BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 006997
(622 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9SN39|PP320_ARATH Pentatricopeptide repeat-containing protein At4g18750,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H45 PE=2
SV=1
Length = 871
Score = 425 bits (1092), Expect = e-118, Method: Compositional matrix adjust.
Identities = 221/613 (36%), Positives = 356/613 (58%), Gaps = 7/613 (1%)
Query: 6 TNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDA 65
+G F ++ + M+ +GV +S+TF V K+ +++ S+ G+++H +LK GF +
Sbjct: 171 AKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERN 230
Query: 66 FVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMW 125
V L+ Y K S+RKV DEM R V+SWNSII+ + L ++ + V +M
Sbjct: 231 SVGNSLVAFYLKNQRVDSARKVFDEMTER--DVISWNSIINGYVSNGLAEKGLSVFVQML 288
Query: 126 VLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGL---LNNEIPLANSVMSMYAKFGKVN 182
V G+E+ +T VSV +GC+ + IS+ V+ +G+ + E N+++ MY+K G ++
Sbjct: 289 VSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLD 348
Query: 183 EARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCA 242
A+++F E+ + S+VS+T++I GY G EA L +M ++PD+ ++ CA
Sbjct: 349 SAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCA 408
Query: 243 QVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTS 302
+ L +H + ++ + + N L+ MY KCG ++ A VF + K + W +
Sbjct: 409 RYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNT 468
Query: 303 MIGGYAQLGYPSEAVNLFKRLLKTS-VRPNEATLATTLSACAELGSLSKGKEIEEYIVLN 361
+IGGY++ Y +EA++LF LL+ P+E T+A L ACA L + KG+EI YI+ N
Sbjct: 469 IIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRN 528
Query: 362 GLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLF 421
G S+R V SL+ M++KCG + A +F+ + KDL W+ MI GY +HG G +A+ LF
Sbjct: 529 GYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALF 588
Query: 422 YKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLG 481
+M+ G++ D + + S+L ACSHSG+VD+G FF M+ IEP++EHY C+VD+L
Sbjct: 589 NQMRQA-GIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLA 647
Query: 482 RAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYIL 541
R G A + I MP+ A +W LL C HH+V+L E A+ + L P +TG Y+L
Sbjct: 648 RTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKVFELEPENTGYYVL 707
Query: 542 MANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKT 601
MAN++ A W++ R + R L K PG S +EI G V +FVAGD S+ + +I
Sbjct: 708 MANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFVAGDSSNPETENIEAF 767
Query: 602 LKELHIKLLEAGY 614
L+++ +++E GY
Sbjct: 768 LRKVRARMIEEGY 780
Score = 226 bits (575), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 136/426 (31%), Positives = 230/426 (53%), Gaps = 7/426 (1%)
Query: 32 TFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEM 91
T VL+ CA+ S+ DGK V + + GF D+ + + L MY+ C D + +V DE
Sbjct: 96 TLCSVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDE- 154
Query: 92 PVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVV-SGCSFRQ--- 147
V++ + WN +++ +++ +I + K+M G+E+ + TF V S S R
Sbjct: 155 -VKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHG 213
Query: 148 GISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYV 207
G +H + K G + NS+++ Y K +V+ AR +FDE+ E ++SW +II GYV
Sbjct: 214 GEQLHGFILKSGF-GERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYV 272
Query: 208 NVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDP 267
+ G + + QM + DL +++ GCA + L ++HS+ +K+ ++ ED
Sbjct: 273 SNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDR 332
Query: 268 LDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTS 327
N L+ MY+KCGDL+ A+ VF + ++SV +TSMI GYA+ G EAV LF+ + +
Sbjct: 333 FCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEG 392
Query: 328 VRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAK 387
+ P+ T+ L+ CA L +GK + E+I N L + V +L+ M++KCG + +A+
Sbjct: 393 ISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAE 452
Query: 388 EVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHS 447
VF + KD+ W+ +I GY+ + ++AL+LF + + PD +L AC+
Sbjct: 453 LVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASL 512
Query: 448 GMVDDG 453
D G
Sbjct: 513 SAFDKG 518
Score = 61.2 bits (147), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 92/206 (44%), Gaps = 6/206 (2%)
Query: 292 VLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKG 351
++SV + + + + G AV L K + P TL + L CA+ SL G
Sbjct: 56 TFDRSVTDANTQLRRFCESGNLENAVKLLCVSGKWDIDPR--TLCSVLQLCADSKSLKDG 113
Query: 352 KEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIH 411
KE++ +I NG + + + L M++ CG + +A VF+ V + W+ ++N A
Sbjct: 114 KEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMNELAKS 173
Query: 412 GMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKS-MQSNFGIEPSI 470
G ++ LF KM G++ D+ ++ + + S V G ++S FG S+
Sbjct: 174 GDFSGSIGLFKKMMS-SGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSV 232
Query: 471 EHYLCLVDLLGRAGRFDLALKTIHEM 496
+ LV + R D A K EM
Sbjct: 233 GN--SLVAFYLKNQRVDSARKVFDEM 256
>sp|Q9LTV8|PP224_ARATH Pentatricopeptide repeat-containing protein At3g12770
OS=Arabidopsis thaliana GN=PCMP-H43 PE=2 SV=1
Length = 694
Score = 404 bits (1038), Expect = e-111, Method: Compositional matrix adjust.
Identities = 211/602 (35%), Positives = 352/602 (58%), Gaps = 15/602 (2%)
Query: 24 TGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVS 83
+G+H +SF L+ A K++H+ +L +G Q F+ T LI S D
Sbjct: 16 SGIHSDSFYASLIDSATHKAQL----KQIHARLLVLGLQFSGFLITKLIHASSSFGDITF 71
Query: 84 SRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGC 143
+R+V D++P + WN+II +SR +A+L+ M + + + TF ++ C
Sbjct: 72 ARQVFDDLP--RPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKAC 129
Query: 144 S----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFD--EIGETSIV 197
S + G +H V++LG + ++ + N ++++YAK ++ AR++F+ + E +IV
Sbjct: 130 SGLSHLQMGRFVHAQVFRLGF-DADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIV 188
Query: 198 SWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLL 257
SWT I+ Y G EA + +QMR+M V PD V ++++ + +L S+H+ +
Sbjct: 189 SWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASV 248
Query: 258 LKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAV 317
+K G E L L +MY KCG + A+ +FD + ++ LW +MI GYA+ GY EA+
Sbjct: 249 VKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAI 308
Query: 318 NLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMF 377
++F ++ VRP+ ++ + +SACA++GSL + + + EY+ + + + ++LI MF
Sbjct: 309 DMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMF 368
Query: 378 SKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVY 437
+KCG + A+ VF+R D+D+ VWSAMI GY +HG +A++L+ M+ G+ P+ V +
Sbjct: 369 AKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMER-GGVHPNDVTF 427
Query: 438 TSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMP 497
+L AC+HSGMV +G FF M ++ I P +HY C++DLLGRAG D A + I MP
Sbjct: 428 LGLLMACNHSGMVREGWWFFNRM-ADHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMP 486
Query: 498 VEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAAT 557
V+ VW LLSAC KH +VELGEYAA+ L +++P +TG+Y+ ++NL+ +A +W A
Sbjct: 487 VQPGVTVWGALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAE 546
Query: 558 ARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKELHIKLLEAGYIAE 617
R M ++ L K+ G S VE+ G ++ F GD+SH +I + ++ + +L E G++A
Sbjct: 547 VRVRMKEKGLNKDVGCSWVEVRGRLEAFRVGDKSHPRYEEIERQVEWIESRLKEGGFVAN 606
Query: 618 AD 619
D
Sbjct: 607 KD 608
Score = 247 bits (630), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 151/492 (30%), Positives = 255/492 (51%), Gaps = 44/492 (8%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+IR + N F++ L YS+M V +SFTFP +LKAC+ ++ + G+ VH+ V ++G
Sbjct: 90 IIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLG 149
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F D FVQ GLI +Y+KC S+R V + +P+ R++VSW +I+SA+++ EA+ +
Sbjct: 150 FDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEI 209
Query: 121 LKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
+M + ++ VSV++ + +QG S+H V K+G L E L S+ +MYA
Sbjct: 210 FSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMG-LEIEPDLLISLNTMYA 268
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K G+V A+ +FD++ +++ W +I GY G EA + ++M V PD + +
Sbjct: 269 KCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITS 328
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
I CAQVG+L A SM+ + +S Y ++ + + L+ M+ KCG +E AR VFD L++
Sbjct: 329 AISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRD 388
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEE 356
V +W++MI GY G EA++L++ + + V PN+ T L AC G + +G
Sbjct: 389 VVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFN 448
Query: 357 YIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQ 416
+ + + +Q +I + + G +++A EV + +P
Sbjct: 449 RMADHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMP---------------------- 486
Query: 417 ALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPS-IEHYLC 475
++P V+ ++LSAC V+ G + Q F I+PS HY+
Sbjct: 487 -------------VQPGVTVWGALLSACKKHRHVELGE---YAAQQLFSIDPSNTGHYVQ 530
Query: 476 LVDLLGRAGRFD 487
L +L A +D
Sbjct: 531 LSNLYAAARLWD 542
>sp|Q9LFL5|PP390_ARATH Pentatricopeptide repeat-containing protein At5g16860
OS=Arabidopsis thaliana GN=PCMP-H92 PE=2 SV=1
Length = 850
Score = 399 bits (1024), Expect = e-110, Method: Compositional matrix adjust.
Identities = 232/670 (34%), Positives = 353/670 (52%), Gaps = 58/670 (8%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+IR+ +NG + L + M +++TFP V KAC I+S+ G+ H+ L G
Sbjct: 98 LIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHALSLVTG 157
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F + FV L+ MYS+C +RKV DEM V VVSWNSII ++++ A+ +
Sbjct: 158 FISNVFVGNALVAMYSRCRSLSDARKVFDEMSVW--DVVSWNSIIESYAKLGKPKVALEM 215
Query: 121 LKEMW-VLGLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMY 175
M G T V+V+ C + G +HC ++ N + N ++ MY
Sbjct: 216 FSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMF-VGNCLVDMY 274
Query: 176 AKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVN---------------------- 213
AK G ++EA ++F + +VSW ++ GY +G
Sbjct: 275 AKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWS 334
Query: 214 -------------EAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSL---- 256
EA G+C QM + P+ V ++++ GCA VG L +H
Sbjct: 335 AAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKY 394
Query: 257 ---LLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAV--LEKSVFLWTSMIGGYAQLG 311
L K+G+ +E+ + N L+ MY KC ++ AR +FD++ E+ V WT MIGGY+Q G
Sbjct: 395 PIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHG 454
Query: 312 YPSEAVNLFKRLLK--TSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQ- 368
++A+ L + + RPN T++ L ACA L +L GK+I Y + N +
Sbjct: 455 DANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPLF 514
Query: 369 VQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVE 428
V LI M++KCG I+ A+ VF+ + K+ W++++ GY +HG G++AL +F +M+ +
Sbjct: 515 VSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRI- 573
Query: 429 GLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDL 488
G K D V +L ACSHSGM+D G+ +F M++ FG+ P EHY CLVDLLGRAGR +
Sbjct: 574 GFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLLGRAGRLNA 633
Query: 489 ALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTS 548
AL+ I EMP+E VW LS C H VELGEYAA+ + L G+Y L++NL+ +
Sbjct: 634 ALRLIEEMPMEPPPVVWVAFLSCCRIHGKVELGEYAAEKITELASNHDGSYTLLSNLYAN 693
Query: 549 AGMWKEAATARGLMDDRRLTKEPGWSQVE-IDGSVQVFVAGDRSHHLSVDIRKTLKELHI 607
AG WK+ R LM + + K PG S VE I G+ FV GD++H + +I + L +
Sbjct: 694 AGRWKDVTRIRSLMRHKGVKKRPGCSWVEGIKGTTTFFV-GDKTHPHAKEIYQVLLDHMQ 752
Query: 608 KLLEAGYIAE 617
++ + GY+ E
Sbjct: 753 RIKDIGYVPE 762
Score = 173 bits (438), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 134/532 (25%), Positives = 228/532 (42%), Gaps = 56/532 (10%)
Query: 34 PLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPV 93
P + C I+ + K +H +L G + + LI Y + +L P
Sbjct: 32 PPFIHKCKTISQV---KLIHQKLLSFGILT-LNLTSHLISTYISVGCLSHAVSLLRRFPP 87
Query: 94 RLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGC----SFRQGI 149
V WNS+I ++ ++ + + M L TF V C S R G
Sbjct: 88 SDAGVYHWNSLIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGE 147
Query: 150 SMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNV 209
S H G ++N + + N++++MY++ +++AR +FDE+ +VSW +II Y +
Sbjct: 148 SAHALSLVTGFISN-VFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKL 206
Query: 210 GNVNEAFGLCNQM-RRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPL 268
G A + ++M PD + +N++ CA +G L +H + S +
Sbjct: 207 GKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFV 266
Query: 269 DNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLF-------- 320
N LV MY KCG ++ A VF + K V W +M+ GY+Q+G +AV LF
Sbjct: 267 GNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKI 326
Query: 321 ---------------------------KRLLKTSVRPNEATLATTLSACAELGSLSKGKE 353
+++L + ++PNE TL + LS CA +G+L GKE
Sbjct: 327 KMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKE 386
Query: 354 IEEYIV-------LNGLESNRQVQTSLIHMFSKCGRINKAKEVFERV--PDKDLAVWSAM 404
I Y + NG V LI M++KC +++ A+ +F+ + ++D+ W+ M
Sbjct: 387 IHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVM 446
Query: 405 INGYAIHGMGDQALNLFYKMQHVE-GLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSN 463
I GY+ HG ++AL L +M + +P+A + L AC+ + G N
Sbjct: 447 IGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRN 506
Query: 464 FGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKH 515
+ CL+D+ + G A M + + W L++ H
Sbjct: 507 QQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEV-TWTSLMTGYGMH 557
>sp|O49619|PP350_ARATH Pentatricopeptide repeat-containing protein At4g35130,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H27 PE=3
SV=1
Length = 804
Score = 393 bits (1009), Expect = e-108, Method: Compositional matrix adjust.
Identities = 210/600 (35%), Positives = 348/600 (58%), Gaps = 18/600 (3%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI+ T+ G + E + YS M+ GV ++FT+P V+K+ A I+S+ +GK++H+ V+K+G
Sbjct: 101 MIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTYPFVIKSVAGISSLEEGKKIHAMVIKLG 160
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F D +V LI +Y K + KV +EMP R +VSWNS+IS + ++++
Sbjct: 161 FVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPER--DIVSWNSMISGYLALGDGFSSLML 218
Query: 121 LKEMWVLGLELSASTFVSVVSGCSF----RQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
KEM G + + +S + CS + G +HC + + ++ + S++ MY+
Sbjct: 219 FKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVRSRIETGDVMVMTSILDMYS 278
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMS----VTPDLV 232
K+G+V+ A IF+ + + +IV+W +IG Y G V +AF LC Q +MS + PD++
Sbjct: 279 KYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAF-LCFQ--KMSEQNGLQPDVI 335
Query: 233 VFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAV 292
+NL+ A + ++H ++ G+ L+ L+ MY +CG L+ A +FD +
Sbjct: 336 TSINLLPASA----ILEGRTIHGYAMRRGFLPHMVLETALIDMYGECGQLKSAEVIFDRM 391
Query: 293 LEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGK 352
EK+V W S+I Y Q G A+ LF+ L +S+ P+ T+A+ L A AE SLS+G+
Sbjct: 392 AEKNVISWNSIIAAYVQNGKNYSALELFQELWDSSLVPDSTTIASILPAYAESLSLSEGR 451
Query: 353 EIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHG 412
EI YIV + SN + SL+HM++ CG + A++ F + KD+ W+++I YA+HG
Sbjct: 452 EIHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDARKCFNHILLKDVVSWNSIIMAYAVHG 511
Query: 413 MGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEH 472
G ++ LF +M + P+ + S+L+ACS SGMVD+G +F+SM+ +GI+P IEH
Sbjct: 512 FGRISVWLFSEMI-ASRVNPNKSTFASLLAACSISGMVDEGWEYFESMKREYGIDPGIEH 570
Query: 473 YLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLN 532
Y C++DL+GR G F A + + EMP A++W LL+A H ++ + E+AA+ + +
Sbjct: 571 YGCMLDLIGRTGNFSAAKRFLEEMPFVPTARIWGSLLNASRNHKDITIAEFAAEQIFKME 630
Query: 533 PGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSH 592
+TG Y+L+ N++ AG W++ + LM+ + +++ S VE G VF GDRSH
Sbjct: 631 HDNTGCYVLLLNMYAEAGRWEDVNRIKLLMESKGISRTSSRSTVEAKGKSHVFTNGDRSH 690
Score = 137 bits (346), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 93/347 (26%), Positives = 170/347 (48%), Gaps = 7/347 (2%)
Query: 166 PLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRM 225
P + +A + +A +FDE+ + W +I G+ + G EA ++M
Sbjct: 65 PALTRALRGFADSRLMEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFA 124
Query: 226 SVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELA 285
V D + +I A + +L +H++++K G+ ++ + N L+S+Y K G A
Sbjct: 125 GVKADTFTYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDA 184
Query: 286 RRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAEL 345
+VF+ + E+ + W SMI GY LG ++ LFK +LK +P+ + + L AC+ +
Sbjct: 185 EKVFEEMPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHV 244
Query: 346 GSLSKGKEIEEYIVLNGLES-NRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAM 404
S GKEI + V + +E+ + V TS++ M+SK G ++ A+ +F + +++ W+ M
Sbjct: 245 YSPKMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVM 304
Query: 405 INGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNF 464
I YA +G A F KM GL+PD + ++L A S +++ +M+
Sbjct: 305 IGCYARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPA---SAILEGRTIHGYAMRR-- 359
Query: 465 GIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSA 511
G P + L+D+ G G+ A + I + E W +++A
Sbjct: 360 GFLPHMVLETALIDMYGECGQLKSA-EVIFDRMAEKNVISWNSIIAA 405
>sp|O81767|PP348_ARATH Pentatricopeptide repeat-containing protein At4g33990
OS=Arabidopsis thaliana GN=EMB2758 PE=3 SV=2
Length = 823
Score = 391 bits (1005), Expect = e-108, Method: Compositional matrix adjust.
Identities = 216/629 (34%), Positives = 364/629 (57%), Gaps = 20/629 (3%)
Query: 1 MIRNSTNNGSFEETLSTYS-SMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKV 59
MI G+ E + +S ML +G+ + TFP VLKAC ++ DG ++H LK
Sbjct: 123 MISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKAC---RTVIDGNKIHCLALKF 179
Query: 60 GFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAIL 119
GF D +V LI +YS+ ++R + DEMPVR + SWN++IS + ++ EA+
Sbjct: 180 GFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVR--DMGSWNAMISGYCQSGNAKEALT 237
Query: 120 VLKEMWVLGLE-LSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSM 174
+ GL + + T VS++S C+ F +G+++H K GL +E+ ++N ++ +
Sbjct: 238 LSN-----GLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGL-ESELFVSNKLIDL 291
Query: 175 YAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVF 234
YA+FG++ + + +FD + ++SW +II Y A L +MR + PD +
Sbjct: 292 YAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTL 351
Query: 235 LNLILGCAQVGNLFLALSMHSLLLKSGYNNED-PLDNLLVSMYTKCGDLELARRVFDAVL 293
++L +Q+G++ S+ L+ G+ ED + N +V MY K G ++ AR VF+ +
Sbjct: 352 ISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLP 411
Query: 294 EKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKT-SVRPNEATLATTLSACAELGSLSKGK 352
V W ++I GYAQ G+ SEA+ ++ + + + N+ T + L AC++ G+L +G
Sbjct: 412 NTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGM 471
Query: 353 EIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHG 412
++ ++ NGL + V TSL M+ KCGR+ A +F ++P + W+ +I + HG
Sbjct: 472 KLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHG 531
Query: 413 MGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEH 472
G++A+ LF +M EG+KPD + + ++LSACSHSG+VD+G F+ MQ+++GI PS++H
Sbjct: 532 HGEKAVMLFKEMLD-EGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKH 590
Query: 473 YLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLN 532
Y C+VD+ GRAG+ + ALK I M ++ A +W LLSAC H NV+LG+ A+++L +
Sbjct: 591 YGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVE 650
Query: 533 PGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSH 592
P G ++L++N++ SAG W+ R + + L K PGWS +E+D V+VF G+++H
Sbjct: 651 PEHVGYHVLLSNMYASAGKWEGVDEIRSIAHGKGLRKTPGWSSMEVDNKVEVFYTGNQTH 710
Query: 593 HLSVDIRKTLKELHIKLLEAGYIAEADIV 621
+ ++ + L L KL GY+ + V
Sbjct: 711 PMYEEMYRELTALQAKLKMIGYVPDHRFV 739
Score = 127 bits (318), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 84/288 (29%), Positives = 148/288 (51%), Gaps = 15/288 (5%)
Query: 165 IPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRR 224
+ ++ ++++Y G V AR FD I + +W +I GY GN +E C +
Sbjct: 86 VCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISGYGRAGNSSEVI-RCFSLFM 144
Query: 225 MS--VTPDLVVFLNLILGCAQV--GNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCG 280
+S +TPD F +++ C V GN +H L LK G+ + + L+ +Y++
Sbjct: 145 LSSGLTPDYRTFPSVLKACRTVIDGN-----KIHCLALKFGFMWDVYVAASLIHLYSRYK 199
Query: 281 DLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLS 340
+ AR +FD + + + W +MI GY Q G EA+ L L + T+ + LS
Sbjct: 200 AVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGLRAM----DSVTVVSLLS 255
Query: 341 ACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAV 400
AC E G ++G I Y + +GLES V LI ++++ GR+ ++VF+R+ +DL
Sbjct: 256 ACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLIS 315
Query: 401 WSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSG 448
W+++I Y ++ +A++LF +M+ + ++PD + S+ S S G
Sbjct: 316 WNSIIKAYELNEQPLRAISLFQEMR-LSRIQPDCLTLISLASILSQLG 362
Score = 107 bits (267), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 76/256 (29%), Positives = 123/256 (48%), Gaps = 12/256 (4%)
Query: 246 NLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIG 305
NL A +H+ L+ S + LV++Y G++ LAR FD + + V+ W MI
Sbjct: 66 NLQSAKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMIS 125
Query: 306 GYAQLGYPSEAVNLFKR-LLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLE 364
GY + G SE + F +L + + P+ T + L AC ++ G +I + G
Sbjct: 126 GYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACR---TVIDGNKIHCLALKFGFM 182
Query: 365 SNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKM 424
+ V SLIH++S+ + A+ +F+ +P +D+ W+AMI+GY G +AL L
Sbjct: 183 WDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTL---- 238
Query: 425 QHVEGLKP-DAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRA 483
GL+ D+V S+LSAC+ +G + G++ S G+E + L+DL
Sbjct: 239 --SNGLRAMDSVTVVSLLSACTEAGDFNRGVT-IHSYSIKHGLESELFVSNKLIDLYAEF 295
Query: 484 GRFDLALKTIHEMPVE 499
GR K M V
Sbjct: 296 GRLRDCQKVFDRMYVR 311
Score = 54.3 bits (129), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 77/188 (40%), Gaps = 12/188 (6%)
Query: 347 SLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMIN 406
+L K + +V++ N + L++++ G + A+ F+ + ++D+ W+ MI+
Sbjct: 66 NLQSAKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMIS 125
Query: 407 GYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGI 466
GY G + + F GL PD + S+L AC V DG + + FG
Sbjct: 126 GYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACR---TVIDG-NKIHCLALKFGF 181
Query: 467 EPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAK 526
+ L+ L R A EMPV W ++S + N AK
Sbjct: 182 MWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGS-WNAMISGYCQSGN-------AK 233
Query: 527 NLLTLNPG 534
LTL+ G
Sbjct: 234 EALTLSNG 241
>sp|P0C8Q2|PP323_ARATH Pentatricopeptide repeat-containing protein At4g19191,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E1 PE=2
SV=1
Length = 654
Score = 388 bits (996), Expect = e-107, Method: Compositional matrix adjust.
Identities = 204/598 (34%), Positives = 335/598 (56%), Gaps = 11/598 (1%)
Query: 2 IRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGF 61
IR + N E+L + M + G N+FTFP V KACA + + + VH+H++K F
Sbjct: 24 IREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARLADVGCCEMVHAHLIKSPF 83
Query: 62 QQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVL 121
D FV T +DM+ KC+ + KV + MP R +WN+++S ++ D+A +
Sbjct: 84 WSDVFVGTATVDMFVKCNSVDYAAKVFERMPER--DATTWNAMLSGFCQSGHTDKAFSLF 141
Query: 122 KEMWVLGLELSASTFVSVVSGCSFRQGI----SMHCCVYKLGLLNNEIPLANSVMSMYAK 177
+EM + + + T ++++ SF + + +MH +LG+ + ++ +AN+ +S Y K
Sbjct: 142 REMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGV-DVQVTVANTWISTYGK 200
Query: 178 FGKVNEARSIFDEI--GETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFL 235
G ++ A+ +F+ I G+ ++VSW ++ Y G +AFGL M R PDL F+
Sbjct: 201 CGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPDLSTFI 260
Query: 236 NLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEK 295
NL C L +HS + G + + N +SMY+K D AR +FD + +
Sbjct: 261 NLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSARLLFDIMTSR 320
Query: 296 SVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIE 355
+ WT MI GYA+ G EA+ LF ++K+ +P+ TL + +S C + GSL GK I+
Sbjct: 321 TCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETGKWID 380
Query: 356 EYIVLNGLE-SNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMG 414
+ G + N + +LI M+SKCG I++A+++F+ P+K + W+ MI GYA++G+
Sbjct: 381 ARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTPEKTVVTWTTMIAGYALNGIF 440
Query: 415 DQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYL 474
+AL LF KM ++ KP+ + + ++L AC+HSG ++ G +F M+ + I P ++HY
Sbjct: 441 LEALKLFSKMIDLD-YKPNHITFLAVLQACAHSGSLEKGWEYFHIMKQVYNISPGLDHYS 499
Query: 475 CLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPG 534
C+VDLLGR G+ + AL+ I M + A +W LL+AC H NV++ E AA++L L P
Sbjct: 500 CMVDLLGRKGKLEEALELIRNMSAKPDAGIWGALLNACKIHRNVKIAEQAAESLFNLEPQ 559
Query: 535 STGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSH 592
Y+ MAN++ +AGMW A R +M R + K PG S ++++G F G+ H
Sbjct: 560 MAAPYVEMANIYAAAGMWDGFARIRSIMKQRNIKKYPGESVIQVNGKNHSFTVGEHGH 617
Score = 180 bits (456), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 138/486 (28%), Positives = 235/486 (48%), Gaps = 35/486 (7%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
M+ +G ++ S + M + +S T ++++ + S+ + +H+ +++G
Sbjct: 124 MLSGFCQSGHTDKAFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLG 183
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAI-- 118
V I Y KC D S++ V + + R+VVSWNS+ A+S +A
Sbjct: 184 VDVQVTVANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGL 243
Query: 119 --LVLKEMWVLGLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVM 172
L+L+E + L STF+++ + C + QG +H LG + +I N+ +
Sbjct: 244 YCLMLREEFKPDL----STFINLAASCQNPETLTQGRLIHSHAIHLG-TDQDIEAINTFI 298
Query: 173 SMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLV 232
SMY+K AR +FD + + VSWT +I GY G+++EA L + M + PDLV
Sbjct: 299 SMYSKSEDTCSARLLFDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLV 358
Query: 233 VFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLD-NLLVSMYTKCGDLELARRVFDA 291
L+LI GC + G+L + + G ++ + N L+ MY+KCG + AR +FD
Sbjct: 359 TLLSLISGCGKFGSLETGKWIDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDN 418
Query: 292 VLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKG 351
EK+V WT+MI GYA G EA+ LF +++ +PN T L ACA GSL KG
Sbjct: 419 TPEKTVVTWTTMIAGYALNGIFLEALKLFSKMIDLDYKPNHITFLAVLQACAHSGSLEKG 478
Query: 352 KEI-----EEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDK-DLAVWSAMI 405
E + Y + GL+ + ++ + + G++ +A E+ + K D +W A++
Sbjct: 479 WEYFHIMKQVYNISPGLDH----YSCMVDLLGRKGKLEEALELIRNMSAKPDAGIWGALL 534
Query: 406 NGYAIH---GMGDQALNLFYKMQHVEGLKPD-AVVYTSILSACSHSGMVDDGLSFFKSMQ 461
N IH + +QA + L+P A Y + + + +GM DG + +S+
Sbjct: 535 NACKIHRNVKIAEQAAESLF------NLEPQMAAPYVEMANIYAAAGMW-DGFARIRSIM 587
Query: 462 SNFGIE 467
I+
Sbjct: 588 KQRNIK 593
Score = 110 bits (274), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 69/289 (23%), Positives = 138/289 (47%), Gaps = 4/289 (1%)
Query: 185 RSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQV 244
R ++ G +S+ +W I VN + E+ L +M+R P+ F + CA++
Sbjct: 6 RRLYRISGLSSVNAWNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARL 65
Query: 245 GNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMI 304
++ +H+ L+KS + ++ + V M+ KC ++ A +VF+ + E+ W +M+
Sbjct: 66 ADVGCCEMVHAHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAML 125
Query: 305 GGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLE 364
G+ Q G+ +A +LF+ + + P+ T+ T + + + SL + + + G++
Sbjct: 126 SGFCQSGHTDKAFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVD 185
Query: 365 SNRQVQTSLIHMFSKCGRINKAKEVFERVP--DKDLAVWSAMINGYAIHGMGDQALNLFY 422
V + I + KCG ++ AK VFE + D+ + W++M Y++ G A L+
Sbjct: 186 VQVTVANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYC 245
Query: 423 KMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIE 471
M E KPD + ++ ++C + + G S + G + IE
Sbjct: 246 LMLR-EEFKPDLSTFINLAASCQNPETLTQG-RLIHSHAIHLGTDQDIE 292
>sp|Q3E6Q1|PPR32_ARATH Pentatricopeptide repeat-containing protein At1g11290
OS=Arabidopsis thaliana GN=PCMP-H40 PE=2 SV=1
Length = 809
Score = 382 bits (981), Expect = e-105, Method: Compositional matrix adjust.
Identities = 214/624 (34%), Positives = 347/624 (55%), Gaps = 6/624 (0%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
M++ ++ L + M V + F +LK C + + GK +H ++K G
Sbjct: 106 MLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSG 165
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F D F TGL +MY+KC +RKV D MP R +VSWN+I++ +S+ + A+ +
Sbjct: 166 FSLDLFAMTGLENMYAKCRQVNEARKVFDRMPER--DLVSWNTIVAGYSQNGMARMALEM 223
Query: 121 LKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGL---LNNEIPLANSVMSMYAK 177
+K M L+ S T VSV+ S + IS+ ++ + ++ + ++ +++ MYAK
Sbjct: 224 VKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAK 283
Query: 178 FGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNL 237
G + AR +FD + E ++VSW ++I YV N EA + +M V P V +
Sbjct: 284 CGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGA 343
Query: 238 ILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSV 297
+ CA +G+L +H L ++ G + + N L+SMY KC +++ A +F + +++
Sbjct: 344 LHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTL 403
Query: 298 FLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEY 357
W +MI G+AQ G P +A+N F ++ +V+P+ T + ++A AEL K I
Sbjct: 404 VSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGV 463
Query: 358 IVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQA 417
++ + L+ N V T+L+ M++KCG I A+ +F+ + ++ + W+AMI+GY HG G A
Sbjct: 464 VMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAA 523
Query: 418 LNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLV 477
L LF +MQ +KP+ V + S++SACSHSG+V+ GL F M+ N+ IE S++HY +V
Sbjct: 524 LELFEEMQK-GTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMV 582
Query: 478 DLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTG 537
DLLGRAGR + A I +MPV+ V+ +L AC H NV E AA+ L LNP G
Sbjct: 583 DLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFELNPDDGG 642
Query: 538 NYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVD 597
++L+AN++ +A MW++ R M + L K PG S VEI V F +G +H S
Sbjct: 643 YHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMVEIKNEVHSFFSGSTAHPDSKK 702
Query: 598 IRKTLKELHIKLLEAGYIAEADIV 621
I L++L + EAGY+ + ++V
Sbjct: 703 IYAFLEKLICHIKEAGYVPDTNLV 726
Score = 210 bits (535), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 136/501 (27%), Positives = 247/501 (49%), Gaps = 25/501 (4%)
Query: 26 VHGNSFTFP--LVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVS 83
+ N + P L+L+ C+++ + +++ V K G Q+ F QT L+ ++ +
Sbjct: 31 IPANVYEHPAALLLERCSSLKEL---RQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDE 87
Query: 84 SRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGC 143
+ +V + P+ + V +++++ ++ D+A+ M +E F ++ C
Sbjct: 88 AARVFE--PIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVC 145
Query: 144 ----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSW 199
R G +H + K G + ++ + +MYAK +VNEAR +FD + E +VSW
Sbjct: 146 GDEAELRVGKEIHGLLVKSGF-SLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSW 204
Query: 200 TTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLK 259
TI+ GY G A + M ++ P + ++++ + + + + +H ++
Sbjct: 205 NTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMR 264
Query: 260 SGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNL 319
SG+++ + LV MY KCG LE AR++FD +LE++V W SMI Y Q P EA+ +
Sbjct: 265 SGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLI 324
Query: 320 FKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSK 379
F+++L V+P + ++ L ACA+LG L +G+ I + V GL+ N V SLI M+ K
Sbjct: 325 FQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCK 384
Query: 380 CGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTS 439
C ++ A +F ++ + L W+AMI G+A +G ALN F +M+ +KPD Y S
Sbjct: 385 CKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRS-RTVKPDTFTYVS 443
Query: 440 ILSA-----CSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIH 494
+++A +H G+ + N + + LVD+ + G +A + I
Sbjct: 444 VITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTA------LVDMYAKCGAIMIA-RLIF 496
Query: 495 EMPVEVQAQVWAPLLSACMKH 515
+M E W ++ H
Sbjct: 497 DMMSERHVTTWNAMIDGYGTH 517
>sp|Q9FLZ9|PP405_ARATH Pentatricopeptide repeat-containing protein At5g39350
OS=Arabidopsis thaliana GN=PCMP-E16 PE=2 SV=1
Length = 677
Score = 377 bits (968), Expect = e-103, Method: Compositional matrix adjust.
Identities = 204/587 (34%), Positives = 327/587 (55%), Gaps = 12/587 (2%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVH--GNSFTFPLVLKACANINSIWDGKRVHSHVLK 58
+IR G + + +S + M+ GV + +T+P V KA + S+ G VH +L+
Sbjct: 86 VIRMYVREGLYHDAISVFIRMVSEGVKCVPDGYTYPFVAKAAGELKSMKLGLVVHGRILR 145
Query: 59 VGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAI 118
F +D +VQ L+ MY +R V D M + R V+SWN++IS + R ++A+
Sbjct: 146 SWFGRDKYVQNALLAMYMNFGKVEMARDVFDVM--KNRDVISWNTMISGYYRNGYMNDAL 203
Query: 119 LVLKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKL---GLLNNEIPLANSVMSMY 175
++ M ++L +T VS++ C + + M V+KL L ++I + N++++MY
Sbjct: 204 MMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVKNALVNMY 263
Query: 176 AKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFL 235
K G+++EAR +FD + +++WT +I GY G+V A LC M+ V P+ V
Sbjct: 264 LKCGRMDEARFVFDRMERRDVITWTCMINGYTEDGDVENALELCRLMQFEGVRPNAVTIA 323
Query: 236 NLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEK 295
+L+ C + +H ++ ++ ++ L+SMY KC ++L RVF +
Sbjct: 324 SLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIETSLISMYAKCKRVDLCFRVFSGASKY 383
Query: 296 SVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIE 355
W+++I G Q S+A+ LFKR+ + V PN ATL + L A A L L + I
Sbjct: 384 HTGPWSAIIAGCVQNELVSDALGLFKRMRREDVEPNIATLNSLLPAYAALADLRQAMNIH 443
Query: 356 EYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVF----ERVPDKDLAVWSAMINGYAIH 411
Y+ G S+ T L+H++SKCG + A ++F E+ KD+ +W A+I+GY +H
Sbjct: 444 CYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGMH 503
Query: 412 GMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIE 471
G G AL +F +M G+ P+ + +TS L+ACSHSG+V++GL+ F+ M ++
Sbjct: 504 GDGHNALQVFMEMVR-SGVTPNEITFTSALNACSHSGLVEEGLTLFRFMLEHYKTLARSN 562
Query: 472 HYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTL 531
HY C+VDLLGRAGR D A I +P E + VW LL+AC+ H NV+LGE AA L L
Sbjct: 563 HYTCIVDLLGRAGRLDEAYNLITTIPFEPTSTVWGALLAACVTHENVQLGEMAANKLFEL 622
Query: 532 NPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEI 578
P +TGNY+L+AN++ + G WK+ R +M++ L K+PG S +EI
Sbjct: 623 EPENTGNYVLLANIYAALGRWKDMEKVRSMMENVGLRKKPGHSTIEI 669
Score = 183 bits (465), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 135/492 (27%), Positives = 237/492 (48%), Gaps = 15/492 (3%)
Query: 33 FPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMP 92
+ +L A SI K +H HV+ G + + + L Y+ C +RK+ +EMP
Sbjct: 18 YQSLLNHFAATQSISKTKALHCHVI-TGGRVSGHILSTLSVTYALCGHITYARKLFEEMP 76
Query: 93 VRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSAS----TFVSVVSG--CSFR 146
S++S+N +I + R L +AI V M G++ FV+ +G S +
Sbjct: 77 --QSSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGYTYPFVAKAAGELKSMK 134
Query: 147 QGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGY 206
G+ +H + + + + N++++MY FGKV AR +FD + ++SW T+I GY
Sbjct: 135 LGLVVHGRILR-SWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMKNRDVISWNTMISGY 193
Query: 207 VNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNED 266
G +N+A + + M SV D ++++ C + +L + ++H L+ + ++
Sbjct: 194 YRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKI 253
Query: 267 PLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKT 326
+ N LV+MY KCG ++ AR VFD + + V WT MI GY + G A+ L + +
Sbjct: 254 EVKNALVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTEDGDVENALELCRLMQFE 313
Query: 327 SVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKA 386
VRPN T+A+ +S C + ++ GK + + V + S+ ++TSLI M++KC R++
Sbjct: 314 GVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIETSLISMYAKCKRVDLC 373
Query: 387 KEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSH 446
VF WSA+I G + + AL LF +M+ E ++P+ S+L A +
Sbjct: 374 FRVFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRR-EDVEPNIATLNSLLPAYAA 432
Query: 447 SGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKT---IHEMPVEVQAQ 503
+ ++ + + G S++ LV + + G + A K I E
Sbjct: 433 LADLRQAMNIHCYL-TKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVV 491
Query: 504 VWAPLLSACMKH 515
+W L+S H
Sbjct: 492 LWGALISGYGMH 503
>sp|Q9ZUW3|PP172_ARATH Pentatricopeptide repeat-containing protein At2g27610
OS=Arabidopsis thaliana GN=PCMP-H60 PE=2 SV=1
Length = 868
Score = 375 bits (963), Expect = e-103, Method: Compositional matrix adjust.
Identities = 211/625 (33%), Positives = 349/625 (55%), Gaps = 18/625 (2%)
Query: 3 RNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQ 62
RNS N +E L+ + M G NSFTF L A G +VH+ V+K G
Sbjct: 171 RNSMN----DEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLD 226
Query: 63 QDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLK 122
+ V LI++Y KC + +R + D+ V+ SVV+WNS+IS ++ L+ EA+ +
Sbjct: 227 KTIPVSNSLINLYLKCGNVRKARILFDKTEVK--SVVTWNSMISGYAANGLDLEALGMFY 284
Query: 123 EMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKF 178
M + + LS S+F SV+ C+ R +HC V K G L ++ + ++M Y+K
Sbjct: 285 SMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQ-NIRTALMVAYSKC 343
Query: 179 GKVNEARSIFDEIGET-SIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNL 237
+ +A +F EIG ++VSWT +I G++ EA L ++M+R V P+ + ++
Sbjct: 344 TAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTY-SV 402
Query: 238 ILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSV 297
IL V +H+ ++K+ Y + L+ Y K G +E A +VF + +K +
Sbjct: 403 ILTALPV---ISPSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDI 459
Query: 298 FLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAEL-GSLSKGKEIEE 356
W++M+ GYAQ G A+ +F L K ++PNE T ++ L+ CA S+ +GK+
Sbjct: 460 VAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHG 519
Query: 357 YIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQ 416
+ + + L+S+ V ++L+ M++K G I A+EVF+R +KDL W++MI+GYA HG +
Sbjct: 520 FAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMK 579
Query: 417 ALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCL 476
AL++F +M+ +K D V + + +AC+H+G+V++G +F M + I P+ EH C+
Sbjct: 580 ALDVFKEMKK-RKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCM 638
Query: 477 VDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGST 536
VDL RAG+ + A+K I MP + +W +L+AC H ELG AA+ ++ + P +
Sbjct: 639 VDLYSRAGQLEKAMKVIENMPNPAGSTIWRTILAACRVHKKTELGRLAAEKIIAMKPEDS 698
Query: 537 GNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSV 596
Y+L++N++ +G W+E A R LM++R + KEPG+S +E+ F+AGDRSH L
Sbjct: 699 AAYVLLSNMYAESGDWQERAKVRKLMNERNVKKEPGYSWIEVKNKTYSFLAGDRSHPLKD 758
Query: 597 DIRKTLKELHIKLLEAGYIAEADIV 621
I L++L +L + GY + V
Sbjct: 759 QIYMKLEDLSTRLKDLGYEPDTSYV 783
Score = 226 bits (575), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 154/521 (29%), Positives = 264/521 (50%), Gaps = 26/521 (4%)
Query: 6 TNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDA 65
+ +G +E + ++ + G+ + F VLK A + G+++H +K GF D
Sbjct: 69 SRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKVSATLCDELFGRQLHCQCIKFGFLDDV 128
Query: 66 FVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMW 125
V T L+D Y K S+F RKV DEM + R+VV+W ++IS ++R +NDE + + M
Sbjct: 129 SVGTSLVDTYMKGSNFKDGRKVFDEM--KERNVVTWTTLISGYARNSMNDEVLTLFMRMQ 186
Query: 126 VLGLELSASTFVSVV-----SGCSFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGK 180
G + ++ TF + + G R G+ +H V K G L+ IP++NS++++Y K G
Sbjct: 187 NEGTQPNSFTFAAALGVLAEEGVGGR-GLQVHTVVVKNG-LDKTIPVSNSLINLYLKCGN 244
Query: 181 VNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILG 240
V +AR +FD+ S+V+W ++I GY G EA G+ MR V F ++I
Sbjct: 245 VRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKL 304
Query: 241 CAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAV-LEKSVFL 299
CA + L +H ++K G+ + + L+ Y+KC + A R+F + +V
Sbjct: 305 CANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVS 364
Query: 300 WTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIV 359
WT+MI G+ Q EAV+LF + + VRPNE T + L+A + E+ +V
Sbjct: 365 WTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPVISP----SEVHAQVV 420
Query: 360 LNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALN 419
E + V T+L+ + K G++ +A +VF + DKD+ WSAM+ GYA G + A+
Sbjct: 421 KTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIK 480
Query: 420 LFYKMQHVEGLKPDAVVYTSILSACSHSGM-VDDGLSFFKSMQSNFGIEPSIEHYLC--- 475
+F ++ G+KP+ ++SIL+ C+ + + G F F I+ ++ LC
Sbjct: 481 MFGELTK-GGIKPNEFTFSSILNVCAATNASMGQGKQF-----HGFAIKSRLDSSLCVSS 534
Query: 476 -LVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKH 515
L+ + + G + A + + + E W ++S +H
Sbjct: 535 ALLTMYAKKGNIESA-EEVFKRQREKDLVSWNSMISGYAQH 574
Score = 171 bits (432), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 108/370 (29%), Positives = 196/370 (52%), Gaps = 9/370 (2%)
Query: 79 SDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVS 138
S ++ + D+ P R R S+ S++ SR EA + + LG+E+ S F S
Sbjct: 41 SRLYNAHNLFDKSPGRDRE--SYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSS 98
Query: 139 VV----SGCSFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGET 194
V+ + C G +HC K G L+ ++ + S++ Y K + R +FDE+ E
Sbjct: 99 VLKVSATLCDELFGRQLHCQCIKFGFLD-DVSVGTSLVDTYMKGSNFKDGRKVFDEMKER 157
Query: 195 SIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMH 254
++V+WTT+I GY +E L +M+ P+ F + A+ G L +H
Sbjct: 158 NVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVH 217
Query: 255 SLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPS 314
++++K+G + P+ N L+++Y KCG++ AR +FD KSV W SMI GYA G
Sbjct: 218 TVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDL 277
Query: 315 EAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLI 374
EA+ +F + VR +E++ A+ + CA L L +++ +V G ++ ++T+L+
Sbjct: 278 EALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALM 337
Query: 375 HMFSKCGRINKAKEVFERVP-DKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPD 433
+SKC + A +F+ + ++ W+AMI+G+ + ++A++LF +M+ +G++P+
Sbjct: 338 VAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKR-KGVRPN 396
Query: 434 AVVYTSILSA 443
Y+ IL+A
Sbjct: 397 EFTYSVILTA 406
Score = 167 bits (423), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 106/414 (25%), Positives = 205/414 (49%), Gaps = 5/414 (1%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI NG E L + SM V + +F V+K CAN+ + +++H V+K G
Sbjct: 266 MISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYG 325
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F D ++T L+ YSKC+ + + ++ E+ + +VVSW ++IS + +EA+ +
Sbjct: 326 FLFDQNIRTALMVAYSKCTAMLDALRLFKEIGC-VGNVVSWTAMISGFLQNDGKEEAVDL 384
Query: 121 LKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGK 180
EM G+ + T+ +++ +H V K + + +++ Y K GK
Sbjct: 385 FSEMKRKGVRPNEFTYSVILTALPVISPSEVHAQVVKTNYERSST-VGTALLDAYVKLGK 443
Query: 181 VNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILG 240
V EA +F I + IV+W+ ++ GY G A + ++ + + P+ F +++
Sbjct: 444 VEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNV 503
Query: 241 CAQV-GNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFL 299
CA ++ H +KS ++ + + L++MY K G++E A VF EK +
Sbjct: 504 CAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVS 563
Query: 300 WTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIV 359
W SMI GYAQ G +A+++FK + K V+ + T +AC G + +G++ + +V
Sbjct: 564 WNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMV 623
Query: 360 LN-GLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDK-DLAVWSAMINGYAIH 411
+ + ++ + ++ ++S+ G++ KA +V E +P+ +W ++ +H
Sbjct: 624 RDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIENMPNPAGSTIWRTILAACRVH 677
Score = 135 bits (340), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 77/274 (28%), Positives = 144/274 (52%), Gaps = 6/274 (2%)
Query: 178 FGKVNEAR-----SIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLV 232
FG V+ +R ++FD+ S+ +++ G+ G EA L + R+ + D
Sbjct: 35 FGTVSSSRLYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCS 94
Query: 233 VFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAV 292
+F +++ A + + +H +K G+ ++ + LV Y K + + R+VFD +
Sbjct: 95 IFSSVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEM 154
Query: 293 LEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGK 352
E++V WT++I GYA+ E + LF R+ +PN T A L AE G +G
Sbjct: 155 KERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGL 214
Query: 353 EIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHG 412
++ +V NGL+ V SLI+++ KCG + KA+ +F++ K + W++MI+GYA +G
Sbjct: 215 QVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANG 274
Query: 413 MGDQALNLFYKMQHVEGLKPDAVVYTSILSACSH 446
+ +AL +FY M+ + ++ + S++ C++
Sbjct: 275 LDLEALGMFYSMR-LNYVRLSESSFASVIKLCAN 307
>sp|Q9SVA5|PP357_ARATH Pentatricopeptide repeat-containing protein At4g39530
OS=Arabidopsis thaliana GN=PCMP-E52 PE=1 SV=1
Length = 834
Score = 374 bits (960), Expect = e-102, Method: Compositional matrix adjust.
Identities = 204/616 (33%), Positives = 343/616 (55%), Gaps = 12/616 (1%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI G +L + +++ V + + VL AC+ + + GK++H+H+L+ G
Sbjct: 220 MISGCVKMGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYG 279
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+ DA + LID Y KC +++ K+ + MP + +++SW +++S + + L+ EA+ +
Sbjct: 280 LEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNK--NIISWTTLLSGYKQNALHKEAMEL 337
Query: 121 LKEMWVLGLELSASTFVSVVSGCSFRQ----GISMHCCVYKLGLLNNEIPLANSVMSMYA 176
M GL+ S+++ C+ G +H K L N+ + NS++ MYA
Sbjct: 338 FTSMSKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANL-GNDSYVTNSLIDMYA 396
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGN---VNEAFGLCNQMRRMSVTPDLVV 233
K + +AR +FD +V + +I GY +G ++EA + MR + P L+
Sbjct: 397 KCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLT 456
Query: 234 FLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVL 293
F++L+ A + +L L+ +H L+ K G N + + L+ +Y+ C L+ +R VFD +
Sbjct: 457 FVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMK 516
Query: 294 EKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKE 353
K + +W SM GY Q EA+NLF L + RP+E T A ++A L S+ G+E
Sbjct: 517 VKDLVIWNSMFAGYVQQSENEEALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQE 576
Query: 354 IEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGM 413
++ GLE N + +L+ M++KCG A + F+ +D+ W+++I+ YA HG
Sbjct: 577 FHCQLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGE 636
Query: 414 GDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHY 473
G +AL + KM EG++P+ + + +LSACSH+G+V+DGL F+ M FGIEP EHY
Sbjct: 637 GKKALQMLEKMMS-EGIEPNYITFVGVLSACSHAGLVEDGLKQFELML-RFGIEPETEHY 694
Query: 474 LCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNP 533
+C+V LLGRAGR + A + I +MP + A VW LLS C K NVEL E+AA+ + +P
Sbjct: 695 VCMVSLLGRAGRLNKARELIEKMPTKPAAIVWRSLLSGCAKAGNVELAEHAAEMAILSDP 754
Query: 534 GSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHH 593
+G++ +++N++ S GMW EA R M + KEPG S + I+ V +F++ D+SH
Sbjct: 755 KDSGSFTMLSNIYASKGMWTEAKKVRERMKVEGVVKEPGRSWIGINKEVHIFLSKDKSHC 814
Query: 594 LSVDIRKTLKELHIKL 609
+ I + L +L +++
Sbjct: 815 KANQIYEVLDDLLVQI 830
Score = 192 bits (489), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 149/576 (25%), Positives = 273/576 (47%), Gaps = 29/576 (5%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHG-NSFTFPLVLKACANINSI--WDGKRVHSHVL 57
M+ ++G +EE+L + +T N + ++AC+ ++ W ++ S ++
Sbjct: 116 MVSACNHHGIYEESLVVFLEFWRTRKDSPNEYILSSFIQACSGLDGRGRWMVFQLQSFLV 175
Query: 58 KVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEA 117
K GF +D +V T LID Y K + +R V D +P +S V+W ++IS + + +
Sbjct: 176 KSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPE--KSTVTWTTMISGCVKMGRSYVS 233
Query: 118 ILVLKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMS 173
+ + ++ + +V+S CS G +H + + G L + L N ++
Sbjct: 234 LQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYG-LEMDASLMNVLID 292
Query: 174 MYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVV 233
Y K G+V A +F+ + +I+SWTT++ GY EA L M + + PD+
Sbjct: 293 SYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYA 352
Query: 234 FLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVL 293
+++ CA + L +H+ +K+ N+ + N L+ MY KC L AR+VFD
Sbjct: 353 CSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFA 412
Query: 294 EKSVFLWTSMIGGYAQLGYP---SEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSK 350
V L+ +MI GY++LG EA+N+F+ + +RP+ T + L A A L SL
Sbjct: 413 AADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGL 472
Query: 351 GKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAI 410
K+I + GL + ++LI ++S C + ++ VF+ + KDL +W++M GY
Sbjct: 473 SKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQ 532
Query: 411 HGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFF-KSMQSNFGIEPS 469
++ALNLF ++Q + +PD + ++++A + V G F + ++ P
Sbjct: 533 QSENEEALNLFLELQ-LSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLECNPY 591
Query: 470 IEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNL- 528
I + L+D+ + G + A K + W ++S+ H G+ A + L
Sbjct: 592 ITN--ALLDMYAKCGSPEDAHKAF-DSAASRDVVCWNSVISSYANHGE---GKKALQMLE 645
Query: 529 LTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDD 564
++ G NYI + + A + GL++D
Sbjct: 646 KMMSEGIEPNYITFVGVLS-------ACSHAGLVED 674
Score = 187 bits (475), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 114/402 (28%), Positives = 213/402 (52%), Gaps = 14/402 (3%)
Query: 52 VHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRA 111
VH ++ G + D ++ LI++YS+ V +RKV ++MP R ++VSW++++SA +
Sbjct: 66 VHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMPER--NLVSWSTMVSACNHH 123
Query: 112 CLNDEAILVLKEMWVLGL----ELSASTFVSVVSGCSFR---QGISMHCCVYKLGLLNNE 164
+ +E+++V E W E S+F+ SG R + + K G + +
Sbjct: 124 GIYEESLVVFLEFWRTRKDSPNEYILSSFIQACSGLDGRGRWMVFQLQSFLVKSGF-DRD 182
Query: 165 IPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRR 224
+ + ++ Y K G ++ AR +FD + E S V+WTT+I G V +G + L Q+
Sbjct: 183 VYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLME 242
Query: 225 MSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLEL 284
+V PD + ++ C+ + L +H+ +L+ G + L N+L+ Y KCG +
Sbjct: 243 DNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIA 302
Query: 285 ARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAE 344
A ++F+ + K++ WT+++ GY Q EA+ LF + K ++P+ ++ L++CA
Sbjct: 303 AHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCAS 362
Query: 345 LGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAM 404
L +L G ++ Y + L ++ V SLI M++KC + A++VF+ D+ +++AM
Sbjct: 363 LHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAM 422
Query: 405 INGYAIHGMG---DQALNLFYKMQHVEGLKPDAVVYTSILSA 443
I GY+ G +ALN+F M+ ++P + + S+L A
Sbjct: 423 IEGYSRLGTQWELHEALNIFRDMR-FRLIRPSLLTFVSLLRA 463
Score = 69.7 bits (169), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 80/160 (50%), Gaps = 6/160 (3%)
Query: 358 IVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQA 417
I++ GLE + + LI+++S+ G + A++VFE++P+++L WS M++ HG+ +++
Sbjct: 70 IIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGIYEES 129
Query: 418 LNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNF---GIEPSIEHYL 474
L +F + P+ + +S + AC SG+ G +QS G + +
Sbjct: 130 LVVFLEFWRTRKDSPNEYILSSFIQAC--SGLDGRGRWMVFQLQSFLVKSGFDRDVYVGT 187
Query: 475 CLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMK 514
L+D + G D A +P E W ++S C+K
Sbjct: 188 LLIDFYLKDGNIDYARLVFDALP-EKSTVTWTTMISGCVK 226
>sp|Q7Y211|PP285_ARATH Pentatricopeptide repeat-containing protein At3g57430,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H81 PE=2
SV=2
Length = 890
Score = 369 bits (948), Expect = e-101, Method: Compositional matrix adjust.
Identities = 209/634 (32%), Positives = 355/634 (55%), Gaps = 30/634 (4%)
Query: 11 FEETLSTYSSMLQTGVHGNSFTFPLVLKACANI---NSIWDGKRVHSHVLKVGFQQDAFV 67
+E L + ML V +SFT V+ AC+N+ + GK+VH++ L+ G + ++F+
Sbjct: 180 WEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKG-ELNSFI 238
Query: 68 QTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLND---EAILVLKEM 124
L+ MY K SS+ +L R +V+WN+++S+ C N+ EA+ L+EM
Sbjct: 239 INTLVAMYGKLGKLASSKVLLGSFGGR--DLVTWNTVLSS---LCQNEQLLEALEYLREM 293
Query: 125 WVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGK 180
+ G+E T SV+ CS R G +H K G L+ + ++++ MY +
Sbjct: 294 VLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQ 353
Query: 181 VNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMS-VTPDLVVFLNLIL 239
V R +FD + + I W +I GY + EA L M + + + ++
Sbjct: 354 VLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVP 413
Query: 240 GCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFL 299
C + G ++H ++K G + + + N L+ MY++ G +++A R+F + ++ +
Sbjct: 414 ACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVT 473
Query: 300 WTSMIGGYAQLGYPSEAVNLFKRLL-----------KTSVRPNEATLATTLSACAELGSL 348
W +MI GY + +A+ L ++ + S++PN TL T L +CA L +L
Sbjct: 474 WNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSAL 533
Query: 349 SKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGY 408
+KGKEI Y + N L ++ V ++L+ M++KCG + +++VF+++P K++ W+ +I Y
Sbjct: 534 AKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAY 593
Query: 409 AIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEP 468
+HG G +A++L +M V+G+KP+ V + S+ +ACSHSGMVD+GL F M+ ++G+EP
Sbjct: 594 GMHGNGQEAIDLL-RMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEP 652
Query: 469 SIEHYLCLVDLLGRAGRFDLALKTIHEMPVEV-QAQVWAPLLSACMKHHNVELGEYAAKN 527
S +HY C+VDLLGRAGR A + ++ MP + +A W+ LL A H+N+E+GE AA+N
Sbjct: 653 SSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQN 712
Query: 528 LLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVA 587
L+ L P +Y+L+AN+++SAG+W +A R M ++ + KEPG S +E V FVA
Sbjct: 713 LIQLEPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFVA 772
Query: 588 GDRSHHLSVDIRKTLKELHIKLLEAGYIAEADIV 621
GD SH S + L+ L ++ + GY+ + V
Sbjct: 773 GDSSHPQSEKLSGYLETLWERMRKEGYVPDTSCV 806
Score = 241 bits (616), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 153/536 (28%), Positives = 278/536 (51%), Gaps = 24/536 (4%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
++R+ + E + TY M+ G+ +++ FP +LKA A++ + GK++H+HV K G
Sbjct: 68 LLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFG 127
Query: 61 FQQDAF-VQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAIL 119
+ D+ V L+++Y KC DF + KV D + R+ VSWNS+IS+ + A+
Sbjct: 128 YGVDSVTVANTLVNLYRKCGDFGAVYKVFDR--ISERNQVSWNSLISSLCSFEKWEMALE 185
Query: 120 VLKEMWVLGLELSASTFVSVVSGCS---FRQGISMHCCVYKLGLLNNEIP--LANSVMSM 174
+ M +E S+ T VSVV+ CS +G+ M V+ GL E+ + N++++M
Sbjct: 186 AFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELNSFIINTLVAM 245
Query: 175 YAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVF 234
Y K GK+ ++ + G +V+W T++ + EA +M V PD
Sbjct: 246 YGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTI 305
Query: 235 LNLILGCAQVGNLFLALSMHSLLLKSGYNNEDP-LDNLLVSMYTKCGDLELARRVFDAVL 293
+++ C+ + L +H+ LK+G +E+ + + LV MY C + RRVFD +
Sbjct: 306 SSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMF 365
Query: 294 EKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTS-VRPNEATLATTLSACAELGSLSKGK 352
++ + LW +MI GY+Q + EA+ LF + +++ + N T+A + AC G+ S+ +
Sbjct: 366 DRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKE 425
Query: 353 EIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHG 412
I ++V GL+ +R VQ +L+ M+S+ G+I+ A +F ++ D+DL W+ MI GY
Sbjct: 426 AIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSE 485
Query: 413 MGDQALNLFYKMQHVE----------GLKPDAVVYTSILSACSHSGMVDDGLSFFK-SMQ 461
+ AL L +KMQ++E LKP+++ +IL +C+ + G +++
Sbjct: 486 HHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIK 545
Query: 462 SNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHN 517
+N + ++ LVD+ + G ++ K ++P + W ++ A H N
Sbjct: 546 NNLATDVAVGS--ALVDMYAKCGCLQMSRKVFDQIP-QKNVITWNVIIMAYGMHGN 598
Score = 151 bits (382), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 107/420 (25%), Positives = 199/420 (47%), Gaps = 32/420 (7%)
Query: 96 RSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCSFRQ----GISM 151
RS W ++ + R+ L EA+L +M VLG++ F +++ + Q G +
Sbjct: 60 RSPEWWIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQI 119
Query: 152 HCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGN 211
H VYK G + + +AN+++++Y K G +FD I E + VSW ++I +
Sbjct: 120 HAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEK 179
Query: 212 VNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVG---NLFLALSMHSLLLKSGYNNEDPL 268
A M +V P ++++ C+ + L + +H+ L+ G N +
Sbjct: 180 WEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELNSFII 239
Query: 269 DNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSV 328
N LV+MY K G L ++ + + + + W +++ Q EA+ + ++ V
Sbjct: 240 -NTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGV 298
Query: 329 RPNEATLATTLSACAELGSLSKGKEIEEYIVLNG-LESNRQVQTSLIHMFSKCGRINKAK 387
P+E T+++ L AC+ L L GKE+ Y + NG L+ N V ++L+ M+ C ++ +
Sbjct: 299 EPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGR 358
Query: 388 EVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHS 447
VF+ + D+ + +W+AMI GY+ + +AL LF M+ GL ++ ++ AC S
Sbjct: 359 RVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRS 418
Query: 448 G-----------MVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEM 496
G +V GL + +Q+ L+D+ R G+ D+A++ +M
Sbjct: 419 GAFSRKEAIHGFVVKRGLDRDRFVQNT------------LMDMYSRLGKIDIAMRIFGKM 466
>sp|P0C898|PP232_ARATH Putative pentatricopeptide repeat-containing protein At3g15130
OS=Arabidopsis thaliana GN=PCMP-H86 PE=3 SV=1
Length = 689
Score = 367 bits (943), Expect = e-100, Method: Compositional matrix adjust.
Identities = 207/594 (34%), Positives = 339/594 (57%), Gaps = 23/594 (3%)
Query: 36 VLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRL 95
+L+ C G +VH ++LK G + LIDMY KC + + + KV D MP R
Sbjct: 12 ILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMPER- 70
Query: 96 RSVVSWNSIISAHSRACLNDE---AILVLKEMWVLGLELSASTFVSVVSGC----SFRQG 148
+VVSW++++S H LN + ++ + EM G+ + TF + + C + +G
Sbjct: 71 -NVVSWSALMSGH---VLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKG 126
Query: 149 ISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVN 208
+ +H K+G + + NS++ MY+K G++NEA +F I + S++SW +I G+V+
Sbjct: 127 LQIHGFCLKIGF-EMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVH 185
Query: 209 VGNVNEAFGLCNQMRRMSVT--PDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYN--N 264
G ++A M+ ++ PD +L+ C+ G ++ +H L++SG++ +
Sbjct: 186 AGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPS 245
Query: 265 EDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLL 324
+ LV +Y KCG L AR+ FD + EK++ W+S+I GYAQ G EA+ LFKRL
Sbjct: 246 SATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQ 305
Query: 325 KTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVL--NGLESNRQVQTSLIHMFSKCGR 382
+ + + + L++ + A+ L +GK+++ V +GLE++ V S++ M+ KCG
Sbjct: 306 ELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETS--VLNSVVDMYLKCGL 363
Query: 383 INKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILS 442
+++A++ F + KD+ W+ +I GY HG+G +++ +FY+M ++PD V Y ++LS
Sbjct: 364 VDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLR-HNIEPDEVCYLAVLS 422
Query: 443 ACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQA 502
ACSHSGM+ +G F + GI+P +EHY C+VDLLGRAGR A I MP++
Sbjct: 423 ACSHSGMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIKPNV 482
Query: 503 QVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLM 562
+W LLS C H ++ELG+ K LL ++ + NY++M+NL+ AG W E AR L
Sbjct: 483 GIWQTLLSLCRVHGDIELGKEVGKILLRIDAKNPANYVMMSNLYGQAGYWNEQGNARELG 542
Query: 563 DDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKELHIKLLEA-GYI 615
+ + L KE G S VEI+ V F +G+ SH L+ I++TLKE +L E GY+
Sbjct: 543 NIKGLKKEAGMSWVEIEREVHFFRSGEDSHPLTPVIQETLKEAERRLREELGYV 596
Score = 185 bits (470), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 115/414 (27%), Positives = 210/414 (50%), Gaps = 11/414 (2%)
Query: 8 NGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFV 67
NG + +LS +S M + G++ N FTF LKAC +N++ G ++H LK+GF+ V
Sbjct: 85 NGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEV 144
Query: 68 QTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVL 127
L+DMYSKC + KV + RS++SWN++I+ A +A+ M
Sbjct: 145 GNSLVDMYSKCGRINEAEKVFRR--IVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEA 202
Query: 128 GLELSASTF--VSVVSGCS----FRQGISMHCCVYKLGL-LNNEIPLANSVMSMYAKFGK 180
++ F S++ CS G +H + + G + + S++ +Y K G
Sbjct: 203 NIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGY 262
Query: 181 VNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILG 240
+ AR FD+I E +++SW+++I GY G EA GL +++ ++ D ++I
Sbjct: 263 LFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGV 322
Query: 241 CAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLW 300
A L M +L +K E + N +V MY KCG ++ A + F + K V W
Sbjct: 323 FADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISW 382
Query: 301 TSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEI-EEYIV 359
T +I GY + G ++V +F +L+ ++ P+E LSAC+ G + +G+E+ + +
Sbjct: 383 TVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLE 442
Query: 360 LNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDK-DLAVWSAMINGYAIHG 412
+G++ + ++ + + GR+ +AK + + +P K ++ +W +++ +HG
Sbjct: 443 THGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIKPNVGIWQTLLSLCRVHG 496
Score = 68.6 bits (166), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 83/168 (49%), Gaps = 3/168 (1%)
Query: 330 PNE-ATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKE 388
PN+ L + L C G +G ++ Y++ +G N LI M+ KC A +
Sbjct: 3 PNQRQNLVSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYK 62
Query: 389 VFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSG 448
VF+ +P++++ WSA+++G+ ++G +L+LF +M +G+ P+ +++ L AC
Sbjct: 63 VFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGR-QGIYPNEFTFSTNLKACGLLN 121
Query: 449 MVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEM 496
++ GL G E +E LVD+ + GR + A K +
Sbjct: 122 ALEKGLQ-IHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRI 168
Score = 60.1 bits (144), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/208 (19%), Positives = 95/208 (45%), Gaps = 7/208 (3%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+I G F E + + + + +SF ++ A+ + GK++ + +K+
Sbjct: 284 LILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLP 343
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+ V ++DMY KC + K EM +L+ V+SW +I+ + + L +++ +
Sbjct: 344 SGLETSVLNSVVDMYLKCGLVDEAEKCFAEM--QLKDVISWTVVITGYGKHGLGKKSVRI 401
Query: 121 LKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
EM +E +++V+S CS ++G + + + + + V+ +
Sbjct: 402 FYEMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVEHYACVVDLLG 461
Query: 177 KFGKVNEARSIFDEIG-ETSIVSWTTII 203
+ G++ EA+ + D + + ++ W T++
Sbjct: 462 RAGRLKEAKHLIDTMPIKPNVGIWQTLL 489
>sp|O82380|PP175_ARATH Pentatricopeptide repeat-containing protein At2g29760,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H33 PE=2
SV=1
Length = 738
Score = 367 bits (942), Expect = e-100, Method: Compositional matrix adjust.
Identities = 213/613 (34%), Positives = 333/613 (54%), Gaps = 55/613 (8%)
Query: 50 KRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVS---SRKVLDEMPVRLRSVVSWNSIIS 106
K+ H H+++ G D + + L M + S F S +RKV DE+P + +WN++I
Sbjct: 47 KQTHGHMIRTGTFSDPYSASKLFAM-AALSSFASLEYARKVFDEIPKP--NSFAWNTLIR 103
Query: 107 AHSRACLNDEAILVLKEM----------WVLGLELSASTFVSVVSGCSFRQGISMHCCVY 156
A++ +I +M + + A+ VS S G S+H
Sbjct: 104 AYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVS-----SLSLGQSLHGMAV 158
Query: 157 KLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAF 216
K + +++ +ANS++ Y G ++ A +F I E +VSW ++I G+V G+ ++A
Sbjct: 159 K-SAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKAL 217
Query: 217 GLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMY 276
L +M V V + ++ CA++ NL + S + ++ N L N ++ MY
Sbjct: 218 ELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMY 277
Query: 277 TKCGDLELARRVFDAVLEKSVFLWTSMIGGYA---------------------------- 308
TKCG +E A+R+FDA+ EK WT+M+ GYA
Sbjct: 278 TKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALIS 337
Query: 309 ---QLGYPSEAVNLFKRL-LKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLE 364
Q G P+EA+ +F L L+ +++ N+ TL +TLSACA++G+L G+ I YI +G+
Sbjct: 338 AYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIR 397
Query: 365 SNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKM 424
N V ++LIHM+SKCG + K++EVF V +D+ VWSAMI G A+HG G++A+++FYKM
Sbjct: 398 MNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKM 457
Query: 425 QHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAG 484
Q +KP+ V +T++ ACSH+G+VD+ S F M+SN+GI P +HY C+VD+LGR+G
Sbjct: 458 QEA-NVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSG 516
Query: 485 RFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMAN 544
+ A+K I MP+ VW LL AC H N+ L E A LL L P + G ++L++N
Sbjct: 517 YLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRNDGAHVLLSN 576
Query: 545 LFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKE 604
++ G W+ + R M L KEPG S +EIDG + F++GD +H +S + L E
Sbjct: 577 IYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHPMSEKVYGKLHE 636
Query: 605 LHIKLLEAGYIAE 617
+ KL GY E
Sbjct: 637 VMEKLKSNGYEPE 649
Score = 192 bits (487), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 124/427 (29%), Positives = 213/427 (49%), Gaps = 39/427 (9%)
Query: 23 QTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFV 82
++ + N +TFP ++KA A ++S+ G+ +H +K D FV LI Y C D
Sbjct: 124 ESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLD 183
Query: 83 SSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSG 142
S+ KV ++ + VVSWNS+I+ + D+A+ + K+M ++ S T V V+S
Sbjct: 184 SACKVF--TTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSA 241
Query: 143 CSFRQGISM--HCCVY-KLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSW 199
C+ + + C Y + +N + LAN+++ MY K G + +A+ +FD + E V+W
Sbjct: 242 CAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTW 301
Query: 200 TTIIGGYVNVGNVNEAFGLCNQMRRMSVT--------------PD--LVVFLNLIL---- 239
TT++ GY + A + N M + + P+ L+VF L L
Sbjct: 302 TTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNM 361
Query: 240 ------------GCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARR 287
CAQVG L L +HS + K G + + L+ MY+KCGDLE +R
Sbjct: 362 KLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSRE 421
Query: 288 VFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGS 347
VF++V ++ VF+W++MIGG A G +EAV++F ++ + +V+PN T AC+ G
Sbjct: 422 VFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGL 481
Query: 348 LSKGKEIEEYIVLN-GLESNRQVQTSLIHMFSKCGRINKAKEVFERVP-DKDLAVWSAMI 405
+ + + + + N G+ + ++ + + G + KA + E +P +VW A++
Sbjct: 482 VDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALL 541
Query: 406 NGYAIHG 412
IH
Sbjct: 542 GACKIHA 548
Score = 116 bits (290), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 99/405 (24%), Positives = 189/405 (46%), Gaps = 48/405 (11%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI GS ++ L + M V + T VL ACA I ++ G++V S++ +
Sbjct: 203 MINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENR 262
Query: 61 FQQDAFVQTGLIDMYSKC-------------------------------SDFVSSRKVLD 89
+ + ++DMY+KC D+ ++R+VL+
Sbjct: 263 VNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLN 322
Query: 90 EMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVL-GLELSASTFVSVVSGC----S 144
MP + +V+WN++ISA+ + +EA++V E+ + ++L+ T VS +S C +
Sbjct: 323 SMP--QKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGA 380
Query: 145 FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIG 204
G +H + K G+ N + ++++ MY+K G + ++R +F+ + + + W+ +IG
Sbjct: 381 LELGRWIHSYIKKHGIRMN-FHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIG 439
Query: 205 GYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSM-HSLLLKSGYN 263
G G NEA + +M+ +V P+ V F N+ C+ G + A S+ H + G
Sbjct: 440 GLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIV 499
Query: 264 NEDPLDNLLVSMYTKCGDLELARRVFDAV-LEKSVFLWTSMIGG---YAQLGYPSEAVNL 319
E+ +V + + G LE A + +A+ + S +W +++G +A L A
Sbjct: 500 PEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACT- 558
Query: 320 FKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLE 364
RLL+ R N+ + A+LG E+ +++ + GL+
Sbjct: 559 --RLLELEPR-NDGAHVLLSNIYAKLGKWENVSELRKHMRVTGLK 600
>sp|Q9LUS3|PP237_ARATH Pentatricopeptide repeat-containing protein At3g16610
OS=Arabidopsis thaliana GN=PCMP-E91 PE=2 SV=1
Length = 654
Score = 367 bits (941), Expect = e-100, Method: Compositional matrix adjust.
Identities = 215/589 (36%), Positives = 330/589 (56%), Gaps = 19/589 (3%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MIR +N E+ L Y ML +GV +T+P VLKACA + +I DGK +HSHV
Sbjct: 74 MIRAYASNDFAEKALDLYYKMLNSGVRPTKYTYPFVLKACAGLRAIDDGKLIHSHVNCSD 133
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHS-RACLNDEAIL 119
F D +V T L+D Y+KC + + KV DEMP R +V+WN++IS S CL D L
Sbjct: 134 FATDMYVCTALVDFYAKCGELEMAIKVFDEMPK--RDMVAWNAMISGFSLHCCLTDVIGL 191
Query: 120 VLKEMWVLGLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMY 175
L + GL + ST V + + R+G ++H ++G +N++ + ++ +Y
Sbjct: 192 FLDMRRIDGLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMG-FSNDLVVKTGILDVY 250
Query: 176 AKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQM----RRMSVTPDL 231
AK + AR +FD + + V+W+ +IGGYV + EA + QM VTP
Sbjct: 251 AKSKCIIYARRVFDLDFKKNEVTWSAMIGGYVENEMIKEAGEVFFQMLVNDNVAMVTP-- 308
Query: 232 VVFLNLIL-GCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFD 290
V + LIL GCA+ G+L +H +K+G+ + + N ++S Y K G L A R F
Sbjct: 309 -VAIGLILMGCARFGDLSGGRCVHCYAVKAGFILDLTVQNTIISFYAKYGSLCDAFRQFS 367
Query: 291 AVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSK 350
+ K V + S+I G P E+ LF + + +RP+ TL L+AC+ L +L
Sbjct: 368 EIGLKDVISYNSLITGCVVNCRPEESFRLFHEMRTSGIRPDITTLLGVLTACSHLAALGH 427
Query: 351 GKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAI 410
G Y V++G N + +L+ M++KCG+++ AK VF+ + +D+ W+ M+ G+ I
Sbjct: 428 GSSCHGYCVVHGYAVNTSICNALMDMYTKCGKLDVAKRVFDTMHKRDIVSWNTMLFGFGI 487
Query: 411 HGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSM-QSNFGIEPS 469
HG+G +AL+LF MQ G+ PD V +ILSACSHSG+VD+G F SM + +F + P
Sbjct: 488 HGLGKEALSLFNSMQET-GVNPDEVTLLAILSACSHSGLVDEGKQLFNSMSRGDFNVIPR 546
Query: 470 IEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLL 529
I+HY C+ DLL RAG D A +++MP E +V LLSAC + N ELG +K +
Sbjct: 547 IDHYNCMTDLLARAGYLDEAYDFVNKMPFEPDIRVLGTLLSACWTYKNAELGNEVSKKMQ 606
Query: 530 TLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEI 578
+L +T + +L++N +++A W++AA R + R L K PG+S V++
Sbjct: 607 SLGE-TTESLVLLSNTYSAAERWEDAARIRMIQKKRGLLKTPGYSWVDV 654
Score = 161 bits (407), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 116/475 (24%), Positives = 230/475 (48%), Gaps = 17/475 (3%)
Query: 33 FPLVLKACANINSIWDGKRVHSHVLKVGFQ-QDAFVQTGLIDMYSKCSDFVSSRKVLDEM 91
F +L+ C ++ G+ +H H+LK + V L +Y+ C++ +R V DE+
Sbjct: 2 FLSLLETCIRSRNLVLGQVIHQHLLKRSLTLSSSTVLVNLTRLYASCNEVELARHVFDEI 61
Query: 92 PVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCSFRQGIS- 150
P + ++W+ +I A++ ++A+ + +M G+ + T+ V+ C+ + I
Sbjct: 62 PHPRINPIAWDLMIRAYASNDFAEKALDLYYKMLNSGVRPTKYTYPFVLKACAGLRAIDD 121
Query: 151 ---MHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYV 207
+H V ++ + +++ YAK G++ A +FDE+ + +V+W +I G+
Sbjct: 122 GKLIHSHV-NCSDFATDMYVCTALVDFYAKCGELEMAIKVFDEMPKRDMVAWNAMISGFS 180
Query: 208 NVGNVNEAFGLCNQMRRMS-VTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNED 266
+ + GL MRR+ ++P+L + + + G L ++H + G++N+
Sbjct: 181 LHCCLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGFSNDL 240
Query: 267 PLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKT 326
+ ++ +Y K + ARRVFD +K+ W++MIGGY + EA +F ++L
Sbjct: 241 VVKTGILDVYAKSKCIIYARRVFDLDFKKNEVTWSAMIGGYVENEMIKEAGEVFFQMLVN 300
Query: 327 S----VRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGR 382
V P + L CA G LS G+ + Y V G + VQ ++I ++K G
Sbjct: 301 DNVAMVTP--VAIGLILMGCARFGDLSGGRCVHCYAVKAGFILDLTVQNTIISFYAKYGS 358
Query: 383 INKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILS 442
+ A F + KD+ ++++I G ++ +++ LF++M+ G++PD +L+
Sbjct: 359 LCDAFRQFSEIGLKDVISYNSLITGCVVNCRPEESFRLFHEMR-TSGIRPDITTLLGVLT 417
Query: 443 ACSHSGMVDDGLSFFK-SMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEM 496
ACSH + G S + + + SI + L+D+ + G+ D+A + M
Sbjct: 418 ACSHLAALGHGSSCHGYCVVHGYAVNTSICN--ALMDMYTKCGKLDVAKRVFDTM 470
Score = 129 bits (323), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 69/225 (30%), Positives = 121/225 (53%), Gaps = 5/225 (2%)
Query: 233 VFLNLILGCAQVGNLFLALSMHSLLLKSGY--NNEDPLDNLLVSMYTKCGDLELARRVFD 290
+FL+L+ C + NL L +H LLK ++ L NL +Y C ++ELAR VFD
Sbjct: 1 MFLSLLETCIRSRNLVLGQVIHQHLLKRSLTLSSSTVLVNL-TRLYASCNEVELARHVFD 59
Query: 291 AVLEKSV--FLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSL 348
+ + W MI YA + +A++L+ ++L + VRP + T L ACA L ++
Sbjct: 60 EIPHPRINPIAWDLMIRAYASNDFAEKALDLYYKMLNSGVRPTKYTYPFVLKACAGLRAI 119
Query: 349 SKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGY 408
GK I ++ + ++ V T+L+ ++KCG + A +VF+ +P +D+ W+AMI+G+
Sbjct: 120 DDGKLIHSHVNCSDFATDMYVCTALVDFYAKCGELEMAIKVFDEMPKRDMVAWNAMISGF 179
Query: 409 AIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDG 453
++H + LF M+ ++GL P+ + A +G + +G
Sbjct: 180 SLHCCLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALREG 224
>sp|Q9ZQ74|PP146_ARATH Pentatricopeptide repeat-containing protein At2g03380,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E47 PE=3
SV=1
Length = 689
Score = 366 bits (939), Expect = e-100, Method: Compositional matrix adjust.
Identities = 209/583 (35%), Positives = 321/583 (55%), Gaps = 12/583 (2%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
M+R N E + Y +++ G + F LKAC + + +GK++H ++KV
Sbjct: 113 MLRCYCLNKESVEVVKLYDLLMKHGFRYDDIVFSKALKACTELQDLDNGKKIHCQLVKVP 172
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
D V TGL+DMY+KC + S+ KV ++ + LR+VV W S+I+ + + L +E +++
Sbjct: 173 -SFDNVVLTGLLDMYAKCGEIKSAHKVFND--ITLRNVVCWTSMIAGYVKNDLCEEGLVL 229
Query: 121 LKEMW---VLGLELSASTFVSVVSGCS-FRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
M VLG E + T + + S QG H C+ K G+ + L S++ MY
Sbjct: 230 FNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSC-LVTSLLDMYV 288
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K G ++ AR +F+E +V WT +I GY + G+VNEA L +M+ + + P+ V +
Sbjct: 289 KCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTIAS 348
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
++ GC + NL L S+H L +K G + + + N LV MY KC A+ VF+ EK
Sbjct: 349 VLSGCGLIENLELGRSVHGLSIKVGIWDTN-VANALVHMYAKCYQNRDAKYVFEMESEKD 407
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEE 356
+ W S+I G++Q G EA+ LF R+ SV PN T+A+ SACA LGSL+ G +
Sbjct: 408 IVAWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLGSLAVGSSLHA 467
Query: 357 YIVLNGL--ESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMG 414
Y V G S+ V T+L+ ++KCG A+ +F+ + +K+ WSAMI GY G
Sbjct: 468 YSVKLGFLASSSVHVGTALLDFYAKCGDPQSARLIFDTIEEKNTITWSAMIGGYGKQGDT 527
Query: 415 DQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYL 474
+L LF +M + KP+ +TSILSAC H+GMV++G +F SM ++ PS +HY
Sbjct: 528 IGSLELFEEMLKKQQ-KPNESTFTSILSACGHTGMVNEGKKYFSSMYKDYNFTPSTKHYT 586
Query: 475 CLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPG 534
C+VD+L RAG + AL I +MP++ + + L C H +LGE K +L L+P
Sbjct: 587 CMVDMLARAGELEQALDIIEKMPIQPDVRCFGAFLHGCGMHSRFDLGEIVIKKMLDLHPD 646
Query: 535 STGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVE 577
Y+L++NL+ S G W +A R LM R L+K G S +E
Sbjct: 647 DASYYVLVSNLYASDGRWNQAKEVRNLMKQRGLSKIAGHSTME 689
Score = 163 bits (413), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 97/284 (34%), Positives = 154/284 (54%), Gaps = 2/284 (0%)
Query: 161 LNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCN 220
L +I +A ++S+Y FG +AR +FD+I E W ++ Y E L +
Sbjct: 72 LMGDISIATKLVSLYGFFGYTKDARLVFDQIPEPDFYLWKVMLRCYCLNKESVEVVKLYD 131
Query: 221 QMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCG 280
+ + D +VF + C ++ +L +H L+K + L LL MY KCG
Sbjct: 132 LLMKHGFRYDDIVFSKALKACTELQDLDNGKKIHCQLVKVPSFDNVVLTGLL-DMYAKCG 190
Query: 281 DLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLS 340
+++ A +VF+ + ++V WTSMI GY + E + LF R+ + +V NE T T +
Sbjct: 191 EIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCEEGLVLFNRMRENNVLGNEYTYGTLIM 250
Query: 341 ACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAV 400
AC +L +L +GK +V +G+E + + TSL+ M+ KCG I+ A+ VF DL +
Sbjct: 251 ACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVM 310
Query: 401 WSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSAC 444
W+AMI GY +G ++AL+LF KM+ VE +KP+ V S+LS C
Sbjct: 311 WTAMIVGYTHNGSVNEALSLFQKMKGVE-IKPNCVTIASVLSGC 353
Score = 96.3 bits (238), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 71/256 (27%), Positives = 119/256 (46%), Gaps = 4/256 (1%)
Query: 254 HSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYP 313
H +L +G + + LVS+Y G + AR VFD + E +LW M+ Y
Sbjct: 64 HGVLTGNGLMGDISIATKLVSLYGFFGYTKDARLVFDQIPEPDFYLWKVMLRCYCLNKES 123
Query: 314 SEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSL 373
E V L+ L+K R ++ + L AC EL L GK+I +V + V T L
Sbjct: 124 VEVVKLYDLLMKHGFRYDDIVFSKALKACTELQDLDNGKKIHCQLV-KVPSFDNVVLTGL 182
Query: 374 IHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPD 433
+ M++KCG I A +VF + +++ W++MI GY + + ++ L LF +M+ L +
Sbjct: 183 LDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCEEGLVLFNRMRENNVLG-N 241
Query: 434 AVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTI 493
Y +++ AC+ + G +F GIE S L+D+ + G A +
Sbjct: 242 EYTYGTLIMACTKLSALHQG-KWFHGCLVKSGIELSSCLVTSLLDMYVKCGDISNARRVF 300
Query: 494 HEMPVEVQAQVWAPLL 509
+E V +W ++
Sbjct: 301 NEHS-HVDLVMWTAMI 315
>sp|Q9M9E2|PPR45_ARATH Pentatricopeptide repeat-containing protein At1g15510,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H73 PE=2
SV=1
Length = 866
Score = 363 bits (932), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 213/613 (34%), Positives = 331/613 (53%), Gaps = 12/613 (1%)
Query: 6 TNNGSFEETLSTYSSMLQTG-VHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQD 64
G F+E + Y ML G V + +TFP VL+ C I + GK VH HV++ G++ D
Sbjct: 171 AKQGYFDEAMCLYHRMLWVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELD 230
Query: 65 AFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEM 124
V LI MY KC D S+R + D MP R ++SWN++IS + + E + + M
Sbjct: 231 IDVVNALITMYVKCGDVKSARLLFDRMP--RRDIISWNAMISGYFENGMCHEGLELFFAM 288
Query: 125 WVLGLELSASTFVSVVSGCSF----RQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGK 180
L ++ T SV+S C R G +H V G +I + NS+ MY G
Sbjct: 289 RGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAV-DISVCNSLTQMYLNAGS 347
Query: 181 VNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILG 240
EA +F + IVSWTT+I GY ++A M + SV PD + ++
Sbjct: 348 WREAEKLFSRMERKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSA 407
Query: 241 CAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLW 300
CA +G+L + +H L +K+ + + N L++MY+KC ++ A +F + K+V W
Sbjct: 408 CATLGDLDTGVELHKLAIKARLISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISW 467
Query: 301 TSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVL 360
TS+I G EA+ +F R +K +++PN TL L+ACA +G+L GKEI +++
Sbjct: 468 TSIIAGLRLNNRCFEAL-IFLRQMKMTLQPNAITLTAALAACARIGALMCGKEIHAHVLR 526
Query: 361 NGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNL 420
G+ + + +L+ M+ +CGR+N A F KD+ W+ ++ GY+ G G + L
Sbjct: 527 TGVGLDDFLPNALLDMYVRCGRMNTAWSQFNS-QKKDVTSWNILLTGYSERGQGSMVVEL 585
Query: 421 FYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLL 480
F +M ++PD + + S+L CS S MV GL +F M+ ++G+ P+++HY C+VDLL
Sbjct: 586 FDRMVKSR-VRPDEITFISLLCGCSKSQMVRQGLMYFSKME-DYGVTPNLKHYACVVDLL 643
Query: 481 GRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYI 540
GRAG A K I +MPV VW LL+AC HH ++LGE +A+++ L+ S G YI
Sbjct: 644 GRAGELQEAHKFIQKMPVTPDPAVWGALLNACRIHHKIDLGELSAQHIFELDKKSVGYYI 703
Query: 541 LMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRK 600
L+ NL+ G W+E A R +M + LT + G S VE+ G V F++ D+ H + +I
Sbjct: 704 LLCNLYADCGKWREVAKVRRMMKENGLTVDAGCSWVEVKGKVHAFLSDDKYHPQTKEINT 763
Query: 601 TLKELHIKLLEAG 613
L+ + K+ E G
Sbjct: 764 VLEGFYEKMSEVG 776
Score = 201 bits (510), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 142/510 (27%), Positives = 256/510 (50%), Gaps = 15/510 (2%)
Query: 8 NGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFV 67
NG EE + +SM + V + F +++ C + +G +V+S L +
Sbjct: 72 NGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMSSLGVEL 131
Query: 68 QTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEM-WV 126
+ M+ + + V + V +M R ++ SWN ++ +++ DEA+ + M WV
Sbjct: 132 GNAFLAMFVRFGNLVDAWYVFGKMSER--NLFSWNVLVGGYAKQGYFDEAMCLYHRMLWV 189
Query: 127 LGLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVN 182
G++ TF V+ C +G +H V + G +I + N++++MY K G V
Sbjct: 190 GGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGY-ELDIDVVNALITMYVKCGDVK 248
Query: 183 EARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCA 242
AR +FD + I+SW +I GY G +E L MR +SV PDL+ ++I C
Sbjct: 249 SARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACE 308
Query: 243 QVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTS 302
+G+ L +H+ ++ +G+ + + N L MY G A ++F + K + WT+
Sbjct: 309 LLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTT 368
Query: 303 MIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNG 362
MI GY P +A++ ++ + + SV+P+E T+A LSACA LG L G E+ + +
Sbjct: 369 MISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKAR 428
Query: 363 LESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFY 422
L S V +LI+M+SKC I+KA ++F +P K++ W+++I G ++ +AL
Sbjct: 429 LISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFLR 488
Query: 423 KMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKS-MQSNFGIEPSIEHYLCLVDLLG 481
+M+ L+P+A+ T+ L+AC+ G + G +++ G++ + + L+D+
Sbjct: 489 QMKMT--LQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPN--ALLDMYV 544
Query: 482 RAGRFDLALKTIHEMPVEVQAQVWAPLLSA 511
R GR + A + +V + W LL+
Sbjct: 545 RCGRMNTAWSQFNSQKKDVTS--WNILLTG 572
Score = 58.9 bits (141), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 104/231 (45%), Gaps = 16/231 (6%)
Query: 311 GYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLES-NRQV 369
G EA+ L + + V +E + C + +G ++ I L+ + S ++
Sbjct: 73 GKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYS-IALSSMSSLGVEL 131
Query: 370 QTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEG 429
+ + MF + G + A VF ++ +++L W+ ++ GYA G D+A+ L+++M V G
Sbjct: 132 GNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGG 191
Query: 430 LKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSN---FGIEPSIEHYLCLVDLLGRAGRF 486
+KPD + +L C G+ D L+ K + + +G E I+ L+ + + G
Sbjct: 192 VKPDVYTFPCVLRTC--GGIPD--LARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDV 247
Query: 487 DLALKTIHEMPVEVQAQVWAPLLSAC----MKHHNVELGEYAAKNLLTLNP 533
A MP W ++S M H +EL + A L+++P
Sbjct: 248 KSARLLFDRMP-RRDIISWNAMISGYFENGMCHEGLEL--FFAMRGLSVDP 295
>sp|Q9LN01|PPR21_ARATH Pentatricopeptide repeat-containing protein At1g08070
OS=Arabidopsis thaliana GN=PCMP-H12 PE=2 SV=1
Length = 741
Score = 360 bits (924), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 205/629 (32%), Positives = 344/629 (54%), Gaps = 53/629 (8%)
Query: 36 VLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDF------VSSRKVLD 89
+L C + S+ + +H+ ++K+G + + LI+ F +S K +
Sbjct: 39 LLHNCKTLQSL---RIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQ 95
Query: 90 EMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCS----F 145
E +++ WN++ H+ + A+ + M LGL ++ TF V+ C+ F
Sbjct: 96 E-----PNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAF 150
Query: 146 RQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEA--------------------- 184
++G +H V KLG + ++ + S++SMY + G++ +A
Sbjct: 151 KEGQQIHGHVLKLGC-DLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKG 209
Query: 185 ----------RSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVF 234
+ +FDEI +VSW +I GY GN EA L M + +V PD
Sbjct: 210 YASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTM 269
Query: 235 LNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLE 294
+ ++ CAQ G++ L +H + G+ + + N L+ +Y+KCG+LE A +F+ +
Sbjct: 270 VTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPY 329
Query: 295 KSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEI 354
K V W ++IGGY + EA+ LF+ +L++ PN+ T+ + L ACA LG++ G+ I
Sbjct: 330 KDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWI 389
Query: 355 EEYI--VLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHG 412
YI L G+ + ++TSLI M++KCG I A +VF + K L+ W+AMI G+A+HG
Sbjct: 390 HVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHG 449
Query: 413 MGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEH 472
D + +LF +M+ + G++PD + + +LSACSHSGM+D G F++M ++ + P +EH
Sbjct: 450 RADASFDLFSRMRKI-GIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEH 508
Query: 473 YLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLN 532
Y C++DLLG +G F A + I+ M +E +W LL AC H NVELGE A+NL+ +
Sbjct: 509 YGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIE 568
Query: 533 PGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSH 592
P + G+Y+L++N++ SAG W E A R L++D+ + K PG S +EID V F+ GD+ H
Sbjct: 569 PENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFH 628
Query: 593 HLSVDIRKTLKELHIKLLEAGYIAEADIV 621
+ +I L+E+ + L +AG++ + V
Sbjct: 629 PRNREIYGMLEEMEVLLEKAGFVPDTSEV 657
Score = 215 bits (547), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 154/530 (29%), Positives = 253/530 (47%), Gaps = 78/530 (14%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
M R + L Y M+ G+ NS+TFP VLK+CA + +G+++H HVLK+G
Sbjct: 105 MFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLG 164
Query: 61 FQQDAFVQTGLIDMY---------------SKCSDFVS----------------SRKVLD 89
D +V T LI MY S D VS ++K+ D
Sbjct: 165 CDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFD 224
Query: 90 EMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGC----SF 145
E+PV + VVSWN++IS ++ EA+ + K+M + ST V+VVS C S
Sbjct: 225 EIPV--KDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSI 282
Query: 146 RQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGG 205
G +H + G +N + + N+++ +Y+K G++ A +F+ + ++SW T+IGG
Sbjct: 283 ELGRQVHLWIDDHGFGSN-LKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGG 341
Query: 206 YVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLK--SGYN 263
Y ++ EA L +M R TP+ V L+++ CA +G + + +H + K G
Sbjct: 342 YTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVT 401
Query: 264 NEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRL 323
N L L+ MY KCGD+E A +VF+++L KS+ W +MI G+A G + +LF R+
Sbjct: 402 NASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRM 461
Query: 324 LKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRI 383
K ++P++ T LSAC+ G L G+ I + + ++ L H
Sbjct: 462 RKIGIQPDDITFVGLLSACSHSGMLDLGRHI-----FRTMTQDYKMTPKLEH-------- 508
Query: 384 NKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSA 443
+ MI+ G+ +M ++ ++PD V++ S+L A
Sbjct: 509 -----------------YGCMIDLLGHSGL----FKEAEEMINMMEMEPDGVIWCSLLKA 547
Query: 444 CSHSGMVDDGLSFFKSMQSNFGIEP-SIEHYLCLVDLLGRAGRFDLALKT 492
C G V+ G SF +++ IEP + Y+ L ++ AGR++ KT
Sbjct: 548 CKMHGNVELGESFAENL---IKIEPENPGSYVLLSNIYASAGRWNEVAKT 594
>sp|Q9SUH6|PP341_ARATH Pentatricopeptide repeat-containing protein At4g30700
OS=Arabidopsis thaliana GN=DYW9 PE=2 SV=1
Length = 792
Score = 356 bits (914), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 196/626 (31%), Positives = 341/626 (54%), Gaps = 13/626 (2%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQ-TGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKV 59
++R + N S +LS ++ + + T + NS T+ + A + G+ +H +
Sbjct: 89 LMRGFSVNESPHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGRVIHGQAVVD 148
Query: 60 GFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAIL 119
G + + + ++ MY K +RKV D MP + + WN++IS + + + E+I
Sbjct: 149 GCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEK--DTILWNTMISGYRKNEMYVESIQ 206
Query: 120 VLKEMWVLG-LELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSM 174
V +++ L +T + ++ + R G+ +H K G +++ L +S+
Sbjct: 207 VFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTG-FISL 265
Query: 175 YAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVF 234
Y+K GK+ ++F E + IV++ +I GY + G + L ++
Sbjct: 266 YSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTL 325
Query: 235 LNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLE 294
++L+ G+L L ++H LKS + + + L ++Y+K ++E AR++FD E
Sbjct: 326 VSLV---PVSGHLMLIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPE 382
Query: 295 KSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEI 354
KS+ W +MI GY Q G +A++LF+ + K+ PN T+ LSACA+LG+LS GK +
Sbjct: 383 KSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWV 442
Query: 355 EEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMG 414
+ + ES+ V T+LI M++KCG I +A+ +F+ + K+ W+ MI+GY +HG G
Sbjct: 443 HDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQG 502
Query: 415 DQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYL 474
+ALN+FY+M + G+ P V + +L ACSH+G+V +G F SM +G EPS++HY
Sbjct: 503 QEALNIFYEMLN-SGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYA 561
Query: 475 CLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPG 534
C+VD+LGRAG AL+ I M +E + VW LL AC H + L ++ L L+P
Sbjct: 562 CMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLGACRIHKDTNLARTVSEKLFELDPD 621
Query: 535 STGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHL 594
+ G ++L++N+ ++ + +AAT R R+L K PG++ +EI + VF +GD+SH
Sbjct: 622 NVGYHVLLSNIHSADRNYPQAATVRQTAKKRKLAKAPGYTLIEIGETPHVFTSGDQSHPQ 681
Query: 595 SVDIRKTLKELHIKLLEAGYIAEADI 620
+I + L++L K+ EAGY E ++
Sbjct: 682 VKEIYEKLEKLEGKMREAGYQPETEL 707
Score = 47.0 bits (110), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 55/106 (51%), Gaps = 2/106 (1%)
Query: 347 SLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMIN 406
S+S + I+L+G ++ + T L S G I A+++F V D+ +++ ++
Sbjct: 32 SISHLAQTHAQIILHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNVLMR 91
Query: 407 GYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDD 452
G++++ +L++F ++ LKP++ Y +SA SG DD
Sbjct: 92 GFSVNESPHSSLSVFAHLRKSTDLKPNSSTYAFAISAA--SGFRDD 135
>sp|Q9STS9|PP268_ARATH Putative pentatricopeptide repeat-containing protein At3g47840
OS=Arabidopsis thaliana GN=PCMP-E43 PE=3 SV=1
Length = 706
Score = 356 bits (914), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 209/617 (33%), Positives = 330/617 (53%), Gaps = 14/617 (2%)
Query: 3 RNSTNNGSFEETLSTYSSM--LQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
R T N S +E L +S+M + V ++ +VLKAC ++I G+ +H++ +K
Sbjct: 80 RYVTANNS-DEALILFSAMRVVDHAVSPDTSVLSVVLKACGQSSNIAYGESLHAYAVKTS 138
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+V + L+DMY + S +V EMP R+ V+W +II+ A E +
Sbjct: 139 LLSSVYVGSSLLDMYKRVGKIDKSCRVFSEMP--FRNAVTWTAIITGLVHAGRYKEGLTY 196
Query: 121 LKEMWVLGLELSAS-TFVSVVSGCS-FRQ---GISMHCCVYKLGLLNNEIPLANSVMSMY 175
EM ELS + TF + C+ RQ G ++H V G + + +ANS+ +MY
Sbjct: 197 FSEM-SRSEELSDTYTFAIALKACAGLRQVKYGKAIHTHVIVRGFVTT-LCVANSLATMY 254
Query: 176 AKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFL 235
+ G++ + +F+ + E +VSWT++I Y +G +A +MR V P+ F
Sbjct: 255 TECGEMQDGLCLFENMSERDVVSWTSLIVAYKRIGQEVKAVETFIKMRNSQVPPNEQTFA 314
Query: 236 NLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEK 295
++ CA + L +H +L G N+ + N ++ MY+ CG+L A +F + +
Sbjct: 315 SMFSACASLSRLVWGEQLHCNVLSLGLNDSLSVSNSMMKMYSTCGNLVSASVLFQGMRCR 374
Query: 296 SVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIE 355
+ W+++IGGY Q G+ E F + ++ +P + LA+ LS + + G+++
Sbjct: 375 DIISWSTIIGGYCQAGFGEEGFKYFSWMRQSGTKPTDFALASLLSVSGNMAVIEGGRQVH 434
Query: 356 EYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGD 415
+ GLE N V++SLI+M+SKCG I +A +F D+ +AMINGYA HG
Sbjct: 435 ALALCFGLEQNSTVRSSLINMYSKCGSIKEASMIFGETDRDDIVSLTAMINGYAEHGKSK 494
Query: 416 QALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLC 475
+A++LF K V G +PD+V + S+L+AC+HSG +D G +F MQ + + P+ EHY C
Sbjct: 495 EAIDLFEKSLKV-GFRPDSVTFISVLTACTHSGQLDLGFHYFNMMQETYNMRPAKEHYGC 553
Query: 476 LVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGS 535
+VDLL RAGR A K I+EM + VW LL AC ++E G AA+ +L L+P
Sbjct: 554 MVDLLCRAGRLSDAEKMINEMSWKKDDVVWTTLLIACKAKGDIERGRRAAERILELDPTC 613
Query: 536 TGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLS 595
+ +AN+++S G +EAA R M + + KEPGWS ++I V FV+GDR H S
Sbjct: 614 ATALVTLANIYSSTGNLEEAANVRKNMKAKGVIKEPGWSSIKIKDCVSAFVSGDRFHPQS 673
Query: 596 VDIRKTLKELHIKLLEA 612
DI L EL + EA
Sbjct: 674 EDIYNIL-ELAVSGAEA 689
Score = 181 bits (460), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 116/408 (28%), Positives = 209/408 (51%), Gaps = 11/408 (2%)
Query: 83 SSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFV--SVV 140
++R+V D+MP +VSW SII + A +DEA+++ M V+ +S T V V+
Sbjct: 58 AARQVFDKMP--HGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHAVSPDTSVLSVVL 115
Query: 141 SGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSI 196
C + G S+H K LL++ + + +S++ MY + GK++++ +F E+ +
Sbjct: 116 KACGQSSNIAYGESLHAYAVKTSLLSS-VYVGSSLLDMYKRVGKIDKSCRVFSEMPFRNA 174
Query: 197 VSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSL 256
V+WT II G V+ G E ++M R D F + CA + + ++H+
Sbjct: 175 VTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQVKYGKAIHTH 234
Query: 257 LLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEA 316
++ G+ + N L +MYT+CG+++ +F+ + E+ V WTS+I Y ++G +A
Sbjct: 235 VIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDVVSWTSLIVAYKRIGQEVKA 294
Query: 317 VNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHM 376
V F ++ + V PNE T A+ SACA L L G+++ ++ GL + V S++ M
Sbjct: 295 VETFIKMRNSQVPPNEQTFASMFSACASLSRLVWGEQLHCNVLSLGLNDSLSVSNSMMKM 354
Query: 377 FSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVV 436
+S CG + A +F+ + +D+ WS +I GY G G++ F M+ G KP
Sbjct: 355 YSTCGNLVSASVLFQGMRCRDIISWSTIIGGYCQAGFGEEGFKYFSWMRQ-SGTKPTDFA 413
Query: 437 YTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAG 484
S+LS + +++ G ++ FG+E + L+++ + G
Sbjct: 414 LASLLSVSGNMAVIEGGRQ-VHALALCFGLEQNSTVRSSLINMYSKCG 460
Score = 137 bits (345), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 77/269 (28%), Positives = 140/269 (52%), Gaps = 3/269 (1%)
Query: 179 GKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRM--SVTPDLVVFLN 236
G + AR +FD++ IVSWT+II YV N +EA L + MR + +V+PD V
Sbjct: 54 GNLRAARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHAVSPDTSVLSV 113
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
++ C Q N+ S+H+ +K+ + + + L+ MY + G ++ + RVF + ++
Sbjct: 114 VLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSCRVFSEMPFRN 173
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEE 356
WT++I G G E + F + ++ + T A L ACA L + GK I
Sbjct: 174 AVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQVKYGKAIHT 233
Query: 357 YIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQ 416
++++ G + V SL M+++CG + +FE + ++D+ W+++I Y G +
Sbjct: 234 HVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDVVSWTSLIVAYKRIGQEVK 293
Query: 417 ALNLFYKMQHVEGLKPDAVVYTSILSACS 445
A+ F KM++ + + P+ + S+ SAC+
Sbjct: 294 AVETFIKMRNSQ-VPPNEQTFASMFSACA 321
>sp|Q9SVP7|PP307_ARATH Pentatricopeptide repeat-containing protein At4g13650
OS=Arabidopsis thaliana GN=PCMP-H42 PE=2 SV=2
Length = 1064
Score = 356 bits (913), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 191/623 (30%), Positives = 339/623 (54%), Gaps = 12/623 (1%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+I + G E+ + + M G+ +S T ++ AC+ +++ G+++H++ K+G
Sbjct: 360 LINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLG 419
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLND--EAI 118
F + ++ L+++Y+KC+D ++ E V +VV WN ++ A+ L+D +
Sbjct: 420 FASNNKIEGALLNLYAKCADIETALDYFLETEVE--NVVLWNVMLVAY--GLLDDLRNSF 475
Query: 119 LVLKEMWVLGLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSM 174
+ ++M + + + T+ S++ C G +H + K N + + ++ M
Sbjct: 476 RIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAY-VCSVLIDM 534
Query: 175 YAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVF 234
YAK GK++ A I +VSWTT+I GY ++A QM + D V
Sbjct: 535 YAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGL 594
Query: 235 LNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLE 294
N + CA + L +H+ SG++++ P N LV++Y++CG +E + F+
Sbjct: 595 TNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEA 654
Query: 295 KSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEI 354
W +++ G+ Q G EA+ +F R+ + + N T + + A +E ++ +GK++
Sbjct: 655 GDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQV 714
Query: 355 EEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMG 414
I G +S +V +LI M++KCG I+ A++ F V K+ W+A+IN Y+ HG G
Sbjct: 715 HAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFG 774
Query: 415 DQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYL 474
+AL+ F +M H ++P+ V +LSACSH G+VD G+++F+SM S +G+ P EHY+
Sbjct: 775 SEALDSFDQMIH-SNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYV 833
Query: 475 CLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPG 534
C+VD+L RAG A + I EMP++ A VW LLSAC+ H N+E+GE+AA +LL L P
Sbjct: 834 CVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHKNMEIGEFAAHHLLELEPE 893
Query: 535 STGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHL 594
+ Y+L++NL+ + W R M ++ + KEPG S +E+ S+ F GD++H L
Sbjct: 894 DSATYVLLSNLYAVSKKWDARDLTRQKMKEKGVKKEPGQSWIEVKNSIHSFYVGDQNHPL 953
Query: 595 SVDIRKTLKELHIKLLEAGYIAE 617
+ +I + ++L + E GY+ +
Sbjct: 954 ADEIHEYFQDLTKRASEIGYVQD 976
Score = 204 bits (518), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 138/493 (27%), Positives = 241/493 (48%), Gaps = 12/493 (2%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDG-KRVHSHVLKV 59
MI+ + E + M+ V N TF VL+AC + +D +++H+ +L
Sbjct: 157 MIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARILYQ 216
Query: 60 GFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAIL 119
G + V LID+YS+ +R+V D + RL+ SW ++IS S+ EAI
Sbjct: 217 GLRDSTVVCNPLIDLYSRNGFVDLARRVFDGL--RLKDHSSWVAMISGLSKNECEAEAIR 274
Query: 120 VLKEMWVLGLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMY 175
+ +M+VLG+ + F SV+S C S G +H V KLG +++ + N+++S+Y
Sbjct: 275 LFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGF-SSDTYVCNALVSLY 333
Query: 176 AKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFL 235
G + A IF + + V++ T+I G G +A L +M + PD
Sbjct: 334 FHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLA 393
Query: 236 NLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEK 295
+L++ C+ G LF +H+ K G+ + + ++ L+++Y KC D+E A F +
Sbjct: 394 SLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVE 453
Query: 296 SVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIE 355
+V LW M+ Y L + +F+++ + PN+ T + L C LG L G++I
Sbjct: 454 NVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIH 513
Query: 356 EYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGD 415
I+ + N V + LI M++K G+++ A ++ R KD+ W+ MI GY + D
Sbjct: 514 SQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDD 573
Query: 416 QALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFF-KSMQSNFGIEPSIEHYL 474
+AL F +M G++ D V T+ +SAC+ + +G ++ S F + ++
Sbjct: 574 KALTTFRQMLD-RGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQN-- 630
Query: 475 CLVDLLGRAGRFD 487
LV L R G+ +
Sbjct: 631 ALVTLYSRCGKIE 643
Score = 194 bits (494), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 129/493 (26%), Positives = 244/493 (49%), Gaps = 19/493 (3%)
Query: 6 TNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANIN-SIWDGKRVHSHVLKVGFQQD 64
+ + SF+E S+ G+ N T +L+ C N S+ +G+++HS +LK+G +
Sbjct: 62 SEDESFQE--KRIDSVENRGIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSN 119
Query: 65 AFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEM 124
+ L D Y D + KV DEMP R++ +WN +I + L E + M
Sbjct: 120 GCLSEKLFDFYLFKGDLYGAFKVFDEMPE--RTIFTWNKMIKELASRNLIGEVFGLFVRM 177
Query: 125 WVLGLELSASTFVSVVSGC-----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFG 179
+ + TF V+ C +F +H + GL ++ + + N ++ +Y++ G
Sbjct: 178 VSENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARILYQGLRDSTV-VCNPLIDLYSRNG 236
Query: 180 KVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLIL 239
V+ AR +FD + SW +I G EA L M + + P F +++
Sbjct: 237 FVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLS 296
Query: 240 GCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFL 299
C ++ +L + +H L+LK G++++ + N LVS+Y G+L A +F + ++
Sbjct: 297 ACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVT 356
Query: 300 WTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIV 359
+ ++I G +Q GY +A+ LFKR+ + P+ TLA+ + AC+ G+L +G+++ Y
Sbjct: 357 YNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTT 416
Query: 360 LNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALN 419
G SN +++ +L+++++KC I A + F +++ +W+ M+ Y + +
Sbjct: 417 KLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFR 476
Query: 420 LFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKS-MQSNFGIEPSIEHYLC--L 476
+F +MQ +E + P+ Y SIL C G ++ G +++NF + Y+C L
Sbjct: 477 IFRQMQ-IEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNA----YVCSVL 531
Query: 477 VDLLGRAGRFDLA 489
+D+ + G+ D A
Sbjct: 532 IDMYAKLGKLDTA 544
>sp|Q9SIT7|PP151_ARATH Pentatricopeptide repeat-containing protein At2g13600
OS=Arabidopsis thaliana GN=PCMP-E76 PE=3 SV=1
Length = 697
Score = 354 bits (908), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 208/650 (32%), Positives = 336/650 (51%), Gaps = 80/650 (12%)
Query: 20 SMLQTGVHGNSFT----FPLVLKAC--ANINSIWDGKRVHSHVLKVGFQQDAFVQTGLID 73
S L+ +SFT F +L +C + +++I+ + VH+ V+K GF + F+Q LID
Sbjct: 5 SFLKLAADLSSFTDSSPFAKLLDSCIKSKLSAIY-VRYVHASVIKSGFSNEIFIQNRLID 63
Query: 74 MYSKCSDFVSSRKVLDEMPVR-----------------------------LRSVVSWNSI 104
YSKC R+V D+MP R R +WNS+
Sbjct: 64 AYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSM 123
Query: 105 ISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGL 160
+S ++ +EA+ M G L+ +F SV+S CS +G+ +H + K
Sbjct: 124 VSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPF 183
Query: 161 LNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCN 220
L++ + + ++++ MY+K G VN+A+ +FDE+G+ ++VSW ++I + G EA +
Sbjct: 184 LSD-VYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQ 242
Query: 221 QMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSG-YNNEDPLDNLLVSMYTKC 279
M V PD V ++I CA + + + +H ++K+ N+ L N V MY KC
Sbjct: 243 MMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKC 302
Query: 280 GDLELARRVFDAV-------------------------------LEKSVFLWTSMIGGYA 308
++ AR +FD++ E++V W ++I GY
Sbjct: 303 SRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYT 362
Query: 309 QLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGL----- 363
Q G EA++LF L + SV P + A L ACA+L L G + +++ +G
Sbjct: 363 QNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSG 422
Query: 364 -ESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFY 422
E + V SLI M+ KCG + + VF ++ ++D W+AMI G+A +G G++AL LF
Sbjct: 423 EEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFR 482
Query: 423 KMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGR 482
+M G KPD + +LSAC H+G V++G +F SM +FG+ P +HY C+VDLLGR
Sbjct: 483 EMLE-SGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGR 541
Query: 483 AGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILM 542
AG + A I EMP++ + +W LL+AC H N+ LG+Y A+ LL + P ++G Y+L+
Sbjct: 542 AGFLEEAKSMIEEMPMQPDSVIWGSLLAACKVHRNITLGKYVAEKLLEVEPSNSGPYVLL 601
Query: 543 ANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSH 592
+N++ G W++ R M +TK+PG S ++I G VF+ D+SH
Sbjct: 602 SNMYAELGKWEDVMNVRKSMRKEGVTKQPGCSWIKIQGHDHVFMVKDKSH 651
Score = 219 bits (559), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 141/454 (31%), Positives = 224/454 (49%), Gaps = 45/454 (9%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
M+ + EE L ++ M + G N ++F VL AC+ +N + G +VHS + K
Sbjct: 123 MVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSP 182
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F D ++ + L+DMYSKC + +++V DEM R+VVSWNS+I+ + EA+ V
Sbjct: 183 FLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGD--RNVVSWNSLITCFEQNGPAVEALDV 240
Query: 121 LKEMWVLGLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
+ M +E T SV+S C + + G +H V K L N+I L+N+ + MYA
Sbjct: 241 FQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYA 300
Query: 177 KFGKVNEARSIFDE------IGETS-------------------------IVSWTTIIGG 205
K ++ EAR IFD I ETS +VSW +I G
Sbjct: 301 KCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAG 360
Query: 206 YVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYN-- 263
Y G EA L ++R SV P F N++ CA + L L + H +LK G+
Sbjct: 361 YTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQ 420
Query: 264 --NEDPL--DNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNL 319
ED + N L+ MY KCG +E VF ++E+ W +MI G+AQ GY +EA+ L
Sbjct: 421 SGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALEL 480
Query: 320 FKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLN-GLESNRQVQTSLIHMFS 378
F+ +L++ +P+ T+ LSAC G + +G+ + + G+ R T ++ +
Sbjct: 481 FREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLG 540
Query: 379 KCGRINKAKEVFERVP-DKDLAVWSAMINGYAIH 411
+ G + +AK + E +P D +W +++ +H
Sbjct: 541 RAGFLEEAKSMIEEMPMQPDSVIWGSLLAACKVH 574
>sp|Q9LW32|PP258_ARATH Pentatricopeptide repeat-containing protein At3g26782,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H34 PE=2
SV=1
Length = 659
Score = 353 bits (907), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 195/532 (36%), Positives = 313/532 (58%), Gaps = 15/532 (2%)
Query: 98 VVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCS----FRQGISMHC 153
V SWNS+I+ +R+ + EA+L M L L + S+F + CS G H
Sbjct: 41 VFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSGKQTHQ 100
Query: 154 CVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVN 213
+ G ++I ++++++ MY+ GK+ +AR +FDEI + +IVSWT++I GY GN
Sbjct: 101 QAFVFGY-QSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNAL 159
Query: 214 EAFGLCNQMRRMSVTPDLVVFLN------LILGCAQVGNLFLALSMHSLLLKSGYNNEDP 267
+A L + D +FL+ +I C++V L S+HS ++K G++
Sbjct: 160 DAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGVS 219
Query: 268 LDNLLVSMYTKCGD--LELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLK 325
+ N L+ Y K G+ + +AR++FD +++K + S++ YAQ G +EA +F+RL+K
Sbjct: 220 VGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVK 279
Query: 326 TSVRP-NEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRIN 384
V N TL+T L A + G+L GK I + ++ GLE + V TS+I M+ KCGR+
Sbjct: 280 NKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVE 339
Query: 385 KAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSAC 444
A++ F+R+ +K++ W+AMI GY +HG +AL LF M G++P+ + + S+L+AC
Sbjct: 340 TARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMID-SGVRPNYITFVSVLAAC 398
Query: 445 SHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQV 504
SH+G+ +G +F +M+ FG+EP +EHY C+VDLLGRAG A I M ++ + +
Sbjct: 399 SHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDSII 458
Query: 505 WAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDD 564
W+ LL+AC H NVEL E + L L+ + G Y+L+++++ AG WK+ R +M +
Sbjct: 459 WSSLLAACRIHKNVELAEISVARLFELDSSNCGYYMLLSHIYADAGRWKDVERVRMIMKN 518
Query: 565 RRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKELHIKLLEAGYIA 616
R L K PG+S +E++G V VF+ GD H I + L EL+ KLLEAGY++
Sbjct: 519 RGLVKPPGFSLLELNGEVHVFLIGDEEHPQREKIYEFLAELNRKLLEAGYVS 570
Score = 200 bits (509), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 129/431 (29%), Positives = 224/431 (51%), Gaps = 28/431 (6%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+I + +G E L +SSM + ++ +FP +KAC+++ I+ GK+ H G
Sbjct: 47 VIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSGKQTHQQAFVFG 106
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+Q D FV + LI MYS C +RKV DE+P R++VSW S+I + +A+ +
Sbjct: 107 YQSDIFVSSALIVMYSTCGKLEDARKVFDEIP--KRNIVSWTSMIRGYDLNGNALDAVSL 164
Query: 121 LKEMWV------LGLELSASTFVSVVSGCSF--RQGI--SMHCCVYKLGLLNNEIPLANS 170
K++ V + L + VSV+S CS +G+ S+H V K G + + + N+
Sbjct: 165 FKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRG-FDRGVSVGNT 223
Query: 171 VMSMYAKFGK--VNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQM-RRMSV 227
++ YAK G+ V AR IFD+I + VS+ +I+ Y G NEAF + ++ + V
Sbjct: 224 LLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVV 283
Query: 228 TPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARR 287
T + + ++L + G L + +H +++ G ++ + ++ MY KCG +E AR+
Sbjct: 284 TFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARK 343
Query: 288 VFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGS 347
FD + K+V WT+MI GY G+ ++A+ LF ++ + VRPN T + L+AC+
Sbjct: 344 AFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSH--- 400
Query: 348 LSKGKEIEEYIVLNGLESNRQVQTSLIH------MFSKCGRINKAKEVFERVPDK-DLAV 400
G +E + N ++ V+ L H + + G + KA ++ +R+ K D +
Sbjct: 401 --AGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDSII 458
Query: 401 WSAMINGYAIH 411
WS+++ IH
Sbjct: 459 WSSLLAACRIH 469
Score = 142 bits (357), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 101/401 (25%), Positives = 193/401 (48%), Gaps = 32/401 (7%)
Query: 191 IGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLA 250
+ +T + SW ++I G+ EA + MR++S+ P F I C+ + ++F
Sbjct: 36 VDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSG 95
Query: 251 LSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQL 310
H GY ++ + + L+ MY+ CG LE AR+VFD + ++++ WTSMI GY
Sbjct: 96 KQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLN 155
Query: 311 GYPSEAVNLFKRLLKTSVRPNEAT------LATTLSACAELGSLSKGKEIEEYIVLNGLE 364
G +AV+LFK LL ++A L + +SAC+ + + + I +++ G +
Sbjct: 156 GNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFD 215
Query: 365 SNRQVQTSLIHMFSKCGR--INKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFY 422
V +L+ ++K G + A+++F+++ DKD ++++++ YA GM ++A +F
Sbjct: 216 RGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFR 275
Query: 423 KMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGR 482
++ + + +A+ +++L A SHSG + G + G+E + ++D+ +
Sbjct: 276 RLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQV-IRMGLEDDVIVGTSIIDMYCK 334
Query: 483 AGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNL----LTLNPGSTGN 538
GR + A K M + + W +++ H +AAK L ++ G N
Sbjct: 335 CGRVETARKAFDRMKNK-NVRSWTAMIAGYGMH------GHAAKALELFPAMIDSGVRPN 387
Query: 539 YILMANLFTS---AGM----WKEAATARGLMDDRRLTKEPG 572
YI ++ + AG+ W+ +G R EPG
Sbjct: 388 YITFVSVLAACSHAGLHVEGWRWFNAMKG-----RFGVEPG 423
>sp|O23337|PP311_ARATH Pentatricopeptide repeat-containing protein At4g14820
OS=Arabidopsis thaliana GN=PCMP-H3 PE=2 SV=1
Length = 722
Score = 351 bits (901), Expect = 9e-96, Method: Compositional matrix adjust.
Identities = 191/619 (30%), Positives = 332/619 (53%), Gaps = 45/619 (7%)
Query: 37 LKACANINSIWDGKRVHSHVLK--VGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVR 94
L C ++N I K++H+H+L+ + + ++F+ + S + + V +P
Sbjct: 19 LSFCKSLNHI---KQLHAHILRTVINHKLNSFLFNLSVSSSSINLSY--ALNVFSSIPSP 73
Query: 95 LRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCS----FRQGIS 150
S+V +N + SR+ IL + + +G L +F+ ++ S +G+
Sbjct: 74 PESIV-FNPFLRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAVSKVSALFEGME 132
Query: 151 MHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVG 210
+H +K+ L + + M MYA G++N AR++FDE+ +V+W T+I Y G
Sbjct: 133 LHGVAFKIATLCDPF-VETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFG 191
Query: 211 NVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDN 270
V+EAF L +M+ +V PD ++ N++ C + GN+ +++ L+++ + L
Sbjct: 192 LVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLT 251
Query: 271 LLVSMY-------------------------------TKCGDLELARRVFDAVLEKSVFL 299
LV+MY +KCG L+ A+ +FD +K +
Sbjct: 252 ALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVC 311
Query: 300 WTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIV 359
WT+MI Y + YP EA+ +F+ + + ++P+ ++ + +SACA LG L K K + I
Sbjct: 312 WTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIH 371
Query: 360 LNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALN 419
+NGLES + +LI+M++KCG ++ ++VFE++P +++ WS+MIN ++HG AL+
Sbjct: 372 VNGLESELSINNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMINALSMHGEASDALS 431
Query: 420 LFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDL 479
LF +M+ E ++P+ V + +L CSHSG+V++G F SM + I P +EHY C+VDL
Sbjct: 432 LFARMKQ-ENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKLEHYGCMVDL 490
Query: 480 LGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNY 539
GRA AL+ I MPV +W L+SAC H +ELG++AAK +L L P G
Sbjct: 491 FGRANLLREALEVIESMPVASNVVIWGSLMSACRIHGELELGKFAAKRILELEPDHDGAL 550
Query: 540 ILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIR 599
+LM+N++ W++ R +M+++ + KE G S+++ +G F+ GD+ H S +I
Sbjct: 551 VLMSNIYAREQRWEDVRNIRRVMEEKNVFKEKGLSRIDQNGKSHEFLIGDKRHKQSNEIY 610
Query: 600 KTLKELHIKLLEAGYIAEA 618
L E+ KL AGY+ +
Sbjct: 611 AKLDEVVSKLKLAGYVPDC 629
Score = 197 bits (500), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 129/473 (27%), Positives = 234/473 (49%), Gaps = 51/473 (10%)
Query: 2 IRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGF 61
+R+ + + T+ Y + G + F+F +LKA + ++++++G +H K+
Sbjct: 83 LRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAVSKVSALFEGMELHGVAFKIAT 142
Query: 62 QQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVL 121
D FV+TG +DMY+ C +R V DEM R VV+WN++I + R L DEA +
Sbjct: 143 LCDPFVETGFMDMYASCGRINYARNVFDEMS--HRDVVTWNTMIERYCRFGLVDEAFKLF 200
Query: 122 KEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGLLNNEIPL-------------- 167
+EM + ++VS C + + +Y+ L+ N++ +
Sbjct: 201 EEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEF-LIENDVRMDTHLLTALVTMYAG 259
Query: 168 ---------------------ANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGY 206
+ +++S Y+K G++++A+ IFD+ + +V WTT+I Y
Sbjct: 260 AGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAY 319
Query: 207 VNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNED 266
V EA + +M + PD+V ++I CA +G L A +HS + +G +E
Sbjct: 320 VESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHVNGLESEL 379
Query: 267 PLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKT 326
++N L++MY KCG L+ R VF+ + ++V W+SMI + G S+A++LF R+ +
Sbjct: 380 SINNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMINALSMHGEASDALSLFARMKQE 439
Query: 327 SVRPNEATLATTLSACAELGSLSKGKEI-----EEYIVLNGLESNRQVQTSLIHMFSKCG 381
+V PNE T L C+ G + +GK+I +EY + LE ++ +F +
Sbjct: 440 NVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKLEH----YGCMVDLFGRAN 495
Query: 382 RINKAKEVFERVP-DKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPD 433
+ +A EV E +P ++ +W ++++ IH G+ L F + +E L+PD
Sbjct: 496 LLREALEVIESMPVASNVVIWGSLMSACRIH--GELELGKFAAKRILE-LEPD 545
Score = 94.0 bits (232), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 60/278 (21%), Positives = 127/278 (45%), Gaps = 34/278 (12%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI G +E + M + V + ++ AC ++ + ++ +++
Sbjct: 183 MIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIEND 242
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVR-------------------------- 94
+ D + T L+ MY+ +R+ +M VR
Sbjct: 243 VRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFD 302
Query: 95 ---LRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCS----FRQ 147
+ +V W ++ISA+ + EA+ V +EM G++ + SV+S C+ +
Sbjct: 303 QTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDK 362
Query: 148 GISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYV 207
+H C++ G L +E+ + N++++MYAK G ++ R +F+++ ++VSW+++I
Sbjct: 363 AKWVHSCIHVNG-LESELSINNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMINALS 421
Query: 208 NVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVG 245
G ++A L +M++ +V P+ V F+ ++ GC+ G
Sbjct: 422 MHGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSG 459
Score = 40.4 bits (93), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 54/108 (50%), Gaps = 2/108 (1%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI + +G + LS ++ M Q V N TF VL C++ + +GK++ + +
Sbjct: 416 MINALSMHGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEY 475
Query: 61 FQQDAFVQTG-LIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISA 107
G ++D++ + + + +V++ MPV +VV W S++SA
Sbjct: 476 NITPKLEHYGCMVDLFGRANLLREALEVIESMPV-ASNVVIWGSLMSA 522
>sp|Q9STE1|PP333_ARATH Pentatricopeptide repeat-containing protein At4g21300
OS=Arabidopsis thaliana GN=PCMP-E36 PE=3 SV=1
Length = 857
Score = 348 bits (894), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 192/621 (30%), Positives = 340/621 (54%), Gaps = 7/621 (1%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
M+ G+ + + +S M + N+ TF VL CA+ I G ++H V+ G
Sbjct: 210 MLNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSG 269
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+ ++ L+ MYSKC F + K+ M V+WN +IS + ++ L +E++
Sbjct: 270 VDFEGSIKNSLLSMYSKCGRFDDASKLFRMM--SRADTVTWNCMISGYVQSGLMEESLTF 327
Query: 121 LKEMWVLGLELSASTFVSVVSGCSFRQGI----SMHCCVYKLGLLNNEIPLANSVMSMYA 176
EM G+ A TF S++ S + + +HC + + + + +I L ++++ Y
Sbjct: 328 FYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSI-SLDIFLTSALIDAYF 386
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K V+ A++IF + +V +T +I GY++ G ++ + + ++ ++P+ + ++
Sbjct: 387 KCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVS 446
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
++ + L L +H ++K G++N + ++ MY KCG + LA +F+ + ++
Sbjct: 447 ILPVIGILLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRD 506
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEE 356
+ W SMI AQ PS A+++F+++ + + + +++ LSACA L S S GK I
Sbjct: 507 IVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHG 566
Query: 357 YIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQ 416
+++ + L S+ +++LI M++KCG + A VF+ + +K++ W+++I HG
Sbjct: 567 FMIKHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEKNIVSWNSIIAACGNHGKLKD 626
Query: 417 ALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCL 476
+L LF++M G++PD + + I+S+C H G VD+G+ FF+SM ++GI+P EHY C+
Sbjct: 627 SLCLFHEMVEKSGIRPDQITFLEIISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEHYACV 686
Query: 477 VDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGST 536
VDL GRAGR A +T+ MP A VW LL AC H NVEL E A+ L+ L+P ++
Sbjct: 687 VDLFGRAGRLTEAYETVKSMPFPPDAGVWGTLLGACRLHKNVELAEVASSKLMDLDPSNS 746
Query: 537 GNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSV 596
G Y+L++N +A W+ R LM +R + K PG+S +EI+ +FV+GD +H S
Sbjct: 747 GYYVLISNAHANAREWESVTKVRSLMKEREVQKIPGYSWIEINKRTHLFVSGDVNHPESS 806
Query: 597 DIRKTLKELHIKLLEAGYIAE 617
I L L +L GYI +
Sbjct: 807 HIYSLLNSLLGELRLEGYIPQ 827
Score = 201 bits (511), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 140/524 (26%), Positives = 252/524 (48%), Gaps = 20/524 (3%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+I + NG + L+ Y ML GV + TFP ++KAC + + + V +G
Sbjct: 109 IISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGIDFLSDTVSSLG 168
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+ FV + LI Y + K+ D V + V WN +++ +++ D I
Sbjct: 169 MDCNEFVASSLIKAYLEYGKIDVPSKLFDR--VLQKDCVIWNVMLNGYAKCGALDSVIKG 226
Query: 121 LKEMWVLGLELSASTFVSVVSGCSFR----QGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
M + + +A TF V+S C+ + G+ +H V G ++ E + NS++SMY+
Sbjct: 227 FSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSG-VDFEGSIKNSLLSMYS 285
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K G+ ++A +F + V+W +I GYV G + E+ +M V PD + F +
Sbjct: 286 KCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSS 345
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
L+ ++ NL +H +++ + + L + L+ Y KC + +A+ +F
Sbjct: 346 LLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVD 405
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEE 356
V ++T+MI GY G +++ +F+ L+K + PNE TL + L L +L G+E+
Sbjct: 406 VVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRELHG 465
Query: 357 YIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQ 416
+I+ G ++ + ++I M++KCGR+N A E+FER+ +D+ W++MI A
Sbjct: 466 FIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSA 525
Query: 417 ALNLFYKMQHVEGLKPDAVVYTSILSACSH-----SGMVDDGLSFFKSMQSNFGIEPSIE 471
A+++F +M V G+ D V ++ LSAC++ G G S+ S+ E +
Sbjct: 526 AIDIFRQMG-VSGICYDCVSISAALSACANLPSESFGKAIHGFMIKHSLASDVYSEST-- 582
Query: 472 HYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKH 515
L+D+ + G A+ M E W +++AC H
Sbjct: 583 ----LIDMYAKCGNLKAAMNVFKTMK-EKNIVSWNSIIAACGNH 621
Score = 194 bits (492), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 128/498 (25%), Positives = 243/498 (48%), Gaps = 30/498 (6%)
Query: 35 LVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVR 94
L+L+AC+N N + GK+VH+ ++ D++ ++ MY+ C F K+ + +R
Sbjct: 40 LLLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLDLR 99
Query: 95 LRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGC----SFRQGIS 150
S+ WNSIIS+ R L ++A+ +M G+ STF +V C +F+
Sbjct: 100 RSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGIDF 159
Query: 151 MHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVG 210
+ V LG+ NE +A+S++ Y ++GK++ +FD + + V W ++ GY G
Sbjct: 160 LSDTVSSLGMDCNEF-VASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCG 218
Query: 211 NVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDN 270
++ + MR ++P+ V F ++ CA + L + +H L++ SG + E + N
Sbjct: 219 ALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKN 278
Query: 271 LLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRP 330
L+SMY+KCG + A ++F + W MI GY Q G E++ F ++ + V P
Sbjct: 279 SLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLP 338
Query: 331 NEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVF 390
+ T ++ L + ++ +L K+I YI+ + + + + ++LI + KC ++ A+ +F
Sbjct: 339 DAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIF 398
Query: 391 ERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACS----- 445
+ D+ V++AMI+GY +G+ +L +F + V+ + P+ + SIL
Sbjct: 399 SQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVK-ISPNEITLVSILPVIGILLAL 457
Query: 446 ------HSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVE 499
H ++ G + N G ++D+ + GR +LA + I E +
Sbjct: 458 KLGRELHGFIIKKGF----DNRCNIGCA--------VIDMYAKCGRMNLAYE-IFERLSK 504
Query: 500 VQAQVWAPLLSACMKHHN 517
W +++ C + N
Sbjct: 505 RDIVSWNSMITRCAQSDN 522
Score = 58.5 bits (140), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 68/127 (53%), Gaps = 7/127 (5%)
Query: 324 LKTSVRPNEATLATTLS----ACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSK 379
L+ S R E T+ LS AC+ L +GK++ ++++N + + ++ M++
Sbjct: 23 LRNSSRFLEETIPRRLSLLLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAM 82
Query: 380 CGRINKAKEVFERVPDKDLAV--WSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVY 437
CG + ++F R+ + ++ W+++I+ + +G+ +QAL ++KM G+ PD +
Sbjct: 83 CGSFSDCGKMFYRLDLRRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCF-GVSPDVSTF 141
Query: 438 TSILSAC 444
++ AC
Sbjct: 142 PCLVKAC 148
>sp|O04659|PP398_ARATH Pentatricopeptide repeat-containing protein At5g27110
OS=Arabidopsis thaliana GN=PCMP-E14 PE=2 SV=2
Length = 691
Score = 348 bits (894), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 196/593 (33%), Positives = 321/593 (54%), Gaps = 10/593 (1%)
Query: 6 TNNGSFEETLSTYSSMLQTGVH-GNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQD 64
+ N F +TL + +L + +SFTFP V+KA + + G+ +H+ V+K G+ D
Sbjct: 82 SKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGALGREFLGRMIHTLVVKSGYVCD 141
Query: 65 AFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEM 124
V + L+ MY+K + F +S +V DEMP R V SWN++IS ++ ++A+ + M
Sbjct: 142 VVVASSLVGMYAKFNLFENSLQVFDEMPER--DVASWNTVISCFYQSGEAEKALELFGRM 199
Query: 125 WVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGK 180
G E ++ + +S CS +G +H K G +E + ++++ MY K
Sbjct: 200 ESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEY-VNSALVDMYGKCDC 258
Query: 181 VNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILG 240
+ AR +F ++ S+V+W ++I GYV G+ + N+M P ++++
Sbjct: 259 LEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMA 318
Query: 241 CAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLW 300
C++ NL +H +++S N + ++ L+ +Y KCG+ LA VF + W
Sbjct: 319 CSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAETVFSKTQKDVAESW 378
Query: 301 TSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVL 360
MI Y +G +AV ++ +++ V+P+ T + L AC++L +L KGK+I I
Sbjct: 379 NVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIHLSISE 438
Query: 361 NGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNL 420
+ LE++ + ++L+ M+SKCG +A +F +P KD+ W+ MI+ Y HG +AL
Sbjct: 439 SRLETDELLLSALLDMYSKCGNEKEAFRIFNSIPKKDVVSWTVMISAYGSHGQPREALYQ 498
Query: 421 FYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLL 480
F +MQ GLKPD V ++LSAC H+G++D+GL FF M+S +GIEP IEHY C++D+L
Sbjct: 499 FDEMQKF-GLKPDGVTLLAVLSACGHAGLIDEGLKFFSQMRSKYGIEPIIEHYSCMIDIL 557
Query: 481 GRAGRFDLALKTIHEMP-VEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNY 539
GRAGR A + I + P A++ + L SAC H LG+ A+ L+ P Y
Sbjct: 558 GRAGRLLEAYEIIQQTPETSDNAELLSTLFSACCLHLEHSLGDRIARLLVENYPDDASTY 617
Query: 540 ILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSH 592
+++ NL+ S W A R M + L K+PG S +E+ V F A DRSH
Sbjct: 618 MVLFNLYASGESWDAARRVRLKMKEMGLRKKPGCSWIEMSDKVCHFFAEDRSH 670
Score = 208 bits (530), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 143/486 (29%), Positives = 241/486 (49%), Gaps = 11/486 (2%)
Query: 36 VLKACAN-INSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVR 94
+L+ C N S+ K VH +L +G ++D + LI++Y C D S+R V + +R
Sbjct: 9 LLRECTNSTKSLRRIKLVHQRILTLGLRRDVVLCKSLINVYFTCKDHCSARHVFENFDIR 68
Query: 95 LRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSAS-TFVSVVS--GCSFRQ--GI 149
V WNS++S +S+ + + + V K + + + S TF +V+ G R+ G
Sbjct: 69 -SDVYIWNSLMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGALGREFLGR 127
Query: 150 SMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNV 209
+H V K G + + + +A+S++ MYAKF + +FDE+ E + SW T+I +
Sbjct: 128 MIHTLVVKSGYVCD-VVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQS 186
Query: 210 GNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLD 269
G +A L +M P+ V I C+++ L +H +K G+ ++ ++
Sbjct: 187 GEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYVN 246
Query: 270 NLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVR 329
+ LV MY KC LE+AR VF + KS+ W SMI GY G V + R++ R
Sbjct: 247 SALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTR 306
Query: 330 PNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEV 389
P++ TL + L AC+ +L GK I Y++ + + ++ V SLI ++ KCG N A+ V
Sbjct: 307 PSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAETV 366
Query: 390 FERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGM 449
F + W+ MI+ Y G +A+ ++ +M V G+KPD V +TS+L ACS
Sbjct: 367 FSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSV-GVKPDVVTFTSVLPACSQLAA 425
Query: 450 VDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLL 509
++ G S+ S +E L+D+ + G A + + +P + W ++
Sbjct: 426 LEKGKQIHLSI-SESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIP-KKDVVSWTVMI 483
Query: 510 SACMKH 515
SA H
Sbjct: 484 SAYGSH 489
Score = 103 bits (258), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 90/365 (24%), Positives = 158/365 (43%), Gaps = 39/365 (10%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI+ G + + + M+ G + T +L AC+ ++ GK +H +V++
Sbjct: 280 MIKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSV 339
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
D +V LID+Y KC + + V + + SWN +IS++ +A+ V
Sbjct: 340 VNADIYVNCSLIDLYFKCGEANLAETVFSKTQKDVAE--SWNVMISSYISVGNWFKAVEV 397
Query: 121 LKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
+M +G++ TF SV+ CS +G +H + + L +E+ L ++++ MY+
Sbjct: 398 YDQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIHLSISESRLETDEL-LLSALLDMYS 456
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K G EA IF+ I + +VSWT +I Y + G EA ++M++ + PD V L
Sbjct: 457 KCGNEKEAFRIFNSIPKKDVVSWTVMISAYGSHGQPREALYQFDEMQKFGLKPDGVTLLA 516
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
++ C G + L S ++S Y E +++
Sbjct: 517 VLSACGHAGLIDEGLKFFS-QMRSKYGIEPIIEH-------------------------- 549
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEE 356
++ MI + G EA + ++ +TS N L+T SAC S G I
Sbjct: 550 ---YSCMIDILGRAGRLLEAYEIIQQTPETS--DNAELLSTLFSACCLHLEHSLGDRIAR 604
Query: 357 YIVLN 361
+V N
Sbjct: 605 LLVEN 609
>sp|Q9SS97|PP205_ARATH Putative pentatricopeptide repeat-containing protein At3g01580
OS=Arabidopsis thaliana GN=PCMP-E87 PE=3 SV=2
Length = 660
Score = 347 bits (891), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 200/619 (32%), Positives = 318/619 (51%), Gaps = 12/619 (1%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLK-V 59
++++ + +EE L +S M + ++FT P+ LKAC + + G+ +H V K V
Sbjct: 31 LLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKACGELREVNYGEMIHGFVKKDV 90
Query: 60 GFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAIL 119
D +V + LI MY KC + + ++ DE+ +V+W+S++S + +A+
Sbjct: 91 TLGSDLYVGSSLIYMYIKCGRMIEALRMFDEL--EKPDIVTWSSMVSGFEKNGSPYQAVE 148
Query: 120 VLKEMWVLGLELSAS--TFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMS 173
+ M V+ +++ T +++VS C+ R G +H V + G +N++ L NS+++
Sbjct: 149 FFRRM-VMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIRRGF-SNDLSLVNSLLN 206
Query: 174 MYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVV 233
YAK EA ++F I E ++SW+T+I YV G EA + N M P++
Sbjct: 207 CYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLVFNDMMDDGTEPNVAT 266
Query: 234 FLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVL 293
L ++ CA +L H L ++ G E + LV MY KC E A VF +
Sbjct: 267 VLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAVFSRIP 326
Query: 294 EKSVFLWTSMIGGYAQLGYPSEAVNLFK-RLLKTSVRPNEATLATTLSACAELGSLSKGK 352
K V W ++I G+ G ++ F LL+ + RP+ + L +C+ELG L + K
Sbjct: 327 RKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMVKVLGSCSELGFLEQAK 386
Query: 353 EIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHG 412
Y++ G +SN + SL+ ++S+CG + A +VF + KD VW+++I GY IHG
Sbjct: 387 CFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGIALKDTVVWTSLITGYGIHG 446
Query: 413 MGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEH 472
G +AL F M +KP+ V + SILSACSH+G++ +GL FK M +++ + P++EH
Sbjct: 447 KGTKALETFNHMVKSSEVKPNEVTFLSILSACSHAGLIHEGLRIFKLMVNDYRLAPNLEH 506
Query: 473 YLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLN 532
Y LVDLLGR G D A++ MP Q+ LL AC H N E+ E AK L L
Sbjct: 507 YAVLVDLLGRVGDLDTAIEITKRMPFSPTPQILGTLLGACRIHQNGEMAETVAKKLFELE 566
Query: 533 PGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSH 592
G Y+LM+N++ G W+ R + R + K S +EI V FVA D H
Sbjct: 567 SNHAGYYMLMSNVYGVKGEWENVEKLRNSVKQRGIKKGLAESLIEIRRKVHRFVADDELH 626
Query: 593 HLSVDIRKTLKELHIKLLE 611
+ LKEL + + E
Sbjct: 627 PEKEPVYGLLKELDLHMKE 645
Score = 122 bits (306), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 92/383 (24%), Positives = 176/383 (45%), Gaps = 14/383 (3%)
Query: 172 MSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDL 231
M KF +AR +F E+ + S+ W T++ E + M R PD
Sbjct: 1 MGFCRKFSSSVDARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDN 60
Query: 232 VVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNED-PLDNLLVSMYTKCGDLELARRVFD 290
+ C ++ + +H + K D + + L+ MY KCG + A R+FD
Sbjct: 61 FTLPVALKACGELREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFD 120
Query: 291 AVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTS-VRPNEATLATTLSACAELGSLS 349
+ + + W+SM+ G+ + G P +AV F+R++ S V P+ TL T +SAC +L +
Sbjct: 121 ELEKPDIVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSR 180
Query: 350 KGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYA 409
G+ + +++ G ++ + SL++ ++K +A +F+ + +KD+ WS +I Y
Sbjct: 181 LGRCVHGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYV 240
Query: 410 IHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPS 469
+G +AL +F M +G +P+ +L AC+ + ++ G + + G+E
Sbjct: 241 QNGAAAEALLVFNDMMD-DGTEPNVATVLCVLQACAAAHDLEQGRKTHE-LAIRKGLETE 298
Query: 470 IEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSAC----MKHHNVELGEYAA 525
++ LVD+ + + A +P + W L+S M H ++E E++
Sbjct: 299 VKVSTALVDMYMKCFSPEEAYAVFSRIPRK-DVVSWVALISGFTLNGMAHRSIE--EFS- 354
Query: 526 KNLLTLNPGSTGNYILMANLFTS 548
++ L + + ILM + S
Sbjct: 355 --IMLLENNTRPDAILMVKVLGS 375
>sp|Q9LFI1|PP280_ARATH Pentatricopeptide repeat-containing protein At3g53360,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E86 PE=2
SV=1
Length = 768
Score = 347 bits (891), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 204/619 (32%), Positives = 333/619 (53%), Gaps = 14/619 (2%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+I + NG E + Y MLQ + + F F ++KACA+ + + GK++H+ V+K+
Sbjct: 139 VITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGKQLHAQVIKLE 198
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
Q LI MY + + + +V +P ++ ++SW+SII+ S+ EA+
Sbjct: 199 SSSHLIAQNALIAMYVRFNQMSDASRVFYGIP--MKDLISWSSIIAGFSQLGFEFEALSH 256
Query: 121 LKEMWVLGL-ELSASTFVSVVSGCS--FRQ--GISMHCCVYKLGLLNNEIPLANSVMSMY 175
LKEM G+ + F S + CS R G +H K L N I S+ MY
Sbjct: 257 LKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAIA-GCSLCDMY 315
Query: 176 AKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFL 235
A+ G +N AR +FD+I SW II G N G +EA + +QMR PD +
Sbjct: 316 ARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLR 375
Query: 236 NLILGCAQVGNLFLA--LSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVL 293
+L+ CAQ + L+ + +HS ++K G+ + + N L++MYT C DL +F+
Sbjct: 376 SLL--CAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFR 433
Query: 294 EKSVFL-WTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGK 352
+ + W +++ Q P E + LFK +L + P+ T+ L C E+ SL G
Sbjct: 434 NNADSVSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGS 493
Query: 353 EIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHG 412
++ Y + GL + ++ LI M++KCG + +A+ +F+ + ++D+ WS +I GYA G
Sbjct: 494 QVHCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSMDNRDVVSWSTLIVGYAQSG 553
Query: 413 MGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEH 472
G++AL LF +M+ G++P+ V + +L+ACSH G+V++GL + +MQ+ GI P+ EH
Sbjct: 554 FGEEALILFKEMKSA-GIEPNHVTFVGVLTACSHVGLVEEGLKLYATMQTEHGISPTKEH 612
Query: 473 YLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLN 532
C+VDLL RAGR + A + I EM +E VW LLSAC NV L + AA+N+L ++
Sbjct: 613 CSCVVDLLARAGRLNEAERFIDEMKLEPDVVVWKTLLSACKTQGNVHLAQKAAENILKID 672
Query: 533 PGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSH 592
P ++ ++L+ ++ S+G W+ AA R M + K PG S +EI+ + +F A D H
Sbjct: 673 PFNSTAHVLLCSMHASSGNWENAALLRSSMKKHDVKKIPGQSWIEIEDKIHIFFAEDIFH 732
Query: 593 HLSVDIRKTLKELHIKLLE 611
DI L + ++L+
Sbjct: 733 PERDDIYTVLHNIWSQMLD 751
Score = 169 bits (427), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 108/386 (27%), Positives = 191/386 (49%), Gaps = 8/386 (2%)
Query: 135 TFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDE 190
T++S++ CS QG +H + + I L N ++SMY K G + +AR +FD
Sbjct: 69 TYISLICACSSSRSLAQGRKIHDHILNSNCKYDTI-LNNHILSMYGKCGSLRDAREVFDF 127
Query: 191 IGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLA 250
+ E ++VS+T++I GY G EA L +M + + PD F ++I CA ++ L
Sbjct: 128 MPERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLG 187
Query: 251 LSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQL 310
+H+ ++K ++ N L++MY + + A RVF + K + W+S+I G++QL
Sbjct: 188 KQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQL 247
Query: 311 GYPSEAVNLFKRLLKTSV-RPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQV 369
G+ EA++ K +L V PNE ++L AC+ L G +I + + L N
Sbjct: 248 GFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAIA 307
Query: 370 QTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEG 429
SL M+++CG +N A+ VF+++ D A W+ +I G A +G D+A+++F +M+ G
Sbjct: 308 GCSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRS-SG 366
Query: 430 LKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLA 489
PDA+ S+L A + + G+ S +G + L+ +
Sbjct: 367 FIPDAISLRSLLCAQTKPMALSQGMQ-IHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCC 425
Query: 490 LKTIHEMPVEVQAQVWAPLLSACMKH 515
+ + W +L+AC++H
Sbjct: 426 FNLFEDFRNNADSVSWNTILTACLQH 451
Score = 166 bits (421), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 120/446 (26%), Positives = 210/446 (47%), Gaps = 25/446 (5%)
Query: 5 STNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQD 64
+ N SF+ L TY S++ AC++ S+ G+++H H+L + D
Sbjct: 57 AQKNSSFKIRLRTYISLI---------------CACSSSRSLAQGRKIHDHILNSNCKYD 101
Query: 65 AFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEM 124
+ ++ MY KC +R+V D MP R++VS+ S+I+ +S+ EAI + +M
Sbjct: 102 TILNNHILSMYGKCGSLRDAREVFDFMPE--RNLVSYTSVITGYSQNGQGAEAIRLYLKM 159
Query: 125 WVLGLELSASTFVSVVSGCSFRQ----GISMHCCVYKLGLLNNEIPLANSVMSMYAKFGK 180
L F S++ C+ G +H V KL ++ I N++++MY +F +
Sbjct: 160 LQEDLVPDQFAFGSIIKACASSSDVGLGKQLHAQVIKLESSSHLIA-QNALIAMYVRFNQ 218
Query: 181 VNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSV-TPDLVVFLNLIL 239
+++A +F I ++SW++II G+ +G EA +M V P+ +F + +
Sbjct: 219 MSDASRVFYGIPMKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLK 278
Query: 240 GCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFL 299
C+ + +H L +KS L MY +CG L ARRVFD +
Sbjct: 279 ACSSLLRPDYGSQIHGLCIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQIERPDTAS 338
Query: 300 WTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIV 359
W +I G A GY EAV++F ++ + P+ +L + L A + +LS+G +I YI+
Sbjct: 339 WNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQIHSYII 398
Query: 360 LNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDK-DLAVWSAMINGYAIHGMGDQAL 418
G ++ V SL+ M++ C + +FE + D W+ ++ H + L
Sbjct: 399 KWGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNADSVSWNTILTACLQHEQPVEML 458
Query: 419 NLFYKMQHVEGLKPDAVVYTSILSAC 444
LF K+ V +PD + ++L C
Sbjct: 459 RLF-KLMLVSECEPDHITMGNLLRGC 483
Score = 120 bits (300), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 70/232 (30%), Positives = 123/232 (53%), Gaps = 2/232 (0%)
Query: 214 EAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLV 273
EAF + S L +++LI C+ +L +H +L S + L+N ++
Sbjct: 52 EAFDFAQ--KNSSFKIRLRTYISLICACSSSRSLAQGRKIHDHILNSNCKYDTILNNHIL 109
Query: 274 SMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEA 333
SMY KCG L AR VFD + E+++ +TS+I GY+Q G +EA+ L+ ++L+ + P++
Sbjct: 110 SMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQF 169
Query: 334 TLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERV 393
+ + ACA + GK++ ++ S+ Q +LI M+ + +++ A VF +
Sbjct: 170 AFGSIIKACASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGI 229
Query: 394 PDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACS 445
P KDL WS++I G++ G +AL+ +M P+ ++ S L ACS
Sbjct: 230 PMKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACS 281
>sp|Q9FWA6|PP207_ARATH Pentatricopeptide repeat-containing protein At3g02330
OS=Arabidopsis thaliana GN=PCMP-E90 PE=2 SV=2
Length = 903
Score = 347 bits (890), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 192/616 (31%), Positives = 325/616 (52%), Gaps = 28/616 (4%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+I N L + M + + + VL++CA ++ + G ++H+H LK
Sbjct: 252 IIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHALKSD 311
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F D V+T +DMY+KC + ++ + D R S+N++I+ +S+ +A+L+
Sbjct: 312 FAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQ--SYNAMITGYSQEEHGFKALLL 369
Query: 121 LKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGL---LNNEIPLANSVMSMYAK 177
+ GL + V C+ +G+S +Y L + L+ ++ +AN+ + MY K
Sbjct: 370 FHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGK 429
Query: 178 FGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNL 237
+ EA +FDE+ VSW II + G E L M R + PD F ++
Sbjct: 430 CQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSI 489
Query: 238 ILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS- 296
+ C G+L + +HS ++KSG + + L+ MY+KCG +E A ++ +++
Sbjct: 490 LKACTG-GSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRAN 548
Query: 297 -------------------VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLAT 337
W S+I GY +A LF R+++ + P++ T AT
Sbjct: 549 VSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYAT 608
Query: 338 TLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKD 397
L CA L S GK+I ++ L+S+ + ++L+ M+SKCG ++ ++ +FE+ +D
Sbjct: 609 VLDTCANLASAGLGKQIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDSRLMFEKSLRRD 668
Query: 398 LAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFF 457
W+AMI GYA HG G++A+ LF +M +E +KP+ V + SIL AC+H G++D GL +F
Sbjct: 669 FVTWNAMICGYAHHGKGEEAIQLFERMI-LENIKPNHVTFISILRACAHMGLIDKGLEYF 727
Query: 458 KSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKH-H 516
M+ ++G++P + HY +VD+LG++G+ AL+ I EMP E +W LL C H +
Sbjct: 728 YMMKRDYGLDPQLPHYSNMVDILGKSGKVKRALELIREMPFEADDVIWRTLLGVCTIHRN 787
Query: 517 NVELGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQV 576
NVE+ E A LL L+P + Y L++N++ AGMW++ + R M +L KEPG S V
Sbjct: 788 NVEVAEEATAALLRLDPQDSSAYTLLSNVYADAGMWEKVSDLRRNMRGFKLKKEPGCSWV 847
Query: 577 EIDGSVQVFVAGDRSH 592
E+ + VF+ GD++H
Sbjct: 848 ELKDELHVFLVGDKAH 863
Score = 191 bits (486), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 141/524 (26%), Positives = 253/524 (48%), Gaps = 58/524 (11%)
Query: 14 TLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLID 73
+ S ++ L ++ F V K CA ++ GK+ H+H++ GF+ FV L+
Sbjct: 32 SFSYFTDFLNQVNSVSTTNFSFVFKECAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQ 91
Query: 74 MYSKCSDFVSSRKVLDEMPVR-----------------------------LRSVVSWNSI 104
+Y+ DFVS+ V D+MP+R +R VVSWNS+
Sbjct: 92 VYTNSRDFVSASMVFDKMPLRDVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSM 151
Query: 105 ISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCSFRQ----GISMHCCVYKLGL 160
+S + + + ++I V +M G+E TF ++ CSF + G+ +H V ++G
Sbjct: 152 LSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGC 211
Query: 161 LNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCN 220
+ ++ A++++ MYAK + E+ +F I E + VSW+ II G V ++ A
Sbjct: 212 -DTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFK 270
Query: 221 QMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCG 280
+M++++ ++ +++ CA + L L +H+ LKS + + + + MY KC
Sbjct: 271 EMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCD 330
Query: 281 DLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLS 340
+++ A+ +FD + + +MI GY+Q + +A+ LF RL+ + + +E +L+
Sbjct: 331 NMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFR 390
Query: 341 ACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAV 400
ACA + LS+G +I + + L + V + I M+ KC + +A VF+ + +D
Sbjct: 391 ACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVS 450
Query: 401 WSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACS----------HSGMV 450
W+A+I + +G G + L LF M ++PD + SIL AC+ HS +V
Sbjct: 451 WNAIIAAHEQNGKGYETLFLFVSMLRSR-IEPDEFTFGSILKACTGGSLGYGMEIHSSIV 509
Query: 451 DDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIH 494
G M SN + S L+D+ + G + A K IH
Sbjct: 510 KSG------MASNSSVGCS------LIDMYSKCGMIEEAEK-IH 540
Score = 115 bits (288), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 80/347 (23%), Positives = 169/347 (48%), Gaps = 11/347 (3%)
Query: 169 NSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVT 228
N +++ Y+K + +A S F+ + +VSW +++ GY+ G ++ + M R +
Sbjct: 118 NKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIE 177
Query: 229 PDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRV 288
D F ++ C+ + + L + +H ++++ G + + + L+ MY K + RV
Sbjct: 178 FDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRV 237
Query: 289 FDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSL 348
F + EK+ W+++I G Q S A+ FK + K + +++ A+ L +CA L L
Sbjct: 238 FQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSEL 297
Query: 349 SKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGY 408
G ++ + + + ++ V+T+ + M++KC + A+ +F+ + + ++AMI GY
Sbjct: 298 RLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGY 357
Query: 409 AIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEP 468
+ G +AL LF+++ GL D + + + AC+ + +GL + I+
Sbjct: 358 SQEEHGFKALLLFHRLMS-SGLGFDEISLSGVFRACALVKGLSEGLQIY-----GLAIKS 411
Query: 469 SIEHYLCL----VDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSA 511
S+ +C+ +D+ G+ A + EM A W +++A
Sbjct: 412 SLSLDVCVANAAIDMYGKCQALAEAFRVFDEMR-RRDAVSWNAIIAA 457
>sp|Q9CAY1|PP223_ARATH Putative pentatricopeptide repeat-containing protein At3g11460
OS=Arabidopsis thaliana GN=PCMP-H52 PE=3 SV=1
Length = 623
Score = 346 bits (887), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 188/521 (36%), Positives = 293/521 (56%), Gaps = 16/521 (3%)
Query: 101 WNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCSFRQ----GISMHCCVY 156
WN + + L E+I + + M G A +F ++ C+ G +HC V
Sbjct: 21 WNVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVT 80
Query: 157 KLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVS--WTTIIGGYVNVGNVNE 214
K G E + +++SMY K G V +AR +F+E ++S +S + +I GY V +
Sbjct: 81 KGGC-ETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTD 139
Query: 215 AFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVS 274
A + +M+ V+ D V L L+ C L+L S+H +K G ++E + N ++
Sbjct: 140 AAYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFIT 199
Query: 275 MYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEAT 334
MY KCG +E RR+FD + K + W ++I GY+Q G + + L++++ + V P+ T
Sbjct: 200 MYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFT 259
Query: 335 LATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVP 394
L + LS+CA LG+ G E+ + + NG N V + I M+++CG + KA+ VF+ +P
Sbjct: 260 LVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVFDIMP 319
Query: 395 DKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGL 454
K L W+AMI Y +HGMG+ L LF M G++PD V+ +LSACSHSG+ D GL
Sbjct: 320 VKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIK-RGIRPDGAVFVMVLSACSHSGLTDKGL 378
Query: 455 SFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMK 514
F++M+ + +EP EHY CLVDLLGRAGR D A++ I MPVE VW LL AC
Sbjct: 379 ELFRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIESMPVEPDGAVWGALLGACKI 438
Query: 515 HHNVELGEYAAKNLLTLNPGSTGNYILMANLFTSA----GMWKEAATARGLMDDRRLTKE 570
H NV++ E A ++ P + G Y+LM+N+++ + G+W+ R +M +R K+
Sbjct: 439 HKNVDMAELAFAKVIEFEPNNIGYYVLMSNIYSDSKNQEGIWR----IRVMMRERAFRKK 494
Query: 571 PGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLKELHIKLLE 611
PG+S VE G V +F+AGDRSH + ++ + L EL ++E
Sbjct: 495 PGYSYVEHKGRVHLFLAGDRSHEQTEEVHRMLDELETSVME 535
Score = 231 bits (589), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 154/503 (30%), Positives = 252/503 (50%), Gaps = 25/503 (4%)
Query: 11 FEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTG 70
F E++S Y SML++G ++F+FP +LK+CA+++ G+++H HV K G + + FV T
Sbjct: 34 FSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVTKGGCETEPFVLTA 93
Query: 71 LIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLE 130
LI MY KC +RKV +E P + V +N++IS ++ +A + + M G+
Sbjct: 94 LISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTDAAYMFRRMKETGVS 153
Query: 131 LSASTFVSVVSGCSFRQ----GISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARS 186
+ + T + +V C+ + G S+H K G L++E+ + NS ++MY K G V R
Sbjct: 154 VDSVTMLGLVPLCTVPEYLWLGRSLHGQCVK-GGLDSEVAVLNSFITMYMKCGSVEAGRR 212
Query: 187 IFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGN 246
+FDE+ +++W +I GY G + L QM+ V PD ++++ CA +G
Sbjct: 213 LFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFTLVSVLSSCAHLGA 272
Query: 247 LFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGG 306
+ + L+ +G+ + N +SMY +CG+L AR VFD + KS+ WT+MIG
Sbjct: 273 KKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVFDIMPVKSLVSWTAMIGC 332
Query: 307 YAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEI-----EEYIVLN 361
Y G + LF ++K +RP+ A LSAC+ G KG E+ EY
Sbjct: 333 YGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLELFRAMKREY---- 388
Query: 362 GLESNRQVQTSLIHMFSKCGRINKAKEVFERVP-DKDLAVWSAMINGYAIHGMGDQALNL 420
LE + + L+ + + GR+++A E E +P + D AVW A++ IH D A
Sbjct: 389 KLEPGPEHYSCLVDLLGRAGRLDEAMEFIESMPVEPDGAVWGALLGACKIHKNVDMAELA 448
Query: 421 FYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSM--QSNFGIEPSIEHYLCLVD 478
F K+ E P+ + Y ++S +G+ + M + F +P + V+
Sbjct: 449 FAKVIEFE---PNNIGYYVLMSNIYSDSKNQEGIWRIRVMMRERAFRKKPGYSY----VE 501
Query: 479 LLGRAGRFDLALKTIHEMPVEVQ 501
GR F LA HE EV
Sbjct: 502 HKGRVHLF-LAGDRSHEQTEEVH 523
Score = 117 bits (294), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 85/312 (27%), Positives = 152/312 (48%), Gaps = 9/312 (2%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+I T N + + M +TGV +S T ++ C +W G+ +H +K G
Sbjct: 127 LISGYTANSKVTDAAYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGG 186
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+ V I MY KC + R++ DEMPV + +++WN++IS +S+ L + + +
Sbjct: 187 LDSEVAVLNSFITMYMKCGSVEAGRRLFDEMPV--KGLITWNAVISGYSQNGLAYDVLEL 244
Query: 121 LKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGLLNNEIP---LANSVMSMYAK 177
++M G+ T VSV+S C+ + V KL N +P ++N+ +SMYA+
Sbjct: 245 YEQMKSSGVCPDPFTLVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYAR 304
Query: 178 FGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNL 237
G + +AR++FD + S+VSWT +IG Y G L + M + + PD VF+ +
Sbjct: 305 CGNLAKARAVFDIMPVKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMV 364
Query: 238 ILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNL--LVSMYTKCGDLELARRVFDAV-LE 294
+ C+ G L + +K Y E ++ LV + + G L+ A +++ +E
Sbjct: 365 LSACSHSGLTDKGLELFR-AMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIESMPVE 423
Query: 295 KSVFLWTSMIGG 306
+W +++G
Sbjct: 424 PDGAVWGALLGA 435
>sp|Q9SS83|PP220_ARATH Pentatricopeptide repeat-containing protein At3g09040, mitochondrial
OS=Arabidopsis thaliana GN=PCMP-E88 PE=2 SV=1
Length = 1028
Score = 342 bits (878), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 195/628 (31%), Positives = 335/628 (53%), Gaps = 13/628 (2%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MIR +NG + + + M +G + + FTF +L CA + + G + HS ++K
Sbjct: 399 MIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKK 458
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
++ FV L+DMY+KC +R++ + M R V+WN+II ++ + EA +
Sbjct: 459 LAKNLFVGNALVDMYAKCGALEDARQIFERMCDR--DNVTWNTIIGSYVQDENESEAFDL 516
Query: 121 LKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
K M + G+ + S + C+ QG +HC K GL + ++ +S++ MY+
Sbjct: 517 FKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGL-DRDLHTGSSLIDMYS 575
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K G + +AR +F + E S+VS +I GY + N+ EA L +M V P + F
Sbjct: 576 KCGIIKDARKVFSSLPEWSVVSMNALIAGY-SQNNLEEAVVLFQEMLTRGVNPSEITFAT 634
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNE-DPLDNLLVSMYTKCGDLELARRVFDAVLE- 294
++ C + +L L H + K G+++E + L L+ MY + A +F +
Sbjct: 635 IVEACHKPESLTLGTQFHGQITKRGFSSEGEYLGISLLGMYMNSRGMTEACALFSELSSP 694
Query: 295 KSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEI 354
KS+ LWT M+ G++Q G+ EA+ +K + V P++AT T L C+ L SL +G+ I
Sbjct: 695 KSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREGRAI 754
Query: 355 EEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDK-DLAVWSAMINGYAIHGM 413
I + + +LI M++KCG + + +VF+ + + ++ W+++INGYA +G
Sbjct: 755 HSLIFHLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLINGYAKNGY 814
Query: 414 GDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHY 473
+ AL +F M+ + PD + + +L+ACSH+G V DG F+ M +GIE ++H
Sbjct: 815 AEDALKIFDSMRQSH-IMPDEITFLGVLTACSHAGKVSDGRKIFEMMIGQYGIEARVDHV 873
Query: 474 LCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNP 533
C+VDLLGR G A I ++ A++W+ LL AC H + GE +A+ L+ L P
Sbjct: 874 ACMVDLLGRWGYLQEADDFIEAQNLKPDARLWSSLLGACRIHGDDIRGEISAEKLIELEP 933
Query: 534 GSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHH 593
++ Y+L++N++ S G W++A R +M DR + K PG+S ++++ +F AGD+SH
Sbjct: 934 QNSSAYVLLSNIYASQGCWEKANALRKVMRDRGVKKVPGYSWIDVEQRTHIFAAGDKSHS 993
Query: 594 LSVDIRKTLKELHIKLLEAGYIAEADIV 621
I L++L+ L++ + DIV
Sbjct: 994 EIGKIEMFLEDLY-DLMKDDAVVNPDIV 1020
Score = 201 bits (511), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 129/487 (26%), Positives = 228/487 (46%), Gaps = 40/487 (8%)
Query: 13 ETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLI 72
+ L ++ S+ + + N FTF +VL CA ++ G+++H ++K+G +++++ L+
Sbjct: 143 KVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERNSYCGGALV 202
Query: 73 DMYSKCSDFVSSRKVLDEM--PVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLE 130
DMY+KC +R+V + + P + V W + S + +A L +EA+LV + M G
Sbjct: 203 DMYAKCDRISDARRVFEWIVDP----NTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHR 258
Query: 131 LSASTFVSVVSGCSFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDE 190
FV+V+ + Y + GK+ +AR +F E
Sbjct: 259 PDHLAFVTVI--------------------------------NTYIRLGKLKDARLLFGE 286
Query: 191 IGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLA 250
+ +V+W +I G+ G A MR+ SV +++ V NL L
Sbjct: 287 MSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLG 346
Query: 251 LSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQL 310
L +H+ +K G + + + LVSMY+KC +E A +VF+A+ EK+ W +MI GYA
Sbjct: 347 LVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHN 406
Query: 311 GYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQ 370
G + + LF + + ++ T + LS CA L G + I+ L N V
Sbjct: 407 GESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVG 466
Query: 371 TSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGL 430
+L+ M++KCG + A+++FER+ D+D W+ +I Y +A +LF +M ++ G+
Sbjct: 467 NALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRM-NLCGI 525
Query: 431 KPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLAL 490
D S L AC+H + G + G++ + L+D+ + G A
Sbjct: 526 VSDGACLASTLKACTHVHGLYQGKQ-VHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDAR 584
Query: 491 KTIHEMP 497
K +P
Sbjct: 585 KVFSSLP 591
Score = 182 bits (462), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 132/462 (28%), Positives = 224/462 (48%), Gaps = 40/462 (8%)
Query: 18 YSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVH---------------SHVLKVGFQ 62
+ SM++ G+ NS+ ++ A + I D +RV S +K G
Sbjct: 183 HCSMIKMGLERNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLP 242
Query: 63 QDAFVQ----------------TGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIIS 106
++A + +I+ Y + +R + EM VV+WN +IS
Sbjct: 243 EEAVLVFERMRDEGHRPDHLAFVTVINTYIRLGKLKDARLLFGEMSSP--DVVAWNVMIS 300
Query: 107 AHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSG----CSFRQGISMHCCVYKLGLLN 162
H + AI M ++ + ST SV+S + G+ +H KLGL +
Sbjct: 301 GHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLAS 360
Query: 163 NEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQM 222
N I + +S++SMY+K K+ A +F+ + E + V W +I GY + G ++ L M
Sbjct: 361 N-IYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDM 419
Query: 223 RRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDL 282
+ D F +L+ CA +L + HS+++K + N LV MY KCG L
Sbjct: 420 KSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGAL 479
Query: 283 ELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSAC 342
E AR++F+ + ++ W ++IG Y Q SEA +LFKR+ + + A LA+TL AC
Sbjct: 480 EDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKAC 539
Query: 343 AELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWS 402
+ L +GK++ V GL+ + +SLI M+SKCG I A++VF +P+ + +
Sbjct: 540 THVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMN 599
Query: 403 AMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSAC 444
A+I GY+ + + ++A+ LF +M G+ P + + +I+ AC
Sbjct: 600 ALIAGYSQNNL-EEAVVLFQEML-TRGVNPSEITFATIVEAC 639
Score = 168 bits (426), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 126/478 (26%), Positives = 219/478 (45%), Gaps = 56/478 (11%)
Query: 49 GKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAH 108
GK VHS L +G + + ++D+Y+KC+ + K D + + V +WNS++S +
Sbjct: 79 GKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFLE---KDVTAWNSMLSMY 135
Query: 109 SRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCSFRQ----GISMHCCVYKLGLLNNE 164
S + + ++ + + TF V+S C+ G +HC + K+GL N
Sbjct: 136 SSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERNS 195
Query: 165 IPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRR 224
+++ MYAK ++++AR +F+ I + + V WT + GYV G EA + +MR
Sbjct: 196 Y-CGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRD 254
Query: 225 MSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLEL 284
PD + F+ +I + Y + G L+
Sbjct: 255 EGHRPDHLAFVTVI-----------------------------------NTYIRLGKLKD 279
Query: 285 ARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAE 344
AR +F + V W MI G+ + G + A+ F + K+SV+ +TL + LSA
Sbjct: 280 ARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGI 339
Query: 345 LGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAM 404
+ +L G + + GL SN V +SL+ M+SKC ++ A +VFE + +K+ W+AM
Sbjct: 340 VANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAM 399
Query: 405 INGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFF-----KS 459
I GYA +G + + LF M+ G D +TS+LS C+ S ++ G F K
Sbjct: 400 IRGYAHNGESHKVMELFMDMKS-SGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKK 458
Query: 460 MQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHN 517
+ N + + LVD+ + G + A + I E + W ++ + ++ N
Sbjct: 459 LAKNLFVGNA------LVDMYAKCGALEDA-RQIFERMCDRDNVTWNTIIGSYVQDEN 509
Score = 128 bits (321), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 79/278 (28%), Positives = 141/278 (50%), Gaps = 10/278 (3%)
Query: 247 LFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGG 306
L + ++HS L G ++E L N +V +Y KC + A + FD LEK V W SM+
Sbjct: 76 LRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFD-FLEKDVTAWNSMLSM 134
Query: 307 YAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESN 366
Y+ +G P + + F L + + PN+ T + LS CA ++ G++I ++ GLE N
Sbjct: 135 YSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERN 194
Query: 367 RQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQH 426
+L+ M++KC RI+ A+ VFE + D + W+ + +GY G+ ++A+ +F +M+
Sbjct: 195 SYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRD 254
Query: 427 VEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRF 486
EG +PD + + ++++ G + D F M S P + + ++ G+ G
Sbjct: 255 -EGHRPDHLAFVTVINTYIRLGKLKDARLLFGEMSS-----PDVVAWNVMISGHGKRGCE 308
Query: 487 DLALKTIHEM---PVEVQAQVWAPLLSACMKHHNVELG 521
+A++ M V+ +LSA N++LG
Sbjct: 309 TVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLG 346
Score = 111 bits (277), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 97/426 (22%), Positives = 167/426 (39%), Gaps = 93/426 (21%)
Query: 29 NSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVL 88
+SF+F L ++ G+R++ HVL D Q L +C F SRKV
Sbjct: 15 DSFSFVRRLSYSPDL-----GRRIYGHVLP---SHDQIHQRLLEICLGQCKLF-KSRKVF 65
Query: 89 DEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCSFRQG 148
DEMP RL + R G
Sbjct: 66 DEMPQRL----------------------------------------------ALALRIG 79
Query: 149 ISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVN 208
++H LG+ ++E L N+++ +YAK +V+ A FD + E + +W +++ Y +
Sbjct: 80 KAVHSKSLILGI-DSEGRLGNAIVDLYAKCAQVSYAEKQFDFL-EKDVTAWNSMLSMYSS 137
Query: 209 VGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPL 268
+G + + + P+ F ++ CA+ N+ +H ++K G
Sbjct: 138 IGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERNSYC 197
Query: 269 DNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSV 328
LV MY KC + ARRVF+ +++ + WT + GY + G P EAV +F+R+
Sbjct: 198 GGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGH 257
Query: 329 RPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKE 388
RP+ T +I+ + + G++ A+
Sbjct: 258 RPDHLAFVT-----------------------------------VINTYIRLGKLKDARL 282
Query: 389 VFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSG 448
+F + D+ W+ MI+G+ G A+ F+ M+ +K S+LSA
Sbjct: 283 LFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRK-SSVKSTRSTLGSVLSAIGIVA 341
Query: 449 MVDDGL 454
+D GL
Sbjct: 342 NLDLGL 347
>sp|Q9M1V3|PP296_ARATH Pentatricopeptide repeat-containing protein At3g63370
OS=Arabidopsis thaliana GN=PCMP-H83 PE=2 SV=2
Length = 960
Score = 342 bits (876), Expect = 7e-93, Method: Compositional matrix adjust.
Identities = 206/627 (32%), Positives = 336/627 (53%), Gaps = 11/627 (1%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
++ + + +G ETL + M TG NS+T L AC + GK +H+ VLK
Sbjct: 255 ILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSS 314
Query: 61 -FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAIL 119
+ +V LI MY++C + ++L +M VV+WNS+I + + + EA+
Sbjct: 315 THSSELYVCNALIAMYTRCGKMPQAERILRQM--NNADVVTWNSLIKGYVQNLMYKEALE 372
Query: 120 VLKEMWVLGLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMY 175
+M G + + S+++ + G+ +H V K G +N + + N+++ MY
Sbjct: 373 FFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSN-LQVGNTLIDMY 431
Query: 176 AKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFL 235
+K F + + ++SWTT+I GY EA L + + + D ++
Sbjct: 432 SKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILG 491
Query: 236 NLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEK 295
+++ + + ++ + +H +L+ G + + N LV +Y KC ++ A RVF+++ K
Sbjct: 492 SILRASSVLKSMLIVKEIHCHILRKGLLD-TVIQNELVDVYGKCRNMGYATRVFESIKGK 550
Query: 296 SVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIE 355
V WTSMI A G SEAV LF+R+++T + + L LSA A L +L+KG+EI
Sbjct: 551 DVVSWTSMISSSALNGNESEAVELFRRMVETGLSADSVALLCILSAAASLSALNKGREIH 610
Query: 356 EYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGD 415
Y++ G + +++ M++ CG + AK VF+R+ K L +++MIN Y +HG G
Sbjct: 611 CYLLRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGK 670
Query: 416 QALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLC 475
A+ LF KM+H E + PD + + ++L ACSH+G++D+G F K M+ + +EP EHY+C
Sbjct: 671 AAVELFDKMRH-ENVSPDHISFLALLYACSHAGLLDEGRGFLKIMEHEYELEPWPEHYVC 729
Query: 476 LVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGS 535
LVD+LGRA A + + M E A+VW LL+AC H E+GE AA+ LL L P +
Sbjct: 730 LVDMLGRANCVVEAFEFVKMMKTEPTAEVWCALLAACRSHSEKEIGEIAAQRLLELEPKN 789
Query: 536 TGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLS 595
GN +L++N+F G W + R M + K PG S +E+DG V F A D+SH S
Sbjct: 790 PGNLVLVSNVFAEQGRWNDVEKVRAKMKASGMEKHPGCSWIEMDGKVHKFTARDKSHPES 849
Query: 596 VDIRKTLKELHIKL-LEAGYIAEADIV 621
+I + L E+ KL E GY+A+ V
Sbjct: 850 KEIYEKLSEVTRKLEREVGYVADTKFV 876
Score = 214 bits (546), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 145/497 (29%), Positives = 253/497 (50%), Gaps = 13/497 (2%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI +NG L+ Y +M GV +FP +LKACA + I G +HS ++K+G
Sbjct: 153 MIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSGSELHSLLVKLG 212
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+ F+ L+ MY+K D ++R++ D + +V+ WNSI+S++S + + E + +
Sbjct: 213 YHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVL-WNSILSSYSTSGKSLETLEL 271
Query: 121 LKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
+EM + G ++ T VS ++ C + G +H V K ++E+ + N++++MY
Sbjct: 272 FREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYT 331
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
+ GK+ +A I ++ +V+W ++I GYV EA + M D V +
Sbjct: 332 RCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTS 391
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
+I ++ NL + +H+ ++K G+++ + N L+ MY+KC R F + +K
Sbjct: 392 IIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKD 451
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEE 356
+ WT++I GYAQ EA+ LF+ + K + +E L + L A + L S+ KEI
Sbjct: 452 LISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHC 511
Query: 357 YIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQ 416
+I+ GL + +Q L+ ++ KC + A VFE + KD+ W++MI+ A++G +
Sbjct: 512 HILRKGL-LDTVIQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESE 570
Query: 417 ALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKS-MQSNFGIEPSI----- 470
A+ LF +M GL D+V ILSA + ++ G ++ F +E SI
Sbjct: 571 AVELFRRMVET-GLSADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVAVV 629
Query: 471 EHYLCLVDLLGRAGRFD 487
+ Y C DL FD
Sbjct: 630 DMYACCGDLQSAKAVFD 646
Score = 190 bits (483), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 126/422 (29%), Positives = 210/422 (49%), Gaps = 13/422 (3%)
Query: 32 TFPLVLKACANINSIWDGKRVHSHVLKV--GFQQDAFVQTGLIDMYSKCSDFVSSRKVLD 89
F VL+ C ++ G+++HS + K F+ D F+ L+ MY KC + KV D
Sbjct: 82 AFAYVLELCGKRRAVSQGRQLHSRIFKTFPSFELD-FLAGKLVFMYGKCGSLDDAEKVFD 140
Query: 90 EMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCS----F 145
EMP R+ +WN++I A+ A+ + M V G+ L S+F +++ C+
Sbjct: 141 EMPD--RTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDI 198
Query: 146 RQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGET-SIVSWTTIIG 204
R G +H + KLG + + N+++SMYAK ++ AR +FD E V W +I+
Sbjct: 199 RSGSELHSLLVKLGYHSTGF-IVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILS 257
Query: 205 GYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSG-YN 263
Y G E L +M P+ ++ + C L +H+ +LKS ++
Sbjct: 258 SYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHS 317
Query: 264 NEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRL 323
+E + N L++MYT+CG + A R+ + V W S+I GY Q EA+ F +
Sbjct: 318 SELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDM 377
Query: 324 LKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRI 383
+ + +E ++ + ++A L +L G E+ Y++ +G +SN QV +LI M+SKC
Sbjct: 378 IAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLT 437
Query: 384 NKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSA 443
F R+ DKDL W+ +I GYA + +AL LF + + ++ D ++ SIL A
Sbjct: 438 CYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAK-KRMEIDEMILGSILRA 496
Query: 444 CS 445
S
Sbjct: 497 SS 498
>sp|Q9C507|PP111_ARATH Putative pentatricopeptide repeat-containing protein At1g69350,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E66 PE=3
SV=1
Length = 787
Score = 340 bits (872), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 192/610 (31%), Positives = 334/610 (54%), Gaps = 10/610 (1%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
++ + NG + L + M+ GV ++ T V++ CA + + + VH + +
Sbjct: 173 LVSSCLENGEVVKALRMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQITRKM 232
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F D + L+ MYSKC D +SS ++ ++ + ++ VSW ++IS+++R +++A+
Sbjct: 233 FDLDETLCNSLLTMYSKCGDLLSSERIFEK--IAKKNAVSWTAMISSYNRGEFSEKALRS 290
Query: 121 LKEMWVLGLELSASTFVSVVSGCSF----RQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
EM G+E + T SV+S C R+G S+H + L N L+ +++ +YA
Sbjct: 291 FSEMIKSGIEPNLVTLYSVLSSCGLIGLIREGKSVHGFAVRRELDPNYESLSLALVELYA 350
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
+ GK+++ ++ + + +IV+W ++I Y + G V +A GL QM + PD +
Sbjct: 351 ECGKLSDCETVLRVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLAS 410
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
I C G + L +H ++++ ++E + N L+ MY+K G ++ A VF+ + +S
Sbjct: 411 SISACENAGLVPLGKQIHGHVIRTDVSDE-FVQNSLIDMYSKSGSVDSASTVFNQIKHRS 469
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEE 356
V W SM+ G++Q G EA++LF + + + NE T + AC+ +GSL KGK +
Sbjct: 470 VVTWNSMLCGFSQNGNSVEAISLFDYMYHSYLEMNEVTFLAVIQACSSIGSLEKGKWVHH 529
Query: 357 YIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQ 416
++++GL+ + T+LI M++KCG +N A+ VF + + + WS+MIN Y +HG
Sbjct: 530 KLIISGLK-DLFTDTALIDMYAKCGDLNAAETVFRAMSSRSIVSWSSMINAYGMHGRIGS 588
Query: 417 ALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCL 476
A++ F +M G KP+ VV+ ++LSAC HSG V++G +F M+S FG+ P+ EH+ C
Sbjct: 589 AISTFNQMVE-SGTKPNEVVFMNVLSACGHSGSVEEGKYYFNLMKS-FGVSPNSEHFACF 646
Query: 477 VDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGST 536
+DLL R+G A +TI EMP A VW L++ C H +++ + +L + T
Sbjct: 647 IDLLSRSGDLKEAYRTIKEMPFLADASVWGSLVNGCRIHQKMDIIKAIKNDLSDIVTDDT 706
Query: 537 GNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSV 596
G Y L++N++ G W+E R M L K PG+S +EID V F AG+ + +
Sbjct: 707 GYYTLLSNIYAEEGEWEEFRRLRSAMKSSNLKKVPGYSAIEIDQKVFRFGAGEENRIQTD 766
Query: 597 DIRKTLKELH 606
+I + L L
Sbjct: 767 EIYRFLGNLQ 776
Score = 220 bits (561), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 177/645 (27%), Positives = 321/645 (49%), Gaps = 82/645 (12%)
Query: 11 FEETLSTYSSMLQTGVHGNSFTFPLVLKACANINS-IWDGKRVHSHVLKVGFQQDAFVQT 69
+ + Y ++ + F FP VL+ACA + G +VH ++K G DA ++T
Sbjct: 81 LDAAIDLYHRLVSETTQISKFVFPSVLRACAGSREHLSVGGKVHGRIIKGGVDDDAVIET 140
Query: 70 GLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLND----EAILVLKEMW 125
L+ MY + + + KV D MPV R +V+W++++S +CL + +A+ + K M
Sbjct: 141 SLLCMYGQTGNLSDAEKVFDGMPV--RDLVAWSTLVS----SCLENGEVVKALRMFKCMV 194
Query: 126 VLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKV 181
G+E A T +SVV GC+ R S+H + + + + + L NS+++MY+K G +
Sbjct: 195 DDGVEPDAVTMISVVEGCAELGCLRIARSVHGQITR-KMFDLDETLCNSLLTMYSKCGDL 253
Query: 182 NEARSIFDEIGETSIVSWTTIIGGYVNVGNVNE-AFGLCNQMRRMSVTPDLVVFLNLILG 240
+ IF++I + + VSWT +I Y N G +E A ++M + + P+LV +++
Sbjct: 254 LSSERIFEKIAKKNAVSWTAMISSY-NRGEFSEKALRSFSEMIKSGIEPNLVTLYSVLSS 312
Query: 241 CAQVGNLFLALSMHSLLLKSGYN-NEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFL 299
C +G + S+H ++ + N + L LV +Y +CG L V V ++++
Sbjct: 313 CGLIGLIREGKSVHGFAVRRELDPNYESLSLALVELYAECGKLSDCETVLRVVSDRNIVA 372
Query: 300 WTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIV 359
W S+I YA G +A+ LF++++ ++P+ TLA+++SAC G + GK+I +++
Sbjct: 373 WNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISACENAGLVPLGKQIHGHVI 432
Query: 360 LNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALN 419
+ S+ VQ SLI M+SK G ++ A VF ++ + + W++M+ G++ +G +A++
Sbjct: 433 RTDV-SDEFVQNSLIDMYSKSGSVDSASTVFNQIKHRSVVTWNSMLCGFSQNGNSVEAIS 491
Query: 420 LFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDG--------LSFFKSMQSNFGIEPSIE 471
LF M H L+ + V + +++ ACS G ++ G +S K + ++ + I+
Sbjct: 492 LFDYMYH-SYLEMNEVTFLAVIQACSSIGSLEKGKWVHHKLIISGLKDLFTDTAL---ID 547
Query: 472 HY------------------------LCLVDLLGRAGRFDLALKTIHEM------PVEVQ 501
Y +++ G GR A+ T ++M P EV
Sbjct: 548 MYAKCGDLNAAETVFRAMSSRSIVSWSSMINAYGMHGRIGSAISTFNQMVESGTKPNEV- 606
Query: 502 AQVWAPLLSACMKHHNVELGEYAAKNLLT---LNPGSTGNYILMANLFTSAGMWKEAATA 558
V+ +LSAC +VE G+Y NL+ ++P S ++ +L + +G KEA
Sbjct: 607 --VFMNVLSACGHSGSVEEGKYYF-NLMKSFGVSPNSE-HFACFIDLLSRSGDLKEAY-- 660
Query: 559 RGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTLK 603
R + + P + + GS+ V G R H +DI K +K
Sbjct: 661 ------RTIKEMPFLADASVWGSL---VNGCRIHQ-KMDIIKAIK 695
Score = 196 bits (497), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 133/510 (26%), Positives = 264/510 (51%), Gaps = 22/510 (4%)
Query: 34 PLVLKACANINSIWDGKRVHSHVLKVG-FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMP 92
PL ++C+++ + ++H+H+L G ++D T LI+ Y+ SSR V + P
Sbjct: 6 PL-FRSCSSLRLV---SQLHAHLLVTGRLRRDPLPVTKLIESYAFMGSPDSSRLVFEAFP 61
Query: 93 VRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCSFRQ----- 147
+ +I + L D AI + + ++S F SV+ C+ +
Sbjct: 62 --YPDSFMYGVLIKCNVWCHLLDAAIDLYHRLVSETTQISKFVFPSVLRACAGSREHLSV 119
Query: 148 GISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYV 207
G +H + K G+ +++ + S++ MY + G +++A +FD + +V+W+T++ +
Sbjct: 120 GGKVHGRIIKGGV-DDDAVIETSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCL 178
Query: 208 NVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDP 267
G V +A + M V PD V ++++ GCA++G L +A S+H + + ++ ++
Sbjct: 179 ENGEVVKALRMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDLDET 238
Query: 268 LDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTS 327
L N L++MY+KCGDL + R+F+ + +K+ WT+MI Y + + +A+ F ++K+
Sbjct: 239 LCNSLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMIKSG 298
Query: 328 VRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQ-VQTSLIHMFSKCGRINKA 386
+ PN TL + LS+C +G + +GK + + V L+ N + + +L+ ++++CG+++
Sbjct: 299 IEPNLVTLYSVLSSCGLIGLIREGKSVHGFAVRRELDPNYESLSLALVELYAECGKLSDC 358
Query: 387 KEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSH 446
+ V V D+++ W+++I+ YA GM QAL LF +M + +KPDA S +SAC +
Sbjct: 359 ETVLRVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQMV-TQRIKPDAFTLASSISACEN 417
Query: 447 SGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWA 506
+G+V G + + +++ L+D+ ++G D A T+ W
Sbjct: 418 AGLVPLGKQIHGHVIRTDVSDEFVQN--SLIDMYSKSGSVDSA-STVFNQIKHRSVVTWN 474
Query: 507 PLLSACMKHHN----VELGEYAAKNLLTLN 532
+L ++ N + L +Y + L +N
Sbjct: 475 SMLCGFSQNGNSVEAISLFDYMYHSYLEMN 504
>sp|Q9SS60|PP210_ARATH Pentatricopeptide repeat-containing protein At3g03580
OS=Arabidopsis thaliana GN=PCMP-H23 PE=2 SV=1
Length = 882
Score = 340 bits (872), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 199/620 (32%), Positives = 335/620 (54%), Gaps = 7/620 (1%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+I +++G +EE L Y + + + +SFT VL A N+ + G+ +H LK G
Sbjct: 178 LISGYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSG 237
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
V GL+ MY K +R+V DEM VR VS+N++I + + + +E++ +
Sbjct: 238 VNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVR--DSVSYNTMICGYLKLEMVEESVRM 295
Query: 121 LKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGLLNN---EIPLANSVMSMYAK 177
E + + T SV+ C + +S+ +Y L E + N ++ +YAK
Sbjct: 296 FLEN-LDQFKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAK 354
Query: 178 FGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNL 237
G + AR +F+ + VSW +II GY+ G++ EA L M M D + +L L
Sbjct: 355 CGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLML 414
Query: 238 ILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSV 297
I ++ +L +HS +KSG + + N L+ MY KCG++ + ++F ++
Sbjct: 415 ISVSTRLADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDT 474
Query: 298 FLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEY 357
W ++I + G + + + ++ K+ V P+ AT TL CA L + GKEI
Sbjct: 475 VTWNTVISACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCC 534
Query: 358 IVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQA 417
++ G ES Q+ +LI M+SKCG + + VFER+ +D+ W+ MI Y ++G G++A
Sbjct: 535 LLRFGYESELQIGNALIEMYSKCGCLENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEKA 594
Query: 418 LNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLV 477
L F M+ G+ PD+VV+ +I+ ACSHSG+VD+GL+ F+ M++++ I+P IEHY C+V
Sbjct: 595 LETFADMEK-SGIVPDSVVFIAIIYACSHSGLVDEGLACFEKMKTHYKIDPMIEHYACVV 653
Query: 478 DLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTG 537
DLL R+ + A + I MP++ A +WA +L AC ++E E ++ ++ LNP G
Sbjct: 654 DLLSRSQKISKAEEFIQAMPIKPDASIWASVLRACRTSGDMETAERVSRRIIELNPDDPG 713
Query: 538 NYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVD 597
IL +N + + W + + R + D+ +TK PG+S +E+ +V VF +GD S S
Sbjct: 714 YSILASNAYAALRKWDKVSLIRKSLKDKHITKNPGYSWIEVGKNVHVFSSGDDSAPQSEA 773
Query: 598 IRKTLKELHIKLLEAGYIAE 617
I K+L+ L+ + + GYI +
Sbjct: 774 IYKSLEILYSLMAKEGYIPD 793
Score = 215 bits (547), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 137/453 (30%), Positives = 235/453 (51%), Gaps = 17/453 (3%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+IR + NG F E L Y + ++ V + +TFP V+KACA + G V+ +L +G
Sbjct: 77 IIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQILDMG 136
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F+ D FV L+DMYS+ +R+V DEMPV R +VSWNS+IS +S +EA+ +
Sbjct: 137 FESDLFVGNALVDMYSRMGLLTRARQVFDEMPV--RDLVSWNSLISGYSSHGYYEEALEI 194
Query: 121 ---LKEMWVLGLELSASTFVSVVSG-CSFRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
LK W++ + S+ + +QG +H K G+ + + + N +++MY
Sbjct: 195 YHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVV-VNNGLVAMYL 253
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGL----CNQMRRMSVTPDLV 232
KF + +AR +FDE+ VS+ T+I GY+ + V E+ + +Q + PDL+
Sbjct: 254 KFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLENLDQFK-----PDLL 308
Query: 233 VFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAV 292
+++ C + +L LA +++ +LK+G+ E + N+L+ +Y KCGD+ AR VF+++
Sbjct: 309 TVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSM 368
Query: 293 LEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGK 352
K W S+I GY Q G EA+ LFK ++ + + T +S L L GK
Sbjct: 369 ECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGK 428
Query: 353 EIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHG 412
+ + +G+ + V +LI M++KCG + + ++F + D W+ +I+ G
Sbjct: 429 GLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFG 488
Query: 413 MGDQALNLFYKMQHVEGLKPDAVVYTSILSACS 445
L + +M+ E + PD + L C+
Sbjct: 489 DFATGLQVTTQMRKSE-VVPDMATFLVTLPMCA 520
Score = 172 bits (435), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 142/498 (28%), Positives = 244/498 (48%), Gaps = 22/498 (4%)
Query: 34 PLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPV 93
P + +A ++ +++ + +R+H+ V+ +G F LID YS + SS V +
Sbjct: 8 PFISRALSSSSNLNELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVS- 66
Query: 94 RLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCSFRQGISMHC 153
++V WNSII A S+ L EA+ ++ + TF SV+ C+ M
Sbjct: 67 PAKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGD 126
Query: 154 CVYKLGL---LNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVG 210
VY+ L +++ + N+++ MY++ G + AR +FDE+ +VSW ++I GY + G
Sbjct: 127 LVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHG 186
Query: 211 NVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFL---ALSMHSLLLKSGYNNEDP 267
EA + ++++ + PD +++ GNL + +H LKSG N+
Sbjct: 187 YYEEALEIYHELKNSWIVPDSFTVSSVL---PAFGNLLVVKQGQGLHGFALKSGVNSVVV 243
Query: 268 LDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTS 327
++N LV+MY K ARRVFD + + + +MI GY +L E+V +F L
Sbjct: 244 VNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLENLD-Q 302
Query: 328 VRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAK 387
+P+ T+++ L AC L LS K I Y++ G V+ LI +++KCG + A+
Sbjct: 303 FKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITAR 362
Query: 388 EVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHS 447
+VF + KD W+++I+GY G +A+ LF KM + + D + Y ++S +
Sbjct: 363 DVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLF-KMMMIMEEQADHITYLMLISVSTR- 420
Query: 448 GMVDDGLSFFKSMQSNFGIEPSIEHYL----CLVDLLGRAGRFDLALKTIHEMPVEVQAQ 503
+ D L F K + SN GI+ I L L+D+ + G +LK M
Sbjct: 421 -LAD--LKFGKGLHSN-GIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTG-DTV 475
Query: 504 VWAPLLSACMKHHNVELG 521
W ++SAC++ + G
Sbjct: 476 TWNTVISACVRFGDFATG 493
>sp|Q9LJR6|PP253_ARATH Putative pentatricopeptide repeat-containing protein At3g25060,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E96 PE=3
SV=1
Length = 601
Score = 339 bits (870), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 186/564 (32%), Positives = 312/564 (55%), Gaps = 10/564 (1%)
Query: 51 RVHSHVLKVG-FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHS 109
++H+ V+ G + + LI + + +RKV DE+P R SV +NS+I +S
Sbjct: 35 QIHAFVISTGNLLNGSSISRDLIASCGRIGEISYARKVFDELPQRGVSV--YNSMIVVYS 92
Query: 110 RACLNDEAILVLKEMWVLGLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEI 165
R DE + + +M ++ +STF + C +G ++ C G N++
Sbjct: 93 RGKNPDEVLRLYDQMIAEKIQPDSSTFTMTIKACLSGLVLEKGEAVWCKAVDFGY-KNDV 151
Query: 166 PLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRM 225
+ +SV+++Y K GK++EA +F ++ + ++ WTT++ G+ G +A +M+
Sbjct: 152 FVCSSVLNLYMKCGKMDEAEVLFGKMAKRDVICWTTMVTGFAQAGKSLKAVEFYREMQNE 211
Query: 226 SVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELA 285
D VV L L+ +G+ + S+H L ++G ++ LV MY K G +E+A
Sbjct: 212 GFGRDRVVMLGLLQASGDLGDTKMGRSVHGYLYRTGLPMNVVVETSLVDMYAKVGFIEVA 271
Query: 286 RRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAEL 345
RVF ++ K+ W S+I G+AQ G ++A + +P+ TL L AC+++
Sbjct: 272 SRVFSRMMFKTAVSWGSLISGFAQNGLANKAFEAVVEMQSLGFQPDLVTLVGVLVACSQV 331
Query: 346 GSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMI 405
GSL G+ + YI+ + +R T+L+ M+SKCG ++ ++E+FE V KDL W+ MI
Sbjct: 332 GSLKTGRLVHCYILKRHV-LDRVTATALMDMYSKCGALSSSREIFEHVGRKDLVCWNTMI 390
Query: 406 NGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFG 465
+ Y IHG G + ++LF KM ++PD + S+LSA SHSG+V+ G +F M + +
Sbjct: 391 SCYGIHGNGQEVVSLFLKMTE-SNIEPDHATFASLLSALSHSGLVEQGQHWFSVMINKYK 449
Query: 466 IEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAA 525
I+PS +HY+CL+DLL RAGR + AL I+ ++ +W LLS C+ H N+ +G+ AA
Sbjct: 450 IQPSEKHYVCLIDLLARAGRVEEALDMINSEKLDNALPIWVALLSGCINHRNLSVGDIAA 509
Query: 526 KNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVF 585
+L LNP S G L++N F +A WKE A R LM + + K PG+S +E++G ++ F
Sbjct: 510 NKILQLNPDSIGIQTLVSNFFATANKWKEVAKVRKLMRNGAMEKVPGYSAIEVNGELRTF 569
Query: 586 VAGDRSHHLSVDIRKTLKELHIKL 609
+ D SHH + + L+ L ++
Sbjct: 570 LMEDLSHHEHYHMLQVLRNLKTEI 593
Score = 170 bits (431), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 117/448 (26%), Positives = 222/448 (49%), Gaps = 35/448 (7%)
Query: 12 EETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGL 71
+E L Y M+ + +S TF + +KAC + + G+ V + G++ D FV + +
Sbjct: 98 DEVLRLYDQMIAEKIQPDSSTFTMTIKACLSGLVLEKGEAVWCKAVDFGYKNDVFVCSSV 157
Query: 72 IDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLEL 131
+++Y KC + + +M R V+ W ++++ ++A + +A+ +EM G
Sbjct: 158 LNLYMKCGKMDEAEVLFGKMAK--RDVICWTTMVTGFAQAGKSLKAVEFYREMQNEGFGR 215
Query: 132 SASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSI 187
+ ++ + G S+H +Y+ GL N + + S++ MYAK G + A +
Sbjct: 216 DRVVMLGLLQASGDLGDTKMGRSVHGYLYRTGLPMN-VVVETSLVDMYAKVGFIEVASRV 274
Query: 188 FDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNL 247
F + + VSW ++I G+ G N+AF +M+ + PDLV + +++ C+QVG+L
Sbjct: 275 FSRMMFKTAVSWGSLISGFAQNGLANKAFEAVVEMQSLGFQPDLVTLVGVLVACSQVGSL 334
Query: 248 FLALSMHSLLLKSGYNNEDPLDNL----LVSMYTKCGDLELARRVFDAVLEKSVFLWTSM 303
+H +LK LD + L+ MY+KCG L +R +F+ V K + W +M
Sbjct: 335 KTGRLVHCYILK-----RHVLDRVTATALMDMYSKCGALSSSREIFEHVGRKDLVCWNTM 389
Query: 304 IGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKE-----IEEYI 358
I Y G E V+LF ++ ++++ P+ AT A+ LSA + G + +G+ I +Y
Sbjct: 390 ISCYGIHGNGQEVVSLFLKMTESNIEPDHATFASLLSALSHSGLVEQGQHWFSVMINKY- 448
Query: 359 VLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVP-DKDLAVWSAMINGYAIH---GMG 414
++ + + LI + ++ GR+ +A ++ D L +W A+++G H +G
Sbjct: 449 ---KIQPSEKHYVCLIDLLARAGRVEEALDMINSEKLDNALPIWVALLSGCINHRNLSVG 505
Query: 415 DQALNLFYKMQHVEGLKPDAVVYTSILS 442
D A N + L PD++ +++S
Sbjct: 506 DIAANKILQ------LNPDSIGIQTLVS 527
Score = 103 bits (257), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 76/312 (24%), Positives = 144/312 (46%), Gaps = 10/312 (3%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
M+ G + + Y M G + +L+A ++ G+ VH ++ + G
Sbjct: 188 MVTGFAQAGKSLKAVEFYREMQNEGFGRDRVVMLGLLQASGDLGDTKMGRSVHGYLYRTG 247
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+ V+T L+DMY+K + +V M ++ VSW S+IS ++ L ++A
Sbjct: 248 LPMNVVVETSLVDMYAKVGFIEVASRVFSRM--MFKTAVSWGSLISGFAQNGLANKAFEA 305
Query: 121 LKEMWVLGLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
+ EM LG + T V V+ C S + G +HC + K +L+ A ++M MY+
Sbjct: 306 VVEMQSLGFQPDLVTLVGVLVACSQVGSLKTGRLVHCYILKRHVLDR--VTATALMDMYS 363
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K G ++ +R IF+ +G +V W T+I Y GN E L +M ++ PD F +
Sbjct: 364 KCGALSSSREIFEHVGRKDLVCWNTMISCYGIHGNGQEVVSLFLKMTESNIEPDHATFAS 423
Query: 237 LILGCAQVGNLFLALSMHSLLL-KSGYNNEDPLDNLLVSMYTKCGDLELARRVFDA-VLE 294
L+ + G + S+++ K + L+ + + G +E A + ++ L+
Sbjct: 424 LLSALSHSGLVEQGQHWFSVMINKYKIQPSEKHYVCLIDLLARAGRVEEALDMINSEKLD 483
Query: 295 KSVFLWTSMIGG 306
++ +W +++ G
Sbjct: 484 NALPIWVALLSG 495
>sp|Q9SJ73|PP148_ARATH Pentatricopeptide repeat-containing protein At2g04860
OS=Arabidopsis thaliana GN=PCMP-E74 PE=2 SV=3
Length = 692
Score = 339 bits (869), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 188/577 (32%), Positives = 327/577 (56%), Gaps = 7/577 (1%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+I + NG + + MLQ G ++ T +L C + G+ VH K G
Sbjct: 122 LICGYSRNGYECDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSG 181
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+ D+ V+ LI YSKC++ S+ + EM + +S VSWN++I A+S++ L +EAI V
Sbjct: 182 LELDSQVKNALISFYSKCAELGSAEVLFREM--KDKSTVSWNTMIGAYSQSGLQEEAITV 239
Query: 121 LKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGK 180
K M+ +E+S T ++++S + +HC V K G++N +I + S++ Y++ G
Sbjct: 240 FKNMFEKNVEISPVTIINLLSAHVSHE--PLHCLVVKCGMVN-DISVVTSLVCAYSRCGC 296
Query: 181 VNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILG 240
+ A ++ + SIV T+I+ Y G+++ A ++ R++ + D V + ++ G
Sbjct: 297 LVSAERLYASAKQDSIVGLTSIVSCYAEKGDMDIAVVYFSKTRQLCMKIDAVALVGILHG 356
Query: 241 CAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLW 300
C + ++ + +S+H +KSG + + N L++MY+K D+E +F+ + E + W
Sbjct: 357 CKKSSHIDIGMSLHGYAIKSGLCTKTLVVNGLITMYSKFDDVETVLFLFEQLQETPLISW 416
Query: 301 TSMIGGYAQLGYPSEAVNLFKRLLKTS-VRPNEATLATTLSACAELGSLSKGKEIEEYIV 359
S+I G Q G S A +F +++ T + P+ T+A+ L+ C++L L+ GKE+ Y +
Sbjct: 417 NSVISGCVQSGRASTAFEVFHQMMLTGGLLPDAITIASLLAGCSQLCCLNLGKELHGYTL 476
Query: 360 LNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALN 419
N E+ V T+LI M++KCG +A+ VF+ + A W++MI+GY++ G+ +AL+
Sbjct: 477 RNNFENENFVCTALIDMYAKCGNEVQAESVFKSIKAPCTATWNSMISGYSLSGLQHRALS 536
Query: 420 LFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDL 479
+ +M+ +GLKPD + + +LSAC+H G VD+G F++M FGI P+++HY +V L
Sbjct: 537 CYLEMRE-KGLKPDEITFLGVLSACNHGGFVDEGKICFRAMIKEFGISPTLQHYALMVGL 595
Query: 480 LGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNY 539
LGRA F AL I +M ++ + VW LLSAC+ H +E+GEY A+ + L+ + G Y
Sbjct: 596 LGRACLFTEALYLIWKMDIKPDSAVWGALLSACIIHRELEVGEYVARKMFMLDYKNGGLY 655
Query: 540 ILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQV 576
+LM+NL+ + MW + R +M D G SQ+
Sbjct: 656 VLMSNLYATEAMWDDVVRVRNMMKDNGYDGYLGVSQI 692
Score = 173 bits (439), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 141/525 (26%), Positives = 253/525 (48%), Gaps = 38/525 (7%)
Query: 15 LSTYSSMLQTGVHGNSFTFPLVLKACA-NINSI-WDGKRVHSHVLKVGFQQDAFVQTGLI 72
++ + +L++ + N FT + L+A + NS ++V +H+ K G + +V+T L+
Sbjct: 33 ITIFRDLLRSSLTPNHFTMSIFLQATTTSFNSFKLQVEQVQTHLTKSGLDRFVYVKTSLL 92
Query: 73 DMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELS 132
++Y K S++ + DEMP R V WN++I +SR +A + M G S
Sbjct: 93 NLYLKKGCVTSAQMLFDEMPER--DTVVWNALICGYSRNGYECDAWKLFIVMLQQGFSPS 150
Query: 133 ASTFVSVVSGCS----FRQGISMHCCVYKLGL-LNNEIPLANSVMSMYAKFGKVNEARSI 187
A+T V+++ C QG S+H K GL L++++ N+++S Y+K ++ A +
Sbjct: 151 ATTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLELDSQVK--NALISFYSKCAELGSAEVL 208
Query: 188 FDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNL 247
F E+ + S VSW T+IG Y G EA + M +V V +NL+ A V +
Sbjct: 209 FREMKDKSTVSWNTMIGAYSQSGLQEEAITVFKNMFEKNVEISPVTIINLL--SAHVSH- 265
Query: 248 FLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGY 307
+H L++K G N+ + LV Y++CG L A R++ + + S+ TS++ Y
Sbjct: 266 ---EPLHCLVVKCGMVNDISVVTSLVCAYSRCGCLVSAERLYASAKQDSIVGLTSIVSCY 322
Query: 308 AQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNR 367
A+ G AV F + + ++ + L L C + + G + Y + +GL +
Sbjct: 323 AEKGDMDIAVVYFSKTRQLCMKIDAVALVGILHGCKKSSHIDIGMSLHGYAIKSGLCTKT 382
Query: 368 QVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHV 427
V LI M+SK + +FE++ + L W+++I+G G A +F++M
Sbjct: 383 LVVNGLITMYSKFDDVETVLFLFEQLQETPLISWNSVISGCVQSGRASTAFEVFHQMMLT 442
Query: 428 EGLKPDAVVYTSILSACSHSGMVDDGLSFFK-SMQSNFGIEPSIEHYLC--LVDLLGRAG 484
GL PDA+ S+L+ CS ++ G ++++NF E+++C L+D+ + G
Sbjct: 443 GGLLPDAITIASLLAGCSQLCCLNLGKELHGYTLRNNF----ENENFVCTALIDMYAKCG 498
Query: 485 RFDLALKTIHEMPVEVQAQ-VWAPLLSACMKHHNVELGEYAAKNL 528
EVQA+ V+ + + C N + Y+ L
Sbjct: 499 N-------------EVQAESVFKSIKAPCTATWNSMISGYSLSGL 530
Score = 110 bits (276), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 89/362 (24%), Positives = 160/362 (44%), Gaps = 47/362 (12%)
Query: 257 LLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEA 316
L KSG + + L+++Y K G + A+ +FD + E+ +W ++I GY++ GY +A
Sbjct: 76 LTKSGLDRFVYVKTSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNALICGYSRNGYECDA 135
Query: 317 VNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHM 376
LF +L+ P+ TL L C + G +S+G+ + +GLE + QV+ +LI
Sbjct: 136 WKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLELDSQVKNALISF 195
Query: 377 FSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKM--QHVE------ 428
+SKC + A+ +F + DK W+ MI Y+ G+ ++A+ +F M ++VE
Sbjct: 196 YSKCAELGSAEVLFREMKDKSTVSWNTMIGAYSQSGLQEEAITVFKNMFEKNVEISPVTI 255
Query: 429 --------------------GLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEP 468
G+ D V TS++ A S G + + S + +
Sbjct: 256 INLLSAHVSHEPLHCLVVKCGMVNDISVVTSLVCAYSRCGCLVSAERLYASAKQD----- 310
Query: 469 SIEHYLCLVDLLGRAGRFDLAL---KTIHEMPVEVQAQVWAPLLSACMKHHNVELG---- 521
SI +V G D+A+ ++ +++ A +L C K ++++G
Sbjct: 311 SIVGLTSIVSCYAEKGDMDIAVVYFSKTRQLCMKIDAVALVGILHGCKKSSHIDIGMSLH 370
Query: 522 EYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGS 581
YA K+ G +++ L T + + T L + + T W+ V I G
Sbjct: 371 GYAIKS------GLCTKTLVVNGLITMYSKFDDVETVLFLFEQLQETPLISWNSV-ISGC 423
Query: 582 VQ 583
VQ
Sbjct: 424 VQ 425
Score = 77.4 bits (189), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 79/144 (54%), Gaps = 3/144 (2%)
Query: 314 SEAVNLFKRLLKTSVRPNEATLATTLSACA-ELGSLS-KGKEIEEYIVLNGLESNRQVQT 371
S + +F+ LL++S+ PN T++ L A S + ++++ ++ +GL+ V+T
Sbjct: 30 SSPITIFRDLLRSSLTPNHFTMSIFLQATTTSFNSFKLQVEQVQTHLTKSGLDRFVYVKT 89
Query: 372 SLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLK 431
SL++++ K G + A+ +F+ +P++D VW+A+I GY+ +G A LF M +G
Sbjct: 90 SLLNLYLKKGCVTSAQMLFDEMPERDTVVWNALICGYSRNGYECDAWKLFIVMLQ-QGFS 148
Query: 432 PDAVVYTSILSACSHSGMVDDGLS 455
P A ++L C G V G S
Sbjct: 149 PSATTLVNLLPFCGQCGFVSQGRS 172
>sp|P93005|PP181_ARATH Pentatricopeptide repeat-containing protein At2g33680
OS=Arabidopsis thaliana GN=PCMP-E19 PE=3 SV=1
Length = 727
Score = 334 bits (856), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 195/628 (31%), Positives = 327/628 (52%), Gaps = 13/628 (2%)
Query: 1 MIRNSTNNGSFEETLST---YSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVL 57
+I + NG + + + M + N++T + KA +++ S G++ H+ V+
Sbjct: 86 LITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESSLQSSTVGRQAHALVV 145
Query: 58 KVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEA 117
K+ D +V T L+ MY K KV MP R + +W++++S ++ +EA
Sbjct: 146 KMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPER--NTYTWSTMVSGYATRGRVEEA 203
Query: 118 ILVLKEMWVLGLELSASTFV------SVVSGCSFRQGISMHCCVYKLGLLNNEIPLANSV 171
I V E S S +V S+ + G +HC K GLL + L+N++
Sbjct: 204 IKVFNLFLREKEEGSDSDYVFTAVLSSLAATIYVGLGRQIHCITIKNGLLGF-VALSNAL 262
Query: 172 MSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDL 231
++MY+K +NEA +FD G+ + ++W+ ++ GY G EA L ++M + P
Sbjct: 263 VTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSE 322
Query: 232 VVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDA 291
+ ++ C+ + L +HS LLK G+ LV MY K G L AR+ FD
Sbjct: 323 YTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADARKGFDC 382
Query: 292 VLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKG 351
+ E+ V LWTS+I GY Q EA+ L++R+ + PN+ T+A+ L AC+ L +L G
Sbjct: 383 LQERDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLATLELG 442
Query: 352 KEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIH 411
K++ + + +G + ++L M+SKCG + VF R P+KD+ W+AMI+G + +
Sbjct: 443 KQVHGHTIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNKDVVSWNAMISGLSHN 502
Query: 412 GMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIE 471
G GD+AL LF +M EG++PD V + +I+SACSH G V+ G +F M G++P ++
Sbjct: 503 GQGDEALELFEEML-AEGMEPDDVTFVNIISACSHKGFVERGWFYFNMMSDQIGLDPKVD 561
Query: 472 HYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTL 531
HY C+VDLL RAG+ A + I ++ +W LLSAC H ELG YA + L+ L
Sbjct: 562 HYACMVDLLSRAGQLKEAKEFIESANIDHGLCLWRILLSACKNHGKCELGVYAGEKLMAL 621
Query: 532 NPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRS 591
+ Y+ ++ ++T+ G ++ M ++KE G S +E+ VFV GD
Sbjct: 622 GSRESSTYVQLSGIYTALGRMRDVERVWKHMRANGVSKEVGCSWIELKNQYHVFVVGDTM 681
Query: 592 HHLSVDIRKTLKELHIKLLEAGYIAEAD 619
H + + + + + +++E G++ D
Sbjct: 682 HPMIEETKDLVCLVSRQMIEEGFVTVLD 709
Score = 189 bits (479), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 147/583 (25%), Positives = 274/583 (46%), Gaps = 50/583 (8%)
Query: 18 YSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSK 77
+ S QT ++ ++ T L + ++ G+ VH +++ G L++ Y+K
Sbjct: 2 HPSTFQTELNPHTSTLLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAK 61
Query: 78 CSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVL---KEMWVLGLELSAS 134
C + + + + + VVSWNS+I+ +S+ + V+ +EM + +A
Sbjct: 62 CGKLAKAHSIFN--AIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAY 119
Query: 135 TFVSVVSGCSFRQ----GISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDE 190
T + S Q G H V K+ +I + S++ MY K G V + +F
Sbjct: 120 TLAGIFKAESSLQSSTVGRQAHALVVKMSSF-GDIYVDTSLVGMYCKAGLVEDGLKVFAY 178
Query: 191 IGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSV--TPDLVVFLNLILGCAQVGNLF 248
+ E + +W+T++ GY G V EA + N R + VF ++ A +
Sbjct: 179 MPERNTYTWSTMVSGYATRGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAATIYVG 238
Query: 249 LALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYA 308
L +H + +K+G L N LV+MY+KC L A ++FD+ +++ W++M+ GY+
Sbjct: 239 LGRQIHCITIKNGLLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYS 298
Query: 309 QLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQ 368
Q G EAV LF R+ ++P+E T+ L+AC+++ L +GK++ +++ G E +
Sbjct: 299 QNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLF 358
Query: 369 VQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVE 428
T+L+ M++K G + A++ F+ + ++D+A+W+++I+GY + ++AL L+ +M+
Sbjct: 359 ATTALVDMYAKAGCLADARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRMK-TA 417
Query: 429 GLKPDAVVYTSILSACSHSGMVDDGLSFF-KSMQSNFGIEPSIEHYL------------- 474
G+ P+ S+L ACS ++ G +++ FG+E I L
Sbjct: 418 GIIPNDPTMASVLKACSSLATLELGKQVHGHTIKHGFGLEVPIGSALSTMYSKCGSLEDG 477
Query: 475 ----------------CLVDLLGRAGRFDLALKTIHEM---PVEVQAQVWAPLLSACMKH 515
++ L G+ D AL+ EM +E + ++SAC
Sbjct: 478 NLVFRRTPNKDVVSWNAMISGLSHNGQGDEALELFEEMLAEGMEPDDVTFVNIISACSHK 537
Query: 516 HNVELGEY---AAKNLLTLNPGSTGNYILMANLFTSAGMWKEA 555
VE G + + + L+P +Y M +L + AG KEA
Sbjct: 538 GFVERGWFYFNMMSDQIGLDP-KVDHYACMVDLLSRAGQLKEA 579
>sp|Q9LIC3|PP227_ARATH Putative pentatricopeptide repeat-containing protein At3g13770,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H85 PE=3
SV=1
Length = 628
Score = 334 bits (856), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 178/518 (34%), Positives = 289/518 (55%), Gaps = 6/518 (1%)
Query: 109 SRACLNDEAILVLKEMWVLGLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNE 164
S+ C N L EM +LG E+ + ++++ C + R G +H + K L
Sbjct: 28 SQLCSNGRLQEALLEMAMLGPEMGFHGYDALLNACLDKRALRDGQRVHAHMIKTRYLPAT 87
Query: 165 IPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRR 224
L ++ Y K + +AR + DE+ E ++VSWT +I Y G+ +EA + +M R
Sbjct: 88 Y-LRTRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALTVFAEMMR 146
Query: 225 MSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLEL 284
P+ F ++ C + L L +H L++K Y++ + + L+ MY K G ++
Sbjct: 147 SDGKPNEFTFATVLTSCIRASGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKE 206
Query: 285 ARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAE 344
AR +F+ + E+ V T++I GYAQLG EA+ +F RL + PN T A+ L+A +
Sbjct: 207 AREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTALSG 266
Query: 345 LGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAM 404
L L GK+ +++ L +Q SLI M+SKCG ++ A+ +F+ +P++ W+AM
Sbjct: 267 LALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPERTAISWNAM 326
Query: 405 INGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSM-QSN 463
+ GY+ HG+G + L LF M+ + +KPDAV ++LS CSH M D GL+ F M
Sbjct: 327 LVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGRMEDTGLNIFDGMVAGE 386
Query: 464 FGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEY 523
+G +P EHY C+VD+LGRAGR D A + I MP + A V LL AC H +V++GE
Sbjct: 387 YGTKPGTEHYGCIVDMLGRAGRIDEAFEFIKRMPSKPTAGVLGSLLGACRVHLSVDIGES 446
Query: 524 AAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQ 583
+ L+ + P + GNY++++NL+ SAG W + R +M + +TKEPG S ++ + ++
Sbjct: 447 VGRRLIEIEPENAGNYVILSNLYASAGRWADVNNVRAMMMQKAVTKEPGRSWIQHEQTLH 506
Query: 584 VFVAGDRSHHLSVDIRKTLKELHIKLLEAGYIAEADIV 621
F A DR+H ++ +KE+ IK+ +AGY+ + V
Sbjct: 507 YFHANDRTHPRREEVLAKMKEISIKMKQAGYVPDLSCV 544
Score = 196 bits (498), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 125/414 (30%), Positives = 221/414 (53%), Gaps = 16/414 (3%)
Query: 7 NNGSFEETLSTYSSM-LQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDA 65
+NG +E L + + + G HG + +L AC + ++ DG+RVH+H++K +
Sbjct: 32 SNGRLQEALLEMAMLGPEMGFHG----YDALLNACLDKRALRDGQRVHAHMIKTRYLPAT 87
Query: 66 FVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMW 125
+++T L+ Y KC +RKVLDEMP ++VVSW ++IS +S+ + EA+ V EM
Sbjct: 88 YLRTRLLIFYGKCDCLEDARKVLDEMPE--KNVVSWTAMISRYSQTGHSSEALTVFAEMM 145
Query: 126 VLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGL---LNNEIPLANSVMSMYAKFGKVN 182
+ + TF +V++ C G+ + ++ L + ++ I + +S++ MYAK G++
Sbjct: 146 RSDGKPNEFTFATVLTSCIRASGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIK 205
Query: 183 EARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCA 242
EAR IF+ + E +VS T II GY +G EA + +++ ++P+ V + +L+ +
Sbjct: 206 EAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTALS 265
Query: 243 QVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTS 302
+ L H +L+ L N L+ MY+KCG+L ARR+FD + E++ W +
Sbjct: 266 GLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPERTAISWNA 325
Query: 303 MIGGYAQLGYPSEAVNLFKRLLK--TSVRPNEATLATTLSACAELGSLSKGKEIEEYIVL 360
M+ GY++ G E + LF RL++ V+P+ TL LS C+ G I + +V
Sbjct: 326 MLVGYSKHGLGREVLELF-RLMRDEKRVKPDAVTLLAVLSGCSHGRMEDTGLNIFDGMVA 384
Query: 361 N--GLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLA-VWSAMINGYAIH 411
G + + ++ M + GRI++A E +R+P K A V +++ +H
Sbjct: 385 GEYGTKPGTEHYGCIVDMLGRAGRIDEAFEFIKRMPSKPTAGVLGSLLGACRVH 438
Score = 121 bits (304), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 74/252 (29%), Positives = 128/252 (50%), Gaps = 16/252 (6%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI + G E L+ ++ M+++ N FTF VL +C + + GK++H ++K
Sbjct: 124 MISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHGLIVKWN 183
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+ FV + L+DMY+K +R++ + +P R VVS +II+ +++ L++EA+ +
Sbjct: 184 YDSHIFVGSSLLDMYAKAGQIKEAREIFECLPE--RDVVSCTAIIAGYAQLGLDEEALEM 241
Query: 121 LKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIP----LANSVM 172
+ G+ + T+ S+++ S G HC V L E+P L NS++
Sbjct: 242 FHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHV-----LRRELPFYAVLQNSLI 296
Query: 173 SMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMR-RMSVTPDL 231
MY+K G ++ AR +FD + E + +SW ++ GY G E L MR V PD
Sbjct: 297 DMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDA 356
Query: 232 VVFLNLILGCAQ 243
V L ++ GC+
Sbjct: 357 VTLLAVLSGCSH 368
>sp|Q0WN60|PPR48_ARATH Pentatricopeptide repeat-containing protein At1g18485
OS=Arabidopsis thaliana GN=PCMP-H8 PE=2 SV=2
Length = 970
Score = 333 bits (855), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 195/625 (31%), Positives = 342/625 (54%), Gaps = 15/625 (2%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHG----NSFTFPLVLKACANINSIWDGKRVHSHV 56
MIR ++NG EE+ M++ G + T VL CA I GK VH
Sbjct: 259 MIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWA 318
Query: 57 LKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDE 116
+K+ ++ + L+DMYSKC +++ +++ +M ++VVSWN+++ S
Sbjct: 319 VKLRLDKELVLNNALMDMYSKCG-CITNAQMIFKMNNN-KNVVSWNTMVGGFSAEGDTHG 376
Query: 117 AILVLKEMWVLGLELSAS--TFVSVVSGC---SFRQGIS-MHCCVYKLGLLNNEIPLANS 170
VL++M G ++ A T ++ V C SF + +HC K + NE+ +AN+
Sbjct: 377 TFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNEL-VANA 435
Query: 171 VMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPD 230
++ YAK G ++ A+ +F I ++ SW +IGG+ + + QM+ + PD
Sbjct: 436 FVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPD 495
Query: 231 LVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFD 290
+L+ C+++ +L L +H ++++ + + ++S+Y CG+L + +FD
Sbjct: 496 SFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFD 555
Query: 291 AVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSK 350
A+ +KS+ W ++I GY Q G+P A+ +F++++ ++ ++ AC+ L SL
Sbjct: 556 AMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRL 615
Query: 351 GKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAI 410
G+E Y + + LE + + SLI M++K G I ++ +VF + +K A W+AMI GY I
Sbjct: 616 GREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGI 675
Query: 411 HGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSI 470
HG+ +A+ LF +MQ G PD + + +L+AC+HSG++ +GL + M+S+FG++P++
Sbjct: 676 HGLAKEAIKLFEEMQRT-GHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNL 734
Query: 471 EHYLCLVDLLGRAGRFDLALKTI-HEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLL 529
+HY C++D+LGRAG+ D AL+ + EM E +W LLS+C H N+E+GE A L
Sbjct: 735 KHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGEKVAAKLF 794
Query: 530 TLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGD 589
L P NY+L++NL+ G W++ R M++ L K+ G S +E++ V FV G+
Sbjct: 795 ELEPEKPENYVLLSNLYAGLGKWEDVRKVRQRMNEMSLRKDAGCSWIELNRKVFSFVVGE 854
Query: 590 RSHHLSVDIRKTLKELHIKLLEAGY 614
R +I+ L +K+ + GY
Sbjct: 855 RFLDGFEEIKSLWSILEMKISKMGY 879
Score = 215 bits (547), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 138/455 (30%), Positives = 236/455 (51%), Gaps = 13/455 (2%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQT-GVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKV 59
+I + + N ++E L T+ M+ T + + FT+P V+KACA ++ + G VH V+K
Sbjct: 157 VISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKT 216
Query: 60 GFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAIL 119
G +D FV L+ Y + ++ D MP R ++VSWNS+I S ++E+ L
Sbjct: 217 GLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPER--NLVSWNSMIRVFSDNGFSEESFL 274
Query: 120 VLKEMWVL----GLELSASTFVSVVSGCSFRQGISMHCCVYKLGL---LNNEIPLANSVM 172
+L EM +T V+V+ C+ + I + V+ + L+ E+ L N++M
Sbjct: 275 LLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALM 334
Query: 173 SMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRR--MSVTPD 230
MY+K G + A+ IF ++VSW T++GG+ G+ + F + QM V D
Sbjct: 335 DMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKAD 394
Query: 231 LVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFD 290
V LN + C L +H LK + + + N V+ Y KCG L A+RVF
Sbjct: 395 EVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFH 454
Query: 291 AVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSK 350
+ K+V W ++IGG+AQ P +++ ++ + + P+ T+ + LSAC++L SL
Sbjct: 455 GIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRL 514
Query: 351 GKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAI 410
GKE+ +I+ N LE + V S++ ++ CG + + +F+ + DK L W+ +I GY
Sbjct: 515 GKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQ 574
Query: 411 HGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACS 445
+G D+AL +F +M + G++ + + ACS
Sbjct: 575 NGFPDRALGVFRQMV-LYGIQLCGISMMPVFGACS 608
Score = 163 bits (412), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 117/423 (27%), Positives = 210/423 (49%), Gaps = 16/423 (3%)
Query: 35 LVLKACANINSIWDGKRVHSHVL-KVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPV 93
L+L+A I G+++H V + D + T +I MY+ C SR V D +
Sbjct: 89 LLLQASGKRKDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDAL-- 146
Query: 94 RLRSVVSWNSIISAHSRACLNDEAILVLKEMW-VLGLELSASTFVSVVSGCSFRQ----G 148
R +++ WN++IS++SR L DE + EM L T+ V+ C+ G
Sbjct: 147 RSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIG 206
Query: 149 ISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVN 208
+++H V K GL+ ++ + N+++S Y G V +A +FD + E ++VSW ++I + +
Sbjct: 207 LAVHGLVVKTGLV-EDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSD 265
Query: 209 VGNVNEAFGLCNQMRRM----SVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNN 264
G E+F L +M + PD+ + ++ CA+ + L +H +K +
Sbjct: 266 NGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDK 325
Query: 265 EDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLL 324
E L+N L+ MY+KCG + A+ +F K+V W +M+GG++ G ++ +++L
Sbjct: 326 ELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQML 385
Query: 325 K--TSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGR 382
V+ +E T+ + C L KE+ Y + N V + + ++KCG
Sbjct: 386 AGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGS 445
Query: 383 INKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILS 442
++ A+ VF + K + W+A+I G+A +L+ +M+ + GL PD+ S+LS
Sbjct: 446 LSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMK-ISGLLPDSFTVCSLLS 504
Query: 443 ACS 445
ACS
Sbjct: 505 ACS 507
Score = 119 bits (298), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 87/341 (25%), Positives = 162/341 (47%), Gaps = 13/341 (3%)
Query: 116 EAILVLKEMWVLGLELSASTFVSVVSGCSFRQGISMHCCVYKLGLLNNEIPLANSVMSMY 175
+A L+++E LGL L AS + G +H V L N+ L +++MY
Sbjct: 78 DAFLLVRE--ALGLLLQASGKRKDIE-----MGRKIHQLVSGSTRLRNDDVLCTRIITMY 130
Query: 176 AKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQM-RRMSVTPDLVVF 234
A G +++R +FD + ++ W +I Y +E +M + PD +
Sbjct: 131 AMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTY 190
Query: 235 LNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLE 294
+I CA + ++ + L++H L++K+G + + N LVS Y G + A ++FD + E
Sbjct: 191 PCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPE 250
Query: 295 KSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKT----SVRPNEATLATTLSACAELGSLSK 350
+++ W SMI ++ G+ E+ L +++ + P+ ATL T L CA +
Sbjct: 251 RNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGL 310
Query: 351 GKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAI 410
GK + + V L+ + +L+ M+SKCG I A+ +F+ +K++ W+ M+ G++
Sbjct: 311 GKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSA 370
Query: 411 HGMGDQALNLFYKM-QHVEGLKPDAVVYTSILSACSHSGMV 450
G ++ +M E +K D V + + C H +
Sbjct: 371 EGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFL 411
Score = 55.5 bits (132), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 63/122 (51%), Gaps = 3/122 (2%)
Query: 334 TLATTLSACAELGSLSKGKEIEEYIV-LNGLESNRQVQTSLIHMFSKCGRINKAKEVFER 392
L L A + + G++I + + L ++ + T +I M++ CG + ++ VF+
Sbjct: 86 ALGLLLQASGKRKDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDA 145
Query: 393 VPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDD 452
+ K+L W+A+I+ Y+ + + D+ L F +M L PD Y ++ AC +GM D
Sbjct: 146 LRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKAC--AGMSDV 203
Query: 453 GL 454
G+
Sbjct: 204 GI 205
>sp|Q5G1T1|PP272_ARATH Pentatricopeptide repeat-containing protein At3g49170,
chloroplastic OS=Arabidopsis thaliana GN=EMB2261 PE=2
SV=1
Length = 850
Score = 332 bits (851), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 200/626 (31%), Positives = 332/626 (53%), Gaps = 17/626 (2%)
Query: 7 NNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG-FQQDA 65
NNG + + + L+ G+ N + + V++AC+N + + G+ ++K G F+ D
Sbjct: 143 NNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDV 202
Query: 66 FVQTGLIDMYSKCSD-FVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEM 124
V LIDM+ K + F ++ KV D+M +VV+W +I+ + EAI +M
Sbjct: 203 CVGCSLIDMFVKGENSFENAYKVFDKMSEL--NVVTWTLMITRCMQMGFPREAIRFFLDM 260
Query: 125 WVLGLELSASTFVSVVSGCSFRQGISM----HCCVYKLGLLNNEIPLANSVMSMYAKF-- 178
+ G E T SV S C+ + +S+ H + GL+++ + S++ MYAK
Sbjct: 261 VLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDD---VECSLVDMYAKCSA 317
Query: 179 -GKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNV-NEAFGLCNQM-RRMSVTPDLVVFL 235
G V++ R +FD + + S++SWT +I GY+ N+ EA L ++M + V P+ F
Sbjct: 318 DGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFS 377
Query: 236 NLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEK 295
+ C + + + + K G + + N ++SM+ K +E A+R F+++ EK
Sbjct: 378 SAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEK 437
Query: 296 SVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIE 355
++ + + + G + +A L + + + + T A+ LS A +GS+ KG++I
Sbjct: 438 NLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIH 497
Query: 356 EYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGD 415
+V GL N+ V +LI M+SKCG I+ A VF + ++++ W++MI G+A HG
Sbjct: 498 SQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAI 557
Query: 416 QALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLC 475
+ L F +M EG+KP+ V Y +ILSACSH G+V +G F SM + I+P +EHY C
Sbjct: 558 RVLETFNQMIE-EGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYAC 616
Query: 476 LVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGS 535
+VDLL RAG A + I+ MP + VW L AC H N ELG+ AA+ +L L+P
Sbjct: 617 MVDLLCRAGLLTDAFEFINTMPFQADVLVWRTFLGACRVHSNTELGKLAARKILELDPNE 676
Query: 536 TGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLS 595
YI ++N++ AG W+E+ R M +R L KE G S +E+ + F GD +H +
Sbjct: 677 PAAYIQLSNIYACAGKWEESTEMRRKMKERNLVKEGGCSWIEVGDKIHKFYVGDTAHPNA 736
Query: 596 VDIRKTLKELHIKLLEAGYIAEADIV 621
I L L ++ GY+ + D+V
Sbjct: 737 HQIYDELDRLITEIKRCGYVPDTDLV 762
Score = 174 bits (441), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 141/529 (26%), Positives = 243/529 (45%), Gaps = 21/529 (3%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHG-NSFTFPLVLKACANINSIWDGKRVHSHVLKV 59
+I N G +S M + G+ +S TF +LK+C GK VH+ +++
Sbjct: 32 LILRHLNAGDLRGAVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEF 91
Query: 60 GFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEM-PVRLRSVVSWNSIISAHSRACLNDEAI 118
+ D+ + LI +YSK D + V + M R VVSW+++++ + +AI
Sbjct: 92 DIEPDSVLYNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAI 151
Query: 119 LVLKEMWVLGLELSASTFVSVVSGCSFRQGISMHCC----VYKLGLLNNEIPLANSVMSM 174
V E LGL + + +V+ CS + + + K G +++ + S++ M
Sbjct: 152 KVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDM 211
Query: 175 YAKFGKVNE-ARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVV 233
+ K E A +FD++ E ++V+WT +I + +G EA M D
Sbjct: 212 FVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFT 271
Query: 234 FLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKC---GDLELARRVFD 290
++ CA++ NL L +HS ++SG D ++ LV MY KC G ++ R+VFD
Sbjct: 272 LSSVFSACAELENLSLGKQLHSWAIRSGL--VDDVECSLVDMYAKCSADGSVDDCRKVFD 329
Query: 291 AVLEKSVFLWTSMIGGYAQ-LGYPSEAVNLFKRLL-KTSVRPNEATLATTLSACAELGSL 348
+ + SV WT++I GY + +EA+NLF ++ + V PN T ++ AC L
Sbjct: 330 RMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDP 389
Query: 349 SKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGY 408
GK++ GL SN V S+I MF K R+ A+ FE + +K+L ++ ++G
Sbjct: 390 RVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGT 449
Query: 409 AIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEP 468
+ +QA L ++ E L A + S+LS ++ G + G S G+
Sbjct: 450 CRNLNFEQAFKLLSEITERE-LGVSAFTFASLLSGVANVGSIRKGEQ-IHSQVVKLGL-- 505
Query: 469 SIEHYLC--LVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKH 515
S +C L+ + + G D A + + M W +++ KH
Sbjct: 506 SCNQPVCNALISMYSKCGSIDTASRVFNFME-NRNVISWTSMITGFAKH 553
>sp|Q9LU94|PP255_ARATH Putative pentatricopeptide repeat-containing protein At3g25970
OS=Arabidopsis thaliana GN=PCMP-E46 PE=3 SV=2
Length = 701
Score = 331 bits (849), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 196/622 (31%), Positives = 336/622 (54%), Gaps = 29/622 (4%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI T+ G E+ ++ M ++G + ++F +LK A++ G++VH V+K G
Sbjct: 72 MISGYTSCGKLEDAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGG 131
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
++ + +V + L+DMY+KC + + E + + VSWN++I+ + + D +
Sbjct: 132 YECNVYVGSSLVDMYAKCERVEDAFEAFKE--ISEPNSVSWNALIAGFVQ--VRD----I 183
Query: 121 LKEMWVLGL-------ELSASTFVSVVS------GCSFRQGISMHCCVYKLGLLNNEIPL 167
W+LGL + A TF +++ C+ + + H V KLGL +EI +
Sbjct: 184 KTAFWLLGLMEMKAAVTMDAGTFAPLLTLLDDPMFCNLLKQV--HAKVLKLGL-QHEITI 240
Query: 168 ANSVMSMYAKFGKVNEARSIFDEIG-ETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMS 226
N+++S YA G V++A+ +FD +G ++SW ++I G+ AF L QM+R
Sbjct: 241 CNAMISSYADCGSVSDAKRVFDGLGGSKDLISWNSMIAGFSKHELKESAFELFIQMQRHW 300
Query: 227 VTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTK--CGDLEL 284
V D+ + L+ C+ + S+H +++K G N L+SMY + G +E
Sbjct: 301 VETDIYTYTGLLSACSGEEHQIFGKSLHGMVIKKGLEQVTSATNALISMYIQFPTGTMED 360
Query: 285 ARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAE 344
A +F+++ K + W S+I G+AQ G +AV F L + ++ ++ + L +C++
Sbjct: 361 ALSLFESLKSKDLISWNSIITGFAQKGLSEDAVKFFSYLRSSEIKVDDYAFSALLRSCSD 420
Query: 345 LGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAV-WSA 403
L +L G++I +G SN V +SLI M+SKCG I A++ F+++ K V W+A
Sbjct: 421 LATLQLGQQIHALATKSGFVSNEFVISSLIVMYSKCGIIESARKCFQQISSKHSTVAWNA 480
Query: 404 MINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSN 463
MI GYA HG+G +L+LF +M + + +K D V +T+IL+ACSH+G++ +GL M+
Sbjct: 481 MILGYAQHGLGQVSLDLFSQMCN-QNVKLDHVTFTAILTACSHTGLIQEGLELLNLMEPV 539
Query: 464 FGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEY 523
+ I+P +EHY VDLLGRAG + A + I MP+ V L C +E+
Sbjct: 540 YKIQPRMEHYAAAVDLLGRAGLVNKAKELIESMPLNPDPMVLKTFLGVCRACGEIEMATQ 599
Query: 524 AAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQ 583
A +LL + P Y+ ++++++ W+E A+ + +M +R + K PGWS +EI V+
Sbjct: 600 VANHLLEIEPEDHFTYVSLSHMYSDLKKWEEKASVKKMMKERGVKKVPGWSWIEIRNQVK 659
Query: 584 VFVAGDRSHHLSVDIRKTLKEL 605
F A DRS+ L DI +K+L
Sbjct: 660 AFNAEDRSNPLCQDIYMMIKDL 681
Score = 159 bits (403), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 117/402 (29%), Positives = 196/402 (48%), Gaps = 12/402 (2%)
Query: 52 VHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRA 111
H + +K G D +V ++D Y K + + DEMP R VSWN++IS ++
Sbjct: 22 THCYAIKCGSISDIYVSNRILDSYIKFGFLGYANMLFDEMPK--RDSVSWNTMISGYTSC 79
Query: 112 CLNDEAILVLKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPL 167
++A + M G ++ +F ++ G + F G +H V K G N + +
Sbjct: 80 GKLEDAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECN-VYV 138
Query: 168 ANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMR-RMS 226
+S++ MYAK +V +A F EI E + VSW +I G+V V ++ AF L M + +
Sbjct: 139 GSSLVDMYAKCERVEDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAA 198
Query: 227 VTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELAR 286
VT D F L+ L +H+ +LK G +E + N ++S Y CG + A+
Sbjct: 199 VTMDAGTFAPLLTLLDDPMFCNLLKQVHAKVLKLGLQHEITICNAMISSYADCGSVSDAK 258
Query: 287 RVFDAV-LEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAEL 345
RVFD + K + W SMI G+++ A LF ++ + V + T LSAC+
Sbjct: 259 RVFDGLGGSKDLISWNSMIAGFSKHELKESAFELFIQMQRHWVETDIYTYTGLLSACSGE 318
Query: 346 GSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSK--CGRINKAKEVFERVPDKDLAVWSA 403
GK + ++ GLE +LI M+ + G + A +FE + KDL W++
Sbjct: 319 EHQIFGKSLHGMVIKKGLEQVTSATNALISMYIQFPTGTMEDALSLFESLKSKDLISWNS 378
Query: 404 MINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACS 445
+I G+A G+ + A+ F ++ E +K D ++++L +CS
Sbjct: 379 IITGFAQKGLSEDAVKFFSYLRSSE-IKVDDYAFSALLRSCS 419
Score = 40.8 bits (94), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 41/184 (22%), Positives = 79/184 (42%), Gaps = 8/184 (4%)
Query: 357 YIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQ 416
Y + G S+ V ++ + K G + A +F+ +P +D W+ MI+GY G +
Sbjct: 25 YAIKCGSISDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGKLED 84
Query: 417 ALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCL 476
A LF M+ G D ++ +L + D G + G E ++ L
Sbjct: 85 AWCLFTCMKR-SGSDVDGYSFSRLLKGIASVKRFDLGEQ-VHGLVIKGGYECNVYVGSSL 142
Query: 477 VDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVE-----LGEYAAKNLLTL 531
VD+ + R + A + E+ E + W L++ ++ +++ LG K +T+
Sbjct: 143 VDMYAKCERVEDAFEAFKEIS-EPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAAVTM 201
Query: 532 NPGS 535
+ G+
Sbjct: 202 DAGT 205
>sp|Q9SR82|PP219_ARATH Putative pentatricopeptide repeat-containing protein At3g08820
OS=Arabidopsis thaliana GN=PCMP-H84 PE=3 SV=1
Length = 685
Score = 328 bits (841), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 182/578 (31%), Positives = 315/578 (54%), Gaps = 12/578 (2%)
Query: 50 KRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKV--LDEMPVRLRSVVSWNSIISA 107
K++H ++ D F L+++ K + F K L + ++ +NS+I+
Sbjct: 30 KQIHVSLINHHLHHDTF----LVNLLLKRTLFFRQTKYSYLLFSHTQFPNIFLYNSLING 85
Query: 108 HSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNN 163
L E + + + GL L TF V+ C S + GI +H V K G N+
Sbjct: 86 FVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGIDLHSLVVKCGF-NH 144
Query: 164 EIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMR 223
++ S++S+Y+ G++N+A +FDEI + S+V+WT + GY G EA L +M
Sbjct: 145 DVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLFKKMV 204
Query: 224 RMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLE 283
M V PD + ++ C VG+L + + + + LV++Y KCG +E
Sbjct: 205 EMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCGKME 264
Query: 284 LARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACA 343
AR VFD+++EK + W++MI GYA +P E + LF ++L+ +++P++ ++ LS+CA
Sbjct: 265 KARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQFSIVGFLSSCA 324
Query: 344 ELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSA 403
LG+L G+ I + +N + +LI M++KCG + + EVF+ + +KD+ + +A
Sbjct: 325 SLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMKEKDIVIMNA 384
Query: 404 MINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSN 463
I+G A +G + +F + + + G+ PD + +L C H+G++ DGL FF ++
Sbjct: 385 AISGLAKNGHVKLSFAVFGQTEKL-GISPDGSTFLGLLCGCVHAGLIQDGLRFFNAISCV 443
Query: 464 FGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEY 523
+ ++ ++EHY C+VDL GRAG D A + I +MP+ A VW LLS C + +L E
Sbjct: 444 YALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALLSGCRLVKDTQLAET 503
Query: 524 AAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQ 583
K L+ L P + GNY+ ++N+++ G W EAA R +M+ + + K PG+S +E++G V
Sbjct: 504 VLKELIALEPWNAGNYVQLSNIYSVGGRWDEAAEVRDMMNKKGMKKIPGYSWIELEGKVH 563
Query: 584 VFVAGDRSHHLSVDIRKTLKELHIKLLEAGYIAEADIV 621
F+A D+SH LS I L++L ++ G++ + V
Sbjct: 564 EFLADDKSHPLSDKIYAKLEDLGNEMRLMGFVPTTEFV 601
Score = 176 bits (445), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 134/494 (27%), Positives = 231/494 (46%), Gaps = 45/494 (9%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+I NN F ETL + S+ + G++ + FTFPLVLKAC +S G +HS V+K G
Sbjct: 82 LINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGIDLHSLVVKCG 141
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F D T L+ +YS + K+ DE+P RSVV+W ++ S ++ + + EAI +
Sbjct: 142 FNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPD--RSVVTWTALFSGYTTSGRHREAIDL 199
Query: 121 LKEMWVLGLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYA 176
K+M +G++ + V V+S C G + + ++ + N + +++++YA
Sbjct: 200 FKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSF-VRTTLVNLYA 258
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
K GK+ +ARS+FD + E IV+W+T+I GY + E L QM + ++ PD +
Sbjct: 259 KCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQFSIVG 318
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKS 296
+ CA +G L L SL+ + + + N L+ MY KCG + VF + EK
Sbjct: 319 FLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMKEKD 378
Query: 297 VFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEE 356
+ + + I G A+ G+ + +F + K + P+ +T L C G + G
Sbjct: 379 IVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGLIQDG----- 433
Query: 357 YIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQ 416
+ F+ + K E + M++ + GM D
Sbjct: 434 -----------------LRFFNAISCVYALKRTVEH--------YGCMVDLWGRAGMLDD 468
Query: 417 ALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEP-SIEHYLC 475
A L M ++P+A+V+ ++LS C +V D ++ +EP + +Y+
Sbjct: 469 AYRLICDMP----MRPNAIVWGALLSGCR---LVKDTQLAETVLKELIALEPWNAGNYVQ 521
Query: 476 LVDLLGRAGRFDLA 489
L ++ GR+D A
Sbjct: 522 LSNIYSVGGRWDEA 535
>sp|Q9SMZ2|PP347_ARATH Pentatricopeptide repeat-containing protein At4g33170
OS=Arabidopsis thaliana GN=PCMP-H53 PE=3 SV=1
Length = 990
Score = 327 bits (838), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 187/619 (30%), Positives = 328/619 (52%), Gaps = 8/619 (1%)
Query: 7 NNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAF 66
++G + L ++ M+++ V + TF L+L ++S+ G++VH LK+G
Sbjct: 292 HSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLT 351
Query: 67 VQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWV 126
V LI+MY K F +R V D M R ++SWNS+I+ ++ L EA+ + ++
Sbjct: 352 VSNSLINMYCKLRKFGFARTVFDNMSER--DLISWNSVIAGIAQNGLEVEAVCLFMQLLR 409
Query: 127 LGLELSASTFVSVV-SGCSFRQGISMHCCVYKLGLLNNEIP---LANSVMSMYAKFGKVN 182
GL+ T SV+ + S +G+S+ V+ + N + ++ +++ Y++ +
Sbjct: 410 CGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMK 469
Query: 183 EARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCA 242
EA +F E +V+W ++ GY + ++ L M + D + C
Sbjct: 470 EAEILF-ERHNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCG 528
Query: 243 QVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTS 302
+ + +H+ +KSGY+ + + + ++ MY KCGD+ A+ FD++ WT+
Sbjct: 529 FLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTT 588
Query: 303 MIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNG 362
MI G + G A ++F ++ V P+E T+AT A + L +L +G++I +
Sbjct: 589 MISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLN 648
Query: 363 LESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFY 422
++ V TSL+ M++KCG I+ A +F+R+ ++ W+AM+ G A HG G + L LF
Sbjct: 649 CTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFK 708
Query: 423 KMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGR 482
+M+ + G+KPD V + +LSACSHSG+V + +SM ++GI+P IEHY CL D LGR
Sbjct: 709 QMKSL-GIKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHGDYGIKPEIEHYSCLADALGR 767
Query: 483 AGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILM 542
AG A I M +E A ++ LL+AC + E G+ A LL L P + Y+L+
Sbjct: 768 AGLVKQAENLIESMSMEASASMYRTLLAACRVQGDTETGKRVATKLLELEPLDSSAYVLL 827
Query: 543 ANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHHLSVDIRKTL 602
+N++ +A W E AR +M ++ K+PG+S +E+ + +FV DRS+ + I + +
Sbjct: 828 SNMYAAASKWDEMKLARTMMKGHKVKKDPGFSWIEVKNKIHIFVVDDRSNRQTELIYRKV 887
Query: 603 KELHIKLLEAGYIAEADIV 621
K++ + + GY+ E D
Sbjct: 888 KDMIRDIKQEGYVPETDFT 906
Score = 145 bits (365), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 114/458 (24%), Positives = 204/458 (44%), Gaps = 43/458 (9%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANI-NSIWDGKRVHSHVLKV 59
+I NG E + + +L+ G+ + +T VLKA +++ + K+VH H +K+
Sbjct: 387 VIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKI 446
Query: 60 GFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAIL 119
D+FV T LID YS+ + + + L V+WN++++ ++++ + +
Sbjct: 447 NNVSDSFVSTALIDAYSRNRCMKEAEILFERHNFDL---VAWNAMMAGYTQSHDGHKTLK 503
Query: 120 VLKEMWVLGLELSASTFVSVVSGCSF----RQGISMHCCVYKLGLLNNEIPLANSVMSMY 175
+ M G T +V C F QG +H K G + ++ +++ ++ MY
Sbjct: 504 LFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSG-YDLDLWVSSGILDMY 562
Query: 176 AKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFL 235
K G ++ A+ FD I V+WTT+I G + G AF + +QMR M V PD
Sbjct: 563 VKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIA 622
Query: 236 NLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEK 295
L + + L +H+ LK N+ + LV MY KCG ++ A +F +
Sbjct: 623 TLAKASSCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMM 682
Query: 296 SVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIE 355
++ W +M+ G AQ G E + LFK++ ++P++ T LSAC+ G +S E
Sbjct: 683 NITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSACSHSGLVS-----E 737
Query: 356 EYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGD 415
Y + + + ++ + H +S + + G+
Sbjct: 738 AYKHMRSMHGDYGIKPEIEH-------------------------YSCLADALGRAGLVK 772
Query: 416 QALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDG 453
QA NL M ++ A +Y ++L+AC G + G
Sbjct: 773 QAENLIESM----SMEASASMYRTLLAACRVQGDTETG 806
Score = 142 bits (359), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 127/507 (25%), Positives = 220/507 (43%), Gaps = 54/507 (10%)
Query: 23 QTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFV 82
Q V+ + T +LK C + +W + H + K+G D FV L+++Y K
Sbjct: 138 QDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKIGLDGDEFVAGALVNIYLKFGKVK 197
Query: 83 SSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSG 142
+ + +EMP R VV WN ++ A+ +EAI +LS++ S
Sbjct: 198 EGKVLFEEMPYR--DVVLWNLMLKAYLEMGFKEEAI-----------DLSSAFHSS---- 240
Query: 143 CSFRQGISMHCCVYKLGLLNNEIPLA--------NSVMSMYAKFGKVNEARSIFDEIGET 194
GL NEI L +S F N+A S+ +
Sbjct: 241 ----------------GLNPNEITLRLLARISGDDSDAGQVKSFANGNDASSV------S 278
Query: 195 SIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMH 254
I+ + Y++ G + M V D V F+ ++ +V +L L +H
Sbjct: 279 EIIFRNKGLSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVH 338
Query: 255 SLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPS 314
+ LK G + + N L++MY K AR VFD + E+ + W S+I G AQ G
Sbjct: 339 CMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEV 398
Query: 315 EAVNLFKRLLKTSVRPNEATLATTLSACAELGS-LSKGKEIEEYIVLNGLESNRQVQTSL 373
EAV LF +LL+ ++P++ T+ + L A + L LS K++ + + S+ V T+L
Sbjct: 399 EAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTAL 458
Query: 374 IHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPD 433
I +S+ + +A+ +FER + DL W+AM+ GY G + L LF M H +G + D
Sbjct: 459 IDAYSRNRCMKEAEILFER-HNFDLVAWNAMMAGYTQSHDGHKTLKLFALM-HKQGERSD 516
Query: 434 AVVYTSILSACSHSGMVDDGLSFFK-SMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKT 492
++ C ++ G +++S + ++ + ++D+ + G A
Sbjct: 517 DFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSS--GILDMYVKCGDMSAAQFA 574
Query: 493 IHEMPVEVQAQVWAPLLSACMKHHNVE 519
+PV W ++S C+++ E
Sbjct: 575 FDSIPVPDDV-AWTTMISGCIENGEEE 600
Score = 127 bits (319), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 106/422 (25%), Positives = 195/422 (46%), Gaps = 48/422 (11%)
Query: 49 GKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAH 108
GK H+ +L + F+ LI MYSKC +R+V D+MP R +VSWNSI++A+
Sbjct: 58 GKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPD--RDLVSWNSILAAY 115
Query: 109 SRA--CLND---EAILVLKEMWVLGLELSASTFVSVVSGCSFRQGI----SMHCCVYKLG 159
+++ C+ + +A L+ + + + S T ++ C + S H K+G
Sbjct: 116 AQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKIG 175
Query: 160 LLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLC 219
L +E +A +++++Y KFGKV E + +F+E+ +V W ++ Y+ +G EA L
Sbjct: 176 LDGDEF-VAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLS 234
Query: 220 NQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKC 279
+ + P+ + LL + ++ D
Sbjct: 235 SAFHSSGLNPNEITL--------------------RLLARISGDDSDA------------ 262
Query: 280 GDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTL 339
G ++ DA + + Y G S + F ++++ V ++ T L
Sbjct: 263 GQVKSFANGNDASSVSEIIFRNKGLSEYLHSGQYSALLKCFADMVESDVECDQVTFILML 322
Query: 340 SACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLA 399
+ ++ SL+ G+++ + GL+ V SLI+M+ K + A+ VF+ + ++DL
Sbjct: 323 ATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLI 382
Query: 400 VWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKS 459
W+++I G A +G+ +A+ LF ++ GLKPD TS+L A S + +GLS K
Sbjct: 383 SWNSVIAGIAQNGLEVEAVCLFMQLLRC-GLKPDQYTMTSVLKAASS---LPEGLSLSKQ 438
Query: 460 MQ 461
+
Sbjct: 439 VH 440
Score = 122 bits (305), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 96/393 (24%), Positives = 178/393 (45%), Gaps = 45/393 (11%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
M+ T + +TL ++ M + G + FT V K C + +I GK+VH++ +K G
Sbjct: 488 MMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSG 547
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+ D +V +G++DMY KC D +++ D +PV V+W ++IS + A V
Sbjct: 548 YDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPV--PDDVAWTTMISGCIENGEEERAFHV 605
Query: 121 LKEMWVLGL---ELSASTFVSVVSGC--SFRQGISMHCCVYKLGLLNNEIPLANSVMSMY 175
+M ++G+ E + +T S C + QG +H KL N+ + S++ MY
Sbjct: 606 FSQMRLMGVLPDEFTIATLAK-ASSCLTALEQGRQIHANALKLNCTNDPF-VGTSLVDMY 663
Query: 176 AKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFL 235
AK G +++A +F I +I +W ++ G G E L QM+ + + PD V F+
Sbjct: 664 AKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFI 723
Query: 236 NLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEK 295
++ C+ HS L+ Y + + SM+ G ++
Sbjct: 724 GVLSACS-----------HSGLVSEAYKH-------MRSMHGDYG------------IKP 753
Query: 296 SVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIE 355
+ ++ + + G +A NL + + S+ + + T L+AC G GK +
Sbjct: 754 EIEHYSCLADALGRAGLVKQAENLIESM---SMEASASMYRTLLAACRVQGDTETGKRVA 810
Query: 356 EYIV-LNGLESNRQVQTSLIHMFSKCGRINKAK 387
++ L L+S+ V S +M++ + ++ K
Sbjct: 811 TKLLELEPLDSSAYVLLS--NMYAAASKWDEMK 841
Score = 99.8 bits (247), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 101/196 (51%), Gaps = 6/196 (3%)
Query: 246 NLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIG 305
+L L H+ +L N E L N L+SMY+KCG L ARRVFD + ++ + W S++
Sbjct: 54 DLMLGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILA 113
Query: 306 GYAQ-----LGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVL 360
YAQ + +A LF+ L + V + TL+ L C G + + Y
Sbjct: 114 AYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACK 173
Query: 361 NGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNL 420
GL+ + V +L++++ K G++ + K +FE +P +D+ +W+ M+ Y G ++A++L
Sbjct: 174 IGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDL 233
Query: 421 FYKMQHVEGLKPDAVV 436
H GL P+ +
Sbjct: 234 SSAF-HSSGLNPNEIT 248
>sp|Q56XI1|PPR25_ARATH Pentatricopeptide repeat-containing protein At1g09410
OS=Arabidopsis thaliana GN=PCMP-H18 PE=2 SV=2
Length = 705
Score = 327 bits (838), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 188/551 (34%), Positives = 312/551 (56%), Gaps = 26/551 (4%)
Query: 70 GLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGL 129
GL+ Y K + +RKV D MP R +VVSW +++ + +++ + V + ++
Sbjct: 84 GLVSGYMKNGEIDEARKVFDLMPER--NVVSWTALVKGY----VHNGKVDVAESLFWKMP 137
Query: 130 ELSASTFVSVVSGCSFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFD 189
E + ++ ++ G I C +Y++ + I + + + K G+V+EAR IFD
Sbjct: 138 EKNKVSWTVMLIGFLQDGRIDDACKLYEMIPDKDNIARTSMIHGL-CKEGRVDEAREIFD 196
Query: 190 EIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFL 249
E+ E S+++WTT++ GY V++A + + M + V + ++++G Q G +
Sbjct: 197 EMSERSVITWTTMVTGYGQNNRVDDARKIFDVMPEKTE----VSWTSMLMGYVQNGRIED 252
Query: 250 ALSMHSLLLKSGYNNEDPLD-----NLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMI 304
A + ++ P+ N ++S + G++ ARRVFD++ E++ W ++I
Sbjct: 253 AEELFEVM---------PVKPVIACNAMISGLGQKGEIAKARRVFDSMKERNDASWQTVI 303
Query: 305 GGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLE 364
+ + G+ EA++LF + K VRP TL + LS CA L SL GK++ +V +
Sbjct: 304 KIHERNGFELEALDLFILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQFD 363
Query: 365 SNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKM 424
+ V + L+ M+ KCG + K+K +F+R P KD+ +W+++I+GYA HG+G++AL +F +M
Sbjct: 364 VDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIMWNSIISGYASHGLGEEALKVFCEM 423
Query: 425 QHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAG 484
KP+ V + + LSACS++GMV++GL ++SM+S FG++P HY C+VD+LGRAG
Sbjct: 424 PLSGSTKPNEVTFVATLSACSYAGMVEEGLKIYESMESVFGVKPITAHYACMVDMLGRAG 483
Query: 485 RFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNPGSTGNYILMAN 544
RF+ A++ I M VE A VW LL AC H +++ E+ AK L+ + P ++G YIL++N
Sbjct: 484 RFNEAMEMIDSMTVEPDAAVWGSLLGACRTHSQLDVAEFCAKKLIEIEPENSGTYILLSN 543
Query: 545 LFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGD-RSHHLSVDIRKTLK 603
++ S G W + A R LM R + K PG S E++ V F G SH I K L
Sbjct: 544 MYASQGRWADVAELRKLMKTRLVRKSPGCSWTEVENKVHAFTRGGINSHPEQESILKILD 603
Query: 604 ELHIKLLEAGY 614
EL L EAGY
Sbjct: 604 ELDGLLREAGY 614
Score = 107 bits (268), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 143/277 (51%), Gaps = 17/277 (6%)
Query: 169 NSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVT 228
N ++S Y K G+++EAR +FD + E ++VSWT ++ GYV+ G V+ A L +M
Sbjct: 83 NGLVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWKMPE---- 138
Query: 229 PDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRV 288
+ V + +++G Q G + A ++ ++ + ++ ++ K G ++ AR +
Sbjct: 139 KNKVSWTVMLIGFLQDGRIDDACKLYEMIP----DKDNIARTSMIHGLCKEGRVDEAREI 194
Query: 289 FDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSL 348
FD + E+SV WT+M+ GY Q +A +F + + + E + + L + G +
Sbjct: 195 FDEMSERSVITWTTMVTGYGQNNRVDDARKIFDVMPEKT----EVSWTSMLMGYVQNGRI 250
Query: 349 SKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGY 408
+E+ E + + + + ++I + G I KA+ VF+ + +++ A W +I +
Sbjct: 251 EDAEELFEVMPVKPVIAC----NAMISGLGQKGEIAKARRVFDSMKERNDASWQTVIKIH 306
Query: 409 AIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACS 445
+G +AL+LF MQ +G++P SILS C+
Sbjct: 307 ERNGFELEALDLFILMQK-QGVRPTFPTLISILSVCA 342
Score = 103 bits (258), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 83/333 (24%), Positives = 151/333 (45%), Gaps = 61/333 (18%)
Query: 166 PLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRM 225
P AN ++ ++ GK++EAR +FD SI SW +++ GY
Sbjct: 18 PTANVRITHLSRIGKIHEARKLFDSCDSKSISSWNSMVAGY------------------- 58
Query: 226 SVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELA 285
F NL+ A+ LF + +++ +G LVS Y K G+++ A
Sbjct: 59 --------FANLMPRDAR--KLFDEMPDRNIISWNG----------LVSGYMKNGEIDEA 98
Query: 286 RRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAEL 345
R+VFD + E++V WT+++ GY G A +LF ++ + N+ + L +
Sbjct: 99 RKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWKMPEK----NKVSWTVMLIGFLQD 154
Query: 346 GSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMI 405
G + ++ E I + + +TS+IH K GR+++A+E+F+ + ++ + W+ M+
Sbjct: 155 GRIDDACKLYEMIP----DKDNIARTSMIHGLCKEGRVDEAREIFDEMSERSVITWTTMV 210
Query: 406 NGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFG 465
GY + D A +F M + V +TS+L +G ++D F+ M
Sbjct: 211 TGYGQNNRVDDARKIFDVMP-----EKTEVSWTSMLMGYVQNGRIEDAEELFEVMP---- 261
Query: 466 IEPSIEHYLC--LVDLLGRAGRFDLALKTIHEM 496
++P I C ++ LG+ G A + M
Sbjct: 262 VKPVI---ACNAMISGLGQKGEIAKARRVFDSM 291
Score = 87.8 bits (216), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 106/211 (50%), Gaps = 8/211 (3%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+I+ NG E L + M + GV T +L CA++ S+ GK+VH+ +++
Sbjct: 302 VIKIHERNGFELEALDLFILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQ 361
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
F D +V + L+ MY KC + V S+ + D P + ++ WNSIIS ++ L +EA+ V
Sbjct: 362 FDVDVYVASVLMTMYIKCGELVKSKLIFDRFPS--KDIIMWNSIISGYASHGLGEEALKV 419
Query: 121 LKEMWVLG-LELSASTFVSVVSGCSF----RQGISMHCCVYKLGLLNNEIPLANSVMSMY 175
EM + G + + TFV+ +S CS+ +G+ ++ + + + ++ M
Sbjct: 420 FCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIYESMESVFGVKPITAHYACMVDML 479
Query: 176 AKFGKVNEARSIFDEIG-ETSIVSWTTIIGG 205
+ G+ NEA + D + E W +++G
Sbjct: 480 GRAGRFNEAMEMIDSMTVEPDAAVWGSLLGA 510
>sp|Q9FIB2|PP373_ARATH Putative pentatricopeptide repeat-containing protein At5g09950
OS=Arabidopsis thaliana GN=PCMP-H35 PE=3 SV=1
Length = 995
Score = 326 bits (835), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 194/578 (33%), Positives = 318/578 (55%), Gaps = 12/578 (2%)
Query: 49 GKRVHSHVLKVGFQQDAF-VQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISA 107
G+ VH HV+ G + GL++MY+KC +R+V M + VSWNS+I+
Sbjct: 332 GREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDK--DSVSWNSMITG 389
Query: 108 HSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNN 163
+ EA+ K M + + T +S +S C+ + G +H KLG+ N
Sbjct: 390 LDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLN 449
Query: 164 EIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNV-GNVNEAFGLCNQM 222
+ ++N++M++YA+ G +NE R IF + E VSW +IIG ++ EA
Sbjct: 450 -VSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARSERSLPEAVVCFLNA 508
Query: 223 RRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDL 282
+R + + F +++ + + L +H L LK+ +E +N L++ Y KCG++
Sbjct: 509 QRAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKNNIADEATTENALIACYGKCGEM 568
Query: 283 ELARRVFDAVLEK-SVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSA 341
+ ++F + E+ W SMI GY ++A++L +L+T R + AT LSA
Sbjct: 569 DGCEKIFSRMAERRDNVTWNSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSA 628
Query: 342 CAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVW 401
A + +L +G E+ V LES+ V ++L+ M+SKCGR++ A F +P ++ W
Sbjct: 629 FASVATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSW 688
Query: 402 SAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQ 461
++MI+GYA HG G++AL LF M+ PD V + +LSACSH+G++++G F+SM
Sbjct: 689 NSMISGYARHGQGEEALKLFETMKLDGQTPPDHVTFVGVLSACSHAGLLEEGFKHFESMS 748
Query: 462 SNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHH--NVE 519
++G+ P IEH+ C+ D+LGRAG D I +MP++ +W +L AC + + E
Sbjct: 749 DSYGLAPRIEHFSCMADVLGRAGELDKLEDFIEKMPMKPNVLIWRTVLGACCRANGRKAE 808
Query: 520 LGEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEID 579
LG+ AA+ L L P + NY+L+ N++ + G W++ AR M D + KE G+S V +
Sbjct: 809 LGKKAAEMLFQLEPENAVNYVLLGNMYAAGGRWEDLVKARKKMKDADVKKEAGYSWVTMK 868
Query: 580 GSVQVFVAGDRSHHLSVDIRKTLKELHIKLLEAGYIAE 617
V +FVAGD+SH + I K LKEL+ K+ +AGY+ +
Sbjct: 869 DGVHMFVAGDKSHPDADVIYKKLKELNRKMRDAGYVPQ 906
Score = 160 bits (404), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 138/538 (25%), Positives = 251/538 (46%), Gaps = 24/538 (4%)
Query: 9 GSFEETLSTYSSMLQTGVHGNSFTF-PLVLKACANIN-SIWDGKRVHSHVLKVGFQQDAF 66
G +SSM G +TF LV AC+ + +++ + K G D F
Sbjct: 185 GDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLF 244
Query: 67 VQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWV 126
V +GL+ ++K +RKV ++M R + V+ N ++ R +EA + +M
Sbjct: 245 VGSGLVSAFAKSGSLSYARKVFNQMETR--NAVTLNGLMVGLVRQKWGEEATKLFMDMNS 302
Query: 127 LGLELSASTFVSVVSG---------CSFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAK 177
+ +++S ++V ++S ++G +H V GL++ + + N +++MYAK
Sbjct: 303 M-IDVSPESYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAK 361
Query: 178 FGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNL 237
G + +AR +F + + VSW ++I G G EA MRR + P ++
Sbjct: 362 CGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISS 421
Query: 238 ILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSV 297
+ CA + L +H LK G + + N L+++Y + G L R++F ++ E
Sbjct: 422 LSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQ 481
Query: 298 FLWTSMIGGYA--QLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIE 355
W S+IG A + P EAV F + + N T ++ LSA + L GK+I
Sbjct: 482 VSWNSIIGALARSERSLP-EAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFGELGKQIH 540
Query: 356 EYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPD-KDLAVWSAMINGYAIHGMG 414
+ N + + +LI + KCG ++ +++F R+ + +D W++MI+GY + +
Sbjct: 541 GLALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISGYIHNELL 600
Query: 415 DQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHYL 474
+AL+L + M G + D+ +Y ++LSA + ++ G+ + +E +
Sbjct: 601 AKALDLVWFMLQT-GQRLDSFMYATVLSAFASVATLERGME-VHACSVRACLESDVVVGS 658
Query: 475 CLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLN 532
LVD+ + GR D AL+ + MPV + W ++S +H GE A K T+
Sbjct: 659 ALVDMYSKCGRLDYALRFFNTMPVR-NSYSWNSMISGYARHGQ---GEEALKLFETMK 712
Score = 158 bits (400), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 145/526 (27%), Positives = 251/526 (47%), Gaps = 20/526 (3%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINS--IWDGKRVHSHVLK 58
++ + NG +E L M++ G+ N + F VL+AC I S I G+++H + K
Sbjct: 73 IVSGYSRNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFK 132
Query: 59 VGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAI 118
+ + DA V LI MY KC V + + +++ VSWNSIIS +S+A A
Sbjct: 133 LSYAVDAVVSNVLISMYWKCIGSV-GYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAF 191
Query: 119 LVLKEMWVLGLELSASTFVSVV-SGCSF-----RQGISMHCCVYKLGLLNNEIPLANSVM 172
+ M G + TF S+V + CS R + C + K GLL ++ + + ++
Sbjct: 192 RIFSSMQYDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLL-TDLFVGSGLV 250
Query: 173 SMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRM-SVTPD- 230
S +AK G ++ AR +F+++ + V+ ++ G V EA L M M V+P+
Sbjct: 251 SAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPES 310
Query: 231 LVVFLNLI--LGCAQVGNLFLALSMHSLLLKSGY-NNEDPLDNLLVSMYTKCGDLELARR 287
V+ L+ A+ L +H ++ +G + + N LV+MY KCG + ARR
Sbjct: 311 YVILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARR 370
Query: 288 VFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGS 347
VF + +K W SMI G Q G EAV +K + + + P TL ++LS+CA L
Sbjct: 371 VFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKW 430
Query: 348 LSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMING 407
G++I + G++ N V +L+ ++++ G +N+ +++F +P+ D W+++I
Sbjct: 431 AKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGA 490
Query: 408 YAIHGMG-DQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFK-SMQSNFG 465
A +A+ F Q G K + + ++S+LSA S + G ++++N
Sbjct: 491 LARSERSLPEAVVCFLNAQRA-GQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKNNIA 549
Query: 466 IEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSA 511
E + E+ L+ G+ G D K M W ++S
Sbjct: 550 DEATTEN--ALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISG 593
Score = 146 bits (369), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 131/475 (27%), Positives = 223/475 (46%), Gaps = 24/475 (5%)
Query: 53 HSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRAC 112
HS + K +D ++ LI+ Y + D VS+RKV DEMP LR+ VSW I+S +SR
Sbjct: 24 HSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMP--LRNCVSWACIVSGYSRNG 81
Query: 113 LNDEAILVLKEMWVLGLELSASTFVSVVSGCS------FRQGISMHCCVYKLGLLNNEIP 166
+ EA++ L++M G+ + FVSV+ C G +H ++KL + +
Sbjct: 82 EHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAV- 140
Query: 167 LANSVMSMYAK-FGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRM 225
++N ++SMY K G V A F +I + VSW +II Y G+ AF + + M+
Sbjct: 141 VSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYD 200
Query: 226 SVTPDLVVFLNLILGCAQVG--NLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLE 283
P F +L+ + ++ L + + KSG + + + LVS + K G L
Sbjct: 201 GSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLS 260
Query: 284 LARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLK-TSVRPNEATLATT---- 338
AR+VF+ + ++ ++ G + + EA LF + V P + +
Sbjct: 261 YARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPESYVILLSSFPE 320
Query: 339 LSACAELGSLSKGKEIEEYIVLNGL-ESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKD 397
S E+G L KG+E+ +++ GL + + L++M++KCG I A+ VF + DKD
Sbjct: 321 YSLAEEVG-LKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKD 379
Query: 398 LAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFF 457
W++MI G +G +A+ + M+ + L P + S LS+C+ G
Sbjct: 380 SVSWNSMITGLDQNGCFIEAVERYKSMRRHDIL-PGSFTLISSLSSCASLKWAKLGQQIH 438
Query: 458 -KSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSA 511
+S++ GI+ ++ L+ L G + K MP Q W ++ A
Sbjct: 439 GESLK--LGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVS-WNSIIGA 490
Score = 112 bits (281), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 78/307 (25%), Positives = 147/307 (47%), Gaps = 8/307 (2%)
Query: 137 VSVVSGCSFRQGIS--MHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGET 194
+S V C +G + H +YK L+ ++ L N++++ Y + G AR +FDE+
Sbjct: 7 LSFVQSCVGHRGAARFFHSRLYK-NRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLR 65
Query: 195 SIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGN--LFLALS 252
+ VSW I+ GY G EA M + + + F++++ C ++G+ +
Sbjct: 66 NCVSWACIVSGYSRNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQ 125
Query: 253 MHSLLLKSGYNNEDPLDNLLVSMYTKC-GDLELARRVFDAVLEKSVFLWTSMIGGYAQLG 311
+H L+ K Y + + N+L+SMY KC G + A F + K+ W S+I Y+Q G
Sbjct: 126 IHGLMFKLSYAVDAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAG 185
Query: 312 YPSEAVNLFKRLLKTSVRPNEATLATTLSACAELG--SLSKGKEIEEYIVLNGLESNRQV 369
A +F + RP E T + ++ L + ++I I +GL ++ V
Sbjct: 186 DQRSAFRIFSSMQYDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFV 245
Query: 370 QTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEG 429
+ L+ F+K G ++ A++VF ++ ++ + ++ G G++A LF M +
Sbjct: 246 GSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMID 305
Query: 430 LKPDAVV 436
+ P++ V
Sbjct: 306 VSPESYV 312
Score = 82.8 bits (203), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 108/217 (49%), Gaps = 7/217 (3%)
Query: 233 VFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAV 292
V L+ + C VG+ A HS L K+ + + L N L++ Y + GD AR+VFD +
Sbjct: 5 VPLSFVQSC--VGHRGAARFFHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEM 62
Query: 293 LEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSK-- 350
++ W ++ GY++ G EA+ + ++K + N+ + L AC E+GS+
Sbjct: 63 PLRNCVSWACIVSGYSRNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILF 122
Query: 351 GKEIEEYIVLNGLESNRQVQTSLIHMFSKC-GRINKAKEVFERVPDKDLAVWSAMINGYA 409
G++I + + V LI M+ KC G + A F + K+ W+++I+ Y+
Sbjct: 123 GRQIHGLMFKLSYAVDAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYS 182
Query: 410 IHGMGDQALNLFYKMQHVEGLKPDAVVYTSIL-SACS 445
G A +F MQ+ +G +P + S++ +ACS
Sbjct: 183 QAGDQRSAFRIFSSMQY-DGSRPTEYTFGSLVTTACS 218
Score = 77.0 bits (188), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 76/145 (52%), Gaps = 3/145 (2%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI +N + L MLQTG +SF + VL A A++ ++ G VH+ ++
Sbjct: 590 MISGYIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRAC 649
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
+ D V + L+DMYSKC + + + MPV R+ SWNS+IS ++R +EA+ +
Sbjct: 650 LESDVVVGSALVDMYSKCGRLDYALRFFNTMPV--RNSYSWNSMISGYARHGQGEEALKL 707
Query: 121 LKEMWVLG-LELSASTFVSVVSGCS 144
+ M + G TFV V+S CS
Sbjct: 708 FETMKLDGQTPPDHVTFVGVLSACS 732
>sp|Q9SX45|PPR75_ARATH Pentatricopeptide repeat-containing protein At1g50270
OS=Arabidopsis thaliana GN=PCMP-E42 PE=2 SV=1
Length = 596
Score = 325 bits (833), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 186/557 (33%), Positives = 313/557 (56%), Gaps = 15/557 (2%)
Query: 62 QQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRA-CLNDE-AIL 119
++D F+ L + + F +R++L ++ + S+ W+S+I S LN + L
Sbjct: 33 RRDLFLSRLLRRCCTAATQFRYARRLLCQL--QTLSIQLWDSLIGHFSGGITLNRRLSFL 90
Query: 120 VLKEMWVLGLELSASTFVSVVSGC-SFRQG--ISMHCCVYKLGLLNNEIPLANSVMSMYA 176
+ M G+ S TF ++ R H + K GL +++ + NS++S Y+
Sbjct: 91 AYRHMRRNGVIPSRHTFPPLLKAVFKLRDSNPFQFHAHIVKFGL-DSDPFVRNSLISGYS 149
Query: 177 KFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLN 236
G + A +FD + +V+WT +I G+V G+ +EA +M++ V + + ++
Sbjct: 150 SSGLFDFASRLFDGAEDKDVVTWTAMIDGFVRNGSASEAMVYFVEMKKTGVAANEMTVVS 209
Query: 237 LILGCAQVGNLFLALSMHSLLLKSGYNNEDP-LDNLLVSMYTKCGDLELARRVFDAVLEK 295
++ +V ++ S+H L L++G D + + LV MY KC + A++VFD + +
Sbjct: 210 VLKAAGKVEDVRFGRSVHGLYLETGRVKCDVFIGSSLVDMYGKCSCYDDAQKVFDEMPSR 269
Query: 296 SVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIE 355
+V WT++I GY Q + + +F+ +LK+ V PNE TL++ LSACA +G+L +G+ +
Sbjct: 270 NVVTWTALIAGYVQSRCFDKGMLVFEEMLKSDVAPNEKTLSSVLSACAHVGALHRGRRVH 329
Query: 356 EYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGD 415
Y++ N +E N T+LI ++ KCG + +A VFER+ +K++ W+AMING+A HG
Sbjct: 330 CYMIKNSIEINTTAGTTLIDLYVKCGCLEEAILVFERLHEKNVYTWTAMINGFAAHGYAR 389
Query: 416 QALNLFYKM--QHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHY 473
A +LFY M HV P+ V + ++LSAC+H G+V++G F SM+ F +EP +HY
Sbjct: 390 DAFDLFYTMLSSHVS---PNEVTFMAVLSACAHGGLVEEGRRLFLSMKGRFNMEPKADHY 446
Query: 474 LCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNP 533
C+VDL GR G + A I MP+E VW L +C+ H + ELG+YAA ++ L P
Sbjct: 447 ACMVDLFGRKGLLEEAKALIERMPMEPTNVVWGALFGSCLLHKDYELGKYAASRVIKLQP 506
Query: 534 GSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHH 593
+G Y L+ANL++ + W E A R M D+++ K PG+S +E+ G + F+A D
Sbjct: 507 SHSGRYTLLANLYSESQNWDEVARVRKQMKDQQVVKSPGFSWIEVKGKLCEFIAFDDKKP 566
Query: 594 L-SVDIRKTLKELHIKL 609
L S D+ KTL + +++
Sbjct: 567 LESDDLYKTLDTVGVQM 583
Score = 189 bits (480), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 121/419 (28%), Positives = 208/419 (49%), Gaps = 16/419 (3%)
Query: 18 YSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSK 77
Y M + GV + TFP +LKA + + + H+H++K G D FV+ LI YS
Sbjct: 92 YRHMRRNGVIPSRHTFPPLLKAVFKLRDS-NPFQFHAHIVKFGLDSDPFVRNSLISGYSS 150
Query: 78 CSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFV 137
F + ++ D + VV+W ++I R EA++ EM G+ + T V
Sbjct: 151 SGLFDFASRLFD--GAEDKDVVTWTAMIDGFVRNGSASEAMVYFVEMKKTGVAANEMTVV 208
Query: 138 SVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGE 193
SV+ R G S+H + G + ++ + +S++ MY K ++A+ +FDE+
Sbjct: 209 SVLKAAGKVEDVRFGRSVHGLYLETGRVKCDVFIGSSLVDMYGKCSCYDDAQKVFDEMPS 268
Query: 194 TSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSM 253
++V+WT +I GYV ++ + +M + V P+ +++ CA VG L +
Sbjct: 269 RNVVTWTALIAGYVQSRCFDKGMLVFEEMLKSDVAPNEKTLSSVLSACAHVGALHRGRRV 328
Query: 254 HSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYP 313
H ++K+ L+ +Y KCG LE A VF+ + EK+V+ WT+MI G+A GY
Sbjct: 329 HCYMIKNSIEINTTAGTTLIDLYVKCGCLEEAILVFERLHEKNVYTWTAMINGFAAHGYA 388
Query: 314 SEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNG---LESNRQVQ 370
+A +LF +L + V PNE T LSACA G + +G+ + ++ + G +E
Sbjct: 389 RDAFDLFYTMLSSHVSPNEVTFMAVLSACAHGGLVEEGRRL--FLSMKGRFNMEPKADHY 446
Query: 371 TSLIHMFSKCGRINKAKEVFERVP-DKDLAVWSAMINGYAIHG---MGDQALNLFYKMQ 425
++ +F + G + +AK + ER+P + VW A+ +H +G A + K+Q
Sbjct: 447 ACMVDLFGRKGLLEEAKALIERMPMEPTNVVWGALFGSCLLHKDYELGKYAASRVIKLQ 505
Score = 140 bits (353), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 94/319 (29%), Positives = 163/319 (51%), Gaps = 24/319 (7%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI NGS E + + M +TGV N T VLKA + + G+ VH L+ G
Sbjct: 175 MIDGFVRNGSASEAMVYFVEMKKTGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLYLETG 234
Query: 61 -FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAIL 119
+ D F+ + L+DMY KCS + ++KV DEMP R+VV+W ++I+ + ++ D+ +L
Sbjct: 235 RVKCDVFIGSSLVDMYGKCSCYDDAQKVFDEMPS--RNVVTWTALIAGYVQSRCFDKGML 292
Query: 120 VLKEMWVLGLELSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMY 175
V +EM + + T SV+S C + +G +HC + K + N +++ +Y
Sbjct: 293 VFEEMLKSDVAPNEKTLSSVLSACAHVGALHRGRRVHCYMIKNSIEINTTA-GTTLIDLY 351
Query: 176 AKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFL 235
K G + EA +F+ + E ++ +WT +I G+ G +AF L M V+P+ V F+
Sbjct: 352 VKCGCLEEAILVFERLHEKNVYTWTAMINGFAAHGYARDAFDLFYTMLSSHVSPNEVTFM 411
Query: 236 NLILGCAQVG------NLFLALSMHSLLLKSGYNNEDPLDNL--LVSMYTKCGDLELARR 287
++ CA G LFL+ +K +N E D+ +V ++ + G LE A+
Sbjct: 412 AVLSACAHGGLVEEGRRLFLS-------MKGRFNMEPKADHYACMVDLFGRKGLLEEAKA 464
Query: 288 VFDAV-LEKSVFLWTSMIG 305
+ + + +E + +W ++ G
Sbjct: 465 LIERMPMEPTNVVWGALFG 483
>sp|Q9LND4|PPR14_ARATH Pentatricopeptide repeat-containing protein At1g06140,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E61 PE=2
SV=1
Length = 558
Score = 325 bits (832), Expect = 8e-88, Method: Compositional matrix adjust.
Identities = 178/538 (33%), Positives = 303/538 (56%), Gaps = 13/538 (2%)
Query: 50 KRVHSHVLKVGFQQDAFVQTGLIDMYSKCS--DFVSSRKVLDEMPVRLRSVVSWNSIISA 107
++VH+ V+ GF+ + + + L + Y + + DF +S + +P R+ SWN+I+S
Sbjct: 24 QQVHAKVIIHGFEDEVVLGSSLTNAYIQSNRLDFATSS--FNRIPCWKRNRHSWNTILSG 81
Query: 108 HSRA--CLNDEAILVLKEMWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLL 161
+S++ C + +L+ M + + V + C GI +H K GL
Sbjct: 82 YSKSKTCCYSDVLLLYNRMRRHCDGVDSFNLVFAIKACVGLGLLENGILIHGLAMKNGLD 141
Query: 162 NNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQ 221
++ +A S++ MYA+ G + A+ +FDEI + V W ++ GY+ E F L
Sbjct: 142 KDDY-VAPSLVEMYAQLGTMESAQKVFDEIPVRNSVLWGVLMKGYLKYSKDPEVFRLFCL 200
Query: 222 MRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGY-NNEDPLDNLLVSMYTKCG 280
MR + D + + L+ C V + +H + ++ + + D L ++ MY KC
Sbjct: 201 MRDTGLALDALTLICLVKACGNVFAGKVGKCVHGVSIRRSFIDQSDYLQASIIDMYVKCR 260
Query: 281 DLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLS 340
L+ AR++F+ ++++V +WT++I G+A+ EA +LF+++L+ S+ PN+ TLA L
Sbjct: 261 LLDNARKLFETSVDRNVVMWTTLISGFAKCERAVEAFDLFRQMLRESILPNQCTLAAILV 320
Query: 341 ACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAV 400
+C+ LGSL GK + Y++ NG+E + TS I M+++CG I A+ VF+ +P++++
Sbjct: 321 SCSSLGSLRHGKSVHGYMIRNGIEMDAVNFTSFIDMYARCGNIQMARTVFDMMPERNVIS 380
Query: 401 WSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSM 460
WS+MIN + I+G+ ++AL+ F+KM+ + + P++V + S+LSACSHSG V +G F+SM
Sbjct: 381 WSSMINAFGINGLFEEALDCFHKMKS-QNVVPNSVTFVSLLSACSHSGNVKEGWKQFESM 439
Query: 461 QSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVEL 520
++G+ P EHY C+VDLLGRAG A I MPV+ A W LLSAC H V+L
Sbjct: 440 TRDYGVVPEEEHYACMVDLLGRAGEIGEAKSFIDNMPVKPMASAWGALLSACRIHKEVDL 499
Query: 521 GEYAAKNLLTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEI 578
A+ LL++ P + Y+L++N++ AGMW+ R M + K G S E+
Sbjct: 500 AGEIAEKLLSMEPEKSSVYVLLSNIYADAGMWEMVNCVRRKMGIKGYRKHVGQSATEV 557
Score = 191 bits (486), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 118/439 (26%), Positives = 217/439 (49%), Gaps = 8/439 (1%)
Query: 11 FEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTG 70
+ + L Y+ M + +SF +KAC + + +G +H +K G +D +V
Sbjct: 90 YSDVLLLYNRMRRHCDGVDSFNLVFAIKACVGLGLLENGILIHGLAMKNGLDKDDYVAPS 149
Query: 71 LIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLE 130
L++MY++ S++KV DE+PV R+ V W ++ + + + E + M GL
Sbjct: 150 LVEMYAQLGTMESAQKVFDEIPV--RNSVLWGVLMKGYLKYSKDPEVFRLFCLMRDTGLA 207
Query: 131 LSASTFVSVVSGC----SFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARS 186
L A T + +V C + + G +H + ++ L S++ MY K ++ AR
Sbjct: 208 LDALTLICLVKACGNVFAGKVGKCVHGVSIRRSFIDQSDYLQASIIDMYVKCRLLDNARK 267
Query: 187 IFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGN 246
+F+ + ++V WTT+I G+ EAF L QM R S+ P+ +++ C+ +G+
Sbjct: 268 LFETSVDRNVVMWTTLISGFAKCERAVEAFDLFRQMLRESILPNQCTLAAILVSCSSLGS 327
Query: 247 LFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGG 306
L S+H ++++G + + MY +CG++++AR VFD + E++V W+SMI
Sbjct: 328 LRHGKSVHGYMIRNGIEMDAVNFTSFIDMYARCGNIQMARTVFDMMPERNVISWSSMINA 387
Query: 307 YAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKG-KEIEEYIVLNGLES 365
+ G EA++ F ++ +V PN T + LSAC+ G++ +G K+ E G+
Sbjct: 388 FGINGLFEEALDCFHKMKSQNVVPNSVTFVSLLSACSHSGNVKEGWKQFESMTRDYGVVP 447
Query: 366 NRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLA-VWSAMINGYAIHGMGDQALNLFYKM 424
+ ++ + + G I +AK + +P K +A W A+++ IH D A + K+
Sbjct: 448 EEEHYACMVDLLGRAGEIGEAKSFIDNMPVKPMASAWGALLSACRIHKEVDLAGEIAEKL 507
Query: 425 QHVEGLKPDAVVYTSILSA 443
+E K V S + A
Sbjct: 508 LSMEPEKSSVYVLLSNIYA 526
Score = 46.6 bits (109), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 38/187 (20%), Positives = 91/187 (48%), Gaps = 19/187 (10%)
Query: 339 LSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVP--DK 396
L+ ++ +L+ +++ ++++G E + +SL + + + R++ A F R+P +
Sbjct: 11 LTILSQAKTLNHTQQVHAKVIIHGFEDEVVLGSSLTNAYIQSNRLDFATSSFNRIPCWKR 70
Query: 397 DLAVWSAMINGYAIHGMG--DQALNLFYKM-QHVEGLKPDAVVYTSILSACSHSGMVDD- 452
+ W+ +++GY+ L L+ +M +H +G+ +V+ + AC G++++
Sbjct: 71 NRHSWNTILSGYSKSKTCCYSDVLLLYNRMRRHCDGVDSFNLVFA--IKACVGLGLLENG 128
Query: 453 ----GLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPL 508
GL+ + + + PS LV++ + G + A K E+PV + +W L
Sbjct: 129 ILIHGLAMKNGLDKDDYVAPS------LVEMYAQLGTMESAQKVFDEIPVR-NSVLWGVL 181
Query: 509 LSACMKH 515
+ +K+
Sbjct: 182 MKGYLKY 188
Score = 43.9 bits (102), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 50/101 (49%), Gaps = 2/101 (1%)
Query: 8 NGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDG-KRVHSHVLKVGFQQDAF 66
NG FEE L + M V NS TF +L AC++ ++ +G K+ S G +
Sbjct: 391 NGLFEEALDCFHKMKSQNVVPNSVTFVSLLSACSHSGNVKEGWKQFESMTRDYGVVPEEE 450
Query: 67 VQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISA 107
++D+ + + ++ +D MPV+ + +W +++SA
Sbjct: 451 HYACMVDLLGRAGEIGEAKSFIDNMPVKPMA-SAWGALLSA 490
>sp|Q9LRV9|PP228_ARATH Pentatricopeptide repeat-containing protein At3g13880
OS=Arabidopsis thaliana GN=PCMP-E89 PE=2 SV=1
Length = 748
Score = 325 bits (832), Expect = 8e-88, Method: Compositional matrix adjust.
Identities = 187/617 (30%), Positives = 323/617 (52%), Gaps = 16/617 (2%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+I T G +E+ + + + + + FT+ L C + G+ +H V+ G
Sbjct: 119 LISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGALGFCGERCDLDLGELLHGLVVVNG 178
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
Q F+ LIDMYSKC + + D R VSWNS+IS + R +E + +
Sbjct: 179 LSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDER--DQVSWNSLISGYVRVGAAEEPLNL 236
Query: 121 LKEMWVLGLELSASTFVSVVSGCSF-------RQGISMHCCVYKLGLLNNEIPLANSVMS 173
L +M GL L+ SV+ C +G+++HC KLG+ +I + +++
Sbjct: 237 LAKMHRDGLNLTTYALGSVLKACCINLNEGFIEKGMAIHCYTAKLGM-EFDIVVRTALLD 295
Query: 174 MYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNV-----NEAFGLCNQMRRMSVT 228
MYAK G + EA +F + ++V++ +I G++ + + +EAF L M+R +
Sbjct: 296 MYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITDEASSEAFKLFMDMQRRGLE 355
Query: 229 PDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRV 288
P F ++ C+ L +H+L+ K+ + +++ + + L+ +Y G E +
Sbjct: 356 PSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEFIGSALIELYALMGSTEDGMQC 415
Query: 289 FDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSL 348
F + ++ + WTSMI + Q A +LF++L + +RP E T++ +SACA+ +L
Sbjct: 416 FASTSKQDIASWTSMIDCHVQNEQLESAFDLFRQLFSSHIRPEEYTVSLMMSACADFAAL 475
Query: 349 SKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGY 408
S G++I+ Y + +G+++ V+TS I M++K G + A +VF V + D+A +SAMI+
Sbjct: 476 SSGEQIQGYAIKSGIDAFTSVKTSSISMYAKSGNMPLANQVFIEVQNPDVATYSAMISSL 535
Query: 409 AIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEP 468
A HG ++ALN+F M+ G+KP+ + +L AC H G+V GL +F+ M++++ I P
Sbjct: 536 AQHGSANEALNIFESMK-THGIKPNQQAFLGVLIACCHGGLVTQGLKYFQCMKNDYRINP 594
Query: 469 SIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNL 528
+ +H+ CLVDLLGR GR A I + W LLS+C + + +G+ A+ L
Sbjct: 595 NEKHFTCLVDLLGRTGRLSDAENLILSSGFQDHPVTWRALLSSCRVYKDSVIGKRVAERL 654
Query: 529 LTLNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAG 588
+ L P ++G+Y+L+ N++ +G+ A R LM DR + KEP S + I F
Sbjct: 655 MELEPEASGSYVLLHNIYNDSGVNSSAEEVRELMRDRGVKKEPALSWIVIGNQTHSFAVA 714
Query: 589 DRSHHLSVDIRKTLKEL 605
D SH S I L+ +
Sbjct: 715 DLSHPSSQMIYTMLETM 731
Score = 174 bits (440), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 144/597 (24%), Positives = 270/597 (45%), Gaps = 62/597 (10%)
Query: 33 FPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMP 92
+ ++ + A S+ GK H H++K ++ L++MY KC + +R++ D MP
Sbjct: 50 YKILFQTAAKSGSVVLGKLAHGHMIKSSLNPCLYLLNNLLNMYCKCRELGFARQLFDRMP 109
Query: 93 VRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCSFRQGISMH 152
R+++S+NS+IS +++ ++A+ + E L+L T+ + C R + +
Sbjct: 110 E--RNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGALGFCGERCDLDLG 167
Query: 153 CCVYKLGLLN---NEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNV 209
++ L ++N ++ L N ++ MY+K GK+++A S+FD E VSW ++I GYV V
Sbjct: 168 ELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNSLISGYVRV 227
Query: 210 GNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCA---QVGNLFLALSMHSLLLKSGYNNED 266
G E L +M R + +++ C G + +++H K G +
Sbjct: 228 GAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEKGMAIHCYTAKLGMEFDI 287
Query: 267 PLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLG-----YPSEAVNLFK 321
+ L+ MY K G L+ A ++F + K+V + +MI G+ Q+ SEA LF
Sbjct: 288 VVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITDEASSEAFKLFM 347
Query: 322 RLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCG 381
+ + + P+ +T + L AC+ +L G++I I N +S+ + ++LI +++ G
Sbjct: 348 DMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEFIGSALIELYALMG 407
Query: 382 RINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSIL 441
+ F +D+A W++MI+ + + + A +LF ++ ++P+ + ++
Sbjct: 408 STEDGMQCFASTSKQDIASWTSMIDCHVQNEQLESAFDLFRQL-FSSHIRPEEYTVSLMM 466
Query: 442 SACSH-----SG------MVDDGLSFFKSMQSN----------------FGIE---PSIE 471
SAC+ SG + G+ F S++++ IE P +
Sbjct: 467 SACADFAALSSGEQIQGYAIKSGIDAFTSVKTSSISMYAKSGNMPLANQVFIEVQNPDVA 526
Query: 472 HYLCLVDLLGRAGRFDLALKTIHEMP---VEVQAQVWAPLLSACMKHHNVELG-EY--AA 525
Y ++ L + G + AL M ++ Q + +L AC V G +Y
Sbjct: 527 TYSAMISSLAQHGSANEALNIFESMKTHGIKPNQQAFLGVLIACCHGGLVTQGLKYFQCM 586
Query: 526 KNLLTLNP------------GSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKE 570
KN +NP G TG NL S+G T R L+ R+ K+
Sbjct: 587 KNDYRINPNEKHFTCLVDLLGRTGRLSDAENLILSSGFQDHPVTWRALLSSCRVYKD 643
Score = 129 bits (325), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 93/317 (29%), Positives = 162/317 (51%), Gaps = 12/317 (3%)
Query: 184 ARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQ 243
A++ F+ I + S+V T+I V +G LC + + D + L A+
Sbjct: 7 AKTFFNNIAQDSLV---TLITKRVGLG-YRFLSSLC---QPKNTALDSEGYKILFQTAAK 59
Query: 244 VGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSM 303
G++ L H ++KS N L N L++MY KC +L AR++FD + E+++ + S+
Sbjct: 60 SGSVVLGKLAHGHMIKSSLNPCLYLLNNLLNMYCKCRELGFARQLFDRMPERNIISFNSL 119
Query: 304 IGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGL 363
I GY Q+G+ +A+ LF + +++ ++ T A L C E L G+ + +V+NGL
Sbjct: 120 ISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGALGFCGERCDLDLGELLHGLVVVNGL 179
Query: 364 ESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYK 423
+ LI M+SKCG++++A +F+R ++D W+++I+GY G ++ LNL K
Sbjct: 180 SQQVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNSLISGYVRVGAAEEPLNLLAK 239
Query: 424 MQHVEGLKPDAVVYTSILSACS---HSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLL 480
M H +GL S+L AC + G ++ G++ + G+E I L+D+
Sbjct: 240 M-HRDGLNLTTYALGSVLKACCINLNEGFIEKGMA-IHCYTAKLGMEFDIVVRTALLDMY 297
Query: 481 GRAGRFDLALKTIHEMP 497
+ G A+K MP
Sbjct: 298 AKNGSLKEAIKLFSLMP 314
>sp|Q9C9I6|PP116_ARATH Pentatricopeptide repeat-containing protein At1g71490
OS=Arabidopsis thaliana GN=PCMP-E67 PE=2 SV=1
Length = 681
Score = 325 bits (832), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 187/601 (31%), Positives = 304/601 (50%), Gaps = 54/601 (8%)
Query: 36 VLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYS------KCSDFVSSRKVLD 89
+L AC ++ + G +VH+H + G + + + L+ YS + + + +L
Sbjct: 49 LLSACVDVRAFLAGVQVHAHCISSGVEYHSVLVPKLVTFYSAFNLHNEAQSIIENSDILH 108
Query: 90 EMPVRLRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFVSVVSGCSFRQGI 149
+P WN +I+++++ L +E I K M G+ A T+ SV+ C +
Sbjct: 109 PLP--------WNVLIASYAKNELFEEVIAAYKRMVSKGIRPDAFTYPSVLKACGETLDV 160
Query: 150 SMHCCVY---KLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTII--- 203
+ V+ ++ + + + N+++SMY +F + AR +FD + E VSW +I
Sbjct: 161 AFGRVVHGSIEVSSYKSSLYVCNALISMYKRFRNMGIARRLFDRMFERDAVSWNAVINCY 220
Query: 204 --------------------------------GGYVNVGNVNEAFGLCNQMRRMSVTPDL 231
GG + GN A GL ++MR + D
Sbjct: 221 ASEGMWSEAFELFDKMWFSGVEVSVITWNIISGGCLQTGNYVGALGLISRMRNFPTSLDP 280
Query: 232 VVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDA 291
V + + C+ +G + L +H L + S Y+ D + N L++MY+KC DL A VF
Sbjct: 281 VAMIIGLKACSLIGAIRLGKEIHGLAIHSSYDGIDNVRNTLITMYSKCKDLRHALIVFRQ 340
Query: 292 VLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKG 351
E S+ W S+I GYAQL EA +L + +L +PN TLA+ L CA + +L G
Sbjct: 341 TEENSLCTWNSIISGYAQLNKSEEASHLLREMLVAGFQPNSITLASILPLCARIANLQHG 400
Query: 352 KEIEEYIVLNG-LESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAI 410
KE YI+ + + SL+ +++K G+I AK+V + + +D ++++I+GY
Sbjct: 401 KEFHCYILRRKCFKDYTMLWNSLVDVYAKSGKIVAAKQVSDLMSKRDEVTYTSLIDGYGN 460
Query: 411 HGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSI 470
G G AL LF +M G+KPD V ++LSACSHS +V +G F MQ +GI P +
Sbjct: 461 QGEGGVALALFKEMTR-SGIKPDHVTVVAVLSACSHSKLVHEGERLFMKMQCEYGIRPCL 519
Query: 471 EHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLT 530
+H+ C+VDL GRAG A IH MP + WA LL+AC H N ++G++AA+ LL
Sbjct: 520 QHFSCMVDLYGRAGFLAKAKDIIHNMPYKPSGATWATLLNACHIHGNTQIGKWAAEKLLE 579
Query: 531 LNPGSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDR 590
+ P + G Y+L+AN++ +AG W + A R +M D + K+PG + ++ D +F GD
Sbjct: 580 MKPENPGYYVLIANMYAAAGSWSKLAEVRTIMRDLGVKKDPGCAWIDTDSGFSLFSVGDT 639
Query: 591 S 591
S
Sbjct: 640 S 640
Score = 169 bits (428), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 117/458 (25%), Positives = 215/458 (46%), Gaps = 53/458 (11%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
+I + N FEE ++ Y M+ G+ ++FT+P VLKAC + G+ VH +
Sbjct: 115 LIASYAKNELFEEVIAAYKRMVSKGIRPDAFTYPSVLKACGETLDVAFGRVVHGSIEVSS 174
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAILV 120
++ +V LI MY + + +R++ D M R VSWN++I+ ++ + EA +
Sbjct: 175 YKSSLYVCNALISMYKRFRNMGIARRLFDRM--FERDAVSWNAVINCYASEGMWSEAFEL 232
Query: 121 LKEMWVLGLELSASTFVSVVSGCSFRQG----------------ISMHCCVYKLGL---- 160
+MW G+E+S T+ +++SG + G S+ +GL
Sbjct: 233 FDKMWFSGVEVSVITW-NIISGGCLQTGNYVGALGLISRMRNFPTSLDPVAMIIGLKACS 291
Query: 161 ------LNNEIP-------------LANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTT 201
L EI + N++++MY+K + A +F + E S+ +W +
Sbjct: 292 LIGAIRLGKEIHGLAIHSSYDGIDNVRNTLITMYSKCKDLRHALIVFRQTEENSLCTWNS 351
Query: 202 IIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSG 261
II GY + EA L +M P+ + +++ CA++ NL H +L+
Sbjct: 352 IISGYAQLNKSEEASHLLREMLVAGFQPNSITLASILPLCARIANLQHGKEFHCYILRRK 411
Query: 262 -YNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLF 320
+ + L N LV +Y K G + A++V D + ++ +TS+I GY G A+ LF
Sbjct: 412 CFKDYTMLWNSLVDVYAKSGKIVAAKQVSDLMSKRDEVTYTSLIDGYGNQGEGGVALALF 471
Query: 321 KRLLKTSVRPNEATLATTLSACAELGSLSKGKEIE-----EYIVLNGLESNRQVQTSLIH 375
K + ++ ++P+ T+ LSAC+ + +G+ + EY G+ Q + ++
Sbjct: 472 KEMTRSGIKPDHVTVVAVLSACSHSKLVHEGERLFMKMQCEY----GIRPCLQHFSCMVD 527
Query: 376 MFSKCGRINKAKEVFERVPDKDL-AVWSAMINGYAIHG 412
++ + G + KAK++ +P K A W+ ++N IHG
Sbjct: 528 LYGRAGFLAKAKDIIHNMPYKPSGATWATLLNACHIHG 565
Score = 120 bits (300), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 94/407 (23%), Positives = 175/407 (42%), Gaps = 42/407 (10%)
Query: 127 LGLELSASTFVSVVSGCSFRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARS 186
L L +AS + V +F G+ +H G+ + + L +++ Y+ F NEA+S
Sbjct: 41 LVLHSAASLLSACVDVRAFLAGVQVHAHCISSGVEYHSV-LVPKLVTFYSAFNLHNEAQS 99
Query: 187 IFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGN 246
I + + W +I Y E +M + PD + +++ C + +
Sbjct: 100 IIENSDILHPLPWNVLIASYAKNELFEEVIAAYKRMVSKGIRPDAFTYPSVLKACGETLD 159
Query: 247 LFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGG 306
+ +H + S Y + + N L+SMY + ++ +ARR+FD + E+ W ++I
Sbjct: 160 VAFGRVVHGSIEVSSYKSSLYVCNALISMYKRFRNMGIARRLFDRMFERDAVSWNAVINC 219
Query: 307 YAQLGYPSEAVNLFKRL-------------------------------------LKTSVR 329
YA G SEA LF ++ TS+
Sbjct: 220 YASEGMWSEAFELFDKMWFSGVEVSVITWNIISGGCLQTGNYVGALGLISRMRNFPTSLD 279
Query: 330 PNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEV 389
P + L AC+ +G++ GKEI + + + V+ +LI M+SKC + A V
Sbjct: 280 P--VAMIIGLKACSLIGAIRLGKEIHGLAIHSSYDGIDNVRNTLITMYSKCKDLRHALIV 337
Query: 390 FERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGM 449
F + + L W+++I+GYA ++A +L +M V G +P+++ SIL C+
Sbjct: 338 FRQTEENSLCTWNSIISGYAQLNKSEEASHLLREML-VAGFQPNSITLASILPLCARIAN 396
Query: 450 VDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEM 496
+ G F + + + LVD+ ++G+ +A K + ++
Sbjct: 397 LQHGKEFHCYILRRKCFKDYTMLWNSLVDVYAKSGKI-VAAKQVSDL 442
Score = 89.7 bits (221), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 124/267 (46%), Gaps = 7/267 (2%)
Query: 203 IGGYVNVGNVNEAFGLCNQMRRMS---VTPDLVVF--LNLILGCAQVGNLFLALSMHSLL 257
+G + G++++AF + +R S V+ DLV+ +L+ C V + +H+
Sbjct: 10 LGHLASHGHLHDAFKTFSLLRLQSSSAVSDDLVLHSAASLLSACVDVRAFLAGVQVHAHC 69
Query: 258 LKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAV 317
+ SG L LV+ Y+ A+ + + W +I YA+ E +
Sbjct: 70 ISSGVEYHSVLVPKLVTFYSAFNLHNEAQSIIENSDILHPLPWNVLIASYAKNELFEEVI 129
Query: 318 NLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMF 377
+KR++ +RP+ T + L AC E ++ G+ + I ++ +S+ V +LI M+
Sbjct: 130 AAYKRMVSKGIRPDAFTYPSVLKACGETLDVAFGRVVHGSIEVSSYKSSLYVCNALISMY 189
Query: 378 SKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVY 437
+ + A+ +F+R+ ++D W+A+IN YA GM +A LF KM G++ + +
Sbjct: 190 KRFRNMGIARRLFDRMFERDAVSWNAVINCYASEGMWSEAFELFDKMW-FSGVEVSVITW 248
Query: 438 TSILSACSHSGMVDDGLSFFKSMQSNF 464
I C +G L M+ NF
Sbjct: 249 NIISGGCLQTGNYVGALGLISRMR-NF 274
>sp|Q9SHZ8|PP168_ARATH Pentatricopeptide repeat-containing protein At2g22070
OS=Arabidopsis thaliana GN=PCMP-H41 PE=3 SV=1
Length = 786
Score = 324 bits (831), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 212/684 (30%), Positives = 343/684 (50%), Gaps = 105/684 (15%)
Query: 35 LVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVR 94
L+ K+ N + + VH V+K G ++ L+++YSK + +RK+ DEMP
Sbjct: 19 LLQKSVNKSNGRFTAQLVHCRVIKSGLMFSVYLMNNLMNVYSKTGYALHARKLFDEMP-- 76
Query: 95 LRSVVSWNSIISAHSRACLND-------------------------------EAILVLKE 123
LR+ SWN+++SA+S+ D +AI V+ +
Sbjct: 77 LRTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGD 136
Query: 124 MWVLGLELSASTFVSVVSGCS----FRQGISMHCCVYKLGLLNNEIPLANSVMSMYAKFG 179
M G+E + T +V++ + G +H + KLGL N + ++NS+++MYAK G
Sbjct: 137 MVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGN-VSVSNSLLNMYAKCG 195
Query: 180 KVNEARSIFD-------------------------------EIGETSIVSWTTIIGGYVN 208
A+ +FD ++ E IV+W ++I G+
Sbjct: 196 DPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQ 255
Query: 209 VGNVNEAFGLCNQMRRMS-VTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDP 267
G A + ++M R S ++PD +++ CA + L + +HS ++ +G++
Sbjct: 256 RGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGI 315
Query: 268 LDNLLVSMYTKCGDLELARR---------------------------------VFDAVLE 294
+ N L+SMY++CG +E ARR +F ++ +
Sbjct: 316 VLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKD 375
Query: 295 KSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKGKEI 354
+ V WT+MI GY Q G EA+NLF+ ++ RPN TLA LS + L SLS GK+I
Sbjct: 376 RDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQI 435
Query: 355 EEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVP-DKDLAVWSAMINGYAIHGM 413
V +G + V +LI M++K G I A F+ + ++D W++MI A HG
Sbjct: 436 HGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGH 495
Query: 414 GDQALNLFYKMQHVEGLKPDAVVYTSILSACSHSGMVDDGLSFFKSMQSNFGIEPSIEHY 473
++AL LF M +EGL+PD + Y + SAC+H+G+V+ G +F M+ I P++ HY
Sbjct: 496 AEEALELFETML-MEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHY 554
Query: 474 LCLVDLLGRAGRFDLALKTIHEMPVEVQAQVWAPLLSACMKHHNVELGEYAAKNLLTLNP 533
C+VDL GRAG A + I +MP+E W LLSAC H N++LG+ AA+ LL L P
Sbjct: 555 ACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVHKNIDLGKVAAERLLLLEP 614
Query: 534 GSTGNYILMANLFTSAGMWKEAATARGLMDDRRLTKEPGWSQVEIDGSVQVFVAGDRSHH 593
++G Y +ANL+++ G W+EAA R M D R+ KE G+S +E+ V VF D +H
Sbjct: 615 ENSGAYSALANLYSACGKWEEAAKIRKSMKDGRVKKEQGFSWIEVKHKVHVFGVEDGTHP 674
Query: 594 LSVDIRKTLKELHIKLLEAGYIAE 617
+I T+K++ ++ + GY+ +
Sbjct: 675 EKNEIYMTMKKIWDEIKKMGYVPD 698
Score = 158 bits (399), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 122/486 (25%), Positives = 224/486 (46%), Gaps = 81/486 (16%)
Query: 1 MIRNSTNNGSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKVG 60
MI N G + + + M++ G+ FT VL + A + GK+VHS ++K+G
Sbjct: 117 MIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLG 176
Query: 61 FQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVR-------------------------- 94
+ + V L++MY+KC D + ++ V D M VR
Sbjct: 177 LRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFE 236
Query: 95 ---LRSVVSWNSIISAHSRACLNDEAILVLKEMWVLGLELSASTFV--SVVSGCSFRQ-- 147
R +V+WNS+IS ++ + A+ + +M L LS F SV+S C+ +
Sbjct: 237 QMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSL-LSPDRFTLASVLSACANLEKL 295
Query: 148 --GISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIG--ETSIVSWTTII 203
G +H + G + I L N+++SMY++ G V AR + ++ G + I +T ++
Sbjct: 296 CIGKQIHSHIVTTGFDISGIVL-NALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALL 354
Query: 204 GGYVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVG------NLFLAL------ 251
GY+ +G++N+A + ++ D+V + +I+G Q G NLF ++
Sbjct: 355 DGYIKLGDMNQAKNIFVSLK----DRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQR 410
Query: 252 -----------------------SMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRV 288
+H +KSG + N L++MY K G++ A R
Sbjct: 411 PNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRA 470
Query: 289 FDAV-LEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGS 347
FD + E+ WTSMI AQ G+ EA+ LF+ +L +RP+ T SAC G
Sbjct: 471 FDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGL 530
Query: 348 LSKGKEIEEYIV-LNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVP-DKDLAVWSAMI 405
+++G++ + + ++ + ++ +F + G + +A+E E++P + D+ W +++
Sbjct: 531 VNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLL 590
Query: 406 NGYAIH 411
+ +H
Sbjct: 591 SACRVH 596
Score = 107 bits (268), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 129/277 (46%), Gaps = 48/277 (17%)
Query: 218 LCNQMRRMSVTPDLVVFLNLILGCAQV--GNLFLALSMHSLL---LKSGYN-------NE 265
LC + + SV F ++ C + G +F M++L+ K+GY +E
Sbjct: 15 LCTNLLQKSVNKSNGRFTAQLVHCRVIKSGLMFSVYLMNNLMNVYSKTGYALHARKLFDE 74
Query: 266 DPLD-----NLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLF 320
PL N ++S Y+K GD++ FD + ++ WT+MI GY +G +A+ +
Sbjct: 75 MPLRTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVM 134
Query: 321 KRLLKTSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKC 380
++K + P + TL L++ A + GK++ +IV GL N V SL++M++KC
Sbjct: 135 GDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKC 194
Query: 381 GRINKAKEVFER-------------------------------VPDKDLAVWSAMINGYA 409
G AK VF+R + ++D+ W++MI+G+
Sbjct: 195 GDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFN 254
Query: 410 IHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACSH 446
G +AL++F KM L PD S+LSAC++
Sbjct: 255 QRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACAN 291
>sp|O64705|PP184_ARATH Pentatricopeptide repeat-containing protein At2g34400
OS=Arabidopsis thaliana GN=PCMP-E23 PE=3 SV=2
Length = 621
Score = 324 bits (831), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 196/564 (34%), Positives = 302/564 (53%), Gaps = 24/564 (4%)
Query: 33 FPLVLKACANINSIWDGKRVHSHVLKVGFQQDAFVQTGLIDMYSKCSDFVSSRKVLD--E 90
F +LK C ++N + +++ + +L ++ F LI + DF S + E
Sbjct: 40 FLFLLKKCISVNQL---RQIQAQMLLHSVEKPNF----LIPKAVELGDFNYSSFLFSVTE 92
Query: 91 MPVRLRSVVSWNSIISAHSRACLNDEAILVL-KEMWVLGLELSASTFVSVVSGCSFRQ-- 147
P + S+N +I + + EA L L + M GL+ T+ V C+ +
Sbjct: 93 EP----NHYSFNYMIRGLTNTWNDHEAALSLYRRMKFSGLKPDKFTYNFVFIACAKLEEI 148
Query: 148 --GISMHCCVYKLGLLNNEIPLANSVMSMYAKFGKVNEARSIFDEIGETSIVSWTTIIGG 205
G S+H ++K+GL ++ + +S++ MYAK G+V AR +FDEI E VSW ++I G
Sbjct: 149 GVGRSVHSSLFKVGL-ERDVHINHSLIMMYAKCGQVGYARKLFDEITERDTVSWNSMISG 207
Query: 206 YVNVGNVNEAFGLCNQMRRMSVTPDLVVFLNLILGCAQVGNLFLALSMHSLLLKSGYNNE 265
Y G +A L +M PD ++++ C+ +G+L + + +
Sbjct: 208 YSEAGYAKDAMDLFRKMEEEGFEPDERTLVSMLGACSHLGDLRTGRLLEEMAITKKIGLS 267
Query: 266 DPLDNLLVSMYTKCGDLELARRVFDAVLEKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLK 325
L + L+SMY KCGDL+ ARRVF+ +++K WT+MI Y+Q G SEA LF + K
Sbjct: 268 TFLGSKLISMYGKCGDLDSARRVFNQMIKKDRVAWTAMITVYSQNGKSSEAFKLFFEMEK 327
Query: 326 TSVRPNEATLATTLSACAELGSLSKGKEIEEYIVLNGLESNRQVQTSLIHMFSKCGRINK 385
T V P+ TL+T LSAC +G+L GK+IE + L+ N V T L+ M+ KCGR+ +
Sbjct: 328 TGVSPDAGTLSTVLSACGSVGALELGKQIETHASELSLQHNIYVATGLVDMYGKCGRVEE 387
Query: 386 AKEVFERVPDKDLAVWSAMINGYAIHGMGDQALNLFYKMQHVEGLKPDAVVYTSILSACS 445
A VFE +P K+ A W+AMI YA G +AL LF +M + P + + +LSAC
Sbjct: 388 ALRVFEAMPVKNEATWNAMITAYAHQGHAKEALLLFDRMS----VPPSDITFIGVLSACV 443
Query: 446 HSGMVDDGLSFFKSMQSNFGIEPSIEHYLCLVDLLGRAGRFDLALKTIHEMPVEVQAQVW 505
H+G+V G +F M S FG+ P IEHY ++DLL RAG D A + + P + +
Sbjct: 444 HAGLVHQGCRYFHEMSSMFGLVPKIEHYTNIIDLLSRAGMLDEAWEFMERFPGKPDEIML 503
Query: 506 APLLSACMKHHNVELGEYAAKNLLTLNPG-STGNYILMANLFTSAGMWKEAATARGLMDD 564
A +L AC K +V + E A + L+ + + GNY++ +N+ MW E+A R LM D
Sbjct: 504 AAILGACHKRKDVAIREKAMRMLMEMKEAKNAGNYVISSNVLADMKMWDESAKMRALMRD 563
Query: 565 RRLTKEPGWSQVEIDGSVQVFVAG 588
R + K PG S +EI+G + F+AG
Sbjct: 564 RGVVKTPGCSWIEIEGELMEFLAG 587
Score = 209 bits (533), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 143/427 (33%), Positives = 215/427 (50%), Gaps = 17/427 (3%)
Query: 1 MIRNSTNN-GSFEETLSTYSSMLQTGVHGNSFTFPLVLKACANINSIWDGKRVHSHVLKV 59
MIR TN E LS Y M +G+ + FT+ V ACA + I G+ VHS + KV
Sbjct: 102 MIRGLTNTWNDHEAALSLYRRMKFSGLKPDKFTYNFVFIACAKLEEIGVGRSVHSSLFKV 161
Query: 60 GFQQDAFVQTGLIDMYSKCSDFVSSRKVLDEMPVRLRSVVSWNSIISAHSRACLNDEAIL 119
G ++D + LI MY+KC +RK+ DE + R VSWNS+IS +S A +A+
Sbjct: 162 GLERDVHINHSLIMMYAKCGQVGYARKLFDE--ITERDTVSWNSMISGYSEAGYAKDAMD 219
Query: 120 VLKEMWVLGLELSASTFVSVVSGCS----FRQG--ISMHCCVYKLGLLNNEIPLANSVMS 173
+ ++M G E T VS++ CS R G + K+GL L + ++S
Sbjct: 220 LFRKMEEEGFEPDERTLVSMLGACSHLGDLRTGRLLEEMAITKKIGL---STFLGSKLIS 276
Query: 174 MYAKFGKVNEARSIFDEIGETSIVSWTTIIGGYVNVGNVNEAFGLCNQMRRMSVTPDLVV 233
MY K G ++ AR +F+++ + V+WT +I Y G +EAF L +M + V+PD
Sbjct: 277 MYGKCGDLDSARRVFNQMIKKDRVAWTAMITVYSQNGKSSEAFKLFFEMEKTGVSPDAGT 336
Query: 234 FLNLILGCAQVGNLFLALSMHSLLLKSGYNNEDPLDNLLVSMYTKCGDLELARRVFDAVL 293
++ C VG L L + + + + + LV MY KCG +E A RVF+A+
Sbjct: 337 LSTVLSACGSVGALELGKQIETHASELSLQHNIYVATGLVDMYGKCGRVEEALRVFEAMP 396
Query: 294 EKSVFLWTSMIGGYAQLGYPSEAVNLFKRLLKTSVRPNEATLATTLSACAELGSLSKG-K 352
K+ W +MI YA G+ EA+ LF R+ SV P++ T LSAC G + +G +
Sbjct: 397 VKNEATWNAMITAYAHQGHAKEALLLFDRM---SVPPSDITFIGVLSACVHAGLVHQGCR 453
Query: 353 EIEEYIVLNGLESNRQVQTSLIHMFSKCGRINKAKEVFERVPDKDLAVWSAMINGYAIHG 412
E + GL + T++I + S+ G +++A E ER P K + A I G A H
Sbjct: 454 YFHEMSSMFGLVPKIEHYTNIIDLLSRAGMLDEAWEFMERFPGKPDEIMLAAILG-ACHK 512
Query: 413 MGDQALN 419
D A+
Sbjct: 513 RKDVAIR 519
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.134 0.397
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 217,689,875
Number of Sequences: 539616
Number of extensions: 8651823
Number of successful extensions: 29273
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 380
Number of HSP's successfully gapped in prelim test: 79
Number of HSP's that attempted gapping in prelim test: 20613
Number of HSP's gapped (non-prelim): 2312
length of query: 622
length of database: 191,569,459
effective HSP length: 124
effective length of query: 498
effective length of database: 124,657,075
effective search space: 62079223350
effective search space used: 62079223350
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 64 (29.3 bits)