Query 007000
Match_columns 622
No_of_seqs 299 out of 2706
Neff 7.1
Searched_HMMs 29240
Date Mon Mar 25 14:33:06 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/007000.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/007000hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1v0w_A Phospholipase D; hydrol 99.9 7E-27 2.4E-31 260.4 14.3 155 251-463 67-224 (506)
2 3hsi_A Phosphatidylserine synt 99.9 7.1E-26 2.4E-30 248.3 10.2 261 216-590 23-309 (458)
3 2fk9_A Protein kinase C, ETA t 99.9 4.5E-22 1.6E-26 187.6 12.2 134 30-188 18-156 (157)
4 2ep6_A MCTP2 protein; beta san 99.8 9.6E-21 3.3E-25 173.0 14.5 127 32-188 4-131 (133)
5 3b7y_A E3 ubiquitin-protein li 99.8 8.9E-20 3.1E-24 170.4 15.7 122 41-189 20-153 (153)
6 1wfj_A Putative elicitor-respo 99.8 1.9E-20 6.7E-25 171.3 10.6 122 39-191 8-132 (136)
7 1gmi_A Protein kinase C, epsil 99.8 4.2E-20 1.4E-24 169.5 12.6 128 38-189 3-133 (136)
8 3kwu_A MUNC13-1; calcium bindi 99.8 2.8E-19 9.7E-24 166.1 17.7 119 40-188 16-146 (148)
9 2dmh_A Myoferlin; beta-sandwic 99.8 1.1E-19 3.8E-24 167.1 14.6 122 40-191 6-135 (140)
10 1rlw_A Phospholipase A2, CALB 99.8 2.5E-19 8.4E-24 161.7 12.6 121 40-189 2-125 (126)
11 3m7f_B E3 ubiquitin-protein li 99.8 7.6E-19 2.6E-23 168.3 15.6 124 40-190 7-142 (176)
12 4ggj_A Mitochondrial cardiolip 99.8 3.4E-19 1.2E-23 174.1 10.9 132 251-464 47-179 (196)
13 2nq3_A Itchy homolog E3 ubiqui 99.8 1.9E-18 6.6E-23 165.5 12.4 124 38-190 33-162 (173)
14 1rsy_A Synaptotagmin I; calciu 99.8 3.2E-18 1.1E-22 159.9 12.8 116 28-169 25-150 (152)
15 3pyc_A E3 ubiquitin-protein li 99.8 5.3E-18 1.8E-22 154.5 13.5 120 41-187 5-131 (132)
16 2b3r_A Phosphatidylinositol-4- 99.8 6.6E-18 2.2E-22 154.7 13.2 109 34-169 13-130 (134)
17 2r83_A Synaptotagmin-1; C2A-C2 99.7 6.6E-18 2.2E-22 173.5 14.6 178 39-249 17-204 (284)
18 3f04_A Synaptotagmin-1; C2A, c 99.7 2.6E-18 8.9E-23 158.6 10.1 104 39-168 32-141 (143)
19 1a25_A CALB, protein kinase C 99.7 9.4E-18 3.2E-22 156.2 12.3 106 37-169 27-139 (149)
20 2d8k_A Synaptotagmin VII; exoc 99.7 1.5E-17 5E-22 153.3 12.7 106 39-170 24-136 (141)
21 2z0u_A WW domain-containing pr 99.7 4E-18 1.4E-22 160.3 8.8 105 38-168 40-154 (155)
22 3fdw_A Synaptotagmin-like prot 99.7 4.7E-18 1.6E-22 158.0 8.7 111 37-172 19-137 (148)
23 2bwq_A Regulating synaptic mem 99.7 1.9E-17 6.4E-22 149.9 11.4 103 38-167 15-128 (129)
24 3rdl_A Protein kinase C alpha 99.7 2.2E-17 7.6E-22 150.8 11.9 106 38-170 13-125 (137)
25 1rh8_A Piccolo protein; beta-s 99.7 6E-18 2E-22 155.9 8.0 108 37-170 14-139 (142)
26 1wfm_A Synaptotagmin XIII; C2 99.7 2.7E-17 9.3E-22 151.3 12.3 103 39-170 24-133 (138)
27 2q3x_A Regulating synaptic mem 99.7 1.9E-17 6.5E-22 158.0 11.7 108 38-170 27-140 (171)
28 1w15_A Synaptotagmin IV; metal 99.7 1.7E-17 5.8E-22 155.0 10.3 111 35-173 24-142 (153)
29 2chd_A Rabphilin-3A, exophilin 99.7 2.8E-17 9.6E-22 151.5 11.4 105 39-169 27-140 (142)
30 1v27_A Regulating synaptic mem 99.7 2E-17 6.9E-22 151.9 9.6 107 38-171 18-135 (141)
31 2dmg_A KIAA1228 protein; beta- 99.7 3.1E-17 1.1E-21 151.2 10.7 106 39-171 22-137 (142)
32 3fbk_A RGS3, RGP3, regulator o 99.7 5.5E-17 1.9E-21 151.8 12.4 111 33-170 19-138 (153)
33 1xdp_A Polyphosphate kinase; P 99.7 1E-16 3.6E-21 182.4 16.4 197 251-586 348-562 (687)
34 2o8r_A Polyphosphate kinase; s 99.7 2E-17 7E-22 187.0 10.0 200 251-586 353-569 (705)
35 3n5a_A Synaptotagmin-7; calciu 99.7 2.2E-17 7.6E-22 150.9 7.9 108 39-174 14-129 (138)
36 2enp_A B/K protein; C2 type 1, 99.7 3.9E-17 1.3E-21 151.5 9.3 114 36-169 21-141 (147)
37 1tjx_A Similar to synaptotagmi 99.7 1.4E-16 4.7E-21 149.9 12.8 96 34-155 18-121 (159)
38 1byr_A Protein (endonuclease); 99.7 1.8E-16 6E-21 148.1 13.4 132 251-462 15-148 (155)
39 2cm5_A Rabphilin-3A; protein t 99.7 4.8E-17 1.6E-21 154.2 9.1 111 35-173 31-149 (166)
40 1ugk_A Synaptotagmin IV, KIAA1 99.7 1.3E-16 4.4E-21 146.4 11.6 108 37-169 18-133 (138)
41 4gel_A Mitochondrial cardiolip 99.7 2.4E-17 8.2E-22 163.4 7.1 154 246-464 54-211 (220)
42 1dqv_A Synaptotagmin III; beta 99.7 1.5E-16 5E-21 164.9 12.1 177 39-250 18-207 (296)
43 2cjt_A UNC-13 homolog A, MUNC1 99.7 3.7E-16 1.3E-20 142.7 11.4 115 40-187 4-130 (131)
44 3l9b_A Otoferlin; C2-domain, b 99.6 1.6E-15 5.5E-20 138.5 12.0 116 42-191 22-142 (144)
45 3jzy_A Intersectin 2; C2 domai 99.6 6.7E-15 2.3E-19 163.4 13.4 117 39-188 385-507 (510)
46 2cjs_A UNC-13 homolog A, MUNC1 99.6 5.9E-15 2E-19 140.4 11.0 85 41-157 14-99 (167)
47 1djx_A PLC-D1, phosphoinositid 99.6 1.6E-14 5.5E-19 164.0 14.4 121 40-188 496-623 (624)
48 3nsj_A Perforin-1; pore formin 99.5 2.3E-14 7.9E-19 159.6 14.4 111 41-192 394-507 (540)
49 3bxj_A RAS GTPase-activating p 99.5 1.2E-15 4.2E-20 168.6 1.9 122 41-193 11-161 (483)
50 2r83_A Synaptotagmin-1; C2A-C2 99.5 8E-14 2.7E-18 143.0 12.8 106 35-168 144-257 (284)
51 1cjy_A CPLA2, protein (cytosol 99.5 4.3E-14 1.5E-18 162.2 8.7 103 40-168 17-125 (749)
52 1dqv_A Synaptotagmin III; beta 99.4 4.7E-14 1.6E-18 146.1 4.8 109 39-174 150-266 (296)
53 3qr0_A Phospholipase C-beta (P 99.3 1.5E-11 5.1E-16 142.5 12.7 110 41-188 650-770 (816)
54 3pfq_A PKC-B, PKC-beta, protei 99.3 8.2E-12 2.8E-16 143.5 10.4 105 38-170 169-281 (674)
55 2zkm_X 1-phosphatidylinositol- 99.3 1.6E-11 5.4E-16 142.8 12.1 112 40-188 677-798 (799)
56 3ohm_B 1-phosphatidylinositol- 99.2 1.5E-11 5.2E-16 143.2 11.1 112 41-189 725-845 (885)
57 2enj_A NPKC-theta, protein kin 99.1 8.6E-10 2.9E-14 99.2 11.7 111 41-188 10-129 (138)
58 1yrk_A NPKC-delta, protein kin 99.1 2.3E-09 7.9E-14 95.2 13.9 90 87-188 26-124 (126)
59 3hsi_A Phosphatidylserine synt 99.1 4.4E-10 1.5E-14 123.1 11.1 147 250-463 258-420 (458)
60 1v0w_A Phospholipase D; hydrol 98.8 2.1E-08 7.2E-13 111.3 13.9 159 250-462 314-491 (506)
61 1xdp_A Polyphosphate kinase; P 97.8 0.0001 3.4E-09 84.2 11.9 132 252-465 514-650 (687)
62 2o8r_A Polyphosphate kinase; s 97.7 0.00017 6E-09 81.9 12.4 137 243-465 512-656 (705)
63 3qph_A TRMB, A global transcri 95.6 0.012 4E-07 61.8 5.8 46 251-307 120-165 (342)
64 2f5t_X Archaeal transcriptiona 94.6 0.041 1.4E-06 54.4 5.9 49 250-309 10-58 (233)
65 1byr_A Protein (endonuclease); 92.6 0.04 1.4E-06 50.1 1.7 48 543-590 13-64 (155)
66 4ggj_A Mitochondrial cardiolip 86.9 0.17 5.7E-06 48.4 1.0 42 544-586 46-92 (196)
67 2wxf_A Phosphatidylinositol-4, 86.0 3.4 0.00012 48.7 11.4 85 40-153 216-322 (940)
68 4gel_A Mitochondrial cardiolip 84.0 0.34 1.2E-05 46.7 1.6 45 543-588 57-106 (220)
69 3l4c_A Dedicator of cytokinesi 82.8 3.2 0.00011 40.3 7.8 38 102-139 79-119 (220)
70 3hhm_A Phosphatidylinositol-4, 79.1 4.9 0.00017 47.8 9.2 87 40-154 354-454 (1091)
71 2yrb_A Protein fantom; beta sa 75.8 8.2 0.00028 35.4 7.8 100 88-189 40-150 (156)
72 1e7u_A Phosphatidylinositol 3- 68.4 19 0.00066 42.4 10.6 67 88-154 238-329 (961)
73 2y3a_A Phosphatidylinositol-4, 63.0 5.6 0.00019 47.5 4.8 69 40-137 352-429 (1092)
74 2c1l_A Restriction endonucleas 43.2 58 0.002 32.1 7.4 79 286-397 50-128 (358)
No 1
>1v0w_A Phospholipase D; hydrolase, substrate SOAK, dibutyrylphosphatidylcholine, DIC4PC; 1.35A {Streptomyces SP} SCOP: d.136.1.2 d.136.1.2 PDB: 1v0s_A 1v0r_A 1v0t_A 1v0v_A 1v0u_A 1v0y_A* 1f0i_A 2ze4_A* 2ze9_A*
Probab=99.94 E-value=7e-27 Score=260.42 Aligned_cols=155 Identities=19% Similarity=0.189 Sum_probs=110.9
Q ss_pred HHHHHHHHHHhcccEEEEEEEeecceeeE-EeCCCCchhHHHHHHhhhcCC--CeEEEEEeCCCcccccccccccCccCC
Q 007000 251 CWQDVYDAINQARRLIYITGWSVYHTVRL-VRDGSNTLMLGDLLKIKSQEG--VRVLILAWDDPTSRSILGYKTDGIMST 327 (622)
Q Consensus 251 ~f~~l~~aI~~Ar~~I~I~~y~~~p~~~i-~~~~~~g~~l~~~L~~aa~rG--V~VriLv~D~~gs~~~~~~~~~~~~~~ 327 (622)
+|++|+++|++||++|+|++| + +.++..+..|.++|++||+|| |+||||+ |..|+.....
T Consensus 67 ~~~~l~~~I~~Ak~~I~i~~y-------~~~~~d~~g~~i~~aL~~aa~rGp~V~Vril~-D~~g~~~~~~--------- 129 (506)
T 1v0w_A 67 LLAKMTENIGNATRTVDISTL-------APFPNGAFQDAIVAGLKESAAKGNKLKVRILV-GAAPVYHMNV--------- 129 (506)
T ss_dssp HHHHHHHHHHTCSSEEEEEEE-------SSCCCHHHHHHHHHHHHHHHHTTCCEEEEEEE-ECCC--CCCC---------
T ss_pred HHHHHHHHHHHhccEEEEEEe-------eccCCChHHHHHHHHHHHHHhCCCCcEEEEEE-eCcccccccc---------
Confidence 899999999999999999999 5 367777899999999999999 9999996 8765432110
Q ss_pred ChHHHHhhhcCCCeEEEecCCCCCCCcccccccccccccccccceEEEccCCccCcceeEEEEcccccCCcccCCCCCCC
Q 007000 328 NDEETRRFFKHSSVQVLLCPRSAGKGHSFVKKQEVGTIYTHHQKTVVVDADAGQFKRKIIAFVGGLDLCKGRYDTPAHPL 407 (622)
Q Consensus 328 ~~~~~~~~l~~~gv~v~~~~~~~~~~~~~~~~~~~~~~~r~HrK~vVIDg~~~~~~~~~vafvGG~Ni~~~~~d~~~H~~ 407 (622)
....+.+.|+++|+++....+.. ...|.. ....+.|||||++|||+ ++||+||+|+++++|...
T Consensus 130 ~~~~~~~~L~~~g~~~~~~~~~~--~~~~~~--~~~~~~r~H~K~~ViD~--------~~a~~Gg~Nl~~d~y~~~---- 193 (506)
T 1v0w_A 130 IPSKYRDELTAKLGKAAENITLN--VASMTT--SKTAFSWNHSKILVVDG--------QSALTGGINSWKDDYLDT---- 193 (506)
T ss_dssp HHHHHHHHHHHHHGGGGGGEEEE--EEEECS--BTTTTBCBCCCEEEETT--------TEEEEESCCCCHHHHTSS----
T ss_pred CCHHHHHHHHhcccceeecCccc--cccccc--cCCccccceeeEEEECC--------cEEEeeccccCccccccC----
Confidence 01234555655444321100000 000100 00123489999999999 899999999965544321
Q ss_pred ccccccccCCCCCCCCCCCCCCCCCCCCceeeeeEEeChHHHHHHHHHHHHHhhcc
Q 007000 408 FKTLETVHKDDYYNPSLLEPIAGGPREPWHDLHCRIDGPAAYDILTNFEERWLKAS 463 (622)
Q Consensus 408 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~D~~~ri~Gpav~dl~~~F~~~W~~~~ 463 (622)
..+|||++++++||+|.+++..|.++|+...
T Consensus 194 -------------------------~~~~~D~~v~i~G~~v~~l~~~F~~~W~~~~ 224 (506)
T 1v0w_A 194 -------------------------THPVSDVDLALTGPAAGSAGRYLDTLWTWTC 224 (506)
T ss_dssp -------------------------SSCCBEEEEEEESHHHHHHHHHHHHHHHHHH
T ss_pred -------------------------CCCceEEEEEEECHHHHHHHHHHHHHHhhhc
Confidence 1479999999999999999999999999654
No 2
>3hsi_A Phosphatidylserine synthase; CDP- diacylglycerol--serine O-phosphatidyltransferase, structura genomics, PSI-2; HET: MSE; 2.20A {Haemophilus influenzae}
Probab=99.92 E-value=7.1e-26 Score=248.34 Aligned_cols=261 Identities=10% Similarity=0.003 Sum_probs=169.3
Q ss_pred CcCCCeEEEeecCcCCCCccceeEecCCccccchhHHHHHHHHHHhcccEEEEEEEeecceeeEEeCCCCchhHHHHHHh
Q 007000 216 LRRGGKVTLYQDAHAHDGCLADLKLDGGVQFNHESCWQDVYDAINQARRLIYITGWSVYHTVRLVRDGSNTLMLGDLLKI 295 (622)
Q Consensus 216 ~~~g~~v~l~~~g~~~~~~~~~~~~~~~~~~~~~~~f~~l~~aI~~Ar~~I~I~~y~~~p~~~i~~~~~~g~~l~~~L~~ 295 (622)
++.||+++++.+|++ +|++++++|++|+++|+|++| ++.+|+.|..|.++|.+
T Consensus 23 ~~~~n~v~~l~~g~~--------------------~~~~l~~~I~~A~~~I~i~~~-------~~~~d~~g~~l~~aL~~ 75 (458)
T 3hsi_A 23 ALQAEQIEFLGSSAE--------------------FKTQIIELIRNAKKRIYVTAL-------YWQKDEAGQEILDEIYR 75 (458)
T ss_dssp ECCGGGEEECCCHHH--------------------HHHHHHHHHHTCSSEEEEEES-------CBCSSHHHHHHHHHHHH
T ss_pred cccCCeEEEEeCHHH--------------------HHHHHHHHHHhcCCEEEEEEE-------EEecCcHHHHHHHHHHH
Confidence 456899999999987 999999999999999999999 77888899999999999
Q ss_pred hhcC--CCeEEEEEeCCC-------cccccccccccCccCCChHHHHhhhcCCC--eEEE--ecC-CCCCCCcccccccc
Q 007000 296 KSQE--GVRVLILAWDDP-------TSRSILGYKTDGIMSTNDEETRRFFKHSS--VQVL--LCP-RSAGKGHSFVKKQE 361 (622)
Q Consensus 296 aa~r--GV~VriLv~D~~-------gs~~~~~~~~~~~~~~~~~~~~~~l~~~g--v~v~--~~~-~~~~~~~~~~~~~~ 361 (622)
||+| ||+||||+ |+. |+.... ....+...|.++| |+|. .++ +. +.
T Consensus 76 aa~r~~GV~Vril~-D~~~~~r~~~g~~~~~----------~~~~~~~~L~~~g~nv~v~~~~f~~p~----------~~ 134 (458)
T 3hsi_A 76 VKQENPHLDVKVLI-DWHRAQRNLLGAEKSA----------TNADWYCEQRQTYQLPDDPNMFFGVPI----------NT 134 (458)
T ss_dssp HHHHSTTCEEEEEE-ETTGGGSCCC-----C----------CHHHHHHHHHHHHTCTTCCCCEEEECS----------SS
T ss_pred HHhcCCCCEEEEEE-ECcccccccccccccc----------ccHHHHHHHHhhCCCceEeeeecCCcc----------cc
Confidence 9999 99999996 883 332111 1124455555545 7776 553 22 11
Q ss_pred cccccccccceEEEccCCccCcceeEEEEcccccCCcccCCCCCCCccccccccCCCCCCCCCCCCCCCCCCCCceeeee
Q 007000 362 VGTIYTHHQKTVVVDADAGQFKRKIIAFVGGLDLCKGRYDTPAHPLFKTLETVHKDDYYNPSLLEPIAGGPREPWHDLHC 441 (622)
Q Consensus 362 ~~~~~r~HrK~vVIDg~~~~~~~~~vafvGG~Ni~~~~~d~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~D~~~ 441 (622)
...+.|+|+|++|||| ++ ++||+||+++|+... .+...|+|+.
T Consensus 135 ~~~~~r~H~Ki~viD~--------~v-~~~G~Ni~d~y~~~~---------------------------~~~~~drd~~- 177 (458)
T 3hsi_A 135 REVFGVLHVKGFVFDD--------TV-LYSGASINNVYLHQF---------------------------EKYRYDRYQK- 177 (458)
T ss_dssp SGGGCCEECCEEEETT--------EE-EEESCCBSTTTTTCS---------------------------SCCEECCEEE-
T ss_pred ccccCcceeeEEEECC--------CE-EEEeeecCHHHhcCC---------------------------cccCcchhhh-
Confidence 2356899999999999 88 556699999988531 1234588844
Q ss_pred EEeChHHHHHHHHHHH--HHhhccCCCCcccccCCCccchhh-c----ccCcccccCccccCCCCCCCCcccceEeeecc
Q 007000 442 RIDGPAAYDILTNFEE--RWLKASKPHGLQKLKSSNDDSLLK-L----ERIPEIVGMTEASYLSENDPEAWHAQVFRSID 514 (622)
Q Consensus 442 ri~Gpav~dl~~~F~~--~W~~~~~~~~~~~~~~~~~~~~~~-~----~~~p~~~~~~~~~~~~~~~~~~~~vqv~rs~~ 514 (622)
+.||.+.|....|.+ .|+...-.. +...-......+.. . +.++... ... . +....+...+++.+...
T Consensus 178 -i~g~~~~D~~~~~~~~~~~~g~~v~~-l~~~~~~~~~~~~~~~~~~~~~l~~~~--~~~-~-~~~~~~~~~~~v~p~~~ 251 (458)
T 3hsi_A 178 -ITHAELADSMVNFINDYLLDFSAVYP-LDVTNRPRTKEIRGNIRAYRKDLAQNG--EYS-L-KSAVKLPNVLSVSPLFG 251 (458)
T ss_dssp -EECHHHHHHHHHHHHHTTCCTTTCEE-SSSSCCCCGGGTHHHHHHHHHHHHHHC--CCC-C-SSCBSSCSSCEEEEEEE
T ss_pred -hcCchHHHHHHHHHHhhhhcCccchh-hHHHhcccchhhHHHHHHHHHhhhhcc--ccc-c-cccCCCCceEEEecCCC
Confidence 899999999999944 465322110 00000000000000 0 0000000 000 0 00001112344443110
Q ss_pred ccccCCCCCCCcccccccccccccccchhHHHHHHHHHHHHccceEEEEeccccccccCcccc-----cCcCCcccCchh
Q 007000 515 SNSVKGFPVEPRDATSMNLVCGKNVLIDMSIHTAYVKAIRAAQHFIYIENQYFLGSSFNWDSH-----RDLGESICDNEQ 589 (622)
Q Consensus 515 ~~~~~~~~~~P~~~~~~~~~~~~~~~~e~~I~~ay~~aI~~A~~~IyIenqYFip~~~~~~~~-----~~~~~~~~~~~~ 589 (622)
|.. .+..|+.+|+.+|.+|+++|||+||||+|++.+.++| +++.|++++|..
T Consensus 252 ----------~~~-------------~~~~i~~~~~~lI~~A~~~I~I~tpYf~p~~~~~~aL~~Aa~rGV~VrIi~~~~ 308 (458)
T 3hsi_A 252 ----------LGA-------------SGNELNQVIEDLFLQVQKKLVICTPYFNFPRTLQHKIATLLENGKRVEIIVGDK 308 (458)
T ss_dssp ----------ESS-------------SSCHHHHHHHHHHHTCSSEEEEECSSSCCCHHHHHHHHHHHTTTCEEEEEEECG
T ss_pred ----------CCC-------------chhHHHHHHHHHHHhcccEEEEEEeccCCCHHHHHHHHHHHHCCCeEEEEECCc
Confidence 110 1357999999999999999999999999998777754 778899999997
Q ss_pred h
Q 007000 590 M 590 (622)
Q Consensus 590 ~ 590 (622)
.
T Consensus 309 ~ 309 (458)
T 3hsi_A 309 V 309 (458)
T ss_dssp G
T ss_pred c
Confidence 4
No 3
>2fk9_A Protein kinase C, ETA type; ATP-binding, metal-binding, nucleotide-binding, diacylglycerol binding, serine/threonine-protein kinase, transferase; 1.75A {Homo sapiens}
Probab=99.87 E-value=4.5e-22 Score=187.57 Aligned_cols=134 Identities=19% Similarity=0.283 Sum_probs=105.9
Q ss_pred ccCcceeEeeceEEEEEEEEeecCCCCCccccccccccccccccccccccccCCCCCCCCcEEEEEECCEEEeeeeeecC
Q 007000 30 HQGSLKVLLLHGNLDIWVKEAKNLPNMDMFHKKIGDVFGKLNVKVTSKIESHLSDKITSDPYVTVSICGAVIGRTFVISN 109 (622)
Q Consensus 30 ~~~~~~~~~~~g~L~v~V~~A~~L~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~DPYv~V~l~~~~~~kT~vi~~ 109 (622)
+.++-.+....|.|+|+|++|++|+++|...+.+ .|+ ...|++||||+|.+++++++||+++++
T Consensus 18 ~~~~~~~~~~~g~L~V~VieA~~L~~~D~~~~~~--~f~--------------~~~g~sDPYv~v~l~~~~~~kT~v~~k 81 (157)
T 2fk9_A 18 GSMSSGTMKFNGYLRVRIGEAVGLQPTRWSLRHS--LFK--------------KGHQLLDPYLTVSVDQVRVGQTSTKQK 81 (157)
T ss_dssp ------CCCEEEEEEEEEEEEECCCCCHHHHHTT--TSS--------------SSCCCCCEEEEEEETTEEEEECCCCSS
T ss_pred CCCcchhccCccEEEEEEEEEECCCCcccccccc--ccc--------------cCCCCCCeEEEEEECCEeeEEeeecCC
Confidence 4455567788899999999999999988532110 111 014679999999999988789999999
Q ss_pred CCCCeeeeEEEEecCCCCcEEEEEEEecCCcC-CeeeEeEEEeceeecCC----CeeeecccccCCCCCccccCceEEEE
Q 007000 110 SESPVWMQHFNVPVAHSAAEVHFVVKDNDFVG-SQIMGAVGIPVEKLCSG----DKIEGAFPILNSSRKPCKAGAVLSLS 184 (622)
Q Consensus 110 t~nPvWNE~f~~~v~~~~~~L~l~V~D~d~~~-dd~IG~~~i~L~~l~~g----~~~~~W~~L~~~~g~~~k~~G~I~L~ 184 (622)
|+||+|||+|.|.+.. .+.|.|+|||+|.++ +++||++.|+|++|..+ ...+.|++|.. .|+|+|.
T Consensus 82 tlnP~WNE~F~f~v~~-~~~L~~~V~D~d~~~~dd~iG~~~i~l~~l~~~~~~~~~~~~W~~L~~--------~G~i~l~ 152 (157)
T 2fk9_A 82 TNKPTYNEEFCANVTD-GGHLELAVFHETPLGYDHFVANCTLQFQELLRTTGASDTFEGWVDLEP--------EGKVFVV 152 (157)
T ss_dssp CSSCEEEEEEEEEEEE-ECEEEEEEEECCSSSSCEEEEEEEEEHHHHHHHHTTCSEEEEEEECBS--------SCEEEEE
T ss_pred CCCCccCcEEEEEcCC-CCEEEEEEEECCCCCCCCEEEEEEEEHHHhhcccCCCCcccEEEECCC--------CcEEEEE
Confidence 9999999999999864 468999999999888 89999999999998854 67899999942 3689999
Q ss_pred EEee
Q 007000 185 IQYT 188 (622)
Q Consensus 185 l~f~ 188 (622)
++|.
T Consensus 153 l~~~ 156 (157)
T 2fk9_A 153 ITLT 156 (157)
T ss_dssp EEEC
T ss_pred EEEE
Confidence 8874
No 4
>2ep6_A MCTP2 protein; beta sandwich, Ca2+ binding, membrane binding, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.7.1.1
Probab=99.85 E-value=9.6e-21 Score=172.97 Aligned_cols=127 Identities=21% Similarity=0.330 Sum_probs=108.5
Q ss_pred CcceeEeeceEEEEEEEEeecCCCCCccccccccccccccccccccccccCCCCCCCCcEEEEEECCEEEeeeeeecCCC
Q 007000 32 GSLKVLLLHGNLDIWVKEAKNLPNMDMFHKKIGDVFGKLNVKVTSKIESHLSDKITSDPYVTVSICGAVIGRTFVISNSE 111 (622)
Q Consensus 32 ~~~~~~~~~g~L~v~V~~A~~L~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~DPYv~V~l~~~~~~kT~vi~~t~ 111 (622)
.|+..+...|.|+|+|++|++|+.+|. .|++||||+|++++++. ||+++++++
T Consensus 4 ~s~~~~~~~~~L~v~v~~a~~L~~~d~--------------------------~g~~dpyv~v~~~~~~~-kT~~~~~t~ 56 (133)
T 2ep6_A 4 GSSGDVKDVGILQVKVLKAADLLAADF--------------------------SGKSDPFCLLELGNDRL-QTHTVYKNL 56 (133)
T ss_dssp CCCCSCCCSEEEEEEEEEEESCCCSSS--------------------------SSCCCEEEEEEETTEEE-ECCCCSSCS
T ss_pred ccccccCCceEEEEEEEeeECCCCCCC--------------------------CCCcCeEEEEEECCEEE-EeeeecCCC
Confidence 344555566999999999999998875 46799999999999877 999999999
Q ss_pred CCeeeeEEEEecCCCCcEEEEEEEecCCcC-CeeeEeEEEeceeecCCCeeeecccccCCCCCccccCceEEEEEEee
Q 007000 112 SPVWMQHFNVPVAHSAAEVHFVVKDNDFVG-SQIMGAVGIPVEKLCSGDKIEGAFPILNSSRKPCKAGAVLSLSIQYT 188 (622)
Q Consensus 112 nPvWNE~f~~~v~~~~~~L~l~V~D~d~~~-dd~IG~~~i~L~~l~~g~~~~~W~~L~~~~g~~~k~~G~I~L~l~f~ 188 (622)
||+|||+|.|++.+..+.|.|+|||++..+ +++||++.++|+++..+. ..|++|....++. +..|+|+|.++|.
T Consensus 57 nP~wne~f~f~~~~~~~~l~i~V~d~d~~~~~~~lG~~~i~l~~l~~~~--~~w~~L~~~~~~~-~~~G~i~l~i~~~ 131 (133)
T 2ep6_A 57 NPEWNKVFTFPIKDIHDVLEVTVFDEDGDKPPDFLGKVAIPLLSIRDGQ--PNCYVLKNKDLEQ-AFKGVIYLEMDLI 131 (133)
T ss_dssp SCCCCEEEEEEESCTTCEEEEEEEEEETTEEEEECCBCEEEGGGCCSSC--CEECCCBCSCTTS-CCSSEEEEEEEEE
T ss_pred CCccccEEEEEecCCCCEEEEEEEECCCCCCCCeeEEEEEEHHHccCCC--ceEEEeecCCCCC-ccceEEEEEEEEE
Confidence 999999999999877789999999999886 899999999999997654 5899998655432 3568999999885
No 5
>3b7y_A E3 ubiquitin-protein ligase NEDD4; C2 domain, UBL-conjugation pathway, structural genomics consortium, SGC, cytoplasm; 1.80A {Homo sapiens} PDB: 2nsq_A
Probab=99.82 E-value=8.9e-20 Score=170.43 Aligned_cols=122 Identities=24% Similarity=0.335 Sum_probs=98.6
Q ss_pred eEEEEEEEEeecCCCCCccccccccccccccccccccccccCCCCCCCCcEEEEEECC-----EEEeeeeeecCCCCCee
Q 007000 41 GNLDIWVKEAKNLPNMDMFHKKIGDVFGKLNVKVTSKIESHLSDKITSDPYVTVSICG-----AVIGRTFVISNSESPVW 115 (622)
Q Consensus 41 g~L~v~V~~A~~L~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~DPYv~V~l~~-----~~~~kT~vi~~t~nPvW 115 (622)
+.|+|+|++|++|+.+|. .|++||||+|++.. ....||+++++++||+|
T Consensus 20 ~~L~V~v~~a~~L~~~d~--------------------------~g~~dpyv~v~~~~~~~~~~~~~kT~v~~~t~nP~w 73 (153)
T 3b7y_A 20 RIVRVRVIAGIGLAKKDI--------------------------LGASDPYVRVTLYDPMNGVLTSVQTKTIKKSLNPKW 73 (153)
T ss_dssp EEEEEEEEEEESCC---------------------------------CCEEEEEEEEETTTEEEEEEECCCCSSCSSCCC
T ss_pred cEEEEEEEEeeCCCCCCC--------------------------CCCCCcEEEEEEECCCCccceeeeCccccCCCCCCC
Confidence 889999999999998775 45689999999963 24459999999999999
Q ss_pred eeEEEEecCCCCcEEEEEEEecCCcC-CeeeEeEEEeceeecCCCee------eecccccCCCCCccccCceEEEEEEee
Q 007000 116 MQHFNVPVAHSAAEVHFVVKDNDFVG-SQIMGAVGIPVEKLCSGDKI------EGAFPILNSSRKPCKAGAVLSLSIQYT 188 (622)
Q Consensus 116 NE~f~~~v~~~~~~L~l~V~D~d~~~-dd~IG~~~i~L~~l~~g~~~------~~W~~L~~~~g~~~k~~G~I~L~l~f~ 188 (622)
||+|.|.+......|.|+|||++..+ +++||++.|+|+++..+... ..|++|....++. +..|+|+|+++|.
T Consensus 74 ne~f~f~v~~~~~~l~~~V~d~d~~~~d~~iG~~~i~l~~l~~~~~~~~~~~~~~w~~L~~~~~~~-~~~G~i~l~l~~~ 152 (153)
T 3b7y_A 74 NEEILFRVHPQQHRLLFEVFDENRLTRDDFLGQVDVPLYPLPTENPRLERPYTFKDFVLHPRSHKS-RVKGYLRLKMTYL 152 (153)
T ss_dssp CEEEEEEECTTTCEEEEEEEECCSSSCCEEEEEEEEECCSCCBCCTTSCCCCCCEEEECBCSSTTC-CCCSEEEEEEEEC
T ss_pred CCEEEEEecCCCCEEEEEEEECCCCcCCCeeEEEEEEHHHcccCCCcccccccccccccccccCCC-CcceEEEEEEEEe
Confidence 99999999877789999999999887 89999999999999865432 5899997544322 3568999999998
Q ss_pred c
Q 007000 189 P 189 (622)
Q Consensus 189 p 189 (622)
|
T Consensus 153 P 153 (153)
T 3b7y_A 153 P 153 (153)
T ss_dssp C
T ss_pred C
Confidence 6
No 6
>1wfj_A Putative elicitor-responsive gene; C2 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, plant protein; NMR {Arabidopsis thaliana} SCOP: b.7.1.2
Probab=99.82 E-value=1.9e-20 Score=171.33 Aligned_cols=122 Identities=21% Similarity=0.384 Sum_probs=106.1
Q ss_pred eceEEEEEEEEeecCCCCCccccccccccccccccccccccccCCCCCCCCcEEEEEECCEEEeeeeeec-CCCCCeeee
Q 007000 39 LHGNLDIWVKEAKNLPNMDMFHKKIGDVFGKLNVKVTSKIESHLSDKITSDPYVTVSICGAVIGRTFVIS-NSESPVWMQ 117 (622)
Q Consensus 39 ~~g~L~v~V~~A~~L~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~DPYv~V~l~~~~~~kT~vi~-~t~nPvWNE 117 (622)
..|.|+|+|++|++|+.+|. .+.+||||+|++++++. ||++++ ++.||+|||
T Consensus 8 ~~~~L~v~v~~a~~L~~~d~--------------------------~g~~dpyv~v~~~~~~~-kT~~~~~~~~nP~Wne 60 (136)
T 1wfj_A 8 PHGTLEVVLVSAKGLEDADF--------------------------LNNMDPYVQLTCRTQDQ-KSNVAEGMGTTPEWNE 60 (136)
T ss_dssp CEEEEEEEEEEEEECSSCCS--------------------------SCSSCCCEEEESSSCEE-ECCCCTTCCSSCEEEE
T ss_pred CcEEEEEEEEeccCCCCccc--------------------------CCCcCceEEEEECCccc-eeEeccCCCCCCccCc
Confidence 34999999999999998875 45689999999998877 999998 899999999
Q ss_pred EEEEecCCCCcEEEEEEEecCCcC-CeeeEeEEEeceeec-CCCeeeecccccCCCCCccccCceEEEEEEeeccc
Q 007000 118 HFNVPVAHSAAEVHFVVKDNDFVG-SQIMGAVGIPVEKLC-SGDKIEGAFPILNSSRKPCKAGAVLSLSIQYTPVE 191 (622)
Q Consensus 118 ~f~~~v~~~~~~L~l~V~D~d~~~-dd~IG~~~i~L~~l~-~g~~~~~W~~L~~~~g~~~k~~G~I~L~l~f~p~~ 191 (622)
+|.|++......|.|+|||++.++ +++||++.|+|+++. .+...+.|++|. ..+ +..|+|+|.++|.|..
T Consensus 61 ~f~f~v~~~~~~l~~~V~d~~~~~~d~~lG~~~i~l~~l~~~~~~~~~w~~L~-~~~---~~~G~i~l~l~~~p~~ 132 (136)
T 1wfj_A 61 TFIFTVSEGTTELKAKIFDKDVGTEDDAVGEATIPLEPVFVEGSIPPTAYNVV-KDE---EYKGEIWVALSFKPSG 132 (136)
T ss_dssp EEEEEEESSCCEEEEEECCSSSCTTTCCSEEEEEESHHHHHHSEEEEEEEEEE-ETT---EEEEEEEEEEEEEECC
T ss_pred EEEEEECCCCCEEEEEEEECCCCCCCceEEEEEEEHHHhccCCCCCcEEEEee-cCC---ccCEEEEEEEEEEeCC
Confidence 999999876689999999999887 899999999999994 566678999997 333 3568999999999854
No 7
>1gmi_A Protein kinase C, epsilon type; PKC, C2 domain, X-RAY, phospholipids, PKC epsilon.; 1.7A {Rattus rattus} SCOP: b.7.1.1
Probab=99.82 E-value=4.2e-20 Score=169.52 Aligned_cols=128 Identities=19% Similarity=0.312 Sum_probs=103.8
Q ss_pred eeceEEEEEEEEeecCCCCCccccccccccccccccccccccccCCCCCCCCcEEEEEECCEEEeeeeeecCCCCCeeee
Q 007000 38 LLHGNLDIWVKEAKNLPNMDMFHKKIGDVFGKLNVKVTSKIESHLSDKITSDPYVTVSICGAVIGRTFVISNSESPVWMQ 117 (622)
Q Consensus 38 ~~~g~L~v~V~~A~~L~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~DPYv~V~l~~~~~~kT~vi~~t~nPvWNE 117 (622)
...|.|+|+|++|++|+++|...+.+ + +...+.+.+||||+|.++++..++|+++++++||+|||
T Consensus 3 ~~~g~L~v~v~~a~~L~~~d~~~~~~---~------------g~~~~~~~~DPyv~v~l~~~~~~~T~~~~~t~nP~WnE 67 (136)
T 1gmi_A 3 VFNGLLKIKICEAVSLKPTAWSLRDA---V------------GPRPQTFLLDPYIALNVDDSRIGQTATKQKTNSPAWHD 67 (136)
T ss_dssp CEEEEEEEEEEEEESCCCCHHHHCC----C------------CSSCCCCCCCEEEEEEETTEEEEECCCCSSCSSCEEEE
T ss_pred ccceEEEEEEEeCcCCCCcccccccc---c------------ccccCCcCcCcEEEEEECCeEeeeeeEECCCcCCccCC
Confidence 46799999999999999888532210 0 00112356899999999998878999999999999999
Q ss_pred EEEEecCCCCcEEEEEEEecCCcC-CeeeEeEEEeceeecCC--CeeeecccccCCCCCccccCceEEEEEEeec
Q 007000 118 HFNVPVAHSAAEVHFVVKDNDFVG-SQIMGAVGIPVEKLCSG--DKIEGAFPILNSSRKPCKAGAVLSLSIQYTP 189 (622)
Q Consensus 118 ~f~~~v~~~~~~L~l~V~D~d~~~-dd~IG~~~i~L~~l~~g--~~~~~W~~L~~~~g~~~k~~G~I~L~l~f~p 189 (622)
+|.|.+... +.|.|+|||+|..+ +++||++.++|+++..+ ...+.|++|.. .|+|+|.++|.+
T Consensus 68 ~f~f~v~~~-~~L~~~V~d~d~~~~dd~iG~~~i~l~~l~~~~~~~~~~w~~L~~--------~G~i~l~l~~~~ 133 (136)
T 1gmi_A 68 EFVTDVCNG-RKIELAVFHDAPIGYDDFVANCTIQFEELLQNGSRHFEDWIDLEP--------EGKVYVIIDLSG 133 (136)
T ss_dssp EEEEEEEEE-CEEEEEEEECCSSSSCEEEEEEEEEHHHHTSTTCSEEEEEEECBS--------SCEEEEEEEEEE
T ss_pred EEEEEecCC-CEEEEEEEeCCCCCCCCEEEEEEEEHHHhcccCCCCccEEEEcCC--------CeEEEEEEEEEe
Confidence 999998654 78999999999887 89999999999999864 34589999842 378999999976
No 8
>3kwu_A MUNC13-1; calcium binding protein, phospholipid binding protein, metal binding protein; HET: GOL; 1.37A {Rattus norvegicus} SCOP: b.7.1.0 PDB: 3kwt_A*
Probab=99.82 E-value=2.8e-19 Score=166.08 Aligned_cols=119 Identities=25% Similarity=0.350 Sum_probs=102.6
Q ss_pred ceEEEEEEEEeecCCCCCccccccccccccccccccccccccCCCCCCCCcEEEEEECCEEEeeeeeecCCCCCeeeeEE
Q 007000 40 HGNLDIWVKEAKNLPNMDMFHKKIGDVFGKLNVKVTSKIESHLSDKITSDPYVTVSICGAVIGRTFVISNSESPVWMQHF 119 (622)
Q Consensus 40 ~g~L~v~V~~A~~L~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~DPYv~V~l~~~~~~kT~vi~~t~nPvWNE~f 119 (622)
.|.|+|+|++|++|+.+|. .|.+||||+|.+++++. ||+++++++||+|||+|
T Consensus 16 ~~~L~V~v~~a~~L~~~d~--------------------------~g~~dpyv~v~~~~~~~-kT~~~~~t~nP~Wne~f 68 (148)
T 3kwu_A 16 SAKISITVVCAQGLQAKDK--------------------------TGSSDPYVTVQVGKTKK-RTKTIYGNLNPVWEENF 68 (148)
T ss_dssp CEEEEEEEEEEESCCCCST--------------------------TSCCCEEEEEEETTEEE-ECCCCCSCSSCEEEEEE
T ss_pred ccEEEEEEEeeeCCCCCCC--------------------------CCCcCeEEEEEECCEEE-ECCccCCCCCCCcccEE
Confidence 5999999999999998875 46799999999998877 99999999999999999
Q ss_pred EEecCCCCcEEEEEEEecCCc-----------C-CeeeEeEEEeceeecCCCeeeecccccCCCCCccccCceEEEEEEe
Q 007000 120 NVPVAHSAAEVHFVVKDNDFV-----------G-SQIMGAVGIPVEKLCSGDKIEGAFPILNSSRKPCKAGAVLSLSIQY 187 (622)
Q Consensus 120 ~~~v~~~~~~L~l~V~D~d~~-----------~-dd~IG~~~i~L~~l~~g~~~~~W~~L~~~~g~~~k~~G~I~L~l~f 187 (622)
.|.+....+.|.|+|||++.. + +++||++.++|+++ ....+.|++|....+.. +..|+|+|.+.|
T Consensus 69 ~f~v~~~~~~l~~~v~d~d~~~~~~~~~~~~~~~~~~lG~~~i~l~~l--~~~~~~w~~L~~~~~~~-~~~G~i~l~l~~ 145 (148)
T 3kwu_A 69 HFECHNSSDRIKVRVLDEDDDIKSRVKQRFKRESDDFLGQTIIEVRTL--SGEMDVWYNLDKRTDKS-AVSGAIRLHISV 145 (148)
T ss_dssp EEEECSTTCEEEEEEEECCCSHHHHHHTTTSSCSSEEEEEEEEEGGGC--CSEEEEEEECBCSSTTC-CCCCEEEEEEEE
T ss_pred EEEecCCCCEEEEEEEECCCCccccccccccCCCCccEEEEEEEHHHC--cCCCCEEEEcccCCCCC-CCceEEEEEEEE
Confidence 999977778999999999975 4 89999999999998 34568999997543332 355899999988
Q ss_pred e
Q 007000 188 T 188 (622)
Q Consensus 188 ~ 188 (622)
.
T Consensus 146 e 146 (148)
T 3kwu_A 146 E 146 (148)
T ss_dssp E
T ss_pred E
Confidence 5
No 9
>2dmh_A Myoferlin; beta-sandwich, FER-1-like protein 3, muscular dystrophy, cardiomyopathy, membrane fusion, dystrophin, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.82 E-value=1.1e-19 Score=167.12 Aligned_cols=122 Identities=24% Similarity=0.450 Sum_probs=105.0
Q ss_pred ceEEEEEEEEeecCCCCCccccccccccccccccccccccccCCCCCCCCcEEEEEECCEEEeeeeeecCCCCCeeeeEE
Q 007000 40 HGNLDIWVKEAKNLPNMDMFHKKIGDVFGKLNVKVTSKIESHLSDKITSDPYVTVSICGAVIGRTFVISNSESPVWMQHF 119 (622)
Q Consensus 40 ~g~L~v~V~~A~~L~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~DPYv~V~l~~~~~~kT~vi~~t~nPvWNE~f 119 (622)
.|.|+|+|++|++|+.+|. +.+||||+|++++++. ||+++++++||+|||+|
T Consensus 6 ~g~L~v~v~~a~~L~~~~~---------------------------g~~dpyv~v~~~~~~~-kT~v~~~t~nP~wne~f 57 (140)
T 2dmh_A 6 SGMLRVIVESASNIPKTKF---------------------------GKPDPIVSVIFKDEKK-KTKKVDNELNPVWNEIL 57 (140)
T ss_dssp CCEEEEEEEEEESCCCCSS---------------------------SCCCEEEEEECSSCEE-ECCCCCSCSSCEEEEEE
T ss_pred CcEEEEEEEEeeCCCCCCC---------------------------CCCCeEEEEEECCEeE-EeeeecCCCCCccCcEE
Confidence 4889999999999998763 4589999999998876 99999999999999999
Q ss_pred EEecCCC----CcEEEEEEEecCCcC-CeeeEeEEEeceeecCCCeeeeccc---ccCCCCCccccCceEEEEEEeeccc
Q 007000 120 NVPVAHS----AAEVHFVVKDNDFVG-SQIMGAVGIPVEKLCSGDKIEGAFP---ILNSSRKPCKAGAVLSLSIQYTPVE 191 (622)
Q Consensus 120 ~~~v~~~----~~~L~l~V~D~d~~~-dd~IG~~~i~L~~l~~g~~~~~W~~---L~~~~g~~~k~~G~I~L~l~f~p~~ 191 (622)
.|.+... ...|.|+|||++..+ +++||++.++|++|..+...+.|++ |.+..+. +..|+|+|.++|.|..
T Consensus 58 ~f~v~~~~~~~~~~l~i~V~d~d~~~~~~~lG~~~i~l~~l~~~~~~~~w~~l~~l~~~~~~--~~~G~l~l~~~~~p~~ 135 (140)
T 2dmh_A 58 EFDLRGIPLDFSSSLGIIVKDFETIGQNKLIGTATVALKDLTGDQSRSLPYKLISLLNEKGQ--DTGATIDLVIGYDPPS 135 (140)
T ss_dssp EEECSSCCCCTTCEEEEEEEETTCSSSCCCCEEEEEEGGGTCSSSCEEEEEEEEEEECTTCC--EEEEEEEEEEEECCCB
T ss_pred EEEecccccCCCCEEEEEEEECCCCCCCceEEEEEEEHHHhccCCCceeEEeeeeccCCCCC--CCCCEEEEEEEEECCC
Confidence 9998642 478999999999887 7899999999999988888889988 6655554 2458999999999844
No 10
>1rlw_A Phospholipase A2, CALB domain; hydrolase, C2 domain; 2.40A {Homo sapiens} SCOP: b.7.1.1
Probab=99.80 E-value=2.5e-19 Score=161.67 Aligned_cols=121 Identities=21% Similarity=0.304 Sum_probs=98.8
Q ss_pred ceEEEEEEEEeecCCCCCccccccccccccccccccccccccCCCCCCCCcEEEEEECC--EEEeeeeeecCCCCCeeee
Q 007000 40 HGNLDIWVKEAKNLPNMDMFHKKIGDVFGKLNVKVTSKIESHLSDKITSDPYVTVSICG--AVIGRTFVISNSESPVWMQ 117 (622)
Q Consensus 40 ~g~L~v~V~~A~~L~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~DPYv~V~l~~--~~~~kT~vi~~t~nPvWNE 117 (622)
.|.|+|+|++|++|+.++... ..|++||||+|.+++ ....||+++++++||+|||
T Consensus 2 ~~~L~v~v~~a~~L~~~~~~d-----------------------~~g~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne 58 (126)
T 1rlw_A 2 SHKFTVVVLRATKVTKGAFGD-----------------------MLDTPDPYVELFISTTPDSRKRTRHFNNDINPVWNE 58 (126)
T ss_dssp CEEEEEEEEEEESCCSCHHHH-----------------------HHCCCCEEEEEECTTSTTCCEECCCCTTCSSCEEEE
T ss_pred CcEEEEEEEeeeCCCCCCccc-----------------------cCCCCCCEEEEEEccCCCceEEccccCCCCCCcccc
Confidence 488999999999999753100 035689999999985 2344999999999999999
Q ss_pred EEEEecCC-CCcEEEEEEEecCCcCCeeeEeEEEeceeecCCCeeeecccccCCCCCccccCceEEEEEEeec
Q 007000 118 HFNVPVAH-SAAEVHFVVKDNDFVGSQIMGAVGIPVEKLCSGDKIEGAFPILNSSRKPCKAGAVLSLSIQYTP 189 (622)
Q Consensus 118 ~f~~~v~~-~~~~L~l~V~D~d~~~dd~IG~~~i~L~~l~~g~~~~~W~~L~~~~g~~~k~~G~I~L~l~f~p 189 (622)
+|.|.+.. ....|.|+|||++..++++||++.++|++|..+...+.|++|.. .+.|.+++.++..|
T Consensus 59 ~f~f~v~~~~~~~l~i~V~d~d~~~~~~iG~~~i~l~~l~~~~~~~~~~~L~~------~~~g~i~~~le~~~ 125 (126)
T 1rlw_A 59 TFEFILDPNQENVLEITLMDANYVMDETLGTATFTVSSMKVGEKKEVPFIFNQ------VTEMVLEMSLEVAS 125 (126)
T ss_dssp EEEEEECTTSCCEEEEEEEECCSSCCEEEEEEEEEGGGSCTTCEEEEEEEETT------TEEEEEEEEEECCC
T ss_pred eEEEEecCCCCCEEEEEEEECCCCCCceeEEEEEEHHHccCCCcEEEEEEcCC------CceEEEEEEEEeCC
Confidence 99999854 44789999999998889999999999999998888999999953 13467777776544
No 11
>3m7f_B E3 ubiquitin-protein ligase NEDD4; C2 domain, GRB10, SH2 domain, phosphoprotein, conjugation pathway, signaling protein-ligase complex; 2.00A {Mus musculus}
Probab=99.79 E-value=7.6e-19 Score=168.34 Aligned_cols=124 Identities=24% Similarity=0.342 Sum_probs=97.1
Q ss_pred ceEEEEEEEEeecCCCCCccccccccccccccccccccccccCCCCCCCCcEEEEEECC-----EEEeeeeeecCCCCCe
Q 007000 40 HGNLDIWVKEAKNLPNMDMFHKKIGDVFGKLNVKVTSKIESHLSDKITSDPYVTVSICG-----AVIGRTFVISNSESPV 114 (622)
Q Consensus 40 ~g~L~v~V~~A~~L~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~DPYv~V~l~~-----~~~~kT~vi~~t~nPv 114 (622)
.|.|+|+|++|++|+.+|. .|++||||+|.+.+ ....||+++++++||+
T Consensus 7 ~g~L~V~v~~a~~L~~~d~--------------------------~g~~DPyv~v~l~~~~~~~~~~~kT~v~~~t~nP~ 60 (176)
T 3m7f_B 7 TRVVRVKVIAGIGLAKKDI--------------------------LGASDPYVRVTLYDPMSGILTSVQTKTIKKSLNPK 60 (176)
T ss_dssp CEEEEEEEEEEESCC---C--------------------------CCCCCEEEEEEEEETTTEEEEEEECCCCSSCSSCE
T ss_pred cEEEEEEEEEeeCCCCcCC--------------------------CCCcCcEEEEEEECCCCCcccceeCceECCCCCCc
Confidence 3889999999999998875 46699999999974 1344999999999999
Q ss_pred eeeEEEEecCCCCcEEEEEEEecCCcC-CeeeEeEEEeceeecCCCee-e-----ecccccCCCCCccccCceEEEEEEe
Q 007000 115 WMQHFNVPVAHSAAEVHFVVKDNDFVG-SQIMGAVGIPVEKLCSGDKI-E-----GAFPILNSSRKPCKAGAVLSLSIQY 187 (622)
Q Consensus 115 WNE~f~~~v~~~~~~L~l~V~D~d~~~-dd~IG~~~i~L~~l~~g~~~-~-----~W~~L~~~~g~~~k~~G~I~L~l~f 187 (622)
|||+|.|.+......|.|+|||++.++ +++||++.|+|.+|..+... + .||+|....++. +..|+|+|.+.|
T Consensus 61 Wne~f~f~v~~~~~~L~~~V~d~d~~~~d~~lG~~~i~l~~l~~~~~~~~~~~~~~w~~L~~~~~~~-~~~G~l~l~l~~ 139 (176)
T 3m7f_B 61 WNEEILFRVLPQRHRILFEVFDENRLTRDDFLGQVDVPLYPLPTENPRMERPYTFKDFVLHPRSHKS-RVKGYLRLKMTY 139 (176)
T ss_dssp EEEEEEEEECTTTCEEEEEEEECC----CEEEEEEEEESCSCCBC------CCCCEEEECBCSSTTC-CCCSEEEEEEEE
T ss_pred ccceEEEEEcCCCCEEEEEEEECCCCCCCcEEEEEEEEHHHccccCCcccccccccEEEccccCCCC-ccCEEEEEEEEE
Confidence 999999999876689999999999887 89999999999999865332 2 799997543332 356899999999
Q ss_pred ecc
Q 007000 188 TPV 190 (622)
Q Consensus 188 ~p~ 190 (622)
.|.
T Consensus 140 ~p~ 142 (176)
T 3m7f_B 140 LPK 142 (176)
T ss_dssp CC-
T ss_pred EeC
Confidence 986
No 12
>4ggj_A Mitochondrial cardiolipin hydrolase; piRNA pathway, protein-RNA interactions, piRNA RNAI, HKD MOT zinc finger, nuclease, nucleic acid binding; 1.75A {Mus musculus} PDB: 4ggk_A
Probab=99.78 E-value=3.4e-19 Score=174.13 Aligned_cols=132 Identities=17% Similarity=0.216 Sum_probs=101.7
Q ss_pred HHHHHHHHHHhcccEEEEEEEeecceeeEEeCCCCchhHHHHHHhhhcCCCeEEEEEeCCCcccccccccccCccCCChH
Q 007000 251 CWQDVYDAINQARRLIYITGWSVYHTVRLVRDGSNTLMLGDLLKIKSQEGVRVLILAWDDPTSRSILGYKTDGIMSTNDE 330 (622)
Q Consensus 251 ~f~~l~~aI~~Ar~~I~I~~y~~~p~~~i~~~~~~g~~l~~~L~~aa~rGV~VriLv~D~~gs~~~~~~~~~~~~~~~~~ 330 (622)
.|.+|+++|++|+++|+|++| ++.+ ..|.++|.+|++|||+||||+ |..... .. .
T Consensus 47 ~~~~ll~~I~~A~~sI~i~~y-------~~~~----~~i~~aL~~aa~rGV~Vrii~-D~~~~~-~~------------~ 101 (196)
T 4ggj_A 47 SLSRLLRALLAARSSLELCLF-------AFSS----PQLGRAVQLLHQRGVRVRVIT-DCDYMA-LN------------G 101 (196)
T ss_dssp HHHHHHHHHHTCSSEEEEEES-------CBCC----HHHHHHHHHHHHTTCEEEEEE-SSCCC----------------C
T ss_pred HHHHHHHHHHHhheEEEEEEE-------EeCC----HHHHHHHHHHHHcCCcEEEEE-eccccc-cc------------H
Confidence 899999999999999999999 4444 679999999999999999996 864321 10 1
Q ss_pred HHHhhhcCCCeEEEecCCCCCCCcccccccccccccccccceEEEccCCccCcceeEEEEcccccCCcccCCCCCCCccc
Q 007000 331 ETRRFFKHSSVQVLLCPRSAGKGHSFVKKQEVGTIYTHHQKTVVVDADAGQFKRKIIAFVGGLDLCKGRYDTPAHPLFKT 410 (622)
Q Consensus 331 ~~~~~l~~~gv~v~~~~~~~~~~~~~~~~~~~~~~~r~HrK~vVIDg~~~~~~~~~vafvGG~Ni~~~~~d~~~H~~~~~ 410 (622)
.....|..+||+|+.... ...+|+|++|||+ +++|+||+|++...+..
T Consensus 102 ~~~~~l~~~gi~v~~~~~----------------~~~~H~K~~viD~--------~~~~~GS~N~t~~~~~~-------- 149 (196)
T 4ggj_A 102 SQIGLLRKAGIQVRHDQD----------------LGYMHHKFAIVDK--------KVLITGSLNWTTQAIQN-------- 149 (196)
T ss_dssp CHHHHHHHTTCEEEECCS----------------SSCCCCEEEEETT--------TEEEEESCCBCHHHHHH--------
T ss_pred HHHHHHHhcCCCcccccc----------------cccccCcEEEEcc--------eEEEecCccCChhhhcc--------
Confidence 234567889999987432 1348999999999 89999999998765421
Q ss_pred cccccCCCCCCCCCCCCCCCCCCCCceeeeeEEe-ChHHHHHHHHHHHHHhhccC
Q 007000 411 LETVHKDDYYNPSLLEPIAGGPREPWHDLHCRID-GPAAYDILTNFEERWLKASK 464 (622)
Q Consensus 411 ~~~~~~~~~~~~~~~~~~~~~~~~~w~D~~~ri~-Gpav~dl~~~F~~~W~~~~~ 464 (622)
.| +..+.+. +++|..+.+.|.+.|+....
T Consensus 150 ------------------------n~-E~~~~i~~~~~~~~~~~~F~~~W~~~~p 179 (196)
T 4ggj_A 150 ------------------------NR-ENVLIMEDTEYVRLFLEEFERIWEEFDP 179 (196)
T ss_dssp ------------------------CC-EEEEEECCHHHHHHHHHHHHHHHHHTCC
T ss_pred ------------------------cc-eeEEEEECHHHHHHHHHHHHHHHHhCCC
Confidence 13 3444555 46799999999999997543
No 13
>2nq3_A Itchy homolog E3 ubiquitin protein ligase; C2 domain, UBL conjugation pathway, structural genomics consortium, SGC; 1.80A {Homo sapiens} SCOP: b.7.1.1
Probab=99.76 E-value=1.9e-18 Score=165.51 Aligned_cols=124 Identities=20% Similarity=0.290 Sum_probs=100.3
Q ss_pred eeceEEEEEEEEeecCCCCCccccccccccccccccccccccccCCCCCCCCcEEEEEECCEEEeeeeeecCCCCCeeee
Q 007000 38 LLHGNLDIWVKEAKNLPNMDMFHKKIGDVFGKLNVKVTSKIESHLSDKITSDPYVTVSICGAVIGRTFVISNSESPVWMQ 117 (622)
Q Consensus 38 ~~~g~L~v~V~~A~~L~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~DPYv~V~l~~~~~~kT~vi~~t~nPvWNE 117 (622)
...+.|+|+|++|++|++.+. .+.+||||+|.+++++. ||+++++++||+|||
T Consensus 33 ~~~~~L~V~V~~A~~L~~~~~--------------------------~~~sDPYv~v~~~~~~~-kT~v~~~tlnP~Wne 85 (173)
T 2nq3_A 33 TMKSQLQITVISAKLKENKKN--------------------------WFGPSPYVEVTVDGQSK-KTEKCNNTNSPKWKQ 85 (173)
T ss_dssp SCCEEEEEEEEEEEECCCC----------------------------CCCCCEEEEEEETTEEE-ECCCCSSCSSCEEEE
T ss_pred CCceEEEEEEEEeECCCCccc--------------------------CCCCCeEEEEEECCEEe-EccccCCCCCCeECC
Confidence 345889999999999994432 22389999999998655 999999999999999
Q ss_pred EEEEecCCCCcEEEEEEEecCCcC-CeeeEeEEEeceeecCCC-----eeeecccccCCCCCccccCceEEEEEEeecc
Q 007000 118 HFNVPVAHSAAEVHFVVKDNDFVG-SQIMGAVGIPVEKLCSGD-----KIEGAFPILNSSRKPCKAGAVLSLSIQYTPV 190 (622)
Q Consensus 118 ~f~~~v~~~~~~L~l~V~D~d~~~-dd~IG~~~i~L~~l~~g~-----~~~~W~~L~~~~g~~~k~~G~I~L~l~f~p~ 190 (622)
+|.|.+. ..+.|.|+|||++.++ +++||++.++|.++..+. ....|++|....+. .+..|+|.+.+.+.+.
T Consensus 86 ~f~f~v~-~~~~L~~~V~D~d~~~~dd~lG~~~i~l~~l~~~~~~~~~~~~~~~~L~~~~~~-~~~~G~L~v~l~~l~~ 162 (173)
T 2nq3_A 86 PLTVIVT-PVSKLHFRVWSHQTLKSDVLLGTAALDIYETLKSNNMKLEEVVVTLQLGGDKEP-TETIGDLSICLDGLQL 162 (173)
T ss_dssp EEEEEEC-TTCEEEEEEEECCSSSCCEEEEEEEEEHHHHHHHTTTEESSEEEEEEEEESSCT-TSEEEEEEEEEESEEC
T ss_pred EEEEEeC-CCCEEEEEEEECCCCCCCceEEEEEEEHHHhcccCCCCcceeEEEEECccCCCC-CcccEEEEEEEeeeec
Confidence 9999986 4689999999999886 889999999999987431 12679999765332 2356899999999875
No 14
>1rsy_A Synaptotagmin I; calcium/phospholipid binding protein; 1.90A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.76 E-value=3.2e-18 Score=159.93 Aligned_cols=116 Identities=28% Similarity=0.333 Sum_probs=96.2
Q ss_pred CcccCcceeEe----eceEEEEEEEEeecCCCCCccccccccccccccccccccccccCCCCCCCCcEEEEEEC--CEEE
Q 007000 28 ETHQGSLKVLL----LHGNLDIWVKEAKNLPNMDMFHKKIGDVFGKLNVKVTSKIESHLSDKITSDPYVTVSIC--GAVI 101 (622)
Q Consensus 28 ~~~~~~~~~~~----~~g~L~v~V~~A~~L~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~DPYv~V~l~--~~~~ 101 (622)
+...+++.+-+ ..+.|+|+|++|++|+.+|. .+.+||||+|++. +...
T Consensus 25 ~~~~G~l~~~l~y~~~~~~L~V~v~~a~~L~~~d~--------------------------~g~~dpyv~v~~~~~~~~~ 78 (152)
T 1rsy_A 25 EEKLGKLQYSLDYDFQNNQLLVGIIQAAELPALDM--------------------------GGTSDPYVKVFLLPDKKKK 78 (152)
T ss_dssp -CCCCEEEEEEEEETTTTEEEEEEEEEESCCCCST--------------------------TSCCCEEEEEEEETTCCSC
T ss_pred CCCceEEEEEEEEeCCCCEEEEEEEEeECCCCccC--------------------------CCCcCeEEEEEEEcCCCce
Confidence 33456655554 45799999999999998875 4668999999994 2334
Q ss_pred eeeeeecCCCCCeeeeEEEEecCCC---CcEEEEEEEecCCcC-CeeeEeEEEeceeecCCCeeeecccccC
Q 007000 102 GRTFVISNSESPVWMQHFNVPVAHS---AAEVHFVVKDNDFVG-SQIMGAVGIPVEKLCSGDKIEGAFPILN 169 (622)
Q Consensus 102 ~kT~vi~~t~nPvWNE~f~~~v~~~---~~~L~l~V~D~d~~~-dd~IG~~~i~L~~l~~g~~~~~W~~L~~ 169 (622)
.||+++++++||+|||+|.|.+... ...|.|+|||++.++ +++||++.|+|.++..+...++|++|..
T Consensus 79 ~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V~d~d~~~~~~~iG~~~i~l~~l~~~~~~~~W~~L~~ 150 (152)
T 1rsy_A 79 FETKVHRKTLNPVFNEQFTFKVPYSELGGKTLVMAVYDFDRFSKHDIIGEFKVPMNTVDFGHVTEEWRDLQS 150 (152)
T ss_dssp EECCCCTTCSSCEEEEEEEECCCHHHHTTCEEEEEEEECCSSSCCEEEEEEEEEGGGCCCSSCEEEEEECBC
T ss_pred EeccccCCCCCCcCcccEEEeecHHHcCCCEEEEEEEECCCCCCCcEEEEEEEEchhccCCCCcceEEECCC
Confidence 4999999999999999999988642 478999999999887 8999999999999988888899999964
No 15
>3pyc_A E3 ubiquitin-protein ligase smurf1; phospholipid binding, membrane associate, lipid binding PROT; 1.96A {Homo sapiens} PDB: 2jqz_A
Probab=99.76 E-value=5.3e-18 Score=154.49 Aligned_cols=120 Identities=18% Similarity=0.264 Sum_probs=96.3
Q ss_pred eEEEEEEEEeecCCCCCccccccccccccccccccccccccCCCCCCCCcEEEEEECC-EEEeeeeeecCCCCCeeeeEE
Q 007000 41 GNLDIWVKEAKNLPNMDMFHKKIGDVFGKLNVKVTSKIESHLSDKITSDPYVTVSICG-AVIGRTFVISNSESPVWMQHF 119 (622)
Q Consensus 41 g~L~v~V~~A~~L~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~DPYv~V~l~~-~~~~kT~vi~~t~nPvWNE~f 119 (622)
..|+|+|++|++|+.+|. .|.+||||+|.++. ....||+++++++||+|||+|
T Consensus 5 ~~L~V~v~~a~~L~~~d~--------------------------~g~sDpyv~v~~~~~~~~~kT~v~~~t~nP~wne~f 58 (132)
T 3pyc_A 5 IKIRLTVLCAKNLAKKDF--------------------------FRLPDPFAKIVVDGSGQCHSTDTVKNTLDPKWNQHY 58 (132)
T ss_dssp EEEEEEEEEEESCCCCST--------------------------TCCCCEEEEEEETTTCCEEECCCCSSCSSCEEEEEE
T ss_pred EEEEEEEEEeECCCCCCC--------------------------CCCcCeEEEEEECCCCceEECCccCCCCCCCccCEE
Confidence 579999999999998875 46699999999975 334599999999999999999
Q ss_pred EEecCCCCcEEEEEEEecCCcC----CeeeEeEEEeceeec-CCCeeeecccccCCCC-CccccCceEEEEEEe
Q 007000 120 NVPVAHSAAEVHFVVKDNDFVG----SQIMGAVGIPVEKLC-SGDKIEGAFPILNSSR-KPCKAGAVLSLSIQY 187 (622)
Q Consensus 120 ~~~v~~~~~~L~l~V~D~d~~~----dd~IG~~~i~L~~l~-~g~~~~~W~~L~~~~g-~~~k~~G~I~L~l~f 187 (622)
.|.+... +.|.|+|||++..+ +++||++.+++++|. .+.....|++|....+ ...+..|+|++.+..
T Consensus 59 ~f~v~~~-~~l~~~v~d~d~~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~~L~~~~~~~~~~~~G~i~v~l~~ 131 (132)
T 3pyc_A 59 DLYVGKT-DSITISVWNHKKIHKKQGAGFLGCVRLLSNAISRLKDTGYQRLDLCKLNPSDTDAVRGQIVVSLQT 131 (132)
T ss_dssp EEEEETT-CCEEEEEEEGGGTTSSTTTTEEEEEEECHHHHHHHTTSCCEEEECBCSSTTCCCCCCSEEEEEEEE
T ss_pred EEEeCCC-CEEEEEEEECCCCCCCCCCCceEEEEEeHHHhhcccccCcEEEeeeecCCCCCCceeEEEEEEEEc
Confidence 9998655 35999999999875 689999999999883 3344467899875422 222357899998865
No 16
>2b3r_A Phosphatidylinositol-4-phosphate 3-kinase C2 DOMA containing alpha polypeptide; C2 domain, lipid binding, PI3-kinase, transferase; 2.30A {Mus musculus}
Probab=99.75 E-value=6.6e-18 Score=154.71 Aligned_cols=109 Identities=16% Similarity=0.266 Sum_probs=91.5
Q ss_pred ceeEeeceEEEEEEEEeecCCCCCccccccccccccccccccccccccCCCCCCCCcEEEEEEC----CEEEeeeeeecC
Q 007000 34 LKVLLLHGNLDIWVKEAKNLPNMDMFHKKIGDVFGKLNVKVTSKIESHLSDKITSDPYVTVSIC----GAVIGRTFVISN 109 (622)
Q Consensus 34 ~~~~~~~g~L~v~V~~A~~L~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~DPYv~V~l~----~~~~~kT~vi~~ 109 (622)
++.-...+.|+|+|++|++|+. +. .+.+||||+|++. .....||+++++
T Consensus 13 ~~~~~~~~~L~V~V~~a~~L~~-~~--------------------------~g~~DPyv~v~l~~~~~~~~~~kT~v~~~ 65 (134)
T 2b3r_A 13 LSVSYRNGTLFIMVMHIKDLVT-ED--------------------------GADPNPYVKTYLLPDTHKTSKRKTKISRK 65 (134)
T ss_dssp EEEEEETTEEEEEEEEEECCCC-TT--------------------------SCCCCEEEEEEEESCSSSCCCEECCCCCS
T ss_pred EEEeecCCEEEEEEEEeeCCCC-CC--------------------------CCCCCeEEEEEEEcCCCCCceecCCcCcC
Confidence 4455566899999999999995 43 4678999999992 123349999999
Q ss_pred CCCCeeeeEEEEe-cCC---CCcEEEEEEEecCCcC-CeeeEeEEEeceeecCCCeeeecccccC
Q 007000 110 SESPVWMQHFNVP-VAH---SAAEVHFVVKDNDFVG-SQIMGAVGIPVEKLCSGDKIEGAFPILN 169 (622)
Q Consensus 110 t~nPvWNE~f~~~-v~~---~~~~L~l~V~D~d~~~-dd~IG~~~i~L~~l~~g~~~~~W~~L~~ 169 (622)
++||+|||+|.|. +.. ....|.|+|||++..+ +++||++.++|+++..+...+.|++|..
T Consensus 66 t~nP~wnE~f~f~~v~~~~l~~~~L~~~V~d~d~~~~~~~lG~~~i~l~~l~~~~~~~~W~~L~~ 130 (134)
T 2b3r_A 66 TRNPTFNEMLVYSGYSKETLRQRELQLSVLSAESLRENFFLGGITLPLKDFNLSKETVKWYQLTA 130 (134)
T ss_dssp CSSCEEEEEEEEESCCHHHHTTCEEEEEEEECCSSSCCEEEEEEEEEGGGSCTTSCEEEEEECBC
T ss_pred CCCCCCccEEEECCcCHHHhCcCEEEEEEEECCCCCCCcEEEEEEEEhhhccCCCCcceeEECCC
Confidence 9999999999998 753 2368999999999887 8899999999999988888899999964
No 17
>2r83_A Synaptotagmin-1; C2A-C2B, exocytosis, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal-binding palmitate; 2.70A {Homo sapiens} SCOP: b.7.1.2
Probab=99.75 E-value=6.6e-18 Score=173.54 Aligned_cols=178 Identities=22% Similarity=0.275 Sum_probs=126.6
Q ss_pred eceEEEEEEEEeecCCCCCccccccccccccccccccccccccCCCCCCCCcEEEEEECC--EEEeeeeeecCCCCCeee
Q 007000 39 LHGNLDIWVKEAKNLPNMDMFHKKIGDVFGKLNVKVTSKIESHLSDKITSDPYVTVSICG--AVIGRTFVISNSESPVWM 116 (622)
Q Consensus 39 ~~g~L~v~V~~A~~L~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~DPYv~V~l~~--~~~~kT~vi~~t~nPvWN 116 (622)
..+.|+|+|++|++|+.+|. .+.+||||+|.++. ....||+++++++||+||
T Consensus 17 ~~~~L~v~v~~a~~L~~~d~--------------------------~~~~dpyv~v~~~~~~~~~~~T~~~~~~~nP~wn 70 (284)
T 2r83_A 17 QNNQLLVGIIQAAELPALDM--------------------------GGTSDPYVKVFLLPDKKKKFETKVHRKTLNPVFN 70 (284)
T ss_dssp TTTEEEEEEEEEECCCCCSS--------------------------SSSCCEEEEEEEETCTTSCEECCCCCSCSSCEEE
T ss_pred CCCEEEEEEEEeeCCCCCCC--------------------------CCCCCeEEEEEEEcCCCceEeCCcccCCCCCeeC
Confidence 45799999999999998875 46799999999953 223499999999999999
Q ss_pred eEEEEecCCC---CcEEEEEEEecCCcC-CeeeEeEEEeceeecCCCeeeecccccCCCCCccccCceEEEEEEeecccc
Q 007000 117 QHFNVPVAHS---AAEVHFVVKDNDFVG-SQIMGAVGIPVEKLCSGDKIEGAFPILNSSRKPCKAGAVLSLSIQYTPVEN 192 (622)
Q Consensus 117 E~f~~~v~~~---~~~L~l~V~D~d~~~-dd~IG~~~i~L~~l~~g~~~~~W~~L~~~~g~~~k~~G~I~L~l~f~p~~~ 192 (622)
|+|.|.+... ...|.|+|||++.++ +++||++.++|.++..+...+.|++|....+......|.+++.++|.|...
T Consensus 71 e~f~f~v~~~~~~~~~l~~~V~d~d~~~~~~~lG~~~i~l~~l~~~~~~~~w~~L~~~~~~~~~~~G~i~l~l~~~p~~~ 150 (284)
T 2r83_A 71 EQFTFKVPYSELAGKTLVMAVYDFDRFSKHDIIGEFKVPMNTVDFGHVTEEWRDLQSAEKEEQEKLGDICFSLRYVPTAG 150 (284)
T ss_dssp EEEEECCCGGGCTTCEEEEEEEECCSSSCCCEEEEEEEEGGGCCCSSCEEEEEECBCCSSCCCCCCCEEEEEEEEETTTT
T ss_pred ceEEEEechHHhCcCEEEEEEEECCCCCCCceeEEEEEcchhcccCCcceeEEEeeccccccccccccEEEEEEecCcCC
Confidence 9999998643 378999999999887 899999999999998888889999997654322235689999999987543
Q ss_pred -cccc---ccCCCCCCCccCCCCCCCCCcCCCeEEEeecCcCCCCccceeEecCCccccch
Q 007000 193 -MSLY---YRGVGSGPDYIGVPGTYFPLRRGGKVTLYQDAHAHDGCLADLKLDGGVQFNHE 249 (622)
Q Consensus 193 -l~~~---~~g~~~~~~~~~~~~~~~~~~~g~~v~l~~~g~~~~~~~~~~~~~~~~~~~~~ 249 (622)
+... .+++.. .+.. ....|++ ++.+..+|......++.+...+.+|..++
T Consensus 151 ~l~v~v~~a~~L~~-~d~~---~~~dpyv---~v~~~~~~~~~~~~kT~v~~~t~nP~wne 204 (284)
T 2r83_A 151 KLTVVILEAKNLKK-MDVG---GLSDPYV---KIHLMQNGKRLKKKKTTIKKNTLNPYYNE 204 (284)
T ss_dssp EEEEEEEEEESCCC-CSTT---SCCCEEE---EEEEEETTEEEEEEECCCCCSCSSCEEEE
T ss_pred ceEEEEEEeECCCC-cCCC---CCcCeEE---EEEEEeCCcEeeeeccceecCCCCCEEce
Confidence 1111 111111 1111 1235554 56666655432234455555555665443
No 18
>3f04_A Synaptotagmin-1; C2A, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal- binding, palmitate, phosphoprotein; 1.35A {Homo sapiens} SCOP: b.7.1.2 PDB: 3f01_A 3f05_A 3f00_A 1byn_A 2k45_A 2k4a_A 2k8m_A 2ki6_A*
Probab=99.75 E-value=2.6e-18 Score=158.63 Aligned_cols=104 Identities=27% Similarity=0.319 Sum_probs=90.1
Q ss_pred eceEEEEEEEEeecCCCCCccccccccccccccccccccccccCCCCCCCCcEEEEEEC--CEEEeeeeeecCCCCCeee
Q 007000 39 LHGNLDIWVKEAKNLPNMDMFHKKIGDVFGKLNVKVTSKIESHLSDKITSDPYVTVSIC--GAVIGRTFVISNSESPVWM 116 (622)
Q Consensus 39 ~~g~L~v~V~~A~~L~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~DPYv~V~l~--~~~~~kT~vi~~t~nPvWN 116 (622)
..+.|+|+|++|++|+.+|. .+.+||||+|.+. +....||++++++.||+||
T Consensus 32 ~~~~L~v~v~~a~~L~~~d~--------------------------~g~~dpyv~v~l~~~~~~~~kT~v~~~t~nP~wn 85 (143)
T 3f04_A 32 QNNQLLVGIIQAAELPALDM--------------------------GGTSDPYVKVFLLPDKKKKFETKVHRKTLNPVFN 85 (143)
T ss_dssp TTTEEEEEEEEEECCCCBGG--------------------------GBCCCEEEEEEEESCCSCCEECCCCCSCSSCEEE
T ss_pred CCCEEEEEEEEecCCCCCCC--------------------------CCCcCcEEEEEEECCCCccEECccCcCCCCCcCc
Confidence 56799999999999998775 3568999999993 2334499999999999999
Q ss_pred eEEEEecCCC---CcEEEEEEEecCCcC-CeeeEeEEEeceeecCCCeeeeccccc
Q 007000 117 QHFNVPVAHS---AAEVHFVVKDNDFVG-SQIMGAVGIPVEKLCSGDKIEGAFPIL 168 (622)
Q Consensus 117 E~f~~~v~~~---~~~L~l~V~D~d~~~-dd~IG~~~i~L~~l~~g~~~~~W~~L~ 168 (622)
|+|.|.+... ...|.|+|||++.++ +++||++.++|+++..+...+.|++|.
T Consensus 86 e~f~f~v~~~~l~~~~L~i~V~d~d~~~~~~~iG~~~i~l~~l~~~~~~~~W~~L~ 141 (143)
T 3f04_A 86 EQFTFKVPYSELGGKTLVMAVYDFDRFSKHDIIGEFKVPMNTVDFGHVTEEWRDLQ 141 (143)
T ss_dssp EEEEECCCHHHHTTCEEEEEEEECCSSSCCEEEEEEEEEGGGCCTTSCEEEEEECB
T ss_pred CeEEEeecHhhcCCCEEEEEEEeCCCCCCCceEEEEEEEHHHccCCCCcceEEECc
Confidence 9999988643 268999999999887 899999999999999888889999995
No 19
>1a25_A CALB, protein kinase C (beta); calcium++/phospholipid binding protein, calcium-binding protein; HET: PSE; 2.70A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.74 E-value=9.4e-18 Score=156.15 Aligned_cols=106 Identities=26% Similarity=0.400 Sum_probs=90.5
Q ss_pred EeeceEEEEEEEEeecCCCCCccccccccccccccccccccccccCCCCCCCCcEEEEEECC----EEEeeeeeecCCCC
Q 007000 37 LLLHGNLDIWVKEAKNLPNMDMFHKKIGDVFGKLNVKVTSKIESHLSDKITSDPYVTVSICG----AVIGRTFVISNSES 112 (622)
Q Consensus 37 ~~~~g~L~v~V~~A~~L~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~DPYv~V~l~~----~~~~kT~vi~~t~n 112 (622)
-...+.|+|+|++|++|+.+|. .+.+||||+|++.. ....||+++++++|
T Consensus 27 ~~~~~~L~v~v~~a~~L~~~d~--------------------------~g~~dpyv~v~~~~~~~~~~~~kT~v~~~t~n 80 (149)
T 1a25_A 27 HIDREVLIVVVRDAKNLVPMDP--------------------------NGLSDPYVKLKLIPDPKSESKQKTKTIKCSLN 80 (149)
T ss_dssp EESSSEEEEEEEEEESCCCCST--------------------------TSCCCEEEEEEEESCTTCSSCEECCCCSSCSS
T ss_pred EecCCEEEEEEEEeeCCCCCCC--------------------------CCCcCeEEEEEEECCCCCcceEecceeCCCCC
Confidence 3446899999999999998875 46689999999963 33449999999999
Q ss_pred CeeeeEEEEecCCC--CcEEEEEEEecCCcC-CeeeEeEEEeceeecCCCeeeecccccC
Q 007000 113 PVWMQHFNVPVAHS--AAEVHFVVKDNDFVG-SQIMGAVGIPVEKLCSGDKIEGAFPILN 169 (622)
Q Consensus 113 PvWNE~f~~~v~~~--~~~L~l~V~D~d~~~-dd~IG~~~i~L~~l~~g~~~~~W~~L~~ 169 (622)
|+|||+|.|.+... ...|.|+|||++..+ +++||++.|+|.+|..+ ..+.||+|..
T Consensus 81 P~wne~f~f~v~~~~~~~~L~i~V~d~d~~~~~~~iG~~~i~l~~l~~~-~~~~W~~L~~ 139 (149)
T 1a25_A 81 PEWNETFRFQLKESDKDRRLSVEIWDWDLTSRNDFMGSLSFGISELQKA-GVDGWFKLLS 139 (149)
T ss_dssp CEEEEEEEEECCSGGGGCEEEEEEEECCSSSCCEEEEEEEEEHHHHTTC-CEEEEEECBC
T ss_pred CcCCcEEEEEeccccCCCEEEEEEEECCCCCCCCEEEEEEEEHHHhCcC-ccCCeEEccC
Confidence 99999999998654 368999999999886 89999999999999866 4788999964
No 20
>2d8k_A Synaptotagmin VII; exocytosis, calcium binding, lysosome, C2 domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.73 E-value=1.5e-17 Score=153.31 Aligned_cols=106 Identities=23% Similarity=0.226 Sum_probs=90.7
Q ss_pred eceEEEEEEEEeecCCCCCccccccccccccccccccccccccCCCCCCCCcEEEEEEC--CEEEeeeeeecCCCCCeee
Q 007000 39 LHGNLDIWVKEAKNLPNMDMFHKKIGDVFGKLNVKVTSKIESHLSDKITSDPYVTVSIC--GAVIGRTFVISNSESPVWM 116 (622)
Q Consensus 39 ~~g~L~v~V~~A~~L~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~DPYv~V~l~--~~~~~kT~vi~~t~nPvWN 116 (622)
..+.|+|+|++|++|+.+|. .+++||||+|.+. +....||+++++++||+||
T Consensus 24 ~~~~L~v~v~~a~~L~~~d~--------------------------~g~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wn 77 (141)
T 2d8k_A 24 QESTLTVKIMKAQELPAKDF--------------------------SGTSDPFVKIYLLPDKKHKLETKVKRKNLNPHWN 77 (141)
T ss_dssp SSCCEEEEEEEEESCCCCSS--------------------------SSCCCEEEEEEEESCCSSEEECCCCTTCSSCCCC
T ss_pred CCCEEEEEEEEeECCCCCCC--------------------------CCCCCcEEEEEEECCCCccEeCceEcCCCCCccc
Confidence 56899999999999998875 4679999999994 2234499999999999999
Q ss_pred eEEEEecCC----CCcEEEEEEEecCCcC-CeeeEeEEEeceeecCCCeeeecccccCC
Q 007000 117 QHFNVPVAH----SAAEVHFVVKDNDFVG-SQIMGAVGIPVEKLCSGDKIEGAFPILNS 170 (622)
Q Consensus 117 E~f~~~v~~----~~~~L~l~V~D~d~~~-dd~IG~~~i~L~~l~~g~~~~~W~~L~~~ 170 (622)
|+|.|.+.. ....|.|+|||++..+ +++||++.++|+++..+...+.|++|...
T Consensus 78 e~f~f~~~~~~~~~~~~l~i~V~d~d~~~~~~~iG~~~i~l~~l~~~~~~~~W~~L~~~ 136 (141)
T 2d8k_A 78 ETFLFEGFPYEKVVQRILYLQVLDYDRFSRNDPIGEVSIPLNKVDLTQMQTFWKDLKPS 136 (141)
T ss_dssp EEEEECSCCHHHHTTSEEEEEEEECCSSSSCEEEEEEEEETTTSCTTSCEEEEECCEEC
T ss_pred cEEEECccCHHHcccCEEEEEEEECCCCCCCcEEEEEEEEhhhhcCCCCccEEEECcCC
Confidence 999998532 2468999999999887 89999999999999988888999999654
No 21
>2z0u_A WW domain-containing protein 1; C2 domain, alternative splicing, coiled coil, cytoplasm, phosphorylation, polymorphism, lipid binding protein; 2.20A {Homo sapiens}
Probab=99.73 E-value=4e-18 Score=160.33 Aligned_cols=105 Identities=17% Similarity=0.261 Sum_probs=89.7
Q ss_pred eeceEEEEEEEEeecCCCCCccccccccccccccccccccccccCCCCCCCCcEEEEEECC---E--EEeeeeeecCCCC
Q 007000 38 LLHGNLDIWVKEAKNLPNMDMFHKKIGDVFGKLNVKVTSKIESHLSDKITSDPYVTVSICG---A--VIGRTFVISNSES 112 (622)
Q Consensus 38 ~~~g~L~v~V~~A~~L~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~DPYv~V~l~~---~--~~~kT~vi~~t~n 112 (622)
...+.|+|+|++|++|+.+|. +|.+||||++++.. . ...||+++++|+|
T Consensus 40 ~~~~~L~V~Vi~a~~L~~~d~--------------------------~g~sDPyVkv~l~~~~~~~~~~~kT~v~~~tln 93 (155)
T 2z0u_A 40 EKNKQFAILIIQLSNLSALLQ--------------------------QQDQKVNIRVAVLPCSESTTCLFRTRPLDASDT 93 (155)
T ss_dssp TTTTEEEEEEEEEECGGGTCC--------------------------SCCSEEEEEEEEESCSCHHHHEEECCCEECCSS
T ss_pred CCCCEEEEEEEEccCcCCccc--------------------------CCCCCEEEEEEEecCCCCCccceeCCcCCCCCC
Confidence 346799999999999998875 56799999999954 2 2349999999999
Q ss_pred CeeeeEEEEecCCC---CcEEEEEEEecCCcC-CeeeEeEEEeceeec-CCCeeeeccccc
Q 007000 113 PVWMQHFNVPVAHS---AAEVHFVVKDNDFVG-SQIMGAVGIPVEKLC-SGDKIEGAFPIL 168 (622)
Q Consensus 113 PvWNE~f~~~v~~~---~~~L~l~V~D~d~~~-dd~IG~~~i~L~~l~-~g~~~~~W~~L~ 168 (622)
|+|||+|.|.+... ...|.|+|||+|..+ +++||++.++|+++. .+....+||+|+
T Consensus 94 P~wnE~F~f~v~~~~l~~~~L~~~V~d~d~~~~~d~iG~~~i~l~~l~~~~~~~~~W~~L~ 154 (155)
T 2z0u_A 94 LVFNEVFWVSMSYPALHQKTLRVDVCTTDRSHLEECLGGAQISLAEVCRSGERSTRWYNLL 154 (155)
T ss_dssp EEEEEEEEEECCHHHHHHCEEEEEEEEECTTSCEEEEEEEEEECTTSCTTCCCEEEEEEEB
T ss_pred CccccEEEEEcCHHHhCcCEEEEEEEECCCCCCCcEEEEEEEEHHHccCCCCccccceEcc
Confidence 99999999998653 368999999999887 889999999999996 366788999985
No 22
>3fdw_A Synaptotagmin-like protein 4; structural genomics, phospholipid binding, alternative splicing, cell membrane, cytoplasmic vesicle, membrane; 2.20A {Homo sapiens}
Probab=99.73 E-value=4.7e-18 Score=158.05 Aligned_cols=111 Identities=19% Similarity=0.285 Sum_probs=91.1
Q ss_pred EeeceEEEEEEEEeecCCCCCccccccccccccccccccccccccCCCCCCCCcEEEEEECC----EEEeeeeeecCCCC
Q 007000 37 LLLHGNLDIWVKEAKNLPNMDMFHKKIGDVFGKLNVKVTSKIESHLSDKITSDPYVTVSICG----AVIGRTFVISNSES 112 (622)
Q Consensus 37 ~~~~g~L~v~V~~A~~L~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~DPYv~V~l~~----~~~~kT~vi~~t~n 112 (622)
....+.|.|+|++|++|+.+|.. .+.+||||+|.+.. ....||+++++++|
T Consensus 19 ~~~~~~L~V~v~~a~~L~~~d~~-------------------------~~~~dpyv~v~l~~~~~~~~~~kT~v~~~t~n 73 (148)
T 3fdw_A 19 EQQTQSLVVHVKECHQLAYADEA-------------------------KKRSNPYVKTYLLPDKSRQGKRKTSIKRDTVN 73 (148)
T ss_dssp ETTTTEEEEEEEEEESCCCSBTT-------------------------TTBCCEEEEEEEETCCSGGGEEECCCCSSCSS
T ss_pred eCCCCEEEEEEEEecCCCCcccC-------------------------CCCCCeEEEEEEEcCCcccCccccccCCCCCC
Confidence 33468999999999999987621 45689999999962 12449999999999
Q ss_pred CeeeeEEEEecCCCC---cEEEEEEEecCCcC-CeeeEeEEEeceeecCCCeeeecccccCCCC
Q 007000 113 PVWMQHFNVPVAHSA---AEVHFVVKDNDFVG-SQIMGAVGIPVEKLCSGDKIEGAFPILNSSR 172 (622)
Q Consensus 113 PvWNE~f~~~v~~~~---~~L~l~V~D~d~~~-dd~IG~~~i~L~~l~~g~~~~~W~~L~~~~g 172 (622)
|+|||+|.|.+.... ..|.|+|||++..+ +++||++.++|+++..+...+.|++|..+.+
T Consensus 74 P~wne~f~f~v~~~~~~~~~L~~~V~d~d~~~~~~~iG~~~i~l~~l~~~~~~~~W~~L~~~~~ 137 (148)
T 3fdw_A 74 PLYDETLRYEIPESLLAQRTLQFSVWHHGRFGRNTFLGEAEIQMDSWKLDKKLDHCLPLHGKIS 137 (148)
T ss_dssp CEEEEEEEEECCSTTGGGCEEEEEEEEECGGGCEEEEEEEEEEHHHHHHHCCSEEEEECBCC--
T ss_pred CcEeeEEEEEeChhHhCceEEEEEEEECCCCcCCcEEEEEEEEcccccccCCccceEECcCccc
Confidence 999999999986542 57999999999887 8899999999999987777889999976543
No 23
>2bwq_A Regulating synaptic membrane exocytosis protein 2; C2 domain, neurotransmitter release, transport protein; 1.41A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.72 E-value=1.9e-17 Score=149.88 Aligned_cols=103 Identities=21% Similarity=0.285 Sum_probs=82.8
Q ss_pred eeceEEEEEEEEeecCCCCCccccccccccccccccccccccccCCCCCCCCcEEEEEEC----CEEEeeeeeecCCCCC
Q 007000 38 LLHGNLDIWVKEAKNLPNMDMFHKKIGDVFGKLNVKVTSKIESHLSDKITSDPYVTVSIC----GAVIGRTFVISNSESP 113 (622)
Q Consensus 38 ~~~g~L~v~V~~A~~L~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~DPYv~V~l~----~~~~~kT~vi~~t~nP 113 (622)
...+.|.|+|++|++|+.+|. .|.+||||+|++. +....||++++++.||
T Consensus 15 ~~~~~L~v~v~~a~~L~~~d~--------------------------~~~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP 68 (129)
T 2bwq_A 15 KVGHQLIVTILGAKDLPSRED--------------------------GRPRNPYVKIYFLPDRSDKNKRRTKTVKKTLEP 68 (129)
T ss_dssp TTTTEEEEEEEEEESCCCCTT--------------------------SCCBCEEEEEEEESSCSGGGEEECCCCSSBSSC
T ss_pred cCCCEEEEEEEEeeCCCCCCC--------------------------CCCCCCEEEEEEecCCCCCcceecccccCCCCC
Confidence 345889999999999998775 4668999999992 2334499999999999
Q ss_pred eeeeEEEEecCC----CCcEEEEEEEecCCcC---CeeeEeEEEeceeecCCCeeeecccc
Q 007000 114 VWMQHFNVPVAH----SAAEVHFVVKDNDFVG---SQIMGAVGIPVEKLCSGDKIEGAFPI 167 (622)
Q Consensus 114 vWNE~f~~~v~~----~~~~L~l~V~D~d~~~---dd~IG~~~i~L~~l~~g~~~~~W~~L 167 (622)
+|||+|.|.+.. ....|.|+|||++..+ +++||++.++|+++.... .++||+|
T Consensus 69 ~wne~f~f~~~~~~~~~~~~l~~~V~d~d~~~~~~~~~lG~~~i~l~~l~~~~-~~~W~~L 128 (129)
T 2bwq_A 69 KWNQTFIYSPVHRREFRERMLEITLWDQARVREEESEFLGEILIELETALLDD-EPHWYKL 128 (129)
T ss_dssp EEEEEEEECSCCGGGGGGCEEEEEEEEC-------CEEEEEEEEEGGGCCCSS-CEEEEEC
T ss_pred ccccEEEEccCCHHHhcCCeEEEEEEECCcCcCcCCceeEEEEEEccccCCCc-CCccEEC
Confidence 999999999532 2368999999999876 789999999999987544 7899998
No 24
>3rdl_A Protein kinase C alpha type; protein kinase PKC, transferase; 1.50A {Rattus norvegicus} PDB: 3gpe_A 3rdj_A 3twy_A 1dsy_A* 4dnl_A* 2uzp_A*
Probab=99.72 E-value=2.2e-17 Score=150.84 Aligned_cols=106 Identities=26% Similarity=0.393 Sum_probs=90.0
Q ss_pred eeceEEEEEEEEeecCCCCCccccccccccccccccccccccccCCCCCCCCcEEEEEEC----CEEEeeeeeecCCCCC
Q 007000 38 LLHGNLDIWVKEAKNLPNMDMFHKKIGDVFGKLNVKVTSKIESHLSDKITSDPYVTVSIC----GAVIGRTFVISNSESP 113 (622)
Q Consensus 38 ~~~g~L~v~V~~A~~L~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~DPYv~V~l~----~~~~~kT~vi~~t~nP 113 (622)
+..|.|.|+|++|++|+.+|. .+.+||||+|.+. +....||++++++.||
T Consensus 13 ~~~~~L~v~v~~a~~L~~~d~--------------------------~~~~dpyv~v~~~~~~~~~~~~kT~~~~~t~nP 66 (137)
T 3rdl_A 13 VTDEKLHVTVRDAKNLIPMDP--------------------------NGLSDPYVKLKLIPDPKNESKQKTKTIRSTLNP 66 (137)
T ss_dssp EETTEEEEEEEEEESCCCCST--------------------------TSCCCEEEEEEEECCTTCCCCEECCCCCSCSSC
T ss_pred EcCCEEEEEEEEeeCCCCCCC--------------------------CCCCCeeEEEEEEcCCCCCeeecCceEcCCCCC
Confidence 356899999999999998875 4679999999993 2333499999999999
Q ss_pred eeeeEEEEecCCCC--cEEEEEEEecCCcC-CeeeEeEEEeceeecCCCeeeecccccCC
Q 007000 114 VWMQHFNVPVAHSA--AEVHFVVKDNDFVG-SQIMGAVGIPVEKLCSGDKIEGAFPILNS 170 (622)
Q Consensus 114 vWNE~f~~~v~~~~--~~L~l~V~D~d~~~-dd~IG~~~i~L~~l~~g~~~~~W~~L~~~ 170 (622)
+|||+|.|.+.... ..|.|+|||++..+ +++||++.++|+++..+. .++|++|.+.
T Consensus 67 ~wne~f~f~~~~~~~~~~l~i~v~d~d~~~~~~~iG~~~i~l~~l~~~~-~~~W~~L~~~ 125 (137)
T 3rdl_A 67 QWNESFTFKLKPSDKDRRLSVEIWDWDRTTRNDFMGSLSFGVSELMKMP-ASGWYKLLNQ 125 (137)
T ss_dssp EEEEEEEEECCGGGGGCEEEEEEEECCSSSCCEEEEEEEEEHHHHHHSC-EEEEEECBCH
T ss_pred CcccEEEEEcCchhcCCEEEEEEEECCCCCCCceEEEEEEeHHHhccCc-cCceEECcCc
Confidence 99999999986432 58999999999887 899999999999998655 7899999753
No 25
>1rh8_A Piccolo protein; beta-sandwich, metal binding protein; NMR {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.72 E-value=6e-18 Score=155.88 Aligned_cols=108 Identities=25% Similarity=0.278 Sum_probs=91.4
Q ss_pred EeeceEEEEEEEEeecCCCCCccccccccccccccccccccccccCCCCCCCCcEEEEEECCE-------------EEee
Q 007000 37 LLLHGNLDIWVKEAKNLPNMDMFHKKIGDVFGKLNVKVTSKIESHLSDKITSDPYVTVSICGA-------------VIGR 103 (622)
Q Consensus 37 ~~~~g~L~v~V~~A~~L~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~DPYv~V~l~~~-------------~~~k 103 (622)
-+..|.|+|+|++|++|+.+|. .|.+||||+|++... ...|
T Consensus 14 ~y~~~~L~V~v~~a~~L~~~d~--------------------------~g~~Dpyv~v~~~~~~~~~~~~~~~~~~~~~k 67 (142)
T 1rh8_A 14 NYDLGNLIIHILQARNLVPRDN--------------------------NGYSDPFVKVYLLPGRGQVMVVQNASAEYKRR 67 (142)
T ss_dssp EEETTEEEEEEEEEESCCCCSS--------------------------SSCSCCEEEEEETTSSCCCEECCCCCHHHHTT
T ss_pred EEcCCEEEEEEEEecCCCCCCC--------------------------CCCCCceEEEEEecCCCcccccccccccceee
Confidence 3446899999999999998875 567999999999753 2359
Q ss_pred eeeecCCCCCeeeeEEEEe-cCC---CCcEEEEEEEecCCcC-CeeeEeEEEeceeecCCCeeeecccccCC
Q 007000 104 TFVISNSESPVWMQHFNVP-VAH---SAAEVHFVVKDNDFVG-SQIMGAVGIPVEKLCSGDKIEGAFPILNS 170 (622)
Q Consensus 104 T~vi~~t~nPvWNE~f~~~-v~~---~~~~L~l~V~D~d~~~-dd~IG~~~i~L~~l~~g~~~~~W~~L~~~ 170 (622)
|+++++++||+|||+|.|. +.. ....|.|+|||++..+ +++||++.|+|+++..+...+.|++|...
T Consensus 68 T~v~~~t~nP~wne~f~f~~v~~~~l~~~~l~i~V~d~d~~~~~~~lG~~~i~l~~l~~~~~~~~W~~L~~~ 139 (142)
T 1rh8_A 68 TKYVQKSLNPEWNQTVIYKSISMEQLMKKTLEVTVWDYDRFSSNDFLGEVLIDLSSTSHLDNTPRWYPLKEQ 139 (142)
T ss_dssp TTTTHHHHSCEEEEEEEECSCCHHHHTTCEEEEEEEEECSSSCEEEEEEEEEETTSCGGGTTCCEEEECBCC
T ss_pred ccccCCCCCCCCCCEEEECCcCHHHccCCEEEEEEEECCCCCCCceEEEEEEeccccccCCCCCeEEECCcc
Confidence 9999999999999999997 542 2468999999999987 88999999999999876677899999654
No 26
>1wfm_A Synaptotagmin XIII; C2 domain, exocytosis, neurotransmitter release, riken structural genomics/proteomics initiative, RSGI, structural genomics; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.72 E-value=2.7e-17 Score=151.27 Aligned_cols=103 Identities=17% Similarity=0.175 Sum_probs=87.1
Q ss_pred eceEEEEEEEEeecCCCCCccccccccccccccccccccccccCCCCCCCCcEEEEEEC---CEEEeeeeeecCCCCCee
Q 007000 39 LHGNLDIWVKEAKNLPNMDMFHKKIGDVFGKLNVKVTSKIESHLSDKITSDPYVTVSIC---GAVIGRTFVISNSESPVW 115 (622)
Q Consensus 39 ~~g~L~v~V~~A~~L~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~DPYv~V~l~---~~~~~kT~vi~~t~nPvW 115 (622)
..+.|+|+|++|++ +|. .|.+||||+|.+. +....||+++++++||+|
T Consensus 24 ~~~~L~V~v~~a~~---~d~--------------------------~g~sDPyv~v~l~~~~~~~~~kT~v~~~tlnP~w 74 (138)
T 1wfm_A 24 QKAELFVTRLEAVT---SNH--------------------------DGGCDCYVQGSVANRTGSVEAQTALKKRQLHTTW 74 (138)
T ss_dssp TTTEEEEEEEEEEC---CCC--------------------------SSCCCEEEEEEEEETTEEEEEECCCCCCCSSEEC
T ss_pred CCCEEEEEEEEEEc---CCC--------------------------CCCcceEEEEEEEcCCCcccEecccCcCCCCCcC
Confidence 56899999999993 443 5679999999993 344459999999999999
Q ss_pred eeEEEEecCCC---CcEEEEEEEecCCcC-CeeeEeEEEeceeecCCCeeeecccccCC
Q 007000 116 MQHFNVPVAHS---AAEVHFVVKDNDFVG-SQIMGAVGIPVEKLCSGDKIEGAFPILNS 170 (622)
Q Consensus 116 NE~f~~~v~~~---~~~L~l~V~D~d~~~-dd~IG~~~i~L~~l~~g~~~~~W~~L~~~ 170 (622)
||+|.|.+... ...|.|+|||+|.++ +++||++.++|.++..+...+.|++|...
T Consensus 75 nE~f~f~v~~~~l~~~~L~~~V~d~d~~~~dd~lG~~~i~l~~l~~~~~~~~W~~L~~~ 133 (138)
T 1wfm_A 75 EEGLVLPLAEEELPTATLTLTLRTCDRFSRHSVAGELRLGLDGTSVPLGAAQWGELKTS 133 (138)
T ss_dssp SSCEEEECCTTSSTTCEEEEEEEECCSSCTTSCSEEEEEESSSSSSCTTCCEEEECCCC
T ss_pred CceEEEEecHHHcCCCEEEEEEEECCCCCCCcEEEEEEEEcccccCcccccceeeCcCC
Confidence 99999998653 368999999999887 89999999999999766778899999653
No 27
>2q3x_A Regulating synaptic membrane exocytosis protein 1; C2 domain dimer, neurotransmitter release, transport protein; HET: MSE; 1.73A {Rattus norvegicus}
Probab=99.72 E-value=1.9e-17 Score=158.02 Aligned_cols=108 Identities=21% Similarity=0.267 Sum_probs=92.5
Q ss_pred eeceEEEEEEEEeecCCCCCccccccccccccccccccccccccCCCCCCCCcEEEEEECC--E--EEeeeeeecCCCCC
Q 007000 38 LLHGNLDIWVKEAKNLPNMDMFHKKIGDVFGKLNVKVTSKIESHLSDKITSDPYVTVSICG--A--VIGRTFVISNSESP 113 (622)
Q Consensus 38 ~~~g~L~v~V~~A~~L~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~DPYv~V~l~~--~--~~~kT~vi~~t~nP 113 (622)
+..+.|.|+|++|++|+.+|.. .+.+||||+|.+.. . ...||+++++++||
T Consensus 27 y~~~~L~V~v~~a~~L~~~d~~-------------------------~g~~DPyv~v~l~~~~~~~~~~kT~v~~~t~nP 81 (171)
T 2q3x_A 27 DKKGQLEVEVIRARSLTQKPGS-------------------------KSTPAPYVKVYLLENGACIAKKKTRIARKTLDP 81 (171)
T ss_dssp EETTEEEEEEEEEESCCCCC----------------------------CCCEEEEEEEEEETTEEEEEEECCCCCSCSSC
T ss_pred ECCCEEEEEEEEeeCCCCCCcC-------------------------CCCCCceEEEEEECCCccccceeCccCCCCCCC
Confidence 3678999999999999988731 36689999999953 2 34599999999999
Q ss_pred eeeeEEEEecCCCCcEEEEEEE-ecCCcC-CeeeEeEEEeceeecCCCeeeecccccCC
Q 007000 114 VWMQHFNVPVAHSAAEVHFVVK-DNDFVG-SQIMGAVGIPVEKLCSGDKIEGAFPILNS 170 (622)
Q Consensus 114 vWNE~f~~~v~~~~~~L~l~V~-D~d~~~-dd~IG~~~i~L~~l~~g~~~~~W~~L~~~ 170 (622)
+|||+|.|.+......|.|+|| |++..+ +++||++.|+|+++..+...+.|++|...
T Consensus 82 ~wne~f~f~v~~~~~~L~~~V~~d~d~~~~d~~iG~~~i~l~~l~~~~~~~~W~~L~~~ 140 (171)
T 2q3x_A 82 LYQQSLVFDESPQGKVLQVIVWGDYGRMDHKCFMGVAQILLEELDLSSMVIGWYKLFPP 140 (171)
T ss_dssp EEEEEEECSSCCTTEEEEEEEEEECSTTCSSEEEEEEEECGGGSCTTSCEEEEEECBCG
T ss_pred CCCcEEEEEecCCCCEEEEEEEEcCCCCCCCCEEEEEEEEHHHcccCCCcceeEECCCc
Confidence 9999999999766789999999 999887 79999999999999877788999999654
No 28
>1w15_A Synaptotagmin IV; metal binding protein, endocytosis/exocytosis neurotransmitter release, transmembrane; 1.93A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1w16_A
Probab=99.71 E-value=1.7e-17 Score=155.01 Aligned_cols=111 Identities=22% Similarity=0.281 Sum_probs=87.6
Q ss_pred eeEeeceEEEEEEEEeecCCCCCccccccccccccccccccccccccCCCCCCCCcEEEEEE--CCEE--EeeeeeecCC
Q 007000 35 KVLLLHGNLDIWVKEAKNLPNMDMFHKKIGDVFGKLNVKVTSKIESHLSDKITSDPYVTVSI--CGAV--IGRTFVISNS 110 (622)
Q Consensus 35 ~~~~~~g~L~v~V~~A~~L~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~DPYv~V~l--~~~~--~~kT~vi~~t 110 (622)
+.....+.|.|+|++|++|+.+|. .|++||||+|.+ ++.. ..||++++++
T Consensus 24 ~y~~~~~~L~v~v~~a~~L~~~d~--------------------------~g~~dpyv~v~~~~~~~~~~~~kT~v~~~t 77 (153)
T 1w15_A 24 CYQSTTNTLTVVVLKARHLPKSDV--------------------------SGLSDPYVKVNLYHAKKRISKKKTHVKKCT 77 (153)
T ss_dssp EEETTTTEEEEEEEEEESCC--------------------------------CCCEEEEEEEEETTEEEEEEECCCCCSC
T ss_pred EEcCCCCEEEEEEEEeECCCCcCC--------------------------CCCCCeEEEEEEEeCCeEeceEecCcccCC
Confidence 334456799999999999998775 466899999999 4442 4499999999
Q ss_pred CCCeeeeEEEEecCCCC---cEEEEEEEecCCcC-CeeeEeEEEeceeecCCCeeeecccccCCCCC
Q 007000 111 ESPVWMQHFNVPVAHSA---AEVHFVVKDNDFVG-SQIMGAVGIPVEKLCSGDKIEGAFPILNSSRK 173 (622)
Q Consensus 111 ~nPvWNE~f~~~v~~~~---~~L~l~V~D~d~~~-dd~IG~~~i~L~~l~~g~~~~~W~~L~~~~g~ 173 (622)
+||+|||+|.|.+.... ..|.|+|||++.++ +++||++.|+|++ .+...++|++|....++
T Consensus 78 ~nP~wne~f~f~v~~~~l~~~~l~v~V~d~d~~~~~~~lG~~~i~l~~--~~~~~~~W~~l~~~p~~ 142 (153)
T 1w15_A 78 PNAVFNELFVFDIPCESLEEISVEFLVLDSERGSRNEVIGRLVLGATA--EGSGGGHWKEICDFPRR 142 (153)
T ss_dssp SSEEEEEEEEEECCSSSSTTEEEEEEEEECCTTSCCEEEEEEEESTTC--CSHHHHHHHHHHHSTTC
T ss_pred CCCeecceEEEECCHHHhCceEEEEEEEeCCCCCCCcEEEEEEECCCC--CchHHHHHHHHHhCCCC
Confidence 99999999999986542 67999999999887 8999999999987 35557889999876554
No 29
>2chd_A Rabphilin-3A, exophilin-1; C2 domain, C2A, calcium binding, synaptic EXOC metal-binding, protein transport, synapse, transport, zinc-; 1.92A {Rattus norvegicus} PDB: 2k3h_A
Probab=99.71 E-value=2.8e-17 Score=151.47 Aligned_cols=105 Identities=23% Similarity=0.343 Sum_probs=90.0
Q ss_pred eceEEEEEEEEeecCCCCCccccccccccccccccccccccccCCCCCCCCcEEEEEECC----EEEeeeeeecCCCCCe
Q 007000 39 LHGNLDIWVKEAKNLPNMDMFHKKIGDVFGKLNVKVTSKIESHLSDKITSDPYVTVSICG----AVIGRTFVISNSESPV 114 (622)
Q Consensus 39 ~~g~L~v~V~~A~~L~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~DPYv~V~l~~----~~~~kT~vi~~t~nPv 114 (622)
..+.|+|+|++|++|+.+|. .|.+||||+|++.. ....||+++++++||+
T Consensus 27 ~~~~L~V~v~~a~~L~~~d~--------------------------~g~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~ 80 (142)
T 2chd_A 27 DNSNLQCTIIRAKGLKPMDS--------------------------NGLADPYVKLHLLPGASKSNKLRTKTLRNTRNPV 80 (142)
T ss_dssp GGTEEEEEEEEEESCCCCCT--------------------------TSCCCEEEEEEEESCCSGGGEEECCCCCSCSSCE
T ss_pred CCCEEEEEEEEecCCCCCCC--------------------------CCCCCCEEEEEEEcCCCCcceeeCCcCCCCCCCc
Confidence 56899999999999998875 56789999999964 2344999999999999
Q ss_pred eeeEEEEe-cCCC---CcEEEEEEEecCCcC-CeeeEeEEEeceeecCCCeeeecccccC
Q 007000 115 WMQHFNVP-VAHS---AAEVHFVVKDNDFVG-SQIMGAVGIPVEKLCSGDKIEGAFPILN 169 (622)
Q Consensus 115 WNE~f~~~-v~~~---~~~L~l~V~D~d~~~-dd~IG~~~i~L~~l~~g~~~~~W~~L~~ 169 (622)
|||+|.|. +... ...|.|+|||++..+ +++||++.++|+++..+.....|++|..
T Consensus 81 wne~f~f~~~~~~~~~~~~l~i~V~d~d~~~~d~~iG~~~i~l~~l~~~~~~~~~~~L~~ 140 (142)
T 2chd_A 81 WNETLQYHGITEEDMQRKTLRISVCDEDKFGHNEFIGETRFSLKKLKANQRKNFNICLER 140 (142)
T ss_dssp EEEEEEEESCCHHHHHHCEEEEEEEEECTTSCEEEEEEEEEEGGGCCTTCCEEEEEECBC
T ss_pred CcCEEEEcccCHHHccCCEEEEEEEECCCCCCCcEEEEEEEEHHHcCCCCccEEEEeccc
Confidence 99999998 5432 268999999999887 7899999999999998888888998854
No 30
>1v27_A Regulating synaptic membrane exocytosis protein 2; RAB3-interacting molecule, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.71 E-value=2e-17 Score=151.86 Aligned_cols=107 Identities=20% Similarity=0.252 Sum_probs=88.5
Q ss_pred eeceEEEEEEEEeecCCCCCccccccccccccccccccccccccCCCCCCCCcEEEEEEC----CEEEeeeeeecCCCCC
Q 007000 38 LLHGNLDIWVKEAKNLPNMDMFHKKIGDVFGKLNVKVTSKIESHLSDKITSDPYVTVSIC----GAVIGRTFVISNSESP 113 (622)
Q Consensus 38 ~~~g~L~v~V~~A~~L~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~DPYv~V~l~----~~~~~kT~vi~~t~nP 113 (622)
...+.|+|+|++|++|+.+|. .+.+||||+|++. .....||+++++++||
T Consensus 18 ~~~~~L~v~v~~a~~L~~~d~--------------------------~g~~dpyv~v~~~~~~~~~~~~kT~~~~~t~nP 71 (141)
T 1v27_A 18 KVGHQLIVTILGAKDLPSRED--------------------------GRPRNPYVKIYFLPDRSDKNKRRTKTVKKTLEP 71 (141)
T ss_dssp TTTTEEEEEEEEEESCCCCSS--------------------------SCCCCEEEECCCSSCCSSSSCCBCCCCSSCSSC
T ss_pred CCCCEEEEEEEEccCCCCcCC--------------------------CCCCCCEEEEEEecCCCCCcceeCccccCCCCC
Confidence 345799999999999998875 4678999999993 2334499999999999
Q ss_pred eeeeEEEEec-CCC---CcEEEEEEEecCCcC---CeeeEeEEEeceeecCCCeeeecccccCCC
Q 007000 114 VWMQHFNVPV-AHS---AAEVHFVVKDNDFVG---SQIMGAVGIPVEKLCSGDKIEGAFPILNSS 171 (622)
Q Consensus 114 vWNE~f~~~v-~~~---~~~L~l~V~D~d~~~---dd~IG~~~i~L~~l~~g~~~~~W~~L~~~~ 171 (622)
+|||+|.|.+ ... ...|.|+|||++..+ +++||++.++|.++.... .+.||+|....
T Consensus 72 ~wne~f~f~~~~~~~~~~~~l~i~V~d~d~~~~~~~~~lG~~~i~l~~l~~~~-~~~W~~L~~~~ 135 (141)
T 1v27_A 72 KWNQTFIYSPVHRREFRERMLEITLWDQARVREEESEFLGEILIELETALLDD-EPHWYKLQTHD 135 (141)
T ss_dssp CCCCCCEECSCCTTGGGTCEEEEEEEEBCSSSSCCBCCCEEEEEEGGGCCCSS-EEEEEECBCCS
T ss_pred ccccEEEEccCCHHHhcCCEEEEEEEECCCCcCCCCceEEEEEEEccccCCCC-CCceEECcccc
Confidence 9999999984 322 378999999999876 789999999999987544 78999997643
No 31
>2dmg_A KIAA1228 protein; beta-sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.71 E-value=3.1e-17 Score=151.17 Aligned_cols=106 Identities=20% Similarity=0.229 Sum_probs=88.8
Q ss_pred eceEEEEEEEEeecCCCCCccccccccccccccccccccccccCCCCCCCCcEEEEEECC--E--EEeeeeeecCCCCCe
Q 007000 39 LHGNLDIWVKEAKNLPNMDMFHKKIGDVFGKLNVKVTSKIESHLSDKITSDPYVTVSICG--A--VIGRTFVISNSESPV 114 (622)
Q Consensus 39 ~~g~L~v~V~~A~~L~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~DPYv~V~l~~--~--~~~kT~vi~~t~nPv 114 (622)
..+.|+|+|++|++|+.+|. .+ +||||+|++.. . ...||+++++++||+
T Consensus 22 ~~~~L~v~v~~a~~L~~~d~--------------------------~g-~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~ 74 (142)
T 2dmg_A 22 QRNKLIVVVHACRNLIAFSE--------------------------DG-SDPYVRMYLLPDKRRSGRRKTHVSKKTLNPV 74 (142)
T ss_dssp TTTEEEEEEEEEECCCCSST--------------------------TC-CCEEEEEEEESCCCSSSCEECCCCCSCSSCE
T ss_pred CCCEEEEEEEEeECCCCCCC--------------------------CC-CCeeEEEEEEcCCCCCCcccCCccCCCCCCC
Confidence 36799999999999998875 46 89999999942 1 334999999999999
Q ss_pred eeeEEEEecCCC---CcEEEEEEEecCCcC---CeeeEeEEEeceeecCCCeeeecccccCCC
Q 007000 115 WMQHFNVPVAHS---AAEVHFVVKDNDFVG---SQIMGAVGIPVEKLCSGDKIEGAFPILNSS 171 (622)
Q Consensus 115 WNE~f~~~v~~~---~~~L~l~V~D~d~~~---dd~IG~~~i~L~~l~~g~~~~~W~~L~~~~ 171 (622)
|||+|.|.+... ...|.|+|||++.++ +++||++.|+|+++..+...++|++|....
T Consensus 75 wne~f~f~v~~~~l~~~~L~i~V~d~d~~~~~~~~~iG~~~i~l~~~~~~~~~~~W~~L~~~~ 137 (142)
T 2dmg_A 75 FDQSFDFSVSLPEVQRRTLDVAVKNSGGFLSKDKGLLGKVLVALASEELAKGWTQWYDLTEDS 137 (142)
T ss_dssp EEEEEEECCCHHHHHHCEEEEEEEECCCSSCCSCCCCEEEEEECCCSTTTTCBCCBCCCBCSC
T ss_pred cCceEEEEecHHHhCcCEEEEEEEECCCccccCCcEEEEEEEecccccccccccceeeccCCC
Confidence 999999998643 258999999999764 369999999999998777788999997553
No 32
>3fbk_A RGS3, RGP3, regulator of G-protein signaling 3; all beta-sheet fold, structural genomics, PSI-2, protein structure initiative; 2.00A {Homo sapiens} SCOP: b.7.1.0
Probab=99.70 E-value=5.5e-17 Score=151.80 Aligned_cols=111 Identities=23% Similarity=0.341 Sum_probs=92.0
Q ss_pred cceeEeeceEEEEEEEEeecCCCCCccccccccccccccccccccccccCCCCCCCCcEEEEEECC----EEEeeeeeec
Q 007000 33 SLKVLLLHGNLDIWVKEAKNLPNMDMFHKKIGDVFGKLNVKVTSKIESHLSDKITSDPYVTVSICG----AVIGRTFVIS 108 (622)
Q Consensus 33 ~~~~~~~~g~L~v~V~~A~~L~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~DPYv~V~l~~----~~~~kT~vi~ 108 (622)
+|+.....+.|+|+|++|++|+.+| .+.+||||+|.+.. ....||++++
T Consensus 19 sL~y~~~~~~L~V~v~~a~~L~~~d---------------------------~g~~Dpyv~v~l~~~~~~~~~~kT~v~~ 71 (153)
T 3fbk_A 19 RLSIDAQDRVLLLHIIEGKGLISKQ---------------------------PGTCDPYVKISLIPEDSRLRHQKTQTVP 71 (153)
T ss_dssp EEEEEESSSEEEEEEEEEESCCCCS---------------------------SSCCCEEEEEEEESCSCCTTCEECCCCT
T ss_pred EEEEECCCCEEEEEEEEeeCCCCCC---------------------------CCCCCEEEEEEEEcCCCCccEEeccccC
Confidence 4666667799999999999999876 24589999999932 2234999999
Q ss_pred CCCCCeeeeEEEEec--CCCCcEEEEEEEecCCcC--CeeeEeEEEeceeecC-CCeeeecccccCC
Q 007000 109 NSESPVWMQHFNVPV--AHSAAEVHFVVKDNDFVG--SQIMGAVGIPVEKLCS-GDKIEGAFPILNS 170 (622)
Q Consensus 109 ~t~nPvWNE~f~~~v--~~~~~~L~l~V~D~d~~~--dd~IG~~~i~L~~l~~-g~~~~~W~~L~~~ 170 (622)
+++||+|||+|.|.+ ......|.|+|||++..+ +++||++.++|++|.. +...+.|++|...
T Consensus 72 ~t~nP~wne~f~f~v~~~~~~~~L~i~V~d~d~~~~~d~~lG~~~i~l~~l~~~~~~~~~W~~L~~~ 138 (153)
T 3fbk_A 72 DCRDPAFHEHFFFPVQEEDDQKRLLVTVWNRASQSRQSGLIGCMSFGVKSLLTPDKEISGWYYLLGE 138 (153)
T ss_dssp TCSSCEEEEEEEEECCGGGTTSEEEEEEEECCSSGGGCEEEEEEEEEHHHHTC--CCEEEEEECBCT
T ss_pred CCCCCccccEEEEecccHHhCCEEEEEEEeCCCCCCCCcEEEEEEEEHHHhcCCCCccccEEECCCh
Confidence 999999999999998 334467999999999864 7899999999999984 6778899999764
No 33
>1xdp_A Polyphosphate kinase; PPK, PPK complex with AMPPNP, AMPPNP, transferase; HET: ATP; 2.50A {Escherichia coli} SCOP: a.7.15.1 d.322.1.2 d.136.1.4 d.136.1.4 PDB: 1xdo_A*
Probab=99.70 E-value=1e-16 Score=182.37 Aligned_cols=197 Identities=13% Similarity=0.080 Sum_probs=141.6
Q ss_pred HHHHHHHHHHhccc-----EEEEEEEeecceeeEEeCCCCchhHHHHHHhhhcCCCeEEEEEeCCCcccccccccccCcc
Q 007000 251 CWQDVYDAINQARR-----LIYITGWSVYHTVRLVRDGSNTLMLGDLLKIKSQEGVRVLILAWDDPTSRSILGYKTDGIM 325 (622)
Q Consensus 251 ~f~~l~~aI~~Ar~-----~I~I~~y~~~p~~~i~~~~~~g~~l~~~L~~aa~rGV~VriLv~D~~gs~~~~~~~~~~~~ 325 (622)
.|+.+++.|++|++ +|+|+.| ++.+ +..+.++|++||+|||+|+||+ |..+.+..
T Consensus 348 sf~~v~~~I~~A~~dp~v~~I~it~Y-------~~~~---d~~I~~AL~~AA~rGV~VrVLv-d~~a~~~~--------- 407 (687)
T 1xdp_A 348 TFEHVLELLRQASFDPSVLAIKINIY-------RVAK---DSRIIDSMIHAAHNGKKVTVVV-ELQARFDE--------- 407 (687)
T ss_dssp CTHHHHHHHHHHHHCTTEEEEEEEES-------SCCT---TCHHHHHHHHHHHTTCEEEEEE-CTTCSSTT---------
T ss_pred hhhhHHHHHHHHhhCCcceEEEEEee-------eecC---cHHHHHHHHHHHhcCCEEEEEE-CCCcccch---------
Confidence 68999999999997 9999888 4422 2889999999999999999996 87763211
Q ss_pred CCChHHHHhhhcCCCeEEEecCCCCCCCcccccccccccccccccceEEEccCCccCcceeE---EEEcccccCCcccCC
Q 007000 326 STNDEETRRFFKHSSVQVLLCPRSAGKGHSFVKKQEVGTIYTHHQKTVVVDADAGQFKRKII---AFVGGLDLCKGRYDT 402 (622)
Q Consensus 326 ~~~~~~~~~~l~~~gv~v~~~~~~~~~~~~~~~~~~~~~~~r~HrK~vVIDg~~~~~~~~~v---afvGG~Ni~~~~~d~ 402 (622)
..+..+.+.|.++||+|.++.+ .+++|+|++|||++..+ ++ +|+||.|+....+
T Consensus 408 -~~n~~~~~~L~~aGV~V~~~~~----------------~~k~H~Ki~VID~re~~----~i~~~a~iGS~N~d~rs~-- 464 (687)
T 1xdp_A 408 -EANIHWAKRLTEAGVHVIFSAP----------------GLKIHAKLFLISRKENG----EVVRYAHIGTGNFNEKTA-- 464 (687)
T ss_dssp -TTTTTTTHHHHHHTCEEEECCT----------------TCEECCEEEEEEEEETT----EEEEEEEEESSCSCTTGG--
T ss_pred -hhHHHHHHHHHHCCCEEEEecC----------------CccccceEEEEEeccCC----eEEEEEEEeCCcCCcchh--
Confidence 1112455667889999987532 24699999999941111 56 9999999976433
Q ss_pred CCCCCccccccccCCCCCCCCCCCCCCCCCCCCceeeeeEEeCh-HHHHHHHHHHHHHhhccCCCCcccccCCCccchhh
Q 007000 403 PAHPLFKTLETVHKDDYYNPSLLEPIAGGPREPWHDLHCRIDGP-AAYDILTNFEERWLKASKPHGLQKLKSSNDDSLLK 481 (622)
Q Consensus 403 ~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~D~~~ri~Gp-av~dl~~~F~~~W~~~~~~~~~~~~~~~~~~~~~~ 481 (622)
..|+|+++++.|| ++.++...|...|....... +
T Consensus 465 -------------------------------~~n~D~~l~i~~~~i~~~l~~~F~~~~~~s~~~~----~---------- 499 (687)
T 1xdp_A 465 -------------------------------RLYTDYSLLTADARITNEVRRVFNFIENPYRPVT----F---------- 499 (687)
T ss_dssp -------------------------------GTEEEEEEEECCHHHHHHHHHHHHHHHCTTSCCC----C----------
T ss_pred -------------------------------hhcceEEEEEeCHHHHHHHHHHHHHHHhhccccc----h----------
Confidence 2479999999986 59999999999998643211 0
Q ss_pred cccCcccccCccccCCCCCCCCcccceEeeeccccccCCCCCCCcccccccccccccccchhHHHHHHHHHHHHccc---
Q 007000 482 LERIPEIVGMTEASYLSENDPEAWHAQVFRSIDSNSVKGFPVEPRDATSMNLVCGKNVLIDMSIHTAYVKAIRAAQH--- 558 (622)
Q Consensus 482 ~~~~p~~~~~~~~~~~~~~~~~~~~vqv~rs~~~~~~~~~~~~P~~~~~~~~~~~~~~~~e~~I~~ay~~aI~~A~~--- 558 (622)
. +++.+ |.. ....+...+...|..|++
T Consensus 500 ----~---------------------~l~~s------------P~~-------------~~~~l~~~I~~ei~~A~~g~~ 529 (687)
T 1xdp_A 500 ----D---------------------YLMVS------------PQN-------------SRRLLYEMVDREIANAQQGLP 529 (687)
T ss_dssp ----S---------------------SCEEE------------TTS-------------HHHHHHHHHHHHHHHHHTTCC
T ss_pred ----h---------------------heeeC------------Cch-------------hhHHHHHHHHHHHHHHHcCCC
Confidence 0 00101 110 023455566667888887
Q ss_pred -eEEEEeccccccccCcccc-----cCcCCcccC
Q 007000 559 -FIYIENQYFLGSSFNWDSH-----RDLGESICD 586 (622)
Q Consensus 559 -~IyIenqYFip~~~~~~~~-----~~~~~~~~~ 586 (622)
+|+|.++| +|++.+.++| +++.+++++
T Consensus 530 ~~I~i~~~~-lpD~~ii~AL~~Aa~rGV~VrLiv 562 (687)
T 1xdp_A 530 SGITLKLNN-LVDKGLVDRLYAASSSGVPVNLLV 562 (687)
T ss_dssp CCEEEEESC-BCCHHHHHHHHHHHHTTCCEEEEE
T ss_pred CEEEEEeCC-CCCHHHHHHHHHHHHCCCEEEEEE
Confidence 89999998 6887776655 777788888
No 34
>2o8r_A Polyphosphate kinase; structural genomics, protein structure initiative, PSI, nysgrc, NEW YORK structural genomics research consortium; HET: MSE; 2.70A {Porphyromonas gingivalis} SCOP: a.7.15.1 d.322.1.2 d.136.1.4 d.136.1.4
Probab=99.70 E-value=2e-17 Score=187.01 Aligned_cols=200 Identities=13% Similarity=0.117 Sum_probs=141.4
Q ss_pred HHHHHHHHHHhccc-----EEEEEEEeecceeeEEeCCCCchhHHHHHHhhhcCCCeEEEEEeCCCcccccccccccCcc
Q 007000 251 CWQDVYDAINQARR-----LIYITGWSVYHTVRLVRDGSNTLMLGDLLKIKSQEGVRVLILAWDDPTSRSILGYKTDGIM 325 (622)
Q Consensus 251 ~f~~l~~aI~~Ar~-----~I~I~~y~~~p~~~i~~~~~~g~~l~~~L~~aa~rGV~VriLv~D~~gs~~~~~~~~~~~~ 325 (622)
.|+.++++|++|++ +|.++.| ++.++ ..|.++|++||++||+|++|+ | .+++...
T Consensus 353 sf~~vi~~I~~A~~DP~V~sIk~tlY-------r~~~d---s~Iv~ALi~AA~rGv~V~vLv-e-l~arfde-------- 412 (705)
T 2o8r_A 353 TYDYVVRLLMEAAISPDVSEIRLTQY-------RVAEN---SSIISALEAAAQSGKKVSVFV-E-LKARFDE-------- 412 (705)
T ss_dssp CSHHHHHHHHHHHTCTTEEEEEEEES-------CCCSC---CHHHHHHHHHHHTTCEEEEEE-C-CCSCC----------
T ss_pred hHHHHHHHHHHhccCCCceEEEEEEE-------EEcCC---HHHHHHHHHHHHCCCEEEEEE-e-CCCCcch--------
Confidence 79999999999998 9999999 55443 899999999999999999996 8 6653221
Q ss_pred CCChHHHHhhhcCCCeEEEecCCCCCCCcccccccccccccccccceEEEccC--CccCcceeEEEEcccccCCcccCCC
Q 007000 326 STNDEETRRFFKHSSVQVLLCPRSAGKGHSFVKKQEVGTIYTHHQKTVVVDAD--AGQFKRKIIAFVGGLDLCKGRYDTP 403 (622)
Q Consensus 326 ~~~~~~~~~~l~~~gv~v~~~~~~~~~~~~~~~~~~~~~~~r~HrK~vVIDg~--~~~~~~~~vafvGG~Ni~~~~~d~~ 403 (622)
..+..+.+.|+++||+|.+. . .++++|+|++|||+. .+++ =.+.+++|.-|+.+.
T Consensus 413 -e~ni~wa~~Le~aGv~Vv~g--~--------------~~lk~H~Ki~lIdrr~~~~g~-~~~y~~igtGN~n~~----- 469 (705)
T 2o8r_A 413 -ENNLRLSERMRRSGIRIVYS--M--------------PGLKVHAKTALILYHTPAGER-PQGIALLSTGNFNET----- 469 (705)
T ss_dssp ---CHHHHHHHHHHTCEEEEC--C--------------TTCCBCCCEEEEEECCCSSSC-CCEEEEEESSCSSCC-----
T ss_pred -hhhHHHHHHHHHCCCEEEEc--c--------------CCCCceeEEEEEecccccCCc-eeEEEeccccceeee-----
Confidence 12346788899999999772 1 247899999999994 2211 112344443333321
Q ss_pred CCCCccccccccCCCCCCCCCCCCCCCCCCCCceeeeeEEeCh-HHHHHHHHHHHHHhhccCCCCcccccCCCccchhhc
Q 007000 404 AHPLFKTLETVHKDDYYNPSLLEPIAGGPREPWHDLHCRIDGP-AAYDILTNFEERWLKASKPHGLQKLKSSNDDSLLKL 482 (622)
Q Consensus 404 ~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~D~~~ri~Gp-av~dl~~~F~~~W~~~~~~~~~~~~~~~~~~~~~~~ 482 (622)
...-|.|+++...+| ++.++...|...|......
T Consensus 470 ----------------------------tariy~D~~l~t~~~~i~~dl~~vF~~~tg~~~~~----------------- 504 (705)
T 2o8r_A 470 ----------------------------TARIYSDTTLMTANTDIVHDVYRLFRILDGDPEPA----------------- 504 (705)
T ss_dssp ----------------------------CSSCEEEEEEEECCHHHHHHHHHHHHHHTTCCCCS-----------------
T ss_pred ----------------------------EEEEEeeeeeeecChHHHHHHHHHHHHHhCCCCCC-----------------
Confidence 122478999999885 5799999997666421000
Q ss_pred ccCcccccCccccCCCCCCCCcccceEeeeccccccCCCCCCCcccccccccccccccchhHHHHHHHHHHHHccc----
Q 007000 483 ERIPEIVGMTEASYLSENDPEAWHAQVFRSIDSNSVKGFPVEPRDATSMNLVCGKNVLIDMSIHTAYVKAIRAAQH---- 558 (622)
Q Consensus 483 ~~~p~~~~~~~~~~~~~~~~~~~~vqv~rs~~~~~~~~~~~~P~~~~~~~~~~~~~~~~e~~I~~ay~~aI~~A~~---- 558 (622)
. ..|++.+ |.. ....|.+.+..+|.+|++
T Consensus 505 ---------------------~-~~~l~~s------------P~~-------------~~~~i~~~i~~eI~~Ak~G~~a 537 (705)
T 2o8r_A 505 ---------------------R-FSRLLVA------------RYN-------------MGEAITNLIEREIENVKRGKRG 537 (705)
T ss_dssp ---------------------C-CSSCEET------------TTT-------------HHHHHHHHHHHHHHHHHTTCCC
T ss_pred ---------------------C-ceEEEEC------------Cch-------------HHHHHHHHHHHHHHHHhcCCCC
Confidence 0 0233331 221 135799999999999999
Q ss_pred eEEEEeccccccccCcccc-----cCcCCcccC
Q 007000 559 FIYIENQYFLGSSFNWDSH-----RDLGESICD 586 (622)
Q Consensus 559 ~IyIenqYFip~~~~~~~~-----~~~~~~~~~ 586 (622)
+|+|.+|| +|++.+.++| +++.+++++
T Consensus 538 ~I~ik~n~-l~D~~ii~aL~~As~~GV~V~LIV 569 (705)
T 2o8r_A 538 YMLLKMNG-LQDKNVITQLYRASEAGVEIDLIV 569 (705)
T ss_dssp EEEEEESC-BCCHHHHHHHHHHHHTTCEEEEEE
T ss_pred EEEEEcCC-CCCHHHHHHHHHHHHCCCeEEEEE
Confidence 99999999 8888777765 666677777
No 35
>3n5a_A Synaptotagmin-7; calcium/phospholipid binding protein, protein transport; 1.44A {Mus musculus}
Probab=99.69 E-value=2.2e-17 Score=150.89 Aligned_cols=108 Identities=19% Similarity=0.314 Sum_probs=90.0
Q ss_pred eceEEEEEEEEeecCCCCCccccccccccccccccccccccccCCCCCCCCcEEEEEECC----EEEeeeeeecCCCCCe
Q 007000 39 LHGNLDIWVKEAKNLPNMDMFHKKIGDVFGKLNVKVTSKIESHLSDKITSDPYVTVSICG----AVIGRTFVISNSESPV 114 (622)
Q Consensus 39 ~~g~L~v~V~~A~~L~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~DPYv~V~l~~----~~~~kT~vi~~t~nPv 114 (622)
..+.|+|+|++|++|+.+|. .|.+||||+|.+.. ....||++++++.||+
T Consensus 14 ~~~~L~v~v~~a~~L~~~d~--------------------------~g~~dpyv~v~~~~~~~~~~~~kT~~~~~t~nP~ 67 (138)
T 3n5a_A 14 SANSIIVNIIKARNLKAMDI--------------------------GGTSDPYVKVWLMYKDKRVEKKKTVTKKRNLNPI 67 (138)
T ss_dssp TTTEEEEEEEEEESCCCCBT--------------------------TTBCCEEEEEEEEETTEEEEEEECCCCSSCSSCE
T ss_pred CCCeEEEEEEEeeCCCCcCC--------------------------CCCcCeEEEEEEEeCCCccceEeCccccCCCCCc
Confidence 45899999999999998775 45689999999963 2345999999999999
Q ss_pred eeeEEEEecCCCC---cEEEEEEEecCCcC-CeeeEeEEEeceeecCCCeeeecccccCCCCCc
Q 007000 115 WMQHFNVPVAHSA---AEVHFVVKDNDFVG-SQIMGAVGIPVEKLCSGDKIEGAFPILNSSRKP 174 (622)
Q Consensus 115 WNE~f~~~v~~~~---~~L~l~V~D~d~~~-dd~IG~~~i~L~~l~~g~~~~~W~~L~~~~g~~ 174 (622)
|||+|.|.+.... ..|.|+|||++..+ +++||++.++|.++ +...++|++|....+++
T Consensus 68 wne~f~f~v~~~~l~~~~l~~~V~d~~~~~~~~~lG~~~i~l~~~--~~~~~~W~~l~~~~~~~ 129 (138)
T 3n5a_A 68 FNESFAFDIPTEKLRETTIIITVMDKDKLSRNDVIGKIYLSWKSG--PGEVKHWKDMIARPRQP 129 (138)
T ss_dssp EEEEEEEECCGGGGGGEEEEEEEEECCSSSCCEEEEEEEESSSSC--HHHHHHHHHHHHSTTCC
T ss_pred CcceEEEECChhhcCceEEEEEEEECCCCCCCcEEEEEEEccccC--ChHHHHHHHHHhCCCCe
Confidence 9999999986543 67999999999887 89999999999864 34467899998766653
No 36
>2enp_A B/K protein; C2 type 1,beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.69 E-value=3.9e-17 Score=151.47 Aligned_cols=114 Identities=21% Similarity=0.259 Sum_probs=90.0
Q ss_pred eEeeceEEEEEEEEeecCCCC-CccccccccccccccccccccccccCCCCCCCCcEEEEEECC--EEEeeeeeecCCCC
Q 007000 36 VLLLHGNLDIWVKEAKNLPNM-DMFHKKIGDVFGKLNVKVTSKIESHLSDKITSDPYVTVSICG--AVIGRTFVISNSES 112 (622)
Q Consensus 36 ~~~~~g~L~v~V~~A~~L~~~-d~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~DPYv~V~l~~--~~~~kT~vi~~t~n 112 (622)
.....+.|+|+|++|++|+.+ |... ..+..+.+||||+|.+.. ....||+++++++|
T Consensus 21 y~~~~~~L~V~v~~a~~L~~~~d~~g--------------------~~~~~~~~dpyv~v~l~~~~~~~~kT~v~~~t~n 80 (147)
T 2enp_A 21 YDLLHNHLTVRVIEARDLPPPISHDG--------------------SRQDMAHSNPYVKICLLPDQKNSKQTGVKRKTQK 80 (147)
T ss_dssp EETTTTEEEEEEEEEECCCCSCSSCC--------------------SSCTTCCCCCEEEEEEETCCSSCEECCCCCSCSS
T ss_pred EcCCCCEEEEEEEEEeCCCCcccccc--------------------ccccCCCCCcEEEEEEEeCCCcceEeecccCCCC
Confidence 334567999999999999973 4310 001135789999999962 23449999999999
Q ss_pred CeeeeEEEEecCCC---CcEEEEEEEecCCcC-CeeeEeEEEeceeecCCCeeeecccccC
Q 007000 113 PVWMQHFNVPVAHS---AAEVHFVVKDNDFVG-SQIMGAVGIPVEKLCSGDKIEGAFPILN 169 (622)
Q Consensus 113 PvWNE~f~~~v~~~---~~~L~l~V~D~d~~~-dd~IG~~~i~L~~l~~g~~~~~W~~L~~ 169 (622)
|+|||+|.|.+... ...|.|+|||++.++ +++||++.|+|.++..+.....|++|..
T Consensus 81 P~wne~f~f~v~~~~l~~~~L~~~V~d~d~~~~~~~iG~~~i~l~~l~~~~~~~~w~~L~~ 141 (147)
T 2enp_A 81 PVFEERYTFEIPFLEAQRRTLLLTVVDFDKFSRHCVIGKVSVPLCEVDLVKGGHWWKALIP 141 (147)
T ss_dssp CCCCBCCEECCCHHHHHHSEEEEEEECCSTTCCSCCCEEEEEETTTSCTTTCCCEEECCBC
T ss_pred CeEeeeEEEEeChHHhccCEEEEEEEECCCCcCCcEEEEEEEechhcCCCCCccEEEEeec
Confidence 99999999998643 258999999999887 8899999999999987666788999964
No 37
>1tjx_A Similar to synaptotagmini/P65; C2B domain, calcium binding, endocytosis-EX complex; HET: GOL; 1.04A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1tjm_A* 1uov_A 1uow_A 1k5w_A 2lha_A*
Probab=99.69 E-value=1.4e-16 Score=149.90 Aligned_cols=96 Identities=28% Similarity=0.405 Sum_probs=80.3
Q ss_pred ceeEeeceEEEEEEEEeecCCCCCccccccccccccccccccccccccCCCCCCCCcEEEEEECC--E--EEeeeeeecC
Q 007000 34 LKVLLLHGNLDIWVKEAKNLPNMDMFHKKIGDVFGKLNVKVTSKIESHLSDKITSDPYVTVSICG--A--VIGRTFVISN 109 (622)
Q Consensus 34 ~~~~~~~g~L~v~V~~A~~L~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~DPYv~V~l~~--~--~~~kT~vi~~ 109 (622)
++.....+.|+|+|++|++|+.+|. .|.+||||+|++.. . ...||+++++
T Consensus 18 l~y~~~~~~L~V~v~~a~~L~~~d~--------------------------~g~~dpyv~v~l~~~~~~~~~~kT~v~~~ 71 (159)
T 1tjx_A 18 LRYVPTAGKLTVVILEAKNLKKMDV--------------------------GGLSDPYVKIHLMQNGKRLKKKKTTIKKN 71 (159)
T ss_dssp EEEETTTTEEEEEEEEEESCCCCST--------------------------TSCCCEEEEEEEEETTEEEEEEECCCCCS
T ss_pred EEEcCCCCEEEEEEEEeeCCCCccC--------------------------CCCCCeEEEEEEEeCCceeceeeCceecC
Confidence 3344456899999999999998875 46789999999952 2 3459999999
Q ss_pred CCCCeeeeEEEEecCCC---CcEEEEEEEecCCcC-CeeeEeEEEeceee
Q 007000 110 SESPVWMQHFNVPVAHS---AAEVHFVVKDNDFVG-SQIMGAVGIPVEKL 155 (622)
Q Consensus 110 t~nPvWNE~f~~~v~~~---~~~L~l~V~D~d~~~-dd~IG~~~i~L~~l 155 (622)
++||+|||+|.|.+... ...|.|+|||++.++ +++||++.|++..+
T Consensus 72 t~nP~wne~f~f~v~~~~l~~~~l~i~V~d~d~~~~~~~iG~~~i~l~~~ 121 (159)
T 1tjx_A 72 TLNPYYNESFSFEVPFEQIQKVQVVVTVLDYDKIGKNDAIGKVFVGYNST 121 (159)
T ss_dssp CSSCEEEEEEEEECCGGGGGGCEEEEEEEECCSSSCCEEEEEEEEETTCC
T ss_pred CCCCcccceEEEEcCHHHhCCcEEEEEEEECCCCCCCceEEEEEECCCCC
Confidence 99999999999998643 257999999999887 89999999999864
No 38
>1byr_A Protein (endonuclease); phosphodiesterase,; 2.00A {Salmonella typhimurium} SCOP: d.136.1.1 PDB: 1bys_A
Probab=99.69 E-value=1.8e-16 Score=148.06 Aligned_cols=132 Identities=18% Similarity=0.233 Sum_probs=105.6
Q ss_pred HHHHHHHHHHhcccEEEEEEEeecceeeEEeCCCCchhHHHHHHhhhcCCCeEEEEEeCCCcccccccccccCccCCChH
Q 007000 251 CWQDVYDAINQARRLIYITGWSVYHTVRLVRDGSNTLMLGDLLKIKSQEGVRVLILAWDDPTSRSILGYKTDGIMSTNDE 330 (622)
Q Consensus 251 ~f~~l~~aI~~Ar~~I~I~~y~~~p~~~i~~~~~~g~~l~~~L~~aa~rGV~VriLv~D~~gs~~~~~~~~~~~~~~~~~ 330 (622)
+++.+.++|++|+++|+|++|.| .+ ..+.++|.+|++|||+||||+ |..+.... ...
T Consensus 15 ~~~~~~~~i~~A~~~I~i~~~~~-------~~----~~i~~aL~~a~~rGV~Vril~-~~~~~~~~-----------~~~ 71 (155)
T 1byr_A 15 ARVLVLSAIDSAKTSIRMMAYSF-------TA----PDIMKALVAAKKRGVDVKIVI-DERGNTGR-----------ASI 71 (155)
T ss_dssp HHHHHHHHHHHCSSEEEEEESSB-------CC----HHHHHHHHHHHHTTCEEEEEE-ESTTCCSH-----------HHH
T ss_pred HHHHHHHHHHHHhhEEEEEEEEe-------CC----HHHHHHHHHHHHCCCEEEEEE-eCcccccc-----------ccH
Confidence 79999999999999999999943 22 689999999999999999996 76553210 113
Q ss_pred HHHhhhcCCCeEEEecCCCCCCCcccccccccccccccccceEEEccCCccCcceeEEEEcccccCCcccCCCCCCCccc
Q 007000 331 ETRRFFKHSSVQVLLCPRSAGKGHSFVKKQEVGTIYTHHQKTVVVDADAGQFKRKIIAFVGGLDLCKGRYDTPAHPLFKT 410 (622)
Q Consensus 331 ~~~~~l~~~gv~v~~~~~~~~~~~~~~~~~~~~~~~r~HrK~vVIDg~~~~~~~~~vafvGG~Ni~~~~~d~~~H~~~~~ 410 (622)
...+.|.++|++++.+.+. .++|+|++|||+ +++++||+|++...+
T Consensus 72 ~~~~~L~~~gv~v~~~~~~----------------~~~H~K~~iiD~--------~~~~iGS~N~~~~~~---------- 117 (155)
T 1byr_A 72 AAMNYIANSGIPLRTDSNF----------------PIQHDKVIIVDN--------VTVETGSFNFTKAAE---------- 117 (155)
T ss_dssp HHHHHHHHTTCCEEEECSS----------------SCCCCCEEEETT--------TEEEEESCCBSHHHH----------
T ss_pred HHHHHHHHCCCeEEEcCCc----------------ccccceEEEECC--------CEEEEECCCCCcccc----------
Confidence 4566677899998875321 358999999999 899999999986432
Q ss_pred cccccCCCCCCCCCCCCCCCCCCCCceeeeeEEeCh--HHHHHHHHHHHHHhhc
Q 007000 411 LETVHKDDYYNPSLLEPIAGGPREPWHDLHCRIDGP--AAYDILTNFEERWLKA 462 (622)
Q Consensus 411 ~~~~~~~~~~~~~~~~~~~~~~~~~w~D~~~ri~Gp--av~dl~~~F~~~W~~~ 462 (622)
..+++.++.+.|+ .+.++...|.+.|+.+
T Consensus 118 -----------------------~~n~E~~~~i~~~~~l~~~~~~~f~~~w~~~ 148 (155)
T 1byr_A 118 -----------------------TKNSENAVVIWNMPKLAESFLEHWQDRWNQG 148 (155)
T ss_dssp -----------------------HTSCEEEEEEESCHHHHHHHHHHHHHHHHTC
T ss_pred -----------------------ccCcccEEEEcCcHHHHHHHHHHHHHHHHhC
Confidence 2357899999994 7999999999999864
No 39
>2cm5_A Rabphilin-3A; protein transport, zinc-finger, Ca2+ binding, metal-binding, synaptic exocytosis, C2A-C2B linker fragment, C2B, zinc, synapse; 1.28A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 2cm6_A 3rpb_A
Probab=99.68 E-value=4.8e-17 Score=154.23 Aligned_cols=111 Identities=18% Similarity=0.251 Sum_probs=91.1
Q ss_pred eeEeeceEEEEEEEEeecCCCCCccccccccccccccccccccccccCCCCCCCCcEEEEEECC----EEEeeeeeecCC
Q 007000 35 KVLLLHGNLDIWVKEAKNLPNMDMFHKKIGDVFGKLNVKVTSKIESHLSDKITSDPYVTVSICG----AVIGRTFVISNS 110 (622)
Q Consensus 35 ~~~~~~g~L~v~V~~A~~L~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~DPYv~V~l~~----~~~~kT~vi~~t 110 (622)
+.....+.|+|+|++|++|+.+|. .|.+||||+|++.. ....||++++++
T Consensus 31 ~y~~~~~~L~V~v~~a~~L~~~d~--------------------------~g~~DPyv~v~l~~~~~~~~~~kT~v~~~t 84 (166)
T 2cm5_A 31 MYSTQQGGLIVGIIRCVHLAAMDA--------------------------NGYSDPFVKLWLKPDMGKKAKHKTQIKKKT 84 (166)
T ss_dssp EEETTTTEEEEEEEEEESCCCCST--------------------------TSCCCEEEEEEEETC---CCEEECCCCCSC
T ss_pred EEECCCCEEEEEEEEeECCCCccC--------------------------CCCCCcEEEEEEECCCCccceEeCCcccCC
Confidence 333356899999999999998875 56799999999975 234599999999
Q ss_pred CCCeeeeEEEEecCCC---CcEEEEEEEecCCcC-CeeeEeEEEeceeecCCCeeeecccccCCCCC
Q 007000 111 ESPVWMQHFNVPVAHS---AAEVHFVVKDNDFVG-SQIMGAVGIPVEKLCSGDKIEGAFPILNSSRK 173 (622)
Q Consensus 111 ~nPvWNE~f~~~v~~~---~~~L~l~V~D~d~~~-dd~IG~~~i~L~~l~~g~~~~~W~~L~~~~g~ 173 (622)
+||+|||+|.|.+... ...|.|+|||++..+ +++||++.|+|.++. ...++|++|....++
T Consensus 85 ~nP~wne~f~f~v~~~~l~~~~L~i~V~d~d~~~~~~~iG~~~i~l~~~~--~~~~~W~~l~~~~~~ 149 (166)
T 2cm5_A 85 LNPEFNEEFFYDIKHSDLAKKSLDISVWDYDIGKSNDYIGGCQLGISAKG--ERLKHWYECLKNKDK 149 (166)
T ss_dssp SSCEEEEEEEEECCGGGGGGCEEEEEEEECCSSSCCEEEEEEEEETTCCH--HHHHHHHHHHHCTTC
T ss_pred CCCcccceEEEEcchHhcCCCEEEEEEEECCCCCCCcEEEeEEEecccCC--chhHHHHHHHhCCCC
Confidence 9999999999998643 358999999999887 899999999998763 346789998765544
No 40
>1ugk_A Synaptotagmin IV, KIAA1342; beta sandwich, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.68 E-value=1.3e-16 Score=146.39 Aligned_cols=108 Identities=24% Similarity=0.361 Sum_probs=87.9
Q ss_pred EeeceEEEEEEEEeecCCCCCccccccccccccccccccccccccCCCCCCCCcEEEEEECC--EEEeeeeeecCCCCCe
Q 007000 37 LLLHGNLDIWVKEAKNLPNMDMFHKKIGDVFGKLNVKVTSKIESHLSDKITSDPYVTVSICG--AVIGRTFVISNSESPV 114 (622)
Q Consensus 37 ~~~~g~L~v~V~~A~~L~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~DPYv~V~l~~--~~~~kT~vi~~t~nPv 114 (622)
....+.|.|+|++|++|+.+|.. ++.+||||+|.+.. ....||+++++++||+
T Consensus 18 ~~~~~~L~v~v~~a~~L~~~d~~-------------------------~~~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~ 72 (138)
T 1ugk_A 18 NFERKAFVVNIKEARGLPAMDEQ-------------------------SMTSDPYIKMTILPEKKHKVKTRVLRKTLDPA 72 (138)
T ss_dssp EGGGTEEEEEEEEEESCCCCBTT-------------------------TTBCEEEEEEEEETTTCSEEECCCCSSCSSCE
T ss_pred ECCCCEEEEEEEEeeCCCCCCCC-------------------------CCCCCCEEEEEEecCCCceEecCcCcCCCCCc
Confidence 33568999999999999987741 25689999999952 3345999999999999
Q ss_pred eeeEEEEe-cCCC---CcEEEEEEEecCCcC-CeeeEeEEEeceeecCCCe-eeecccccC
Q 007000 115 WMQHFNVP-VAHS---AAEVHFVVKDNDFVG-SQIMGAVGIPVEKLCSGDK-IEGAFPILN 169 (622)
Q Consensus 115 WNE~f~~~-v~~~---~~~L~l~V~D~d~~~-dd~IG~~~i~L~~l~~g~~-~~~W~~L~~ 169 (622)
|||+|.|. +... ...|.|+|||++..+ +++||++.++|+++..+.. ...|++|..
T Consensus 73 wne~f~f~~v~~~~~~~~~l~i~V~d~d~~~~~~~lG~~~i~l~~l~~~~~~~~~~~~l~~ 133 (138)
T 1ugk_A 73 FDETFTFYGIPYTQIQELALHFTILSFDRFSRDDIIGEVLIPLSGIELSEGKMLMNREIIS 133 (138)
T ss_dssp EEEEEEEECCCSTTGGGCEEEEEEEEECSSCCCCCCEEEEEECTTCCCTTCCEEEEEECBS
T ss_pred EeeEEEEcCcCHHHhccCEEEEEEEECCCCCCCcEEEEEEEehhHccCCCCcchhhhhhhc
Confidence 99999995 6542 268999999999887 8899999999999986543 456789864
No 41
>4gel_A Mitochondrial cardiolipin hydrolase; piRNA, phospholipase D, nuclease; 1.76A {Drosophila melanogaster} PDB: 4gem_A 4gen_A
Probab=99.68 E-value=2.4e-17 Score=163.39 Aligned_cols=154 Identities=16% Similarity=0.127 Sum_probs=110.1
Q ss_pred ccchhHHHHHHHHHHhcccEEEEEEEeecceeeEEeCCCCchhHHHHHHhhhcCCCeEEEEEeCCCcccccccccccCcc
Q 007000 246 FNHESCWQDVYDAINQARRLIYITGWSVYHTVRLVRDGSNTLMLGDLLKIKSQEGVRVLILAWDDPTSRSILGYKTDGIM 325 (622)
Q Consensus 246 ~~~~~~f~~l~~aI~~Ar~~I~I~~y~~~p~~~i~~~~~~g~~l~~~L~~aa~rGV~VriLv~D~~gs~~~~~~~~~~~~ 325 (622)
+-..+.++.|+++|++|+++|+|++| ++.+ ..|.++|.+||+|||+||||+ |..++....
T Consensus 54 ~~~~~~~~~ii~~I~~A~~sI~i~~Y-------~~~~----~~I~~aL~~Aa~RGV~VRii~-D~~~~~~~~-------- 113 (220)
T 4gel_A 54 HCSLRNVAKIVEQIDRAVYSIDLAIY-------TFTS----LFLADSIKRALQRGVIIRIIS-DGEMVYSKG-------- 113 (220)
T ss_dssp TCHHHHHHHHHHHHHTCSSEEEEECS-------CBCC----HHHHHHHHHHHHHTCEEEEEC-CTTTTTSTT--------
T ss_pred cCcHHHHHHHHHHHHHhhhEEEEEEE-------EeCC----HHHHHHHHHHHHcCCeEEEEE-echhhhhhH--------
Confidence 33345799999999999999999999 4544 689999999999999999996 987653211
Q ss_pred CCChHHHHhhhcCCCeEEEecCCCCCCCccccc-c---cccccccccccceEEEccCCccCcceeEEEEcccccCCcccC
Q 007000 326 STNDEETRRFFKHSSVQVLLCPRSAGKGHSFVK-K---QEVGTIYTHHQKTVVVDADAGQFKRKIIAFVGGLDLCKGRYD 401 (622)
Q Consensus 326 ~~~~~~~~~~l~~~gv~v~~~~~~~~~~~~~~~-~---~~~~~~~r~HrK~vVIDg~~~~~~~~~vafvGG~Ni~~~~~d 401 (622)
.....+..+++.+............++- + ...+.+.++|+|++++|+ .++++||+|+++..+
T Consensus 114 -----~~~~~~~~~~~~~~~~~~~~~~h~K~~viD~~~~~~~~~~~~H~K~~v~D~--------~~v~~GS~N~t~~s~- 179 (220)
T 4gel_A 114 -----SQISMLAQLGVPVRVPITTNLMHNKFCIIDGFERVEEIRLLRKLKFMRPCY--------SIVISGSVNWTALGL- 179 (220)
T ss_dssp -----CHHHHHHHTTCCEEECCSSSCBCCCEEEESCHHHHHHHHHHTTCSCCCCCC--------CEEEEESCCBSHHHH-
T ss_pred -----HHHHHHHhcCCcEEeecccccccceeEEEcchhcccccccccceecccccc--------ceEEecCcccccccc-
Confidence 1233344556555543111000011110 0 112345789999999999 899999999887543
Q ss_pred CCCCCCccccccccCCCCCCCCCCCCCCCCCCCCceeeeeEEeChHHHHHHHHHHHHHhhccC
Q 007000 402 TPAHPLFKTLETVHKDDYYNPSLLEPIAGGPREPWHDLHCRIDGPAAYDILTNFEERWLKASK 464 (622)
Q Consensus 402 ~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~D~~~ri~Gpav~dl~~~F~~~W~~~~~ 464 (622)
...|.|+.+...|++|.++++.|.+.|+....
T Consensus 180 -------------------------------~~N~E~~~vi~~~~~a~~~~~~F~~~W~~~~~ 211 (220)
T 4gel_A 180 -------------------------------GGNWENCIITADDKLTATFQAEFQRMWRAFAK 211 (220)
T ss_dssp -------------------------------HTSBEEEEEECCHHHHHHHHHHHHHHHHHSEE
T ss_pred -------------------------------ccCceEEEEEECHHHHHHHHHHHHHHHHhccC
Confidence 23588999988999999999999999997543
No 42
>1dqv_A Synaptotagmin III; beta sandwich, calcium ION, C2 domain, endocytosis/exocytosis complex; 3.20A {Rattus rattus} SCOP: b.7.1.2 b.7.1.2 PDB: 3hn8_A
Probab=99.67 E-value=1.5e-16 Score=164.94 Aligned_cols=177 Identities=20% Similarity=0.244 Sum_probs=121.8
Q ss_pred eceEEEEEEEEeecCCCCCccccccccccccccccccccccccCCCCCCCCcEEEEEE---CCEEEeeeeeecCCCCCee
Q 007000 39 LHGNLDIWVKEAKNLPNMDMFHKKIGDVFGKLNVKVTSKIESHLSDKITSDPYVTVSI---CGAVIGRTFVISNSESPVW 115 (622)
Q Consensus 39 ~~g~L~v~V~~A~~L~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~DPYv~V~l---~~~~~~kT~vi~~t~nPvW 115 (622)
..+.|+|+|++|++|+.+|. .|.+||||+|.+ +.+.. ||+++++++||+|
T Consensus 18 ~~~~L~v~v~~a~~L~~~d~--------------------------~g~~dPyv~v~l~~~~~~~~-kT~v~~~t~nP~w 70 (296)
T 1dqv_A 18 GSDQLVVRILQALDLPAKDS--------------------------NGFSDPYVKIYLLPDRKKKF-QTKVHRKTLNPIF 70 (296)
T ss_dssp SSCEEEEEEEEEECCCCCST--------------------------TSCCCEEEEEECTTSTTSCE-ECCCCCSCSSCEE
T ss_pred CCCEEEEEEEEeECCCCcCC--------------------------CCCcCeEEEEEEEcCCCeeE-eCCccCCCCCCcE
Confidence 35789999999999998875 567999999999 34444 9999999999999
Q ss_pred eeEEEEecCCC---CcEEEEEEEecCCcC-CeeeEeEEEe-ceeecC-CCeeeecccccCCCCCccccCceEEEEEEeec
Q 007000 116 MQHFNVPVAHS---AAEVHFVVKDNDFVG-SQIMGAVGIP-VEKLCS-GDKIEGAFPILNSSRKPCKAGAVLSLSIQYTP 189 (622)
Q Consensus 116 NE~f~~~v~~~---~~~L~l~V~D~d~~~-dd~IG~~~i~-L~~l~~-g~~~~~W~~L~~~~g~~~k~~G~I~L~l~f~p 189 (622)
||+|.|.+... ...|+|+|||+|.++ +++||++.++ +.++.. +...+.|++|....+.. ...|++++.+.|.|
T Consensus 71 ne~f~f~v~~~~l~~~~L~~~V~d~d~~~~~~~iG~~~i~~l~~~~~~~~~~~~w~~L~~~~~~~-~~~G~i~vsl~y~~ 149 (296)
T 1dqv_A 71 NETFQFSVPLAELAQRKLHFSVYDFDRFSRHDLIGQVVLDNLLELAEQPPDRPLWRDILEGGSEK-ADLGELNFSLCYLP 149 (296)
T ss_dssp EEEEEEECCGGGGSSCCCEEEEEECCSSSCCCEEEEEECCCTTGGGSSCSSCCCCEECBCCSSCC-SCCCEEEEEEEEET
T ss_pred eeEEEEEecHHHhcCCEEEEEEEEcCCCCCCceEEEEEeccccccccCCccceeeeccccccccc-cccceEEEEEEecc
Confidence 99999998643 248999999999887 8999999996 444443 44567899997543322 35689999999988
Q ss_pred cccc-ccc---ccCCCCCCCccCCCCCCCCCcCCCeEEEeecCcCCCCccceeEecCCccccchh
Q 007000 190 VENM-SLY---YRGVGSGPDYIGVPGTYFPLRRGGKVTLYQDAHAHDGCLADLKLDGGVQFNHES 250 (622)
Q Consensus 190 ~~~l-~~~---~~g~~~~~~~~~~~~~~~~~~~g~~v~l~~~g~~~~~~~~~~~~~~~~~~~~~~ 250 (622)
.... ... .+++.. .+..+ ...|++ ++.+..+|......++.+...+.+|..++.
T Consensus 150 ~~~~l~v~v~~a~~L~~-~d~~g---~~Dpyv---~v~l~~~~~~~~~~kT~v~~~t~nP~wne~ 207 (296)
T 1dqv_A 150 TAGLLTVTIIKASNLKA-MDLTG---FSDPYV---KASLISEGRRLKKRKTSIKKNTLNPTYNEA 207 (296)
T ss_dssp TTTEEEEEEEEEESCCC-CSSSS---CCCEEE---EECCCTTCCTTSCEECCCCCSCSSCEEEEC
T ss_pred ccceeEEEEEEeecCCc-cCCCC---CCCcEE---EEEEEeCCcCccceecceecCCCCCeECce
Confidence 5431 111 111110 11111 124554 455555555444556666666666665443
No 43
>2cjt_A UNC-13 homolog A, MUNC13-1; phorbol-ester binding, neurotransmitter release, RIM, MUNC13 domains, exocytosis, metal-binding; 1.44A {Rattus norvegicus} SCOP: b.7.1.1
Probab=99.66 E-value=3.7e-16 Score=142.69 Aligned_cols=115 Identities=17% Similarity=0.208 Sum_probs=80.0
Q ss_pred ceEEEEEEEEeecCCCCCccccccccccccccccccccccccCCCCCCCCcEEEEEECCEEEeeeeeec-CCCCCeeeeE
Q 007000 40 HGNLDIWVKEAKNLPNMDMFHKKIGDVFGKLNVKVTSKIESHLSDKITSDPYVTVSICGAVIGRTFVIS-NSESPVWMQH 118 (622)
Q Consensus 40 ~g~L~v~V~~A~~L~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~DPYv~V~l~~~~~~kT~vi~-~t~nPvWNE~ 118 (622)
.+.|.|+|++|++|+. .|.+||||+|+. +.. ||++++ ++.||+|||+
T Consensus 4 ~~~L~V~V~~A~~l~~-----------------------------~g~~DPYv~v~~--~~~-kt~~~~~~t~nP~WnE~ 51 (131)
T 2cjt_A 4 MSLLCVGVKKAKFDGA-----------------------------QEKFNTYVTLKV--QNV-KSTTIAVRGSQPSWEQD 51 (131)
T ss_dssp CEEEEEEEEEEECSSC-----------------------------GGGCEEEEEEEE--TTE-EEECCCEESSSCEEEEE
T ss_pred ceEEEEEEEEeECCCC-----------------------------CCCcCeEEEEEe--cCE-EEeEecCCCCCceECCE
Confidence 4889999999998852 245899999992 233 566654 6999999999
Q ss_pred EEEecCCCCcEEEEEEEecCCcC-CeeeEeEEEeceeecCCC------eeeecccccCCCCCc----cccCceEEEEEEe
Q 007000 119 FNVPVAHSAAEVHFVVKDNDFVG-SQIMGAVGIPVEKLCSGD------KIEGAFPILNSSRKP----CKAGAVLSLSIQY 187 (622)
Q Consensus 119 f~~~v~~~~~~L~l~V~D~d~~~-dd~IG~~~i~L~~l~~g~------~~~~W~~L~~~~g~~----~k~~G~I~L~l~f 187 (622)
|.|.+......|.|+|||+| .+ |++||++.|+|+++.... -...|+++...+|+. ....+.+.++++|
T Consensus 52 f~f~v~~~~~~L~~~V~D~d-~~~dd~iG~~~i~l~~l~~~~~~~~~~~~~~~~~~~~~~g~~~G~~~p~~~~~~~~~~~ 130 (131)
T 2cjt_A 52 FMFEINRLDLGLTVEVWNKG-LIWDTMVGTVWIPLRTIRQSNEEGPGEWLTLDSQAIMADSEICGTKDPTFHRILLDAHF 130 (131)
T ss_dssp EEEEECCCSSEEEEEEEECC-SSCEEEEEEEEEEGGGSCBCSSCCCCEEEECBC----------CCSCCCCCEEEEEEEE
T ss_pred EEEEEeCCCCeEEEEEEECC-CCCCCeEEEEEEEHHHhhhcCCCCccccEEcccccccCCCcCcceECCCccEEEEEEEe
Confidence 99999877778999999999 55 899999999999986432 112334433333332 1223457777766
No 44
>3l9b_A Otoferlin; C2-domain, beta-sheets, cell membrane, synaptic V hearing, membrane, synapse, transmembrane, membrane protein; 1.95A {Rattus norvegicus}
Probab=99.63 E-value=1.6e-15 Score=138.52 Aligned_cols=116 Identities=16% Similarity=0.290 Sum_probs=101.7
Q ss_pred EEEEEEEEeecCCCCCccccccccccccccccccccccccCCCCCCCCcEEEEEECCEEEeeeeeec-CCCCCeeeeEEE
Q 007000 42 NLDIWVKEAKNLPNMDMFHKKIGDVFGKLNVKVTSKIESHLSDKITSDPYVTVSICGAVIGRTFVIS-NSESPVWMQHFN 120 (622)
Q Consensus 42 ~L~v~V~~A~~L~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~DPYv~V~l~~~~~~kT~vi~-~t~nPvWNE~f~ 120 (622)
.|+|+|.+|++|+. ++|||++|.+.+.++ ||++++ ++.||+|||.|+
T Consensus 22 sL~V~l~~a~~Lpg-------------------------------~~Dp~akv~FRg~k~-kTkvi~~~~~npvfnE~F~ 69 (144)
T 3l9b_A 22 ALIVHLKTVSELRG-------------------------------RADRIAKVTFRGQSF-YSRVLENCEDVADFDETFR 69 (144)
T ss_dssp EEEEEEEEEESCCS-------------------------------CEEEEEEEEETTEEE-ECCCEEEECSCEEEEEEEE
T ss_pred EEEEEEEEecCCCC-------------------------------CCCCeEEEEEeccce-eeEEeccCCCCceEcceEE
Confidence 58999999999983 379999999998888 999998 699999999999
Q ss_pred EecCCC---CcEEEEEEEecCCcC-CeeeEeEEEeceeecCCCeeeecccccCCCCCccccCceEEEEEEeeccc
Q 007000 121 VPVAHS---AAEVHFVVKDNDFVG-SQIMGAVGIPVEKLCSGDKIEGAFPILNSSRKPCKAGAVLSLSIQYTPVE 191 (622)
Q Consensus 121 ~~v~~~---~~~L~l~V~D~d~~~-dd~IG~~~i~L~~l~~g~~~~~W~~L~~~~g~~~k~~G~I~L~l~f~p~~ 191 (622)
+++... .+.|++.|+|++.++ +++||++.++|.++..++....+.+|.+.++++. .++|.++++|.|..
T Consensus 70 wpl~~~ld~~e~L~v~V~d~~~v~~nrlIG~~~i~Lq~lv~~~~l~l~~~LvD~n~~~~--~a~I~l~l~Y~pp~ 142 (144)
T 3l9b_A 70 WPVASSIDRNEVLEIQIFNYSKVFSNKLIGTFRMVLQKVVEENRVEVSDTLIDDNNAII--KTSLSMEVRYQAAD 142 (144)
T ss_dssp EEESSCCCTTCEEEEEEEEECTTSCCEEEEEEEEESHHHHHHSEEEEEEEEECTTSCEE--EEEEEEEEEEEETT
T ss_pred ecCCCCCCCCCEEEEEEEECccccCCCEEEEEEEEhHHhccCCeEEEeecccCCCCCcc--ccEEEEEEEecCCC
Confidence 998542 378999999999887 8999999999999997777777889988888764 37999999999854
No 45
>3jzy_A Intersectin 2; C2 domain, structural genomics consortium (SGC), endocytosis; 1.56A {Homo sapiens} PDB: 3qbv_B* 1ki1_B
Probab=99.58 E-value=6.7e-15 Score=163.41 Aligned_cols=117 Identities=18% Similarity=0.254 Sum_probs=98.2
Q ss_pred eceEEEEEEEEeecCCCCCccccccccccccccccccccccccCCCCCCCCcEEEEEECCEEEeeeeeecCCCCCeeeeE
Q 007000 39 LHGNLDIWVKEAKNLPNMDMFHKKIGDVFGKLNVKVTSKIESHLSDKITSDPYVTVSICGAVIGRTFVISNSESPVWMQH 118 (622)
Q Consensus 39 ~~g~L~v~V~~A~~L~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~DPYv~V~l~~~~~~kT~vi~~t~nPvWNE~ 118 (622)
..|+|+|+|++|++|+.+|. .|++||||+|.+++++. +|+++++++||+|||+
T Consensus 385 ~~~~l~v~v~~a~~L~~~d~--------------------------~~~sdpyv~v~~~~~~~-~T~~~~~t~nP~w~e~ 437 (510)
T 3jzy_A 385 GIGRLMVHVIEATELKACKP--------------------------NGKSNPYCEISMGSQSY-TTRTIQDTLNPKWNFN 437 (510)
T ss_dssp -CEEEEEEEEEEESCCCCST--------------------------TSCCCEEEEEEETTEEE-ECCCCSSCSSCEEEEE
T ss_pred CCceEEEEeceeecCCCCCC--------------------------CCCCCeEEEEEECCeec-cCCccCCCCCCccCce
Confidence 34789999999999998875 56799999999988776 9999999999999999
Q ss_pred EEEecCCCC-cEEEEEEEecCCcC-CeeeEeEEEeceeecCCCe----eeecccccCCCCCccccCceEEEEEEee
Q 007000 119 FNVPVAHSA-AEVHFVVKDNDFVG-SQIMGAVGIPVEKLCSGDK----IEGAFPILNSSRKPCKAGAVLSLSIQYT 188 (622)
Q Consensus 119 f~~~v~~~~-~~L~l~V~D~d~~~-dd~IG~~~i~L~~l~~g~~----~~~W~~L~~~~g~~~k~~G~I~L~l~f~ 188 (622)
|.|.+.... ..|+|+|||+|..+ +++||++.++|+++..+.. ...|++|... ..|++++.+++.
T Consensus 438 f~f~~~~~~~~~l~~~v~d~d~~~~~d~lG~~~~~l~~l~~~~~~~~~~~~~~~l~~~------~~G~i~l~~~l~ 507 (510)
T 3jzy_A 438 CQFFIKDLYQDVLCLTLFDRDQFSPDDFLGRTEIPVAKIRTEQESKGPMTRRLLLHEV------PTGEVWVRFDLQ 507 (510)
T ss_dssp EEEEESCTTTCEEEEEEEECCSSSSCCEEEEEEEEHHHHHHHHHHHCSCCEEEECBSS------SSCEEEEEEEEE
T ss_pred EEEEecCCCCCEEEEEEEeCCCCCCCCceEEEEEEHHHhccccCCCCceeeeecCCCC------CCceEEEEEEEE
Confidence 999987655 78999999999987 8999999999999986543 6789998532 336777776653
No 46
>2cjs_A UNC-13 homolog A, MUNC13-1; neurotransmitter transport, zinc finger, synapto phorbol-ester binding; 1.78A {Rattus norvegicus} SCOP: b.7.1.1
Probab=99.58 E-value=5.9e-15 Score=140.43 Aligned_cols=85 Identities=21% Similarity=0.292 Sum_probs=70.9
Q ss_pred eEEEEEEEEeecCCCCCccccccccccccccccccccccccCCCCCCCCcEEEEEECCEEEeeeeeec-CCCCCeeeeEE
Q 007000 41 GNLDIWVKEAKNLPNMDMFHKKIGDVFGKLNVKVTSKIESHLSDKITSDPYVTVSICGAVIGRTFVIS-NSESPVWMQHF 119 (622)
Q Consensus 41 g~L~v~V~~A~~L~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~DPYv~V~l~~~~~~kT~vi~-~t~nPvWNE~f 119 (622)
+.|+|+|++|++|+. .+++||||+|+ .+.. ||++++ ++.||+|||+|
T Consensus 14 ~~L~V~V~~A~~l~~-----------------------------~g~~DPYV~v~--~~~~-kt~~~~~~t~nP~WnE~f 61 (167)
T 2cjs_A 14 SLLCVGVKKAKFDGA-----------------------------QEKFNTYVTLK--VQNV-ESTTIAVRGSQPSWEQDF 61 (167)
T ss_dssp CEEEEEEEEEECSSC-----------------------------GGGCEEEEEEE--ETTE-EEECCCEESSSCEEEEEE
T ss_pred EEEEEEEEEEECCCC-----------------------------CCCCCeEEEEE--ecce-EEEEecCCCCCCCCCCEE
Confidence 789999999998852 24589999999 2333 677765 69999999999
Q ss_pred EEecCCCCcEEEEEEEecCCcCCeeeEeEEEeceeecC
Q 007000 120 NVPVAHSAAEVHFVVKDNDFVGSQIMGAVGIPVEKLCS 157 (622)
Q Consensus 120 ~~~v~~~~~~L~l~V~D~d~~~dd~IG~~~i~L~~l~~ 157 (622)
.|.+......|.|+|||+|...|++||++.|+|+++..
T Consensus 62 ~f~v~~~~~~L~~~V~D~d~~~dd~iG~~~i~L~~l~~ 99 (167)
T 2cjs_A 62 MFEINRLDLGLTVEVWNKGLIWDTMVGTVWIPLRTIRQ 99 (167)
T ss_dssp EEECCCTTSEEEEEEEECCSSCCEEEEEEEEEGGGSCB
T ss_pred EEEeeCCCCEEEEEEEECCCCCCceEEEEEEEHHHhcc
Confidence 99998777789999999993348999999999999864
No 47
>1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme delta1; phosphoric diester hydrolase, hydrolase, lipid degradation, transducer; HET: I3P; 2.30A {Rattus norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A 1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A 1qat_A
Probab=99.56 E-value=1.6e-14 Score=163.98 Aligned_cols=121 Identities=26% Similarity=0.374 Sum_probs=99.9
Q ss_pred ceEEEEEEEEeecCCCCCccccccccccccccccccccccccCCCCCCCCcEEEEEECC----EEEeeeeeecCC-CCCe
Q 007000 40 HGNLDIWVKEAKNLPNMDMFHKKIGDVFGKLNVKVTSKIESHLSDKITSDPYVTVSICG----AVIGRTFVISNS-ESPV 114 (622)
Q Consensus 40 ~g~L~v~V~~A~~L~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~DPYv~V~l~~----~~~~kT~vi~~t-~nPv 114 (622)
.+.|+|+|++|++|+.+|.. ..+.+||||+|.+.+ ....||++++++ +||+
T Consensus 496 ~~~L~V~Vi~A~~L~~~d~~------------------------~~~~~DPYV~V~l~g~~~d~~~~kTkvi~~ng~NP~ 551 (624)
T 1djx_A 496 PERLRVRIISGQQLPKVNKN------------------------KNSIVDPKVIVEIHGVGRDTGSRQTAVITNNGFNPR 551 (624)
T ss_dssp CEEEEEEEEEEESCCCCSSC------------------------SSSCCCEEEEEEEESSGGGCEEEECCCCTTCSSSCE
T ss_pred ceEEEEEEEEcCCCCccccc------------------------ccCCCCcEEEEEEecCCCCcceeecccccCCCCCCc
Confidence 47899999999999987631 146799999999944 234499999997 9999
Q ss_pred eeeEEEEecCCCC-cEEEEEEEecCCcC-CeeeEeEEEeceeecCCCeeeecccccCCCCCccccCceEEEEEEee
Q 007000 115 WMQHFNVPVAHSA-AEVHFVVKDNDFVG-SQIMGAVGIPVEKLCSGDKIEGAFPILNSSRKPCKAGAVLSLSIQYT 188 (622)
Q Consensus 115 WNE~f~~~v~~~~-~~L~l~V~D~d~~~-dd~IG~~~i~L~~l~~g~~~~~W~~L~~~~g~~~k~~G~I~L~l~f~ 188 (622)
|||+|.|.+..+. ..|+|+|||+|..+ +++||++.++|.+|..|. .|++|.+..|++. ..+++.+.++|.
T Consensus 552 WnE~f~F~v~~~el~~L~~~V~D~D~~~~dd~iG~~~ipl~~L~~G~---r~v~L~d~~g~~~-~~~~L~v~i~~~ 623 (624)
T 1djx_A 552 WDMEFEFEVTVPDLALVRFMVEDYDSSSKNDFIGQSTIPWNSLKQGY---RHVHLLSKNGDQH-PSATLFVKISIQ 623 (624)
T ss_dssp EEEEEEEEESCGGGCEEEEEEEECCSSSCCEEEEEEEEEGGGBCCEE---EEEEEECTTSCEE-EEEEEEEEEEEE
T ss_pred cCceEEEEEecCCCCEEEEEEEEcCCCCCCceeEEEEEEHHHcCCCc---EEEeCCCCCcCCC-CceEEEEEEEEE
Confidence 9999999987654 78999999999886 899999999999998763 6999998888754 346777777764
No 48
>3nsj_A Perforin-1; pore forming protein, immune system; HET: NAG; 2.75A {Mus musculus}
Probab=99.55 E-value=2.3e-14 Score=159.59 Aligned_cols=111 Identities=20% Similarity=0.263 Sum_probs=91.8
Q ss_pred eEEEEEEEEeecCCCCCccccccccccccccccccccccccCCCCCCCCcEEEEEECCEEEeeeeeecCCCCCeeeeEEE
Q 007000 41 GNLDIWVKEAKNLPNMDMFHKKIGDVFGKLNVKVTSKIESHLSDKITSDPYVTVSICGAVIGRTFVISNSESPVWMQHFN 120 (622)
Q Consensus 41 g~L~v~V~~A~~L~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~DPYv~V~l~~~~~~kT~vi~~t~nPvWNE~f~ 120 (622)
|.|+|+|++|++|+. |. .|++||||+|++++++. ||+|+++++||+|||+|.
T Consensus 394 ~~L~V~V~~A~~L~~-D~--------------------------~g~sDPYV~v~l~~~~~-kTkvik~tlNP~Wne~f~ 445 (540)
T 3nsj_A 394 AHLVVSNFRAEHLWG-DY--------------------------TTATDAYLKVFFGGQEF-RTGVVWNNNNPRWTDKMD 445 (540)
T ss_dssp EEEEEEEEEEESCCC-SS--------------------------CSCCCEEEEEEETTEEE-ECCCBCSCSSCBCCCCEE
T ss_pred cEEEEEEEEccCCCc-cc--------------------------CCCcCeEEEEEECCEee-eeeeecCCCCCCCCeEEE
Confidence 899999999999998 75 46699999999998875 999999999999999999
Q ss_pred EecC--CCCcEEEEEEEecCCcC-CeeeEeEEEeceeecCCCeeeecccccCCCCCccccCceEEEEEEeecccc
Q 007000 121 VPVA--HSAAEVHFVVKDNDFVG-SQIMGAVGIPVEKLCSGDKIEGAFPILNSSRKPCKAGAVLSLSIQYTPVEN 192 (622)
Q Consensus 121 ~~v~--~~~~~L~l~V~D~d~~~-dd~IG~~~i~L~~l~~g~~~~~W~~L~~~~g~~~k~~G~I~L~l~f~p~~~ 192 (622)
|.+. ...+.|+|.|||+|..+ ||+||++.++|. .| ..+.|++|. + |.|++.++..-...
T Consensus 446 f~~~~~~~~~~L~~~V~D~D~~~~dD~LG~~~~~L~---~g-~~~~~~~l~--~-------G~l~~~~~~~c~p~ 507 (540)
T 3nsj_A 446 FENVLLSTGGPLRVQVWDADYGWDDDLLGSCDRSPH---SG-FHEVTCELN--H-------GRVKFSYHAKCLPH 507 (540)
T ss_dssp EEEEETTTCCCEEEEEEECCSSSCCEEEEEEEECCC---SE-EEEEEEECS--S-------SEEEEEEEEEECTT
T ss_pred EEEecCCCCCEEEEEEEECCCCCCCCEEEEEEEEee---CC-cEEEEEEcC--C-------eEEEEEEEEEECCC
Confidence 9853 24578999999999987 799999999987 34 367898872 2 56777777664433
No 49
>3bxj_A RAS GTPase-activating protein syngap; GTPase activation, membrane, phosphoprotein, SH3-binding, signaling protein; 3.00A {Rattus norvegicus}
Probab=99.53 E-value=1.2e-15 Score=168.62 Aligned_cols=122 Identities=20% Similarity=0.340 Sum_probs=22.0
Q ss_pred eEEEEEEEEeecCCCCCccccccccccccccccccccccccCCCCCCCCcEEEEEECCEEEeeeeeecCC---CCCeeee
Q 007000 41 GNLDIWVKEAKNLPNMDMFHKKIGDVFGKLNVKVTSKIESHLSDKITSDPYVTVSICGAVIGRTFVISNS---ESPVWMQ 117 (622)
Q Consensus 41 g~L~v~V~~A~~L~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~DPYv~V~l~~~~~~kT~vi~~t---~nPvWNE 117 (622)
+.|+|+|++|++|+++ .||||++.++++..+||+++++| +||+|||
T Consensus 11 ~~L~V~VieAk~L~~~-------------------------------ddpYv~v~l~~~~~~kT~v~~kt~~glnP~WnE 59 (483)
T 3bxj_A 11 NVLKLWIIEARELPPK-------------------------------KRYYCELCLDDMLYARTTSKPRSASGDTVFWGE 59 (483)
T ss_dssp ECC----------------------------------------------------------------------------C
T ss_pred cEEEEEEEEcCCcCCC-------------------------------CCCeEEEEECCeEEeeeeEEeCCCCCCCCcccc
Confidence 8899999999999853 28999999998877799999999 9999999
Q ss_pred EEEEecCCCCcEEEEEEEe-cCC---c-CCeeeEeEEEeceeecCCCeeeecccccCCCC--------------------
Q 007000 118 HFNVPVAHSAAEVHFVVKD-NDF---V-GSQIMGAVGIPVEKLCSGDKIEGAFPILNSSR-------------------- 172 (622)
Q Consensus 118 ~f~~~v~~~~~~L~l~V~D-~d~---~-~dd~IG~~~i~L~~l~~g~~~~~W~~L~~~~g-------------------- 172 (622)
+|.|.+.+..+.|.|+||| +|. . ++++||++.|+++++..+...+.|++|....+
T Consensus 60 ~F~f~~~~~~~~L~v~V~d~~d~~~~~~~d~~lG~v~i~l~~l~~~~~~~~W~~L~~~~~~~~s~~~~~~~~~~~~~~~~ 139 (483)
T 3bxj_A 60 HFEFNNLPAVRALRLHLYRDSDKKRKKDKAGYVGLVTVPVATLAGRHFTEQWYPVTLPTGSGGSGGMGSGGGGGSGGGSG 139 (483)
T ss_dssp CEECC------------------------------------------CCEECC---------------------------
T ss_pred EEEEecCCCccEEEEEEEecCCccccCCCCceEEEEEEEHHHhcCCCCCCeEEECCCCCCcccccccccccccccccccc
Confidence 9999865445789999999 452 3 48999999999999998878899999965432
Q ss_pred -CccccCceEEEEEEeeccccc
Q 007000 173 -KPCKAGAVLSLSIQYTPVENM 193 (622)
Q Consensus 173 -~~~k~~G~I~L~l~f~p~~~l 193 (622)
+..+..|.++|.++|.+...+
T Consensus 140 ~~~~~~~G~lrL~v~~~~~~vl 161 (483)
T 3bxj_A 140 GKGKGGCPAVRLKARYQTMSIL 161 (483)
T ss_dssp -----------CEEEEEECCBC
T ss_pred ccCCCCCceEEEEEEeeeeeec
Confidence 111235789999999875533
No 50
>2r83_A Synaptotagmin-1; C2A-C2B, exocytosis, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal-binding palmitate; 2.70A {Homo sapiens} SCOP: b.7.1.2
Probab=99.50 E-value=8e-14 Score=142.98 Aligned_cols=106 Identities=26% Similarity=0.380 Sum_probs=83.4
Q ss_pred eeEeeceEEEEEEEEeecCCCCCccccccccccccccccccccccccCCCCCCCCcEEEEEEC--CE--EEeeeeeecCC
Q 007000 35 KVLLLHGNLDIWVKEAKNLPNMDMFHKKIGDVFGKLNVKVTSKIESHLSDKITSDPYVTVSIC--GA--VIGRTFVISNS 110 (622)
Q Consensus 35 ~~~~~~g~L~v~V~~A~~L~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~DPYv~V~l~--~~--~~~kT~vi~~t 110 (622)
+.....+.|.|+|++|++|+.+|. .|.+||||+|.+. +. ...||++++++
T Consensus 144 ~~~p~~~~l~v~v~~a~~L~~~d~--------------------------~~~~dpyv~v~~~~~~~~~~~~kT~v~~~t 197 (284)
T 2r83_A 144 RYVPTAGKLTVVILEAKNLKKMDV--------------------------GGLSDPYVKIHLMQNGKRLKKKKTTIKKNT 197 (284)
T ss_dssp EEETTTTEEEEEEEEEESCCCCST--------------------------TSCCCEEEEEEEEETTEEEEEEECCCCCSC
T ss_pred EecCcCCceEEEEEEeECCCCcCC--------------------------CCCcCeEEEEEEEeCCcEeeeeccceecCC
Confidence 333346789999999999998875 4668999999994 32 34599999999
Q ss_pred CCCeeeeEEEEecCCCC---cEEEEEEEecCCcC-CeeeEeEEEeceeecCCCeeeeccccc
Q 007000 111 ESPVWMQHFNVPVAHSA---AEVHFVVKDNDFVG-SQIMGAVGIPVEKLCSGDKIEGAFPIL 168 (622)
Q Consensus 111 ~nPvWNE~f~~~v~~~~---~~L~l~V~D~d~~~-dd~IG~~~i~L~~l~~g~~~~~W~~L~ 168 (622)
+||+|||+|.|.+.... ..|.|+|||++..+ +++||++.++++.+. ....+|+.+.
T Consensus 198 ~nP~wne~f~f~v~~~~l~~~~l~i~V~d~d~~~~~~~iG~~~i~l~~~~--~~~~~w~~~~ 257 (284)
T 2r83_A 198 LNPYYNESFSFEVPFEQIQKVQVVVTVLDYDKIGKNDAIGKVFVGYNSTG--AELRHWSDML 257 (284)
T ss_dssp SSCEEEEEEEEECCTTTGGGEEEEEEEEECCSSSCCCEEEEEEEETTCCH--HHHHHHHHHH
T ss_pred CCCEEceeEEEeCCHHHhCceEEEEEEEeCCCCCCCcEEEEEEECCCCCC--cHHHHHHHHH
Confidence 99999999999986542 47999999999887 899999999997642 2234454443
No 51
>1cjy_A CPLA2, protein (cytosolic phospholipase A2); lipid-binding, hydrolase; HET: MES; 2.50A {Homo sapiens} SCOP: b.7.1.1 c.19.1.2 PDB: 1bci_A
Probab=99.47 E-value=4.3e-14 Score=162.17 Aligned_cols=103 Identities=24% Similarity=0.360 Sum_probs=90.3
Q ss_pred ceEEEEEEEEeecCCC---CCccccccccccccccccccccccccCCCCCCCCcEEEEEECC--EEEeeeeeecCCCCCe
Q 007000 40 HGNLDIWVKEAKNLPN---MDMFHKKIGDVFGKLNVKVTSKIESHLSDKITSDPYVTVSICG--AVIGRTFVISNSESPV 114 (622)
Q Consensus 40 ~g~L~v~V~~A~~L~~---~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~DPYv~V~l~~--~~~~kT~vi~~t~nPv 114 (622)
.+.|+|+|++|++|+. +|. .|++||||+|++.+ ....||+++++++||+
T Consensus 17 ~g~L~V~Vi~A~nL~~~~~~D~--------------------------~g~sDPYV~V~l~~~~~~k~kTkvik~tlNPv 70 (749)
T 1cjy_A 17 SHKFTVVVLRATKVTKGAFGDM--------------------------LDTPDPYVELFISTTPDSRKRTRHFNNDINPV 70 (749)
T ss_dssp CEEEEEEEEEEECCCSCHHHHH--------------------------HCCCCEEEEEECTTSTTCCEECCCCTTCSSCE
T ss_pred ccEEEEEEEEEECCCCccccCC--------------------------CCCcCeEEEEEEecCCCCeEecceEcCCCCCe
Confidence 4899999999999997 554 45689999999984 2334999999999999
Q ss_pred eeeEEEEecCCC-CcEEEEEEEecCCcCCeeeEeEEEeceeecCCCeeeeccccc
Q 007000 115 WMQHFNVPVAHS-AAEVHFVVKDNDFVGSQIMGAVGIPVEKLCSGDKIEGAFPIL 168 (622)
Q Consensus 115 WNE~f~~~v~~~-~~~L~l~V~D~d~~~dd~IG~~~i~L~~l~~g~~~~~W~~L~ 168 (622)
|||+|.|.+... ...|+|+|||+|.+++++||++.|+|++|..+...+.|++|.
T Consensus 71 WNEtF~F~v~~~~~~~L~~~V~D~D~~~ddfIG~v~I~L~~L~~g~~~~~w~~L~ 125 (749)
T 1cjy_A 71 WNETFEFILDPNQENVLEITLMDANYVMDETLGTATFTVSSMKVGEKKEVPFIFN 125 (749)
T ss_dssp EEEEEEEEECTTSCCBCEEEEEECCSSSCEEEEEECCBSTTSCTTCCCCEEEEET
T ss_pred eeeEEEEEecCCCCCEEEEEEEECCCCCCceeEEEEEEHHHcCCCCceEEEEecC
Confidence 999999999764 478999999999888889999999999998888889999995
No 52
>1dqv_A Synaptotagmin III; beta sandwich, calcium ION, C2 domain, endocytosis/exocytosis complex; 3.20A {Rattus rattus} SCOP: b.7.1.2 b.7.1.2 PDB: 3hn8_A
Probab=99.43 E-value=4.7e-14 Score=146.08 Aligned_cols=109 Identities=28% Similarity=0.382 Sum_probs=87.5
Q ss_pred eceEEEEEEEEeecCCCCCccccccccccccccccccccccccCCCCCCCCcEEEEEEC--CE--EEeeeeeecCCCCCe
Q 007000 39 LHGNLDIWVKEAKNLPNMDMFHKKIGDVFGKLNVKVTSKIESHLSDKITSDPYVTVSIC--GA--VIGRTFVISNSESPV 114 (622)
Q Consensus 39 ~~g~L~v~V~~A~~L~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~DPYv~V~l~--~~--~~~kT~vi~~t~nPv 114 (622)
..|.|+|+|++|++|+.+|. .|.+||||+|.+. ++ ...||+++++++||+
T Consensus 150 ~~~~l~v~v~~a~~L~~~d~--------------------------~g~~Dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~ 203 (296)
T 1dqv_A 150 TAGLLTVTIIKASNLKAMDL--------------------------TGFSDPYVKASLISEGRRLKKRKTSIKKNTLNPT 203 (296)
T ss_dssp TTTEEEEEEEEEESCCCCSS--------------------------SSCCCEEEEECCCTTCCTTSCEECCCCCSCSSCE
T ss_pred ccceeEEEEEEeecCCccCC--------------------------CCCCCcEEEEEEEeCCcCccceecceecCCCCCe
Confidence 46899999999999998875 4668999999995 21 334999999999999
Q ss_pred eeeEEEEecCCCC---cEEEEEEEecCCcC-CeeeEeEEEeceeecCCCeeeecccccCCCCCc
Q 007000 115 WMQHFNVPVAHSA---AEVHFVVKDNDFVG-SQIMGAVGIPVEKLCSGDKIEGAFPILNSSRKP 174 (622)
Q Consensus 115 WNE~f~~~v~~~~---~~L~l~V~D~d~~~-dd~IG~~~i~L~~l~~g~~~~~W~~L~~~~g~~ 174 (622)
|||+|.|.+.... ..|.|+|||++..+ +++||.+.|+++++.. ...++|+.|+...+++
T Consensus 204 wne~f~f~v~~~~l~~~~L~i~V~d~d~~~~~~~iG~~~i~l~~~~~-~~~~~W~~~~~~~~~~ 266 (296)
T 1dqv_A 204 YNEALVFDVAPESVENVGLSIAVVDYDCIGHNEVIGVCRVGPEAADP-HGREHWAEMLANPRKP 266 (296)
T ss_dssp EEECCCCCCCSGGGGSCCCCCEEEECCSSSCCEEEEECCCSSCTTCH-HHHHHHHTSSSSSSSC
T ss_pred ECceEEEEcCHHHccCcEEEEEEEeCCCCCCCceEEEEEECCccCCc-hhHHHHHHHHhCCCCc
Confidence 9999999886542 47999999999987 8999999999986532 1356788776655543
No 53
>3qr0_A Phospholipase C-beta (PLC-beta); PH domain, EF hand, C2 domain, TIM barrel domain, hydrolase, calcium binding, phospholipid binding; 2.00A {Sepia officinalis} PDB: 3qr1_A
Probab=99.26 E-value=1.5e-11 Score=142.49 Aligned_cols=110 Identities=24% Similarity=0.390 Sum_probs=88.7
Q ss_pred eEEEEEEEEeecCCCCCccccccccccccccccccccccccCCCCCCCCcEEEEEECC-------EEEeeeeeecC-CCC
Q 007000 41 GNLDIWVKEAKNLPNMDMFHKKIGDVFGKLNVKVTSKIESHLSDKITSDPYVTVSICG-------AVIGRTFVISN-SES 112 (622)
Q Consensus 41 g~L~v~V~~A~~L~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~DPYv~V~l~~-------~~~~kT~vi~~-t~n 112 (622)
+.|+|+|++|++|+.. .+||||+|.+.+ +++ ||+++++ +.|
T Consensus 650 ~~L~V~Visaq~L~~~------------------------------~~DPYV~V~l~g~p~d~~~~k~-kTkvv~~nglN 698 (816)
T 3qr0_A 650 GTIEIKIISAQFLSDK------------------------------QISSYVEVEMYGLPTDTVRKKF-KTKIIENNGMD 698 (816)
T ss_dssp EEEEEEEEEEECCCSS------------------------------CCCEEEEEEEESSGGGCEEEEE-ECCCBCSCSSC
T ss_pred eEEEEEEEEcccCCCC------------------------------CCCCeEEEEEeCCCccccccee-eeEEecCCCCC
Confidence 6899999999999842 279999999964 344 9999886 699
Q ss_pred CeeeeE-EEEe-cCCCC-cEEEEEEEecCCcCCeeeEeEEEeceeecCCCeeeecccccCCCCCccccCceEEEEEEee
Q 007000 113 PVWMQH-FNVP-VAHSA-AEVHFVVKDNDFVGSQIMGAVGIPVEKLCSGDKIEGAFPILNSSRKPCKAGAVLSLSIQYT 188 (622)
Q Consensus 113 PvWNE~-f~~~-v~~~~-~~L~l~V~D~d~~~dd~IG~~~i~L~~l~~g~~~~~W~~L~~~~g~~~k~~G~I~L~l~f~ 188 (622)
|+|||+ |.|. +..+. ..|+|.|+|++ +++||++.+||+.|..|. ++++|.+..|++. ..++|.+.+...
T Consensus 699 PvWNE~~F~F~~v~~pela~Lrf~V~D~d---ddfiG~~~ipL~~L~~Gy---R~vpL~~~~g~~~-~~atLfv~i~~~ 770 (816)
T 3qr0_A 699 PYYDEKVFVFKKVVLPDLAVVRIIVSEEN---GKFIGHRVMPLDGIKPGY---RHVPLRNESNRPL-GLASVFAHIVAK 770 (816)
T ss_dssp CBCCCCCEEEEEESCGGGCEEEEEEEETT---SCEEEEEEEESTTCCCEE---EEEEEECTTSCEE-EEEEEEEEEEEE
T ss_pred CeEcCceeEEccccCCCccEEEEEEEecC---CCeeeEEEEEHHHcCCcc---eEEEEeCCCCCCC-CceEEEEEEEEE
Confidence 999998 9998 65444 78999999985 799999999999998773 5799988888754 234666666654
No 54
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=99.26 E-value=8.2e-12 Score=143.53 Aligned_cols=105 Identities=27% Similarity=0.434 Sum_probs=89.1
Q ss_pred eeceEEEEEEEEeecCCCCCccccccccccccccccccccccccCCCCCCCCcEEEEEE-----CCEEEeeeeeecCCCC
Q 007000 38 LLHGNLDIWVKEAKNLPNMDMFHKKIGDVFGKLNVKVTSKIESHLSDKITSDPYVTVSI-----CGAVIGRTFVISNSES 112 (622)
Q Consensus 38 ~~~g~L~v~V~~A~~L~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~DPYv~V~l-----~~~~~~kT~vi~~t~n 112 (622)
...+.|.|+|.+|++|+++|. .|++||||++.+ ...+. ||+++++++|
T Consensus 169 ~~~~~L~V~v~~a~~L~~~d~--------------------------~g~sDPyvkv~l~p~~~~~~k~-kT~v~~~tln 221 (674)
T 3pfq_A 169 IDREVLIVVVRDAKNLVPMDP--------------------------NGLSDPYVKLKLIPDPKSESKQ-KTKTIKSSLN 221 (674)
T ss_dssp ECSSEEEEEEEEEESCCCCST--------------------------TSSCCEEEEEEEESCSSCCSCE-ECCCCSSCSS
T ss_pred eccceeeeeeecccccCCCCc--------------------------ccccCcccccccccCccccccc-cccccccccC
Confidence 446789999999999999885 567999999999 22344 9999999999
Q ss_pred CeeeeEEEEecCCC--CcEEEEEEEecCCcC-CeeeEeEEEeceeecCCCeeeecccccCC
Q 007000 113 PVWMQHFNVPVAHS--AAEVHFVVKDNDFVG-SQIMGAVGIPVEKLCSGDKIEGAFPILNS 170 (622)
Q Consensus 113 PvWNE~f~~~v~~~--~~~L~l~V~D~d~~~-dd~IG~~~i~L~~l~~g~~~~~W~~L~~~ 170 (622)
|+|||+|.|.+... ...|.|+|||+|..+ +++||++.++|+++..+. .+.|+.|+..
T Consensus 222 P~wne~f~f~~~~~~~~~~L~v~v~d~d~~~~dd~iG~~~i~l~~l~~~~-~~~w~~Lls~ 281 (674)
T 3pfq_A 222 PEWNETFRFQLKESDKDRRLSVEIWDWDLTSRNDFMGSLSFGISELQKAG-VDGWFKLLSQ 281 (674)
T ss_dssp CEEEEEEEEECCSTTTTCEEEEEEEECCSSSCCEECCBCCCBTTHHHHCC-EEEEEECBCT
T ss_pred CCccceeeeecccCCccceeeeEEeecccccccccccccccchhhhccCC-cccceeeccc
Confidence 99999999988643 367999999999887 899999999999998544 4889999764
No 55
>2zkm_X 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-2; phospholipase C, phosphoinositide phospholipase, PLC-beta-2, calcium, coiled coil; 1.62A {Homo sapiens} SCOP: a.39.1.7 b.7.1.1 b.55.1.1 c.1.18.1 PDB: 2fju_B
Probab=99.25 E-value=1.6e-11 Score=142.78 Aligned_cols=112 Identities=24% Similarity=0.314 Sum_probs=88.1
Q ss_pred ceEEEEEEEEeecCCCCCccccccccccccccccccccccccCCCCCCCCcEEEEEECC----E-EEeeee-eecC-CCC
Q 007000 40 HGNLDIWVKEAKNLPNMDMFHKKIGDVFGKLNVKVTSKIESHLSDKITSDPYVTVSICG----A-VIGRTF-VISN-SES 112 (622)
Q Consensus 40 ~g~L~v~V~~A~~L~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~DPYv~V~l~~----~-~~~kT~-vi~~-t~n 112 (622)
.+.|.|+|++|++|+.. ++||||+|.+.+ . ...||+ ++++ +.|
T Consensus 677 ~~~L~V~Visa~~L~~~------------------------------~~DPYV~V~l~g~p~d~~~k~kTk~vv~~n~~N 726 (799)
T 2zkm_X 677 ATTLSITVISGQFLSER------------------------------SVRTYVEVELFGLPGDPKRRYRTKLSPSTNSIN 726 (799)
T ss_dssp CEEEEEEEEEEESCCSS------------------------------CCCEEEEEEEECCTTSCCCCEECCCCSSSCCSS
T ss_pred eeeEEEEEEeccccCcc------------------------------CCCcEEEEEEEecCCCcccceeecccccCCCCC
Confidence 47899999999999842 379999999942 1 123899 8765 699
Q ss_pred Ceeee-EEEE-ecCCCC-cEEEEEEEecCCcCCeeeEeEEEeceeecCCCeeeecccccCCCCCccccCceEEEEEEee
Q 007000 113 PVWMQ-HFNV-PVAHSA-AEVHFVVKDNDFVGSQIMGAVGIPVEKLCSGDKIEGAFPILNSSRKPCKAGAVLSLSIQYT 188 (622)
Q Consensus 113 PvWNE-~f~~-~v~~~~-~~L~l~V~D~d~~~dd~IG~~~i~L~~l~~g~~~~~W~~L~~~~g~~~k~~G~I~L~l~f~ 188 (622)
|+||| +|.| .+..+. ..|+|.|+|++ +++||++.|||+.|..| ..|++|.+..|.+. ..+++.+.+++.
T Consensus 727 PvWnEe~f~F~~v~~~el~~Lr~~V~D~d---~d~iG~~~ipl~~L~~G---~r~v~L~~~~g~~~-~~~~Lfv~i~~~ 798 (799)
T 2zkm_X 727 PVWKEEPFVFEKILMPELASLRVAVMEEG---NKFLGHRIIPINALNSG---YHHLCLHSESNMPL-TMPALFIFLEMK 798 (799)
T ss_dssp CBCCCCCEEEEEESSGGGCEEEEEEEETT---TEEEEEEEEEGGGBCCE---EEEEEEECTTCCEE-EEEEEEEEEEEE
T ss_pred CeeecceEEEEEEccCCccEEEEEEEEeC---CCccceEeeehhhcCCC---cEEEeccCCCCCCC-CceEEEEEEEEE
Confidence 99999 6999 775444 68999999987 89999999999999876 35899988777754 235666666653
No 56
>3ohm_B 1-phosphatidylinositol-4,5-bisphosphate phosphodi beta-3; PH domain, EF hand, TIM barrel, C2 domain, GTPase, lipase, C binding, GTP binding; HET: GDP; 2.70A {Homo sapiens}
Probab=99.24 E-value=1.5e-11 Score=143.19 Aligned_cols=112 Identities=22% Similarity=0.302 Sum_probs=89.0
Q ss_pred eEEEEEEEEeecCCCCCccccccccccccccccccccccccCCCCCCCCcEEEEEECC-----EEEeeeeeecC-CCCCe
Q 007000 41 GNLDIWVKEAKNLPNMDMFHKKIGDVFGKLNVKVTSKIESHLSDKITSDPYVTVSICG-----AVIGRTFVISN-SESPV 114 (622)
Q Consensus 41 g~L~v~V~~A~~L~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~DPYv~V~l~~-----~~~~kT~vi~~-t~nPv 114 (622)
.+|.|+|++|++|+.. .+||||+|.+.+ ....||+|+++ +.||+
T Consensus 725 ~~L~V~Visaq~L~~~------------------------------~~DPYV~V~l~g~p~D~~~k~kTkvi~~NglNPv 774 (885)
T 3ohm_B 725 NALRVKVISGQFLSDR------------------------------KVGIYVEVDMFGLPVDTRRKYRTRTSQGNSFNPV 774 (885)
T ss_dssp EEEEEEEEEEESCCSS------------------------------CCCEEEEEEEESSTTTCBCCCCCCCCSSCSSSCB
T ss_pred eEEEEEEEEeccCccc------------------------------CCCcEEEEEEeCCCcccccceeeEEeeCCCcCCe
Confidence 4799999999999842 279999999954 12249999976 69999
Q ss_pred eee-EEEEe-cCCCC-cEEEEEEEecCCcCCeeeEeEEEeceeecCCCeeeecccccCCCCCccccCceEEEEEEeec
Q 007000 115 WMQ-HFNVP-VAHSA-AEVHFVVKDNDFVGSQIMGAVGIPVEKLCSGDKIEGAFPILNSSRKPCKAGAVLSLSIQYTP 189 (622)
Q Consensus 115 WNE-~f~~~-v~~~~-~~L~l~V~D~d~~~dd~IG~~~i~L~~l~~g~~~~~W~~L~~~~g~~~k~~G~I~L~l~f~p 189 (622)
||| +|.|. +..+. ..|+|.|||+| +++||++.+||+.|..|. ++++|.+..|.+. ..++|.+.+.+..
T Consensus 775 WnEe~F~F~~V~~pela~Lrf~V~D~d---ddfiG~~~lpL~~L~~Gy---R~vpL~~~~g~~l-~~atLfv~i~~~~ 845 (885)
T 3ohm_B 775 WDEEPFDFPKVVLPTLASLRIAAFEEG---GKFVGHRILPVSAIRSGY---HYVCLRNEANQPL-CLPALLIYTEASD 845 (885)
T ss_dssp CCCCCEEEEEESCGGGCEEEEEEEETT---TEEEEEEEEETTTCCCEE---EEEEEECTTSCEE-EEEEEEEEEEEEE
T ss_pred eccceeEEeeEEcCCcCEEEEEEEcCC---ccEEeeEEEEHHHcCCCc---eEEEecCCCCCcc-CceEEEEEEEEEe
Confidence 999 69998 65443 68999999987 899999999999998763 5789988888753 3457777777653
No 57
>2enj_A NPKC-theta, protein kinase C theta type; beta-sandwich, phosphotyrosine binding, TCR, T-cell, diacylglycerol, phorbol ester, structural genomics; NMR {Homo sapiens}
Probab=99.07 E-value=8.6e-10 Score=99.19 Aligned_cols=111 Identities=14% Similarity=0.217 Sum_probs=87.3
Q ss_pred eEEEEEEEEeecCCCCCccccccccccccccccccccccccCCCCCCCCcEEEEEECCEEE---eee-eeecCCCCCeee
Q 007000 41 GNLDIWVKEAKNLPNMDMFHKKIGDVFGKLNVKVTSKIESHLSDKITSDPYVTVSICGAVI---GRT-FVISNSESPVWM 116 (622)
Q Consensus 41 g~L~v~V~~A~~L~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~DPYv~V~l~~~~~---~kT-~vi~~t~nPvWN 116 (622)
+.|||++.++...+-+.. .....||||.|.++.... |+| .+.++|..|+||
T Consensus 10 ~flRi~l~~~~~~~~~~~-------------------------~~~~lDPY~aV~VdE~~~te~gqtl~~KkkT~~P~Wn 64 (138)
T 2enj_A 10 PFLRIGLSNFDCGSCQSC-------------------------QGEAVNPYCAVLVKEYVESENGQMYIQKKPTMYPPWD 64 (138)
T ss_dssp CCEEEEEEEEECCCCCCS-------------------------CCCCCCCEEEEEEEEEEEETTEEEEEEEEEEECCCSS
T ss_pred cceEEEeeccccCCCCCc-------------------------ccccCCceEEEEeeeeeeccCceeecccCCCCCcccc
Confidence 457999988776543210 023479999999998766 899 778889999999
Q ss_pred eEEEEecCCCCcEEEEEEEecCCcCCeeeEeEEEeceeec-----CCCeeeecccccCCCCCccccCceEEEEEEee
Q 007000 117 QHFNVPVAHSAAEVHFVVKDNDFVGSQIMGAVGIPVEKLC-----SGDKIEGAFPILNSSRKPCKAGAVLSLSIQYT 188 (622)
Q Consensus 117 E~f~~~v~~~~~~L~l~V~D~d~~~dd~IG~~~i~L~~l~-----~g~~~~~W~~L~~~~g~~~k~~G~I~L~l~f~ 188 (622)
|+|.-.+. ....|.|.|++... ++++.++|++++|. .+...+.|++|. + .|++++.++|.
T Consensus 65 e~Fd~~V~-~Gr~l~i~Vfh~a~---~fVAn~tV~~edL~~~ck~~~g~~e~WvdLe-P-------~Gkl~v~i~~~ 129 (138)
T 2enj_A 65 STFDAHIN-KGRVMQIIVKGKNV---DLISETTVELYSLAERCRKNNGKTEIWLELK-P-------QGRMLMNARYF 129 (138)
T ss_dssp SEEEECCC-SSCEEEEEEECSSC---SCCEEEEEESHHHHHHHHHTTTCEEEEEECB-S-------SCEEEEEEEEC
T ss_pred ceEeeeEE-CCeEEEEEEEcCCC---CeeeEEEEEHHHHHhhhccCCCceEEEEecc-c-------CcEEEEEEEEE
Confidence 99999886 44789999997554 89999999999998 345678999994 3 36789988885
No 58
>1yrk_A NPKC-delta, protein kinase C, delta type; C2 domain, protein binding; HET: PTR; 1.70A {Homo sapiens} PDB: 1bdy_A
Probab=99.06 E-value=2.3e-09 Score=95.19 Aligned_cols=90 Identities=19% Similarity=0.285 Sum_probs=74.2
Q ss_pred CCCcEEEEEECCEEEe---ee-eeecCCCCCeeeeEEEEecCCCCcEEEEEEEecCCcCCeeeEeEEEeceeec-----C
Q 007000 87 TSDPYVTVSICGAVIG---RT-FVISNSESPVWMQHFNVPVAHSAAEVHFVVKDNDFVGSQIMGAVGIPVEKLC-----S 157 (622)
Q Consensus 87 ~~DPYv~V~l~~~~~~---kT-~vi~~t~nPvWNE~f~~~v~~~~~~L~l~V~D~d~~~dd~IG~~~i~L~~l~-----~ 157 (622)
..||||.|.++....+ +| .+.++|..|+|||+|.-.+. ....|.|.|++... ++++.+++++++|. .
T Consensus 26 ~lDPy~aV~vdE~~~~e~g~t~~~K~kT~~P~Wne~Fd~~V~-~Gr~l~i~Vfh~a~---~fvAn~tV~~edL~~~c~~~ 101 (126)
T 1yrk_A 26 ANQPFCAVKMKEALSTERGKTLVQKKPTMYPEWKSTFDAHIY-EGRVIQIVLMRAAE---EPVSEVTVGVSVLAERCKKN 101 (126)
T ss_dssp SCCCEEEEEEEEEEEETTEEEEECCSCCBCCCTTCEEEEECC-TTCEEEEEEEEETT---EEEEEEEEEHHHHHHHHHTT
T ss_pred cCCceEEEEeeeeEEcccceeecccCCCCCcCccceEEeeee-CCEEEEEEEEcCCC---CeeeEEEEEHHHHHhhhccC
Confidence 4799999999876654 77 66777999999999999987 44789999997654 99999999999998 3
Q ss_pred CCeeeecccccCCCCCccccCceEEEEEEee
Q 007000 158 GDKIEGAFPILNSSRKPCKAGAVLSLSIQYT 188 (622)
Q Consensus 158 g~~~~~W~~L~~~~g~~~k~~G~I~L~l~f~ 188 (622)
+...+.|++|. + .|++++.++|.
T Consensus 102 ~g~~e~WvdLe-P-------~Gkl~~~i~~~ 124 (126)
T 1yrk_A 102 NGKAEFWLDLQ-P-------QAKVLMSVQYF 124 (126)
T ss_dssp TTEEEEEEECB-S-------SCEEEEEEEEE
T ss_pred CCceEEEEecc-c-------CcEEEEEEEEe
Confidence 45678999994 3 35788888875
No 59
>3hsi_A Phosphatidylserine synthase; CDP- diacylglycerol--serine O-phosphatidyltransferase, structura genomics, PSI-2; HET: MSE; 2.20A {Haemophilus influenzae}
Probab=99.05 E-value=4.4e-10 Score=123.13 Aligned_cols=147 Identities=16% Similarity=0.024 Sum_probs=100.8
Q ss_pred hHHHHHHHHHHhcccEEEEEEEeecceeeEEeCCCCchhHHHHHHhhhcCCCeEEEEEeCCCcccccccccccCccCCCh
Q 007000 250 SCWQDVYDAINQARRLIYITGWSVYHTVRLVRDGSNTLMLGDLLKIKSQEGVRVLILAWDDPTSRSILGYKTDGIMSTND 329 (622)
Q Consensus 250 ~~f~~l~~aI~~Ar~~I~I~~y~~~p~~~i~~~~~~g~~l~~~L~~aa~rGV~VriLv~D~~gs~~~~~~~~~~~~~~~~ 329 (622)
.....+.++|.+|+++|+|++.- +..+ ..+.++|+.|++|||+||||+ +...+.......+..+.....
T Consensus 258 ~i~~~~~~lI~~A~~~I~I~tpY------f~p~----~~~~~aL~~Aa~rGV~VrIi~-~~~~and~y~~~~~~~~~~~~ 326 (458)
T 3hsi_A 258 ELNQVIEDLFLQVQKKLVICTPY------FNFP----RTLQHKIATLLENGKRVEIIV-GDKVANDFYIPPEQPFKMAGA 326 (458)
T ss_dssp HHHHHHHHHHHTCSSEEEEECSS------SCCC----HHHHHHHHHHHTTTCEEEEEE-ECGGGSTTCCCTTSCCCGGGG
T ss_pred HHHHHHHHHHHhcccEEEEEEec------cCCC----HHHHHHHHHHHHCCCeEEEEE-CCccccCCccCCcchhhhhcc
Confidence 36889999999999999999763 3333 789999999999999999997 776422111000111111111
Q ss_pred -HHHH-----------hhhcCCC-eEEEecCCCCCCCcccccccccccccccccceEEEccCCccCcceeEEEEcccccC
Q 007000 330 -EETR-----------RFFKHSS-VQVLLCPRSAGKGHSFVKKQEVGTIYTHHQKTVVVDADAGQFKRKIIAFVGGLDLC 396 (622)
Q Consensus 330 -~~~~-----------~~l~~~g-v~v~~~~~~~~~~~~~~~~~~~~~~~r~HrK~vVIDg~~~~~~~~~vafvGG~Ni~ 396 (622)
+... ..+.++| +.|..+... .+..|.|.+|||+ ++++||+.|+.
T Consensus 327 ~~~lye~~~~~f~~~~~~l~~~G~i~V~i~~~~---------------~~~lHaK~~vvD~--------~~~~vGS~N~d 383 (458)
T 3hsi_A 327 LPYLYESNLRRFCEKFETQIESGQLVVRLWRDG---------------DNTYHLKGVWVDD--------RYILLTGNNLN 383 (458)
T ss_dssp HHHHHHHHHHHHHHHTHHHHHHTSEEEEEECBT---------------TBEECCCEEEETT--------TEEEEECCCCS
T ss_pred hHHHHHHhhhhhHHHHHHHHhCCCeEEEEEecC---------------CCceeEEEEEECC--------eEEEecCCCCC
Confidence 1111 1234566 445443211 2458999999999 89999999998
Q ss_pred CcccCCCCCCCccccccccCCCCCCCCCCCCCCCCCCCCceeeeeEEeCh---HHHHHHHHHHHHHhhcc
Q 007000 397 KGRYDTPAHPLFKTLETVHKDDYYNPSLLEPIAGGPREPWHDLHCRIDGP---AAYDILTNFEERWLKAS 463 (622)
Q Consensus 397 ~~~~d~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~D~~~ri~Gp---av~dl~~~F~~~W~~~~ 463 (622)
..-+.- =.++.+.|.+| .+.++...|.+.|....
T Consensus 384 ~RS~~l---------------------------------N~E~~~~i~~~~~~l~~~l~~~f~~~~~~s~ 420 (458)
T 3hsi_A 384 PRAWRL---------------------------------DAENGLLIYDPQQQLLAQVEKEQNQIRQHTK 420 (458)
T ss_dssp HHHHHT---------------------------------CEEEEEEEECTTCSSHHHHHHHHHHHHTTEE
T ss_pred cchhhh---------------------------------CceeEEEEeCCcHHHHHHHHHHHHHHHHhCe
Confidence 644321 14789999998 79999999999998653
No 60
>1v0w_A Phospholipase D; hydrolase, substrate SOAK, dibutyrylphosphatidylcholine, DIC4PC; 1.35A {Streptomyces SP} SCOP: d.136.1.2 d.136.1.2 PDB: 1v0s_A 1v0r_A 1v0t_A 1v0v_A 1v0u_A 1v0y_A* 1f0i_A 2ze4_A* 2ze9_A*
Probab=98.82 E-value=2.1e-08 Score=111.32 Aligned_cols=159 Identities=21% Similarity=0.253 Sum_probs=94.4
Q ss_pred hHHHHHHHHHHhcccEEEEEEEeecceeeEEeCCCCchhHHHHHHhhhcCCCeEEEEEeCCCcccccccccccCccCCCh
Q 007000 250 SCWQDVYDAINQARRLIYITGWSVYHTVRLVRDGSNTLMLGDLLKIKSQEGVRVLILAWDDPTSRSILGYKTDGIMSTND 329 (622)
Q Consensus 250 ~~f~~l~~aI~~Ar~~I~I~~y~~~p~~~i~~~~~~g~~l~~~L~~aa~rGV~VriLv~D~~gs~~~~~~~~~~~~~~~~ 329 (622)
.....+.++|.+||++|+|++-.|.|. +.+.......+.++|++|++|||+||||+ +......+..+.........
T Consensus 314 ~~~~~~~~~I~~A~~~I~I~tq~~~py--f~p~~~~~~~i~~aL~~Aa~rGV~VrIl~-~~~~~~~~~~~a~~~~~~~L- 389 (506)
T 1v0w_A 314 PEESALRALVASAKGHIEISQQDLNAT--CPPLPRYDIRLYDALAAKMAAGVKVRIVV-SDPANRGAVGSGGYSQIKSL- 389 (506)
T ss_dssp HHHHHHHHHHHTCSSEEEEEESCSSCC--TTTSCSCCHHHHHHHHHHHHTTCEEEEEE-CCGGGCC------CCCCSCT-
T ss_pred cHHHHHHHHHhCcCcEEEEEecccccc--ccCcccchHHHHHHHHHHHhCCCcEEEEe-CCCCchHHHHHhHHHHHHHH-
Confidence 368999999999999999997433321 22221224789999999999999999997 65431111000000000000
Q ss_pred HHH------HhhhcCC-----------CeEEEecCCCCCCCcccccccccccccccccceEEEccCCccCcceeEEEEcc
Q 007000 330 EET------RRFFKHS-----------SVQVLLCPRSAGKGHSFVKKQEVGTIYTHHQKTVVVDADAGQFKRKIIAFVGG 392 (622)
Q Consensus 330 ~~~------~~~l~~~-----------gv~v~~~~~~~~~~~~~~~~~~~~~~~r~HrK~vVIDg~~~~~~~~~vafvGG 392 (622)
.+. ...+.++ ++++..+... + .+.|. .+.....|.|++|||+ +++++|+
T Consensus 390 ~~~~~~l~~gv~ll~~g~~e~~~~~~~~l~i~~~~~~-~-~~~~~----~~~~~~lHaK~~vvD~--------~~~~vGS 455 (506)
T 1v0w_A 390 SEISDTLRNRLANITGGQQAAKTAMCSNLQLATFRSS-P-NGKWA----DGHPYAQHHKLVSVDS--------STFYIGS 455 (506)
T ss_dssp HHHHHHHHHHHHHHHTSHHHHHHHHHHHEEEEECCSS-S-SSSCT----TSCCCCBCCEEEEETT--------TEEEEES
T ss_pred HHhhhhhcccchhcccccchhccccccceeeeecccc-C-ccccc----cCccccceEEEEEECC--------cEEEEeC
Confidence 000 0001111 2344222100 0 00010 0112469999999999 8999999
Q ss_pred cccCCcccCCCCCCCccccccccCCCCCCCCCCCCCCCCCCCCceeeeeEEeCh-HHHHHHHHHHHH-Hhhc
Q 007000 393 LDLCKGRYDTPAHPLFKTLETVHKDDYYNPSLLEPIAGGPREPWHDLHCRIDGP-AAYDILTNFEER-WLKA 462 (622)
Q Consensus 393 ~Ni~~~~~d~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~D~~~ri~Gp-av~dl~~~F~~~-W~~~ 462 (622)
.|+.... ++++.+.|++| .+.++...|.++ |+..
T Consensus 456 ~N~d~rS------------------------------------~~E~~l~i~~~~~a~~l~~~f~~~~w~~s 491 (506)
T 1v0w_A 456 KNLYPSW------------------------------------LQDFGYIVESPEAAKQLDAKLLDPQWKYS 491 (506)
T ss_dssp CCSSCCC------------------------------------SBCEEEEEECHHHHHHHHHHTHHHHHHHH
T ss_pred CCCCCcc------------------------------------hhhceeEecCHHHHHHHHHHHHHHHHhhc
Confidence 9995421 24889999997 488999999975 7754
No 61
>1xdp_A Polyphosphate kinase; PPK, PPK complex with AMPPNP, AMPPNP, transferase; HET: ATP; 2.50A {Escherichia coli} SCOP: a.7.15.1 d.322.1.2 d.136.1.4 d.136.1.4 PDB: 1xdo_A*
Probab=97.76 E-value=0.0001 Score=84.15 Aligned_cols=132 Identities=17% Similarity=0.176 Sum_probs=86.8
Q ss_pred HHHHHHHHHhccc----EEEEEEEeecceeeEEeCCCCchhHHHHHHhhhcCCCeEEEEEeCCCcccccccccccCccCC
Q 007000 252 WQDVYDAINQARR----LIYITGWSVYHTVRLVRDGSNTLMLGDLLKIKSQEGVRVLILAWDDPTSRSILGYKTDGIMST 327 (622)
Q Consensus 252 f~~l~~aI~~Ar~----~I~I~~y~~~p~~~i~~~~~~g~~l~~~L~~aa~rGV~VriLv~D~~gs~~~~~~~~~~~~~~ 327 (622)
...+.+.|+.|++ +|+|.++. +.+ ..+.++|.+|++|||+|+||+ ++.-+. .+|.
T Consensus 514 ~~~I~~ei~~A~~g~~~~I~i~~~~-------lpD----~~ii~AL~~Aa~rGV~VrLiv-rg~c~l-~pgv-------- 572 (687)
T 1xdp_A 514 YEMVDREIANAQQGLPSGITLKLNN-------LVD----KGLVDRLYAASSSGVPVNLLV-RGMCSL-IPNL-------- 572 (687)
T ss_dssp HHHHHHHHHHHHTTCCCCEEEEESC-------BCC----HHHHHHHHHHHHTTCCEEEEE-SSCBCB-CTTC--------
T ss_pred HHHHHHHHHHHHcCCCCEEEEEeCC-------CCC----HHHHHHHHHHHHCCCEEEEEE-eccccc-CCCC--------
Confidence 4445556777876 89998872 233 889999999999999999998 654221 1110
Q ss_pred ChHHHHhhhcCCCeEEEecCCCCCCCcccccccccccccccccceEEEccCCccCcceeEEEEcccccCCcccCCCCCCC
Q 007000 328 NDEETRRFFKHSSVQVLLCPRSAGKGHSFVKKQEVGTIYTHHQKTVVVDADAGQFKRKIIAFVGGLDLCKGRYDTPAHPL 407 (622)
Q Consensus 328 ~~~~~~~~l~~~gv~v~~~~~~~~~~~~~~~~~~~~~~~r~HrK~vVIDg~~~~~~~~~vafvGG~Ni~~~~~d~~~H~~ 407 (622)
+. ...++.|+-+-. . +-.|-|+...... ...++|+|+.||....++.
T Consensus 573 --p~-----~sdni~V~s~~~------r----------~Leh~rI~~f~~~-----dd~~~~IGSAN~d~Rsl~~----- 619 (687)
T 1xdp_A 573 --EG-----ISDNIRAISIVD------R----------YLEHDRVYIFENG-----GDKKVYLSSADWMTRNIDY----- 619 (687)
T ss_dssp --TT-----TSTTEEEEEECS------S----------SEECCCEEEECGG-----GSCEEEEESCCBSHHHHHS-----
T ss_pred --CC-----CCCCEEEEEehh------H----------HhhCCeEEEEcCC-----CCCEEEEEcCccchhhhhh-----
Confidence 00 123455532210 1 1246699998431 0179999999998755532
Q ss_pred ccccccccCCCCCCCCCCCCCCCCCCCCceeeeeEEeChH-HHHHHHHHHHHHhhccCC
Q 007000 408 FKTLETVHKDDYYNPSLLEPIAGGPREPWHDLHCRIDGPA-AYDILTNFEERWLKASKP 465 (622)
Q Consensus 408 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~D~~~ri~Gpa-v~dl~~~F~~~W~~~~~~ 465 (622)
-..+.+.|..|. +.+|...|...|......
T Consensus 620 ----------------------------n~Ev~~~I~d~~~~~~l~~~f~~~l~d~~~a 650 (687)
T 1xdp_A 620 ----------------------------RIEVATPLLDPRLKQRVLDIIDILFSDTVKA 650 (687)
T ss_dssp ----------------------------EEEEEEECCSHHHHHHHHHHHHHHHTCCSSE
T ss_pred ----------------------------heeeeEEecCHHHHHHHHHHHHHhhcccccc
Confidence 257888888855 888999999999976543
No 62
>2o8r_A Polyphosphate kinase; structural genomics, protein structure initiative, PSI, nysgrc, NEW YORK structural genomics research consortium; HET: MSE; 2.70A {Porphyromonas gingivalis} SCOP: a.7.15.1 d.322.1.2 d.136.1.4 d.136.1.4
Probab=97.70 E-value=0.00017 Score=81.87 Aligned_cols=137 Identities=13% Similarity=0.126 Sum_probs=98.6
Q ss_pred CccccchhHHHHHHHHHHhccc----EEEEEEEeecceeeEEeCCCCchhHHHHHHhhhcCCCeEEEEEeCCCccccccc
Q 007000 243 GVQFNHESCWQDVYDAINQARR----LIYITGWSVYHTVRLVRDGSNTLMLGDLLKIKSQEGVRVLILAWDDPTSRSILG 318 (622)
Q Consensus 243 ~~~~~~~~~f~~l~~aI~~Ar~----~I~I~~y~~~p~~~i~~~~~~g~~l~~~L~~aa~rGV~VriLv~D~~gs~~~~~ 318 (622)
|+..+.+.+...+.++|.+|++ +|+|.+-. +.+ ..+.++|..|+++||+|+||+ .+.-+. .|+
T Consensus 512 sP~~~~~~i~~~i~~eI~~Ak~G~~a~I~ik~n~-------l~D----~~ii~aL~~As~~GV~V~LIV-RGiC~L-~Pg 578 (705)
T 2o8r_A 512 ARYNMGEAITNLIEREIENVKRGKRGYMLLKMNG-------LQD----KNVITQLYRASEAGVEIDLIV-RGICCL-VPD 578 (705)
T ss_dssp TTTTHHHHHHHHHHHHHHHHHTTCCCEEEEEESC-------BCC----HHHHHHHHHHHHTTCEEEEEE-SSCBCS-CCS
T ss_pred CCchHHHHHHHHHHHHHHHHhcCCCCEEEEEcCC-------CCC----HHHHHHHHHHHHCCCeEEEEE-cccccc-CCC
Confidence 6667777789999999999998 99998862 233 889999999999999999998 544221 121
Q ss_pred ccccCccCCChHHHHhhhcCCCeEEEecCCCCCCCcccccccccccccccccceEEE---ccCCccCcceeEEEEccccc
Q 007000 319 YKTDGIMSTNDEETRRFFKHSSVQVLLCPRSAGKGHSFVKKQEVGTIYTHHQKTVVV---DADAGQFKRKIIAFVGGLDL 395 (622)
Q Consensus 319 ~~~~~~~~~~~~~~~~~l~~~gv~v~~~~~~~~~~~~~~~~~~~~~~~r~HrK~vVI---Dg~~~~~~~~~vafvGG~Ni 395 (622)
.. ...++.|+-+-. .+ -.|-|+.+. |+ ..+|+|+.||
T Consensus 579 --------------v~--~sdni~V~Sivg------r~----------Leh~RIy~f~~gd~--------~~~~IGSAn~ 618 (705)
T 2o8r_A 579 --------------MP--QSRNIRVTRLVD------MY----------LEHSRIWCFHNGGK--------EEVFISSADW 618 (705)
T ss_dssp --------------SG--GGTTEEEEECCS------SS----------EECCCEEEECGGGS--------CEEEEESCCB
T ss_pred --------------CC--CCCCeEEEeeHH------HH----------HhcCEEEEEECCCC--------cEEEEecccc
Confidence 00 123455533200 11 146699999 54 7999999999
Q ss_pred CCcccCCCCCCCccccccccCCCCCCCCCCCCCCCCCCCCceeeeeEEeChH-HHHHHHHHHHHHhhccCC
Q 007000 396 CKGRYDTPAHPLFKTLETVHKDDYYNPSLLEPIAGGPREPWHDLHCRIDGPA-AYDILTNFEERWLKASKP 465 (622)
Q Consensus 396 ~~~~~d~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~D~~~ri~Gpa-v~dl~~~F~~~W~~~~~~ 465 (622)
....++. -..+.+-|..|. +..|...|..+|....+.
T Consensus 619 m~Rnl~~---------------------------------r~Ev~~~i~d~~~~~~l~~i~~~~l~d~~~a 656 (705)
T 2o8r_A 619 MKRNLYN---------------------------------RIETACPVLDPTLRREIIDILEIQLRDNIKA 656 (705)
T ss_dssp CHHHHHT---------------------------------SBCEEEECCSHHHHHHHHHHHHHHHHCCSSC
T ss_pred chhhhhh---------------------------------eeEEEEEEcCHHHHHHHHHHHHHhhhhhhce
Confidence 8755542 147788888865 888999999999987654
No 63
>3qph_A TRMB, A global transcription regulator; transcriptional regulator; HET: SUC; 2.99A {Pyrococcus furiosus}
Probab=95.59 E-value=0.012 Score=61.77 Aligned_cols=46 Identities=13% Similarity=0.075 Sum_probs=39.6
Q ss_pred HHHHHHHHHHhcccEEEEEEEeecceeeEEeCCCCchhHHHHHHhhhcCCCeEEEEE
Q 007000 251 CWQDVYDAINQARRLIYITGWSVYHTVRLVRDGSNTLMLGDLLKIKSQEGVRVLILA 307 (622)
Q Consensus 251 ~f~~l~~aI~~Ar~~I~I~~y~~~p~~~i~~~~~~g~~l~~~L~~aa~rGV~VriLv 307 (622)
....+.+.|.+|+++|++..+. . .-..+.+.|.+|++|||+|++|+
T Consensus 120 I~~ri~eli~~A~~eI~i~~~~---~--------~l~~l~~~L~~a~~RGV~Vrvi~ 165 (342)
T 3qph_A 120 AIEMFRESLYSAKNEVIVVTPS---E--------FFETIREDLIKTLERGVTVSLYI 165 (342)
T ss_dssp HHHHHHHHHHHCSSEEEEEECH---H--------HHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHHhhheEEEEEeCH---H--------HHHHHHHHHHHHHhCCCEEEEEE
Confidence 7899999999999999999861 1 12678899999999999999996
No 64
>2f5t_X Archaeal transcriptional regulator TRMB; sugar-binding; HET: MAL; 1.45A {Thermococcus litoralis} SCOP: b.38.5.1 d.136.1.5
Probab=94.55 E-value=0.041 Score=54.41 Aligned_cols=49 Identities=10% Similarity=0.030 Sum_probs=42.1
Q ss_pred hHHHHHHHHHHhcccEEEEEEEeecceeeEEeCCCCchhHHHHHHhhhcCCCeEEEEEeC
Q 007000 250 SCWQDVYDAINQARRLIYITGWSVYHTVRLVRDGSNTLMLGDLLKIKSQEGVRVLILAWD 309 (622)
Q Consensus 250 ~~f~~l~~aI~~Ar~~I~I~~y~~~p~~~i~~~~~~g~~l~~~L~~aa~rGV~VriLv~D 309 (622)
+....+.+.|++|+++|+++.| . +.-..|.+.|.+|.+|||.|+|+++.
T Consensus 10 ~Ii~r~~e~I~~A~~el~lsi~----------~-e~l~~l~~~L~~A~~rGV~V~liv~~ 58 (233)
T 2f5t_X 10 EAIEMFRESLYSAKNEVIVVTP----------S-EFFETIREDLIKTLERGVTVSLYIDK 58 (233)
T ss_dssp HHHHHHHHHHHTCSSEEEEEEC----------G-GGHHHHHHHHHHHHHTTCEEEEEESS
T ss_pred HHHHHHHHHHHHhhhEEEEEeC----------H-HHHHHHHHHHHHHHHCCCEEEEEEcC
Confidence 3789999999999999999877 1 22378999999999999999999843
No 65
>1byr_A Protein (endonuclease); phosphodiesterase,; 2.00A {Salmonella typhimurium} SCOP: d.136.1.1 PDB: 1bys_A
Probab=92.56 E-value=0.04 Score=50.07 Aligned_cols=48 Identities=19% Similarity=0.084 Sum_probs=35.8
Q ss_pred hHHHHHHHHHHHHccceEEEEeccccccccCcccc----cCcCCcccCchhh
Q 007000 543 MSIHTAYVKAIRAAQHFIYIENQYFLGSSFNWDSH----RDLGESICDNEQM 590 (622)
Q Consensus 543 ~~I~~ay~~aI~~A~~~IyIenqYFip~~~~~~~~----~~~~~~~~~~~~~ 590 (622)
.++.+.++++|.+|+++|+|+++||..+....++. |++.++++++...
T Consensus 13 ~~~~~~~~~~i~~A~~~I~i~~~~~~~~~i~~aL~~a~~rGV~Vril~~~~~ 64 (155)
T 1byr_A 13 GSARVLVLSAIDSAKTSIRMMAYSFTAPDIMKALVAAKKRGVDVKIVIDERG 64 (155)
T ss_dssp THHHHHHHHHHHHCSSEEEEEESSBCCHHHHHHHHHHHHTTCEEEEEEESTT
T ss_pred CcHHHHHHHHHHHHhhEEEEEEEEeCCHHHHHHHHHHHHCCCEEEEEEeCcc
Confidence 47899999999999999999999994333322222 6677777777653
No 66
>4ggj_A Mitochondrial cardiolipin hydrolase; piRNA pathway, protein-RNA interactions, piRNA RNAI, HKD MOT zinc finger, nuclease, nucleic acid binding; 1.75A {Mus musculus} PDB: 4ggk_A
Probab=86.88 E-value=0.17 Score=48.44 Aligned_cols=42 Identities=14% Similarity=0.078 Sum_probs=33.0
Q ss_pred HHHHHHHHHHHHccceEEEEeccccccccCcccc-----cCcCCcccC
Q 007000 544 SIHTAYVKAIRAAQHFIYIENQYFLGSSFNWDSH-----RDLGESICD 586 (622)
Q Consensus 544 ~I~~ay~~aI~~A~~~IyIenqYFip~~~~~~~~-----~~~~~~~~~ 586 (622)
+....++++|.+|+++|+|+. |++++..+.++| |++.|++++
T Consensus 46 ~~~~~ll~~I~~A~~sI~i~~-y~~~~~~i~~aL~~aa~rGV~Vrii~ 92 (196)
T 4ggj_A 46 SSLSRLLRALLAARSSLELCL-FAFSSPQLGRAVQLLHQRGVRVRVIT 92 (196)
T ss_dssp CHHHHHHHHHHTCSSEEEEEE-SCBCCHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHHHHhheEEEEEE-EEeCCHHHHHHHHHHHHcCCcEEEEE
Confidence 567789999999999999998 777766555544 777777766
No 67
>2wxf_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit delta isoform; transferase, phosphoprotein, isoform-specific inhibitors; HET: 039; 1.90A {Mus musculus} PDB: 2wxg_A* 2wxh_A* 2wxi_A* 2wxj_A* 2wxk_A* 2wxl_A* 2wxm_A* 2wxn_A* 2wxo_A* 2wxp_A* 2wxq_A* 2wxr_A 2x38_A*
Probab=85.96 E-value=3.4 Score=48.67 Aligned_cols=85 Identities=11% Similarity=0.137 Sum_probs=55.6
Q ss_pred ceEEEEEEEEeecCCCCCccccccccccccccccccccccccCCCCCCCCcEEEEEE--CCEEEe---eeeeecCCCCCe
Q 007000 40 HGNLDIWVKEAKNLPNMDMFHKKIGDVFGKLNVKVTSKIESHLSDKITSDPYVTVSI--CGAVIG---RTFVISNSESPV 114 (622)
Q Consensus 40 ~g~L~v~V~~A~~L~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~DPYv~V~l--~~~~~~---kT~vi~~t~nPv 114 (622)
...|+|+|.++.++...+ ..+-||.+.+ |++..+ .|+.+.-+.+|.
T Consensus 216 ~~~f~i~i~~~~~~~~~~-----------------------------~~~~~V~~~l~~g~~~l~~~~~T~~~~~~~~~~ 266 (940)
T 2wxf_A 216 EQPFSIELIEGRKVNADE-----------------------------RMKLVVQAGLFHGNEMLCKTVSSSEVNVCSEPV 266 (940)
T ss_dssp CSEEEEEEEEEECCCC--------------------------------CEEEEEEEEEETTEESSCCEECCCEESCSSCE
T ss_pred CCceEEEEEEecccCCCC-----------------------------CceEEEEEEEEECCEEccCceecccccCCCCcc
Confidence 467999999999987432 2567887776 554332 344444477899
Q ss_pred eeeEEEEec--CC--CCcEEEEEEEecCCc--C-----------CeeeEeEEEece
Q 007000 115 WMQHFNVPV--AH--SAAEVHFVVKDNDFV--G-----------SQIMGAVGIPVE 153 (622)
Q Consensus 115 WNE~f~~~v--~~--~~~~L~l~V~D~d~~--~-----------dd~IG~~~i~L~ 153 (622)
|||.++|++ .+ ....|.|+||+.... + ...||.+.++|-
T Consensus 267 Wne~l~f~i~i~dLPr~a~L~~ti~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~lF 322 (940)
T 2wxf_A 267 WKQRLEFDISVCDLPRMARLCFALYAVVEKAKKARSTKKKSKKADCPIAWANLMLF 322 (940)
T ss_dssp EEEEEEEEEEGGGCCTTCEEEEEEEEEC----------------CEEEEEEEEESB
T ss_pred cceEEEcccccccCCcccEEEEEEEEecCCccCccccccccccccceEEEEeeeEE
Confidence 999766654 33 347899999985321 1 247787777763
No 68
>4gel_A Mitochondrial cardiolipin hydrolase; piRNA, phospholipase D, nuclease; 1.76A {Drosophila melanogaster} PDB: 4gem_A 4gen_A
Probab=83.98 E-value=0.34 Score=46.67 Aligned_cols=45 Identities=24% Similarity=0.132 Sum_probs=35.9
Q ss_pred hHHHHHHHHHHHHccceEEEEeccccccccCcccc-----cCcCCcccCch
Q 007000 543 MSIHTAYVKAIRAAQHFIYIENQYFLGSSFNWDSH-----RDLGESICDNE 588 (622)
Q Consensus 543 ~~I~~ay~~aI~~A~~~IyIenqYFip~~~~~~~~-----~~~~~~~~~~~ 588 (622)
....+.++++|.+|+++|+|+. |++++..+.++| |++.|++++..
T Consensus 57 ~~~~~~ii~~I~~A~~sI~i~~-Y~~~~~~I~~aL~~Aa~RGV~VRii~D~ 106 (220)
T 4gel_A 57 LRNVAKIVEQIDRAVYSIDLAI-YTFTSLFLADSIKRALQRGVIIRIISDG 106 (220)
T ss_dssp HHHHHHHHHHHHTCSSEEEEEC-SCBCCHHHHHHHHHHHHHTCEEEEECCT
T ss_pred HHHHHHHHHHHHHhhhEEEEEE-EEeCCHHHHHHHHHHHHcCCeEEEEEec
Confidence 3566778999999999999997 888877666654 77888887743
No 69
>3l4c_A Dedicator of cytokinesis protein 1; DOCK180, DOCK1, phosphoinositide specificity, guanine exchan factor, RHO GTPase, cytoskeleton, cell migration; 2.37A {Homo sapiens}
Probab=82.77 E-value=3.2 Score=40.29 Aligned_cols=38 Identities=11% Similarity=0.371 Sum_probs=30.1
Q ss_pred eeeeeecCCCCCeeeeEEEEecCCC---CcEEEEEEEecCC
Q 007000 102 GRTFVISNSESPVWMQHFNVPVAHS---AAEVHFVVKDNDF 139 (622)
Q Consensus 102 ~kT~vi~~t~nPvWNE~f~~~v~~~---~~~L~l~V~D~d~ 139 (622)
.+|.|...+.+|.|+|++.+.++.. ..-|.|++++...
T Consensus 79 ~~S~V~YHnk~P~w~EtIKi~LP~~~~~~~HLlFtFrH~S~ 119 (220)
T 3l4c_A 79 YKSVIYYQVKQPRWFETVKVAIPIEDVNRSHLRFTFRHRSS 119 (220)
T ss_dssp EECCCCTTCSSCCCCEEEEEEECTTSSTTEEEEEEEEECCC
T ss_pred EEEEEEEcCCCCCceEeEEEeeChhhcCCeEEEEEEEEecc
Confidence 4888888899999999998877543 2678899987553
No 70
>3hhm_A Phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha isoform; PI3KCA, PI3K, PIK3R1, phosphatidilynositol 3,4,5- triphosphate, wortmannin, H1047R, ATP-binding, disease mutation, kinase; HET: KWT; 2.80A {Homo sapiens} PDB: 3hiz_A 2rd0_A 4a55_A* 2enq_A
Probab=79.09 E-value=4.9 Score=47.84 Aligned_cols=87 Identities=16% Similarity=0.107 Sum_probs=56.0
Q ss_pred ceEEEEEEEEeecCCCCCccccccccccccccccccccccccCCCCCCCCcEEEEEE--CCEEEe---eeeeecCCCCCe
Q 007000 40 HGNLDIWVKEAKNLPNMDMFHKKIGDVFGKLNVKVTSKIESHLSDKITSDPYVTVSI--CGAVIG---RTFVISNSESPV 114 (622)
Q Consensus 40 ~g~L~v~V~~A~~L~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~DPYv~V~l--~~~~~~---kT~vi~~t~nPv 114 (622)
...|+|+|..+.++.... +...+-||.+.+ |++... +|+. ....+|.
T Consensus 354 ~~~f~v~i~~~~~~n~~~---------------------------~~~~~~~V~~~l~hG~~~L~~~~~T~~-~~~~~~~ 405 (1091)
T 3hhm_A 354 NSALRIKILCATYVNVNI---------------------------RDIDKIYVRTGIYHGGEPLCDNVNTQR-VPCSNPR 405 (1091)
T ss_dssp CSEEEEEEEEESCCCCCC---------------------------SSCCCCCEEEEEESSSCSSCCEECCCC-CCTTSCE
T ss_pred CCCEEEEEEEecCCCCCc---------------------------cccceEEEEEEEEECCEEccCceeccc-cCCCCCC
Confidence 457999999999886322 122567888887 443321 3332 3356788
Q ss_pred eeeEEEEe--cCC--CCcEEEEEEEecCCcC-----CeeeEeEEEecee
Q 007000 115 WMQHFNVP--VAH--SAAEVHFVVKDNDFVG-----SQIMGAVGIPVEK 154 (622)
Q Consensus 115 WNE~f~~~--v~~--~~~~L~l~V~D~d~~~-----dd~IG~~~i~L~~ 154 (622)
|||.++|+ +.+ ....|.|+||+....+ ...||.+.++|-+
T Consensus 406 Wne~l~f~i~i~dLPr~arL~~tl~~~~~~~~~~~~~~~lg~~n~~lfd 454 (1091)
T 3hhm_A 406 WNEWLNYDIYIPDLPRAARLCLSICSVKGRKGAKEEHCPLAWGNINLFD 454 (1091)
T ss_dssp EEEEEEEEEEGGGCCTTCEEEEEECCCCCCC-------CCEEEEEESBC
T ss_pred CCeeEEecCccccCChhcEEEEEEEEecCccCcccccceeEEeeeeeEc
Confidence 99966655 433 3478999999865421 3479999998843
No 71
>2yrb_A Protein fantom; beta sandwich, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.7.1.1
Probab=75.81 E-value=8.2 Score=35.39 Aligned_cols=100 Identities=9% Similarity=0.057 Sum_probs=64.4
Q ss_pred CCcE--EEEEECCEEEeeeeeecCCCCCeeeeEEEEecCCC--------CcEEEEEEEecCCcCCeeeEeEEEeceeecC
Q 007000 88 SDPY--VTVSICGAVIGRTFVISNSESPVWMQHFNVPVAHS--------AAEVHFVVKDNDFVGSQIMGAVGIPVEKLCS 157 (622)
Q Consensus 88 ~DPY--v~V~l~~~~~~kT~vi~~t~nPvWNE~f~~~v~~~--------~~~L~l~V~D~d~~~dd~IG~~~i~L~~l~~ 157 (622)
.+|+ |.+.+-+-+...|.++. +.+|.+|-+-.+.+.-. ...+.|.++.-....-..||.+.|+|.+|..
T Consensus 40 ~~p~tF~t~dF~dfEtq~Tpv~~-G~~p~y~fts~Y~V~~d~~fl~yL~~~~l~lELhqa~g~~~~tla~~~I~l~~lLe 118 (156)
T 2yrb_A 40 KEPVTFCTYAFYDFELQTTPVVR-GLHPEYNFTSQYLVHVNDLFLQYIQKNTITLEVHQAYSTEYETIAACQLKFHEILE 118 (156)
T ss_dssp SCCEEEEEECSTTCCCEECCCEE-SSSCCCCEEEEEEECCSHHHHHHHHHCCEEEEEEEECSSCEEEEEEEEECCSHHHH
T ss_pred cCCcEEEEEEEeceEeeeccccc-CCCCCcceEEEEEEEeCHHHHHHHhcCCEEEEEEEeeCCCceEEEEEEEEhHHhhC
Confidence 4665 44444444443666666 89999999766655321 1357777766432224699999999999884
Q ss_pred C-CeeeecccccCCCCCccccCceEEEEEEeec
Q 007000 158 G-DKIEGAFPILNSSRKPCKAGAVLSLSIQYTP 189 (622)
Q Consensus 158 g-~~~~~W~~L~~~~g~~~k~~G~I~L~l~f~p 189 (622)
. .....-.+|....|... .-|++.+.+++..
T Consensus 119 ~~~~i~g~~~L~g~~g~~~-~~G~LeywiRL~~ 150 (156)
T 2yrb_A 119 KSGRIFCTASLIGTKGDIP-NFGTVEYWFRLRV 150 (156)
T ss_dssp CCSCEEEEEEECBSSSCCT-TSEEEEEEEEEEE
T ss_pred cCCceEEEEEEEcCCCCcc-eEEEEEEEEEEec
Confidence 3 33555668877666321 3478998888763
No 72
>1e7u_A Phosphatidylinositol 3-kinase catalytic subunit; phosphoinositide 3-kinase gamma, secondary messenger generation, PI3K, PI 3K, wortmannin; HET: KWT; 2.0A {Sus scrofa} SCOP: a.118.1.6 b.7.1.1 d.15.1.5 d.144.1.4 PDB: 1e8x_A* 1e8w_A* 1e7v_A* 1e90_A* 3l54_A* 3s2a_A* 3qaq_A* 3qjz_A* 3qk0_A* 3qar_A* 3apc_A* 3apd_A* 3apf_A* 3dbs_A* 3l13_A* 3r7q_A* 3cst_A* 3csf_A* 3l16_A* 3l17_A* ...
Probab=68.40 E-value=19 Score=42.40 Aligned_cols=67 Identities=15% Similarity=0.171 Sum_probs=41.4
Q ss_pred CCcEEEEEE--CCEEEe--eeeeecCCCCCeeeeEEEEe--cCC--CCcEEEEEEEecCCcC-----------------C
Q 007000 88 SDPYVTVSI--CGAVIG--RTFVISNSESPVWMQHFNVP--VAH--SAAEVHFVVKDNDFVG-----------------S 142 (622)
Q Consensus 88 ~DPYv~V~l--~~~~~~--kT~vi~~t~nPvWNE~f~~~--v~~--~~~~L~l~V~D~d~~~-----------------d 142 (622)
++-||.+.+ |++... +|+-+.-+.+|.|||.++|+ +.+ ....|.|+||+....+ .
T Consensus 238 ~~~~V~~~l~~G~~~l~~~~t~~~~~~~~~~Wne~l~f~i~i~dLPr~a~L~~ti~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (961)
T 1e7u_A 238 LTVFVEANIQYGQQVLCQRRTSPKPFTEEVLWNVWLEFSIKIKDLPKGALLNLQIYCGAKPALSGKTSAEMPSPESKGKA 317 (961)
T ss_dssp EEEEEEEEEEETTEEEEEEECCCEECCSEEEEEEEEEEEEEGGGCCTTCEEEEEEEEEEC--------------------
T ss_pred ceEEEEEEEEECCEEcccceeeccccCCCcccceeEEeccccccCCcccEEEEEEEecccCccccccccccccccccccc
Confidence 466877666 554443 34444446789999976665 433 3478999999743211 2
Q ss_pred eeeEeEEEecee
Q 007000 143 QIMGAVGIPVEK 154 (622)
Q Consensus 143 d~IG~~~i~L~~ 154 (622)
..||.+.++|-+
T Consensus 318 ~~lg~~n~~lfd 329 (961)
T 1e7u_A 318 QLLYYVNLLLID 329 (961)
T ss_dssp CEEEEEEEESBC
T ss_pred eeEEEEeeeeec
Confidence 368888887743
No 73
>2y3a_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit beta isoform; transferase, phosphoinositide 3-kinase, RTK; HET: GD9; 3.30A {Mus musculus}
Probab=63.04 E-value=5.6 Score=47.49 Aligned_cols=69 Identities=14% Similarity=0.244 Sum_probs=45.9
Q ss_pred ceEEEEEEEEeecCCCCCccccccccccccccccccccccccCCCCCCCCcEEEEEE--CCEEEe---eeeeecCCCCCe
Q 007000 40 HGNLDIWVKEAKNLPNMDMFHKKIGDVFGKLNVKVTSKIESHLSDKITSDPYVTVSI--CGAVIG---RTFVISNSESPV 114 (622)
Q Consensus 40 ~g~L~v~V~~A~~L~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~DPYv~V~l--~~~~~~---kT~vi~~t~nPv 114 (622)
...|+|+|..+.++...+ ..+-||.+.+ |++..+ +|+.+.-+.+|.
T Consensus 352 ~~~f~i~i~~~~~~~~~~-----------------------------~~~~~V~~~l~~g~~~L~~~~~T~~~~~~~~~~ 402 (1092)
T 2y3a_A 352 NNPFQITLVKGNKLNTEE-----------------------------TVKVHVRAGLFHGTELLCKTVVSSEISGKNDHI 402 (1092)
T ss_dssp CSEEEEEECCCCCCCCCS-----------------------------SCCCCCBCCEEETTEESSCCCBCCCCCSSSCCC
T ss_pred CCCEEEEEEEeccCCCCC-----------------------------CceEEEEEEEEECCEEccCceecccccCCCCCc
Confidence 467999999999886432 2456666554 554432 344444477899
Q ss_pred eeeEEEEec--CC--CCcEEEEEEEec
Q 007000 115 WMQHFNVPV--AH--SAAEVHFVVKDN 137 (622)
Q Consensus 115 WNE~f~~~v--~~--~~~~L~l~V~D~ 137 (622)
|||.++|++ .+ ....|.|+||+.
T Consensus 403 Wnewl~f~i~~~dLPr~a~L~~ti~~~ 429 (1092)
T 2y3a_A 403 WNEQLEFDINICDLPRMARLCFAVYAV 429 (1092)
T ss_dssp CCEEEEEEEESSSCCTTCEEEEECCCC
T ss_pred cceeEEeCCccccCChhcEEEEEEEEe
Confidence 999766654 33 247899999885
No 74
>2c1l_A Restriction endonuclease; BFII, domain fusion, hydrolase; HET: TAR TLA SRT MES; 1.9A {Bacillus firmus}
Probab=43.21 E-value=58 Score=32.11 Aligned_cols=79 Identities=14% Similarity=0.119 Sum_probs=57.4
Q ss_pred chhHHHHHHhhhcCCCeEEEEEeCCCcccccccccccCccCCChHHHHhhhcCCCeEEEecCCCCCCCcccccccccccc
Q 007000 286 TLMLGDLLKIKSQEGVRVLILAWDDPTSRSILGYKTDGIMSTNDEETRRFFKHSSVQVLLCPRSAGKGHSFVKKQEVGTI 365 (622)
Q Consensus 286 g~~l~~~L~~aa~rGV~VriLv~D~~gs~~~~~~~~~~~~~~~~~~~~~~l~~~gv~v~~~~~~~~~~~~~~~~~~~~~~ 365 (622)
+.++...+.+...+|++|.+++ -+..+..+. ..+..+++.+-|+++...++.
T Consensus 50 gvrfy~~f~~h~~~Ggkv~~Il-GgstsQrlT-----------SKQavEElL~cGvev~IiNrk---------------- 101 (358)
T 2c1l_A 50 GVRFYETFTEHINQGGRVIAIL-GGSTSQRLS-----------SRQVVEELLNRGVEVHIINRK---------------- 101 (358)
T ss_dssp TTTTHHHHHHHHHTTCEEEEEE-ECCSSSCCB-----------BHHHHHHHHHTTCEEEEEECS----------------
T ss_pred ceeecHHHHHHHhcCCcEEEEE-ccccccccc-----------HHHHHHHHHhcCCceEEeeee----------------
Confidence 5889999999999999999997 433332221 256777888899999887543
Q ss_pred cccccceEEEccCCccCcceeEEEEcccccCC
Q 007000 366 YTHHQKTVVVDADAGQFKRKIIAFVGGLDLCK 397 (622)
Q Consensus 366 ~r~HrK~vVIDg~~~~~~~~~vafvGG~Ni~~ 397 (622)
.-.|.|+-..-... .....||+-|++.
T Consensus 102 Ri~HaK~Yg~~~n~-----g~~LIV~SgNfT~ 128 (358)
T 2c1l_A 102 RILHAKLYGTSNNL-----GESLVVSSGNFTG 128 (358)
T ss_dssp SCBCCEEEEEEETT-----EEEEEEESCCBST
T ss_pred eecchhhhcccCCC-----ceEEEEecCCccc
Confidence 12799998885422 1567899999875
Done!