BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 006999
(622 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2IUK|A Chain A, Crystal Structure Of Soybean Lipoxygenase-D
pdb|2IUK|B Chain B, Crystal Structure Of Soybean Lipoxygenase-D
Length = 864
Score = 571 bits (1472), Expect = e-163, Method: Compositional matrix adjust.
Identities = 297/619 (47%), Positives = 395/619 (63%), Gaps = 15/619 (2%)
Query: 11 SEKREGNFYVPRDEAFSEVKQLTFSAKTVYSVLHALVPSLETAFVDPDLG---FPYFSAI 67
+ ++ G YVPRDE F +K F + S+ H ++P ++A + F F +
Sbjct: 254 NSEKPGEVYVPRDENFGHLKSSDFLTYGIKSLSHDVIPLFKSAIFQLRVTSSEFESFEDV 313
Query: 68 DALFNEGVNLPP--LKQEGFWNTLLPRLVKAIEDTGDNILLFETPETMDRDKFFWFRDEE 125
+L+ G+ LP L Q + LP L + G+N+L F P K DEE
Sbjct: 314 RSLYEGGIKLPTDILSQI----SPLPALKEIFRTDGENVLQFPPPHVAKVSKSGVMTDEE 369
Query: 126 FSRQTLAGLNPYSIRLITEWPLKSTLDPEIYGPPESAITTELIEKEIGGMISVEEAIKQK 185
F+R+ +AG+NP IR + E+P KSTLDP +YG S IT E +E +GG ++VEEA+ +
Sbjct: 370 FAREVIAGVNPNVIRRLQEFPPKSTLDPTLYGDQTSTITKEQLEINMGG-VTVEEALSTQ 428
Query: 186 KLFILDYHDLFLPYVEKVRQLKSTTLYGSRTIFFLTPAGTLRPIAIELTRPPMNGKPQWK 245
+LFILDY D F+PY+ ++ L + Y +RTI FL GTL+P+AIEL++P +G
Sbjct: 429 RLFILDYQDAFIPYLTRINSLPTAKAYATRTILFLKDDGTLKPLAIELSKPHPDGDNLGP 488
Query: 246 Q--VFLPSWHSTECWLWKLAKAHVLAHDAGYHQLVSHWLRTHCCTEPYVIATNRQLSVMH 303
+ V LP+ + +W LAKAHV+ +D+GYHQLVSHWL TH EP+ IATNR LSV+H
Sbjct: 489 ESIVVLPATEGVDSTIWLLAKAHVIVNDSGYHQLVSHWLNTHAVMEPFAIATNRHLSVLH 548
Query: 304 PIYRLLDPHFRYTMEINGLARQALVNADGIIESSFSPGKYSMEFSSVAYDKQWRFDHEAL 363
PIY+LL PH+R T+ INGLARQ+L+NADGIIE SF PGKYS+E SS Y K W F H+AL
Sbjct: 549 PIYKLLYPHYRDTININGLARQSLINADGIIEKSFLPGKYSIEMSSSVY-KNWVFTHQAL 607
Query: 364 PKDLISRGLAVEDPSAPHGLKLTIEDYPFANDGLDLWDAIKQWVTDYVNHYYPDKSLVES 423
P DL+ RGLA+EDPSAPHGL+L IEDYP+A DGL++WDAIK WV +YV+ YYP + V+
Sbjct: 608 PADLVKRGLAIEDPSAPHGLRLVIEDYPYAVDGLEIWDAIKTWVHEYVSLYYPTDAAVQQ 667
Query: 424 DEELQAWWTEIRTVGHGDKKHEPWWPVLKTPKDLIEIITTIVWVTSGHHAAVNFGQYTYG 483
D ELQAWW E GHGD K +PWWP +T +DLI+ + IVW S HAAVNFGQY YG
Sbjct: 668 DTELQAWWKEAVEKGHGDLKEKPWWPKKQTTEDLIQSCSIIVWTASALHAAVNFGQYPYG 727
Query: 484 GYFPNRPTTARCNIATEDPSDEQWKFFLEKPENALLNTFPSQIQATKVMAILDVLSTHSP 543
G NRPT AR I E ++ ++ P+ A L T + + ++++++LS H+
Sbjct: 728 GLILNRPTLARRFIPAE--GTPEYDEMVKNPQKAYLRTITPKFETLIDLSVIEILSRHAS 785
Query: 544 DEEYLGKEIEPAWREDPVINAAFEKFRGKLMELEGIIDARNADPKLRNRNGAGMVPYELL 603
DE YLG+ P W D AF++F KL +EG I+ARN+DP LRNR G +PY LL
Sbjct: 786 DEIYLGERETPNWTTDKKALEAFKRFGSKLTGIEGKINARNSDPSLRNRTGPVQLPYTLL 845
Query: 604 KPFSEPGVTGKGVPYSISI 622
SE G+T KG+P SISI
Sbjct: 846 HRSSEEGLTFKGIPNSISI 864
>pdb|1IK3|A Chain A, Lipoxygenase-3 (Soybean) Complex With 13(S)-Hydroperoxy-
9(Z),11(E)-Octadecadienoic Acid
pdb|1HU9|A Chain A, Lipoxygenase-3 (Soybean) Complex With 4-Hydroperoxy-2-
Methoxy-Phenol
pdb|1JNQ|A Chain A, Lipoxygenase-3 (Soybean) Complex With Epigallocathechin
(Egc)
pdb|1N8Q|A Chain A, Lipoxygenase In Complex With Protocatechuic Acid
pdb|1NO3|A Chain A, Refined Structure Of Soybean Lipoxygenase-3 With
4-nitrocatechol At 2.15 Angstrom Resolution
pdb|1RRH|A Chain A, Soybean Lipoxygenase (Lox-3) At Ambient Temperatures At
2.0 A Resolution
pdb|1RRL|A Chain A, Soybean Lipoxygenase (Lox-3) At 93k At 2.0 A Resolution
pdb|1RRL|B Chain B, Soybean Lipoxygenase (Lox-3) At 93k At 2.0 A Resolution
pdb|1LNH|A Chain A, Lipoxygenase-3(Soybean) Non-Heme Fe(Ii) Metalloprotein
Length = 857
Score = 536 bits (1381), Expect = e-152, Method: Compositional matrix adjust.
Identities = 283/622 (45%), Positives = 388/622 (62%), Gaps = 17/622 (2%)
Query: 8 DQFSEKREGNFYVPRDEAFSEVKQLTFSAKTVYSVLHALVPSLETAFVDPDLGFP----- 62
D SE R + Y+PRDEAF +K F + SV ++P L++AF DL F
Sbjct: 246 DPNSESRSNDVYLPRDEAFGHLKSSDFLTYGLKSVSQNVLPLLQSAF---DLNFTPREFD 302
Query: 63 YFSAIDALFNEGVNLPPLKQEGFWNTLLPRLVKAIEDTGDNILLFETPETMDRDKFFWFR 122
F + L++ G+ LP + LP L + G+ L F P+ + K W
Sbjct: 303 SFDEVHGLYSGGIKLPTDIISKI--SPLPVLKEIFRTDGEQALKFPPPKVIQVSKSAWMT 360
Query: 123 DEEFSRQTLAGLNPYSIRLITEWPLKSTLDPEIYGPPESAITTELIEKEIGGMISVEEAI 182
DEEF+R+ LAG+NP IR + ++P +S LD ++YG S IT E +E + G+ +V+EAI
Sbjct: 361 DEEFAREMLAGVNPNLIRCLKDFPPRSKLDSQVYGDHTSQITKEHLEPNLEGL-TVDEAI 419
Query: 183 KQKKLFILDYHDLFLPYVEKVRQLKSTTLYGSRTIFFLTPAGTLRPIAIELTRPPMNGKP 242
+ K+LF+LD+HD +PY+ ++ ST Y +RTI FL GTLRP+AIEL+ P G
Sbjct: 420 QNKRLFLLDHHDPIMPYLRRINA-TSTKAYATRTILFLKNDGTLRPLAIELSLPHPQGDQ 478
Query: 243 Q--WKQVFLPSWHSTECWLWKLAKAHVLAHDAGYHQLVSHWLRTHCCTEPYVIATNRQLS 300
+ QVFLP+ E +W LAKA+V+ +D+ YHQLVSHWL TH EP++IATNR LS
Sbjct: 479 SGAFSQVFLPADEGVESSIWLLAKAYVVVNDSCYHQLVSHWLNTHAVVEPFIIATNRHLS 538
Query: 301 VMHPIYRLLDPHFRYTMEINGLARQALVNADGIIESSFSPGKYSMEFSSVAYDKQWRFDH 360
V+HPIY+LL PH+R TM INGLAR +LVN G+IE +F G+YS+E S+V Y K W F
Sbjct: 539 VVHPIYKLLHPHYRDTMNINGLARLSLVNDGGVIEQTFLWGRYSVEMSAVVY-KDWVFTD 597
Query: 361 EALPKDLISRGLAVEDPSAPHGLKLTIEDYPFANDGLDLWDAIKQWVTDYVNHYYPDKSL 420
+ALP DLI RG+A+EDPS PHG++L IEDYP+ DGL++WDAIK WV +YV YY
Sbjct: 598 QALPADLIKRGMAIEDPSCPHGIRLVIEDYPYTVDGLEIWDAIKTWVHEYVFLYYKSDDT 657
Query: 421 VESDEELQAWWTEIRTVGHGDKKHEPWWPVLKTPKDLIEIITTIVWVTSGHHAAVNFGQY 480
+ D ELQA W E+ VGHGDKK+EPWWP ++T ++L+E I+W S HAAVNFGQY
Sbjct: 658 LREDPELQACWKELVEVGHGDKKNEPWWPKMQTREELVEACAIIIWTASALHAAVNFGQY 717
Query: 481 TYGGYFPNRPTTARCNIATEDPSDEQWKFFLEKPENALLNTFPSQIQATKVMAILDVLST 540
YGG NRPT +R + + +++ + P+ A L T + Q ++++++LS
Sbjct: 718 PYGGLILNRPTLSRRFMP--EKGSAEYEELRKNPQKAYLKTITPKFQTLIDLSVIEILSR 775
Query: 541 HSPDEEYLGKEIEPAWREDPVINAAFEKFRGKLMELEGIIDARNADPKLRNRNGAGMVPY 600
H+ DE YLG+ P W D AF++F KL ++E + RN D KLRNR G +PY
Sbjct: 776 HASDEVYLGERDNPNWTSDTRALEAFKRFGNKLAQIENKLSERNNDEKLRNRCGPVQMPY 835
Query: 601 ELLKPFSEPGVTGKGVPYSISI 622
LL P S+ G+T +G+P SISI
Sbjct: 836 TLLLPSSKEGLTFRGIPNSISI 857
>pdb|2IUJ|A Chain A, Crystal Structure Of Soybean Lipoxygenase-B
Length = 853
Score = 535 bits (1379), Expect = e-152, Method: Compositional matrix adjust.
Identities = 286/622 (45%), Positives = 393/622 (63%), Gaps = 16/622 (2%)
Query: 8 DQFSEKREGNFYVPRDEAFSEVKQLTFSAKTVYSVLHALVPSLETAFVDP--DLGFPYFS 65
D SEK Y+PRDEAF +K F A + SV ++P L AF L F F+
Sbjct: 241 DPNSEKPGDFVYLPRDEAFGHLKSSDFLAYGIKSVAQDVLPVLTDAFDGNLLSLDFDNFA 300
Query: 66 AIDALFNEGVNLPPLKQEGFWNTL--LPRLVKAIEDTGDNILLFETPETMDRDKFFWFRD 123
+ L+ GV LP F + + +P + + G+ L + P+ M DK W D
Sbjct: 301 EVRKLYEGGVTLP----TNFLSNITPIPIIKELFRTDGEQFLKYPPPKVMQVDKSAWMTD 356
Query: 124 EEFSRQTLAGLNPYSIRLITEWPLKSTLDPEIYGPPESAITTELIEKEIGGMISVEEAIK 183
EEF+R+T+AGLNP I++I E+PL S LD + YG IT E +E +GG+ +VE+AI+
Sbjct: 357 EEFARETIAGLNPNVIKIIEEFPLSSKLDTQAYGDHTCIITKEHLEPNLGGL-TVEQAIQ 415
Query: 184 QKKLFILDYHDLFLPYVEKVRQLKSTTLYGSRTIFFLTPAGTLRPIAIELTRPPMNGKPQ 243
KKLFILD+HD +PY+ K+ +T Y +RTIFFL GTL P+AIEL++P G+
Sbjct: 416 NKKLFILDHHDYLIPYLRKINA-NTTKTYATRTIFFLKNDGTLTPLAIELSKPHPQGEEY 474
Query: 244 W--KQVFLPSWHSTECWLWKLAKAHVLAHDAGYHQLVSHWLRTHCCTEPYVIATNRQLSV 301
+V++PS E ++W LAKA+V+ +DA YHQ++SHWL TH EP+VIATNR LSV
Sbjct: 475 GPVSEVYVPSSEGVEAYIWLLAKAYVVVNDACYHQIISHWLNTHAVVEPFVIATNRHLSV 534
Query: 302 MHPIYRLLDPHFRYTMEINGLARQALVNADGIIESSFSPGKYSMEFSSVAYDKQWRFDHE 361
+HPIY+LL PH+R TM IN LAR++LVNADGIIE +F G+YS+E S+V Y K W F +
Sbjct: 535 VHPIYKLLFPHYRDTMNINSLARKSLVNADGIIEKTFLWGRYSLEMSAVIY-KDWVFTDQ 593
Query: 362 ALPKDLISRGLAVEDPSAPHGLKLTIEDYPFANDGLDLWDAIKQWVTDYVNHYYPDKSLV 421
ALP DL+ RG+AV+DPSAPHG++L IEDYP+A+DGL++WDAIK WV +YV+ YY +
Sbjct: 594 ALPNDLVKRGVAVKDPSAPHGVRLLIEDYPYASDGLEIWDAIKSWVEEYVSFYYKSDEEL 653
Query: 422 ESDEELQAWWTEIRTVGHGDKKHEPWWPVLKTPKDLIEIITTIVWVTSGHHAAVNFGQYT 481
+ D ELQAWW E+ VGHGD K +PWW ++T ++L+E T++W+ S HAAVNFGQY
Sbjct: 654 QKDPELQAWWKELVEVGHGDLKDKPWWQKMQTREELVEASATLIWIASALHAAVNFGQYP 713
Query: 482 YGGYFPNRPTTARCNIATEDPSDEQWKFFLEKPENALLNTFPSQIQATKVMAILDVLSTH 541
YGG NRPT +R + + ++ + PE L T + + + I+++LS H
Sbjct: 714 YGGLILNRPTISRRFMP--EKGSPEYDALAKNPEKEFLKTITGKKETLIDLTIIEILSRH 771
Query: 542 SPDEEYLG-KEIEPAWREDPVINAAFEKFRGKLMELEGIIDARNADPKLRNRNGAGMVPY 600
+ DE YLG ++ W D AF++F L E+E + +N D LRNR G +PY
Sbjct: 772 ASDEFYLGQRDGGDYWTSDAGPLEAFKRFGKNLEEIEKKLIEKNNDETLRNRYGPAKMPY 831
Query: 601 ELLKPFSEPGVTGKGVPYSISI 622
LL P SE G+T +G+P SISI
Sbjct: 832 TLLYPSSEEGLTFRGIPNSISI 853
>pdb|1ROV|A Chain A, Lipoxygenase-3 Treated With Cumene Hydroperoxide
Length = 857
Score = 530 bits (1364), Expect = e-150, Method: Compositional matrix adjust.
Identities = 281/622 (45%), Positives = 386/622 (62%), Gaps = 17/622 (2%)
Query: 8 DQFSEKREGNFYVPRDEAFSEVKQLTFSAKTVYSVLHALVPSLETAFVDPDLGFP----- 62
D SE R + Y+PRDEAF +K F + SV ++P L++AF DL F
Sbjct: 246 DPNSESRSNDVYLPRDEAFGHLKSSDFLTYGLKSVSQNVLPLLQSAF---DLNFTPREFD 302
Query: 63 YFSAIDALFNEGVNLPPLKQEGFWNTLLPRLVKAIEDTGDNILLFETPETMDRDKFFWFR 122
F + L++ G+ LP + LP L + G+ L F P+ + K W
Sbjct: 303 SFDEVHGLYSGGIKLPTDIISKI--SPLPVLKEIFRTDGEQALKFPPPKVIQVSKSAWMT 360
Query: 123 DEEFSRQTLAGLNPYSIRLITEWPLKSTLDPEIYGPPESAITTELIEKEIGGMISVEEAI 182
DEEF+R+ LAG+NP IR + ++P +S LD ++YG S IT E +E + G+ +V+EAI
Sbjct: 361 DEEFAREMLAGVNPNLIRCLKDFPPRSKLDSQVYGDHTSQITKEHLEPNLEGL-TVDEAI 419
Query: 183 KQKKLFILDYHDLFLPYVEKVRQLKSTTLYGSRTIFFLTPAGTLRPIAIELTRPPMNGKP 242
+ K+LF+LD+HD +PY+ ++ ST Y +RTI FL GTLRP+AIEL+ P G
Sbjct: 420 QNKRLFLLDHHDPIMPYLRRINA-TSTKAYATRTILFLKNDGTLRPLAIELSLPHPQGDQ 478
Query: 243 Q--WKQVFLPSWHSTECWLWKLAKAHVLAHDAGYHQLVSHWLRTHCCTEPYVIATNRQLS 300
+ QVFLP+ E +W LAKA+V+ +D+ YHQLVSH L TH EP++IATNR LS
Sbjct: 479 SGAFSQVFLPADEGVESSIWLLAKAYVVVNDSCYHQLVSHXLNTHAVVEPFIIATNRHLS 538
Query: 301 VMHPIYRLLDPHFRYTMEINGLARQALVNADGIIESSFSPGKYSMEFSSVAYDKQWRFDH 360
V+HPIY+LL PH+R TM INGLAR + VN G+IE +F G+YS+E S+V Y K W F
Sbjct: 539 VVHPIYKLLHPHYRDTMNINGLARLSXVNDGGVIEQTFLWGRYSVEMSAVVY-KDWVFTD 597
Query: 361 EALPKDLISRGLAVEDPSAPHGLKLTIEDYPFANDGLDLWDAIKQWVTDYVNHYYPDKSL 420
+ALP DLI RG+A+EDPS PHG++L IEDYP+ DGL++WDAIK WV +YV YY
Sbjct: 598 QALPADLIKRGMAIEDPSCPHGIRLVIEDYPYTVDGLEIWDAIKTWVHEYVFLYYKSDDT 657
Query: 421 VESDEELQAWWTEIRTVGHGDKKHEPWWPVLKTPKDLIEIITTIVWVTSGHHAAVNFGQY 480
+ D ELQA W E+ VGHGDKK+EPWWP ++T ++L+E I+W S HAAVNFGQY
Sbjct: 658 LREDPELQACWKELVEVGHGDKKNEPWWPKMQTREELVEACAIIIWTASALHAAVNFGQY 717
Query: 481 TYGGYFPNRPTTARCNIATEDPSDEQWKFFLEKPENALLNTFPSQIQATKVMAILDVLST 540
YGG NRPT +R + + +++ + P+ A L T + Q ++++++LS
Sbjct: 718 PYGGLILNRPTLSRRFMP--EKGSAEYEELRKNPQKAYLKTITPKFQTLIDLSVIEILSR 775
Query: 541 HSPDEEYLGKEIEPAWREDPVINAAFEKFRGKLMELEGIIDARNADPKLRNRNGAGMVPY 600
H+ DE YLG+ P W D AF++F KL ++E + RN D KLRNR G +PY
Sbjct: 776 HASDEVYLGERDNPNWTSDTRALEAFKRFGNKLAQIENKLSERNNDEKLRNRCGPVQMPY 835
Query: 601 ELLKPFSEPGVTGKGVPYSISI 622
LL P S+ G+T +G+P SISI
Sbjct: 836 TLLLPSSKEGLTFRGIPNSISI 857
>pdb|3PZW|A Chain A, Soybean Lipoxygenase-1 - Re-Refinement
Length = 839
Score = 527 bits (1358), Expect = e-150, Method: Compositional matrix adjust.
Identities = 280/622 (45%), Positives = 387/622 (62%), Gaps = 17/622 (2%)
Query: 8 DQFSEKREGNFYVPRDEAFSEVKQLTFSAKTVYSVLHALVPSLETAF--VDPDLGFPYFS 65
D +EK+ FYVPRDE +K S+ + P+ E+AF + F F
Sbjct: 228 DPNTEKQGEVFYVPRDENLGHLKSKDALEIGTKSLSQIVQPAFESAFDLKSTPIEFHSFQ 287
Query: 66 AIDALFNEGVNLPPLKQEGFWNTLLPR-LVKAIEDT-GDNILLFETPETMDRDKFFWFRD 123
+ L+ G+ LP +T++P ++K + T G +IL F P + + W D
Sbjct: 288 DVHDLYEGGIKLP----RDVISTIIPLPVIKELYRTDGQHILKFPQPHVVQVSQSAWMTD 343
Query: 124 EEFSRQTLAGLNPYSIRLITEWPLKSTLDPEIYGPPESAITTELIEKEIGGMISVEEAIK 183
EEF+R+ +AG+NP IR + E+P KS LDP IYG S IT + ++ + +++EA+
Sbjct: 344 EEFAREMIAGVNPCVIRGLEEFPPKSNLDPAIYGDQSSKITADSLDLD---GYTMDEALG 400
Query: 184 QKKLFILDYHDLFLPYVEKVRQLKSTTLYGSRTIFFLTPAGTLRPIAIELTRPPMNG--K 241
++LF+LDYHD+F+PYV ++ QL S Y +RTI FL GTL+P+AIEL+ P G
Sbjct: 401 SRRLFMLDYHDIFMPYVRQINQLNSAKTYATRTILFLREDGTLKPVAIELSLPHSAGDLS 460
Query: 242 PQWKQVFLPSWHSTECWLWKLAKAHVLAHDAGYHQLVSHWLRTHCCTEPYVIATNRQLSV 301
QV LP+ E +W LAKA+V+ +D+ YHQL+SHWL TH EP+VIAT+R LSV
Sbjct: 461 AAVSQVVLPAKEGVESTIWLLAKAYVIVNDSCYHQLMSHWLNTHAAMEPFVIATHRHLSV 520
Query: 302 MHPIYRLLDPHFRYTMEINGLARQALVNADGIIESSFSPGKYSMEFSSVAYDKQWRFDHE 361
+HPIY+LL PH+R M IN LARQ+L+NA+GIIE++F P KYS+E SS Y K W F +
Sbjct: 521 LHPIYKLLTPHYRNNMNINALARQSLINANGIIETTFLPSKYSVEMSSAVY-KNWVFTDQ 579
Query: 362 ALPKDLISRGLAVEDPSAPHGLKLTIEDYPFANDGLDLWDAIKQWVTDYVNHYYPDKSLV 421
ALP DLI RG+A++DPS PHG++L IEDYP+A DGL++W AIK WV +YV YY V
Sbjct: 580 ALPADLIKRGVAIKDPSTPHGVRLLIEDYPYAADGLEIWAAIKTWVQEYVPLYYARDDDV 639
Query: 422 ESDEELQAWWTEIRTVGHGDKKHEPWWPVLKTPKDLIEIITTIVWVTSGHHAAVNFGQYT 481
++D ELQ WW E GHGD K +PWWP L+T +DL+E+ I+W+ S HAAVNFGQY
Sbjct: 640 KNDSELQHWWKEAVEKGHGDLKDKPWWPKLQTLEDLVEVCLIIIWIASALHAAVNFGQYP 699
Query: 482 YGGYFPNRPTTARCNIATEDPSDEQWKFFLEKPENALLNTFPSQIQATKVMAILDVLSTH 541
YGG NRPT +R + + +++ + E A L T S++ ++++++LSTH
Sbjct: 700 YGGLIMNRPTASRRLLP--EKGTPEYEEMINNHEKAYLRTITSKLPTLISLSVIEILSTH 757
Query: 542 SPDEEYLGKEIEPAWREDPVINAAFEKFRGKLMELEGIIDARNADPKLR-NRNGAGMVPY 600
+ DE YLG+ P W D AF+KF KL E+E + RN DP L+ NR G +PY
Sbjct: 758 ASDEVYLGQRDNPHWTSDSKALQAFQKFGNKLKEIEEKLVRRNNDPSLQGNRLGPVQLPY 817
Query: 601 ELLKPFSEPGVTGKGVPYSISI 622
LL P SE G+T +G+P SISI
Sbjct: 818 TLLYPSSEEGLTFRGIPNSISI 839
>pdb|2SBL|B Chain B, The Three-Dimensional Structure Of An Arachidonic Acid 15-
Lipoxygenase
pdb|1F8N|A Chain A, Lipoxygenase-1 (Soybean) At 100k, New Refinement
pdb|1YGE|A Chain A, Lipoxygenase-1 (Soybean) At 100k
pdb|2SBL|A Chain A, The Three-Dimensional Structure Of An Arachidonic Acid 15-
Lipoxygenase
Length = 839
Score = 527 bits (1358), Expect = e-150, Method: Compositional matrix adjust.
Identities = 280/622 (45%), Positives = 387/622 (62%), Gaps = 17/622 (2%)
Query: 8 DQFSEKREGNFYVPRDEAFSEVKQLTFSAKTVYSVLHALVPSLETAF--VDPDLGFPYFS 65
D +EK+ FYVPRDE +K S+ + P+ E+AF + F F
Sbjct: 228 DPNTEKQGEVFYVPRDENLGHLKSKDALEIGTKSLSQIVQPAFESAFDLKSTPIEFHSFQ 287
Query: 66 AIDALFNEGVNLPPLKQEGFWNTLLPR-LVKAIEDT-GDNILLFETPETMDRDKFFWFRD 123
+ L+ G+ LP +T++P ++K + T G +IL F P + + W D
Sbjct: 288 DVHDLYEGGIKLP----RDVISTIIPLPVIKELYRTDGQHILKFPQPHVVQVSQSAWMTD 343
Query: 124 EEFSRQTLAGLNPYSIRLITEWPLKSTLDPEIYGPPESAITTELIEKEIGGMISVEEAIK 183
EEF+R+ +AG+NP IR + E+P KS LDP IYG S IT + ++ + +++EA+
Sbjct: 344 EEFAREMIAGVNPCVIRGLEEFPPKSNLDPAIYGDQSSKITADSLDLD---GYTMDEALG 400
Query: 184 QKKLFILDYHDLFLPYVEKVRQLKSTTLYGSRTIFFLTPAGTLRPIAIELTRPPMNG--K 241
++LF+LDYHD+F+PYV ++ QL S Y +RTI FL GTL+P+AIEL+ P G
Sbjct: 401 SRRLFMLDYHDIFMPYVRQINQLNSAKTYATRTILFLREDGTLKPVAIELSLPHSAGDLS 460
Query: 242 PQWKQVFLPSWHSTECWLWKLAKAHVLAHDAGYHQLVSHWLRTHCCTEPYVIATNRQLSV 301
QV LP+ E +W LAKA+V+ +D+ YHQL+SHWL TH EP+VIAT+R LSV
Sbjct: 461 AAVSQVVLPAKEGVESTIWLLAKAYVIVNDSCYHQLMSHWLNTHAAMEPFVIATHRHLSV 520
Query: 302 MHPIYRLLDPHFRYTMEINGLARQALVNADGIIESSFSPGKYSMEFSSVAYDKQWRFDHE 361
+HPIY+LL PH+R M IN LARQ+L+NA+GIIE++F P KYS+E SS Y K W F +
Sbjct: 521 LHPIYKLLTPHYRNNMNINALARQSLINANGIIETTFLPSKYSVEMSSAVY-KNWVFTDQ 579
Query: 362 ALPKDLISRGLAVEDPSAPHGLKLTIEDYPFANDGLDLWDAIKQWVTDYVNHYYPDKSLV 421
ALP DLI RG+A++DPS PHG++L IEDYP+A DGL++W AIK WV +YV YY V
Sbjct: 580 ALPADLIKRGVAIKDPSTPHGVRLLIEDYPYAADGLEIWAAIKTWVQEYVPLYYARDDDV 639
Query: 422 ESDEELQAWWTEIRTVGHGDKKHEPWWPVLKTPKDLIEIITTIVWVTSGHHAAVNFGQYT 481
++D ELQ WW E GHGD K +PWWP L+T +DL+E+ I+W+ S HAAVNFGQY
Sbjct: 640 KNDSELQHWWKEAVEKGHGDLKDKPWWPKLQTLEDLVEVCLIIIWIASALHAAVNFGQYP 699
Query: 482 YGGYFPNRPTTARCNIATEDPSDEQWKFFLEKPENALLNTFPSQIQATKVMAILDVLSTH 541
YGG NRPT +R + + +++ + E A L T S++ ++++++LSTH
Sbjct: 700 YGGLIMNRPTASRRLLP--EKGTPEYEEMINNHEKAYLRTITSKLPTLISLSVIEILSTH 757
Query: 542 SPDEEYLGKEIEPAWREDPVINAAFEKFRGKLMELEGIIDARNADPKLR-NRNGAGMVPY 600
+ DE YLG+ P W D AF+KF KL E+E + RN DP L+ NR G +PY
Sbjct: 758 ASDEVYLGQRDNPHWTSDSKALQAFQKFGNKLKEIEEKLVRRNNDPSLQGNRLGPVQLPY 817
Query: 601 ELLKPFSEPGVTGKGVPYSISI 622
LL P SE G+T +G+P SISI
Sbjct: 818 TLLYPSSEEGLTFRGIPNSISI 839
>pdb|3BND|A Chain A, Lipoxygenase-1 (Soybean), I553v Mutant
Length = 839
Score = 527 bits (1357), Expect = e-150, Method: Compositional matrix adjust.
Identities = 279/622 (44%), Positives = 387/622 (62%), Gaps = 17/622 (2%)
Query: 8 DQFSEKREGNFYVPRDEAFSEVKQLTFSAKTVYSVLHALVPSLETAF--VDPDLGFPYFS 65
D +EK+ FYVPRDE +K S+ + P+ E+AF + F F
Sbjct: 228 DPNTEKQGEVFYVPRDENLGHLKSKDALEIGTKSLSQIVQPAFESAFDLKSTPIEFHSFQ 287
Query: 66 AIDALFNEGVNLPPLKQEGFWNTLLPR-LVKAIEDT-GDNILLFETPETMDRDKFFWFRD 123
+ L+ G+ LP +T++P ++K + T G +IL F P + + W D
Sbjct: 288 DVHDLYEGGIKLP----RDVISTIIPLPVIKELYRTDGQHILKFPQPHVVQVSQSAWMTD 343
Query: 124 EEFSRQTLAGLNPYSIRLITEWPLKSTLDPEIYGPPESAITTELIEKEIGGMISVEEAIK 183
EEF+R+ +AG+NP IR + E+P KS LDP IYG S IT + ++ + +++EA+
Sbjct: 344 EEFAREMIAGVNPCVIRGLEEFPPKSNLDPAIYGDQSSKITADSLDLD---GYTMDEALG 400
Query: 184 QKKLFILDYHDLFLPYVEKVRQLKSTTLYGSRTIFFLTPAGTLRPIAIELTRPPMNG--K 241
++LF+LDYHD+F+PYV ++ QL S Y +RTI FL GTL+P+AIEL+ P G
Sbjct: 401 SRRLFMLDYHDIFMPYVRQINQLNSAKTYATRTILFLREDGTLKPVAIELSLPHSAGDLS 460
Query: 242 PQWKQVFLPSWHSTECWLWKLAKAHVLAHDAGYHQLVSHWLRTHCCTEPYVIATNRQLSV 301
QV LP+ E +W LAKA+V+ +D+ YHQL+SHWL TH EP+VIAT+R LSV
Sbjct: 461 AAVSQVVLPAKEGVESTIWLLAKAYVIVNDSCYHQLMSHWLNTHAAMEPFVIATHRHLSV 520
Query: 302 MHPIYRLLDPHFRYTMEINGLARQALVNADGIIESSFSPGKYSMEFSSVAYDKQWRFDHE 361
+HPIY+LL PH+R M IN LARQ+L+NA+GI+E++F P KYS+E SS Y K W F +
Sbjct: 521 LHPIYKLLTPHYRNNMNINALARQSLINANGIVETTFLPSKYSVEMSSAVY-KNWVFTDQ 579
Query: 362 ALPKDLISRGLAVEDPSAPHGLKLTIEDYPFANDGLDLWDAIKQWVTDYVNHYYPDKSLV 421
ALP DLI RG+A++DPS PHG++L IEDYP+A DGL++W AIK WV +YV YY V
Sbjct: 580 ALPADLIKRGVAIKDPSTPHGVRLLIEDYPYAADGLEIWAAIKTWVQEYVPLYYARDDDV 639
Query: 422 ESDEELQAWWTEIRTVGHGDKKHEPWWPVLKTPKDLIEIITTIVWVTSGHHAAVNFGQYT 481
++D ELQ WW E GHGD K +PWWP L+T +DL+E+ I+W+ S HAAVNFGQY
Sbjct: 640 KNDSELQHWWKEAVEKGHGDLKDKPWWPKLQTLEDLVEVCLIIIWIASALHAAVNFGQYP 699
Query: 482 YGGYFPNRPTTARCNIATEDPSDEQWKFFLEKPENALLNTFPSQIQATKVMAILDVLSTH 541
YGG NRPT +R + + +++ + E A L T S++ ++++++LSTH
Sbjct: 700 YGGLIMNRPTASRRLLP--EKGTPEYEEMINNHEKAYLRTITSKLPTLISLSVIEILSTH 757
Query: 542 SPDEEYLGKEIEPAWREDPVINAAFEKFRGKLMELEGIIDARNADPKLR-NRNGAGMVPY 600
+ DE YLG+ P W D AF+KF KL E+E + RN DP L+ NR G +PY
Sbjct: 758 ASDEVYLGQRDNPHWTSDSKALQAFQKFGNKLKEIEEKLVRRNNDPSLQGNRLGPVQLPY 817
Query: 601 ELLKPFSEPGVTGKGVPYSISI 622
LL P SE G+T +G+P SISI
Sbjct: 818 TLLYPSSEEGLTFRGIPNSISI 839
>pdb|3BNB|A Chain A, Lipoxygenase-1 (Soybean) I553l Mutant
Length = 839
Score = 526 bits (1356), Expect = e-149, Method: Compositional matrix adjust.
Identities = 279/622 (44%), Positives = 387/622 (62%), Gaps = 17/622 (2%)
Query: 8 DQFSEKREGNFYVPRDEAFSEVKQLTFSAKTVYSVLHALVPSLETAF--VDPDLGFPYFS 65
D +EK+ FYVPRDE +K S+ + P+ E+AF + F F
Sbjct: 228 DPNTEKQGEVFYVPRDENLGHLKSKDALEIGTKSLSQIVQPAFESAFDLKSTPIEFHSFQ 287
Query: 66 AIDALFNEGVNLPPLKQEGFWNTLLPR-LVKAIEDT-GDNILLFETPETMDRDKFFWFRD 123
+ L+ G+ LP +T++P ++K + T G +IL F P + + W D
Sbjct: 288 DVHDLYEGGIKLP----RDVISTIIPLPVIKELYRTDGQHILKFPQPHVVQVSQSAWMTD 343
Query: 124 EEFSRQTLAGLNPYSIRLITEWPLKSTLDPEIYGPPESAITTELIEKEIGGMISVEEAIK 183
EEF+R+ +AG+NP IR + E+P KS LDP IYG S IT + ++ + +++EA+
Sbjct: 344 EEFAREMIAGVNPCVIRGLEEFPPKSNLDPAIYGDQSSKITADSLDLD---GYTMDEALG 400
Query: 184 QKKLFILDYHDLFLPYVEKVRQLKSTTLYGSRTIFFLTPAGTLRPIAIELTRPPMNG--K 241
++LF+LDYHD+F+PYV ++ QL S Y +RTI FL GTL+P+AIEL+ P G
Sbjct: 401 SRRLFMLDYHDIFMPYVRQINQLNSAKTYATRTILFLREDGTLKPVAIELSLPHSAGDLS 460
Query: 242 PQWKQVFLPSWHSTECWLWKLAKAHVLAHDAGYHQLVSHWLRTHCCTEPYVIATNRQLSV 301
QV LP+ E +W LAKA+V+ +D+ YHQL+SHWL TH EP+VIAT+R LSV
Sbjct: 461 AAVSQVVLPAKEGVESTIWLLAKAYVIVNDSCYHQLMSHWLNTHAAMEPFVIATHRHLSV 520
Query: 302 MHPIYRLLDPHFRYTMEINGLARQALVNADGIIESSFSPGKYSMEFSSVAYDKQWRFDHE 361
+HPIY+LL PH+R M IN LARQ+L+NA+GI+E++F P KYS+E SS Y K W F +
Sbjct: 521 LHPIYKLLTPHYRNNMNINALARQSLINANGILETTFLPSKYSVEMSSAVY-KNWVFTDQ 579
Query: 362 ALPKDLISRGLAVEDPSAPHGLKLTIEDYPFANDGLDLWDAIKQWVTDYVNHYYPDKSLV 421
ALP DLI RG+A++DPS PHG++L IEDYP+A DGL++W AIK WV +YV YY V
Sbjct: 580 ALPADLIKRGVAIKDPSTPHGVRLLIEDYPYAADGLEIWAAIKTWVQEYVPLYYARDDDV 639
Query: 422 ESDEELQAWWTEIRTVGHGDKKHEPWWPVLKTPKDLIEIITTIVWVTSGHHAAVNFGQYT 481
++D ELQ WW E GHGD K +PWWP L+T +DL+E+ I+W+ S HAAVNFGQY
Sbjct: 640 KNDSELQHWWKEAVEKGHGDLKDKPWWPKLQTLEDLVEVCLIIIWIASALHAAVNFGQYP 699
Query: 482 YGGYFPNRPTTARCNIATEDPSDEQWKFFLEKPENALLNTFPSQIQATKVMAILDVLSTH 541
YGG NRPT +R + + +++ + E A L T S++ ++++++LSTH
Sbjct: 700 YGGLIMNRPTASRRLLP--EKGTPEYEEMINNHEKAYLRTITSKLPTLISLSVIEILSTH 757
Query: 542 SPDEEYLGKEIEPAWREDPVINAAFEKFRGKLMELEGIIDARNADPKLR-NRNGAGMVPY 600
+ DE YLG+ P W D AF+KF KL E+E + RN DP L+ NR G +PY
Sbjct: 758 ASDEVYLGQRDNPHWTSDSKALQAFQKFGNKLKEIEEKLVRRNNDPSLQGNRLGPVQLPY 817
Query: 601 ELLKPFSEPGVTGKGVPYSISI 622
LL P SE G+T +G+P SISI
Sbjct: 818 TLLYPSSEEGLTFRGIPNSISI 839
>pdb|1FGR|A Chain A, Lipoxygenase-1 (Soybean) At 100k, Q697e Mutant
Length = 839
Score = 526 bits (1355), Expect = e-149, Method: Compositional matrix adjust.
Identities = 279/622 (44%), Positives = 387/622 (62%), Gaps = 17/622 (2%)
Query: 8 DQFSEKREGNFYVPRDEAFSEVKQLTFSAKTVYSVLHALVPSLETAF--VDPDLGFPYFS 65
D +EK+ FYVPRDE +K S+ + P+ E+AF + F F
Sbjct: 228 DPNTEKQGEVFYVPRDENLGHLKSKDALEIGTKSLSQIVQPAFESAFDLKSTPIEFHSFQ 287
Query: 66 AIDALFNEGVNLPPLKQEGFWNTLLPR-LVKAIEDT-GDNILLFETPETMDRDKFFWFRD 123
+ L+ G+ LP +T++P ++K + T G +IL F P + + W D
Sbjct: 288 DVHDLYEGGIKLP----RDVISTIIPLPVIKELYRTDGQHILKFPQPHVVQVSQSAWMTD 343
Query: 124 EEFSRQTLAGLNPYSIRLITEWPLKSTLDPEIYGPPESAITTELIEKEIGGMISVEEAIK 183
EEF+R+ +AG+NP IR + E+P KS LDP IYG S IT + ++ + +++EA+
Sbjct: 344 EEFAREMIAGVNPCVIRGLEEFPPKSNLDPAIYGDQSSKITADSLDLD---GYTMDEALG 400
Query: 184 QKKLFILDYHDLFLPYVEKVRQLKSTTLYGSRTIFFLTPAGTLRPIAIELTRPPMNG--K 241
++LF+LDYHD+F+PYV ++ QL S Y +RTI FL GTL+P+AIEL+ P G
Sbjct: 401 SRRLFMLDYHDIFMPYVRQINQLNSAKTYATRTILFLREDGTLKPVAIELSLPHSAGDLS 460
Query: 242 PQWKQVFLPSWHSTECWLWKLAKAHVLAHDAGYHQLVSHWLRTHCCTEPYVIATNRQLSV 301
QV LP+ E +W LAKA+V+ +D+ YHQL+SHWL TH EP+VIAT+R LSV
Sbjct: 461 AAVSQVVLPAKEGVESTIWLLAKAYVIVNDSCYHQLMSHWLNTHAAMEPFVIATHRHLSV 520
Query: 302 MHPIYRLLDPHFRYTMEINGLARQALVNADGIIESSFSPGKYSMEFSSVAYDKQWRFDHE 361
+HPIY+LL PH+R M IN LARQ+L+NA+GIIE++F P KYS+E SS Y K W F +
Sbjct: 521 LHPIYKLLTPHYRNNMNINALARQSLINANGIIETTFLPSKYSVEMSSAVY-KNWVFTDQ 579
Query: 362 ALPKDLISRGLAVEDPSAPHGLKLTIEDYPFANDGLDLWDAIKQWVTDYVNHYYPDKSLV 421
ALP DLI RG+A++DPS PHG++L IEDYP+A DGL++W AIK WV +YV YY V
Sbjct: 580 ALPADLIKRGVAIKDPSTPHGVRLLIEDYPYAADGLEIWAAIKTWVQEYVPLYYARDDDV 639
Query: 422 ESDEELQAWWTEIRTVGHGDKKHEPWWPVLKTPKDLIEIITTIVWVTSGHHAAVNFGQYT 481
++D ELQ WW E GHGD K +PWWP L+T +DL+E+ I+W+ S HAAVNFG+Y
Sbjct: 640 KNDSELQHWWKEAVEKGHGDLKDKPWWPKLQTLEDLVEVCLIIIWIASALHAAVNFGEYP 699
Query: 482 YGGYFPNRPTTARCNIATEDPSDEQWKFFLEKPENALLNTFPSQIQATKVMAILDVLSTH 541
YGG NRPT +R + + +++ + E A L T S++ ++++++LSTH
Sbjct: 700 YGGLIMNRPTASRRLLP--EKGTPEYEEMINNHEKAYLRTITSKLPTLISLSVIEILSTH 757
Query: 542 SPDEEYLGKEIEPAWREDPVINAAFEKFRGKLMELEGIIDARNADPKLR-NRNGAGMVPY 600
+ DE YLG+ P W D AF+KF KL E+E + RN DP L+ NR G +PY
Sbjct: 758 ASDEVYLGQRDNPHWTSDSKALQAFQKFGNKLKEIEEKLVRRNNDPSLQGNRLGPVQLPY 817
Query: 601 ELLKPFSEPGVTGKGVPYSISI 622
LL P SE G+T +G+P SISI
Sbjct: 818 TLLYPSSEEGLTFRGIPNSISI 839
>pdb|1FGQ|A Chain A, Lipoxygenase-1 (Soybean) At 100k, Q495e Mutant
Length = 839
Score = 526 bits (1355), Expect = e-149, Method: Compositional matrix adjust.
Identities = 279/622 (44%), Positives = 387/622 (62%), Gaps = 17/622 (2%)
Query: 8 DQFSEKREGNFYVPRDEAFSEVKQLTFSAKTVYSVLHALVPSLETAF--VDPDLGFPYFS 65
D +EK+ FYVPRDE +K S+ + P+ E+AF + F F
Sbjct: 228 DPNTEKQGEVFYVPRDENLGHLKSKDALEIGTKSLSQIVQPAFESAFDLKSTPIEFHSFQ 287
Query: 66 AIDALFNEGVNLPPLKQEGFWNTLLPR-LVKAIEDT-GDNILLFETPETMDRDKFFWFRD 123
+ L+ G+ LP +T++P ++K + T G +IL F P + + W D
Sbjct: 288 DVHDLYEGGIKLP----RDVISTIIPLPVIKELYRTDGQHILKFPQPHVVQVSQSAWMTD 343
Query: 124 EEFSRQTLAGLNPYSIRLITEWPLKSTLDPEIYGPPESAITTELIEKEIGGMISVEEAIK 183
EEF+R+ +AG+NP IR + E+P KS LDP IYG S IT + ++ + +++EA+
Sbjct: 344 EEFAREMIAGVNPCVIRGLEEFPPKSNLDPAIYGDQSSKITADSLDLD---GYTMDEALG 400
Query: 184 QKKLFILDYHDLFLPYVEKVRQLKSTTLYGSRTIFFLTPAGTLRPIAIELTRPPMNG--K 241
++LF+LDYHD+F+PYV ++ QL S Y +RTI FL GTL+P+AIEL+ P G
Sbjct: 401 SRRLFMLDYHDIFMPYVRQINQLNSAKTYATRTILFLREDGTLKPVAIELSLPHSAGDLS 460
Query: 242 PQWKQVFLPSWHSTECWLWKLAKAHVLAHDAGYHQLVSHWLRTHCCTEPYVIATNRQLSV 301
QV LP+ E +W LAKA+V+ +D+ YH+L+SHWL TH EP+VIAT+R LSV
Sbjct: 461 AAVSQVVLPAKEGVESTIWLLAKAYVIVNDSCYHELMSHWLNTHAAMEPFVIATHRHLSV 520
Query: 302 MHPIYRLLDPHFRYTMEINGLARQALVNADGIIESSFSPGKYSMEFSSVAYDKQWRFDHE 361
+HPIY+LL PH+R M IN LARQ+L+NA+GIIE++F P KYS+E SS Y K W F +
Sbjct: 521 LHPIYKLLTPHYRNNMNINALARQSLINANGIIETTFLPSKYSVEMSSAVY-KNWVFTDQ 579
Query: 362 ALPKDLISRGLAVEDPSAPHGLKLTIEDYPFANDGLDLWDAIKQWVTDYVNHYYPDKSLV 421
ALP DLI RG+A++DPS PHG++L IEDYP+A DGL++W AIK WV +YV YY V
Sbjct: 580 ALPADLIKRGVAIKDPSTPHGVRLLIEDYPYAADGLEIWAAIKTWVQEYVPLYYARDDDV 639
Query: 422 ESDEELQAWWTEIRTVGHGDKKHEPWWPVLKTPKDLIEIITTIVWVTSGHHAAVNFGQYT 481
++D ELQ WW E GHGD K +PWWP L+T +DL+E+ I+W+ S HAAVNFGQY
Sbjct: 640 KNDSELQHWWKEAVEKGHGDLKDKPWWPKLQTLEDLVEVCLIIIWIASALHAAVNFGQYP 699
Query: 482 YGGYFPNRPTTARCNIATEDPSDEQWKFFLEKPENALLNTFPSQIQATKVMAILDVLSTH 541
YGG NRPT +R + + +++ + E A L T S++ ++++++LSTH
Sbjct: 700 YGGLIMNRPTASRRLLP--EKGTPEYEEMINNHEKAYLRTITSKLPTLISLSVIEILSTH 757
Query: 542 SPDEEYLGKEIEPAWREDPVINAAFEKFRGKLMELEGIIDARNADPKLR-NRNGAGMVPY 600
+ DE YLG+ P W D AF+KF KL E+E + RN DP L+ NR G +PY
Sbjct: 758 ASDEVYLGQRDNPHWTSDSKALQAFQKFGNKLKEIEEKLVRRNNDPSLQGNRLGPVQLPY 817
Query: 601 ELLKPFSEPGVTGKGVPYSISI 622
LL P SE G+T +G+P SISI
Sbjct: 818 TLLYPSSEEGLTFRGIPNSISI 839
>pdb|1FGT|A Chain A, Lipoxygenase-1 (Soybean) At 100k, Q697n Mutant
Length = 839
Score = 525 bits (1353), Expect = e-149, Method: Compositional matrix adjust.
Identities = 279/622 (44%), Positives = 386/622 (62%), Gaps = 17/622 (2%)
Query: 8 DQFSEKREGNFYVPRDEAFSEVKQLTFSAKTVYSVLHALVPSLETAF--VDPDLGFPYFS 65
D +EK+ FYVPRDE +K S+ + P+ E+AF + F F
Sbjct: 228 DPNTEKQGEVFYVPRDENLGHLKSKDALEIGTKSLSQIVQPAFESAFDLKSTPIEFHSFQ 287
Query: 66 AIDALFNEGVNLPPLKQEGFWNTLLPR-LVKAIEDT-GDNILLFETPETMDRDKFFWFRD 123
+ L+ G+ LP +T++P ++K + T G +IL F P + + W D
Sbjct: 288 DVHDLYEGGIKLP----RDVISTIIPLPVIKELYRTDGQHILKFPQPHVVQVSQSAWMTD 343
Query: 124 EEFSRQTLAGLNPYSIRLITEWPLKSTLDPEIYGPPESAITTELIEKEIGGMISVEEAIK 183
EEF+R+ +AG+NP IR + E+P KS LDP IYG S IT + ++ + +++EA+
Sbjct: 344 EEFAREMIAGVNPCVIRGLEEFPPKSNLDPAIYGDQSSKITADSLDLD---GYTMDEALG 400
Query: 184 QKKLFILDYHDLFLPYVEKVRQLKSTTLYGSRTIFFLTPAGTLRPIAIELTRPPMNG--K 241
++LF+LDYHD+F+PYV ++ QL S Y +RTI FL GTL+P+AIEL+ P G
Sbjct: 401 SRRLFMLDYHDIFMPYVRQINQLNSAKTYATRTILFLREDGTLKPVAIELSLPHSAGDLS 460
Query: 242 PQWKQVFLPSWHSTECWLWKLAKAHVLAHDAGYHQLVSHWLRTHCCTEPYVIATNRQLSV 301
QV LP+ E +W LAKA+V+ +D+ YHQL+SHWL TH EP+VIAT+R LSV
Sbjct: 461 AAVSQVVLPAKEGVESTIWLLAKAYVIVNDSCYHQLMSHWLNTHAAMEPFVIATHRHLSV 520
Query: 302 MHPIYRLLDPHFRYTMEINGLARQALVNADGIIESSFSPGKYSMEFSSVAYDKQWRFDHE 361
+HPIY+LL PH+R M IN LARQ+L+NA+GIIE++F P KYS+E SS Y K W F +
Sbjct: 521 LHPIYKLLTPHYRNNMNINALARQSLINANGIIETTFLPSKYSVEMSSAVY-KNWVFTDQ 579
Query: 362 ALPKDLISRGLAVEDPSAPHGLKLTIEDYPFANDGLDLWDAIKQWVTDYVNHYYPDKSLV 421
ALP DLI RG+A++DPS PHG++L IEDYP+A DGL++W AIK WV +YV YY V
Sbjct: 580 ALPADLIKRGVAIKDPSTPHGVRLLIEDYPYAADGLEIWAAIKTWVQEYVPLYYARDDDV 639
Query: 422 ESDEELQAWWTEIRTVGHGDKKHEPWWPVLKTPKDLIEIITTIVWVTSGHHAAVNFGQYT 481
++D ELQ WW E GHGD K +PWWP L+T +DL+E+ I+W+ S HAAVNFG Y
Sbjct: 640 KNDSELQHWWKEAVEKGHGDLKDKPWWPKLQTLEDLVEVCLIIIWIASALHAAVNFGNYP 699
Query: 482 YGGYFPNRPTTARCNIATEDPSDEQWKFFLEKPENALLNTFPSQIQATKVMAILDVLSTH 541
YGG NRPT +R + + +++ + E A L T S++ ++++++LSTH
Sbjct: 700 YGGLIMNRPTASRRLLP--EKGTPEYEEMINNHEKAYLRTITSKLPTLISLSVIEILSTH 757
Query: 542 SPDEEYLGKEIEPAWREDPVINAAFEKFRGKLMELEGIIDARNADPKLR-NRNGAGMVPY 600
+ DE YLG+ P W D AF+KF KL E+E + RN DP L+ NR G +PY
Sbjct: 758 ASDEVYLGQRDNPHWTSDSKALQAFQKFGNKLKEIEEKLVRRNNDPSLQGNRLGPVQLPY 817
Query: 601 ELLKPFSEPGVTGKGVPYSISI 622
LL P SE G+T +G+P SISI
Sbjct: 818 TLLYPSSEEGLTFRGIPNSISI 839
>pdb|1FGM|A Chain A, Lipoxygenase-1 (Soybean) At 100k, N694h Mutant
Length = 839
Score = 525 bits (1352), Expect = e-149, Method: Compositional matrix adjust.
Identities = 279/622 (44%), Positives = 387/622 (62%), Gaps = 17/622 (2%)
Query: 8 DQFSEKREGNFYVPRDEAFSEVKQLTFSAKTVYSVLHALVPSLETAF--VDPDLGFPYFS 65
D +EK+ FYVPRDE +K S+ + P+ E+AF + F F
Sbjct: 228 DPNTEKQGEVFYVPRDENLGHLKSKDALEIGTKSLSQIVQPAFESAFDLKSTPIEFHSFQ 287
Query: 66 AIDALFNEGVNLPPLKQEGFWNTLLPR-LVKAIEDT-GDNILLFETPETMDRDKFFWFRD 123
+ L+ G+ LP +T++P ++K + T G +IL F P + + W D
Sbjct: 288 DVHDLYEGGIKLP----RDVISTIIPLPVIKELYRTDGQHILKFPQPHVVQVSQSAWMTD 343
Query: 124 EEFSRQTLAGLNPYSIRLITEWPLKSTLDPEIYGPPESAITTELIEKEIGGMISVEEAIK 183
EEF+R+ +AG+NP IR + E+P KS LDP IYG S IT + ++ + +++EA+
Sbjct: 344 EEFAREMIAGVNPCVIRGLEEFPPKSNLDPAIYGDQSSKITADSLDLD---GYTMDEALG 400
Query: 184 QKKLFILDYHDLFLPYVEKVRQLKSTTLYGSRTIFFLTPAGTLRPIAIELTRPPMNG--K 241
++LF+LDYHD+F+PYV ++ QL S Y +RTI FL GTL+P+AIEL+ P G
Sbjct: 401 SRRLFMLDYHDIFMPYVRQINQLNSAKTYATRTILFLREDGTLKPVAIELSLPHSAGDLS 460
Query: 242 PQWKQVFLPSWHSTECWLWKLAKAHVLAHDAGYHQLVSHWLRTHCCTEPYVIATNRQLSV 301
QV LP+ E +W LAKA+V+ +D+ YHQL+SHWL TH EP+VIAT+R LSV
Sbjct: 461 AAVSQVVLPAKEGVESTIWLLAKAYVIVNDSCYHQLMSHWLNTHAAMEPFVIATHRHLSV 520
Query: 302 MHPIYRLLDPHFRYTMEINGLARQALVNADGIIESSFSPGKYSMEFSSVAYDKQWRFDHE 361
+HPIY+LL PH+R M IN LARQ+L+NA+GIIE++F P KYS+E SS Y K W F +
Sbjct: 521 LHPIYKLLTPHYRNNMNINALARQSLINANGIIETTFLPSKYSVEMSSAVY-KNWVFTDQ 579
Query: 362 ALPKDLISRGLAVEDPSAPHGLKLTIEDYPFANDGLDLWDAIKQWVTDYVNHYYPDKSLV 421
ALP DLI RG+A++DPS PHG++L IEDYP+A DGL++W AIK WV +YV YY V
Sbjct: 580 ALPADLIKRGVAIKDPSTPHGVRLLIEDYPYAADGLEIWAAIKTWVQEYVPLYYARDDDV 639
Query: 422 ESDEELQAWWTEIRTVGHGDKKHEPWWPVLKTPKDLIEIITTIVWVTSGHHAAVNFGQYT 481
++D ELQ WW E GHGD K +PWWP L+T +DL+E+ I+W+ S HAAV+FGQY
Sbjct: 640 KNDSELQHWWKEAVEKGHGDLKDKPWWPKLQTLEDLVEVCLIIIWIASALHAAVHFGQYP 699
Query: 482 YGGYFPNRPTTARCNIATEDPSDEQWKFFLEKPENALLNTFPSQIQATKVMAILDVLSTH 541
YGG NRPT +R + + +++ + E A L T S++ ++++++LSTH
Sbjct: 700 YGGLIMNRPTASRRLLP--EKGTPEYEEMINNHEKAYLRTITSKLPTLISLSVIEILSTH 757
Query: 542 SPDEEYLGKEIEPAWREDPVINAAFEKFRGKLMELEGIIDARNADPKLR-NRNGAGMVPY 600
+ DE YLG+ P W D AF+KF KL E+E + RN DP L+ NR G +PY
Sbjct: 758 ASDEVYLGQRDNPHWTSDSKALQAFQKFGNKLKEIEEKLVRRNNDPSLQGNRLGPVQLPY 817
Query: 601 ELLKPFSEPGVTGKGVPYSISI 622
LL P SE G+T +G+P SISI
Sbjct: 818 TLLYPSSEEGLTFRGIPNSISI 839
>pdb|3BNE|A Chain A, Lipoxygenase-1 (Soybean) I553a Mutant
Length = 839
Score = 525 bits (1352), Expect = e-149, Method: Compositional matrix adjust.
Identities = 279/622 (44%), Positives = 386/622 (62%), Gaps = 17/622 (2%)
Query: 8 DQFSEKREGNFYVPRDEAFSEVKQLTFSAKTVYSVLHALVPSLETAF--VDPDLGFPYFS 65
D +EK+ FYVPRDE +K S+ + P+ E+AF + F F
Sbjct: 228 DPNTEKQGEVFYVPRDENLGHLKSKDALEIGTKSLSQIVQPAFESAFDLKSTPIEFHSFQ 287
Query: 66 AIDALFNEGVNLPPLKQEGFWNTLLPR-LVKAIEDT-GDNILLFETPETMDRDKFFWFRD 123
+ L+ G+ LP +T++P ++K + T G +IL F P + + W D
Sbjct: 288 DVHDLYEGGIKLP----RDVISTIIPLPVIKELYRTDGQHILKFPQPHVVQVSQSAWMTD 343
Query: 124 EEFSRQTLAGLNPYSIRLITEWPLKSTLDPEIYGPPESAITTELIEKEIGGMISVEEAIK 183
EEF+R+ +AG+NP IR + E+P KS LDP IYG S IT + ++ + +++EA+
Sbjct: 344 EEFAREMIAGVNPCVIRGLEEFPPKSNLDPAIYGDQSSKITADSLDLD---GYTMDEALG 400
Query: 184 QKKLFILDYHDLFLPYVEKVRQLKSTTLYGSRTIFFLTPAGTLRPIAIELTRPPMNG--K 241
++LF+LDYHD+F+PYV ++ QL S Y +RTI FL GTL+P+AIEL+ P G
Sbjct: 401 SRRLFMLDYHDIFMPYVRQINQLNSAKTYATRTILFLREDGTLKPVAIELSLPHSAGDLS 460
Query: 242 PQWKQVFLPSWHSTECWLWKLAKAHVLAHDAGYHQLVSHWLRTHCCTEPYVIATNRQLSV 301
QV LP+ E +W LAKA+V+ +D+ YHQL+SHWL TH EP+VIAT+R LSV
Sbjct: 461 AAVSQVVLPAKEGVESTIWLLAKAYVIVNDSCYHQLMSHWLNTHAAMEPFVIATHRHLSV 520
Query: 302 MHPIYRLLDPHFRYTMEINGLARQALVNADGIIESSFSPGKYSMEFSSVAYDKQWRFDHE 361
+HPIY+LL PH+R M IN LARQ+L+NA+GI E++F P KYS+E SS Y K W F +
Sbjct: 521 LHPIYKLLTPHYRNNMNINALARQSLINANGIAETTFLPSKYSVEMSSAVY-KNWVFTDQ 579
Query: 362 ALPKDLISRGLAVEDPSAPHGLKLTIEDYPFANDGLDLWDAIKQWVTDYVNHYYPDKSLV 421
ALP DLI RG+A++DPS PHG++L IEDYP+A DGL++W AIK WV +YV YY V
Sbjct: 580 ALPADLIKRGVAIKDPSTPHGVRLLIEDYPYAADGLEIWAAIKTWVQEYVPLYYARDDDV 639
Query: 422 ESDEELQAWWTEIRTVGHGDKKHEPWWPVLKTPKDLIEIITTIVWVTSGHHAAVNFGQYT 481
++D ELQ WW E GHGD K +PWWP L+T +DL+E+ I+W+ S HAAVNFGQY
Sbjct: 640 KNDSELQHWWKEAVEKGHGDLKDKPWWPKLQTLEDLVEVCLIIIWIASALHAAVNFGQYP 699
Query: 482 YGGYFPNRPTTARCNIATEDPSDEQWKFFLEKPENALLNTFPSQIQATKVMAILDVLSTH 541
YGG NRPT +R + + +++ + E A L T S++ ++++++LSTH
Sbjct: 700 YGGLIMNRPTASRRLLP--EKGTPEYEEMINNHEKAYLRTITSKLPTLISLSVIEILSTH 757
Query: 542 SPDEEYLGKEIEPAWREDPVINAAFEKFRGKLMELEGIIDARNADPKLR-NRNGAGMVPY 600
+ DE YLG+ P W D AF+KF KL E+E + RN DP L+ NR G +PY
Sbjct: 758 ASDEVYLGQRDNPHWTSDSKALQAFQKFGNKLKEIEEKLVRRNNDPSLQGNRLGPVQLPY 817
Query: 601 ELLKPFSEPGVTGKGVPYSISI 622
LL P SE G+T +G+P SISI
Sbjct: 818 TLLYPSSEEGLTFRGIPNSISI 839
>pdb|1FGO|A Chain A, Lipoxygenase-1 (Soybean) At 100k, Q495a Mutant
Length = 839
Score = 525 bits (1352), Expect = e-149, Method: Compositional matrix adjust.
Identities = 279/622 (44%), Positives = 386/622 (62%), Gaps = 17/622 (2%)
Query: 8 DQFSEKREGNFYVPRDEAFSEVKQLTFSAKTVYSVLHALVPSLETAF--VDPDLGFPYFS 65
D +EK+ FYVPRDE +K S+ + P+ E+AF + F F
Sbjct: 228 DPNTEKQGEVFYVPRDENLGHLKSKDALEIGTKSLSQIVQPAFESAFDLKSTPIEFHSFQ 287
Query: 66 AIDALFNEGVNLPPLKQEGFWNTLLPR-LVKAIEDT-GDNILLFETPETMDRDKFFWFRD 123
+ L+ G+ LP +T++P ++K + T G +IL F P + + W D
Sbjct: 288 DVHDLYEGGIKLP----RDVISTIIPLPVIKELYRTDGQHILKFPQPHVVQVSQSAWMTD 343
Query: 124 EEFSRQTLAGLNPYSIRLITEWPLKSTLDPEIYGPPESAITTELIEKEIGGMISVEEAIK 183
EEF+R+ +AG+NP IR + E+P KS LDP IYG S IT + ++ + +++EA+
Sbjct: 344 EEFAREMIAGVNPCVIRGLEEFPPKSNLDPAIYGDQSSKITADSLDLD---GYTMDEALG 400
Query: 184 QKKLFILDYHDLFLPYVEKVRQLKSTTLYGSRTIFFLTPAGTLRPIAIELTRPPMNG--K 241
++LF+LDYHD+F+PYV ++ QL S Y +RTI FL GTL+P+AIEL+ P G
Sbjct: 401 SRRLFMLDYHDIFMPYVRQINQLNSAKTYATRTILFLREDGTLKPVAIELSLPHSAGDLS 460
Query: 242 PQWKQVFLPSWHSTECWLWKLAKAHVLAHDAGYHQLVSHWLRTHCCTEPYVIATNRQLSV 301
QV LP+ E +W LAKA+V+ +D+ YH L+SHWL TH EP+VIAT+R LSV
Sbjct: 461 AAVSQVVLPAKEGVESTIWLLAKAYVIVNDSCYHALMSHWLNTHAAMEPFVIATHRHLSV 520
Query: 302 MHPIYRLLDPHFRYTMEINGLARQALVNADGIIESSFSPGKYSMEFSSVAYDKQWRFDHE 361
+HPIY+LL PH+R M IN LARQ+L+NA+GIIE++F P KYS+E SS Y K W F +
Sbjct: 521 LHPIYKLLTPHYRNNMNINALARQSLINANGIIETTFLPSKYSVEMSSAVY-KNWVFTDQ 579
Query: 362 ALPKDLISRGLAVEDPSAPHGLKLTIEDYPFANDGLDLWDAIKQWVTDYVNHYYPDKSLV 421
ALP DLI RG+A++DPS PHG++L IEDYP+A DGL++W AIK WV +YV YY V
Sbjct: 580 ALPADLIKRGVAIKDPSTPHGVRLLIEDYPYAADGLEIWAAIKTWVQEYVPLYYARDDDV 639
Query: 422 ESDEELQAWWTEIRTVGHGDKKHEPWWPVLKTPKDLIEIITTIVWVTSGHHAAVNFGQYT 481
++D ELQ WW E GHGD K +PWWP L+T +DL+E+ I+W+ S HAAVNFGQY
Sbjct: 640 KNDSELQHWWKEAVEKGHGDLKDKPWWPKLQTLEDLVEVCLIIIWIASALHAAVNFGQYP 699
Query: 482 YGGYFPNRPTTARCNIATEDPSDEQWKFFLEKPENALLNTFPSQIQATKVMAILDVLSTH 541
YGG NRPT +R + + +++ + E A L T S++ ++++++LSTH
Sbjct: 700 YGGLIMNRPTASRRLLP--EKGTPEYEEMINNHEKAYLRTITSKLPTLISLSVIEILSTH 757
Query: 542 SPDEEYLGKEIEPAWREDPVINAAFEKFRGKLMELEGIIDARNADPKLR-NRNGAGMVPY 600
+ DE YLG+ P W D AF+KF KL E+E + RN DP L+ NR G +PY
Sbjct: 758 ASDEVYLGQRDNPHWTSDSKALQAFQKFGNKLKEIEEKLVRRNNDPSLQGNRLGPVQLPY 817
Query: 601 ELLKPFSEPGVTGKGVPYSISI 622
LL P SE G+T +G+P SISI
Sbjct: 818 TLLYPSSEEGLTFRGIPNSISI 839
>pdb|1Y4K|A Chain A, Lipoxygenase-1 (Soybean) At 100k, N694g Mutant
Length = 839
Score = 525 bits (1351), Expect = e-149, Method: Compositional matrix adjust.
Identities = 279/622 (44%), Positives = 386/622 (62%), Gaps = 17/622 (2%)
Query: 8 DQFSEKREGNFYVPRDEAFSEVKQLTFSAKTVYSVLHALVPSLETAF--VDPDLGFPYFS 65
D +EK+ FYVPRDE +K S+ + P+ E+AF + F F
Sbjct: 228 DPNTEKQGEVFYVPRDENLGHLKSKDALEIGTKSLSQIVQPAFESAFDLKSTPIEFHSFQ 287
Query: 66 AIDALFNEGVNLPPLKQEGFWNTLLPR-LVKAIEDT-GDNILLFETPETMDRDKFFWFRD 123
+ L+ G+ LP +T++P ++K + T G +IL F P + + W D
Sbjct: 288 DVHDLYEGGIKLP----RDVISTIIPLPVIKELYRTDGQHILKFPQPHVVQVSQSAWMTD 343
Query: 124 EEFSRQTLAGLNPYSIRLITEWPLKSTLDPEIYGPPESAITTELIEKEIGGMISVEEAIK 183
EEF+R+ +AG+NP IR + E+P KS LDP IYG S IT + ++ + +++EA+
Sbjct: 344 EEFAREMIAGVNPCVIRGLEEFPPKSNLDPAIYGDQSSKITADSLDLD---GYTMDEALG 400
Query: 184 QKKLFILDYHDLFLPYVEKVRQLKSTTLYGSRTIFFLTPAGTLRPIAIELTRPPMNG--K 241
++LF+LDYHD+F+PYV ++ QL S Y +RTI FL GTL+P+AIEL+ P G
Sbjct: 401 SRRLFMLDYHDIFMPYVRQINQLNSAKTYATRTILFLREDGTLKPVAIELSLPHSAGDLS 460
Query: 242 PQWKQVFLPSWHSTECWLWKLAKAHVLAHDAGYHQLVSHWLRTHCCTEPYVIATNRQLSV 301
QV LP+ E +W LAKA+V+ +D+ YHQL+SHWL TH EP+VIAT+R LSV
Sbjct: 461 AAVSQVVLPAKEGVESTIWLLAKAYVIVNDSCYHQLMSHWLNTHAAMEPFVIATHRHLSV 520
Query: 302 MHPIYRLLDPHFRYTMEINGLARQALVNADGIIESSFSPGKYSMEFSSVAYDKQWRFDHE 361
+HPIY+LL PH+R M IN LARQ+L+NA+GIIE++F P KYS+E SS Y K W F +
Sbjct: 521 LHPIYKLLTPHYRNNMNINALARQSLINANGIIETTFLPSKYSVEMSSAVY-KNWVFTDQ 579
Query: 362 ALPKDLISRGLAVEDPSAPHGLKLTIEDYPFANDGLDLWDAIKQWVTDYVNHYYPDKSLV 421
ALP DLI RG+A++DPS PHG++L IEDYP+A DGL++W AIK WV +YV YY V
Sbjct: 580 ALPADLIKRGVAIKDPSTPHGVRLLIEDYPYAADGLEIWAAIKTWVQEYVPLYYARDDDV 639
Query: 422 ESDEELQAWWTEIRTVGHGDKKHEPWWPVLKTPKDLIEIITTIVWVTSGHHAAVNFGQYT 481
++D ELQ WW E GHGD K +PWWP L+T +DL+E+ I+W+ S HAAV FGQY
Sbjct: 640 KNDSELQHWWKEAVEKGHGDLKDKPWWPKLQTLEDLVEVCLIIIWIASALHAAVGFGQYP 699
Query: 482 YGGYFPNRPTTARCNIATEDPSDEQWKFFLEKPENALLNTFPSQIQATKVMAILDVLSTH 541
YGG NRPT +R + + +++ + E A L T S++ ++++++LSTH
Sbjct: 700 YGGLIMNRPTASRRLLP--EKGTPEYEEMINNHEKAYLRTITSKLPTLISLSVIEILSTH 757
Query: 542 SPDEEYLGKEIEPAWREDPVINAAFEKFRGKLMELEGIIDARNADPKLR-NRNGAGMVPY 600
+ DE YLG+ P W D AF+KF KL E+E + RN DP L+ NR G +PY
Sbjct: 758 ASDEVYLGQRDNPHWTSDSKALQAFQKFGNKLKEIEEKLVRRNNDPSLQGNRLGPVQLPY 817
Query: 601 ELLKPFSEPGVTGKGVPYSISI 622
LL P SE G+T +G+P SISI
Sbjct: 818 TLLYPSSEEGLTFRGIPNSISI 839
>pdb|3BNC|A Chain A, Lipoxygenase-1 (Soybean) I553g Mutant
Length = 839
Score = 524 bits (1350), Expect = e-149, Method: Compositional matrix adjust.
Identities = 279/622 (44%), Positives = 386/622 (62%), Gaps = 17/622 (2%)
Query: 8 DQFSEKREGNFYVPRDEAFSEVKQLTFSAKTVYSVLHALVPSLETAF--VDPDLGFPYFS 65
D +EK+ FYVPRDE +K S+ + P+ E+AF + F F
Sbjct: 228 DPNTEKQGEVFYVPRDENLGHLKSKDALEIGTKSLSQIVQPAFESAFDLKSTPIEFHSFQ 287
Query: 66 AIDALFNEGVNLPPLKQEGFWNTLLPR-LVKAIEDT-GDNILLFETPETMDRDKFFWFRD 123
+ L+ G+ LP +T++P ++K + T G +IL F P + + W D
Sbjct: 288 DVHDLYEGGIKLP----RDVISTIIPLPVIKELYRTDGQHILKFPQPHVVQVSQSAWMTD 343
Query: 124 EEFSRQTLAGLNPYSIRLITEWPLKSTLDPEIYGPPESAITTELIEKEIGGMISVEEAIK 183
EEF+R+ +AG+NP IR + E+P KS LDP IYG S IT + ++ + +++EA+
Sbjct: 344 EEFAREMIAGVNPCVIRGLEEFPPKSNLDPAIYGDQSSKITADSLDLD---GYTMDEALG 400
Query: 184 QKKLFILDYHDLFLPYVEKVRQLKSTTLYGSRTIFFLTPAGTLRPIAIELTRPPMNG--K 241
++LF+LDYHD+F+PYV ++ QL S Y +RTI FL GTL+P+AIEL+ P G
Sbjct: 401 SRRLFMLDYHDIFMPYVRQINQLNSAKTYATRTILFLREDGTLKPVAIELSLPHSAGDLS 460
Query: 242 PQWKQVFLPSWHSTECWLWKLAKAHVLAHDAGYHQLVSHWLRTHCCTEPYVIATNRQLSV 301
QV LP+ E +W LAKA+V+ +D+ YHQL+SHWL TH EP+VIAT+R LSV
Sbjct: 461 AAVSQVVLPAKEGVESTIWLLAKAYVIVNDSCYHQLMSHWLNTHAAMEPFVIATHRHLSV 520
Query: 302 MHPIYRLLDPHFRYTMEINGLARQALVNADGIIESSFSPGKYSMEFSSVAYDKQWRFDHE 361
+HPIY+LL PH+R M IN LARQ+L+NA+GI E++F P KYS+E SS Y K W F +
Sbjct: 521 LHPIYKLLTPHYRNNMNINALARQSLINANGIGETTFLPSKYSVEMSSAVY-KNWVFTDQ 579
Query: 362 ALPKDLISRGLAVEDPSAPHGLKLTIEDYPFANDGLDLWDAIKQWVTDYVNHYYPDKSLV 421
ALP DLI RG+A++DPS PHG++L IEDYP+A DGL++W AIK WV +YV YY V
Sbjct: 580 ALPADLIKRGVAIKDPSTPHGVRLLIEDYPYAADGLEIWAAIKTWVQEYVPLYYARDDDV 639
Query: 422 ESDEELQAWWTEIRTVGHGDKKHEPWWPVLKTPKDLIEIITTIVWVTSGHHAAVNFGQYT 481
++D ELQ WW E GHGD K +PWWP L+T +DL+E+ I+W+ S HAAVNFGQY
Sbjct: 640 KNDSELQHWWKEAVEKGHGDLKDKPWWPKLQTLEDLVEVCLIIIWIASALHAAVNFGQYP 699
Query: 482 YGGYFPNRPTTARCNIATEDPSDEQWKFFLEKPENALLNTFPSQIQATKVMAILDVLSTH 541
YGG NRPT +R + + +++ + E A L T S++ ++++++LSTH
Sbjct: 700 YGGLIMNRPTASRRLLP--EKGTPEYEEMINNHEKAYLRTITSKLPTLISLSVIEILSTH 757
Query: 542 SPDEEYLGKEIEPAWREDPVINAAFEKFRGKLMELEGIIDARNADPKLR-NRNGAGMVPY 600
+ DE YLG+ P W D AF+KF KL E+E + RN DP L+ NR G +PY
Sbjct: 758 ASDEVYLGQRDNPHWTSDSKALQAFQKFGNKLKEIEEKLVRRNNDPSLQGNRLGPVQLPY 817
Query: 601 ELLKPFSEPGVTGKGVPYSISI 622
LL P SE G+T +G+P SISI
Sbjct: 818 TLLYPSSEEGLTFRGIPNSISI 839
>pdb|3O8Y|A Chain A, Stable-5-Lipoxygenase
pdb|3O8Y|B Chain B, Stable-5-Lipoxygenase
Length = 691
Score = 185 bits (470), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 140/486 (28%), Positives = 225/486 (46%), Gaps = 47/486 (9%)
Query: 120 WFRDEEFSRQTLAGLNPYSIRLITEWPLKSTLDPEIYGPPESAITTELIEKEIGGMISVE 179
W D F Q L G NP IR TE P K +TTE++E + +S+E
Sbjct: 244 WQEDLMFGYQFLNGANPVLIRRCTELPEKL------------PVTTEMVECSLERQLSLE 291
Query: 180 EAIKQKKLFILDYHDLFLPYVEKVRQLKSTTLYGSRTIFFLTPAGTLRPIAIELTRPPMN 239
+ ++Q +FI+D+ L K L + + A + PIAI+L + P +
Sbjct: 292 QEVQQGNIFIVDFELLDGIDANKTDPCTLQFLAAPICLLYKNLANKIVPIAIQLNQIPGD 351
Query: 240 GKPQWKQVFLPSWHSTECWLWKLAKAHVLAHDAGYHQLVSHWLRTHCCTEPYVIATNRQL 299
P +FLPS + W LAK V + D HQ ++H LRTH +E + IA RQL
Sbjct: 352 ENP----IFLPSDAKYD---WLLAKIWVRSSDFHVHQTITHLLRTHLVSEVFGIAMYRQL 404
Query: 300 SVMHPIYRLLDPHFRYTMEINGLARQALVNADGIIESSFSPGKYSMEFSSVAYDKQWRFD 359
+HPI++LL H R+T+ IN AR+ L+ G+ + + + G K +
Sbjct: 405 PAVHPIFKLLVAHVRFTIAINTKAREQLICECGLFDKANATGGGGHVQMVQRAMKDLTYA 464
Query: 360 HEALPKDLISRGLAVEDPSAPHGLKLTIEDYPFANDGLDLWDAIKQWVTDYVNHYYPDKS 419
P+ + +RG+ ++ I Y + +DGL +W+AI+ + + V+ YY
Sbjct: 465 SLCFPEAIKARGMESKE---------DIPYYFYRDDGLLVWEAIRTFTAEVVDIYYEGDQ 515
Query: 420 LVESDEELQAWWTEIRTVGHGDKKHEPWWPVLKTPKDLIEIITTIVWVTSGHHAAVNFGQ 479
+VE D ELQ + ++ G +K + +K+ + L E +T +++ S HAAVNFGQ
Sbjct: 516 VVEEDPELQDFVNDVYVYGMRGRKSSGFPKSVKSREQLSEYLTVVIFTASAQHAAVNFGQ 575
Query: 480 YTYGGYFPNRPTTARCNIATEDPSDEQWKFFLEKPENALLNTFPSQIQATKVMAILDVLS 539
Y + + PN P T R P + +E+ +++T P + ++ + + LS
Sbjct: 576 YDWASWIPNAPPTMRA-----PPPTAKGVVTIEQ----IVDTLPDRGRSCWHLGAVWALS 626
Query: 540 THSPDEEYLGKEIEPAWREDPVINAAFEKFRGKLMELEGIIDARNADPKLRNRNGAGMVP 599
+E +LG E + E PV A +FR L + +I RN + +L P
Sbjct: 627 QFQENELFLGMYPEEHFIEKPV-KEAMARFRKNLEAIVSVIAERNENLQL---------P 676
Query: 600 YELLKP 605
Y L P
Sbjct: 677 YYYLSP 682
>pdb|3V92|B Chain B, S663a Stable-5-Lox
pdb|3V92|A Chain A, S663a Stable-5-Lox
Length = 691
Score = 185 bits (469), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 140/486 (28%), Positives = 225/486 (46%), Gaps = 47/486 (9%)
Query: 120 WFRDEEFSRQTLAGLNPYSIRLITEWPLKSTLDPEIYGPPESAITTELIEKEIGGMISVE 179
W D F Q L G NP IR TE P K +TTE++E + +S+E
Sbjct: 244 WQEDLMFGYQFLNGANPVLIRRCTELPEKL------------PVTTEMVECSLERQLSLE 291
Query: 180 EAIKQKKLFILDYHDLFLPYVEKVRQLKSTTLYGSRTIFFLTPAGTLRPIAIELTRPPMN 239
+ ++Q +FI+D+ L K L + + A + PIAI+L + P +
Sbjct: 292 QEVQQGNIFIVDFELLDGIDANKTDPCTLQFLAAPICLLYKNLANKIVPIAIQLNQIPGD 351
Query: 240 GKPQWKQVFLPSWHSTECWLWKLAKAHVLAHDAGYHQLVSHWLRTHCCTEPYVIATNRQL 299
P +FLPS + W LAK V + D HQ ++H LRTH +E + IA RQL
Sbjct: 352 ENP----IFLPSDAKYD---WLLAKIWVRSSDFHVHQTITHLLRTHLVSEVFGIAMYRQL 404
Query: 300 SVMHPIYRLLDPHFRYTMEINGLARQALVNADGIIESSFSPGKYSMEFSSVAYDKQWRFD 359
+HPI++LL H R+T+ IN AR+ L+ G+ + + + G K +
Sbjct: 405 PAVHPIFKLLVAHVRFTIAINTKAREQLICECGLFDKANATGGGGHVQMVQRAMKDLTYA 464
Query: 360 HEALPKDLISRGLAVEDPSAPHGLKLTIEDYPFANDGLDLWDAIKQWVTDYVNHYYPDKS 419
P+ + +RG+ ++ I Y + +DGL +W+AI+ + + V+ YY
Sbjct: 465 SLCFPEAIKARGMESKE---------DIPYYFYRDDGLLVWEAIRTFTAEVVDIYYEGDQ 515
Query: 420 LVESDEELQAWWTEIRTVGHGDKKHEPWWPVLKTPKDLIEIITTIVWVTSGHHAAVNFGQ 479
+VE D ELQ + ++ G +K + +K+ + L E +T +++ S HAAVNFGQ
Sbjct: 516 VVEEDPELQDFVNDVYVYGMRGRKSSGFPKSVKSREQLSEYLTVVIFTASAQHAAVNFGQ 575
Query: 480 YTYGGYFPNRPTTARCNIATEDPSDEQWKFFLEKPENALLNTFPSQIQATKVMAILDVLS 539
Y + + PN P T R P + +E+ +++T P + ++ + + LS
Sbjct: 576 YDWASWIPNAPPTMRA-----PPPTAKGVVTIEQ----IVDTLPDRGRSCWHLGAVWALS 626
Query: 540 THSPDEEYLGKEIEPAWREDPVINAAFEKFRGKLMELEGIIDARNADPKLRNRNGAGMVP 599
+E +LG E + E PV A +FR L + +I RN + +L P
Sbjct: 627 QFQENELFLGMYPEEHFIEKPV-KEAMARFRKNLEAIVSVIAERNENLQL---------P 676
Query: 600 YELLKP 605
Y L P
Sbjct: 677 YYYLAP 682
>pdb|3V98|A Chain A, S663d Stable-5-Lox
pdb|3V98|B Chain B, S663d Stable-5-Lox
pdb|3V99|A Chain A, S663d Stable-5-Lox In Complex With Arachidonic Acid
pdb|3V99|B Chain B, S663d Stable-5-Lox In Complex With Arachidonic Acid
Length = 691
Score = 185 bits (469), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 140/486 (28%), Positives = 225/486 (46%), Gaps = 47/486 (9%)
Query: 120 WFRDEEFSRQTLAGLNPYSIRLITEWPLKSTLDPEIYGPPESAITTELIEKEIGGMISVE 179
W D F Q L G NP IR TE P K +TTE++E + +S+E
Sbjct: 244 WQEDLMFGYQFLNGANPVLIRRCTELPEKL------------PVTTEMVECSLERQLSLE 291
Query: 180 EAIKQKKLFILDYHDLFLPYVEKVRQLKSTTLYGSRTIFFLTPAGTLRPIAIELTRPPMN 239
+ ++Q +FI+D+ L K L + + A + PIAI+L + P +
Sbjct: 292 QEVQQGNIFIVDFELLDGIDANKTDPCTLQFLAAPICLLYKNLANKIVPIAIQLNQIPGD 351
Query: 240 GKPQWKQVFLPSWHSTECWLWKLAKAHVLAHDAGYHQLVSHWLRTHCCTEPYVIATNRQL 299
P +FLPS + W LAK V + D HQ ++H LRTH +E + IA RQL
Sbjct: 352 ENP----IFLPSDAKYD---WLLAKIWVRSSDFHVHQTITHLLRTHLVSEVFGIAMYRQL 404
Query: 300 SVMHPIYRLLDPHFRYTMEINGLARQALVNADGIIESSFSPGKYSMEFSSVAYDKQWRFD 359
+HPI++LL H R+T+ IN AR+ L+ G+ + + + G K +
Sbjct: 405 PAVHPIFKLLVAHVRFTIAINTKAREQLICECGLFDKANATGGGGHVQMVQRAMKDLTYA 464
Query: 360 HEALPKDLISRGLAVEDPSAPHGLKLTIEDYPFANDGLDLWDAIKQWVTDYVNHYYPDKS 419
P+ + +RG+ ++ I Y + +DGL +W+AI+ + + V+ YY
Sbjct: 465 SLCFPEAIKARGMESKE---------DIPYYFYRDDGLLVWEAIRTFTAEVVDIYYEGDQ 515
Query: 420 LVESDEELQAWWTEIRTVGHGDKKHEPWWPVLKTPKDLIEIITTIVWVTSGHHAAVNFGQ 479
+VE D ELQ + ++ G +K + +K+ + L E +T +++ S HAAVNFGQ
Sbjct: 516 VVEEDPELQDFVNDVYVYGMRGRKSSGFPKSVKSREQLSEYLTVVIFTASAQHAAVNFGQ 575
Query: 480 YTYGGYFPNRPTTARCNIATEDPSDEQWKFFLEKPENALLNTFPSQIQATKVMAILDVLS 539
Y + + PN P T R P + +E+ +++T P + ++ + + LS
Sbjct: 576 YDWASWIPNAPPTMRA-----PPPTAKGVVTIEQ----IVDTLPDRGRSCWHLGAVWALS 626
Query: 540 THSPDEEYLGKEIEPAWREDPVINAAFEKFRGKLMELEGIIDARNADPKLRNRNGAGMVP 599
+E +LG E + E PV A +FR L + +I RN + +L P
Sbjct: 627 QFQENELFLGMYPEEHFIEKPV-KEAMARFRKNLEAIVSVIAERNENLQL---------P 676
Query: 600 YELLKP 605
Y L P
Sbjct: 677 YYYLDP 682
>pdb|3DY5|A Chain A, Allene Oxide Synthase 8r-Lipoxygenase From Plexaura
Homomalla
pdb|3DY5|C Chain C, Allene Oxide Synthase 8r-Lipoxygenase From Plexaura
Homomalla
Length = 1066
Score = 176 bits (446), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 145/533 (27%), Positives = 242/533 (45%), Gaps = 75/533 (14%)
Query: 103 NILLFETPETMDRDKFFWFRDEEFSRQTLAGLNPYSIRLITEWPLKSTLDPEIYGPPESA 162
N +L TP DR W D F Q L G NP + P
Sbjct: 586 NWILGGTPNMADR----WHEDRWFGYQFLNGANPVILTRCDALP------------SNFP 629
Query: 163 ITTELIEKEIGGMISVEEAIKQKKLFILDY--------------HDLFLPYVEKVRQLKS 208
+T E + + +++E IK ++I+D+ D+ + ++ ++
Sbjct: 630 VTNEHVNASLDRGKNLDEEIKDGHIYIVDFKVLVGAKSYGGPVLEDIGYKVPDHLKHDEA 689
Query: 209 TTLYGSR--TIFFLTPAGTLRPIAIELTRPPMNGKPQWKQVFLPSWHSTECWLWKLAKAH 266
Y + +F++ G L PIAI++ + P P W H W +AK
Sbjct: 690 DIRYCAAPLALFYVNKLGHLMPIAIQINQEPGPENPIWTP------HEENEHDWMMAKFW 743
Query: 267 VLAHDAGYHQLVSHWLRTHCCTEPYVIATNRQLSVMHPIYRLLDPHFRYTMEINGLARQA 326
+ ++ +HQL +H LRTH TE + ++T R L+ HPI++LL PH + I+ + R+
Sbjct: 744 LGVAESNFHQLNTHLLRTHLTTESFALSTWRNLASAHPIFKLLQPHIYGVLAIDTIGRKE 803
Query: 327 LVNADGIIESSFS-PGKYSMEFSSVAYDKQWRFDHEALPKDLISRGLAVEDPSAPHGLKL 385
L+ + GI++ S S G + F + K+ LP L RG V+DPS G
Sbjct: 804 LIGSGGIVDQSLSLGGGGHVTFMEKCF-KEVNLQDYHLPNALKKRG--VDDPSKLPG--- 857
Query: 386 TIEDYPFANDGLDLWDAIKQWVTDYVNHYYPDKSLVESDEELQAWWTEIRT----VGHGD 441
+ + +DGL LW+AI+ ++ + + +Y + V+ D E+Q+W ++ V G
Sbjct: 858 ----FYYRDDGLALWEAIETFIGEIIAIFYKNDDDVKRDNEIQSWIYDVHKNGWRVNPGH 913
Query: 442 KKHE-PWWPVLKTPKDLIEIITTIVWVTSGHHAAVNFGQYTYGGYFPNRPTTARCNIATE 500
+ H P ++ + L E++T++V+ S HAAVNF Q + G+ PN P R
Sbjct: 914 QDHGVP--ASFESREQLKEVLTSLVFTFSCQHAAVNFSQKDHYGFTPNAPAILR-----H 966
Query: 501 DPSDEQWKFFLEKPENALLNTFPSQIQATKVMAILDVLSTHSPDEEYLGKEIEPAWREDP 560
P ++ + L+ ++L+T PS+ QA K +A + +L+ S DE YLG AW +
Sbjct: 967 PPPKKKGEATLQ----SILSTLPSKSQAAKAIATVYILTKFSEDERYLGNYSATAWEDKD 1022
Query: 561 VINAAFEKFRGKLMELEGIIDARNADPKLRNRNGAGMVPYELLKPFSEPGVTG 613
++ A +F+ KL ++ K++ RN VPY L P P T
Sbjct: 1023 ALD-AINRFQDKLEDIS---------KKIKQRNENLEVPYIYLLPERIPNGTA 1065
>pdb|3FG1|A Chain A, Crystal Structure Of Delta413-417:gs Lox
pdb|3FG1|B Chain B, Crystal Structure Of Delta413-417:gs Lox
pdb|3FG1|C Chain C, Crystal Structure Of Delta413-417:gs Lox
pdb|3FG1|D Chain D, Crystal Structure Of Delta413-417:gs Lox
Length = 696
Score = 176 bits (445), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 145/533 (27%), Positives = 242/533 (45%), Gaps = 75/533 (14%)
Query: 103 NILLFETPETMDRDKFFWFRDEEFSRQTLAGLNPYSIRLITEWPLKSTLDPEIYGPPESA 162
N +L TP DR W D F Q L G NP + P
Sbjct: 216 NWILGGTPNMADR----WHEDRWFGYQFLNGANPVILTRCDALP------------SNFP 259
Query: 163 ITTELIEKEIGGMISVEEAIKQKKLFILDY--------------HDLFLPYVEKVRQLKS 208
+T E + + +++E IK ++I+D+ D+ + ++ ++
Sbjct: 260 VTNEHVNASLDRGKNLDEEIKDGHIYIVDFKVLVGAKSYGGPVLEDIGYKVPDHLKHDEA 319
Query: 209 TTLYGSR--TIFFLTPAGTLRPIAIELTRPPMNGKPQWKQVFLPSWHSTECWLWKLAKAH 266
Y + +F++ G L PIAI++ + P P W H W +AK
Sbjct: 320 DIRYCAAPLALFYVNKLGHLMPIAIQINQEPGPENPIWTP------HEENEHDWMMAKFW 373
Query: 267 VLAHDAGYHQLVSHWLRTHCCTEPYVIATNRQLSVMHPIYRLLDPHFRYTMEINGLARQA 326
+ ++ +HQL +H LRTH TE + ++T R L+ HPI++LL PH + I+ + R+
Sbjct: 374 LGVAESNFHQLNTHLLRTHLTTESFALSTWRNLASAHPIFKLLQPHIYGVLAIDTIGRKE 433
Query: 327 LVNADGIIESSFS-PGKYSMEFSSVAYDKQWRFDHEALPKDLISRGLAVEDPSAPHGLKL 385
L+ + GI++ S S G + F + K+ LP L RG V+DPS G
Sbjct: 434 LIGSGGIVDQSLSLGGGGHVTFMEKCF-KEVNLQDYHLPNALKKRG--VDDPSKLPG--- 487
Query: 386 TIEDYPFANDGLDLWDAIKQWVTDYVNHYYPDKSLVESDEELQAWWTEIRT----VGHGD 441
+ + +DGL LW+AI+ ++ + + +Y + V+ D E+Q+W ++ V G
Sbjct: 488 ----FYYRDDGLALWEAIETFIGEIIAIFYKNDDDVKRDNEIQSWIYDVHKNGWRVNPGH 543
Query: 442 KKHE-PWWPVLKTPKDLIEIITTIVWVTSGHHAAVNFGQYTYGGYFPNRPTTARCNIATE 500
+ H P ++ + L E++T++V+ S HAAVNF Q + G+ PN P R
Sbjct: 544 QDHGVP--ASFESREQLKEVLTSLVFTFSCQHAAVNFSQKDHYGFTPNAPAILR-----H 596
Query: 501 DPSDEQWKFFLEKPENALLNTFPSQIQATKVMAILDVLSTHSPDEEYLGKEIEPAWREDP 560
P ++ + L+ ++L+T PS+ QA K +A + +L+ S DE YLG AW +
Sbjct: 597 PPPKKKGEATLQ----SILSTLPSKSQAAKAIATVYILTKFSEDERYLGNYSATAWEDKD 652
Query: 561 VINAAFEKFRGKLMELEGIIDARNADPKLRNRNGAGMVPYELLKPFSEPGVTG 613
++ A +F+ KL ++ K++ RN VPY L P P T
Sbjct: 653 ALD-AINRFQDKLEDIS---------KKIKQRNENLEVPYIYLLPERIPNGTA 695
>pdb|2FNQ|A Chain A, Insights From The X-Ray Crystal Structure Of Coral 8r-
Lipoxygenase: Calcium Activation Via A C2-Like Domain
And A Structural Basis Of Product Chirality
pdb|2FNQ|B Chain B, Insights From The X-Ray Crystal Structure Of Coral 8r-
Lipoxygenase: Calcium Activation Via A C2-Like Domain
And A Structural Basis Of Product Chirality
Length = 699
Score = 176 bits (445), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 144/533 (27%), Positives = 242/533 (45%), Gaps = 75/533 (14%)
Query: 103 NILLFETPETMDRDKFFWFRDEEFSRQTLAGLNPYSIRLITEWPLKSTLDPEIYGPPESA 162
N +L TP DR W D F Q L G NP + P
Sbjct: 219 NWILGGTPNMADR----WHEDRWFGYQFLNGANPVILTRCDALP------------SNFP 262
Query: 163 ITTELIEKEIGGMISVEEAIKQKKLFILDY--------------HDLFLPYVEKVRQLKS 208
+T E + + +++E IK ++I+D+ D+ + ++ ++
Sbjct: 263 VTNEHVNASLDRGKNLDEEIKDGHIYIVDFKVLVGAKSYGGPVLEDIGYKVPDHLKHDEA 322
Query: 209 TTLYGSR--TIFFLTPAGTLRPIAIELTRPPMNGKPQWKQVFLPSWHSTECWLWKLAKAH 266
Y + +F++ G L PIAI++ + P P W H W +AK
Sbjct: 323 DIRYCAAPLALFYVNKLGHLMPIAIQINQEPGPENPIWTP------HEENEHDWMMAKFW 376
Query: 267 VLAHDAGYHQLVSHWLRTHCCTEPYVIATNRQLSVMHPIYRLLDPHFRYTMEINGLARQA 326
+ ++ +HQL +H LRTH TE + ++T R L+ HP+++LL PH + I+ + R+
Sbjct: 377 LGVAESNFHQLNTHLLRTHLTTESFALSTWRNLASAHPVFKLLQPHIYGVLAIDTIGRKE 436
Query: 327 LVNADGIIESSFS-PGKYSMEFSSVAYDKQWRFDHEALPKDLISRGLAVEDPSAPHGLKL 385
L+ + GI++ S S G + F + K+ LP L RG V+DPS G
Sbjct: 437 LIGSGGIVDQSLSLGGGGHVTFMEKCF-KEVNLQDYHLPNALKKRG--VDDPSKLPG--- 490
Query: 386 TIEDYPFANDGLDLWDAIKQWVTDYVNHYYPDKSLVESDEELQAWWTEIRT----VGHGD 441
+ + +DGL LW+AI+ ++ + + +Y + V+ D E+Q+W ++ V G
Sbjct: 491 ----FYYRDDGLALWEAIETFIGEIIAIFYKNDDDVKRDNEIQSWIYDVHKNGWRVNPGH 546
Query: 442 KKHEPWWPV-LKTPKDLIEIITTIVWVTSGHHAAVNFGQYTYGGYFPNRPTTARCNIATE 500
+ H P ++ + L E++T++V+ S HAAVNF Q + G+ PN P R
Sbjct: 547 QDHGV--PASFESREQLKEVLTSLVFTFSCQHAAVNFSQKDHYGFTPNAPAVLR-----H 599
Query: 501 DPSDEQWKFFLEKPENALLNTFPSQIQATKVMAILDVLSTHSPDEEYLGKEIEPAWREDP 560
P ++ + L+ ++L+T PS+ QA K +A + +L+ S DE YLG AW +
Sbjct: 600 PPPKKKGEATLQ----SILSTLPSKSQAAKAIATVYILTKFSEDERYLGNYSATAWEDKD 655
Query: 561 VINAAFEKFRGKLMELEGIIDARNADPKLRNRNGAGMVPYELLKPFSEPGVTG 613
++ A +F+ KL ++ K++ RN VPY L P P T
Sbjct: 656 ALD-AINRFQDKLEDIS---------KKIKQRNENLEVPYIYLLPERIPNGTA 698
>pdb|3FG4|A Chain A, Crystal Structure Of Delta413-417:gs I805a Lox
pdb|3FG4|B Chain B, Crystal Structure Of Delta413-417:gs I805a Lox
pdb|3FG4|C Chain C, Crystal Structure Of Delta413-417:gs I805a Lox
pdb|3FG4|D Chain D, Crystal Structure Of Delta413-417:gs I805a Lox
Length = 696
Score = 175 bits (443), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 145/533 (27%), Positives = 241/533 (45%), Gaps = 75/533 (14%)
Query: 103 NILLFETPETMDRDKFFWFRDEEFSRQTLAGLNPYSIRLITEWPLKSTLDPEIYGPPESA 162
N +L TP DR W D F Q L G NP + P
Sbjct: 216 NWILGGTPNMADR----WHEDRWFGYQFLNGANPVILTRCDALP------------SNFP 259
Query: 163 ITTELIEKEIGGMISVEEAIKQKKLFILDY--------------HDLFLPYVEKVRQLKS 208
+T E + + +++E IK ++I+D+ D+ + ++ ++
Sbjct: 260 VTNEHVNASLDRGKNLDEEIKDGHIYIVDFKVLVGAKSYGGPVLEDIGYKVPDHLKHDEA 319
Query: 209 TTLYGSR--TIFFLTPAGTLRPIAIELTRPPMNGKPQWKQVFLPSWHSTECWLWKLAKAH 266
Y + +F++ G L PIAI++ + P P W H W +AK
Sbjct: 320 DIRYCAAPLALFYVNKLGHLMPIAIQINQEPGPENPIWTP------HEENEHDWMMAKFW 373
Query: 267 VLAHDAGYHQLVSHWLRTHCCTEPYVIATNRQLSVMHPIYRLLDPHFRYTMEINGLARQA 326
+ ++ +HQL +H LRTH TE + ++T R L+ HPI++LL PH + I+ + R+
Sbjct: 374 LGVAESNFHQLNTHLLRTHLTTESFALSTWRNLASAHPIFKLLQPHIYGVLAIDTIGRKE 433
Query: 327 LVNADGIIESSFS-PGKYSMEFSSVAYDKQWRFDHEALPKDLISRGLAVEDPSAPHGLKL 385
L + GI++ S S G + F + K+ LP L RG V+DPS G
Sbjct: 434 LAGSGGIVDQSLSLGGGGHVTFMEKCF-KEVNLQDYHLPNALKKRG--VDDPSKLPG--- 487
Query: 386 TIEDYPFANDGLDLWDAIKQWVTDYVNHYYPDKSLVESDEELQAWWTEIRT----VGHGD 441
+ + +DGL LW+AI+ ++ + + +Y + V+ D E+Q+W ++ V G
Sbjct: 488 ----FYYRDDGLALWEAIETFIGEIIAIFYKNDDDVKRDNEIQSWIYDVHKNGWRVNPGH 543
Query: 442 KKHE-PWWPVLKTPKDLIEIITTIVWVTSGHHAAVNFGQYTYGGYFPNRPTTARCNIATE 500
+ H P ++ + L E++T++V+ S HAAVNF Q + G+ PN P R
Sbjct: 544 QDHGVP--ASFESREQLKEVLTSLVFTFSCQHAAVNFSQKDHYGFTPNAPAILR-----H 596
Query: 501 DPSDEQWKFFLEKPENALLNTFPSQIQATKVMAILDVLSTHSPDEEYLGKEIEPAWREDP 560
P ++ + L+ ++L+T PS+ QA K +A + +L+ S DE YLG AW +
Sbjct: 597 PPPKKKGEATLQ----SILSTLPSKSQAAKAIATVYILTKFSEDERYLGNYSATAWEDKD 652
Query: 561 VINAAFEKFRGKLMELEGIIDARNADPKLRNRNGAGMVPYELLKPFSEPGVTG 613
++ A +F+ KL ++ K++ RN VPY L P P T
Sbjct: 653 ALD-AINRFQDKLEDIS---------KKIKQRNENLEVPYIYLLPERIPNGTA 695
>pdb|3FG3|A Chain A, Crystal Structure Of Delta413-417:gs I805w Lox
pdb|3FG3|B Chain B, Crystal Structure Of Delta413-417:gs I805w Lox
pdb|3FG3|C Chain C, Crystal Structure Of Delta413-417:gs I805w Lox
pdb|3FG3|D Chain D, Crystal Structure Of Delta413-417:gs I805w Lox
Length = 696
Score = 173 bits (439), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 145/533 (27%), Positives = 241/533 (45%), Gaps = 75/533 (14%)
Query: 103 NILLFETPETMDRDKFFWFRDEEFSRQTLAGLNPYSIRLITEWPLKSTLDPEIYGPPESA 162
N +L TP DR W D F Q L G NP + P
Sbjct: 216 NWILGGTPNMADR----WHEDRWFGYQFLNGANPVILTRCDALP------------SNFP 259
Query: 163 ITTELIEKEIGGMISVEEAIKQKKLFILDY--------------HDLFLPYVEKVRQLKS 208
+T E + + +++E IK ++I+D+ D+ + ++ ++
Sbjct: 260 VTNEHVNASLDRGKNLDEEIKDGHIYIVDFKVLVGAKSYGGPVLEDIGYKVPDHLKHDEA 319
Query: 209 TTLYGSR--TIFFLTPAGTLRPIAIELTRPPMNGKPQWKQVFLPSWHSTECWLWKLAKAH 266
Y + +F++ G L PIAI++ + P P W H W +AK
Sbjct: 320 DIRYCAAPLALFYVNKLGHLMPIAIQINQEPGPENPIWTP------HEENEHDWMMAKFW 373
Query: 267 VLAHDAGYHQLVSHWLRTHCCTEPYVIATNRQLSVMHPIYRLLDPHFRYTMEINGLARQA 326
+ ++ +HQL +H LRTH TE + ++T R L+ HPI++LL PH + I+ + R+
Sbjct: 374 LGVAESNFHQLNTHLLRTHLTTESFALSTWRNLASAHPIFKLLQPHIYGVLAIDTIGRKE 433
Query: 327 LVNADGIIESSFS-PGKYSMEFSSVAYDKQWRFDHEALPKDLISRGLAVEDPSAPHGLKL 385
L + GI++ S S G + F + K+ LP L RG V+DPS G
Sbjct: 434 LWGSGGIVDQSLSLGGGGHVTFMEKCF-KEVNLQDYHLPNALKKRG--VDDPSKLPG--- 487
Query: 386 TIEDYPFANDGLDLWDAIKQWVTDYVNHYYPDKSLVESDEELQAWWTEIRT----VGHGD 441
+ + +DGL LW+AI+ ++ + + +Y + V+ D E+Q+W ++ V G
Sbjct: 488 ----FYYRDDGLALWEAIETFIGEIIAIFYKNDDDVKRDNEIQSWIYDVHKNGWRVNPGH 543
Query: 442 KKHE-PWWPVLKTPKDLIEIITTIVWVTSGHHAAVNFGQYTYGGYFPNRPTTARCNIATE 500
+ H P ++ + L E++T++V+ S HAAVNF Q + G+ PN P R
Sbjct: 544 QDHGVP--ASFESREQLKEVLTSLVFTFSCQHAAVNFSQKDHYGFTPNAPAILR-----H 596
Query: 501 DPSDEQWKFFLEKPENALLNTFPSQIQATKVMAILDVLSTHSPDEEYLGKEIEPAWREDP 560
P ++ + L+ ++L+T PS+ QA K +A + +L+ S DE YLG AW +
Sbjct: 597 PPPKKKGEATLQ----SILSTLPSKSQAAKAIATVYILTKFSEDERYLGNYSATAWEDKD 652
Query: 561 VINAAFEKFRGKLMELEGIIDARNADPKLRNRNGAGMVPYELLKPFSEPGVTG 613
++ A +F+ KL ++ K++ RN VPY L P P T
Sbjct: 653 ALD-AINRFQDKLEDIS---------KKIKQRNENLEVPYIYLLPERIPNGTA 695
>pdb|3VF1|A Chain A, Structure Of A Calcium-Dependent 11r-Lipoxygenase Suggests
A Mechanism For Ca-Regulation
pdb|3VF1|B Chain B, Structure Of A Calcium-Dependent 11r-Lipoxygenase Suggests
A Mechanism For Ca-Regulation
Length = 698
Score = 168 bits (425), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 141/498 (28%), Positives = 222/498 (44%), Gaps = 61/498 (12%)
Query: 119 FWFRDEEFSRQTLAGLNPYSIRLITEWPLKSTLDPEIYGPPESAITTELIEKEIGGMISV 178
+W D F Q L G NP IR + P + E++EK + ++
Sbjct: 250 YWRDDVWFGSQFLNGSNPEVIRRCDKLP------------ENFPVKNEMVEKLLDRGYTL 297
Query: 179 EEAIKQKKLFILDYHDL-FLPYVEKVRQLKSTTLYGSRTIFFLTPAGTLRPIAIELTRPP 237
E+A+K+ +FI DY L +P ++ + T +F+L + PIAI+L + P
Sbjct: 298 EKAMKEGLIFITDYKILEGIPTMDTPEDKRYITT--PLGLFYLKNNDDIIPIAIQLYQQP 355
Query: 238 MNGKPQWKQVFLPSWHSTECWLWKLAKAHVLAHDAGYHQLVSHWLRTHCCTEPYVIATNR 297
W + TE W W +AK + D YHQ+++H LR H EP +++ R
Sbjct: 356 GENNSIWTPL-----KDTE-WDWIMAKLWLRCADTQYHQMITHLLRCHLMMEPTAVSSWR 409
Query: 298 QLSVMHPIYRLLDPHFRYTMEINGLARQALVNADGIIESSFSPGKYSMEFSSVAYDKQWR 357
L +HP+++LL PH + M IN L R L+ G + S G + +
Sbjct: 410 NLPSVHPVWKLLYPHTKGIMAINTLGRNDLIPTGGAADKVLSIGGGGQVTLMQKHYRSVT 469
Query: 358 FDHEALPKDLISRGLAVEDPSAPHGLKLTIEDYPFANDGLDLWDAIKQWVTDYVNHYYPD 417
FD L KDL RG+ GL+ + + +D L LW+ I Q+V D + YY D
Sbjct: 470 FDSYDLVKDLRQRGV--------DGLR----KFYYKDDALLLWNVIHQFVQDIIQIYYND 517
Query: 418 KSLVESDEELQAWWTEIRTVGH-----GDKKHEPWWPVLKTPKDLIEIITTIVWVTSGHH 472
V+ D E+Q W ++ G+ G K P + ++L+ +T +V+ S H
Sbjct: 518 DDSVKKDNEIQDWIRDLHENGYPAGSDGTDKKVP--KSFENREELVHFLTVVVFTCSCQH 575
Query: 473 AAVNFGQYTYGGYFPNRPTTARCNIATEDPSDEQWKFFLEKPENALLNTFPSQIQATKVM 532
AAVNF Q G+ PN PT R + P E+ K ++ + ++ QA ++
Sbjct: 576 AAVNFSQMATYGFHPNSPTLMR-----QPPPTEKGK----SNHKVIMASLANKHQAVTMV 626
Query: 533 AILDVLSTHSPDEEYLGKEIEPAWREDPVINAAFEKFRGKLMELEGIIDARNADPKLRNR 592
++++ L+T P E++LG + + D +AA KF+ L + I RN
Sbjct: 627 SVVNALTTIYPTEKFLGDYADNLF-GDAAAHAAMAKFKSNLANITKQITERN-------- 677
Query: 593 NGAGMV-PYELLKPFSEP 609
GMV PY L P P
Sbjct: 678 --QGMVSPYTWLIPGHVP 693
>pdb|3RDE|A Chain A, Crystal Structure Of The Catalytic Domain Of Porcine
Leukocyte 12- Lipoxygenase
pdb|3RDE|B Chain B, Crystal Structure Of The Catalytic Domain Of Porcine
Leukocyte 12- Lipoxygenase
pdb|3RDE|C Chain C, Crystal Structure Of The Catalytic Domain Of Porcine
Leukocyte 12- Lipoxygenase
pdb|3RDE|D Chain D, Crystal Structure Of The Catalytic Domain Of Porcine
Leukocyte 12- Lipoxygenase
Length = 573
Score = 160 bits (405), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 157/526 (29%), Positives = 224/526 (42%), Gaps = 75/526 (14%)
Query: 86 WNTLLPRLVKAIEDTGDNILLFETPETMDRDKFFWFRDEEFSRQTLAGLNPYSIRLITEW 145
WN+L D+ + I + +R + W D F Q L G NP +R E
Sbjct: 108 WNSL---------DSFNRIFWSGQSKLAERVRDSWKEDALFGYQFLNGTNPMLLRHSVEL 158
Query: 146 PLKSTLDPEIYGPPESAITTELIEKEIGGMISVEEAIKQKKLFILDYHDLFLPYVEKVRQ 205
P + + PP +EKE+ G LF D+ L ++
Sbjct: 159 PAR------LKFPPGMEELQAQLEKELQG----------GTLFEADFS--LLDGIKANVI 200
Query: 206 LKSTTLYGSRTIFF-LTPAGTLRPIAIELTRPPMNGKPQWKQVFLPSWHSTECWLWKLAK 264
L S + L P G L P+ I+L + P G P +FLP+ +W LAK
Sbjct: 201 LSSQQYLAVPLVMLKLQPDGKLLPMVIQL-QLPREGSP-LPPLFLPT---DPPMVWLLAK 255
Query: 265 AHVLAHDAGYHQLVSHWLRTHCCTEPYVIATNRQLSVMHPIYRLLDPHFRYTMEINGLAR 324
V + D H+L SH LR H E +AT R L +HPI++LL PHFRYTMEIN AR
Sbjct: 256 CWVRSSDFQLHELHSHLLRGHLMAEVIAVATMRCLPSIHPIFKLLIPHFRYTMEINVRAR 315
Query: 325 QALVNADGIIESSFSPGKYSMEFSSVAYDKQWRFDHEALPKDLISRGLAVEDPSAPHGLK 384
LV+ GI + S G + P DL RGL
Sbjct: 316 NGLVSDLGIFDQVVSTGGGGHVELLRRAAALLTYSSFCPPDDLADRGL------------ 363
Query: 385 LTIEDYPFANDGLDLWDAIKQWVTDYVNHYYPDKSLVESDEELQAW---WTEIRTVGHGD 441
L +E +A D L LW+ I ++V V+ +Y V+ D ELQAW +TEI +G D
Sbjct: 364 LGVESSFYAQDALRLWEVISRYVEGIVSLHYKTDESVKEDFELQAWCREFTEIGLLGAQD 423
Query: 442 KKHEPWWPV-LKTPKDLIEIITTIVWVTSGHHAAVNFGQYTYGGYFPNRPTTARC-NIAT 499
+ +PV L++ + L +T ++ +G H++ + GQ + + PN P T R T
Sbjct: 424 RG----FPVSLQSKEQLCHFVTMCIFTCTGQHSSNHLGQLDWYTWVPNAPCTMRLPPPTT 479
Query: 500 EDPSDEQWKFFLEKPENALLNTFPSQIQATKVMAILDVLSTHSPDEEYLGKEIEPAWRED 559
+D + E ++ T P+ QA+ M+I L P LG+ E +
Sbjct: 480 KDATLE-----------TVMATLPNFHQASLQMSITWQLGRCQPTMVALGQH-EEEYFSG 527
Query: 560 PVINAAFEKFRGKLMELEGIIDARNADPKLRNRNGAGMVPYELLKP 605
P A KFR +L L+ I+ RNA L PYE L+P
Sbjct: 528 PGPKAVLTKFREELAALDKDIEVRNAKLAL---------PYEYLRP 564
>pdb|1LOX|A Chain A, Rabbit Reticulocyte 15-Lipoxygenase
Length = 662
Score = 156 bits (394), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 139/490 (28%), Positives = 207/490 (42%), Gaps = 62/490 (12%)
Query: 120 WFRDEEFSRQTLAGLNPYSIRLITEWPLKSTLDPEIYGPPESAITTELIEKEIGGMISVE 179
W D F Q L G NP +R + P + PP +EKE+
Sbjct: 222 WQEDSLFGYQFLNGANPMLLRRSVQLPARLVF------PPGMEELQAQLEKEL------- 268
Query: 180 EAIKQKKLFILDYHDLFLPYVEKVRQLKSTTLYGSRTIFFLTPAGTLRPIAIELTRPPMN 239
K LF D+ L V L + L P G L P+ I+L P +
Sbjct: 269 ---KAGTLFEADFA-LLDNIKANVILYCQQYLAAPLVMLKLQPDGKLMPMVIQLHLPKIG 324
Query: 240 GKPQWKQVFLPSWHSTECWLWKLAKAHVLAHDAGYHQLVSHWLRTHCCTEPYVIATNRQL 299
P +FLP+ +W LAK V + D H+L SH LR H E + +AT R L
Sbjct: 325 SSP--PPLFLPT---DPPMVWLLAKCWVRSSDFQVHELNSHLLRGHLMAEVFTVATMRCL 379
Query: 300 SVMHPIYRLLDPHFRYTMEINGLARQALVNADGI---IESSFSPGKYSMEFSSVAYDKQW 356
+HP+++L+ PH RYT+EIN AR LV+ GI I S+ G + + A+
Sbjct: 380 PSIHPVFKLIVPHLRYTLEINVRARNGLVSDFGIFDQIMSTGGGGHVQLLQQAGAFLTYR 439
Query: 357 RFDHEALPKDLISRGLAVEDPSAPHGLKLTIEDYPFANDGLDLWDAIKQWVTDYVNHYYP 416
F P DL RGL L +E +A D L LW+ I ++V + YY
Sbjct: 440 SF---CPPDDLADRGL------------LGVESSFYAQDALRLWEIISRYVQGIMGLYYK 484
Query: 417 DKSLVESDEELQAWWTEIRTVGHGDKKHEPWWPVLKTPKDLIEIITTIVWVTSGHHAAVN 476
V D ELQ+W EI +G + + + L++ +T ++ +G H++++
Sbjct: 485 TDEAVRDDLELQSWCREITEIGLQGAQKQGFPTSLQSVAQACHFVTMCIFTCTGQHSSIH 544
Query: 477 FGQYTYGGYFPNRPTTARC-NIATEDPSDEQWKFFLEKPENALLNTFPSQIQATKVMAIL 535
GQ + + PN P T R T+D + E ++ T P+ Q++ M+I+
Sbjct: 545 LGQLDWFTWVPNAPCTMRLPPPTTKDATLE-----------TVMATLPNLKQSSLQMSIV 593
Query: 536 DVLSTHSPDEEYLGKEIEPAWREDPVINAAFEKFRGKLMELEGIIDARNADPKLRNRNGA 595
L P LG+ E + P A EKFR +L ++ I+ RN
Sbjct: 594 WQLGRDQPIMVPLGQHQE-EYFSGPEPRAVLEKFREELAIMDKEIEVRNEKLD------- 645
Query: 596 GMVPYELLKP 605
+PYE L+P
Sbjct: 646 --IPYEYLRP 653
>pdb|2P0M|A Chain A, Revised Structure Of Rabbit Reticulocyte 15s-Lipoxygenase
pdb|2P0M|B Chain B, Revised Structure Of Rabbit Reticulocyte 15s-Lipoxygenase
Length = 662
Score = 155 bits (393), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 139/490 (28%), Positives = 207/490 (42%), Gaps = 62/490 (12%)
Query: 120 WFRDEEFSRQTLAGLNPYSIRLITEWPLKSTLDPEIYGPPESAITTELIEKEIGGMISVE 179
W D F Q L G NP +R + P + PP +EKE+
Sbjct: 222 WQEDSLFGYQFLNGANPMLLRRSVQLPARLVF------PPGMEELQAQLEKEL------- 268
Query: 180 EAIKQKKLFILDYHDLFLPYVEKVRQLKSTTLYGSRTIFFLTPAGTLRPIAIELTRPPMN 239
K LF D+ L V L + L P G L P+ I+L P +
Sbjct: 269 ---KAGTLFEADFA-LLDNIKANVILYCQQYLAAPLVMLKLQPDGKLMPMVIQLHLPKIG 324
Query: 240 GKPQWKQVFLPSWHSTECWLWKLAKAHVLAHDAGYHQLVSHWLRTHCCTEPYVIATNRQL 299
P +FLP+ +W LAK V + D H+L SH LR H E + +AT R L
Sbjct: 325 SSP--PPLFLPT---DPPMVWLLAKCWVRSSDFQVHELNSHLLRGHLMAEVFTVATMRCL 379
Query: 300 SVMHPIYRLLDPHFRYTMEINGLARQALVNADGI---IESSFSPGKYSMEFSSVAYDKQW 356
+HP+++L+ PH RYT+EIN AR LV+ GI I S+ G + + A+
Sbjct: 380 PSIHPVFKLIVPHLRYTLEINVRARNGLVSDFGIFDQIMSTGGGGHVQLLQQAGAFLTYR 439
Query: 357 RFDHEALPKDLISRGLAVEDPSAPHGLKLTIEDYPFANDGLDLWDAIKQWVTDYVNHYYP 416
F P DL RGL L +E +A D L LW+ I ++V + YY
Sbjct: 440 SF---CPPDDLADRGL------------LGVESSFYAQDALRLWEIISRYVQGIMGLYYK 484
Query: 417 DKSLVESDEELQAWWTEIRTVGHGDKKHEPWWPVLKTPKDLIEIITTIVWVTSGHHAAVN 476
V D ELQ+W EI +G + + + L++ +T ++ +G H++++
Sbjct: 485 TDEAVRDDLELQSWCREITEIGLQGAQKQGFPTSLQSVAQACHFVTMCIFTCTGQHSSIH 544
Query: 477 FGQYTYGGYFPNRPTTARC-NIATEDPSDEQWKFFLEKPENALLNTFPSQIQATKVMAIL 535
GQ + + PN P T R T+D + E ++ T P+ Q++ M+I+
Sbjct: 545 LGQLDWFTWVPNAPCTMRLPPPTTKDATLE-----------TVMATLPNLHQSSLQMSIV 593
Query: 536 DVLSTHSPDEEYLGKEIEPAWREDPVINAAFEKFRGKLMELEGIIDARNADPKLRNRNGA 595
L P LG+ E + P A EKFR +L ++ I+ RN
Sbjct: 594 WQLGRDQPIMVPLGQHQE-EYFSGPEPRAVLEKFREELAIMDKEIEVRNEKLD------- 645
Query: 596 GMVPYELLKP 605
+PYE L+P
Sbjct: 646 --IPYEYLRP 653
>pdb|3D3L|A Chain A, The 2.6 A Crystal Structure Of The Lipoxygenase Domain Of
Human Arachidonate 12-Lipoxygenase, 12s-Type (Casp
Target)
pdb|3D3L|B Chain B, The 2.6 A Crystal Structure Of The Lipoxygenase Domain Of
Human Arachidonate 12-Lipoxygenase, 12s-Type (Casp
Target)
Length = 541
Score = 155 bits (392), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 146/504 (28%), Positives = 206/504 (40%), Gaps = 53/504 (10%)
Query: 102 DNILLFETPETMDRDKFFWFRDEEFSRQTLAGLNPYSIRLITEWPLKSTLDPEIYGPPES 161
D I + ++ + W DE FS Q L G NP +R T P + L P
Sbjct: 50 DQIFWGQKSALAEKVRQCWQDDELFSYQFLNGANPMLLRRSTSLPSRLVL------PSGM 103
Query: 162 AITTELIEKEIGGMISVEEAIKQKKLFILDYHDLFLPYVEKVRQLKSTTLYGSRTIFFLT 221
+EKE+ + LF D+ L +R K L + +
Sbjct: 104 EELRAQLEKEL----------QNGSLFEADFILLDGIPANVIRGEKQY-LAAPLVMLKME 152
Query: 222 PAGTLRPIAIELTRPPMNGKPQWKQVFLPSWHSTECWLWKLAKAHVLAHDAGYHQLVSHW 281
P G L+P+ I++ N +FLPS W LAK+ V D H++ H
Sbjct: 153 PNGKLQPMVIQIQP--PNPSSPTPTLFLPS---DPPLAWLLAKSWVRNSDFQLHEIQYHL 207
Query: 282 LRTHCCTEPYVIATNRQLSVMHPIYRLLDPHFRYTMEINGLARQALVNADGIIESSFSPG 341
L TH E +AT R L +HPI++ L PH RYTMEIN AR L++ GI + + S G
Sbjct: 208 LNTHLVAEVIAVATMRCLPGLHPIFKFLIPHIRYTMEINTRARTQLISDGGIFDKAVSTG 267
Query: 342 KYSMEFSSVAYDKQWRFDHEALPKDLISRGLAVEDPSAPHGLKLTIEDYPFANDGLDLWD 401
Q + P DL RGL L + +A+D L LW+
Sbjct: 268 GGGHVQLLRRAAAQLTYCSLCPPDDLADRGL------------LGLPGALYAHDALRLWE 315
Query: 402 AIKQWVTDYVNHYYPDKSLVESDEELQAWWTEIRTVGHGDKKHEPWWPVLKTPKDLIEII 461
I ++V V+ +Y +V+ D ELQAW EI VG + + ++ L +
Sbjct: 316 IIARYVEGIVHLFYQRDDIVKGDPELQAWCREITEVGLCQAQDRGFPVSFQSQSQLCHFL 375
Query: 462 TTIVWVTSGHHAAVNFGQYTYGGYFPNRPTTARCNIATEDPSDEQWKFFLEKPENALLNT 521
T V+ + HAA+N GQ + + PN P T R P+ ++ + ++ +
Sbjct: 376 TMCVFTCTAQHAAINQGQLDWYAWVPNAPCTMR----MPPPTTKE-----DVTMATVMGS 426
Query: 522 FPSQIQATKVMAILDVLSTHSPDEEYLGKEIEPAWREDPVINAAFEKFRGKLMELEGIID 581
P QA MAI LS PD LG E + P A +FR L +LE I
Sbjct: 427 LPDVRQACLQMAISWHLSRRQPDMVPLGHHKE-KYFSGPKPKAVLNQFRTDLEKLEKEIT 485
Query: 582 ARNADPKLRNRNGAGMVPYELLKP 605
ARN PYE LKP
Sbjct: 486 ARNEQLDW---------PYEYLKP 500
>pdb|3DS0|A Chain A, Hiv-1 Capsid C-Terminal Domain Mutant (N183a) In Complex
With An Inhibitor Of Particle Assembly (Cai)
pdb|3DS5|A Chain A, Hiv-1 Capsid C-Terminal Domain Mutant (N183a)
pdb|3DS5|B Chain B, Hiv-1 Capsid C-Terminal Domain Mutant (N183a)
pdb|3DS5|C Chain C, Hiv-1 Capsid C-Terminal Domain Mutant (N183a)
pdb|3DS5|D Chain D, Hiv-1 Capsid C-Terminal Domain Mutant (N183a)
Length = 86
Score = 33.9 bits (76), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 36/80 (45%), Gaps = 1/80 (1%)
Query: 397 LDLWDAIKQWVTDYVNHYYPDKSLVESDEELQAWWTEIRTVGHGDKKHEPWWPVLKTPKD 456
LD+ K+ DYV+ +Y ++ +E++AW TE V + + + L
Sbjct: 6 LDIRQGPKEPFRDYVDRFYKTLRAEQASQEVKAWMTETLLVQNANPDCKTILKALGPGAT 65
Query: 457 LIEIITTIVWVTS-GHHAAV 475
L E++T V GH A V
Sbjct: 66 LEEMMTACQGVGGPGHKARV 85
>pdb|4EGV|A Chain A, Crystal Structure Of A Monomeric Scp2-Thiolase Like
Protein Type 1 (Stlp1) From Mycobacterium Smegmatis
pdb|4EGV|B Chain B, Crystal Structure Of A Monomeric Scp2-Thiolase Like
Protein Type 1 (Stlp1) From Mycobacterium Smegmatis
pdb|4EGV|C Chain C, Crystal Structure Of A Monomeric Scp2-Thiolase Like
Protein Type 1 (Stlp1) From Mycobacterium Smegmatis
pdb|4EGV|D Chain D, Crystal Structure Of A Monomeric Scp2-Thiolase Like
Protein Type 1 (Stlp1) From Mycobacterium Smegmatis
pdb|4EGV|E Chain E, Crystal Structure Of A Monomeric Scp2-Thiolase Like
Protein Type 1 (Stlp1) From Mycobacterium Smegmatis
pdb|4EGV|F Chain F, Crystal Structure Of A Monomeric Scp2-Thiolase Like
Protein Type 1 (Stlp1) From Mycobacterium Smegmatis
Length = 520
Score = 29.6 bits (65), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Query: 326 ALVNADGIIESSFSPGKYSMEFSSVAYDK--QWRFDHEALPKDLIS 369
ALV A+G I S +S G YS E + D Q + +H+A PK I+
Sbjct: 403 ALVGANGGIASKYSVGIYSTEPADWVADNSAQLQAEHDAQPKVAIT 448
>pdb|1BWD|A Chain A, Inosamine-Phosphate Amidinotransferase Strb1 From
Streptomyces Griseus
pdb|1BWD|B Chain B, Inosamine-Phosphate Amidinotransferase Strb1 From
Streptomyces Griseus
Length = 348
Score = 29.3 bits (64), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 27/58 (46%), Gaps = 8/58 (13%)
Query: 415 YPDKSLVESDEELQAWWTEIRTVGHGDKKHEPWWPVLKTPKDLIEIITTIVWVTSGHH 472
YPD+ L E++EEL E+ +G ++ P+D +I T W T G H
Sbjct: 53 YPDRVLKETEEELHVLAAELTKLGVTVRR--------PGPRDHSALIKTPDWETDGFH 102
>pdb|4DZH|A Chain A, Crystal Structure Of An Adenosine Deaminase From
Xanthomonas Campestris (Target Nysgrc-200456) With Bound
Zn
Length = 472
Score = 28.9 bits (63), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 18/27 (66%), Gaps = 2/27 (7%)
Query: 542 SPDEEYLGK--EIEPAWREDPVINAAF 566
S D+EY + E+ WR+DP+I+ AF
Sbjct: 172 SSDDEYFARAGELHDQWRDDPLISTAF 198
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.137 0.431
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 21,102,977
Number of Sequences: 62578
Number of extensions: 956701
Number of successful extensions: 2257
Number of sequences better than 100.0: 34
Number of HSP's better than 100.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 2090
Number of HSP's gapped (non-prelim): 34
length of query: 622
length of database: 14,973,337
effective HSP length: 105
effective length of query: 517
effective length of database: 8,402,647
effective search space: 4344168499
effective search space used: 4344168499
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 54 (25.4 bits)