct: 201 AAAASTFLANHLITMYSHCADLASALRLFAAMPRRNAVSWTTLVSGLSQNLMHADALAAF 260
Query: 422 YKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLG 481
M+ G+ P +S A + G S S F E + L D+
Sbjct: 261 AAMRRA-GVAPTRFALSSAARAAAALGAPLRARSCTASASVGFDTELFVASN--LADMYS 317
Query: 482 RAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVE 519
+ G A + +MP + A W ++ K+ ++E
Sbjct: 318 KCGLLSEACRVFDQMP-QKDAVAWTAMIDGYAKNGSLE 354
>gi|413918945|gb|AFW58877.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 768
Score = 325 bits (833), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 195/626 (31%), Positives = 326/626 (52%), Gaps = 15/626 (2%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+I N + + +SSML+ G + F ++ACA + + G++VH+ +K
Sbjct: 117 VIAAHAQNSRCADAMGLFSSMLRLGTAPDEFALGSAVRACAELGDLGLGRQVHAQAIKSD 176
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
VQ L+ MYSK + + +R + + SW SII+ ++ +A+ +
Sbjct: 177 NGGHLIVQNALVTMYSKSGSVGDGFALFER--IRDKDLFSWGSIIAGLAQQGREMDALHI 234
Query: 121 LKEMWVLGLELSAS-TFVSVVSGCS-----FRQGISMH--CCVYKLGLLNNEIPLANSVM 172
+EM G+ F SV CS G +H C YKL + S+
Sbjct: 235 FREMIAEGMHHPNEFHFGSVFRACSVVINSLEYGEQIHGLCVKYKL---DRNSYAGCSLG 291
Query: 173 SMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLV 232
MYA+ K++ A +F I +VSW ++I + G ++EA L ++MR S+ PD +
Sbjct: 292 DMYARCNKLDSAMKVFYRIESPDLVSWNSLINAFSADGLLSEAMVLFSEMRYSSLKPDGI 351
Query: 233 VFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAV 292
+ L+ C L S+HS L+K G + + N L+SMYT+C D A VF
Sbjct: 352 TVMALLCACVGCDALRQGRSIHSYLVKLGLGGDVMVCNSLISMYTRCLDFPSAMDVFHET 411
Query: 293 LEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGK 352
++ V W S++ Q + + LF+ L + + +L LSA AELG K
Sbjct: 412 NDRDVVTWNSILTACVQHRHMEDVFKLFRLLHSSMPSLDRISLNNVLSASAELGYFEMAK 471
Query: 353 EIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERV-PDKDLAVWSAMINGYAIH 411
++ Y GL S+ + +LI ++KCG ++ A ++FE + +D+ WS++I GYA
Sbjct: 472 QVHAYAFKVGLVSDAILSNALIDTYAKCGSLDDANKLFEIMGTGRDVFSWSSLIVGYAQF 531
Query: 412 GMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIE 471
G +AL+LF +M+++ G+KP+ V + +L ACS G+VD+G ++ M+ +GI P+ E
Sbjct: 532 GYAKEALDLFARMRNL-GVKPNHVTFVGVLIACSRVGLVDEGCYYYSIMEPEYGIVPTKE 590
Query: 472 HYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTL 531
H C++DLL RAGR A K + +MP E +W LL+A H++VE+G+ AA+ +L +
Sbjct: 591 HCSCVIDLLARAGRLSEAAKFVDQMPFEPDIIMWNTLLAASRTHNDVEMGKRAAEGVLNI 650
Query: 532 NPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRS 591
+P + Y+L+ N++ S+G W E A + M + K PG S +++ G ++VF+ DRS
Sbjct: 651 DPSHSAAYVLLCNIYASSGNWNEFARLKKDMRSSGVQKSPGKSWIKLKGELKVFIVEDRS 710
Query: 592 HHLSVDIRKTLKELHIKLLEAGYIAE 617
H S ++ L + ++++AGYI E
Sbjct: 711 HPESDEMYTMLDLIGFEMVKAGYIPE 736
Score = 168 bits (426), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 108/383 (28%), Positives = 191/383 (49%), Gaps = 11/383 (2%)
Query: 144 SFRQG--ISMHCCVYKLG---LLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVS 198
SF QG + H G L N I L+N +++MY + + AR +FD + + + VS
Sbjct: 55 SFPQGRLVHRHLLASSAGAAYLARNTI-LSNHLITMYGRCAAPDSARMVFDGMLDRNPVS 113
Query: 199 WTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLL 258
W +I + +A GL + M R+ PD + + CA++G+L L +H+ +
Sbjct: 114 WAAVIAAHAQNSRCADAMGLFSSMLRLGTAPDEFALGSAVRACAELGDLGLGRQVHAQAI 173
Query: 259 KSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVN 318
KS + N LV+MY+K G + +F+ + +K +F W S+I G AQ G +A++
Sbjct: 174 KSDNGGHLIVQNALVTMYSKSGSVGDGFALFERIRDKDLFSWGSIIAGLAQQGREMDALH 233
Query: 319 LFKRLLKTSV-RPNEATLATTLSACA-ELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHM 376
+F+ ++ + PNE + AC+ + SL G++I V L+ N SL M
Sbjct: 234 IFREMIAEGMHHPNEFHFGSVFRACSVVINSLEYGEQIHGLCVKYKLDRNSYAGCSLGDM 293
Query: 377 FSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVV 436
+++C +++ A +VF R+ DL W+++IN ++ G+ +A+ LF +M++ LKPD +
Sbjct: 294 YARCNKLDSAMKVFYRIESPDLVSWNSLINAFSADGLLSEAMVLFSEMRY-SSLKPDGIT 352
Query: 437 YTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEM 496
++L AC + G S S G+ + L+ + R F A+ HE
Sbjct: 353 VMALLCACVGCDALRQGRS-IHSYLVKLGLGGDVMVCNSLISMYTRCLDFPSAMDVFHET 411
Query: 497 PVEVQAQVWAPLLSACMKHHNVE 519
+ W +L+AC++H ++E
Sbjct: 412 N-DRDVVTWNSILTACVQHRHME 433
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 108/419 (25%), Positives = 196/419 (46%), Gaps = 13/419 (3%)
Query: 40 CANINSIWDGKRVHSHVLKVG-----FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVR 94
C+ + S G+ VH H+L ++ + LI MY +C+ S+R V D M R
Sbjct: 50 CSRLRSFPQGRLVHRHLLASSAGAAYLARNTILSNHLITMYGRCAAPDSARMVFDGMLDR 109
Query: 95 LRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCSFRQGISMHCC 154
+ VSW ++I+AH++ +A+ + M LG S V C+ + +
Sbjct: 110 --NPVSWAAVIAAHAQNSRCADAMGLFSSMLRLGTAPDEFALGSAVRACAELGDLGLGRQ 167
Query: 155 VYKLGLLNN---EIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGN 211
V+ + ++ + + N++++MY+K G V + ++F+ I + + SW +II G G
Sbjct: 168 VHAQAIKSDNGGHLIVQNALVTMYSKSGSVGDGFALFERIRDKDLFSWGSIIAGLAQQGR 227
Query: 212 VNEAFGLCNQMRRMSV-TPDLVVFLNLILGCAQVGN-LFLALSMHSLLLKSGYNNEDPLD 269
+A + +M + P+ F ++ C+ V N L +H L +K +
Sbjct: 228 EMDALHIFREMIAEGMHHPNEFHFGSVFRACSVVINSLEYGEQIHGLCVKYKLDRNSYAG 287
Query: 270 NLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVR 329
L MY +C L+ A +VF + + W S+I ++ G SEA+ LF + +S++
Sbjct: 288 CSLGDMYARCNKLDSAMKVFYRIESPDLVSWNSLINAFSADGLLSEAMVLFSEMRYSSLK 347
Query: 330 PNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEV 389
P+ T+ L AC +L +G+ I Y+V GL + V SLI M+++C A +V
Sbjct: 348 PDGITVMALLCACVGCDALRQGRSIHSYLVKLGLGGDVMVCNSLISMYTRCLDFPSAMDV 407
Query: 390 FERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSG 448
F D+D+ W++++ H + LF ++ H D + ++LSA + G
Sbjct: 408 FHETNDRDVVTWNSILTACVQHRHMEDVFKLF-RLLHSSMPSLDRISLNNVLSASAELG 465
>gi|357167843|ref|XP_003581359.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like, partial [Brachypodium distachyon]
Length = 745
Score = 325 bits (833), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 187/529 (35%), Positives = 279/529 (52%), Gaps = 7/529 (1%)
Query: 92 PVRLRSVVSWNSIISAHSRACLNDEAILVLKEMW-----VLGLELSASTFVSVVSGCSFR 146
P RS S+N +I + RA ++A+ + EM A+T S C
Sbjct: 129 PHPPRSARSYNILIRSFLRAGHPEDALHLFVEMLDDTAVSPDQHTVANTVKSCSRMCDLS 188
Query: 147 QGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGY 206
G + +K G + ++ L NS++ MYA G V A +F + +++W +I GY
Sbjct: 189 VGRGVQAYAFKRGFMVDQFVL-NSLIHMYASCGDVVAAHVLFHTVQVKGVIAWNAMIAGY 247
Query: 207 VNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNED 266
V G+ E + M + D V L++ C ++G+ L + + G
Sbjct: 248 VKNGDWKEVVEMFKGMLEVRAPFDEVTLLSVATACGRLGDANLGQWIAEYAEEKGMLRSR 307
Query: 267 PLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKT 326
L LV MY KCG+L+ ARR+FD + + V W++MI GY Q EA+ +F + T
Sbjct: 308 NLATALVDMYAKCGELDKARRLFDRMHSRDVVAWSAMISGYTQSDRCREALAIFNEMQGT 367
Query: 327 SVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKA 386
V PN+ T+ + LSACA LG+L GK + YI L + T+L+ ++KCG I A
Sbjct: 368 EVNPNDVTMVSVLSACAVLGALETGKWVHSYIRRKDLPLTVILGTALVDFYAKCGCIKDA 427
Query: 387 KEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSH 446
+ FE +P ++ W+A+I G A +G +AL LF M ++P V + +L ACSH
Sbjct: 428 VKAFESMPVRNTWTWTALIKGMASNGRSREALELFSSMLEA-NIEPTDVTFIGVLLACSH 486
Query: 447 SGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWA 506
+V++G F SM ++GI P IEHY C+VDLLGRAG D A + I MP+E A VW
Sbjct: 487 GCLVEEGRRHFTSMTQDYGICPRIEHYGCMVDLLGRAGLIDEAYQFIRNMPIEPNAVVWR 546
Query: 507 PLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRR 566
LLSAC H NVE+GE A K ++ L+P +GNYIL++N + S G WK AA R M ++
Sbjct: 547 ALLSACTVHKNVEIGEEALKQIVPLDPCHSGNYILLSNTYASVGQWKNAAMVRKEMKEKG 606
Query: 567 LTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKELHIKLLEAGYI 615
+ K PG S +E++G++ F A D H +I + + E+ + GYI
Sbjct: 607 VEKIPGCSLIELEGTIFEFFAEDSEHPQLTEIYEKVHEMIENIKMVGYI 655
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 123/467 (26%), Positives = 221/467 (47%), Gaps = 46/467 (9%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQ-TGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKV 59
+IR+ G E+ L + ML T V + T +K+C+ + + G+ V ++ K
Sbjct: 141 LIRSFLRAGHPEDALHLFVEMLDDTAVSPDQHTVANTVKSCSRMCDLSVGRGVQAYAFKR 200
Query: 60 GFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAIL 119
GF D FV LI MY+ C D V++ + V+++ V++WN++I+ + + E +
Sbjct: 201 GFMVDQFVLNSLIHMYASCGDVVAAHVLFHT--VQVKGVIAWNAMIAGYVKNGDWKEVVE 258
Query: 120 VLKEMWVLGLELSASTFVSVVSGC------SFRQGISMHCCVYKLGLLNNEIPLANSVMS 173
+ K M + T +SV + C + Q I+ + + G+L + LA +++
Sbjct: 259 MFKGMLEVRAPFDEVTLLSVATACGRLGDANLGQWIAEY--AEEKGMLRSR-NLATALVD 315
Query: 174 MYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVV 233
MYAK G++++AR +FD + +V+W+ +I GY EA + N+M+ V P+ V
Sbjct: 316 MYAKCGELDKARRLFDRMHSRDVVAWSAMISGYTQSDRCREALAIFNEMQGTEVNPNDVT 375
Query: 234 FLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVL 293
++++ CA +G L +HS + + L LV Y KCG ++ A + F+++
Sbjct: 376 MVSVLSACAVLGALETGKWVHSYIRRKDLPLTVILGTALVDFYAKCGCIKDAVKAFESMP 435
Query: 294 EKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKE 353
++ + WT++I G A G EA+ LF +L+ ++ P + T L AC S G
Sbjct: 436 VRNTWTWTALIKGMASNGRSREALELFSSMLEANIEPTDVTFIGVLLAC------SHGCL 489
Query: 354 IEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGM 413
+EE R+ TS+ + C RI + M++ G+
Sbjct: 490 VEE---------GRRHFTSMTQDYGICPRIEH---------------YGCMVDLLGRAGL 525
Query: 414 GDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSM 460
D+A M ++P+AVV+ ++LSAC+ V+ G K +
Sbjct: 526 IDEAYQFIRNMP----IEPNAVVWRALLSACTVHKNVEIGEEALKQI 568
>gi|225430410|ref|XP_002282982.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070
[Vitis vinifera]
Length = 599
Score = 325 bits (833), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 186/589 (31%), Positives = 329/589 (55%), Gaps = 19/589 (3%)
Query: 36 VLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMY--SKCSDFVSSRKVLDEMPV 93
+++ C NI + K++H+ + F+ T +I+ + C D+ + + P
Sbjct: 12 LIETCTNIQQL---KQIHAKSIISSLSYTQFIITKIINSFLSHACLDYATQVFNQTQEP- 67
Query: 94 RLRSVVSWNSIISAHSRACLNDEAILVLKEMW----VLGLELSAS-TFVSVVSGCSFRQG 148
+N++I A+S + AI + +M +LG + + F + S + +G
Sbjct: 68 ---DGFIYNAMIRAYSSSQTPCVAISIYNKMRACQNILGDKYTYPFVFKACASQFAVEKG 124
Query: 149 ISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVN 208
+H + ++G + L +S+++ Y G++ A+ +FDE +V W +I GY
Sbjct: 125 KEVHGVIVRIGYELDGF-LQSSLLNFYMVCGEIGNAQQVFDEFDAKDVVFWNALITGYAR 183
Query: 209 VGNVNEAFGLCNQMRRMS-VTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNED- 266
G V ++FG+ +M + V P+ + LI+ C + NL L ++H ++K E
Sbjct: 184 QGMVLDSFGVFKEMVEVKEVRPNEGTMMGLIVACIESKNLKLGRAIHGYMMKDMVLREGV 243
Query: 267 PLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKT 326
L+ L+++Y KCG L+ AR++FD + EK+ +W S+I GY Q+G +E + L + + +
Sbjct: 244 KLEAALINLYVKCGYLDGARKLFDEIPEKNTVVWNSLICGYCQIGSLNEVIELLREMHLS 303
Query: 327 SVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKA 386
+++P+ T++ LSACA++G+ + G + + G+ + + T+LI M++KCG I A
Sbjct: 304 NLKPDRFTVSGVLSACAQMGAFNLGNWVHRFAEKKGI-WDVFIGTALIDMYAKCGFIGAA 362
Query: 387 KEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSH 446
++VF+++ ++++A W+A+++GYA HG + A+ LF +M+ G +PD++ + ++L AC+H
Sbjct: 363 RKVFDQMNERNVATWNAILSGYASHGQAESAIELFSEMRE-SGARPDSITFLAVLHACAH 421
Query: 447 SGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWA 506
SG+V++G +F M + I P +EHY C+VDLLGRAG A + I M VE VW
Sbjct: 422 SGLVENGKQYFDLMLQYYKIPPRVEHYGCMVDLLGRAGLLQEARELIKMMVVEPNVVVWG 481
Query: 507 PLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRR 566
LLSAC H N+E+GE+AA +++ LN G+Y+++ANL+ SA + R +M ++
Sbjct: 482 ALLSACSIHGNIEIGEWAAHHMIKLNAMDGGSYVILANLYASAQRFNRVKAVREMMVEKG 541
Query: 567 LTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKELHIKLLEAGYI 615
+ K G S +EI V FV D+ H S +I L EL KL AGY+
Sbjct: 542 ICKSHGCSMIEIGDVVHEFVVADKMHPRSEEIYSVLDELSKKLKMAGYV 590
Score = 204 bits (518), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 123/441 (27%), Positives = 239/441 (54%), Gaps = 16/441 (3%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQ-TGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKV 59
MIR +++ + +S Y+ M + G+ +T+P V KACA+ ++ GK VH ++++
Sbjct: 75 MIRAYSSSQTPCVAISIYNKMRACQNILGDKYTYPFVFKACASQFAVEKGKEVHGVIVRI 134
Query: 60 GFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAIL 119
G++ D F+Q+ L++ Y C + ++++V DE + VV WN++I+ ++R + ++
Sbjct: 135 GYELDGFLQSSLLNFYMVCGEIGNAQQVFDEFDA--KDVVFWNALITGYARQGMVLDSFG 192
Query: 120 VLKEM-WVLGLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSM 174
V KEM V + + T + ++ C + + G ++H + K +L + L +++++
Sbjct: 193 VFKEMVEVKEVRPNEGTMMGLIVACIESKNLKLGRAIHGYMMKDMVLREGVKLEAALINL 252
Query: 175 YAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVF 234
Y K G ++ AR +FDEI E + V W ++I GY +G++NE L +M ++ PD
Sbjct: 253 YVKCGYLDGARKLFDEIPEKNTVVWNSLICGYCQIGSLNEVIELLREMHLSNLKPDRFTV 312
Query: 235 LNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLE 294
++ CAQ+G L +H K G + + L+ MY KCG + AR+VFD + E
Sbjct: 313 SGVLSACAQMGAFNLGNWVHRFAEKKGIWDV-FIGTALIDMYAKCGFIGAARKVFDQMNE 371
Query: 295 KSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEI 354
++V W +++ GYA G A+ LF + ++ RP+ T L ACA G + GK+
Sbjct: 372 RNVATWNAILSGYASHGQAESAIELFSEMRESGARPDSITFLAVLHACAHSGLVENGKQY 431
Query: 355 EEYIVLNGLESNRQVQ--TSLIHMFSKCGRINKAKEVFE-RVPDKDLAVWSAMINGYAIH 411
+ ++L + +V+ ++ + + G + +A+E+ + V + ++ VW A+++ +IH
Sbjct: 432 FD-LMLQYYKIPPRVEHYGCMVDLLGRAGLLQEARELIKMMVVEPNVVVWGALLSACSIH 490
Query: 412 G---MGDQALNLFYKMQHVEG 429
G +G+ A + K+ ++G
Sbjct: 491 GNIEIGEWAAHHMIKLNAMDG 511
>gi|224091072|ref|XP_002309169.1| predicted protein [Populus trichocarpa]
gi|222855145|gb|EEE92692.1| predicted protein [Populus trichocarpa]
Length = 619
Score = 325 bits (833), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 180/509 (35%), Positives = 278/509 (54%), Gaps = 40/509 (7%)
Query: 151 MHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVG 210
+H + +LGL + + L N V+ FG N + IF + E +I + T+I G V
Sbjct: 29 VHAALLRLGL-DEDSYLLNKVLRFSFNFGNTNYSHRIFHQTKEPNIFLFNTMIHGLVLND 87
Query: 211 NVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDN 270
+ E+ + + MR+ ++PD F L+ CA++ + L + +H L++K+G ++ ++
Sbjct: 88 SFQESIEIYHSMRKEGLSPDSFTFPFLLKACARLLDSKLGIKLHGLVVKAGCESDAFVNT 147
Query: 271 LLVSMYTKCG-----------------------------------DLELARR---VFDAV 292
LVS+Y KCG +++ RR VFD +
Sbjct: 148 SLVSLYGKCGFIDNAFKVFDDIPEKNVAAWTAIISGYIGVGKCREAIDMFRRACSVFDGM 207
Query: 293 LEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGK 352
LEK + W+SMI GYA G P EA++LF ++L RP+ + L ACA LG+L G
Sbjct: 208 LEKDIVSWSSMIQGYASNGLPKEALDLFFKMLNEGFRPDCYAMVGVLCACARLGALELGN 267
Query: 353 EIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHG 412
+ N N + T+LI M++KCGR++ A EVF + KD+ VW+A I+G A+ G
Sbjct: 268 WASNLMDRNEFLGNPVLGTALIDMYAKCGRMDSAWEVFRGMRKKDIVVWNAAISGLAMSG 327
Query: 413 MGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEH 472
A LF +M+ G++PD + +L AC+H+G+VD+G +F SM+ F + P IEH
Sbjct: 328 HVKAAFGLFGQMEK-SGIEPDGNTFVGLLCACTHAGLVDEGRQYFNSMERVFTLTPEIEH 386
Query: 473 YLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLN 532
Y C+VDLLGRAG D A + + MP+E A VW LL C H + +L E K L+ L
Sbjct: 387 YGCMVDLLGRAGFLDEAHQLVKSMPMEANAIVWGALLGGCRLHRDTQLVEGVLKQLIALE 446
Query: 533 PGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSH 592
P ++GNY+L++N+++++ W++AA R +M +R + K PG+S +E+DG V F+ GD SH
Sbjct: 447 PSNSGNYVLLSNIYSASHKWEDAAKIRSIMSERGIKKVPGYSWIEVDGVVHEFLVGDTSH 506
Query: 593 HLSVDIRKTLKELHIKLLEAGYIAEADIV 621
LS I L EL L +GY+ D V
Sbjct: 507 PLSEKIYAKLGELVKDLKASGYVPTTDYV 535
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 91/359 (25%), Positives = 157/359 (43%), Gaps = 65/359 (18%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI N SF+E++ Y SM + G+ +SFTFP +LKACA + G ++H V+K G
Sbjct: 79 MIHGLVLNDSFQESIEIYHSMRKEGLSPDSFTFPFLLKACARLLDSKLGIKLHGLVVKAG 138
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVR-------------------------- 94
+ DAFV T L+ +Y KC ++ KV D++P +
Sbjct: 139 CESDAFVNTSLVSLYGKCGFIDNAFKVFDDIPEKNVAAWTAIISGYIGVGKCREAIDMFR 198
Query: 95 ----------LRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCS 144
+ +VSW+S+I ++ L EA+ + +M G V V+ C+
Sbjct: 199 RACSVFDGMLEKDIVSWSSMIQGYASNGLPKEALDLFFKMLNEGFRPDCYAMVGVLCACA 258
Query: 145 FRQGISMHCCVYKL----GLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWT 200
+ + L L N + L +++ MYAK G+++ A +F + + IV W
Sbjct: 259 RLGALELGNWASNLMDRNEFLGNPV-LGTALIDMYAKCGRMDSAWEVFRGMRKKDIVVWN 317
Query: 201 TIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKS 260
I G G+V AFGL QM + + PD F+ L+ C G L+
Sbjct: 318 AAISGLAMSGHVKAAFGLFGQMEKSGIEPDGNTFVGLLCACTHAG-----------LVDE 366
Query: 261 GYNNEDPLDNL------------LVSMYTKCGDLELARRVFDAV-LEKSVFLWTSMIGG 306
G + ++ + +V + + G L+ A ++ ++ +E + +W +++GG
Sbjct: 367 GRQYFNSMERVFTLTPEIEHYGCMVDLLGRAGFLDEAHQLVKSMPMEANAIVWGALLGG 425
Score = 123 bits (308), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 96/421 (22%), Positives = 187/421 (44%), Gaps = 63/421 (14%)
Query: 43 INSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWN 102
NS+ K VH+ +L++G +D+++ ++ + S ++ + + ++ +N
Sbjct: 20 FNSLKHLKHVHAALLRLGLDEDSYLLNKVLRFSFNFGNTNYSHRIFHQ--TKEPNIFLFN 77
Query: 103 SIISAHSRACLND---EAILVLKEMWVLGLELSASTFVSVVSGCSF----RQGISMHCCV 155
++I LND E+I + M GL + TF ++ C+ + GI +H V
Sbjct: 78 TMIHG---LVLNDSFQESIEIYHSMRKEGLSPDSFTFPFLLKACARLLDSKLGIKLHGLV 134
Query: 156 YKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEA 215
K G ++ + S++S+Y K G ++ A +FD+I E ++ +WT II GY+ VG EA
Sbjct: 135 VKAGCESDAF-VNTSLVSLYGKCGFIDNAFKVFDDIPEKNVAAWTAIISGYIGVGKCREA 193
Query: 216 FGL----CN----------------------------------QMRRMSVTPDLVVFLNL 237
+ C+ +M PD + +
Sbjct: 194 IDMFRRACSVFDGMLEKDIVSWSSMIQGYASNGLPKEALDLFFKMLNEGFRPDCYAMVGV 253
Query: 238 ILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSV 297
+ CA++G L L +L+ ++ + L L+ MY KCG ++ A VF + +K +
Sbjct: 254 LCACARLGALELGNWASNLMDRNEFLGNPVLGTALIDMYAKCGRMDSAWEVFRGMRKKDI 313
Query: 298 FLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEY 357
+W + I G A G+ A LF ++ K+ + P+ T L AC G + +G++
Sbjct: 314 VVWNAAISGLAMSGHVKAAFGLFGQMEKSGIEPDGNTFVGLLCACTHAGLVDEGRQ---- 369
Query: 358 IVLNGLESNRQVQTSLIH------MFSKCGRINKAKEVFERVP-DKDLAVWSAMINGYAI 410
N +E + + H + + G +++A ++ + +P + + VW A++ G +
Sbjct: 370 -YFNSMERVFTLTPEIEHYGCMVDLLGRAGFLDEAHQLVKSMPMEANAIVWGALLGGCRL 428
Query: 411 H 411
H
Sbjct: 429 H 429
>gi|225425668|ref|XP_002269694.1| PREDICTED: pentatricopeptide repeat-containing protein At2g02980
[Vitis vinifera]
gi|296086362|emb|CBI31951.3| unnamed protein product [Vitis vinifera]
Length = 595
Score = 325 bits (833), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 170/459 (37%), Positives = 264/459 (57%), Gaps = 8/459 (1%)
Query: 170 SVMSMYAKFGKVN-------EARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQM 222
SV++ + F +N A +FD+I + IV + T+ GY AF L Q+
Sbjct: 53 SVLTKFINFCSLNPTTTSMQHAHHLFDQIPQPDIVLFNTMARGYARTDTPLRAFTLFTQI 112
Query: 223 RRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDL 282
+ PD F +L+ CA L +H L +K G + + L++MYT C ++
Sbjct: 113 LFSGLFPDDYTFPSLLKACASCKALEEGRQLHCLAIKLGLSENVYVCPTLINMYTACNEM 172
Query: 283 ELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSAC 342
+ ARRVFD + E V + +MI GYA+ P+EA++LF+ L +++P + T+ + LS+C
Sbjct: 173 DCARRVFDKIWEPCVVTYNAMITGYARGSRPNEALSLFRELQARNLKPTDVTMLSVLSSC 232
Query: 343 AELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWS 402
A LG+L GK + EY+ NG +V T+LI M++KCG ++ A VFE + +D WS
Sbjct: 233 ALLGALDLGKWMHEYVKKNGFNRFVKVDTALIDMYAKCGSLDDAVCVFENMAVRDTQAWS 292
Query: 403 AMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQS 462
AMI YAIHG G +A++LF +M+ G +PD + + +L ACSH+G+V++G +F M+
Sbjct: 293 AMIMAYAIHGHGLKAVSLFKEMRKA-GTEPDEITFLGLLYACSHTGLVEEGFEYFYGMRD 351
Query: 463 NFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGE 522
+G+ P I+HY C+VDLLGRAGR + A + I +P+ +W LLSAC H NVELG+
Sbjct: 352 KYGVIPGIKHYGCMVDLLGRAGRLEEAYEFIVGLPIRPTPILWRTLLSACGSHGNVELGK 411
Query: 523 YAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSV 582
+ + L+ G+YI+++NL AG W++ R LM++R + K PG S VE++ V
Sbjct: 412 RVIEQIFELDDSHGGDYIILSNLCARAGRWEDVNYVRKLMNERGVVKIPGCSSVEVNNVV 471
Query: 583 QVFVAGDRSHHLSVDIRKTLKELHIKLLEAGYIAEADIV 621
F +GD H +S + + L EL +L GY+ +V
Sbjct: 472 HEFFSGDGVHSVSTKLHQALDELVKELKLVGYVPNTSLV 510
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 111/452 (24%), Positives = 220/452 (48%), Gaps = 33/452 (7%)
Query: 32 TFPL-VLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYS---KCSDFVSSRKV 87
T PL +L C ++ + K++ + +K D V T I+ S + + +
Sbjct: 21 THPLSLLPKCTSLREL---KQLQAFAIKTHLHSDLSVLTKFINFCSLNPTTTSMQHAHHL 77
Query: 88 LDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCS--- 144
D++P +V +N++ ++R A + ++ GL TF S++ C+
Sbjct: 78 FDQIPQP--DIVLFNTMARGYARTDTPLRAFTLFTQILFSGLFPDDYTFPSLLKACASCK 135
Query: 145 -FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTII 203
+G +HC KLGL N + + ++++MY +++ AR +FD+I E +V++ +I
Sbjct: 136 ALEEGRQLHCLAIKLGLSEN-VYVCPTLINMYTACNEMDCARRVFDKIWEPCVVTYNAMI 194
Query: 204 GGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYN 263
GY NEA L +++ ++ P V L+++ CA +G L L MH + K+G+N
Sbjct: 195 TGYARGSRPNEALSLFRELQARNLKPTDVTMLSVLSSCALLGALDLGKWMHEYVKKNGFN 254
Query: 264 NEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRL 323
+D L+ MY KCG L+ A VF+ + + W++MI YA G+ +AV+LFK +
Sbjct: 255 RFVKVDTALIDMYAKCGSLDDAVCVFENMAVRDTQAWSAMIMAYAIHGHGLKAVSLFKEM 314
Query: 324 LKTSVRPNEATLATTLSACAELGSLSKGKEI-----EEYIVLNGLESNRQVQTSLIHMFS 378
K P+E T L AC+ G + +G E ++Y V+ G++ ++ +
Sbjct: 315 RKAGTEPDEITFLGLLYACSHTGLVEEGFEYFYGMRDKYGVIPGIKH----YGCMVDLLG 370
Query: 379 KCGRINKAKEVFERVPDKDLAV-WSAMINGYAIHG---MGDQALNLFYKMQHVEGLKPDA 434
+ GR+ +A E +P + + W +++ HG +G + + +++ G D
Sbjct: 371 RAGRLEEAYEFIVGLPIRPTPILWRTLLSACGSHGNVELGKRVIEQIFELDDSHG--GDY 428
Query: 435 VVYTSILSACSHSGMVDDGLSFFKSMQSNFGI 466
++ +++ C+ +G +D +++ + + + G+
Sbjct: 429 IILSNL---CARAGRWED-VNYVRKLMNERGV 456
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 88/362 (24%), Positives = 173/362 (47%), Gaps = 40/362 (11%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
M R + + ++ +L +G+ + +TFP +LKACA+ ++ +G+++H +K+G
Sbjct: 92 MARGYARTDTPLRAFTLFTQILFSGLFPDDYTFPSLLKACASCKALEEGRQLHCLAIKLG 151
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
++ +V LI+MY+ C++ +R+V D+ + VV++N++I+ ++R +EA+ +
Sbjct: 152 LSENVYVCPTLINMYTACNEMDCARRVFDK--IWEPCVVTYNAMITGYARGSRPNEALSL 209
Query: 121 LKEMWVLGLELSASTFVSVVSGCSFRQGIS----MHCCVYKLGLLNNEIPLANSVMSMYA 176
+E+ L+ + T +SV+S C+ + MH V K G N + + +++ MYA
Sbjct: 210 FRELQARNLKPTDVTMLSVLSSCALLGALDLGKWMHEYVKKNG-FNRFVKVDTALIDMYA 268
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K G +++A +F+ + +W+ +I Y G+ +A L +MR+ PD + FL
Sbjct: 269 KCGSLDDAVCVFENMAVRDTQAWSAMIMAYAIHGHGLKAVSLFKEMRKAGTEPDEITFLG 328
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
L+ C+ G L++ G+ M K G + +
Sbjct: 329 LLYACSHTG-----------LVEEGF-------EYFYGMRDKYGVIPGIKH--------- 361
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEE 356
+ M+ + G EA ++ ++ +RP T LSAC G++ GK + E
Sbjct: 362 ---YGCMVDLLGRAGRLEEA---YEFIVGLPIRPTPILWRTLLSACGSHGNVELGKRVIE 415
Query: 357 YI 358
I
Sbjct: 416 QI 417
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 110/254 (43%), Gaps = 16/254 (6%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI E LS + + + T VL +CA + ++ GK +H +V K G
Sbjct: 193 MITGYARGSRPNEALSLFRELQARNLKPTDVTMLSVLSSCALLGALDLGKWMHEYVKKNG 252
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F + V T LIDMY+KC + V + M V R +W+++I A++ +A+ +
Sbjct: 253 FNRFVKVDTALIDMYAKCGSLDDAVCVFENMAV--RDTQAWSAMIMAYAIHGHGLKAVSL 310
Query: 121 LKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGLLNNE-----IPLANSVMSMY 175
KEM G E TF+ ++ CS G+ Y G+ + I ++ +
Sbjct: 311 FKEMRKAGTEPDEITFLGLLYACS-HTGLVEEGFEYFYGMRDKYGVIPGIKHYGCMVDLL 369
Query: 176 AKFGKVNEARSIFD--EIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRM--SVTPDL 231
+ G++ EA I T I+ W T++ + GNV + Q+ + S D
Sbjct: 370 GRAGRLEEAYEFIVGLPIRPTPIL-WRTLLSACGSHGNVELGKRVIEQIFELDDSHGGDY 428
Query: 232 VVFLNLILGCAQVG 245
++ NL CA+ G
Sbjct: 429 IILSNL---CARAG 439
>gi|147771783|emb|CAN60259.1| hypothetical protein VITISV_007741 [Vitis vinifera]
Length = 602
Score = 325 bits (833), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 183/546 (33%), Positives = 294/546 (53%), Gaps = 39/546 (7%)
Query: 97 SVVSWNSIISAHSRACL--NDEAILVLKEMWVLGLELSASTFV----SVVSGCSFRQGIS 150
+V WN++I L D +L + GL + TF+ ++VSG ++G
Sbjct: 53 NVFVWNTMIRKQVENGLITRDPPLLYYMQGLRAGLRPNGHTFMYLLKALVSGQEVKEGEE 112
Query: 151 MHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVG 210
+H V + G +E ++ +++ Y G V + R +FDE+ + +V WT II YV V
Sbjct: 113 VHASVVRTGFACSEF-VSGALLGFYVACGLVGKGRQVFDEMRQPGLVLWTLIIRAYVCVT 171
Query: 211 NVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDN 270
+A L MR + +TPD+V ++ C +G+L +A +MH + KSG + + +
Sbjct: 172 FPEKALELFRTMREVGLTPDMVAVSTVVSACGLLGDLGVAKAMHCFIEKSGIEVDAFVSS 231
Query: 271 LLVSMYTKCG-------------------------------DLELARRVFDAVLEKSVFL 299
L+S Y +CG +LEL +++F ++ ++ V
Sbjct: 232 TLISTYGECGSLDYAYRFFQETPMKNIVVWNTMIHQSVEHNNLELGKQLFQSMPDRDVVS 291
Query: 300 WTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIV 359
W SMIGG+A++G EA+ F + + V PN TL +TLSACA G+L G I Y+
Sbjct: 292 WNSMIGGFARIGQYQEALTWFHEMEFSGVSPNALTLLSTLSACASHGALDTGAWIHAYVD 351
Query: 360 LNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALN 419
N + + + +SLI M+SKCG I+KA ++FE +DL W++++ G A+HG G++AL+
Sbjct: 352 KNDMNRDGSLDSSLIDMYSKCGDIDKAVQIFEESTRRDLFTWTSIVCGLAMHGRGEKALH 411
Query: 420 LFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDL 479
F KM+ + ++PD V +LSAC+H+G++D G +F+SM+ FG+ P +EHY +VDL
Sbjct: 412 YFSKMKEAQ-VQPDDVTMVGVLSACAHAGLLDQGWWYFQSMEKVFGLVPKVEHYGXMVDL 470
Query: 480 LGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNY 539
LGR G A I MP+E +W LSAC H+NVELGE AA+ LL L P
Sbjct: 471 LGRMGCLKEAYDLIMGMPMEANEIIWGAFLSACRVHNNVELGEVAARRLLGLXPRDPWAR 530
Query: 540 ILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIR 599
++++N++ W + R + + L K PG S +E++GSV F+ GD SH +I
Sbjct: 531 VMLSNMYAEEAKWDRSMGLRKEIKKKGLKKSPGCSSIEVNGSVHGFLVGDNSHPCYTEIN 590
Query: 600 KTLKEL 605
++++
Sbjct: 591 SMVEKI 596
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 115/453 (25%), Positives = 215/453 (47%), Gaps = 48/453 (10%)
Query: 1 MIRNSTNNG--SFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLK 58
MIR NG + + L Y L+ G+ N TF +LKA + + +G+ VH+ V++
Sbjct: 60 MIRKQVENGLITRDPPLLYYMQGLRAGLRPNGHTFMYLLKALVSGQEVKEGEEVHASVVR 119
Query: 59 VGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAI 118
GF FV L+ Y C R+V DEM R +V W II A+ ++A+
Sbjct: 120 TGFACSEFVSGALLGFYVACGLVGKGRQVFDEM--RQPGLVLWTLIIRAYVCVTFPEKAL 177
Query: 119 LVLKEMWVLGLELSASTFVSVVSGCSFRQGI----SMHCCVYKLGLLNNEIPLANSVMSM 174
+ + M +GL +VVS C + +MHC + K G+ + ++++++S
Sbjct: 178 ELFRTMREVGLTPDMVAVSTVVSACGLLGDLGVAKAMHCFIEKSGIEVDAF-VSSTLIST 236
Query: 175 YAKFGKVNEA-------------------------------RSIFDEIGETSIVSWTTII 203
Y + G ++ A + +F + + +VSW ++I
Sbjct: 237 YGECGSLDYAYRFFQETPMKNIVVWNTMIHQSVEHNNLELGKQLFQSMPDRDVVSWNSMI 296
Query: 204 GGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYN 263
GG+ +G EA ++M V+P+ + L+ + CA G L +H+ + K+ N
Sbjct: 297 GGFARIGQYQEALTWFHEMEFSGVSPNALTLLSTLSACASHGALDTGAWIHAYVDKNDMN 356
Query: 264 NEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRL 323
+ LD+ L+ MY+KCGD++ A ++F+ + +F WTS++ G A G +A++ F ++
Sbjct: 357 RDGSLDSSLIDMYSKCGDIDKAVQIFEESTRRDLFTWTSIVCGLAMHGRGEKALHYFSKM 416
Query: 324 LKTSVRPNEATLATTLSACAELGSLSKG----KEIEEYIVLNGLESNRQVQTSLIHMFSK 379
+ V+P++ T+ LSACA G L +G + +E+ GL + ++ + +
Sbjct: 417 KEAQVQPDDVTMVGVLSACAHAGLLDQGWWYFQSMEKVF---GLVPKVEHYGXMVDLLGR 473
Query: 380 CGRINKAKEVFERVP-DKDLAVWSAMINGYAIH 411
G + +A ++ +P + + +W A ++ +H
Sbjct: 474 MGCLKEAYDLIMGMPMEANEIIWGAFLSACRVH 506
>gi|225450928|ref|XP_002280725.1| PREDICTED: pentatricopeptide repeat-containing protein At3g05340
[Vitis vinifera]
Length = 656
Score = 325 bits (833), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 189/607 (31%), Positives = 321/607 (52%), Gaps = 17/607 (2%)
Query: 29 NSFTFPLVLKACANINSIWDGKRVHSHVLK-VGF---------QQDAFVQTGLIDMYSKC 78
N +L C + G +H+ ++K GF + V L+ MYS+C
Sbjct: 43 NQVDISFLLSLCGREGYLHLGSSLHASIIKNFGFLDGNNRDNLRNVIVVWNSLLSMYSRC 102
Query: 79 SDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGL-ELSASTFV 137
+ + KV D MP ++ +SWNS IS + V K+++ G+ + +T
Sbjct: 103 GELRDATKVFDHMP--MKDTISWNSRISGLLGNGDIEMGFRVFKQLYESGIYQFDQATLT 160
Query: 138 SVVSGCSFRQGISMHCCVYKLGLL---NNEIPLANSVMSMYAKFGKVNEARSIFDEIGET 194
+V++ C + + ++ L L EI + N++++ Y + G + R +FDE+ E
Sbjct: 161 TVLTACDKPEFCYVSKMIHSLVFLYGYEREITVGNALITSYFRCGCCSSGRRVFDEMSEK 220
Query: 195 SIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMH 254
++V+WT +I G E+ L +MR V P+ + +L+ ++ C+ + + +H
Sbjct: 221 NVVTWTAVISGLSQGQFYEESLKLFGKMRDGPVDPNSLTYLSSLMACSGLQAIREGRQIH 280
Query: 255 SLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPS 314
L+ K G + + +++ L+ MY+KCG LE A ++F++ E T ++ G AQ G+
Sbjct: 281 GLVWKLGVHFDLCIESALMDMYSKCGSLEDAWKIFESAEEVDEVSMTVILVGLAQNGFEE 340
Query: 315 EAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLI 374
E++ +F +++K V + ++ L SL+ GK+I I+ SN V LI
Sbjct: 341 ESIQVFVKMVKNGVVIDPNMISAILGVFGIDTSLALGKQIHSLIIKKSFGSNYFVNNGLI 400
Query: 375 HMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDA 434
+M+SKCG ++ + ++F +P ++ W++MI +A HG G +AL L+ +M+ +EG+ P
Sbjct: 401 NMYSKCGDLDDSIKIFCWMPQRNSVSWNSMIAAFARHGNGSRALQLYEEMR-LEGVWPTD 459
Query: 435 VVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIH 494
V + S+L AC+H G+V+ G+ F +SM ++GI P +EHY C+VD++GRAG + A K I
Sbjct: 460 VTFLSLLHACAHVGLVEKGMGFLESMAKDYGIGPRMEHYACVVDMMGRAGLLNEAKKFIE 519
Query: 495 EMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKE 554
+P + VW LL AC H N E+G+YAA L P S YIL+AN+++S G WKE
Sbjct: 520 RLPEKPGILVWQALLGACSIHGNSEMGKYAANQLFLQAPESPAPYILLANIYSSEGKWKE 579
Query: 555 AATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKELHIKLLEAGY 614
A M D +TKE G S +EI+ + FV DR H + I L EL +++ GY
Sbjct: 580 RARTIKKMKDMGVTKETGISWIEIEKQIHSFVVEDRMHPHAEIIYGVLGELFKLMMDEGY 639
Query: 615 IAEADIV 621
+ + +
Sbjct: 640 VPDKRFI 646
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/301 (25%), Positives = 145/301 (48%), Gaps = 9/301 (2%)
Query: 11 FEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTG 70
+EE+L + M V NS T+ L AC+ + +I +G+++H V K+G D +++
Sbjct: 238 YEESLKLFGKMRDGPVDPNSLTYLSSLMACSGLQAIREGRQIHGLVWKLGVHFDLCIESA 297
Query: 71 LIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLE 130
L+DMYSKC + K+ + VS I+ ++ +E+I V +M G+
Sbjct: 298 LMDMYSKCGSLEDAWKIFES--AEEVDEVSMTVILVGLAQNGFEEESIQVFVKMVKNGVV 355
Query: 131 LSASTFVSVVS----GCSFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARS 186
+ + +++ S G +H + K +N + N +++MY+K G ++++
Sbjct: 356 IDPNMISAILGVFGIDTSLALGKQIHSLIIKKSFGSNYF-VNNGLINMYSKCGDLDDSIK 414
Query: 187 IFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGN 246
IF + + + VSW ++I + GN + A L +MR V P V FL+L+ CA VG
Sbjct: 415 IFCWMPQRNSVSWNSMIAAFARHGNGSRALQLYEEMRLEGVWPTDVTFLSLLHACAHVGL 474
Query: 247 LFLALS-MHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEK-SVFLWTSMI 304
+ + + S+ G +V M + G L A++ + + EK + +W +++
Sbjct: 475 VEKGMGFLESMAKDYGIGPRMEHYACVVDMMGRAGLLNEAKKFIERLPEKPGILVWQALL 534
Query: 305 G 305
G
Sbjct: 535 G 535
>gi|449453226|ref|XP_004144359.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Cucumis sativus]
Length = 785
Score = 325 bits (833), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 190/567 (33%), Positives = 312/567 (55%), Gaps = 29/567 (5%)
Query: 62 QQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVL 121
+++ GL+ Y +R+V D MP R +VVSW +++ + + + EA +
Sbjct: 157 ERNTISWNGLVSGYINNGMINEAREVFDRMPER--NVVSWTAMVRGYVKEGMISEAETLF 214
Query: 122 KEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKV 181
+M E + ++ ++ G I C ++ + + ++ +++ Y + G++
Sbjct: 215 WQM----PEKNVVSWTVMLGGLLQEGRIDEACRLFDM-MPEKDVVTRTNMIGGYCQVGRL 269
Query: 182 NEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEA---FGLCNQMRRMSVTPDLVVFLNLI 238
EAR +FDE+ ++VSWTT+I GYV V+ A F + + +S T L + N
Sbjct: 270 VEARMLFDEMPRRNVVSWTTMITGYVQNQQVDIARKLFEVMPEKNEVSWTAMLKGYTN-- 327
Query: 239 LGCAQV---GNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEK 295
C ++ LF A+ + S++ N ++ + + G++ AR+VFD + EK
Sbjct: 328 --CGRLDEASELFNAMPIKSVVAC----------NAMILCFGQNGEVPKARQVFDQMREK 375
Query: 296 SVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIE 355
W++MI Y + G +A+ LF+ + + +RPN +L + LS CA L +L G+EI
Sbjct: 376 DEGTWSAMIKVYERKGLELDALELFRMMQREGIRPNFPSLISVLSVCAGLANLDHGREIH 435
Query: 356 EYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGD 415
+V + + + V + L+ M+ KCG + KAK+VF+R KD+ +W+++I GYA HG+G
Sbjct: 436 AQLVRSQFDLDVYVASVLLSMYIKCGNLAKAKQVFDRFAVKDVVMWNSIITGYAQHGLGV 495
Query: 416 QALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLC 475
+AL +F+ M H G+ PD V + +LSACS++G V GL F SM++ + +E IEHY C
Sbjct: 496 EALRVFHDM-HFSGIMPDDVTFVGVLSACSYTGNVKKGLEIFNSMETKYQVEQKIEHYAC 554
Query: 476 LVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGS 535
+VDLLGRAG+ + A+ I +MP+E A +W LL AC H ++L E AAK LL L P +
Sbjct: 555 MVDLLGRAGKLNEAMDLIEKMPMEADAIIWGALLGACRTHMKLDLAEVAAKKLLVLEPKN 614
Query: 536 TGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLS 595
G +IL++N++ S G W + A R M DRR++K PG S + ++ V F GD S H
Sbjct: 615 AGPFILLSNIYASQGRWDDVAELRRNMRDRRVSKYPGCSWIVVEKKVHKFTGGDSSGHPE 674
Query: 596 -VDIRKTLKELHIKLLEAGYIAEADIV 621
+I + L+ L L EAGY + V
Sbjct: 675 HSEINRILEWLSGLLREAGYYPDQSFV 701
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 92/366 (25%), Positives = 165/366 (45%), Gaps = 74/366 (20%)
Query: 162 NNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIG----------------- 204
+N I NS+++ Y++ G++ +AR +FDE+ + +I+SW +I+
Sbjct: 95 SNFIISRNSLITRYSRLGQIEKARVVFDEMRDKNIISWNSIVAGYFQNKRPQEAQNMFDK 154
Query: 205 --------------GYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVG----- 245
GY+N G +NEA + ++M +V V + ++ G + G
Sbjct: 155 MSERNTISWNGLVSGYINNGMINEAREVFDRMPERNV----VSWTAMVRGYVKEGMISEA 210
Query: 246 -NLFLALSMHSL---------LLKSGYNNED-------PLDNL-----LVSMYTKCGDLE 283
LF + ++ LL+ G +E P ++ ++ Y + G L
Sbjct: 211 ETLFWQMPEKNVVSWTVMLGGLLQEGRIDEACRLFDMMPEKDVVTRTNMIGGYCQVGRLV 270
Query: 284 LARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACA 343
AR +FD + ++V WT+MI GY Q ++ V++ ++L + NE + L
Sbjct: 271 EARMLFDEMPRRNVVSWTTMITGYVQ----NQQVDIARKLFEVMPEKNEVSWTAMLKGYT 326
Query: 344 ELGSLSKGKEIEEYIVLNGLESNRQVQ-TSLIHMFSKCGRINKAKEVFERVPDKDLAVWS 402
G L + E+ N + V ++I F + G + KA++VF+++ +KD WS
Sbjct: 327 NCGRLDEASEL-----FNAMPIKSVVACNAMILCFGQNGEVPKARQVFDQMREKDEGTWS 381
Query: 403 AMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSM-Q 461
AMI Y G+ AL LF MQ EG++P+ S+LS C+ +D G + +
Sbjct: 382 AMIKVYERKGLELDALELFRMMQR-EGIRPNFPSLISVLSVCAGLANLDHGREIHAQLVR 440
Query: 462 SNFGIE 467
S F ++
Sbjct: 441 SQFDLD 446
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 105/210 (50%), Gaps = 7/210 (3%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI+ G + L + M + G+ N + VL CA + ++ G+ +H+ +++
Sbjct: 383 MIKVYERKGLELDALELFRMMQREGIRPNFPSLISVLSVCAGLANLDHGREIHAQLVRSQ 442
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F D +V + L+ MY KC + +++V D V + VV WNSII+ +++ L EA+ V
Sbjct: 443 FDLDVYVASVLLSMYIKCGNLAKAKQVFDRFAV--KDVVMWNSIITGYAQHGLGVEALRV 500
Query: 121 LKEMWVLGLELSASTFVSVVSGCSF----RQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
+M G+ TFV V+S CS+ ++G+ + + + +I ++ +
Sbjct: 501 FHDMHFSGIMPDDVTFVGVLSACSYTGNVKKGLEIFNSMETKYQVEQKIEHYACMVDLLG 560
Query: 177 KFGKVNEARSIFDEIG-ETSIVSWTTIIGG 205
+ GK+NEA + +++ E + W ++G
Sbjct: 561 RAGKLNEAMDLIEKMPMEADAIIWGALLGA 590
>gi|359485813|ref|XP_003633340.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 679
Score = 325 bits (833), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 189/583 (32%), Positives = 316/583 (54%), Gaps = 29/583 (4%)
Query: 50 KRVHSHVLKVGFQQDAFVQTGLIDMYS--KCSDFVSSRKVLDEMPVRLRSVVSWNSIISA 107
+++H+ LK FV + L+ +YS K +D +R + D ++ RS++ WN+II
Sbjct: 30 EQLHAFSLKTAIFNHPFVSSRLLALYSDPKINDLGYARSIFDR--IQRRSLIHWNTIIKC 87
Query: 108 HSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNN 163
+ + + I++ E+ V T V+ GC+ ++G +H K+G +
Sbjct: 88 YVENQFSHDGIVLFHEL-VHEYLPDNFTLPCVIKGCARLGVVQEGKQIHGLALKIGF-GS 145
Query: 164 EIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMR 223
++ + S+++MY+K G+++ AR +FD + + +V W ++I GY G ++ A L +M
Sbjct: 146 DVFVQGSLVNMYSKCGEIDCARKVFDGMIDKDVVLWNSLIDGYARCGEIDIALQLFEEMP 205
Query: 224 RMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNL-----LVSMYTK 278
D + L+ G ++ G + A + ++ P NL +++ Y K
Sbjct: 206 ER----DAFSWTVLVDGLSKCGKVESARKLF---------DQMPCRNLVSWNAMINGYMK 252
Query: 279 CGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATT 338
GD + A +F + + W MI GY G +AV +F +LK RP+ ATL +
Sbjct: 253 SGDFDSALELFYQMPIWDLVTWNLMIAGYELNGQFMDAVKMFFMMLKLGSRPSHATLVSV 312
Query: 339 LSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDL 398
LSA + L L KG+ I Y+ NG E + + TSLI M++KCG I A VF + K +
Sbjct: 313 LSAVSGLAVLGKGRWIHSYMEKNGFELDGILGTSLIEMYAKCGCIESALTVFRAIQKKKV 372
Query: 399 AVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFK 458
W+A+I G IHGM + AL LF +M GLKP+A+++ +L+AC+H+G+VDDG +F
Sbjct: 373 GHWTAIIVGLGIHGMANHALALFLEMCKT-GLKPNAIIFIGVLNACNHAGLVDDGRQYFD 431
Query: 459 SMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNV 518
M + + IEP++EHY CLVD+L RAG + A TI MP+ +W LL H +
Sbjct: 432 MMMNEYKIEPTLEHYGCLVDILCRAGHLEEAKNTIENMPISPNKVIWMSLLGGSRNHGKI 491
Query: 519 ELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEI 578
++GEYAA+ ++ + P + G YIL++N++ ++GMW++ + R +M R K+PG S VE
Sbjct: 492 DIGEYAAQRVIEVAPETIGCYILLSNMYAASGMWEKVSHVREMMYKRGFRKDPGCSSVEH 551
Query: 579 DGSVQVFVAGDRSHHLSVDIRKTLKELHIKLLEAGYIAEADIV 621
G++ F+ GD SH + +I + E+ KL G++ + V
Sbjct: 552 KGTLHEFIVGDISHPQTKEIYAKMSEMKEKLKCVGHVPDTTQV 594
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 132/459 (28%), Positives = 222/459 (48%), Gaps = 33/459 (7%)
Query: 29 NSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVL 88
++FT P V+K CA + + +GK++H LK+GF D FVQ L++MYSKC + +RKV
Sbjct: 111 DNFTLPCVIKGCARLGVVQEGKQIHGLALKIGFGSDVFVQGSLVNMYSKCGEIDCARKVF 170
Query: 89 DEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCSFRQG 148
D M + VV WNS+I ++R D A+ + +EM E A ++ +V G S
Sbjct: 171 DGMID--KDVVLWNSLIDGYARCGEIDIALQLFEEM----PERDAFSWTVLVDGLSKCGK 224
Query: 149 ISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVN 208
+ ++ N + N++++ Y K G + A +F ++ +V+W +I GY
Sbjct: 225 VESARKLFDQMPCRNLVSW-NAMINGYMKSGDFDSALELFYQMPIWDLVTWNLMIAGYEL 283
Query: 209 VGNVNEAFGLCNQMRRMSVTPD---LVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNE 265
G +A + M ++ P LV L+ + G A +G +HS + K+G+ +
Sbjct: 284 NGQFMDAVKMFFMMLKLGSRPSHATLVSVLSAVSGLAVLGK---GRWIHSYMEKNGFELD 340
Query: 266 DPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLK 325
L L+ MY KCG +E A VF A+ +K V WT++I G G + A+ LF + K
Sbjct: 341 GILGTSLIEMYAKCGCIESALTVFRAIQKKKVGHWTAIIVGLGIHGMANHALALFLEMCK 400
Query: 326 TSVRPNEATLATTLSACAELGSLSKGKE-----IEEYIVLNGLESNRQVQTSLIHMFSKC 380
T ++PN L+AC G + G++ + EY + LE L+ + +
Sbjct: 401 TGLKPNAIIFIGVLNACNHAGLVDDGRQYFDMMMNEYKIEPTLEH----YGCLVDILCRA 456
Query: 381 GRINKAKEVFERVP-DKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAV-VYT 438
G + +AK E +P + +W +++ G HG D Y Q V + P+ + Y
Sbjct: 457 GHLEEAKNTIENMPISPNKVIWMSLLGGSRNHGKIDIGE---YAAQRVIEVAPETIGCYI 513
Query: 439 SILSACSHSGMVDDGLSFFKSM--QSNFGIEP---SIEH 472
+ + + SGM + +S + M + F +P S+EH
Sbjct: 514 LLSNMYAASGMWEK-VSHVREMMYKRGFRKDPGCSSVEH 551
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 110/240 (45%), Gaps = 15/240 (6%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI NG F + + + ML+ G + T VL A + + + G+ +HS++ K G
Sbjct: 277 MIAGYELNGQFMDAVKMFFMMLKLGSRPSHATLVSVLSAVSGLAVLGKGRWIHSYMEKNG 336
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F+ D + T LI+MY+KC S+ V ++ + V W +II + + A+ +
Sbjct: 337 FELDGILGTSLIEMYAKCGCIESALTVFR--AIQKKKVGHWTAIIVGLGIHGMANHALAL 394
Query: 121 LKEMWVLGLELSASTFVSVVSGCSF-------RQGISMHCCVYKLGLLNNEIPLANSVMS 173
EM GL+ +A F+ V++ C+ RQ M YK + + ++
Sbjct: 395 FLEMCKTGLKPNAIIFIGVLNACNHAGLVDDGRQYFDMMMNEYK---IEPTLEHYGCLVD 451
Query: 174 MYAKFGKVNEARSIFDEIG-ETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLV 232
+ + G + EA++ + + + V W +++GG N G ++ G R + V P+ +
Sbjct: 452 ILCRAGHLEEAKNTIENMPISPNKVIWMSLLGGSRNHGKID--IGEYAAQRVIEVAPETI 509
>gi|15221400|ref|NP_172104.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174948|sp|Q9LND4.1|PPR14_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g06140, mitochondrial; Flags: Precursor
gi|8810476|gb|AAF80137.1|AC024174_19 Contains similarity to a hypothetical protein F24K9.13 gi|6006885
from Arabidopsis thaliana gb|AC008153 and contains
multiple PPR PF|01535 repeats [Arabidopsis thaliana]
gi|332189825|gb|AEE27946.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 558
Score = 325 bits (832), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 178/538 (33%), Positives = 303/538 (56%), Gaps = 13/538 (2%)
Query: 50 KRVHSHVLKVGFQQDAFVQTGLIDMYSKCS--DFVSSRKVLDEMPVRLRSVVSWNSIISA 107
++VH+ V+ GF+ + + + L + Y + + DF +S + +P R+ SWN+I+S
Sbjct: 24 QQVHAKVIIHGFEDEVVLGSSLTNAYIQSNRLDFATSS--FNRIPCWKRNRHSWNTILSG 81
Query: 108 HSRA--CLNDEAILVLKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLL 161
+S++ C + +L+ M + + V + C GI +H K GL
Sbjct: 82 YSKSKTCCYSDVLLLYNRMRRHCDGVDSFNLVFAIKACVGLGLLENGILIHGLAMKNGLD 141
Query: 162 NNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQ 221
++ +A S++ MYA+ G + A+ +FDEI + V W ++ GY+ E F L
Sbjct: 142 KDDY-VAPSLVEMYAQLGTMESAQKVFDEIPVRNSVLWGVLMKGYLKYSKDPEVFRLFCL 200
Query: 222 MRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGY-NNEDPLDNLLVSMYTKCG 280
MR + D + + L+ C V + +H + ++ + + D L ++ MY KC
Sbjct: 201 MRDTGLALDALTLICLVKACGNVFAGKVGKCVHGVSIRRSFIDQSDYLQASIIDMYVKCR 260
Query: 281 DLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLS 340
L+ AR++F+ ++++V +WT++I G+A+ EA +LF+++L+ S+ PN+ TLA L
Sbjct: 261 LLDNARKLFETSVDRNVVMWTTLISGFAKCERAVEAFDLFRQMLRESILPNQCTLAAILV 320
Query: 341 ACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAV 400
+C+ LGSL GK + Y++ NG+E + TS I M+++CG I A+ VF+ +P++++
Sbjct: 321 SCSSLGSLRHGKSVHGYMIRNGIEMDAVNFTSFIDMYARCGNIQMARTVFDMMPERNVIS 380
Query: 401 WSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSM 460
WS+MIN + I+G+ ++AL+ F+KM+ + + P++V + S+LSACSHSG V +G F+SM
Sbjct: 381 WSSMINAFGINGLFEEALDCFHKMKS-QNVVPNSVTFVSLLSACSHSGNVKEGWKQFESM 439
Query: 461 QSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVEL 520
++G+ P EHY C+VDLLGRAG A I MPV+ A W LLSAC H V+L
Sbjct: 440 TRDYGVVPEEEHYACMVDLLGRAGEIGEAKSFIDNMPVKPMASAWGALLSACRIHKEVDL 499
Query: 521 GEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEI 578
A+ LL++ P + Y+L++N++ AGMW+ R M + K G S E+
Sbjct: 500 AGEIAEKLLSMEPEKSSVYVLLSNIYADAGMWEMVNCVRRKMGIKGYRKHVGQSATEV 557
Score = 191 bits (486), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 118/439 (26%), Positives = 217/439 (49%), Gaps = 8/439 (1%)
Query: 11 FEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTG 70
+ + L Y+ M + +SF +KAC + + +G +H +K G +D +V
Sbjct: 90 YSDVLLLYNRMRRHCDGVDSFNLVFAIKACVGLGLLENGILIHGLAMKNGLDKDDYVAPS 149
Query: 71 LIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLE 130
L++MY++ S++KV DE+PV R+ V W ++ + + + E + M GL
Sbjct: 150 LVEMYAQLGTMESAQKVFDEIPV--RNSVLWGVLMKGYLKYSKDPEVFRLFCLMRDTGLA 207
Query: 131 LSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARS 186
L A T + +V C + + G +H + ++ L S++ MY K ++ AR
Sbjct: 208 LDALTLICLVKACGNVFAGKVGKCVHGVSIRRSFIDQSDYLQASIIDMYVKCRLLDNARK 267
Query: 187 IFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGN 246
+F+ + ++V WTT+I G+ EAF L QM R S+ P+ +++ C+ +G+
Sbjct: 268 LFETSVDRNVVMWTTLISGFAKCERAVEAFDLFRQMLRESILPNQCTLAAILVSCSSLGS 327
Query: 247 LFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGG 306
L S+H ++++G + + MY +CG++++AR VFD + E++V W+SMI
Sbjct: 328 LRHGKSVHGYMIRNGIEMDAVNFTSFIDMYARCGNIQMARTVFDMMPERNVISWSSMINA 387
Query: 307 YAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKG-KEIEEYIVLNGLES 365
+ G EA++ F ++ +V PN T + LSAC+ G++ +G K+ E G+
Sbjct: 388 FGINGLFEEALDCFHKMKSQNVVPNSVTFVSLLSACSHSGNVKEGWKQFESMTRDYGVVP 447
Query: 366 NRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLA-VWSAMINGYAIHGMGDQALNLFYKM 424
+ ++ + + G I +AK + +P K +A W A+++ IH D A + K+
Sbjct: 448 EEEHYACMVDLLGRAGEIGEAKSFIDNMPVKPMASAWGALLSACRIHKEVDLAGEIAEKL 507
Query: 425 QHVEGLKPDAVVYTSILSA 443
+E K V S + A
Sbjct: 508 LSMEPEKSSVYVLLSNIYA 526
Score = 46.6 bits (109), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 38/187 (20%), Positives = 91/187 (48%), Gaps = 19/187 (10%)
Query: 339 LSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVP--DK 396
L+ ++ +L+ +++ ++++G E + +SL + + + R++ A F R+P +
Sbjct: 11 LTILSQAKTLNHTQQVHAKVIIHGFEDEVVLGSSLTNAYIQSNRLDFATSSFNRIPCWKR 70
Query: 397 DLAVWSAMINGYAIHGMG--DQALNLFYKM-QHVEGLKPDAVVYTSILSACSHSGMVDD- 452
+ W+ +++GY+ L L+ +M +H +G+ +V+ + AC G++++
Sbjct: 71 NRHSWNTILSGYSKSKTCCYSDVLLLYNRMRRHCDGVDSFNLVFA--IKACVGLGLLENG 128
Query: 453 ----GLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPL 508
GL+ + + + PS LV++ + G + A K E+PV + +W L
Sbjct: 129 ILIHGLAMKNGLDKDDYVAPS------LVEMYAQLGTMESAQKVFDEIPVR-NSVLWGVL 181
Query: 509 LSACMKH 515
+ +K+
Sbjct: 182 MKGYLKY 188
Score = 43.9 bits (102), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 50/101 (49%), Gaps = 2/101 (1%)
Query: 8 NGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDG-KRVHSHVLKVGFQQDAF 66
NG FEE L + M V NS TF +L AC++ ++ +G K+ S G +
Sbjct: 391 NGLFEEALDCFHKMKSQNVVPNSVTFVSLLSACSHSGNVKEGWKQFESMTRDYGVVPEEE 450
Query: 67 VQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISA 107
++D+ + + ++ +D MPV+ + +W +++SA
Sbjct: 451 HYACMVDLLGRAGEIGEAKSFIDNMPVKPMA-SAWGALLSA 490
>gi|15231402|ref|NP_188004.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75273848|sp|Q9LRV9.1|PP228_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g13880
gi|9294611|dbj|BAB02912.1| probable selenium-binding protein [Arabidopsis thaliana]
gi|332641909|gb|AEE75430.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 748
Score = 325 bits (832), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 187/617 (30%), Positives = 323/617 (52%), Gaps = 16/617 (2%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+I T G +E+ + + + + + FT+ L C + G+ +H V+ G
Sbjct: 119 LISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGALGFCGERCDLDLGELLHGLVVVNG 178
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
Q F+ LIDMYSKC + + D R VSWNS+IS + R +E + +
Sbjct: 179 LSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDER--DQVSWNSLISGYVRVGAAEEPLNL 236
Query: 121 LKEMWVLGLELSASTFVSVVSGCSF-------RQGISMHCCVYKLGLLNNEIPLANSVMS 173
L +M GL L+ SV+ C +G+++HC KLG+ +I + +++
Sbjct: 237 LAKMHRDGLNLTTYALGSVLKACCINLNEGFIEKGMAIHCYTAKLGM-EFDIVVRTALLD 295
Query: 174 MYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNV-----NEAFGLCNQMRRMSVT 228
MYAK G + EA +F + ++V++ +I G++ + + +EAF L M+R +
Sbjct: 296 MYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITDEASSEAFKLFMDMQRRGLE 355
Query: 229 PDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRV 288
P F ++ C+ L +H+L+ K+ + +++ + + L+ +Y G E +
Sbjct: 356 PSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEFIGSALIELYALMGSTEDGMQC 415
Query: 289 FDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSL 348
F + ++ + WTSMI + Q A +LF++L + +RP E T++ +SACA+ +L
Sbjct: 416 FASTSKQDIASWTSMIDCHVQNEQLESAFDLFRQLFSSHIRPEEYTVSLMMSACADFAAL 475
Query: 349 SKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGY 408
S G++I+ Y + +G+++ V+TS I M++K G + A +VF V + D+A +SAMI+
Sbjct: 476 SSGEQIQGYAIKSGIDAFTSVKTSSISMYAKSGNMPLANQVFIEVQNPDVATYSAMISSL 535
Query: 409 AIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEP 468
A HG ++ALN+F M+ G+KP+ + +L AC H G+V GL +F+ M++++ I P
Sbjct: 536 AQHGSANEALNIFESMK-THGIKPNQQAFLGVLIACCHGGLVTQGLKYFQCMKNDYRINP 594
Query: 469 SIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNL 528
+ +H+ CLVDLLGR GR A I + W LLS+C + + +G+ A+ L
Sbjct: 595 NEKHFTCLVDLLGRTGRLSDAENLILSSGFQDHPVTWRALLSSCRVYKDSVIGKRVAERL 654
Query: 529 LTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAG 588
+ L P ++G+Y+L+ N++ +G+ A R LM DR + KEP S + I F
Sbjct: 655 MELEPEASGSYVLLHNIYNDSGVNSSAEEVRELMRDRGVKKEPALSWIVIGNQTHSFAVA 714
Query: 589 DRSHHLSVDIRKTLKEL 605
D SH S I L+ +
Sbjct: 715 DLSHPSSQMIYTMLETM 731
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 144/597 (24%), Positives = 270/597 (45%), Gaps = 62/597 (10%)
Query: 33 FPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMP 92
+ ++ + A S+ GK H H++K ++ L++MY KC + +R++ D MP
Sbjct: 50 YKILFQTAAKSGSVVLGKLAHGHMIKSSLNPCLYLLNNLLNMYCKCRELGFARQLFDRMP 109
Query: 93 VRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCSFRQGISMH 152
R+++S+NS+IS +++ ++A+ + E L+L T+ + C R + +
Sbjct: 110 E--RNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGALGFCGERCDLDLG 167
Query: 153 CCVYKLGLLN---NEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNV 209
++ L ++N ++ L N ++ MY+K GK+++A S+FD E VSW ++I GYV V
Sbjct: 168 ELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNSLISGYVRV 227
Query: 210 GNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCA---QVGNLFLALSMHSLLLKSGYNNED 266
G E L +M R + +++ C G + +++H K G +
Sbjct: 228 GAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEKGMAIHCYTAKLGMEFDI 287
Query: 267 PLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLG-----YPSEAVNLFK 321
+ L+ MY K G L+ A ++F + K+V + +MI G+ Q+ SEA LF
Sbjct: 288 VVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITDEASSEAFKLFM 347
Query: 322 RLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCG 381
+ + + P+ +T + L AC+ +L G++I I N +S+ + ++LI +++ G
Sbjct: 348 DMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEFIGSALIELYALMG 407
Query: 382 RINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSIL 441
+ F +D+A W++MI+ + + + A +LF ++ ++P+ + ++
Sbjct: 408 STEDGMQCFASTSKQDIASWTSMIDCHVQNEQLESAFDLFRQL-FSSHIRPEEYTVSLMM 466
Query: 442 SACSH-----SG------MVDDGLSFFKSMQSN----------------FGIE---PSIE 471
SAC+ SG + G+ F S++++ IE P +
Sbjct: 467 SACADFAALSSGEQIQGYAIKSGIDAFTSVKTSSISMYAKSGNMPLANQVFIEVQNPDVA 526
Query: 472 HYLCLVDLLGRAGRFDLALKTIHEMP---VEVQAQVWAPLLSACMKHHNVELG-EY--AA 525
Y ++ L + G + AL M ++ Q + +L AC V G +Y
Sbjct: 527 TYSAMISSLAQHGSANEALNIFESMKTHGIKPNQQAFLGVLIACCHGGLVTQGLKYFQCM 586
Query: 526 KNLLTLNP------------GSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKE 570
KN +NP G TG NL S+G T R L+ R+ K+
Sbjct: 587 KNDYRINPNEKHFTCLVDLLGRTGRLSDAENLILSSGFQDHPVTWRALLSSCRVYKD 643
Score = 129 bits (325), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 93/317 (29%), Positives = 162/317 (51%), Gaps = 12/317 (3%)
Query: 184 ARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQ 243
A++ F+ I + S+V T+I V +G LC + + D + L A+
Sbjct: 7 AKTFFNNIAQDSLV---TLITKRVGLG-YRFLSSLC---QPKNTALDSEGYKILFQTAAK 59
Query: 244 VGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSM 303
G++ L H ++KS N L N L++MY KC +L AR++FD + E+++ + S+
Sbjct: 60 SGSVVLGKLAHGHMIKSSLNPCLYLLNNLLNMYCKCRELGFARQLFDRMPERNIISFNSL 119
Query: 304 IGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGL 363
I GY Q+G+ +A+ LF + +++ ++ T A L C E L G+ + +V+NGL
Sbjct: 120 ISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGALGFCGERCDLDLGELLHGLVVVNGL 179
Query: 364 ESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYK 423
+ LI M+SKCG++++A +F+R ++D W+++I+GY G ++ LNL K
Sbjct: 180 SQQVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNSLISGYVRVGAAEEPLNLLAK 239
Query: 424 MQHVEGLKPDAVVYTSILSACS---HSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLL 480
M H +GL S+L AC + G ++ G++ + G+E I L+D+
Sbjct: 240 M-HRDGLNLTTYALGSVLKACCINLNEGFIEKGMA-IHCYTAKLGMEFDIVVRTALLDMY 297
Query: 481 GRAGRFDLALKTIHEMP 497
+ G A+K MP
Sbjct: 298 AKNGSLKEAIKLFSLMP 314
>gi|217426788|gb|ACK44496.1| AT5G09950-like protein [Arabidopsis arenosa]
Length = 772
Score = 325 bits (832), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 195/578 (33%), Positives = 317/578 (54%), Gaps = 12/578 (2%)
Query: 49 GKRVHSHVLKVGFQQDAF-VQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISA 107
G+ VH HV+ G + GL++MY+KC +R+V M + VSWNS+I+
Sbjct: 52 GREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFCFM--MEKDSVSWNSMITG 109
Query: 108 HSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNN 163
+ EA+ + M + + T +S +S C+ + G +H KLG+ N
Sbjct: 110 LDQNGCFIEAVERYQSMRRHEILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLN 169
Query: 164 EIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVG-NVNEAFGLCNQM 222
+ ++N++M++YA+ G +NE R IF + E VSW +IIG + ++ EA
Sbjct: 170 -VSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALASSERSLPEAVACFLNA 228
Query: 223 RRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDL 282
R + + F +++ + + L +H L LK +E +N L++ Y KCG++
Sbjct: 229 LRAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKYNIADEATTENALIACYGKCGEM 288
Query: 283 ELARRVFDAVLEK-SVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSA 341
+ ++F + E+ W SMI GY ++A++L +L+T R + AT LSA
Sbjct: 289 DGCEKIFSRMSERRDDVTWNSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSA 348
Query: 342 CAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVW 401
A + +L +G E+ V LES+ V ++L+ M+SKCGR++ A F +P ++ W
Sbjct: 349 FASVATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSW 408
Query: 402 SAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQ 461
++MI+GYA HG G++AL LF M+ PD V + +LSACSH+G++++G F+SM
Sbjct: 409 NSMISGYARHGQGEEALKLFANMKLDGQTPPDHVTFVGVLSACSHAGLLEEGFKHFESMS 468
Query: 462 SNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHH--NVE 519
++G+ P IEH+ C+ DLLGRAG D I +MPV+ +W +L AC + + E
Sbjct: 469 DSYGLAPRIEHFSCMADLLGRAGELDKLEDFIDKMPVKPNVLIWRTVLGACCRANGRKAE 528
Query: 520 LGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEID 579
LG+ AA+ L L P + NY+L+ N++ + G W++ AR M D + KE G+S V +
Sbjct: 529 LGKKAAEMLFQLEPENAVNYVLLGNMYAAGGRWEDLVKARKKMKDADVKKEAGYSWVTMK 588
Query: 580 GSVQVFVAGDRSHHLSVDIRKTLKELHIKLLEAGYIAE 617
V +FVAGD+SH + I K LKEL+ K+ +AGY+ +
Sbjct: 589 DGVHMFVAGDKSHPDTDVIYKKLKELNRKMRDAGYVPQ 626
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 112/430 (26%), Positives = 203/430 (47%), Gaps = 9/430 (2%)
Query: 131 LSASTFVSVVSGCSFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDE 190
LS+ S+ ++G +H V GL++ + + N +++MYAK G + +AR +F
Sbjct: 35 LSSFPEYSLAEQVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFCF 94
Query: 191 IGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLA 250
+ E VSW ++I G G EA MRR + P ++ + CA + L
Sbjct: 95 MMEKDSVSWNSMITGLDQNGCFIEAVERYQSMRRHEILPGSFTLISSLSSCASLKWAKLG 154
Query: 251 LSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYA-- 308
+H LK G + + N L+++Y + G L R++F ++ E W S+IG A
Sbjct: 155 QQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALASS 214
Query: 309 QLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQ 368
+ P EAV F L+ + N T ++ LSA + L GK+I + +
Sbjct: 215 ERSLP-EAVACFLNALRAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKYNIADEAT 273
Query: 369 VQTSLIHMFSKCGRINKAKEVFERVPD-KDLAVWSAMINGYAIHGMGDQALNLFYKMQHV 427
+ +LI + KCG ++ +++F R+ + +D W++MI+GY + + +AL+L + M
Sbjct: 274 TENALIACYGKCGEMDGCEKIFSRMSERRDDVTWNSMISGYIHNELLAKALDLVWFMLQT 333
Query: 428 EGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFD 487
G + D+ +Y ++LSA + ++ G+ + +E + LVD+ + GR D
Sbjct: 334 -GQRLDSFMYATVLSAFASVATLERGME-VHACSVRACLESDVVVGSALVDMYSKCGRLD 391
Query: 488 LALKTIHEMPVEVQAQVWAPLLSACMKHHNVE--LGEYAAKNLLTLNPGSTGNYILMANL 545
AL+ + MPV + W ++S +H E L +A L P ++ + +
Sbjct: 392 YALRFFNTMPVR-NSYSWNSMISGYARHGQGEEALKLFANMKLDGQTPPDHVTFVGVLSA 450
Query: 546 FTSAGMWKEA 555
+ AG+ +E
Sbjct: 451 CSHAGLLEEG 460
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 101/211 (47%), Gaps = 8/211 (3%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI +N + L MLQTG +SF + VL A A++ ++ G VH+ ++
Sbjct: 310 MISGYIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRAC 369
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+ D V + L+DMYSKC + + + MPV R+ SWNS+IS ++R +EA+ +
Sbjct: 370 LESDVVVGSALVDMYSKCGRLDYALRFFNTMPV--RNSYSWNSMISGYARHGQGEEALKL 427
Query: 121 LKEMWVLG-LELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMY 175
M + G TFV V+S CS +G + L I + + +
Sbjct: 428 FANMKLDGQTPPDHVTFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSCMADLL 487
Query: 176 AKFGKVNEARSIFDEIG-ETSIVSWTTIIGG 205
+ G++++ D++ + +++ W T++G
Sbjct: 488 GRAGELDKLEDFIDKMPVKPNVLIWRTVLGA 518
>gi|147834193|emb|CAN75306.1| hypothetical protein VITISV_040403 [Vitis vinifera]
Length = 826
Score = 325 bits (832), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 189/571 (33%), Positives = 311/571 (54%), Gaps = 10/571 (1%)
Query: 12 EETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRV-HSHVLKVGFQQDAFVQTG 70
E + + ML T N T V++A + + + D RV V+K+GF+ + V T
Sbjct: 71 ELAVGLFKMMLMTEQRPNHVTVLSVIRAISGLG-LEDMMRVICGSVIKLGFESEVSVATA 129
Query: 71 LIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLE 130
LI YS D K+ ++ P++ +V W++++SA ++ EA + + M G+E
Sbjct: 130 LIGFYSD-YDMGIVWKIFNQTPIK--DLVLWSAMVSACVKSGQYGEAFEIFRAMQYDGVE 186
Query: 131 LSASTFVSVVSGCSFRQGISMHCCVYKLGLLNNEIPLAN---SVMSMYAKFGKVNEARSI 187
+ + VS++ C+ + ++ + PL N S++ MYAK + +
Sbjct: 187 PNHVSIVSILPACANVGALLFGKEIHGFSIKKMFHPLTNVHNSLVDMYAKCRNFKASMLV 246
Query: 188 FDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNL 247
FD+I E ++SWTTII G + EAF ++M+ D + +LI+ Q
Sbjct: 247 FDQILEKDLISWTTIIRGCIENDCPREAFKAFSRMQFSCFGADETIVQDLIVAIIQADEH 306
Query: 248 FLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGY 307
++ H LLK+G + L+ MY K G+LE A VFD + +K W++MI +
Sbjct: 307 KFGIAFHGFLLKNGLLAFVSIGTALLQMYAKFGELESAIIVFDQLNKKDYISWSAMISVH 366
Query: 308 AQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNR 367
A +P A+ FK++ T RPNE T + L AC+ +G+ G+ I+ + G SN
Sbjct: 367 AHSRHPYNALETFKQMQSTDERPNEITFVSLLQACSLIGAQELGESIQAHATKAGYLSNA 426
Query: 368 QVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHV 427
+ ++LI ++ K GRIN+ + +F +P KDL WS+MINGY ++G GD+AL F M
Sbjct: 427 FLSSALIDLYCKFGRINQGRAIFNEIPTKDLVCWSSMINGYGLNGCGDEALETFSNMLAC 486
Query: 428 EGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFD 487
G+KP+ VV+ S+LSACSH G+ +G S F SM+ +GI P + HY C+VDL+ R G +
Sbjct: 487 -GVKPNEVVFISVLSACSHCGLEHEGWSCFSSMEQKYGIIPKLPHYACMVDLISRRGNIE 545
Query: 488 LALKTIHEMPVEVQAQVWAPLLSACMKHH-NVELGEYAAKNLLTLNPGSTGNYILMANLF 546
AL+ +++MP+E ++W LL+ C H ++E+ E A+ L+ L+P +T Y++++NL+
Sbjct: 546 GALQFVNKMPMEPDKRIWGALLAGCRSTHGSIEIAELVAERLIGLDPQNTSYYVILSNLY 605
Query: 547 TSAGMWKEAATARGLMDDRRLTKEPGWSQVE 577
G W + R L+D++ L KE G+S +E
Sbjct: 606 AEQGRWGDVERLRKLVDEKGLKKEMGYSMIE 636
Score = 176 bits (445), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 125/458 (27%), Positives = 217/458 (47%), Gaps = 31/458 (6%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
M+ +G + E + +M GV N + +L ACAN+ ++ GK +H +K
Sbjct: 160 MVSACVKSGQYGEAFEIFRAMQYDGVEPNHVSIVSILPACANVGALLFGKEIHGFSIKKM 219
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACL-ND---E 116
F V L+DMY+KC +F +S V D+ + + ++SW +II R C+ ND E
Sbjct: 220 FHPLTNVHNSLVDMYAKCRNFKASMLVFDQ--ILEKDLISWTTII----RGCIENDCPRE 273
Query: 117 AILVLKEMWV--LGLE--LSASTFVSVVSGCSFRQGISMHCCVYKLGLLNNEIPLANSVM 172
A M G + + V+++ + GI+ H + K GLL + + +++
Sbjct: 274 AFKAFSRMQFSCFGADETIVQDLIVAIIQADEHKFGIAFHGFLLKNGLLAF-VSIGTALL 332
Query: 173 SMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLV 232
MYAKFG++ A +FD++ + +SW+ +I + + + A QM+ P+ +
Sbjct: 333 QMYAKFGELESAIIVFDQLNKKDYISWSAMISVHAHSRHPYNALETFKQMQSTDERPNEI 392
Query: 233 VFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAV 292
F++L+ C+ +G L S+ + K+GY + L + L+ +Y K G + R +F+ +
Sbjct: 393 TFVSLLQACSLIGAQELGESIQAHATKAGYLSNAFLSSALIDLYCKFGRINQGRAIFNEI 452
Query: 293 LEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGK 352
K + W+SMI GY G EA+ F +L V+PNE + LSAC+ G
Sbjct: 453 PTKDLVCWSSMINGYGLNGCGDEALETFSNMLACGVKPNEVVFISVLSACSHCGL----- 507
Query: 353 EIEEYIVLNGLESNRQVQTSLIH------MFSKCGRINKAKEVFERVP-DKDLAVWSAMI 405
E E + + +E + L H + S+ G I A + ++P + D +W A++
Sbjct: 508 EHEGWSCFSSMEQKYGIIPKLPHYACMVDLISRRGNIEGALQFVNKMPMEPDKRIWGALL 567
Query: 406 NG-YAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILS 442
G + HG + A + + + GL P Y ILS
Sbjct: 568 AGCRSTHGSIEIAELV---AERLIGLDPQNTSYYVILS 602
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 114/446 (25%), Positives = 210/446 (47%), Gaps = 15/446 (3%)
Query: 62 QQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLR----SVVSWNSIISAHSRACLNDEA 117
Q++ F++ +Y + + + E PV +V+SW S IS+ + ++ A
Sbjct: 17 QRNVFIRNSAYSLYYRS---MFNTYAYYEEPVEFHGEKDNVISWTSKISSLVKQNQSELA 73
Query: 118 ILVLKEMWVLGLELSASTFVSV---VSGCSFRQGISMHC-CVYKLGLLNNEIPLANSVMS 173
+ + K M + + T +SV +SG + + C V KLG +E+ +A +++
Sbjct: 74 VGLFKMMLMTEQRPNHVTVLSVIRAISGLGLEDMMRVICGSVIKLG-FESEVSVATALIG 132
Query: 174 MYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVV 233
Y+ + + IF++ +V W+ ++ V G EAF + M+ V P+ V
Sbjct: 133 FYSDY-DMGIVWKIFNQTPIKDLVLWSAMVSACVKSGQYGEAFEIFRAMQYDGVEPNHVS 191
Query: 234 FLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVL 293
++++ CA VG L +H +K ++ + N LV MY KC + + + VFD +L
Sbjct: 192 IVSILPACANVGALLFGKEIHGFSIKKMFHPLTNVHNSLVDMYAKCRNFKASMLVFDQIL 251
Query: 294 EKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKE 353
EK + WT++I G + P EA F R+ + +E + + A + G
Sbjct: 252 EKDLISWTTIIRGCIENDCPREAFKAFSRMQFSCFGADETIVQDLIVAIIQADEHKFGIA 311
Query: 354 IEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGM 413
+++ NGL + + T+L+ M++K G + A VF+++ KD WSAMI+ +A
Sbjct: 312 FHGFLLKNGLLAFVSIGTALLQMYAKFGELESAIIVFDQLNKKDYISWSAMISVHAHSRH 371
Query: 414 GDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHY 473
AL F +MQ + +P+ + + S+L ACS G + G S ++ + G +
Sbjct: 372 PYNALETFKQMQSTDE-RPNEITFVSLLQACSLIGAQELGES-IQAHATKAGYLSNAFLS 429
Query: 474 LCLVDLLGRAGRFDLALKTIHEMPVE 499
L+DL + GR + +E+P +
Sbjct: 430 SALIDLYCKFGRINQGRAIFNEIPTK 455
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 107/224 (47%), Gaps = 12/224 (5%)
Query: 296 SVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIE 355
+V WTS I + AV LFK +L T RPN T+ + + A + LG + I
Sbjct: 53 NVISWTSKISSLVKQNQSELAVGLFKMMLMTEQRPNHVTVLSVIRAISGLGLEDMMRVIC 112
Query: 356 EYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGD 415
++ G ES V T+LI +S + ++F + P KDL +WSAM++ G
Sbjct: 113 GSVIKLGFESEVSVATALIGFYSDYD-MGIVWKIFNQTPIKDLVLWSAMVSACVKSGQYG 171
Query: 416 QALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIE----PSIE 471
+A +F MQ+ +G++P+ V SIL AC++ G L F K + F I+ P
Sbjct: 172 EAFEIFRAMQY-DGVEPNHVSIVSILPACANVG----ALLFGKEIH-GFSIKKMFHPLTN 225
Query: 472 HYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKH 515
+ LVD+ + F ++ ++ +E W ++ C+++
Sbjct: 226 VHNSLVDMYAKCRNFKASMLVFDQI-LEKDLISWTTIIRGCIEN 268
>gi|15217514|ref|NP_177305.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169720|sp|Q9C9I6.1|PP116_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g71490
gi|12323739|gb|AAG51835.1|AC016163_24 unknown protein; 40702-42747 [Arabidopsis thaliana]
gi|56381899|gb|AAV85668.1| At1g71490 [Arabidopsis thaliana]
gi|56790238|gb|AAW30036.1| At1g71490 [Arabidopsis thaliana]
gi|332197086|gb|AEE35207.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 681
Score = 325 bits (832), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 187/601 (31%), Positives = 304/601 (50%), Gaps = 54/601 (8%)
Query: 36 VLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYS------KCSDFVSSRKVLD 89
+L AC ++ + G +VH+H + G + + + L+ YS + + + +L
Sbjct: 49 LLSACVDVRAFLAGVQVHAHCISSGVEYHSVLVPKLVTFYSAFNLHNEAQSIIENSDILH 108
Query: 90 EMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCSFRQGI 149
+P WN +I+++++ L +E I K M G+ A T+ SV+ C +
Sbjct: 109 PLP--------WNVLIASYAKNELFEEVIAAYKRMVSKGIRPDAFTYPSVLKACGETLDV 160
Query: 150 SMHCCVY---KLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTII--- 203
+ V+ ++ + + + N+++SMY +F + AR +FD + E VSW +I
Sbjct: 161 AFGRVVHGSIEVSSYKSSLYVCNALISMYKRFRNMGIARRLFDRMFERDAVSWNAVINCY 220
Query: 204 --------------------------------GGYVNVGNVNEAFGLCNQMRRMSVTPDL 231
GG + GN A GL ++MR + D
Sbjct: 221 ASEGMWSEAFELFDKMWFSGVEVSVITWNIISGGCLQTGNYVGALGLISRMRNFPTSLDP 280
Query: 232 VVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDA 291
V + + C+ +G + L +H L + S Y+ D + N L++MY+KC DL A VF
Sbjct: 281 VAMIIGLKACSLIGAIRLGKEIHGLAIHSSYDGIDNVRNTLITMYSKCKDLRHALIVFRQ 340
Query: 292 VLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKG 351
E S+ W S+I GYAQL EA +L + +L +PN TLA+ L CA + +L G
Sbjct: 341 TEENSLCTWNSIISGYAQLNKSEEASHLLREMLVAGFQPNSITLASILPLCARIANLQHG 400
Query: 352 KEIEEYIVLNG-LESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAI 410
KE YI+ + + SL+ +++K G+I AK+V + + +D ++++I+GY
Sbjct: 401 KEFHCYILRRKCFKDYTMLWNSLVDVYAKSGKIVAAKQVSDLMSKRDEVTYTSLIDGYGN 460
Query: 411 HGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSI 470
G G AL LF +M G+KPD V ++LSACSHS +V +G F MQ +GI P +
Sbjct: 461 QGEGGVALALFKEMTR-SGIKPDHVTVVAVLSACSHSKLVHEGERLFMKMQCEYGIRPCL 519
Query: 471 EHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLT 530
+H+ C+VDL GRAG A IH MP + WA LL+AC H N ++G++AA+ LL
Sbjct: 520 QHFSCMVDLYGRAGFLAKAKDIIHNMPYKPSGATWATLLNACHIHGNTQIGKWAAEKLLE 579
Query: 531 LNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDR 590
+ P + G Y+L+AN++ +AG W + A R +M D + K+PG + ++ D +F GD
Sbjct: 580 MKPENPGYYVLIANMYAAAGSWSKLAEVRTIMRDLGVKKDPGCAWIDTDSGFSLFSVGDT 639
Query: 591 S 591
S
Sbjct: 640 S 640
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 117/458 (25%), Positives = 215/458 (46%), Gaps = 53/458 (11%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+I + N FEE ++ Y M+ G+ ++FT+P VLKAC + G+ VH +
Sbjct: 115 LIASYAKNELFEEVIAAYKRMVSKGIRPDAFTYPSVLKACGETLDVAFGRVVHGSIEVSS 174
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
++ +V LI MY + + +R++ D M R VSWN++I+ ++ + EA +
Sbjct: 175 YKSSLYVCNALISMYKRFRNMGIARRLFDRM--FERDAVSWNAVINCYASEGMWSEAFEL 232
Query: 121 LKEMWVLGLELSASTFVSVVSGCSFRQG----------------ISMHCCVYKLGL---- 160
+MW G+E+S T+ +++SG + G S+ +GL
Sbjct: 233 FDKMWFSGVEVSVITW-NIISGGCLQTGNYVGALGLISRMRNFPTSLDPVAMIIGLKACS 291
Query: 161 ------LNNEIP-------------LANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTT 201
L EI + N++++MY+K + A +F + E S+ +W +
Sbjct: 292 LIGAIRLGKEIHGLAIHSSYDGIDNVRNTLITMYSKCKDLRHALIVFRQTEENSLCTWNS 351
Query: 202 IIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSG 261
II GY + EA L +M P+ + +++ CA++ NL H +L+
Sbjct: 352 IISGYAQLNKSEEASHLLREMLVAGFQPNSITLASILPLCARIANLQHGKEFHCYILRRK 411
Query: 262 -YNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLF 320
+ + L N LV +Y K G + A++V D + ++ +TS+I GY G A+ LF
Sbjct: 412 CFKDYTMLWNSLVDVYAKSGKIVAAKQVSDLMSKRDEVTYTSLIDGYGNQGEGGVALALF 471
Query: 321 KRLLKTSVRPNEATLATTLSACAELGSLSKGKEIE-----EYIVLNGLESNRQVQTSLIH 375
K + ++ ++P+ T+ LSAC+ + +G+ + EY G+ Q + ++
Sbjct: 472 KEMTRSGIKPDHVTVVAVLSACSHSKLVHEGERLFMKMQCEY----GIRPCLQHFSCMVD 527
Query: 376 MFSKCGRINKAKEVFERVPDKDL-AVWSAMINGYAIHG 412
++ + G + KAK++ +P K A W+ ++N IHG
Sbjct: 528 LYGRAGFLAKAKDIIHNMPYKPSGATWATLLNACHIHG 565
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 94/407 (23%), Positives = 175/407 (42%), Gaps = 42/407 (10%)
Query: 127 LGLELSASTFVSVVSGCSFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARS 186
L L +AS + V +F G+ +H G+ + + L +++ Y+ F NEA+S
Sbjct: 41 LVLHSAASLLSACVDVRAFLAGVQVHAHCISSGVEYHSV-LVPKLVTFYSAFNLHNEAQS 99
Query: 187 IFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGN 246
I + + W +I Y E +M + PD + +++ C + +
Sbjct: 100 IIENSDILHPLPWNVLIASYAKNELFEEVIAAYKRMVSKGIRPDAFTYPSVLKACGETLD 159
Query: 247 LFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGG 306
+ +H + S Y + + N L+SMY + ++ +ARR+FD + E+ W ++I
Sbjct: 160 VAFGRVVHGSIEVSSYKSSLYVCNALISMYKRFRNMGIARRLFDRMFERDAVSWNAVINC 219
Query: 307 YAQLGYPSEAVNLFKRL-------------------------------------LKTSVR 329
YA G SEA LF ++ TS+
Sbjct: 220 YASEGMWSEAFELFDKMWFSGVEVSVITWNIISGGCLQTGNYVGALGLISRMRNFPTSLD 279
Query: 330 PNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEV 389
P + L AC+ +G++ GKEI + + + V+ +LI M+SKC + A V
Sbjct: 280 P--VAMIIGLKACSLIGAIRLGKEIHGLAIHSSYDGIDNVRNTLITMYSKCKDLRHALIV 337
Query: 390 FERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGM 449
F + + L W+++I+GYA ++A +L +M V G +P+++ SIL C+
Sbjct: 338 FRQTEENSLCTWNSIISGYAQLNKSEEASHLLREML-VAGFQPNSITLASILPLCARIAN 396
Query: 450 VDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEM 496
+ G F + + + LVD+ ++G+ +A K + ++
Sbjct: 397 LQHGKEFHCYILRRKCFKDYTMLWNSLVDVYAKSGKI-VAAKQVSDL 442
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 124/267 (46%), Gaps = 7/267 (2%)
Query: 203 IGGYVNVGNVNEAFGLCNQMRRMS---VTPDLVVF--LNLILGCAQVGNLFLALSMHSLL 257
+G + G++++AF + +R S V+ DLV+ +L+ C V + +H+
Sbjct: 10 LGHLASHGHLHDAFKTFSLLRLQSSSAVSDDLVLHSAASLLSACVDVRAFLAGVQVHAHC 69
Query: 258 LKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAV 317
+ SG L LV+ Y+ A+ + + W +I YA+ E +
Sbjct: 70 ISSGVEYHSVLVPKLVTFYSAFNLHNEAQSIIENSDILHPLPWNVLIASYAKNELFEEVI 129
Query: 318 NLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMF 377
+KR++ +RP+ T + L AC E ++ G+ + I ++ +S+ V +LI M+
Sbjct: 130 AAYKRMVSKGIRPDAFTYPSVLKACGETLDVAFGRVVHGSIEVSSYKSSLYVCNALISMY 189
Query: 378 SKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVY 437
+ + A+ +F+R+ ++D W+A+IN YA GM +A LF KM G++ + +
Sbjct: 190 KRFRNMGIARRLFDRMFERDAVSWNAVINCYASEGMWSEAFELFDKMW-FSGVEVSVITW 248
Query: 438 TSILSACSHSGMVDDGLSFFKSMQSNF 464
I C +G L M+ NF
Sbjct: 249 NIISGGCLQTGNYVGALGLISRMR-NF 274
>gi|356558562|ref|XP_003547574.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21300-like [Glycine max]
Length = 846
Score = 325 bits (832), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 199/621 (32%), Positives = 325/621 (52%), Gaps = 8/621 (1%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
M+ +G F + T+ M + NS T+ +L CA G +VH V+ G
Sbjct: 217 MLHGYVKSGDFNNAMGTFCGMRTSYSMVNSVTYTCILSICATRGKFCLGTQVHGLVIGSG 276
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F+ D V L+ MYSKC + +RK+ + MP V+WN +I+ + + DEA +
Sbjct: 277 FEFDPQVANTLVAMYSKCGNLFDARKLFNTMP--QTDTVTWNGLIAGYVQNGFTDEAAPL 334
Query: 121 LKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGLLNNEIP----LANSVMSMYA 176
M G++ + TF S + G HC ++ + +P L ++++ +Y
Sbjct: 335 FNAMISAGVKPDSVTFASFLPSI-LESGSLRHCKEVHSYIVRHRVPFDVYLKSALIDIYF 393
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K G V AR IF + + T +I GYV G +A + + + P+ + +
Sbjct: 394 KGGDVEMARKIFQQNTLVDVAVCTAMISGYVLHGLNIDAINTFRWLIQEGMVPNSLTMAS 453
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
++ CA + L L +H +LK N + + + MY KCG L+LA F + E
Sbjct: 454 VLPACAALAALKLGKELHCDILKKQLENIVNVGSAITDMYAKCGRLDLAYEFFRRMSETD 513
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEE 356
W SMI ++Q G P AV+LF+++ + + + +L++ LS+ A L +L GKE+
Sbjct: 514 SICWNSMISSFSQNGKPEMAVDLFRQMGMSGAKFDSVSLSSALSSAANLPALYYGKEMHG 573
Query: 357 YIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQ 416
Y++ N S+ V ++LI M+SKCG++ A+ VF + K+ W+++I Y HG +
Sbjct: 574 YVIRNAFSSDTFVASALIDMYSKCGKLALARCVFNLMAGKNEVSWNSIIAAYGNHGCARE 633
Query: 417 ALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCL 476
L+LF++M G+ PD V + I+SAC H+G+V +G+ +F M +GI +EHY C+
Sbjct: 634 CLDLFHEMLRA-GVHPDHVTFLVIISACGHAGLVGEGIHYFHCMTREYGIGARMEHYACM 692
Query: 477 VDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGST 536
VDL GRAGR A I MP A VW LL AC H NVEL + A+++LL L+P ++
Sbjct: 693 VDLYGRAGRLHEAFDAIKSMPFTPDAGVWGTLLGACRLHGNVELAKLASRHLLELDPKNS 752
Query: 537 GNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSV 596
G Y+L++N+ AG W R LM ++ + K PG+S ++++G +F A + +H SV
Sbjct: 753 GYYVLLSNVHADAGEWGSVLKVRRLMKEKGVQKIPGYSWIDVNGGTHMFSAAEGNHPESV 812
Query: 597 DIRKTLKELHIKLLEAGYIAE 617
+I L L ++L + GY+ +
Sbjct: 813 EIYLILNSLLLELRKQGYVPQ 833
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 133/428 (31%), Positives = 230/428 (53%), Gaps = 7/428 (1%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MIR G F+ L Y ML + V + +TFP V+KAC +N++ VH+ +G
Sbjct: 116 MIRGLYMLGWFDFALLFYFKMLGSNVSPDKYTFPYVIKACGGLNNVPLCMVVHNTARSLG 175
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F D FV + LI +Y+ +R+V DE+P R + WN ++ + ++ + A+
Sbjct: 176 FHVDLFVGSALIKLYADNGYICDARRVFDELP--QRDTILWNVMLHGYVKSGDFNNAMGT 233
Query: 121 LKEMWVLGLELSASTFVSVVSGCSFRQ----GISMHCCVYKLGLLNNEIPLANSVMSMYA 176
M +++ T+ ++S C+ R G +H V G + +AN++++MY+
Sbjct: 234 FCGMRTSYSMVNSVTYTCILSICATRGKFCLGTQVHGLVIGSGF-EFDPQVANTLVAMYS 292
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K G + +AR +F+ + +T V+W +I GYV G +EA L N M V PD V F +
Sbjct: 293 KCGNLFDARKLFNTMPQTDTVTWNGLIAGYVQNGFTDEAAPLFNAMISAGVKPDSVTFAS 352
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
+ + G+L +HS +++ + L + L+ +Y K GD+E+AR++F
Sbjct: 353 FLPSILESGSLRHCKEVHSYIVRHRVPFDVYLKSALIDIYFKGGDVEMARKIFQQNTLVD 412
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEE 356
V + T+MI GY G +A+N F+ L++ + PN T+A+ L ACA L +L GKE+
Sbjct: 413 VAVCTAMISGYVLHGLNIDAINTFRWLIQEGMVPNSLTMASVLPACAALAALKLGKELHC 472
Query: 357 YIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQ 416
I+ LE+ V +++ M++KCGR++ A E F R+ + D W++MI+ ++ +G +
Sbjct: 473 DILKKQLENIVNVGSAITDMYAKCGRLDLAYEFFRRMSETDSICWNSMISSFSQNGKPEM 532
Query: 417 ALNLFYKM 424
A++LF +M
Sbjct: 533 AVDLFRQM 540
Score = 188 bits (478), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 125/493 (25%), Positives = 244/493 (49%), Gaps = 18/493 (3%)
Query: 36 VLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRL 95
+ +AC++ + + ++VH+ ++ G + + ++ +Y C + + L
Sbjct: 50 LFRACSDASVVQQARQVHTQIIVGGMSDVCALSSRVLGLYVLCGRISDGGNLF--FGLEL 107
Query: 96 RSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCSFRQGISM---- 151
+ + WN +I D A+L +M + TF V+ C + +
Sbjct: 108 CNALPWNWMIRGLYMLGWFDFALLFYFKMLGSNVSPDKYTFPYVIKACGGLNNVPLCMVV 167
Query: 152 HCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGN 211
H LG + ++ + ++++ +YA G + +AR +FDE+ + + W ++ GYV G+
Sbjct: 168 HNTARSLGF-HVDLFVGSALIKLYADNGYICDARRVFDELPQRDTILWNVMLHGYVKSGD 226
Query: 212 VNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNL 271
N A G MR + V + ++ CA G L +H L++ SG+ + + N
Sbjct: 227 FNNAMGTFCGMRTSYSMVNSVTYTCILSICATRGKFCLGTQVHGLVIGSGFEFDPQVANT 286
Query: 272 LVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPN 331
LV+MY+KCG+L AR++F+ + + W +I GY Q G+ EA LF ++ V+P+
Sbjct: 287 LVAMYSKCGNLFDARKLFNTMPQTDTVTWNGLIAGYVQNGFTDEAAPLFNAMISAGVKPD 346
Query: 332 EATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFE 391
T A+ L + E GSL KE+ YIV + + + ++++LI ++ K G + A+++F+
Sbjct: 347 SVTFASFLPSILESGSLRHCKEVHSYIVRHRVPFDVYLKSALIDIYFKGGDVEMARKIFQ 406
Query: 392 RVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVD 451
+ D+AV +AMI+GY +HG+ A+N F + EG+ P+++ S+L AC+ +
Sbjct: 407 QNTLVDVAVCTAMISGYVLHGLNIDAINTFRWLIQ-EGMVPNSLTMASVLPACAALAALK 465
Query: 452 DGLSFFKSMQSNFGIEPSIEHYL----CLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAP 507
G K + + ++ +E+ + + D+ + GR DLA + M E + W
Sbjct: 466 LG----KELHCDI-LKKQLENIVNVGSAITDMYAKCGRLDLAYEFFRRMS-ETDSICWNS 519
Query: 508 LLSACMKHHNVEL 520
++S+ ++ E+
Sbjct: 520 MISSFSQNGKPEM 532
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/297 (22%), Positives = 132/297 (44%), Gaps = 7/297 (2%)
Query: 218 LCNQMRRMSVTPDLVV--FLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSM 275
+CN + T D + +L C+ + A +H+ ++ G ++ L + ++ +
Sbjct: 29 ICNNVMSKPETQDYLTTQLESLFRACSDASVVQQARQVHTQIIVGGMSDVCALSSRVLGL 88
Query: 276 YTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATL 335
Y CG + +F + + W MI G LG+ A+ + ++L ++V P++ T
Sbjct: 89 YVLCGRISDGGNLFFGLELCNALPWNWMIRGLYMLGWFDFALLFYFKMLGSNVSPDKYTF 148
Query: 336 ATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPD 395
+ AC L ++ + G + V ++LI +++ G I A+ VF+ +P
Sbjct: 149 PYVIKACGGLNNVPLCMVVHNTARSLGFHVDLFVGSALIKLYADNGYICDARRVFDELPQ 208
Query: 396 KDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLS 455
+D +W+ M++GY G + A+ F M+ + ++V YT ILS C+ G G
Sbjct: 209 RDTILWNVMLHGYVKSGDFNNAMGTFCGMRTSYSMV-NSVTYTCILSICATRGKFCLGTQ 267
Query: 456 FFK-SMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSA 511
+ S F +P + + LV + + G A K + MP + W L++
Sbjct: 268 VHGLVIGSGFEFDPQVAN--TLVAMYSKCGNLFDARKLFNTMP-QTDTVTWNGLIAG 321
>gi|147804706|emb|CAN64870.1| hypothetical protein VITISV_041329 [Vitis vinifera]
Length = 629
Score = 325 bits (832), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 173/533 (32%), Positives = 288/533 (54%), Gaps = 9/533 (1%)
Query: 92 PVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGC-SFRQGIS 150
P +V ++N+IIS +E ++M G+ TF + C +
Sbjct: 98 PTHEINVFAFNAIISGFITNGFPEEGFEFYQKMRNEGVMPDKFTFPCAIKACLDVLEIKK 157
Query: 151 MHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVG 210
+H ++K GL ++ + +++++ Y KFG + A+ F+E+ +V W ++ GY +G
Sbjct: 158 IHGLLFKFGL-ELDVFIGSALVNCYLKFGLMEHAQVAFEELPIRDVVLWNAMVNGYAQIG 216
Query: 211 NVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDN 270
+M SV P + A +G+L +H +K GY++ + N
Sbjct: 217 QFEMVLETFRRMNDESVVPSRFTVTGXLSVFAVMGDLNNGRIIHGFAMKMGYDSGVAVSN 276
Query: 271 LLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRP 330
L+ MY KC +E A +F+ + EK +F W S++ + Q G + L R+L ++P
Sbjct: 277 SLIDMYGKCKCIEDALEIFEMMREKDIFSWNSIVSVHEQCGDHDGTLRLLDRMLGAGIQP 336
Query: 331 NEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQ------VQTSLIHMFSKCGRIN 384
+ T+ T L AC+ L +L G+EI Y++++GL + + ++ ++I M++KCG +
Sbjct: 337 DLVTVTTVLPACSHLAALMHGREIHGYMIVSGLGKDGKDIDDVLLKNAVIDMYAKCGSMR 396
Query: 385 KAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSAC 444
A VFER+ +KD+A W+ MI GY +HG G++AL +F +M V+ LKPD V + +LSAC
Sbjct: 397 DAHLVFERMSNKDVASWNIMIMGYGMHGYGNEALEMFSRMCEVQ-LKPDEVTFVGVLSAC 455
Query: 445 SHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQV 504
SH+G V G +F M+S + + P+IEHY C++D+LGRAG+ D A + MP+E V
Sbjct: 456 SHAGFVSQGRNFLVQMKSKYDVAPTIEHYTCVIDMLGRAGQLDEAYELALTMPIEANPVV 515
Query: 505 WAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDD 564
W LL+AC H + L E AA+ + L P G+Y+LM+N++ + G ++E R M
Sbjct: 516 WRALLAACRLHKHAVLAEVAAQRVFELEPEHCGSYVLMSNVYGAVGRYEEVLEVRHTMRQ 575
Query: 565 RRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKELHIKLLEAGYIAE 617
+ + K PG S +E+ V VFV+ DR+H + I L L +L E GY+ +
Sbjct: 576 QNVRKTPGCSWIELKNGVHVFVSADRAHPEAXSIYAGLNSLTARLXEHGYVPD 628
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 115/434 (26%), Positives = 208/434 (47%), Gaps = 40/434 (9%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+I NG EE Y M GV + FTFP +KAC ++ I K++H + K G
Sbjct: 110 IISGFITNGFPEEGFEFYQKMRNEGVMPDKFTFPCAIKACLDVLEI---KKIHGLLFKFG 166
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRAC-------- 112
+ D F+ + L++ Y K ++ +E+P+ R VV WN++++ +++
Sbjct: 167 LELDVFIGSALVNCYLKFGLMEHAQVAFEELPI--RDVVLWNAMVNGYAQIGQFEMVLET 224
Query: 113 ---LNDEAILVLKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGLLNNEIPLAN 169
+NDE+++ + ++ V V G G +H K+G ++ + ++N
Sbjct: 225 FRRMNDESVVPSR------FTVTGXLSVFAVMG-DLNNGRIIHGFAMKMG-YDSGVAVSN 276
Query: 170 SVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTP 229
S++ MY K + +A IF+ + E I SW +I+ + G+ + L ++M + P
Sbjct: 277 SLIDMYGKCKCIEDALEIFEMMREKDIFSWNSIVSVHEQCGDHDGTLRLLDRMLGAGIQP 336
Query: 230 DLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDP------LDNLLVSMYTKCGDLE 283
DLV ++ C+ + L +H ++ SG + L N ++ MY KCG +
Sbjct: 337 DLVTVTTVLPACSHLAALMHGREIHGYMIVSGLGKDGKDIDDVLLKNAVIDMYAKCGSMR 396
Query: 284 LARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACA 343
A VF+ + K V W MI GY GY +EA+ +F R+ + ++P+E T LSAC+
Sbjct: 397 DAHLVFERMSNKDVASWNIMIMGYGMHGYGNEALEMFSRMCEVQLKPDEVTFVGVLSACS 456
Query: 344 ELGSLSKGKEI-----EEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVP-DKD 397
G +S+G+ +Y V +E T +I M + G++++A E+ +P + +
Sbjct: 457 HAGFVSQGRNFLVQMKSKYDVAPTIEH----YTCVIDMLGRAGQLDEAYELALTMPIEAN 512
Query: 398 LAVWSAMINGYAIH 411
VW A++ +H
Sbjct: 513 PVVWRALLAACRLH 526
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 84/258 (32%), Positives = 132/258 (51%), Gaps = 4/258 (1%)
Query: 189 DEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLF 248
D E ++ ++ II G++ G E F +MR V PD F I C V +
Sbjct: 97 DPTHEINVFAFNAIISGFITNGFPEEGFEFYQKMRNEGVMPDKFTFPCAIKACLDVLEI- 155
Query: 249 LALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYA 308
+H LL K G + + + LV+ Y K G +E A+ F+ + + V LW +M+ GYA
Sbjct: 156 --KKIHGLLFKFGLELDVFIGSALVNCYLKFGLMEHAQVAFEELPIRDVVLWNAMVNGYA 213
Query: 309 QLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQ 368
Q+G + F+R+ SV P+ T+ LS A +G L+ G+ I + + G +S
Sbjct: 214 QIGQFEMVLETFRRMNDESVVPSRFTVTGXLSVFAVMGDLNNGRIIHGFAMKMGYDSGVA 273
Query: 369 VQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVE 428
V SLI M+ KC I A E+FE + +KD+ W+++++ + G D L L +M
Sbjct: 274 VSNSLIDMYGKCKCIEDALEIFEMMREKDIFSWNSIVSVHEQCGDHDGTLRLLDRMLGA- 332
Query: 429 GLKPDAVVYTSILSACSH 446
G++PD V T++L ACSH
Sbjct: 333 GIQPDLVTVTTVLPACSH 350
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 106/221 (47%), Gaps = 6/221 (2%)
Query: 290 DAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLS 349
D E +VF + ++I G+ G+P E ++++ V P++ T + AC ++ +
Sbjct: 97 DPTHEINVFAFNAIISGFITNGFPEEGFEFYQKMRNEGVMPDKFTFPCAIKACLDVLEI- 155
Query: 350 KGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYA 409
K+I + GLE + + ++L++ + K G + A+ FE +P +D+ +W+AM+NGYA
Sbjct: 156 --KKIHGLLFKFGLELDVFIGSALVNCYLKFGLMEHAQVAFEELPIRDVVLWNAMVNGYA 213
Query: 410 IHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPS 469
G + L F +M E + P T LS + G +++G G +
Sbjct: 214 QIGQFEMVLETFRRMND-ESVVPSRFTVTGXLSVFAVMGDLNNG-RIIHGFAMKMGYDSG 271
Query: 470 IEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLS 510
+ L+D+ G+ + AL+ I EM E W ++S
Sbjct: 272 VAVSNSLIDMYGKCKCIEDALE-IFEMMREKDIFSWNSIVS 311
>gi|449449306|ref|XP_004142406.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Cucumis sativus]
Length = 782
Score = 325 bits (832), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 212/700 (30%), Positives = 336/700 (48%), Gaps = 111/700 (15%)
Query: 28 GNSFT----FPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVS 83
GNS T F +L+ I + G+ VH ++K G ++ L+ Y+K
Sbjct: 4 GNSPTSSEFFAHILQTSVRIKDPFAGRSVHCQIIKKGLHLGVYLMNNLMTFYAKTGSLRF 63
Query: 84 SRKVLDEMPVRLRSVVSWNSIISAHSRA---------------C---------------- 112
+ V DEMP L+S SWN++IS +++ C
Sbjct: 64 AHHVFDEMP--LKSTFSWNTLISGYAKQGNFEVSRRLLYEMPDCDPVSWTAIIVGYNQFG 121
Query: 113 LNDEAILVLKEMWVLGLELSASTFVSVVSGCSFRQ----GISMHCCVYKLGLLNNEIPLA 168
L D AI + +M + S T +V+S C+ Q G +H V KLGL + +P+A
Sbjct: 122 LFDNAIWMFAKMISERVPPSQFTVSNVLSSCAANQTLDIGRKIHSFVVKLGL-GSCVPVA 180
Query: 169 NSVMSMYAKFGKVNEARSIFD-------------------------------EIGETSIV 197
S+++MYAK G A+ +FD ++ + IV
Sbjct: 181 TSLLNMYAKCGDPVIAKVVFDRMTVKNISTWNALISLYMQSGQFELAASQFEKMPDRDIV 240
Query: 198 SWTTIIGGYVNVGNVNEAFGLCNQM-RRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSL 256
SW ++I GY G EA + ++M S+ PD +++ CA + L + +H+
Sbjct: 241 SWNSMISGYSQQGYNLEALVIFSKMLNEPSLKPDNFTLASILSACANLEKLNIGKQIHAY 300
Query: 257 LLKSGYNNEDPLDNLLVSMYTKCGDLELAR------------------------------ 286
+L++ + N L+SMY K G +E+AR
Sbjct: 301 ILRAETETSGAVGNALISMYAKSGGVEIARLIVEHNRTSNLNIIAFTSLLDGYTKLGNVK 360
Query: 287 ---RVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACA 343
+F+ + ++ V WT+MI GY Q G ++A+ LF+ ++ PN TLA LS +
Sbjct: 361 PAREIFNKLRDRDVVAWTAMIVGYVQNGLWNDALELFRLMVNEGPEPNSYTLAAMLSVSS 420
Query: 344 ELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPD--KDLAVW 401
L L GK+I + G S V +LI M++K G IN AK VF+ +P+ K++ W
Sbjct: 421 SLTILEHGKQIHASAIKAGESSTPSVTNALIAMYAKTGNINVAKRVFD-LPNGKKEIVSW 479
Query: 402 SAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQ 461
++MI A HG+G +A+NLF +M V G+KPD + Y +LSAC+H G+V+ G ++ M
Sbjct: 480 TSMIMALAQHGLGKEAINLFERMLSV-GMKPDHITYVGVLSACTHVGLVEQGRKYYNMMT 538
Query: 462 SNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELG 521
IEP++ HY C++DL GRAG A I MP+E W LL++C H N +L
Sbjct: 539 EVHEIEPTLSHYACMIDLYGRAGLLQEAYLFIESMPIEPDNIAWGSLLASCKIHKNADLA 598
Query: 522 EYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGS 581
+ AA+ LL ++PG++G Y+ +AN++++ G W+ AA R LM DR + KE G S + I
Sbjct: 599 KVAAERLLLIDPGNSGAYLALANVYSACGKWENAAQTRKLMKDRGVRKEKGISWIHIKNE 658
Query: 582 VQVFVAGDRSHHLSVDIRKTLKELHIKLLEAGYIAEADIV 621
V F D H +I K + E+ ++ + G+I + + V
Sbjct: 659 VHAFGVEDVIHPQKDEIYKLMAEIWEEIKKMGFIPDTESV 698
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 125/479 (26%), Positives = 218/479 (45%), Gaps = 71/479 (14%)
Query: 9 GSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQ 68
G F+ + ++ M+ V + FT VL +CA ++ G+++HS V+K+G V
Sbjct: 121 GLFDNAIWMFAKMISERVPPSQFTVSNVLSSCAANQTLDIGRKIHSFVVKLGLGSCVPVA 180
Query: 69 TGLIDMYSKCSDFVSSRKVLDEMPVR-----------------------------LRSVV 99
T L++MY+KC D V ++ V D M V+ R +V
Sbjct: 181 TSLLNMYAKCGDPVIAKVVFDRMTVKNISTWNALISLYMQSGQFELAASQFEKMPDRDIV 240
Query: 100 SWNSIISAHSRACLNDEAILVLKEMW-VLGLELSASTFVSVVSGCS----FRQGISMHCC 154
SWNS+IS +S+ N EA+++ +M L+ T S++S C+ G +H
Sbjct: 241 SWNSMISGYSQQGYNLEALVIFSKMLNEPSLKPDNFTLASILSACANLEKLNIGKQIHAY 300
Query: 155 VYKLGLLNNEIPLANSVMSMYA---------------------------------KFGKV 181
+ + + N+++SMYA K G V
Sbjct: 301 ILR-AETETSGAVGNALISMYAKSGGVEIARLIVEHNRTSNLNIIAFTSLLDGYTKLGNV 359
Query: 182 NEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGC 241
AR IF+++ + +V+WT +I GYV G N+A L M P+ ++
Sbjct: 360 KPAREIFNKLRDRDVVAWTAMIVGYVQNGLWNDALELFRLMVNEGPEPNSYTLAAMLSVS 419
Query: 242 AQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFD-AVLEKSVFLW 300
+ + L +H+ +K+G ++ + N L++MY K G++ +A+RVFD +K + W
Sbjct: 420 SSLTILEHGKQIHASAIKAGESSTPSVTNALIAMYAKTGNINVAKRVFDLPNGKKEIVSW 479
Query: 301 TSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIV- 359
TSMI AQ G EA+NLF+R+L ++P+ T LSAC +G + +G++ +
Sbjct: 480 TSMIMALAQHGLGKEAINLFERMLSVGMKPDHITYVGVLSACTHVGLVEQGRKYYNMMTE 539
Query: 360 LNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVP-DKDLAVWSAMINGYAIHGMGDQA 417
++ +E +I ++ + G + +A E +P + D W +++ IH D A
Sbjct: 540 VHEIEPTLSHYACMIDLYGRAGLLQEAYLFIESMPIEPDNIAWGSLLASCKIHKNADLA 598
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 72/298 (24%), Positives = 130/298 (43%), Gaps = 34/298 (11%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI NG + + L + M+ G NS+T +L +++ + GK++H+ +K G
Sbjct: 380 MIVGYVQNGLWNDALELFRLMVNEGPEPNSYTLAAMLSVSSSLTILEHGKQIHASAIKAG 439
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
V LI MY+K + +++V D +P + +VSW S+I A ++ L EAI +
Sbjct: 440 ESSTPSVTNALIAMYAKTGNINVAKRVFD-LPNGKKEIVSWTSMIMALAQHGLGKEAINL 498
Query: 121 LKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGK 180
+ M +G++ T+V V+S C+ + L Y +
Sbjct: 499 FERMLSVGMKPDHITYVGVLSACT-------------------HVGLVEQGRKYYNMMTE 539
Query: 181 VNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILG 240
V+E E ++ + +I Y G + EA+ + M + PD + + +L+
Sbjct: 540 VHEI--------EPTLSHYACMIDLYGRAGLLQEAYLF---IESMPIEPDNIAWGSLLAS 588
Query: 241 CAQVGNLFLA-LSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSV 297
C N LA ++ LLL N+ L L ++Y+ CG E A + + ++ V
Sbjct: 589 CKIHKNADLAKVAAERLLLIDPGNSGAYL--ALANVYSACGKWENAAQTRKLMKDRGV 644
>gi|3128231|gb|AAC26711.1| hypothetical protein [Arabidopsis thaliana]
gi|20197159|gb|AAM14947.1| hypothetical protein [Arabidopsis thaliana]
Length = 617
Score = 325 bits (832), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 196/564 (34%), Positives = 302/564 (53%), Gaps = 24/564 (4%)
Query: 33 FPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLD--E 90
F +LK C ++N + +++ + +L ++ F LI + DF S + E
Sbjct: 36 FLFLLKKCISVNQL---RQIQAQMLLHSVEKPNF----LIPKAVELGDFNYSSFLFSVTE 88
Query: 91 MPVRLRSVVSWNSIISAHSRACLNDEAILVL-KEMWVLGLELSASTFVSVVSGCSFRQ-- 147
P + S+N +I + + EA L L + M GL+ T+ V C+ +
Sbjct: 89 EP----NHYSFNYMIRGLTNTWNDHEAALSLYRRMKFSGLKPDKFTYNFVFIACAKLEEI 144
Query: 148 --GISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGG 205
G S+H ++K+GL ++ + +S++ MYAK G+V AR +FDEI E VSW ++I G
Sbjct: 145 GVGRSVHSSLFKVGL-ERDVHINHSLIMMYAKCGQVGYARKLFDEITERDTVSWNSMISG 203
Query: 206 YVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNE 265
Y G +A L +M PD ++++ C+ +G+L + + +
Sbjct: 204 YSEAGYAKDAMDLFRKMEEEGFEPDERTLVSMLGACSHLGDLRTGRLLEEMAITKKIGLS 263
Query: 266 DPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLK 325
L + L+SMY KCGDL+ ARRVF+ +++K WT+MI Y+Q G SEA LF + K
Sbjct: 264 TFLGSKLISMYGKCGDLDSARRVFNQMIKKDRVAWTAMITVYSQNGKSSEAFKLFFEMEK 323
Query: 326 TSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINK 385
T V P+ TL+T LSAC +G+L GK+IE + L+ N V T L+ M+ KCGR+ +
Sbjct: 324 TGVSPDAGTLSTVLSACGSVGALELGKQIETHASELSLQHNIYVATGLVDMYGKCGRVEE 383
Query: 386 AKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACS 445
A VFE +P K+ A W+AMI YA G +AL LF +M + P + + +LSAC
Sbjct: 384 ALRVFEAMPVKNEATWNAMITAYAHQGHAKEALLLFDRMS----VPPSDITFIGVLSACV 439
Query: 446 HSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVW 505
H+G+V G +F M S FG+ P IEHY ++DLL RAG D A + + P + +
Sbjct: 440 HAGLVHQGCRYFHEMSSMFGLVPKIEHYTNIIDLLSRAGMLDEAWEFMERFPGKPDEIML 499
Query: 506 APLLSACMKHHNVELGEYAAKNLLTLNPG-STGNYILMANLFTSAGMWKEAATARGLMDD 564
A +L AC K +V + E A + L+ + + GNY++ +N+ MW E+A R LM D
Sbjct: 500 AAILGACHKRKDVAIREKAMRMLMEMKEAKNAGNYVISSNVLADMKMWDESAKMRALMRD 559
Query: 565 RRLTKEPGWSQVEIDGSVQVFVAG 588
R + K PG S +EI+G + F+AG
Sbjct: 560 RGVVKTPGCSWIEIEGELMEFLAG 583
Score = 209 bits (533), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 143/427 (33%), Positives = 215/427 (50%), Gaps = 17/427 (3%)
Query: 1 MIRNSTNN-GSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKV 59
MIR TN E LS Y M +G+ + FT+ V ACA + I G+ VHS + KV
Sbjct: 98 MIRGLTNTWNDHEAALSLYRRMKFSGLKPDKFTYNFVFIACAKLEEIGVGRSVHSSLFKV 157
Query: 60 GFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAIL 119
G ++D + LI MY+KC +RK+ DE + R VSWNS+IS +S A +A+
Sbjct: 158 GLERDVHINHSLIMMYAKCGQVGYARKLFDE--ITERDTVSWNSMISGYSEAGYAKDAMD 215
Query: 120 VLKEMWVLGLELSASTFVSVVSGCS----FRQG--ISMHCCVYKLGLLNNEIPLANSVMS 173
+ ++M G E T VS++ CS R G + K+GL L + ++S
Sbjct: 216 LFRKMEEEGFEPDERTLVSMLGACSHLGDLRTGRLLEEMAITKKIGL---STFLGSKLIS 272
Query: 174 MYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVV 233
MY K G ++ AR +F+++ + V+WT +I Y G +EAF L +M + V+PD
Sbjct: 273 MYGKCGDLDSARRVFNQMIKKDRVAWTAMITVYSQNGKSSEAFKLFFEMEKTGVSPDAGT 332
Query: 234 FLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVL 293
++ C VG L L + + + + + LV MY KCG +E A RVF+A+
Sbjct: 333 LSTVLSACGSVGALELGKQIETHASELSLQHNIYVATGLVDMYGKCGRVEEALRVFEAMP 392
Query: 294 EKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKG-K 352
K+ W +MI YA G+ EA+ LF R+ SV P++ T LSAC G + +G +
Sbjct: 393 VKNEATWNAMITAYAHQGHAKEALLLFDRM---SVPPSDITFIGVLSACVHAGLVHQGCR 449
Query: 353 EIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHG 412
E + GL + T++I + S+ G +++A E ER P K + A I G A H
Sbjct: 450 YFHEMSSMFGLVPKIEHYTNIIDLLSRAGMLDEAWEFMERFPGKPDEIMLAAILG-ACHK 508
Query: 413 MGDQALN 419
D A+
Sbjct: 509 RKDVAIR 515
>gi|359487569|ref|XP_002277031.2| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Vitis vinifera]
Length = 703
Score = 325 bits (832), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 192/561 (34%), Positives = 314/561 (55%), Gaps = 33/561 (5%)
Query: 70 GLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGL 129
GLI Y K +RK D MP R +VVSW +++ + + L EA + +M
Sbjct: 83 GLISGYVKNRMVSEARKAFDTMPER--NVVSWTAMVRGYVQEGLVSEAETLFWQM----P 136
Query: 130 ELSASTFVSVVSGCSFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFD 189
E + ++ ++ G + I ++ + + + + N ++S Y + G++ EAR +FD
Sbjct: 137 EKNVVSWTVMLGGLIQVRRIDEARGLFDIMPVKDVVARTN-MISGYCQEGRLAEARELFD 195
Query: 190 EIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDL--VVFLNLILGCAQVGN- 246
E+ +++SWTT+I GYV G V+ A L V P+ V + +++G Q G
Sbjct: 196 EMPRRNVISWTTMISGYVQNGQVDVARKL------FEVMPEKNEVSWTAMLMGYTQGGRI 249
Query: 247 -----LFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWT 301
LF A+ + +++ N ++ + + G++ AR+VFD + EK W+
Sbjct: 250 EEASELFDAMPVKAVVAC----------NAMILGFGQNGEVAKARQVFDQIREKDDGTWS 299
Query: 302 SMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLN 361
+MI Y + G+ EA+NLF + + V+ N +L + LS CA L SL G+++ +V +
Sbjct: 300 AMIKVYERKGFEVEALNLFALMQREGVQSNFPSLISVLSVCASLASLDHGRQVHAELVKS 359
Query: 362 GLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLF 421
+S+ V + LI M+ KCG + KA+++F+R KD+ +W+++I GYA HG+ ++AL +F
Sbjct: 360 QFDSDVFVASVLITMYVKCGDLVKARQIFDRFSPKDIVMWNSIITGYAQHGLVEEALQVF 419
Query: 422 YKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLG 481
++M G+ D V + +LSACS++G V +GL F+SM+S + +EP EHY C+VDLLG
Sbjct: 420 HEMCS-SGMATDGVTFVGVLSACSYTGKVKEGLEIFESMKSKYLVEPKTEHYACMVDLLG 478
Query: 482 RAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYIL 541
RAG + A+ I +MPVE A +W LL AC H N+ L E AAK LL L P + G YIL
Sbjct: 479 RAGLVNDAMDLIQKMPVEADAIIWGALLGACRTHMNMNLAEVAAKKLLQLEPKNAGPYIL 538
Query: 542 MANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSV-DIRK 600
++N++ S G W + A R M ++++K PG S +E++ V +F G + H + I K
Sbjct: 539 LSNIYASKGRWGDVAELRRNMRVKKVSKSPGCSWIEVEKRVHMFTGGVSTKHPELSSIMK 598
Query: 601 TLKELHIKLLEAGYIAEADIV 621
L++L L EAGY ++ V
Sbjct: 599 MLEKLDGMLREAGYYPDSSFV 619
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 79/295 (26%), Positives = 139/295 (47%), Gaps = 58/295 (19%)
Query: 169 NSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQM-RRMSV 227
NS ++ YA+ G++ AR +FDE+ + IVSW +++ GY EA L ++M R +V
Sbjct: 20 NSQIARYARIGQIESARRVFDEMPDKGIVSWNSMVAGYFQNNRPREARYLFDKMPERNTV 79
Query: 228 TPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARR 287
+ N L+S Y K + AR+
Sbjct: 80 SW----------------------------------------NGLISGYVKNRMVSEARK 99
Query: 288 VFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGS 347
FD + E++V WT+M+ GY Q G SEA LF ++ + +V +S LG
Sbjct: 100 AFDTMPERNVVSWTAMVRGYVQEGLVSEAETLFWQMPEKNV----------VSWTVMLGG 149
Query: 348 LSKGKEIEEYIVLNGLESNRQV--QTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMI 405
L + + I+E L + + V +T++I + + GR+ +A+E+F+ +P +++ W+ MI
Sbjct: 150 LIQVRRIDEARGLFDIMPVKDVVARTNMISGYCQEGRLAEARELFDEMPRRNVISWTTMI 209
Query: 406 NGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSM 460
+GY +G D A LF M + + V +T++L + G +++ F +M
Sbjct: 210 SGYVQNGQVDVARKLFEVMP-----EKNEVSWTAMLMGYTQGGRIEEASELFDAM 259
Score = 101 bits (252), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 83/295 (28%), Positives = 131/295 (44%), Gaps = 46/295 (15%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI+ G E L+ ++ M + GV N + VL CA++ S+ G++VH+ ++K
Sbjct: 301 MIKVYERKGFEVEALNLFALMQREGVQSNFPSLISVLSVCASLASLDHGRQVHAELVKSQ 360
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F D FV + LI MY KC D V +R++ D + +V WNSII+ +++ L +EA+ V
Sbjct: 361 FDSDVFVASVLITMYVKCGDLVKARQIFDRFSP--KDIVMWNSIITGYAQHGLVEEALQV 418
Query: 121 LKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGK 180
EM G+ TFV V+S CS+ GK
Sbjct: 419 FHEMCSSGMATDGVTFVGVLSACSYT--------------------------------GK 446
Query: 181 VNEARSIFDEIGETSIVS-----WTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFL 235
V E IF+ + +V + ++ G VN+A L +++M V D +++
Sbjct: 447 VKEGLEIFESMKSKYLVEPKTEHYACMVDLLGRAGLVNDAMDL---IQKMPVEADAIIWG 503
Query: 236 NLILGCAQVGNLFLALSMHSLLLKSGYNNEDP---LDNLLVSMYTKCGDLELARR 287
L+ C N+ LA LL+ N P L N+ S + GD+ RR
Sbjct: 504 ALLGACRTHMNMNLAEVAAKKLLQLEPKNAGPYILLSNIYASK-GRWGDVAELRR 557
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 70/305 (22%), Positives = 128/305 (41%), Gaps = 25/305 (8%)
Query: 270 NLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVR 329
N ++ Y + G +E ARRVFD + +K + W SM+ GY Q P EA LF ++ +
Sbjct: 20 NSQIARYARIGQIESARRVFDEMPDKGIVSWNSMVAGYFQNNRPREARYLFDKMPER--- 76
Query: 330 PNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEV 389
N + +S + +S+ ++ + + E N T+++ + + G +++A+ +
Sbjct: 77 -NTVSWNGLISGYVKNRMVSEARKAFDTMP----ERNVVSWTAMVRGYVQEGLVSEAETL 131
Query: 390 FERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGM 449
F ++P+K++ W+ M+ G D+A LF M D V T+++S G
Sbjct: 132 FWQMPEKNVVSWTVMLGGLIQVRRIDEARGLFDIMP-----VKDVVARTNMISGYCQEGR 186
Query: 450 VDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLL 509
+ + F M ++ + ++ + G+ D+A K MP E W +L
Sbjct: 187 LAEARELFDEMPRR-----NVISWTTMISGYVQNGQVDVARKLFEVMP-EKNEVSWTAML 240
Query: 510 SACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTK 569
+ +E A L P + + G E A AR + D R
Sbjct: 241 MGYTQGGRIE----EASELFDAMP--VKAVVACNAMILGFGQNGEVAKARQVFDQIREKD 294
Query: 570 EPGWS 574
+ WS
Sbjct: 295 DGTWS 299
>gi|218196522|gb|EEC78949.1| hypothetical protein OsI_19398 [Oryza sativa Indica Group]
Length = 746
Score = 325 bits (832), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 173/470 (36%), Positives = 271/470 (57%), Gaps = 2/470 (0%)
Query: 152 HCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGN 211
H + K+GL N +S+++MY+ AR +FD I +VSW ++ Y VG
Sbjct: 175 HALLGKIGL-NGHDHTVHSLITMYSYLDDPGAARKVFDGIPTRDVVSWNAMMKAYGRVGM 233
Query: 212 VNEAFGLCNQM-RRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDN 270
E + M + +V P+ V ++ C G+L L + + + + +
Sbjct: 234 NGEVGRMFRDMVKEGTVAPNAVTVAVVLAACRDQGDLVLGRWVEEWSWSARMEMDSLVGS 293
Query: 271 LLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRP 330
L+ MY KCG++ ARRVFD +++K + W +MI GYAQ G +EA++LF + +RP
Sbjct: 294 ALLGMYEKCGEIAEARRVFDTIIDKDIVAWNAMITGYAQNGMSNEAISLFHSMRIAGMRP 353
Query: 331 NEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVF 390
++ TLA LSAC+ +G+L G E++ Y GL SN V T+L+ M++KCG ++KA EVF
Sbjct: 354 DKITLAGVLSACSAVGALELGSELDGYASRRGLYSNVYVGTALVDMYAKCGDLDKAIEVF 413
Query: 391 ERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMV 450
++P K++A W+A+I G A +G GD+A+ F M++ EGLKPD + + +LSAC H+G+V
Sbjct: 414 RKMPCKNVASWNALICGLAFNGRGDEAIQHFQLMRNEEGLKPDDITFIGVLSACVHAGLV 473
Query: 451 DDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLS 510
DG +F S+ F I P IEHY C+VDLL R+G + A I ++P +V A + LL+
Sbjct: 474 KDGKRWFNSLTPEFQIIPKIEHYSCMVDLLARSGHLEEAWDFIEKIPDKVDAVMLGALLA 533
Query: 511 ACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKE 570
AC K NVE+GE ++ L P ++ NY++ + ++ S+ ++A RGLM +R + K
Sbjct: 534 ACRKCKNVEIGERVINRIIQLEPTNSWNYVVSSKIYASSDRLDDSAKMRGLMRERGVNKT 593
Query: 571 PGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKELHIKLLEAGYIAEADI 620
PG S VE+ G V F AGD H + D+ + L L ++ GY+ D+
Sbjct: 594 PGCSWVEVSGKVLEFYAGDEPQHGADDMYQVLDLLVDEMRLEGYVPNLDV 643
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 94/280 (33%), Positives = 157/280 (56%), Gaps = 3/280 (1%)
Query: 221 QMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCG 280
M R ++ PD L+L A+ LA + H+LL K G N D + L++MY+
Sbjct: 142 HMLRSAIRPDSYTLPFLLLAAARYPAPSLARAAHALLGKIGLNGHDHTVHSLITMYSYLD 201
Query: 281 DLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKT-SVRPNEATLATTL 339
D AR+VFD + + V W +M+ Y ++G E +F+ ++K +V PN T+A L
Sbjct: 202 DPGAARKVFDGIPTRDVVSWNAMMKAYGRVGMNGEVGRMFRDMVKEGTVAPNAVTVAVVL 261
Query: 340 SACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLA 399
+AC + G L G+ +EE+ +E + V ++L+ M+ KCG I +A+ VF+ + DKD+
Sbjct: 262 AACRDQGDLVLGRWVEEWSWSARMEMDSLVGSALLGMYEKCGEIAEARRVFDTIIDKDIV 321
Query: 400 VWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKS 459
W+AMI GYA +GM ++A++LF+ M+ + G++PD + +LSACS G ++ G S
Sbjct: 322 AWNAMITGYAQNGMSNEAISLFHSMR-IAGMRPDKITLAGVLSACSAVGALELG-SELDG 379
Query: 460 MQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVE 499
S G+ ++ LVD+ + G D A++ +MP +
Sbjct: 380 YASRRGLYSNVYVGTALVDMYAKCGDLDKAIEVFRKMPCK 419
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 112/397 (28%), Positives = 196/397 (49%), Gaps = 16/397 (4%)
Query: 14 TLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLID 73
+L + ML++ + +S+T P +L A A + + H+ + K+G LI
Sbjct: 136 SLRLFLHMLRSAIRPDSYTLPFLLLAAARYPAPSLARAAHALLGKIGLNGHDHTVHSLIT 195
Query: 74 MYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLG-LELS 132
MYS D ++RKV D +P R VVSWN+++ A+ R +N E + ++M G + +
Sbjct: 196 MYSYLDDPGAARKVFDGIPT--RDVVSWNAMMKAYGRVGMNGEVGRMFRDMVKEGTVAPN 253
Query: 133 ASTFVSVVSGCSFRQGISMHCCVYKL---GLLNNEIPLANSVMSMYAKFGKVNEARSIFD 189
A T V++ C + + + V + + + + ++++ MY K G++ EAR +FD
Sbjct: 254 AVTVAVVLAACRDQGDLVLGRWVEEWSWSARMEMDSLVGSALLGMYEKCGEIAEARRVFD 313
Query: 190 EIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFL 249
I + IV+W +I GY G NEA L + MR + PD + ++ C+ VG L L
Sbjct: 314 TIIDKDIVAWNAMITGYAQNGMSNEAISLFHSMRIAGMRPDKITLAGVLSACSAVGALEL 373
Query: 250 ALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQ 309
+ + G + + LV MY KCGDL+ A VF + K+V W ++I G A
Sbjct: 374 GSELDGYASRRGLYSNVYVGTALVDMYAKCGDLDKAIEVFRKMPCKNVASWNALICGLAF 433
Query: 310 LGYPSEAVNLFKRLL-KTSVRPNEATLATTLSACAELGSLSKGKE-----IEEYIVLNGL 363
G EA+ F+ + + ++P++ T LSAC G + GK E+ ++ +
Sbjct: 434 NGRGDEAIQHFQLMRNEEGLKPDDITFIGVLSACVHAGLVKDGKRWFNSLTPEFQIIPKI 493
Query: 364 ESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAV 400
E + ++ + ++ G + +A + E++PDK AV
Sbjct: 494 EH----YSCMVDLLARSGHLEEAWDFIEKIPDKVDAV 526
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 72/144 (50%), Gaps = 3/144 (2%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI NG E +S + SM G+ + T VL AC+ + ++ G + + + G
Sbjct: 326 MITGYAQNGMSNEAISLFHSMRIAGMRPDKITLAGVLSACSAVGALELGSELDGYASRRG 385
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+ +V T L+DMY+KC D + +V +MP ++V SWN++I + DEAI
Sbjct: 386 LYSNVYVGTALVDMYAKCGDLDKAIEVFRKMPC--KNVASWNALICGLAFNGRGDEAIQH 443
Query: 121 LKEMW-VLGLELSASTFVSVVSGC 143
+ M GL+ TF+ V+S C
Sbjct: 444 FQLMRNEEGLKPDDITFIGVLSAC 467
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 66/136 (48%)
Query: 313 PSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTS 372
P ++ LF +L++++RP+ TL L A A + S + + GL + S
Sbjct: 133 PHTSLRLFLHMLRSAIRPDSYTLPFLLLAAARYPAPSLARAAHALLGKIGLNGHDHTVHS 192
Query: 373 LIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKP 432
LI M+S A++VF+ +P +D+ W+AM+ Y GM + +F M + P
Sbjct: 193 LITMYSYLDDPGAARKVFDGIPTRDVVSWNAMMKAYGRVGMNGEVGRMFRDMVKEGTVAP 252
Query: 433 DAVVYTSILSACSHSG 448
+AV +L+AC G
Sbjct: 253 NAVTVAVVLAACRDQG 268
>gi|359484341|ref|XP_002280538.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Vitis vinifera]
gi|297738773|emb|CBI28018.3| unnamed protein product [Vitis vinifera]
Length = 695
Score = 325 bits (832), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 194/630 (30%), Positives = 326/630 (51%), Gaps = 75/630 (11%)
Query: 28 GNSFTFPLVLKACANINSIWDGKRVHSHV-LKVGFQQDAFVQTGLIDMYSKCSDFVSSRK 86
NS ++ +L C N + KR+ +H+ L + D F+Q L+ +Y+K + +R
Sbjct: 20 ANSESYTRLLLQCVRSNDVVQAKRLQTHMDLHLYQPTDTFLQNRLLHLYAKSGNLSDARD 79
Query: 87 VLDEMPVRLRSVVSWNSIISAHS--------RACLND----------------------- 115
+ D+M R V SWN+++SA+S RA +
Sbjct: 80 LFDKMS--RRDVFSWNAMLSAYSKSGNVEDLRAVFDQMSVHDAVSYNTVIAGFSGNGCSS 137
Query: 116 EAILVLKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSV 171
+A+ M G E + T VSV+ CS ++G +H + L + + N++
Sbjct: 138 QALEFFVRMQEEGFESTDYTHVSVLHACSQLLDIKRGKQIHGRIVATSL-GESVFVWNAL 196
Query: 172 MSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDL 231
+MYAK G +++AR +FD + ++VSW ++I GY+ G L +M+ + PD
Sbjct: 197 TNMYAKCGALDQARWLFDRMVNKNVVSWNSMISGYLQNGQPETCTKLFCEMQSSGLMPDQ 256
Query: 232 VVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDA 291
V N++ S Y +CG ++ A + F
Sbjct: 257 VTISNIL-----------------------------------SAYFQCGYIDEACKTFRE 281
Query: 292 VLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKG 351
+ EK WT+M+ G AQ G +A+ LF+ +L +VRP+ T+++ +S+CA L SL +G
Sbjct: 282 IKEKDKVCWTTMMVGCAQNGKEEDALLLFREMLLENVRPDNFTISSVVSSCARLASLCQG 341
Query: 352 KEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIH 411
+ + V+ G++ + V ++L+ M+SKCG A VF+R+ +++ W++MI GYA +
Sbjct: 342 QAVHGKAVIFGVDHDLLVSSALVDMYSKCGETADAWIVFKRMLTRNVISWNSMILGYAQN 401
Query: 412 GMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIE 471
G +AL L+ +M H E LKPD + + +LSAC H+G+V+ G +F S+ G+ P+ +
Sbjct: 402 GKDLEALALYEEMLH-ENLKPDNITFVGVLSACMHAGLVERGQGYFYSISKIHGMNPTFD 460
Query: 472 HYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTL 531
HY C+++LLGRAG D A+ I M E +W+ LLS C + +V GE AA++L L
Sbjct: 461 HYSCMINLLGRAGYMDKAVDLIKSMTFEPNCLIWSTLLSVCRINCDVNNGEMAARHLFEL 520
Query: 532 NPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRS 591
+P + G YI+++N++ + G WK+ A R LM + ++ K +S +EID V FVA DR+
Sbjct: 521 DPHNAGPYIMLSNIYAACGRWKDVAAVRSLMKNNKIKKFAAYSWIEIDNQVHKFVAEDRT 580
Query: 592 HHLSVDIRKTLKELHIKLLEAGYIAEADIV 621
H + I + L L KL E+G+ + ++V
Sbjct: 581 HSETEQIYEELNRLIKKLQESGFTPDTNLV 610
Score = 155 bits (392), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 123/482 (25%), Positives = 220/482 (45%), Gaps = 72/482 (14%)
Query: 6 TNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDA 65
+ NG + L + M + G +T VL AC+ + I GK++H ++ +
Sbjct: 131 SGNGCSSQALEFFVRMQEEGFESTDYTHVSVLHACSQLLDIKRGKQIHGRIVATSLGESV 190
Query: 66 FVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMW 125
FV L +MY+KC +R + D M ++VVSWNS+IS + + N + K
Sbjct: 191 FVWNALTNMYAKCGALDQARWLFDRMVN--KNVVSWNSMISGYLQ---NGQPETCTK--- 242
Query: 126 VLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEAR 185
L E+ +S GL+ +++ ++N ++S Y + G ++EA
Sbjct: 243 -LFCEMQSS------------------------GLMPDQVTISN-ILSAYFQCGYIDEAC 276
Query: 186 SIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVG 245
F EI E V WTT++ G G +A L +M +V PD +++ CA++
Sbjct: 277 KTFREIKEKDKVCWTTMMVGCAQNGKEEDALLLFREMLLENVRPDNFTISSVVSSCARLA 336
Query: 246 NLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIG 305
+L ++H + G +++ + + LV MY+KCG+ A VF +L ++V W SMI
Sbjct: 337 SLCQGQAVHGKAVIFGVDHDLLVSSALVDMYSKCGETADAWIVFKRMLTRNVISWNSMIL 396
Query: 306 GYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLES 365
GYAQ G EA+ L++ +L +++P+ T LSAC G + +G+
Sbjct: 397 GYAQNGKDLEALALYEEMLHENLKPDNITFVGVLSACMHAGLVERGQG------------ 444
Query: 366 NRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQ 425
F +I+ F+ +S MIN G D+A++L M
Sbjct: 445 ----------YFYSISKIHGMNPTFDH--------YSCMINLLGRAGYMDKAVDLIKSMT 486
Query: 426 HVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEP-SIEHYLCLVDLLGRAG 484
+P+ ++++++LS C + V++G + + F ++P + Y+ L ++ G
Sbjct: 487 ----FEPNCLIWSTLLSVCRINCDVNNGEMAARHL---FELDPHNAGPYIMLSNIYAACG 539
Query: 485 RF 486
R+
Sbjct: 540 RW 541
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 102/208 (49%), Gaps = 7/208 (3%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
M+ NG E+ L + ML V ++FT V+ +CA + S+ G+ VH + G
Sbjct: 293 MMVGCAQNGKEEDALLLFREMLLENVRPDNFTISSVVSSCARLASLCQGQAVHGKAVIFG 352
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
D V + L+DMYSKC + + V M R+V+SWNS+I +++ + EA+ +
Sbjct: 353 VDHDLLVSSALVDMYSKCGETADAWIVFKRMLT--RNVISWNSMILGYAQNGKDLEALAL 410
Query: 121 LKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
+EM L+ TFV V+S C +G + K+ +N + ++++
Sbjct: 411 YEEMLHENLKPDNITFVGVLSACMHAGLVERGQGYFYSISKIHGMNPTFDHYSCMINLLG 470
Query: 177 KFGKVNEARSIFDEIG-ETSIVSWTTII 203
+ G +++A + + E + + W+T++
Sbjct: 471 RAGYMDKAVDLIKSMTFEPNCLIWSTLL 498
>gi|224137486|ref|XP_002327138.1| predicted protein [Populus trichocarpa]
gi|222835453|gb|EEE73888.1| predicted protein [Populus trichocarpa]
Length = 601
Score = 324 bits (831), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 186/578 (32%), Positives = 319/578 (55%), Gaps = 6/578 (1%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+I + NG + L + +L+ G T ++ +C ++ G+ +H +K G
Sbjct: 12 LICGCSRNGYDVDALEIFVQLLREGFSPLQTTLVGLVPSCGRREFVFQGRSIHGFGIKTG 71
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
D+ V+ L MY+K D ++ + +E+ +SVVSWN++I A++ +E++LV
Sbjct: 72 IDLDSQVKNALTYMYAKSGDLEAAELLFEEL--EDKSVVSWNTMIGAYAGNGFFNESMLV 129
Query: 121 LKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGK 180
K M +E++ T +S++ + I HC K GL+NN + S++ +YAK G
Sbjct: 130 FKRMVEQKVEVNPVTIMSLLPANISPELI--HCYAIKTGLINNG-SVVTSLVCLYAKCGS 186
Query: 181 VNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILG 240
A ++ + ++VS T II Y GN++ ++M+++ + D V ++++ G
Sbjct: 187 TELAELLYWSFPQKNLVSLTAIISSYAEKGNMDLVVECFSRMQQLDMKLDSVAMVSILHG 246
Query: 241 CAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLW 300
++ + +++H LK+G + + + N L+SMY K D+E A +F + EK + W
Sbjct: 247 ITDPSHMSIGIALHGYALKNGLDTHNLVSNGLISMYFKFNDIEAAISLFYEMPEKPLISW 306
Query: 301 TSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVL 360
S+I G Q G S+A+ F ++ + P+ T+A+ L+ C++LG L G+ + YI+
Sbjct: 307 NSVISGCVQAGRASDAMKFFCQMKMFGLSPDTITVASLLTGCSQLGYLRLGERLHNYILR 366
Query: 361 NGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNL 420
N LE V TSLI M++KCG I A+ VF+ + + +A W+ MI+GY+ +G+ ALN
Sbjct: 367 NNLEVEDFVGTSLIDMYTKCGSILLAERVFKSIREPCVATWNTMISGYSWYGLEHNALNC 426
Query: 421 FYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLL 480
+ KM+ +GL+PD + + +L+AC H G++ +G F+ M FG+ P+++H C+V LL
Sbjct: 427 YSKMRE-QGLEPDRITFLGVLAACIHGGLLHEGKKHFQIMTEEFGMVPNLQHCACMVGLL 485
Query: 481 GRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYI 540
GRAG F+ AL I M E + VW LL+AC H ++LGE AK L L+ + G Y+
Sbjct: 486 GRAGLFEEALLFIKNMESEPDSAVWGALLNACCIHQEIKLGECLAKKLYLLDYKNCGLYV 545
Query: 541 LMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEI 578
LM+NL+ + W +AA R +M D G SQ+E+
Sbjct: 546 LMSNLYAATNRWNDAAKMREIMKDIGGDGTSGVSQIEV 583
Score = 155 bits (392), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 115/409 (28%), Positives = 201/409 (49%), Gaps = 20/409 (4%)
Query: 96 RSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCSFR----QGISM 151
R +VSWN++I SR + +A+ + ++ G +T V +V C R QG S+
Sbjct: 4 RDIVSWNALICGCSRNGYDVDALEIFVQLLREGFSPLQTTLVGLVPSCGRREFVFQGRSI 63
Query: 152 HCCVYKLGL-LNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVG 210
H K G+ L++++ N++ MYAK G + A +F+E+ + S+VSW T+IG Y G
Sbjct: 64 HGFGIKTGIDLDSQVK--NALTYMYAKSGDLEAAELLFEELEDKSVVSWNTMIGAYAGNG 121
Query: 211 NVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDN 270
NE+ + +M V + V ++L+ N+ L +H +K+G N +
Sbjct: 122 FFNESMLVFKRMVEQKVEVNPVTIMSLL-----PANISPEL-IHCYAIKTGLINNGSVVT 175
Query: 271 LLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRP 330
LV +Y KCG ELA ++ + +K++ T++I YA+ G V F R+ + ++
Sbjct: 176 SLVCLYAKCGSTELAELLYWSFPQKNLVSLTAIISSYAEKGNMDLVVECFSRMQQLDMKL 235
Query: 331 NEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVF 390
+ + + L + +S G + Y + NGL+++ V LI M+ K I A +F
Sbjct: 236 DSVAMVSILHGITDPSHMSIGIALHGYALKNGLDTHNLVSNGLISMYFKFNDIEAAISLF 295
Query: 391 ERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMV 450
+P+K L W+++I+G G A+ F +M+ GL PD + S+L+ CS G +
Sbjct: 296 YEMPEKPLISWNSVISGCVQAGRASDAMKFFCQMKMF-GLSPDTITVASLLTGCSQLGYL 354
Query: 451 DDGLSFFKS-MQSNFGIEPSIEHYLCLVDLLGRAGRFDLA---LKTIHE 495
G +++N +E + L+D+ + G LA K+I E
Sbjct: 355 RLGERLHNYILRNNLEVEDFVG--TSLIDMYTKCGSILLAERVFKSIRE 401
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 94/325 (28%), Positives = 163/325 (50%), Gaps = 15/325 (4%)
Query: 193 ETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALS 252
+ IVSW +I G G +A + Q+ R +P + L+ C + +F S
Sbjct: 3 DRDIVSWNALICGCSRNGYDVDALEIFVQLLREGFSPLQTTLVGLVPSCGRREFVFQGRS 62
Query: 253 MHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGY 312
+H +K+G + + + N L MY K GDLE A +F+ + +KSV W +MIG YA G+
Sbjct: 63 IHGFGIKTGIDLDSQVKNALTYMYAKSGDLEAAELLFEELEDKSVVSWNTMIGAYAGNGF 122
Query: 313 PSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTS 372
+E++ +FKR+++ V N T+ + L A ++S + I Y + GL +N V TS
Sbjct: 123 FNESMLVFKRMVEQKVEVNPVTIMSLLPA-----NISP-ELIHCYAIKTGLINNGSVVTS 176
Query: 373 LIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKP 432
L+ +++KCG A+ ++ P K+L +A+I+ YA G D + F +MQ ++ +K
Sbjct: 177 LVCLYAKCGSTELAELLYWSFPQKNLVSLTAIISSYAEKGNMDLVVECFSRMQQLD-MKL 235
Query: 433 DAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLC---LVDLLGRAGRFDLA 489
D+V SIL + + G++ N G++ H L L+ + + + A
Sbjct: 236 DSVAMVSILHGITDPSHMSIGIALHGYALKN-GLDT---HNLVSNGLISMYFKFNDIEAA 291
Query: 490 LKTIHEMPVEVQAQVWAPLLSACMK 514
+ +EMP E W ++S C++
Sbjct: 292 ISLFYEMP-EKPLISWNSVISGCVQ 315
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 81/139 (58%), Gaps = 2/139 (1%)
Query: 292 VLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKG 351
+L++ + W ++I G ++ GY +A+ +F +LL+ P + TL + +C + +G
Sbjct: 1 MLDRDIVSWNALICGCSRNGYDVDALEIFVQLLREGFSPLQTTLVGLVPSCGRREFVFQG 60
Query: 352 KEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIH 411
+ I + + G++ + QV+ +L +M++K G + A+ +FE + DK + W+ MI YA +
Sbjct: 61 RSIHGFGIKTGIDLDSQVKNALTYMYAKSGDLEAAELLFEELEDKSVVSWNTMIGAYAGN 120
Query: 412 GMGDQALNLFYKM--QHVE 428
G ++++ +F +M Q VE
Sbjct: 121 GFFNESMLVFKRMVEQKVE 139
>gi|15227144|ref|NP_179798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206010|sp|Q9SHZ8.1|PP168_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g22070
gi|4587589|gb|AAD25817.1| hypothetical protein [Arabidopsis thaliana]
gi|330252165|gb|AEC07259.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 786
Score = 324 bits (831), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 212/684 (30%), Positives = 343/684 (50%), Gaps = 105/684 (15%)
Query: 35 LVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVR 94
L+ K+ N + + VH V+K G ++ L+++YSK + +RK+ DEMP
Sbjct: 19 LLQKSVNKSNGRFTAQLVHCRVIKSGLMFSVYLMNNLMNVYSKTGYALHARKLFDEMP-- 76
Query: 95 LRSVVSWNSIISAHSRACLND-------------------------------EAILVLKE 123
LR+ SWN+++SA+S+ D +AI V+ +
Sbjct: 77 LRTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGD 136
Query: 124 MWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFG 179
M G+E + T +V++ + G +H + KLGL N + ++NS+++MYAK G
Sbjct: 137 MVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGN-VSVSNSLLNMYAKCG 195
Query: 180 KVNEARSIFD-------------------------------EIGETSIVSWTTIIGGYVN 208
A+ +FD ++ E IV+W ++I G+
Sbjct: 196 DPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQ 255
Query: 209 VGNVNEAFGLCNQMRRMS-VTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDP 267
G A + ++M R S ++PD +++ CA + L + +HS ++ +G++
Sbjct: 256 RGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGI 315
Query: 268 LDNLLVSMYTKCGDLELARR---------------------------------VFDAVLE 294
+ N L+SMY++CG +E ARR +F ++ +
Sbjct: 316 VLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKD 375
Query: 295 KSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEI 354
+ V WT+MI GY Q G EA+NLF+ ++ RPN TLA LS + L SLS GK+I
Sbjct: 376 RDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQI 435
Query: 355 EEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVP-DKDLAVWSAMINGYAIHGM 413
V +G + V +LI M++K G I A F+ + ++D W++MI A HG
Sbjct: 436 HGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGH 495
Query: 414 GDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHY 473
++AL LF M +EGL+PD + Y + SAC+H+G+V+ G +F M+ I P++ HY
Sbjct: 496 AEEALELFETML-MEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHY 554
Query: 474 LCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNP 533
C+VDL GRAG A + I +MP+E W LLSAC H N++LG+ AA+ LL L P
Sbjct: 555 ACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVHKNIDLGKVAAERLLLLEP 614
Query: 534 GSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHH 593
++G Y +ANL+++ G W+EAA R M D R+ KE G+S +E+ V VF D +H
Sbjct: 615 ENSGAYSALANLYSACGKWEEAAKIRKSMKDGRVKKEQGFSWIEVKHKVHVFGVEDGTHP 674
Query: 594 LSVDIRKTLKELHIKLLEAGYIAE 617
+I T+K++ ++ + GY+ +
Sbjct: 675 EKNEIYMTMKKIWDEIKKMGYVPD 698
Score = 158 bits (399), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 122/486 (25%), Positives = 224/486 (46%), Gaps = 81/486 (16%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI N G + + + M++ G+ FT VL + A + GK+VHS ++K+G
Sbjct: 117 MIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLG 176
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVR-------------------------- 94
+ + V L++MY+KC D + ++ V D M VR
Sbjct: 177 LRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFE 236
Query: 95 ---LRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFV--SVVSGCSFRQ-- 147
R +V+WNS+IS ++ + A+ + +M L LS F SV+S C+ +
Sbjct: 237 QMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSL-LSPDRFTLASVLSACANLEKL 295
Query: 148 --GISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIG--ETSIVSWTTII 203
G +H + G + I L N+++SMY++ G V AR + ++ G + I +T ++
Sbjct: 296 CIGKQIHSHIVTTGFDISGIVL-NALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALL 354
Query: 204 GGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVG------NLFLAL------ 251
GY+ +G++N+A + ++ D+V + +I+G Q G NLF ++
Sbjct: 355 DGYIKLGDMNQAKNIFVSLK----DRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQR 410
Query: 252 -----------------------SMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRV 288
+H +KSG + N L++MY K G++ A R
Sbjct: 411 PNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRA 470
Query: 289 FDAV-LEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGS 347
FD + E+ WTSMI AQ G+ EA+ LF+ +L +RP+ T SAC G
Sbjct: 471 FDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGL 530
Query: 348 LSKGKEIEEYIV-LNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVP-DKDLAVWSAMI 405
+++G++ + + ++ + ++ +F + G + +A+E E++P + D+ W +++
Sbjct: 531 VNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLL 590
Query: 406 NGYAIH 411
+ +H
Sbjct: 591 SACRVH 596
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 129/277 (46%), Gaps = 48/277 (17%)
Query: 218 LCNQMRRMSVTPDLVVFLNLILGCAQV--GNLFLALSMHSLL---LKSGYN-------NE 265
LC + + SV F ++ C + G +F M++L+ K+GY +E
Sbjct: 15 LCTNLLQKSVNKSNGRFTAQLVHCRVIKSGLMFSVYLMNNLMNVYSKTGYALHARKLFDE 74
Query: 266 DPLD-----NLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLF 320
PL N ++S Y+K GD++ FD + ++ WT+MI GY +G +A+ +
Sbjct: 75 MPLRTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVM 134
Query: 321 KRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKC 380
++K + P + TL L++ A + GK++ +IV GL N V SL++M++KC
Sbjct: 135 GDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKC 194
Query: 381 GRINKAKEVFER-------------------------------VPDKDLAVWSAMINGYA 409
G AK VF+R + ++D+ W++MI+G+
Sbjct: 195 GDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFN 254
Query: 410 IHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSH 446
G +AL++F KM L PD S+LSAC++
Sbjct: 255 QRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACAN 291
>gi|115463111|ref|NP_001055155.1| Os05g0307200 [Oryza sativa Japonica Group]
gi|113578706|dbj|BAF17069.1| Os05g0307200 [Oryza sativa Japonica Group]
Length = 767
Score = 324 bits (831), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 173/470 (36%), Positives = 272/470 (57%), Gaps = 2/470 (0%)
Query: 152 HCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGN 211
H + K+GL N +S+++MY+ AR +FD I +VSW ++ Y VG
Sbjct: 175 HALLGKIGL-NGHDHTVHSLITMYSYLDDPGAARKVFDGIPTRDVVSWNAMMKAYGRVGM 233
Query: 212 VNEAFGLCNQM-RRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDN 270
E + M + +V P++V ++ C G+L L + + + + +
Sbjct: 234 NGEVGRMFRDMVKEGTVAPNVVTVAVVLAACRDQGDLVLGRWVEEWSWSARMEMDSLVGS 293
Query: 271 LLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRP 330
L+ MY KCG++ ARRVFD +++K + W +MI GYAQ G +EA++LF + +RP
Sbjct: 294 ALLGMYEKCGEIAEARRVFDTIIDKDIVAWNAMITGYAQNGMSNEAISLFHSMRIAGMRP 353
Query: 331 NEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVF 390
++ TLA LSAC+ +G+L G E++ Y GL SN V T+L+ M++KCG ++KA EVF
Sbjct: 354 DKITLAGVLSACSAVGALELGSELDGYASRRGLYSNVYVGTALVDMYAKCGDLDKAIEVF 413
Query: 391 ERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMV 450
++P K++A W+A+I G A +G GD+A+ F M++ EGLKPD + + +LSAC H+G+V
Sbjct: 414 RKMPCKNVASWNALICGLAFNGRGDEAIQHFQLMRNEEGLKPDDITFIGVLSACVHAGLV 473
Query: 451 DDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLS 510
DG +F S+ F I P IEHY C+VDLL R+G + A I ++P +V A + LL+
Sbjct: 474 KDGKRWFNSLTPEFQIIPKIEHYSCMVDLLARSGHLEEAWDFIEKIPDKVDAVMLGALLA 533
Query: 511 ACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKE 570
AC K NVE+GE ++ L P ++ NY++ + ++ S+ ++A RGLM +R + K
Sbjct: 534 ACRKCKNVEIGERVINRIIQLEPTNSWNYVVSSKIYASSDRLDDSAKMRGLMRERGVNKT 593
Query: 571 PGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKELHIKLLEAGYIAEADI 620
PG S VE+ G V F AGD H + D+ + L L ++ GY+ D+
Sbjct: 594 PGCSWVEVSGKVLEFYAGDEPQHGADDMYQVLDLLVDEMRLEGYVPNLDV 643
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 94/280 (33%), Positives = 157/280 (56%), Gaps = 3/280 (1%)
Query: 221 QMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCG 280
M R ++ PD L+L A+ LA + H+LL K G N D + L++MY+
Sbjct: 142 HMLRSAIRPDSYTLPFLLLAAARYPAPSLARAAHALLGKIGLNGHDHTVHSLITMYSYLD 201
Query: 281 DLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKT-SVRPNEATLATTL 339
D AR+VFD + + V W +M+ Y ++G E +F+ ++K +V PN T+A L
Sbjct: 202 DPGAARKVFDGIPTRDVVSWNAMMKAYGRVGMNGEVGRMFRDMVKEGTVAPNVVTVAVVL 261
Query: 340 SACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLA 399
+AC + G L G+ +EE+ +E + V ++L+ M+ KCG I +A+ VF+ + DKD+
Sbjct: 262 AACRDQGDLVLGRWVEEWSWSARMEMDSLVGSALLGMYEKCGEIAEARRVFDTIIDKDIV 321
Query: 400 VWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKS 459
W+AMI GYA +GM ++A++LF+ M+ + G++PD + +LSACS G ++ G S
Sbjct: 322 AWNAMITGYAQNGMSNEAISLFHSMR-IAGMRPDKITLAGVLSACSAVGALELG-SELDG 379
Query: 460 MQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVE 499
S G+ ++ LVD+ + G D A++ +MP +
Sbjct: 380 YASRRGLYSNVYVGTALVDMYAKCGDLDKAIEVFRKMPCK 419
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 111/397 (27%), Positives = 195/397 (49%), Gaps = 16/397 (4%)
Query: 14 TLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLID 73
+L + ML++ + +S+T P +L A A + + H+ + K+G LI
Sbjct: 136 SLRLFLHMLRSAIRPDSYTLPFLLLAAARYPAPSLARAAHALLGKIGLNGHDHTVHSLIT 195
Query: 74 MYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLG-LELS 132
MYS D ++RKV D +P R VVSWN+++ A+ R +N E + ++M G + +
Sbjct: 196 MYSYLDDPGAARKVFDGIPT--RDVVSWNAMMKAYGRVGMNGEVGRMFRDMVKEGTVAPN 253
Query: 133 ASTFVSVVSGCSFRQGISMHCCVYKL---GLLNNEIPLANSVMSMYAKFGKVNEARSIFD 189
T V++ C + + + V + + + + ++++ MY K G++ EAR +FD
Sbjct: 254 VVTVAVVLAACRDQGDLVLGRWVEEWSWSARMEMDSLVGSALLGMYEKCGEIAEARRVFD 313
Query: 190 EIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFL 249
I + IV+W +I GY G NEA L + MR + PD + ++ C+ VG L L
Sbjct: 314 TIIDKDIVAWNAMITGYAQNGMSNEAISLFHSMRIAGMRPDKITLAGVLSACSAVGALEL 373
Query: 250 ALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQ 309
+ + G + + LV MY KCGDL+ A VF + K+V W ++I G A
Sbjct: 374 GSELDGYASRRGLYSNVYVGTALVDMYAKCGDLDKAIEVFRKMPCKNVASWNALICGLAF 433
Query: 310 LGYPSEAVNLFKRLL-KTSVRPNEATLATTLSACAELGSLSKGKE-----IEEYIVLNGL 363
G EA+ F+ + + ++P++ T LSAC G + GK E+ ++ +
Sbjct: 434 NGRGDEAIQHFQLMRNEEGLKPDDITFIGVLSACVHAGLVKDGKRWFNSLTPEFQIIPKI 493
Query: 364 ESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAV 400
E + ++ + ++ G + +A + E++PDK AV
Sbjct: 494 EH----YSCMVDLLARSGHLEEAWDFIEKIPDKVDAV 526
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 72/144 (50%), Gaps = 3/144 (2%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI NG E +S + SM G+ + T VL AC+ + ++ G + + + G
Sbjct: 326 MITGYAQNGMSNEAISLFHSMRIAGMRPDKITLAGVLSACSAVGALELGSELDGYASRRG 385
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+ +V T L+DMY+KC D + +V +MP ++V SWN++I + DEAI
Sbjct: 386 LYSNVYVGTALVDMYAKCGDLDKAIEVFRKMPC--KNVASWNALICGLAFNGRGDEAIQH 443
Query: 121 LKEMW-VLGLELSASTFVSVVSGC 143
+ M GL+ TF+ V+S C
Sbjct: 444 FQLMRNEEGLKPDDITFIGVLSAC 467
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 65/136 (47%)
Query: 313 PSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTS 372
P ++ LF +L++++RP+ TL L A A + S + + GL + S
Sbjct: 133 PHTSLRLFLHMLRSAIRPDSYTLPFLLLAAARYPAPSLARAAHALLGKIGLNGHDHTVHS 192
Query: 373 LIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKP 432
LI M+S A++VF+ +P +D+ W+AM+ Y GM + +F M + P
Sbjct: 193 LITMYSYLDDPGAARKVFDGIPTRDVVSWNAMMKAYGRVGMNGEVGRMFRDMVKEGTVAP 252
Query: 433 DAVVYTSILSACSHSG 448
+ V +L+AC G
Sbjct: 253 NVVTVAVVLAACRDQG 268
>gi|334184678|ref|NP_180987.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546770|sp|O64705.2|PP184_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g34400
gi|330253874|gb|AEC08968.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 621
Score = 324 bits (831), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 196/564 (34%), Positives = 302/564 (53%), Gaps = 24/564 (4%)
Query: 33 FPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLD--E 90
F +LK C ++N + +++ + +L ++ F LI + DF S + E
Sbjct: 40 FLFLLKKCISVNQL---RQIQAQMLLHSVEKPNF----LIPKAVELGDFNYSSFLFSVTE 92
Query: 91 MPVRLRSVVSWNSIISAHSRACLNDEAILVL-KEMWVLGLELSASTFVSVVSGCSFRQ-- 147
P + S+N +I + + EA L L + M GL+ T+ V C+ +
Sbjct: 93 EP----NHYSFNYMIRGLTNTWNDHEAALSLYRRMKFSGLKPDKFTYNFVFIACAKLEEI 148
Query: 148 --GISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGG 205
G S+H ++K+GL ++ + +S++ MYAK G+V AR +FDEI E VSW ++I G
Sbjct: 149 GVGRSVHSSLFKVGL-ERDVHINHSLIMMYAKCGQVGYARKLFDEITERDTVSWNSMISG 207
Query: 206 YVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNE 265
Y G +A L +M PD ++++ C+ +G+L + + +
Sbjct: 208 YSEAGYAKDAMDLFRKMEEEGFEPDERTLVSMLGACSHLGDLRTGRLLEEMAITKKIGLS 267
Query: 266 DPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLK 325
L + L+SMY KCGDL+ ARRVF+ +++K WT+MI Y+Q G SEA LF + K
Sbjct: 268 TFLGSKLISMYGKCGDLDSARRVFNQMIKKDRVAWTAMITVYSQNGKSSEAFKLFFEMEK 327
Query: 326 TSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINK 385
T V P+ TL+T LSAC +G+L GK+IE + L+ N V T L+ M+ KCGR+ +
Sbjct: 328 TGVSPDAGTLSTVLSACGSVGALELGKQIETHASELSLQHNIYVATGLVDMYGKCGRVEE 387
Query: 386 AKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACS 445
A VFE +P K+ A W+AMI YA G +AL LF +M + P + + +LSAC
Sbjct: 388 ALRVFEAMPVKNEATWNAMITAYAHQGHAKEALLLFDRMS----VPPSDITFIGVLSACV 443
Query: 446 HSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVW 505
H+G+V G +F M S FG+ P IEHY ++DLL RAG D A + + P + +
Sbjct: 444 HAGLVHQGCRYFHEMSSMFGLVPKIEHYTNIIDLLSRAGMLDEAWEFMERFPGKPDEIML 503
Query: 506 APLLSACMKHHNVELGEYAAKNLLTLNPG-STGNYILMANLFTSAGMWKEAATARGLMDD 564
A +L AC K +V + E A + L+ + + GNY++ +N+ MW E+A R LM D
Sbjct: 504 AAILGACHKRKDVAIREKAMRMLMEMKEAKNAGNYVISSNVLADMKMWDESAKMRALMRD 563
Query: 565 RRLTKEPGWSQVEIDGSVQVFVAG 588
R + K PG S +EI+G + F+AG
Sbjct: 564 RGVVKTPGCSWIEIEGELMEFLAG 587
Score = 209 bits (533), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 143/427 (33%), Positives = 215/427 (50%), Gaps = 17/427 (3%)
Query: 1 MIRNSTNN-GSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKV 59
MIR TN E LS Y M +G+ + FT+ V ACA + I G+ VHS + KV
Sbjct: 102 MIRGLTNTWNDHEAALSLYRRMKFSGLKPDKFTYNFVFIACAKLEEIGVGRSVHSSLFKV 161
Query: 60 GFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAIL 119
G ++D + LI MY+KC +RK+ DE + R VSWNS+IS +S A +A+
Sbjct: 162 GLERDVHINHSLIMMYAKCGQVGYARKLFDE--ITERDTVSWNSMISGYSEAGYAKDAMD 219
Query: 120 VLKEMWVLGLELSASTFVSVVSGCS----FRQG--ISMHCCVYKLGLLNNEIPLANSVMS 173
+ ++M G E T VS++ CS R G + K+GL L + ++S
Sbjct: 220 LFRKMEEEGFEPDERTLVSMLGACSHLGDLRTGRLLEEMAITKKIGL---STFLGSKLIS 276
Query: 174 MYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVV 233
MY K G ++ AR +F+++ + V+WT +I Y G +EAF L +M + V+PD
Sbjct: 277 MYGKCGDLDSARRVFNQMIKKDRVAWTAMITVYSQNGKSSEAFKLFFEMEKTGVSPDAGT 336
Query: 234 FLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVL 293
++ C VG L L + + + + + LV MY KCG +E A RVF+A+
Sbjct: 337 LSTVLSACGSVGALELGKQIETHASELSLQHNIYVATGLVDMYGKCGRVEEALRVFEAMP 396
Query: 294 EKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKG-K 352
K+ W +MI YA G+ EA+ LF R+ SV P++ T LSAC G + +G +
Sbjct: 397 VKNEATWNAMITAYAHQGHAKEALLLFDRM---SVPPSDITFIGVLSACVHAGLVHQGCR 453
Query: 353 EIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHG 412
E + GL + T++I + S+ G +++A E ER P K + A I G A H
Sbjct: 454 YFHEMSSMFGLVPKIEHYTNIIDLLSRAGMLDEAWEFMERFPGKPDEIMLAAILG-ACHK 512
Query: 413 MGDQALN 419
D A+
Sbjct: 513 RKDVAIR 519
>gi|297829948|ref|XP_002882856.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297328696|gb|EFH59115.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 753
Score = 324 bits (831), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 182/604 (30%), Positives = 321/604 (53%), Gaps = 16/604 (2%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+I T G +E+ + + + + FT+ L C + GK +H V+ G
Sbjct: 120 LISGYTQVGFYEQAMELFLEARDDNLKLDKFTYAGALGFCGERCDLDFGKLLHGLVVVNG 179
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
Q F+ LIDMYSKC + + D R VSWNS+IS + R +E + +
Sbjct: 180 LSQQVFLINVLIDMYSKCGKLDQAMSLFDR--CNERDQVSWNSLISGYVRVGAAEEPLNL 237
Query: 121 LKEMWVLGLELSASTFVSVVSGCSF-------RQGISMHCCVYKLGLLNNEIPLANSVMS 173
L +M GL+L+ SV+ C +G+++HC KLG+ +I + +++
Sbjct: 238 LAKMHRAGLKLTTYALGSVLKACCINLNEGLMEKGMAIHCYAAKLGM-EFDIVVRTALLD 296
Query: 174 MYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNV-----NEAFGLCNQMRRMSVT 228
MYAK G + EA +F + ++V++ +I G++ + ++ +EAF L +M+R +
Sbjct: 297 MYAKNGSLKEAIKLFSLMPAKNVVTYNAMISGFLQMDDITDEASSEAFKLFMEMQRRGLE 356
Query: 229 PDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRV 288
P F ++ C+ L +H+L+ K+ + +++ + + L+ +Y G E +
Sbjct: 357 PSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEFIGSALIELYALMGSTEDGMQC 416
Query: 289 FDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSL 348
F + ++ + WTS+I + Q A +LF++L + +RP E T++ +SACA+ +L
Sbjct: 417 FASTSKQDIASWTSIIDCHVQNEQLESAFDLFRQLFSSPIRPEEYTVSLMMSACADFAAL 476
Query: 349 SKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGY 408
S G++I+ Y + +G+++ V+TS I M++K G + A +VF V + D+A +SAMI+
Sbjct: 477 SSGEQIQGYAIKSGIDAYTSVKTSSISMYAKSGNMPLANKVFIEVQNPDVATYSAMISSL 536
Query: 409 AIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEP 468
A HG ALN+F M+ G+KP+ + +L AC H G+V G+++F++M++++GI P
Sbjct: 537 AQHGSAHDALNIFESMK-TRGIKPNQQAFLGVLIACCHGGLVTHGVNYFQTMKNSYGINP 595
Query: 469 SIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNL 528
+ +H+ CL DLLGR GR A I + +W LLS+C + + +G+ A+ L
Sbjct: 596 NEKHFTCLADLLGRTGRLSDAENLILSSGFQDHPVMWRALLSSCRVYKDSVIGKRVAERL 655
Query: 529 LTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAG 588
+ L P ++G+Y+L+ N++ +G+ A R LM DR + KEP S + + F
Sbjct: 656 MELEPEASGSYVLLHNIYNDSGVNSSAEEVRELMRDRGVKKEPALSWIVLGNQTHSFAVA 715
Query: 589 DRSH 592
D SH
Sbjct: 716 DWSH 719
Score = 169 bits (427), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 121/505 (23%), Positives = 244/505 (48%), Gaps = 30/505 (5%)
Query: 29 NSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVL 88
+S + + + A S+ GK H H++K ++ L++MY KC + +R++
Sbjct: 47 DSEAYKKLFQTAAKSGSLVLGKLAHGHMVKSSLNPCLYLLNNLLNMYCKCRELGFARQLF 106
Query: 89 DEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCSFRQG 148
D MP R+++S+NS+IS +++ ++A+ + E L+L T+ + C R
Sbjct: 107 DRMPE--RNIISFNSLISGYTQVGFYEQAMELFLEARDDNLKLDKFTYAGALGFCGERCD 164
Query: 149 ISMHCCVYKLGLLN---NEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGG 205
+ ++ L ++N ++ L N ++ MY+K GK+++A S+FD E VSW ++I G
Sbjct: 165 LDFGKLLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCNERDQVSWNSLISG 224
Query: 206 YVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCA---QVGNLFLALSMHSLLLKSGY 262
YV VG E L +M R + +++ C G + +++H K G
Sbjct: 225 YVRVGAAEEPLNLLAKMHRAGLKLTTYALGSVLKACCINLNEGLMEKGMAIHCYAAKLGM 284
Query: 263 NNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLG-----YPSEAV 317
+ + L+ MY K G L+ A ++F + K+V + +MI G+ Q+ SEA
Sbjct: 285 EFDIVVRTALLDMYAKNGSLKEAIKLFSLMPAKNVVTYNAMISGFLQMDDITDEASSEAF 344
Query: 318 NLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMF 377
LF + + + P+ +T + L AC+ +L G++I I N +S+ + ++LI ++
Sbjct: 345 KLFMEMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEFIGSALIELY 404
Query: 378 SKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVY 437
+ G + F +D+A W+++I+ + + + A +LF ++ ++P+
Sbjct: 405 ALMGSTEDGMQCFASTSKQDIASWTSIIDCHVQNEQLESAFDLFRQL-FSSPIRPEEYTV 463
Query: 438 TSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCL----VDLLGRAGRFDLALKTI 493
+ ++SAC+ + G + +Q + I+ I+ Y + + + ++G LA K
Sbjct: 464 SLMMSACADFAALSSG----EQIQ-GYAIKSGIDAYTSVKTSSISMYAKSGNMPLANKVF 518
Query: 494 HEMPVEVQ---AQVWAPLLSACMKH 515
+EVQ ++ ++S+ +H
Sbjct: 519 ----IEVQNPDVATYSAMISSLAQH 539
>gi|414866530|tpg|DAA45087.1| TPA: hypothetical protein ZEAMMB73_840863 [Zea mays]
Length = 851
Score = 324 bits (831), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 196/602 (32%), Positives = 318/602 (52%), Gaps = 63/602 (10%)
Query: 76 SKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEM----------W 125
++ + +R + MP LR+ S+N++++ + R L D A+ V M
Sbjct: 28 ARTGNMEGARATFEAMP--LRTTASYNALLAGYFRNHLPDAALRVFHRMPTRDLASYNAL 85
Query: 126 VLGLELSASTFV-------------SVVSGCSFRQGISMHCCVYKLGLLNNEIPLANSV- 171
+ GL L T SVVS S +G H + L ++P N +
Sbjct: 86 ISGLSLRRHTLPDAAAALATIPYPPSVVSFTSLLRGYVRHGLLADAIQLFRQMPERNHIS 145
Query: 172 ----MSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSV 227
+ + G+V+EAR +FDE+ +V+WT ++ GY VG V+EA L ++M + +V
Sbjct: 146 YTVLLGGFLDAGRVDEARKLFDEMPAKDVVAWTAMLSGYCQVGRVDEARTLFDEMPKRNV 205
Query: 228 TPDLVVFLNLILGCAQVGNLFLALSMHSLLLKS----------GYNN----ED------- 266
V + ++ G AQ G + LA + ++ + GY ED
Sbjct: 206 ----VSWTAMVSGYAQNGQVNLARKLFEVMPERNEVSWTAMLFGYIQAGRIEDAEELFNA 261
Query: 267 ----PLD--NLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLF 320
PL N ++ + + G ++ A+ VFD + E+ W+++I Y Q + EA++ F
Sbjct: 262 MPDHPLAACNGMIVGFGQQGMVDAAKSVFDRMCERDDGTWSAIIKAYEQNEFLMEALSTF 321
Query: 321 KRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKC 380
+ +L +RPN ++ + L+ CA L L G+E+ ++ + + ++LI M+ KC
Sbjct: 322 REMLHIGIRPNYPSVISILTVCAALAVLDYGREVHGAMLRRSFDMDIYAVSALITMYIKC 381
Query: 381 GRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSI 440
G ++KAK VF KD+ +W++MI GYA HG+G++AL++F M+ + G+ PD + Y
Sbjct: 382 GNLDKAKRVFHMFEPKDVVMWNSMITGYAQHGLGEEALHIFDDMR-LAGMVPDGITYIGA 440
Query: 441 LSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEV 500
L+ACS++G V +G F SM++ GI+P +EHY C+VDLLGRAG D AL I MPVE
Sbjct: 441 LTACSYTGKVKEGRDIFNSMRTKSGIKPGLEHYACMVDLLGRAGLVDEALYLIKTMPVEP 500
Query: 501 QAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARG 560
A +W L+ AC H N E+ E +AK LL L PG+ G Y+L+++++TS+G W++A+ R
Sbjct: 501 DAVIWGALMGACRMHKNAEIAEISAKKLLELEPGNAGPYVLLSHIYTSSGRWEDASNMRK 560
Query: 561 LMDDRRLTKEPGWSQVEIDGSVQVFVAGD-RSHHLSVDIRKTLKELHIKLLEAGYIAEAD 619
+ R L K G S +E D V +F +GD +H I K L++L L+E+GY A+
Sbjct: 561 FISSRHLNKSLGCSWIEYDKRVHLFKSGDVLAHQEHASILKMLEKLDGLLMESGYSADGS 620
Query: 620 IV 621
V
Sbjct: 621 FV 622
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 88/378 (23%), Positives = 180/378 (47%), Gaps = 47/378 (12%)
Query: 66 FVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMW 125
F+ G +D +RK+ DEMP + VV+W +++S + + DEA + EM
Sbjct: 153 FLDAGRVD---------EARKLFDEMPAK--DVVAWTAMLSGYCQVGRVDEARTLFDEM- 200
Query: 126 VLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGLLNNEI-------------------- 165
+ + ++ ++VSG + +++ ++++ NE+
Sbjct: 201 ---PKRNVVSWTAMVSGYAQNGQVNLARKLFEVMPERNEVSWTAMLFGYIQAGRIEDAEE 257
Query: 166 --------PLA--NSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEA 215
PLA N ++ + + G V+ A+S+FD + E +W+ II Y + EA
Sbjct: 258 LFNAMPDHPLAACNGMIVGFGQQGMVDAAKSVFDRMCERDDGTWSAIIKAYEQNEFLMEA 317
Query: 216 FGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSM 275
+M + + P+ ++++ CA + L +H +L+ ++ + + L++M
Sbjct: 318 LSTFREMLHIGIRPNYPSVISILTVCAALAVLDYGREVHGAMLRRSFDMDIYAVSALITM 377
Query: 276 YTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATL 335
Y KCG+L+ A+RVF K V +W SMI GYAQ G EA+++F + + P+ T
Sbjct: 378 YIKCGNLDKAKRVFHMFEPKDVVMWNSMITGYAQHGLGEEALHIFDDMRLAGMVPDGITY 437
Query: 336 ATTLSACAELGSLSKGKEIEEYI-VLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVP 394
L+AC+ G + +G++I + +G++ + ++ + + G +++A + + +P
Sbjct: 438 IGALTACSYTGKVKEGRDIFNSMRTKSGIKPGLEHYACMVDLLGRAGLVDEALYLIKTMP 497
Query: 395 -DKDLAVWSAMINGYAIH 411
+ D +W A++ +H
Sbjct: 498 VEPDAVIWGALMGACRMH 515
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/331 (23%), Positives = 153/331 (46%), Gaps = 47/331 (14%)
Query: 168 ANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQM----- 222
AN+ ++ A+ G + AR+ F+ + + S+ ++ GY + A + ++M
Sbjct: 20 ANARIARLARTGNMEGARATFEAMPLRTTASYNALLAGYFRNHLPDAALRVFHRMPTRDL 79
Query: 223 ------------RRMSV------------TPDLVVFLNLILGCAQVGNLFLALSMHSLLL 258
RR ++ P +V F +L+ G + G L A+ + +
Sbjct: 80 ASYNALISGLSLRRHTLPDAAAALATIPYPPSVVSFTSLLRGYVRHGLLADAIQLFRQMP 139
Query: 259 KSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVN 318
+ + + +L+ + G ++ AR++FD + K V WT+M+ GY Q+G EA
Sbjct: 140 ERNHISY----TVLLGGFLDAGRVDEARKLFDEMPAKDVVAWTAMLSGYCQVGRVDEART 195
Query: 319 LFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFS 378
LF + K +V + +S A+ G ++ +++ E + E N T+++ +
Sbjct: 196 LFDEMPKRNV----VSWTAMVSGYAQNGQVNLARKLFEVMP----ERNEVSWTAMLFGYI 247
Query: 379 KCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYT 438
+ GRI A+E+F +PD LA + MI G+ GM D A ++F +M + D ++
Sbjct: 248 QAGRIEDAEELFNAMPDHPLAACNGMIVGFGQQGMVDAAKSVFDRM-----CERDDGTWS 302
Query: 439 SILSACSHSGMVDDGLSFFKSMQSNFGIEPS 469
+I+ A + + + LS F+ M + GI P+
Sbjct: 303 AIIKAYEQNEFLMEALSTFREML-HIGIRPN 332
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 73/290 (25%), Positives = 122/290 (42%), Gaps = 43/290 (14%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+I+ N E LST+ ML G+ N + +L CA + + G+ VH +L+
Sbjct: 304 IIKAYEQNEFLMEALSTFREMLHIGIRPNYPSVISILTVCAALAVLDYGREVHGAMLRRS 363
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F D + + LI MY KC + +++V + VV WNS+I+ +++ L +EA+ +
Sbjct: 364 FDMDIYAVSALITMYIKCGNLDKAKRVFHMF--EPKDVVMWNSMITGYAQHGLGEEALHI 421
Query: 121 LKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGK 180
+M + G+ T++ ++ CS+ GK
Sbjct: 422 FDDMRLAGMVPDGITYIGALTACSYT--------------------------------GK 449
Query: 181 VNEARSIFDEIGETSIVS-----WTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFL 235
V E R IF+ + S + + ++ G V+EA L ++ M V PD V++
Sbjct: 450 VKEGRDIFNSMRTKSGIKPGLEHYACMVDLLGRAGLVDEALYL---IKTMPVEPDAVIWG 506
Query: 236 NLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELA 285
L+ C N +A LL+ N P LL +YT G E A
Sbjct: 507 ALMGACRMHKNAEIAEISAKKLLELEPGNAGPY-VLLSHIYTSSGRWEDA 555
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/256 (23%), Positives = 117/256 (45%), Gaps = 41/256 (16%)
Query: 270 NLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRL------ 323
N ++ + G++E AR F+A+ ++ + +++ GY + P A+ +F R+
Sbjct: 21 NARIARLARTGNMEGARATFEAMPLRTTASYNALLAGYFRNHLPDAALRVFHRMPTRDLA 80
Query: 324 ----------LKTSVRPNEATLATTLS---ACAELGSLSKGKEIEEYIVLNGLESNRQVQ 370
L+ P+ A T+ + SL +G + ++ + ++ RQ+
Sbjct: 81 SYNALISGLSLRRHTLPDAAAALATIPYPPSVVSFTSLLRGY-VRHGLLADAIQLFRQMP 139
Query: 371 -------TSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYK 423
T L+ F GR+++A+++F+ +P KD+ W+AM++GY G D+A LF +
Sbjct: 140 ERNHISYTVLLGGFLDAGRVDEARKLFDEMPAKDVVAWTAMLSGYCQVGRVDEARTLFDE 199
Query: 424 MQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLG-- 481
M K + V +T+++S + +G V+ F+ M P L G
Sbjct: 200 MP-----KRNVVSWTAMVSGYAQNGQVNLARKLFEVM-------PERNEVSWTAMLFGYI 247
Query: 482 RAGRFDLALKTIHEMP 497
+AGR + A + + MP
Sbjct: 248 QAGRIEDAEELFNAMP 263
>gi|225447243|ref|XP_002272819.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g03540-like [Vitis vinifera]
Length = 633
Score = 324 bits (831), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 182/577 (31%), Positives = 313/577 (54%), Gaps = 14/577 (2%)
Query: 7 NNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAF 66
+G L S+ + + +L+ C + + G ++H+HV+K G + D F
Sbjct: 36 KSGELSGALQLLKSIDPGEISAKPVLYASLLQTCTKVLAFNHGLQIHAHVIKSGLEFDRF 95
Query: 67 VQTGLIDMYSKC-SDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMW 125
V L+ +Y K +DF +RKV D + V+ V+SW S+IS + R ++ + +M
Sbjct: 96 VGNSLLTLYFKLGTDFPETRKVFDGLFVK--DVISWTSMISGYVRVGKPMNSLELFWKML 153
Query: 126 VLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKV 181
G+E +A T +V+ CS + G H V G +N + +A++++ M+ + +
Sbjct: 154 AYGVEPNAFTLSAVIKACSELGDLKLGRIFHGVVLGRGFDSNYV-IASALIDMHGRNCAL 212
Query: 182 NEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRR-MSVTPDLVVFLNLILG 240
++AR +FDE+ E + WT+II +EA M+R + PD F ++
Sbjct: 213 DDARQLFDELLEPDAICWTSIISALTRNDFFDEALRFFYSMQRDHGMCPDGFTFGTVLTA 272
Query: 241 CAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLW 300
C +G L +H+ ++ +G+ +++ LV MY KCG + ++R+FD + K+ W
Sbjct: 273 CGNLGRLKQGKEVHAKVITTGFCGNVVVESSLVDMYGKCGSVGESQRIFDRMPIKNSVSW 332
Query: 301 TSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVL 360
++++GGY Q G + +F+++ K + T L CA L ++ +GKE+ +
Sbjct: 333 SALLGGYCQNGDFKSVIQIFRKMEKVDL----YCFGTILRTCAGLAAVRQGKEVHCQYIR 388
Query: 361 NGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNL 420
G + V+++L+ +++KCG I A+ +F+++P ++L W++MI G+A +G G++AL +
Sbjct: 389 KGGWRDVIVESALVDLYAKCGCIEYAQTIFDQMPVRNLITWNSMIGGFAQNGRGEEALRI 448
Query: 421 FYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLL 480
F +M EG+KPD + + IL ACSH G+VD+G +F SM ++GI+ IEHY C+VDLL
Sbjct: 449 FNQMVK-EGIKPDYISFIGILFACSHRGLVDEGREYFISMTKDYGIKVGIEHYSCMVDLL 507
Query: 481 GRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYI 540
GRAG + A I + +WA LL AC N E+ E AK ++ L P +Y+
Sbjct: 508 GRAGLLEEAEILIETSDFRDDSSLWAALLGACTTCTNYEIAERIAKRVMELEPDYHLSYV 567
Query: 541 LMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVE 577
L+AN++ + G W +A R LM DR + K PG S +E
Sbjct: 568 LLANVYKAVGRWNDALRIRRLMKDRGVNKMPGKSWIE 604
Score = 176 bits (447), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 115/418 (27%), Positives = 210/418 (50%), Gaps = 26/418 (6%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI G +L + ML GV N+FT V+KAC+ + + G+ H VL G
Sbjct: 132 MISGYVRVGKPMNSLELFWKMLAYGVEPNAFTLSAVIKACSELGDLKLGRIFHGVVLGRG 191
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEM--PVRLRSVVSWNSIISAHSRACLNDEAI 118
F + + + LIDM+ + +R++ DE+ P + W SIISA +R DEA+
Sbjct: 192 FDSNYVIASALIDMHGRNCALDDARQLFDELLEP----DAICWTSIISALTRNDFFDEAL 247
Query: 119 LVLKEMWV-LGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMS 173
M G+ TF +V++ C +QG +H V G N + + +S++
Sbjct: 248 RFFYSMQRDHGMCPDGFTFGTVLTACGNLGRLKQGKEVHAKVITTGFCGN-VVVESSLVD 306
Query: 174 MYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVV 233
MY K G V E++ IFD + + VSW+ ++GGY G+ + +M ++ DL
Sbjct: 307 MYGKCGSVGESQRIFDRMPIKNSVSWSALLGGYCQNGDFKSVIQIFRKMEKV----DLYC 362
Query: 234 FLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVL 293
F ++ CA + + +H ++ G + +++ LV +Y KCG +E A+ +FD +
Sbjct: 363 FGTILRTCAGLAAVRQGKEVHCQYIRKGGWRDVIVESALVDLYAKCGCIEYAQTIFDQMP 422
Query: 294 EKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKE 353
+++ W SMIGG+AQ G EA+ +F +++K ++P+ + L AC+ G + +G+E
Sbjct: 423 VRNLITWNSMIGGFAQNGRGEEALRIFNQMVKEGIKPDYISFIGILFACSHRGLVDEGRE 482
Query: 354 -----IEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDK-DLAVWSAMI 405
++Y + G+E + ++ + + G + +A+ + E + D ++W+A++
Sbjct: 483 YFISMTKDYGIKVGIEH----YSCMVDLLGRAGLLEEAEILIETSDFRDDSSLWAALL 536
>gi|225447043|ref|XP_002269269.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 640
Score = 324 bits (831), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 176/482 (36%), Positives = 271/482 (56%), Gaps = 35/482 (7%)
Query: 167 LANSVMSMYA--KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRR 224
+A+ ++S A G + AR +F I + I T+I Y N +A ++M
Sbjct: 69 VASRILSFAALSPHGSIPYARFLFYRIRKPDIFIANTLIRAYAFSPNPIDAVVFYSEMTE 128
Query: 225 MSVT-PDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYT------ 277
SV PD+ F L+ C+++ +L L ++HS + K G+++E + N LV MY
Sbjct: 129 SSVVFPDVHTFPLLLKACSEIPSLRLGEAIHSHVFKLGWSSEVSVSNFLVQMYASCGLIE 188
Query: 278 -------------------------KCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGY 312
KCG + ARR+F+A+ ++ V W+ MI GY Q
Sbjct: 189 SAGLVFDRTPECDGASWNIMIGGYLKCGVFKSARRMFEAMPDRDVVSWSVMINGYVQESR 248
Query: 313 PSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTS 372
E + LF+ ++ + PNE+ L LSACA LG++ +G+ IE Y+ + ++ T+
Sbjct: 249 FKEGLGLFQDMMGEKIEPNESVLVNALSACAHLGAMEQGQWIERYMERKNVRLTVRLGTA 308
Query: 373 LIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKP 432
LI M+SKCG + +A EVF ++ +K++ WSAMING AI+G G ALNLF +M+ ++G+KP
Sbjct: 309 LIDMYSKCGSVERALEVFHKMKEKNVLAWSAMINGLAINGQGKDALNLFSQME-MQGVKP 367
Query: 433 DAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKT 492
+ V + IL+ACSHS +VD+G SFF SM S +G++P+ H+ C+VDL GRAG D A
Sbjct: 368 NEVTFIGILNACSHSKLVDEGCSFFHSMTSIYGLKPNAHHHCCMVDLYGRAGMLDQAQTV 427
Query: 493 IHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMW 552
I MP + + +W LL+AC H + ELGE K LL L+P G Y+L++N++ + G W
Sbjct: 428 IKSMPFKPNSAIWGALLNACRIHGDTELGEQVGKRLLELDPNHGGRYVLLSNIYAACGRW 487
Query: 553 KEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKELHIKLLEA 612
A R +M +R+++K PG S +++ ++ FVAGD SH I L E+ +L A
Sbjct: 488 DRVAELRRMMRERQVSKTPGCSFIDLGDTIHEFVAGDSSHPQLEMIYAKLGEMSQELKAA 547
Query: 613 GY 614
GY
Sbjct: 548 GY 549
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 96/408 (23%), Positives = 179/408 (43%), Gaps = 73/408 (17%)
Query: 18 YSSMLQTGV-HGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYS 76
YS M ++ V + TFPL+LKAC+ I S+ G+ +HSHV K+G+ + V L+ MY+
Sbjct: 123 YSEMTESSVVFPDVHTFPLLLKACSEIPSLRLGEAIHSHVFKLGWSSEVSVSNFLVQMYA 182
Query: 77 -------------------------------KCSDFVSSRKVLDEMPVRLRSVVSWNSII 105
KC F S+R++ + MP R VVSW+ +I
Sbjct: 183 SCGLIESAGLVFDRTPECDGASWNIMIGGYLKCGVFKSARRMFEAMPD--RDVVSWSVMI 240
Query: 106 SAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGLLNN-- 163
+ + + E + + ++M +E + S V+ +S C+ + + + N
Sbjct: 241 NGYVQESRFKEGLGLFQDMMGEKIEPNESVLVNALSACAHLGAMEQGQWIERYMERKNVR 300
Query: 164 -EIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQM 222
+ L +++ MY+K G V A +F ++ E ++++W+ +I G G +A L +QM
Sbjct: 301 LTVRLGTALIDMYSKCGSVERALEVFHKMKEKNVLAWSAMINGLAINGQGKDALNLFSQM 360
Query: 223 RRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDL 282
V P+ V F+ ++ C+ HS L+ G + + + S+Y
Sbjct: 361 EMQGVKPNEVTFIGILNACS-----------HSKLVDEGCS----FFHSMTSIYG----- 400
Query: 283 ELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSAC 342
L+ + M+ Y + G +A + K + +PN A L+AC
Sbjct: 401 ----------LKPNAHHHCCMVDLYGRAGMLDQAQTVIKSM---PFKPNSAIWGALLNAC 447
Query: 343 AELGSLSKGKEIEEYIV-LNGLESNRQVQTSLIHMFSKCGRINKAKEV 389
G G+++ + ++ L+ R V S ++++ CGR ++ E+
Sbjct: 448 RIHGDTELGEQVGKRLLELDPNHGGRYVLLS--NIYAACGRWDRVAEL 493
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/191 (20%), Positives = 95/191 (49%), Gaps = 6/191 (3%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI F+E L + M+ + N L ACA++ ++ G+ + ++ +
Sbjct: 239 MINGYVQESRFKEGLGLFQDMMGEKIEPNESVLVNALSACAHLGAMEQGQWIERYMERKN 298
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+ + T LIDMYSKC + +V +M + ++V++W+++I+ + +A+ +
Sbjct: 299 VRLTVRLGTALIDMYSKCGSVERALEVFHKM--KEKNVLAWSAMINGLAINGQGKDALNL 356
Query: 121 LKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVY-KLGLLNNEIPLAN---SVMSMYA 176
+M + G++ + TF+ +++ CS + + C + + + P A+ ++ +Y
Sbjct: 357 FSQMEMQGVKPNEVTFIGILNACSHSKLVDEGCSFFHSMTSIYGLKPNAHHHCCMVDLYG 416
Query: 177 KFGKVNEARSI 187
+ G +++A+++
Sbjct: 417 RAGMLDQAQTV 427
>gi|222631052|gb|EEE63184.1| hypothetical protein OsJ_17993 [Oryza sativa Japonica Group]
Length = 746
Score = 324 bits (831), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 173/470 (36%), Positives = 272/470 (57%), Gaps = 2/470 (0%)
Query: 152 HCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGN 211
H + K+GL N +S+++MY+ AR +FD I +VSW ++ Y VG
Sbjct: 175 HALLGKIGL-NGHDHTVHSLITMYSYLDDPGAARKVFDGIPTRDVVSWNAMMKAYGRVGM 233
Query: 212 VNEAFGLCNQM-RRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDN 270
E + M + +V P++V ++ C G+L L + + + + +
Sbjct: 234 NGEVGRMFRDMVKEGTVAPNVVTVAVVLAACRDQGDLVLGRWVEEWSWSARMEMDSLVGS 293
Query: 271 LLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRP 330
L+ MY KCG++ ARRVFD +++K + W +MI GYAQ G +EA++LF + +RP
Sbjct: 294 ALLGMYEKCGEIAEARRVFDTIIDKDIVAWNAMITGYAQNGMSNEAISLFHSMRIAGMRP 353
Query: 331 NEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVF 390
++ TLA LSAC+ +G+L G E++ Y GL SN V T+L+ M++KCG ++KA EVF
Sbjct: 354 DKITLAGVLSACSAVGALELGSELDGYASRRGLYSNVYVGTALVDMYAKCGDLDKAIEVF 413
Query: 391 ERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMV 450
++P K++A W+A+I G A +G GD+A+ F M++ EGLKPD + + +LSAC H+G+V
Sbjct: 414 RKMPCKNVASWNALICGLAFNGRGDEAIQHFQLMRNEEGLKPDDITFIGVLSACVHAGLV 473
Query: 451 DDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLS 510
DG +F S+ F I P IEHY C+VDLL R+G + A I ++P +V A + LL+
Sbjct: 474 KDGKRWFNSLTPEFQIIPKIEHYSCMVDLLARSGHLEEAWDFIEKIPDKVDAVMLGALLA 533
Query: 511 ACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKE 570
AC K NVE+GE ++ L P ++ NY++ + ++ S+ ++A RGLM +R + K
Sbjct: 534 ACRKCKNVEIGERVINRIIQLEPTNSWNYVVSSKIYASSDRLDDSAKMRGLMRERGVNKT 593
Query: 571 PGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKELHIKLLEAGYIAEADI 620
PG S VE+ G V F AGD H + D+ + L L ++ GY+ D+
Sbjct: 594 PGCSWVEVSGKVLEFYAGDEPQHGADDMYQVLDLLVDEMRLEGYVPNLDV 643
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 94/280 (33%), Positives = 157/280 (56%), Gaps = 3/280 (1%)
Query: 221 QMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCG 280
M R ++ PD L+L A+ LA + H+LL K G N D + L++MY+
Sbjct: 142 HMLRSAIRPDSYTLPFLLLAAARYPAPSLARAAHALLGKIGLNGHDHTVHSLITMYSYLD 201
Query: 281 DLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKT-SVRPNEATLATTL 339
D AR+VFD + + V W +M+ Y ++G E +F+ ++K +V PN T+A L
Sbjct: 202 DPGAARKVFDGIPTRDVVSWNAMMKAYGRVGMNGEVGRMFRDMVKEGTVAPNVVTVAVVL 261
Query: 340 SACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLA 399
+AC + G L G+ +EE+ +E + V ++L+ M+ KCG I +A+ VF+ + DKD+
Sbjct: 262 AACRDQGDLVLGRWVEEWSWSARMEMDSLVGSALLGMYEKCGEIAEARRVFDTIIDKDIV 321
Query: 400 VWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKS 459
W+AMI GYA +GM ++A++LF+ M+ + G++PD + +LSACS G ++ G S
Sbjct: 322 AWNAMITGYAQNGMSNEAISLFHSMR-IAGMRPDKITLAGVLSACSAVGALELG-SELDG 379
Query: 460 MQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVE 499
S G+ ++ LVD+ + G D A++ +MP +
Sbjct: 380 YASRRGLYSNVYVGTALVDMYAKCGDLDKAIEVFRKMPCK 419
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 111/397 (27%), Positives = 195/397 (49%), Gaps = 16/397 (4%)
Query: 14 TLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLID 73
+L + ML++ + +S+T P +L A A + + H+ + K+G LI
Sbjct: 136 SLRLFLHMLRSAIRPDSYTLPFLLLAAARYPAPSLARAAHALLGKIGLNGHDHTVHSLIT 195
Query: 74 MYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLG-LELS 132
MYS D ++RKV D +P R VVSWN+++ A+ R +N E + ++M G + +
Sbjct: 196 MYSYLDDPGAARKVFDGIPT--RDVVSWNAMMKAYGRVGMNGEVGRMFRDMVKEGTVAPN 253
Query: 133 ASTFVSVVSGCSFRQGISMHCCVYKL---GLLNNEIPLANSVMSMYAKFGKVNEARSIFD 189
T V++ C + + + V + + + + ++++ MY K G++ EAR +FD
Sbjct: 254 VVTVAVVLAACRDQGDLVLGRWVEEWSWSARMEMDSLVGSALLGMYEKCGEIAEARRVFD 313
Query: 190 EIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFL 249
I + IV+W +I GY G NEA L + MR + PD + ++ C+ VG L L
Sbjct: 314 TIIDKDIVAWNAMITGYAQNGMSNEAISLFHSMRIAGMRPDKITLAGVLSACSAVGALEL 373
Query: 250 ALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQ 309
+ + G + + LV MY KCGDL+ A VF + K+V W ++I G A
Sbjct: 374 GSELDGYASRRGLYSNVYVGTALVDMYAKCGDLDKAIEVFRKMPCKNVASWNALICGLAF 433
Query: 310 LGYPSEAVNLFKRLL-KTSVRPNEATLATTLSACAELGSLSKGKE-----IEEYIVLNGL 363
G EA+ F+ + + ++P++ T LSAC G + GK E+ ++ +
Sbjct: 434 NGRGDEAIQHFQLMRNEEGLKPDDITFIGVLSACVHAGLVKDGKRWFNSLTPEFQIIPKI 493
Query: 364 ESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAV 400
E + ++ + ++ G + +A + E++PDK AV
Sbjct: 494 EH----YSCMVDLLARSGHLEEAWDFIEKIPDKVDAV 526
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 72/144 (50%), Gaps = 3/144 (2%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI NG E +S + SM G+ + T VL AC+ + ++ G + + + G
Sbjct: 326 MITGYAQNGMSNEAISLFHSMRIAGMRPDKITLAGVLSACSAVGALELGSELDGYASRRG 385
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+ +V T L+DMY+KC D + +V +MP ++V SWN++I + DEAI
Sbjct: 386 LYSNVYVGTALVDMYAKCGDLDKAIEVFRKMPC--KNVASWNALICGLAFNGRGDEAIQH 443
Query: 121 LKEMW-VLGLELSASTFVSVVSGC 143
+ M GL+ TF+ V+S C
Sbjct: 444 FQLMRNEEGLKPDDITFIGVLSAC 467
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 65/136 (47%)
Query: 313 PSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTS 372
P ++ LF +L++++RP+ TL L A A + S + + GL + S
Sbjct: 133 PHTSLRLFLHMLRSAIRPDSYTLPFLLLAAARYPAPSLARAAHALLGKIGLNGHDHTVHS 192
Query: 373 LIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKP 432
LI M+S A++VF+ +P +D+ W+AM+ Y GM + +F M + P
Sbjct: 193 LITMYSYLDDPGAARKVFDGIPTRDVVSWNAMMKAYGRVGMNGEVGRMFRDMVKEGTVAP 252
Query: 433 DAVVYTSILSACSHSG 448
+ V +L+AC G
Sbjct: 253 NVVTVAVVLAACRDQG 268
>gi|302801035|ref|XP_002982274.1| hypothetical protein SELMODRAFT_116224 [Selaginella moellendorffii]
gi|300149866|gb|EFJ16519.1| hypothetical protein SELMODRAFT_116224 [Selaginella moellendorffii]
Length = 920
Score = 324 bits (831), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 197/628 (31%), Positives = 333/628 (53%), Gaps = 19/628 (3%)
Query: 7 NNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAF 66
N+ + L M G+ N +F +L +C + +S+ + +H+ V ++GF D
Sbjct: 214 NDERPDRALLLVRRMWLEGLLPNRASFVAILSSCGDHSSLPLARSIHARVEELGFLGDVV 273
Query: 67 VQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWV 126
V T L+ MY +C S V + M VR + VSWN++I+A ++ A + M
Sbjct: 274 VATALVTMYGRCGSVDESIAVFEAMAVR--NHVSWNAMIAAFAQCGHRSAAFAIYWRMQQ 331
Query: 127 LGLELSASTFVSVV-SGCS-----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGK 180
G + TFV+ + + CS + ++H + GL ++ + ++++MY G
Sbjct: 332 EGFRPNKITFVTALKAACSSSSQDLGESAALHGWIACAGL-EGDVMVGTALVTMYGSTGA 390
Query: 181 VNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILG 240
++ AR+ FD I +IVSW ++ Y + G EA L M+R S+ P+ V +L +LG
Sbjct: 391 IDRARAAFDAIPAKNIVSWNAMLTAYGDNGRAREAMELFAAMKRQSLAPNKVSYL-AVLG 449
Query: 241 CAQVGNLFLALSMHSLLLKSG-YNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFL 299
C + ++ A S+H+ ++ +G + E + N +V M+ + G LE A FDA + K
Sbjct: 450 CCE--DVSEARSIHAEVVGNGLFAQESSIANGVVRMFARSGSLEEAVAAFDATVVKDSVS 507
Query: 300 WTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIV 359
W + + + A+ F + RP++ TL + + CA+LG+L G+ I++ +
Sbjct: 508 WNTKVAALSAREDLHGAITAFYTMQHEGFRPDKFTLVSVVDVCADLGTLELGRSIQQQLS 567
Query: 360 LN-GLESNRQVQTSLIHMFSKCGR-INKAKEVFERVPD--KDLAVWSAMINGYAIHGMGD 415
+E + V +++++M +KCG +++ + +F R+PD KDL W+ MI YA HG G
Sbjct: 568 AAIEVERDVVVASAVMNMVAKCGSSVDECERLFARMPDDRKDLVAWNTMIAAYAQHGHGR 627
Query: 416 QALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPS-IEHYL 474
+AL LF MQ ++PD+ + S+LS CSH+G+V+DG+ F + GIE +EHY
Sbjct: 628 KALKLFRIMQQRSSVRPDSSTFVSVLSGCSHAGLVEDGIHCFFLAREVLGIEQQPVEHYA 687
Query: 475 CLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPG 534
CLVD+LGR G A I +MP+ + VW LL AC + ++E GE AA+ + L
Sbjct: 688 CLVDVLGRMGYLREAEDFIRKMPLPADSVVWTSLLGACSSYGDLEGGERAARAFIELYRS 747
Query: 535 STGNYILMANLFTSAGMWKEAATARGLMDDRRLTKE-PGWSQVEIDGSVQVFVAGDRSHH 593
+ Y++++N++ +AG W+++ R M +RR+ K PG S + + V F A DRSH
Sbjct: 748 DSVGYVVLSNIYAAAGRWEDSIRVREDMAERRVKKRVPGKSSIVVKNRVHEFFARDRSHP 807
Query: 594 LSVDIRKTLKELHIKLLEAGYIAEADIV 621
S I L+ L + EAGY+ + +V
Sbjct: 808 QSDAIYAELERLKGLIREAGYVPDTRLV 835
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 123/484 (25%), Positives = 225/484 (46%), Gaps = 40/484 (8%)
Query: 32 TFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEM 91
T +L+ C + G+++H ++K G ++ + L+ MYSKC + +
Sbjct: 26 TLAGLLRRCIGDADLAQGRQLHRQIVKQGLARNDLLGNYLVQMYSKCRSLDDANAAFSAL 85
Query: 92 PVRLRSVVSWNSIISAHSR--ACLNDEAILVLKE-----------MWVLGLELSAS-TFV 137
R R + +WN++I+A S A + + L+E + VLG S +
Sbjct: 86 --RSRGIATWNTLIAAQSSPAAVFDLYTRMKLEERAENRPNKLTIIAVLGAIASGDPSSS 143
Query: 138 SVVSGCSFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIV 197
S S Q +H + + L ++ +A +++ Y K G V A +F I ++
Sbjct: 144 SSSRAPSIAQARIVHDDI-RGSDLERDLFVATALLDAYGKCGCVESALEVFSRIQVPDLI 202
Query: 198 SW-TTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSL 256
W I+ N + A L +M + P+ F+ ++ C +L LA S+H+
Sbjct: 203 CWNAAIMACAGNDERPDRALLLVRRMWLEGLLPNRASFVAILSSCGDHSSLPLARSIHAR 262
Query: 257 LLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEA 316
+ + G+ + + LV+MY +CG ++ + VF+A+ ++ W +MI +AQ G+ S A
Sbjct: 263 VEELGFLGDVVVATALVTMYGRCGSVDESIAVFEAMAVRNHVSWNAMIAAFAQCGHRSAA 322
Query: 317 VNLFKRLLKTSVRPNEATLATTLSACAELGS--LSKGKEIEEYIVLNGLESNRQVQTSLI 374
++ R+ + RPN+ T T L A S L + + +I GLE + V T+L+
Sbjct: 323 FAIYWRMQQEGFRPNKITFVTALKAACSSSSQDLGESAALHGWIACAGLEGDVMVGTALV 382
Query: 375 HMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDA 434
M+ G I++A+ F+ +P K++ W+AM+ Y +G +A+ LF M+ + L P+
Sbjct: 383 TMYGSTGAIDRARAAFDAIPAKNIVSWNAMLTAYGDNGRAREAMELFAAMKR-QSLAPNK 441
Query: 435 VVYTSILSACS--------HSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRF 486
V Y ++L C H+ +V +GL F E SI + +V + R+G
Sbjct: 442 VSYLAVLGCCEDVSEARSIHAEVVGNGL---------FAQESSIANG--VVRMFARSGSL 490
Query: 487 DLAL 490
+ A+
Sbjct: 491 EEAV 494
Score = 139 bits (351), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 141/575 (24%), Positives = 253/575 (44%), Gaps = 57/575 (9%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINS--IWDGKRVHSHVLK 58
MI G + Y M Q G N TF LKA + +S + + +H +
Sbjct: 309 MIAAFAQCGHRSAAFAIYWRMQQEGFRPNKITFVTALKAACSSSSQDLGESAALHGWIAC 368
Query: 59 VGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAI 118
G + D V T L+ MY +R D +P +++VSWN++++A+ EA+
Sbjct: 369 AGLEGDVMVGTALVTMYGSTGAIDRARAAFDAIPA--KNIVSWNAMLTAYGDNGRAREAM 426
Query: 119 LVLKEMWVLGLELSASTFVSVVSGC-SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAK 177
+ M L + ++++V+ C + S+H V GL E +AN V+ M+A+
Sbjct: 427 ELFAAMKRQSLAPNKVSYLAVLGCCEDVSEARSIHAEVVGNGLFAQESSIANGVVRMFAR 486
Query: 178 FGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNL 237
G + EA + FD VSW T + +++ A M+ PD +++
Sbjct: 487 SGSLEEAVAAFDATVVKDSVSWNTKVAALSAREDLHGAITAFYTMQHEGFRPDKFTLVSV 546
Query: 238 ILGCAQVGNLFLALSMHSLLLKSGYNNED-PLDNLLVSMYTKCG-DLELARRVFDAVLE- 294
+ CA +G L L S+ L + D + + +++M KCG ++ R+F + +
Sbjct: 547 VDVCADLGTLELGRSIQQQLSAAIEVERDVVVASAVMNMVAKCGSSVDECERLFARMPDD 606
Query: 295 -KSVFLWTSMIGGYAQLGYPSEAVNLFKRL-LKTSVRPNEATLATTLSACAELGSLSKGK 352
K + W +MI YAQ G+ +A+ LF+ + ++SVRP+ +T + LS C+ G + G
Sbjct: 607 RKDLVAWNTMIAAYAQHGHGRKALKLFRIMQQRSSVRPDSSTFVSVLSGCSHAGLVEDG- 665
Query: 353 EIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHG 412
IH F A+EV + + + ++ +++ G
Sbjct: 666 ---------------------IHCFF------LAREVLG-IEQQPVEHYACLVDVLGRMG 697
Query: 413 MGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEH 472
+A + KM L D+VV+TS+L ACS G ++ G ++ + +
Sbjct: 698 YLREAEDFIRKMP----LPADSVVWTSLLGACSSYGDLEGGERAARAFIELYRSDSV--G 751
Query: 473 YLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLN 532
Y+ L ++ AGR++ +++ +M E + + P S+ + + V E+ A++ +
Sbjct: 752 YVVLSNIYAAAGRWEDSIRVREDM-AERRVKKRVPGKSSIVVKNRVH--EFFARD--RSH 806
Query: 533 PGSTGNYILMANLFTSAGMWKEAATARGLMDDRRL 567
P S Y A L G+ +EA G + D RL
Sbjct: 807 PQSDAIY---AELERLKGLIREA----GYVPDTRL 834
>gi|449435958|ref|XP_004135761.1| PREDICTED: cohesin subunit SA-1-like [Cucumis sativus]
Length = 1866
Score = 324 bits (831), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 199/613 (32%), Positives = 317/613 (51%), Gaps = 19/613 (3%)
Query: 20 SMLQTGVHGNSFTFPLVLKACANINSIWDGKR-------VHSHVLKVGFQQDAFVQTGLI 72
S ++ H F PL ++NS+ + R +HS ++ F+ L+
Sbjct: 15 SFFKSHYHQTPFLHPLT-----SLNSLLNCSRTSKHATQIHSQLITTALLSLPFLFNNLL 69
Query: 73 DMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELS 132
++Y+KC + + P ++VVSW S+I+ +R +A+ M G+ +
Sbjct: 70 NLYAKCGSVDQTLLLFSSAPDDSKNVVSWTSLITQLTRFKRPFKALTFFNHMRRSGVYPN 129
Query: 133 ASTFVSVVSGCSFR----QGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIF 188
TF +V+S C+ G MH V+K G L E+ + ++++ MYAK + A +F
Sbjct: 130 HYTFSAVLSACTDTTASVHGEQMHSLVWKHGFLA-EVFVVSALVDMYAKCCDMLMAEKVF 188
Query: 189 DEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTP-DLVVFLNLILGCAQVGNL 247
+E+ ++VSW T+I G++ ++A + ++T D V F ++ CA GNL
Sbjct: 189 EEMPVRNLVSWNTMIVGFLQNKLYDQAIFFFKTLLLENLTALDEVSFSSVFSACANAGNL 248
Query: 248 FLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGY 307
+H + LK G N ++N L MY KCG ++F + V W MI Y
Sbjct: 249 EFGKQVHGVALKLGVWNLVYINNSLSDMYGKCGLFNDVAKLFSNTGARDVVTWNIMIMAY 308
Query: 308 AQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNR 367
+A N F + + P+EA+ ++ L +CA L +L +G I I+ +G N
Sbjct: 309 VYNHNYEDACNSFWMMRRKGSIPDEASYSSVLHSCANLAALYQGTLIHNQIIRSGFVKNL 368
Query: 368 QVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHV 427
+V +SLI M++KCG + A ++FE D+++ W+A+I HG + + LF +M
Sbjct: 369 RVASSLITMYAKCGSLVDAFQIFEETEDRNVVCWTAIIAACQQHGHANWVVELFEQMLR- 427
Query: 428 EGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFD 487
EG+KPD + + S+LSACSH+G V++G +F SM GI P EHY C+VDLL RAG D
Sbjct: 428 EGIKPDYITFVSVLSACSHTGRVEEGFFYFNSMIKVHGIYPGHEHYACIVDLLSRAGELD 487
Query: 488 LALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFT 547
A + I MP++ A VW LLSAC H N+ +G+ A L L P + GNY+L+ N+ T
Sbjct: 488 RAKRFIELMPIKPDASVWGALLSACRNHSNLIMGKEVALKLFDLEPDNPGNYVLLCNILT 547
Query: 548 SAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKELHI 607
GM EA R M+ + KEPG S ++I S VF D+SH + +I + L++L
Sbjct: 548 RNGMLNEADEVRRKMESIGVRKEPGCSWIDIKNSTYVFTVHDKSHEKTKEIYEMLEKLKE 607
Query: 608 KLLEAGYIAEADI 620
+ + GY+AE +
Sbjct: 608 LVKKKGYVAETEF 620
Score = 220 bits (561), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 139/462 (30%), Positives = 244/462 (52%), Gaps = 22/462 (4%)
Query: 13 ETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLI 72
+ L+ ++ M ++GV+ N +TF VL AC + + G+++HS V K GF + FV + L+
Sbjct: 113 KALTFFNHMRRSGVYPNHYTFSAVLSACTDTTASVHGEQMHSLVWKHGFLAEVFVVSALV 172
Query: 73 DMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLE-L 131
DMY+KC D + + KV +EMPV R++VSWN++I + L D+AI K + + L L
Sbjct: 173 DMYAKCCDMLMAEKVFEEMPV--RNLVSWNTMIVGFLQNKLYDQAIFFFKTLLLENLTAL 230
Query: 132 SASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSI 187
+F SV S C+ G +H KLG+ N + + NS+ MY K G N+ +
Sbjct: 231 DEVSFSSVFSACANAGNLEFGKQVHGVALKLGVW-NLVYINNSLSDMYGKCGLFNDVAKL 289
Query: 188 FDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNL 247
F G +V+W +I YV N +A MRR PD + +++ CA + L
Sbjct: 290 FSNTGARDVVTWNIMIMAYVYNHNYEDACNSFWMMRRKGSIPDEASYSSVLHSCANLAAL 349
Query: 248 FLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGY 307
+ +H+ +++SG+ + + L++MY KCG L A ++F+ +++V WT++I
Sbjct: 350 YQGTLIHNQIIRSGFVKNLRVASSLITMYAKCGSLVDAFQIFEETEDRNVVCWTAIIAAC 409
Query: 308 AQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKG-KEIEEYIVLNGLESN 366
Q G+ + V LF+++L+ ++P+ T + LSAC+ G + +G I ++G+
Sbjct: 410 QQHGHANWVVELFEQMLREGIKPDYITFVSVLSACSHTGRVEEGFFYFNSMIKVHGIYPG 469
Query: 367 RQVQTSLIHMFSKCGRINKAKEVFERVPDK-DLAVWSAMINGYAIHG---MGDQ-ALNLF 421
+ ++ + S+ G +++AK E +P K D +VW A+++ H MG + AL LF
Sbjct: 470 HEHYACIVDLLSRAGELDRAKRFIELMPIKPDASVWGALLSACRNHSNLIMGKEVALKLF 529
Query: 422 YKMQHVEGLKPDAV-VYTSILSACSHSGMVDDGLSFFKSMQS 462
L+PD Y + + + +GM+++ + M+S
Sbjct: 530 -------DLEPDNPGNYVLLCNILTRNGMLNEADEVRRKMES 564
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 81/144 (56%), Gaps = 2/144 (1%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI N ++E+ +++ M + G + ++ VL +CAN+ +++ G +H+ +++ G
Sbjct: 304 MIMAYVYNHNYEDACNSFWMMRRKGSIPDEASYSSVLHSCANLAALYQGTLIHNQIIRSG 363
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F ++ V + LI MY+KC V + ++ +E R+VV W +II+A + + + +
Sbjct: 364 FVKNLRVASSLITMYAKCGSLVDAFQIFEE--TEDRNVVCWTAIIAACQQHGHANWVVEL 421
Query: 121 LKEMWVLGLELSASTFVSVVSGCS 144
++M G++ TFVSV+S CS
Sbjct: 422 FEQMLREGIKPDYITFVSVLSACS 445
>gi|147771902|emb|CAN75707.1| hypothetical protein VITISV_031420 [Vitis vinifera]
Length = 708
Score = 324 bits (831), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 182/577 (31%), Positives = 313/577 (54%), Gaps = 14/577 (2%)
Query: 7 NNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAF 66
+G L S+ + + +L+ C + + G ++H+HV+K G + D F
Sbjct: 95 KSGELSGALQLLKSIDPGEISAKPVLYASLLQTCTKVLAFNHGLQIHAHVIKSGLEFDRF 154
Query: 67 VQTGLIDMYSKC-SDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMW 125
V L+ +Y K +DF +RKV D + V+ V+SW S+IS + R ++ + +M
Sbjct: 155 VGNSLLTLYFKLGTDFPETRKVFDGLFVK--DVISWTSMISGYVRVGKPMNSLELFWKML 212
Query: 126 VLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKV 181
G+E +A T +V+ CS + G H V G +N + +A++++ M+ + +
Sbjct: 213 AYGVEPNAFTLSAVIKACSELGDLKLGRIFHGVVLGRGFDSNYV-IASALIDMHGRNCAL 271
Query: 182 NEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRR-MSVTPDLVVFLNLILG 240
++AR +FDE+ E + WT+II +EA M+R + PD F ++
Sbjct: 272 DDARQLFDELLEPDAICWTSIISALTRNDFFDEALRFFYSMQRDHGMCPDGFTFGTVLTA 331
Query: 241 CAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLW 300
C +G L +H+ ++ +G+ +++ LV MY KCG + ++R+FD + K+ W
Sbjct: 332 CGNLGRLKQGKEVHAKVITTGFCGNVVVESSLVDMYGKCGSVGESQRIFDRMPIKNSVSW 391
Query: 301 TSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVL 360
++++GGY Q G + +F+++ K + T L CA L ++ +GKE+ +
Sbjct: 392 SALLGGYCQNGDFKSVIQIFRKMEKVDL----YCFGTILRTCAGLAAVRQGKEVHCQYIR 447
Query: 361 NGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNL 420
G + V+++L+ +++KCG I A+ +F+++P ++L W++MI G+A +G G++AL +
Sbjct: 448 KGGWRDVIVESALVDLYAKCGCIEYAQTIFDQMPVRNLITWNSMIGGFAQNGRGEEALRI 507
Query: 421 FYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLL 480
F +M EG+KPD + + IL ACSH G+VD+G +F SM ++GI+ IEHY C+VDLL
Sbjct: 508 FNQMVK-EGIKPDYISFIGILFACSHRGLVDEGREYFISMTKDYGIKVGIEHYSCMVDLL 566
Query: 481 GRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYI 540
GRAG + A I + +WA LL AC N E+ E AK ++ L P +Y+
Sbjct: 567 GRAGLLEEAEILIETSDFRDDSSLWAALLGACTTCTNYEIAERIAKRVMELEPDYHLSYV 626
Query: 541 LMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVE 577
L+AN++ + G W +A R LM DR + K PG S +E
Sbjct: 627 LLANVYKAVGRWNDALRIRRLMKDRGVNKMPGKSWIE 663
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 115/418 (27%), Positives = 210/418 (50%), Gaps = 26/418 (6%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI G +L + ML GV N+FT V+KAC+ + + G+ H VL G
Sbjct: 191 MISGYVRVGKPMNSLELFWKMLAYGVEPNAFTLSAVIKACSELGDLKLGRIFHGVVLGRG 250
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEM--PVRLRSVVSWNSIISAHSRACLNDEAI 118
F + + + LIDM+ + +R++ DE+ P + W SIISA +R DEA+
Sbjct: 251 FDSNYVIASALIDMHGRNCALDDARQLFDELLEP----DAICWTSIISALTRNDFFDEAL 306
Query: 119 LVLKEMWV-LGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMS 173
M G+ TF +V++ C +QG +H V G N + + +S++
Sbjct: 307 RFFYSMQRDHGMCPDGFTFGTVLTACGNLGRLKQGKEVHAKVITTGFCGN-VVVESSLVD 365
Query: 174 MYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVV 233
MY K G V E++ IFD + + VSW+ ++GGY G+ + +M ++ DL
Sbjct: 366 MYGKCGSVGESQRIFDRMPIKNSVSWSALLGGYCQNGDFKSVIQIFRKMEKV----DLYC 421
Query: 234 FLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVL 293
F ++ CA + + +H ++ G + +++ LV +Y KCG +E A+ +FD +
Sbjct: 422 FGTILRTCAGLAAVRQGKEVHCQYIRKGGWRDVIVESALVDLYAKCGCIEYAQTIFDQMP 481
Query: 294 EKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKE 353
+++ W SMIGG+AQ G EA+ +F +++K ++P+ + L AC+ G + +G+E
Sbjct: 482 VRNLITWNSMIGGFAQNGRGEEALRIFNQMVKEGIKPDYISFIGILFACSHRGLVDEGRE 541
Query: 354 -----IEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDK-DLAVWSAMI 405
++Y + G+E + ++ + + G + +A+ + E + D ++W+A++
Sbjct: 542 YFISMTKDYGIKVGIEH----YSCMVDLLGRAGLLEEAEILIETSDFRDDSSLWAALL 595
>gi|113205417|gb|AAU90328.2| Pentatricopeptide repeat domain containing protein, putative
[Solanum demissum]
Length = 819
Score = 324 bits (831), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 187/620 (30%), Positives = 333/620 (53%), Gaps = 11/620 (1%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI + N +E + Y+ M ++GV + TF +L + ++ + ++HSH+++ G
Sbjct: 114 MIGGYSQNNQPKEAFNLYTEMCRSGVKPDHITFATLLSGFDDTTTLKEVLQIHSHIIRFG 173
Query: 61 FQQDAFVQTGLIDMYSK--CSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAI 118
F V L+D Y K C D S ++ EMP + VS+N +I+ +++ +EA+
Sbjct: 174 FSASLIVFNSLVDSYCKTCCLDIAS--QLFSEMPTK--DSVSFNVMITGYTKYGFREEAL 229
Query: 119 LVLKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGLLNN---EIPLANSVMSMY 175
+ +M + + S TF +++ + + ++ L + + +I +AN+++ Y
Sbjct: 230 KLFMQMRNMDFQPSGFTFAAMLGMSVGSEDVIFGQQIHGLAIKTSYVWDIFVANALLDFY 289
Query: 176 AKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFL 235
+K ++ A+++FDE+ E VS+ II GY G ++F L +++ S F
Sbjct: 290 SKHDYIDLAKNLFDEMPELDGVSYNIIITGYAWNGQYEKSFDLFKRLQGTSFDRKNFPFA 349
Query: 236 NLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEK 295
++ A NL + H+ + + +E + N LV MY KC E A R+F + +
Sbjct: 350 TMLSVAAIELNLSMGRQTHAQAVVTTAVSEVQVGNALVDMYAKCEKFEDANRIFANLAYR 409
Query: 296 SVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIE 355
+ WT++I Y Q G+ EA+ +FK + + +V ++AT A+TL A A L S+S GK++
Sbjct: 410 NSVPWTAIISIYVQKGFHEEALKMFKEMNRENVHGDQATFASTLKASANLASVSLGKQLH 469
Query: 356 EYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGD 415
++ GL S+ + L+ M++ CG + A EVF+ +PD+++ W+A+I+ Y+ +G +
Sbjct: 470 SSVIRLGLLSSVFSGSVLVDMYANCGSMKDAIEVFKEMPDRNIVCWNALISAYSQNGDAE 529
Query: 416 QALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLC 475
+ F M GL PD+V + S+L+ACSH G+V+ L +F SM + ++P +HY
Sbjct: 530 ATFSSFADMIE-SGLYPDSVSFLSVLTACSHRGLVEKALWYFNSMTQVYKLDPRRKHYAT 588
Query: 476 LVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNP-G 534
++D+L R+GRF+ A I EMP E +W+ +L++C H N +L + AA L ++
Sbjct: 589 MIDVLCRSGRFNEAENLISEMPFEPDEVMWSSVLNSCRIHKNQDLAKKAADQLFKMDALR 648
Query: 535 STGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHL 594
Y+ M+N++ AG W+ AA + M +R + K +S VEID V VF A DR+H
Sbjct: 649 DAAAYVNMSNIYAEAGKWENAAKVKKAMRERGVKKVTAYSWVEIDHRVHVFTANDRTHPQ 708
Query: 595 SVDIRKTLKELHIKLLEAGY 614
+ IR+ + L + + GY
Sbjct: 709 TEQIRRKINSLVELMDKEGY 728
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 129/509 (25%), Positives = 228/509 (44%), Gaps = 22/509 (4%)
Query: 19 SSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDM---- 74
+ +++TG F LK N I +++ F + + T ++M
Sbjct: 35 ARIVKTGFDPEISRFNFKLKDLVRANQIAKARQL--------FDEMPYRNTSSVNMMVSG 86
Query: 75 YSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSAS 134
Y K + +R++ + M R + VSW +I +S+ EA + EM G++
Sbjct: 87 YVKSRNLFRARELFESMFSR--NEVSWTIMIGGYSQNNQPKEAFNLYTEMCRSGVKPDHI 144
Query: 135 TFVSVVSG----CSFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDE 190
TF +++SG + ++ + +H + + G + I + NS++ Y K ++ A +F E
Sbjct: 145 TFATLLSGFDDTTTLKEVLQIHSHIIRFGFSASLI-VFNSLVDSYCKTCCLDIASQLFSE 203
Query: 191 IGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLA 250
+ VS+ +I GY G EA L QMR M P F ++ ++
Sbjct: 204 MPTKDSVSFNVMITGYTKYGFREEALKLFMQMRNMDFQPSGFTFAAMLGMSVGSEDVIFG 263
Query: 251 LSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQL 310
+H L +K+ Y + + N L+ Y+K ++LA+ +FD + E + +I GYA
Sbjct: 264 QQIHGLAIKTSYVWDIFVANALLDFYSKHDYIDLAKNLFDEMPELDGVSYNIIITGYAWN 323
Query: 311 GYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQ 370
G ++ +LFKRL TS AT LS A +LS G++ V+ S QV
Sbjct: 324 GQYEKSFDLFKRLQGTSFDRKNFPFATMLSVAAIELNLSMGRQTHAQAVVTTAVSEVQVG 383
Query: 371 TSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGL 430
+L+ M++KC + A +F + ++ W+A+I+ Y G ++AL +F +M E +
Sbjct: 384 NALVDMYAKCEKFEDANRIFANLAYRNSVPWTAIISIYVQKGFHEEALKMFKEMNR-ENV 442
Query: 431 KPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLAL 490
D + S L A ++ V G S+ G+ S+ LVD+ G A+
Sbjct: 443 HGDQATFASTLKASANLASVSLGKQLHSSV-IRLGLLSSVFSGSVLVDMYANCGSMKDAI 501
Query: 491 KTIHEMPVEVQAQVWAPLLSACMKHHNVE 519
+ EMP + W L+SA ++ + E
Sbjct: 502 EVFKEMP-DRNIVCWNALISAYSQNGDAE 529
>gi|357126882|ref|XP_003565116.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g13880-like [Brachypodium distachyon]
Length = 796
Score = 324 bits (831), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 188/622 (30%), Positives = 329/622 (52%), Gaps = 17/622 (2%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTG-VHGNSFTFPLVLKACANINSIWDGKRVHSHVLKV 59
+I + G EE+L T+ + V + FT+ L AC+ + +GK VH+ +
Sbjct: 84 LIDAYSRAGQTEESLETFLHAHRAAEVKADRFTYAAALAACSRAGRLKEGKVVHALAVLE 143
Query: 60 GFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAIL 119
G + FV L+ MY++C D +R+V D R VSWNS++S + R ++E +
Sbjct: 144 GLAEGVFVSNSLVSMYARCGDMGEARRVFD--VTEERDDVSWNSLVSGYLRVGAHEEMLR 201
Query: 120 VLKEMWVLGLELSASTFVSVVSGCSFRQGI------SMHCCVYKLGLLNNEIPLANSVMS 173
V M + L++ SV+ CS G ++H CV K GL + ++ LA++++
Sbjct: 202 VFALMRRCAMGLNSFALGSVIKCCSGGDGSVRGIAEAVHGCVVKAGL-DTDLFLASAMVD 260
Query: 174 MYAKFGKVNEARSIFDEIGETSIVSWTTIIGGY------VNVGNVNEAFGLCNQMRRMSV 227
MYAK G ++EA ++F + + ++V + +I G V+ V EA L ++++ +
Sbjct: 261 MYAKRGALSEAVALFKSVLDPNVVVFNAMIAGLCRDEAAVHKEVVREALSLYSELQSRGM 320
Query: 228 TPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARR 287
P F ++I C G++ +H +LK + +D + + L+ +Y +E R
Sbjct: 321 EPTEFTFSSVIRACNLAGDIEFGKQIHGQVLKHCFQGDDFIGSALIDLYFNSACMEDGFR 380
Query: 288 VFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGS 347
F +V ++ V WT+MI G Q A+ LF LL ++P+ T+++ ++ACA L
Sbjct: 381 CFRSVPKQDVVTWTAMISGCVQNELFERALALFHELLGVGLKPDPFTISSVMNACASLAV 440
Query: 348 LSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMING 407
+ G++++ + +G + + S IHM+++ G + A + F+ + D+ WSA+I+
Sbjct: 441 VRTGEQMQCFATKSGFDRFTAMGNSCIHMYARSGNVEAAIQRFQEMESHDVVSWSAIISS 500
Query: 408 YAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIE 467
+A HG QAL F +M + + P+ + + +L+ACSH G+VD+GL +++ M+ +G+
Sbjct: 501 HAQHGCARQALQFFNEMVGAK-VVPNEITFLGVLTACSHGGLVDEGLRYYEIMKMEYGLC 559
Query: 468 PSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKN 527
P+++H C+VDLLGRAGR A I + + VW LL +C H ++E G+ A
Sbjct: 560 PTVKHCTCVVDLLGRAGRLADAEAFIRDSIFHDEPVVWQSLLGSCRIHRDMERGQLVADR 619
Query: 528 LLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVA 587
++ L P S+G Y+ + N++ AG + R LM +R + KEPG S +E+ + FVA
Sbjct: 620 IMELQPASSGCYVNLYNMYLDAGELSLGSKIRDLMKERGVKKEPGLSWIELRSGIHSFVA 679
Query: 588 GDRSHHLSVDIRKTLKELHIKL 609
GD+SH I L E+ K+
Sbjct: 680 GDKSHPECNAIYTKLAEMLSKI 701
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 131/499 (26%), Positives = 249/499 (49%), Gaps = 34/499 (6%)
Query: 37 LKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSK--CSDFVSSRKVLDEMPVR 94
L++CA S+ VH H+ + F++ L+ Y + D +R++LDEMP
Sbjct: 20 LRSCA---SLPQAAAVHGHIARAHPSPSLFLRNTLLAAYCRLGAGDTHQARRLLDEMP-- 74
Query: 95 LRSVVSWNSIISAHSRACLNDEAI-LVLKEMWVLGLELSASTFVSVVSGCS----FRQGI 149
R+ VS+N +I A+SRA +E++ L ++ T+ + ++ CS ++G
Sbjct: 75 RRNAVSFNLLIDAYSRAGQTEESLETFLHAHRAAEVKADRFTYAAALAACSRAGRLKEGK 134
Query: 150 SMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNV 209
+H GL + ++NS++SMYA+ G + EAR +FD E VSW +++ GY+ V
Sbjct: 135 VVHALAVLEGLAEG-VFVSNSLVSMYARCGDMGEARRVFDVTEERDDVSWNSLVSGYLRV 193
Query: 210 GNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGN---LFLALSMHSLLLKSGYNNED 266
G E + MRR ++ + L ++ C G+ +A ++H ++K+G + +
Sbjct: 194 GAHEEMLRVFALMRRCAMGLNSFA-LGSVIKCCSGGDGSVRGIAEAVHGCVVKAGLDTDL 252
Query: 267 PLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYP------SEAVNLF 320
L + +V MY K G L A +F +VL+ +V ++ +MI G + EA++L+
Sbjct: 253 FLASAMVDMYAKRGALSEAVALFKSVLDPNVVVFNAMIAGLCRDEAAVHKEVVREALSLY 312
Query: 321 KRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKC 380
L + P E T ++ + AC G + GK+I ++ + + + + ++LI ++
Sbjct: 313 SELQSRGMEPTEFTFSSVIRACNLAGDIEFGKQIHGQVLKHCFQGDDFIGSALIDLYFNS 372
Query: 381 GRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSI 440
+ F VP +D+ W+AMI+G + + ++AL LF+++ V GLKPD +S+
Sbjct: 373 ACMEDGFRCFRSVPKQDVVTWTAMISGCVQNELFERALALFHELLGV-GLKPDPFTISSV 431
Query: 441 LSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCL----VDLLGRAGRFDLALKTIHEM 496
++AC+ +V G + MQ F + + + + + + R+G + A++ EM
Sbjct: 432 MNACASLAVVRTG----EQMQC-FATKSGFDRFTAMGNSCIHMYARSGNVEAAIQRFQEM 486
Query: 497 PVEVQAQVWAPLLSACMKH 515
W+ ++S+ +H
Sbjct: 487 ESH-DVVSWSAIISSHAQH 504
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 88/365 (24%), Positives = 181/365 (49%), Gaps = 16/365 (4%)
Query: 167 LANSVMSMYAKFG--KVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAF-GLCNQMR 223
L N++++ Y + G ++AR + DE+ + VS+ +I Y G E+ + R
Sbjct: 47 LRNTLLAAYCRLGAGDTHQARRLLDEMPRRNAVSFNLLIDAYSRAGQTEESLETFLHAHR 106
Query: 224 RMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLE 283
V D + + C++ G L +H+L + G + N LVSMY +CGD+
Sbjct: 107 AAEVKADRFTYAAALAACSRAGRLKEGKVVHALAVLEGLAEGVFVSNSLVSMYARCGDMG 166
Query: 284 LARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACA 343
ARRVFD E+ W S++ GY ++G E + +F + + ++ N L + + C+
Sbjct: 167 EARRVFDVTEERDDVSWNSLVSGYLRVGAHEEMLRVFALMRRCAMGLNSFALGSVIKCCS 226
Query: 344 ELGSLSKG--KEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVW 401
+G + + +V GL+++ + ++++ M++K G +++A +F+ V D ++ V+
Sbjct: 227 GGDGSVRGIAEAVHGCVVKAGLDTDLFLASAMVDMYAKRGALSEAVALFKSVLDPNVVVF 286
Query: 402 SAMINGY-----AIHG-MGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLS 455
+AMI G A+H + +AL+L+ ++Q G++P ++S++ AC+ +G ++ G
Sbjct: 287 NAMIAGLCRDEAAVHKEVVREALSLYSELQS-RGMEPTEFTFSSVIRACNLAGDIEFGKQ 345
Query: 456 FF-KSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMK 514
+ ++ F + I L+DL + + + +P + W ++S C++
Sbjct: 346 IHGQVLKHCFQGDDFIGS--ALIDLYFNSACMEDGFRCFRSVPKQ-DVVTWTAMISGCVQ 402
Query: 515 HHNVE 519
+ E
Sbjct: 403 NELFE 407
>gi|297841915|ref|XP_002888839.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297334680|gb|EFH65098.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 682
Score = 324 bits (830), Expect = 9e-86, Method: Compositional matrix adjust.
Identities = 198/630 (31%), Positives = 312/630 (49%), Gaps = 65/630 (10%)
Query: 36 VLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYS------KCSDFVSSRKVLD 89
+L AC ++ + G ++H+H + G + + + L+ YS + + +L
Sbjct: 50 LLSACVDVLAFVPGLQIHAHCVSSGVEYHSALVPKLVTFYSAFNLHREAQSINENSDILH 109
Query: 90 EMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGC----SF 145
+P WN +I+++++ L +E + K M G+ A T+ SV+ C
Sbjct: 110 PLP--------WNVLIASYAKNELFEEVVAAYKRMVSKGIRPDAFTYPSVLKACGETLDV 161
Query: 146 RQGISMHCCV----YKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTT 201
G +H + YK L + N+++SMY +FG V AR +FD + E VSW
Sbjct: 162 ASGRVVHGSIEVSSYKCSLY-----VCNALISMYKRFGNVGIARRLFDHMSERDAVSWNA 216
Query: 202 II-----------------------------------GGYVNVGNVNEAFGLCNQMRRMS 226
+I GGY++ GN A GL ++MR
Sbjct: 217 VINCYASVGMWSEAFELFDKMRFSGVEVSVITWNIISGGYLHTGNYVGALGLISRMRNFP 276
Query: 227 VTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELAR 286
+ D V + + C+ +G + L +H L + Y+ D + N L++MY+KC DL A
Sbjct: 277 TSLDPVAMIIGLKACSLIGAIRLGKEIHGLAIHRSYDGIDNVRNTLITMYSKCDDLRNAF 336
Query: 287 RVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELG 346
VF E S+ W S+I GYAQ+ EA L + +L +PN TLA+ L CA +
Sbjct: 337 IVFQKTEENSLCTWNSIISGYAQVNKSEEASYLLREMLLAGFQPNFITLASILPLCARIA 396
Query: 347 SLSKGKEIEEYIVLNG-LESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMI 405
+L GKE YI+ + + SL+ +++K G+I AK+V + + D ++++I
Sbjct: 397 NLQHGKEFHCYILRRKCFKDYTMLWNSLVDVYAKSGKIVAAKQVSNLMSEIDEVTYTSLI 456
Query: 406 NGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFG 465
+GY G G AL LF +M G+KPD V ++LSACSHS +V +G F MQ +G
Sbjct: 457 DGYGNQGEGRVALALFDEMIR-SGIKPDPVTMVAVLSACSHSKLVHEGQRLFMKMQPKYG 515
Query: 466 IEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAA 525
I P ++H+ C+VDL GRAG A IH MP E WA LL+AC H N E+G++AA
Sbjct: 516 IRPCLQHFSCMVDLYGRAGFLAKAKDIIHRMPYEPSGATWATLLNACHIHGNTEIGKWAA 575
Query: 526 KNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVF 585
+ LL + P + G Y+L+AN++ +AG W + A R +M D + K+PG + + D +F
Sbjct: 576 EKLLEMKPENPGYYVLIANMYATAGSWSKLAEVRTIMRDLGVRKDPGCAWINTDSGFSLF 635
Query: 586 VAGDRSHHLSVDIRKTLKELHIKLLE-AGY 614
GD S+ + D L L+ + + AGY
Sbjct: 636 SVGDTSNPQACDTYPLLDGLNQLMKDTAGY 665
Score = 164 bits (416), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 114/454 (25%), Positives = 212/454 (46%), Gaps = 45/454 (9%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+I + N FEE ++ Y M+ G+ ++FT+P VLKAC + G+ VH +
Sbjct: 116 LIASYAKNELFEEVVAAYKRMVSKGIRPDAFTYPSVLKACGETLDVASGRVVHGSIEVSS 175
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
++ +V LI MY + + +R++ D M R VSWN++I+ ++ + EA +
Sbjct: 176 YKCSLYVCNALISMYKRFGNVGIARRLFDHMSE--RDAVSWNAVINCYASVGMWSEAFEL 233
Query: 121 LKEMWVLGLELSASTFVSVVSGCSFRQG----------------ISMHCCVYKLGL---- 160
+M G+E+S T+ +++SG G S+ +GL
Sbjct: 234 FDKMRFSGVEVSVITW-NIISGGYLHTGNYVGALGLISRMRNFPTSLDPVAMIIGLKACS 292
Query: 161 ------LNNEIP-------------LANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTT 201
L EI + N++++MY+K + A +F + E S+ +W +
Sbjct: 293 LIGAIRLGKEIHGLAIHRSYDGIDNVRNTLITMYSKCDDLRNAFIVFQKTEENSLCTWNS 352
Query: 202 IIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSG 261
II GY V EA L +M P+ + +++ CA++ NL H +L+
Sbjct: 353 IISGYAQVNKSEEASYLLREMLLAGFQPNFITLASILPLCARIANLQHGKEFHCYILRRK 412
Query: 262 -YNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLF 320
+ + L N LV +Y K G + A++V + + E +TS+I GY G A+ LF
Sbjct: 413 CFKDYTMLWNSLVDVYAKSGKIVAAKQVSNLMSEIDEVTYTSLIDGYGNQGEGRVALALF 472
Query: 321 KRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLN-GLESNRQVQTSLIHMFSK 379
++++ ++P+ T+ LSAC+ + +G+ + + G+ Q + ++ ++ +
Sbjct: 473 DEMIRSGIKPDPVTMVAVLSACSHSKLVHEGQRLFMKMQPKYGIRPCLQHFSCMVDLYGR 532
Query: 380 CGRINKAKEVFERVP-DKDLAVWSAMINGYAIHG 412
G + KAK++ R+P + A W+ ++N IHG
Sbjct: 533 AGFLAKAKDIIHRMPYEPSGATWATLLNACHIHG 566
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 94/418 (22%), Positives = 175/418 (41%), Gaps = 42/418 (10%)
Query: 129 LELSASTFVSVVSGCSFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIF 188
L +AS + V +F G+ +H G+ + L +++ Y+ F EA+SI
Sbjct: 44 LHSAASLLSACVDVLAFVPGLQIHAHCVSSGVEYHS-ALVPKLVTFYSAFNLHREAQSIN 102
Query: 189 DEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLF 248
+ + W +I Y E +M + PD + +++ C + ++
Sbjct: 103 ENSDILHPLPWNVLIASYAKNELFEEVVAAYKRMVSKGIRPDAFTYPSVLKACGETLDVA 162
Query: 249 LALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYA 308
+H + S Y + N L+SMY + G++ +ARR+FD + E+ W ++I YA
Sbjct: 163 SGRVVHGSIEVSSYKCSLYVCNALISMYKRFGNVGIARRLFDHMSERDAVSWNAVINCYA 222
Query: 309 QLGYPSEAVNLFKRL-------------------------------------LKTSVRPN 331
+G SEA LF ++ TS+ P
Sbjct: 223 SVGMWSEAFELFDKMRFSGVEVSVITWNIISGGYLHTGNYVGALGLISRMRNFPTSLDP- 281
Query: 332 EATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFE 391
+ L AC+ +G++ GKEI + + V+ +LI M+SKC + A VF+
Sbjct: 282 -VAMIIGLKACSLIGAIRLGKEIHGLAIHRSYDGIDNVRNTLITMYSKCDDLRNAFIVFQ 340
Query: 392 RVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVD 451
+ + L W+++I+GYA ++A L +M + G +P+ + SIL C+ +
Sbjct: 341 KTEENSLCTWNSIISGYAQVNKSEEASYLLREML-LAGFQPNFITLASILPLCARIANLQ 399
Query: 452 DGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLL 509
G F + + + LVD+ ++G+ +A K + + E+ + L+
Sbjct: 400 HGKEFHCYILRRKCFKDYTMLWNSLVDVYAKSGKI-VAAKQVSNLMSEIDEVTYTSLI 456
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/272 (26%), Positives = 127/272 (46%), Gaps = 16/272 (5%)
Query: 203 IGGYVNVGNVNEAFGLCNQMRRMS----VTPDLVVF--LNLILGCAQVGNLFLALSMHSL 256
+G + G++++AF + +R S V+ D+V+ +L+ C V L +H+
Sbjct: 10 LGHLASHGHLHDAFKTFSLLRLQSSPSAVSGDVVLHSAASLLSACVDVLAFVPGLQIHAH 69
Query: 257 LLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFL----WTSMIGGYAQLGY 312
+ SG L LV+ Y+ L R ++ E S L W +I YA+
Sbjct: 70 CVSSGVEYHSALVPKLVTFYSA---FNLHREA-QSINENSDILHPLPWNVLIASYAKNEL 125
Query: 313 PSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTS 372
E V +KR++ +RP+ T + L AC E ++ G+ + I ++ + + V +
Sbjct: 126 FEEVVAAYKRMVSKGIRPDAFTYPSVLKACGETLDVASGRVVHGSIEVSSYKCSLYVCNA 185
Query: 373 LIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKP 432
LI M+ + G + A+ +F+ + ++D W+A+IN YA GM +A LF KM+ G++
Sbjct: 186 LISMYKRFGNVGIARRLFDHMSERDAVSWNAVINCYASVGMWSEAFELFDKMR-FSGVEV 244
Query: 433 DAVVYTSILSACSHSGMVDDGLSFFKSMQSNF 464
+ + I H+G L M+ NF
Sbjct: 245 SVITWNIISGGYLHTGNYVGALGLISRMR-NF 275
>gi|413946224|gb|AFW78873.1| hypothetical protein ZEAMMB73_227843 [Zea mays]
Length = 778
Score = 324 bits (830), Expect = 9e-86, Method: Compositional matrix adjust.
Identities = 189/586 (32%), Positives = 313/586 (53%), Gaps = 10/586 (1%)
Query: 8 NGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFV 67
NG E+ M+++GV N + +L AC G VH VLK G +
Sbjct: 198 NGMLEDAKRAVVGMMRSGVPVNVASLVSILPACGTERDEGFGLCVHGLVLKFGLNSVVNL 257
Query: 68 QTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVL 127
L+DMY K D SS V + M + ++ VSWNS I + A +++ + + + M
Sbjct: 258 GNALVDMYGKFGDLESSMHVFNGM--QEKNEVSWNSAIGCFAHAGFHEDVLEMFRLMSEH 315
Query: 128 GLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNE 183
+ + T S++ F G +H + + ++I +AN++M MYAKFG +
Sbjct: 316 DVTPGSVTLSSLLPALVDLGYFHLGKELHGYSIRRAV-ESDIFIANTLMDMYAKFGCSEK 374
Query: 184 ARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQ 243
A +IF+ I ++VSW +I G EAF L +M++ P+ +NL+ C++
Sbjct: 375 ASAIFENIEVRNVVSWNAMIANLTQNGAEAEAFRLVIEMQKNGECPNSFTLVNLLPACSR 434
Query: 244 VGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSM 303
V ++ + +H+ ++ ++ + N L+ +Y KCG L LAR +FD EK + ++
Sbjct: 435 VASVKMGKQIHAWSIRRSLMSDLFVSNALIDVYAKCGQLNLARYIFDRS-EKDGVSYNTL 493
Query: 304 IGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGL 363
I GY+Q E+++LF+++ + + + LSAC+ L + +GKEI +V L
Sbjct: 494 IVGYSQSQCCFESLHLFQQMRLAGIEHDAVSFMGCLSACSNLSAFKQGKEIHGVLVKRLL 553
Query: 364 ESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYK 423
+S+ + SL+ +++K G ++ A ++F R+ KD+A W+ MI GY +HG D A LF
Sbjct: 554 DSHPFLANSLLDVYTKGGMLDTASKIFNRITQKDVASWNTMILGYGMHGQIDVAFELFDL 613
Query: 424 MQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRA 483
M+ +G++ D V Y ++LS CSH G+VD G +F M + I+P HY C+VDLLGRA
Sbjct: 614 MKD-DGIEYDHVSYIAVLSVCSHGGLVDRGKKYFSQMIAQ-NIKPQQMHYACMVDLLGRA 671
Query: 484 GRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMA 543
G+ + + I MP + VW LL +C H ++EL AA++L L P ++G Y L+
Sbjct: 672 GQLSESAEIIRNMPFRANSDVWGALLGSCRIHGDIELARLAAEHLFELKPENSGYYTLLR 731
Query: 544 NLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGD 589
N+++ +GMW EA + LM R++ K P +S V+ +Q F+ GD
Sbjct: 732 NMYSESGMWNEANGVKKLMKSRKVQKNPAYSWVQSGNKLQAFLVGD 777
Score = 202 bits (515), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 145/500 (29%), Positives = 248/500 (49%), Gaps = 30/500 (6%)
Query: 13 ETLSTYSSMLQTGVHGNSFTFPLVLKACANINSI---WDGKRVHSHVLKVGFQ-QDAFVQ 68
E L Y+ M+++GV + TFP L A A + G +H+ L+ G D F
Sbjct: 98 EALRVYNRMVRSGVRPDDRTFPFALHAAAAVAQAEHPAKGAELHAAALRRGLLLADVFAG 157
Query: 69 TGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLG 128
L+ Y+ C +R+V DEMP R VVSWNS++SA + ++A + M G
Sbjct: 158 NTLVTFYAVCGRAADARRVFDEMPAR--DVVSWNSLVSALLTNGMLEDAKRAVVGMMRSG 215
Query: 129 LELSASTFVSVVSGCSFRQ----GISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEA 184
+ ++ ++ VS++ C + G+ +H V K GL N+ + L N+++ MY KFG + +
Sbjct: 216 VPVNVASLVSILPACGTERDEGFGLCVHGLVLKFGL-NSVVNLGNALVDMYGKFGDLESS 274
Query: 185 RSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQV 244
+F+ + E + VSW + IG + + G + + M VTP V +L+ +
Sbjct: 275 MHVFNGMQEKNEVSWNSAIGCFAHAGFHEDVLEMFRLMSEHDVTPGSVTLSSLLPALVDL 334
Query: 245 GNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMI 304
G L +H ++ ++ + N L+ MY K G E A +F+ + ++V W +MI
Sbjct: 335 GYFHLGKELHGYSIRRAVESDIFIANTLMDMYAKFGCSEKASAIFENIEVRNVVSWNAMI 394
Query: 305 GGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLE 364
Q G +EA L + K PN TL L AC+ + S+ GK+I + + L
Sbjct: 395 ANLTQNGAEAEAFRLVIEMQKNGECPNSFTLVNLLPACSRVASVKMGKQIHAWSIRRSLM 454
Query: 365 SNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKM 424
S+ V +LI +++KCG++N A+ +F+R +KD ++ +I GY+ ++L+LF +M
Sbjct: 455 SDLFVSNALIDVYAKCGQLNLARYIFDR-SEKDGVSYNTLIVGYSQSQCCFESLHLFQQM 513
Query: 425 QHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGI--------EPSIEHYLCL 476
+ + G++ DAV + LSACS+ LS FK + G+ P + + L
Sbjct: 514 R-LAGIEHDAVSFMGCLSACSN-------LSAFKQGKEIHGVLVKRLLDSHPFLAN--SL 563
Query: 477 VDLLGRAGRFDLALKTIHEM 496
+D+ + G D A K + +
Sbjct: 564 LDVYTKGGMLDTASKIFNRI 583
Score = 184 bits (468), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 128/453 (28%), Positives = 218/453 (48%), Gaps = 20/453 (4%)
Query: 50 KRVHSHVLKVGFQQDAFVQTG-LIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAH 108
+R H+ L G +F G L+ Y+ D S+ +L P RLRS WNS+ A
Sbjct: 31 RRAHAASLVSGALTASFPLAGALLLSYAALPDIPSAHLILRHHPFRLRSAFLWNSLSRAL 90
Query: 109 SRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCSFR-------QGISMHCCVYKLGLL 161
+ A L EA+ V M G+ TF + + +G +H + GLL
Sbjct: 91 ASAALPCEALRVYNRMVRSGVRPDDRTFPFALHAAAAVAQAEHPAKGAELHAAALRRGLL 150
Query: 162 NNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQ 221
++ N++++ YA G+ +AR +FDE+ +VSW +++ + G + +A
Sbjct: 151 LADVFAGNTLVTFYAVCGRAADARRVFDEMPARDVVSWNSLVSALLTNGMLEDAKRAVVG 210
Query: 222 MRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGD 281
M R V ++ ++++ C + L +H L+LK G N+ L N LV MY K GD
Sbjct: 211 MMRSGVPVNVASLVSILPACGTERDEGFGLCVHGLVLKFGLNSVVNLGNALVDMYGKFGD 270
Query: 282 LELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSA 341
LE + VF+ + EK+ W S IG +A G+ + + +F+ + + V P TL++ L A
Sbjct: 271 LESSMHVFNGMQEKNEVSWNSAIGCFAHAGFHEDVLEMFRLMSEHDVTPGSVTLSSLLPA 330
Query: 342 CAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVW 401
+LG GKE+ Y + +ES+ + +L+ M++K G KA +FE + +++ W
Sbjct: 331 LVDLGYFHLGKELHGYSIRRAVESDIFIANTLMDMYAKFGCSEKASAIFENIEVRNVVSW 390
Query: 402 SAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDG-----LSF 456
+AMI +G +A L +MQ G P++ ++L ACS V G S
Sbjct: 391 NAMIANLTQNGAEAEAFRLVIEMQK-NGECPNSFTLVNLLPACSRVASVKMGKQIHAWSI 449
Query: 457 FKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLA 489
+S+ S+ + + L+D+ + G+ +LA
Sbjct: 450 RRSLMSDLFVSNA------LIDVYAKCGQLNLA 476
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 78/249 (31%), Positives = 134/249 (53%), Gaps = 8/249 (3%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI N T NG+ E M + G NSFT +L AC+ + S+ GK++H+ ++
Sbjct: 393 MIANLTQNGAEAEAFRLVIEMQKNGECPNSFTLVNLLPACSRVASVKMGKQIHAWSIRRS 452
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
D FV LID+Y+KC +R + D + VS+N++I +S++ E++ +
Sbjct: 453 LMSDLFVSNALIDVYAKCGQLNLARYIFDRSE---KDGVSYNTLIVGYSQSQCCFESLHL 509
Query: 121 LKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
++M + G+E A +F+ +S CS F+QG +H + K LL++ LANS++ +Y
Sbjct: 510 FQQMRLAGIEHDAVSFMGCLSACSNLSAFKQGKEIHGVLVKR-LLDSHPFLANSLLDVYT 568
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K G ++ A IF+ I + + SW T+I GY G ++ AF L + M+ + D V ++
Sbjct: 569 KGGMLDTASKIFNRITQKDVASWNTMILGYGMHGQIDVAFELFDLMKDDGIEYDHVSYIA 628
Query: 237 LILGCAQVG 245
++ C+ G
Sbjct: 629 VLSVCSHGG 637
>gi|38344863|emb|CAE01289.2| OSJNBa0020P07.6 [Oryza sativa Japonica Group]
Length = 854
Score = 324 bits (830), Expect = 9e-86, Method: Compositional matrix adjust.
Identities = 193/610 (31%), Positives = 321/610 (52%), Gaps = 17/610 (2%)
Query: 29 NSFTFPLVLKACANINS----IWDGKRVHSHVLKVGF--QQDAFVQTGLIDMYSKCSDFV 82
SFT VL+A +++ + + G+ H+ LK G F L+ MY++
Sbjct: 161 TSFTLVSVLRAVSHLPAAAAAVRLGREAHAFALKNGLLHGHQRFAFNALLSMYARLGLVA 220
Query: 83 SSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSG 142
++++ VV+WN+++S ++ + DEA+ L +M LG+ TF S +
Sbjct: 221 DAQRLFAGATPGRGDVVTWNTMVSVLVQSGMFDEAVQTLYDMVALGVRPDGVTFASALPA 280
Query: 143 CSFRQ----GISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGET--SI 196
CS + G MH V K L +A++++ MYA +V +AR +FD + ++ +
Sbjct: 281 CSRLELLDVGREMHAYVIKDDELAANSFVASALVDMYATHEQVGKARQVFDMVPDSGKQL 340
Query: 197 VSWTTIIGGYVNVGNVNEAFGLCNQMR-RMSVTPDLVVFLNLILGCAQVGNLFLALSMHS 255
W +I GY G EA L +M P +++ CA+ ++H
Sbjct: 341 GMWNAMICGYAQAGMDEEALRLFARMEAEAGFVPCETTMASVLPACARSEAFAGKEAVHG 400
Query: 256 LLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSE 315
++K G + N L+ MY + G ++ARR+F V V W ++I G G+ ++
Sbjct: 401 YVVKRGMAGNRFVQNALMDMYARLGKTDVARRIFAMVDLPDVVSWNTLITGCVVQGHVAD 460
Query: 316 AVNL---FKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTS 372
A L ++L + V PN TL T L CA L + ++GKEI Y V + L+++ V ++
Sbjct: 461 AFQLAREMQQLEEGGVVPNAITLMTLLPGCAILAAPARGKEIHGYAVRHALDTDVAVGSA 520
Query: 373 LIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKP 432
L+ M++KCG + ++ VF+R+P ++ W+ +I Y +HG+G +A LF +M +P
Sbjct: 521 LVDMYAKCGCLALSRAVFDRLPRRNTITWNVLIMAYGMHGLGGEATVLFDRMTASGEARP 580
Query: 433 DAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKT 492
+ V + + L+ACSHSGMVD GL F +M+ + G+EP+ + C+VD+LGRAGR D A
Sbjct: 581 NEVTFMAALAACSHSGMVDRGLQLFHAMERDHGVEPTPDILACVVDILGRAGRLDEAYAM 640
Query: 493 IHEMPV-EVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGM 551
+ M E Q W+ +L AC H NV LGE A + LL L P +Y+L+ N++++AG
Sbjct: 641 VTSMETGEQQVSAWSTMLGACRLHRNVHLGEIAGERLLELEPEEASHYVLLCNIYSAAGQ 700
Query: 552 WKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKELHIKLLE 611
W AA R M R + KEPG S +E+DG++ F+AG+ +H S ++ ++ L +++
Sbjct: 701 WTRAAEVRSRMRRRGVAKEPGCSWIEVDGAIHRFMAGESAHPASEEVHAHMEALWGEMVA 760
Query: 612 AGYIAEADIV 621
GY + V
Sbjct: 761 RGYTPDTSCV 770
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 116/424 (27%), Positives = 215/424 (50%), Gaps = 14/424 (3%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
M+ +G F+E + T M+ GV + TF L AC+ + + G+ +H++V+K
Sbjct: 242 MVSVLVQSGMFDEAVQTLYDMVALGVRPDGVTFASALPACSRLELLDVGREMHAYVIKDD 301
Query: 61 -FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAIL 119
++FV + L+DMY+ +R+V D +P + + WN++I +++A +++EA+
Sbjct: 302 ELAANSFVASALVDMYATHEQVGKARQVFDMVPDSGKQLGMWNAMICGYAQAGMDEEALR 361
Query: 120 VLKEMWV-LGLELSASTFVSVVSGCSFRQGI----SMHCCVYKLGLLNNEIPLANSVMSM 174
+ M G +T SV+ C+ + ++H V K G+ N + N++M M
Sbjct: 362 LFARMEAEAGFVPCETTMASVLPACARSEAFAGKEAVHGYVVKRGMAGNRF-VQNALMDM 420
Query: 175 YAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRM---SVTPDL 231
YA+ GK + AR IF + +VSW T+I G V G+V +AF L +M+++ V P+
Sbjct: 421 YARLGKTDVARRIFAMVDLPDVVSWNTLITGCVVQGHVADAFQLAREMQQLEEGGVVPNA 480
Query: 232 VVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDA 291
+ + L+ GCA + +H ++ + + + + LV MY KCG L L+R VFD
Sbjct: 481 ITLMTLLPGCAILAAPARGKEIHGYAVRHALDTDVAVGSALVDMYAKCGCLALSRAVFDR 540
Query: 292 VLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTS-VRPNEATLATTLSACAELGSLSK 350
+ ++ W +I Y G EA LF R+ + RPNE T L+AC+ G + +
Sbjct: 541 LPRRNTITWNVLIMAYGMHGLGGEATVLFDRMTASGEARPNEVTFMAALAACSHSGMVDR 600
Query: 351 GKEIEEYIVLN-GLESNRQVQTSLIHMFSKCGRINKAKEVFERVP--DKDLAVWSAMING 407
G ++ + + G+E + ++ + + GR+++A + + ++ ++ WS M+
Sbjct: 601 GLQLFHAMERDHGVEPTPDILACVVDILGRAGRLDEAYAMVTSMETGEQQVSAWSTMLGA 660
Query: 408 YAIH 411
+H
Sbjct: 661 CRLH 664
Score = 176 bits (447), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 134/468 (28%), Positives = 224/468 (47%), Gaps = 27/468 (5%)
Query: 2 IRNSTNNGSFEETLSTYSS--MLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKV 59
+R+ T G+ L SS M + P +K+ A + + +H+ L+
Sbjct: 27 VRSLTAAGNHAAALRALSSITMASPQQQLDHSALPPAIKSAAALRDARSARAIHAAALRR 86
Query: 60 GF--QQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLN--- 114
G + V L+ Y++C ++ +V + VS+NS+ISA CL
Sbjct: 87 GLLHRPSPAVANALLTAYARCGRLAAALEVFGSISDSAHDAVSFNSLISA---LCLFRRW 143
Query: 115 DEAILVLKEMWVLGLELSASTFVSVVSGCS--------FRQGISMHCCVYKLGLLNNEIP 166
D A+ L+ M G L++ T VSV+ S R G H K GLL+
Sbjct: 144 DHALAALRAMLAGGHPLTSFTLVSVLRAVSHLPAAAAAVRLGREAHAFALKNGLLHGHQR 203
Query: 167 LA-NSVMSMYAKFGKVNEARSIF--DEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMR 223
A N+++SMYA+ G V +A+ +F G +V+W T++ V G +EA M
Sbjct: 204 FAFNALLSMYARLGLVADAQRLFAGATPGRGDVVTWNTMVSVLVQSGMFDEAVQTLYDMV 263
Query: 224 RMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDP-LDNLLVSMYTKCGDL 282
+ V PD V F + + C+++ L + MH+ ++K + + + LV MY +
Sbjct: 264 ALGVRPDGVTFASALPACSRLELLDVGREMHAYVIKDDELAANSFVASALVDMYATHEQV 323
Query: 283 ELARRVFDAVLE--KSVFLWTSMIGGYAQLGYPSEAVNLFKRL-LKTSVRPNEATLATTL 339
AR+VFD V + K + +W +MI GYAQ G EA+ LF R+ + P E T+A+ L
Sbjct: 324 GKARQVFDMVPDSGKQLGMWNAMICGYAQAGMDEEALRLFARMEAEAGFVPCETTMASVL 383
Query: 340 SACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLA 399
ACA + + + + Y+V G+ NR VQ +L+ M+++ G+ + A+ +F V D+
Sbjct: 384 PACARSEAFAGKEAVHGYVVKRGMAGNRFVQNALMDMYARLGKTDVARRIFAMVDLPDVV 443
Query: 400 VWSAMINGYAIHGMGDQALNLFYKMQHVE--GLKPDAVVYTSILSACS 445
W+ +I G + G A L +MQ +E G+ P+A+ ++L C+
Sbjct: 444 SWNTLITGCVVQGHVADAFQLAREMQQLEEGGVVPNAITLMTLLPGCA 491
>gi|297602077|ref|NP_001052059.2| Os04g0118700 [Oryza sativa Japonica Group]
gi|222628272|gb|EEE60404.1| hypothetical protein OsJ_13579 [Oryza sativa Japonica Group]
gi|255675134|dbj|BAF13973.2| Os04g0118700 [Oryza sativa Japonica Group]
Length = 856
Score = 324 bits (830), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 193/610 (31%), Positives = 321/610 (52%), Gaps = 17/610 (2%)
Query: 29 NSFTFPLVLKACANI----NSIWDGKRVHSHVLKVGF--QQDAFVQTGLIDMYSKCSDFV 82
SFT VL+A +++ ++ G+ H+ LK G F L+ MY++
Sbjct: 163 TSFTLVSVLRAVSHLPAAAAAVRLGREAHAFALKNGLLHGHQRFAFNALLSMYARLGLVA 222
Query: 83 SSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSG 142
++++ VV+WN+++S ++ + DEA+ L +M LG+ TF S +
Sbjct: 223 DAQRLFAGATPGRGDVVTWNTMVSVLVQSGMFDEAVQTLYDMVALGVRPDGVTFASALPA 282
Query: 143 CSFRQ----GISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGET--SI 196
CS + G MH V K L +A++++ MYA +V +AR +FD + ++ +
Sbjct: 283 CSRLELLDVGREMHAYVIKDDELAANSFVASALVDMYATHEQVGKARQVFDMVPDSGKQL 342
Query: 197 VSWTTIIGGYVNVGNVNEAFGLCNQMR-RMSVTPDLVVFLNLILGCAQVGNLFLALSMHS 255
W +I GY G EA L +M P +++ CA+ ++H
Sbjct: 343 GMWNAMICGYAQAGMDEEALRLFARMEAEAGFVPCETTMASVLPACARSEAFAGKEAVHG 402
Query: 256 LLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSE 315
++K G + N L+ MY + G ++ARR+F V V W ++I G G+ ++
Sbjct: 403 YVVKRGMAGNRFVQNALMDMYARLGKTDVARRIFAMVDLPDVVSWNTLITGCVVQGHVAD 462
Query: 316 AVNL---FKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTS 372
A L ++L + V PN TL T L CA L + ++GKEI Y V + L+++ V ++
Sbjct: 463 AFQLAREMQQLEEGGVVPNAITLMTLLPGCAILAAPARGKEIHGYAVRHALDTDVAVGSA 522
Query: 373 LIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKP 432
L+ M++KCG + ++ VF+R+P ++ W+ +I Y +HG+G +A LF +M +P
Sbjct: 523 LVDMYAKCGCLALSRAVFDRLPRRNTITWNVLIMAYGMHGLGGEATVLFDRMTASGEARP 582
Query: 433 DAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKT 492
+ V + + L+ACSHSGMVD GL F +M+ + G+EP+ + C+VD+LGRAGR D A
Sbjct: 583 NEVTFMAALAACSHSGMVDRGLQLFHAMERDHGVEPTPDILACVVDILGRAGRLDEAYAM 642
Query: 493 IHEMPV-EVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGM 551
+ M E Q W+ +L AC H NV LGE A + LL L P +Y+L+ N++++AG
Sbjct: 643 VTSMETGEQQVSAWSTMLGACRLHRNVHLGEIAGERLLELEPEEASHYVLLCNIYSAAGQ 702
Query: 552 WKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKELHIKLLE 611
W AA R M R + KEPG S +E+DG++ F+AG+ +H S ++ ++ L +++
Sbjct: 703 WTRAAEVRSRMRRRGVAKEPGCSWIEVDGAIHRFMAGESAHPASEEVHAHMEALWGEMVA 762
Query: 612 AGYIAEADIV 621
GY + V
Sbjct: 763 RGYTPDTSCV 772
Score = 196 bits (498), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 116/424 (27%), Positives = 215/424 (50%), Gaps = 14/424 (3%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
M+ +G F+E + T M+ GV + TF L AC+ + + G+ +H++V+K
Sbjct: 244 MVSVLVQSGMFDEAVQTLYDMVALGVRPDGVTFASALPACSRLELLDVGREMHAYVIKDD 303
Query: 61 -FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAIL 119
++FV + L+DMY+ +R+V D +P + + WN++I +++A +++EA+
Sbjct: 304 ELAANSFVASALVDMYATHEQVGKARQVFDMVPDSGKQLGMWNAMICGYAQAGMDEEALR 363
Query: 120 VLKEMWV-LGLELSASTFVSVVSGCSFRQGI----SMHCCVYKLGLLNNEIPLANSVMSM 174
+ M G +T SV+ C+ + ++H V K G+ N + N++M M
Sbjct: 364 LFARMEAEAGFVPCETTMASVLPACARSEAFAGKEAVHGYVVKRGMAGNRF-VQNALMDM 422
Query: 175 YAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRM---SVTPDL 231
YA+ GK + AR IF + +VSW T+I G V G+V +AF L +M+++ V P+
Sbjct: 423 YARLGKTDVARRIFAMVDLPDVVSWNTLITGCVVQGHVADAFQLAREMQQLEEGGVVPNA 482
Query: 232 VVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDA 291
+ + L+ GCA + +H ++ + + + + LV MY KCG L L+R VFD
Sbjct: 483 ITLMTLLPGCAILAAPARGKEIHGYAVRHALDTDVAVGSALVDMYAKCGCLALSRAVFDR 542
Query: 292 VLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTS-VRPNEATLATTLSACAELGSLSK 350
+ ++ W +I Y G EA LF R+ + RPNE T L+AC+ G + +
Sbjct: 543 LPRRNTITWNVLIMAYGMHGLGGEATVLFDRMTASGEARPNEVTFMAALAACSHSGMVDR 602
Query: 351 GKEIEEYIVLN-GLESNRQVQTSLIHMFSKCGRINKAKEVFERVP--DKDLAVWSAMING 407
G ++ + + G+E + ++ + + GR+++A + + ++ ++ WS M+
Sbjct: 603 GLQLFHAMERDHGVEPTPDILACVVDILGRAGRLDEAYAMVTSMETGEQQVSAWSTMLGA 662
Query: 408 YAIH 411
+H
Sbjct: 663 CRLH 666
Score = 176 bits (447), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 134/468 (28%), Positives = 224/468 (47%), Gaps = 27/468 (5%)
Query: 2 IRNSTNNGSFEETLSTYSS--MLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKV 59
+R+ T G+ L SS M + P +K+ A + + +H+ L+
Sbjct: 29 VRSLTAAGNHAAALRALSSITMASPQQQLDHSALPPAIKSAAALRDARSARAIHAAALRR 88
Query: 60 GF--QQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLN--- 114
G + V L+ Y++C ++ +V + VS+NS+ISA CL
Sbjct: 89 GLLHRPSPAVANALLTAYARCGRLAAALEVFGSISDSAHDAVSFNSLISA---LCLFRRW 145
Query: 115 DEAILVLKEMWVLGLELSASTFVSVVSGCS--------FRQGISMHCCVYKLGLLNNEIP 166
D A+ L+ M G L++ T VSV+ S R G H K GLL+
Sbjct: 146 DHALAALRAMLAGGHPLTSFTLVSVLRAVSHLPAAAAAVRLGREAHAFALKNGLLHGHQR 205
Query: 167 LA-NSVMSMYAKFGKVNEARSIF--DEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMR 223
A N+++SMYA+ G V +A+ +F G +V+W T++ V G +EA M
Sbjct: 206 FAFNALLSMYARLGLVADAQRLFAGATPGRGDVVTWNTMVSVLVQSGMFDEAVQTLYDMV 265
Query: 224 RMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDP-LDNLLVSMYTKCGDL 282
+ V PD V F + + C+++ L + MH+ ++K + + + LV MY +
Sbjct: 266 ALGVRPDGVTFASALPACSRLELLDVGREMHAYVIKDDELAANSFVASALVDMYATHEQV 325
Query: 283 ELARRVFDAVLE--KSVFLWTSMIGGYAQLGYPSEAVNLFKRL-LKTSVRPNEATLATTL 339
AR+VFD V + K + +W +MI GYAQ G EA+ LF R+ + P E T+A+ L
Sbjct: 326 GKARQVFDMVPDSGKQLGMWNAMICGYAQAGMDEEALRLFARMEAEAGFVPCETTMASVL 385
Query: 340 SACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLA 399
ACA + + + + Y+V G+ NR VQ +L+ M+++ G+ + A+ +F V D+
Sbjct: 386 PACARSEAFAGKEAVHGYVVKRGMAGNRFVQNALMDMYARLGKTDVARRIFAMVDLPDVV 445
Query: 400 VWSAMINGYAIHGMGDQALNLFYKMQHVE--GLKPDAVVYTSILSACS 445
W+ +I G + G A L +MQ +E G+ P+A+ ++L C+
Sbjct: 446 SWNTLITGCVVQGHVADAFQLAREMQQLEEGGVVPNAITLMTLLPGCA 493
>gi|116308873|emb|CAH66009.1| H0613H07.7 [Oryza sativa Indica Group]
gi|116317921|emb|CAH65944.1| H0716A07.2 [Oryza sativa Indica Group]
Length = 854
Score = 324 bits (830), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 193/610 (31%), Positives = 321/610 (52%), Gaps = 17/610 (2%)
Query: 29 NSFTFPLVLKACANI----NSIWDGKRVHSHVLKVGF--QQDAFVQTGLIDMYSKCSDFV 82
SFT VL+A +++ ++ G+ H+ LK G F L+ MY++
Sbjct: 161 TSFTLVSVLRAVSHLPAAAAAVRLGREAHAFALKNGLLHGHQRFAFNALLSMYARLGLVA 220
Query: 83 SSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSG 142
++++ VV+WN+++S ++ + DEA+ L +M LG+ TF S +
Sbjct: 221 DAQRLFAGATPGRGDVVTWNTMVSVLVQSGMFDEAVQTLYDMVALGVRPDGVTFASALPA 280
Query: 143 CSFRQ----GISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGET--SI 196
CS + G MH V K L +A++++ MYA +V +AR +FD + ++ +
Sbjct: 281 CSRLELLDVGREMHAYVIKDDELAANSFVASALVDMYATHEQVGKARQVFDMVPDSGKQL 340
Query: 197 VSWTTIIGGYVNVGNVNEAFGLCNQMR-RMSVTPDLVVFLNLILGCAQVGNLFLALSMHS 255
W +I GY G EA L +M P +++ CA+ ++H
Sbjct: 341 GMWNAMICGYAQAGMDEEALRLFARMEAEAGFVPCETTMASVLPACARSEAFAGKEAVHG 400
Query: 256 LLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSE 315
++K G + N L+ MY + G ++ARR+F V V W ++I G G+ ++
Sbjct: 401 YVVKRGMAGNRFVQNALMDMYARLGKTDVARRIFAMVDLPDVVSWNTLITGCVVQGHVAD 460
Query: 316 AVNL---FKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTS 372
A L ++L + V PN TL T L CA L + ++GKEI Y V + L+++ V ++
Sbjct: 461 AFQLAREMQQLEEGGVVPNAITLMTLLPGCAILAAPARGKEIHGYAVRHALDTDVAVGSA 520
Query: 373 LIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKP 432
L+ M++KCG + ++ VF+R+P ++ W+ +I Y +HG+G +A LF +M +P
Sbjct: 521 LVDMYAKCGCLALSRAVFDRLPRRNTITWNVLIMAYGMHGLGGEATVLFDRMTASGEARP 580
Query: 433 DAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKT 492
+ V + + L+ACSHSGMVD GL F +M+ + G+EP+ + C+VD+LGRAGR D A
Sbjct: 581 NEVTFMAALAACSHSGMVDRGLQLFHAMERDHGVEPTPDILACVVDILGRAGRLDEAYAM 640
Query: 493 IHEMPV-EVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGM 551
+ M E Q W+ +L AC H NV LGE A + LL L P +Y+L+ N++++AG
Sbjct: 641 VTSMEAGEQQVSAWSTMLGACRLHRNVHLGEIAGERLLELEPEEASHYVLLCNIYSAAGQ 700
Query: 552 WKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKELHIKLLE 611
W AA R M R + KEPG S +E+DG++ F+AG+ +H S ++ ++ L +++
Sbjct: 701 WTRAAEVRSRMRRRGVAKEPGCSWIEVDGAIHRFMAGESAHPASEEVHAHMEALWGEMVA 760
Query: 612 AGYIAEADIV 621
GY + V
Sbjct: 761 RGYTPDTSCV 770
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 116/424 (27%), Positives = 215/424 (50%), Gaps = 14/424 (3%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
M+ +G F+E + T M+ GV + TF L AC+ + + G+ +H++V+K
Sbjct: 242 MVSVLVQSGMFDEAVQTLYDMVALGVRPDGVTFASALPACSRLELLDVGREMHAYVIKDD 301
Query: 61 -FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAIL 119
++FV + L+DMY+ +R+V D +P + + WN++I +++A +++EA+
Sbjct: 302 ELAANSFVASALVDMYATHEQVGKARQVFDMVPDSGKQLGMWNAMICGYAQAGMDEEALR 361
Query: 120 VLKEMWV-LGLELSASTFVSVVSGCSFRQGI----SMHCCVYKLGLLNNEIPLANSVMSM 174
+ M G +T SV+ C+ + ++H V K G+ N + N++M M
Sbjct: 362 LFARMEAEAGFVPCETTMASVLPACARSEAFAGKEAVHGYVVKRGMAGNRF-VQNALMDM 420
Query: 175 YAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRM---SVTPDL 231
YA+ GK + AR IF + +VSW T+I G V G+V +AF L +M+++ V P+
Sbjct: 421 YARLGKTDVARRIFAMVDLPDVVSWNTLITGCVVQGHVADAFQLAREMQQLEEGGVVPNA 480
Query: 232 VVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDA 291
+ + L+ GCA + +H ++ + + + + LV MY KCG L L+R VFD
Sbjct: 481 ITLMTLLPGCAILAAPARGKEIHGYAVRHALDTDVAVGSALVDMYAKCGCLALSRAVFDR 540
Query: 292 VLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTS-VRPNEATLATTLSACAELGSLSK 350
+ ++ W +I Y G EA LF R+ + RPNE T L+AC+ G + +
Sbjct: 541 LPRRNTITWNVLIMAYGMHGLGGEATVLFDRMTASGEARPNEVTFMAALAACSHSGMVDR 600
Query: 351 GKEIEEYIVLN-GLESNRQVQTSLIHMFSKCGRINKAKEVFERVP--DKDLAVWSAMING 407
G ++ + + G+E + ++ + + GR+++A + + ++ ++ WS M+
Sbjct: 601 GLQLFHAMERDHGVEPTPDILACVVDILGRAGRLDEAYAMVTSMEAGEQQVSAWSTMLGA 660
Query: 408 YAIH 411
+H
Sbjct: 661 CRLH 664
Score = 176 bits (447), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 134/468 (28%), Positives = 224/468 (47%), Gaps = 27/468 (5%)
Query: 2 IRNSTNNGSFEETLSTYSS--MLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKV 59
+R+ T G+ L SS M + P +K+ A + + +H+ L+
Sbjct: 27 VRSLTAAGNHAAALRALSSITMASPQQQLDHSALPPAIKSAAALRDARSARAIHAAALRR 86
Query: 60 GF--QQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLN--- 114
G + V L+ Y++C ++ +V + VS+NS+ISA CL
Sbjct: 87 GLLHRPSPAVANALLTAYARCGRLAAALEVFGSISDSAHDAVSFNSLISA---LCLFRRW 143
Query: 115 DEAILVLKEMWVLGLELSASTFVSVVSGCS--------FRQGISMHCCVYKLGLLNNEIP 166
D A+ L+ M G L++ T VSV+ S R G H K GLL+
Sbjct: 144 DHALAALRAMLAGGHPLTSFTLVSVLRAVSHLPAAAAAVRLGREAHAFALKNGLLHGHQR 203
Query: 167 LA-NSVMSMYAKFGKVNEARSIF--DEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMR 223
A N+++SMYA+ G V +A+ +F G +V+W T++ V G +EA M
Sbjct: 204 FAFNALLSMYARLGLVADAQRLFAGATPGRGDVVTWNTMVSVLVQSGMFDEAVQTLYDMV 263
Query: 224 RMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDP-LDNLLVSMYTKCGDL 282
+ V PD V F + + C+++ L + MH+ ++K + + + LV MY +
Sbjct: 264 ALGVRPDGVTFASALPACSRLELLDVGREMHAYVIKDDELAANSFVASALVDMYATHEQV 323
Query: 283 ELARRVFDAVLE--KSVFLWTSMIGGYAQLGYPSEAVNLFKRL-LKTSVRPNEATLATTL 339
AR+VFD V + K + +W +MI GYAQ G EA+ LF R+ + P E T+A+ L
Sbjct: 324 GKARQVFDMVPDSGKQLGMWNAMICGYAQAGMDEEALRLFARMEAEAGFVPCETTMASVL 383
Query: 340 SACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLA 399
ACA + + + + Y+V G+ NR VQ +L+ M+++ G+ + A+ +F V D+
Sbjct: 384 PACARSEAFAGKEAVHGYVVKRGMAGNRFVQNALMDMYARLGKTDVARRIFAMVDLPDVV 443
Query: 400 VWSAMINGYAIHGMGDQALNLFYKMQHVE--GLKPDAVVYTSILSACS 445
W+ +I G + G A L +MQ +E G+ P+A+ ++L C+
Sbjct: 444 SWNTLITGCVVQGHVADAFQLAREMQQLEEGGVVPNAITLMTLLPGCA 491
>gi|48475086|gb|AAT44155.1| hypothetical protein, contains pentrtricopeptide (PPR) repeat
[Oryza sativa Japonica Group]
gi|125568883|gb|EAZ10398.1| hypothetical protein OsJ_00231 [Oryza sativa Japonica Group]
Length = 836
Score = 324 bits (830), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 187/650 (28%), Positives = 325/650 (50%), Gaps = 74/650 (11%)
Query: 11 FEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTG 70
++E ++ + M GV + +T VL AC ++ +G+ VH++ LK+ V
Sbjct: 137 WDEAIAVFREMQARGVPADGYTCARVLHACGRAGALREGRAVHAYALKLALDAHPLVPGF 196
Query: 71 LIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLE 130
L MY++ +D ++ +VLD M SVV WN++++ +R L D+A+ + M G E
Sbjct: 197 LAGMYAENADVAAATRVLDAMGAG--SVVPWNAVVACCARLGLVDDALELAARMSRSGPE 254
Query: 131 LSASTFVSVVSGCS---------------------------------------FRQGISM 151
+ +T+ +V+SGCS R G+ +
Sbjct: 255 PNVATWNTVLSGCSRHGRDREALGVVASMLKQGLRPDATTVSSLLKSVANTGLLRHGMEI 314
Query: 152 HCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGN 211
HC + L ++ +++ MYAK G+++ A+ + D + ++ +W +++ GY N G
Sbjct: 315 HC-FFLRNQLEPDVYTGTALVDMYAKCGRLDCAQKVLDALEHRNLTTWNSLVAGYANAGR 373
Query: 212 VNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNL 271
+ A L M++ + PD+ + LI G + G S ++LL
Sbjct: 374 FDIALELVELMKKNRLDPDITTWNGLITGYSMNGQ-----SSQAVLL------------- 415
Query: 272 LVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPN 331
R++ A + +V WTS+I G G ++ + K V+P+
Sbjct: 416 -------------LRQIKAAGVTPNVVSWTSLISGSCHNGEYEDSFYFCHEMQKDGVQPS 462
Query: 332 EATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFE 391
T++ L ACA L KGKE+ + + + + V T+LI M+SK G + AK +FE
Sbjct: 463 LVTMSVLLRACAGLALQKKGKELHCFALRRAYDCDMVVSTALIDMYSKGGSLVSAKVIFE 522
Query: 392 RVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVD 451
+ K+L + +AM+ G A+HG G +A+ LF+ M + GLKPD++ +T++L+AC G+V
Sbjct: 523 SIQQKNLVLCNAMLTGLAVHGQGREAIELFHDMWN-SGLKPDSITFTALLTACRSMGLVT 581
Query: 452 DGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSA 511
+G +F SM++ +G++P+ E+Y C+VDLL R G D A+ I P++ A W LL+
Sbjct: 582 EGWEYFDSMETKYGVKPTTENYACMVDLLARCGYLDEAMDFIERSPIDPGASHWGALLTG 641
Query: 512 CMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEP 571
C H N+ L E AA+NL L P ++ NY+LM NL+ M+ EA + + M R + P
Sbjct: 642 CSIHGNLALAEVAARNLFILEPYNSANYLLMMNLYEYERMYDEAESLKYAMKARGVDSRP 701
Query: 572 GWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKELHIKLLEAGYIAEADIV 621
GWS ++I+ + VF + H + +I + L L ++ +AGY+ + +
Sbjct: 702 GWSWIQIEQGIHVFEVDGKPHPETAEIYEELIRLVFQIKKAGYVPDTSCI 751
Score = 166 bits (420), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 103/418 (24%), Positives = 206/418 (49%), Gaps = 40/418 (9%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
++ + +G E L +SML+ G+ ++ T +LK+ AN + G +H L+
Sbjct: 263 VLSGCSRHGRDREALGVVASMLKQGLRPDATTVSSLLKSVANTGLLRHGMEIHCFFLRNQ 322
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+ D + T L+DMY+KC ++KVLD + R++ +WNS+++ ++ A D A+ +
Sbjct: 323 LEPDVYTGTALVDMYAKCGRLDCAQKVLDAL--EHRNLTTWNSLVAGYANAGRFDIALEL 380
Query: 121 LKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGK 180
++ M K L+ +I N +++ Y+ G+
Sbjct: 381 VELM--------------------------------KKNRLDPDITTWNGLITGYSMNGQ 408
Query: 181 VNEARSIFDEIGET----SIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
++A + +I ++VSWT++I G + G ++F C++M++ V P LV
Sbjct: 409 SSQAVLLLRQIKAAGVTPNVVSWTSLISGSCHNGEYEDSFYFCHEMQKDGVQPSLVTMSV 468
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
L+ CA + +H L+ Y+ + + L+ MY+K G L A+ +F+++ +K+
Sbjct: 469 LLRACAGLALQKKGKELHCFALRRAYDCDMVVSTALIDMYSKGGSLVSAKVIFESIQQKN 528
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEE 356
+ L +M+ G A G EA+ LF + + ++P+ T L+AC +G +++G E +
Sbjct: 529 LVLCNAMLTGLAVHGQGREAIELFHDMWNSGLKPDSITFTALLTACRSMGLVTEGWEYFD 588
Query: 357 YIVLN-GLESNRQVQTSLIHMFSKCGRINKAKEVFERVP-DKDLAVWSAMINGYAIHG 412
+ G++ + ++ + ++CG +++A + ER P D + W A++ G +IHG
Sbjct: 589 SMETKYGVKPTTENYACMVDLLARCGYLDEAMDFIERSPIDPGASHWGALLTGCSIHG 646
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 95/424 (22%), Positives = 169/424 (39%), Gaps = 88/424 (20%)
Query: 132 SASTFVSVVSGCS------------FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFG 179
SA VS++ C+ R +H + GL + + + +++ + A+ G
Sbjct: 43 SAGVLVSLLRDCADLHGDDTDHRVARRLAPQLHSLAVRTGL-SRDPRVTCALVDLLARLG 101
Query: 180 KVNEARSIFDEIGE---TSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
+ + E E V W + +EA + +M+ V D
Sbjct: 102 RGPSCARLLHEAAEDGAKDAVLWNKHVAMLAEAEEWDEAIAVFREMQARGVPADGYTCAR 161
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
++ C + G L ++H+ LK + + L MY + D+ A RV DA+ S
Sbjct: 162 VLHACGRAGALREGRAVHAYALKLALDAHPLVPGFLAGMYAENADVAAATRVLDAMGAGS 221
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSAC-------------- 342
V W +++ A+LG +A+ L R+ ++ PN AT T LS C
Sbjct: 222 VVPWNAVVACCARLGLVDDALELAARMSRSGPEPNVATWNTVLSGCSRHGRDREALGVVA 281
Query: 343 ---------------------AELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCG 381
A G L G EI + + N LE + T+L+ M++KCG
Sbjct: 282 SMLKQGLRPDATTVSSLLKSVANTGLLRHGMEIHCFFLRNQLEPDVYTGTALVDMYAKCG 341
Query: 382 RINKAKEVFERVP-----------------------------------DKDLAVWSAMIN 406
R++ A++V + + D D+ W+ +I
Sbjct: 342 RLDCAQKVLDALEHRNLTTWNSLVAGYANAGRFDIALELVELMKKNRLDPDITTWNGLIT 401
Query: 407 GYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGI 466
GY+++G QA+ L +++ G+ P+ V +TS++S H+G +D F MQ + G+
Sbjct: 402 GYSMNGQSSQAVLLLRQIK-AAGVTPNVVSWTSLISGSCHNGEYEDSFYFCHEMQKD-GV 459
Query: 467 EPSI 470
+PS+
Sbjct: 460 QPSL 463
>gi|215768832|dbj|BAH01061.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 842
Score = 324 bits (830), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 187/650 (28%), Positives = 325/650 (50%), Gaps = 74/650 (11%)
Query: 11 FEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTG 70
++E ++ + M GV + +T VL AC ++ +G+ VH++ LK+ V
Sbjct: 137 WDEAIAVFREMQARGVPADGYTCARVLHACGRAGALREGRAVHAYALKLALDAHPLVPGF 196
Query: 71 LIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLE 130
L MY++ +D ++ +VLD M SVV WN++++ +R L D+A+ + M G E
Sbjct: 197 LAGMYAENADVAAATRVLDAMGAG--SVVPWNAVVACCARLGLVDDALELAARMSRSGPE 254
Query: 131 LSASTFVSVVSGCS---------------------------------------FRQGISM 151
+ +T+ +V+SGCS R G+ +
Sbjct: 255 PNVATWNTVLSGCSRHGRDREALGVVASMLKQGLRPDATTVSSLLKSVANTGLLRHGMEI 314
Query: 152 HCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGN 211
HC + L ++ +++ MYAK G+++ A+ + D + ++ +W +++ GY N G
Sbjct: 315 HC-FFLRNQLEPDVYTGTALVDMYAKCGRLDCAQKVLDALEHRNLTTWNSLVAGYANAGR 373
Query: 212 VNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNL 271
+ A L M++ + PD+ + LI G + G S ++LL
Sbjct: 374 FDIALELVELMKKNRLDPDITTWNGLITGYSMNGQ-----SSQAVLL------------- 415
Query: 272 LVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPN 331
R++ A + +V WTS+I G G ++ + K V+P+
Sbjct: 416 -------------LRQIKAAGVTPNVVSWTSLISGSCHNGEYEDSFYFCHEMQKDGVQPS 462
Query: 332 EATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFE 391
T++ L ACA L KGKE+ + + + + V T+LI M+SK G + AK +FE
Sbjct: 463 LVTMSVLLRACAGLALQKKGKELHCFALRRAYDCDMVVSTALIDMYSKGGSLVSAKVIFE 522
Query: 392 RVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVD 451
+ K+L + +AM+ G A+HG G +A+ LF+ M + GLKPD++ +T++L+AC G+V
Sbjct: 523 SIQQKNLVLCNAMLTGLAVHGQGREAIELFHDMWN-SGLKPDSITFTALLTACRSMGLVT 581
Query: 452 DGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSA 511
+G +F SM++ +G++P+ E+Y C+VDLL R G D A+ I P++ A W LL+
Sbjct: 582 EGWEYFDSMETKYGVKPTTENYACMVDLLARCGYLDEAMDFIERSPIDPGASHWGALLTG 641
Query: 512 CMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEP 571
C H N+ L E AA+NL L P ++ NY+LM NL+ M+ EA + + M R + P
Sbjct: 642 CSIHGNLALAEVAARNLFILEPYNSANYLLMMNLYEYERMYDEAESLKYAMKARGVDSRP 701
Query: 572 GWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKELHIKLLEAGYIAEADIV 621
GWS ++I+ + VF + H + +I + L L ++ +AGY+ + +
Sbjct: 702 GWSWIQIEQGIHVFEVDGKPHPETAEIYEELIRLVFQIKKAGYVPDTSCI 751
Score = 166 bits (420), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 103/418 (24%), Positives = 206/418 (49%), Gaps = 40/418 (9%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
++ + +G E L +SML+ G+ ++ T +LK+ AN + G +H L+
Sbjct: 263 VLSGCSRHGRDREALGVVASMLKQGLRPDATTVSSLLKSVANTGLLRHGMEIHCFFLRNQ 322
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+ D + T L+DMY+KC ++KVLD + R++ +WNS+++ ++ A D A+ +
Sbjct: 323 LEPDVYTGTALVDMYAKCGRLDCAQKVLDAL--EHRNLTTWNSLVAGYANAGRFDIALEL 380
Query: 121 LKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGK 180
++ M K L+ +I N +++ Y+ G+
Sbjct: 381 VELM--------------------------------KKNRLDPDITTWNGLITGYSMNGQ 408
Query: 181 VNEARSIFDEIGET----SIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
++A + +I ++VSWT++I G + G ++F C++M++ V P LV
Sbjct: 409 SSQAVLLLRQIKAAGVTPNVVSWTSLISGSCHNGEYEDSFYFCHEMQKDGVQPSLVTMSV 468
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
L+ CA + +H L+ Y+ + + L+ MY+K G L A+ +F+++ +K+
Sbjct: 469 LLRACAGLALQKKGKELHCFALRRAYDCDMVVSTALIDMYSKGGSLVSAKVIFESIQQKN 528
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEE 356
+ L +M+ G A G EA+ LF + + ++P+ T L+AC +G +++G E +
Sbjct: 529 LVLCNAMLTGLAVHGQGREAIELFHDMWNSGLKPDSITFTALLTACRSMGLVTEGWEYFD 588
Query: 357 YIVLN-GLESNRQVQTSLIHMFSKCGRINKAKEVFERVP-DKDLAVWSAMINGYAIHG 412
+ G++ + ++ + ++CG +++A + ER P D + W A++ G +IHG
Sbjct: 589 SMETKYGVKPTTENYACMVDLLARCGYLDEAMDFIERSPIDPGASHWGALLTGCSIHG 646
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 95/424 (22%), Positives = 169/424 (39%), Gaps = 88/424 (20%)
Query: 132 SASTFVSVVSGCS------------FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFG 179
SA VS++ C+ R +H + GL + + + +++ + A+ G
Sbjct: 43 SAGVLVSLLRDCADLHGDDTDHRVARRLAPQLHSLAVRTGL-SRDPRVTCALVDLLARLG 101
Query: 180 KVNEARSIFDEIGE---TSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
+ + E E V W + +EA + +M+ V D
Sbjct: 102 RGPSCARLLHEAAEDGAKDAVLWNKHVAMLAEAEEWDEAIAVFREMQARGVPADGYTCAR 161
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
++ C + G L ++H+ LK + + L MY + D+ A RV DA+ S
Sbjct: 162 VLHACGRAGALREGRAVHAYALKLALDAHPLVPGFLAGMYAENADVAAATRVLDAMGAGS 221
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSAC-------------- 342
V W +++ A+LG +A+ L R+ ++ PN AT T LS C
Sbjct: 222 VVPWNAVVACCARLGLVDDALELAARMSRSGPEPNVATWNTVLSGCSRHGRDREALGVVA 281
Query: 343 ---------------------AELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCG 381
A G L G EI + + N LE + T+L+ M++KCG
Sbjct: 282 SMLKQGLRPDATTVSSLLKSVANTGLLRHGMEIHCFFLRNQLEPDVYTGTALVDMYAKCG 341
Query: 382 RINKAKEVFERVP-----------------------------------DKDLAVWSAMIN 406
R++ A++V + + D D+ W+ +I
Sbjct: 342 RLDCAQKVLDALEHRNLTTWNSLVAGYANAGRFDIALELVELMKKNRLDPDITTWNGLIT 401
Query: 407 GYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGI 466
GY+++G QA+ L +++ G+ P+ V +TS++S H+G +D F MQ + G+
Sbjct: 402 GYSMNGQSSQAVLLLRQIK-AAGVTPNVVSWTSLISGSCHNGEYEDSFYFCHEMQKD-GV 459
Query: 467 EPSI 470
+PS+
Sbjct: 460 QPSL 463
>gi|297833632|ref|XP_002884698.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330538|gb|EFH60957.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 685
Score = 324 bits (830), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 170/525 (32%), Positives = 295/525 (56%), Gaps = 6/525 (1%)
Query: 101 WNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCSF----RQGISMHCCVY 156
+N++I+ L E + + + GL L TF V+ C+ + GI +H V
Sbjct: 79 YNTLINGFVNNHLFHETLDLFLSIRKHGLNLHGFTFPLVLKACTRASNRKLGIDLHSLVV 138
Query: 157 KLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAF 216
K G N+++ S++S+Y+ G++N+A +F+EI E S+V+WT + GY G EA
Sbjct: 139 KCGF-NHDVAAMTSLLSIYSGSGRLNDAHKVFEEIPERSVVTWTALFSGYTTAGKHREAI 197
Query: 217 GLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMY 276
L +M M V PD + ++ C VG+L + + + + LV++Y
Sbjct: 198 DLFKKMVEMGVRPDSYFIVQVLSACVHVGDLDSGEWIVKHMEEMEMQKNSFVRTTLVNLY 257
Query: 277 TKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLA 336
KCG +E AR VFD++ EK + W++MI GYA +P E + F ++L+ +++P++ ++
Sbjct: 258 AKCGKMEKARSVFDSMGEKDIVTWSTMIQGYASNSFPKEGIEFFLQMLQENLKPDQFSIV 317
Query: 337 TTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDK 396
LS+CA LG+L G+ I + +N + +LI M++KCG + + EVF+ + +K
Sbjct: 318 GFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMKEK 377
Query: 397 DLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSF 456
D+ + +A I+G A +G + +F + + + G+ PD + +L C H+G++ DGL F
Sbjct: 378 DIVIMNAAISGLAKNGHVKLSFAVFGQTEKL-GISPDGSTFLGLLCGCVHAGLIQDGLRF 436
Query: 457 FKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHH 516
F ++ + ++ ++EHY C+VDL GRAG D A + I +MP+ A VW LLS C
Sbjct: 437 FNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALLSGCRLVK 496
Query: 517 NVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQV 576
+ +L E K L+ L P + GNY+ ++N+++ +G W EAA R +M+ + + K PG+S +
Sbjct: 497 DTQLAETVLKELIALEPWNAGNYVQLSNIYSVSGRWDEAAEVRDMMNRKGMKKIPGYSWI 556
Query: 577 EIDGSVQVFVAGDRSHHLSVDIRKTLKELHIKLLEAGYIAEADIV 621
E++G+V F+A D+SH LS I L++L ++ G++ + V
Sbjct: 557 ELEGTVHEFLADDKSHPLSDKIYAKLEDLGNEMRLMGFVPTTEFV 601
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 134/494 (27%), Positives = 231/494 (46%), Gaps = 45/494 (9%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+I NN F ETL + S+ + G++ + FTFPLVLKAC ++ G +HS V+K G
Sbjct: 82 LINGFVNNHLFHETLDLFLSIRKHGLNLHGFTFPLVLKACTRASNRKLGIDLHSLVVKCG 141
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F D T L+ +YS + KV +E+P RSVV+W ++ S ++ A + EAI +
Sbjct: 142 FNHDVAAMTSLLSIYSGSGRLNDAHKVFEEIPE--RSVVTWTALFSGYTTAGKHREAIDL 199
Query: 121 LKEMWVLGLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
K+M +G+ + V V+S C G + + ++ + N + +++++YA
Sbjct: 200 FKKMVEMGVRPDSYFIVQVLSACVHVGDLDSGEWIVKHMEEMEMQKNSF-VRTTLVNLYA 258
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K GK+ +ARS+FD +GE IV+W+T+I GY + E QM + ++ PD +
Sbjct: 259 KCGKMEKARSVFDSMGEKDIVTWSTMIQGYASNSFPKEGIEFFLQMLQENLKPDQFSIVG 318
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
+ CA +G L L SL+ + + + N L+ MY KCG + VF + EK
Sbjct: 319 FLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMKEKD 378
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEE 356
+ + + I G A+ G+ + +F + K + P+ +T L C G + G
Sbjct: 379 IVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGLIQDG----- 433
Query: 357 YIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQ 416
+ F+ + K E + M++ + GM D
Sbjct: 434 -----------------LRFFNAISCVYALKRTVEH--------YGCMVDLWGRAGMLDD 468
Query: 417 ALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEP-SIEHYLC 475
A L M ++P+A+V+ ++LS C +V D ++ +EP + +Y+
Sbjct: 469 AYRLICDMP----MRPNAIVWGALLSGCR---LVKDTQLAETVLKELIALEPWNAGNYVQ 521
Query: 476 LVDLLGRAGRFDLA 489
L ++ +GR+D A
Sbjct: 522 LSNIYSVSGRWDEA 535
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 89/293 (30%), Positives = 161/293 (54%), Gaps = 1/293 (0%)
Query: 161 LNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCN 220
L+++ L N ++ F + + + +F +I + T+I G+VN +E L
Sbjct: 41 LHHDTFLVNLLLKRTLFFRQTHYSFLLFSHTQFPNIFLYNTLINGFVNNHLFHETLDLFL 100
Query: 221 QMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCG 280
+R+ + F ++ C + N L + +HSL++K G+N++ L+S+Y+ G
Sbjct: 101 SIRKHGLNLHGFTFPLVLKACTRASNRKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSG 160
Query: 281 DLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLS 340
L A +VF+ + E+SV WT++ GY G EA++LFK++++ VRP+ + LS
Sbjct: 161 RLNDAHKVFEEIPERSVVTWTALFSGYTTAGKHREAIDLFKKMVEMGVRPDSYFIVQVLS 220
Query: 341 ACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAV 400
AC +G L G+ I +++ ++ N V+T+L+++++KCG++ KA+ VF+ + +KD+
Sbjct: 221 ACVHVGDLDSGEWIVKHMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMGEKDIVT 280
Query: 401 WSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDG 453
WS MI GYA + + + F +M E LKPD LS+C+ G +D G
Sbjct: 281 WSTMIQGYASNSFPKEGIEFFLQMLQ-ENLKPDQFSIVGFLSSCASLGALDLG 332
>gi|449520543|ref|XP_004167293.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g68930-like [Cucumis
sativus]
Length = 695
Score = 323 bits (829), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 190/597 (31%), Positives = 305/597 (51%), Gaps = 47/597 (7%)
Query: 29 NSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVL 88
+SF +L A + D + + +LK +D F L+ Y+K + +
Sbjct: 57 DSFLHNQLLHLYAKFGKLRDAQNLFDKMLK----RDXFSWNALLSAYAKSGSIQNLKATF 112
Query: 89 DEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCS---- 144
D MP R VS+N+ I+ S E++ + K M G E + T VS+++ +
Sbjct: 113 DRMP--FRDSVSYNTTIAGFSGNSCPQESLELFKRMQREGFEPTEYTIVSILNASAQLLD 170
Query: 145 FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIG 204
R G +H + L N + + N++ MYAK G++ +AR +FD + + ++VSW +I
Sbjct: 171 LRYGKQIHGSIIVRNFLGN-VFIWNALTDMYAKCGEIEQARWLFDCLTKKNLVSWNLMIS 229
Query: 205 GYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNN 264
GY G + GL +QMR PD V
Sbjct: 230 GYAKNGQPEKCIGLLHQMRLSGHMPDQVTM------------------------------ 259
Query: 265 EDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLL 324
+ +++ Y +CG ++ ARRVF EK + WT+M+ GYA+ G +A+ LF +L
Sbjct: 260 -----STIIAAYCQCGRVDEARRVFSEFKEKDIVCWTAMMVGYAKNGREEDALLLFNEML 314
Query: 325 KTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRIN 384
+ P+ TL++ +S+CA+L SL G+ + +L GL +N V ++LI M+SKCG I+
Sbjct: 315 LEHIEPDSYTLSSVVSSCAKLASLHHGQAVHGKSILAGLNNNLLVSSALIDMYSKCGFID 374
Query: 385 KAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSAC 444
A+ VF +P +++ W+AMI G A +G AL LF M + KPD V + ILSAC
Sbjct: 375 DARSVFNLMPTRNVVSWNAMIVGCAQNGHDKDALELFENMLQ-QKFKPDNVTFIGILSAC 433
Query: 445 SHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQV 504
H ++ G +F S+ + G+ P+++HY C+V+LLGR GR + A+ I M + +
Sbjct: 434 LHCNWIEQGQEYFDSISNQHGMTPTLDHYACMVNLLGRTGRIEQAVALIKNMAHDPDFLI 493
Query: 505 WAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDD 564
W+ LLS C ++ E AA++L L+P YI+++N++ S G WK+ A+ R LM
Sbjct: 494 WSTLLSICSTKGDIVNAEVAARHLFELDPTIAVPYIMLSNMYASMGRWKDVASVRNLMKS 553
Query: 565 RRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKELHIKLLEAGYIAEADIV 621
+ + K G+S +EID V F + DR+H S DI + L L KL E G+ ++V
Sbjct: 554 KNVKKFAGFSWIEIDNEVHRFTSEDRTHPESEDIYEKLNMLIGKLQEEGFTPNTNLV 610
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 110/439 (25%), Positives = 208/439 (47%), Gaps = 39/439 (8%)
Query: 6 TNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDA 65
+ N +E+L + M + G +T +L A A + + GK++H ++ F +
Sbjct: 131 SGNSCPQESLELFKRMQREGFEPTEYTIVSILNASAQLLDLRYGKQIHGSIIVRNFLGNV 190
Query: 66 FVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMW 125
F+ L DMY+KC + +R + D + +++VSWN +IS +++ ++ I +L +M
Sbjct: 191 FIWNALTDMYAKCGEIEQARWLFDCLTK--KNLVSWNLMISGYAKNGQPEKCIGLLHQMR 248
Query: 126 VLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEAR 185
+ G T ++++ Y + G+V+EAR
Sbjct: 249 LSGHMPDQVTMSTIIAA--------------------------------YCQCGRVDEAR 276
Query: 186 SIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVG 245
+F E E IV WT ++ GY G +A L N+M + PD +++ CA++
Sbjct: 277 RVFSEFKEKDIVCWTAMMVGYAKNGREEDALLLFNEMLLEHIEPDSYTLSSVVSSCAKLA 336
Query: 246 NLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIG 305
+L ++H + +G NN + + L+ MY+KCG ++ AR VF+ + ++V W +MI
Sbjct: 337 SLHHGQAVHGKSILAGLNNNLLVSSALIDMYSKCGFIDDARSVFNLMPTRNVVSWNAMIV 396
Query: 306 GYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIV-LNGLE 364
G AQ G+ +A+ LF+ +L+ +P+ T LSAC + +G+E + I +G+
Sbjct: 397 GCAQNGHDKDALELFENMLQQKFKPDNVTFIGILSACLHCNWIEQGQEYFDSISNQHGMT 456
Query: 365 SNRQVQTSLIHMFSKCGRINKAKEVFERVP-DKDLAVWSAMINGYAIHGMGDQALNLFYK 423
++++ + GRI +A + + + D D +WS +++ + G +N
Sbjct: 457 PTLDHYACMVNLLGRTGRIEQAVALIKNMAHDPDFLIWSTLLSICSTKG---DIVNAEVA 513
Query: 424 MQHVEGLKPDAVVYTSILS 442
+H+ L P V +LS
Sbjct: 514 ARHLFELDPTIAVPYIMLS 532
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 57/252 (22%), Positives = 109/252 (43%), Gaps = 42/252 (16%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
M+ NG E+ L ++ ML + +S+T V+ +CA + S+ G+ VH + G
Sbjct: 293 MMVGYAKNGREEDALLLFNEMLLEHIEPDSYTLSSVVSSCAKLASLHHGQAVHGKSILAG 352
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+ V + LIDMYSKC +R V + MP R+VVSWN++I ++ + +A+ +
Sbjct: 353 LNNNLLVSSALIDMYSKCGFIDDARSVFNLMPT--RNVVSWNAMIVGCAQNGHDKDALEL 410
Query: 121 LKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGK 180
+ M + TF+ ++S C +HC
Sbjct: 411 FENMLQQKFKPDNVTFIGILSAC-------LHC-------------------------NW 438
Query: 181 VNEARSIFDEIGET-----SIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFL 235
+ + + FD I ++ + ++ G + +A L ++ M+ PD +++
Sbjct: 439 IEQGQEYFDSISNQHGMTPTLDHYACMVNLLGRTGRIEQAVAL---IKNMAHDPDFLIWS 495
Query: 236 NLILGCAQVGNL 247
L+ C+ G++
Sbjct: 496 TLLSICSTKGDI 507
>gi|125527494|gb|EAY75608.1| hypothetical protein OsI_03512 [Oryza sativa Indica Group]
Length = 608
Score = 323 bits (829), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 183/562 (32%), Positives = 297/562 (52%), Gaps = 38/562 (6%)
Query: 71 LIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLE 130
L D+ S S ++R + D +P ++ ++ISA SR C + E + + G +
Sbjct: 25 LHDLLSDASTSRAARHLFDAVPRPTPALC--GTLISALSRLCSHQELLDAFSSLHRRGSD 82
Query: 131 LSASTFVSVVSGCSF----RQGISMHCCVYKLGLLN------------------------ 162
+ VV C+ RQG +HC GLL
Sbjct: 83 VPPGCVPLVVKSCAILAASRQGKQVHCHAIVRGLLGDIFVQTALVDFYAKNGDMDCAVKV 142
Query: 163 -NEIPLA-----NSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAF 216
+E+P+ N +++ Y+K G V +AR +FD + + SW ++I Y + G EA
Sbjct: 143 FDEMPVKDPIPMNCLITGYSKSGDVVKARRLFDGMVRRTSASWNSMIACYAHGGEYQEAL 202
Query: 217 GLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMY 276
L +M P+ + + CA+ G+L SL+ + N + L+ MY
Sbjct: 203 RLFRRMLSEGARPNAITIATMFSICAKTGDLETGKWARSLIAEQDLQNM-IVHTALMEMY 261
Query: 277 TKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLA 336
KC ++ ARR FD + ++ V W++MI GYAQ G P E++ LF+R+ TS +PNE TL
Sbjct: 262 VKCQAIDEARREFDRMQQRDVVAWSTMIAGYAQNGRPHESLELFERMKATSCKPNEVTLV 321
Query: 337 TTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDK 396
LSACA+LGS G +I ++ L + ++LI M++KCG + +A+ VF R+ K
Sbjct: 322 GVLSACAQLGSDELGGQIGSHVESQNLPLTSYLGSALIDMYTKCGHVGRARSVFNRMEHK 381
Query: 397 DLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSF 456
+ W++M+ G A++G A+ L+ +M E ++P+ + + ++L+AC+H+G+VD G+SF
Sbjct: 382 VVITWNSMMRGLALNGFAQDAITLYKEMTE-EDVQPNEITFVALLTACTHAGLVDQGMSF 440
Query: 457 FKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHH 516
FK M++ + P +EH C+VDLL ++GR A K I +M VE A +W+ LLSAC H
Sbjct: 441 FKEMKTIHHVSPQVEHCACIVDLLCKSGRLREAYKFICDMEVEPNAVIWSTLLSACRAHA 500
Query: 517 NVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQV 576
+VEL + AA LL L P ++ Y+L++N++ AG+W + R LM + + K +S +
Sbjct: 501 DVELAKLAASKLLVLEPDNSSIYVLLSNIYADAGLWGDVREIRDLMRSKNVQKLSAYSWI 560
Query: 577 EIDGSVQVFVAGDRSHHLSVDI 598
E+DG V F+ D H S +I
Sbjct: 561 ELDGEVHKFLVQDTYHPKSAEI 582
Score = 188 bits (478), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 122/438 (27%), Positives = 208/438 (47%), Gaps = 37/438 (8%)
Query: 10 SFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQT 69
S +E L +SS+ + G PLV+K+CA + + GK+VH H + G D FVQT
Sbjct: 65 SHQELLDAFSSLHRRGSDVPPGCVPLVVKSCAILAASRQGKQVHCHAIVRGLLGDIFVQT 124
Query: 70 GLIDMYSKCSDFVSSRKVLDEMPVR-----------------------------LRSVVS 100
L+D Y+K D + KV DEMPV+ R+ S
Sbjct: 125 ALVDFYAKNGDMDCAVKVFDEMPVKDPIPMNCLITGYSKSGDVVKARRLFDGMVRRTSAS 184
Query: 101 WNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVY 156
WNS+I+ ++ EA+ + + M G +A T ++ S C+ G +
Sbjct: 185 WNSMIACYAHGGEYQEALRLFRRMLSEGARPNAITIATMFSICAKTGDLETGKWARSLIA 244
Query: 157 KLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAF 216
+ L N + + ++M MY K ++EAR FD + + +V+W+T+I GY G +E+
Sbjct: 245 EQDLQN--MIVHTALMEMYVKCQAIDEARREFDRMQQRDVVAWSTMIAGYAQNGRPHESL 302
Query: 217 GLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMY 276
L +M+ S P+ V + ++ CAQ+G+ L + S + L + L+ MY
Sbjct: 303 ELFERMKATSCKPNEVTLVGVLSACAQLGSDELGGQIGSHVESQNLPLTSYLGSALIDMY 362
Query: 277 TKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLA 336
TKCG + AR VF+ + K V W SM+ G A G+ +A+ L+K + + V+PNE T
Sbjct: 363 TKCGHVGRARSVFNRMEHKVVITWNSMMRGLALNGFAQDAITLYKEMTEEDVQPNEITFV 422
Query: 337 TTLSACAELGSLSKGKE-IEEYIVLNGLESNRQVQTSLIHMFSKCGRINKA-KEVFERVP 394
L+AC G + +G +E ++ + + ++ + K GR+ +A K + +
Sbjct: 423 ALLTACTHAGLVDQGMSFFKEMKTIHHVSPQVEHCACIVDLLCKSGRLREAYKFICDMEV 482
Query: 395 DKDLAVWSAMINGYAIHG 412
+ + +WS +++ H
Sbjct: 483 EPNAVIWSTLLSACRAHA 500
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 102/210 (48%), Gaps = 7/210 (3%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI NG E+L + M T N T VL ACA + S G ++ SHV
Sbjct: 288 MIAGYAQNGRPHESLELFERMKATSCKPNEVTLVGVLSACAQLGSDELGGQIGSHVESQN 347
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+++ + LIDMY+KC +R V + M ++ V++WNS++ + +AI +
Sbjct: 348 LPLTSYLGSALIDMYTKCGHVGRARSVFNRMEHKV--VITWNSMMRGLALNGFAQDAITL 405
Query: 121 LKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
KEM ++ + TFV++++ C+ QG+S + + ++ ++ ++ +
Sbjct: 406 YKEMTEEDVQPNEITFVALLTACTHAGLVDQGMSFFKEMKTIHHVSPQVEHCACIVDLLC 465
Query: 177 KFGKVNEA-RSIFDEIGETSIVSWTTIIGG 205
K G++ EA + I D E + V W+T++
Sbjct: 466 KSGRLREAYKFICDMEVEPNAVIWSTLLSA 495
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 101/225 (44%), Gaps = 36/225 (16%)
Query: 260 SGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNL 319
+G PL +LL T AR +FDAV + L ++I ++L E ++
Sbjct: 17 AGLLKTRPLHDLLSDASTS----RAARHLFDAVPRPTPALCGTLISALSRLCSHQELLDA 72
Query: 320 FKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSK 379
F L + + + +CA L + +GK++ + ++ GL + VQT+L+ ++K
Sbjct: 73 FSSLHRRGSDVPPGCVPLVVKSCAILAASRQGKQVHCHAIVRGLLGDIFVQTALVDFYAK 132
Query: 380 CGRINKAKEVFERVPDKDL-------------------------------AVWSAMINGY 408
G ++ A +VF+ +P KD A W++MI Y
Sbjct: 133 NGDMDCAVKVFDEMPVKDPIPMNCLITGYSKSGDVVKARRLFDGMVRRTSASWNSMIACY 192
Query: 409 AIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDG 453
A G +AL LF +M EG +P+A+ ++ S C+ +G ++ G
Sbjct: 193 AHGGEYQEALRLFRRMLS-EGARPNAITIATMFSICAKTGDLETG 236
>gi|326507168|dbj|BAJ95661.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 580
Score = 323 bits (829), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 171/457 (37%), Positives = 266/457 (58%), Gaps = 4/457 (0%)
Query: 148 GISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEI--GETSIVSWTTIIGG 205
G +H KLGL ++ L N++++MY+ + ARS+ D G + VSW TII G
Sbjct: 112 GAQLHALSVKLGLSSDTFVL-NTLINMYSSCSYPSTARSVLDSAPKGASDTVSWNTIIAG 170
Query: 206 YVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNE 265
Y++ G N+A +QM + V D V LN ++ CA+ + + H+LL+ +G+
Sbjct: 171 YIHAGLPNKALQAFSQMAKGQVMLDDVTLLNALVACARTCMMKVGKLCHALLVTNGFEIN 230
Query: 266 DPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLK 325
+ + L+SMY KCG +E ARR+FD + +++ WTSMI GY QLG EA+ LF+ +
Sbjct: 231 CYMGSSLISMYAKCGQVEDARRIFDGMPDRNAVCWTSMISGYTQLGQSKEAIKLFRDMQI 290
Query: 326 TSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINK 385
V+ ++AT++T +S+C ++G+L G+ + Y ++GL + V+ SLI M+SKCG I K
Sbjct: 291 AGVKVDDATISTVVSSCGQMGALDLGRYVHAYCDIHGLGKDISVKNSLIDMYSKCGDIKK 350
Query: 386 AKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACS 445
A ++F + +D W+ +I G+A +G+ +AL+LF +M+ G+ P+ + + +L++CS
Sbjct: 351 AYDIFCGMVKRDNFSWT-VIMGFAANGLSGEALDLFAQMEEEGGVMPNEITFLGVLTSCS 409
Query: 446 HSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVW 505
H G+V+ G F M S +GI P IEHY C+VDLLGRA A + I EMP+ A +W
Sbjct: 410 HGGLVEQGYRHFHRMSSIYGIAPRIEHYGCMVDLLGRAKLLAEAEQFIKEMPIAPDAVMW 469
Query: 506 APLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDR 565
LL AC V L EY A+ + L P G +L++ ++ + W +A R +
Sbjct: 470 RSLLFACRTCGEVGLAEYVAERIQVLEPNKCGGDVLLSTVYATTSRWVDANKVRTGIYSG 529
Query: 566 RLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTL 602
R TK+PG S +E+DG V F AGD SH + I TL
Sbjct: 530 RKTKQPGCSFIEVDGCVHEFFAGDESHFETEAIYSTL 566
Score = 171 bits (434), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 114/418 (27%), Positives = 209/418 (50%), Gaps = 24/418 (5%)
Query: 29 NSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVL 88
++++ L A + S+ G ++H+ +K+G D FV LI+MYS CS ++R VL
Sbjct: 92 DNYSLSAALSTAARMPSVVVGAQLHALSVKLGLSSDTFVLNTLINMYSSCSYPSTARSVL 151
Query: 89 DEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCSFRQG 148
D P VSWN+II+ + A L ++A+ +M + L T ++ + C+
Sbjct: 152 DSAPKGASDTVSWNTIIAGYIHAGLPNKALQAFSQMAKGQVMLDDVTLLNALVACA---- 207
Query: 149 ISMHCCVYKLGLLNNEIPLAN----------SVMSMYAKFGKVNEARSIFDEIGETSIVS 198
C+ K+G L + + + N S++SMYAK G+V +AR IFD + + + V
Sbjct: 208 ---RTCMMKVGKLCHALLVTNGFEINCYMGSSLISMYAKCGQVEDARRIFDGMPDRNAVC 264
Query: 199 WTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLL 258
WT++I GY +G EA L M+ V D ++ C Q+G L L +H+
Sbjct: 265 WTSMISGYTQLGQSKEAIKLFRDMQIAGVKVDDATISTVVSSCGQMGALDLGRYVHAYCD 324
Query: 259 KSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVN 318
G + + N L+ MY+KCGD++ A +F ++++ F WT +I G+A G EA++
Sbjct: 325 IHGLGKDISVKNSLIDMYSKCGDIKKAYDIFCGMVKRDNFSWT-VIMGFAANGLSGEALD 383
Query: 319 LFKRLLKT-SVRPNEATLATTLSACAELGSLSKG-KEIEEYIVLNGLESNRQVQTSLIHM 376
LF ++ + V PNE T L++C+ G + +G + + G+ + ++ +
Sbjct: 384 LFAQMEEEGGVMPNEITFLGVLTSCSHGGLVEQGYRHFHRMSSIYGIAPRIEHYGCMVDL 443
Query: 377 FSKCGRINKAKEVFERVP-DKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPD 433
+ + +A++ + +P D +W +++ +A G+ L Y + ++ L+P+
Sbjct: 444 LGRAKLLAEAEQFIKEMPIAPDAVMWRSLL--FACRTCGEVGLAE-YVAERIQVLEPN 498
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/252 (28%), Positives = 127/252 (50%), Gaps = 13/252 (5%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+I + G + L +S M + V + T L ACA + GK H+ ++ G
Sbjct: 167 IIAGYIHAGLPNKALQAFSQMAKGQVMLDDVTLLNALVACARTCMMKVGKLCHALLVTNG 226
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F+ + ++ + LI MY+KC +R++ D MP R+ V W S+IS +++ + EAI +
Sbjct: 227 FEINCYMGSSLISMYAKCGQVEDARRIFDGMPD--RNAVCWTSMISGYTQLGQSKEAIKL 284
Query: 121 LKEMWVLGLELSASTFVSVVSGC------SFRQGISMHCCVYKLGLLNNEIPLANSVMSM 174
++M + G+++ +T +VVS C + + +C ++ LG +I + NS++ M
Sbjct: 285 FRDMQIAGVKVDDATISTVVSSCGQMGALDLGRYVHAYCDIHGLG---KDISVKNSLIDM 341
Query: 175 YAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRM-SVTPDLVV 233
Y+K G + +A IF + + SWT I+G N G EA L QM V P+ +
Sbjct: 342 YSKCGDIKKAYDIFCGMVKRDNFSWTVIMGFAAN-GLSGEALDLFAQMEEEGGVMPNEIT 400
Query: 234 FLNLILGCAQVG 245
FL ++ C+ G
Sbjct: 401 FLGVLTSCSHGG 412
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 59/251 (23%), Positives = 105/251 (41%), Gaps = 34/251 (13%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI T G +E + + M GV + T V+ +C + ++ G+ VH++ G
Sbjct: 268 MISGYTQLGQSKEAIKLFRDMQIAGVKVDDATISTVVSSCGQMGALDLGRYVHAYCDIHG 327
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+D V+ LIDMYSKC D + + M V+ R SW I+ + L+ EA+ +
Sbjct: 328 LGKDISVKNSLIDMYSKCGDIKKAYDIFCGM-VK-RDNFSWTVIMGFAANG-LSGEALDL 384
Query: 121 LKEMWVLGLELSAS-TFVSVVSGCSFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFG 179
+M G + TF+ V++ CS GL+ + + S+Y
Sbjct: 385 FAQMEEEGGVMPNEITFLGVLTSCSHG------------GLVEQGYRHFHRMSSIYGIAP 432
Query: 180 KVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLIL 239
++ + D +G +++ E F ++ M + PD V++ +L+
Sbjct: 433 RIEHYGCMVDLLGRAKLLAEA-------------EQF-----IKEMPIAPDAVMWRSLLF 474
Query: 240 GCAQVGNLFLA 250
C G + LA
Sbjct: 475 ACRTCGEVGLA 485
>gi|225454494|ref|XP_002276948.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01030,
mitochondrial-like [Vitis vinifera]
Length = 913
Score = 323 bits (829), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 196/650 (30%), Positives = 320/650 (49%), Gaps = 74/650 (11%)
Query: 11 FEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTG 70
++ + + M + + + T VL+AC + ++ K++H +V + G D +
Sbjct: 215 LQKGVELFRKMQFSFLKAETATIVRVLQACGKMGALNAAKQIHGYVFRFGLDSDVSLCNP 274
Query: 71 LIDMYSKCSDFVSSRKVLDEMPVRLRS--------------------------------- 97
LI MYSK +R+V D M R S
Sbjct: 275 LISMYSKNGKLELARRVFDSMENRNTSSWNSMISSYAALGFLNDAWSLFYELESSDMKPD 334
Query: 98 VVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCS----FRQGISMHC 153
+V+WN ++S H +E + +L+ M G + ++S+ SV+ S G H
Sbjct: 335 IVTWNCLLSGHFLHGYKEEVLNILQRMQGEGFKPNSSSMTSVLQAISELGFLNMGKETHG 394
Query: 154 CVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVN 213
V + G + ++ + S++ MY K + A+++FD + +I +W +++ GY G
Sbjct: 395 YVLRNGF-DCDVYVGTSLIDMYVKNHSLTSAQAVFDNMKNRNIFAWNSLVSGYSFKGMFE 453
Query: 214 EAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLV 273
+A L NQM + + PDLV + +I G A G
Sbjct: 454 DALRLLNQMEKEGIKPDLVTWNGMISGYAMWG---------------------------- 485
Query: 274 SMYTKCGDLELA--RRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPN 331
CG LA + L +V WT++I G +Q G +++ F ++ + V PN
Sbjct: 486 -----CGKEALAVLHQTKSLGLTPNVVSWTALISGSSQAGNNRDSLKFFAQMQQEGVMPN 540
Query: 332 EATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFE 391
A++ L ACA L L KGKEI + NG + V T+LI M+SK + A +VF
Sbjct: 541 SASITCLLRACASLSLLQKGKEIHCLSIRNGFIEDVFVATALIDMYSKSSSLKNAHKVFR 600
Query: 392 RVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVD 451
R+ +K LA W+ MI G+AI G+G +A+++F +MQ V G+ PDA+ +T++LSAC +SG++
Sbjct: 601 RIQNKTLASWNCMIMGFAIFGLGKEAISVFNEMQKV-GVGPDAITFTALLSACKNSGLIG 659
Query: 452 DGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSA 511
+G +F SM +++ I P +EHY C+VDLLGRAG D A IH MP++ A +W LL +
Sbjct: 660 EGWKYFDSMITDYRIVPRLEHYCCMVDLLGRAGYLDEAWDLIHTMPLKPDATIWGALLGS 719
Query: 512 CMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEP 571
C H N++ E AAKNL L P ++ NYILM NL++ W++ R LM +
Sbjct: 720 CRIHKNLKFAETAAKNLFKLEPNNSANYILMMNLYSIFNRWEDMDHLRELMGAAGVRNRQ 779
Query: 572 GWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKELHIKLLEAGYIAEADIV 621
WS ++I+ V VF + ++ H + I L +L ++ + GY+ + + V
Sbjct: 780 VWSWIQINQRVHVFSSDEKPHPDAGKIYFELYQLVSEMKKLGYVPDVNCV 829
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 112/484 (23%), Positives = 214/484 (44%), Gaps = 74/484 (15%)
Query: 9 GSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQ 68
GS L + + GV +S + + LK C + IW G +H ++K GF D +++
Sbjct: 112 GSLHIVLEVFKELHGKGVVFDSEVYSVALKTCTRVMDIWLGMEIHGCLIKRGFDLDVYLR 171
Query: 69 TGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLG 128
L++ Y +C + +V EMP + WN I + ++ + + + ++M
Sbjct: 172 CALMNFYGRCWGLEKANQVFHEMPN--PEALLWNEAIILNLQSEKLQKGVELFRKMQFSF 229
Query: 129 LELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEA 184
L+ +T V V+ C + +H V++ G L++++ L N ++SMY+K GK+ A
Sbjct: 230 LKAETATIVRVLQACGKMGALNAAKQIHGYVFRFG-LDSDVSLCNPLISMYSKNGKLELA 288
Query: 185 RSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILG---- 240
R +FD + + SW ++I Y +G +N+A+ L ++ + PD+V + L+ G
Sbjct: 289 RRVFDSMENRNTSSWNSMISSYAALGFLNDAWSLFYELESSDMKPDIVTWNCLLSGHFLH 348
Query: 241 -------------------------------CAQVGNLFLALSMHSLLLKSGYNNEDPLD 269
+++G L + H +L++G++ + +
Sbjct: 349 GYKEEVLNILQRMQGEGFKPNSSSMTSVLQAISELGFLNMGKETHGYVLRNGFDCDVYVG 408
Query: 270 NLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVR 329
L+ MY K L A+ VFD + +++F W S++ GY+ G +A+ L ++ K ++
Sbjct: 409 TSLIDMYVKNHSLTSAQAVFDNMKNRNIFAWNSLVSGYSFKGMFEDALRLLNQMEKEGIK 468
Query: 330 PNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEV 389
P+ T +S A G GKE +++H G
Sbjct: 469 PDLVTWNGMISGYAMWGC---GKE----------------ALAVLHQTKSLGLT------ 503
Query: 390 FERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGM 449
++ W+A+I+G + G +L F +MQ EG+ P++ T +L AC+ +
Sbjct: 504 ------PNVVSWTALISGSSQAGNNRDSLKFFAQMQQ-EGVMPNSASITCLLRACASLSL 556
Query: 450 VDDG 453
+ G
Sbjct: 557 LQKG 560
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 111/414 (26%), Positives = 195/414 (47%), Gaps = 48/414 (11%)
Query: 8 NGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFV 67
+G EE L+ M G NS + VL+A + + + GK H +VL+ GF D +V
Sbjct: 348 HGYKEEVLNILQRMQGEGFKPNSSSMTSVLQAISELGFLNMGKETHGYVLRNGFDCDVYV 407
Query: 68 QTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVL 127
T LIDMY K S++ V D M + R++ +WNS++S +S + ++A+ +L +M
Sbjct: 408 GTSLIDMYVKNHSLTSAQAVFDNM--KNRNIFAWNSLVSGYSFKGMFEDALRLLNQMEKE 465
Query: 128 GLELSASTFVSVVSGCSFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSI 187
G++ T+ ++SG YA +G EA ++
Sbjct: 466 GIKPDLVTWNGMISG--------------------------------YAMWGCGKEALAV 493
Query: 188 FDE---IGET-SIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQ 243
+ +G T ++VSWT +I G GN ++ QM++ V P+ L+ CA
Sbjct: 494 LHQTKSLGLTPNVVSWTALISGSSQAGNNRDSLKFFAQMQQEGVMPNSASITCLLRACAS 553
Query: 244 VGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSM 303
+ L +H L +++G+ + + L+ MY+K L+ A +VF + K++ W M
Sbjct: 554 LSLLQKGKEIHCLSIRNGFIEDVFVATALIDMYSKSSSLKNAHKVFRRIQNKTLASWNCM 613
Query: 304 IGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKE-----IEEYI 358
I G+A G EA+++F + K V P+ T LSAC G + +G + I +Y
Sbjct: 614 IMGFAIFGLGKEAISVFNEMQKVGVGPDAITFTALLSACKNSGLIGEGWKYFDSMITDYR 673
Query: 359 VLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDK-DLAVWSAMINGYAIH 411
++ LE ++ + + G +++A ++ +P K D +W A++ IH
Sbjct: 674 IVPRLEH----YCCMVDLLGRAGYLDEAWDLIHTMPLKPDATIWGALLGSCRIH 723
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 86/343 (25%), Positives = 171/343 (49%), Gaps = 3/343 (0%)
Query: 151 MHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGY-VNV 209
MH + KL N A +++S Y FG A +F + + W + + + +
Sbjct: 52 MHAQMIKLPQKWNPDAAAKNLISSYLGFGDFWSAAMVFYVGLPRNYLKWNSFVEEFKSSA 111
Query: 210 GNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLD 269
G+++ + ++ V D V+ + C +V +++L + +H L+K G++ + L
Sbjct: 112 GSLHIVLEVFKELHGKGVVFDSEVYSVALKTCTRVMDIWLGMEIHGCLIKRGFDLDVYLR 171
Query: 270 NLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVR 329
L++ Y +C LE A +VF + LW I Q + V LF+++ + ++
Sbjct: 172 CALMNFYGRCWGLEKANQVFHEMPNPEALLWNEAIILNLQSEKLQKGVELFRKMQFSFLK 231
Query: 330 PNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEV 389
AT+ L AC ++G+L+ K+I Y+ GL+S+ + LI M+SK G++ A+ V
Sbjct: 232 AETATIVRVLQACGKMGALNAAKQIHGYVFRFGLDSDVSLCNPLISMYSKNGKLELARRV 291
Query: 390 FERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGM 449
F+ + +++ + W++MI+ YA G + A +LFY+++ + +KPD V + +LS G
Sbjct: 292 FDSMENRNTSSWNSMISSYAALGFLNDAWSLFYELESSD-MKPDIVTWNCLLSGHFLHGY 350
Query: 450 VDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKT 492
++ L+ + MQ G +P+ ++ + G ++ +T
Sbjct: 351 KEEVLNILQRMQGE-GFKPNSSSMTSVLQAISELGFLNMGKET 392
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 81/307 (26%), Positives = 140/307 (45%), Gaps = 36/307 (11%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+I S+ G+ ++L ++ M Q GV NS + +L+ACA+++ + GK +H ++ G
Sbjct: 512 LISGSSQAGNNRDSLKFFAQMQQEGVMPNSASITCLLRACASLSLLQKGKEIHCLSIRNG 571
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F +D FV T LIDMYSK S ++ KV ++ +++ SWN +I + L EAI V
Sbjct: 572 FIEDVFVATALIDMYSKSSSLKNAHKVFRR--IQNKTLASWNCMIMGFAIFGLGKEAISV 629
Query: 121 LKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGK 180
EM +G+ A TF +++S C GL+ +S+++ Y +
Sbjct: 630 FNEMQKVGVGPDAITFTALLSACK------------NSGLIGEGWKYFDSMITDYRIVPR 677
Query: 181 VNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILG 240
+ + D +G G ++EA+ L + M + PD ++ L+
Sbjct: 678 LEHYCCMVDLLGRA---------------GYLDEAWDL---IHTMPLKPDATIWGALLGS 719
Query: 241 CAQVGNLFLALSMHSLLLKSGYNNEDP--LDNLLVSMYTKCGDLELARRVFDA--VLEKS 296
C NL A + L K NN L L S++ + D++ R + A V +
Sbjct: 720 CRIHKNLKFAETAAKNLFKLEPNNSANYILMMNLYSIFNRWEDMDHLRELMGAAGVRNRQ 779
Query: 297 VFLWTSM 303
V+ W +
Sbjct: 780 VWSWIQI 786
>gi|356567494|ref|XP_003551954.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49710-like [Glycine max]
Length = 722
Score = 323 bits (829), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 186/562 (33%), Positives = 308/562 (54%), Gaps = 12/562 (2%)
Query: 64 DAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKE 123
+ F LI+ Y+K S +R+V DE+P +VS+N++I+A++ A+ + E
Sbjct: 74 NVFSYNTLINAYAKHSLIHLARQVFDEIP--QPDIVSYNTLIAAYADRGECRPALRLFAE 131
Query: 124 MWVLGLELSASTFVSVVSGCSFRQGI--SMHCCVYKLGLLNNEIPLANSVMSMYAKFGKV 181
+ L L T V+ C G+ +HC V G + + N+V++ Y++ G +
Sbjct: 132 VRELRFGLDGFTLSGVIIACGDDVGLVRQLHCFVVVCGY-DCYASVNNAVLACYSRKGFL 190
Query: 182 NEARSIFDEIGE---TSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLI 238
NEAR +F E+GE VSW +I EA L +M R + D+ +++
Sbjct: 191 NEARRVFREMGEGGGRDEVSWNAMIVACGQHREGLEAVELFREMVRRGLKVDMFTMASVL 250
Query: 239 LGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKC-GDLELARRVFDAVLEKSV 297
V +L + H +++KSG++ + + L+ +Y+KC G + R+VF+ + +
Sbjct: 251 TAFTCVKDLVGGMQFHGMMIKSGFHGNSHVGSGLIDLYSKCAGGMVECRKVFEEIAAPDL 310
Query: 298 FLWTSMIGGYAQLGYPSE-AVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEE 356
LW +MI G++Q SE + F+ + P++ + SAC+ L S S GK++
Sbjct: 311 VLWNTMISGFSQYEDLSEDGIWCFREMQHNGFHPDDCSFVCVTSACSNLSSPSVGKQVHA 370
Query: 357 YIVLNGLESNR-QVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGD 415
+ + + NR V +L+ M+SKCG ++ A+ VF+ +P+ ++ ++MI GYA HG+
Sbjct: 371 LAIKSDIPYNRVSVNNALVAMYSKCGNVHDARRVFDTMPEHNMVSLNSMIAGYAQHGVEV 430
Query: 416 QALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLC 475
++L LF M + + P+ + + ++LSAC H+G V++G +F M+ F IEP EHY C
Sbjct: 431 ESLRLFELMLQ-KDIAPNTITFIAVLSACVHTGKVEEGQKYFNMMKERFRIEPEAEHYSC 489
Query: 476 LVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGS 535
++DLLGRAG+ A + I MP + WA LL AC KH NVEL AA L L P +
Sbjct: 490 MIDLLGRAGKLKEAERIIETMPFNPGSIEWATLLGACRKHGNVELAVKAANEFLQLEPYN 549
Query: 536 TGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLS 595
Y++++N++ SA W+EAAT + LM +R + K+PG S +EID V VFVA D SH +
Sbjct: 550 AAPYVMLSNMYASAARWEEAATVKRLMRERGVKKKPGCSWIEIDKKVHVFVAEDTSHPMI 609
Query: 596 VDIRKTLKELHIKLLEAGYIAE 617
+I + E+ K+ +AGY+ +
Sbjct: 610 KEIHVYMGEILRKMKQAGYVPD 631
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 88/337 (26%), Positives = 161/337 (47%), Gaps = 14/337 (4%)
Query: 13 ETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLI 72
E + + M++ G+ + FT VL A + + G + H ++K GF ++ V +GLI
Sbjct: 226 EAVELFREMVRRGLKVDMFTMASVLTAFTCVKDLVGGMQFHGMMIKSGFHGNSHVGSGLI 285
Query: 73 DMYSKCS-DFVSSRKVLDEMPVRLRSVVSWNSIISAHSR-ACLNDEAILVLKEMWVLGLE 130
D+YSKC+ V RKV +E+ +V WN++IS S+ L+++ I +EM G
Sbjct: 286 DLYSKCAGGMVECRKVFEEIAA--PDLVLWNTMISGFSQYEDLSEDGIWCFREMQHNGFH 343
Query: 131 LSASTFVSVVSGCSFRQ----GISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARS 186
+FV V S CS G +H K + N + + N++++MY+K G V++AR
Sbjct: 344 PDDCSFVCVTSACSNLSSPSVGKQVHALAIKSDIPYNRVSVNNALVAMYSKCGNVHDARR 403
Query: 187 IFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGN 246
+FD + E ++VS ++I GY G E+ L M + + P+ + F+ ++ C G
Sbjct: 404 VFDTMPEHNMVSLNSMIAGYAQHGVEVESLRLFELMLQKDIAPNTITFIAVLSACVHTGK 463
Query: 247 LFLALSMHSLLLKSGYNNEDPLDNL--LVSMYTKCGDLELARRVFDAV-LEKSVFLWTSM 303
+ + ++K + E ++ ++ + + G L+ A R+ + + W ++
Sbjct: 464 VEEGQKYFN-MMKERFRIEPEAEHYSCMIDLLGRAGKLKEAERIIETMPFNPGSIEWATL 522
Query: 304 IGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLS 340
+G + G AV L+ + P A LS
Sbjct: 523 LGACRKHGNVELAVKAANEFLQ--LEPYNAAPYVMLS 557
Score = 112 bits (279), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 85/355 (23%), Positives = 162/355 (45%), Gaps = 44/355 (12%)
Query: 131 LSASTFVSVVSGCSFRQ----GISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARS 186
L TF +++ C ++ G ++H +K L+ L+N +Y+K G ++ A++
Sbjct: 7 LQLQTFRNLLKACIAQRDLITGKTLHALYFK-SLIPPSTYLSNHFTLLYSKCGSLHNAQT 65
Query: 187 IFDEIGETSIVSWTT-------------------------------IIGGYVNVGNVNEA 215
FD ++ S+ T +I Y + G A
Sbjct: 66 SFDLTQYPNVFSYNTLINAYAKHSLIHLARQVFDEIPQPDIVSYNTLIAAYADRGECRPA 125
Query: 216 FGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSM 275
L ++R + D +I+ C ++ L +H ++ GY+ ++N +++
Sbjct: 126 LRLFAEVRELRFGLDGFTLSGVIIACGD--DVGLVRQLHCFVVVCGYDCYASVNNAVLAC 183
Query: 276 YTKCGDLELARRVFDAVLE---KSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNE 332
Y++ G L ARRVF + E + W +MI Q EAV LF+ +++ ++ +
Sbjct: 184 YSRKGFLNEARRVFREMGEGGGRDEVSWNAMIVACGQHREGLEAVELFREMVRRGLKVDM 243
Query: 333 ATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKC-GRINKAKEVFE 391
T+A+ L+A + L G + ++ +G N V + LI ++SKC G + + ++VFE
Sbjct: 244 FTMASVLTAFTCVKDLVGGMQFHGMMIKSGFHGNSHVGSGLIDLYSKCAGGMVECRKVFE 303
Query: 392 RVPDKDLAVWSAMINGYAIH-GMGDQALNLFYKMQHVEGLKPDAVVYTSILSACS 445
+ DL +W+ MI+G++ + + + + F +MQH G PD + + SACS
Sbjct: 304 EIAAPDLVLWNTMISGFSQYEDLSEDGIWCFREMQH-NGFHPDDCSFVCVTSACS 357
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 65/264 (24%), Positives = 113/264 (42%), Gaps = 37/264 (14%)
Query: 231 LVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDL-------- 282
L F NL+ C +L ++H+L KS L N +Y+KCG L
Sbjct: 9 LQTFRNLLKACIAQRDLITGKTLHALYFKSLIPPSTYLSNHFTLLYSKCGSLHNAQTSFD 68
Query: 283 -----------------------ELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNL 319
LAR+VFD + + + + ++I YA G A+ L
Sbjct: 69 LTQYPNVFSYNTLINAYAKHSLIHLARQVFDEIPQPDIVSYNTLIAAYADRGECRPALRL 128
Query: 320 FKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSK 379
F + + + TL+ + AC + L +++ ++V+ G + V +++ +S+
Sbjct: 129 FAEVRELRFGLDGFTLSGVIIACGDDVGLV--RQLHCFVVVCGYDCYASVNNAVLACYSR 186
Query: 380 CGRINKAKEVFERVPD---KDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVV 436
G +N+A+ VF + + +D W+AMI H G +A+ LF +M GLK D
Sbjct: 187 KGFLNEARRVFREMGEGGGRDEVSWNAMIVACGQHREGLEAVELFREMVR-RGLKVDMFT 245
Query: 437 YTSILSACSHSGMVDDGLSFFKSM 460
S+L+A + + G+ F M
Sbjct: 246 MASVLTAFTCVKDLVGGMQFHGMM 269
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 105/220 (47%), Gaps = 8/220 (3%)
Query: 12 EETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAF-VQTG 70
E+ + + M G H + +F V AC+N++S GK+VH+ +K + V
Sbjct: 328 EDGIWCFREMQHNGFHPDDCSFVCVTSACSNLSSPSVGKQVHALAIKSDIPYNRVSVNNA 387
Query: 71 LIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLE 130
L+ MYSKC + +R+V D MP ++VS NS+I+ +++ + E++ + + M +
Sbjct: 388 LVAMYSKCGNVHDARRVFDTMPE--HNMVSLNSMIAGYAQHGVEVESLRLFELMLQKDIA 445
Query: 131 LSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARS 186
+ TF++V+S C +G + + + E + ++ + + GK+ EA
Sbjct: 446 PNTITFIAVLSACVHTGKVEEGQKYFNMMKERFRIEPEAEHYSCMIDLLGRAGKLKEAER 505
Query: 187 IFDEIG-ETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRM 225
I + + + W T++G GNV A N+ ++
Sbjct: 506 IIETMPFNPGSIEWATLLGACRKHGNVELAVKAANEFLQL 545
Score = 45.1 bits (105), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 30/135 (22%), Positives = 60/135 (44%), Gaps = 6/135 (4%)
Query: 334 TLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERV 393
T L AC L GK + + + + + ++SKCG ++ A+ F+
Sbjct: 11 TFRNLLKACIAQRDLITGKTLHALYFKSLIPPSTYLSNHFTLLYSKCGSLHNAQTSFDLT 70
Query: 394 PDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDG 453
++ ++ +IN YA H + A +F ++ +PD V Y ++++A + G
Sbjct: 71 QYPNVFSYNTLINAYAKHSLIHLARQVFDEIP-----QPDIVSYNTLIAAYADRGECRPA 125
Query: 454 LSFFKSMQS-NFGIE 467
L F ++ FG++
Sbjct: 126 LRLFAEVRELRFGLD 140
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/109 (23%), Positives = 55/109 (50%), Gaps = 4/109 (3%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI +G E+L + MLQ + N+ TF VL AC + + +G++ + +++K
Sbjct: 419 MIAGYAQHGVEVESLRLFELMLQKDIAPNTITFIAVLSACVHTGKVEEGQK-YFNMMKER 477
Query: 61 F--QQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISA 107
F + +A + +ID+ + + ++++ MP S + W +++ A
Sbjct: 478 FRIEPEAEHYSCMIDLLGRAGKLKEAERIIETMPFNPGS-IEWATLLGA 525
>gi|356553444|ref|XP_003545066.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Glycine max]
Length = 1033
Score = 323 bits (829), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 199/619 (32%), Positives = 341/619 (55%), Gaps = 18/619 (2%)
Query: 12 EETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKR----VHSHVLKVGFQQDAFV 67
EE + M + V N+ ++ ++L A +++ +GKR VH+++++ D ++
Sbjct: 333 EEAAKIFKEM-KDLVEINASSYAVLLSAFTEFSNLKEGKRKGQEVHAYLIRNALV-DVWI 390
Query: 68 QTG--LIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMW 125
G L+++Y+KC+ ++R + MP + VSWNSIIS +EA+ M
Sbjct: 391 LIGNALVNLYAKCNAIDNARSIFQLMPSK--DTVSWNSIISGLDHNERFEEAVACFHTMR 448
Query: 126 VLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGL---LNNEIPLANSVMSMYAKFGKVN 182
G+ S + +S +S C+ I + ++ G+ L+ ++ ++N+++++YA+ +
Sbjct: 449 RNGMVPSKFSVISTLSSCASLGWIMLGQQIHGEGIKCGLDLDVSVSNALLTLYAETDCME 508
Query: 183 EARSIFDEIGETSIVSWTTIIGGY-VNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGC 241
E + +F + E VSW + IG + +V +A +M + P+ V F+N++
Sbjct: 509 EYQKVFFLMPEYDQVSWNSFIGALATSEASVLQAIKYFLEMMQAGWKPNRVTFINILSAV 568
Query: 242 AQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFL-W 300
+ + L L +H+L+LK +++ ++N L++ Y KC +E +F + E+ + W
Sbjct: 569 SSLSLLELGRQIHALILKHSVADDNAIENTLLAFYGKCEQMEDCEIIFSRMSERRDEVSW 628
Query: 301 TSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVL 360
+MI GY G +A+ L +++ R ++ TLAT LSACA + +L +G E+ +
Sbjct: 629 NAMISGYIHNGILHKAMGLVWLMMQKGQRLDDFTLATVLSACASVATLERGMEVHACAIR 688
Query: 361 NGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNL 420
LE+ V ++L+ M++KCG+I+ A FE +P +++ W++MI+GYA HG G +AL L
Sbjct: 689 ACLEAEVVVGSALVDMYAKCGKIDYASRFFELMPVRNIYSWNSMISGYARHGHGGKALKL 748
Query: 421 FYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLL 480
F +M+ G PD V + +LSACSH G+VD+G FKSM + + P IEH+ C+VDLL
Sbjct: 749 FTQMKQ-HGQLPDHVTFVGVLSACSHVGLVDEGFEHFKSMGEVYELAPRIEHFSCMVDLL 807
Query: 481 GRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMK--HHNVELGEYAAKNLLTLNPGSTGN 538
GRAG + I MP+ A +W +L AC + N ELG AAK L+ L P + N
Sbjct: 808 GRAGDVKKLEEFIKTMPMNPNALIWRTILGACCRANSRNTELGRRAAKMLIELEPLNAVN 867
Query: 539 YILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDI 598
Y+L++N+ + G W++ AR M + + KE G S V + V VFVAGD++H I
Sbjct: 868 YVLLSNMHAAGGKWEDVEEARLAMRNAEVKKEAGCSWVTMKDGVHVFVAGDQTHPEKEKI 927
Query: 599 RKTLKELHIKLLEAGYIAE 617
LKE+ K+ + GY+ E
Sbjct: 928 YDKLKEIMNKMRDLGYVPE 946
Score = 156 bits (394), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 109/424 (25%), Positives = 222/424 (52%), Gaps = 23/424 (5%)
Query: 45 SIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSI 104
++ D ++H + K G D F L++++ + + VS++K+ DEMP +++VSW+ +
Sbjct: 54 TVEDAHQLHLQIYKTGLTSDVFWCNTLVNIFVRAGNLVSAQKLFDEMPQ--KNLVSWSCL 111
Query: 105 ISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCS------FRQGISMHCCVYKL 158
+S +++ + DEA ++ + + GL + S + C + G+ +H + K
Sbjct: 112 VSGYAQNGMPDEACMLFRGIISAGLLPNHYAIGSALRACQELGPNMLKLGMEIHGLISK- 170
Query: 159 GLLNNEIPLANSVMSMYAKF-GKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFG 217
+++ L+N +MSMY+ +++AR +F+EI + SW +II Y G+ AF
Sbjct: 171 SPYASDMVLSNVLMSMYSHCSASIDDARRVFEEIKMKTSASWNSIISVYCRRGDAISAFK 230
Query: 218 LCNQMRR----MSVTPDLVVFLNLI-LGCAQVG-NLFLALSMHSLLLKSGYNNEDPLDNL 271
L + M+R ++ P+ F +L+ + C+ V L L M + + KS + + + +
Sbjct: 231 LFSSMQREATELNCRPNEYTFCSLVTVACSLVDCGLTLLEQMLARIEKSSFVKDLYVGSA 290
Query: 272 LVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPN 331
LVS + + G ++ A+ +F+ + +++ ++ G A+ EA +FK +K V N
Sbjct: 291 LVSGFARYGLIDSAKMIFEQMDDRNAVTMNGLMVGLARQHQGEEAAKIFKE-MKDLVEIN 349
Query: 332 EATLATTLSACAELGSLS----KGKEIEEYIVLNGL-ESNRQVQTSLIHMFSKCGRINKA 386
++ A LSA E +L KG+E+ Y++ N L + + +L+++++KC I+ A
Sbjct: 350 ASSYAVLLSAFTEFSNLKEGKRKGQEVHAYLIRNALVDVWILIGNALVNLYAKCNAIDNA 409
Query: 387 KEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSH 446
+ +F+ +P KD W+++I+G + ++A+ F+ M+ G+ P S LS+C+
Sbjct: 410 RSIFQLMPSKDTVSWNSIISGLDHNERFEEAVACFHTMRR-NGMVPSKFSVISTLSSCAS 468
Query: 447 SGMV 450
G +
Sbjct: 469 LGWI 472
Score = 145 bits (365), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 101/407 (24%), Positives = 199/407 (48%), Gaps = 11/407 (2%)
Query: 7 NNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAF 66
+N FEE ++ + +M + G+ + F+ L +CA++ I G+++H +K G D
Sbjct: 433 HNERFEEAVACFHTMRRNGMVPSKFSVISTLSSCASLGWIMLGQQIHGEGIKCGLDLDVS 492
Query: 67 VQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLND-EAILVLKEMW 125
V L+ +Y++ +KV MP VSWNS I A + + + +AI EM
Sbjct: 493 VSNALLTLYAETDCMEEYQKVFFLMPE--YDQVSWNSFIGALATSEASVLQAIKYFLEMM 550
Query: 126 VLGLELSASTFVSV----VSGCSFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKV 181
G + + TF+++ S G +H + K + ++ + N++++ Y K ++
Sbjct: 551 QAGWKPNRVTFINILSAVSSLSLLELGRQIHALILKHSVADDN-AIENTLLAFYGKCEQM 609
Query: 182 NEARSIFDEIGE-TSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILG 240
+ IF + E VSW +I GY++ G +++A GL M + D ++
Sbjct: 610 EDCEIIFSRMSERRDEVSWNAMISGYIHNGILHKAMGLVWLMMQKGQRLDDFTLATVLSA 669
Query: 241 CAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLW 300
CA V L + +H+ +++ E + + LV MY KCG ++ A R F+ + ++++ W
Sbjct: 670 CASVATLERGMEVHACAIRACLEAEVVVGSALVDMYAKCGKIDYASRFFELMPVRNIYSW 729
Query: 301 TSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKE-IEEYIV 359
SMI GYA+ G+ +A+ LF ++ + P+ T LSAC+ +G + +G E +
Sbjct: 730 NSMISGYARHGHGGKALKLFTQMKQHGQLPDHVTFVGVLSACSHVGLVDEGFEHFKSMGE 789
Query: 360 LNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVP-DKDLAVWSAMI 405
+ L + + ++ + + G + K +E + +P + + +W ++
Sbjct: 790 VYELAPRIEHFSCMVDLLGRAGDVKKLEEFIKTMPMNPNALIWRTIL 836
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 109/459 (23%), Positives = 219/459 (47%), Gaps = 24/459 (5%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANI--NSIWDGKRVHSHVLK 58
++ NG +E + ++ G+ N + L+AC + N + G +H + K
Sbjct: 111 LVSGYAQNGMPDEACMLFRGIISAGLLPNHYAIGSALRACQELGPNMLKLGMEIHGLISK 170
Query: 59 VGFQQDAFVQTGLIDMYSKCSDFV-SSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEA 117
+ D + L+ MYS CS + +R+V +E +++++ SWNSIIS + R A
Sbjct: 171 SPYASDMVLSNVLMSMYSHCSASIDDARRVFEE--IKMKTSASWNSIISVYCRRGDAISA 228
Query: 118 ILVLKEMWVLGLELSAS----TFVSVVS-GCSFRQ-GIS----MHCCVYKLGLLNNEIPL 167
+ M EL+ TF S+V+ CS G++ M + K + ++ +
Sbjct: 229 FKLFSSMQREATELNCRPNEYTFCSLVTVACSLVDCGLTLLEQMLARIEKSSFV-KDLYV 287
Query: 168 ANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSV 227
++++S +A++G ++ A+ IF+++ + + V+ ++ G EA + +M+ + V
Sbjct: 288 GSALVSGFARYGLIDSAKMIFEQMDDRNAVTMNGLMVGLARQHQGEEAAKIFKEMKDL-V 346
Query: 228 TPDLVVFLNLILGCAQVGNL----FLALSMHSLLLKSGYNNEDPL-DNLLVSMYTKCGDL 282
+ + L+ + NL +H+ L+++ + L N LV++Y KC +
Sbjct: 347 EINASSYAVLLSAFTEFSNLKEGKRKGQEVHAYLIRNALVDVWILIGNALVNLYAKCNAI 406
Query: 283 ELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSAC 342
+ AR +F + K W S+I G EAV F + + + P++ ++ +TLS+C
Sbjct: 407 DNARSIFQLMPSKDTVSWNSIISGLDHNERFEEAVACFHTMRRNGMVPSKFSVISTLSSC 466
Query: 343 AELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWS 402
A LG + G++I + GL+ + V +L+ ++++ + + ++VF +P+ D W+
Sbjct: 467 ASLGWIMLGQQIHGEGIKCGLDLDVSVSNALLTLYAETDCMEEYQKVFFLMPEYDQVSWN 526
Query: 403 AMINGYAIHGMGD-QALNLFYKMQHVEGLKPDAVVYTSI 440
+ I A QA+ F +M G KP+ V + +I
Sbjct: 527 SFIGALATSEASVLQAIKYFLEMMQA-GWKPNRVTFINI 564
Score = 122 bits (306), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 83/320 (25%), Positives = 166/320 (51%), Gaps = 12/320 (3%)
Query: 143 CSFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTI 202
C+ +H +YK GL +++ N++++++ + G + A+ +FDE+ + ++VSW+ +
Sbjct: 53 CTVEDAHQLHLQIYKTGL-TSDVFWCNTLVNIFVRAGNLVSAQKLFDEMPQKNLVSWSCL 111
Query: 203 IGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSM--HSLLLKS 260
+ GY G +EA L + + P+ + + C ++G L L M H L+ KS
Sbjct: 112 VSGYAQNGMPDEACMLFRGIISAGLLPNHYAIGSALRACQELGPNMLKLGMEIHGLISKS 171
Query: 261 GYNNEDPLDNLLVSMYTKC-GDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNL 319
Y ++ L N+L+SMY+ C ++ ARRVF+ + K+ W S+I Y + G A L
Sbjct: 172 PYASDMVLSNVLMSMYSHCSASIDDARRVFEEIKMKTSASWNSIISVYCRRGDAISAFKL 231
Query: 320 FKRLLKTSV----RPNEATLATTLSACAEL--GSLSKGKEIEEYIVLNGLESNRQVQTSL 373
F + + + RPNE T + ++ L L+ +++ I + + V ++L
Sbjct: 232 FSSMQREATELNCRPNEYTFCSLVTVACSLVDCGLTLLEQMLARIEKSSFVKDLYVGSAL 291
Query: 374 IHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPD 433
+ F++ G I+ AK +FE++ D++ + ++ G A G++A +F +M+ + ++ +
Sbjct: 292 VSGFARYGLIDSAKMIFEQMDDRNAVTMNGLMVGLARQHQGEEAAKIFKEMKDL--VEIN 349
Query: 434 AVVYTSILSACSHSGMVDDG 453
A Y +LSA + + +G
Sbjct: 350 ASSYAVLLSAFTEFSNLKEG 369
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 93/321 (28%), Positives = 152/321 (47%), Gaps = 26/321 (8%)
Query: 250 ALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQ 309
A +H + K+G ++ N LV+++ + G+L A+++FD + +K++ W+ ++ GYAQ
Sbjct: 58 AHQLHLQIYKTGLTSDVFWCNTLVNIFVRAGNLVSAQKLFDEMPQKNLVSWSCLVSGYAQ 117
Query: 310 LGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGS--LSKGKEIEEYIVLNGLESNR 367
G P EA LF+ ++ + PN + + L AC ELG L G EI I + S+
Sbjct: 118 NGMPDEACMLFRGIISAGLLPNHYAIGSALRACQELGPNMLKLGMEIHGLISKSPYASDM 177
Query: 368 QVQTSLIHMFSKC-GRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQH 426
+ L+ M+S C I+ A+ VFE + K A W+++I+ Y G A LF MQ
Sbjct: 178 VLSNVLMSMYSHCSASIDDARRVFEEIKMKTSASWNSIISVYCRRGDAISAFKLFSSMQR 237
Query: 427 VE---GLKPDAVVYTSILS-ACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYL---CLVDL 479
+P+ + S+++ ACS +VD GL+ + M + ++ LV
Sbjct: 238 EATELNCRPNEYTFCSLVTVACS---LVDCGLTLLEQMLARIEKSSFVKDLYVGSALVSG 294
Query: 480 LGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAA------KNLLTLNP 533
R G D A K I E + A L+ + H GE AA K+L+ +N
Sbjct: 295 FARYGLIDSA-KMIFEQMDDRNAVTMNGLMVGLARQHQ---GEEAAKIFKEMKDLVEINA 350
Query: 534 GSTGNYILMANLFTSAGMWKE 554
S Y ++ + FT KE
Sbjct: 351 SS---YAVLLSAFTEFSNLKE 368
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 75/144 (52%), Gaps = 2/144 (1%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI +NG + + M+Q G + FT VL ACA++ ++ G VH+ ++
Sbjct: 631 MISGYIHNGILHKAMGLVWLMMQKGQRLDDFTLATVLSACASVATLERGMEVHACAIRAC 690
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+ + V + L+DMY+KC + + + MPV R++ SWNS+IS ++R +A+ +
Sbjct: 691 LEAEVVVGSALVDMYAKCGKIDYASRFFELMPV--RNIYSWNSMISGYARHGHGGKALKL 748
Query: 121 LKEMWVLGLELSASTFVSVVSGCS 144
+M G TFV V+S CS
Sbjct: 749 FTQMKQHGQLPDHVTFVGVLSACS 772
>gi|115439575|ref|NP_001044067.1| Os01g0715900 [Oryza sativa Japonica Group]
gi|20160882|dbj|BAB89820.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113533598|dbj|BAF05981.1| Os01g0715900 [Oryza sativa Japonica Group]
gi|125571815|gb|EAZ13330.1| hypothetical protein OsJ_03251 [Oryza sativa Japonica Group]
Length = 608
Score = 323 bits (829), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 183/562 (32%), Positives = 297/562 (52%), Gaps = 38/562 (6%)
Query: 71 LIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLE 130
L D+ S S ++R + D +P ++ ++ISA SR C + E + + G +
Sbjct: 25 LHDLLSDASTSRAARHLFDAVPRPTPALC--GTLISALSRLCSHQELLDAFSSLHRRGSD 82
Query: 131 LSASTFVSVVSGCSF----RQGISMHCCVYKLGLLN------------------------ 162
+ VV C+ RQG +HC GLL
Sbjct: 83 VPPGCVPLVVKSCAILAASRQGKQVHCHAIVRGLLGDIFVQTALVDFYAKNGDMDCAVKV 142
Query: 163 -NEIPLA-----NSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAF 216
+E+P+ N +++ Y+K G V +AR +FD + + SW ++I Y + G EA
Sbjct: 143 FDEMPVKDPIPMNCLITGYSKSGDVVKARRLFDGMVRRTSASWNSMIACYAHGGEYQEAL 202
Query: 217 GLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMY 276
L +M P+ + + CA+ G+L SL+ + N + L+ MY
Sbjct: 203 RLFRRMLSEGARPNAITIATMFSICAKTGDLETGKWARSLIAEQDLQNM-IVHTALMEMY 261
Query: 277 TKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLA 336
KC ++ ARR FD + ++ V W++MI GYAQ G P E++ LF+R+ TS +PNE TL
Sbjct: 262 VKCRAIDEARREFDRMQQRDVVAWSTMIAGYAQNGRPHESLELFERMKATSCKPNEVTLV 321
Query: 337 TTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDK 396
LSACA+LGS G +I ++ L + ++LI M++KCG + +A+ VF R+ K
Sbjct: 322 GVLSACAQLGSDELGGQIGSHVESQNLPLTSYLGSALIDMYTKCGHVGRARSVFNRMEHK 381
Query: 397 DLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSF 456
+ W++M+ G A++G A+ L+ +M E ++P+ + + ++L+AC+H+G+VD G+SF
Sbjct: 382 VVITWNSMMRGLALNGFAQDAITLYKEMTE-EDVQPNEITFVALLTACTHAGLVDQGMSF 440
Query: 457 FKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHH 516
FK M++ + P +EH C+VDLL ++GR A K I +M VE A +W+ LLSAC H
Sbjct: 441 FKEMKTIHHVSPQVEHCACIVDLLCKSGRLREAYKFICDMEVEPNAVIWSTLLSACRAHA 500
Query: 517 NVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQV 576
+VEL + AA LL L P ++ Y+L++N++ AG+W + R LM + + K +S +
Sbjct: 501 DVELAKLAASKLLVLEPDNSSIYVLLSNIYADAGLWGDVREIRDLMRSKNVQKLSAYSWI 560
Query: 577 EIDGSVQVFVAGDRSHHLSVDI 598
E+DG V F+ D H S +I
Sbjct: 561 ELDGEVHKFLVQDTYHPKSAEI 582
Score = 188 bits (478), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 122/438 (27%), Positives = 208/438 (47%), Gaps = 37/438 (8%)
Query: 10 SFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQT 69
S +E L +SS+ + G PLV+K+CA + + GK+VH H + G D FVQT
Sbjct: 65 SHQELLDAFSSLHRRGSDVPPGCVPLVVKSCAILAASRQGKQVHCHAIVRGLLGDIFVQT 124
Query: 70 GLIDMYSKCSDFVSSRKVLDEMPVR-----------------------------LRSVVS 100
L+D Y+K D + KV DEMPV+ R+ S
Sbjct: 125 ALVDFYAKNGDMDCAVKVFDEMPVKDPIPMNCLITGYSKSGDVVKARRLFDGMVRRTSAS 184
Query: 101 WNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVY 156
WNS+I+ ++ EA+ + + M G +A T ++ S C+ G +
Sbjct: 185 WNSMIACYAHGGEYQEALRLFRRMLSEGARPNAITIATMFSICAKTGDLETGKWARSLIA 244
Query: 157 KLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAF 216
+ L N + + ++M MY K ++EAR FD + + +V+W+T+I GY G +E+
Sbjct: 245 EQDLQN--MIVHTALMEMYVKCRAIDEARREFDRMQQRDVVAWSTMIAGYAQNGRPHESL 302
Query: 217 GLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMY 276
L +M+ S P+ V + ++ CAQ+G+ L + S + L + L+ MY
Sbjct: 303 ELFERMKATSCKPNEVTLVGVLSACAQLGSDELGGQIGSHVESQNLPLTSYLGSALIDMY 362
Query: 277 TKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLA 336
TKCG + AR VF+ + K V W SM+ G A G+ +A+ L+K + + V+PNE T
Sbjct: 363 TKCGHVGRARSVFNRMEHKVVITWNSMMRGLALNGFAQDAITLYKEMTEEDVQPNEITFV 422
Query: 337 TTLSACAELGSLSKGKE-IEEYIVLNGLESNRQVQTSLIHMFSKCGRINKA-KEVFERVP 394
L+AC G + +G +E ++ + + ++ + K GR+ +A K + +
Sbjct: 423 ALLTACTHAGLVDQGMSFFKEMKTIHHVSPQVEHCACIVDLLCKSGRLREAYKFICDMEV 482
Query: 395 DKDLAVWSAMINGYAIHG 412
+ + +WS +++ H
Sbjct: 483 EPNAVIWSTLLSACRAHA 500
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 102/210 (48%), Gaps = 7/210 (3%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI NG E+L + M T N T VL ACA + S G ++ SHV
Sbjct: 288 MIAGYAQNGRPHESLELFERMKATSCKPNEVTLVGVLSACAQLGSDELGGQIGSHVESQN 347
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+++ + LIDMY+KC +R V + M ++ V++WNS++ + +AI +
Sbjct: 348 LPLTSYLGSALIDMYTKCGHVGRARSVFNRMEHKV--VITWNSMMRGLALNGFAQDAITL 405
Query: 121 LKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
KEM ++ + TFV++++ C+ QG+S + + ++ ++ ++ +
Sbjct: 406 YKEMTEEDVQPNEITFVALLTACTHAGLVDQGMSFFKEMKTIHHVSPQVEHCACIVDLLC 465
Query: 177 KFGKVNEA-RSIFDEIGETSIVSWTTIIGG 205
K G++ EA + I D E + V W+T++
Sbjct: 466 KSGRLREAYKFICDMEVEPNAVIWSTLLSA 495
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 101/225 (44%), Gaps = 36/225 (16%)
Query: 260 SGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNL 319
+G PL +LL T AR +FDAV + L ++I ++L E ++
Sbjct: 17 AGLLKTRPLHDLLSDASTS----RAARHLFDAVPRPTPALCGTLISALSRLCSHQELLDA 72
Query: 320 FKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSK 379
F L + + + +CA L + +GK++ + ++ GL + VQT+L+ ++K
Sbjct: 73 FSSLHRRGSDVPPGCVPLVVKSCAILAASRQGKQVHCHAIVRGLLGDIFVQTALVDFYAK 132
Query: 380 CGRINKAKEVFERVPDKDL-------------------------------AVWSAMINGY 408
G ++ A +VF+ +P KD A W++MI Y
Sbjct: 133 NGDMDCAVKVFDEMPVKDPIPMNCLITGYSKSGDVVKARRLFDGMVRRTSASWNSMIACY 192
Query: 409 AIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDG 453
A G +AL LF +M EG +P+A+ ++ S C+ +G ++ G
Sbjct: 193 AHGGEYQEALRLFRRMLS-EGARPNAITIATMFSICAKTGDLETG 236
>gi|357457477|ref|XP_003599019.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355488067|gb|AES69270.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 944
Score = 323 bits (829), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 188/583 (32%), Positives = 309/583 (53%), Gaps = 13/583 (2%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
M+ NG + E L M + V N L A + + GK ++++ L++G
Sbjct: 270 MMAGYVKNGCYFEGLQLLHKMRRGNVKMNKVAVVNALLVVAEMRDLEKGKEIYNYALQMG 329
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
D V T ++ MY+KC + +R++ + + R +V+W++ +SA E + +
Sbjct: 330 LMSDIVVATPIVCMYAKCGELKKARELF--LSLEGRDLVAWSAFLSALVETGYPREVLSI 387
Query: 121 LKEMWVLGLELSASTFVSVVSGCSFRQGIS----MHCCVYKLGLLNNEIPLANSVMSMYA 176
+ M GL+ + +VSGC+ I MHC K + ++I + +++SMY
Sbjct: 388 FQVMQYEGLKPDKAILSILVSGCTEISNIGLGKIMHCYAIKADM-ESDISMVTTLVSMYI 446
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
+F A ++F+ + IV W T+I G+ G+ + A + N+++ + PD +
Sbjct: 447 RFELFTYAMTLFNRMQIKDIVVWNTLINGFTKYGDPHLALEMFNRLQLSGILPDSGTMVG 506
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
L CA + +L L +H + KSG+ ++ + L+ MY KCG L R+F +L K
Sbjct: 507 LFSACAIMDDLDLGTCLHGGIEKSGFESDIHVKVALMDMYAKCGSLCSVERLF--LLTKH 564
Query: 297 V---FLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKE 353
V W MI GY GY +EA++ F+R+ +VRPN T T L A + L L +
Sbjct: 565 VKDEVSWNVMIAGYLHNGYSNEAISTFRRMKLENVRPNLVTFVTILPAVSYLSILREAMA 624
Query: 354 IEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGM 413
I+ G S + SLI M++KCG++ +++ F + +KD W+AM++ YA+HG
Sbjct: 625 FHTCIIRMGFLSCTLIGNSLIDMYAKCGQLRYSEKCFHEMENKDTISWNAMLSAYAMHGQ 684
Query: 414 GDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHY 473
G+ A+ LF MQ ++ D+V Y S+LSAC HSG++ +G F SM +EPS+EHY
Sbjct: 685 GELAVALFSVMQE-SNVRVDSVSYISVLSACRHSGLIQEGWDIFASMCEKHHVEPSMEHY 743
Query: 474 LCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNP 533
C+VDLLG AG FD L +++M E A+VW LL+AC H NV LGE A +LL L P
Sbjct: 744 ACMVDLLGCAGLFDEVLSLLNKMTTEPDARVWGALLAACKIHSNVTLGEVAVHHLLKLEP 803
Query: 534 GSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQV 576
+ +++++++++ G W +A R +++ L K PG+S V
Sbjct: 804 RNPVHHVVLSDIYAQCGRWNDARRTRSHINNHGLKKIPGYSWV 846
Score = 213 bits (543), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 136/477 (28%), Positives = 257/477 (53%), Gaps = 9/477 (1%)
Query: 11 FEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTG 70
F + ++ Y ++L+ G+ + FTF VLKAC + +G ++ ++ G + D ++ T
Sbjct: 80 FHKAINLYHTILKIGLKPDKFTFNFVLKACTSALDFHEGVNIYKDIVFNGLECDVYIGTS 139
Query: 71 LIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLE 130
LIDM+ K ++R V D+MPV+ V WN++IS S++ EA+ + M + G E
Sbjct: 140 LIDMFCKMGCLDNARNVFDKMPVK--DGVCWNAMISGLSQSLNPCEALEMFWRMQMEGFE 197
Query: 131 LSASTFVSVVSGCSFRQGISMHCCVYKLG-LLNNEIP--LANSVMSMYAKFGKVNEARSI 187
+ + +++ S R G + CC G ++ I ++NS++ MY K G V+ A+ +
Sbjct: 198 VDKVSILNLAPAVS-RLG-DVGCCKSIHGYVVRRSICGVVSNSLIDMYCKCGDVHSAQRV 255
Query: 188 FDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNL 247
FD +G VSW T++ GYV G E L ++MRR +V + V +N +L A++ +L
Sbjct: 256 FDRMGVRDDVSWATMMAGYVKNGCYFEGLQLLHKMRRGNVKMNKVAVVNALLVVAEMRDL 315
Query: 248 FLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGY 307
+++ L+ G ++ + +V MY KCG+L+ AR +F ++ + + W++ +
Sbjct: 316 EKGKEIYNYALQMGLMSDIVVATPIVCMYAKCGELKKARELFLSLEGRDLVAWSAFLSAL 375
Query: 308 AQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNR 367
+ GYP E +++F+ + ++P++A L+ +S C E+ ++ GK + Y + +ES+
Sbjct: 376 VETGYPREVLSIFQVMQYEGLKPDKAILSILVSGCTEISNIGLGKIMHCYAIKADMESDI 435
Query: 368 QVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHV 427
+ T+L+ M+ + A +F R+ KD+ VW+ +ING+ +G AL +F ++Q +
Sbjct: 436 SMVTTLVSMYIRFELFTYAMTLFNRMQIKDIVVWNTLINGFTKYGDPHLALEMFNRLQ-L 494
Query: 428 EGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAG 484
G+ PD+ + SAC+ +D G ++ + G E I + L+D+ + G
Sbjct: 495 SGILPDSGTMVGLFSACAIMDDLDLGTCLHGGIEKS-GFESDIHVKVALMDMYAKCG 550
Score = 168 bits (425), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 120/438 (27%), Positives = 216/438 (49%), Gaps = 16/438 (3%)
Query: 91 MPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCS----FR 146
+ ++ S++ +NS I A+S+ +AI + + +GL+ TF V+ C+ F
Sbjct: 57 LQIKNPSLILYNSFIKAYSKFHHFHKAINLYHTILKIGLKPDKFTFNFVLKACTSALDFH 116
Query: 147 QGISMHCCVYKLGLLNN---EIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTII 203
+G++ +YK + N ++ + S++ M+ K G ++ AR++FD++ V W +I
Sbjct: 117 EGVN----IYKDIVFNGLECDVYIGTSLIDMFCKMGCLDNARNVFDKMPVKDGVCWNAMI 172
Query: 204 GGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYN 263
G N EA + +M+ D V LNL +++G++ S+H +++
Sbjct: 173 SGLSQSLNPCEALEMFWRMQMEGFEVDKVSILNLAPAVSRLGDVGCCKSIHGYVVRRSIC 232
Query: 264 NEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRL 323
+ N L+ MY KCGD+ A+RVFD + + W +M+ GY + G E + L ++
Sbjct: 233 G--VVSNSLIDMYCKCGDVHSAQRVFDRMGVRDDVSWATMMAGYVKNGCYFEGLQLLHKM 290
Query: 324 LKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRI 383
+ +V+ N+ + L AE+ L KGKEI Y + GL S+ V T ++ M++KCG +
Sbjct: 291 RRGNVKMNKVAVVNALLVVAEMRDLEKGKEIYNYALQMGLMSDIVVATPIVCMYAKCGEL 350
Query: 384 NKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSA 443
KA+E+F + +DL WSA ++ G + L++F MQ+ EGLKPD + + ++S
Sbjct: 351 KKARELFLSLEGRDLVAWSAFLSALVETGYPREVLSIFQVMQY-EGLKPDKAILSILVSG 409
Query: 444 CSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQ 503
C+ + G +E I LV + R F A+ + M ++
Sbjct: 410 CTEISNIGLG-KIMHCYAIKADMESDISMVTTLVSMYIRFELFTYAMTLFNRMQIK-DIV 467
Query: 504 VWAPLLSACMKHHNVELG 521
VW L++ K+ + L
Sbjct: 468 VWNTLINGFTKYGDPHLA 485
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 117/238 (49%), Gaps = 2/238 (0%)
Query: 188 FDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNL 247
F +I S++ + + I Y + ++A L + + ++ + PD F ++ C +
Sbjct: 56 FLQIKNPSLILYNSFIKAYSKFHHFHKAINLYHTILKIGLKPDKFTFNFVLKACTSALDF 115
Query: 248 FLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGY 307
++++ ++ +G + + L+ M+ K G L+ AR VFD + K W +MI G
Sbjct: 116 HEGVNIYKDIVFNGLECDVYIGTSLIDMFCKMGCLDNARNVFDKMPVKDGVCWNAMISGL 175
Query: 308 AQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNR 367
+Q P EA+ +F R+ ++ ++ A + LG + K I Y+V +
Sbjct: 176 SQSLNPCEALEMFWRMQMEGFEVDKVSILNLAPAVSRLGDVGCCKSIHGYVVRRSICG-- 233
Query: 368 QVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQ 425
V SLI M+ KCG ++ A+ VF+R+ +D W+ M+ GY +G + L L +KM+
Sbjct: 234 VVSNSLIDMYCKCGDVHSAQRVFDRMGVRDDVSWATMMAGYVKNGCYFEGLQLLHKMR 291
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 56/162 (34%), Positives = 91/162 (56%), Gaps = 1/162 (0%)
Query: 289 FDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSL 348
F + S+ L+ S I Y++ + +A+NL+ +LK ++P++ T L AC
Sbjct: 56 FLQIKNPSLILYNSFIKAYSKFHHFHKAINLYHTILKIGLKPDKFTFNFVLKACTSALDF 115
Query: 349 SKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGY 408
+G I + IV NGLE + + TSLI MF K G ++ A+ VF+++P KD W+AMI+G
Sbjct: 116 HEGVNIYKDIVFNGLECDVYIGTSLIDMFCKMGCLDNARNVFDKMPVKDGVCWNAMISGL 175
Query: 409 AIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMV 450
+ +AL +F++MQ +EG + D V ++ A S G V
Sbjct: 176 SQSLNPCEALEMFWRMQ-MEGFEVDKVSILNLAPAVSRLGDV 216
>gi|238478502|ref|NP_173097.2| PPR repeat domain-containing protein [Arabidopsis thaliana]
gi|332191338|gb|AEE29459.1| PPR repeat domain-containing protein [Arabidopsis thaliana]
Length = 937
Score = 323 bits (829), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 178/617 (28%), Positives = 334/617 (54%), Gaps = 9/617 (1%)
Query: 6 TNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDA 65
NG EE+ +S M + NS T +L +++ G+ +H V+K+GF
Sbjct: 237 AQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVV 296
Query: 66 FVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMW 125
V L+ MY+ V + V +MP + ++SWNS++++ + +A+ +L M
Sbjct: 297 CVCNTLLRMYAGAGRSVEANLVFKQMPTK--DLISWNSLMASFVNDGRSLDALGLLCSMI 354
Query: 126 VLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKV 181
G ++ TF S ++ C F +G +H V GL N+I + N+++SMY K G++
Sbjct: 355 SSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQI-IGNALVSMYGKIGEM 413
Query: 182 NEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGC 241
+E+R + ++ +V+W +IGGY + ++A MR V+ + + ++++ C
Sbjct: 414 SESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSAC 473
Query: 242 AQVGNLF-LALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLW 300
G+L +H+ ++ +G+ +++ + N L++MY KCGDL ++ +F+ + +++ W
Sbjct: 474 LLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITW 533
Query: 301 TSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVL 360
+M+ A G+ E + L ++ V ++ + + LSA A+L L +G+++ V
Sbjct: 534 NAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVK 593
Query: 361 NGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNL 420
G E + + + M+SKCG I + ++ ++ L W+ +I+ HG ++
Sbjct: 594 LGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCAT 653
Query: 421 FYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLL 480
F++M + G+KP V + S+L+ACSH G+VD GL+++ + +FG+EP+IEH +C++DLL
Sbjct: 654 FHEMLEM-GIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLL 712
Query: 481 GRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYI 540
GR+GR A I +MP++ VW LL++C H N++ G AA+NL L P Y+
Sbjct: 713 GRSGRLAEAETFISKMPMKPNDLVWRSLLASCKIHGNLDRGRKAAENLSKLEPEDDSVYV 772
Query: 541 LMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRK 600
L +N+F + G W++ R M + + K+ S V++ V F GDR+H +++I
Sbjct: 773 LSSNMFATTGRWEDVENVRKQMGFKNIKKKQACSWVKLKDKVSSFGIGDRTHPQTMEIYA 832
Query: 601 TLKELHIKLLEAGYIAE 617
L+++ + E+GY+A+
Sbjct: 833 KLEDIKKLIKESGYVAD 849
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 126/444 (28%), Positives = 219/444 (49%), Gaps = 15/444 (3%)
Query: 9 GSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIW-DGKRVHSHVLKVGFQQDAFV 67
G + E + + M G+ +SF ++ AC S++ +G +VH V K G D +V
Sbjct: 37 GLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYV 96
Query: 68 QTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVL 127
T ++ +Y SRKV +EMP R+VVSW S++ +S +E I + K M
Sbjct: 97 STAILHLYGVYGLVSCSRKVFEEMPD--RNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGE 154
Query: 128 GLELSASTFVSVVSGCSF-------RQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGK 180
G+ + ++ V+S C RQ I V K G L +++ + NS++SM G
Sbjct: 155 GVGCNENSMSLVISSCGLLKDESLGRQIIGQ---VVKSG-LESKLAVENSLISMLGSMGN 210
Query: 181 VNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILG 240
V+ A IFD++ E +SW +I Y G++ E+F + + MRR + L+
Sbjct: 211 VDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSV 270
Query: 241 CAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLW 300
V + +H L++K G+++ + N L+ MY G A VF + K + W
Sbjct: 271 LGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISW 330
Query: 301 TSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVL 360
S++ + G +A+ L ++ + N T + L+AC KG+ + +V+
Sbjct: 331 NSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVV 390
Query: 361 NGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNL 420
+GL N+ + +L+ M+ K G +++++ V ++P +D+ W+A+I GYA D+AL
Sbjct: 391 SGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAA 450
Query: 421 FYKMQHVEGLKPDAVVYTSILSAC 444
F M+ VEG+ + + S+LSAC
Sbjct: 451 FQTMR-VEGVSSNYITVVSVLSAC 473
Score = 166 bits (420), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 127/491 (25%), Positives = 235/491 (47%), Gaps = 35/491 (7%)
Query: 74 MYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSA 133
MY+K +R + D MPVR + VSWN+++S R L E + ++M LG++ S+
Sbjct: 1 MYTKFGRVKPARHLFDIMPVR--NEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSS 58
Query: 134 STFVSVVSGCS-----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIF 188
S+V+ C FR+G+ +H V K GLL+ ++ ++ +++ +Y +G V+ +R +F
Sbjct: 59 FVIASLVTACGRSGSMFREGVQVHGFVAKSGLLS-DVYVSTAILHLYGVYGLVSCSRKVF 117
Query: 189 DEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLF 248
+E+ + ++VSWT+++ GY + G E + MR V + +I C + +
Sbjct: 118 EEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDES 177
Query: 249 LALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYA 308
L + ++KSG ++ ++N L+SM G+++ A +FD + E+ W S+ YA
Sbjct: 178 LGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYA 237
Query: 309 QLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQ 368
Q G+ E+ +F + + N T++T LS + G+ I +V G +S
Sbjct: 238 QNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVC 297
Query: 369 VQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVE 428
V +L+ M++ GR +A VF+++P KDL W++++ + G AL L M
Sbjct: 298 VCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMIS-S 356
Query: 429 GLKPDAVVYTSILSACS-----------HSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLV 477
G + V +TS L+AC H +V GL F+ + N LV
Sbjct: 357 GKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGL-FYNQIIGN-----------ALV 404
Query: 478 DLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTG 537
+ G+ G + + + +MP W L+ + + + A + + G +
Sbjct: 405 SMYGKIGEMSESRRVLLQMP-RRDVVAWNALIGGYAEDEDPDKALAAFQTMRV--EGVSS 461
Query: 538 NYILMANLFTS 548
NYI + ++ ++
Sbjct: 462 NYITVVSVLSA 472
Score = 85.5 bits (210), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 116/241 (48%), Gaps = 7/241 (2%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
M+ + ++G EE L S M GV + F+F L A A + + +G+++H +K+G
Sbjct: 536 MLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLG 595
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F+ D+F+ DMYSKC + K+L P RS+ SWN +ISA R +E
Sbjct: 596 FEHDSFIFNAAADMYSKCGEIGEVVKMLP--PSVNRSLPSWNILISALGRHGYFEEVCAT 653
Query: 121 LKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
EM +G++ TFVS+++ CS +G++ + + + L I V+ +
Sbjct: 654 FHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLG 713
Query: 177 KFGKVNEARSIFDEIG-ETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFL 235
+ G++ EA + ++ + + + W +++ GN++ + ++ D V L
Sbjct: 714 RSGRLAEAETFISKMPMKPNDLVWRSLLASCKIHGNLDRGRKAAENLSKLEPEDDSVYVL 773
Query: 236 N 236
+
Sbjct: 774 S 774
>gi|449523774|ref|XP_004168898.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g14850-like [Cucumis sativus]
Length = 606
Score = 323 bits (829), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 181/590 (30%), Positives = 311/590 (52%), Gaps = 9/590 (1%)
Query: 36 VLKACANINSIWDGKRVHSHVLK-VGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVR 94
V++ ++ S G+ H+ +LK + AF+ L++MY+K S++ +L+ P R
Sbjct: 12 VVELAVSVRSSLLGRAAHAQILKTLKTPFPAFLYNHLVNMYAKLDHLNSAKLILELAPCR 71
Query: 95 LRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCSFRQ----GIS 150
SVV+W ++I+ + A+L +M + + TF V+ + + G
Sbjct: 72 --SVVTWTALIAGSVQNGCFVSALLHFSDMLSDCVRPNDFTFPCVLKASTGLRMDTTGKQ 129
Query: 151 MHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVG 210
+H K GL+N ++ + SV MY+K G +N+A +FDE+ ++ +W I V G
Sbjct: 130 LHALAVKEGLIN-DVFVGCSVFDMYSKLGFLNDAYKVFDEMPHRNLETWNAYISNSVLHG 188
Query: 211 NVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDN 270
++ ++ R+ PD + F + C+ L +H +++SGY + N
Sbjct: 189 RPEDSVIAFIELLRVGGKPDSITFCXFLNACSDKLGLGPGCQLHGFIIRSGYGQNVSVSN 248
Query: 271 LLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRP 330
L+ Y KCG++E + VFD + E++ W+S+I Y Q +A LF R K + P
Sbjct: 249 GLIDFYGKCGEVECSEMVFDRMGERNSVSWSSLIAAYVQNNEEEKASCLFLRARKEDIEP 308
Query: 331 NEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVF 390
+ +++ L ACA L + G+ ++ V +E N V ++L+ M+ KCG I+ A++ F
Sbjct: 309 TDFMVSSVLCACAGLSEIEFGRSVQALAVKACVEQNIFVASALVDMYGKCGSIDNAEQAF 368
Query: 391 ERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMV 450
+P+++L W+A++ GYA G ++A+ L +M G+ P V LSACS +G +
Sbjct: 369 NAMPERNLVSWNALLGGYAHQGHANKAVALLEEMTSAAGIVPSYVSLICALSACSRAGDL 428
Query: 451 DDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLS 510
G+ F+SM+ +G+EP EHY CLVDLLGRAG + A I MP +W LL
Sbjct: 429 KTGMKIFESMKERYGVEPGPEHYACLVDLLGRAGMVECAYDFIKRMPFPPTISIWGALLG 488
Query: 511 ACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKE 570
AC H ELG+ AA+ L L+P +GN+++++N+F + G W+E R M + + K
Sbjct: 489 ACRMHGKPELGKLAAEKLFELDPKDSGNHVVLSNMFAATGRWEEVTVVRNEMKEVGIKKG 548
Query: 571 PGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKELHIKLLE-AGYIAEAD 619
G+S + +D + +F A D+SH +I+ L +L ++ + AG IA+ +
Sbjct: 549 AGFSWITVDSRIHMFQAKDKSHEKDPEIQDILGKLRKEMQDAAGCIADPN 598
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 119/419 (28%), Positives = 215/419 (51%), Gaps = 10/419 (2%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+I S NG F L +S ML V N FTFP VLKA + GK++H+ +K G
Sbjct: 79 LIAGSVQNGCFVSALLHFSDMLSDCVRPNDFTFPCVLKASTGLRMDTTGKQLHALAVKEG 138
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
D FV + DMYSK + KV DEMP R++ +WN+ IS +++++
Sbjct: 139 LINDVFVGCSVFDMYSKLGFLNDAYKVFDEMP--HRNLETWNAYISNSVLHGRPEDSVIA 196
Query: 121 LKEMWVLGLELSASTFVSVVSGCSFRQGI----SMHCCVYKLGLLNNEIPLANSVMSMYA 176
E+ +G + + TF ++ CS + G+ +H + + G N + ++N ++ Y
Sbjct: 197 FIELLRVGGKPDSITFCXFLNACSDKLGLGPGCQLHGFIIRSGYGQN-VSVSNGLIDFYG 255
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K G+V + +FD +GE + VSW+++I YV +A L + R+ + P + +
Sbjct: 256 KCGEVECSEMVFDRMGERNSVSWSSLIAAYVQNNEEEKASCLFLRARKEDIEPTDFMVSS 315
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
++ CA + + S+ +L +K+ + + LV MY KCG ++ A + F+A+ E++
Sbjct: 316 VLCACAGLSEIEFGRSVQALAVKACVEQNIFVASALVDMYGKCGSIDNAEQAFNAMPERN 375
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTS-VRPNEATLATTLSACAELGSLSKGKEIE 355
+ W +++GGYA G+ ++AV L + + + + P+ +L LSAC+ G L G +I
Sbjct: 376 LVSWNALLGGYAHQGHANKAVALLEEMTSAAGIVPSYVSLICALSACSRAGDLKTGMKIF 435
Query: 356 EYIVLN-GLESNRQVQTSLIHMFSKCGRINKAKEVFERVP-DKDLAVWSAMINGYAIHG 412
E + G+E + L+ + + G + A + +R+P +++W A++ +HG
Sbjct: 436 ESMKERYGVEPGPEHYACLVDLLGRAGMVECAYDFIKRMPFPPTISIWGALLGACRMHG 494
>gi|356540347|ref|XP_003538651.1| PREDICTED: pentatricopeptide repeat-containing protein At5g13270,
chloroplastic-like [Glycine max]
Length = 753
Score = 323 bits (829), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 183/608 (30%), Positives = 307/608 (50%), Gaps = 9/608 (1%)
Query: 6 TNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDA 65
G + +M G+ N ++ + K C + ++ DGK H+ + ++ +
Sbjct: 56 AKQGKLRQVHEFIRNMDIAGISINPRSYEYLFKMCGTLGALSDGKLFHNRLQRMA-NSNK 114
Query: 66 FVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMW 125
F+ ++ MY C F ++ + D+ + R + SW +IISA++ DEA+ + M
Sbjct: 115 FIDNCILQMYCDCKSFTAAERFFDK--IVDRDLSSWATIISAYTEEGRIDEAVGLFLRML 172
Query: 126 VLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKV 181
LG+ + S F +++ + G +H + ++ +I + + +MY K G +
Sbjct: 173 DLGIIPNFSIFSTLIMSFADPSMLDLGKQIHSQLIRIEFAA-DISIETLISNMYVKCGWL 231
Query: 182 NEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGC 241
+ A +++ S V+ T ++ GY +A L ++M V D VF ++ C
Sbjct: 232 DGAEVATNKMTRKSAVACTGLMVGYTQAARNRDALLLFSKMISEGVELDGFVFSIILKAC 291
Query: 242 AQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWT 301
A +G+L+ +HS +K G +E + LV Y KC E AR+ F+++ E + F W+
Sbjct: 292 AALGDLYTGKQIHSYCIKLGLESEVSVGTPLVDFYVKCARFEAARQAFESIHEPNDFSWS 351
Query: 302 SMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLN 361
++I GY Q G A+ +FK + V N AC+ + L G +I +
Sbjct: 352 ALIAGYCQSGKFDRALEVFKTIRSKGVLLNSFIYNNIFQACSAVSDLICGAQIHADAIKK 411
Query: 362 GLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLF 421
GL + ++++I M+SKCG+++ A + F + D W+A+I +A HG +AL LF
Sbjct: 412 GLVAYLSGESAMITMYSKCGKVDYAHQAFLAIDKPDTVAWTAIICAHAYHGKASEALRLF 471
Query: 422 YKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLG 481
+MQ G++P+ V + +L+ACSHSG+V +G F SM +G+ P+I+HY C++D+
Sbjct: 472 KEMQG-SGVRPNVVTFIGLLNACSHSGLVKEGKQFLDSMTDKYGVNPTIDHYNCMIDIYS 530
Query: 482 RAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYIL 541
RAG AL+ I MP E W LL C N+E+G AA N+ L+P + Y++
Sbjct: 531 RAGLLLEALEVIRSMPFEPDVMSWKSLLGGCWSRRNLEIGMIAADNIFRLDPLDSATYVI 590
Query: 542 MANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKT 601
M NL+ AG W EAA R +M +R L KE S + + G V FV GDR H + I
Sbjct: 591 MFNLYALAGKWDEAAQFRKMMAERNLRKEVSCSWIIVKGKVHRFVVGDRHHPQTEQIYSK 650
Query: 602 LKELHIKL 609
LKEL++
Sbjct: 651 LKELNVSF 658
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 102/210 (48%), Gaps = 7/210 (3%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+I +G F+ L + ++ GV NSF + + +AC+ ++ + G ++H+ +K G
Sbjct: 353 LIAGYCQSGKFDRALEVFKTIRSKGVLLNSFIYNNIFQACSAVSDLICGAQIHADAIKKG 412
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
++ +I MYSKC + + + + V+W +II AH+ EA+ +
Sbjct: 413 LVAYLSGESAMITMYSKCGKVDYAHQAF--LAIDKPDTVAWTAIICAHAYHGKASEALRL 470
Query: 121 LKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
KEM G+ + TF+ +++ CS ++G + +N I N ++ +Y+
Sbjct: 471 FKEMQGSGVRPNVVTFIGLLNACSHSGLVKEGKQFLDSMTDKYGVNPTIDHYNCMIDIYS 530
Query: 177 KFGKVNEARSIFDEIG-ETSIVSWTTIIGG 205
+ G + EA + + E ++SW +++GG
Sbjct: 531 RAGLLLEALEVIRSMPFEPDVMSWKSLLGG 560
>gi|334182623|ref|NP_001185013.1| PPR repeat domain-containing protein [Arabidopsis thaliana]
gi|332191339|gb|AEE29460.1| PPR repeat domain-containing protein [Arabidopsis thaliana]
Length = 928
Score = 323 bits (829), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 178/617 (28%), Positives = 334/617 (54%), Gaps = 9/617 (1%)
Query: 6 TNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDA 65
NG EE+ +S M + NS T +L +++ G+ +H V+K+GF
Sbjct: 220 AQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVV 279
Query: 66 FVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMW 125
V L+ MY+ V + V +MP + ++SWNS++++ + +A+ +L M
Sbjct: 280 CVCNTLLRMYAGAGRSVEANLVFKQMPTK--DLISWNSLMASFVNDGRSLDALGLLCSMI 337
Query: 126 VLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKV 181
G ++ TF S ++ C F +G +H V GL N+I + N+++SMY K G++
Sbjct: 338 SSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQI-IGNALVSMYGKIGEM 396
Query: 182 NEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGC 241
+E+R + ++ +V+W +IGGY + ++A MR V+ + + ++++ C
Sbjct: 397 SESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSAC 456
Query: 242 AQVGNLF-LALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLW 300
G+L +H+ ++ +G+ +++ + N L++MY KCGDL ++ +F+ + +++ W
Sbjct: 457 LLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITW 516
Query: 301 TSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVL 360
+M+ A G+ E + L ++ V ++ + + LSA A+L L +G+++ V
Sbjct: 517 NAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVK 576
Query: 361 NGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNL 420
G E + + + M+SKCG I + ++ ++ L W+ +I+ HG ++
Sbjct: 577 LGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCAT 636
Query: 421 FYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLL 480
F++M + G+KP V + S+L+ACSH G+VD GL+++ + +FG+EP+IEH +C++DLL
Sbjct: 637 FHEMLEM-GIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLL 695
Query: 481 GRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYI 540
GR+GR A I +MP++ VW LL++C H N++ G AA+NL L P Y+
Sbjct: 696 GRSGRLAEAETFISKMPMKPNDLVWRSLLASCKIHGNLDRGRKAAENLSKLEPEDDSVYV 755
Query: 541 LMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRK 600
L +N+F + G W++ R M + + K+ S V++ V F GDR+H +++I
Sbjct: 756 LSSNMFATTGRWEDVENVRKQMGFKNIKKKQACSWVKLKDKVSSFGIGDRTHPQTMEIYA 815
Query: 601 TLKELHIKLLEAGYIAE 617
L+++ + E+GY+A+
Sbjct: 816 KLEDIKKLIKESGYVAD 832
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 124/441 (28%), Positives = 219/441 (49%), Gaps = 9/441 (2%)
Query: 9 GSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIW-DGKRVHSHVLKVGFQQDAFV 67
G + E + + M G+ +SF ++ AC S++ +G +VH V K G D +V
Sbjct: 20 GLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYV 79
Query: 68 QTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVL 127
T ++ +Y SRKV +EMP R+VVSW S++ +S +E I + K M
Sbjct: 80 STAILHLYGVYGLVSCSRKVFEEMPD--RNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGE 137
Query: 128 GLELSASTFVSVVSGCSFRQ----GISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNE 183
G+ + ++ V+S C + G + V K G L +++ + NS++SM G V+
Sbjct: 138 GVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSG-LESKLAVENSLISMLGSMGNVDY 196
Query: 184 ARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQ 243
A IFD++ E +SW +I Y G++ E+F + + MRR + L+
Sbjct: 197 ANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGH 256
Query: 244 VGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSM 303
V + +H L++K G+++ + N L+ MY G A VF + K + W S+
Sbjct: 257 VDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSL 316
Query: 304 IGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGL 363
+ + G +A+ L ++ + N T + L+AC KG+ + +V++GL
Sbjct: 317 MASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGL 376
Query: 364 ESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYK 423
N+ + +L+ M+ K G +++++ V ++P +D+ W+A+I GYA D+AL F
Sbjct: 377 FYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQT 436
Query: 424 MQHVEGLKPDAVVYTSILSAC 444
M+ VEG+ + + S+LSAC
Sbjct: 437 MR-VEGVSSNYITVVSVLSAC 456
Score = 158 bits (399), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 122/474 (25%), Positives = 227/474 (47%), Gaps = 35/474 (7%)
Query: 91 MPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCS-----F 145
MPVR + VSWN+++S R L E + ++M LG++ S+ S+V+ C F
Sbjct: 1 MPVR--NEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMF 58
Query: 146 RQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGG 205
R+G+ +H V K GLL+ ++ ++ +++ +Y +G V+ +R +F+E+ + ++VSWT+++ G
Sbjct: 59 REGVQVHGFVAKSGLLS-DVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVG 117
Query: 206 YVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNE 265
Y + G E + MR V + +I C + + L + ++KSG ++
Sbjct: 118 YSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESK 177
Query: 266 DPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLK 325
++N L+SM G+++ A +FD + E+ W S+ YAQ G+ E+ +F + +
Sbjct: 178 LAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRR 237
Query: 326 TSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINK 385
N T++T LS + G+ I +V G +S V +L+ M++ GR +
Sbjct: 238 FHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVE 297
Query: 386 AKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACS 445
A VF+++P KDL W++++ + G AL L M G + V +TS L+AC
Sbjct: 298 ANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMIS-SGKSVNYVTFTSALAACF 356
Query: 446 -----------HSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIH 494
H +V GL F+ + N LV + G+ G + + +
Sbjct: 357 TPDFFEKGRILHGLVVVSGL-FYNQIIGN-----------ALVSMYGKIGEMSESRRVLL 404
Query: 495 EMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTS 548
+MP W L+ + + + A + + G + NYI + ++ ++
Sbjct: 405 QMP-RRDVVAWNALIGGYAEDEDPDKALAAFQTMRV--EGVSSNYITVVSVLSA 455
Score = 85.5 bits (210), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 116/241 (48%), Gaps = 7/241 (2%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
M+ + ++G EE L S M GV + F+F L A A + + +G+++H +K+G
Sbjct: 519 MLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLG 578
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F+ D+F+ DMYSKC + K+L P RS+ SWN +ISA R +E
Sbjct: 579 FEHDSFIFNAAADMYSKCGEIGEVVKMLP--PSVNRSLPSWNILISALGRHGYFEEVCAT 636
Query: 121 LKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
EM +G++ TFVS+++ CS +G++ + + + L I V+ +
Sbjct: 637 FHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLG 696
Query: 177 KFGKVNEARSIFDEIG-ETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFL 235
+ G++ EA + ++ + + + W +++ GN++ + ++ D V L
Sbjct: 697 RSGRLAEAETFISKMPMKPNDLVWRSLLASCKIHGNLDRGRKAAENLSKLEPEDDSVYVL 756
Query: 236 N 236
+
Sbjct: 757 S 757
>gi|147805932|emb|CAN74403.1| hypothetical protein VITISV_043633 [Vitis vinifera]
Length = 841
Score = 323 bits (829), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 188/621 (30%), Positives = 310/621 (49%), Gaps = 32/621 (5%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI + G + + L + ML V + T + ++ACA + S+ GK++H +K
Sbjct: 233 MISGYYDVGDYFKALELFVQMLVDEVKFDCVTMLVAVQACAELGSLKLGKQIHQLAIKFE 292
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F +D ++ L++MYS SS ++ + +P R + WNS+ISA++ ++EA+ +
Sbjct: 293 FVEDLYILNALLNMYSNNGSLESSHQLFESVPNRDAPL--WNSMISAYAAFGCHEEAMDL 350
Query: 121 LKEMWVLGLELSASTFVSVVSGCS-----FRQGISMHCCVYKLGLLNNEIPLANSVMSMY 175
M G++ T V ++S C +G S+H V K G+ + L N+++SMY
Sbjct: 351 FIRMQSEGVKKDERTVVIMLSMCEELASGLLKGKSLHAHVIKSGM-RIDASLGNALLSMY 409
Query: 176 AKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFL 235
+ V + IFD + I+SW T+I +A L +MR + P+ +
Sbjct: 410 TELNCVESVQKIFDRMKGVDIISWNTMILALARNTLRAQACELFERMRESEIKPNSYTII 469
Query: 236 NLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEK 295
+++ C V L S+H ++K PL L MY CGD AR +F+ ++
Sbjct: 470 SILAACEDVTCLDFGRSIHGYVMKHSIEINQPLRTALADMYMNCGDEATARDLFEGCPDR 529
Query: 296 SVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIE 355
+ W +MI PN T+ LS+ L +L +G+ +
Sbjct: 530 DLISWNAMI---------------------XKAEPNSVTIINVLSSFTHLATLPQGQSLH 568
Query: 356 EYIVLNG--LESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGM 413
Y+ G L + + + I M+++CG + A+ +F+ +P +++ W+AMI GY ++G
Sbjct: 569 AYVTRRGFSLGLDLSLANAFITMYARCGSLQSAENIFKTLPKRNIISWNAMIAGYGMNGR 628
Query: 414 GDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHY 473
G A+ F +M +G +P+ V + S+LSACSHSG ++ GL F SM +F + P + HY
Sbjct: 629 GSDAMLAFSQMLE-DGFRPNGVTFVSVLSACSHSGFIEMGLQLFHSMVQDFNVTPELVHY 687
Query: 474 LCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNP 533
C+VDLL R G D A + I MP+E A VW LLS+C + + + + + L L P
Sbjct: 688 SCIVDLLARGGCIDEAREFIDSMPIEPDASVWRALLSSCRAYSDAKQAKTIFEKLDKLEP 747
Query: 534 GSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHH 593
+ GNY+L++N++ +AG+W E R + ++ L K PG S + + V F AGDRSH
Sbjct: 748 MNAGNYVLLSNVYATAGLWLEVRRIRTWLKEKGLRKPPGISWIIVKNQVHCFSAGDRSHP 807
Query: 594 LSVDIRKTLKELHIKLLEAGY 614
S I L L + E GY
Sbjct: 808 QSDKIYAKLSILLSSMRETGY 828
Score = 223 bits (569), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 142/460 (30%), Positives = 242/460 (52%), Gaps = 9/460 (1%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+I++ N + + LS Y+ M GV N+ T PLVLKACA N++ GK +H +
Sbjct: 31 VIKHQANLKNDQAILSAYTQMESLGVLPNNTTLPLVLKACAAQNAVERGKSIHRSIQGTD 90
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
D V T ++D Y KC +R V D M R VV WN+++ + +EA+L+
Sbjct: 91 LMDDVRVGTAVVDFYCKCGFVEDARCVFDAMSDR--DVVLWNAMVYGYVGWGCYEEAMLL 148
Query: 121 LKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
++EM L ++ T V+++ C R G +H + G+ ++ +A +++ Y
Sbjct: 149 VREMGRENLRPNSRTMVALLLACEGASELRLGRGVHGYCLRNGMFDSNPHVATALIGFYL 208
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
+F + +FD + +IVSW +I GY +VG+ +A L QM V D V L
Sbjct: 209 RF-DMRVLPLLFDLMVVRNIVSWNAMISGYYDVGDYFKALELFVQMLVDEVKFDCVTMLV 267
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
+ CA++G+L L +H L +K + + + N L++MY+ G LE + ++F++V +
Sbjct: 268 AVQACAELGSLKLGKQIHQLAIKFEFVEDLYILNALLNMYSNNGSLESSHQLFESVPNRD 327
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGS-LSKGKEIE 355
LW SMI YA G EA++LF R+ V+ +E T+ LS C EL S L KGK +
Sbjct: 328 APLWNSMISAYAAFGCHEEAMDLFIRMQSEGVKKDERTVVIMLSMCEELASGLLKGKSLH 387
Query: 356 EYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGD 415
+++ +G+ + + +L+ M+++ + +++F+R+ D+ W+ MI A + +
Sbjct: 388 AHVIKSGMRIDASLGNALLSMYTELNCVESVQKIFDRMKGVDIISWNTMILALARNTLRA 447
Query: 416 QALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLS 455
QA LF +M+ E +KP++ SIL+AC +D G S
Sbjct: 448 QACELFERMRESE-IKPNSYTIISILAACEDVTCLDFGRS 486
Score = 174 bits (442), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 107/366 (29%), Positives = 194/366 (53%), Gaps = 10/366 (2%)
Query: 85 RKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAIL-VLKEMWVLGLELSASTFVSVVSGC 143
R L ++++ WNS+I H ND+AIL +M LG+ + +T V+ C
Sbjct: 12 RLTLSPTKIQIKDPKHWNSVIK-HQANLKNDQAILSAYTQMESLGVLPNNTTLPLVLKAC 70
Query: 144 ----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSW 199
+ +G S+H + L+ +++ + +V+ Y K G V +AR +FD + + +V W
Sbjct: 71 AAQNAVERGKSIHRSIQGTDLM-DDVRVGTAVVDFYCKCGFVEDARCVFDAMSDRDVVLW 129
Query: 200 TTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLK 259
++ GYV G EA L +M R ++ P+ + L+L C L L +H L+
Sbjct: 130 NAMVYGYVGWGCYEEAMLLVREMGRENLRPNSRTMVALLLACEGASELRLGRGVHGYCLR 189
Query: 260 SGYNNEDP-LDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVN 318
+G + +P + L+ Y + D+ + +FD ++ +++ W +MI GY +G +A+
Sbjct: 190 NGMFDSNPHVATALIGFYLRF-DMRVLPLLFDLMVVRNIVSWNAMISGYYDVGDYFKALE 248
Query: 319 LFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFS 378
LF ++L V+ + T+ + ACAELGSL GK+I + + + + +L++M+S
Sbjct: 249 LFVQMLVDEVKFDCVTMLVAVQACAELGSLKLGKQIHQLAIKFEFVEDLYILNALLNMYS 308
Query: 379 KCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYT 438
G + + ++FE VP++D +W++MI+ YA G ++A++LF +MQ EG+K D
Sbjct: 309 NNGSLESSHQLFESVPNRDAPLWNSMISAYAAFGCHEEAMDLFIRMQS-EGVKKDERTVV 367
Query: 439 SILSAC 444
+LS C
Sbjct: 368 IMLSMC 373
Score = 105 bits (262), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 72/251 (28%), Positives = 123/251 (49%), Gaps = 3/251 (1%)
Query: 199 WTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLL 258
W ++I N+ N QM + V P+ ++ CA + S+H +
Sbjct: 28 WNSVIKHQANLKNDQAILSAYTQMESLGVLPNNTTLPLVLKACAAQNAVERGKSIHRSIQ 87
Query: 259 KSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVN 318
+ ++ + +V Y KCG +E AR VFDA+ ++ V LW +M+ GY G EA+
Sbjct: 88 GTDLMDDVRVGTAVVDFYCKCGFVEDARCVFDAMSDRDVVLWNAMVYGYVGWGCYEEAML 147
Query: 319 LFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGL-ESNRQVQTSLIHMF 377
L + + + ++RPN T+ L AC L G+ + Y + NG+ +SN V T+LI +
Sbjct: 148 LVREMGRENLRPNSRTMVALLLACEGASELRLGRGVHGYCLRNGMFDSNPHVATALIGFY 207
Query: 378 SKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVY 437
+ + +F+ + +++ W+AMI+GY G +AL LF +M V+ +K D V
Sbjct: 208 LRFD-MRVLPLLFDLMVVRNIVSWNAMISGYYDVGDYFKALELFVQML-VDEVKFDCVTM 265
Query: 438 TSILSACSHSG 448
+ AC+ G
Sbjct: 266 LVAVQACAELG 276
>gi|297798624|ref|XP_002867196.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297313032|gb|EFH43455.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 997
Score = 323 bits (829), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 185/617 (29%), Positives = 328/617 (53%), Gaps = 8/617 (1%)
Query: 9 GSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQ 68
G + L + M+++ + + TF LVL ++S+ G++VH LK+G V
Sbjct: 301 GQYSALLKCFMDMVESDLECDQVTFILVLATAVRLDSLALGQQVHCMALKLGLDLMLTVS 360
Query: 69 TGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLG 128
LI+MY K +R V + M R ++SWNS+I+ +++ L EA+ + ++ G
Sbjct: 361 NSLINMYCKLRKIGLARTVFNNMSER--DLISWNSVIAGIAQSDLEVEAVCLFMQLLRCG 418
Query: 129 LELSASTFVSVV-SGCSFRQGISMHCCVYKLGLLNNEIP---LANSVMSMYAKFGKVNEA 184
L+ T SV+ + S +G+S+ ++ + N + ++ +++ Y++ + EA
Sbjct: 419 LKPDHYTMTSVLKAASSLPEGLSLSKQIHVHAIKTNNVADSFVSTALIDAYSRNRCMKEA 478
Query: 185 RSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQV 244
+F +V+W ++ GY + ++ L M + D ++ C +
Sbjct: 479 EVLFGR-NNFDLVAWNAMMSGYTQSHDGHKTLELFALMHKQGERSDDFTLATVLKTCGFL 537
Query: 245 GNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMI 304
+ +H+ +KSGY+ + + + ++ MY KCGD+ A+ FD++ WT++I
Sbjct: 538 FAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTLI 597
Query: 305 GGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLE 364
G + G A+++F ++ V P+E T+AT A + L +L +G++I +
Sbjct: 598 SGCIENGEEERALHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCT 657
Query: 365 SNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKM 424
S+ V TSL+ M++KCG I+ A +F+R+ ++ W+AM+ G A HG G +AL LF +M
Sbjct: 658 SDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKEALQLFKQM 717
Query: 425 QHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAG 484
+ + G+KPD V + +LSACSHSG+V + + +SM ++GI+P IEHY CL D LGRAG
Sbjct: 718 ESL-GIKPDKVTFIGVLSACSHSGLVSEAYKYIRSMHRDYGIKPEIEHYSCLADALGRAG 776
Query: 485 RFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMAN 544
A I M +E A ++ LL+AC + E G+ A LL L P + Y+L++N
Sbjct: 777 LVKEAENLIDSMSMEASASMYRTLLAACRVQGDTETGKRVATKLLELEPLDSSAYVLLSN 836
Query: 545 LFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKE 604
++ +A W E AR +M ++ K+PG+S +E+ + +FV DRS+ + I K +K+
Sbjct: 837 MYAAASKWDEMKLARTMMKGHKVKKDPGFSWIEVKNKIHLFVVDDRSNPQTELIYKKVKD 896
Query: 605 LHIKLLEAGYIAEADIV 621
+ + + GY+ E D
Sbjct: 897 MIRDIKQEGYVPETDFT 913
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 128/512 (25%), Positives = 225/512 (43%), Gaps = 42/512 (8%)
Query: 12 EETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGL 71
+E + + Q V+ + T +LK C + + + H + K+G D FV L
Sbjct: 134 KEAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVCASESFHGYACKIGLDGDDFVAGAL 193
Query: 72 IDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLEL 131
+++Y K R + +EMP R VV WN ++ A+ +EAI +L
Sbjct: 194 VNIYLKFGKVKEGRVLFEEMPYR--DVVLWNLMLKAYLEMGFKEEAI-----------DL 240
Query: 132 SASTFVSVVSGCSFRQGISMHCCVYKLGLLNNEIPLA--NSVMSMYAKFGKVNEARSIFD 189
S++ S GL NEI L + + ++ G+V + D
Sbjct: 241 SSAFHTS--------------------GLHPNEITLRLLSRISGDDSEAGQVKSFENGND 280
Query: 190 EIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFL 249
+ I+S I+ GY++ G + M + D V F+ ++ ++ +L L
Sbjct: 281 ASAVSEIISRNKILSGYLHAGQYSALLKCFMDMVESDLECDQVTFILVLATAVRLDSLAL 340
Query: 250 ALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQ 309
+H + LK G + + N L++MY K + LAR VF+ + E+ + W S+I G AQ
Sbjct: 341 GQQVHCMALKLGLDLMLTVSNSLINMYCKLRKIGLARTVFNNMSERDLISWNSVIAGIAQ 400
Query: 310 LGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGS-LSKGKEIEEYIVLNGLESNRQ 368
EAV LF +LL+ ++P+ T+ + L A + L LS K+I + + ++
Sbjct: 401 SDLEVEAVCLFMQLLRCGLKPDHYTMTSVLKAASSLPEGLSLSKQIHVHAIKTNNVADSF 460
Query: 369 VQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVE 428
V T+LI +S+ R K EV + DL W+AM++GY G + L LF M H +
Sbjct: 461 VSTALIDAYSR-NRCMKEAEVLFGRNNFDLVAWNAMMSGYTQSHDGHKTLELFALM-HKQ 518
Query: 429 GLKPDAVVYTSILSACSHSGMVDDGLSFFK-SMQSNFGIEPSIEHYLCLVDLLGRAGRFD 487
G + D ++L C ++ G +++S + ++ + ++D+ + G
Sbjct: 519 GERSDDFTLATVLKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSS--GILDMYVKCGDMS 576
Query: 488 LALKTIHEMPVEVQAQVWAPLLSACMKHHNVE 519
A +PV W L+S C+++ E
Sbjct: 577 AAQFAFDSIPVPDDV-AWTTLISGCIENGEEE 607
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 108/422 (25%), Positives = 195/422 (46%), Gaps = 48/422 (11%)
Query: 49 GKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAH 108
GK H+ +L + + F+ LI MYSKC +R+V D+MP R +VSWNSI++A+
Sbjct: 65 GKCTHARILALEENPERFLVNNLISMYSKCGSLTYARRVFDKMPE--RDLVSWNSILAAY 122
Query: 109 SRACLN-----DEAILVLKEMWVLGLELSASTFVSVVSGCSFRQGI----SMHCCVYKLG 159
+++ EA L+ + + + S T ++ C + S H K+G
Sbjct: 123 AQSSEGVVENVKEAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVCASESFHGYACKIG 182
Query: 160 LLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLC 219
L ++ +A +++++Y KFGKV E R +F+E+ +V W ++ Y+ +G EA L
Sbjct: 183 LDGDDF-VAGALVNIYLKFGKVKEGRVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLS 241
Query: 220 NQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKC 279
+ + P+ + +L L S + +D ++
Sbjct: 242 SAFHTSGLHPNEI----------------------TLRLLSRISGDD----------SEA 269
Query: 280 GDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTL 339
G ++ DA + ++ GY G S + F ++++ + ++ T L
Sbjct: 270 GQVKSFENGNDASAVSEIISRNKILSGYLHAGQYSALLKCFMDMVESDLECDQVTFILVL 329
Query: 340 SACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLA 399
+ L SL+ G+++ + GL+ V SLI+M+ K +I A+ VF + ++DL
Sbjct: 330 ATAVRLDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKIGLARTVFNNMSERDLI 389
Query: 400 VWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKS 459
W+++I G A + +A+ LF ++ GLKPD TS+L A S + +GLS K
Sbjct: 390 SWNSVIAGIAQSDLEVEAVCLFMQLLRC-GLKPDHYTMTSVLKAASS---LPEGLSLSKQ 445
Query: 460 MQ 461
+
Sbjct: 446 IH 447
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 98/393 (24%), Positives = 178/393 (45%), Gaps = 45/393 (11%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
M+ T + +TL ++ M + G + FT VLK C + +I GK+VH++ +K G
Sbjct: 495 MMSGYTQSHDGHKTLELFALMHKQGERSDDFTLATVLKTCGFLFAINQGKQVHAYAIKSG 554
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+ D +V +G++DMY KC D +++ D +PV V+W ++IS + A+ V
Sbjct: 555 YDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPV--PDDVAWTTLISGCIENGEEERALHV 612
Query: 121 LKEMWVLGL---ELSASTFVSVVSGC--SFRQGISMHCCVYKLGLLNNEIPLANSVMSMY 175
+M ++G+ E + +T S C + QG +H KL ++ + S++ MY
Sbjct: 613 FSQMRLMGVLPDEFTIATLAK-ASSCLTALEQGRQIHANALKLNCTSDPF-VGTSLVDMY 670
Query: 176 AKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFL 235
AK G +++A +F I +I +W ++ G G EA L QM + + PD V F+
Sbjct: 671 AKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKEALQLFKQMESLGIKPDKVTFI 730
Query: 236 NLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEK 295
++ C+ HS L+ Y + SM+ G ++
Sbjct: 731 GVLSACS-----------HSGLVSEAY-------KYIRSMHRDYG------------IKP 760
Query: 296 SVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIE 355
+ ++ + + G EA NL + S+ + + T L+AC G GK +
Sbjct: 761 EIEHYSCLADALGRAGLVKEAENLIDSM---SMEASASMYRTLLAACRVQGDTETGKRVA 817
Query: 356 EYIV-LNGLESNRQVQTSLIHMFSKCGRINKAK 387
++ L L+S+ V S +M++ + ++ K
Sbjct: 818 TKLLELEPLDSSAYVLLS--NMYAAASKWDEMK 848
Score = 101 bits (252), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 101/196 (51%), Gaps = 6/196 (3%)
Query: 246 NLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIG 305
+L L H+ +L N E L N L+SMY+KCG L ARRVFD + E+ + W S++
Sbjct: 61 DLMLGKCTHARILALEENPERFLVNNLISMYSKCGSLTYARRVFDKMPERDLVSWNSILA 120
Query: 306 GYAQ-----LGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVL 360
YAQ + EA LF+ L + V + TL+ L C G + + Y
Sbjct: 121 AYAQSSEGVVENVKEAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVCASESFHGYACK 180
Query: 361 NGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNL 420
GL+ + V +L++++ K G++ + + +FE +P +D+ +W+ M+ Y G ++A++L
Sbjct: 181 IGLDGDDFVAGALVNIYLKFGKVKEGRVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDL 240
Query: 421 FYKMQHVEGLKPDAVV 436
H GL P+ +
Sbjct: 241 SSAF-HTSGLHPNEIT 255
>gi|4966374|gb|AAD34705.1|AC006341_33 >F3O9.28 [Arabidopsis thaliana]
Length = 1027
Score = 323 bits (829), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 178/617 (28%), Positives = 334/617 (54%), Gaps = 9/617 (1%)
Query: 6 TNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDA 65
NG EE+ +S M + NS T +L +++ G+ +H V+K+GF
Sbjct: 327 AQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVV 386
Query: 66 FVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMW 125
V L+ MY+ V + V +MP + ++SWNS++++ + +A+ +L M
Sbjct: 387 CVCNTLLRMYAGAGRSVEANLVFKQMPTK--DLISWNSLMASFVNDGRSLDALGLLCSMI 444
Query: 126 VLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKV 181
G ++ TF S ++ C F +G +H V GL N+I + N+++SMY K G++
Sbjct: 445 SSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQI-IGNALVSMYGKIGEM 503
Query: 182 NEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGC 241
+E+R + ++ +V+W +IGGY + ++A MR V+ + + ++++ C
Sbjct: 504 SESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSAC 563
Query: 242 AQVGNLF-LALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLW 300
G+L +H+ ++ +G+ +++ + N L++MY KCGDL ++ +F+ + +++ W
Sbjct: 564 LLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITW 623
Query: 301 TSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVL 360
+M+ A G+ E + L ++ V ++ + + LSA A+L L +G+++ V
Sbjct: 624 NAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVK 683
Query: 361 NGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNL 420
G E + + + M+SKCG I + ++ ++ L W+ +I+ HG ++
Sbjct: 684 LGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCAT 743
Query: 421 FYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLL 480
F++M + G+KP V + S+L+ACSH G+VD GL+++ + +FG+EP+IEH +C++DLL
Sbjct: 744 FHEMLEM-GIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLL 802
Query: 481 GRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYI 540
GR+GR A I +MP++ VW LL++C H N++ G AA+NL L P Y+
Sbjct: 803 GRSGRLAEAETFISKMPMKPNDLVWRSLLASCKIHGNLDRGRKAAENLSKLEPEDDSVYV 862
Query: 541 LMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRK 600
L +N+F + G W++ R M + + K+ S V++ V F GDR+H +++I
Sbjct: 863 LSSNMFATTGRWEDVENVRKQMGFKNIKKKQACSWVKLKDKVSSFGIGDRTHPQTMEIYA 922
Query: 601 TLKELHIKLLEAGYIAE 617
L+++ + E+GY+A+
Sbjct: 923 KLEDIKKLIKESGYVAD 939
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 123/437 (28%), Positives = 212/437 (48%), Gaps = 26/437 (5%)
Query: 9 GSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIW-DGKRVHSHVLKVGFQQDAFV 67
G + E + + M G+ +SF ++ AC S++ +G +VH V K G D +V
Sbjct: 152 GLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYV 211
Query: 68 QTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVL 127
T ++ +Y SRKV +EMP R+VVSW S++ +S +E I + K+ L
Sbjct: 212 STAILHLYGVYGLVSCSRKVFEEMPD--RNVVSWTSLMVGYSDKGEPEEVIDIYKDE-SL 268
Query: 128 GLELSASTFVSVVSGCSFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSI 187
G RQ I V K G L +++ + NS++SM G V+ A I
Sbjct: 269 G-----------------RQIIGQ---VVKSG-LESKLAVENSLISMLGSMGNVDYANYI 307
Query: 188 FDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNL 247
FD++ E +SW +I Y G++ E+F + + MRR + L+ V +
Sbjct: 308 FDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQ 367
Query: 248 FLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGY 307
+H L++K G+++ + N L+ MY G A VF + K + W S++ +
Sbjct: 368 KWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASF 427
Query: 308 AQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNR 367
G +A+ L ++ + N T + L+AC KG+ + +V++GL N+
Sbjct: 428 VNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQ 487
Query: 368 QVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHV 427
+ +L+ M+ K G +++++ V ++P +D+ W+A+I GYA D+AL F M+ V
Sbjct: 488 IIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMR-V 546
Query: 428 EGLKPDAVVYTSILSAC 444
EG+ + + S+LSAC
Sbjct: 547 EGVSSNYITVVSVLSAC 563
Score = 161 bits (408), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 130/516 (25%), Positives = 242/516 (46%), Gaps = 60/516 (11%)
Query: 49 GKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAH 108
G+ VH+ +K + LI+MY+K +R + D MPVR + VSWN+++S
Sbjct: 91 GRAVHALCVKGLVRLSVLHTNTLINMYTKFGRVKPARHLFDIMPVR--NEVSWNTMMSGI 148
Query: 109 SRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCS-----FRQGISMHCCVYKLGLLNN 163
R L E + ++M LG++ S+ S+V+ C FR+G+ +H V K GLL+
Sbjct: 149 VRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQVHGFVAKSGLLS- 207
Query: 164 EIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMR 223
++ ++ +++ +Y +G V+ +R +F+E+ + ++VSWT+++ GY + G E
Sbjct: 208 DVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEV-------- 259
Query: 224 RMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLE 283
+ ++ + LG +G + +KSG ++ ++N L+SM G+++
Sbjct: 260 -------IDIYKDESLGRQIIGQV----------VKSGLESKLAVENSLISMLGSMGNVD 302
Query: 284 LARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACA 343
A +FD + E+ W S+ YAQ G+ E+ +F + + N T++T LS
Sbjct: 303 YANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLG 362
Query: 344 ELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSA 403
+ G+ I +V G +S V +L+ M++ GR +A VF+++P KDL W++
Sbjct: 363 HVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNS 422
Query: 404 MINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACS-----------HSGMVDD 452
++ + G AL L M G + V +TS L+AC H +V
Sbjct: 423 LMASFVNDGRSLDALGLLCSMIS-SGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVS 481
Query: 453 GLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSAC 512
GL F+ + N LV + G+ G + + + +MP W L+
Sbjct: 482 GL-FYNQIIGN-----------ALVSMYGKIGEMSESRRVLLQMP-RRDVVAWNALIGGY 528
Query: 513 MKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTS 548
+ + + A + + G + NYI + ++ ++
Sbjct: 529 AEDEDPDKALAAFQTMRV--EGVSSNYITVVSVLSA 562
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 116/241 (48%), Gaps = 7/241 (2%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
M+ + ++G EE L S M GV + F+F L A A + + +G+++H +K+G
Sbjct: 626 MLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLG 685
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F+ D+F+ DMYSKC + K+L P RS+ SWN +ISA R +E
Sbjct: 686 FEHDSFIFNAAADMYSKCGEIGEVVKMLP--PSVNRSLPSWNILISALGRHGYFEEVCAT 743
Query: 121 LKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
EM +G++ TFVS+++ CS +G++ + + + L I V+ +
Sbjct: 744 FHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLG 803
Query: 177 KFGKVNEARSIFDEIG-ETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFL 235
+ G++ EA + ++ + + + W +++ GN++ + ++ D V L
Sbjct: 804 RSGRLAEAETFISKMPMKPNDLVWRSLLASCKIHGNLDRGRKAAENLSKLEPEDDSVYVL 863
Query: 236 N 236
+
Sbjct: 864 S 864
>gi|356521639|ref|XP_003529461.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03380,
mitochondrial-like [Glycine max]
Length = 699
Score = 323 bits (828), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 202/556 (36%), Positives = 299/556 (53%), Gaps = 14/556 (2%)
Query: 33 FPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMP 92
F +V K+CA H H +K D+FV T L+D Y+K + + + DE+
Sbjct: 136 FSIVFKSCAESRDFQTLTITHCHFVK-SLPSDSFVLTCLVDAYAKFARVDEATRAFDEIH 194
Query: 93 VRLRSVVSWNSIISAHSRACLNDEAILV---LKEMWVLGLELSASTFVSVVSGCSF-RQG 148
VVSW S+I A+ + E + + ++E +V G E + + VS + ++ QG
Sbjct: 195 EN-DDVVSWTSMIVAYVQNDCAREGLTLFNRMREAFVDGNEFTVGSLVSACTKLNWLHQG 253
Query: 149 ISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETS----IVSWTTIIG 204
+H V K G+ N L S+++MY K G + +A +FDE +S +VSWT +I
Sbjct: 254 KWVHGFVIKNGICVNSY-LTTSLLNMYVKCGNIQDACKVFDESSSSSYDRDLVSWTAMIV 312
Query: 205 GYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNN 264
GY G + A L + + P+ V +L+ CAQ+GN + +H L +K G ++
Sbjct: 313 GYSQRGYPHLALELFKDKKWSGILPNSVTVSSLLSSCAQLGNSVMGKLLHGLAVKCGLDD 372
Query: 265 EDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLL 324
P+ N LV MY KCG + AR VF+A+LEK V W S+I G+ Q G EA+NLF+R+
Sbjct: 373 H-PVRNALVDMYAKCGVVSDARCVFEAMLEKDVVSWNSIISGFVQSGEAYEALNLFRRMG 431
Query: 325 KTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLE-SNRQVQTSLIHMFSKCGRI 383
P+ T+ LSACA LG L G + + +GL S+ V T+L++ ++KCG
Sbjct: 432 LELFSPDAVTVVGILSACASLGMLHLGCSVHGLALKDGLVVSSIYVGTALLNFYAKCGDA 491
Query: 384 NKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSA 443
A+ VF+ + +K+ W AMI GY + G G+ +L LF M E ++P+ VV+T+IL+A
Sbjct: 492 RAARMVFDSMGEKNAVTWGAMIGGYGMQGDGNGSLTLFRDMLE-ELVEPNEVVFTTILAA 550
Query: 444 CSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQ 503
CSHSGMV +G F M PS++HY C+VD+L RAG + AL I MPV+
Sbjct: 551 CSHSGMVGEGSRLFNLMCGELNFVPSMKHYACMVDMLARAGNLEEALDFIERMPVQPSVS 610
Query: 504 VWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMD 563
V+ L C H ELG A K +L L+P Y+L++NL+ S G W R ++
Sbjct: 611 VFGAFLHGCGLHSRFELGGAAIKKMLELHPDEACYYVLVSNLYASDGRWGMVKQVREMIK 670
Query: 564 DRRLTKEPGWSQVEID 579
R L K PG S VE+D
Sbjct: 671 QRGLNKVPGCSSVEMD 686
Score = 204 bits (518), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 140/452 (30%), Positives = 232/452 (51%), Gaps = 16/452 (3%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI N E L+ ++ M + V GN FT ++ AC +N + GK VH V+K G
Sbjct: 205 MIVAYVQNDCAREGLTLFNRMREAFVDGNEFTVGSLVSACTKLNWLHQGKWVHGFVIKNG 264
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRL--RSVVSWNSIISAHSRACLNDEAI 118
++++ T L++MY KC + + KV DE R +VSW ++I +S+ A+
Sbjct: 265 ICVNSYLTTSLLNMYVKCGNIQDACKVFDESSSSSYDRDLVSWTAMIVGYSQRGYPHLAL 324
Query: 119 LVLKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSM 174
+ K+ G+ ++ T S++S C+ G +H K GL ++ P+ N+++ M
Sbjct: 325 ELFKDKKWSGILPNSVTVSSLLSSCAQLGNSVMGKLLHGLAVKCGL--DDHPVRNALVDM 382
Query: 175 YAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVF 234
YAK G V++AR +F+ + E +VSW +II G+V G EA L +M +PD V
Sbjct: 383 YAKCGVVSDARCVFEAMLEKDVVSWNSIISGFVQSGEAYEALNLFRRMGLELFSPDAVTV 442
Query: 235 LNLILGCAQVGNLFLALSMHSLLLKSGY-NNEDPLDNLLVSMYTKCGDLELARRVFDAVL 293
+ ++ CA +G L L S+H L LK G + + L++ Y KCGD AR VFD++
Sbjct: 443 VGILSACASLGMLHLGCSVHGLALKDGLVVSSIYVGTALLNFYAKCGDARAARMVFDSMG 502
Query: 294 EKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKE 353
EK+ W +MIGGY G + ++ LF+ +L+ V PNE T L+AC+ G + +G
Sbjct: 503 EKNAVTWGAMIGGYGMQGDGNGSLTLFRDMLEELVEPNEVVFTTILAACSHSGMVGEGSR 562
Query: 354 IEEYIV--LNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVP-DKDLAVWSAMINGYAI 410
+ + LN + S + ++ M ++ G + +A + ER+P ++V+ A ++G +
Sbjct: 563 LFNLMCGELNFVPSMKH-YACMVDMLARAGNLEEALDFIERMPVQPSVSVFGAFLHGCGL 621
Query: 411 HGMGDQALNLFYKMQHVEGLKPDAVVYTSILS 442
H + KM L PD Y ++S
Sbjct: 622 HSRFELGGAAIKKMLE---LHPDEACYYVLVS 650
Score = 183 bits (464), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 135/431 (31%), Positives = 226/431 (52%), Gaps = 24/431 (5%)
Query: 38 KACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRS 97
+ C N+ S+ K +H+ L G D + T L+ +Y+ +RK+ + +P R
Sbjct: 41 RLCTNLPSL---KTLHASFLIHGLTNDLLLSTKLLSLYASFGQLRHARKIFNHLPT--RD 95
Query: 98 VVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCSFR--------QGI 149
+ + +I A+ LND V+ ++ L L + V+ F+ Q +
Sbjct: 96 LYCFKVMIRAYF---LNDTPSGVVSLYRLMRLSLHPTPHDYVLFSIVFKSCAESRDFQTL 152
Query: 150 SMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGET-SIVSWTTIIGGYVN 208
++ C + L ++ L ++ YAKF +V+EA FDEI E +VSWT++I YV
Sbjct: 153 TITHCHFVKSLPSDSFVL-TCLVDAYAKFARVDEATRAFDEIHENDDVVSWTSMIVAYVQ 211
Query: 209 VGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPL 268
E L N+MR V + +L+ C ++ L +H ++K+G L
Sbjct: 212 NDCAREGLTLFNRMREAFVDGNEFTVGSLVSACTKLNWLHQGKWVHGFVIKNGICVNSYL 271
Query: 269 DNLLVSMYTKCGDLELARRVFD----AVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLL 324
L++MY KCG+++ A +VFD + ++ + WT+MI GY+Q GYP A+ LFK
Sbjct: 272 TTSLLNMYVKCGNIQDACKVFDESSSSSYDRDLVSWTAMIVGYSQRGYPHLALELFKDKK 331
Query: 325 KTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRIN 384
+ + PN T+++ LS+CA+LG+ GK + V GL+ + V+ +L+ M++KCG ++
Sbjct: 332 WSGILPNSVTVSSLLSSCAQLGNSVMGKLLHGLAVKCGLD-DHPVRNALVDMYAKCGVVS 390
Query: 385 KAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSAC 444
A+ VFE + +KD+ W+++I+G+ G +ALNLF +M +E PDAV ILSAC
Sbjct: 391 DARCVFEAMLEKDVVSWNSIISGFVQSGEAYEALNLFRRMG-LELFSPDAVTVVGILSAC 449
Query: 445 SHSGMVDDGLS 455
+ GM+ G S
Sbjct: 450 ASLGMLHLGCS 460
Score = 47.4 bits (111), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 39/175 (22%), Positives = 79/175 (45%), Gaps = 14/175 (8%)
Query: 342 CAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVW 401
C L SL K + +++GL ++ + T L+ +++ G++ A+++F +P +DL +
Sbjct: 43 CTNLPSL---KTLHASFLIHGLTNDLLLSTKLLSLYASFGQLRHARKIFNHLPTRDLYCF 99
Query: 402 SAMINGYAIHGMGDQALNLFYKMQHVEGLKP-DAVVYTSILSACSHS----GMVDDGLSF 456
MI Y ++ ++L+ M+ P D V+++ + +C+ S + F
Sbjct: 100 KVMIRAYFLNDTPSGVVSLYRLMRLSLHPTPHDYVLFSIVFKSCAESRDFQTLTITHCHF 159
Query: 457 FKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSA 511
KS+ S+ + CLVD + R D A + E+ W ++ A
Sbjct: 160 VKSLPSDSFV------LTCLVDAYAKFARVDEATRAFDEIHENDDVVSWTSMIVA 208
>gi|297746037|emb|CBI16093.3| unnamed protein product [Vitis vinifera]
Length = 702
Score = 323 bits (828), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 189/601 (31%), Positives = 318/601 (52%), Gaps = 78/601 (12%)
Query: 36 VLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRL 95
L C + G+R H V+K+G D FV T LIDMY+KC + S+ +V D+M
Sbjct: 119 ALSFCGREGCVELGRRWHCFVVKIGLGSDEFVCTSLIDMYAKCGEVDSAVRVYDKMTS-- 176
Query: 96 RSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGC----SFRQGISM 151
+ N +ISA++R +A V ++ +G + T+ ++++ C + ++G +
Sbjct: 177 LDAATCNCLISAYARNGFFVQAFQVFMQIGNMGTRPNHYTYSTMLAVCGTISAIQEGKQL 236
Query: 152 HCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGN 211
H V K+ L +E + N+++++Y+K G + EA +F+ +G+ +I+SWT I G+ G+
Sbjct: 237 HAHVVKMQYL-SETAVGNALLTLYSKCGMMEEAEIVFENLGQRNIISWTASINGFYQHGD 295
Query: 212 VNEAFGLCNQMRRMSVTPDLVVFLNLILGCA-------------------QVGNLFLALS 252
+A + MR + P+ F ++ C + ++FL
Sbjct: 296 FKKALKQFSMMRESGIEPNEFTFSIVLASCGCDLGKWMKQRTSSNRWGGQHLMSIFLLRK 355
Query: 253 M------------------------------------HSLLLKSGYNNEDPLDNLLVSMY 276
M H+++LK+ + ++ + + L+ MY
Sbjct: 356 MIEEGNKPTSLRPNQFVLPSILKACGHLSDRRTGENMHTVILKNSFESDAYIISALIYMY 415
Query: 277 TKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLA 336
+KCG +E A RVFD + +V W ++I G++Q +L P+ T++
Sbjct: 416 SKCGHVEKACRVFDWI--PNVVSWNTLIAGFSQ-------------MLDQGFCPSSVTIS 460
Query: 337 TTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDK 396
+ L AC + +L GKEI Y ++ G+E + V+++L+ M++KCG I++AK +F +P++
Sbjct: 461 SLLPACTNVANLRHGKEIHGYAMVIGVEKDVYVRSALVDMYAKCGYISEAKILFYMMPER 520
Query: 397 DLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSF 456
+ W+++I GYA HG ++A+ LF +M+ + K D + +T++L+ACSH+GMV+ G S
Sbjct: 521 NTVTWNSLIFGYANHGYCNEAIELFNQMEESD-TKLDHLTFTAVLNACSHAGMVELGESL 579
Query: 457 FKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHH 516
F+ MQ + IEP +EHY C+VDLLGRAG+ A I MPVE VW LL AC H
Sbjct: 580 FRKMQEKYRIEPRLEHYACMVDLLGRAGKLSEAYDLIKAMPVEPDKFVWGALLGACRNHG 639
Query: 517 NVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQV 576
N+EL E AA++L L P S G+ +L++NL+ AG W AA + +M R+ K PG S +
Sbjct: 640 NIELAEVAAEHLFELEPESPGSSLLLSNLYADAGRWGNAAKMKKMMKQRKFGKFPGCSWI 699
Query: 577 E 577
E
Sbjct: 700 E 700
Score = 121 bits (304), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 83/289 (28%), Positives = 147/289 (50%), Gaps = 26/289 (8%)
Query: 24 TGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVS 83
T + N F P +LKAC +++ G+ +H+ +LK F+ DA++ + LI MYSKC
Sbjct: 364 TSLRPNQFVLPSILKACGHLSDRRTGENMHTVILKNSFESDAYIISALIYMYSKCGHVEK 423
Query: 84 SRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGC 143
+ +V D +P +VVSWN++I+ S +M G S+ T S++ C
Sbjct: 424 ACRVFDWIP----NVVSWNTLIAGFS-------------QMLDQGFCPSSVTISSLLPAC 466
Query: 144 S----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSW 199
+ R G +H +G + ++ + ++++ MYAK G ++EA+ +F + E + V+W
Sbjct: 467 TNVANLRHGKEIHGYAMVIG-VEKDVYVRSALVDMYAKCGYISEAKILFYMMPERNTVTW 525
Query: 200 TTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLK 259
++I GY N G NEA L NQM D + F ++ C+ G + L S+ ++
Sbjct: 526 NSLIFGYANHGYCNEAIELFNQMEESDTKLDHLTFTAVLNACSHAGMVELGESLFR-KMQ 584
Query: 260 SGYNNEDPLDN--LLVSMYTKCGDLELARRVFDAV-LEKSVFLWTSMIG 305
Y E L++ +V + + G L A + A+ +E F+W +++G
Sbjct: 585 EKYRIEPRLEHYACMVDLLGRAGKLSEAYDLIKAMPVEPDKFVWGALLG 633
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 74/272 (27%), Positives = 130/272 (47%), Gaps = 35/272 (12%)
Query: 10 SFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQT 69
S+ ++ +S ML G +S T +L AC N+ ++ GK +H + + +G ++D +V++
Sbjct: 436 SWNTLIAGFSQMLDQGFCPSSVTISSLLPACTNVANLRHGKEIHGYAMVIGVEKDVYVRS 495
Query: 70 GLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGL 129
L+DMY+KC ++S K+L M + R+ V+WNS+I ++ +EAI + +M
Sbjct: 496 ALVDMYAKCG-YISEAKILFYM-MPERNTVTWNSLIFGYANHGYCNEAIELFNQMEESDT 553
Query: 130 ELSASTFVSVVSGCSFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFD 189
+L TF +V++ CS H + +LG + F K+ E I
Sbjct: 554 KLDHLTFTAVLNACS-------HAGMVELG---------------ESLFRKMQEKYRI-- 589
Query: 190 EIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFL 249
E + + ++ G ++EA+ L ++ M V PD V+ L+ C GN+ L
Sbjct: 590 ---EPRLEHYACMVDLLGRAGKLSEAYDL---IKAMPVEPDKFVWGALLGACRNHGNIEL 643
Query: 250 ALSMHSLLLKSGYNNEDPLDNLLVS-MYTKCG 280
A L + E P +LL+S +Y G
Sbjct: 644 AEVAAEHLFE--LEPESPGSSLLLSNLYADAG 673
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 69/124 (55%), Gaps = 1/124 (0%)
Query: 330 PNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEV 389
P+ + + LS C G + G+ ++V GL S+ V TSLI M++KCG ++ A V
Sbjct: 111 PHRQYVFSALSFCGREGCVELGRRWHCFVVKIGLGSDEFVCTSLIDMYAKCGEVDSAVRV 170
Query: 390 FERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGM 449
++++ D A + +I+ YA +G QA +F ++ ++ G +P+ Y+++L+ C
Sbjct: 171 YDKMTSLDAATCNCLISAYARNGFFVQAFQVFMQIGNM-GTRPNHYTYSTMLAVCGTISA 229
Query: 450 VDDG 453
+ +G
Sbjct: 230 IQEG 233
>gi|413953302|gb|AFW85951.1| hypothetical protein ZEAMMB73_518426 [Zea mays]
Length = 620
Score = 323 bits (828), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 191/588 (32%), Positives = 326/588 (55%), Gaps = 44/588 (7%)
Query: 41 ANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVS 100
A +WD +++ ++D T L+ Y++ +R + D R R+VV+
Sbjct: 51 AAAGRVWDARKLFDGTP----ERDVVSWTALVSAYARRGMLRDARSLFDRSDAR-RNVVT 105
Query: 101 WNSIISAHSRACLNDEAILVLKEM-------WVLGLELSASTFVSVVSGCSFRQGISMHC 153
W +++S ++RA L DEA ++ + M W LE A V+G R G + C
Sbjct: 106 WTALLSGYARAGLVDEAEVLFQRMPQRNVVSWNTMLEAYA------VAG---RAGDA--C 154
Query: 154 CVYKLGLLNNEIPLA-----NSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVN 208
++ + +P+ N +++M + G V++AR +F + E +++WTT++ G
Sbjct: 155 ALF------DRMPVRDAGSWNILLAMLVRSGSVDKARELFGRMPERDVMAWTTMVDGVAR 208
Query: 209 VGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPL 268
GNV+EA L + M +V V + +I G + L AL + + + + +
Sbjct: 209 SGNVDEARLLFDSMPERNV----VSWNAMISGYTRNHRLDEALDLFTKM----PHRDIAS 260
Query: 269 DNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSV 328
N++++ + + DL+ AR++FD + E++V WT+M+ GY + ++ LF+ +L + +
Sbjct: 261 CNIMITGFIQNKDLKRARKLFDEMPERNVVTWTTMMNGYLKGKQSELSLGLFRGMLMSGI 320
Query: 329 RPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKE 388
RPN+ T L AC++L +L +GK++ + I + + V ++L+++++KCG + A++
Sbjct: 321 RPNQVTFLGALDACSDLATLCEGKQVHQMICKTAFQVDTFVGSALMNVYAKCGEVGLARK 380
Query: 389 VFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSG 448
+F+ +KDL W+ +I YA HG+G +A++L+ KMQ G +P+ V Y +LSACSHSG
Sbjct: 381 LFDLSREKDLISWNGIIAAYAHHGVGIEAIHLYEKMQG-NGYRPNDVTYVVLLSACSHSG 439
Query: 449 MVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVE-VQAQVWAP 507
+VD+GL F+SM ++ I EHY CL+DL RAGR D A + IH + ++ VW+
Sbjct: 440 LVDEGLKIFESMVNDRSIAVRDEHYTCLIDLCSRAGRLDDAKRLIHYLKIKPASGSVWSA 499
Query: 508 LLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRL 567
LL C H N +G AA+NL+ P + G Y L++N++ SAG WKEAA R M++R L
Sbjct: 500 LLGGCNAHGNESIGNLAARNLIQAEPDNAGTYTLLSNIYASAGKWKEAAEIRSEMNNRGL 559
Query: 568 TKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKELHIKLLEAGYI 615
K+PG S +E+ V VFVA D+SH S I L+ +H + G +
Sbjct: 560 KKQPGCSWIEVANKVHVFVARDKSHSESDLIYGLLQNIHYMMRIVGTV 607
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 89/391 (22%), Positives = 181/391 (46%), Gaps = 50/391 (12%)
Query: 158 LGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFG 217
+GL + P N ++ A G+V +AR +FD E +VSWT ++ Y G + +A
Sbjct: 35 VGLERAQDP--NRLIVDLAAAGRVWDARKLFDGTPERDVVSWTALVSAYARRGMLRDARS 92
Query: 218 LCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLA------------------LSMHSLLLK 259
L + R ++V + L+ G A+ G + A L +++ +
Sbjct: 93 LFD---RSDARRNVVTWTALLSGYARAGLVDEAEVLFQRMPQRNVVSWNTMLEAYAVAGR 149
Query: 260 SG-----YNNEDPLD----NLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQL 310
+G ++ D N+L++M + G ++ AR +F + E+ V WT+M+ G A+
Sbjct: 150 AGDACALFDRMPVRDAGSWNILLAMLVRSGSVDKARELFGRMPERDVMAWTTMVDGVARS 209
Query: 311 GYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQ 370
G EA LF + + +V +S A + ++ ++E + L +R +
Sbjct: 210 GNVDEARLLFDSMPERNV----------VSWNAMISGYTRNHRLDEALDLFTKMPHRDIA 259
Query: 371 TS--LIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVE 428
+ +I F + + +A+++F+ +P++++ W+ M+NGY + +L LF M +
Sbjct: 260 SCNIMITGFIQNKDLKRARKLFDEMPERNVVTWTTMMNGYLKGKQSELSLGLFRGML-MS 318
Query: 429 GLKPDAVVYTSILSACSHSGMVDDGLSFFKSM-QSNFGIEPSIEHYLCLVDLLGRAGRFD 487
G++P+ V + L ACS + +G + + ++ F ++ + L+++ + G
Sbjct: 319 GIRPNQVTFLGALDACSDLATLCEGKQVHQMICKTAFQVDTFVGS--ALMNVYAKCGEVG 376
Query: 488 LALKTIHEMPVEVQAQVWAPLLSACMKHHNV 518
LA K + ++ E W +++A HH V
Sbjct: 377 LARK-LFDLSREKDLISWNGIIAA-YAHHGV 405
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 119/225 (52%), Gaps = 10/225 (4%)
Query: 12 EETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGL 71
E +L + ML +G+ N TF L AC+++ ++ +GK+VH + K FQ D FV + L
Sbjct: 306 ELSLGLFRGMLMSGIRPNQVTFLGALDACSDLATLCEGKQVHQMICKTAFQVDTFVGSAL 365
Query: 72 IDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLEL 131
+++Y+KC + +RK+ D R + ++SWN II+A++ + EAI + ++M G
Sbjct: 366 MNVYAKCGEVGLARKLFD--LSREKDLISWNGIIAAYAHHGVGIEAIHLYEKMQGNGYRP 423
Query: 132 SASTFVSVVSGCSFRQGISMHCCVYKLGLLNNEIPLANS----VMSMYAKFGKVNEARSI 187
+ T+V ++S CS + +++ + + I + + ++ + ++ G++++A+ +
Sbjct: 424 NDVTYVVLLSACSHSGLVDEGLKIFESMVNDRSIAVRDEHYTCLIDLCSRAGRLDDAKRL 483
Query: 188 --FDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPD 230
+ +I S W+ ++GG G NE+ G + PD
Sbjct: 484 IHYLKIKPASGSVWSALLGGCNAHG--NESIGNLAARNLIQAEPD 526
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 79/158 (50%), Gaps = 11/158 (6%)
Query: 362 GLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLF 421
GLE Q LI + GR+ A+++F+ P++D+ W+A+++ YA GM A +LF
Sbjct: 36 GLE-RAQDPNRLIVDLAAAGRVWDARKLFDGTPERDVVSWTALVSAYARRGMLRDARSLF 94
Query: 422 YKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLG 481
+ + + V +T++LS + +G+VD+ F+ M + ++ + +++
Sbjct: 95 DR----SDARRNVVTWTALLSGYARAGLVDEAEVLFQRMP-----QRNVVSWNTMLEAYA 145
Query: 482 RAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVE 519
AGR A MPV A W LL+ ++ +V+
Sbjct: 146 VAGRAGDACALFDRMPVR-DAGSWNILLAMLVRSGSVD 182
>gi|297722071|ref|NP_001173399.1| Os03g0317100 [Oryza sativa Japonica Group]
gi|255674461|dbj|BAH92127.1| Os03g0317100 [Oryza sativa Japonica Group]
Length = 706
Score = 323 bits (828), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 193/602 (32%), Positives = 314/602 (52%), Gaps = 63/602 (10%)
Query: 76 SKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEM----------W 125
++ + +R + MP LR+ S+N++++ + R L D A+ + + M
Sbjct: 28 ARAGNIEGARAAFEAMP--LRTTASYNALLAGYFRNRLPDAALGLFRRMPSRDLASYNAL 85
Query: 126 VLGLELSASTFV-------------SVVSGCSFRQGISMHCCVYKLGLLNNEIPLANSV- 171
+ GL L T SVVS S +G H + L ++P N V
Sbjct: 86 ISGLSLRRQTLPDAAAALASIPFPPSVVSFTSLLRGYVRHGLLADAIRLFQQMPERNHVS 145
Query: 172 ----MSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSV 227
+ G+VNEAR +FDE+ + +V+WT ++ GY G + EA L ++M + +V
Sbjct: 146 YTVLLGGLLDAGRVNEARRLFDEMPDRDVVAWTAMLSGYCQAGRITEARALFDEMPKRNV 205
Query: 228 TPDLVVFLNLILGCAQVGNLFLALSMHSLL---------------LKSGYNN-------- 264
V + +I G AQ G + LA + ++ +++G+
Sbjct: 206 ----VSWTAMISGYAQNGEVNLARKLFEVMPERNEVSWTAMLVGYIQAGHVEDAAELFNA 261
Query: 265 --EDPLD--NLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLF 320
E P+ N ++ + + G ++ A+ VF+ + E+ W++MI Y Q + EA++ F
Sbjct: 262 MPEHPVAACNAMMVGFGQRGMVDAAKTVFEKMCERDDGTWSAMIKAYEQNEFLMEALSTF 321
Query: 321 KRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKC 380
+ +L VRPN ++ + L+ CA L L G+E+ ++ + + ++LI M+ KC
Sbjct: 322 REMLWRGVRPNYPSVISILTVCAALAVLDYGREVHAAMLRCSFDMDVFAVSALITMYIKC 381
Query: 381 GRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSI 440
G ++KAK VF KD+ +W++MI GYA HG+G+QAL +F+ M+ + G+ PD + Y
Sbjct: 382 GNLDKAKRVFHTFEPKDIVMWNSMITGYAQHGLGEQALGIFHDMR-LAGMSPDGITYIGA 440
Query: 441 LSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEV 500
L+ACS++G V +G F SM N I P EHY C+VDLLGR+G + A I MPVE
Sbjct: 441 LTACSYTGKVKEGREIFNSMTVNSSIRPGAEHYSCMVDLLGRSGLVEEAFDLIKNMPVEP 500
Query: 501 QAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARG 560
A +W L+ AC H N E+ E+AAK LL L PG+ G Y+L+++++TS G W++A+ R
Sbjct: 501 DAVIWGALMGACRMHRNAEIAEFAAKKLLELEPGNAGPYVLLSHIYTSVGRWEDASKMRK 560
Query: 561 LMDDRRLTKEPGWSQVEIDGSVQVFVAGD-RSHHLSVDIRKTLKELHIKLLEAGYIAEAD 619
+ R L K PG S +E D V +F +GD +H I + L++L L+E+GY A+
Sbjct: 561 FISSRNLNKSPGCSWIEYDKRVHLFTSGDVLAHPEHAAILRILEKLDGLLMESGYSADGS 620
Query: 620 IV 621
V
Sbjct: 621 FV 622
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 89/413 (21%), Positives = 197/413 (47%), Gaps = 17/413 (4%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
++R +G + + + M + N ++ ++L + + + +R+ +
Sbjct: 118 LLRGYVRHGLLADAIRLFQQMPER----NHVSYTVLLGGLLDAGRVNEARRLFDEMP--- 170
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+D T ++ Y + +R + DEMP R +VVSW ++IS +++ N E L
Sbjct: 171 -DRDVVAWTAMLSGYCQAGRITEARALFDEMPKR--NVVSWTAMISGYAQ---NGEVNLA 224
Query: 121 LKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGK 180
K V+ E + ++ +++ G + G + + + N++M + + G
Sbjct: 225 RKLFEVMP-ERNEVSWTAMLVG-YIQAGHVEDAAELFNAMPEHPVAACNAMMVGFGQRGM 282
Query: 181 VNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILG 240
V+ A+++F+++ E +W+ +I Y + EA +M V P+ ++++
Sbjct: 283 VDAAKTVFEKMCERDDGTWSAMIKAYEQNEFLMEALSTFREMLWRGVRPNYPSVISILTV 342
Query: 241 CAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLW 300
CA + L +H+ +L+ ++ + + L++MY KCG+L+ A+RVF K + +W
Sbjct: 343 CAALAVLDYGREVHAAMLRCSFDMDVFAVSALITMYIKCGNLDKAKRVFHTFEPKDIVMW 402
Query: 301 TSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVL 360
SMI GYAQ G +A+ +F + + P+ T L+AC+ G + +G+EI + +
Sbjct: 403 NSMITGYAQHGLGEQALGIFHDMRLAGMSPDGITYIGALTACSYTGKVKEGREIFNSMTV 462
Query: 361 N-GLESNRQVQTSLIHMFSKCGRINKAKEVFERVP-DKDLAVWSAMINGYAIH 411
N + + + ++ + + G + +A ++ + +P + D +W A++ +H
Sbjct: 463 NSSIRPGAEHYSCMVDLLGRSGLVEEAFDLIKNMPVEPDAVIWGALMGACRMH 515
Score = 88.6 bits (218), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 97/415 (23%), Positives = 178/415 (42%), Gaps = 76/415 (18%)
Query: 169 NSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQM------ 222
N+ ++ A+ G + AR+ F+ + + S+ ++ GY + A GL +M
Sbjct: 21 NARIAHLARAGNIEGARAAFEAMPLRTTASYNALLAGYFRNRLPDAALGLFRRMPSRDLA 80
Query: 223 -----------RRMSV------------TPDLVVFLNLILGCAQVGNLFLALSMHSL--- 256
RR ++ P +V F +L+ G + G L A+ +
Sbjct: 81 SYNALISGLSLRRQTLPDAAAALASIPFPPSVVSFTSLLRGYVRHGLLADAIRLFQQMPE 140
Query: 257 ------------LLKSGYNNE-----DPLDN-------LLVSMYTKCGDLELARRVFDAV 292
LL +G NE D + + ++S Y + G + AR +FD +
Sbjct: 141 RNHVSYTVLLGGLLDAGRVNEARRLFDEMPDRDVVAWTAMLSGYCQAGRITEARALFDEM 200
Query: 293 LEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGK 352
+++V WT+MI GYAQ G VNL ++L + NE + L + G +
Sbjct: 201 PKRNVVSWTAMISGYAQNG----EVNLARKLFEVMPERNEVSWTAMLVGYIQAGHVEDAA 256
Query: 353 EIEEYIVLNGL-ESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIH 411
E+ N + E +++ F + G ++ AK VFE++ ++D WSAMI Y +
Sbjct: 257 EL-----FNAMPEHPVAACNAMMVGFGQRGMVDAAKTVFEKMCERDDGTWSAMIKAYEQN 311
Query: 412 GMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSM-QSNFGIEPSI 470
+AL+ F +M G++P+ SIL+ C+ ++D G +M + +F ++ +
Sbjct: 312 EFLMEALSTFREMLW-RGVRPNYPSVISILTVCAALAVLDYGREVHAAMLRCSFDMD--V 368
Query: 471 EHYLCLVDLLGRAGRFDLALKTIHEM-PVEVQAQVWAPLLSACMKHHNVELGEYA 524
L+ + + G D A + H P ++ +W +++ +H LGE A
Sbjct: 369 FAVSALITMYIKCGNLDKAKRVFHTFEPKDI--VMWNSMITGYAQH---GLGEQA 418
>gi|224124974|ref|XP_002319471.1| predicted protein [Populus trichocarpa]
gi|222857847|gb|EEE95394.1| predicted protein [Populus trichocarpa]
Length = 703
Score = 323 bits (828), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 198/568 (34%), Positives = 302/568 (53%), Gaps = 31/568 (5%)
Query: 62 QQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVL 121
+++ GL+ Y K +RKV D+MP R +VVSW S++ + + L DEA L+
Sbjct: 75 ERNTISWNGLVSGYVKNGMISEARKVFDKMPER--NVVSWTSMVRGYVQEGLIDEAELLF 132
Query: 122 KEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGLLNNEIPLANSVMSM-----YA 176
M +VVS G+ V + L + IP+ + V S
Sbjct: 133 WRM----------PEKNVVSWTVMLGGLIEDGRVDEARRLFDMIPVKDVVASTNMIGGLC 182
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDL--VVF 234
G+++EAR IFDE+ + ++V+WT++I GY V+ A L V PD V +
Sbjct: 183 SEGRLSEAREIFDEMPQRNVVAWTSMISGYAMNNKVDVARKL------FEVMPDKNEVTW 236
Query: 235 LNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLE 294
++ G + G + A L K+ N ++ + G++ AR VFD + E
Sbjct: 237 TAMLKGYTRSGRINEAAE----LFKAMPVKPVAACNGMIMGFGLNGEVGKARWVFDQMKE 292
Query: 295 KSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEI 354
K W+++I Y + G+ EA+ LF + + VRPN ++ + LS C L SL G+++
Sbjct: 293 KDDGTWSALIKIYERKGFELEALALFSLMQREGVRPNFPSIISILSVCGSLASLDHGRQV 352
Query: 355 EEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMG 414
+V + + + V + LI M+ KCG + K VF+R KD+ +W+++I GYA HG G
Sbjct: 353 HSQLVRSHFDLDIYVSSVLITMYIKCGDLVTGKRVFDRFSSKDIVMWNSIIAGYAQHGFG 412
Query: 415 DQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYL 474
++AL +F++M G PD + + +LSAC ++G V +GL F+SM+S + ++ EHY
Sbjct: 413 EKALEVFHEM-FSSGAAPDEITFIGVLSACGYTGKVKEGLEIFESMKSKYQVDQKTEHYA 471
Query: 475 CLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPG 534
C+VDLLGRAG+ + A+ I MPVE A VW LLSAC H N++L E AAK LL L P
Sbjct: 472 CMVDLLGRAGKLNEAMNLIENMPVEADAIVWGALLSACRTHKNLDLAEIAAKKLLQLEPS 531
Query: 535 STGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHL 594
S G YIL++NL+ S WK+ A R M R ++K PG S +E+D V +F G + H
Sbjct: 532 SAGPYILLSNLYASQSRWKDVAELRKTMRARNVSKSPGCSWIEVDNKVHMFTGGGSASHP 591
Query: 595 SVD-IRKTLKELHIKLLEAGYIAEADIV 621
+ I K L++L L EAGY + V
Sbjct: 592 EHEMIMKKLEKLGASLREAGYCPDGSFV 619
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/292 (27%), Positives = 141/292 (48%), Gaps = 58/292 (19%)
Query: 172 MSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQM-RRMSVTPD 230
+S +A+ G+++ AR+IFD++ ++ SW I+ GY + EA L ++M R +++
Sbjct: 23 ISYFARLGQIDRARNIFDDLQSKTVTSWNAIVAGYFHNKRPAEAQKLFDKMPERNTISW- 81
Query: 231 LVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFD 290
N LVS Y K G + AR+VFD
Sbjct: 82 ---------------------------------------NGLVSGYVKNGMISEARKVFD 102
Query: 291 AVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSK 350
+ E++V WTSM+ GY Q G EA LF R+ + +V + L E G + +
Sbjct: 103 KMPERNVVSWTSMVRGYVQEGLIDEAELLFWRMPEKNV----VSWTVMLGGLIEDGRVDE 158
Query: 351 GKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAI 410
+ + + I + + ++ T++I GR+++A+E+F+ +P +++ W++MI+GYA+
Sbjct: 159 ARRLFDMIPVKDVVAS----TNMIGGLCSEGRLSEAREIFDEMPQRNVVAWTSMISGYAM 214
Query: 411 HGMGDQALNLFYKMQHVEGLKPDA--VVYTSILSACSHSGMVDDGLSFFKSM 460
+ D A LF M PD V +T++L + SG +++ FK+M
Sbjct: 215 NNKVDVARKLFEVM-------PDKNEVTWTAMLKGYTRSGRINEAAELFKAM 259
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 82/312 (26%), Positives = 146/312 (46%), Gaps = 40/312 (12%)
Query: 169 NSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVT 228
N++++ Y + EA+ +FD++ E + +SW ++ GYV G ++EA + ++M +V
Sbjct: 51 NAIVAGYFHNKRPAEAQKLFDKMPERNTISWNGLVSGYVKNGMISEARKVFDKMPERNV- 109
Query: 229 PDLVVFLNLILGCAQVG---------------NLFLALSMHSLLLKSGYNNED------- 266
V + +++ G Q G N+ M L++ G +E
Sbjct: 110 ---VSWTSMVRGYVQEGLIDEAELLFWRMPEKNVVSWTVMLGGLIEDGRVDEARRLFDMI 166
Query: 267 PLDNLLVSM-----YTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFK 321
P+ +++ S G L AR +FD + +++V WTSMI GYA + V++ +
Sbjct: 167 PVKDVVASTNMIGGLCSEGRLSEAREIFDEMPQRNVVAWTSMISGYAM----NNKVDVAR 222
Query: 322 RLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCG 381
+L + NE T L G +++ E+ + + + + + +I F G
Sbjct: 223 KLFEVMPDKNEVTWTAMLKGYTRSGRINEAAELFKAMPVKPVAAC----NGMIMGFGLNG 278
Query: 382 RINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSIL 441
+ KA+ VF+++ +KD WSA+I Y G +AL LF MQ EG++P+ SIL
Sbjct: 279 EVGKARWVFDQMKEKDDGTWSALIKIYERKGFELEALALFSLMQR-EGVRPNFPSIISIL 337
Query: 442 SACSHSGMVDDG 453
S C +D G
Sbjct: 338 SVCGSLASLDHG 349
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 75/282 (26%), Positives = 124/282 (43%), Gaps = 36/282 (12%)
Query: 13 ETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLI 72
E L+ +S M + GV N + +L C ++ S+ G++VHS +++ F D +V + LI
Sbjct: 313 EALALFSLMQREGVRPNFPSIISILSVCGSLASLDHGRQVHSQLVRSHFDLDIYVSSVLI 372
Query: 73 DMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELS 132
MY KC D V+ ++V D + +V WNSII+ +++ ++A+ V EM+ G
Sbjct: 373 TMYIKCGDLVTGKRVFDRFSS--KDIVMWNSIIAGYAQHGFGEKALEVFHEMFSSGAAPD 430
Query: 133 ASTFVSVVSGCSFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIG 192
TF+ V+S C + G + + + S+ S Y K + D +G
Sbjct: 431 EITFIGVLSACGY------------TGKVKEGLEIFESMKSKYQVDQKTEHYACMVDLLG 478
Query: 193 ETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALS 252
G +NEA L + M V D +V+ L+ C NL LA
Sbjct: 479 RA---------------GKLNEAMNL---IENMPVEADAIVWGALLSACRTHKNLDLAEI 520
Query: 253 MHSLLLKSGYNNEDP---LDNLLVSMYTKCGDLELARRVFDA 291
LL+ ++ P L NL S ++ D+ R+ A
Sbjct: 521 AAKKLLQLEPSSAGPYILLSNLYASQ-SRWKDVAELRKTMRA 561
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/302 (21%), Positives = 131/302 (43%), Gaps = 61/302 (20%)
Query: 259 KSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVN 318
+S +++ + +S + + G ++ AR +FD + K+V W +++ GY P+EA
Sbjct: 9 RSYFSSSAAITQCQISYFARLGQIDRARNIFDDLQSKTVTSWNAIVAGYFHNKRPAEAQK 68
Query: 319 LFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFS 378
LF ++ P T++ NGL S +
Sbjct: 69 LFDKM------PERNTIS-----------------------WNGLVSG----------YV 89
Query: 379 KCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYT 438
K G I++A++VF+++P++++ W++M+ GY G+ D+A LF++M + + V +T
Sbjct: 90 KNGMISEARKVFDKMPERNVVSWTSMVRGYVQEGLIDEAELLFWRMP-----EKNVVSWT 144
Query: 439 SILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLG---RAGRFDLALKTIHE 495
+L G VD+ F + ++ + +++G GR A + E
Sbjct: 145 VMLGGLIEDGRVDEARRLFDMI--------PVKDVVASTNMIGGLCSEGRLSEAREIFDE 196
Query: 496 MPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTG-NYILMANLFTSAGMWKE 554
MP + W ++S ++ V++ A+ L + P + M +T +G E
Sbjct: 197 MP-QRNVVAWTSMISGYAMNNKVDV----ARKLFEVMPDKNEVTWTAMLKGYTRSGRINE 251
Query: 555 AA 556
AA
Sbjct: 252 AA 253
>gi|449433319|ref|XP_004134445.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g14850-like [Cucumis sativus]
Length = 606
Score = 323 bits (828), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 181/590 (30%), Positives = 311/590 (52%), Gaps = 9/590 (1%)
Query: 36 VLKACANINSIWDGKRVHSHVLK-VGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVR 94
V++ ++ S G+ H+ +LK + AF+ L++MY+K S++ +L+ P R
Sbjct: 12 VVELAVSVRSSLLGRAAHAQILKTLKTPFPAFLYNHLVNMYAKLDHLNSAKLILELAPCR 71
Query: 95 LRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCSFRQ----GIS 150
SVV+W ++I+ + A+L +M + + TF V+ + + G
Sbjct: 72 --SVVTWTALIAGSVQNGCFVSALLHFSDMLSDCVRPNDFTFPCVLKASTGLRMDTTGKQ 129
Query: 151 MHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVG 210
+H K GL+N ++ + SV MY+K G +N+A +FDE+ ++ +W I V G
Sbjct: 130 LHALAVKEGLIN-DVFVGCSVFDMYSKLGFLNDAYKVFDEMPHRNLETWNAYISNSVLHG 188
Query: 211 NVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDN 270
++ ++ R+ PD + F + C+ L +H +++SGY + N
Sbjct: 189 RPEDSVIAFIELLRVGGKPDSITFCAFLNACSDKLGLGPGCQLHGFIIRSGYGQNVSVSN 248
Query: 271 LLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRP 330
L+ Y KCG++E + VFD + E++ W+S+I Y Q +A LF R K + P
Sbjct: 249 GLIDFYGKCGEVECSEMVFDRMGERNSVSWSSLIAAYVQNNEEEKASCLFLRARKEDIEP 308
Query: 331 NEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVF 390
+ +++ L ACA L + G+ ++ V +E N V ++L+ M+ KCG I+ A++ F
Sbjct: 309 TDFMVSSVLCACAGLSEIEFGRSVQALAVKACVEQNIFVASALVDMYGKCGSIDNAEQAF 368
Query: 391 ERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMV 450
+P+++L W+A++ GYA G ++A+ L +M G+ P V LSACS +G +
Sbjct: 369 NAMPERNLVSWNALLGGYAHQGHANKAVALLEEMTSAAGIVPSYVSLICALSACSRAGDL 428
Query: 451 DDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLS 510
G+ F+SM+ +G+EP EHY CLVDLLGRAG + A I MP +W LL
Sbjct: 429 KTGMKIFESMKERYGVEPGPEHYACLVDLLGRAGMVECAYDFIKRMPFPPTISIWGALLG 488
Query: 511 ACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKE 570
AC H ELG+ AA+ L L+P +GN+++++N+F + G W+E R M + + K
Sbjct: 489 ACRMHGKPELGKLAAEKLFELDPKDSGNHVVLSNMFAATGRWEEVTVVRNEMKEVGIKKG 548
Query: 571 PGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKELHIKLLE-AGYIAEAD 619
G+S + +D + +F A D+SH +I+ L +L ++ + AG IA+ +
Sbjct: 549 AGFSWITVDSRIHMFQAKDKSHEKDPEIQDILGKLRKEMQDAAGCIADPN 598
Score = 195 bits (495), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 119/419 (28%), Positives = 216/419 (51%), Gaps = 10/419 (2%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+I S NG F L +S ML V N FTFP VLKA + GK++H+ +K G
Sbjct: 79 LIAGSVQNGCFVSALLHFSDMLSDCVRPNDFTFPCVLKASTGLRMDTTGKQLHALAVKEG 138
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
D FV + DMYSK + KV DEMP R++ +WN+ IS +++++
Sbjct: 139 LINDVFVGCSVFDMYSKLGFLNDAYKVFDEMP--HRNLETWNAYISNSVLHGRPEDSVIA 196
Query: 121 LKEMWVLGLELSASTFVSVVSGCSFRQGI----SMHCCVYKLGLLNNEIPLANSVMSMYA 176
E+ +G + + TF + ++ CS + G+ +H + + G N + ++N ++ Y
Sbjct: 197 FIELLRVGGKPDSITFCAFLNACSDKLGLGPGCQLHGFIIRSGYGQN-VSVSNGLIDFYG 255
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K G+V + +FD +GE + VSW+++I YV +A L + R+ + P + +
Sbjct: 256 KCGEVECSEMVFDRMGERNSVSWSSLIAAYVQNNEEEKASCLFLRARKEDIEPTDFMVSS 315
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
++ CA + + S+ +L +K+ + + LV MY KCG ++ A + F+A+ E++
Sbjct: 316 VLCACAGLSEIEFGRSVQALAVKACVEQNIFVASALVDMYGKCGSIDNAEQAFNAMPERN 375
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTS-VRPNEATLATTLSACAELGSLSKGKEIE 355
+ W +++GGYA G+ ++AV L + + + + P+ +L LSAC+ G L G +I
Sbjct: 376 LVSWNALLGGYAHQGHANKAVALLEEMTSAAGIVPSYVSLICALSACSRAGDLKTGMKIF 435
Query: 356 EYIVLN-GLESNRQVQTSLIHMFSKCGRINKAKEVFERVP-DKDLAVWSAMINGYAIHG 412
E + G+E + L+ + + G + A + +R+P +++W A++ +HG
Sbjct: 436 ESMKERYGVEPGPEHYACLVDLLGRAGMVECAYDFIKRMPFPPTISIWGALLGACRMHG 494
>gi|449497589|ref|XP_004160443.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Cucumis sativus]
Length = 776
Score = 323 bits (828), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 198/640 (30%), Positives = 322/640 (50%), Gaps = 81/640 (12%)
Query: 40 CANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVV 99
C + S+++G R S V +I Y + F +RKV ++MP R ++
Sbjct: 76 CESALSVFNGMRRRSTV----------TYNAMISGYLSNNKFDCARKVFEKMPDR--DLI 123
Query: 100 SWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLG 159
SWN ++S + + A + +M E ++ +++SG + + ++
Sbjct: 124 SWNVMLSGYVKNGNLSAARALFNQM----PEKDVVSWNAMLSGFAQNGFVEEARKIFDQM 179
Query: 160 LLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLC 219
L+ NEI N ++S Y + G++ +AR +FD + IVSW ++GGYV +++A L
Sbjct: 180 LVKNEISW-NGLLSAYVQNGRIEDARRLFDSKMDWEIVSWNCLMGGYVRKKRLDDARSLF 238
Query: 220 NQMRRMSVTPDLVVFLNLILGCAQVG------NLFLALSMHSLL----LKSGYNNEDPLD 269
++M D + + +I G AQ G LF L + + + SG+ LD
Sbjct: 239 DRM----PVRDKISWNIMITGYAQNGLLSEARRLFEELPIRDVFAWTAMVSGFVQNGMLD 294
Query: 270 ------------------------------------------------NLLVSMYTKCGD 281
N +V+ Y +CG+
Sbjct: 295 EATRIFEEMPEKNEVSWNAMIAGYVQSQQIEKARELFDQMPSRNTSSWNTMVTGYAQCGN 354
Query: 282 LELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSA 341
++ A+ +FD + ++ W +MI GYAQ G EA++LF ++ + N + LA LS+
Sbjct: 355 IDQAKILFDEMPQRDCISWAAMISGYAQSGQSEEALHLFIKMKRDGGILNRSALACALSS 414
Query: 342 CAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVW 401
CAE+ +L GK++ +V G ++ +L+ M+ KCG I +A +VFE + +KD+ W
Sbjct: 415 CAEIAALELGKQLHGRLVKAGFQTGYIAGNALLAMYGKCGSIEEAFDVFEDITEKDIVSW 474
Query: 402 SAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQ 461
+ MI GYA HG G +AL LF M+ +KPD V +LSACSH+G+VD G+ +F SM
Sbjct: 475 NTMIAGYARHGFGKEALALFESMKMT--IKPDDVTLVGVLSACSHTGLVDKGMEYFNSMY 532
Query: 462 SNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELG 521
N+GI + +HY C++DLLGRAGR D AL + MP A W LL A H + ELG
Sbjct: 533 QNYGITANAKHYTCMIDLLGRAGRLDEALNLMKSMPFYPDAATWGALLGASRIHGDTELG 592
Query: 522 EYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGS 581
E AA+ + + P ++G Y+L++NL+ ++G W+E R M D+ + K PG+S VEI
Sbjct: 593 EKAAEKVFEMEPDNSGMYVLLSNLYAASGRWREVREMRSKMRDKGVKKVPGYSWVEIQNK 652
Query: 582 VQVFVAGDRSHHLSVDIRKTLKELHIKLLEAGYIAEADIV 621
+F GD SH + I L+EL ++L + G+++ +V
Sbjct: 653 THIFTVGDCSHPEAERIYAYLEELDLELKKDGFVSSTKLV 692
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 102/445 (22%), Positives = 202/445 (45%), Gaps = 47/445 (10%)
Query: 98 VVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYK 157
+V WN ISA+ R + A+ V M S T+ +++SG V++
Sbjct: 60 IVKWNRKISAYMRKGQCESALSVFNGM----RRRSTVTYNAMISGYLSNNKFDCARKVFE 115
Query: 158 LGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFG 217
+ + ++ N ++S Y K G ++ AR++F+++ E +VSW ++ G+ G V EA
Sbjct: 116 -KMPDRDLISWNVMLSGYVKNGNLSAARALFNQMPEKDVVSWNAMLSGFAQNGFVEEARK 174
Query: 218 LCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSL----------LLKSGYNNEDP 267
+ +QM + + + + L+ Q G + A + L GY +
Sbjct: 175 IFDQM----LVKNEISWNGLLSAYVQNGRIEDARRLFDSKMDWEIVSWNCLMGGYVRKKR 230
Query: 268 LD-----------------NLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQL 310
LD N++++ Y + G L ARR+F+ + + VF WT+M+ G+ Q
Sbjct: 231 LDDARSLFDRMPVRDKISWNIMITGYAQNGLLSEARRLFEELPIRDVFAWTAMVSGFVQN 290
Query: 311 GYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQ 370
G EA +F+ + + NE + ++ + + K +E+ + + N
Sbjct: 291 GMLDEATRIFEEMPE----KNEVSWNAMIAGYVQSQQIEKARELFDQMP----SRNTSSW 342
Query: 371 TSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGL 430
+++ +++CG I++AK +F+ +P +D W+AMI+GYA G ++AL+LF KM+ G+
Sbjct: 343 NTMVTGYAQCGNIDQAKILFDEMPQRDCISWAAMISGYAQSGQSEEALHLFIKMKRDGGI 402
Query: 431 KPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLAL 490
+ + + LS+C+ ++ G + G + L+ + G+ G + A
Sbjct: 403 LNRSALACA-LSSCAEIAALELGKQLHGRL-VKAGFQTGYIAGNALLAMYGKCGSIEEAF 460
Query: 491 KTIHEMPVEVQAQVWAPLLSACMKH 515
++ E W +++ +H
Sbjct: 461 DVFEDI-TEKDIVSWNTMIAGYARH 484
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 90/365 (24%), Positives = 165/365 (45%), Gaps = 75/365 (20%)
Query: 160 LLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTII---------------- 203
+++++I N +S Y + G+ A S+F+ + S V++ +I
Sbjct: 55 IVDSDIVKWNRKISAYMRKGQCESALSVFNGMRRRSTVTYNAMISGYLSNNKFDCARKVF 114
Query: 204 ---------------GGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLF 248
GYV GN++ A L NQM D+V + ++ G AQ G +
Sbjct: 115 EKMPDRDLISWNVMLSGYVKNGNLSAARALFNQM----PEKDVVSWNAMLSGFAQNGFVE 170
Query: 249 LALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYA 308
A + +L NE + LL S Y + G +E ARR+FD+ ++ + W ++GGY
Sbjct: 171 EARKIFDQML---VKNEISWNGLL-SAYVQNGRIEDARRLFDSKMDWEIVSWNCLMGGYV 226
Query: 309 QLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYI---------- 358
+ +A +LF R+ VR ++ + ++ A+ G LS+ + + E +
Sbjct: 227 RKKRLDDARSLFDRM---PVR-DKISWNIMITGYAQNGLLSEARRLFEELPIRDVFAWTA 282
Query: 359 -----VLNGL------------ESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVW 401
V NG+ E N ++I + + +I KA+E+F+++P ++ + W
Sbjct: 283 MVSGFVQNGMLDEATRIFEEMPEKNEVSWNAMIAGYVQSQQIEKARELFDQMPSRNTSSW 342
Query: 402 SAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQ 461
+ M+ GYA G DQA LF +M + D + + +++S + SG ++ L F M+
Sbjct: 343 NTMVTGYAQCGNIDQAKILFDEMP-----QRDCISWAAMISGYAQSGQSEEALHLFIKMK 397
Query: 462 SNFGI 466
+ GI
Sbjct: 398 RDGGI 402
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 74/282 (26%), Positives = 135/282 (47%), Gaps = 29/282 (10%)
Query: 183 EARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMS-VTPDLVV---FLNLI 238
E+++ I ++ IV W I Y+ G A + N MRR S VT + ++ N
Sbjct: 47 ESKNSDSTIVDSDIVKWNRKISAYMRKGQCESALSVFNGMRRRSTVTYNAMISGYLSNNK 106
Query: 239 LGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVF 298
CA+ +F + L+ N+++S Y K G+L AR +F+ + EK V
Sbjct: 107 FDCAR--KVFEKMPDRDLISW----------NVMLSGYVKNGNLSAARALFNQMPEKDVV 154
Query: 299 LWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYI 358
W +M+ G+AQ G+ EA +F ++L NE + LSA + G + + + +
Sbjct: 155 SWNAMLSGFAQNGFVEEARKIFDQMLV----KNEISWNGLLSAYVQNGRIEDARRLFD-- 208
Query: 359 VLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQAL 418
+ ++ L+ + + R++ A+ +F+R+P +D W+ MI GYA +G+ +A
Sbjct: 209 --SKMDWEIVSWNCLMGGYVRKKRLDDARSLFDRMPVRDKISWNIMITGYAQNGLLSEAR 266
Query: 419 NLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSM 460
LF ++ D +T+++S +GM+D+ F+ M
Sbjct: 267 RLFEELP-----IRDVFAWTAMVSGFVQNGMLDEATRIFEEM 303
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 105/244 (43%), Gaps = 34/244 (13%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI +G EE L + M + G N L +CA I ++ GK++H ++K G
Sbjct: 376 MISGYAQSGQSEEALHLFIKMKRDGGILNRSALACALSSCAEIAALELGKQLHGRLVKAG 435
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
FQ L+ MY KC + V ++ + + +VSWN++I+ ++R EA+ +
Sbjct: 436 FQTGYIAGNALLAMYGKCGSIEEAFDVFED--ITEKDIVSWNTMIAGYARHGFGKEALAL 493
Query: 121 LKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGK 180
+ M + ++ T V V+S CS GL++ + N SMY +G
Sbjct: 494 FESM-KMTIKPDDVTLVGVLSACS------------HTGLVDKGMEYFN---SMYQNYGI 537
Query: 181 VNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILG 240
A+ +T +I G ++EA L M+ M PD + +LG
Sbjct: 538 TANAK------------HYTCMIDLLGRAGRLDEALNL---MKSMPFYPDAATW-GALLG 581
Query: 241 CAQV 244
+++
Sbjct: 582 ASRI 585
>gi|449459160|ref|XP_004147314.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Cucumis sativus]
Length = 695
Score = 323 bits (828), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 190/597 (31%), Positives = 305/597 (51%), Gaps = 47/597 (7%)
Query: 29 NSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVL 88
+SF +L A + D + + +LK +D F L+ Y+K + +
Sbjct: 57 DSFLHNQLLHLYAKFGKLRDAQNLFDKMLK----RDIFSWNALLSAYAKSGSIQNLKATF 112
Query: 89 DEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCS---- 144
D MP R VS+N+ I+ S E++ + K M G E + T VS+++ +
Sbjct: 113 DRMP--FRDSVSYNTTIAGFSGNSCPQESLELFKRMQREGFEPTEYTIVSILNASAQLSD 170
Query: 145 FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIG 204
R G +H + L N + + N++ MYAK G++ +AR +FD + + ++VSW +I
Sbjct: 171 LRYGKQIHGSIIVRNFLGN-VFIWNALTDMYAKCGEIEQARWLFDCLTKKNLVSWNLMIS 229
Query: 205 GYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNN 264
GY G + GL +QMR PD V
Sbjct: 230 GYAKNGQPEKCIGLLHQMRLSGHMPDQVTM------------------------------ 259
Query: 265 EDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLL 324
+ +++ Y +CG ++ ARRVF EK + WT+M+ GYA+ G +A+ LF +L
Sbjct: 260 -----STIIAAYCQCGRVDEARRVFSEFKEKDIVCWTAMMVGYAKNGREEDALLLFNEML 314
Query: 325 KTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRIN 384
+ P+ TL++ +S+CA+L SL G+ + +L GL +N V ++LI M+SKCG I+
Sbjct: 315 LEHIEPDSYTLSSVVSSCAKLASLHHGQAVHGKSILAGLNNNLLVSSALIDMYSKCGFID 374
Query: 385 KAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSAC 444
A+ VF +P +++ W+AMI G A +G AL LF M + KPD V + ILSAC
Sbjct: 375 DARSVFNLMPTRNVVSWNAMIVGCAQNGHDKDALELFENMLQ-QKFKPDNVTFIGILSAC 433
Query: 445 SHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQV 504
H ++ G +F S+ + G+ P+++HY C+V+LLGR GR + A+ I M + +
Sbjct: 434 LHCNWIEQGQEYFDSITNQHGMTPTLDHYACMVNLLGRTGRIEQAVALIKNMAHDPDFLI 493
Query: 505 WAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDD 564
W+ LLS C ++ E AA++L L+P YI+++N++ S G WK+ A+ R LM
Sbjct: 494 WSTLLSICSTKGDIVNAEVAARHLFELDPTIAVPYIMLSNMYASMGRWKDVASVRNLMKS 553
Query: 565 RRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKELHIKLLEAGYIAEADIV 621
+ + K G+S +EID V F + DR+H S DI + L L KL E G+ ++V
Sbjct: 554 KNVKKFAGFSWIEIDNEVHRFTSEDRTHPESEDIYEKLNMLIGKLQEEGFTPNTNLV 610
Score = 170 bits (430), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 110/439 (25%), Positives = 209/439 (47%), Gaps = 39/439 (8%)
Query: 6 TNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDA 65
+ N +E+L + M + G +T +L A A ++ + GK++H ++ F +
Sbjct: 131 SGNSCPQESLELFKRMQREGFEPTEYTIVSILNASAQLSDLRYGKQIHGSIIVRNFLGNV 190
Query: 66 FVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMW 125
F+ L DMY+KC + +R + D + +++VSWN +IS +++ ++ I +L +M
Sbjct: 191 FIWNALTDMYAKCGEIEQARWLFDCLTK--KNLVSWNLMISGYAKNGQPEKCIGLLHQMR 248
Query: 126 VLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEAR 185
+ G T ++++ Y + G+V+EAR
Sbjct: 249 LSGHMPDQVTMSTIIAA--------------------------------YCQCGRVDEAR 276
Query: 186 SIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVG 245
+F E E IV WT ++ GY G +A L N+M + PD +++ CA++
Sbjct: 277 RVFSEFKEKDIVCWTAMMVGYAKNGREEDALLLFNEMLLEHIEPDSYTLSSVVSSCAKLA 336
Query: 246 NLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIG 305
+L ++H + +G NN + + L+ MY+KCG ++ AR VF+ + ++V W +MI
Sbjct: 337 SLHHGQAVHGKSILAGLNNNLLVSSALIDMYSKCGFIDDARSVFNLMPTRNVVSWNAMIV 396
Query: 306 GYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIV-LNGLE 364
G AQ G+ +A+ LF+ +L+ +P+ T LSAC + +G+E + I +G+
Sbjct: 397 GCAQNGHDKDALELFENMLQQKFKPDNVTFIGILSACLHCNWIEQGQEYFDSITNQHGMT 456
Query: 365 SNRQVQTSLIHMFSKCGRINKAKEVFERVP-DKDLAVWSAMINGYAIHGMGDQALNLFYK 423
++++ + GRI +A + + + D D +WS +++ + G +N
Sbjct: 457 PTLDHYACMVNLLGRTGRIEQAVALIKNMAHDPDFLIWSTLLSICSTKG---DIVNAEVA 513
Query: 424 MQHVEGLKPDAVVYTSILS 442
+H+ L P V +LS
Sbjct: 514 ARHLFELDPTIAVPYIMLS 532
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/247 (23%), Positives = 112/247 (45%), Gaps = 32/247 (12%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
M+ NG E+ L ++ ML + +S+T V+ +CA + S+ G+ VH + G
Sbjct: 293 MMVGYAKNGREEDALLLFNEMLLEHIEPDSYTLSSVVSSCAKLASLHHGQAVHGKSILAG 352
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+ V + LIDMYSKC +R V + MP R+VVSWN++I ++ + +A+ +
Sbjct: 353 LNNNLLVSSALIDMYSKCGFIDDARSVFNLMPT--RNVVSWNAMIVGCAQNGHDKDALEL 410
Query: 121 LKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGK 180
+ M + TF+ ++S C +HC + G +S+ + +
Sbjct: 411 FENMLQQKFKPDNVTFIGILSAC-------LHCNWIEQGQ-----EYFDSITNQHGMTPT 458
Query: 181 VNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILG 240
++ + + +G T G + +A L ++ M+ PD +++ L+
Sbjct: 459 LDHYACMVNLLGRT---------------GRIEQAVAL---IKNMAHDPDFLIWSTLLSI 500
Query: 241 CAQVGNL 247
C+ G++
Sbjct: 501 CSTKGDI 507
>gi|147840590|emb|CAN72716.1| hypothetical protein VITISV_032470 [Vitis vinifera]
Length = 694
Score = 323 bits (828), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 172/496 (34%), Positives = 277/496 (55%), Gaps = 20/496 (4%)
Query: 137 VSVVSGCS-FRQGISMHCCVYKLGLLNNEIPLANSVM---SMYAKFGKVNEARSIFDEIG 192
+S++ CS +Q +H + + GL + P + S + + + F ++ A+ +FD+I
Sbjct: 39 LSLIDQCSETKQLKQIHAQMLRTGLFFD--PFSASRLITAAALSPFPSLDYAQQVFDQIP 96
Query: 193 ETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVT-PDLVVFLNLILGCAQVGNLFLAL 251
++ +W T+I Y + N +++ + +M S PD F LI +++ LF
Sbjct: 97 HPNLYTWNTLIRAYASSSNPHQSLLIFLRMLHQSPDFPDKFTFPFLIKAASELEELFTGK 156
Query: 252 SMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLG 311
+ H +++K ++ + N L+ Y KCG+L L RVF + V W SMI + Q G
Sbjct: 157 AFHGMVIKVLLGSDVFILNSLIHFYAKCGELGLGYRVFVNXPRRDVVSWNSMITAFVQGG 216
Query: 312 YPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQT 371
P EA+ LF+ + +V+PN T+ LSACA+ G+ + YI N + + +
Sbjct: 217 CPEEALELFQEMETQNVKPNGITMVGVLSACAKKSDFEFGRWVHSYIERNRIXESLTLSN 276
Query: 372 SLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYA------------IHGMGDQALN 419
+++ M++KCG + AK +F+++P+KD+ W+ M+ GYA +HG G A+
Sbjct: 277 AMLDMYTKCGSVEDAKRLFDKMPEKDIVSWTTMLVGYAKIGEYDAAQGLAMHGHGKDAIA 336
Query: 420 LFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDL 479
LF KMQ + +KP+AV +T+IL ACSH G+V++G +FF M+ +G+ P ++HY C+VD+
Sbjct: 337 LFSKMQE-DKVKPNAVTFTNILCACSHVGLVEEGRTFFNQMELVYGVLPGVKHYACMVDI 395
Query: 480 LGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNY 539
LGRAG + A++ I +MP+ A VW LL AC H NV L E A L+ L PG+ G Y
Sbjct: 396 LGRAGLLEEAVELIEKMPMAPAASVWGALLGACTIHENVVLAEQACSQLIELEPGNHGAY 455
Query: 540 ILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIR 599
+L++N++ AG W + R LM D L KEPG S +E+DG V F+ GD SH + I
Sbjct: 456 VLLSNIYAKAGKWDRVSGLRKLMRDVGLKKEPGCSSIEVDGIVHEFLVGDNSHPSAKKIY 515
Query: 600 KTLKELHIKLLEAGYI 615
L E+ +L GY+
Sbjct: 516 AKLDEIVARLETIGYV 531
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 80/262 (30%), Positives = 137/262 (52%), Gaps = 20/262 (7%)
Query: 1 MIRNSTNNGSFEETLSTYSSML-QTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKV 59
+IR ++ + ++L + ML Q+ + FTFP ++KA + + ++ GK H V+KV
Sbjct: 106 LIRAYASSSNPHQSLLIFLRMLHQSPDFPDKFTFPFLIKAASELEELFTGKAFHGMVIKV 165
Query: 60 GFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAIL 119
D F+ LI Y+KC + +V P R VVSWNS+I+A + +EA+
Sbjct: 166 LLGSDVFILNSLIHFYAKCGELGLGYRVFVNXP--RRDVVSWNSMITAFVQGGCPEEALE 223
Query: 120 VLKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMY 175
+ +EM ++ + T V V+S C+ F G +H + + + + L+N+++ MY
Sbjct: 224 LFQEMETQNVKPNGITMVGVLSACAKKSDFEFGRWVHSYIER-NRIXESLTLSNAMLDMY 282
Query: 176 AKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLC------------NQMR 223
K G V +A+ +FD++ E IVSWTT++ GY +G + A GL ++M+
Sbjct: 283 TKCGSVEDAKRLFDKMPEKDIVSWTTMLVGYAKIGEYDAAQGLAMHGHGKDAIALFSKMQ 342
Query: 224 RMSVTPDLVVFLNLILGCAQVG 245
V P+ V F N++ C+ VG
Sbjct: 343 EDKVKPNAVTFTNILCACSHVG 364
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 66/292 (22%), Positives = 116/292 (39%), Gaps = 45/292 (15%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI G EE L + M V N T VL ACA + G+ VHS++ +
Sbjct: 208 MITAFVQGGCPEEALELFQEMETQNVKPNGITMVGVLSACAKKSDFEFGRWVHSYIERNR 267
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLND----- 115
+ + ++DMY+KC ++++ D+MP + +VSW +++ +++ D
Sbjct: 268 IXESLTLSNAMLDMYTKCGSVEDAKRLFDKMPE--KDIVSWTTMLVGYAKIGEYDAAQGL 325
Query: 116 -------EAILVLKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGLLNNEIPLA 168
+AI + +M ++ +A TF +++ CS +GL+
Sbjct: 326 AMHGHGKDAIALFSKMQEDKVKPNAVTFTNILCACS------------HVGLVEEGRTFF 373
Query: 169 NSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVT 228
N + +Y V + D +G G + EA L + +M +
Sbjct: 374 NQMELVYGVLPGVKHYACMVDILGRA---------------GLLEEAVEL---IEKMPMA 415
Query: 229 PDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCG 280
P V+ L+ C N+ LA S L++ N LL ++Y K G
Sbjct: 416 PAASVWGALLGACTIHENVVLAEQACSQLIELEPGNHGAY-VLLSNIYAKAG 466
>gi|147780302|emb|CAN70248.1| hypothetical protein VITISV_032008 [Vitis vinifera]
Length = 679
Score = 323 bits (828), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 185/605 (30%), Positives = 321/605 (53%), Gaps = 32/605 (5%)
Query: 21 MLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSK--- 77
ML +G + + FP VLK+C + + G+ VH ++++G D + L++MYSK
Sbjct: 1 MLASGKYPDHNVFPSVLKSCTLMKDLRFGESVHGCIIRLGMGFDLYTCNALMNMYSKFWS 60
Query: 78 -----CSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELS 132
F S K+L +P R + ++H C DE + + + L ++S
Sbjct: 61 LEEGGVQRFCDS-KMLGGIP-EPREI---GKCSNSHDLPCELDERVAGIDQNGDLN-QMS 114
Query: 133 ASTFVSVVSGCSFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIG 192
+ F +G + +++ S Y + R +F+ +
Sbjct: 115 NILYQVNTYKKVFDEGKT------------SDVYSKKEKESYY-----LGSLRKVFEMMP 157
Query: 193 ETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALS 252
+ IVSW T+I G G +A + +M + PD +++ A+ NL
Sbjct: 158 KRDIVSWNTVISGNAQNGMHEDALMMVREMGNADLRPDSFTLSSVLPIFAEYVNLLKGKE 217
Query: 253 MHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGY 312
+H +++GY+ + + + L+ MY KC ++ + RVF + + W S+I G Q G
Sbjct: 218 IHGYAIRNGYDADVFIGSSLIDMYAKCTRVDDSCRVFYMLPQHDGISWNSIIAGCVQNGM 277
Query: 313 PSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTS 372
E + F+++L ++PN + ++ + ACA L +L GK++ YI+ + + N + ++
Sbjct: 278 FDEGLKFFQQMLIAKIKPNHVSFSSIMPACAHLTTLHLGKQLHGYIIRSRFDGNVFIASA 337
Query: 373 LIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKP 432
L+ M++KCG I A+ +F+++ D+ W+AMI GYA+HG A++LF +M+ VEG+KP
Sbjct: 338 LVDMYAKCGNIRTARWIFDKMELYDMVSWTAMIMGYALHGHAYDAISLFKRME-VEGVKP 396
Query: 433 DAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKT 492
+ V + ++L+ACSH+G+VD+ +F SM ++ I P +EHY + DLLGR GR + A +
Sbjct: 397 NYVAFMAVLTACSHAGLVDEAWKYFNSMTQDYRIIPGLEHYAAVADLLGRVGRLEEAYEF 456
Query: 493 IHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMW 552
I +M +E VW+ LL+AC H N+EL E +K L T++P + G Y+L++N++++AG W
Sbjct: 457 ISDMHIEPTGSVWSTLLAACRVHKNIELAEKVSKKLFTVDPQNIGAYVLLSNIYSAAGRW 516
Query: 553 KEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKELHIKLLEA 612
K+A R M D+ + K+P S +EI V FVAGD+SH I + LK L ++
Sbjct: 517 KDARKLRIAMRDKGMKKKPACSWIEIKNKVHAFVAGDKSHPYYDRINEALKVLLEQMERE 576
Query: 613 GYIAE 617
GY+ +
Sbjct: 577 GYVLD 581
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 70/249 (28%), Positives = 126/249 (50%), Gaps = 7/249 (2%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+I + NG E+ L M + +SFT VL A ++ GK +H + ++ G
Sbjct: 167 VISGNAQNGMHEDALMMVREMGNADLRPDSFTLSSVLPIFAEYVNLLKGKEIHGYAIRNG 226
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+ D F+ + LIDMY+KC+ S +V +P +SWNSII+ + + DE +
Sbjct: 227 YDADVFIGSSLIDMYAKCTRVDDSCRVFYMLP--QHDGISWNSIIAGCVQNGMFDEGLKF 284
Query: 121 LKEMWVLGLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
++M + ++ + +F S++ C + G +H + + + + +A++++ MYA
Sbjct: 285 FQQMLIAKIKPNHVSFSSIMPACAHLTTLHLGKQLHGYIIR-SRFDGNVFIASALVDMYA 343
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K G + AR IFD++ +VSWT +I GY G+ +A L +M V P+ V F+
Sbjct: 344 KCGNIRTARWIFDKMELYDMVSWTAMIMGYALHGHAYDAISLFKRMEVEGVKPNYVAFMA 403
Query: 237 LILGCAQVG 245
++ C+ G
Sbjct: 404 VLTACSHAG 412
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 71/297 (23%), Positives = 136/297 (45%), Gaps = 33/297 (11%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+I NG F+E L + ML + N +F ++ ACA++ ++ GK++H ++++
Sbjct: 268 IIAGCVQNGMFDEGLKFFQQMLIAKIKPNHVSFSSIMPACAHLTTLHLGKQLHGYIIRSR 327
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F + F+ + L+DMY+KC + ++R + D+M L +VSW ++I ++ +AI +
Sbjct: 328 FDGNVFIASALVDMYAKCGNIRTARWIFDKM--ELYDMVSWTAMIMGYALHGHAYDAISL 385
Query: 121 LKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGK 180
K M V G++ + F++V++ CS GL++ NS+ Y
Sbjct: 386 FKRMEVEGVKPNYVAFMAVLTACS------------HAGLVDEAWKYFNSMTQDYRIIPG 433
Query: 181 VNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILG 240
+ ++ D +G VG + EA+ + M + P V+ L+
Sbjct: 434 LEHYAAVADLLGR---------------VGRLEEAYEFISDMH---IEPTGSVWSTLLAA 475
Query: 241 CAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSV 297
C N+ LA + L N LL ++Y+ G + AR++ A+ +K +
Sbjct: 476 CRVHKNIELAEKVSKKLFTVDPQNIGAY-VLLSNIYSAAGRWKDARKLRIAMRDKGM 531
>gi|413948598|gb|AFW81247.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 788
Score = 323 bits (828), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 188/541 (34%), Positives = 292/541 (53%), Gaps = 20/541 (3%)
Query: 66 FVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMW 125
FV T L D Y+K + +VLDEMP R +VVSW +++++ +RA +A+ EM
Sbjct: 90 FVSTALADAYAKAGRLDLALQVLDEMPSR--NVVSWTTLVASLARAGRRHDALRRFAEMR 147
Query: 126 VLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIP-LANSVMSMYAKFGK 180
G+ + + ++ C+ +G +H KLGL + +P +AN++ ++YA+ G
Sbjct: 148 ASGVACDSHACSAALTACADAGLLPRGREVHALCAKLGL--DAVPFVANALAALYARCGD 205
Query: 181 VNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRR----MSVTPDLVVFLN 236
V+ A + +G + TT+I YV G EA +M R S +P+ F
Sbjct: 206 VDRALAAVGRMGSHDVAVCTTLIASYVQTGRTEEAIEAFVRMLRDESSNSASPNEYTFSA 265
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
+I C + +L +H+ + G ++ + N LV +Y++ G L A +F + K
Sbjct: 266 VIAACPNMDRAYLGEQLHAQAARRGLSHARSVANSLVKLYSRRGHLSAADAIFRESVVKD 325
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTS--VRPNEATLATTLSACAELGSLSKGKEI 354
V W+++I GY Q G E+ LF + S RPNE TLA+ S CA SL G+++
Sbjct: 326 VVSWSTIISGYTQEGLAEESFALFSEMRHHSSCPRPNEFTLASLFSVCASAASLDTGRQL 385
Query: 355 EEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMG 414
V GLE + V+++L++M+ K G ++ A VF D+ W+AMI G+A HG
Sbjct: 386 HALAVAAGLEHHAMVRSALVNMYGKGGSMSDANVVFSNRTKDDVISWTAMIVGHAEHGHS 445
Query: 415 DQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYL 474
+A LF +M + GLKPD V + +L+ACSH+G ++ GL + +M ++G+EP EHY
Sbjct: 446 KEAFELFEEMCRI-GLKPDHVTFIGVLTACSHAGELELGLRYLNAMNKSYGLEPEKEHYG 504
Query: 475 CLVDLLGRAGRFDLALKTIHEMPVEVQ-AQVWAPLLSACMKHHNVELGEYAAKNLLTLNP 533
C+VDLL RAGR A + I + E + VW LL AC E G+ AA+ ++ P
Sbjct: 505 CVVDLLARAGRIHEAEELIGRIAAEERDGVVWTSLLRACAARGAEETGKIAAERMMEAEP 564
Query: 534 GSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGS---VQVFVAGDR 590
+G +++MANL+ S G+W EAA R LM + + K GWS VE+ G V VFV+GDR
Sbjct: 565 WGSGAHVVMANLYASKGLWCEAAQERHLMKQKGVLKGAGWSSVEVGGDDRGVGVFVSGDR 624
Query: 591 S 591
+
Sbjct: 625 T 625
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 114/417 (27%), Positives = 202/417 (48%), Gaps = 16/417 (3%)
Query: 9 GSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQ 68
G + L ++ M +GV +S L ACA+ + G+ VH+ K+G FV
Sbjct: 134 GRRHDALRRFAEMRASGVACDSHACSAALTACADAGLLPRGREVHALCAKLGLDAVPFVA 193
Query: 69 TGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLG 128
L +Y++C D + + M V ++I+++ + +EAI M
Sbjct: 194 NALAALYARCGDVDRALAAVGRMGS--HDVAVCTTLIASYVQTGRTEEAIEAFVRMLRDE 251
Query: 129 LELSAS----TFVSVVSGCSFRQ----GISMHCCVYKLGLLNNEIPLANSVMSMYAKFGK 180
SAS TF +V++ C G +H + G L++ +ANS++ +Y++ G
Sbjct: 252 SSNSASPNEYTFSAVIAACPNMDRAYLGEQLHAQAARRG-LSHARSVANSLVKLYSRRGH 310
Query: 181 VNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMS--VTPDLVVFLNLI 238
++ A +IF E +VSW+TII GY G E+F L ++MR S P+ +L
Sbjct: 311 LSAADAIFRESVVKDVVSWSTIISGYTQEGLAEESFALFSEMRHHSSCPRPNEFTLASLF 370
Query: 239 LGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVF 298
CA +L +H+L + +G + + + LV+MY K G + A VF + V
Sbjct: 371 SVCASAASLDTGRQLHALAVAAGLEHHAMVRSALVNMYGKGGSMSDANVVFSNRTKDDVI 430
Query: 299 LWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKG-KEIEEY 357
WT+MI G+A+ G+ EA LF+ + + ++P+ T L+AC+ G L G + +
Sbjct: 431 SWTAMIVGHAEHGHSKEAFELFEEMCRIGLKPDHVTFIGVLTACSHAGELELGLRYLNAM 490
Query: 358 IVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVP--DKDLAVWSAMINGYAIHG 412
GLE ++ ++ + ++ GRI++A+E+ R+ ++D VW++++ A G
Sbjct: 491 NKSYGLEPEKEHYGCVVDLLARAGRIHEAEELIGRIAAEERDGVVWTSLLRACAARG 547
>gi|302782567|ref|XP_002973057.1| hypothetical protein SELMODRAFT_98472 [Selaginella moellendorffii]
gi|300159658|gb|EFJ26278.1| hypothetical protein SELMODRAFT_98472 [Selaginella moellendorffii]
Length = 531
Score = 323 bits (828), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 182/536 (33%), Positives = 299/536 (55%), Gaps = 38/536 (7%)
Query: 74 MYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSA 133
MY KC +RKV D ++ R VSW S+IS+++ DEA+ + ++M G++ +
Sbjct: 1 MYGKCGSVEEARKVFD--GIKNRDAVSWTSMISSYANNGFCDEALDLYQQMDADGIQPDS 58
Query: 134 STFVSVVSGCS-FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIG 192
TF S + C+ G ++H + + ++ + +++++MYA+ G V+ AR F++I
Sbjct: 59 ITFTSALLACTKLADGKAIHARIVSSNMESDFV--GSALINMYARCGDVSSARQAFEKIQ 116
Query: 193 ETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNL----- 247
+V WT+++ YV G+ EA L +M V D V ++ + CA +G L
Sbjct: 117 NKHVVCWTSLMTAYVQTGHYREALDLYGRMDHEGVHADGVTYVTALGACASLGALKEGKA 176
Query: 248 ---------FLALSMHSLLLKSGYNNEDPLD----------------NLLVSMYTKCGDL 282
F +L +H+ LL + Y LD N LV+MY KCG L
Sbjct: 177 IHLRVSECGFQSLVVHTALL-TMYAKCGELDAARAVFNRLASNVAVQNALVTMYAKCGSL 235
Query: 283 ELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSAC 342
ELA+ F+A K + W +MIG YAQ G EA++L++ + V P+E T+A++LSAC
Sbjct: 236 ELAKSAFEASGRKDLVSWNAMIGAYAQHGLGREALDLYQTMTSQGVLPDEVTIASSLSAC 295
Query: 343 AELGSLSKGKEIEEYIVLN-GLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVW 401
A GSL G+EI ++ N +S+ VQT+L++M+ +CGR+ A+ +FE + +D+ W
Sbjct: 296 AISGSLQLGREIHSRVLKNQSFQSSLMVQTALVNMYGRCGRLETARSMFEDMGQRDVLSW 355
Query: 402 SAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQ 461
+AM + YA G DQ L+L+ +M + G++P+ + +TSIL CSH+G++ G+ F MQ
Sbjct: 356 TAMTSVYAQQGHADQVLDLYLEMV-LHGIRPNEITFTSILVGCSHAGLLARGVECFLEMQ 414
Query: 462 SNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELG 521
S + P EH+LC+VDLLGR+GR A + MP + + W +L +C H + +
Sbjct: 415 SEHEVVPIREHFLCMVDLLGRSGRLRDAEALVESMPYQPDSVAWLTVLGSCKTHSDADTA 474
Query: 522 EYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVE 577
+ AA+ + L+P +T Y L++++FT+AG+ +EA + M + L K PG S +E
Sbjct: 475 KRAARRVKELDPENTSLYSLLSSIFTAAGLPQEALEVQLSMKEMGLKKPPGQSLIE 530
Score = 195 bits (495), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 135/497 (27%), Positives = 237/497 (47%), Gaps = 45/497 (9%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI + NNG +E L Y M G+ +S TF L AC + DGK +H+ ++
Sbjct: 29 MISSYANNGFCDEALDLYQQMDADGIQPDSITFTSALLACTKLA---DGKAIHARIVSSN 85
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+ D FV + LI+MY++C D S+R+ ++ ++ + VV W S+++A+ + EA+ +
Sbjct: 86 MESD-FVGSALINMYARCGDVSSARQAFEK--IQNKHVVCWTSLMTAYVQTGHYREALDL 142
Query: 121 LKEMWVLGLELSASTFVSVVSGC----SFRQGISMHCCVYKLGL---------------- 160
M G+ T+V+ + C + ++G ++H V + G
Sbjct: 143 YGRMDHEGVHADGVTYVTALGACASLGALKEGKAIHLRVSECGFQSLVVHTALLTMYAKC 202
Query: 161 ------------LNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVN 208
L + + + N++++MYAK G + A+S F+ G +VSW +IG Y
Sbjct: 203 GELDAARAVFNRLASNVAVQNALVTMYAKCGSLELAKSAFEASGRKDLVSWNAMIGAYAQ 262
Query: 209 VGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKS-GYNNEDP 267
G EA L M V PD V + + CA G+L L +HS +LK+ + +
Sbjct: 263 HGLGREALDLYQTMTSQGVLPDEVTIASSLSACAISGSLQLGREIHSRVLKNQSFQSSLM 322
Query: 268 LDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTS 327
+ LV+MY +CG LE AR +F+ + ++ V WT+M YAQ G+ + ++L+ ++
Sbjct: 323 VQTALVNMYGRCGRLETARSMFEDMGQRDVLSWTAMTSVYAQQGHADQVLDLYLEMVLHG 382
Query: 328 VRPNEATLATTLSACAELGSLSKGKE-IEEYIVLNGLESNRQVQTSLIHMFSKCGRINKA 386
+RPNE T + L C+ G L++G E E + + R+ ++ + + GR+ A
Sbjct: 383 IRPNEITFTSILVGCSHAGLLARGVECFLEMQSEHEVVPIREHFLCMVDLLGRSGRLRDA 442
Query: 387 KEVFERVP-DKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSAC- 444
+ + E +P D W ++ H D A + V+ L P+ S+LS+
Sbjct: 443 EALVESMPYQPDSVAWLTVLGSCKTHSDADTAKR---AARRVKELDPENTSLYSLLSSIF 499
Query: 445 SHSGMVDDGLSFFKSMQ 461
+ +G+ + L SM+
Sbjct: 500 TAAGLPQEALEVQLSMK 516
>gi|108707831|gb|ABF95626.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
gi|125586055|gb|EAZ26719.1| hypothetical protein OsJ_10627 [Oryza sativa Japonica Group]
Length = 798
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 193/602 (32%), Positives = 314/602 (52%), Gaps = 63/602 (10%)
Query: 76 SKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEM----------W 125
++ + +R + MP LR+ S+N++++ + R L D A+ + + M
Sbjct: 28 ARAGNIEGARAAFEAMP--LRTTASYNALLAGYFRNRLPDAALGLFRRMPSRDLASYNAL 85
Query: 126 VLGLELSASTFV-------------SVVSGCSFRQGISMHCCVYKLGLLNNEIPLANSV- 171
+ GL L T SVVS S +G H + L ++P N V
Sbjct: 86 ISGLSLRRQTLPDAAAALASIPFPPSVVSFTSLLRGYVRHGLLADAIRLFQQMPERNHVS 145
Query: 172 ----MSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSV 227
+ G+VNEAR +FDE+ + +V+WT ++ GY G + EA L ++M + +V
Sbjct: 146 YTVLLGGLLDAGRVNEARRLFDEMPDRDVVAWTAMLSGYCQAGRITEARALFDEMPKRNV 205
Query: 228 TPDLVVFLNLILGCAQVGNLFLALSMHSLL---------------LKSGYNN-------- 264
V + +I G AQ G + LA + ++ +++G+
Sbjct: 206 ----VSWTAMISGYAQNGEVNLARKLFEVMPERNEVSWTAMLVGYIQAGHVEDAAELFNA 261
Query: 265 --EDPLD--NLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLF 320
E P+ N ++ + + G ++ A+ VF+ + E+ W++MI Y Q + EA++ F
Sbjct: 262 MPEHPVAACNAMMVGFGQRGMVDAAKTVFEKMCERDDGTWSAMIKAYEQNEFLMEALSTF 321
Query: 321 KRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKC 380
+ +L VRPN ++ + L+ CA L L G+E+ ++ + + ++LI M+ KC
Sbjct: 322 REMLWRGVRPNYPSVISILTVCAALAVLDYGREVHAAMLRCSFDMDVFAVSALITMYIKC 381
Query: 381 GRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSI 440
G ++KAK VF KD+ +W++MI GYA HG+G+QAL +F+ M+ + G+ PD + Y
Sbjct: 382 GNLDKAKRVFHTFEPKDIVMWNSMITGYAQHGLGEQALGIFHDMR-LAGMSPDGITYIGA 440
Query: 441 LSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEV 500
L+ACS++G V +G F SM N I P EHY C+VDLLGR+G + A I MPVE
Sbjct: 441 LTACSYTGKVKEGREIFNSMTVNSSIRPGAEHYSCMVDLLGRSGLVEEAFDLIKNMPVEP 500
Query: 501 QAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARG 560
A +W L+ AC H N E+ E+AAK LL L PG+ G Y+L+++++TS G W++A+ R
Sbjct: 501 DAVIWGALMGACRMHRNAEIAEFAAKKLLELEPGNAGPYVLLSHIYTSVGRWEDASKMRK 560
Query: 561 LMDDRRLTKEPGWSQVEIDGSVQVFVAGD-RSHHLSVDIRKTLKELHIKLLEAGYIAEAD 619
+ R L K PG S +E D V +F +GD +H I + L++L L+E+GY A+
Sbjct: 561 FISSRNLNKSPGCSWIEYDKRVHLFTSGDVLAHPEHAAILRILEKLDGLLMESGYSADGS 620
Query: 620 IV 621
V
Sbjct: 621 FV 622
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 89/413 (21%), Positives = 197/413 (47%), Gaps = 17/413 (4%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
++R +G + + + M + N ++ ++L + + + +R+ +
Sbjct: 118 LLRGYVRHGLLADAIRLFQQMPER----NHVSYTVLLGGLLDAGRVNEARRLFDEMP--- 170
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+D T ++ Y + +R + DEMP R +VVSW ++IS +++ N E L
Sbjct: 171 -DRDVVAWTAMLSGYCQAGRITEARALFDEMPKR--NVVSWTAMISGYAQ---NGEVNLA 224
Query: 121 LKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGK 180
K V+ E + ++ +++ G + G + + + N++M + + G
Sbjct: 225 RKLFEVMP-ERNEVSWTAMLVG-YIQAGHVEDAAELFNAMPEHPVAACNAMMVGFGQRGM 282
Query: 181 VNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILG 240
V+ A+++F+++ E +W+ +I Y + EA +M V P+ ++++
Sbjct: 283 VDAAKTVFEKMCERDDGTWSAMIKAYEQNEFLMEALSTFREMLWRGVRPNYPSVISILTV 342
Query: 241 CAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLW 300
CA + L +H+ +L+ ++ + + L++MY KCG+L+ A+RVF K + +W
Sbjct: 343 CAALAVLDYGREVHAAMLRCSFDMDVFAVSALITMYIKCGNLDKAKRVFHTFEPKDIVMW 402
Query: 301 TSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVL 360
SMI GYAQ G +A+ +F + + P+ T L+AC+ G + +G+EI + +
Sbjct: 403 NSMITGYAQHGLGEQALGIFHDMRLAGMSPDGITYIGALTACSYTGKVKEGREIFNSMTV 462
Query: 361 N-GLESNRQVQTSLIHMFSKCGRINKAKEVFERVP-DKDLAVWSAMINGYAIH 411
N + + + ++ + + G + +A ++ + +P + D +W A++ +H
Sbjct: 463 NSSIRPGAEHYSCMVDLLGRSGLVEEAFDLIKNMPVEPDAVIWGALMGACRMH 515
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 97/415 (23%), Positives = 178/415 (42%), Gaps = 76/415 (18%)
Query: 169 NSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQM------ 222
N+ ++ A+ G + AR+ F+ + + S+ ++ GY + A GL +M
Sbjct: 21 NARIAHLARAGNIEGARAAFEAMPLRTTASYNALLAGYFRNRLPDAALGLFRRMPSRDLA 80
Query: 223 -----------RRMSV------------TPDLVVFLNLILGCAQVGNLFLALSMHSL--- 256
RR ++ P +V F +L+ G + G L A+ +
Sbjct: 81 SYNALISGLSLRRQTLPDAAAALASIPFPPSVVSFTSLLRGYVRHGLLADAIRLFQQMPE 140
Query: 257 ------------LLKSGYNNE-----DPLDN-------LLVSMYTKCGDLELARRVFDAV 292
LL +G NE D + + ++S Y + G + AR +FD +
Sbjct: 141 RNHVSYTVLLGGLLDAGRVNEARRLFDEMPDRDVVAWTAMLSGYCQAGRITEARALFDEM 200
Query: 293 LEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGK 352
+++V WT+MI GYAQ G VNL ++L + NE + L + G +
Sbjct: 201 PKRNVVSWTAMISGYAQNG----EVNLARKLFEVMPERNEVSWTAMLVGYIQAGHVEDAA 256
Query: 353 EIEEYIVLNGL-ESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIH 411
E+ N + E +++ F + G ++ AK VFE++ ++D WSAMI Y +
Sbjct: 257 EL-----FNAMPEHPVAACNAMMVGFGQRGMVDAAKTVFEKMCERDDGTWSAMIKAYEQN 311
Query: 412 GMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSM-QSNFGIEPSI 470
+AL+ F +M G++P+ SIL+ C+ ++D G +M + +F ++ +
Sbjct: 312 EFLMEALSTFREMLW-RGVRPNYPSVISILTVCAALAVLDYGREVHAAMLRCSFDMD--V 368
Query: 471 EHYLCLVDLLGRAGRFDLALKTIHEM-PVEVQAQVWAPLLSACMKHHNVELGEYA 524
L+ + + G D A + H P ++ +W +++ +H LGE A
Sbjct: 369 FAVSALITMYIKCGNLDKAKRVFHTFEPKDI--VMWNSMITGYAQH---GLGEQA 418
>gi|119638439|gb|ABL85030.1| hypothetical protein 57h21.3 [Brachypodium sylvaticum]
Length = 618
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 184/549 (33%), Positives = 306/549 (55%), Gaps = 25/549 (4%)
Query: 63 QDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLK 122
+D T L+ Y++ +R + D R R+VV+W +++S ++RA DEA + +
Sbjct: 64 RDVVSWTALVAAYARQGMLHDARALFDRPDAR-RNVVTWTALLSGYARAGRVDEAEALFQ 122
Query: 123 EMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGLLNNEIPLA-----NSVMSMYAK 177
M +VVS + + + V L + +P+ N +++ +
Sbjct: 123 RM----------PERNVVSWNTMLEAYTSAGRVRDAWTLFDGMPVRDAGSWNILLAALVR 172
Query: 178 FGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNL 237
G +++AR +FD + E ++++WTT++ G G+V+EA L + M +V V + +
Sbjct: 173 SGNMDKARKLFDRMPERNVMAWTTMVAGIARSGSVDEARALFDGMPERNV----VSWNAM 228
Query: 238 ILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSV 297
I G A+ + A H L +K + N++++ + + DLE A+ +FD + ++V
Sbjct: 229 ISGYARNHRIDEA---HDLFMKMPTRDIASW-NIMITGFIQDRDLERAQDLFDKMPRRNV 284
Query: 298 FLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEY 357
WT+M+ GY Q A+ +F +L +RPN+ T + AC+ L LS+G+++ +
Sbjct: 285 ITWTTMMNGYLQSMQSETALQIFNGMLVEGIRPNQVTFLGAVDACSNLAGLSEGQQVHQM 344
Query: 358 IVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQA 417
I + + ++++L+++++KCG I A++VF+ +KD+ W+ MI YA HG+G +A
Sbjct: 345 ICKTSFQFDTFIESTLMNLYAKCGEIRLARKVFDLSKEKDVISWNGMIAAYAHHGVGVEA 404
Query: 418 LNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLV 477
++L+ KMQ +G KP+ V Y +LSACSHSG+VD+GL F+ M + I EHY CL+
Sbjct: 405 IHLYEKMQE-KGYKPNDVTYVGLLSACSHSGLVDEGLRIFEYMVKDRSIAVRDEHYTCLI 463
Query: 478 DLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTG 537
DL RAGR A + IH + VE + VW LL C H N +G+ AA+NLL P + G
Sbjct: 464 DLCSRAGRLGDAKRLIHFLKVEPSSTVWNALLGGCNSHGNESIGDLAARNLLEAEPNNAG 523
Query: 538 NYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVD 597
Y L+ N++ SAG WKEAA R M+DR L K+PG S +E++ V VFV+ D+SH S
Sbjct: 524 TYTLLCNIYASAGKWKEAAKIRSEMNDRGLKKQPGCSWIEVENKVHVFVSRDKSHSESDL 583
Query: 598 IRKTLKELH 606
I L+++H
Sbjct: 584 INSLLQDIH 592
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 90/380 (23%), Positives = 183/380 (48%), Gaps = 48/380 (12%)
Query: 169 NSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVT 228
N ++ A G+V++AR +FD + +VSWT ++ Y G +++A L + R
Sbjct: 39 NRRVAELAAAGRVSDARRLFDRTPDRDVVSWTALVAAYARQGMLHDARALFD---RPDAR 95
Query: 229 PDLVVFLNLILGCAQVGNLFLA------------LSMHSLL--------LKSGYNNEDPL 268
++V + L+ G A+ G + A +S +++L ++ + D +
Sbjct: 96 RNVVTWTALLSGYARAGRVDEAEALFQRMPERNVVSWNTMLEAYTSAGRVRDAWTLFDGM 155
Query: 269 D-------NLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFK 321
N+L++ + G+++ AR++FD + E++V WT+M+ G A+ G EA LF
Sbjct: 156 PVRDAGSWNILLAALVRSGNMDKARKLFDRMPERNVMAWTTMVAGIARSGSVDEARALFD 215
Query: 322 RLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQT--SLIHMFSK 379
+ + +V +S A + ++ I+E L R + + +I F +
Sbjct: 216 GMPERNV----------VSWNAMISGYARNHRIDEAHDLFMKMPTRDIASWNIMITGFIQ 265
Query: 380 CGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTS 439
+ +A+++F+++P +++ W+ M+NGY + AL +F M VEG++P+ V +
Sbjct: 266 DRDLERAQDLFDKMPRRNVITWTTMMNGYLQSMQSETALQIFNGML-VEGIRPNQVTFLG 324
Query: 440 ILSACSHSGMVDDGLSFFKSM-QSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPV 498
+ ACS+ + +G + + +++F + IE L++L + G LA K + ++
Sbjct: 325 AVDACSNLAGLSEGQQVHQMICKTSFQFDTFIES--TLMNLYAKCGEIRLARK-VFDLSK 381
Query: 499 EVQAQVWAPLLSACMKHHNV 518
E W +++A HH V
Sbjct: 382 EKDVISWNGMIAA-YAHHGV 400
Score = 92.0 bits (227), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 111/205 (54%), Gaps = 7/205 (3%)
Query: 12 EETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGL 71
E L ++ ML G+ N TF + AC+N+ + +G++VH + K FQ D F+++ L
Sbjct: 301 ETALQIFNGMLVEGIRPNQVTFLGAVDACSNLAGLSEGQQVHQMICKTSFQFDTFIESTL 360
Query: 72 IDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLEL 131
+++Y+KC + +RKV D + + V+SWN +I+A++ + EAI + ++M G +
Sbjct: 361 MNLYAKCGEIRLARKVFD--LSKEKDVISWNGMIAAYAHHGVGVEAIHLYEKMQEKGYKP 418
Query: 132 SASTFVSVVSGCSFRQGISMHCCVYKLGLLNNEIPLANS----VMSMYAKFGKVNEARSI 187
+ T+V ++S CS + +++ + + I + + ++ + ++ G++ +A+ +
Sbjct: 419 NDVTYVGLLSACSHSGLVDEGLRIFEYMVKDRSIAVRDEHYTCLIDLCSRAGRLGDAKRL 478
Query: 188 FDEIG-ETSIVSWTTIIGGYVNVGN 211
+ E S W ++GG + GN
Sbjct: 479 IHFLKVEPSSTVWNALLGGCNSHGN 503
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 79/160 (49%), Gaps = 23/160 (14%)
Query: 364 ESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYK 423
+ NR+V + GR++ A+ +F+R PD+D+ W+A++ YA GM A LF
Sbjct: 37 DPNRRVAE-----LAAAGRVSDARRLFDRTPDRDVVSWTALVAAYARQGMLHDARALFD- 90
Query: 424 MQHVEGLKPDA----VVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDL 479
+PDA V +T++LS + +G VD+ + F+ M E ++ + +++
Sbjct: 91 -------RPDARRNVVTWTALLSGYARAGRVDEAEALFQRMP-----ERNVVSWNTMLEA 138
Query: 480 LGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVE 519
AGR A MPV A W LL+A ++ N++
Sbjct: 139 YTSAGRVRDAWTLFDGMPVR-DAGSWNILLAALVRSGNMD 177
>gi|147818712|emb|CAN65041.1| hypothetical protein VITISV_009461 [Vitis vinifera]
Length = 1072
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 190/638 (29%), Positives = 315/638 (49%), Gaps = 63/638 (9%)
Query: 38 KACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMP----- 92
K CA ++ ++H+H+ G + T LI+ Y++ F SS++V D P
Sbjct: 356 KRCATSTTL---TQLHAHLFITGLHRHPPASTKLIESYAQIGIFESSKRVFDTFPKPDSF 412
Query: 93 ---VRLRSVVSW-----------------------NSIISAHSRACLN------------ 114
V ++ V W N + + +AC
Sbjct: 413 MWGVLIKCYV-WGGFFEEAVSLYHEMVYQDQTQISNFVFPSVLKACSGFGDLSVGGKNGQ 471
Query: 115 -DEAILVLKEMWVLGLELSASTFVSVVSGCS------------FRQGISMHCCVYKLGLL 161
E + + +M +E + T +SV CS ++G S+H V + +
Sbjct: 472 ASEGLDMFSQMISEAVEPDSVTMLSVTEACSELGSLRLGRLGRVKEGRSVHGFVIRRAMD 531
Query: 162 NNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQ 221
L ++M +YA G + + +F+ I E +I+SW T+I + G EA L Q
Sbjct: 532 PELDFLGPALMELYADTGNLRDCHKVFETIKEKTILSWNTLISIFTRNGQPEEALLLFVQ 591
Query: 222 MRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGD 281
M+ + PD + + C + L +H ++K+G N D + N L+ MY KCG
Sbjct: 592 MQTQGLMPDSYSLASSLSACGTISFSQLGAQIHGYIIKTG-NFNDFVQNALIDMYAKCGF 650
Query: 282 LELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSA 341
+ A ++F+ + EKS+ W SMI G++Q GY EA+ LF ++ V+ ++ T + + A
Sbjct: 651 VHSANKMFEKIKEKSLVTWNSMICGFSQNGYSVEAITLFDQMYMNCVKMDKLTFLSVIQA 710
Query: 342 CAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVW 401
C+ LG L KGK + +++ GL + + T+L M+SKCG + A VF+R+ ++ + W
Sbjct: 711 CSHLGYLEKGKWVHHKLIMYGLRKDSYLDTALTDMYSKCGELQMAHGVFDRMSERSIVSW 770
Query: 402 SAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQ 461
S MI GY +HG + ++LF +M G+KP+ + + ILSACSH+G V++G +F SM
Sbjct: 771 SVMIAGYGMHGQINATISLFNQMLG-SGIKPNDITFMHILSACSHAGAVEEGKLYFNSM- 828
Query: 462 SNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELG 521
S FG+EP +H+ C+VDLL RAG + A + I +P + +W LL+ C H +++
Sbjct: 829 SEFGVEPKHDHFACMVDLLSRAGDLNGAYQIITSLPFPANSSIWGALLNGCRIHKRIDII 888
Query: 522 EYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGS 581
+ KNLL ++ TG Y L++N++ G W + R +M + L K PG+S +EID
Sbjct: 889 KSIEKNLLDVDTADTGYYTLLSNIYAEEGTWDKFGKVRSMMKSKGLRKVPGYSTIEIDKK 948
Query: 582 VQVFVAGDRSHHLSVDIRKTLKELHIKLLEAGYIAEAD 619
+ F GD SH + DI + L+ + Y +E D
Sbjct: 949 IYRFGPGDTSHSQTKDIYRFLENFRSLVHAQVYDSEPD 986
Score = 201 bits (511), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 125/418 (29%), Positives = 221/418 (52%), Gaps = 18/418 (4%)
Query: 8 NGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINS--------IWDGKRVHSHVLKV 59
NG E L +S M+ V +S T V +AC+ + S + +G+ VH V++
Sbjct: 469 NGQASEGLDMFSQMISEAVEPDSVTMLSVTEACSELGSLRLGRLGRVKEGRSVHGFVIRR 528
Query: 60 GFQQD-AFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAI 118
+ F+ L+++Y+ + KV + ++ ++++SWN++IS +R +EA+
Sbjct: 529 AMDPELDFLGPALMELYADTGNLRDCHKVFE--TIKEKTILSWNTLISIFTRNGQPEEAL 586
Query: 119 LVLKEMWVLGLELSASTFVSVVSGC---SFRQ-GISMHCCVYKLGLLNNEIPLANSVMSM 174
L+ +M GL + + S +S C SF Q G +H + K G N+ + N+++ M
Sbjct: 587 LLFVQMQTQGLMPDSYSLASSLSACGTISFSQLGAQIHGYIIKTGNFNDFV--QNALIDM 644
Query: 175 YAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVF 234
YAK G V+ A +F++I E S+V+W ++I G+ G EA L +QM V D + F
Sbjct: 645 YAKCGFVHSANKMFEKIKEKSLVTWNSMICGFSQNGYSVEAITLFDQMYMNCVKMDKLTF 704
Query: 235 LNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLE 294
L++I C+ +G L +H L+ G + LD L MY+KCG+L++A VFD + E
Sbjct: 705 LSVIQACSHLGYLEKGKWVHHKLIMYGLRKDSYLDTALTDMYSKCGELQMAHGVFDRMSE 764
Query: 295 KSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEI 354
+S+ W+ MI GY G + ++LF ++L + ++PN+ T LSAC+ G++ +GK
Sbjct: 765 RSIVSWSVMIAGYGMHGQINATISLFNQMLGSGIKPNDITFMHILSACSHAGAVEEGKLY 824
Query: 355 EEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVP-DKDLAVWSAMINGYAIH 411
+ G+E ++ + S+ G +N A ++ +P + ++W A++NG IH
Sbjct: 825 FNSMSEFGVEPKHDHFACMVDLLSRAGDLNGAYQIITSLPFPANSSIWGALLNGCRIH 882
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 86/306 (28%), Positives = 159/306 (51%), Gaps = 9/306 (2%)
Query: 6 TNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDA 65
T NG EE L + M G+ +S++ L AC I+ G ++H +++K G D
Sbjct: 577 TRNGQPEEALLLFVQMQTQGLMPDSYSLASSLSACGTISFSQLGAQIHGYIIKTGNFND- 635
Query: 66 FVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMW 125
FVQ LIDMY+KC S+ K+ ++ ++ +S+V+WNS+I S+ + EAI + +M+
Sbjct: 636 FVQNALIDMYAKCGFVHSANKMFEK--IKEKSLVTWNSMICGFSQNGYSVEAITLFDQMY 693
Query: 126 VLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKV 181
+ +++ TF+SV+ CS +G +H + GL + L ++ MY+K G++
Sbjct: 694 MNCVKMDKLTFLSVIQACSHLGYLEKGKWVHHKLIMYGLRKDSY-LDTALTDMYSKCGEL 752
Query: 182 NEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGC 241
A +FD + E SIVSW+ +I GY G +N L NQM + P+ + F++++ C
Sbjct: 753 QMAHGVFDRMSERSIVSWSVMIAGYGMHGQINATISLFNQMLGSGIKPNDITFMHILSAC 812
Query: 242 AQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAV-LEKSVFLW 300
+ G + + + + G + +V + ++ GDL A ++ ++ + +W
Sbjct: 813 SHAGAVEEGKLYFNSMSEFGVEPKHDHFACMVDLLSRAGDLNGAYQIITSLPFPANSSIW 872
Query: 301 TSMIGG 306
+++ G
Sbjct: 873 GALLNG 878
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 77/144 (53%), Gaps = 2/144 (1%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI + NG E ++ + M V + TF V++AC+++ + GK VH ++ G
Sbjct: 672 MICGFSQNGYSVEAITLFDQMYMNCVKMDKLTFLSVIQACSHLGYLEKGKWVHHKLIMYG 731
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
++D+++ T L DMYSKC + + V D M RS+VSW+ +I+ + + I +
Sbjct: 732 LRKDSYLDTALTDMYSKCGELQMAHGVFDRMSE--RSIVSWSVMIAGYGMHGQINATISL 789
Query: 121 LKEMWVLGLELSASTFVSVVSGCS 144
+M G++ + TF+ ++S CS
Sbjct: 790 FNQMLGSGIKPNDITFMHILSACS 813
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 77/172 (44%), Gaps = 21/172 (12%)
Query: 331 NEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVF 390
N + T+ CA +L+ ++ ++ + GL + T LI +++ G +K VF
Sbjct: 347 NSSRSLTSHKRCATSTTLT---QLHAHLFITGLHRHPPASTKLIESYAQIGIFESSKRVF 403
Query: 391 ERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACS----- 445
+ P D +W +I Y G ++A++L+++M + + + V+ S+L ACS
Sbjct: 404 DTFPKPDSFMWGVLIKCYVWGGFFEEAVSLYHEMVYQDQTQISNFVFPSVLKACSGFGDL 463
Query: 446 ----HSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDL--------LGRAGR 485
+G +GL F M S +EP L + + LGR GR
Sbjct: 464 SVGGKNGQASEGLDMFSQMISE-AVEPDSVTMLSVTEACSELGSLRLGRLGR 514
Score = 42.7 bits (99), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 30/150 (20%), Positives = 73/150 (48%), Gaps = 7/150 (4%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI +G T+S ++ ML +G+ N TF +L AC++ ++ +GK + + + G
Sbjct: 773 MIAGYGMHGQINATISLFNQMLGSGIKPNDITFMHILSACSHAGAVEEGKLYFNSMSEFG 832
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+ ++D+ S+ D + +++ +P S + W ++++ C + I +
Sbjct: 833 VEPKHDHFACMVDLLSRAGDLNGAYQIITSLPFPANSSI-WGALLN----GCRIHKRIDI 887
Query: 121 LK--EMWVLGLELSASTFVSVVSGCSFRQG 148
+K E +L ++ + + + +++S +G
Sbjct: 888 IKSIEKNLLDVDTADTGYYTLLSNIYAEEG 917
>gi|297807343|ref|XP_002871555.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297317392|gb|EFH47814.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 822
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 184/621 (29%), Positives = 324/621 (52%), Gaps = 10/621 (1%)
Query: 6 TNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDA 65
T + ++ + YS + + G N F LK +++ +HS ++K+G+ +A
Sbjct: 122 TQGYACQDPVGLYSRLHREGHELNPHVFTSFLKLFVSLDKAEICWWLHSPIVKLGYDSNA 181
Query: 66 FVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMW 125
FV LI+ YS C S+R V + + + +V W I+S + ++++ +L M
Sbjct: 182 FVGAALINAYSVCGSVDSARSVFE--GILCKDIVVWAGIVSCYVENGCFEDSLQLLSRMG 239
Query: 126 VLGLELSASTFVSVVSGC----SFRQGISMHCCVYKLGL-LNNEIPLANSVMSMYAKFGK 180
+ G + TF + + +F S+H + K L+ + + ++ +Y + G
Sbjct: 240 MDGFMPNNYTFDTALKASIGLGAFHFAKSVHGQILKTCYELDPRVGVG--LLQLYTQLGD 297
Query: 181 VNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILG 240
+++A +F+E+ + +V W+ +I + G N+A + +MR V P+ +++ G
Sbjct: 298 MSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNKAVDIFIRMREGFVVPNEFTLSSILNG 357
Query: 241 CAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLW 300
CA L +H L++K G++ + + N L+ +Y KC ++ A ++F + K+V W
Sbjct: 358 CAIGKCSGLGEQLHGLVVKVGFDLDVYVSNALIDVYAKCEKMDTAVKLFAELSSKNVVSW 417
Query: 301 TSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVL 360
++I GY LG +A+N+F+ L+ V E T ++ L ACA L S+ G ++ +
Sbjct: 418 NTVIVGYENLGEGGKALNMFREALRNQVSVTEVTFSSALGACASLASMELGVQVHGLAIK 477
Query: 361 NGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNL 420
V SLI M++KCG I A+ VF + D+A W+A+I+GY+ HG+G QAL +
Sbjct: 478 TNNAKRVAVSNSLIDMYAKCGDIKVAQTVFNEMETIDVASWNALISGYSTHGLGRQALRI 537
Query: 421 FYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLL 480
F M+ + KP+ + + +LS CS++G++D G F+SM + GIEP +EHY C+V L
Sbjct: 538 FDIMKGSD-CKPNGLTFLGVLSGCSNAGLIDQGQDCFESMICDHGIEPCLEHYTCMVRLF 596
Query: 481 GRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYI 540
GR+G+ D A+ I +P E +W +LSA M +N E +A+ +L +NP Y+
Sbjct: 597 GRSGQLDKAMNLIEGIPYEPSVMIWRAMLSASMNQYNEEFARRSAEEILKINPKDEATYV 656
Query: 541 LMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRK 600
L++N++ A W A+ R M ++ + KEPG S +E G V F G H I
Sbjct: 657 LLSNMYAGAKQWANVASIRKSMKEKGVKKEPGLSWIEHQGDVHFFSVGSSDHPDMKLING 716
Query: 601 TLKELHIKLLEAGYIAEADIV 621
L+ L++K AGY+ + + V
Sbjct: 717 MLEWLNMKATRAGYVPDRNAV 737
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 126/492 (25%), Positives = 236/492 (47%), Gaps = 16/492 (3%)
Query: 29 NSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVL 88
+S + +L+ C N K +H +LK G D F L++ Y K + +
Sbjct: 48 DSHAYGTMLRRCIRKNDSVSAKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNLF 107
Query: 89 DEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVS----VVSGCS 144
DEMP R+ VS+ ++ + AC + + + + G EL+ F S VS
Sbjct: 108 DEMPE--RNNVSYVTLTQGY--AC--QDPVGLYSRLHREGHELNPHVFTSFLKLFVSLDK 161
Query: 145 FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIG 204
+H + KLG +N + ++++ Y+ G V+ ARS+F+ I IV W I+
Sbjct: 162 AEICWWLHSPIVKLGYDSNAF-VGAALINAYSVCGSVDSARSVFEGILCKDIVVWAGIVS 220
Query: 205 GYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNN 264
YV G ++ L ++M P+ F + +G A S+H +LK+ Y
Sbjct: 221 CYVENGCFEDSLQLLSRMGMDGFMPNNYTFDTALKASIGLGAFHFAKSVHGQILKTCYEL 280
Query: 265 EDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLL 324
+ + L+ +YT+ GD+ A +VF+ + + V W+ MI + Q G+ ++AV++F R+
Sbjct: 281 DPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNKAVDIFIRMR 340
Query: 325 KTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRIN 384
+ V PNE TL++ L+ CA G+++ +V G + + V +LI +++KC +++
Sbjct: 341 EGFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDVYVSNALIDVYAKCEKMD 400
Query: 385 KAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSAC 444
A ++F + K++ W+ +I GY G G +ALN+F + + + V ++S L AC
Sbjct: 401 TAVKLFAELSSKNVVSWNTVIVGYENLGEGGKALNMFREALRNQ-VSVTEVTFSSALGAC 459
Query: 445 SHSGMVDDGLSFFK-SMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQ 503
+ ++ G+ ++++N ++ + L+D+ + G +A +EM +
Sbjct: 460 ASLASMELGVQVHGLAIKTNNAKRVAVSN--SLIDMYAKCGDIKVAQTVFNEMET-IDVA 516
Query: 504 VWAPLLSACMKH 515
W L+S H
Sbjct: 517 SWNALISGYSTH 528
Score = 118 bits (296), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 79/309 (25%), Positives = 149/309 (48%), Gaps = 7/309 (2%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI NG + + + M + V N FT +L CA G+++H V+KVG
Sbjct: 319 MIARFCQNGFCNKAVDIFIRMREGFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVG 378
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F D +V LID+Y+KC ++ K+ E+ ++VVSWN++I + +A+ +
Sbjct: 379 FDLDVYVSNALIDVYAKCEKMDTAVKLFAELSS--KNVVSWNTVIVGYENLGEGGKALNM 436
Query: 121 LKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGLLNN---EIPLANSVMSMYAK 177
+E + ++ TF S + C+ + + V+ L + N + ++NS++ MYAK
Sbjct: 437 FREALRNQVSVTEVTFSSALGACASLASMELGVQVHGLAIKTNNAKRVAVSNSLIDMYAK 496
Query: 178 FGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNL 237
G + A+++F+E+ + SW +I GY G +A + + M+ P+ + FL +
Sbjct: 497 CGDIKVAQTVFNEMETIDVASWNALISGYSTHGLGRQALRIFDIMKGSDCKPNGLTFLGV 556
Query: 238 ILGCAQVGNLFLALS-MHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAV-LEK 295
+ GC+ G + S++ G +V ++ + G L+ A + + + E
Sbjct: 557 LSGCSNAGLIDQGQDCFESMICDHGIEPCLEHYTCMVRLFGRSGQLDKAMNLIEGIPYEP 616
Query: 296 SVFLWTSMI 304
SV +W +M+
Sbjct: 617 SVMIWRAML 625
>gi|449443492|ref|XP_004139511.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
mitochondrial-like [Cucumis sativus]
Length = 678
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 164/497 (32%), Positives = 293/497 (58%), Gaps = 7/497 (1%)
Query: 129 LELSASTFVSVVSGCSF----RQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEA 184
LE + + +++ C++ +QG ++H + + +++ L N +++MYAK G + EA
Sbjct: 101 LEPERTLYSKMLNKCTYLRKLKQGRAIHAHI-QSSTFEDDLVLLNFILNMYAKCGSLEEA 159
Query: 185 RSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQV 244
+ +FD++ +VSWT +I GY G +EA L +M + P+ +L+
Sbjct: 160 QDLFDKMPTKDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKASGTG 219
Query: 245 GNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMI 304
+ +H+ LK GY+ + + L+ MY + + A+ +F+++ K+V W ++I
Sbjct: 220 PSDHHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAAKNVVSWNALI 279
Query: 305 GGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLE 364
G+A+ G + LF ++L+ P T ++ +ACA GSL +GK + +++ +G +
Sbjct: 280 AGHARKGEGEHVMRLFLQMLRQGFEPTHFTYSSVFTACASSGSLEQGKWVHAHVIKSGGQ 339
Query: 365 SNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKM 424
+ +LI M++K G I AK+VF R+ +D+ W+++I+GYA HG+G +AL LF +M
Sbjct: 340 PIAYIGNTLIDMYAKSGSIKDAKKVFRRLVKQDIVSWNSIISGYAQHGLGAEALQLFEQM 399
Query: 425 QHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAG 484
+ ++P+ + + S+L+ACSHSG++D+G +F+ M+ + IE + H++ +VDLLGRAG
Sbjct: 400 LKAK-VQPNEITFLSVLTACSHSGLLDEGQYYFELMKKH-KIEAQVAHHVTVVDLLGRAG 457
Query: 485 RFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMAN 544
R + A K I EMP++ A VW LL +C H N++LG YAA+ + L+P +G ++L++N
Sbjct: 458 RLNEANKFIEEMPIKPTAAVWGALLGSCRMHKNMDLGVYAAEQIFELDPHDSGPHVLLSN 517
Query: 545 LFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKE 604
++ SAG +AA R +M + + KEP S VEI+ V VFVA D SH + +I++ ++
Sbjct: 518 IYASAGRLSDAAKVRKMMKESGVKKEPACSWVEIENEVHVFVANDDSHPMREEIQRMWEK 577
Query: 605 LHIKLLEAGYIAEADIV 621
+ K+ E GY+ + V
Sbjct: 578 ISGKIKEIGYVPDTSHV 594
Score = 203 bits (516), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 128/470 (27%), Positives = 234/470 (49%), Gaps = 28/470 (5%)
Query: 7 NNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAF 66
N GS E + YS ML C + + G+ +H+H+ F+ D
Sbjct: 97 NCGSLEPERTLYSKMLNK---------------CTYLRKLKQGRAIHAHIQSSTFEDDLV 141
Query: 67 VQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWV 126
+ +++MY+KC ++ + D+MP + +VSW +IS +S++ EA+ + +M
Sbjct: 142 LLNFILNMYAKCGSLEEAQDLFDKMPTK--DMVSWTVLISGYSQSGQASEALALFPKMLH 199
Query: 127 LGLELSASTFVSVV----SGCSFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVN 182
LG + + T S++ +G S G +H K G N + + +S++ MYA++ +
Sbjct: 200 LGFQPNEFTLSSLLKASGTGPSDHHGRQLHAFSLKYGYDMN-VHVGSSLLDMYARWAHMR 258
Query: 183 EARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCA 242
EA+ IF+ + ++VSW +I G+ G L QM R P + ++ CA
Sbjct: 259 EAKVIFNSLAAKNVVSWNALIAGHARKGEGEHVMRLFLQMLRQGFEPTHFTYSSVFTACA 318
Query: 243 QVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTS 302
G+L +H+ ++KSG + N L+ MY K G ++ A++VF ++++ + W S
Sbjct: 319 SSGSLEQGKWVHAHVIKSGGQPIAYIGNTLIDMYAKSGSIKDAKKVFRRLVKQDIVSWNS 378
Query: 303 MIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNG 362
+I GYAQ G +EA+ LF+++LK V+PNE T + L+AC+ G L +G+ E + +
Sbjct: 379 IISGYAQHGLGAEALQLFEQMLKAKVQPNEITFLSVLTACSHSGLLDEGQYYFELMKKHK 438
Query: 363 LESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDL-AVWSAMINGYAIHGMGDQALNLF 421
+E+ +++ + + GR+N+A + E +P K AVW A++ +H D +
Sbjct: 439 IEAQVAHHVTVVDLLGRAGRLNEANKFIEEMPIKPTAAVWGALLGSCRMHKNMDLGV--- 495
Query: 422 YKMQHVEGLKP-DAVVYTSILSACSHSGMVDDGLSFFKSM-QSNFGIEPS 469
Y + + L P D+ + + + + +G + D K M +S EP+
Sbjct: 496 YAAEQIFELDPHDSGPHVLLSNIYASAGRLSDAAKVRKMMKESGVKKEPA 545
Score = 133 bits (335), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 85/313 (27%), Positives = 154/313 (49%), Gaps = 14/313 (4%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+I + +G E L+ + ML G N FT +LKA S G+++H+ LK G
Sbjct: 177 LISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKASGTGPSDHHGRQLHAFSLKYG 236
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+ + V + L+DMY++ + ++ + + + ++VVSWN++I+ H+R + + +
Sbjct: 237 YDMNVHVGSSLLDMYARWAHMREAKVIFNSLAA--KNVVSWNALIAGHARKGEGEHVMRL 294
Query: 121 LKEMWVLGLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLA---NSVMS 173
+M G E + T+ SV + C S QG +H V K G P+A N+++
Sbjct: 295 FLQMLRQGFEPTHFTYSSVFTACASSGSLEQGKWVHAHVIKSG----GQPIAYIGNTLID 350
Query: 174 MYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVV 233
MYAK G + +A+ +F + + IVSW +II GY G EA L QM + V P+ +
Sbjct: 351 MYAKSGSIKDAKKVFRRLVKQDIVSWNSIISGYAQHGLGAEALQLFEQMLKAKVQPNEIT 410
Query: 234 FLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAV- 292
FL+++ C+ G L L+ K + +V + + G L A + + +
Sbjct: 411 FLSVLTACSHSGLLDEGQYYFELMKKHKIEAQVAHHVTVVDLLGRAGRLNEANKFIEEMP 470
Query: 293 LEKSVFLWTSMIG 305
++ + +W +++G
Sbjct: 471 IKPTAAVWGALLG 483
>gi|147820082|emb|CAN67135.1| hypothetical protein VITISV_005195 [Vitis vinifera]
Length = 800
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 190/628 (30%), Positives = 332/628 (52%), Gaps = 33/628 (5%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI N G+FE L SM + G + ++F +LK A + + G++VHS ++K+G
Sbjct: 71 MIAGXVNFGNFETALEFLKSMKRYGFAVDGYSFGSILKGVACVGYVEVGQQVHSMIVKIG 130
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
++ + F + L+DMY+KC + +V + +R+ V+WN++IS ++ A +
Sbjct: 131 YEGNVFAGSALLDMYAKCERVEDAFEVFK--SINIRNSVTWNALISGYAHVGDRGTAFWL 188
Query: 121 LKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
L M + G+E+ TF +++ + +H + K GL ++ + N++++ Y+
Sbjct: 189 LDCMELEGVEIDDGTFAPLLTLLDDPDLHKLTTQVHAKIVKHGLASD-TTVCNAIITAYS 247
Query: 177 KFGKVNEARSIFDEIGET-SIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFL 235
+ G + +A +FD ET +V+W +++ Y+ EAF L +M+ + PD+ +
Sbjct: 248 ECGSIEDAERVFDGAIETRDLVTWNSMLAAYLVNNQEEEAFELFLEMQVLGFEPDIYTYT 307
Query: 236 NLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKC--GDLELARRVFDAVL 293
++I + + S+H L++K G P+ N L++MY K ++ A +F+++
Sbjct: 308 SVISAAFEXAHQGQGKSLHGLVIKRGLEFLVPISNSLIAMYLKSHSKSMDEALNIFESLE 367
Query: 294 EKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKE 353
K W S++ G++Q G +A+ F+ + V + + L +C++L +L G++
Sbjct: 368 NKDHVSWNSILTGFSQSGLSEDALKFFENMRSQYVVIDHYAFSAVLRSCSDLATLQLGQQ 427
Query: 354 IEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGM 413
+ H+ CG I A++ F+ P W+++I GYA HG
Sbjct: 428 V--------------------HVL--CGVIEDARKSFDATPKDSSIAWNSLIFGYAQHGR 465
Query: 414 GDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHY 473
G AL+LF+ M+ +K D + + ++L+ACSH G+V++G SF KSM+S++GI P +EHY
Sbjct: 466 GKIALDLFFLMKD-RRVKLDHITFVAVLTACSHIGLVEEGWSFLKSMESDYGIPPRMEHY 524
Query: 474 LCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNP 533
C++DLLGRAGR D A I MP E A VW LL AC ++EL A +LL L P
Sbjct: 525 ACMIDLLGRAGRLDEAKALIEAMPFEPDAMVWKTLLGACRTCGDIELASQVASHLLELEP 584
Query: 534 GSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHH 593
Y+L++++F W E A+ + LM +R + K PGWS +E+ V F A DRSH
Sbjct: 585 EEHCTYVLLSSMFGHLRRWNEKASIKRLMKERGVKKVPGWSWIEVKNEVHSFNAEDRSHP 644
Query: 594 LSVDIRKTLKELHIKLLEAGYIAEADIV 621
+I L +L ++ Y+A ++I+
Sbjct: 645 NCEEIYLRLGDLMEEIRRLDYVANSEIM 672
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 134/547 (24%), Positives = 243/547 (44%), Gaps = 34/547 (6%)
Query: 34 PLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPV 93
PL + ++ +++ H +K G + +I Y+KC + + K+ DE
Sbjct: 3 PLHSLSQSSFTALYRASVNHCLAIKSGTTASIYTANNIISGYAKCGEIRIASKMFDE--T 60
Query: 94 RLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCS----FRQGI 149
R VSWN++I+ + A+ LK M G + +F S++ G + G
Sbjct: 61 SQRDAVSWNTMIAGXVNFGNFETALEFLKSMKRYGFAVDGYSFGSILKGVACVGYVEVGQ 120
Query: 150 SMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNV 209
+H + K+G N + ++++ MYAK +V +A +F I + V+W +I GY +V
Sbjct: 121 QVHSMIVKIGYEGN-VFAGSALLDMYAKCERVEDAFEVFKSINIRNSVTWNALISGYAHV 179
Query: 210 GNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLD 269
G+ AF L + M V D F L+ L +H+ ++K G ++ +
Sbjct: 180 GDRGTAFWLLDCMELEGVEIDDGTFAPLLTLLDDPDLHKLTTQVHAKIVKHGLASDTTVC 239
Query: 270 NLLVSMYTKCGDLELARRVFDAVLE-KSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSV 328
N +++ Y++CG +E A RVFD +E + + W SM+ Y EA LF +
Sbjct: 240 NAIITAYSECGSIEDAERVFDGAIETRDLVTWNSMLAAYLVNNQEEEAFELFLEMQVLGF 299
Query: 329 RPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMF--SKCGRINKA 386
P+ T + +SA E +GK + ++ GLE + SLI M+ S +++A
Sbjct: 300 EPDIYTYTSVISAAFEXAHQGQGKSLHGLVIKRGLEFLVPISNSLIAMYLKSHSKSMDEA 359
Query: 387 KEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSH 446
+FE + +KD W++++ G++ G+ + AL F M+ + + D ++++L +CS
Sbjct: 360 LNIFESLENKDHVSWNSILTGFSQSGLSEDALKFFENMRS-QYVVIDHYAFSAVLRSCSD 418
Query: 447 -------------SGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTI 493
G+++D F + + I + L+ + GR +AL
Sbjct: 419 LATLQLGQQVHVLCGVIEDARKSFDATPKDSSIA-----WNSLIFGYAQHGRGKIALDLF 473
Query: 494 HEMP---VEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLN--PGSTGNYILMANLFTS 548
M V++ + +L+AC VE G K++ + P +Y M +L
Sbjct: 474 FLMKDRRVKLDHITFVAVLTACSHIGLVEEGWSFLKSMESDYGIPPRMEHYACMIDLLGR 533
Query: 549 AGMWKEA 555
AG EA
Sbjct: 534 AGRLDEA 540
>gi|225425015|ref|XP_002267613.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930 [Vitis vinifera]
gi|297738214|emb|CBI27415.3| unnamed protein product [Vitis vinifera]
Length = 743
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 194/647 (29%), Positives = 326/647 (50%), Gaps = 67/647 (10%)
Query: 36 VLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMP--- 92
+LK C + K++H +LK Q + F+ LI Y K + + V D +P
Sbjct: 11 LLKLCCESQNQTQAKKLHCLILKTIKQPETFLSNNLITAYYKLGNLAYAHHVFDHIPQPN 70
Query: 93 --------------------------VRLRSVVSWNSIISAHSRACLNDEAILVLKEMWV 126
+ R VSWN IS ++ +A+ V K M
Sbjct: 71 LFSWNTILSVYSKLGLLSQMQQIFNLMPFRDGVSWNLAISGYANYGSCSDAVRVYKLMLK 130
Query: 127 -LGLELSASTFVSVVSGCS-FR---QGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKV 181
+ L+ TF +++ CS FR G ++ + K G +++ + + ++ MY K G +
Sbjct: 131 DAAMNLNRITFSTMLILCSKFRCVDLGRQINGQILKFGF-GSDVFVGSPLVDMYTKLGLI 189
Query: 182 NEARSIFDEIGETSIV-------------------------------SWTTIIGGYVNVG 210
+A+ FDE+ E ++V SWT +I G + G
Sbjct: 190 YDAKRYFDEMPERNVVMCNTMITGLMRCGMIEESQRLFCGLKERDSISWTIMITGLMQNG 249
Query: 211 NVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDN 270
EA + +MR D F +++ C + L +H+ ++++ + + + +
Sbjct: 250 LEREALDMFREMRLAGFAMDQFTFGSVLTACGSLLALGEGKQIHAYVIRTDHKDNVFVGS 309
Query: 271 LLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRP 330
LV MY+KC ++ A VF + +K+V WT+M+ GY Q G+ EAV +F + + V P
Sbjct: 310 ALVDMYSKCRSIKSAETVFKRMPQKNVISWTAMLVGYGQNGFSEEAVKIFFEMQRNGVEP 369
Query: 331 NEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVF 390
++ TL + +S+CA L SL +G + +++GL S V +LI ++ KCG + +F
Sbjct: 370 DDFTLGSVISSCANLASLEEGAQFHCRALVSGLISFITVSNALITLYGKCGSTENSHRLF 429
Query: 391 ERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMV 450
+ +D W+A++ GYA G ++ + LF +M GLKPD V + +LSACS +G+V
Sbjct: 430 TEMNIRDEVSWTALLAGYAQFGKANETIGLFERML-AHGLKPDGVTFIGVLSACSRAGLV 488
Query: 451 DDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLS 510
+ GL +F+SM GI P ++H C++DLLGRAGR + A I+ MP WA LLS
Sbjct: 489 EKGLQYFESMIKEHGIMPIVDHCTCIIDLLGRAGRLEEARNFINNMPCHPDVVGWATLLS 548
Query: 511 ACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKE 570
+C H ++E+G++AA +L+ L P + +Y+L+++L+ S G W + A R M D+R+ KE
Sbjct: 549 SCRVHGDMEIGKWAADSLIALEPQNPASYVLLSSLYASKGKWDKVAQLRRGMRDKRVRKE 608
Query: 571 PGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKELHIKLLEAGYIAE 617
PG+S ++ G V VF A D+S I L++L+ K++E GY+ +
Sbjct: 609 PGYSWIKYKGKVHVFSADDQSSPFLGQIYAELEKLNYKMIEEGYVPD 655
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 118/447 (26%), Positives = 214/447 (47%), Gaps = 37/447 (8%)
Query: 2 IRNSTNNGSFEETLSTYSSMLQ-TGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
I N GS + + Y ML+ ++ N TF +L C+ + G++++ +LK G
Sbjct: 109 ISGYANYGSCSDAVRVYKLMLKDAAMNLNRITFSTMLILCSKFRCVDLGRQINGQILKFG 168
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVR-------------------------- 94
F D FV + L+DMY+K +++ DEMP R
Sbjct: 169 FGSDVFVGSPLVDMYTKLGLIYDAKRYFDEMPERNVVMCNTMITGLMRCGMIEESQRLFC 228
Query: 95 ---LRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGC----SFRQ 147
R +SW +I+ + L EA+ + +EM + G + TF SV++ C + +
Sbjct: 229 GLKERDSISWTIMITGLMQNGLEREALDMFREMRLAGFAMDQFTFGSVLTACGSLLALGE 288
Query: 148 GISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYV 207
G +H V + +N + + ++++ MY+K + A ++F + + +++SWT ++ GY
Sbjct: 289 GKQIHAYVIRTDHKDN-VFVGSALVDMYSKCRSIKSAETVFKRMPQKNVISWTAMLVGYG 347
Query: 208 NVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDP 267
G EA + +M+R V PD ++I CA + +L H L SG +
Sbjct: 348 QNGFSEEAVKIFFEMQRNGVEPDDFTLGSVISSCANLASLEEGAQFHCRALVSGLISFIT 407
Query: 268 LDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTS 327
+ N L+++Y KCG E + R+F + + WT+++ GYAQ G +E + LF+R+L
Sbjct: 408 VSNALITLYGKCGSTENSHRLFTEMNIRDEVSWTALLAGYAQFGKANETIGLFERMLAHG 467
Query: 328 VRPNEATLATTLSACAELGSLSKG-KEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKA 386
++P+ T LSAC+ G + KG + E I +G+ T +I + + GR+ +A
Sbjct: 468 LKPDGVTFIGVLSACSRAGLVEKGLQYFESMIKEHGIMPIVDHCTCIIDLLGRAGRLEEA 527
Query: 387 KEVFERVP-DKDLAVWSAMINGYAIHG 412
+ +P D+ W+ +++ +HG
Sbjct: 528 RNFINNMPCHPDVVGWATLLSSCRVHG 554
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 77/249 (30%), Positives = 131/249 (52%), Gaps = 7/249 (2%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI NG E L + M G + FTF VL AC ++ ++ +GK++H++V++
Sbjct: 241 MITGLMQNGLEREALDMFREMRLAGFAMDQFTFGSVLTACGSLLALGEGKQIHAYVIRTD 300
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+ + FV + L+DMYSKC S+ V MP ++V+SW +++ + + ++EA+ +
Sbjct: 301 HKDNVFVGSALVDMYSKCRSIKSAETVFKRMPQ--KNVISWTAMLVGYGQNGFSEEAVKI 358
Query: 121 LKEMWVLGLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
EM G+E T SV+S C S +G HC GL++ I ++N+++++Y
Sbjct: 359 FFEMQRNGVEPDDFTLGSVISSCANLASLEEGAQFHCRALVSGLISF-ITVSNALITLYG 417
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K G + +F E+ VSWT ++ GY G NE GL +M + PD V F+
Sbjct: 418 KCGSTENSHRLFTEMNIRDEVSWTALLAGYAQFGKANETIGLFERMLAHGLKPDGVTFIG 477
Query: 237 LILGCAQVG 245
++ C++ G
Sbjct: 478 VLSACSRAG 486
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 69/261 (26%), Positives = 125/261 (47%), Gaps = 39/261 (14%)
Query: 234 FLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVL 293
+ +L+ C + N A +H L+LK+ E L N L++ Y K G+L A VFD +
Sbjct: 8 YASLLKLCCESQNQTQAKKLHCLILKTIKQPETFLSNNLITAYYKLGNLAYAHHVFDHIP 67
Query: 294 EKSVFLWTSM-------------------------------IGGYAQLGYPSEAVNLFKR 322
+ ++F W ++ I GYA G S+AV ++K
Sbjct: 68 QPNLFSWNTILSVYSKLGLLSQMQQIFNLMPFRDGVSWNLAISGYANYGSCSDAVRVYKL 127
Query: 323 LLK-TSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCG 381
+LK ++ N T +T L C++ + G++I I+ G S+ V + L+ M++K G
Sbjct: 128 MLKDAAMNLNRITFSTMLILCSKFRCVDLGRQINGQILKFGFGSDVFVGSPLVDMYTKLG 187
Query: 382 RINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKP-DAVVYTSI 440
I AK F+ +P++++ + + MI G GM +++ LF GLK D++ +T +
Sbjct: 188 LIYDAKRYFDEMPERNVVMCNTMITGLMRCGMIEESQRLFC------GLKERDSISWTIM 241
Query: 441 LSACSHSGMVDDGLSFFKSMQ 461
++ +G+ + L F+ M+
Sbjct: 242 ITGLMQNGLEREALDMFREMR 262
>gi|224091821|ref|XP_002309359.1| predicted protein [Populus trichocarpa]
gi|222855335|gb|EEE92882.1| predicted protein [Populus trichocarpa]
Length = 605
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 180/517 (34%), Positives = 288/517 (55%), Gaps = 10/517 (1%)
Query: 111 ACLNDEAILVLKEMWVLG--LELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNE 164
+C D +I V +M VLG +T ++V+ + + G+ + C K G ++
Sbjct: 9 SCFED-SIRVFGDM-VLGNGPRFDLTTVIAVLPAVAELQELKLGMQILCLAIKCGFYSH- 65
Query: 165 IPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRR 224
+ L ++S+++K G+V AR +F EI + ++S +I G+ G ++ L ++
Sbjct: 66 VSLLTGLISLFSKCGEVEIARLLFGEIRKKDLISCNAMISGFTCNGETEDSVRLFKELLS 125
Query: 225 MSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLEL 284
+ LI + G+ +L +H +K G + + L ++Y + ++
Sbjct: 126 SGERVSSSTIVGLIPVYSPFGHSYLCNCIHGFCVKLGIVSHSSVSTALTTVYCRLNEMIF 185
Query: 285 ARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAE 344
AR++FD EK++ W +MI G Q G A++LF+ + K +V PN T+ + LSACA+
Sbjct: 186 ARQLFDESAEKTLASWNAMISGCTQNGLTDAAISLFQTMQKNNVNPNPVTVTSILSACAQ 245
Query: 345 LGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAM 404
+G+LS G+ + I N ESN V T+LI M++KCG I A+E+F+ +P+K+ W+AM
Sbjct: 246 IGALSLGEWVHSLIKSNRFESNVYVSTALIDMYAKCGSITVARELFDLMPEKNEVTWNAM 305
Query: 405 INGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNF 464
I+GY +HG G +AL LFY M +KP + + S+L ACSH+G+V +G F +M +F
Sbjct: 306 ISGYGLHGHGQEALKLFYDMLS-SSVKPTGLTFLSVLYACSHAGLVKEGDGIFHTMVHDF 364
Query: 465 GIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYA 524
G EP EHY C+VD+LGRAG+ AL+ I MPVE VW LL ACM H + L A
Sbjct: 365 GFEPLAEHYACMVDILGRAGQLKKALEFIKAMPVEPGPPVWGALLGACMIHKDTNLAHVA 424
Query: 525 AKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQV 584
++ L L+P + G Y+LM+N+++ + +AA+ R + +RL K PG + +EI V
Sbjct: 425 SEKLFELDPENIGYYVLMSNIYSVERKYPQAASVRQVAKKKRLAKTPGCTLIEIGQVPHV 484
Query: 585 FVAGDRSHHLSVDIRKTLKELHIKLLEAGYIAEADIV 621
F +GD+SH S I L +L K+ EAG+ E V
Sbjct: 485 FTSGDQSHPQSKAIYAELDKLTGKMTEAGFQTETTTV 521
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 119/419 (28%), Positives = 215/419 (51%), Gaps = 12/419 (2%)
Query: 1 MIRNSTNNGSFEETLSTYSSM-LQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKV 59
MI N FE+++ + M L G + T VL A A + + G ++ +K
Sbjct: 1 MISGFVKNSCFEDSIRVFGDMVLGNGPRFDLTTVIAVLPAVAELQELKLGMQILCLAIKC 60
Query: 60 GFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAIL 119
GF + TGLI ++SKC + +R + E +R + ++S N++IS + ++++
Sbjct: 61 GFYSHVSLLTGLISLFSKCGEVEIARLLFGE--IRKKDLISCNAMISGFTCNGETEDSVR 118
Query: 120 VLKEMWVLGLELSASTFVSVVSGCS-FRQGISMHC----CVYKLGLLNNEIPLANSVMSM 174
+ KE+ G +S+ST V ++ S F +C CV KLG++++ ++ ++ ++
Sbjct: 119 LFKELLSSGERVSSSTIVGLIPVYSPFGHSYLCNCIHGFCV-KLGIVSHS-SVSTALTTV 176
Query: 175 YAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVF 234
Y + ++ AR +FDE E ++ SW +I G G + A L M++ +V P+ V
Sbjct: 177 YCRLNEMIFARQLFDESAEKTLASWNAMISGCTQNGLTDAAISLFQTMQKNNVNPNPVTV 236
Query: 235 LNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLE 294
+++ CAQ+G L L +HSL+ + + + + L+ MY KCG + +AR +FD + E
Sbjct: 237 TSILSACAQIGALSLGEWVHSLIKSNRFESNVYVSTALIDMYAKCGSITVARELFDLMPE 296
Query: 295 KSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEI 354
K+ W +MI GY G+ EA+ LF +L +SV+P T + L AC+ G + +G I
Sbjct: 297 KNEVTWNAMISGYGLHGHGQEALKLFYDMLSSSVKPTGLTFLSVLYACSHAGLVKEGDGI 356
Query: 355 EEYIVLN-GLESNRQVQTSLIHMFSKCGRINKAKEVFERVP-DKDLAVWSAMINGYAIH 411
+V + G E + ++ + + G++ KA E + +P + VW A++ IH
Sbjct: 357 FHTMVHDFGFEPLAEHYACMVDILGRAGQLKKALEFIKAMPVEPGPPVWGALLGACMIH 415
>gi|356540333|ref|XP_003538644.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g14820-like [Glycine max]
Length = 721
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 167/548 (30%), Positives = 282/548 (51%), Gaps = 36/548 (6%)
Query: 102 NSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYK 157
N ++ SR + + + + G L +F ++ S G+ +H K
Sbjct: 84 NQLLRQFSRGPTPENTLSLYLHLRRNGFPLDRFSFPPLLKAVSKLSALNLGLEIHGLASK 143
Query: 158 LGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFG 217
G + + + +++++MYA G++ +AR +FD++ +V+W +I GY + +
Sbjct: 144 FGFFHADPFIQSALIAMYAACGRIMDARFLFDKMSHRDVVTWNIMIDGYSQNAHYDHVLK 203
Query: 218 LCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYT 277
L +M+ PD ++ ++ CA GNL ++H + +G+ + LV+MY
Sbjct: 204 LYEEMKTSGTEPDAIILCTVLSACAHAGNLSYGKAIHQFIKDNGFRVGSHIQTSLVNMYA 263
Query: 278 KCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGY------------------------- 312
CG + LAR V+D + K + + T+M+ GYA+LG
Sbjct: 264 NCGAMHLAREVYDQLPSKHMVVSTAMLSGYAKLGMVQDARFIFDRMVEKDLVCWSAMISG 323
Query: 313 ------PSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESN 366
P EA+ LF + + + P++ T+ + +SACA +G+L + K I Y NG
Sbjct: 324 YAESYQPLEALQLFNEMQRRRIVPDQITMLSVISACANVGALVQAKWIHTYADKNGFGRT 383
Query: 367 RQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQH 426
+ +LI M++KCG + KA+EVFE +P K++ WS+MIN +A+HG D A+ LF++M+
Sbjct: 384 LPINNALIDMYAKCGNLVKAREVFENMPRKNVISWSSMINAFAMHGDADSAIALFHRMKE 443
Query: 427 VEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRF 486
+ ++P+ V + +L ACSH+G+V++G FF SM + I P EHY C+VDL RA
Sbjct: 444 -QNIEPNGVTFIGVLYACSHAGLVEEGQKFFSSMINEHRISPQREHYGCMVDLYCRANHL 502
Query: 487 DLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLF 546
A++ I MP +W L+SAC H +ELGE+AA LL L P G ++++N++
Sbjct: 503 RKAMELIETMPFPPNVIIWGSLMSACQNHGEIELGEFAATRLLELEPDHDGALVVLSNIY 562
Query: 547 TSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKELH 606
W + R LM + ++KE S++E++ V VF+ DR H S +I K L +
Sbjct: 563 AKEKRWDDVGLVRKLMKHKGVSKEKACSRIEVNNEVHVFMMADRYHKQSDEIYKKLDAVV 622
Query: 607 IKLLEAGY 614
+L GY
Sbjct: 623 SQLKLVGY 630
Score = 212 bits (539), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 131/449 (29%), Positives = 225/449 (50%), Gaps = 39/449 (8%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
++R + + E TLS Y + + G + F+FP +LKA + ++++ G +H K G
Sbjct: 86 LLRQFSRGPTPENTLSLYLHLRRNGFPLDRFSFPPLLKAVSKLSALNLGLEIHGLASKFG 145
Query: 61 -FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAIL 119
F D F+Q+ LI MY+ C + +R + D+M R VV+WN +I +S+ D +
Sbjct: 146 FFHADPFIQSALIAMYAACGRIMDARFLFDKM--SHRDVVTWNIMIDGYSQNAHYDHVLK 203
Query: 120 VLKEMWVLGLELSASTFVSVVSGCS-------------------FRQG-------ISMH- 152
+ +EM G E A +V+S C+ FR G ++M+
Sbjct: 204 LYEEMKTSGTEPDAIILCTVLSACAHAGNLSYGKAIHQFIKDNGFRVGSHIQTSLVNMYA 263
Query: 153 -CCVYKLG------LLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGG 205
C L L + + ++ +++S YAK G V +AR IFD + E +V W+ +I G
Sbjct: 264 NCGAMHLAREVYDQLPSKHMVVSTAMLSGYAKLGMVQDARFIFDRMVEKDLVCWSAMISG 323
Query: 206 YVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNE 265
Y EA L N+M+R + PD + L++I CA VG L A +H+ K+G+
Sbjct: 324 YAESYQPLEALQLFNEMQRRRIVPDQITMLSVISACANVGALVQAKWIHTYADKNGFGRT 383
Query: 266 DPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLK 325
P++N L+ MY KCG+L AR VF+ + K+V W+SMI +A G A+ LF R+ +
Sbjct: 384 LPINNALIDMYAKCGNLVKAREVFENMPRKNVISWSSMINAFAMHGDADSAIALFHRMKE 443
Query: 326 TSVRPNEATLATTLSACAELGSLSKGKE-IEEYIVLNGLESNRQVQTSLIHMFSKCGRIN 384
++ PN T L AC+ G + +G++ I + + R+ ++ ++ + +
Sbjct: 444 QNIEPNGVTFIGVLYACSHAGLVEEGQKFFSSMINEHRISPQREHYGCMVDLYCRANHLR 503
Query: 385 KAKEVFERVP-DKDLAVWSAMINGYAIHG 412
KA E+ E +P ++ +W ++++ HG
Sbjct: 504 KAMELIETMPFPPNVIIWGSLMSACQNHG 532
>gi|297824009|ref|XP_002879887.1| hypothetical protein ARALYDRAFT_903365 [Arabidopsis lyrata subsp.
lyrata]
gi|297325726|gb|EFH56146.1| hypothetical protein ARALYDRAFT_903365 [Arabidopsis lyrata subsp.
lyrata]
Length = 1359
Score = 322 bits (826), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 192/600 (32%), Positives = 320/600 (53%), Gaps = 10/600 (1%)
Query: 12 EETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGL 71
E +L Y V S +F L AC+ + G+++H V+K+G D +V T L
Sbjct: 753 ESSLELYMLAKSNSVKLVSTSFTGALGACSQSENSAFGRQIHCDVVKMGLDNDPYVSTSL 812
Query: 72 IDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLEL 131
+ MYSKC + V V + + WN++++A+ A+ + M +
Sbjct: 813 LSMYSKCGMVGEAETVFS--CVVDKRLEIWNAMVAAYVENDNGYSALELFGFMRQKSVLP 870
Query: 132 SASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSI 187
+ T +V+S CS + G S+H ++K + + + ++++++Y+K G +A +
Sbjct: 871 DSFTLSNVISCCSMFGLYDYGKSVHAELFKRPIQSTP-AIESALLTLYSKCGCDTDAYLV 929
Query: 188 FDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRM--SVTPDLVVFLNLILGCAQVG 245
F + E +V+W ++I G G EA + M+ S+ PD + ++I CA +
Sbjct: 930 FKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVINACAGLE 989
Query: 246 NLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIG 305
L L +H ++K+G + + L+ +Y+KCG E+A +VF ++ +++ W SMI
Sbjct: 990 ALSFGLQVHGSMIKTGQVLNVFVGSSLIDLYSKCGLPEMALKVFTSMRPENIVAWNSMIS 1049
Query: 306 GYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLES 365
Y++ P ++ LF +L + P+ ++ + L A + SL KGK + Y + G+ S
Sbjct: 1050 CYSRNNLPELSIELFNLMLSQGIFPDSVSITSVLVAISSTASLLKGKSLHGYTLRLGIPS 1109
Query: 366 NRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQ 425
+ ++ +LI M+ KCG A+ +F+++ K L W+ MI GY HG AL+LF +++
Sbjct: 1110 DTHLKNALIDMYVKCGFSKYAENIFKKMQHKSLITWNLMIYGYGSHGDCRTALSLFDELK 1169
Query: 426 HVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGR 485
G PD V + S++SAC+HSG V++G +FF+ M+ ++GIEP +EHY +VDLLGRAGR
Sbjct: 1170 KA-GETPDDVTFLSLISACNHSGFVEEGKNFFEIMKQDYGIEPKMEHYANMVDLLGRAGR 1228
Query: 486 FDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANL 545
+ A I MP E + +W LLSA HHNVELG +A+ LL + P Y+ + NL
Sbjct: 1229 LEEAYSFIKAMPTEADSSIWLCLLSASRTHHNVELGILSAEKLLRMEPERGSTYVQLINL 1288
Query: 546 FTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKEL 605
+ AG+ EAA G M +R L K+PG S +E+ VF +G S + +I K L L
Sbjct: 1289 YMEAGLKNEAAKLLGEMKERGLQKQPGCSWIEVSDISNVFFSGGSSSPIKAEIFKVLNRL 1348
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 151/533 (28%), Positives = 261/533 (48%), Gaps = 24/533 (4%)
Query: 2 IRNSTNNGSFEETLSTY-----SSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHV 56
IR G + + L Y SS L T V FTFP +LKAC+++ ++ GK +H +
Sbjct: 532 IRALIQKGEYLQALHLYTKHDGSSPLWTSV----FTFPSLLKACSSLTNLSSGKTIHGSI 587
Query: 57 LKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLD---EMPVRLRSVVSWNSIISAHSRACL 113
+ +G++ D F+ T L++MY KC + +V D + V R V NS+I + +
Sbjct: 588 IVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGWSQSGVSARDVTVCNSMIDGYFKFRR 647
Query: 114 NDEAILVLKEMWVLGLELSASTFVSVVSGC----SFRQ--GISMHCCVYKLGLLNNEIPL 167
E + + M VLG+ A + VVS +FR+ G +H + + L+ + L
Sbjct: 648 FKEGVGCFRRMLVLGVRPDAFSLSIVVSVLCKEGNFRREDGKQIHGYMLR-NSLDGDSFL 706
Query: 168 ANSVMSMYAKFGKVNEARSIFDEIGETS-IVSWTTIIGGYVNVGNVNEAFGLCNQMRRMS 226
+++ MY KFG +A +F EI + S +V W +I G+ + L + S
Sbjct: 707 KTALIDMYFKFGLSTDAWRVFVEIEDKSNVVLWNVMIVGFGGSEICESSLELYMLAKSNS 766
Query: 227 VTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELAR 286
V F + C+Q N +H ++K G +N+ + L+SMY+KCG + A
Sbjct: 767 VKLVSTSFTGALGACSQSENSAFGRQIHCDVVKMGLDNDPYVSTSLLSMYSKCGMVGEAE 826
Query: 287 RVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELG 346
VF V++K + +W +M+ Y + A+ LF + + SV P+ TL+ +S C+ G
Sbjct: 827 TVFSCVVDKRLEIWNAMVAAYVENDNGYSALELFGFMRQKSVLPDSFTLSNVISCCSMFG 886
Query: 347 SLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMIN 406
GK + + ++S ++++L+ ++SKCG A VF+ + +KD+ W ++I+
Sbjct: 887 LYDYGKSVHAELFKRPIQSTPAIESALLTLYSKCGCDTDAYLVFKSMEEKDMVAWGSLIS 946
Query: 407 GYAIHGMGDQALNLFYKMQ-HVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFG 465
G +G +AL +F M+ + LKPD+ + TS+++AC+ + GL SM G
Sbjct: 947 GLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVINACAGLEALSFGLQVHGSMIKT-G 1005
Query: 466 IEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNV 518
++ L+DL + G ++ALK M E W ++S C +N+
Sbjct: 1006 QVLNVFVGSSLIDLYSKCGLPEMALKVFTSMRPE-NIVAWNSMIS-CYSRNNL 1056
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 105/419 (25%), Positives = 193/419 (46%), Gaps = 11/419 (2%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
M+ N + L + M Q V +SFT V+ C+ GK VH+ + K
Sbjct: 843 MVAAYVENDNGYSALELFGFMRQKSVLPDSFTLSNVISCCSMFGLYDYGKSVHAELFKRP 902
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
Q +++ L+ +YSKC + V M + +V+W S+IS + EA+ V
Sbjct: 903 IQSTPAIESALLTLYSKCGCDTDAYLVFKSM--EEKDMVAWGSLISGLCKNGKFKEALKV 960
Query: 121 LKEMW--VLGLELSASTFVSVVSGCSFRQ----GISMHCCVYKLGLLNNEIPLANSVMSM 174
+M L+ + SV++ C+ + G+ +H + K G + N + + +S++ +
Sbjct: 961 FGDMKDDDDSLKPDSDIMTSVINACAGLEALSFGLQVHGSMIKTGQVLN-VFVGSSLIDL 1019
Query: 175 YAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVF 234
Y+K G A +F + +IV+W ++I Y + L N M + PD V
Sbjct: 1020 YSKCGLPEMALKVFTSMRPENIVAWNSMISCYSRNNLPELSIELFNLMLSQGIFPDSVSI 1079
Query: 235 LNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLE 294
++++ + +L S+H L+ G ++ L N L+ MY KCG + A +F +
Sbjct: 1080 TSVLVAISSTASLLKGKSLHGYTLRLGIPSDTHLKNALIDMYVKCGFSKYAENIFKKMQH 1139
Query: 295 KSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEI 354
KS+ W MI GY G A++LF L K P++ T + +SAC G + +GK
Sbjct: 1140 KSLITWNLMIYGYGSHGDCRTALSLFDELKKAGETPDDVTFLSLISACNHSGFVEEGKNF 1199
Query: 355 EEYIVLN-GLESNRQVQTSLIHMFSKCGRINKAKEVFERVP-DKDLAVWSAMINGYAIH 411
E + + G+E + +++ + + GR+ +A + +P + D ++W +++ H
Sbjct: 1200 FEIMKQDYGIEPKMEHYANMVDLLGRAGRLEEAYSFIKAMPTEADSSIWLCLLSASRTH 1258
>gi|449442481|ref|XP_004139010.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g04840-like [Cucumis sativus]
gi|449505311|ref|XP_004162432.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g04840-like [Cucumis sativus]
Length = 679
Score = 322 bits (826), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 175/478 (36%), Positives = 265/478 (55%), Gaps = 45/478 (9%)
Query: 148 GISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGET----SIVSWTTII 203
G ++HC + K GL + + S++ MY K ++ A +FDE E+ S++ W +I
Sbjct: 159 GRALHCGILKFGLEFDSF-VRVSLVDMYVKVEELGSALKVFDESPESVKNGSVLIWNVLI 217
Query: 204 GGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYN 263
GY +G++ +A L + M + G+
Sbjct: 218 HGYCRMGDLVKATELFDSMPK-----------------KDTGSW---------------- 244
Query: 264 NEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRL 323
N L++ + K GD+ A+ +F + EK+V WT+M+ G++Q G P +A+ F +
Sbjct: 245 ------NSLINGFMKMGDMGRAKELFVKMPEKNVVSWTTMVNGFSQNGDPEKALETFFCM 298
Query: 324 LKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRI 383
L+ RPN+ T+ + LSACA++G+L G I Y+ NG + N + T+L+ M++KCG I
Sbjct: 299 LEEGARPNDYTIVSALSACAKIGALDAGLRIHNYLSGNGFKLNLVIGTALVDMYAKCGNI 358
Query: 384 NKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSA 443
A++VF +K L +WS MI G+AIHG +AL F M+ G KPD+VV+ ++L+A
Sbjct: 359 EHAEKVFHETKEKGLLIWSVMIWGWAIHGHFRKALQYFEWMK-FTGTKPDSVVFLAVLNA 417
Query: 444 CSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQ 503
CSHSG V++GL FF +M+ + IEPS++HY +VD+LGRAGR D ALK I MP+
Sbjct: 418 CSHSGQVNEGLKFFDNMRRGYLIEPSMKHYTLVVDMLGRAGRLDEALKFIRAMPITPDFV 477
Query: 504 VWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMD 563
VW L AC H NVE+ E A+K LL L P G+Y+ ++N + S G W +A R M
Sbjct: 478 VWGALFCACRTHKNVEMAELASKKLLQLEPKHPGSYVFLSNAYASVGRWDDAERVRVSMR 537
Query: 564 DRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKELHIKLLEAGYIAEADIV 621
D K+PGWS +E+D + FVAGD +H+ +V+I L E+ E GY E + V
Sbjct: 538 DHGAHKDPGWSFIEVDHKLHRFVAGDNTHNRAVEIYSKLDEISASAREKGYTKEIECV 595
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 121/467 (25%), Positives = 219/467 (46%), Gaps = 42/467 (8%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+IR N FE ++S + ML+ + + TFP VLK+ A +++ G+ +H +LK G
Sbjct: 111 LIRGLAENSRFESSISFFVLMLKWKISPDRLTFPFVLKSAAALSNGGVGRALHCGILKFG 170
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMP--VRLRSVVSWNSIISAHSRACLNDEAI 118
+ D+FV+ L+DMY K + S+ KV DE P V+ SV+ WN +I + R
Sbjct: 171 LEFDSFVRVSLVDMYVKVEELGSALKVFDESPESVKNGSVLIWNVLIHGYCR-------- 222
Query: 119 LVLKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKF 178
+G + A+ + + NS+++ + K
Sbjct: 223 --------MGDLVKATELFD--------------------SMPKKDTGSWNSLINGFMKM 254
Query: 179 GKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLI 238
G + A+ +F ++ E ++VSWTT++ G+ G+ +A M P+ ++ +
Sbjct: 255 GDMGRAKELFVKMPEKNVVSWTTMVNGFSQNGDPEKALETFFCMLEEGARPNDYTIVSAL 314
Query: 239 LGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVF 298
CA++G L L +H+ L +G+ + LV MY KCG++E A +VF EK +
Sbjct: 315 SACAKIGALDAGLRIHNYLSGNGFKLNLVIGTALVDMYAKCGNIEHAEKVFHETKEKGLL 374
Query: 299 LWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYI 358
+W+ MI G+A G+ +A+ F+ + T +P+ L+AC+ G +++G + + +
Sbjct: 375 IWSVMIWGWAIHGHFRKALQYFEWMKFTGTKPDSVVFLAVLNACSHSGQVNEGLKFFDNM 434
Query: 359 VLNGL-ESNRQVQTSLIHMFSKCGRINKAKEVFERVP-DKDLAVWSAMINGYAIHGMGDQ 416
L E + + T ++ M + GR+++A + +P D VW A+ H +
Sbjct: 435 RRGYLIEPSMKHYTLVVDMLGRAGRLDEALKFIRAMPITPDFVVWGALFCACRTHKNVEM 494
Query: 417 ALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSN 463
A K+ +E P + V+ S +A + G DD SM+ +
Sbjct: 495 AELASKKLLQLEPKHPGSYVFLS--NAYASVGRWDDAERVRVSMRDH 539
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 68/303 (22%), Positives = 118/303 (38%), Gaps = 67/303 (22%)
Query: 272 LVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPN 331
+S + ++ A +F K+ +L+ ++I G A+ +++ F +LK + P+
Sbjct: 80 FISSCSSLNSVDYAISIFQRFELKNSYLFNALIRGLAENSRFESSISFFVLMLKWKISPD 139
Query: 332 EATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKC----------- 380
T L + A L + G+ + I+ GLE + V+ SL+ M+ K
Sbjct: 140 RLTFPFVLKSAAALSNGGVGRALHCGILKFGLEFDSFVRVSLVDMYVKVEELGSALKVFD 199
Query: 381 ------------------------GRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQ 416
G + KA E+F+ +P KD W+++ING+ G +
Sbjct: 200 ESPESVKNGSVLIWNVLIHGYCRMGDLVKATELFDSMPKKDTGSWNSLINGFMKMGDMGR 259
Query: 417 ALNLFYKMQHV------------------------------EGLKPDAVVYTSILSACSH 446
A LF KM EG +P+ S LSAC+
Sbjct: 260 AKELFVKMPEKNVVSWTTMVNGFSQNGDPEKALETFFCMLEEGARPNDYTIVSALSACAK 319
Query: 447 SGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWA 506
G +D GL + N G + ++ LVD+ + G + A K HE E +W+
Sbjct: 320 IGALDAGLRIHNYLSGN-GFKLNLVIGTALVDMYAKCGNIEHAEKVFHETK-EKGLLIWS 377
Query: 507 PLL 509
++
Sbjct: 378 VMI 380
>gi|356526928|ref|XP_003532067.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49710-like [Glycine max]
Length = 722
Score = 322 bits (826), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 185/562 (32%), Positives = 311/562 (55%), Gaps = 12/562 (2%)
Query: 64 DAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKE 123
+ F LI+ Y+K S +R+V DE+P +VS+N++I+A++ + + +E
Sbjct: 74 NVFSYNTLINAYAKHSLIHIARRVFDEIP--QPDIVSYNTLIAAYADRGECGPTLRLFEE 131
Query: 124 MWVLGLELSASTFVSVVSGCSFRQGI--SMHCCVYKLGLLNNEIPLANSVMSMYAKFGKV 181
+ L L L T V++ C G+ +HC V G + + N+V++ Y++ G +
Sbjct: 132 VRELRLGLDGFTLSGVITACGDDVGLVRQLHCFVVVCGH-DCYASVNNAVLACYSRKGFL 190
Query: 182 NEARSIFDEIGE---TSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLI 238
+EAR +F E+GE VSW +I EA GL +M R + D+ +++
Sbjct: 191 SEARRVFREMGEGGGRDEVSWNAMIVACGQHREGMEAVGLFREMVRRGLKVDMFTMASVL 250
Query: 239 LGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKC-GDLELARRVFDAVLEKSV 297
V +L H +++KSG++ + + L+ +Y+KC G + R+VF+ + +
Sbjct: 251 TAFTCVKDLVGGRQFHGMMIKSGFHGNSHVGSGLIDLYSKCAGSMVECRKVFEEITAPDL 310
Query: 298 FLWTSMIGGYAQLGYPSE-AVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEE 356
LW +MI G++ SE + F+ + + RP++ + SAC+ L S S GK++
Sbjct: 311 VLWNTMISGFSLYEDLSEDGLWCFREMQRNGFRPDDCSFVCVTSACSNLSSPSLGKQVHA 370
Query: 357 YIVLNGLESNR-QVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGD 415
+ + + NR V +L+ M+SKCG ++ A+ VF+ +P+ + ++MI GYA HG+
Sbjct: 371 LAIKSDVPYNRVSVNNALVAMYSKCGNVHDARRVFDTMPEHNTVSLNSMIAGYAQHGVEV 430
Query: 416 QALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLC 475
++L LF M + + P+++ + ++LSAC H+G V++G +F M+ F IEP EHY C
Sbjct: 431 ESLRLFELMLE-KDIAPNSITFIAVLSACVHTGKVEEGQKYFNMMKERFCIEPEAEHYSC 489
Query: 476 LVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGS 535
++DLLGRAG+ A + I MP + WA LL AC KH NVEL AA L L P +
Sbjct: 490 MIDLLGRAGKLKEAERIIETMPFNPGSIEWATLLGACRKHGNVELAVKAANEFLRLEPYN 549
Query: 536 TGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLS 595
Y++++N++ SA W+EAAT + LM +R + K+PG S +EID V VFVA D SH +
Sbjct: 550 AAPYVMLSNMYASAARWEEAATVKRLMRERGVKKKPGCSWIEIDKKVHVFVAEDTSHPMI 609
Query: 596 VDIRKTLKELHIKLLEAGYIAE 617
+I + ++ K+ +AGY+ +
Sbjct: 610 KEIHVYMGKMLKKMKQAGYVPD 631
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 117/442 (26%), Positives = 215/442 (48%), Gaps = 24/442 (5%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+I + G TL + + + + + FT V+ AC + + +++H V+ G
Sbjct: 112 LIAAYADRGECGPTLRLFEEVRELRLGLDGFTLSGVITACGD--DVGLVRQLHCFVVVCG 169
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEM-PVRLRSVVSWNSIISAHSRACLNDEAIL 119
A V ++ YS+ +R+V EM R VSWN++I A + EA+
Sbjct: 170 HDCYASVNNAVLACYSRKGFLSEARRVFREMGEGGGRDEVSWNAMIVACGQHREGMEAVG 229
Query: 120 VLKEMWVLGLELSASTFVSVVSGCSFRQ----GISMHCCVYKLGLLNNEIPLANSVMSMY 175
+ +EM GL++ T SV++ + + G H + K G N + + ++ +Y
Sbjct: 230 LFREMVRRGLKVDMFTMASVLTAFTCVKDLVGGRQFHGMMIKSGFHGNS-HVGSGLIDLY 288
Query: 176 AKF-GKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLC-NQMRRMSVTPDLVV 233
+K G + E R +F+EI +V W T+I G+ +++E C +M+R PD
Sbjct: 289 SKCAGSMVECRKVFEEITAPDLVLWNTMISGFSLYEDLSEDGLWCFREMQRNGFRPDDCS 348
Query: 234 FLNLILGCAQVGNLFLALSMHSLLLKSGYN-NEDPLDNLLVSMYTKCGDLELARRVFDAV 292
F+ + C+ + + L +H+L +KS N ++N LV+MY+KCG++ ARRVFD +
Sbjct: 349 FVCVTSACSNLSSPSLGKQVHALAIKSDVPYNRVSVNNALVAMYSKCGNVHDARRVFDTM 408
Query: 293 LEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGK 352
E + SMI GYAQ G E++ LF+ +L+ + PN T LSAC G + +G+
Sbjct: 409 PEHNTVSLNSMIAGYAQHGVEVESLRLFELMLEKDIAPNSITFIAVLSACVHTGKVEEGQ 468
Query: 353 EI-----EEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAV-WSAMIN 406
+ E + + E + + +I + + G++ +A+ + E +P ++ W+ ++
Sbjct: 469 KYFNMMKERFCI----EPEAEHYSCMIDLLGRAGKLKEAERIIETMPFNPGSIEWATLLG 524
Query: 407 GYAIHG---MGDQALNLFYKMQ 425
HG + +A N F +++
Sbjct: 525 ACRKHGNVELAVKAANEFLRLE 546
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 82/355 (23%), Positives = 161/355 (45%), Gaps = 44/355 (12%)
Query: 131 LSASTFVSVVSGCSFRQ----GISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARS 186
L TF +++ C ++ G +H +K L+ L+N +Y+K G ++ A++
Sbjct: 7 LQLQTFRNLLKACIAQRDLITGKILHALYFK-SLIPPSTYLSNHFTLLYSKCGSLHNAQT 65
Query: 187 IFDEIGETSIVSWTT-------------------------------IIGGYVNVGNVNEA 215
F ++ S+ T +I Y + G
Sbjct: 66 SFHLTQYPNVFSYNTLINAYAKHSLIHIARRVFDEIPQPDIVSYNTLIAAYADRGECGPT 125
Query: 216 FGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSM 275
L ++R + + D +I C ++ L +H ++ G++ ++N +++
Sbjct: 126 LRLFEEVRELRLGLDGFTLSGVITACGD--DVGLVRQLHCFVVVCGHDCYASVNNAVLAC 183
Query: 276 YTKCGDLELARRVFDAVLE---KSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNE 332
Y++ G L ARRVF + E + W +MI Q EAV LF+ +++ ++ +
Sbjct: 184 YSRKGFLSEARRVFREMGEGGGRDEVSWNAMIVACGQHREGMEAVGLFREMVRRGLKVDM 243
Query: 333 ATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKC-GRINKAKEVFE 391
T+A+ L+A + L G++ ++ +G N V + LI ++SKC G + + ++VFE
Sbjct: 244 FTMASVLTAFTCVKDLVGGRQFHGMMIKSGFHGNSHVGSGLIDLYSKCAGSMVECRKVFE 303
Query: 392 RVPDKDLAVWSAMINGYAIH-GMGDQALNLFYKMQHVEGLKPDAVVYTSILSACS 445
+ DL +W+ MI+G++++ + + L F +MQ G +PD + + SACS
Sbjct: 304 EITAPDLVLWNTMISGFSLYEDLSEDGLWCFREMQR-NGFRPDDCSFVCVTSACS 357
>gi|297804786|ref|XP_002870277.1| hypothetical protein ARALYDRAFT_493409 [Arabidopsis lyrata subsp.
lyrata]
gi|297316113|gb|EFH46536.1| hypothetical protein ARALYDRAFT_493409 [Arabidopsis lyrata subsp.
lyrata]
Length = 684
Score = 322 bits (826), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 196/586 (33%), Positives = 309/586 (52%), Gaps = 9/586 (1%)
Query: 35 LVLKACANINSIWDGKRVHSHVLK-VGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPV 93
L+LK + +S+ G+ VH+ ++K + F+ LI+MYSK S+R VL P
Sbjct: 11 LLLKNAISTSSMRLGRVVHARIVKTLDSPPPPFLANYLINMYSKLDHPESARLVLRLTPA 70
Query: 94 RLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSG-CSFR---QGI 149
R +VVSW S++S ++ A+ EM G+ + TF V S R G
Sbjct: 71 R--NVVSWTSLVSGLAQNGHFSTALFEFFEMRREGVAPNDFTFPCVFKAVASLRLPVTGK 128
Query: 150 SMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNV 209
+H K G + ++ + S MY K ++AR +FDEI E ++ +W I V
Sbjct: 129 QIHALAVKCGRIL-DVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAYISNSVTD 187
Query: 210 GNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLD 269
G EA + RR+ P+ + F + C+ L L + MH L+ +SG++ + +
Sbjct: 188 GRPKEAIEAFIEFRRIGGQPNSITFCGFLNACSDGLLLDLGMQMHGLVFRSGFDTDVSVY 247
Query: 270 NLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVR 329
N L+ Y KC + + +F + K+ W S++ Y Q +A L+ R K V
Sbjct: 248 NGLIDFYGKCKQIRSSEIIFAEMGMKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKEIVE 307
Query: 330 PNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEV 389
++ +++ LSACA + L G+ I + V +E N V ++L+ M+ KCG I +++
Sbjct: 308 TSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERNIFVGSALVDMYGKCGCIEDSEQA 367
Query: 390 FERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVE-GLKPDAVVYTSILSACSHSG 448
F+ +P+K+L +++I GYA G D AL LF M G P+ + + S+LSACS +G
Sbjct: 368 FDEMPEKNLVTLNSLIGGYAHQGQVDMALALFEDMAPRGCGPAPNYMTFVSLLSACSRAG 427
Query: 449 MVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPL 508
V++G+ F SM+S +GIEP EHY C+VD+LGRAG + A + I +MP++ VW L
Sbjct: 428 AVENGMKIFDSMKSTYGIEPGAEHYSCIVDMLGRAGMVEQAFEFIKKMPIKPTISVWGAL 487
Query: 509 LSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLT 568
+AC H LG AA+NL L+P +GN++L++N F +AG W EA T R M +
Sbjct: 488 QNACRMHGKPHLGILAAENLFKLDPKDSGNHVLLSNTFAAAGRWAEANTVREEMKGVGIK 547
Query: 569 KEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKELHIKLLEAGY 614
K G+S + + V F A DRSH ++ +I+ L +L K+ AGY
Sbjct: 548 KGAGYSWITVKNQVHAFQAKDRSHKMNKEIQTMLTKLRNKMEAAGY 593
Score = 181 bits (459), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 121/420 (28%), Positives = 207/420 (49%), Gaps = 11/420 (2%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
++ NG F L + M + GV N FTFP V KA A++ GK++H+ +K G
Sbjct: 79 LVSGLAQNGHFSTALFEFFEMRREGVAPNDFTFPCVFKAVASLRLPVTGKQIHALAVKCG 138
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
D FV DMY K +RK+ DE+P R++ +WN+ IS EAI
Sbjct: 139 RILDVFVGCSAFDMYCKTRLRDDARKLFDEIPE--RNLETWNAYISNSVTDGRPKEAIEA 196
Query: 121 LKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
E +G + ++ TF ++ CS G+ MH V++ G + ++ + N ++ Y
Sbjct: 197 FIEFRRIGGQPNSITFCGFLNACSDGLLLDLGMQMHGLVFRSG-FDTDVSVYNGLIDFYG 255
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K ++ + IF E+G + VSW +++ YV +A L + R+ V + +
Sbjct: 256 KCKQIRSSEIIFAEMGMKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKEIVETSDFMISS 315
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
++ CA + L L S+H+ +K+ + + LV MY KCG +E + + FD + EK+
Sbjct: 316 VLSACAGMAGLELGRSIHAHAVKACVERNIFVGSALVDMYGKCGCIEDSEQAFDEMPEKN 375
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSV--RPNEATLATTLSACAELGSLSKGKEI 354
+ S+IGGYA G A+ LF+ + PN T + LSAC+ G++ G +I
Sbjct: 376 LVTLNSLIGGYAHQGQVDMALALFEDMAPRGCGPAPNYMTFVSLLSACSRAGAVENGMKI 435
Query: 355 EEYIVLN-GLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKD-LAVWSAMINGYAIHG 412
+ + G+E + + ++ M + G + +A E +++P K ++VW A+ N +HG
Sbjct: 436 FDSMKSTYGIEPGAEHYSCIVDMLGRAGMVEQAFEFIKKMPIKPTISVWGALQNACRMHG 495
>gi|224124674|ref|XP_002330082.1| predicted protein [Populus trichocarpa]
gi|222871507|gb|EEF08638.1| predicted protein [Populus trichocarpa]
Length = 665
Score = 322 bits (826), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 193/575 (33%), Positives = 306/575 (53%), Gaps = 57/575 (9%)
Query: 50 KRVHSHVLKVGFQQDAFVQTGLIDMYSK--CSDFVSSRKVLDEMPVRLRSVVSWNSIISA 107
K+VH+ L+ G QD +V L+ Y+ S+ + KV + +P +V +N II
Sbjct: 47 KQVHAVALRTGHFQDHYVSGTLVKCYANPHFSNLNFALKVFEYVPNP--NVFVFNIII-- 102
Query: 108 HSRACLND----EAILVLKEMWVLGLELSASTFVSVVSGCSFRQ----GISMHCCVYKLG 159
+ CL + +AI +M + + T+ ++ C+ + G+ +H V K G
Sbjct: 103 --KGCLQNNEPCKAICCYYKMMIAHARPNKFTYPTLFKACTAAEAAEEGVQVHAHVIKQG 160
Query: 160 LLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLC 219
L + ++ + ++ + MY FG+V AR + E G + ++ + +I GY+ G V A L
Sbjct: 161 L-SGDVHIRSAGIQMYGSFGEVEGARRMLGEDGNSDVICFNAMIDGYLKCGEVEAAKELF 219
Query: 220 NQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKC 279
M VG+ N++VS KC
Sbjct: 220 WSMED-----------------KNVGSW----------------------NVMVSGMAKC 240
Query: 280 GDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTL 339
G +E AR +F+ + EK+ W++MI GY + GY EA+ +F + + +RP + L++ L
Sbjct: 241 GMIEEARELFNEMKEKNEISWSAMIDGYIKGGYYKEALEVFNVMQREEIRPRKFVLSSVL 300
Query: 340 SACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLA 399
+ACA LG+L +G+ I Y+ N + + T+L+ M++KCGR++ A +VFE++ K++
Sbjct: 301 AACANLGALDQGRWIHAYVNNNSNSFDAVLGTALVDMYAKCGRLDMAWDVFEKMEKKEVF 360
Query: 400 VWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKS 459
W+AMI G +HG + A+ LF+KMQ + +P+ + +LSAC+HSGMVD+GL F S
Sbjct: 361 TWNAMICGLGMHGRAEDAIELFFKMQK-QKFRPNGITLLGVLSACAHSGMVDEGLRIFNS 419
Query: 460 MQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVE 519
M+ +GIEP +EHY C+VDLLGRAG A + ++ MP+E A VW LL AC KH +VE
Sbjct: 420 MEEVYGIEPGMEHYGCVVDLLGRAGLLGEAEEVMYSMPMEPSAAVWGALLGACRKHGDVE 479
Query: 520 LGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEID 579
LGE K LL L P ++G Y L++N++ AG W + A R LM +R + G S ++ D
Sbjct: 480 LGERVGKILLELEPQNSGRYALLSNIYARAGRWDDVANVRKLMKERGVKTSTGISMIDFD 539
Query: 580 GSVQVFVAGDRSHHLSVDIRKTLKELHIKLLEAGY 614
G V F GD SH +I LK + +L G+
Sbjct: 540 GVVHEFKMGDGSHPQMKNIYLMLKNMIKRLKMEGF 574
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 115/417 (27%), Positives = 195/417 (46%), Gaps = 46/417 (11%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+I+ N + + Y M+ N FT+P + KAC + +G +VH+HV+K G
Sbjct: 101 IIKGCLQNNEPCKAICCYYKMMIAHARPNKFTYPTLFKACTAAEAAEEGVQVHAHVIKQG 160
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
D +++ I MY + +R++L E V+ +N++I + + C EA
Sbjct: 161 LSGDVHIRSAGIQMYGSFGEVEGARRMLGEDGN--SDVICFNAMIDGYLK-CGEVEAA-- 215
Query: 121 LKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGK 180
KE++ + + ++ +VSG AK G
Sbjct: 216 -KELFWSMEDKNVGSWNVMVSG--------------------------------MAKCGM 242
Query: 181 VNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILG 240
+ EAR +F+E+ E + +SW+ +I GY+ G EA + N M+R + P V +++
Sbjct: 243 IEEARELFNEMKEKNEISWSAMIDGYIKGGYYKEALEVFNVMQREEIRPRKFVLSSVLAA 302
Query: 241 CAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLW 300
CA +G L +H+ + + + + L LV MY KCG L++A VF+ + +K VF W
Sbjct: 303 CANLGALDQGRWIHAYVNNNSNSFDAVLGTALVDMYAKCGRLDMAWDVFEKMEKKEVFTW 362
Query: 301 TSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEI----EE 356
+MI G G +A+ LF ++ K RPN TL LSACA G + +G I EE
Sbjct: 363 NAMICGLGMHGRAEDAIELFFKMQKQKFRPNGITLLGVLSACAHSGMVDEGLRIFNSMEE 422
Query: 357 YIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVP-DKDLAVWSAMINGYAIHG 412
+ G+E + ++ + + G + +A+EV +P + AVW A++ HG
Sbjct: 423 ---VYGIEPGMEHYGCVVDLLGRAGLLGEAEEVMYSMPMEPSAAVWGALLGACRKHG 476
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 89/397 (22%), Positives = 166/397 (41%), Gaps = 52/397 (13%)
Query: 130 ELSASTFVSVV---SGCSFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAK--FGKVNEA 184
+LS T + ++ S S +H + G + ++ +++ YA F +N A
Sbjct: 25 QLSQKTILDLLNTKSSTSLHHLKQVHAVALRTGHFQDHY-VSGTLVKCYANPHFSNLNFA 83
Query: 185 RSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQV 244
+F+ + ++ + II G + +A +M P+ + L C
Sbjct: 84 LKVFEYVPNPNVFVFNIIIKGCLQNNEPCKAICCYYKMMIAHARPNKFTYPTLFKACTAA 143
Query: 245 GNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMI 304
+ +H+ ++K G + + + + + MY G++E ARR+ V + +MI
Sbjct: 144 EAAEEGVQVHAHVIKQGLSGDVHIRSAGIQMYGSFGEVEGARRMLGEDGNSDVICFNAMI 203
Query: 305 GGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLE 364
GY + G A LF + +V GS + ++++G+
Sbjct: 204 DGYLKCGEVEAAKELFWSMEDKNV-----------------GSWN--------VMVSGM- 237
Query: 365 SNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKM 424
+KCG I +A+E+F + +K+ WSAMI+GY G +AL +F M
Sbjct: 238 -------------AKCGMIEEARELFNEMKEKNEISWSAMIDGYIKGGYYKEALEVFNVM 284
Query: 425 QHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYL--CLVDLLGR 482
Q E ++P V +S+L+AC++ G +D G + +N S + L LVD+ +
Sbjct: 285 QR-EEIRPRKFVLSSVLAACANLGALDQGRWIHAYVNNN---SNSFDAVLGTALVDMYAK 340
Query: 483 AGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVE 519
GR D+A +M + + W ++ H E
Sbjct: 341 CGRLDMAWDVFEKME-KKEVFTWNAMICGLGMHGRAE 376
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 67/300 (22%), Positives = 125/300 (41%), Gaps = 39/300 (13%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI G ++E L ++ M + + F VL ACAN+ ++ G+ +H++V
Sbjct: 264 MIDGYIKGGYYKEALEVFNVMQREEIRPRKFVLSSVLAACANLGALDQGRWIHAYVNNNS 323
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISA---HSRACLNDEA 117
DA + T L+DMY+KC + V ++M + V +WN++I H RA ++A
Sbjct: 324 NSFDAVLGTALVDMYAKCGRLDMAWDVFEKM--EKKEVFTWNAMICGLGMHGRA---EDA 378
Query: 118 ILVLKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAK 177
I + +M + T + V+S C+ G+++ + + NS+ +Y
Sbjct: 379 IELFFKMQKQKFRPNGITLLGVLSACAHS------------GMVDEGLRIFNSMEEVYGI 426
Query: 178 FGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNL 237
+ + D +G + +G E M M + P V+ L
Sbjct: 427 EPGMEHYGCVVDLLGRAGL------------LGEAEEV------MYSMPMEPSAAVWGAL 468
Query: 238 ILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSV 297
+ C + G++ L + +LL+ N LL ++Y + G + V + E+ V
Sbjct: 469 LGACRKHGDVELGERVGKILLELEPQNSGRY-ALLSNIYARAGRWDDVANVRKLMKERGV 527
>gi|449439555|ref|XP_004137551.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Cucumis sativus]
Length = 776
Score = 322 bits (826), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 198/640 (30%), Positives = 321/640 (50%), Gaps = 81/640 (12%)
Query: 40 CANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVV 99
C + S+++G R S V +I Y + F +RKV ++MP R ++
Sbjct: 76 CESALSVFNGMRRRSTV----------TYNAMISGYLSNNKFDCARKVFEKMPDR--DLI 123
Query: 100 SWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLG 159
SWN ++S + + A + +M E ++ +++SG + + ++
Sbjct: 124 SWNVMLSGYVKNGNLSAARALFNQM----PEKDVVSWNAMLSGFAQNGFVEEARKIFDQM 179
Query: 160 LLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLC 219
L+ NEI N ++S Y + G++ +AR +FD + IVSW ++GGYV +++A L
Sbjct: 180 LVKNEISW-NGLLSAYVQNGRIEDARRLFDSKMDWEIVSWNCLMGGYVRKKRLDDARSLF 238
Query: 220 NQMRRMSVTPDLVVFLNLILGCAQVG------NLFLALSMHSLL----LKSGYNNEDPLD 269
++M D + + +I G AQ G LF L + + + SG+ LD
Sbjct: 239 DRM----PVRDKISWNIMITGYAQNGLLSEARRLFEELPIRDVFAWTAMVSGFVQNGMLD 294
Query: 270 ------------------------------------------------NLLVSMYTKCGD 281
N +V+ Y +CG+
Sbjct: 295 EATRIFEEMPEKNEVSWNAMIAGYVQSQQIEKARELFDQMPSRNTSSWNTMVTGYAQCGN 354
Query: 282 LELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSA 341
++ A+ +FD + ++ W +MI GYAQ G EA++LF ++ + N + LA LS+
Sbjct: 355 IDQAKILFDEMPQRDCISWAAMISGYAQSGQSEEALHLFIKMKRDGGILNRSALACALSS 414
Query: 342 CAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVW 401
CAE+ +L GK++ +V G ++ +L+ M+ KCG I +A +VFE + +KD+ W
Sbjct: 415 CAEIAALELGKQLHGRLVKAGFQTGYIAGNALLAMYGKCGSIEEAFDVFEDITEKDIVSW 474
Query: 402 SAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQ 461
+ MI GYA HG G +AL LF M+ +KPD V +LSACSH+G VD G+ +F SM
Sbjct: 475 NTMIAGYARHGFGKEALALFESMKMT--IKPDDVTLVGVLSACSHTGFVDKGMEYFNSMY 532
Query: 462 SNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELG 521
N+GI + +HY C++DLLGRAGR D AL + MP A W LL A H + ELG
Sbjct: 533 QNYGITANAKHYTCMIDLLGRAGRLDEALNLMKSMPFYPDAATWGALLGASRIHGDTELG 592
Query: 522 EYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGS 581
E AA+ + + P ++G Y+L++NL+ ++G W+E R M D+ + K PG+S VEI
Sbjct: 593 EKAAEKVFEMEPDNSGMYVLLSNLYAASGRWREVREMRSKMRDKGVKKVPGYSWVEIQNK 652
Query: 582 VQVFVAGDRSHHLSVDIRKTLKELHIKLLEAGYIAEADIV 621
+F GD SH + I L+EL ++L + G+++ +V
Sbjct: 653 THIFTVGDCSHPEAERIYAYLEELDLELKKDGFVSSTKLV 692
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 102/445 (22%), Positives = 202/445 (45%), Gaps = 47/445 (10%)
Query: 98 VVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYK 157
+V WN ISA+ R + A+ V M S T+ +++SG V++
Sbjct: 60 IVKWNRKISAYMRKGQCESALSVFNGM----RRRSTVTYNAMISGYLSNNKFDCARKVFE 115
Query: 158 LGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFG 217
+ + ++ N ++S Y K G ++ AR++F+++ E +VSW ++ G+ G V EA
Sbjct: 116 -KMPDRDLISWNVMLSGYVKNGNLSAARALFNQMPEKDVVSWNAMLSGFAQNGFVEEARK 174
Query: 218 LCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSL----------LLKSGYNNEDP 267
+ +QM + + + + L+ Q G + A + L GY +
Sbjct: 175 IFDQM----LVKNEISWNGLLSAYVQNGRIEDARRLFDSKMDWEIVSWNCLMGGYVRKKR 230
Query: 268 LD-----------------NLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQL 310
LD N++++ Y + G L ARR+F+ + + VF WT+M+ G+ Q
Sbjct: 231 LDDARSLFDRMPVRDKISWNIMITGYAQNGLLSEARRLFEELPIRDVFAWTAMVSGFVQN 290
Query: 311 GYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQ 370
G EA +F+ + + NE + ++ + + K +E+ + + N
Sbjct: 291 GMLDEATRIFEEMPE----KNEVSWNAMIAGYVQSQQIEKARELFDQMP----SRNTSSW 342
Query: 371 TSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGL 430
+++ +++CG I++AK +F+ +P +D W+AMI+GYA G ++AL+LF KM+ G+
Sbjct: 343 NTMVTGYAQCGNIDQAKILFDEMPQRDCISWAAMISGYAQSGQSEEALHLFIKMKRDGGI 402
Query: 431 KPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLAL 490
+ + + LS+C+ ++ G + G + L+ + G+ G + A
Sbjct: 403 LNRSALACA-LSSCAEIAALELGKQLHGRL-VKAGFQTGYIAGNALLAMYGKCGSIEEAF 460
Query: 491 KTIHEMPVEVQAQVWAPLLSACMKH 515
++ E W +++ +H
Sbjct: 461 DVFEDI-TEKDIVSWNTMIAGYARH 484
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 90/365 (24%), Positives = 165/365 (45%), Gaps = 75/365 (20%)
Query: 160 LLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTII---------------- 203
+++++I N +S Y + G+ A S+F+ + S V++ +I
Sbjct: 55 IVDSDIVKWNRKISAYMRKGQCESALSVFNGMRRRSTVTYNAMISGYLSNNKFDCARKVF 114
Query: 204 ---------------GGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLF 248
GYV GN++ A L NQM D+V + ++ G AQ G +
Sbjct: 115 EKMPDRDLISWNVMLSGYVKNGNLSAARALFNQM----PEKDVVSWNAMLSGFAQNGFVE 170
Query: 249 LALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYA 308
A + +L NE + LL S Y + G +E ARR+FD+ ++ + W ++GGY
Sbjct: 171 EARKIFDQML---VKNEISWNGLL-SAYVQNGRIEDARRLFDSKMDWEIVSWNCLMGGYV 226
Query: 309 QLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYI---------- 358
+ +A +LF R+ VR ++ + ++ A+ G LS+ + + E +
Sbjct: 227 RKKRLDDARSLFDRM---PVR-DKISWNIMITGYAQNGLLSEARRLFEELPIRDVFAWTA 282
Query: 359 -----VLNGL------------ESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVW 401
V NG+ E N ++I + + +I KA+E+F+++P ++ + W
Sbjct: 283 MVSGFVQNGMLDEATRIFEEMPEKNEVSWNAMIAGYVQSQQIEKARELFDQMPSRNTSSW 342
Query: 402 SAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQ 461
+ M+ GYA G DQA LF +M + D + + +++S + SG ++ L F M+
Sbjct: 343 NTMVTGYAQCGNIDQAKILFDEMP-----QRDCISWAAMISGYAQSGQSEEALHLFIKMK 397
Query: 462 SNFGI 466
+ GI
Sbjct: 398 RDGGI 402
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 74/282 (26%), Positives = 135/282 (47%), Gaps = 29/282 (10%)
Query: 183 EARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMS-VTPDLVV---FLNLI 238
E+++ I ++ IV W I Y+ G A + N MRR S VT + ++ N
Sbjct: 47 ESKNSDSTIVDSDIVKWNRKISAYMRKGQCESALSVFNGMRRRSTVTYNAMISGYLSNNK 106
Query: 239 LGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVF 298
CA+ +F + L+ N+++S Y K G+L AR +F+ + EK V
Sbjct: 107 FDCAR--KVFEKMPDRDLISW----------NVMLSGYVKNGNLSAARALFNQMPEKDVV 154
Query: 299 LWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYI 358
W +M+ G+AQ G+ EA +F ++L NE + LSA + G + + + +
Sbjct: 155 SWNAMLSGFAQNGFVEEARKIFDQMLV----KNEISWNGLLSAYVQNGRIEDARRLFD-- 208
Query: 359 VLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQAL 418
+ ++ L+ + + R++ A+ +F+R+P +D W+ MI GYA +G+ +A
Sbjct: 209 --SKMDWEIVSWNCLMGGYVRKKRLDDARSLFDRMPVRDKISWNIMITGYAQNGLLSEAR 266
Query: 419 NLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSM 460
LF ++ D +T+++S +GM+D+ F+ M
Sbjct: 267 RLFEELP-----IRDVFAWTAMVSGFVQNGMLDEATRIFEEM 303
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 104/244 (42%), Gaps = 34/244 (13%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI +G EE L + M + G N L +CA I ++ GK++H ++K G
Sbjct: 376 MISGYAQSGQSEEALHLFIKMKRDGGILNRSALACALSSCAEIAALELGKQLHGRLVKAG 435
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
FQ L+ MY KC + V ++ + + +VSWN++I+ ++R EA+ +
Sbjct: 436 FQTGYIAGNALLAMYGKCGSIEEAFDVFED--ITEKDIVSWNTMIAGYARHGFGKEALAL 493
Query: 121 LKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGK 180
+ M + ++ T V V+S CS G ++ + N SMY +G
Sbjct: 494 FESM-KMTIKPDDVTLVGVLSACS------------HTGFVDKGMEYFN---SMYQNYGI 537
Query: 181 VNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILG 240
A+ +T +I G ++EA L M+ M PD + +LG
Sbjct: 538 TANAK------------HYTCMIDLLGRAGRLDEALNL---MKSMPFYPDAATW-GALLG 581
Query: 241 CAQV 244
+++
Sbjct: 582 ASRI 585
>gi|242091211|ref|XP_002441438.1| hypothetical protein SORBIDRAFT_09g026705 [Sorghum bicolor]
gi|241946723|gb|EES19868.1| hypothetical protein SORBIDRAFT_09g026705 [Sorghum bicolor]
Length = 771
Score = 322 bits (826), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 190/586 (32%), Positives = 314/586 (53%), Gaps = 10/586 (1%)
Query: 8 NGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFV 67
NG E+ M+++G+ N + V+ AC G VH VLK G +
Sbjct: 191 NGMLEDAKRAVVGMMRSGIPVNVASLVSVVPACGTERDEGFGLSVHGLVLKSGLDSVVNL 250
Query: 68 QTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLND---EAILVLKEM 124
L+DMY K D SS +V + M + ++ VSWNS + + A ++ E V+ E
Sbjct: 251 GNALVDMYGKFGDLESSMRVFNGM--QEKNEVSWNSALGCFAHAGFHEDVLEMFRVMSEH 308
Query: 125 WVLGLELSASTFV-SVVSGCSFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNE 183
V ++ S+ + ++V F G +H + + ++I +ANS+M MYAKFG + +
Sbjct: 309 EVTPGSVTLSSLLPALVDLGYFHLGKEVHGYSIRRAM-ESDIFIANSLMDMYAKFGCLEK 367
Query: 184 ARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQ 243
A +IF+ I ++VSW +I G EAF L +M++ P+ +NL+ C++
Sbjct: 368 ASAIFENIEGRNVVSWNAMIANLAQNGAETEAFSLVIEMQKNGECPNSFTLVNLLPACSR 427
Query: 244 VGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSM 303
V ++ + +H+ + ++ + N L+ +Y KCG L +A+ +FD EK + ++
Sbjct: 428 VASVKMGKQIHAWSIHRSLMSDLFVSNALIDVYAKCGQLSVAQDIFDRS-EKDDVSYNTL 486
Query: 304 IGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGL 363
I GY+Q E+++LF+++ + + + LSACA L + +GKEI +V L
Sbjct: 487 IVGYSQSQCCFESLHLFQQMRSAGIEYDAVSFMGCLSACANLSAFKQGKEIHGVLVRRLL 546
Query: 364 ESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYK 423
++ + SL+ +++K G + A ++F R+ KD+A W+ MI GY +HG D A LF
Sbjct: 547 NTHPFLANSLLDLYTKGGMLATASKIFNRITRKDVASWNTMILGYGMHGQIDVAFELFDL 606
Query: 424 MQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRA 483
M+ +G+ D V Y ++LSACSH G+VD G +F M + I+P HY C+VDLLGRA
Sbjct: 607 MKD-DGVDYDHVSYIAVLSACSHGGLVDRGKKYFSQMIAQ-NIKPQQMHYACMVDLLGRA 664
Query: 484 GRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMA 543
G+ +++ I MP + VW LL +C H ++EL AA++L L P +G Y L+
Sbjct: 665 GQLSESVEIITNMPFPANSDVWGALLGSCRIHGDIELARLAAEHLFELKPEHSGYYTLLR 724
Query: 544 NLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGD 589
N+++ +GMW EA + LM R++ K P +S V+ +Q F+ GD
Sbjct: 725 NMYSESGMWNEANEIKTLMKSRKVQKNPAYSWVQSGNKLQAFLVGD 770
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 137/464 (29%), Positives = 236/464 (50%), Gaps = 22/464 (4%)
Query: 13 ETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIW-----DGKRVHSHVLKVGFQ-QDAF 66
E L Y+ M+++GV + TFP L A A G +H+ L+ G D F
Sbjct: 89 EALRVYNCMVRSGVRPDDRTFPFALHAAAAAVVAEAEHPAKGAELHAAALRRGLLLADVF 148
Query: 67 VQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWV 126
L+ Y+ +R+V DEMP R +VSWNS++SA + ++A + M
Sbjct: 149 AGNTLVTFYAARGRAADARRVFDEMPAR--DIVSWNSLVSALLTNGMLEDAKRAVVGMMR 206
Query: 127 LGLELSASTFVSVVSGCSFRQ----GISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVN 182
G+ ++ ++ VSVV C + G+S+H V K GL ++ + L N+++ MY KFG +
Sbjct: 207 SGIPVNVASLVSVVPACGTERDEGFGLSVHGLVLKSGL-DSVVNLGNALVDMYGKFGDLE 265
Query: 183 EARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCA 242
+ +F+ + E + VSW + +G + + G + + M VTP V +L+
Sbjct: 266 SSMRVFNGMQEKNEVSWNSALGCFAHAGFHEDVLEMFRVMSEHEVTPGSVTLSSLLPALV 325
Query: 243 QVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTS 302
+G L +H ++ ++ + N L+ MY K G LE A +F+ + ++V W +
Sbjct: 326 DLGYFHLGKEVHGYSIRRAMESDIFIANSLMDMYAKFGCLEKASAIFENIEGRNVVSWNA 385
Query: 303 MIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNG 362
MI AQ G +EA +L + K PN TL L AC+ + S+ GK+I + +
Sbjct: 386 MIANLAQNGAETEAFSLVIEMQKNGECPNSFTLVNLLPACSRVASVKMGKQIHAWSIHRS 445
Query: 363 LESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFY 422
L S+ V +LI +++KCG+++ A+++F+R +KD ++ +I GY+ ++L+LF
Sbjct: 446 LMSDLFVSNALIDVYAKCGQLSVAQDIFDR-SEKDDVSYNTLIVGYSQSQCCFESLHLFQ 504
Query: 423 KMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGI 466
+M+ G++ DAV + LSAC++ LS FK + G+
Sbjct: 505 QMRSA-GIEYDAVSFMGCLSACAN-------LSAFKQGKEIHGV 540
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 130/455 (28%), Positives = 224/455 (49%), Gaps = 22/455 (4%)
Query: 50 KRVHSHVLKVGFQQDAFVQTG-LIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAH 108
+R H+ L G + G L+ Y+ D S+R +L P+RLRS WNS+ A
Sbjct: 22 RRAHAASLVSGALTASLPLAGALLLSYAALRDIPSARLILRHHPLRLRSAFLWNSLSRAL 81
Query: 109 SRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCSFR---------QGISMHCCVYKLG 159
+ A L EA+ V M G+ TF + + +G +H + G
Sbjct: 82 ASAGLPSEALRVYNCMVRSGVRPDDRTFPFALHAAAAAVVAEAEHPAKGAELHAAALRRG 141
Query: 160 LLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLC 219
LL ++ N++++ YA G+ +AR +FDE+ IVSW +++ + G + +A
Sbjct: 142 LLLADVFAGNTLVTFYAARGRAADARRVFDEMPARDIVSWNSLVSALLTNGMLEDAKRAV 201
Query: 220 NQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKC 279
M R + ++ ++++ C + LS+H L+LKSG ++ L N LV MY K
Sbjct: 202 VGMMRSGIPVNVASLVSVVPACGTERDEGFGLSVHGLVLKSGLDSVVNLGNALVDMYGKF 261
Query: 280 GDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTL 339
GDLE + RVF+ + EK+ W S +G +A G+ + + +F+ + + V P TL++ L
Sbjct: 262 GDLESSMRVFNGMQEKNEVSWNSALGCFAHAGFHEDVLEMFRVMSEHEVTPGSVTLSSLL 321
Query: 340 SACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLA 399
A +LG GKE+ Y + +ES+ + SL+ M++K G + KA +FE + +++
Sbjct: 322 PALVDLGYFHLGKEVHGYSIRRAMESDIFIANSLMDMYAKFGCLEKASAIFENIEGRNVV 381
Query: 400 VWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDG-----L 454
W+AMI A +G +A +L +MQ G P++ ++L ACS V G
Sbjct: 382 SWNAMIANLAQNGAETEAFSLVIEMQK-NGECPNSFTLVNLLPACSRVASVKMGKQIHAW 440
Query: 455 SFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLA 489
S +S+ S+ + + L+D+ + G+ +A
Sbjct: 441 SIHRSLMSDLFVSNA------LIDVYAKCGQLSVA 469
Score = 125 bits (313), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 77/249 (30%), Positives = 129/249 (51%), Gaps = 8/249 (3%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI N NG+ E S M + G NSFT +L AC+ + S+ GK++H+ +
Sbjct: 386 MIANLAQNGAETEAFSLVIEMQKNGECPNSFTLVNLLPACSRVASVKMGKQIHAWSIHRS 445
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
D FV LID+Y+KC ++ + D + VS+N++I +S++ E++ +
Sbjct: 446 LMSDLFVSNALIDVYAKCGQLSVAQDIFDRSE---KDDVSYNTLIVGYSQSQCCFESLHL 502
Query: 121 LKEMWVLGLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
++M G+E A +F+ +S C +F+QG +H + + LLN LANS++ +Y
Sbjct: 503 FQQMRSAGIEYDAVSFMGCLSACANLSAFKQGKEIHGVLVRR-LLNTHPFLANSLLDLYT 561
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K G + A IF+ I + SW T+I GY G ++ AF L + M+ V D V ++
Sbjct: 562 KGGMLATASKIFNRITRKDVASWNTMILGYGMHGQIDVAFELFDLMKDDGVDYDHVSYIA 621
Query: 237 LILGCAQVG 245
++ C+ G
Sbjct: 622 VLSACSHGG 630
>gi|326507410|dbj|BAK03098.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 698
Score = 322 bits (825), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 187/583 (32%), Positives = 311/583 (53%), Gaps = 17/583 (2%)
Query: 20 SMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCS 79
+M + G+ N+F L++ A + G ++HS +K G + F T L+ MY+KC
Sbjct: 91 AMHERGLAANTFALGSALRSAAAMGCSALGTQLHSLAVKAGLADNVFSATALLHMYAKCG 150
Query: 80 DFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSV 139
+ ++ D MP R + VSWN++++ + + A+ + EM G +TF ++
Sbjct: 151 RTRDACRLFDGMPER--NTVSWNALVAGYVESGKVAPAVQLFVEMEREGFLPDEATFAAL 208
Query: 140 V-----SGCSFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGET 194
+ S C +H + K G I L N+ ++ Y++ G + +R IFDEIG+
Sbjct: 209 LTVVNDSTCFLMH--QLHGKIVKYGSALGLIVL-NAAITAYSQCGALANSRRIFDEIGDR 265
Query: 195 S-IVSWTTIIGGYVNVGNVNEAFGLCNQMRRMS-VTPDLVVFLNLILGCAQVGNLFLALS 252
S ++SW ++G Y G +EA M R S V PD+ F ++I CA+ +
Sbjct: 266 SDLISWNAMLGAYATHGMEHEAMRFFASMMRASGVQPDMYSFTSIISACAEHRD-HGGTV 324
Query: 253 MHSLLLKSGYNNEDPLDNLLVSMYTKCGD---LELARRVFDAVLEKSVFLWTSMIGGYAQ 309
+H L+ K+G+ + N L++MYT+ + +E A + FD++L K W SM+ GY+Q
Sbjct: 325 IHGLVSKNGFEGVTHVCNALIAMYTRFSENCMMEDAYKCFDSLLLKDTVSWNSMLTGYSQ 384
Query: 310 LGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQV 369
G ++A+ F+ + ++ +E + L +C++L L G++I ++ +G SN V
Sbjct: 385 HGLSADALRFFRCMQSENITTDEYAFSAALRSCSDLALLRLGRQIHGLVIRSGFASNNFV 444
Query: 370 QTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEG 429
+SLI M+SK G ++ A + FE W++M+ GYA HG +LF +M ++
Sbjct: 445 SSSLIFMYSKSGILDDAMKSFEEADKSSSVPWNSMMFGYAQHGKAQAVRSLFNQMLELK- 503
Query: 430 LKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLA 489
+ D + + +++ACSH+G+VD+G +M+S +GI +EHY C +DL GRAG+ D A
Sbjct: 504 VPLDHITFVGLITACSHAGLVDEGSEILNTMESRYGIPLRMEHYACGIDLYGRAGQLDKA 563
Query: 490 LKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSA 549
+ I MP E A VW LL AC H N+EL A +LL P Y+L++N+++
Sbjct: 564 KELIDSMPFEPDAMVWMTLLGACRVHGNMELASDVASHLLEAEPRQHSTYVLLSNMYSGL 623
Query: 550 GMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSH 592
GMW + A + M ++ L+K PGWS +E+ V F A D SH
Sbjct: 624 GMWSDRAIVQKEMKNKGLSKVPGWSWIEVKNEVHSFNAEDGSH 666
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 136/463 (29%), Positives = 220/463 (47%), Gaps = 34/463 (7%)
Query: 51 RVHSHVLKVGFQQDAFVQTGLIDMYSKCSD-FVSSRKVLDEMPVRLRSVVSWNSIISAHS 109
+ H+ +LK G L+ YS S ++R++ DE+P RL SWNS+++AH
Sbjct: 21 KSHATLLKSGVTSPT-PWNQLLTAYSVSSPGLAAARRLFDEIP-RL-DAASWNSLLAAHV 77
Query: 110 RACLNDEAILVLKEMWVLGLELSASTFV-------SVVSGCSFRQGISMHCCVYKLGLLN 162
+ A +L+ M G L+A+TF + GCS G +H K GL +
Sbjct: 78 SIGAHPAACRLLRAMHERG--LAANTFALGSALRSAAAMGCS-ALGTQLHSLAVKAGLAD 134
Query: 163 NEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQM 222
N A +++ MYAK G+ +A +FD + E + VSW ++ GYV G V A L +M
Sbjct: 135 NVFS-ATALLHMYAKCGRTRDACRLFDGMPERNTVSWNALVAGYVESGKVAPAVQLFVEM 193
Query: 223 RRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDL 282
R PD F L L FL +H ++K G + N ++ Y++CG L
Sbjct: 194 EREGFLPDEATFAAL-LTVVNDSTCFLMHQLHGKIVKYGSALGLIVLNAAITAYSQCGAL 252
Query: 283 ELARRVFDAVLEKSVFL-WTSMIGGYAQLGYPSEAVNLFKRLLKTS-VRPNEATLATTLS 340
+RR+FD + ++S + W +M+G YA G EA+ F +++ S V+P+ + + +S
Sbjct: 253 ANSRRIFDEIGDRSDLISWNAMLGAYATHGMEHEAMRFFASMMRASGVQPDMYSFTSIIS 312
Query: 341 ACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGR---INKAKEVFERVPDKD 397
ACAE G I + NG E V +LI M+++ + A + F+ + KD
Sbjct: 313 ACAEHRD-HGGTVIHGLVSKNGFEGVTHVCNALIAMYTRFSENCMMEDAYKCFDSLLLKD 371
Query: 398 LAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVD-----D 452
W++M+ GY+ HG+ AL F MQ E + D +++ L +CS ++
Sbjct: 372 TVSWNSMLTGYSQHGLSADALRFFRCMQ-SENITTDEYAFSAALRSCSDLALLRLGRQIH 430
Query: 453 GLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHE 495
GL SN + S L+ + ++G D A+K+ E
Sbjct: 431 GLVIRSGFASNNFVSSS------LIFMYSKSGILDDAMKSFEE 467
Score = 105 bits (263), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 86/342 (25%), Positives = 163/342 (47%), Gaps = 20/342 (5%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQ-TGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKV 59
M+ +G E + ++SM++ +GV + ++F ++ ACA + G +H V K
Sbjct: 274 MLGAYATHGMEHEAMRFFASMMRASGVQPDMYSFTSIISACAE-HRDHGGTVIHGLVSKN 332
Query: 60 GFQQDAFVQTGLIDMYSKCSD---FVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDE 116
GF+ V LI MY++ S+ + K D + L+ VSWNS+++ +S+ L+ +
Sbjct: 333 GFEGVTHVCNALIAMYTRFSENCMMEDAYKCFDSL--LLKDTVSWNSMLTGYSQHGLSAD 390
Query: 117 AILVLKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVM 172
A+ + M + F + + CS R G +H V + G +N +++S++
Sbjct: 391 ALRFFRCMQSENITTDEYAFSAALRSCSDLALLRLGRQIHGLVIRSGFASNNF-VSSSLI 449
Query: 173 SMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLV 232
MY+K G +++A F+E ++S V W +++ GY G L NQM + V D +
Sbjct: 450 FMYSKSGILDDAMKSFEEADKSSSVPWNSMMFGYAQHGKAQAVRSLFNQMLELKVPLDHI 509
Query: 233 VFLNLILGCAQVGNLFLALSMHSLL--LKSGYNNEDPLDNLL--VSMYTKCGDLELARRV 288
F+ LI C+ G L +L ++S Y +++ + +Y + G L+ A+ +
Sbjct: 510 TFVGLITACSHAG---LVDEGSEILNTMESRYGIPLRMEHYACGIDLYGRAGQLDKAKEL 566
Query: 289 FDAV-LEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVR 329
D++ E +W +++G G A ++ LL+ R
Sbjct: 567 IDSMPFEPDAMVWMTLLGACRVHGNMELASDVASHLLEAEPR 608
>gi|357114751|ref|XP_003559158.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Brachypodium distachyon]
Length = 695
Score = 322 bits (825), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 190/621 (30%), Positives = 342/621 (55%), Gaps = 14/621 (2%)
Query: 6 TNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDA 65
T NG E ++ ++ M+ +GV N F F L ACA+ +++ G++VHS ++ GF D+
Sbjct: 69 TRNGRPEAAMAAFADMVASGVAPNDFAFNAALAACADASALRAGEQVHSLAVRAGFAGDS 128
Query: 66 FVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMW 125
+V + L+++YS+C D +++ V D M VV + S++SA R+ + A+ L +M
Sbjct: 129 WVGSSLVELYSRCGDLGAAKGVFDRMESP--DVVGYTSLVSAFCRSGEFELAVDTLHQML 186
Query: 126 VLGLELSASTFVSVV-SGCSFRQGISMHCCVYK-LGLLNNEIPLANSVMSMYAKFGKVNE 183
G+E + T S++ S C F G +H + K +GL + + +++++ Y++ + +
Sbjct: 187 RQGVEPNEHTMASILGSCCPFVLGEQVHAYMIKAMGLHSQSMYASSALIDFYSRNSEFDM 246
Query: 184 ARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQM-RRMSVTPDLVVFLNLILGCA 242
A+++F+ + ++V+W +++ ++ G +A + + M V P+ F + C
Sbjct: 247 AKAVFNNLHCKNVVTWCSMMQLHIRDGRPEDALQVFDDMISEGVVEPNEFAFSIALGAC- 305
Query: 243 QVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTS 302
G++ L +HS +K ++ + N L+SMY + ++ V + + WT+
Sbjct: 306 --GSIALGRQLHSSAIKRNLTSDLRVSNALLSMYGRICHVQELEAVLKDIENPDIVSWTT 363
Query: 303 MIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNG 362
I Q G+ +A+ L L + PN+ ++ LS+CA+L L +G++ + G
Sbjct: 364 AISANFQNGFSEKAIALLSMLHSRGLMPNDYAFSSALSSCADLALLDQGRQFHCLALKLG 423
Query: 363 LESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFY 422
+ +LI+++SKCG+I AK F+ + +D+ W+++I+GYA HG AL +F
Sbjct: 424 CDLKICTGNALINLYSKCGQIAPAKLAFDVMDHRDVTSWNSLIHGYAQHGDASMALQVFG 483
Query: 423 KMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSM--QSNFGIEPSIEHYLCLVDLL 480
+M+ + G +PD + +L+AC+H+GMV++G++ F+++ S G PS HY C+VD++
Sbjct: 484 EMRSIRGTEPDESSFLGVLAACNHAGMVNEGVALFRAIASHSQHGATPSPSHYACVVDMM 543
Query: 481 GRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPG----ST 536
GR+GRFD AL+ + EMP A +W LL++C H N+E GE AA+ L+ L+ G +
Sbjct: 544 GRSGRFDDALRLVEEMPFRPGALIWKTLLASCRLHGNLETGELAAERLMELSEGGEDRDS 603
Query: 537 GNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSV 596
+Y+LM+ + G W++A R MD+ + KE G S VE+ V FVA D+SH S
Sbjct: 604 ASYVLMSGIHAMRGEWRDAYRVRRRMDEAGVRKEAGCSWVEVHNEVHTFVARDKSHPDSA 663
Query: 597 DIRKTLKELHIKLLEAGYIAE 617
I + L EL + + AE
Sbjct: 664 SIYQILWELFDAMQDTACDAE 684
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 74/270 (27%), Positives = 131/270 (48%), Gaps = 5/270 (1%)
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K G + +A +FD + +IV+WT+ + G G A M V P+ F
Sbjct: 39 KSGSLGDALDLFDRMPRKNIVAWTSAVSGLTRNGRPEAAMAAFADMVASGVAPNDFAFNA 98
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
+ CA L +HSL +++G+ + + + LV +Y++CGDL A+ VFD +
Sbjct: 99 ALAACADASALRAGEQVHSLAVRAGFAGDSWVGSSLVELYSRCGDLGAAKGVFDRMESPD 158
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEE 356
V +TS++ + + G AV+ ++L+ V PNE T+A+ L +C G+++
Sbjct: 159 VVGYTSLVSAFCRSGEFELAVDTLHQMLRQGVEPNEHTMASILGSCC---PFVLGEQVHA 215
Query: 357 YIVLN-GLESNRQVQTS-LIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMG 414
Y++ GL S +S LI +S+ + AK VF + K++ W +M+ + G
Sbjct: 216 YMIKAMGLHSQSMYASSALIDFYSRNSEFDMAKAVFNNLHCKNVVTWCSMMQLHIRDGRP 275
Query: 415 DQALNLFYKMQHVEGLKPDAVVYTSILSAC 444
+ AL +F M ++P+ ++ L AC
Sbjct: 276 EDALQVFDDMISEGVVEPNEFAFSIALGAC 305
>gi|326497609|dbj|BAK05894.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 322 bits (825), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 181/554 (32%), Positives = 304/554 (54%), Gaps = 6/554 (1%)
Query: 71 LIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLE 130
L Y++ D ++ L P S+ +WN++++AHSR EA+ V + +
Sbjct: 42 LATAYARAGDLAAAESTLATAPTSPSSIPAWNALLAAHSRGASPHEALRVFRAL-PPAAR 100
Query: 131 LSASTFVSVVSGCSFRQGISMHCCVYKLGL---LNNEIPLANSVMSMYAKFGKVNEARSI 187
++TF +S C+ ++ V N+I + +SV+++YAK G +++A +
Sbjct: 101 PDSTTFTLALSACARLGDLATGEVVTDRASGAGYGNDIFVCSSVLNLYAKCGAMDDAVKV 160
Query: 188 FDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNL 247
FD + + V+W+T++ G+VN G +A + +MRR + D VV + ++ CA G+
Sbjct: 161 FDRMRKRDRVTWSTMVTGFVNAGQPVQAIEMYMRMRRDGLEADEVVIVGVMQACAATGDA 220
Query: 248 FLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGY 307
+ S+H LL+ + + LV MY K G + ARRVF+ + ++ W+++I
Sbjct: 221 RMGASVHGYLLRHAMQMDVVISTSLVDMYAKNGLFDQARRVFELMPHRNDVSWSALISQL 280
Query: 308 AQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNR 367
AQ G EA+ LF+ + + + PN + L AC++LG L GK I +I L LE +R
Sbjct: 281 AQYGNADEALGLFRMMQVSGLHPNSGPVVGALLACSDLGLLKLGKSIHGFI-LRTLELDR 339
Query: 368 QVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHV 427
V T++I M+SKCG ++ A+ +F++V +DL W+ MI HG G AL+LF +M+
Sbjct: 340 MVGTAVIDMYSKCGSLSSAQMLFDKVVSRDLISWNVMIACCGAHGRGRDALSLFQEMKRN 399
Query: 428 EGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFD 487
E ++PD + S+LSA SHSG+V++G +F M + +GIEP +H +C+VDLL R+G +
Sbjct: 400 E-VRPDHATFASLLSALSHSGLVEEGKFWFNCMVNEYGIEPGEKHLVCIVDLLARSGLVE 458
Query: 488 LALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFT 547
A + + + + LLS C+ ++ +ELGE A+ +L L PG G L++NL+
Sbjct: 459 EANGLVASLHSKPTISILVALLSGCLNNNKLELGESTAEKILELQPGDVGVLALVSNLYA 518
Query: 548 SAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKELHI 607
+A W + R LM D K PG S +EI G++ FV D+SH I + + +L
Sbjct: 519 AAKNWYKVREVRKLMKDHGSKKAPGCSSIEIRGALHTFVMEDQSHPQHRQILQMVMKLDS 578
Query: 608 KLLEAGYIAEADIV 621
++ + GYI + + V
Sbjct: 579 EMRKMGYIPKTEFV 592
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 110/412 (26%), Positives = 204/412 (49%), Gaps = 19/412 (4%)
Query: 6 TNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDA 65
+ S E L + + L +S TF L L ACA + + G+ V G+ D
Sbjct: 80 SRGASPHEALRVFRA-LPPAARPDSTTFTLALSACARLGDLATGEVVTDRASGAGYGNDI 138
Query: 66 FVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMW 125
FV + ++++Y+KC + KV D M R R V+W+++++ A +AI + M
Sbjct: 139 FVCSSVLNLYAKCGAMDDAVKVFDRM--RKRDRVTWSTMVTGFVNAGQPVQAIEMYMRMR 196
Query: 126 VLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKV 181
GLE V V+ C+ R G S+H + + + ++ ++ S++ MYAK G
Sbjct: 197 RDGLEADEVVIVGVMQACAATGDARMGASVHGYLLRHA-MQMDVVISTSLVDMYAKNGLF 255
Query: 182 NEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGC 241
++AR +F+ + + VSW+ +I GN +EA GL M+ + P+ + +L C
Sbjct: 256 DQARRVFELMPHRNDVSWSALISQLAQYGNADEALGLFRMMQVSGLHPNSGPVVGALLAC 315
Query: 242 AQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWT 301
+ +G L L S+H +L++ + + ++ MY+KCG L A+ +FD V+ + + W
Sbjct: 316 SDLGLLKLGKSIHGFILRT-LELDRMVGTAVIDMYSKCGSLSSAQMLFDKVVSRDLISWN 374
Query: 302 SMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGK-----EIEE 356
MI G +A++LF+ + + VRP+ AT A+ LSA + G + +GK + E
Sbjct: 375 VMIACCGAHGRGRDALSLFQEMKRNEVRPDHATFASLLSALSHSGLVEEGKFWFNCMVNE 434
Query: 357 YIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKD-LAVWSAMING 407
Y G+E + ++ + ++ G + +A + + K +++ A+++G
Sbjct: 435 Y----GIEPGEKHLVCIVDLLARSGLVEEANGLVASLHSKPTISILVALLSG 482
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 69/249 (27%), Positives = 122/249 (48%), Gaps = 8/249 (3%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
M+ N G + + Y M + G+ + V++ACA G VH ++L+
Sbjct: 175 MVTGFVNAGQPVQAIEMYMRMRRDGLEADEVVIVGVMQACAATGDARMGASVHGYLLRHA 234
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
Q D + T L+DMY+K F +R+V + MP R+ VSW+++IS ++ DEA+ +
Sbjct: 235 MQMDVVISTSLVDMYAKNGLFDQARRVFELMP--HRNDVSWSALISQLAQYGNADEALGL 292
Query: 121 LKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
+ M V GL ++ V + CS + G S+H + + L+ + +V+ MY+
Sbjct: 293 FRMMQVSGLHPNSGPVVGALLACSDLGLLKLGKSIHGFILRTLELDRMV--GTAVIDMYS 350
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K G ++ A+ +FD++ ++SW +I G +A L +M+R V PD F +
Sbjct: 351 KCGSLSSAQMLFDKVVSRDLISWNVMIACCGAHGRGRDALSLFQEMKRNEVRPDHATFAS 410
Query: 237 LILGCAQVG 245
L+ + G
Sbjct: 411 LLSALSHSG 419
>gi|147791119|emb|CAN74703.1| hypothetical protein VITISV_029224 [Vitis vinifera]
Length = 677
Score = 322 bits (825), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 196/613 (31%), Positives = 317/613 (51%), Gaps = 47/613 (7%)
Query: 7 NNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAF 66
+NG + E LS YS + + V + FTFP +LKA A +NS G+ +H+ ++K GF D +
Sbjct: 70 SNGFYREALSLYSKLHSSSVLEHKFTFPFLLKASAKLNSPLQGQILHTQLIKTGFHLDIY 129
Query: 67 VQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWV 126
T L DMY K + KV +EMP R++ S N IS SR EA+ K++ +
Sbjct: 130 AATALADMYMKLHLLSYALKVFEEMP--HRNLPSLNVTISGFSRNGYFREALGAFKQVGL 187
Query: 127 LGLELSASTFVSVVSGC-SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEAR 185
++ T SV+ C S +HC KLG + ++I +A +V++MY+ G++ A+
Sbjct: 188 GNFRPNSVTIASVLPACASVELDGQVHCLAIKLG-VESDIYVATAVVTMYSNCGELVLAK 246
Query: 186 SIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMS-VTPDLVVFLNLILGCAQV 244
+FD+I + ++VS+ I G + G + F + + S P+ V ++++ C+++
Sbjct: 247 KVFDQILDKNVVSYNAFISGLLQNGAPHLVFDVFKDLLESSGEVPNSVTLVSILSACSKL 306
Query: 245 GNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKC------------------------- 279
+ +H L++K N + + LV MY+KC
Sbjct: 307 LYIRFGRQIHGLVVKIEINFDTMVGTALVDMYSKCGCWHWAYGIFIELSGSRNLVTWNSM 366
Query: 280 -------GDLELARRVFDAV----LEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSV 328
G ++A +F+ + LE W +MI G++Q G EA F ++ V
Sbjct: 367 IAGMMLNGQSDIAVELFEQLEPEGLEPDSATWNTMISGFSQQGQVVEAFKFFHKMQSAGV 426
Query: 329 RPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKE 388
+ ++ + L AC+ L +L GKEI + + ++++ + T+LI M+ KCG A+
Sbjct: 427 IASLKSITSLLRACSALSALQSGKEIHGHTIRTNIDTDEFISTALIDMYMKCGHSYLARR 486
Query: 389 V---FERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACS 445
V F+ PD D A W+AMI+GY +G A +F +MQ E ++P++ SILS CS
Sbjct: 487 VFCQFQIKPD-DPAFWNAMISGYGRNGKYQSAFEIFNQMQE-EKVQPNSATLVSILSVCS 544
Query: 446 HSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVW 505
H+G +D G FK M ++G+ P+ EH+ C+VDLLGR+GR A + IHEMP E V+
Sbjct: 545 HTGEIDRGWQLFKMMNRDYGLNPTSEHFGCMVDLLGRSGRLKEAQELIHEMP-EASVSVF 603
Query: 506 APLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDR 565
A LL AC H + LGE AK L L P +++++N++ G W + R +M+DR
Sbjct: 604 ASLLGACRHHSDSALGEEMAKKLSELEPQDPTPFVILSNIYAVQGRWGDVERVREMMNDR 663
Query: 566 RLTKEPGWSQVEI 578
L K PG S + +
Sbjct: 664 GLKKPPGCSSIGV 676
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 72/249 (28%), Positives = 129/249 (51%), Gaps = 3/249 (1%)
Query: 197 VSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSL 256
+S I V+ G EA L +++ SV F L+ A++ + +H+
Sbjct: 59 ISMKRDIAKLVSNGFYREALSLYSKLHSSSVLEHKFTFPFLLKASAKLNSPLQGQILHTQ 118
Query: 257 LLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEA 316
L+K+G++ + L MY K L A +VF+ + +++ I G+++ GY EA
Sbjct: 119 LIKTGFHLDIYAATALADMYMKLHLLSYALKVFEEMPHRNLPSLNVTISGFSRNGYFREA 178
Query: 317 VNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHM 376
+ FK++ + RPN T+A+ L ACA S+ ++ + G+ES+ V T+++ M
Sbjct: 179 LGAFKQVGLGNFRPNSVTIASVLPACA---SVELDGQVHCLAIKLGVESDIYVATAVVTM 235
Query: 377 FSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVV 436
+S CG + AK+VF+++ DK++ ++A I+G +G ++F + G P++V
Sbjct: 236 YSNCGELVLAKKVFDQILDKNVVSYNAFISGLLQNGAPHLVFDVFKDLLESSGEVPNSVT 295
Query: 437 YTSILSACS 445
SILSACS
Sbjct: 296 LVSILSACS 304
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 102/211 (48%), Gaps = 8/211 (3%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI + G E + M GV + + +L+AC+ ++++ GK +H H ++
Sbjct: 401 MISGFSQQGQVVEAFKFFHKMQSAGVIASLKSITSLLRACSALSALQSGKEIHGHTIRTN 460
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
D F+ T LIDMY KC +R+V + ++ WN++IS + R A +
Sbjct: 461 IDTDEFISTALIDMYMKCGHSYLARRVFCQFQIKPDDPAFWNAMISGYGRNGKYQSAFEI 520
Query: 121 LKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGLLNNEIPLANS------VMSM 174
+M ++ +++T VS++S CS I ++K ++N + L + ++ +
Sbjct: 521 FNQMQEEKVQPNSATLVSILSVCSHTGEIDRGWQLFK--MMNRDYGLNPTSEHFGCMVDL 578
Query: 175 YAKFGKVNEARSIFDEIGETSIVSWTTIIGG 205
+ G++ EA+ + E+ E S+ + +++G
Sbjct: 579 LGRSGRLKEAQELIHEMPEASVSVFASLLGA 609
>gi|296082284|emb|CBI21289.3| unnamed protein product [Vitis vinifera]
Length = 581
Score = 322 bits (825), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 168/459 (36%), Positives = 259/459 (56%), Gaps = 33/459 (7%)
Query: 191 IGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLA 250
+ +T++ SW ++I G+ EA + MR++S+ P+ F I C+ + +L
Sbjct: 36 VDKTNVFSWNSVIAELARSGDSVEALRAFSSMRKLSLKPNRSTFPCAIKSCSALLDLHSG 95
Query: 251 LSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELAR------------------------ 286
H L G+ + + + LV MY+KCG+L AR
Sbjct: 96 RQAHQQALIFGFEPDLFVSSALVDMYSKCGELRDARTLFDEISHRNIVSWTSMITGYVQN 155
Query: 287 -------RVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKT-SVRPNEATLATT 338
RVFD + E+ V W S+I YAQ G +E++ +F R++K + N TL+
Sbjct: 156 DDAHRALRVFDGMAERDVISWNSIIAVYAQNGMSTESMEIFHRMVKDGEINYNAVTLSAV 215
Query: 339 LSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDL 398
L ACA GS GK I + ++ GLESN V TS+I M+ KCG++ A++ F+R+ +K++
Sbjct: 216 LLACAHSGSQRLGKCIHDQVIKMGLESNVFVGTSIIDMYCKCGKVEMARKAFDRMREKNV 275
Query: 399 AVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFK 458
WSAM+ GY +HG +AL +FY+M + G+KP+ + + S+L+ACSH+G++++G +FK
Sbjct: 276 KSWSAMVAGYGMHGHAKEALEVFYEMN-MAGVKPNYITFVSVLAACSHAGLLEEGWHWFK 334
Query: 459 SMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNV 518
+M F +EP +EHY C+VDLLGRAG A I M + VW LL AC H NV
Sbjct: 335 AMSHEFDVEPGVEHYGCMVDLLGRAGYLKEAFDLIKGMKLRPDFVVWGALLGACRMHKNV 394
Query: 519 ELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEI 578
+LGE +A+ L L+P + G Y+L++N++ AG W++ R LM + L K PG+S V+I
Sbjct: 395 DLGEISARKLFELDPKNCGYYVLLSNIYADAGRWEDVERMRILMKNSGLVKPPGFSLVDI 454
Query: 579 DGSVQVFVAGDRSHHLSVDIRKTLKELHIKLLEAGYIAE 617
G V VF+ GDR H I + L++L +KL E GY+ +
Sbjct: 455 KGRVHVFLVGDREHPQHEKIYEYLEKLSMKLQEVGYVPD 493
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 113/431 (26%), Positives = 192/431 (44%), Gaps = 81/431 (18%)
Query: 97 SVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCS----FRQGISMH 152
+V SWNS+I+ +R+ + EA+ M L L+ + STF + CS G H
Sbjct: 40 NVFSWNSVIAELARSGDSVEALRAFSSMRKLSLKPNRSTFPCAIKSCSALLDLHSGRQAH 99
Query: 153 CCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNV 212
G ++ ++++++ MY+K G++ +AR++FDEI +IVSWT++I GYV +
Sbjct: 100 QQALIFGF-EPDLFVSSALVDMYSKCGELRDARTLFDEISHRNIVSWTSMITGYVQNDDA 158
Query: 213 NEAFGLCNQMRRMSV----------------TPDLVVFLNLI----------------LG 240
+ A + + M V T + +F ++ L
Sbjct: 159 HRALRVFDGMAERDVISWNSIIAVYAQNGMSTESMEIFHRMVKDGEINYNAVTLSAVLLA 218
Query: 241 CAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLW 300
CA G+ L +H ++K G + + ++ MY KCG +E+AR+ FD + EK+V W
Sbjct: 219 CAHSGSQRLGKCIHDQVIKMGLESNVFVGTSIIDMYCKCGKVEMARKAFDRMREKNVKSW 278
Query: 301 TSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVL 360
++M+ GY G+ EA+ +F + V+PN T + L+AC+ G L +G +
Sbjct: 279 SAMVAGYGMHGHAKEALEVFYEMNMAGVKPNYITFVSVLAACSHAGLLEEG-----WHWF 333
Query: 361 NGLESNRQVQTSLIH---MFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQA 417
+ V+ + H M GR KE F+ I GM
Sbjct: 334 KAMSHEFDVEPGVEHYGCMVDLLGRAGYLKEAFD-----------------LIKGM---- 372
Query: 418 LNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEP-SIEHYLCL 476
L+PD VV+ ++L AC VD G S + F ++P + +Y+ L
Sbjct: 373 -----------KLRPDFVVWGALLGACRMHKNVDLGEI---SARKLFELDPKNCGYYVLL 418
Query: 477 VDLLGRAGRFD 487
++ AGR++
Sbjct: 419 SNIYADAGRWE 429
Score = 138 bits (348), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 106/389 (27%), Positives = 175/389 (44%), Gaps = 73/389 (18%)
Query: 6 TNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDA 65
+G E L +SSM + + N TFP +K+C+ + + G++ H L GF+ D
Sbjct: 52 ARSGDSVEALRAFSSMRKLSLKPNRSTFPCAIKSCSALLDLHSGRQAHQQALIFGFEPDL 111
Query: 66 FVQTGLIDMYSKCSDFVSSRKVLDEMPVR-----------------------------LR 96
FV + L+DMYSKC + +R + DE+ R R
Sbjct: 112 FVSSALVDMYSKCGELRDARTLFDEISHRNIVSWTSMITGYVQNDDAHRALRVFDGMAER 171
Query: 97 SVVSWNSIISAHSRACLNDEAILVLKEMWVLG-LELSASTFVSVVSGC----SFRQGISM 151
V+SWNSII+ +++ ++ E++ + M G + +A T +V+ C S R G +
Sbjct: 172 DVISWNSIIAVYAQNGMSTESMEIFHRMVKDGEINYNAVTLSAVLLACAHSGSQRLGKCI 231
Query: 152 HCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGN 211
H V K+GL +N + + S++ MY K GKV AR FD + E ++ SW+ ++ GY G+
Sbjct: 232 HDQVIKMGLESN-VFVGTSIIDMYCKCGKVEMARKAFDRMREKNVKSWSAMVAGYGMHGH 290
Query: 212 VNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNL 271
EA + +M V P+ + F++++ C+ G LL+ G++
Sbjct: 291 AKEALEVFYEMNMAGVKPNYITFVSVLAACSHAG-----------LLEEGWH-------- 331
Query: 272 LVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPN 331
+ K E FD +E V + M+ + GY EA +L K + +RP+
Sbjct: 332 ----WFKAMSHE-----FD--VEPGVEHYGCMVDLLGRAGYLKEAFDLIKGM---KLRPD 377
Query: 332 EATLATTLSAC-----AELGSLSKGKEIE 355
L AC +LG +S K E
Sbjct: 378 FVVWGALLGACRMHKNVDLGEISARKLFE 406
Score = 102 bits (253), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 70/305 (22%), Positives = 144/305 (47%), Gaps = 43/305 (14%)
Query: 288 VFDAVLEKS-VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELG 346
+F+ ++K+ VF W S+I A+ G EA+ F + K S++PN +T + +C+ L
Sbjct: 31 LFNKYVDKTNVFSWNSVIAELARSGDSVEALRAFSSMRKLSLKPNRSTFPCAIKSCSALL 90
Query: 347 SLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMIN 406
L G++ + ++ G E + V ++L+ M+SKCG + A+ +F+ + +++ W++MI
Sbjct: 91 DLHSGRQAHQQALIFGFEPDLFVSSALVDMYSKCGELRDARTLFDEISHRNIVSWTSMIT 150
Query: 407 G-------------------------------YAIHGMGDQALNLFYKMQHVEGLKPDAV 435
G YA +GM +++ +F++M + +AV
Sbjct: 151 GYVQNDDAHRALRVFDGMAERDVISWNSIIAVYAQNGMSTESMEIFHRMVKDGEINYNAV 210
Query: 436 VYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHE 495
+++L AC+HSG G + G+E ++ ++D+ + G+ ++A K
Sbjct: 211 TLSAVLLACAHSGSQRLGKCIHDQV-IKMGLESNVFVGTSIIDMYCKCGKVEMARKAFDR 269
Query: 496 MPVEVQAQVWAPLLSACMKHHNVE--LGEYAAKNLLTLNPGSTGNYILMANLFTS---AG 550
M E + W+ +++ H + + L + N+ + P NYI ++ + AG
Sbjct: 270 MR-EKNVKSWSAMVAGYGMHGHAKEALEVFYEMNMAGVKP----NYITFVSVLAACSHAG 324
Query: 551 MWKEA 555
+ +E
Sbjct: 325 LLEEG 329
>gi|242084292|ref|XP_002442571.1| hypothetical protein SORBIDRAFT_08g022230 [Sorghum bicolor]
gi|241943264|gb|EES16409.1| hypothetical protein SORBIDRAFT_08g022230 [Sorghum bicolor]
Length = 698
Score = 322 bits (825), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 186/567 (32%), Positives = 308/567 (54%), Gaps = 15/567 (2%)
Query: 49 GKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAH 108
G ++ S +K G + F + L+D+Y+KC +R+V D MPVR + VSWN++I+ +
Sbjct: 114 GAQLQSFAVKSGLVDNVFSASALLDVYAKCGRLSDARRVFDGMPVR--NTVSWNALIAGY 171
Query: 109 SRACLNDEAILVLKEMWVLGLELSASTF---VSVVSGCSFRQGIS-MHCCVYKLGLLNNE 164
+ + +A+ + EM + L +TF ++ V G S+ + +H + K G
Sbjct: 172 AESRKPAQAMELFLEMQRVELVPDDATFAALLATVEGPSWYSLMQQLHGKIAKYGSALGL 231
Query: 165 IPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGL-CNQMR 223
+ L N+ ++ Y++ G ++R IFD I ++SW +++G Y G +EA MR
Sbjct: 232 VVL-NAAITAYSQCGAFADSRRIFDGIQSRDLISWNSMLGAYAYHGMDDEAMRFFVRMMR 290
Query: 224 RMSVTPDLVVFLNLILGCAQVG-NLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGD- 281
V PD+ F +++ C++ G + S+HSL++K G + N +++MYT+ +
Sbjct: 291 ESGVQPDMYSFTSVVSVCSEHGCDDRQGRSIHSLVVKIGLEGVTHVCNAMIAMYTRFTEN 350
Query: 282 --LELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTL 339
+E A + FD+++ K W SM+ GY+ G S+A+ F+ + +V +E L+ L
Sbjct: 351 CMMEDAYKCFDSLVFKDAVSWNSMLTGYSHHGLSSDALRFFRFMRAENVSTDEFALSAAL 410
Query: 340 SACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLA 399
+C++L L G+++ ++ +G SN V +SLI M+SKCG + A++ FE
Sbjct: 411 RSCSDLAVLRLGRQVHSLVIQSGFSSNDFVSSSLIFMYSKCGMVGDARKSFEEADKGSSV 470
Query: 400 VWSAMINGYAIHGMGDQALNLFYKM-QHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFK 458
W++M+ GYA HG +LF +M H L D V + ++L+A SH G+VD+G
Sbjct: 471 PWNSMMFGYAQHGQAQTVTDLFSEMLDHKVPL--DHVTFVALLTAYSHGGLVDEGSEILN 528
Query: 459 SMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNV 518
SM++ + I +EHY C VDL GRAG+ D A + I MP + A VW LL AC H N+
Sbjct: 529 SMETRYKIPLRMEHYACGVDLYGRAGQLDKAKELIESMPFQPDAMVWMTLLGACRIHGNM 588
Query: 519 ELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEI 578
EL A +L P Y+L++++++ GMW + AT + +M +R L+K PGWS +E+
Sbjct: 589 ELASDVASHLFVAEPRQHSTYVLLSSMYSGRGMWSDRATVQKVMKNRGLSKVPGWSWIEV 648
Query: 579 DGSVQVFVAGDRSHHLSVDIRKTLKEL 605
V F A DRSH +I L+ L
Sbjct: 649 KNEVHSFNADDRSHPRMDEIFDMLRML 675
Score = 169 bits (427), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 110/378 (29%), Positives = 192/378 (50%), Gaps = 17/378 (4%)
Query: 79 SDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFV- 137
S ++R+V DE+P VSWNS+++AH A + +A +LK+M G L+ASTF
Sbjct: 43 SGLAAARRVFDEIP--RPDAVSWNSLLAAHVAAGAHRDAWRLLKDMHARG--LTASTFAL 98
Query: 138 -----SVVSGCSFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIG 192
S + G + K GL++N + A++++ +YAK G++++AR +FD +
Sbjct: 99 GSALRSAAAARRPELGAQLQSFAVKSGLVDN-VFSASALLDVYAKCGRLSDARRVFDGMP 157
Query: 193 ETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALS 252
+ VSW +I GY +A L +M+R+ + PD F L+ L
Sbjct: 158 VRNTVSWNALIAGYAESRKPAQAMELFLEMQRVELVPDDATFAALLATVEGPSWYSLMQQ 217
Query: 253 MHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGY 312
+H + K G + N ++ Y++CG +RR+FD + + + W SM+G YA G
Sbjct: 218 LHGKIAKYGSALGLVVLNAAITAYSQCGAFADSRRIFDGIQSRDLISWNSMLGAYAYHGM 277
Query: 313 PSEAVNLFKRLLKTS-VRPNEATLATTLSACAELGSLSK-GKEIEEYIVLNGLESNRQVQ 370
EA+ F R+++ S V+P+ + + +S C+E G + G+ I +V GLE V
Sbjct: 278 DDEAMRFFVRMMRESGVQPDMYSFTSVVSVCSEHGCDDRQGRSIHSLVVKIGLEGVTHVC 337
Query: 371 TSLIHMFSKCGR---INKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHV 427
++I M+++ + A + F+ + KD W++M+ GY+ HG+ AL F++
Sbjct: 338 NAMIAMYTRFTENCMMEDAYKCFDSLVFKDAVSWNSMLTGYSHHGLSSDALR-FFRFMRA 396
Query: 428 EGLKPDAVVYTSILSACS 445
E + D ++ L +CS
Sbjct: 397 ENVSTDEFALSAALRSCS 414
Score = 145 bits (367), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 85/302 (28%), Positives = 146/302 (48%), Gaps = 3/302 (0%)
Query: 169 NSVMSMYAKFGK---VNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRM 225
N +++ Y+ G + AR +FDEI VSW +++ +V G +A+ L M
Sbjct: 30 NQLLTAYSASGPGSGLAAARRVFDEIPRPDAVSWNSLLAAHVAAGAHRDAWRLLKDMHAR 89
Query: 226 SVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELA 285
+T + + A L + S +KSG + + L+ +Y KCG L A
Sbjct: 90 GLTASTFALGSALRSAAAARRPELGAQLQSFAVKSGLVDNVFSASALLDVYAKCGRLSDA 149
Query: 286 RRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAEL 345
RRVFD + ++ W ++I GYA+ P++A+ LF + + + P++AT A L+
Sbjct: 150 RRVFDGMPVRNTVSWNALIAGYAESRKPAQAMELFLEMQRVELVPDDATFAALLATVEGP 209
Query: 346 GSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMI 405
S +++ I G V + I +S+CG ++ +F+ + +DL W++M+
Sbjct: 210 SWYSLMQQLHGKIAKYGSALGLVVLNAAITAYSQCGAFADSRRIFDGIQSRDLISWNSML 269
Query: 406 NGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFG 465
YA HGM D+A+ F +M G++PD +TS++S CS G D S+ G
Sbjct: 270 GAYAYHGMDDEAMRFFVRMMRESGVQPDMYSFTSVVSVCSEHGCDDRQGRSIHSLVVKIG 329
Query: 466 IE 467
+E
Sbjct: 330 LE 331
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 102/220 (46%), Gaps = 7/220 (3%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
M+ +++G + L + M V + F L++C+++ + G++VHS V++ G
Sbjct: 374 MLTGYSHHGLSSDALRFFRFMRAENVSTDEFALSAALRSCSDLAVLRLGRQVHSLVIQSG 433
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F + FV + LI MYSKC +RK +E S V WNS++ +++ +
Sbjct: 434 FSSNDFVSSSLIFMYSKCGMVGDARKSFEE--ADKGSSVPWNSMMFGYAQHGQAQTVTDL 491
Query: 121 LKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGLLNNEIPLA----NSVMSMYA 176
EM + L TFV++++ S + + +IPL + +Y
Sbjct: 492 FSEMLDHKVPLDHVTFVALLTAYSHGGLVDEGSEILNSMETRYKIPLRMEHYACGVDLYG 551
Query: 177 KFGKVNEARSIFDEIG-ETSIVSWTTIIGGYVNVGNVNEA 215
+ G++++A+ + + + + + W T++G GN+ A
Sbjct: 552 RAGQLDKAKELIESMPFQPDAMVWMTLLGACRIHGNMELA 591
>gi|297847366|ref|XP_002891564.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297337406|gb|EFH67823.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 596
Score = 322 bits (825), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 185/571 (32%), Positives = 316/571 (55%), Gaps = 17/571 (2%)
Query: 50 KRVHSHVL--KVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISA 107
K++H VL + + + + L+ + + F +R++L + ++ S+ W+S++
Sbjct: 19 KQIHCLVLTSPIFYTRRDLFLSRLLRRCTAATQFRYARRLLCQ--IQTPSIQLWDSLVGH 76
Query: 108 HS-RACLNDE-AILVLKEMWVLGLELSASTFVSVVSGC-SFRQG--ISMHCCVYKLGLLN 162
S R LN + L ++M G+ S TF ++ R H + K G +
Sbjct: 77 FSGRVTLNRRLSFLSYRQMRRNGVVPSRHTFPPLLKAVFKLRDANPFQFHAHILKFGF-D 135
Query: 163 NEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQM 222
+++ + NS++S Y+ G +FD + +VSWT +I G+V + EA +M
Sbjct: 136 SDLFVRNSLISGYSNCGLFEFGSRVFDGTEDKDVVSWTAMIDGFVRNDSSLEAMTYFVEM 195
Query: 223 RRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDP-LDNLLVSMYTKCGD 281
+R V + + ++++ + ++ S+H L++G D + + LV MY KCG
Sbjct: 196 KRSGVAANEMTVVSVLKATRKAEDVRFGRSIHGFYLEAGRVRCDVFIGSSLVDMYGKCGC 255
Query: 282 LELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSA 341
+ A++VFD + ++V WT++I GY Q + + +F+ +LK+ V PNE TL++ LSA
Sbjct: 256 YDDAQKVFDEMPSRNVVTWTALIAGYVQGRCFEKGMFVFEEMLKSDVAPNEKTLSSVLSA 315
Query: 342 CAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVW 401
CA +G+L +G+ + Y++ N +E N V T+LI ++KCG + +A VFER+ +K++ W
Sbjct: 316 CAHVGALHRGRRVHCYVIKNSIEINTTVGTTLIDFYAKCGCLEEAILVFERLREKNVYTW 375
Query: 402 SAMINGYAIHGMGDQALNLFYKM--QHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKS 459
+AMING+A HG A++LF+ M HV P+ V + +LSAC+H G+V++G F S
Sbjct: 376 TAMINGFAAHGYAIGAVDLFHTMLSSHVS---PNEVTFIVVLSACAHGGLVEEGRRLFLS 432
Query: 460 MQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVE 519
M+ F +EP +HY C+VDL GR G + A I MP+E VW L +C+ H + E
Sbjct: 433 MKERFNLEPKADHYACMVDLFGRKGLLEEAKALIERMPMEPTNAVWGALFGSCLIHKDYE 492
Query: 520 LGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEID 579
LG+YAA ++ L P +G Y L+ANL++ + W + A R M D+++ K PG S +E+
Sbjct: 493 LGKYAASRVIKLQPSHSGRYTLLANLYSESQNWDDVARVRKQMKDQQVVKSPGCSWIEVK 552
Query: 580 GSVQVFVAGDRSHHL-SVDIRKTLKELHIKL 609
G + F+A D L S D+ KTL + +++
Sbjct: 553 GKLHEFIAFDDKKPLESDDLYKTLDNVGVQM 583
Score = 199 bits (506), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 130/420 (30%), Positives = 210/420 (50%), Gaps = 16/420 (3%)
Query: 17 TYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYS 76
+Y M + GV + TFP +LKA + + + H+H+LK GF D FV+ LI YS
Sbjct: 91 SYRQMRRNGVVPSRHTFPPLLKAVFKLRDA-NPFQFHAHILKFGFDSDLFVRNSLISGYS 149
Query: 77 KCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTF 136
C F +V D + VVSW ++I R + EA+ EM G+ + T
Sbjct: 150 NCGLFEFGSRVFD--GTEDKDVVSWTAMIDGFVRNDSSLEAMTYFVEMKRSGVAANEMTV 207
Query: 137 VSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIG 192
VSV+ R G S+H + G + ++ + +S++ MY K G ++A+ +FDE+
Sbjct: 208 VSVLKATRKAEDVRFGRSIHGFYLEAGRVRCDVFIGSSLVDMYGKCGCYDDAQKVFDEMP 267
Query: 193 ETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALS 252
++V+WT +I GYV + + +M + V P+ +++ CA VG L
Sbjct: 268 SRNVVTWTALIAGYVQGRCFEKGMFVFEEMLKSDVAPNEKTLSSVLSACAHVGALHRGRR 327
Query: 253 MHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGY 312
+H ++K+ + L+ Y KCG LE A VF+ + EK+V+ WT+MI G+A GY
Sbjct: 328 VHCYVIKNSIEINTTVGTTLIDFYAKCGCLEEAILVFERLREKNVYTWTAMINGFAAHGY 387
Query: 313 PSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLN---GLESNRQV 369
AV+LF +L + V PNE T LSACA G + +G+ + ++ + LE
Sbjct: 388 AIGAVDLFHTMLSSHVSPNEVTFIVVLSACAHGGLVEEGRRL--FLSMKERFNLEPKADH 445
Query: 370 QTSLIHMFSKCGRINKAKEVFERVP-DKDLAVWSAMINGYAIHG---MGDQALNLFYKMQ 425
++ +F + G + +AK + ER+P + AVW A+ IH +G A + K+Q
Sbjct: 446 YACMVDLFGRKGLLEEAKALIERMPMEPTNAVWGALFGSCLIHKDYELGKYAASRVIKLQ 505
Score = 125 bits (313), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 89/319 (27%), Positives = 159/319 (49%), Gaps = 24/319 (7%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI N S E ++ + M ++GV N T VLKA + G+ +H L+ G
Sbjct: 175 MIDGFVRNDSSLEAMTYFVEMKRSGVAANEMTVVSVLKATRKAEDVRFGRSIHGFYLEAG 234
Query: 61 -FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAIL 119
+ D F+ + L+DMY KC + ++KV DEMP R+VV+W ++I+ + + ++ +
Sbjct: 235 RVRCDVFIGSSLVDMYGKCGCYDDAQKVFDEMPS--RNVVTWTALIAGYVQGRCFEKGMF 292
Query: 120 VLKEMWVLGLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMY 175
V +EM + + T SV+S C + +G +HC V K + N + +++ Y
Sbjct: 293 VFEEMLKSDVAPNEKTLSSVLSACAHVGALHRGRRVHCYVIKNSIEIN-TTVGTTLIDFY 351
Query: 176 AKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFL 235
AK G + EA +F+ + E ++ +WT +I G+ G A L + M V+P+ V F+
Sbjct: 352 AKCGCLEEAILVFERLREKNVYTWTAMINGFAAHGYAIGAVDLFHTMLSSHVSPNEVTFI 411
Query: 236 NLILGCAQVG------NLFLALSMHSLLLKSGYNNEDPLDNL--LVSMYTKCGDLELARR 287
++ CA G LFL+ +K +N E D+ +V ++ + G LE A+
Sbjct: 412 VVLSACAHGGLVEEGRRLFLS-------MKERFNLEPKADHYACMVDLFGRKGLLEEAKA 464
Query: 288 VFDAV-LEKSVFLWTSMIG 305
+ + + +E + +W ++ G
Sbjct: 465 LIERMPMEPTNAVWGALFG 483
>gi|225442928|ref|XP_002265258.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39680-like [Vitis vinifera]
Length = 703
Score = 322 bits (825), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 190/589 (32%), Positives = 319/589 (54%), Gaps = 11/589 (1%)
Query: 36 VLKACANINSIWDGKRVHSHVLKVG-FQQDAFVQTG-LIDMYSKCSDFVSSRKVLDEMPV 93
+LK A+ ++ GK +H+H++ +D VQ LI++Y+KC + +R + D M
Sbjct: 31 LLKVSADTKNLKFGKMIHAHLIITNQATKDNIVQVNSLINLYAKCDQIMVARILFDGM-- 88
Query: 94 RLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLG-LELSASTFVSVVSGCS----FRQG 148
R R+VVSW ++++ + L E + + K M + + + F +++S CS +G
Sbjct: 89 RKRNVVSWGALMAGYFHNGLVLEVLRLFKTMISVDYMRPNEYIFATIISSCSDSGQVVEG 148
Query: 149 ISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVN 208
H K GL+ ++ + N+++ MY++ V A S++ E+ + S+ II G +
Sbjct: 149 WQCHGYALKSGLVFHQY-VKNALICMYSRRSDVKGAMSVWYEVPGLDVFSYNIIINGLLE 207
Query: 209 VGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPL 268
G +EA + ++M + D V ++ C+ + +L L L +H + ++G + +
Sbjct: 208 NGYPSEALEVLDRMVDECIVWDNVTYVTAFGLCSHLKDLRLGLQVHCRMFRTGAEYDSFV 267
Query: 269 DNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSV 328
+ ++ MY KCG++ AR+VF+ + K+V WT+++ Y+Q G EA+N F + +
Sbjct: 268 SSAIIDMYGKCGNILNARKVFNRLQTKNVVSWTAILAAYSQNGCFEEALNFFPEMEVDGL 327
Query: 329 RPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKE 388
PNE T A L++CA + +L GK + I +G E + V +LI+M+SK G I A +
Sbjct: 328 LPNEYTFAVLLNSCAGISALGHGKLLHTRIKKSGFEDHIIVGNALINMYSKSGSIEAAHK 387
Query: 389 VFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSG 448
VF + +D WSAMI G + HG+G +AL +F +M + P V + +LSAC+H G
Sbjct: 388 VFLEMICRDSITWSAMICGLSHHGLGREALVVFQEMLAAKEC-PHYVTFVGVLSACAHLG 446
Query: 449 MVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPL 508
V +G + + GIEP +EHY C+V LL +AGR D A + PV+ W L
Sbjct: 447 SVQEGFYYLNQLMKQTGIEPGVEHYTCIVGLLCKAGRLDEAENFMKSTPVKWDVVAWRTL 506
Query: 509 LSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLT 568
LSAC H N LG+ A+ +L ++PG G YIL++N++ A W R LM +R +
Sbjct: 507 LSACHVHQNYGLGKKVAELVLQMDPGDVGTYILLSNMYAKAKRWDGVVKIRKLMRERNVK 566
Query: 569 KEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKELHIKLLEAGYIAE 617
KEPG S +EI S+ VFV+ ++H S I + ++EL + GY+ +
Sbjct: 567 KEPGASWIEIRNSIHVFVSEGKTHPESNQIYEKVQELLTMIRPMGYVPD 615
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 116/428 (27%), Positives = 211/428 (49%), Gaps = 13/428 (3%)
Query: 7 NNGSFEETLSTYSSMLQTG-VHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDA 65
+NG E L + +M+ + N + F ++ +C++ + +G + H + LK G
Sbjct: 105 HNGLVLEVLRLFKTMISVDYMRPNEYIFATIISSCSDSGQVVEGWQCHGYALKSGLVFHQ 164
Query: 66 FVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMW 125
+V+ LI MYS+ SD + V E+P V S+N II+ EA+ VL M
Sbjct: 165 YVKNALICMYSRRSDVKGAMSVWYEVPG--LDVFSYNIIINGLLENGYPSEALEVLDRMV 222
Query: 126 VLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKV 181
+ T+V+ CS R G+ +HC +++ G + ++++++ MY K G +
Sbjct: 223 DECIVWDNVTYVTAFGLCSHLKDLRLGLQVHCRMFRTGAEYDSF-VSSAIIDMYGKCGNI 281
Query: 182 NEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGC 241
AR +F+ + ++VSWT I+ Y G EA +M + P+ F L+ C
Sbjct: 282 LNARKVFNRLQTKNVVSWTAILAAYSQNGCFEEALNFFPEMEVDGLLPNEYTFAVLLNSC 341
Query: 242 AQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWT 301
A + L +H+ + KSG+ + + N L++MY+K G +E A +VF ++ + W+
Sbjct: 342 AGISALGHGKLLHTRIKKSGFEDHIIVGNALINMYSKSGSIEAAHKVFLEMICRDSITWS 401
Query: 302 SMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKG-KEIEEYIVL 360
+MI G + G EA+ +F+ +L P+ T LSACA LGS+ +G + + +
Sbjct: 402 AMICGLSHHGLGREALVVFQEMLAAKECPHYVTFVGVLSACAHLGSVQEGFYYLNQLMKQ 461
Query: 361 NGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDK-DLAVWSAMINGYAIH---GMGDQ 416
G+E + T ++ + K GR+++A+ + P K D+ W +++ +H G+G +
Sbjct: 462 TGIEPGVEHYTCIVGLLCKAGRLDEAENFMKSTPVKWDVVAWRTLLSACHVHQNYGLGKK 521
Query: 417 ALNLFYKM 424
L +M
Sbjct: 522 VAELVLQM 529
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 94/387 (24%), Positives = 177/387 (45%), Gaps = 43/387 (11%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+I NG E L M+ + ++ T+ C+++ + G +VH + + G
Sbjct: 201 IINGLLENGYPSEALEVLDRMVDECIVWDNVTYVTAFGLCSHLKDLRLGLQVHCRMFRTG 260
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+ D+FV + +IDMY KC + +++RKV + + + ++VVSW +I++A+S+ +EA+
Sbjct: 261 AEYDSFVSSAIIDMYGKCGNILNARKVFNRL--QTKNVVSWTAILAAYSQNGCFEEALNF 318
Query: 121 LKEMWVLGLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
EM V GL + TF +++ C + G +H + K G + I + N++++MY+
Sbjct: 319 FPEMEVDGLLPNEYTFAVLLNSCAGISALGHGKLLHTRIKKSG-FEDHIIVGNALINMYS 377
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K G + A +F E+ ++W+ +I G + G EA + +M P V F+
Sbjct: 378 KSGSIEAAHKVFLEMICRDSITWSAMICGLSHHGLGREALVVFQEMLAAKECPHYVTFVG 437
Query: 237 LILGCAQVGNLFLAL-SMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEK 295
++ CA +G++ ++ L+ ++G +E
Sbjct: 438 VLSACAHLGSVQEGFYYLNQLMKQTG-------------------------------IEP 466
Query: 296 SVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIE 355
V +T ++G + G EA N K T V+ + T LSAC + GK++
Sbjct: 467 GVEHYTCIVGLLCKAGRLDEAENFMK---STPVKWDVVAWRTLLSACHVHQNYGLGKKVA 523
Query: 356 EYIVLNGLESNRQVQTSLIHMFSKCGR 382
E +VL + L +M++K R
Sbjct: 524 E-LVLQMDPGDVGTYILLSNMYAKAKR 549
>gi|225424928|ref|XP_002270695.1| PREDICTED: pentatricopeptide repeat-containing protein At2g02750
[Vitis vinifera]
gi|296086418|emb|CBI32007.3| unnamed protein product [Vitis vinifera]
Length = 617
Score = 322 bits (825), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 196/613 (31%), Positives = 317/613 (51%), Gaps = 47/613 (7%)
Query: 7 NNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAF 66
+NG + E LS YS + + V + FTFP +LKA A +NS G+ +H+ ++K GF D +
Sbjct: 10 SNGFYREALSLYSKLHSSSVLEHKFTFPFLLKASAKLNSPLQGQILHTQLIKTGFHLDIY 69
Query: 67 VQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWV 126
T L DMY K + KV +EMP R++ S N IS SR EA+ K++ +
Sbjct: 70 AATALADMYMKLHLLSYALKVFEEMP--HRNLPSLNVTISGFSRNGYFREALGAFKQVGL 127
Query: 127 LGLELSASTFVSVVSGC-SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEAR 185
++ T SV+ C S +HC KLG + ++I +A +V++MY+ G++ A+
Sbjct: 128 GNFRPNSVTIASVLPACASVELDGQVHCLAIKLG-VESDIYVATAVVTMYSNCGELVLAK 186
Query: 186 SIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMS-VTPDLVVFLNLILGCAQV 244
+FD+I + ++VS+ I G + G + F + + S P+ V ++++ C+++
Sbjct: 187 KVFDQILDKNVVSYNAFISGLLQNGAPHLVFDVFKDLLESSGEVPNSVTLVSILSACSKL 246
Query: 245 GNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKC------------------------- 279
+ +H L++K N + + LV MY+KC
Sbjct: 247 LYIRFGRQIHGLVVKIEINFDTMVGTALVDMYSKCGCWHWAYGIFIELSGSRNLVTWNSM 306
Query: 280 -------GDLELARRVFDAV----LEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSV 328
G ++A +F+ + LE W +MI G++Q G EA F ++ V
Sbjct: 307 IAGMMLNGQSDIAVELFEQLEPEGLEPDSATWNTMISGFSQQGQVVEAFKFFHKMQSAGV 366
Query: 329 RPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKE 388
+ ++ + L AC+ L +L GKEI + + ++++ + T+LI M+ KCG A+
Sbjct: 367 IASLKSITSLLRACSALSALQSGKEIHGHTIRTNIDTDEFISTALIDMYMKCGHSYLARR 426
Query: 389 V---FERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACS 445
V F+ PD D A W+AMI+GY +G A +F +MQ E ++P++ SILS CS
Sbjct: 427 VFCQFQIKPD-DPAFWNAMISGYGRNGKYQSAFEIFNQMQE-EKVQPNSATLVSILSVCS 484
Query: 446 HSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVW 505
H+G +D G FK M ++G+ P+ EH+ C+VDLLGR+GR A + IHEMP E V+
Sbjct: 485 HTGEIDRGWQLFKMMNRDYGLNPTSEHFGCMVDLLGRSGRLKEAQELIHEMP-EASVSVF 543
Query: 506 APLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDR 565
A LL AC H + LGE AK L L P +++++N++ G W + R +M+DR
Sbjct: 544 ASLLGACRHHSDSALGEEMAKKLSELEPQDPTPFVILSNIYAVQGRWGDVERVREMMNDR 603
Query: 566 RLTKEPGWSQVEI 578
L K PG S + +
Sbjct: 604 GLKKPPGCSSIGV 616
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 102/211 (48%), Gaps = 8/211 (3%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI + G E + M GV + + +L+AC+ ++++ GK +H H ++
Sbjct: 341 MISGFSQQGQVVEAFKFFHKMQSAGVIASLKSITSLLRACSALSALQSGKEIHGHTIRTN 400
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
D F+ T LIDMY KC +R+V + ++ WN++IS + R A +
Sbjct: 401 IDTDEFISTALIDMYMKCGHSYLARRVFCQFQIKPDDPAFWNAMISGYGRNGKYQSAFEI 460
Query: 121 LKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGLLNNEIPLANS------VMSM 174
+M ++ +++T VS++S CS I ++K ++N + L + ++ +
Sbjct: 461 FNQMQEEKVQPNSATLVSILSVCSHTGEIDRGWQLFK--MMNRDYGLNPTSEHFGCMVDL 518
Query: 175 YAKFGKVNEARSIFDEIGETSIVSWTTIIGG 205
+ G++ EA+ + E+ E S+ + +++G
Sbjct: 519 LGRSGRLKEAQELIHEMPEASVSVFASLLGA 549
>gi|356498282|ref|XP_003517982.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g02980-like [Glycine max]
Length = 609
Score = 322 bits (825), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 176/519 (33%), Positives = 287/519 (55%), Gaps = 9/519 (1%)
Query: 107 AHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGC-SFRQGISMHCCVYKLGLLNNEI 165
+HS LN EA E LE +S+ +S++ C S R+ + Y + N
Sbjct: 11 SHSLTKLNTEA--PRHEPNTAALEPPSSSILSLIPKCTSLRELKQIQ--AYTIKTHQNNP 66
Query: 166 PLANSVMSMYAK---FGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQM 222
+ +++ ++ A +FD+I + IV + T+ GY + A LC+Q+
Sbjct: 67 TVLTKLINFCTSNPTIASMDHAHRMFDKIPQPDIVLFNTMARGYARFDDPLRAILLCSQV 126
Query: 223 RRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDL 282
+ PD F +L+ CA++ L +H L +K G + + L++MYT C D+
Sbjct: 127 LCSGLLPDDYTFSSLLKACARLKALEEGKQLHCLAVKLGVGDNMYVCPTLINMYTACNDV 186
Query: 283 ELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSAC 342
+ ARRVFD + E V + ++I A+ P+EA+ LF+ L ++ ++P + T+ LS+C
Sbjct: 187 DAARRVFDKIGEPCVVAYNAIITSCARNSRPNEALALFRELQESGLKPTDVTMLVALSSC 246
Query: 343 AELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWS 402
A LG+L G+ I EY+ NG + +V T+LI M++KCG ++ A VF+ +P +D WS
Sbjct: 247 ALLGALDLGRWIHEYVKKNGFDQYVKVNTALIDMYAKCGSLDDAVSVFKDMPRRDTQAWS 306
Query: 403 AMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQS 462
AMI YA HG G QA+++ +M+ + ++PD + + IL ACSH+G+V++G +F SM
Sbjct: 307 AMIVAYATHGHGSQAISMLREMKKAK-VQPDEITFLGILYACSHTGLVEEGYEYFHSMTH 365
Query: 463 NFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGE 522
+GI PSI+HY C++DLLGRAGR + A K I E+P++ +W LLS+C H NVE+ +
Sbjct: 366 EYGIVPSIKHYGCMIDLLGRAGRLEEACKFIDELPIKPTPILWRTLLSSCSSHGNVEMAK 425
Query: 523 YAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSV 582
+ + L+ G+Y++++NL G W + R +M D+ K PG S +E++ V
Sbjct: 426 LVIQRIFELDDSHGGDYVILSNLCARNGRWDDVNHLRKMMVDKGALKVPGCSSIEVNNVV 485
Query: 583 QVFVAGDRSHHLSVDIRKTLKELHIKLLEAGYIAEADIV 621
F +GD H S + L EL +L AGY+ + +V
Sbjct: 486 HEFFSGDGVHSTSTILHHALDELVKELKLAGYVPDTSLV 524
Score = 125 bits (314), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 77/313 (24%), Positives = 165/313 (52%), Gaps = 9/313 (2%)
Query: 19 SSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKC 78
S +L +G+ + +TF +LKACA + ++ +GK++H +K+G + +V LI+MY+ C
Sbjct: 124 SQVLCSGLLPDDYTFSSLLKACARLKALEEGKQLHCLAVKLGVGDNMYVCPTLINMYTAC 183
Query: 79 SDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVS 138
+D ++R+V D+ + VV++N+II++ +R +EA+ + +E+ GL+ + T +
Sbjct: 184 NDVDAARRVFDK--IGEPCVVAYNAIITSCARNSRPNEALALFRELQESGLKPTDVTMLV 241
Query: 139 VVSGCSFRQGISM----HCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGET 194
+S C+ + + H V K G + + + +++ MYAK G +++A S+F ++
Sbjct: 242 ALSSCALLGALDLGRWIHEYVKKNG-FDQYVKVNTALIDMYAKCGSLDDAVSVFKDMPRR 300
Query: 195 SIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALS-M 253
+W+ +I Y G+ ++A + +M++ V PD + FL ++ C+ G +
Sbjct: 301 DTQAWSAMIVAYATHGHGSQAISMLREMKKAKVQPDEITFLGILYACSHTGLVEEGYEYF 360
Query: 254 HSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAV-LEKSVFLWTSMIGGYAQLGY 312
HS+ + G ++ + + G LE A + D + ++ + LW +++ + G
Sbjct: 361 HSMTHEYGIVPSIKHYGCMIDLLGRAGRLEEACKFIDELPIKPTPILWRTLLSSCSSHGN 420
Query: 313 PSEAVNLFKRLLK 325
A + +R+ +
Sbjct: 421 VEMAKLVIQRIFE 433
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 108/221 (48%), Gaps = 9/221 (4%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+I + N E L+ + + ++G+ T + L +CA + ++ G+ +H +V K G
Sbjct: 207 IITSCARNSRPNEALALFRELQESGLKPTDVTMLVALSSCALLGALDLGRWIHEYVKKNG 266
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F Q V T LIDMY+KC + V +MP R +W+++I A++ +AI +
Sbjct: 267 FDQYVKVNTALIDMYAKCGSLDDAVSVFKDMP--RRDTQAWSAMIVAYATHGHGSQAISM 324
Query: 121 LKEMWVLGLELSASTFVSVVSGCS----FRQGIS-MHCCVYKLGLLNNEIPLANSVMSMY 175
L+EM ++ TF+ ++ CS +G H ++ G++ + I ++ +
Sbjct: 325 LREMKKAKVQPDEITFLGILYACSHTGLVEEGYEYFHSMTHEYGIVPS-IKHYGCMIDLL 383
Query: 176 AKFGKVNEARSIFDEIG-ETSIVSWTTIIGGYVNVGNVNEA 215
+ G++ EA DE+ + + + W T++ + GNV A
Sbjct: 384 GRAGRLEEACKFIDELPIKPTPILWRTLLSSCSSHGNVEMA 424
>gi|297816218|ref|XP_002875992.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297321830|gb|EFH52251.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 721
Score = 322 bits (825), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 180/564 (31%), Positives = 308/564 (54%), Gaps = 12/564 (2%)
Query: 62 QQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVL 121
+ + F ++ Y+K S +R++ DE P VS+N++IS ++ A A+++
Sbjct: 71 EPNVFSYNVIVKAYAKDSKIHIARQLFDENP--QPDTVSYNTLISGYADARETVAAMVLF 128
Query: 122 KEMWVLGLELSASTFVSVVSGCSFRQGI--SMHCCVYKLGLLNNEIPLANSVMSMYAKFG 179
K M LG E+ T +++ C R + +HC G ++ + N+ ++ Y+K G
Sbjct: 129 KRMRELGFEVDGFTLSGLIAACCDRVDLIKQLHCFAVSGGF-DSYSSVNNAFVTYYSKGG 187
Query: 180 KVNEARSIFDEI-GETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLI 238
+ EA S+F + G VSW ++I Y +A L +M D+ +++
Sbjct: 188 LLREAVSVFYGMDGLRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVL 247
Query: 239 LGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGD---LELARRVFDAVLEK 295
+ +L H L+K+G++ + + L+ Y+KCG + + +VF +L
Sbjct: 248 NALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGRDGMSDSEKVFQEILSP 307
Query: 296 SVFLWTSMIGGYA-QLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEI 354
+ LW +MI GY+ + EAV F+++ + RP++ + SAC+ L S S+GK+I
Sbjct: 308 DLVLWNTMISGYSMNEEHSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQGKQI 367
Query: 355 EEYIVLNGLESNR-QVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGM 413
+ + + SNR V +LI ++ K G + A+ VF+R+P+ + ++ MI GYA HG
Sbjct: 368 HGLAIKSNIPSNRISVNNALISLYYKSGNLLDARRVFDRMPELNAVSFNCMIKGYAQHGH 427
Query: 414 GDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHY 473
G +AL L+ +M G+ P+ + + +ILSAC+H G VD+G +F +M+ F IEP EHY
Sbjct: 428 GTEALRLYQRMLD-SGIAPNNITFVAILSACAHCGKVDEGQKYFNTMKETFKIEPEAEHY 486
Query: 474 LCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNP 533
C++DLLGRAG+ + A + I MP + + WA LL AC KH N+ L E AAK L+ + P
Sbjct: 487 SCMIDLLGRAGKLEEAERFIDAMPYKPGSVAWAALLGACRKHKNMALAERAAKELMVMQP 546
Query: 534 GSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHH 593
+ Y+++AN++ AG W+E A+ R M +R+ K+PG S +E+ VFVA D SH
Sbjct: 547 LAATPYVMLANMYADAGKWEEMASVRKSMRGKRIRKKPGCSWIEVKKKKHVFVAEDWSHP 606
Query: 594 LSVDIRKTLKELHIKLLEAGYIAE 617
+ ++ + L+E+ K+ + GY+ +
Sbjct: 607 MIREVNEYLEEMMKKMKKVGYVMD 630
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 87/305 (28%), Positives = 151/305 (49%), Gaps = 14/305 (4%)
Query: 13 ETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLI 72
+ L+ Y M+ G + FT VL A +++ + G++ H ++K GF Q++ V +GLI
Sbjct: 223 KALALYKEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLI 282
Query: 73 DMYSKC---SDFVSSRKVLDEMPVRLRSVVSWNSIISAHS-RACLNDEAILVLKEMWVLG 128
D YSKC S KV E + +V WN++IS +S ++EA+ ++M +G
Sbjct: 283 DFYSKCGGRDGMSDSEKVFQE--ILSPDLVLWNTMISGYSMNEEHSEEAVKSFRQMQRIG 340
Query: 129 LELSASTFVSVVSGCSF----RQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEA 184
+FV V S CS QG +H K + +N I + N+++S+Y K G + +A
Sbjct: 341 HRPDDCSFVCVTSACSNLSSPSQGKQIHGLAIKSNIPSNRISVNNALISLYYKSGNLLDA 400
Query: 185 RSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQV 244
R +FD + E + VS+ +I GY G+ EA L +M + P+ + F+ ++ CA
Sbjct: 401 RRVFDRMPELNAVSFNCMIKGYAQHGHGTEALRLYQRMLDSGIAPNNITFVAILSACAHC 460
Query: 245 GNLFLALSMHSLLLKSGYNNEDPLDNL--LVSMYTKCGDLELARRVFDAVLEK-SVFLWT 301
G + + +K + E ++ ++ + + G LE A R DA+ K W
Sbjct: 461 GKVDEGQKYFN-TMKETFKIEPEAEHYSCMIDLLGRAGKLEEAERFIDAMPYKPGSVAWA 519
Query: 302 SMIGG 306
+++G
Sbjct: 520 ALLGA 524
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 107/415 (25%), Positives = 186/415 (44%), Gaps = 54/415 (13%)
Query: 148 GISMHCCVYKLGLLNNEIPLANSVMSMYAKFG---------------------------- 179
G S+H +Y ++ + L+N +++Y+K G
Sbjct: 27 GKSLHA-LYVKSIVASSTYLSNHFVNLYSKCGCLSYARAAFDSTEEPNVFSYNVIVKAYA 85
Query: 180 ---KVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K++ AR +FDE + VS+ T+I GY + A L +MR + D
Sbjct: 86 KDSKIHIARQLFDENPQPDTVSYNTLISGYADARETVAAMVLFKRMRELGFEVDGFTLSG 145
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAV--LE 294
LI C +L L H + G+++ ++N V+ Y+K G L A VF + L
Sbjct: 146 LIAACCDRVDLIKQL--HCFAVSGGFDSYSSVNNAFVTYYSKGGLLREAVSVFYGMDGLR 203
Query: 295 KSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEI 354
V W SMI Y Q ++A+ L+K ++ + + TLA+ L+A L L G++
Sbjct: 204 DEV-SWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQF 262
Query: 355 EEYIVLNGLESNRQVQTSLIHMFSKCG---RINKAKEVFERVPDKDLAVWSAMINGYAIH 411
++ G N V + LI +SKCG ++ +++VF+ + DL +W+ MI+GY+++
Sbjct: 263 HGKLIKAGFHQNSHVGSGLIDFYSKCGGRDGMSDSEKVFQEILSPDLVLWNTMISGYSMN 322
Query: 412 -GMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSH-----SGMVDDGLSFFKSMQSNFG 465
++A+ F +MQ + G +PD + + SACS+ G GL+ ++ SN
Sbjct: 323 EEHSEEAVKSFRQMQRI-GHRPDDCSFVCVTSACSNLSSPSQGKQIHGLAIKSNIPSN-- 379
Query: 466 IEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKH-HNVE 519
I L+ L ++G A + MP E+ A + ++ +H H E
Sbjct: 380 ---RISVNNALISLYYKSGNLLDARRVFDRMP-ELNAVSFNCMIKGYAQHGHGTE 430
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 68/242 (28%), Positives = 108/242 (44%), Gaps = 35/242 (14%)
Query: 234 FLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVL 293
F +L+L +LF S+H+L +KS + L N V++Y+KCG L AR FD+
Sbjct: 11 FRDLLLKSVAERDLFTGKSLHALYVKSIVASSTYLSNHFVNLYSKCGCLSYARAAFDSTE 70
Query: 294 EKSVF-------------------------------LWTSMIGGYAQLGYPSEAVNLFKR 322
E +VF + ++I GYA A+ LFKR
Sbjct: 71 EPNVFSYNVIVKAYAKDSKIHIARQLFDENPQPDTVSYNTLISGYADARETVAAMVLFKR 130
Query: 323 LLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGR 382
+ + + TL+ ++AC + L K++ + V G +S V + + +SK G
Sbjct: 131 MRELGFEVDGFTLSGLIAACCDRVDLI--KQLHCFAVSGGFDSYSSVNNAFVTYYSKGGL 188
Query: 383 INKAKEVFERVPD-KDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSIL 441
+ +A VF + +D W++MI Y H G +AL L YK +G K D S+L
Sbjct: 189 LREAVSVFYGMDGLRDEVSWNSMIVAYGQHKEGAKALAL-YKEMIFKGFKIDMFTLASVL 247
Query: 442 SA 443
+A
Sbjct: 248 NA 249
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 107/252 (42%), Gaps = 43/252 (17%)
Query: 5 STNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQD 64
S N EE + ++ M + G + +F V AC+N++S GK++H +K +
Sbjct: 320 SMNEEHSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQGKQIHGLAIKSNIPSN 379
Query: 65 AF-VQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKE 123
V LI +Y K + + +R+V D MP + VS+N +I +++ EA+ + +
Sbjct: 380 RISVNNALISLYYKSGNLLDARRVFDRMPE--LNAVSFNCMIKGYAQHGHGTEALRLYQR 437
Query: 124 MWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNE 183
M G+ + TFV+++S C+ HC GKV+E
Sbjct: 438 MLDSGIAPNNITFVAILSACA-------HC-------------------------GKVDE 465
Query: 184 ARSIFDEIGETSIVS-----WTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLI 238
+ F+ + ET + ++ +I G + EA + M P V + L+
Sbjct: 466 GQKYFNTMKETFKIEPEAEHYSCMIDLLGRAGKLEEAERFIDA---MPYKPGSVAWAALL 522
Query: 239 LGCAQVGNLFLA 250
C + N+ LA
Sbjct: 523 GACRKHKNMALA 534
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 72/142 (50%), Gaps = 11/142 (7%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI+ +G E L Y ML +G+ N+ TF +L ACA+ + +G++ + + +K
Sbjct: 418 MIKGYAQHGHGTEALRLYQRMLDSGIAPNNITFVAILSACAHCGKVDEGQK-YFNTMKET 476
Query: 61 F--QQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISA---HSRACLND 115
F + +A + +ID+ + + + +D MP + S V+W +++ A H L +
Sbjct: 477 FKIEPEAEHYSCMIDLLGRAGKLEEAERFIDAMPYKPGS-VAWAALLGACRKHKNMALAE 535
Query: 116 EAILVLKEMWVLGLELSASTFV 137
A KE+ V+ L+A+ +V
Sbjct: 536 RAA---KELMVMQ-PLAATPYV 553
>gi|449444429|ref|XP_004139977.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
mitochondrial-like [Cucumis sativus]
gi|449475689|ref|XP_004154524.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
mitochondrial-like [Cucumis sativus]
Length = 586
Score = 322 bits (824), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 172/497 (34%), Positives = 285/497 (57%), Gaps = 10/497 (2%)
Query: 129 LELSASTFVSVVSGCSFRQGISMHCCVYKLGLLNNEIP---LANSVMSMYAKFGKVNEAR 185
L A T+ ++ C R + V++ N P L N++++MY KFG ++EAR
Sbjct: 12 LSADAITYSELIKCCLVRGAVQQARLVHEHVFSNGYEPKTFLINTLINMYVKFGLLDEAR 71
Query: 186 SIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVG 245
++FDE+ + ++VSWTT+I Y N ++A M R V P++ + +++ C +
Sbjct: 72 NLFDEMPDRNVVSWTTMISAYSNSNLNHKALDFLILMLREGVRPNMYTYSSVLRACDGLL 131
Query: 246 NLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIG 305
NL +H +LK G ++ + + L+ Y+K G+ A VF+ ++ + +W S+IG
Sbjct: 132 NL---RQLHGSILKVGLESDVFVRSALIDTYSKLGEQHDALNVFNEMITGDLVVWNSIIG 188
Query: 306 GYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLES 365
G+AQ E ++L+KR+ + +++TL + L AC L L G+++ +++ +
Sbjct: 189 GFAQNSDGDETLHLYKRMKRADFVADQSTLTSVLRACTGLALLELGRQVHVHVL--KYDQ 246
Query: 366 NRQVQTSLIHMFSKCGRINKAKEVFERV-PDKDLAVWSAMINGYAIHGMGDQALNLFYKM 424
+ + +L+ M+ KCG + A +F R+ +KD+ WS MI G A +G AL LF M
Sbjct: 247 DLILNNALLDMYCKCGSLEDANLLFTRMMTEKDVISWSTMIAGLAQNGFSADALKLFEAM 306
Query: 425 QHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAG 484
+ +G KP+ + +L ACSH+G+V+DG +F+SM+ +FGI+P EHY C++DLLGRAG
Sbjct: 307 KS-KGPKPNYITILGVLFACSHAGLVNDGWYYFQSMKEHFGIDPGREHYGCIIDLLGRAG 365
Query: 485 RFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMAN 544
+ D A+K IHEM E A W LL AC H NV+L YAAK +L L+P G YIL++N
Sbjct: 366 KLDEAVKLIHEMNHEPDAVTWRILLGACRVHKNVDLAIYAAKEILKLDPADAGTYILLSN 425
Query: 545 LFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKE 604
++ ++ W++ A R M R + K+PG S +E+ V F+ GD SH +I++ L +
Sbjct: 426 IYANSQKWEDVAEVRRKMRTRGVKKDPGCSWIEVSKQVHAFILGDNSHPRIEEIKRELSQ 485
Query: 605 LHIKLLEAGYIAEADIV 621
L +L+ GY+ + + V
Sbjct: 486 LIQRLMRLGYVPDTNFV 502
Score = 182 bits (463), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 124/459 (27%), Positives = 236/459 (51%), Gaps = 25/459 (5%)
Query: 15 LSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDM 74
+ +M + + ++ T+ ++K C ++ + VH HV G++ F+ LI+M
Sbjct: 1 MKAMEAMHRNRLSADAITYSELIKCCLVRGAVQQARLVHEHVFSNGYEPKTFLINTLINM 60
Query: 75 YSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSAS 134
Y K +R + DEMP R+VVSW ++ISA+S + LN +A+ L M G+ +
Sbjct: 61 YVKFGLLDEARNLFDEMPD--RNVVSWTTMISAYSNSNLNHKALDFLILMLREGVRPNMY 118
Query: 135 TFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDE 190
T+ SV+ C + RQ +H + K+G L +++ + ++++ Y+K G+ ++A ++F+E
Sbjct: 119 TYSSVLRACDGLLNLRQ---LHGSILKVG-LESDVFVRSALIDTYSKLGEQHDALNVFNE 174
Query: 191 IGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLA 250
+ +V W +IIGG+ + +E L +M+R D +++ C + L L
Sbjct: 175 MITGDLVVWNSIIGGFAQNSDGDETLHLYKRMKRADFVADQSTLTSVLRACTGLALLELG 234
Query: 251 LSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVL-EKSVFLWTSMIGGYAQ 309
+H +LK Y+ + L+N L+ MY KCG LE A +F ++ EK V W++MI G AQ
Sbjct: 235 RQVHVHVLK--YDQDLILNNALLDMYCKCGSLEDANLLFTRMMTEKDVISWSTMIAGLAQ 292
Query: 310 LGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKG----KEIEEYIVLNGLES 365
G+ ++A+ LF+ + +PN T+ L AC+ G ++ G + ++E+ G++
Sbjct: 293 NGFSADALKLFEAMKSKGPKPNYITILGVLFACSHAGLVNDGWYYFQSMKEHF---GIDP 349
Query: 366 NRQVQTSLIHMFSKCGRINKA-KEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKM 424
R+ +I + + G++++A K + E + D W ++ +H D A+ Y
Sbjct: 350 GREHYGCIIDLLGRAGKLDEAVKLIHEMNHEPDAVTWRILLGACRVHKNVDLAI---YAA 406
Query: 425 QHVEGLKP-DAVVYTSILSACSHSGMVDDGLSFFKSMQS 462
+ + L P DA Y + + ++S +D + M++
Sbjct: 407 KEILKLDPADAGTYILLSNIYANSQKWEDVAEVRRKMRT 445
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 72/250 (28%), Positives = 121/250 (48%), Gaps = 13/250 (5%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI +N+ + L ML+ GV N +T+ VL+AC + + + +++H +LKVG
Sbjct: 88 MISAYSNSNLNHKALDFLILMLREGVRPNMYTYSSVLRAC---DGLLNLRQLHGSILKVG 144
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+ D FV++ LID YSK + + V +EM +V WNSII ++ DE + +
Sbjct: 145 LESDVFVRSALIDTYSKLGEQHDALNVFNEMIT--GDLVVWNSIIGGFAQNSDGDETLHL 202
Query: 121 LKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
K M ST SV+ C+ G +H V K + ++ L N+++ MY
Sbjct: 203 YKRMKRADFVADQSTLTSVLRACTGLALLELGRQVHVHVLK---YDQDLILNNALLDMYC 259
Query: 177 KFGKVNEARSIFDE-IGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFL 235
K G + +A +F + E ++SW+T+I G G +A L M+ P+ + L
Sbjct: 260 KCGSLEDANLLFTRMMTEKDVISWSTMIAGLAQNGFSADALKLFEAMKSKGPKPNYITIL 319
Query: 236 NLILGCAQVG 245
++ C+ G
Sbjct: 320 GVLFACSHAG 329
>gi|296081839|emb|CBI20844.3| unnamed protein product [Vitis vinifera]
Length = 700
Score = 322 bits (824), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 179/585 (30%), Positives = 318/585 (54%), Gaps = 12/585 (2%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHG----NSFTFPLVLKACANINSIWDGKRVHSHV 56
MI + G EE + SM+ + + + FT VLKAC + GK VH +
Sbjct: 113 MIAGYSQRGLNEEACGLFCSMINSCENWKLLVSDFTLATVLKACGGLGCSRIGKCVHGYA 172
Query: 57 LKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDE 116
+K+GF D FV + MY KC + D+ + + +V+WN++I+ +++ C +E
Sbjct: 173 VKIGFDSDLFVSGSTVYMYCKCGILDMAGLAFDQ--IENKDIVAWNTMITGYAQNCYEEE 230
Query: 117 AILVLKEMWVLGLELSASTFVSVVSGCSFRQ----GISMHCCVYKLGLLNNEIPLANSVM 172
AI + +M + G + + +TF V+ + G H V KLG + ++ +A +++
Sbjct: 231 AIELFYQMELEGFKPNDTTFCCVLKASTAMSDSAVGRCFHAKVLKLGC-SMDVFVATALV 289
Query: 173 SMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLV 232
MY+KF + + F E+ + ++VS+ +I GY +G EA + +Q++ + PD
Sbjct: 290 DMYSKFYDIEDVERAFGEMSKRNLVSFNALITGYSLMGKYEEALRVYSQLQSEGMEPDSF 349
Query: 233 VFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAV 292
F+ L C+ + +H +K G +++ + N +V+ Y+KCG + A F+++
Sbjct: 350 TFVGLFSSCSVSSTVAEGAQVHVHSVKFGLDSDVSVGNSIVNFYSKCGFTDSALEAFESI 409
Query: 293 LEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGK 352
+ W +I G+AQ G +A+ F ++ K + +E + ++ + A + ++ +G+
Sbjct: 410 NRPNSVCWAGIISGFAQNGEGEKALMQFCKMRKFIDKTDEFSSSSVIKAVSSWAAVEQGR 469
Query: 353 EIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHG 412
+ +++ +GL+ V +++I M+SKCG + A++VF +P+K++ W++MI GYA +G
Sbjct: 470 HLHAHVMKSGLDCTIYVGSAVIDMYSKCGMVEDAQKVFSVMPEKNVVSWNSMITGYAQNG 529
Query: 413 MGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEH 472
+AL LF +M G+ P AV + IL ACSH+G+V++G +F+ M N+GI PS+EH
Sbjct: 530 FCKEALLLFQEMTS-SGILPTAVTFVGILFACSHAGLVEEGRNFYNLMVHNYGIPPSMEH 588
Query: 473 YLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLN 532
C+VDLLGRAG + A + + +W LLSAC H N ++G AA++ L L
Sbjct: 589 CTCMVDLLGRAGYLEEAEAFLLSSSFSKEPGIWGSLLSACGVHKNSDVGSRAAQHCLFLE 648
Query: 533 PGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVE 577
P + +Y ++N++ S +W E + R LM D + KEPG S +E
Sbjct: 649 PHYSSSYTALSNIYASKELWSEVSRIRDLMKDMGVEKEPGCSWIE 693
Score = 206 bits (523), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 146/521 (28%), Positives = 257/521 (49%), Gaps = 20/521 (3%)
Query: 2 IRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGF 61
I ++ G ++ LS + ML+ G+ N+ T+ + ACA +H +LK GF
Sbjct: 13 ITDNARRGLVDQALSCFLQMLRAGIEPNAITYSATISACAQSTRPSLATSLHCLILKKGF 72
Query: 62 QQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVL 121
FV +GLI MYSK +R + D+MP R VSWNS+I+ +S+ LN+EA +
Sbjct: 73 SNQLFVSSGLISMYSKHDRIKEARFLFDDMPE--RDDVSWNSMIAGYSQRGLNEEACGLF 130
Query: 122 KEM------WVLGLELSASTFVSVVS-----GCSFRQGISMHCCVYKLGLLNNEIPLANS 170
M W L +S T +V+ GCS R G +H K+G ++++ ++ S
Sbjct: 131 CSMINSCENW--KLLVSDFTLATVLKACGGLGCS-RIGKCVHGYAVKIG-FDSDLFVSGS 186
Query: 171 VMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPD 230
+ MY K G ++ A FD+I IV+W T+I GY EA L QM P+
Sbjct: 187 TVYMYCKCGILDMAGLAFDQIENKDIVAWNTMITGYAQNCYEEEAIELFYQMELEGFKPN 246
Query: 231 LVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFD 290
F ++ + + + H+ +LK G + + + LV MY+K D+E R F
Sbjct: 247 DTTFCCVLKASTAMSDSAVGRCFHAKVLKLGCSMDVFVATALVDMYSKFYDIEDVERAFG 306
Query: 291 AVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSK 350
+ ++++ + ++I GY+ +G EA+ ++ +L + P+ T S+C+ ++++
Sbjct: 307 EMSKRNLVSFNALITGYSLMGKYEEALRVYSQLQSEGMEPDSFTFVGLFSSCSVSSTVAE 366
Query: 351 GKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAI 410
G ++ + V GL+S+ V S+++ +SKCG + A E FE + + W+ +I+G+A
Sbjct: 367 GAQVHVHSVKFGLDSDVSVGNSIVNFYSKCGFTDSALEAFESINRPNSVCWAGIISGFAQ 426
Query: 411 HGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSI 470
+G G++AL F KM+ K D +S++ A S V+ G + + G++ +I
Sbjct: 427 NGEGEKALMQFCKMRKFID-KTDEFSSSSVIKAVSSWAAVEQGRHLHAHVMKS-GLDCTI 484
Query: 471 EHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSA 511
++D+ + G + A K MP E W +++
Sbjct: 485 YVGSAVIDMYSKCGMVEDAQKVFSVMP-EKNVVSWNSMITG 524
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 122/428 (28%), Positives = 217/428 (50%), Gaps = 22/428 (5%)
Query: 97 SVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGC--SFRQGI--SMH 152
+VV W S I+ ++R L D+A+ +M G+E +A T+ + +S C S R + S+H
Sbjct: 5 NVVRWTSKITDNARRGLVDQALSCFLQMLRAGIEPNAITYSATISACAQSTRPSLATSLH 64
Query: 153 CCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNV 212
C + K G +N++ +++ ++SMY+K ++ EAR +FD++ E VSW ++I GY G
Sbjct: 65 CLILKKG-FSNQLFVSSGLISMYSKHDRIKEARFLFDDMPERDDVSWNSMIAGYSQRGLN 123
Query: 213 NEAFGL-------CNQMRRMSVTPDLVVFLNLI--LGCAQVGNLFLALSMHSLLLKSGYN 263
EA GL C + + L L LGC+++G +H +K G++
Sbjct: 124 EEACGLFCSMINSCENWKLLVSDFTLATVLKACGGLGCSRIGKC-----VHGYAVKIGFD 178
Query: 264 NEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRL 323
++ + V MY KCG L++A FD + K + W +MI GYAQ Y EA+ LF ++
Sbjct: 179 SDLFVSGSTVYMYCKCGILDMAGLAFDQIENKDIVAWNTMITGYAQNCYEEEAIELFYQM 238
Query: 324 LKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRI 383
+PN+ T L A + + G+ ++ G + V T+L+ M+SK I
Sbjct: 239 ELEGFKPNDTTFCCVLKASTAMSDSAVGRCFHAKVLKLGCSMDVFVATALVDMYSKFYDI 298
Query: 384 NKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSA 443
+ F + ++L ++A+I GY++ G ++AL ++ ++Q EG++PD+ + + S+
Sbjct: 299 EDVERAFGEMSKRNLVSFNALITGYSLMGKYEEALRVYSQLQS-EGMEPDSFTFVGLFSS 357
Query: 444 CSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQ 503
CS S V +G FG++ + +V+ + G D AL+ + +
Sbjct: 358 CSVSSTVAEGAQ-VHVHSVKFGLDSDVSVGNSIVNFYSKCGFTDSALEAFESIN-RPNSV 415
Query: 504 VWAPLLSA 511
WA ++S
Sbjct: 416 CWAGIISG 423
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 90/255 (35%), Positives = 144/255 (56%), Gaps = 5/255 (1%)
Query: 193 ETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALS 252
ET++V WT+ I G V++A QM R + P+ + + I CAQ LA S
Sbjct: 3 ETNVVRWTSKITDNARRGLVDQALSCFLQMLRAGIEPNAITYSATISACAQSTRPSLATS 62
Query: 253 MHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGY 312
+H L+LK G++N+ + + L+SMY+K ++ AR +FD + E+ W SMI GY+Q G
Sbjct: 63 LHCLILKKGFSNQLFVSSGLISMYSKHDRIKEARFLFDDMPERDDVSWNSMIAGYSQRGL 122
Query: 313 PSEAVNLFKRLLKT----SVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQ 368
EA LF ++ + + ++ TLAT L AC LG GK + Y V G +S+
Sbjct: 123 NEEACGLFCSMINSCENWKLLVSDFTLATVLKACGGLGCSRIGKCVHGYAVKIGFDSDLF 182
Query: 369 VQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVE 428
V S ++M+ KCG ++ A F+++ +KD+ W+ MI GYA + ++A+ LFY+M+ +E
Sbjct: 183 VSGSTVYMYCKCGILDMAGLAFDQIENKDIVAWNTMITGYAQNCYEEEAIELFYQME-LE 241
Query: 429 GLKPDAVVYTSILSA 443
G KP+ + +L A
Sbjct: 242 GFKPNDTTFCCVLKA 256
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 109/237 (45%), Gaps = 11/237 (4%)
Query: 292 VLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKG 351
+LE +V WTS I A+ G +A++ F ++L+ + PN T + T+SACA+ S
Sbjct: 1 MLETNVVRWTSKITDNARRGLVDQALSCFLQMLRAGIEPNAITYSATISACAQSTRPSLA 60
Query: 352 KEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIH 411
+ I+ G + V + LI M+SK RI +A+ +F+ +P++D W++MI GY+
Sbjct: 61 TSLHCLILKKGFSNQLFVSSGLISMYSKHDRIKEARFLFDDMPERDDVSWNSMIAGYSQR 120
Query: 412 GMGDQALNLFYKM-QHVEGLKPDAVVYT--SILSA-----CSHSGMVDDGLSFFKSMQSN 463
G+ ++A LF M E K +T ++L A CS G G + S+
Sbjct: 121 GLNEEACGLFCSMINSCENWKLLVSDFTLATVLKACGGLGCSRIGKCVHGYAVKIGFDSD 180
Query: 464 FGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVEL 520
+ S + C +L AG LA I + + C + +EL
Sbjct: 181 LFVSGSTVYMYCKCGILDMAG---LAFDQIENKDIVAWNTMITGYAQNCYEEEAIEL 234
>gi|449462994|ref|XP_004149219.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
gi|449500964|ref|XP_004161240.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
Length = 624
Score = 322 bits (824), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 163/457 (35%), Positives = 262/457 (57%), Gaps = 1/457 (0%)
Query: 165 IPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRR 224
+ +AN ++ MY + G + +A+ +FD + + SW+ I+GGY VGN F + ++ R
Sbjct: 85 LAVANKLLYMYVERGALEDAQELFDGMSKRHPYSWSVIVGGYAKVGNFFSCFWMFRELLR 144
Query: 225 MSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLEL 284
D +I C + +L +H + LK G + + LV MY +C +E
Sbjct: 145 SGAPLDDYSAPVVIRACRDLKDLKCGRLIHCITLKCGLDYGHFVCATLVDMYARCKVVED 204
Query: 285 ARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAE 344
A ++F + ++ + WT MIG A+ G P E++ F R+ + P++ L T + ACA+
Sbjct: 205 AHQIFVKMWKRDLATWTVMIGALAESGVPVESLVFFDRMRNQGIVPDKVALVTVVYACAK 264
Query: 345 LGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAM 404
LG+++K K I YI G + + T++I M++KCG + A+ +F+R+ +++ WSAM
Sbjct: 265 LGAMNKAKAIHAYINGTGYSLDVILGTAMIDMYAKCGSVESARWIFDRMQVRNVITWSAM 324
Query: 405 INGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNF 464
I Y HG G++AL LF M G+ P+ + + S+L ACSH+G++++G FF SM +
Sbjct: 325 IAAYGYHGQGEKALELF-PMMLRSGILPNRITFVSLLYACSHAGLIEEGQRFFSSMWDEY 383
Query: 465 GIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYA 524
G+ P ++HY C+VDLLGRAGR D AL+ I MPVE +W LL AC H +++L E
Sbjct: 384 GVTPDVKHYTCMVDLLGRAGRLDEALEMIEGMPVEKDEVLWGALLGACRIHRHLDLAERV 443
Query: 525 AKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQV 584
A++LL L G+Y+L++N++ +AG W++ A R LM L K PG + +E+ +
Sbjct: 444 ARSLLKLQSQKPGHYVLLSNIYANAGKWEDMAKTRDLMTKGGLRKIPGRTWIEVGEKLYQ 503
Query: 585 FVAGDRSHHLSVDIRKTLKELHIKLLEAGYIAEADIV 621
F GD++H S +I K LK L KL AGY + + V
Sbjct: 504 FGVGDKTHPRSNEIYKMLKRLGEKLEVAGYHPDTNDV 540
Score = 108 bits (271), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 79/342 (23%), Positives = 160/342 (46%), Gaps = 10/342 (2%)
Query: 9 GSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQ 68
G+F + +L++G + ++ P+V++AC ++ + G+ +H LK G FV
Sbjct: 130 GNFFSCFWMFRELLRSGAPLDDYSAPVVIRACRDLKDLKCGRLIHCITLKCGLDYGHFVC 189
Query: 69 TGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLG 128
L+DMY++C + ++ +M R + +W +I A + + + E+++ M G
Sbjct: 190 ATLVDMYARCKVVEDAHQIFVKM--WKRDLATWTVMIGALAESGVPVESLVFFDRMRNQG 247
Query: 129 LELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEA 184
+ V+VV C + + ++H + G + ++ L +++ MYAK G V A
Sbjct: 248 IVPDKVALVTVVYACAKLGAMNKAKAIHAYINGTG-YSLDVILGTAMIDMYAKCGSVESA 306
Query: 185 RSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQV 244
R IFD + ++++W+ +I Y G +A L M R + P+ + F++L+ C+
Sbjct: 307 RWIFDRMQVRNVITWSAMIAAYGYHGQGEKALELFPMMLRSGILPNRITFVSLLYACSHA 366
Query: 245 GNLFLALSMHSLLL-KSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAV-LEKSVFLWTS 302
G + S + + G + +V + + G L+ A + + + +EK LW +
Sbjct: 367 GLIEEGQRFFSSMWDEYGVTPDVKHYTCMVDLLGRAGRLDEALEMIEGMPVEKDEVLWGA 426
Query: 303 MIGGYAQLGYPSEAVNLFKRLLK-TSVRPNEATLATTLSACA 343
++G + A + + LLK S +P L + + A A
Sbjct: 427 LLGACRIHRHLDLAERVARSLLKLQSQKPGHYVLLSNIYANA 468
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 102/210 (48%), Gaps = 7/210 (3%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI +G E+L + M G+ + V+ ACA + ++ K +H+++ G
Sbjct: 223 MIGALAESGVPVESLVFFDRMRNQGIVPDKVALVTVVYACAKLGAMNKAKAIHAYINGTG 282
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+ D + T +IDMY+KC S+R + D M V R+V++W+++I+A+ ++A+ +
Sbjct: 283 YSLDVILGTAMIDMYAKCGSVESARWIFDRMQV--RNVITWSAMIAAYGYHGQGEKALEL 340
Query: 121 LKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
M G+ + TFVS++ CS +G ++ + ++ ++ +
Sbjct: 341 FPMMLRSGILPNRITFVSLLYACSHAGLIEEGQRFFSSMWDEYGVTPDVKHYTCMVDLLG 400
Query: 177 KFGKVNEARSIFDEIG-ETSIVSWTTIIGG 205
+ G+++EA + + + E V W ++G
Sbjct: 401 RAGRLDEALEMIEGMPVEKDEVLWGALLGA 430
>gi|357122034|ref|XP_003562721.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g25970-like [Brachypodium distachyon]
Length = 689
Score = 322 bits (824), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 191/581 (32%), Positives = 311/581 (53%), Gaps = 13/581 (2%)
Query: 20 SMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCS 79
+M GV N+F L++ A G ++ S K G + F + L+ MY+KC
Sbjct: 81 AMHAQGVAANTFALGSSLRSAAAARCPALGAQLQSLAFKSGLADNVFAASALLHMYAKCG 140
Query: 80 DFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSV 139
+R+V D MP R + VSWN++I+ + + +A+ + M L +TF ++
Sbjct: 141 RVRDARRVFDGMPER--NTVSWNALIAGYVESGKVLQALELFINMETERLVPDEATFAAL 198
Query: 140 VSGCSFRQGISMHCCVYKLGLLNNEIPL--ANSVMSMYAKFGKVNEARSIFDEIGET-SI 196
++ MH K+ + + L +N+ ++ Y++ G + E+R IFD+IG++ +
Sbjct: 199 LTAFDDSNYFLMHQLHGKIVKYGSALGLTVSNAAITAYSQCGALAESRRIFDQIGDSRDL 258
Query: 197 VSWTTIIGGYVNVGNVNEAFGLCNQMRRMS-VTPDLVVFLNLILGCAQVGNLFLALSMHS 255
+SW ++G Y G +A G +M R S V D+ F ++I C + + ++H
Sbjct: 259 ISWNAMLGAYTYHGMDYDAMGFFVRMIRESGVQLDMYSFTSIISTCPEHDD-HQGRAIHG 317
Query: 256 LLLKSGYNNEDPLDNLLVSMYTKCGD---LELARRVFDAVLEKSVFLWTSMIGGYAQLGY 312
L++K+G P+ N L++MYT+ +E A + FD++L K W SM+ GY+Q
Sbjct: 318 LVIKNGLEGATPVCNALIAMYTRISGNCMMEDACKCFDSLLIKDTVSWNSMLTGYSQHNL 377
Query: 313 PSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTS 372
++A+ F+ + ++R +E + L +C+EL L G++I I+ +G SN V +S
Sbjct: 378 SADALRFFRCMQSANIRCDEYAFSAALRSCSELAVLQLGRQIHGSIIHSGFASNNFVSSS 437
Query: 373 LIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKP 432
LI M+SK G ++ AK+ FE W++MI GYA HG +LF +M VE P
Sbjct: 438 LIFMYSKSGILDDAKKSFEEADKGSSVPWNSMIFGYAQHGHAHIVHSLFNEM--VELKVP 495
Query: 433 -DAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALK 491
D V + ++++CSH+G+VD+G +M++ +GI +EHY C VDL GRAG+ + A +
Sbjct: 496 LDHVTFVGLITSCSHAGLVDEGSEILNAMETRYGIPLRMEHYACGVDLYGRAGQLEKAKE 555
Query: 492 TIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGM 551
I MP E A VW LL AC H N+EL A +LL P YIL++++++ GM
Sbjct: 556 LIDSMPFEPDAMVWMTLLGACRIHGNMELASEVASHLLVSEPKQHSTYILLSSMYSGLGM 615
Query: 552 WKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSH 592
W + A + M +R L+K PGWS +E+ V F A DRSH
Sbjct: 616 WSDRAIVQREMKNRGLSKVPGWSWIEVKNEVHSFNAEDRSH 656
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 122/427 (28%), Positives = 211/427 (49%), Gaps = 22/427 (5%)
Query: 81 FVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFV--- 137
++R+V DE+P SWNS+++AH A + A +L+ M G ++A+TF
Sbjct: 41 LAAARRVFDEIP--RPDAASWNSLLTAHVSAGAHPAAWCLLRAMHAQG--VAANTFALGS 96
Query: 138 SVVSGCSFR---QGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGET 194
S+ S + R G + +K GL +N + A++++ MYAK G+V +AR +FD + E
Sbjct: 97 SLRSAAAARCPALGAQLQSLAFKSGLADN-VFAASALLHMYAKCGRVRDARRVFDGMPER 155
Query: 195 SIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMH 254
+ VSW +I GYV G V +A L M + PD F L L N FL +H
Sbjct: 156 NTVSWNALIAGYVESGKVLQALELFINMETERLVPDEATFAAL-LTAFDDSNYFLMHQLH 214
Query: 255 SLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLE-KSVFLWTSMIGGYAQLGYP 313
++K G + N ++ Y++CG L +RR+FD + + + + W +M+G Y G
Sbjct: 215 GKIVKYGSALGLTVSNAAITAYSQCGALAESRRIFDQIGDSRDLISWNAMLGAYTYHGMD 274
Query: 314 SEAVNLFKRLLKTS-VRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTS 372
+A+ F R+++ S V+ + + + +S C E +G+ I ++ NGLE V +
Sbjct: 275 YDAMGFFVRMIRESGVQLDMYSFTSIISTCPEHDD-HQGRAIHGLVIKNGLEGATPVCNA 333
Query: 373 LIHMFSKCG---RINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEG 429
LI M+++ + A + F+ + KD W++M+ GY+ H + AL F MQ
Sbjct: 334 LIAMYTRISGNCMMEDACKCFDSLLIKDTVSWNSMLTGYSQHNLSADALRFFRCMQSAN- 392
Query: 430 LKPDAVVYTSILSACSHSGMVDDGLSFFKS-MQSNFGIEPSIEHYLCLVDLLGRAGRFDL 488
++ D +++ L +CS ++ G S + S F + L+ + ++G D
Sbjct: 393 IRCDEYAFSAALRSCSELAVLQLGRQIHGSIIHSGFASNNFVSS--SLIFMYSKSGILDD 450
Query: 489 ALKTIHE 495
A K+ E
Sbjct: 451 AKKSFEE 457
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 95/194 (48%), Gaps = 1/194 (0%)
Query: 250 ALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQ 309
A H+ LLKS + + LL + L ARRVFD + W S++ +
Sbjct: 9 AAKSHATLLKSCIISPTRWNQLLTAYSLSPLGLAAARRVFDEIPRPDAASWNSLLTAHVS 68
Query: 310 LGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQV 369
G A L + + V N L ++L + A + G +++ +GL N
Sbjct: 69 AGAHPAAWCLLRAMHAQGVAANTFALGSSLRSAAAARCPALGAQLQSLAFKSGLADNVFA 128
Query: 370 QTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEG 429
++L+HM++KCGR+ A+ VF+ +P+++ W+A+I GY G QAL LF M+ E
Sbjct: 129 ASALLHMYAKCGRVRDARRVFDGMPERNTVSWNALIAGYVESGKVLQALELFINME-TER 187
Query: 430 LKPDAVVYTSILSA 443
L PD + ++L+A
Sbjct: 188 LVPDEATFAALLTA 201
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 93/220 (42%), Gaps = 31/220 (14%)
Query: 13 ETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLI 72
+ L + M + + + F L++C+ + + G+++H ++ GF + FV + LI
Sbjct: 380 DALRFFRCMQSANIRCDEYAFSAALRSCSELAVLQLGRQIHGSIIHSGFASNNFVSSSLI 439
Query: 73 DMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELS 132
MYSK ++K +E S V WNS+I +++ + EM L + L
Sbjct: 440 FMYSKSGILDDAKKSFEE--ADKGSSVPWNSMIFGYAQHGHAHIVHSLFNEMVELKVPLD 497
Query: 133 ASTFVSVVSGCSF----------------RQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
TFV +++ CS R GI + Y G+ +Y
Sbjct: 498 HVTFVGLITSCSHAGLVDEGSEILNAMETRYGIPLRMEHYACGV------------DLYG 545
Query: 177 KFGKVNEARSIFDEIG-ETSIVSWTTIIGGYVNVGNVNEA 215
+ G++ +A+ + D + E + W T++G GN+ A
Sbjct: 546 RAGQLEKAKELIDSMPFEPDAMVWMTLLGACRIHGNMELA 585
>gi|302800114|ref|XP_002981815.1| hypothetical protein SELMODRAFT_114918 [Selaginella moellendorffii]
gi|300150647|gb|EFJ17297.1| hypothetical protein SELMODRAFT_114918 [Selaginella moellendorffii]
Length = 637
Score = 322 bits (824), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 181/557 (32%), Positives = 298/557 (53%), Gaps = 10/557 (1%)
Query: 71 LIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGL- 129
++ YS+ + + RK DEMPV +VSWN++I+A+ D L + M + G+
Sbjct: 1 MLSAYSQIGNIPAVRKAFDEMPVA--DIVSWNALIAAYIGNRDFDRCWLFFRGMLLQGIN 58
Query: 130 --ELSASTFVSVVSGC-SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARS 186
E+ S F+S + G S+ + G+ I + +++SMY K G +A S
Sbjct: 59 PGEVGISIFLSACTDAREITIGRSIQLAILGTGIEEESI-VQTALVSMYGKLGHCTDAAS 117
Query: 187 IFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGN 246
+F + +V+W+ ++ Y G+ EA GL QM V P+ V ++ + CA +G+
Sbjct: 118 VFLRMSHRDVVAWSAMVAAYARNGHPREALGLFRQMDLDGVAPNKVTLVSGLDACASLGD 177
Query: 247 LFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGG 306
L MH + G + + LV++Y KCG +E A F ++EK+V W+++
Sbjct: 178 LRSGALMHQRVEAQGIQSGVVVGTALVNLYGKCGRIEAAVEAFGQIVEKNVVAWSAISAA 237
Query: 307 YAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEE--YIVLNGLE 364
YA+ +A+ + R+ + PN T + L ACA + +L +G+ I E ++ GLE
Sbjct: 238 YARNDRNRDAIRVLHRMDLEGLVPNSTTFVSVLDACAAIAALKQGRRIHERTQVLGGGLE 297
Query: 365 SNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKM 424
S+ V T+L++M+SKCG + A ++F+++ DL +W+++I A HG ++AL LF +M
Sbjct: 298 SDVYVLTALVNMYSKCGNLALAGDMFDKIAHLDLVLWNSLIATNAQHGQTEKALELFERM 357
Query: 425 QHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAG 484
+ +EGL+P + +TS+L ACSH+GM+D G F S + GI P EH+ C+VDLLGRAG
Sbjct: 358 R-LEGLQPTIITFTSVLFACSHAGMLDQGRKHFVSFIGDHGIFPEAEHFGCMVDLLGRAG 416
Query: 485 RFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMAN 544
+ + MP E W L AC + N++ +AA+NL L+P Y+L++N
Sbjct: 417 WIVDSEDLLLHMPFEPHPVAWMAFLGACRTYRNMDRAIWAAENLFQLDPRKRAPYVLLSN 476
Query: 545 LFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKE 604
++ AG W + A R M KE G S +E+ V F++GD H +I L+
Sbjct: 477 MYAKAGRWSDVARMRQAMQLFMTVKEAGRSWIEVKDRVHEFISGDLDHPRIGEIHAELQR 536
Query: 605 LHIKLLEAGYIAEADIV 621
L + EAGY+ + ++V
Sbjct: 537 LTKLMKEAGYVPDTEMV 553
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 107/433 (24%), Positives = 207/433 (47%), Gaps = 15/433 (3%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+I N F+ + ML G++ + L AC + I G+ + +L G
Sbjct: 32 LIAAYIGNRDFDRCWLFFRGMLLQGINPGEVGISIFLSACTDAREITIGRSIQLAILGTG 91
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
++++ VQT L+ MY K + V M R VV+W+++++A++R EA+ +
Sbjct: 92 IEEESIVQTALVSMYGKLGHCTDAASVFLRMS--HRDVVAWSAMVAAYARNGHPREALGL 149
Query: 121 LKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
++M + G+ + T VS + C+ R G MH V G + + + + +++++Y
Sbjct: 150 FRQMDLDGVAPNKVTLVSGLDACASLGDLRSGALMHQRVEAQG-IQSGVVVGTALVNLYG 208
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K G++ A F +I E ++V+W+ I Y +A + ++M + P+ F++
Sbjct: 209 KCGRIEAAVEAFGQIVEKNVVAWSAISAAYARNDRNRDAIRVLHRMDLEGLVPNSTTFVS 268
Query: 237 LILGCAQVGNLFLALSMH--SLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLE 294
++ CA + L +H + +L G ++ + LV+MY+KCG+L LA +FD +
Sbjct: 269 VLDACAAIAALKQGRRIHERTQVLGGGLESDVYVLTALVNMYSKCGNLALAGDMFDKIAH 328
Query: 295 KSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKG-KE 353
+ LW S+I AQ G +A+ LF+R+ ++P T + L AC+ G L +G K
Sbjct: 329 LDLVLWNSLIATNAQHGQTEKALELFERMRLEGLQPTIITFTSVLFACSHAGMLDQGRKH 388
Query: 354 IEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVP-DKDLAVWSAMINGYAIHG 412
+I +G+ + ++ + + G I ++++ +P + W A + +
Sbjct: 389 FVSFIGDHGIFPEAEHFGCMVDLLGRAGWIVDSEDLLLHMPFEPHPVAWMAFLGACRTYR 448
Query: 413 MGDQAL----NLF 421
D+A+ NLF
Sbjct: 449 NMDRAIWAAENLF 461
>gi|449522418|ref|XP_004168223.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g04370-like [Cucumis sativus]
Length = 743
Score = 321 bits (823), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 182/608 (29%), Positives = 320/608 (52%), Gaps = 9/608 (1%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+I + + G + S + M ++G+ S T +L I+ + +H ++ G
Sbjct: 121 IIGSYSREGDIDIAFSMFKQMRESGIQPTSVT---LLSLLPGISKLPLLLCLHCLIILHG 177
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F+ D + +++MY KC +R++ + + R +VSWNS++SA+S+ +E + +
Sbjct: 178 FESDLALSNSMVNMYGKCGRIADARRLFES--IGCRDIVSWNSLLSAYSKIGATEEILQL 235
Query: 121 LKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGL---LNNEIPLANSVMSMYAK 177
L+ M + ++ TF S +S + + + + V+ L L LN + + ++++ +Y +
Sbjct: 236 LQAMKIEDIKPDKQTFCSALSASAIKGDLRLGKLVHGLMLKDGLNIDQHVESALVVLYLR 295
Query: 178 FGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNL 237
++ A +F E +V WT +I G V ++A G+ QM +V P +
Sbjct: 296 CRCLDPAYKVFKSTTEKDVVMWTAMISGLVQNDCADKALGVFYQMIESNVKPSTATLASG 355
Query: 238 ILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSV 297
+ CAQ+G + S+H +L+ G + P N LV+MY KC L+ + +F+ ++EK +
Sbjct: 356 LAACAQLGCCDIGASIHGYVLRQGIMLDIPAQNSLVTMYAKCNKLQQSCSIFNKMVEKDL 415
Query: 298 FLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEY 357
W +++ G+A+ GY S+ + F + K+ +RP+ T+ + L AC G+L +GK I +
Sbjct: 416 VSWNAIVAGHAKNGYLSKGIFFFNEMRKSFLRPDSITVTSLLQACGSAGALCQGKWIHNF 475
Query: 358 IVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQA 417
++ + L +T+L+ M+ KCG + A++ F+ + +DL WS +I GY +G G+ A
Sbjct: 476 VLRSSLIPCIMTETALVDMYFKCGNLENAQKCFDCMLQRDLVAWSTLIVGYGFNGKGEIA 535
Query: 418 LNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLV 477
L + + G++P+ V++ S+LSACSH G++ GLS ++SM +F + P++EH C+V
Sbjct: 536 LRKYSEFLGT-GMEPNHVIFISVLSACSHGGLISKGLSIYESMTKDFRMSPNLEHRACVV 594
Query: 478 DLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTG 537
DLL RAG+ D A M E V LL AC + VELG+ A+++ L P G
Sbjct: 595 DLLSRAGKVDEAYSFYKMMFKEPSIVVLGMLLDACRVNGRVELGKVIARDMFELKPVDPG 654
Query: 538 NYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVD 597
N++ +AN + S W A M L K PGWS +E+ G+ F A SH
Sbjct: 655 NFVQLANSYASMSRWDGVEKAWTQMRSLGLKKYPGWSSIEVHGTTFTFFASHNSHPKIEK 714
Query: 598 IRKTLKEL 605
I T+K L
Sbjct: 715 IILTVKAL 722
Score = 263 bits (672), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 155/502 (30%), Positives = 273/502 (54%), Gaps = 5/502 (0%)
Query: 8 NGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFV 67
G+ + L TY SM +T +++TFP + KAC N+N G +H V+ G D+++
Sbjct: 27 QGAHHQVLQTYISMQKTHTQLDAYTFPSLFKACTNLNLFSHGLSLHQSVVVNGLSHDSYI 86
Query: 68 QTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVL 127
+ LI Y+K RKV D M R+VV W +II ++SR D A + K+M
Sbjct: 87 GSSLISFYAKFGCIHLGRKVFDTM--LKRNVVPWTTIIGSYSREGDIDIAFSMFKQMRES 144
Query: 128 GLELSASTFVSVVSGCSFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSI 187
G++ ++ T +S++ G S + C+ L +++ L+NS+++MY K G++ +AR +
Sbjct: 145 GIQPTSVTLLSLLPGISKLPLLLCLHCLIILHGFESDLALSNSMVNMYGKCGRIADARRL 204
Query: 188 FDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNL 247
F+ IG IVSW +++ Y +G E L M+ + PD F + + A G+L
Sbjct: 205 FESIGCRDIVSWNSLLSAYSKIGATEEILQLLQAMKIEDIKPDKQTFCSALSASAIKGDL 264
Query: 248 FLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGY 307
L +H L+LK G N + +++ LV +Y +C L+ A +VF + EK V +WT+MI G
Sbjct: 265 RLGKLVHGLMLKDGLNIDQHVESALVVLYLRCRCLDPAYKVFKSTTEKDVVMWTAMISGL 324
Query: 308 AQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNR 367
Q +A+ +F ++++++V+P+ ATLA+ L+ACA+LG G I Y++ G+ +
Sbjct: 325 VQNDCADKALGVFYQMIESNVKPSTATLASGLAACAQLGCCDIGASIHGYVLRQGIMLDI 384
Query: 368 QVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHV 427
Q SL+ M++KC ++ ++ +F ++ +KDL W+A++ G+A +G + + F +M+
Sbjct: 385 PAQNSLVTMYAKCNKLQQSCSIFNKMVEKDLVSWNAIVAGHAKNGYLSKGIFFFNEMRK- 443
Query: 428 EGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFD 487
L+PD++ TS+L AC +G + G + + + P I LVD+ + G +
Sbjct: 444 SFLRPDSITVTSLLQACGSAGALCQG-KWIHNFVLRSSLIPCIMTETALVDMYFKCGNLE 502
Query: 488 LALKTIHEMPVEVQAQVWAPLL 509
A K M ++ W+ L+
Sbjct: 503 NAQKCFDCM-LQRDLVAWSTLI 523
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 81/305 (26%), Positives = 155/305 (50%), Gaps = 28/305 (9%)
Query: 222 MRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGD 281
M++ D F +L C + LS+H ++ +G +++ + + L+S Y K G
Sbjct: 40 MQKTHTQLDAYTFPSLFKACTNLNLFSHGLSLHQSVVVNGLSHDSYIGSSLISFYAKFGC 99
Query: 282 LELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSA 341
+ L R+VFD +L+++V WT++IG Y++ G A ++FK++ ++ ++P TL + L
Sbjct: 100 IHLGRKVFDTMLKRNVVPWTTIIGSYSREGDIDIAFSMFKQMRESGIQPTSVTLLSLLPG 159
Query: 342 CAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVW 401
+ L + I+L+G ES+ + S+++M+ KCGRI A+ +FE + +D+ W
Sbjct: 160 ---ISKLPLLLCLHCLIILHGFESDLALSNSMVNMYGKCGRIADARRLFESIGCRDIVSW 216
Query: 402 SAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACS-----------HSGMV 450
+++++ Y+ G ++ L L M+ +E +KPD + S LSA + H M+
Sbjct: 217 NSLLSAYSKIGATEEILQLLQAMK-IEDIKPDKQTFCSALSASAIKGDLRLGKLVHGLML 275
Query: 451 DDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLS 510
DGL+ + ++S LV L R D A K + + E +W ++S
Sbjct: 276 KDGLNIDQHVES------------ALVVLYLRCRCLDPAYK-VFKSTTEKDVVMWTAMIS 322
Query: 511 ACMKH 515
+++
Sbjct: 323 GLVQN 327
>gi|297843412|ref|XP_002889587.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297335429|gb|EFH65846.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 558
Score = 321 bits (823), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 181/540 (33%), Positives = 299/540 (55%), Gaps = 19/540 (3%)
Query: 50 KRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHS 109
++VH+ V+ GFQ + + + L + Y + + + D +P R+ SWN+I+S +S
Sbjct: 24 QQVHAKVIIHGFQDEVVLGSSLTNAYIQSNRLDFATASFDRIPCWKRNRHSWNTILSGYS 83
Query: 110 RA--CLNDEAILVLKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNN 163
++ C + +L+ M + + V + C G+ +H K GL +
Sbjct: 84 KSKSCYYSDVLLLYNRMRRHCDGVDSFNLVFAIKACVGLGLLENGMLIHGLAMKNGLDKD 143
Query: 164 EIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMR 223
+ +A S++ MYA+FG + A+ +FDE+ + V W ++ GY+ +E F L MR
Sbjct: 144 DY-VAPSLVEMYAQFGTMESAQKVFDEMPVRNSVLWGVLMKGYLKYSKDSEVFRLFYLMR 202
Query: 224 RMSVTPDLVVFLNLILGCAQV-----GNLFLALSMH-SLLLKSGYNNEDPLDNLLVSMYT 277
+ D + + L+ C V G LS+ S + +SGY L+ ++ MY
Sbjct: 203 DTGLALDALTLICLVKACGNVSAGKEGKCVHGLSIRRSFIDQSGY-----LEASIIDMYV 257
Query: 278 KCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLAT 337
KC L+ AR++F+ +E++V +WT++I G+A+ EA++LF+++L S+ PN TLA
Sbjct: 258 KCRLLDNARKLFETSVERNVVMWTTLISGFAKCERAVEAIDLFRQMLGESILPNHCTLAA 317
Query: 338 TLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKD 397
L +C+ LGSL GK + Y++ NG+E + TS I +++CG I A++VF+ +P ++
Sbjct: 318 ILVSCSSLGSLRHGKSVHGYMIRNGIEMDAVNFTSFIDTYARCGNIQMARKVFDMMPKRN 377
Query: 398 LAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFF 457
+ WS+MIN + I+G+ ++AL+ F M+ + L P++V + S+LSACSHSG V +G F
Sbjct: 378 VISWSSMINAFGINGLFEEALDCFDNMKS-QNLVPNSVTFVSLLSACSHSGNVKEGWKQF 436
Query: 458 KSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHN 517
+SM ++G+ P EHY C+VDLLGRAG A I MPV+ A W LLSAC H
Sbjct: 437 ESMTRDYGLVPEEEHYACMVDLLGRAGEIGEAKSFIDNMPVKPMASAWGALLSACRIHKE 496
Query: 518 VELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVE 577
V+L A+ LL++ P + Y+L++N++ AGMW+ R M + K G S E
Sbjct: 497 VDLAGEIAEKLLSMEPDESSVYVLLSNIYADAGMWEMVNCVRHKMGIKGYRKPMGLSATE 556
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 118/446 (26%), Positives = 221/446 (49%), Gaps = 12/446 (2%)
Query: 11 FEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTG 70
+ + L Y+ M + +SF +KAC + + +G +H +K G +D +V
Sbjct: 90 YSDVLLLYNRMRRHCDGVDSFNLVFAIKACVGLGLLENGMLIHGLAMKNGLDKDDYVAPS 149
Query: 71 LIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLE 130
L++MY++ S++KV DEMPV R+ V W ++ + + + E + M GL
Sbjct: 150 LVEMYAQFGTMESAQKVFDEMPV--RNSVLWGVLMKGYLKYSKDSEVFRLFYLMRDTGLA 207
Query: 131 LSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARS 186
L A T + +V C + ++G +H + ++ L S++ MY K ++ AR
Sbjct: 208 LDALTLICLVKACGNVSAGKEGKCVHGLSIRRSFIDQSGYLEASIIDMYVKCRLLDNARK 267
Query: 187 IFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGN 246
+F+ E ++V WTT+I G+ EA L QM S+ P+ +++ C+ +G+
Sbjct: 268 LFETSVERNVVMWTTLISGFAKCERAVEAIDLFRQMLGESILPNHCTLAAILVSCSSLGS 327
Query: 247 LFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGG 306
L S+H ++++G + + Y +CG++++AR+VFD + +++V W+SMI
Sbjct: 328 LRHGKSVHGYMIRNGIEMDAVNFTSFIDTYARCGNIQMARKVFDMMPKRNVISWSSMINA 387
Query: 307 YAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKG-KEIEEYIVLNGLES 365
+ G EA++ F + ++ PN T + LSAC+ G++ +G K+ E GL
Sbjct: 388 FGINGLFEEALDCFDNMKSQNLVPNSVTFVSLLSACSHSGNVKEGWKQFESMTRDYGLVP 447
Query: 366 NRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLA-VWSAMINGYAIHGMGDQALNLFYKM 424
+ ++ + + G I +AK + +P K +A W A+++ IH D A + K+
Sbjct: 448 EEEHYACMVDLLGRAGEIGEAKSFIDNMPVKPMASAWGALLSACRIHKEVDLAGEIAEKL 507
Query: 425 QHVEGLKPD-AVVYTSILSACSHSGM 449
+E PD + VY + + + +GM
Sbjct: 508 LSME---PDESSVYVLLSNIYADAGM 530
Score = 43.9 bits (102), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 51/101 (50%), Gaps = 2/101 (1%)
Query: 8 NGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDG-KRVHSHVLKVGFQQDAF 66
NG FEE L + +M + NS TF +L AC++ ++ +G K+ S G +
Sbjct: 391 NGLFEEALDCFDNMKSQNLVPNSVTFVSLLSACSHSGNVKEGWKQFESMTRDYGLVPEEE 450
Query: 67 VQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISA 107
++D+ + + ++ +D MPV+ + +W +++SA
Sbjct: 451 HYACMVDLLGRAGEIGEAKSFIDNMPVKPMA-SAWGALLSA 490
>gi|125597850|gb|EAZ37630.1| hypothetical protein OsJ_21964 [Oryza sativa Japonica Group]
Length = 583
Score = 321 bits (823), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 161/455 (35%), Positives = 266/455 (58%), Gaps = 2/455 (0%)
Query: 167 LANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMS 226
L +++MY + G +++AR++ D + E S+VSWTT+I GY EA L +M R
Sbjct: 47 LGTRLVTMYVRCGALDDARNVLDRMPERSVVSWTTMISGYSQTERHVEALDLFIKMLRAG 106
Query: 227 VTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELAR 286
P+ ++ C+ +++ +HSLL+K+ + + + + L+ MY K +++ AR
Sbjct: 107 CIPNEYTLATVLTSCSGPQSIYQGKQVHSLLVKTNFESHMFVGSSLLDMYAKSENIQEAR 166
Query: 287 RVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELG 346
RVFD + E+ V T++I GYAQ G EA++LF++L ++ N T T ++A + L
Sbjct: 167 RVFDTLPERDVVSCTAIISGYAQKGLDEEALDLFRQLYSEGMQCNHVTFTTLVTALSGLA 226
Query: 347 SLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMIN 406
SL GK++ I+ L +Q SLI M+SKCG++ ++ VF+ + ++ + W+AM+
Sbjct: 227 SLDYGKQVHALILRKELPFFVALQNSLIDMYSKCGKLLYSRRVFDNMLERSVVSWNAMLM 286
Query: 407 GYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGI 466
GY HG+G + ++LF + H E +KPD+V ++LS CSH G+VD+GL F ++
Sbjct: 287 GYGRHGLGHEVISLFKDL-HKE-VKPDSVTLLAVLSGCSHGGLVDEGLDIFDTVVKEQSA 344
Query: 467 EPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAK 526
HY C++DLLGR+GR + AL I MP E +W LL AC H NV +GE A+
Sbjct: 345 LLHTGHYGCIIDLLGRSGRLEKALNLIENMPFESTPSIWGSLLGACRVHANVHVGELVAQ 404
Query: 527 NLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFV 586
LL + P + GNY++++N++ +AGMWK+ R LM ++ +TKEPG S + +D + F
Sbjct: 405 KLLEMEPENAGNYVILSNIYAAAGMWKDVFKVRKLMLEKTVTKEPGQSWIILDKVIHTFH 464
Query: 587 AGDRSHHLSVDIRKTLKELHIKLLEAGYIAEADIV 621
+ +R H DI +KE+ + + AG++ + V
Sbjct: 465 SSERFHPSKKDINAKIKEIFVDIKAAGFVPDLSCV 499
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 123/405 (30%), Positives = 207/405 (51%), Gaps = 24/405 (5%)
Query: 21 MLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSD 80
M G + + AC ++W+G++VH+ ++ ++ F+ T L+ MY +C
Sbjct: 1 MALPGASARFHEYEAAITACIERRALWEGRQVHARMITARYRPAVFLGTRLVTMYVRCGA 60
Query: 81 FVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVV 140
+R VLD MP RSVVSW ++IS +S+ + EA+ + +M G + T +V+
Sbjct: 61 LDDARNVLDRMPE--RSVVSWTTMISGYSQTERHVEALDLFIKMLRAGCIPNEYTLATVL 118
Query: 141 SGCSFRQGISMHCCVYKLGLLNN---EIPLANSVMSMYAKFGKVNEARSIFDEIGETSIV 197
+ CS Q I V+ L + N + + +S++ MYAK + EAR +FD + E +V
Sbjct: 119 TSCSGPQSIYQGKQVHSLLVKTNFESHMFVGSSLLDMYAKSENIQEARRVFDTLPERDVV 178
Query: 198 SWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLL 257
S T II GY G EA L Q+ + + V F L+ + + +L +H+L+
Sbjct: 179 SCTAIISGYAQKGLDEEALDLFRQLYSEGMQCNHVTFTTLVTALSGLASLDYGKQVHALI 238
Query: 258 LKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAV 317
L+ L N L+ MY+KCG L +RRVFD +LE+SV W +M+ GY + G E +
Sbjct: 239 LRKELPFFVALQNSLIDMYSKCGKLLYSRRVFDNMLERSVVSWNAMLMGYGRHGLGHEVI 298
Query: 318 NLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIH-- 375
+LFK L K V+P+ TL LS C+ G + +G +I + +V + Q++L+H
Sbjct: 299 SLFKDLHK-EVKPDSVTLLAVLSGCSHGGLVDEGLDIFDTVV--------KEQSALLHTG 349
Query: 376 -------MFSKCGRINKAKEVFERVP-DKDLAVWSAMINGYAIHG 412
+ + GR+ KA + E +P + ++W +++ +H
Sbjct: 350 HYGCIIDLLGRSGRLEKALNLIENMPFESTPSIWGSLLGACRVHA 394
Score = 148 bits (374), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 87/289 (30%), Positives = 160/289 (55%), Gaps = 25/289 (8%)
Query: 238 ILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSV 297
I C + L+ +H+ ++ + Y L LV+MY +CG L+ AR V D + E+SV
Sbjct: 17 ITACIERRALWEGRQVHARMITARYRPAVFLGTRLVTMYVRCGALDDARNVLDRMPERSV 76
Query: 298 FLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEY 357
WT+MI GY+Q EA++LF ++L+ PNE TLAT L++C+ S+ +GK++
Sbjct: 77 VSWTTMISGYSQTERHVEALDLFIKMLRAGCIPNEYTLATVLTSCSGPQSIYQGKQVHSL 136
Query: 358 IVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQA 417
+V ES+ V +SL+ M++K I +A+ VF+ +P++D+ +A+I+GYA G+ ++A
Sbjct: 137 LVKTNFESHMFVGSSLLDMYAKSENIQEARRVFDTLPERDVVSCTAIISGYAQKGLDEEA 196
Query: 418 LNLFYKMQHVEGLKPDAVVYTSILSACS-----------HSGMVDDGLSFFKSMQSNFGI 466
L+LF ++ + EG++ + V +T++++A S H+ ++ L FF ++Q++
Sbjct: 197 LDLFRQL-YSEGMQCNHVTFTTLVTALSGLASLDYGKQVHALILRKELPFFVALQNS--- 252
Query: 467 EPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKH 515
L+D+ + G+ + + M +E W +L +H
Sbjct: 253 ---------LIDMYSKCGKLLYSRRVFDNM-LERSVVSWNAMLMGYGRH 291
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 94/318 (29%), Positives = 166/318 (52%), Gaps = 22/318 (6%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI + E L + ML+ G N +T VL +C+ SI+ GK+VHS ++K
Sbjct: 82 MISGYSQTERHVEALDLFIKMLRAGCIPNEYTLATVLTSCSGPQSIYQGKQVHSLLVKTN 141
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F+ FV + L+DMY+K + +R+V D +P R VVS +IIS +++ L++EA+ +
Sbjct: 142 FESHMFVGSSLLDMYAKSENIQEARRVFDTLPE--RDVVSCTAIISGYAQKGLDEEALDL 199
Query: 121 LKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGLLNNEIP----LANSVMSMYA 176
++++ G++ + TF ++V+ S + V+ L +L E+P L NS++ MY+
Sbjct: 200 FRQLYSEGMQCNHVTFTTLVTALSGLASLDYGKQVHAL-ILRKELPFFVALQNSLIDMYS 258
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K GK+ +R +FD + E S+VSW ++ GY G +E L + + V PD V L
Sbjct: 259 KCGKLLYSRRVFDNMLERSVVSWNAMLMGYGRHGLGHEVISLFKDLHK-EVKPDSVTLLA 317
Query: 237 LILGCAQVG------NLF-LALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVF 289
++ GC+ G ++F + S LL +G+ ++ + + G LE A +
Sbjct: 318 VLSGCSHGGLVDEGLDIFDTVVKEQSALLHTGHY------GCIIDLLGRSGRLEKALNLI 371
Query: 290 DAV-LEKSVFLWTSMIGG 306
+ + E + +W S++G
Sbjct: 372 ENMPFESTPSIWGSLLGA 389
>gi|357118938|ref|XP_003561204.1| PREDICTED: pentatricopeptide repeat-containing protein At2g35030,
mitochondrial-like [Brachypodium distachyon]
Length = 618
Score = 321 bits (823), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 186/561 (33%), Positives = 309/561 (55%), Gaps = 21/561 (3%)
Query: 62 QQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVL 121
+D T L+ Y+ C + + L + P R+VV+W +++S ++RA DEA +
Sbjct: 63 DRDVVSWTALVAAYA-CQGMLHDARALFDRPDARRNVVTWTALLSGYARAGRVDEAEALF 121
Query: 122 KEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKV 181
M E + ++ +++ + + C ++ G+ + N +++ + G +
Sbjct: 122 GRM----PERNVVSWNTMLEAYTSSGRVGDACTLFN-GMPVRDAGSWNILLAALVRSGNI 176
Query: 182 NEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGC 241
++AR +FD + E ++++WTT++ G G+VNEA L + M +V V + +I G
Sbjct: 177 DKARKLFDRMPERNVMAWTTMVAGIARSGSVNEARALFDGMPERNV----VSWNAMISGY 232
Query: 242 AQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWT 301
A+ + A H L +K + N++++ + + +LE A+ +FD + ++V WT
Sbjct: 233 ARNHMIDEA---HDLFMKMPTRDIASW-NIMITGFIQNKNLERAQELFDKMPRRNVVTWT 288
Query: 302 SMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLN 361
+M+ GY Q A+ LF +L +RPN+ T + AC+ L LS+G+++ + I
Sbjct: 289 TMMNGYLQSIQSETALQLFNGMLIDGIRPNQVTFLGAVDACSNLAGLSEGQQVHQMICKT 348
Query: 362 GLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLF 421
+ + ++++L+++++KCG I A++VF +KD+ W+ MI YA HG+G +A++L+
Sbjct: 349 PFQFDTFIESTLMNLYAKCGEIILARKVFNLSKEKDVISWNGMIAAYAHHGVGLEAIHLY 408
Query: 422 YKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLG 481
KMQ G KP+ V Y +LSACSHSG+VD+GL F+ M + I EHY CL+DL
Sbjct: 409 EKMQE-NGYKPNDVTYVGLLSACSHSGLVDEGLRIFEYMVKDRSIAVRDEHYTCLIDLCS 467
Query: 482 RAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYIL 541
RAGR A + IH + VE + VW LL C H N +G+ AA+NLL P + G Y L
Sbjct: 468 RAGRLGDAKRLIHFLKVEPSSTVWNALLGGCNSHGNESIGDLAARNLLEAEPNNAGTYTL 527
Query: 542 MANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKT 601
+ N++ SAG WKEAA R M+DR L K+PG S +E+ V VFV+ D+SH S I
Sbjct: 528 LCNIYASAGKWKEAAKIRSEMNDRGLKKQPGCSWIEVANKVHVFVSRDKSHSESDLINSL 587
Query: 602 LKELHIKLLEAGYIAEADIVP 622
L+++H + AD VP
Sbjct: 588 LQDIH------DIMRMADTVP 602
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 95/390 (24%), Positives = 187/390 (47%), Gaps = 48/390 (12%)
Query: 161 LNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCN 220
++N + N ++ A G+V++AR +FD + +VSWT ++ Y G +++A L +
Sbjct: 31 VSNHVQDPNRRVAELAAAGRVSDARRLFDRTPDRDVVSWTALVAAYACQGMLHDARALFD 90
Query: 221 QMRRMSVTPDLVVFLNLILGCAQVGNLFLA------------LSMHSLL---LKSG---- 261
R ++V + L+ G A+ G + A +S +++L SG
Sbjct: 91 ---RPDARRNVVTWTALLSGYARAGRVDEAEALFGRMPERNVVSWNTMLEAYTSSGRVGD 147
Query: 262 ----YNNEDPLD----NLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYP 313
+N D N+L++ + G+++ AR++FD + E++V WT+M+ G A+ G
Sbjct: 148 ACTLFNGMPVRDAGSWNILLAALVRSGNIDKARKLFDRMPERNVMAWTTMVAGIARSGSV 207
Query: 314 SEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQT-- 371
+EA LF + + +V +S A + ++ I+E L R + +
Sbjct: 208 NEARALFDGMPERNV----------VSWNAMISGYARNHMIDEAHDLFMKMPTRDIASWN 257
Query: 372 SLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLK 431
+I F + + +A+E+F+++P +++ W+ M+NGY + AL LF M ++G++
Sbjct: 258 IMITGFIQNKNLERAQELFDKMPRRNVVTWTTMMNGYLQSIQSETALQLFNGML-IDGIR 316
Query: 432 PDAVVYTSILSACSHSGMVDDGLSFFKSM-QSNFGIEPSIEHYLCLVDLLGRAGRFDLAL 490
P+ V + + ACS+ + +G + + ++ F + IE L++L + G LA
Sbjct: 317 PNQVTFLGAVDACSNLAGLSEGQQVHQMICKTPFQFDTFIES--TLMNLYAKCGEIILAR 374
Query: 491 KTIHEMPVEVQAQVWAPLLSACMKHHNVEL 520
K + + E W +++A HH V L
Sbjct: 375 K-VFNLSKEKDVISWNGMIAA-YAHHGVGL 402
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 112/205 (54%), Gaps = 7/205 (3%)
Query: 12 EETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGL 71
E L ++ ML G+ N TF + AC+N+ + +G++VH + K FQ D F+++ L
Sbjct: 301 ETALQLFNGMLIDGIRPNQVTFLGAVDACSNLAGLSEGQQVHQMICKTPFQFDTFIESTL 360
Query: 72 IDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLEL 131
+++Y+KC + + +RKV + + + V+SWN +I+A++ + EAI + ++M G +
Sbjct: 361 MNLYAKCGEIILARKVFN--LSKEKDVISWNGMIAAYAHHGVGLEAIHLYEKMQENGYKP 418
Query: 132 SASTFVSVVSGCSFRQGISMHCCVYKLGLLNNEIPLANS----VMSMYAKFGKVNEARSI 187
+ T+V ++S CS + +++ + + I + + ++ + ++ G++ +A+ +
Sbjct: 419 NDVTYVGLLSACSHSGLVDEGLRIFEYMVKDRSIAVRDEHYTCLIDLCSRAGRLGDAKRL 478
Query: 188 FDEIG-ETSIVSWTTIIGGYVNVGN 211
+ E S W ++GG + GN
Sbjct: 479 IHFLKVEPSSTVWNALLGGCNSHGN 503
>gi|255578965|ref|XP_002530335.1| Bipolar kinesin KRP-130, putative [Ricinus communis]
gi|223530139|gb|EEF32051.1| Bipolar kinesin KRP-130, putative [Ricinus communis]
Length = 1530
Score = 321 bits (823), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 160/445 (35%), Positives = 264/445 (59%), Gaps = 4/445 (0%)
Query: 134 STFVSVVSGCSFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGE 193
ST ++ + C +Q +H + +L N + +AN ++ +Y + +A ++FDE+ +
Sbjct: 1087 STLLNCKNICQIKQ---LHALITTNSVLYNNLTVANKLLYVYVHHKCLTDAYALFDEMPQ 1143
Query: 194 TSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSM 253
+ VSW+ +IGG+V VG + + ++ R V PD +I C L + +
Sbjct: 1144 KNPVSWSIMIGGFVKVGEFMQCYKTFKELIRNGVQPDNYTLPFVIKACRDTVALDMGRLI 1203
Query: 254 HSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYP 313
H ++LK G + + + LV MY KC +E A+ +FD + K + WT MIGGYA+ G
Sbjct: 1204 HCVVLKYGLHLDHFVCAALVDMYAKCKVIEDAKLLFDVMPSKDLVTWTVMIGGYAECGNA 1263
Query: 314 SEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSL 373
E++ LF L + P++ + + ++ACA+LG+++K + + EY+ N + + T++
Sbjct: 1264 KESLVLFDHLREEGFVPDKIAMVSIVNACAKLGAMNKARFVHEYVNRNRFSLDVILGTAM 1323
Query: 374 IHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPD 433
I M++KCG ++ A+E+F+ + K++ WSAMI Y HG G +AL LF M G+ P+
Sbjct: 1324 IDMYAKCGDVDSAREIFDNMHHKNVISWSAMIAAYGYHGQGKKALELF-PMMLSSGILPN 1382
Query: 434 AVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTI 493
+ + S+L ACSH+G+V+DGL+ M +FG+ P I+H+ C+VDLLGRAG+ A + I
Sbjct: 1383 NITFVSLLYACSHAGLVEDGLTLLSLMWESFGVRPDIKHHTCMVDLLGRAGQLTEAFRFI 1442
Query: 494 HEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWK 553
M VE +W+ LL AC H ++L E AAK+LL L P + GNYIL++N++ +AG WK
Sbjct: 1443 ENMTVEKDEGLWSSLLGACRIHKRIDLAEKAAKSLLELQPQNPGNYILLSNIYANAGQWK 1502
Query: 554 EAATARGLMDDRRLTKEPGWSQVEI 578
+ A R LM R+L K PG++ +E+
Sbjct: 1503 DVAKIRDLMTKRKLKKIPGYTWIEL 1527
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 81/303 (26%), Positives = 153/303 (50%), Gaps = 7/303 (2%)
Query: 9 GSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQ 68
G F + T+ +++ GV +++T P V+KAC + ++ G+ +H VLK G D FV
Sbjct: 1160 GEFMQCYKTFKELIRNGVQPDNYTLPFVIKACRDTVALDMGRLIHCVVLKYGLHLDHFVC 1219
Query: 69 TGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLG 128
L+DMY+KC ++ + D MP + +V+W +I ++ E++++ + G
Sbjct: 1220 AALVDMYAKCKVIEDAKLLFDVMPS--KDLVTWTVMIGGYAECGNAKESLVLFDHLREEG 1277
Query: 129 LELSASTFVSVVSGCSFRQGISMHCCVYKLGLLNN---EIPLANSVMSMYAKFGKVNEAR 185
VS+V+ C+ ++ V++ N ++ L +++ MYAK G V+ AR
Sbjct: 1278 FVPDKIAMVSIVNACAKLGAMNKARFVHEYVNRNRFSLDVILGTAMIDMYAKCGDVDSAR 1337
Query: 186 SIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVG 245
IFD + +++SW+ +I Y G +A L M + P+ + F++L+ C+ G
Sbjct: 1338 EIFDNMHHKNVISWSAMIAAYGYHGQGKKALELFPMMLSSGILPNNITFVSLLYACSHAG 1397
Query: 246 NLFLALSMHSLLLKS-GYNNEDPLDNLLVSMYTKCGDL-ELARRVFDAVLEKSVFLWTSM 303
+ L++ SL+ +S G + +V + + G L E R + + +EK LW+S+
Sbjct: 1398 LVEDGLTLLSLMWESFGVRPDIKHHTCMVDLLGRAGQLTEAFRFIENMTVEKDEGLWSSL 1457
Query: 304 IGG 306
+G
Sbjct: 1458 LGA 1460
>gi|356547226|ref|XP_003542017.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g37170-like [Glycine max]
Length = 693
Score = 321 bits (823), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 175/525 (33%), Positives = 285/525 (54%), Gaps = 36/525 (6%)
Query: 132 SASTFVSVVSGCSFRQGISMHCCVYKLGLLNNEIP---LANSVMSMYAKFGKVNEARSIF 188
SA + ++++ C + + + V+ +N +P ++N ++ MYAK G + +A+ +F
Sbjct: 86 SARVYSTLIAACVRHRALELGRRVHAHTKASNFVPGVFISNRLLDMYAKCGSLVDAQMLF 145
Query: 189 DEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQM-------------------------- 222
DE+G + SW T+I GY +G + +A L ++M
Sbjct: 146 DEMGHRDLCSWNTMIVGYAKLGRLEQARKLFDEMPQRDNFSWNAAISGYVTHNQPREALE 205
Query: 223 ------RRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMY 276
R + + + + A + L L +H L+++ N ++ + + L+ +Y
Sbjct: 206 LFRVMQRHERSSSNKFTLSSALAASAAIPCLRLGKEIHGYLIRTELNLDEVVWSALLDLY 265
Query: 277 TKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLA 336
KCG L+ AR +FD + ++ V WT+MI + G E LF+ L+++ VRPNE T A
Sbjct: 266 GKCGSLDEARGIFDQMKDRDVVSWTTMIHRCFEDGRREEGFLLFRDLMQSGVRPNEYTFA 325
Query: 337 TTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDK 396
L+ACA+ + GKE+ Y++ G + ++L+HM+SKCG A+ VF +
Sbjct: 326 GVLNACADHAAEHLGKEVHGYMMHAGYDPGSFAISALVHMYSKCGNTRVARRVFNEMHQP 385
Query: 397 DLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSF 456
DL W+++I GYA +G D+AL+ F+++ G KPD V Y +LSAC+H+G+VD GL +
Sbjct: 386 DLVSWTSLIVGYAQNGQPDEALH-FFELLLQSGTKPDQVTYVGVLSACTHAGLVDKGLEY 444
Query: 457 FKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHH 516
F S++ G+ + +HY C++DLL R+GRF A I MPV+ +WA LL C H
Sbjct: 445 FHSIKEKHGLMHTADHYACVIDLLARSGRFKEAENIIDNMPVKPDKFLWASLLGGCRIHG 504
Query: 517 NVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQV 576
N+EL + AAK L + P + YI +AN++ +AG+W E A R MD+ + K+PG S +
Sbjct: 505 NLELAKRAAKALYEIEPENPATYITLANIYANAGLWSEVANVRKDMDNMGIVKKPGKSWI 564
Query: 577 EIDGSVQVFVAGDRSHHLSVDIRKTLKELHIKLLEAGYIAEADIV 621
EI V VF+ GD SH + DI + L EL K+ E GY+ + + V
Sbjct: 565 EIKRQVHVFLVGDTSHPKTSDIHEFLGELSKKIKEEGYVPDTNFV 609
Score = 183 bits (464), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 128/472 (27%), Positives = 227/472 (48%), Gaps = 44/472 (9%)
Query: 33 FPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMP 92
+ ++ AC ++ G+RVH+H F F+ L+DMY+KC V ++ + DEM
Sbjct: 90 YSTLIAACVRHRALELGRRVHAHTKASNFVPGVFISNRLLDMYAKCGSLVDAQMLFDEMG 149
Query: 93 VRLRSVVSWNSIISAHSRACLNDEAILVLKEM-------WVLG-------------LEL- 131
R + SWN++I +++ ++A + EM W LEL
Sbjct: 150 --HRDLCSWNTMIVGYAKLGRLEQARKLFDEMPQRDNFSWNAAISGYVTHNQPREALELF 207
Query: 132 ---------SASTFVSVVSGCS------FRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
S++ F + + R G +H + + L +E+ + ++++ +Y
Sbjct: 208 RVMQRHERSSSNKFTLSSALAASAAIPCLRLGKEIHGYLIRTELNLDEV-VWSALLDLYG 266
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K G ++EAR IFD++ + +VSWTT+I G E F L + + V P+ F
Sbjct: 267 KCGSLDEARGIFDQMKDRDVVSWTTMIHRCFEDGRREEGFLLFRDLMQSGVRPNEYTFAG 326
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
++ CA L +H ++ +GY+ + LV MY+KCG+ +ARRVF+ + +
Sbjct: 327 VLNACADHAAEHLGKEVHGYMMHAGYDPGSFAISALVHMYSKCGNTRVARRVFNEMHQPD 386
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEE 356
+ WTS+I GYAQ G P EA++ F+ LL++ +P++ T LSAC G + KG E
Sbjct: 387 LVSWTSLIVGYAQNGQPDEALHFFELLLQSGTKPDQVTYVGVLSACTHAGLVDKGLEYFH 446
Query: 357 YIV-LNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDK-DLAVWSAMINGYAIHGMG 414
I +GL +I + ++ GR +A+ + + +P K D +W++++ G IHG
Sbjct: 447 SIKEKHGLMHTADHYACVIDLLARSGRFKEAENIIDNMPVKPDKFLWASLLGGCRIHGNL 506
Query: 415 DQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGI 466
+ A + +E P Y ++ + +++G+ + + K M N GI
Sbjct: 507 ELAKRAAKALYEIEPENP--ATYITLANIYANAGLWSEVANVRKDM-DNMGI 555
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 86/331 (25%), Positives = 151/331 (45%), Gaps = 16/331 (4%)
Query: 29 NSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVL 88
N FT L A A I + GK +H ++++ D V + L+D+Y KC +R +
Sbjct: 219 NKFTLSSALAASAAIPCLRLGKEIHGYLIRTELNLDEVVWSALLDLYGKCGSLDEARGIF 278
Query: 89 DEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCSFRQ- 147
D+M + R VVSW ++I +E L+ +++ G+ + TF V++ C+
Sbjct: 279 DQM--KDRDVVSWTTMIHRCFEDGRREEGFLLFRDLMQSGVRPNEYTFAGVLNACADHAA 336
Query: 148 ---GISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIG 204
G +H + G ++ +++ MY+K G AR +F+E+ + +VSWT++I
Sbjct: 337 EHLGKEVHGYMMHAGYDPGSFAIS-ALVHMYSKCGNTRVARRVFNEMHQPDLVSWTSLIV 395
Query: 205 GYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALS-MHSLLLKSGYN 263
GY G +EA + + PD V ++ ++ C G + L HS+ K G
Sbjct: 396 GYAQNGQPDEALHFFELLLQSGTKPDQVTYVGVLSACTHAGLVDKGLEYFHSIKEKHGLM 455
Query: 264 NEDPLDNLLVSMYTKCGDLELARRVFDAV-LEKSVFLWTSMIGGYAQLGYPSEAVNLFKR 322
+ ++ + + G + A + D + ++ FLW S++GG G + L KR
Sbjct: 456 HTADHYACVIDLLARSGRFKEAENIIDNMPVKPDKFLWASLLGGCRIHG----NLELAKR 511
Query: 323 LLKT--SVRP-NEATLATTLSACAELGSLSK 350
K + P N AT T + A G S+
Sbjct: 512 AAKALYEIEPENPATYITLANIYANAGLWSE 542
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 82/321 (25%), Positives = 141/321 (43%), Gaps = 45/321 (14%)
Query: 218 LCNQMR---------RMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPL 268
LC Q R R P V+ LI C + L L +H+ S + +
Sbjct: 65 LCQQKRVKEAVELLHRTDHRPSARVYSTLIAACVRHRALELGRRVHAHTKASNFVPGVFI 124
Query: 269 DNLLVSMYTKCGD-------------------------------LELARRVFDAVLEKSV 297
N L+ MY KCG LE AR++FD + ++
Sbjct: 125 SNRLLDMYAKCGSLVDAQMLFDEMGHRDLCSWNTMIVGYAKLGRLEQARKLFDEMPQRDN 184
Query: 298 FLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVR--PNEATLATTLSACAELGSLSKGKEIE 355
F W + I GY P EA+ LF R+++ R N+ TL++ L+A A + L GKEI
Sbjct: 185 FSWNAAISGYVTHNQPREALELF-RVMQRHERSSSNKFTLSSALAASAAIPCLRLGKEIH 243
Query: 356 EYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGD 415
Y++ L + V ++L+ ++ KCG +++A+ +F+++ D+D+ W+ MI+ G +
Sbjct: 244 GYLIRTELNLDEVVWSALLDLYGKCGSLDEARGIFDQMKDRDVVSWTTMIHRCFEDGRRE 303
Query: 416 QALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLC 475
+ LF + G++P+ + +L+AC+ G M + G +P
Sbjct: 304 EGFLLFRDLMQ-SGVRPNEYTFAGVLNACADHAAEHLGKEVHGYMM-HAGYDPGSFAISA 361
Query: 476 LVDLLGRAGRFDLALKTIHEM 496
LV + + G +A + +EM
Sbjct: 362 LVHMYSKCGNTRVARRVFNEM 382
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 111/221 (50%), Gaps = 9/221 (4%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI +G EE + ++Q+GV N +TF VL ACA+ + GK VH +++ G
Sbjct: 292 MIHRCFEDGRREEGFLLFRDLMQSGVRPNEYTFAGVLNACADHAAEHLGKEVHGYMMHAG 351
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+ +F + L+ MYSKC + +R+V +EM +VSW S+I +++ DEA+
Sbjct: 352 YDPGSFAISALVHMYSKCGNTRVARRVFNEM--HQPDLVSWTSLIVGYAQNGQPDEALHF 409
Query: 121 LKEMWVLGLELSASTFVSVVSGCSF----RQGIS-MHCCVYKLGLLNNEIPLANSVMSMY 175
+ + G + T+V V+S C+ +G+ H K GL++ A V+ +
Sbjct: 410 FELLLQSGTKPDQVTYVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYA-CVIDLL 468
Query: 176 AKFGKVNEARSIFDEIG-ETSIVSWTTIIGGYVNVGNVNEA 215
A+ G+ EA +I D + + W +++GG GN+ A
Sbjct: 469 ARSGRFKEAENIIDNMPVKPDKFLWASLLGGCRIHGNLELA 509
>gi|449527343|ref|XP_004170671.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g24000, mitochondrial-like [Cucumis sativus]
Length = 677
Score = 321 bits (823), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 166/497 (33%), Positives = 293/497 (58%), Gaps = 8/497 (1%)
Query: 129 LELSASTFVSVVSGCSF----RQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEA 184
LE + + +++ C++ +QG ++H + + +++ L N +++MYAK G + EA
Sbjct: 101 LEPERTLYSKMLNKCTYLRKLKQGRAIHAHI-QSSTFEDDLVLLNFILNMYAKCGSLEEA 159
Query: 185 RSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQV 244
+ +FD++ +VSWT +I GY G +EA L +M + P+ +L+
Sbjct: 160 QDLFDKMPTKDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKASGTG 219
Query: 245 GNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMI 304
+ +H+ LK GY+ + + L+ MY + + A+ +F+++ K+V W ++I
Sbjct: 220 PSDHHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAAKNVVSWNALI 279
Query: 305 GGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLE 364
G+A+ G + LF ++L+ P T ++ L ACA GSL +GK + +++ +G +
Sbjct: 280 AGHARKGEGEHVMRLFXQMLRQGFEPTHFTYSSVL-ACASSGSLEQGKWVHAHVIKSGGQ 338
Query: 365 SNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKM 424
+ +LI M++K G I AK+VF R+ +D+ W+++I+GYA HG+G +AL LF +M
Sbjct: 339 PIAYIGNTLIDMYAKSGSIKDAKKVFRRLVKQDIVSWNSIISGYAQHGLGAEALQLFEQM 398
Query: 425 QHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAG 484
+ ++P+ + + S+L+ACSHSG++D+G +F+ M+ + IE + H++ +VDLLGRAG
Sbjct: 399 LKAK-VQPNEITFLSVLTACSHSGLLDEGQYYFELMKKH-KIEAQVAHHVTVVDLLGRAG 456
Query: 485 RFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMAN 544
R + A K I EMP++ A VW LL AC H N++LG YAA+ + L+P +G ++L++N
Sbjct: 457 RLNEANKFIEEMPIKPTAAVWGALLGACRMHKNMDLGVYAAEQIFELDPHDSGPHVLLSN 516
Query: 545 LFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKE 604
++ SAG +AA R +M + + KEP S VEI+ V VFVA D SH + +I++ ++
Sbjct: 517 IYASAGRLSDAAKVRKMMKESGVKKEPACSWVEIENEVHVFVANDDSHPMREEIQRMWEK 576
Query: 605 LHIKLLEAGYIAEADIV 621
+ K+ E GY+ + V
Sbjct: 577 ISGKIKEIGYVPDTSHV 593
Score = 202 bits (515), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 129/470 (27%), Positives = 235/470 (50%), Gaps = 29/470 (6%)
Query: 7 NNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAF 66
N GS E + YS ML C + + G+ +H+H+ F+ D
Sbjct: 97 NCGSLEPERTLYSKMLNK---------------CTYLRKLKQGRAIHAHIQSSTFEDDLV 141
Query: 67 VQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWV 126
+ +++MY+KC ++ + D+MP + +VSW +IS +S++ EA+ + +M
Sbjct: 142 LLNFILNMYAKCGSLEEAQDLFDKMPT--KDMVSWTVLISGYSQSGQASEALALFPKMLH 199
Query: 127 LGLELSASTFVSVV----SGCSFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVN 182
LG + + T S++ +G S G +H K G N + + +S++ MYA++ +
Sbjct: 200 LGFQPNEFTLSSLLKASGTGPSDHHGRQLHAFSLKYGYDMN-VHVGSSLLDMYARWAHMR 258
Query: 183 EARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCA 242
EA+ IF+ + ++VSW +I G+ G L QM R P + + +L CA
Sbjct: 259 EAKVIFNSLAAKNVVSWNALIAGHARKGEGEHVMRLFXQMLRQGFEPTHFTY-SSVLACA 317
Query: 243 QVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTS 302
G+L +H+ ++KSG + N L+ MY K G ++ A++VF ++++ + W S
Sbjct: 318 SSGSLEQGKWVHAHVIKSGGQPIAYIGNTLIDMYAKSGSIKDAKKVFRRLVKQDIVSWNS 377
Query: 303 MIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNG 362
+I GYAQ G +EA+ LF+++LK V+PNE T + L+AC+ G L +G+ E + +
Sbjct: 378 IISGYAQHGLGAEALQLFEQMLKAKVQPNEITFLSVLTACSHSGLLDEGQYYFELMKKHK 437
Query: 363 LESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDL-AVWSAMINGYAIHGMGDQALNLF 421
+E+ +++ + + GR+N+A + E +P K AVW A++ +H D +
Sbjct: 438 IEAQVAHHVTVVDLLGRAGRLNEANKFIEEMPIKPTAAVWGALLGACRMHKNMDLGV--- 494
Query: 422 YKMQHVEGLKP-DAVVYTSILSACSHSGMVDDGLSFFKSM-QSNFGIEPS 469
Y + + L P D+ + + + + +G + D K M +S EP+
Sbjct: 495 YAAEQIFELDPHDSGPHVLLSNIYASAGRLSDAAKVRKMMKESGVKKEPA 544
Score = 131 bits (330), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 85/313 (27%), Positives = 154/313 (49%), Gaps = 13/313 (4%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+I + +G E L+ + ML G N FT +LKA S G+++H+ LK G
Sbjct: 177 LISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKASGTGPSDHHGRQLHAFSLKYG 236
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+ + V + L+DMY++ + ++ + + + ++VVSWN++I+ H+R + + +
Sbjct: 237 YDMNVHVGSSLLDMYARWAHMREAKVIFNSLAA--KNVVSWNALIAGHARKGEGEHVMRL 294
Query: 121 LKEMWVLGLELSASTFVSVV---SGCSFRQGISMHCCVYKLGLLNNEIPLA---NSVMSM 174
+M G E + T+ SV+ S S QG +H V K G P+A N+++ M
Sbjct: 295 FXQMLRQGFEPTHFTYSSVLACASSGSLEQGKWVHAHVIKSG----GQPIAYIGNTLIDM 350
Query: 175 YAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVF 234
YAK G + +A+ +F + + IVSW +II GY G EA L QM + V P+ + F
Sbjct: 351 YAKSGSIKDAKKVFRRLVKQDIVSWNSIISGYAQHGLGAEALQLFEQMLKAKVQPNEITF 410
Query: 235 LNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAV-L 293
L+++ C+ G L L+ K + +V + + G L A + + + +
Sbjct: 411 LSVLTACSHSGLLDEGQYYFELMKKHKIEAQVAHHVTVVDLLGRAGRLNEANKFIEEMPI 470
Query: 294 EKSVFLWTSMIGG 306
+ + +W +++G
Sbjct: 471 KPTAAVWGALLGA 483
>gi|297606175|ref|NP_001058069.2| Os06g0613100 [Oryza sativa Japonica Group]
gi|255677226|dbj|BAF19983.2| Os06g0613100 [Oryza sativa Japonica Group]
Length = 590
Score = 321 bits (823), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 161/455 (35%), Positives = 266/455 (58%), Gaps = 2/455 (0%)
Query: 167 LANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMS 226
L +++MY + G +++AR++ D + E S+VSWTT+I GY EA L +M R
Sbjct: 47 LGTRLVTMYVRCGALDDARNVLDRMPERSVVSWTTMISGYSQTERHVEALDLFIKMLRAG 106
Query: 227 VTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELAR 286
P+ ++ C+ +++ +HSLL+K+ + + + + L+ MY K +++ AR
Sbjct: 107 CIPNEYTLATVLTSCSGPQSIYQGKQVHSLLVKTNFESHMFVGSSLLDMYAKSENIQEAR 166
Query: 287 RVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELG 346
RVFD + E+ V T++I GYAQ G EA++LF++L ++ N T T ++A + L
Sbjct: 167 RVFDTLPERDVVSCTAIISGYAQKGLDEEALDLFRQLYSEGMQCNHVTFTTLVTALSGLA 226
Query: 347 SLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMIN 406
SL GK++ I+ L +Q SLI M+SKCG++ ++ VF+ + ++ + W+AM+
Sbjct: 227 SLDYGKQVHALILRKELPFFVALQNSLIDMYSKCGKLLYSRRVFDNMLERSVVSWNAMLM 286
Query: 407 GYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGI 466
GY HG+G + ++LF + H E +KPD+V ++LS CSH G+VD+GL F ++
Sbjct: 287 GYGRHGLGHEVISLFKDL-HKE-VKPDSVTLLAVLSGCSHGGLVDEGLDIFDTVVKEQSA 344
Query: 467 EPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAK 526
HY C++DLLGR+GR + AL I MP E +W LL AC H NV +GE A+
Sbjct: 345 LLHTGHYGCIIDLLGRSGRLEKALNLIENMPFESTPSIWGSLLGACRVHANVHVGELVAQ 404
Query: 527 NLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFV 586
LL + P + GNY++++N++ +AGMWK+ R LM ++ +TKEPG S + +D + F
Sbjct: 405 KLLEMEPENAGNYVILSNIYAAAGMWKDVFKVRKLMLEKTVTKEPGQSWIILDKVIHTFH 464
Query: 587 AGDRSHHLSVDIRKTLKELHIKLLEAGYIAEADIV 621
+ +R H DI +KE+ + + AG++ + V
Sbjct: 465 SSERFHPSKKDINAKIKEIFVDIKAAGFVPDLSCV 499
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 122/406 (30%), Positives = 207/406 (50%), Gaps = 26/406 (6%)
Query: 21 MLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSD 80
M G + + AC ++W+G++VH+ ++ ++ F+ T L+ MY +C
Sbjct: 1 MALPGASARFHEYEAAITACIERRALWEGRQVHARMITARYRPAVFLGTRLVTMYVRCGA 60
Query: 81 FVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVV 140
+R VLD MP RSVVSW ++IS +S+ + EA+ + +M G + T +V+
Sbjct: 61 LDDARNVLDRMPE--RSVVSWTTMISGYSQTERHVEALDLFIKMLRAGCIPNEYTLATVL 118
Query: 141 SGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSI 196
+ C S QG +H + K + + + +S++ MYAK + EAR +FD + E +
Sbjct: 119 TSCSGPQSIYQGKQVHSLLVKTN-FESHMFVGSSLLDMYAKSENIQEARRVFDTLPERDV 177
Query: 197 VSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSL 256
VS T II GY G EA L Q+ + + V F L+ + + +L +H+L
Sbjct: 178 VSCTAIISGYAQKGLDEEALDLFRQLYSEGMQCNHVTFTTLVTALSGLASLDYGKQVHAL 237
Query: 257 LLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEA 316
+L+ L N L+ MY+KCG L +RRVFD +LE+SV W +M+ GY + G E
Sbjct: 238 ILRKELPFFVALQNSLIDMYSKCGKLLYSRRVFDNMLERSVVSWNAMLMGYGRHGLGHEV 297
Query: 317 VNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIH- 375
++LFK L K V+P+ TL LS C+ G + +G +I + +V + Q++L+H
Sbjct: 298 ISLFKDLHK-EVKPDSVTLLAVLSGCSHGGLVDEGLDIFDTVV--------KEQSALLHT 348
Query: 376 --------MFSKCGRINKAKEVFERVP-DKDLAVWSAMINGYAIHG 412
+ + GR+ KA + E +P + ++W +++ +H
Sbjct: 349 GHYGCIIDLLGRSGRLEKALNLIENMPFESTPSIWGSLLGACRVHA 394
Score = 148 bits (374), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 87/289 (30%), Positives = 160/289 (55%), Gaps = 25/289 (8%)
Query: 238 ILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSV 297
I C + L+ +H+ ++ + Y L LV+MY +CG L+ AR V D + E+SV
Sbjct: 17 ITACIERRALWEGRQVHARMITARYRPAVFLGTRLVTMYVRCGALDDARNVLDRMPERSV 76
Query: 298 FLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEY 357
WT+MI GY+Q EA++LF ++L+ PNE TLAT L++C+ S+ +GK++
Sbjct: 77 VSWTTMISGYSQTERHVEALDLFIKMLRAGCIPNEYTLATVLTSCSGPQSIYQGKQVHSL 136
Query: 358 IVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQA 417
+V ES+ V +SL+ M++K I +A+ VF+ +P++D+ +A+I+GYA G+ ++A
Sbjct: 137 LVKTNFESHMFVGSSLLDMYAKSENIQEARRVFDTLPERDVVSCTAIISGYAQKGLDEEA 196
Query: 418 LNLFYKMQHVEGLKPDAVVYTSILSACS-----------HSGMVDDGLSFFKSMQSNFGI 466
L+LF ++ + EG++ + V +T++++A S H+ ++ L FF ++Q++
Sbjct: 197 LDLFRQL-YSEGMQCNHVTFTTLVTALSGLASLDYGKQVHALILRKELPFFVALQNS--- 252
Query: 467 EPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKH 515
L+D+ + G+ + + M +E W +L +H
Sbjct: 253 ---------LIDMYSKCGKLLYSRRVFDNM-LERSVVSWNAMLMGYGRH 291
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 94/318 (29%), Positives = 166/318 (52%), Gaps = 22/318 (6%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI + E L + ML+ G N +T VL +C+ SI+ GK+VHS ++K
Sbjct: 82 MISGYSQTERHVEALDLFIKMLRAGCIPNEYTLATVLTSCSGPQSIYQGKQVHSLLVKTN 141
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F+ FV + L+DMY+K + +R+V D +P R VVS +IIS +++ L++EA+ +
Sbjct: 142 FESHMFVGSSLLDMYAKSENIQEARRVFDTLPE--RDVVSCTAIISGYAQKGLDEEALDL 199
Query: 121 LKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGLLNNEIP----LANSVMSMYA 176
++++ G++ + TF ++V+ S + V+ L +L E+P L NS++ MY+
Sbjct: 200 FRQLYSEGMQCNHVTFTTLVTALSGLASLDYGKQVHAL-ILRKELPFFVALQNSLIDMYS 258
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K GK+ +R +FD + E S+VSW ++ GY G +E L + + V PD V L
Sbjct: 259 KCGKLLYSRRVFDNMLERSVVSWNAMLMGYGRHGLGHEVISLFKDLHK-EVKPDSVTLLA 317
Query: 237 LILGCAQVG------NLF-LALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVF 289
++ GC+ G ++F + S LL +G+ ++ + + G LE A +
Sbjct: 318 VLSGCSHGGLVDEGLDIFDTVVKEQSALLHTGHY------GCIIDLLGRSGRLEKALNLI 371
Query: 290 DAV-LEKSVFLWTSMIGG 306
+ + E + +W S++G
Sbjct: 372 ENMPFESTPSIWGSLLGA 389
>gi|51090919|dbj|BAD35524.1| selenium-binding protein-like [Oryza sativa Japonica Group]
gi|51090953|dbj|BAD35556.1| selenium-binding protein-like [Oryza sativa Japonica Group]
Length = 615
Score = 321 bits (822), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 161/455 (35%), Positives = 266/455 (58%), Gaps = 2/455 (0%)
Query: 167 LANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMS 226
L +++MY + G +++AR++ D + E S+VSWTT+I GY EA L +M R
Sbjct: 79 LGTRLVTMYVRCGALDDARNVLDRMPERSVVSWTTMISGYSQTERHVEALDLFIKMLRAG 138
Query: 227 VTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELAR 286
P+ ++ C+ +++ +HSLL+K+ + + + + L+ MY K +++ AR
Sbjct: 139 CIPNEYTLATVLTSCSGPQSIYQGKQVHSLLVKTNFESHMFVGSSLLDMYAKSENIQEAR 198
Query: 287 RVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELG 346
RVFD + E+ V T++I GYAQ G EA++LF++L ++ N T T ++A + L
Sbjct: 199 RVFDTLPERDVVSCTAIISGYAQKGLDEEALDLFRQLYSEGMQCNHVTFTTLVTALSGLA 258
Query: 347 SLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMIN 406
SL GK++ I+ L +Q SLI M+SKCG++ ++ VF+ + ++ + W+AM+
Sbjct: 259 SLDYGKQVHALILRKELPFFVALQNSLIDMYSKCGKLLYSRRVFDNMLERSVVSWNAMLM 318
Query: 407 GYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGI 466
GY HG+G + ++LF + H E +KPD+V ++LS CSH G+VD+GL F ++
Sbjct: 319 GYGRHGLGHEVISLFKDL-HKE-VKPDSVTLLAVLSGCSHGGLVDEGLDIFDTVVKEQSA 376
Query: 467 EPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAK 526
HY C++DLLGR+GR + AL I MP E +W LL AC H NV +GE A+
Sbjct: 377 LLHTGHYGCIIDLLGRSGRLEKALNLIENMPFESTPSIWGSLLGACRVHANVHVGELVAQ 436
Query: 527 NLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFV 586
LL + P + GNY++++N++ +AGMWK+ R LM ++ +TKEPG S + +D + F
Sbjct: 437 KLLEMEPENAGNYVILSNIYAAAGMWKDVFKVRKLMLEKTVTKEPGQSWIILDKVIHTFH 496
Query: 587 AGDRSHHLSVDIRKTLKELHIKLLEAGYIAEADIV 621
+ +R H DI +KE+ + + AG++ + V
Sbjct: 497 SSERFHPSKKDINAKIKEIFVDIKAAGFVPDLSCV 531
Score = 199 bits (507), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 126/415 (30%), Positives = 210/415 (50%), Gaps = 24/415 (5%)
Query: 11 FEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTG 70
F L S M G + + AC ++W+G++VH+ ++ ++ F+ T
Sbjct: 23 FVAPLRAASGMALPGASARFHEYEAAITACIERRALWEGRQVHARMITARYRPAVFLGTR 82
Query: 71 LIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLE 130
L+ MY +C +R VLD MP RSVVSW ++IS +S+ + EA+ + +M G
Sbjct: 83 LVTMYVRCGALDDARNVLDRMPE--RSVVSWTTMISGYSQTERHVEALDLFIKMLRAGCI 140
Query: 131 LSASTFVSVVSGCSFRQGISMHCCVYKLGLLNN---EIPLANSVMSMYAKFGKVNEARSI 187
+ T +V++ CS Q I V+ L + N + + +S++ MYAK + EAR +
Sbjct: 141 PNEYTLATVLTSCSGPQSIYQGKQVHSLLVKTNFESHMFVGSSLLDMYAKSENIQEARRV 200
Query: 188 FDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNL 247
FD + E +VS T II GY G EA L Q+ + + V F L+ + + +L
Sbjct: 201 FDTLPERDVVSCTAIISGYAQKGLDEEALDLFRQLYSEGMQCNHVTFTTLVTALSGLASL 260
Query: 248 FLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGY 307
+H+L+L+ L N L+ MY+KCG L +RRVFD +LE+SV W +M+ GY
Sbjct: 261 DYGKQVHALILRKELPFFVALQNSLIDMYSKCGKLLYSRRVFDNMLERSVVSWNAMLMGY 320
Query: 308 AQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNR 367
+ G E ++LFK L K V+P+ TL LS C+ G + +G +I + +V
Sbjct: 321 GRHGLGHEVISLFKDLHK-EVKPDSVTLLAVLSGCSHGGLVDEGLDIFDTVV-------- 371
Query: 368 QVQTSLIH---------MFSKCGRINKAKEVFERVP-DKDLAVWSAMINGYAIHG 412
+ Q++L+H + + GR+ KA + E +P + ++W +++ +H
Sbjct: 372 KEQSALLHTGHYGCIIDLLGRSGRLEKALNLIENMPFESTPSIWGSLLGACRVHA 426
Score = 148 bits (374), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 88/289 (30%), Positives = 159/289 (55%), Gaps = 25/289 (8%)
Query: 238 ILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSV 297
I C + L+ +H+ ++ + Y L LV+MY +CG L+ AR V D + E+SV
Sbjct: 49 ITACIERRALWEGRQVHARMITARYRPAVFLGTRLVTMYVRCGALDDARNVLDRMPERSV 108
Query: 298 FLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEY 357
WT+MI GY+Q EA++LF ++L+ PNE TLAT L++C+ S+ +GK++
Sbjct: 109 VSWTTMISGYSQTERHVEALDLFIKMLRAGCIPNEYTLATVLTSCSGPQSIYQGKQVHSL 168
Query: 358 IVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQA 417
+V ES+ V +SL+ M++K I +A+ VF+ +P++D+ +A+I+GYA G+ ++A
Sbjct: 169 LVKTNFESHMFVGSSLLDMYAKSENIQEARRVFDTLPERDVVSCTAIISGYAQKGLDEEA 228
Query: 418 LNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDG-----------LSFFKSMQSNFGI 466
L+LF ++ + EG++ + V +T++++A S +D G L FF ++Q++
Sbjct: 229 LDLFRQL-YSEGMQCNHVTFTTLVTALSGLASLDYGKQVHALILRKELPFFVALQNS--- 284
Query: 467 EPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKH 515
L+D+ + G+ + + M +E W +L +H
Sbjct: 285 ---------LIDMYSKCGKLLYSRRVFDNM-LERSVVSWNAMLMGYGRH 323
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 94/318 (29%), Positives = 166/318 (52%), Gaps = 22/318 (6%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI + E L + ML+ G N +T VL +C+ SI+ GK+VHS ++K
Sbjct: 114 MISGYSQTERHVEALDLFIKMLRAGCIPNEYTLATVLTSCSGPQSIYQGKQVHSLLVKTN 173
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F+ FV + L+DMY+K + +R+V D +P R VVS +IIS +++ L++EA+ +
Sbjct: 174 FESHMFVGSSLLDMYAKSENIQEARRVFDTLPE--RDVVSCTAIISGYAQKGLDEEALDL 231
Query: 121 LKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGLLNNEIP----LANSVMSMYA 176
++++ G++ + TF ++V+ S + V+ L +L E+P L NS++ MY+
Sbjct: 232 FRQLYSEGMQCNHVTFTTLVTALSGLASLDYGKQVHAL-ILRKELPFFVALQNSLIDMYS 290
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K GK+ +R +FD + E S+VSW ++ GY G +E L + + V PD V L
Sbjct: 291 KCGKLLYSRRVFDNMLERSVVSWNAMLMGYGRHGLGHEVISLFKDLHK-EVKPDSVTLLA 349
Query: 237 LILGCAQVG------NLF-LALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVF 289
++ GC+ G ++F + S LL +G+ ++ + + G LE A +
Sbjct: 350 VLSGCSHGGLVDEGLDIFDTVVKEQSALLHTGHY------GCIIDLLGRSGRLEKALNLI 403
Query: 290 DAV-LEKSVFLWTSMIGG 306
+ + E + +W S++G
Sbjct: 404 ENMPFESTPSIWGSLLGA 421
>gi|125543632|gb|EAY89771.1| hypothetical protein OsI_11313 [Oryza sativa Indica Group]
Length = 798
Score = 321 bits (822), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 193/602 (32%), Positives = 313/602 (51%), Gaps = 63/602 (10%)
Query: 76 SKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEM----------W 125
++ + +R + MP LR+ S+N++++ + R L D A+ + + M
Sbjct: 28 ARAGNIEGARAAFEAMP--LRTTASYNALLAGYFRNRLPDAALGLFRRMPSRDLASYNAL 85
Query: 126 VLGLELSASTFV-------------SVVSGCSFRQGISMHCCVYKLGLLNNEIPLANSV- 171
+ GL L T SVVS S +G H + L ++P N V
Sbjct: 86 ISGLSLRRQTLPDAAAALASIPFPPSVVSFTSLLRGYVRHGLLADAIRLFQQMPERNHVS 145
Query: 172 ----MSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSV 227
+ G+VNEAR +FDE+ + +V+WT ++ GY G + EA L ++M + +V
Sbjct: 146 YTVLLGGLLDAGRVNEARRLFDEMPDRDVVAWTAMLSGYCQAGRITEARALFDEMPKRNV 205
Query: 228 TPDLVVFLNLILGCAQVGNLFLALSMHSLL---------------LKSGYNN-------- 264
V + +I G AQ G + LA + ++ +++G+
Sbjct: 206 ----VSWTAMISGYAQNGEVNLARKLFEVMPERNEVSWTAMLVGYIQAGHVEDAAELFNA 261
Query: 265 --EDPLD--NLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLF 320
E P+ N ++ + + G ++ A+ VF+ + E+ W++MI Y Q + EA++ F
Sbjct: 262 MPEHPVAACNAMMVGFGQRGMVDAAKTVFEKMRERDDGTWSAMIKAYEQNEFLMEALSTF 321
Query: 321 KRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKC 380
+ +L VRPN ++ + L+ CA L L G+E+ ++ + + ++LI M+ KC
Sbjct: 322 REMLWRGVRPNYPSVISILTVCAALAVLDYGREVHAAMLRCSFDMDVFAVSALITMYIKC 381
Query: 381 GRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSI 440
G ++KAK VF KD+ +W++MI GYA HG+G+QAL +F+ M+ + G+ PD + Y
Sbjct: 382 GNLDKAKRVFHTFEPKDIVMWNSMITGYAQHGLGEQALGIFHDMR-LAGMSPDGITYIGA 440
Query: 441 LSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEV 500
L+ACS++G V +G F SM N I P EHY C+VDLLGR+G + A I MPVE
Sbjct: 441 LTACSYTGKVKEGREIFNSMTVNSSIRPGAEHYSCMVDLLGRSGLVEEAFDLIKNMPVEP 500
Query: 501 QAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARG 560
A +W L+ AC H N E+ E AAK LL L PG+ G Y+L+++++TS G W++A+ R
Sbjct: 501 DAVIWGALMGACRMHRNAEIAEVAAKKLLELEPGNAGPYVLLSHIYTSVGRWEDASKMRK 560
Query: 561 LMDDRRLTKEPGWSQVEIDGSVQVFVAGD-RSHHLSVDIRKTLKELHIKLLEAGYIAEAD 619
+ R L K PG S +E D V +F +GD +H I + L++L L+E+GY A+
Sbjct: 561 FISSRNLNKSPGCSWIEYDKRVHLFTSGDVLAHPEHAAILRILEKLDGLLMESGYSADGS 620
Query: 620 IV 621
V
Sbjct: 621 FV 622
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 89/413 (21%), Positives = 197/413 (47%), Gaps = 17/413 (4%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
++R +G + + + M + N ++ ++L + + + +R+ +
Sbjct: 118 LLRGYVRHGLLADAIRLFQQMPER----NHVSYTVLLGGLLDAGRVNEARRLFDEMP--- 170
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+D T ++ Y + +R + DEMP R +VVSW ++IS +++ N E L
Sbjct: 171 -DRDVVAWTAMLSGYCQAGRITEARALFDEMPKR--NVVSWTAMISGYAQ---NGEVNLA 224
Query: 121 LKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGK 180
K V+ E + ++ +++ G + G + + + N++M + + G
Sbjct: 225 RKLFEVMP-ERNEVSWTAMLVG-YIQAGHVEDAAELFNAMPEHPVAACNAMMVGFGQRGM 282
Query: 181 VNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILG 240
V+ A+++F+++ E +W+ +I Y + EA +M V P+ ++++
Sbjct: 283 VDAAKTVFEKMRERDDGTWSAMIKAYEQNEFLMEALSTFREMLWRGVRPNYPSVISILTV 342
Query: 241 CAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLW 300
CA + L +H+ +L+ ++ + + L++MY KCG+L+ A+RVF K + +W
Sbjct: 343 CAALAVLDYGREVHAAMLRCSFDMDVFAVSALITMYIKCGNLDKAKRVFHTFEPKDIVMW 402
Query: 301 TSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVL 360
SMI GYAQ G +A+ +F + + P+ T L+AC+ G + +G+EI + +
Sbjct: 403 NSMITGYAQHGLGEQALGIFHDMRLAGMSPDGITYIGALTACSYTGKVKEGREIFNSMTV 462
Query: 361 N-GLESNRQVQTSLIHMFSKCGRINKAKEVFERVP-DKDLAVWSAMINGYAIH 411
N + + + ++ + + G + +A ++ + +P + D +W A++ +H
Sbjct: 463 NSSIRPGAEHYSCMVDLLGRSGLVEEAFDLIKNMPVEPDAVIWGALMGACRMH 515
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 97/415 (23%), Positives = 178/415 (42%), Gaps = 76/415 (18%)
Query: 169 NSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQM------ 222
N+ ++ A+ G + AR+ F+ + + S+ ++ GY + A GL +M
Sbjct: 21 NARIAHLARAGNIEGARAAFEAMPLRTTASYNALLAGYFRNRLPDAALGLFRRMPSRDLA 80
Query: 223 -----------RRMSV------------TPDLVVFLNLILGCAQVGNLFLALSMHSL--- 256
RR ++ P +V F +L+ G + G L A+ +
Sbjct: 81 SYNALISGLSLRRQTLPDAAAALASIPFPPSVVSFTSLLRGYVRHGLLADAIRLFQQMPE 140
Query: 257 ------------LLKSGYNNE-----DPLDN-------LLVSMYTKCGDLELARRVFDAV 292
LL +G NE D + + ++S Y + G + AR +FD +
Sbjct: 141 RNHVSYTVLLGGLLDAGRVNEARRLFDEMPDRDVVAWTAMLSGYCQAGRITEARALFDEM 200
Query: 293 LEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGK 352
+++V WT+MI GYAQ G VNL ++L + NE + L + G +
Sbjct: 201 PKRNVVSWTAMISGYAQNG----EVNLARKLFEVMPERNEVSWTAMLVGYIQAGHVEDAA 256
Query: 353 EIEEYIVLNGL-ESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIH 411
E+ N + E +++ F + G ++ AK VFE++ ++D WSAMI Y +
Sbjct: 257 EL-----FNAMPEHPVAACNAMMVGFGQRGMVDAAKTVFEKMRERDDGTWSAMIKAYEQN 311
Query: 412 GMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSM-QSNFGIEPSI 470
+AL+ F +M G++P+ SIL+ C+ ++D G +M + +F ++ +
Sbjct: 312 EFLMEALSTFREMLW-RGVRPNYPSVISILTVCAALAVLDYGREVHAAMLRCSFDMD--V 368
Query: 471 EHYLCLVDLLGRAGRFDLALKTIHEM-PVEVQAQVWAPLLSACMKHHNVELGEYA 524
L+ + + G D A + H P ++ +W +++ +H LGE A
Sbjct: 369 FAVSALITMYIKCGNLDKAKRVFHTFEPKDI--VMWNSMITGYAQH---GLGEQA 418
>gi|224089505|ref|XP_002308737.1| predicted protein [Populus trichocarpa]
gi|222854713|gb|EEE92260.1| predicted protein [Populus trichocarpa]
Length = 590
Score = 321 bits (822), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 159/463 (34%), Positives = 271/463 (58%), Gaps = 4/463 (0%)
Query: 161 LNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCN 220
+++ + N+++++YAK G + AR +FDE+ +V+WT +I GY +A L
Sbjct: 46 FRDDLVMQNTLLNLYAKCGDLVYARKLFDEMSSRDVVTWTALITGYSQHDRPQDALLLLP 105
Query: 221 QMRRMSVTPDLVVFLNLILGCAQVG--NLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTK 278
+M R+ + P+ +L+ + VG ++ +H L L+ GY++ + ++ MY +
Sbjct: 106 EMLRIGLKPNQFTLASLLKAASGVGSTDVLQGRQLHGLCLRYGYDSNVYVSCAILDMYAR 165
Query: 279 CGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATT 338
C LE A+ +FD ++ K+ W ++I GYA+ G +A LF +L+ +V+P T ++
Sbjct: 166 CHHLEEAQLIFDVMVSKNEVSWNALIAGYARKGQGDKAFCLFSNMLRENVKPTHFTYSSV 225
Query: 339 LSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDL 398
L ACA +GSL +GK + ++ G + V +L+ M++K G I AK+VF+R+ +D+
Sbjct: 226 LCACASMGSLEQGKWVHALMIKWGEKLVAFVGNTLLDMYAKSGSIEDAKKVFDRLAKRDV 285
Query: 399 AVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFK 458
W++M+ GY+ HG+G AL F +M + P+ + + +L+ACSH+G++D+G +F
Sbjct: 286 VSWNSMLTGYSQHGLGKVALQRFEEMLRTR-IAPNDITFLCVLTACSHAGLLDEGRHYF- 343
Query: 459 SMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNV 518
M + +EP I HY+ +VDLLGRAG D A++ I EMP++ A VW LL AC H N+
Sbjct: 344 DMMKKYNVEPQISHYVTMVDLLGRAGHLDRAIQFISEMPIKPTAAVWGALLGACRMHKNM 403
Query: 519 ELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEI 578
ELG YAA+ + L+ G ++L+ N++ AG W +AA R +M + + KEP S VE+
Sbjct: 404 ELGGYAAECIFELDSHYPGTHVLLYNIYALAGRWNDAAKVRKMMKESGVKKEPACSWVEM 463
Query: 579 DGSVQVFVAGDRSHHLSVDIRKTLKELHIKLLEAGYIAEADIV 621
+ V VFVA D +H +I +++ K+ E GY+ ++ V
Sbjct: 464 ENEVHVFVADDDAHPQRREIHNMWEQISDKIKEIGYVPDSSHV 506
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 115/383 (30%), Positives = 210/383 (54%), Gaps = 10/383 (2%)
Query: 36 VLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRL 95
+LK C ++N + +GK +H+ +L F+ D +Q L+++Y+KC D V +RK+ DEM R
Sbjct: 21 LLKRCTHLNKLNEGKIIHALLLNSRFRDDLVMQNTLLNLYAKCGDLVYARKLFDEMSSR- 79
Query: 96 RSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCS------FRQGI 149
VV+W ++I+ +S+ +A+L+L EM +GL+ + T S++ S QG
Sbjct: 80 -DVVTWTALITGYSQHDRPQDALLLLPEMLRIGLKPNQFTLASLLKAASGVGSTDVLQGR 138
Query: 150 SMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNV 209
+H + G +N + ++ +++ MYA+ + EA+ IFD + + VSW +I GY
Sbjct: 139 QLHGLCLRYGYDSN-VYVSCAILDMYARCHHLEEAQLIFDVMVSKNEVSWNALIAGYARK 197
Query: 210 GNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLD 269
G ++AF L + M R +V P + +++ CA +G+L +H+L++K G +
Sbjct: 198 GQGDKAFCLFSNMLRENVKPTHFTYSSVLCACASMGSLEQGKWVHALMIKWGEKLVAFVG 257
Query: 270 NLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVR 329
N L+ MY K G +E A++VFD + ++ V W SM+ GY+Q G A+ F+ +L+T +
Sbjct: 258 NTLLDMYAKSGSIEDAKKVFDRLAKRDVVSWNSMLTGYSQHGLGKVALQRFEEMLRTRIA 317
Query: 330 PNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEV 389
PN+ T L+AC+ G L +G+ + + +E +++ + + G +++A +
Sbjct: 318 PNDITFLCVLTACSHAGLLDEGRHYFDMMKKYNVEPQISHYVTMVDLLGRAGHLDRAIQF 377
Query: 390 FERVPDKDL-AVWSAMINGYAIH 411
+P K AVW A++ +H
Sbjct: 378 ISEMPIKPTAAVWGALLGACRMH 400
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 78/318 (24%), Positives = 157/318 (49%), Gaps = 20/318 (6%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINS--IWDGKRVHSHVLK 58
+I + + ++ L ML+ G+ N FT +LKA + + S + G+++H L+
Sbjct: 87 LITGYSQHDRPQDALLLLPEMLRIGLKPNQFTLASLLKAASGVGSTDVLQGRQLHGLCLR 146
Query: 59 VGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAI 118
G+ + +V ++DMY++C ++ + D M ++ VSWN++I+ ++R D+A
Sbjct: 147 YGYDSNVYVSCAILDMYARCHHLEEAQLIFDVMVS--KNEVSWNALIAGYARKGQGDKAF 204
Query: 119 LVLKEMWVLGLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLA---NSV 171
+ M ++ + T+ SV+ C S QG +H + K G E +A N++
Sbjct: 205 CLFSNMLRENVKPTHFTYSSVLCACASMGSLEQGKWVHALMIKWG----EKLVAFVGNTL 260
Query: 172 MSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDL 231
+ MYAK G + +A+ +FD + + +VSW +++ GY G A +M R + P+
Sbjct: 261 LDMYAKSGSIEDAKKVFDRLAKRDVVSWNSMLTGYSQHGLGKVALQRFEEMLRTRIAPND 320
Query: 232 VVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNL--LVSMYTKCGDLELA-RRV 288
+ FL ++ C+ G L H + YN E + + +V + + G L+ A + +
Sbjct: 321 ITFLCVLTACSHAG--LLDEGRHYFDMMKKYNVEPQISHYVTMVDLLGRAGHLDRAIQFI 378
Query: 289 FDAVLEKSVFLWTSMIGG 306
+ ++ + +W +++G
Sbjct: 379 SEMPIKPTAAVWGALLGA 396
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 64/115 (55%), Gaps = 1/115 (0%)
Query: 337 TTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDK 396
T L C L L++GK I ++ + + +Q +L+++++KCG + A+++F+ + +
Sbjct: 20 TLLKRCTHLNKLNEGKIIHALLLNSRFRDDLVMQNTLLNLYAKCGDLVYARKLFDEMSSR 79
Query: 397 DLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVD 451
D+ W+A+I GY+ H AL L +M + GLKP+ S+L A S G D
Sbjct: 80 DVVTWTALITGYSQHDRPQDALLLLPEMLRI-GLKPNQFTLASLLKAASGVGSTD 133
>gi|359489798|ref|XP_002274780.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Vitis vinifera]
Length = 804
Score = 321 bits (822), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 186/558 (33%), Positives = 305/558 (54%), Gaps = 10/558 (1%)
Query: 21 MLQTGVHGNSFTFPLVLKACANINSIWDGKRV-HSHVLKVGFQQDAFVQTGLIDMYSKCS 79
ML T N T V++A + + + D RV V+K+GF+ + V T LI YS
Sbjct: 1 MLMTEQRPNHVTVLSVIRAISGLG-LEDMMRVICGSVIKLGFESEVSVATALIGFYSD-Y 58
Query: 80 DFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSV 139
D K+ ++ P++ +V W++++SA ++ EA + + M G+E + + VS+
Sbjct: 59 DMGIVWKIFNQTPIK--DLVLWSAMVSACVKSGQYGEAFEIFRAMQYDGVEPNHVSIVSI 116
Query: 140 VSGCSFRQGISMHCCVYKLGLLNNEIPLAN---SVMSMYAKFGKVNEARSIFDEIGETSI 196
+ C+ + ++ + PL N S++ MYAK + +FD+I E +
Sbjct: 117 LPACANVGALLFGKEIHGFSIKKMFHPLTNVHNSLVDMYAKCRNFKASMLVFDQILEKDL 176
Query: 197 VSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSL 256
+SWTTII G + EAF ++M+ D + +LI+ Q ++ H
Sbjct: 177 ISWTTIIRGCIENDCPREAFKAFSRMQFSCFGADETIVQDLIVAIIQADEHKFGIAFHGF 236
Query: 257 LLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEA 316
LLK+G + L+ MY K G+LE A VFD + +K W++MI +A +P A
Sbjct: 237 LLKNGLLAFVSIGTALLQMYAKFGELESAIIVFDQLNKKDYISWSAMISVHAHSRHPYNA 296
Query: 317 VNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHM 376
+ FK++ T RPNE T + L AC+ +G+ G+ I+ + G SN + ++LI +
Sbjct: 297 LETFKQMQSTDERPNEITFVSLLQACSLIGAQELGESIQAHATKAGYLSNAFLSSALIDL 356
Query: 377 FSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVV 436
+ K GRIN+ + +F +P KDL WS+MINGY ++G GD+AL F M G+KP+ VV
Sbjct: 357 YCKFGRINQGRAIFNEIPTKDLVCWSSMINGYGLNGCGDEALETFSNMLAC-GVKPNEVV 415
Query: 437 YTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEM 496
+ S+LSACSH G+ +G S F SM+ +GI P + HY C+VDL+ R G + AL+ +++M
Sbjct: 416 FISVLSACSHCGLEHEGWSCFSSMEQKYGIIPKLPHYACMVDLISRRGNIEGALQFVNKM 475
Query: 497 PVEVQAQVWAPLLSACMKHH-NVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEA 555
P+E ++W LL+ C H ++E+ E A+ L+ L+P +T Y++++NL+ G W +
Sbjct: 476 PMEPDKRIWGALLAGCRSTHGSIEIAELVAERLIGLDPQNTSYYVILSNLYAEQGRWGDV 535
Query: 556 ATARGLMDDRRLTKEPGW 573
R L+D++ L KE G+
Sbjct: 536 ERLRKLVDEKGLKKEMGY 553
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 125/458 (27%), Positives = 217/458 (47%), Gaps = 31/458 (6%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
M+ +G + E + +M GV N + +L ACAN+ ++ GK +H +K
Sbjct: 81 MVSACVKSGQYGEAFEIFRAMQYDGVEPNHVSIVSILPACANVGALLFGKEIHGFSIKKM 140
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACL-ND---E 116
F V L+DMY+KC +F +S V D+ + + ++SW +II R C+ ND E
Sbjct: 141 FHPLTNVHNSLVDMYAKCRNFKASMLVFDQ--ILEKDLISWTTII----RGCIENDCPRE 194
Query: 117 AILVLKEMWV--LGLE--LSASTFVSVVSGCSFRQGISMHCCVYKLGLLNNEIPLANSVM 172
A M G + + V+++ + GI+ H + K GLL + + +++
Sbjct: 195 AFKAFSRMQFSCFGADETIVQDLIVAIIQADEHKFGIAFHGFLLKNGLLAF-VSIGTALL 253
Query: 173 SMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLV 232
MYAKFG++ A +FD++ + +SW+ +I + + + A QM+ P+ +
Sbjct: 254 QMYAKFGELESAIIVFDQLNKKDYISWSAMISVHAHSRHPYNALETFKQMQSTDERPNEI 313
Query: 233 VFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAV 292
F++L+ C+ +G L S+ + K+GY + L + L+ +Y K G + R +F+ +
Sbjct: 314 TFVSLLQACSLIGAQELGESIQAHATKAGYLSNAFLSSALIDLYCKFGRINQGRAIFNEI 373
Query: 293 LEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGK 352
K + W+SMI GY G EA+ F +L V+PNE + LSAC+ G
Sbjct: 374 PTKDLVCWSSMINGYGLNGCGDEALETFSNMLACGVKPNEVVFISVLSACSHCGL----- 428
Query: 353 EIEEYIVLNGLESNRQVQTSLIH------MFSKCGRINKAKEVFERVP-DKDLAVWSAMI 405
E E + + +E + L H + S+ G I A + ++P + D +W A++
Sbjct: 429 EHEGWSCFSSMEQKYGIIPKLPHYACMVDLISRRGNIEGALQFVNKMPMEPDKRIWGALL 488
Query: 406 NG-YAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILS 442
G + HG + A + + + GL P Y ILS
Sbjct: 489 AGCRSTHGSIEIAELV---AERLIGLDPQNTSYYVILS 523
>gi|449442767|ref|XP_004139152.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g04370-like [Cucumis sativus]
Length = 743
Score = 321 bits (822), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 182/608 (29%), Positives = 319/608 (52%), Gaps = 9/608 (1%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+I + + G + S + M ++G+ S T +L I+ + +H ++ G
Sbjct: 121 IIGSYSREGDIDIAFSMFKQMRESGIQPTSVT---LLSLLPGISKLPLLLCLHCLIILHG 177
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F+ D + +++MY KC +R++ + R +VSWNS++SA+S+ +E + +
Sbjct: 178 FESDLALSNSMVNMYGKCGRIADARRLFQS--IDCRDIVSWNSLLSAYSKIGATEEILQL 235
Query: 121 LKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGL---LNNEIPLANSVMSMYAK 177
L+ M + ++ TF S +S + + + + V+ L L LN + + ++++ +Y +
Sbjct: 236 LQAMKIEDIKPDKQTFCSALSASAIKGDLRLGKLVHGLMLKDGLNIDQHVESALVVLYLR 295
Query: 178 FGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNL 237
++ A +F E +V WT +I G V ++A G+ QM +V P +
Sbjct: 296 CRCLDPAYKVFKSTTEKDVVMWTAMISGLVQNDCADKALGVFYQMIESNVKPSTATLASG 355
Query: 238 ILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSV 297
+ CAQ+G + S+H +L+ G + P N LV+MY KC L+ + +F+ ++EK +
Sbjct: 356 LAACAQLGCCDIGASIHGYVLRQGIMLDIPAQNSLVTMYAKCNKLQQSCSIFNKMVEKDL 415
Query: 298 FLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEY 357
W +++ G+A+ GY S+ + F + K+ +RP+ T+ + L AC G+L +GK I +
Sbjct: 416 VSWNAIVAGHAKNGYLSKGIFFFNEMRKSFLRPDSITVTSLLQACGSAGALCQGKWIHNF 475
Query: 358 IVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQA 417
++ + L +T+L+ M+ KCG + A++ F+ + +DL WS +I GY +G G+ A
Sbjct: 476 VLRSSLIPCIMTETALVDMYFKCGNLENAQKCFDCMLQRDLVAWSTLIVGYGFNGKGEIA 535
Query: 418 LNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLV 477
L + + G++P+ V++ S+LSACSH G++ GLS ++SM +F + P++EH C+V
Sbjct: 536 LRKYSEFLGT-GMEPNHVIFISVLSACSHGGLISKGLSIYESMTKDFRMSPNLEHRACVV 594
Query: 478 DLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTG 537
DLL RAG+ D A M E V LL AC + VELG+ A+++ L P G
Sbjct: 595 DLLSRAGKVDEAYSFYKMMFKEPSIVVLGMLLDACRVNGRVELGKVIARDMFELKPVDPG 654
Query: 538 NYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVD 597
N++ +AN + S W A M L K PGWS +E+ G+ F A SH
Sbjct: 655 NFVQLANSYASMSRWDGVEKAWTQMRSLGLKKYPGWSSIEVHGTTFTFFASHNSHPKIEK 714
Query: 598 IRKTLKEL 605
I T+K L
Sbjct: 715 IILTVKAL 722
Score = 259 bits (663), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 154/502 (30%), Positives = 271/502 (53%), Gaps = 5/502 (0%)
Query: 8 NGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFV 67
G+ + L TY SM +T +++TFP + KAC N+N G +H V+ G D+++
Sbjct: 27 QGAHHQVLQTYISMQKTHTQLDAYTFPSLFKACTNLNLFSHGLSLHQSVVVNGLSHDSYI 86
Query: 68 QTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVL 127
+ LI Y+K RKV D M R+VV W +II ++SR D A + K+M
Sbjct: 87 GSSLISFYAKFGCIHLGRKVFDTM--LKRNVVPWTTIIGSYSREGDIDIAFSMFKQMRES 144
Query: 128 GLELSASTFVSVVSGCSFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSI 187
G++ ++ T +S++ G S + C+ L +++ L+NS+++MY K G++ +AR +
Sbjct: 145 GIQPTSVTLLSLLPGISKLPLLLCLHCLIILHGFESDLALSNSMVNMYGKCGRIADARRL 204
Query: 188 FDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNL 247
F I IVSW +++ Y +G E L M+ + PD F + + A G+L
Sbjct: 205 FQSIDCRDIVSWNSLLSAYSKIGATEEILQLLQAMKIEDIKPDKQTFCSALSASAIKGDL 264
Query: 248 FLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGY 307
L +H L+LK G N + +++ LV +Y +C L+ A +VF + EK V +WT+MI G
Sbjct: 265 RLGKLVHGLMLKDGLNIDQHVESALVVLYLRCRCLDPAYKVFKSTTEKDVVMWTAMISGL 324
Query: 308 AQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNR 367
Q +A+ +F ++++++V+P+ ATLA+ L+ACA+LG G I Y++ G+ +
Sbjct: 325 VQNDCADKALGVFYQMIESNVKPSTATLASGLAACAQLGCCDIGASIHGYVLRQGIMLDI 384
Query: 368 QVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHV 427
Q SL+ M++KC ++ ++ +F ++ +KDL W+A++ G+A +G + + F +M+
Sbjct: 385 PAQNSLVTMYAKCNKLQQSCSIFNKMVEKDLVSWNAIVAGHAKNGYLSKGIFFFNEMRK- 443
Query: 428 EGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFD 487
L+PD++ TS+L AC +G + G + + + P I LVD+ + G +
Sbjct: 444 SFLRPDSITVTSLLQACGSAGALCQG-KWIHNFVLRSSLIPCIMTETALVDMYFKCGNLE 502
Query: 488 LALKTIHEMPVEVQAQVWAPLL 509
A K M ++ W+ L+
Sbjct: 503 NAQKCFDCM-LQRDLVAWSTLI 523
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 80/305 (26%), Positives = 155/305 (50%), Gaps = 28/305 (9%)
Query: 222 MRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGD 281
M++ D F +L C + LS+H ++ +G +++ + + L+S Y K G
Sbjct: 40 MQKTHTQLDAYTFPSLFKACTNLNLFSHGLSLHQSVVVNGLSHDSYIGSSLISFYAKFGC 99
Query: 282 LELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSA 341
+ L R+VFD +L+++V WT++IG Y++ G A ++FK++ ++ ++P TL + L
Sbjct: 100 IHLGRKVFDTMLKRNVVPWTTIIGSYSREGDIDIAFSMFKQMRESGIQPTSVTLLSLLPG 159
Query: 342 CAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVW 401
+ L + I+L+G ES+ + S+++M+ KCGRI A+ +F+ + +D+ W
Sbjct: 160 ---ISKLPLLLCLHCLIILHGFESDLALSNSMVNMYGKCGRIADARRLFQSIDCRDIVSW 216
Query: 402 SAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACS-----------HSGMV 450
+++++ Y+ G ++ L L M+ +E +KPD + S LSA + H M+
Sbjct: 217 NSLLSAYSKIGATEEILQLLQAMK-IEDIKPDKQTFCSALSASAIKGDLRLGKLVHGLML 275
Query: 451 DDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLS 510
DGL+ + ++S LV L R D A K + + E +W ++S
Sbjct: 276 KDGLNIDQHVES------------ALVVLYLRCRCLDPAYK-VFKSTTEKDVVMWTAMIS 322
Query: 511 ACMKH 515
+++
Sbjct: 323 GLVQN 327
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.320 0.134 0.397
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,194,987,181
Number of Sequences: 23463169
Number of extensions: 363661628
Number of successful extensions: 1033998
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 9103
Number of HSP's successfully gapped in prelim test: 2787
Number of HSP's that attempted gapping in prelim test: 828508
Number of HSP's gapped (non-prelim): 62163
length of query: 622
length of database: 8,064,228,071
effective HSP length: 149
effective length of query: 473
effective length of database: 8,863,183,186
effective search space: 4192285646978
effective search space used: 4192285646978
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 80 (35.4 bits)