Your job contains 1 sequence.
>007002
MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA
TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ
KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP
KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGITIDLAL
QWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHV
REGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKS
LSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQG
RDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIII
LTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKV
KSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGAR
VDTRKELIQNAANLVNLDHLDI
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 007002
(622 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2146698 - symbol:GYRB2 "DNA GYRASE B2" species... 2532 3.6e-263 1
UNIPROTKB|Q5NBJ3 - symbol:GYRB "DNA gyrase subunit B, chl... 2411 2.4e-250 1
UNIPROTKB|Q7NHM9 - symbol:gyrB "DNA gyrase subunit B" spe... 1691 4.7e-174 1
UNIPROTKB|A8IIG8 - symbol:TOP3 "DNA gyrase subunit B-like... 1589 3.1e-163 1
TIGR_CMR|CHY_2705 - symbol:CHY_2705 "DNA gyrase, B subuni... 1497 1.7e-153 1
UNIPROTKB|P05652 - symbol:gyrB "DNA gyrase subunit B" spe... 1441 1.5e-147 1
UNIPROTKB|P77993 - symbol:gyrB "DNA gyrase subunit B" spe... 1439 2.4e-147 1
UNIPROTKB|Q8TQG0 - symbol:gyrB "DNA gyrase subunit B" spe... 1430 2.2e-146 1
TIGR_CMR|BA_0005 - symbol:BA_0005 "DNA gyrase, B subunit"... 1424 9.3e-146 1
UNIPROTKB|Q8A277 - symbol:gyrB "DNA gyrase subunit B" spe... 1347 1.3e-137 1
TIGR_CMR|DET_0004 - symbol:DET_0004 "DNA gyrase, B subuni... 1344 2.8e-137 1
UNIPROTKB|Q74H89 - symbol:gyrB "DNA gyrase subunit B" spe... 1161 5.8e-137 2
TIGR_CMR|GSU_0003 - symbol:GSU_0003 "DNA gyrase, B subuni... 1161 5.8e-137 2
UNIPROTKB|Q8FA30 - symbol:gyrB "DNA gyrase subunit B" spe... 1325 2.9e-135 1
UNIPROTKB|O08399 - symbol:gyrB "DNA gyrase subunit B" spe... 1314 4.2e-134 1
UNIPROTKB|Q3KMH2 - symbol:gyrB_1 "DNA gyrase subunit B" s... 1144 1.1e-133 2
UNIPROTKB|Q9KVX3 - symbol:gyrB "DNA gyrase subunit B" spe... 1119 1.8e-131 2
TIGR_CMR|VC_0015 - symbol:VC_0015 "DNA gyrase, subunit B"... 1119 1.8e-131 2
UNIPROTKB|P0AES6 - symbol:gyrB species:83333 "Escherichia... 1122 1.6e-130 2
TIGR_CMR|SPO_0155 - symbol:SPO_0155 "DNA gyrase, B subuni... 1114 2.0e-130 2
TIGR_CMR|SO_0011 - symbol:SO_0011 "DNA gyrase, B subunit"... 1082 2.3e-129 2
TIGR_CMR|CBU_0004 - symbol:CBU_0004 "DNA gyrase, B subuni... 1113 6.2e-129 2
UNIPROTKB|P0C5C5 - symbol:gyrB "DNA gyrase subunit B" spe... 910 1.9e-127 2
UNIPROTKB|Q89W70 - symbol:gyrB "DNA gyrase subunit B" spe... 1115 3.8e-127 2
UNIPROTKB|A6UX65 - symbol:gyrB "DNA gyrase subunit B" spe... 1086 4.9e-127 2
TIGR_CMR|BA_3657 - symbol:BA_3657 "DNA topoisomerase IV, ... 1240 2.9e-126 1
UNIPROTKB|Q59192 - symbol:parE "DNA topoisomerase 4 subun... 1218 6.3e-124 1
UNIPROTKB|A9WGP2 - symbol:gyrB "DNA gyrase subunit B" spe... 1216 1.0e-123 1
UNIPROTKB|O67137 - symbol:gyrB "DNA gyrase subunit B" spe... 1210 4.4e-123 1
TIGR_CMR|NSE_0721 - symbol:NSE_0721 "DNA gyrase, B subuni... 1054 5.8e-122 2
TIGR_CMR|APH_0716 - symbol:APH_0716 "DNA gyrase, B subuni... 1043 5.1e-121 2
TIGR_CMR|ECH_0620 - symbol:ECH_0620 "DNA gyrase, B subuni... 1037 8.4e-121 2
UNIPROTKB|P35886 - symbol:gyrB "DNA gyrase subunit B" spe... 1176 1.8e-119 1
UNIPROTKB|Q7RHG3 - symbol:PY04024 "DNA topoisomerase II, ... 522 1.1e-116 5
TIGR_CMR|CJE_0003 - symbol:CJE_0003 "DNA gyrase, B subuni... 1142 7.1e-116 1
UNIPROTKB|Q9RVW5 - symbol:DR_0906 "DNA gyrase, subunit B"... 1138 1.9e-115 1
GENEDB_PFALCIPARUM|PFL1915w - symbol:PFL1915w "dna gyrase... 503 5.3e-112 5
UNIPROTKB|Q8I528 - symbol:GyrB "Term=DNA gyrase subunit B... 503 5.3e-112 5
UNIPROTKB|O69998 - symbol:O69998 "Putative DNA gyrase sub... 704 2.8e-103 2
UNIPROTKB|Q89M38 - symbol:gyrB "DNA gyrase subunit B" spe... 997 1.7e-100 1
TIGR_CMR|SPO_1253 - symbol:SPO_1253 "DNA topoisomerase IV... 920 2.4e-92 1
TIGR_CMR|SO_3899 - symbol:SO_3899 "DNA topoisomerase IV, ... 886 9.6e-89 1
UNIPROTKB|A6VD80 - symbol:parE "DNA topoisomerase IV, B s... 879 5.3e-88 1
UNIPROTKB|Q9KPD9 - symbol:VC_2431 "Topoisomerase IV, subu... 877 8.6e-88 1
TIGR_CMR|VC_2431 - symbol:VC_2431 "topoisomerase IV, subu... 877 8.6e-88 1
TIGR_CMR|CBU_0064 - symbol:CBU_0064 "DNA topoisomerase IV... 866 1.3e-86 1
UNIPROTKB|P20083 - symbol:parE species:83333 "Escherichia... 847 1.3e-84 1
TAIR|locus:2146658 - symbol:GYRB3 "DNA GYRASE B3" species... 656 2.3e-64 1
UNIPROTKB|Q8A3C1 - symbol:BT_3033 "DNA topoisomerase IV s... 410 3.0e-48 2
UNIPROTKB|Q3KL33 - symbol:gyrB_2 "DNA gyrase subunit B" s... 418 3.9e-47 2
DICTYBASE|DDB_G0279737 - symbol:top2mt "DNA topoisomerase... 381 4.0e-32 1
UNIPROTKB|Q0DYE1 - symbol:Os02g0699700 "DNA topoisomerase... 340 1.1e-27 1
WB|WBGene00019884 - symbol:R05D3.12 species:6239 "Caenorh... 252 5.7e-27 2
UNIPROTKB|P34534 - symbol:R05D3.12 "Putative DNA topoisom... 252 5.7e-27 2
RGD|62048 - symbol:Top2a "topoisomerase (DNA) II alpha" s... 270 8.1e-27 3
MGI|MGI:98790 - symbol:Top2a "topoisomerase (DNA) II alph... 269 2.7e-26 3
UNIPROTKB|F1Q2M4 - symbol:TOP2A "DNA topoisomerase 2" spe... 305 4.3e-26 2
UNIPROTKB|J9PAY8 - symbol:TOP2A "DNA topoisomerase 2" spe... 305 4.4e-26 2
UNIPROTKB|P11388 - symbol:TOP2A "DNA topoisomerase 2-alph... 267 4.6e-26 3
UNIPROTKB|P41515 - symbol:TOP2A "DNA topoisomerase 2-alph... 265 9.7e-26 3
UNIPROTKB|Q8EYL9 - symbol:LA_4194 "DNA gyrase subunit B" ... 307 1.1e-25 2
UNIPROTKB|O46374 - symbol:TOP2A "DNA topoisomerase 2-alph... 297 3.5e-25 2
UNIPROTKB|F1MDU7 - symbol:TOP2A "DNA topoisomerase 2" spe... 295 7.4e-25 2
ZFIN|ZDB-GENE-041008-136 - symbol:top2b "topoisomerase (D... 257 9.6e-25 3
UNIPROTKB|F1NR58 - symbol:TOP2B "DNA topoisomerase 2" spe... 294 2.9e-24 2
UNIPROTKB|O42131 - symbol:TOP2B "DNA topoisomerase 2-beta... 294 2.9e-24 2
UNIPROTKB|E1BZ19 - symbol:TOP2B "DNA topoisomerase 2" spe... 294 2.9e-24 2
UNIPROTKB|E9PCY5 - symbol:TOP2B "DNA topoisomerase 2" spe... 288 4.1e-24 2
UNIPROTKB|Q7RJ69 - symbol:PY03394 "DNA topoisomerase 2" s... 231 7.8e-24 3
UNIPROTKB|A8JD08 - symbol:TOP2 "DNA topoisomerase 2" spec... 265 8.1e-24 2
MGI|MGI:98791 - symbol:Top2b "topoisomerase (DNA) II beta... 289 8.2e-24 2
POMBASE|SPBC1A4.03c - symbol:top2 "DNA topoisomerase II" ... 280 9.7e-24 2
UNIPROTKB|F1MU48 - symbol:TOP2B "DNA topoisomerase 2" spe... 288 1.0e-23 2
UNIPROTKB|F1PRA7 - symbol:TOP2B "DNA topoisomerase 2" spe... 288 1.0e-23 2
UNIPROTKB|Q64399 - symbol:TOP2B "DNA topoisomerase 2-beta... 288 1.1e-23 2
UNIPROTKB|F1RS45 - symbol:TOP2B "DNA topoisomerase 2" spe... 288 1.1e-23 2
UNIPROTKB|Q02880 - symbol:TOP2B "DNA topoisomerase 2-beta... 288 1.1e-23 2
UNIPROTKB|Q755V8 - symbol:AER410W "DNA topoisomerase 2" s... 306 1.3e-23 1
UNIPROTKB|F1M7A0 - symbol:Top2a "DNA topoisomerase 2" spe... 270 1.6e-23 3
UNIPROTKB|O42130 - symbol:TOP2A "DNA topoisomerase 2-alph... 245 1.8e-23 3
UNIPROTKB|E9PTY5 - symbol:Top2a "DNA topoisomerase 2" spe... 270 2.1e-23 3
SGD|S000005032 - symbol:TOP2 "Topoisomerase II, relieves ... 304 2.2e-23 1
UNIPROTKB|F1NZF0 - symbol:TOP2A "DNA topoisomerase 2" spe... 244 2.4e-23 3
WB|WBGene00010785 - symbol:top-2 species:6239 "Caenorhabd... 268 8.5e-23 2
UNIPROTKB|Q23670 - symbol:K12D12.1 "Probable DNA topoisom... 268 8.5e-23 2
FB|FBgn0003732 - symbol:Top2 "Topoisomerase 2" species:72... 212 3.2e-22 2
TAIR|locus:2076201 - symbol:TOPII "AT3G23890" species:370... 289 1.0e-21 1
UNIPROTKB|F1P2F2 - symbol:TOP2A "DNA topoisomerase 2" spe... 244 2.9e-21 3
UNIPROTKB|Q7S9W8 - symbol:NCU06338 "DNA topoisomerase 2" ... 207 1.1e-19 3
ZFIN|ZDB-GENE-030131-2453 - symbol:top2a "topoisomerase (... 221 1.9e-19 3
DICTYBASE|DDB_G0270418 - symbol:top2 "DNA topoisomerase I... 241 7.1e-19 2
CGD|CAL0005199 - symbol:TOP2 species:5476 "Candida albica... 255 5.3e-18 1
UNIPROTKB|Q5A1E7 - symbol:TOP2 "DNA topoisomerase 2" spec... 255 5.3e-18 1
ASPGD|ASPL0000029372 - symbol:top2 species:162425 "Emeric... 227 9.7e-18 2
UNIPROTKB|Q5B224 - symbol:AN5406.2 "DNA topoisomerase 2" ... 227 9.7e-18 2
WB|WBGene00022854 - symbol:cin-4 species:6239 "Caenorhabd... 193 1.4e-11 1
UNIPROTKB|G5ECQ8 - symbol:cin-4 "Chromosome instability 4... 193 1.4e-11 1
>TAIR|locus:2146698 [details] [associations]
symbol:GYRB2 "DNA GYRASE B2" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003918
"DNA topoisomerase type II (ATP-hydrolyzing) activity"
evidence=IEA;ISS;IBA] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005694 "chromosome" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=ISM;IDA] [GO:0006200 "ATP catabolic process" evidence=IBA]
[GO:0006259 "DNA metabolic process" evidence=ISS] [GO:0006261
"DNA-dependent DNA replication" evidence=IBA] [GO:0006265 "DNA
topological change" evidence=IEA;ISS;IBA] [GO:0007059 "chromosome
segregation" evidence=IBA] [GO:0008094 "DNA-dependent ATPase
activity" evidence=IBA] [GO:0009330 "DNA topoisomerase complex
(ATP-hydrolyzing)" evidence=IBA] [GO:0003916 "DNA topoisomerase
activity" evidence=IGI] InterPro:IPR001241 InterPro:IPR002288
InterPro:IPR003594 InterPro:IPR011557 InterPro:IPR013506
InterPro:IPR013759 InterPro:IPR013760 InterPro:IPR018522
Pfam:PF00204 Pfam:PF00986 Pfam:PF02518 PRINTS:PR00418
PROSITE:PS00177 SMART:SM00387 SMART:SM00433 Pfam:PF01751
InterPro:IPR006171 GO:GO:0005739 GO:GO:0005524 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0005694 GO:GO:0007059 GO:GO:0006261
Gene3D:3.30.565.10 SUPFAM:SSF55874 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211 EMBL:AL391716
GO:GO:0009330 GO:GO:0006265 GO:GO:0003918 SUPFAM:SSF56719
EMBL:AY039521 EMBL:AY142041 IPI:IPI00527008 IPI:IPI00537479
RefSeq:NP_568133.1 RefSeq:NP_850762.1 UniGene:At.10083
ProteinModelPortal:Q94BZ7 SMR:Q94BZ7 STRING:Q94BZ7 PaxDb:Q94BZ7
PRIDE:Q94BZ7 EnsemblPlants:AT5G04130.1 GeneID:830291
KEGG:ath:AT5G04130 GeneFarm:4066 TAIR:At5g04130 eggNOG:COG0187
HOGENOM:HOG000075155 InParanoid:Q94BZ7 KO:K02470 OMA:IGKNEYN
PhylomeDB:Q94BZ7 ProtClustDB:CLSN2689450 Genevestigator:Q94BZ7
GermOnline:AT5G04130 Gene3D:3.40.50.670 TIGRFAMs:TIGR01059
PROSITE:PS50880 Uniprot:Q94BZ7
Length = 732
Score = 2532 (896.4 bits), Expect = 3.6e-263, P = 3.6e-263
Identities = 481/622 (77%), Positives = 530/622 (85%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGSTG RGLHHLVYEILDNA+DEAQAGYAS ++V L AD SVSV DNGRGIP DLHPA
Sbjct: 111 MYIGSTGSRGLHHLVYEILDNAIDEAQAGYASKVDVVLHADGSVSVVDNGRGIPTDLHPA 170
Query: 61 TNKSALETVLTVLHAXXXXXXXXXXXXXXXXXXXXXXXXXNALSESLEVTVWRDGMEYHQ 120
T KS+LETVLTVLHA NALSE+LEV+VWRDGME+ Q
Sbjct: 171 TKKSSLETVLTVLHAGGKFGGTSSGYSVSGGLHGVGLSVVNALSEALEVSVWRDGMEHKQ 230
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
YSRGKP+TTLTC VLP++SK +GT IRFWPDK+VFTTAI+FDHNTIAGRIRELAFLNP
Sbjct: 231 NYSRGKPITTLTCRVLPLESKGTKGTSIRFWPDKEVFTTAIEFDHNTIAGRIRELAFLNP 290
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGITIDLAL 240
K+TI+L+KED DPEK QY+EY FAGGL EYV WLNTDK P+HDV+GFR++++G T+D+AL
Sbjct: 291 KVTISLKKEDDDPEKTQYSEYSFAGGLTEYVSWLNTDKNPIHDVLGFRREINGATVDVAL 350
Query: 241 QWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHV 300
QWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLN+L KKSKTVK+KDISLSGEHV
Sbjct: 351 QWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNTLAKKSKTVKEKDISLSGEHV 410
Query: 301 REGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVXXXXXXXX 360
REGLTCI+SV+VPNPEFEGQTKTRLGNPEVRK+VDQSVQEYLTE+LELHPD+
Sbjct: 411 REGLTCIVSVKVPNPEFEGQTKTRLGNPEVRKIVDQSVQEYLTEFLELHPDILESIISKS 470
Query: 361 XXXXXXXXXXXXXXXXVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQG 420
VR KSVL+SSSLPGKLADCSST PE SEIFIVEGDSAGGSAKQG
Sbjct: 471 LNAYKAALAAKRARELVRSKSVLKSSSLPGKLADCSSTDPEVSEIFIVEGDSAGGSAKQG 530
Query: 421 RDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIII 480
RDRRFQAILPLRGKILN+ERKDEAAMYKNEEIQNLI LGLGVKGEDFKKE LRYHKIII
Sbjct: 531 RDRRFQAILPLRGKILNIERKDEAAMYKNEEIQNLILGLGLGVKGEDFKKENLRYHKIII 590
Query: 481 LTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKV 540
LTDADVDGAHIRTLLLTFF+RYQ+ LFD GCIYVGVPPL+KVERGK QYCYDDA+LKK+
Sbjct: 591 LTDADVDGAHIRTLLLTFFFRYQRALFDAGCIYVGVPPLFKVERGKNAQYCYDDADLKKI 650
Query: 541 KSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGAR 600
S+FP+NA Y+IQRFKGLGEMMP QLWETT+NPE R+LKQLV++D AEAN+ FSSLMGAR
Sbjct: 651 TSNFPANASYNIQRFKGLGEMMPEQLWETTMNPETRILKQLVVDDIAEANMTFSSLMGAR 710
Query: 601 VDTRKELIQNAANLVNLDHLDI 622
VD RKELI+NAA +NL LDI
Sbjct: 711 VDVRKELIKNAATRINLQRLDI 732
>UNIPROTKB|Q5NBJ3 [details] [associations]
symbol:GYRB "DNA gyrase subunit B,
chloroplastic/mitochondrial" species:39947 "Oryza sativa Japonica
Group" [GO:0003918 "DNA topoisomerase type II (ATP-hydrolyzing)
activity" evidence=IBA] [GO:0006261 "DNA-dependent DNA replication"
evidence=IBA] [GO:0006265 "DNA topological change" evidence=IBA]
[GO:0007059 "chromosome segregation" evidence=IBA] [GO:0009295
"nucleoid" evidence=IBA] InterPro:IPR001241 InterPro:IPR002288
InterPro:IPR003594 InterPro:IPR011557 InterPro:IPR013506
InterPro:IPR013759 InterPro:IPR013760 InterPro:IPR018522
Pfam:PF00204 Pfam:PF00986 Pfam:PF02518 PRINTS:PR00418
PROSITE:PS00177 SMART:SM00387 SMART:SM00433 Pfam:PF01751
InterPro:IPR006171 GO:GO:0005739 GO:GO:0005524 GO:GO:0009507
GO:GO:0005694 GO:GO:0007059 GO:GO:0006261 Gene3D:3.30.565.10
SUPFAM:SSF55874 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0009295 GO:GO:0006265
GO:GO:0003918 SUPFAM:SSF56719 eggNOG:COG0187 KO:K02470
ProtClustDB:CLSN2689450 Gene3D:3.40.50.670 TIGRFAMs:TIGR01059
PROSITE:PS50880 OMA:IFETTEF EMBL:AP001073 EMBL:AP000969
EMBL:AK102391 RefSeq:NP_001042691.1 UniGene:Os.37563
ProteinModelPortal:Q5NBJ3 STRING:Q5NBJ3 PRIDE:Q5NBJ3 GeneID:4326261
KEGG:dosa:Os01t0268300-01 KEGG:osa:4326261 Gramene:Q5NBJ3
Uniprot:Q5NBJ3
Length = 729
Score = 2411 (853.8 bits), Expect = 2.4e-250, P = 2.4e-250
Identities = 459/622 (73%), Positives = 519/622 (83%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGSTG RGLHHLVYEILDNAVDEAQAGYA+ ++V L DNSVSV DNGRGIP D+HP
Sbjct: 109 MYIGSTGSRGLHHLVYEILDNAVDEAQAGYATKVDVILHGDNSVSVTDNGRGIPTDIHPQ 168
Query: 61 TNKSALETVLTVLHAXXXXXXXXXXXXXXXXXXXXXXXXXNALSESLEVTVWRDGMEYHQ 120
T KS +ETVLT++HA NALSE+LEVTVWRDG EY Q
Sbjct: 169 TKKSCVETVLTLMHAGGKFGGSKSGYTVSGGLHGVGLSVVNALSEALEVTVWRDGKEYRQ 228
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
YSRGK +T LT L +S RQGTRIRFWPDK +FTT + FD NTIAGRIRELAFLNP
Sbjct: 229 NYSRGKAITMLTSRTLSDESSSRQGTRIRFWPDKHIFTTTMDFDFNTIAGRIRELAFLNP 288
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGITIDLAL 240
+LTIAL KE+ D + Q+NEY +AGGL EYV+WLNTDKK LHD + FRK++DGIT+D++L
Sbjct: 289 ELTIALTKEEDDLQV-QHNEYCYAGGLVEYVKWLNTDKKSLHDPIAFRKEMDGITVDVSL 347
Query: 241 QWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHV 300
QWCSD+YSDT+LGYANSIRTIDGGTHI+G+K SLTRT+N+ KKSKT+KDKDISLSGEHV
Sbjct: 348 QWCSDSYSDTVLGYANSIRTIDGGTHIDGLKTSLTRTINNFAKKSKTLKDKDISLSGEHV 407
Query: 301 REGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVXXXXXXXX 360
REG+TCII+V+VPNPEFEGQTKTRLGNPEVR++V+QSVQE LTEYLELHPDV
Sbjct: 408 REGMTCIIAVKVPNPEFEGQTKTRLGNPEVRRIVEQSVQENLTEYLELHPDVLDSILSKS 467
Query: 361 XXXXXXXXXXXXXXXXVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQG 420
VR KSVL+SSSLPGKLADC+S+ PEESEIFIVEGDSAGGSAKQG
Sbjct: 468 LNALKAALAAKRARELVRTKSVLKSSSLPGKLADCASSDPEESEIFIVEGDSAGGSAKQG 527
Query: 421 RDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIII 480
RDR+FQAILPLRGKILN+ER+DEAA+YKNEEIQNLI ALGLGVKGEDF KEALRYHKI+I
Sbjct: 528 RDRKFQAILPLRGKILNIERRDEAALYKNEEIQNLIVALGLGVKGEDFNKEALRYHKIVI 587
Query: 481 LTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKV 540
LTDADVDGAHIRTLLLTFF+RYQK LFDEGCIYVGVPPLYKVERGKQ YCYDDA+LK++
Sbjct: 588 LTDADVDGAHIRTLLLTFFFRYQKALFDEGCIYVGVPPLYKVERGKQAHYCYDDADLKEL 647
Query: 541 KSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGAR 600
++FP+NA Y IQRFKGLGEMMP QLWETT++PE+RMLKQL +EDAAEANVVFSSLMG R
Sbjct: 648 VNTFPTNASYHIQRFKGLGEMMPAQLWETTMDPERRMLKQLKVEDAAEANVVFSSLMGTR 707
Query: 601 VDTRKELIQNAANLVNLDHLDI 622
VD RK+LIQNAA++VNL+HLDI
Sbjct: 708 VDVRKQLIQNAASMVNLEHLDI 729
>UNIPROTKB|Q7NHM9 [details] [associations]
symbol:gyrB "DNA gyrase subunit B" species:251221
"Gloeobacter violaceus PCC 7421" [GO:0003918 "DNA topoisomerase
type II (ATP-hydrolyzing) activity" evidence=IBA] [GO:0006261
"DNA-dependent DNA replication" evidence=IBA] [GO:0006265 "DNA
topological change" evidence=IBA] [GO:0007059 "chromosome
segregation" evidence=IBA] [GO:0009295 "nucleoid" evidence=IBA]
HAMAP:MF_01898 InterPro:IPR001241 InterPro:IPR002288
InterPro:IPR003594 InterPro:IPR011557 InterPro:IPR013506
InterPro:IPR013759 InterPro:IPR013760 InterPro:IPR018522
Pfam:PF00204 Pfam:PF00986 Pfam:PF02518 PRINTS:PR00418
PROSITE:PS00177 SMART:SM00387 SMART:SM00433 Pfam:PF01751
InterPro:IPR006171 GO:GO:0005524 GO:GO:0005737 GO:GO:0005694
GO:GO:0007059 GO:GO:0006261 Gene3D:3.30.565.10 SUPFAM:SSF55874
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 GO:GO:0009295 GO:GO:0006265 GO:GO:0003918
SUPFAM:SSF56719 KO:K02470 Gene3D:3.40.50.670 TIGRFAMs:TIGR01059
OMA:IFETTEF ProtClustDB:PRK05644 EMBL:BA000045
GenomeReviews:BA000045_GR HSSP:P06982 RefSeq:NP_925452.1
ProteinModelPortal:Q7NHM9 GeneID:2600907 KEGG:gvi:gvip344
PATRIC:22044491 BioCyc:GVIO251221:GH9A-2555-MONOMER Uniprot:Q7NHM9
Length = 644
Score = 1691 (600.3 bits), Expect = 4.7e-174, P = 4.7e-174
Identities = 335/627 (53%), Positives = 425/627 (67%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGSTGPRGLHHLVYEI+DN+VDEA AG+ +I ++L AD S ++ D+GRGIP D HP
Sbjct: 25 MYIGSTGPRGLHHLVYEIVDNSVDEALAGHCKHIAISLGADGSATITDDGRGIPTDTHPR 84
Query: 61 TNKSALETVLTVLHAXXXXXXXXXXXXXXXXXXXXXXXXXNALSESLEVTVWRDGMEYHQ 120
T KS +ETVLTVL A NALS L T+WR+G +Y Q
Sbjct: 85 TGKSTIETVLTVLGAGGKFGGGGYKVSGGLHGVGAAVV--NALSTILTATIWREGKQYIQ 142
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
++ RG P L + DS+ R+GT I F PD ++FTT + FD +T+ R RELAFLN
Sbjct: 143 RFHRGIPEGGLA---VSSDSQKRRGTMISFLPDPEIFTTGVDFDFDTLLSRFRELAFLNA 199
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLA 239
+ R D E + Y + GG+ EYV+++ +K LH D++ ++ DG++++ A
Sbjct: 200 G--VEFRFSDLRGETERTESYIYEGGIREYVKYMTREKAALHPDIIFINQERDGVSVECA 257
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
LQW +D Y+D +LG+AN+IRTIDGGTH+EG+KA LTRT NS +K+ +KD D +L+GEH
Sbjct: 258 LQWSTDVYNDNVLGFANNIRTIDGGTHLEGLKAVLTRTFNSFARKANKLKDGDKNLTGEH 317
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVXXXXXXX 359
VREGLT ++SV+VPNPEFEGQTKT+LGNPEVR +VD + E LTEYLE HPDV
Sbjct: 318 VREGLTAVLSVKVPNPEFEGQTKTKLGNPEVRGIVDGVISEKLTEYLEFHPDVVASILEK 377
Query: 360 XXXXXXXXXXXXXXXXXVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
VR+KS L SS+LPGKLADC S P ESE+F+VEGDSAGGSAKQ
Sbjct: 378 ALQSMQAEEAARKARDLVRRKSALESSTLPGKLADCQSRDPAESEVFLVEGDSAGGSAKQ 437
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRDRRFQAILPLRGKILN+ER D+ +Y N EIQ +I LGLG+K E+F LRYH+II
Sbjct: 438 GRDRRFQAILPLRGKILNIERADDRKIYGNNEIQAMITGLGLGLKTEEFDVGRLRYHRII 497
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVE----RGKQVQYCYDDA 535
I+TDADVDGAHIRTLLLTFFYRY++ L ++G IY+ PPLYK+ R V+YCY +
Sbjct: 498 IMTDADVDGAHIRTLLLTFFYRYKRDLVEQGYIYIAQPPLYKISIGGGRNIDVRYCYSEQ 557
Query: 536 ELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSS 595
E + + N Y +QRFKGLGEM QLWETT+NPE R L+Q+ IEDAAEA+ VF+
Sbjct: 558 EKEAILRGLRENQKYELQRFKGLGEMQADQLWETTMNPETRTLRQVTIEDAAEADRVFNI 617
Query: 596 LMGARVDTRKELIQNAANLVNLDHLDI 622
LMG RV+ R+E I+ + + LDI
Sbjct: 618 LMGDRVEPRREFIETYGPRLQMADLDI 644
>UNIPROTKB|A8IIG8 [details] [associations]
symbol:TOP3 "DNA gyrase subunit B-like protein"
species:3055 "Chlamydomonas reinhardtii" [GO:0003918 "DNA
topoisomerase type II (ATP-hydrolyzing) activity" evidence=IBA]
[GO:0006261 "DNA-dependent DNA replication" evidence=IBA]
[GO:0006265 "DNA topological change" evidence=IBA] [GO:0007059
"chromosome segregation" evidence=IBA] [GO:0009295 "nucleoid"
evidence=IBA] InterPro:IPR001241 InterPro:IPR002288
InterPro:IPR003594 InterPro:IPR013506 InterPro:IPR013759
InterPro:IPR013760 InterPro:IPR018522 Pfam:PF00204 Pfam:PF00986
Pfam:PF02518 PRINTS:PR00418 PROSITE:PS00177 SMART:SM00387
SMART:SM00433 Pfam:PF01751 InterPro:IPR006171 GO:GO:0005524
GO:GO:0005694 GO:GO:0007059 GO:GO:0006261 Gene3D:3.30.565.10
SUPFAM:SSF55874 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0009295 GO:GO:0006265
GO:GO:0003918 SUPFAM:SSF56719 eggNOG:COG0187 KO:K02470
ProtClustDB:CLSN2689450 Gene3D:3.40.50.670 EMBL:DS496117
RefSeq:XP_001690535.1 UniGene:Cre.5744 ProteinModelPortal:A8IIG8
STRING:A8IIG8 EnsemblPlants:EDP05794 GeneID:5716144
KEGG:cre:CHLREDRAFT_114600 BioCyc:CHLAMY:CHLREDRAFT_114600-MONOMER
Uniprot:A8IIG8
Length = 649
Score = 1589 (564.4 bits), Expect = 3.1e-163, P = 3.1e-163
Identities = 330/636 (51%), Positives = 425/636 (66%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVAL-LADNSVSVADNGRGIPIDLHP 59
MYIG TG GLHHL++E++DNAVDE QAG+AS +EV + L+ VSV DNGRGIP+D+HP
Sbjct: 15 MYIGGTGSDGLHHLIWEVVDNAVDEVQAGHASAVEVDVDLSSGWVSVVDNGRGIPVDVHP 74
Query: 60 ATNKSALETVLTVLHAXXXXXXXXXXXXXXXXXXXXXXXXXNALSESLEVTVWRDGMEYH 119
T KSALETVLTVLHA NALS LEVTVWR G Y
Sbjct: 75 VTGKSALETVLTVLHAGGKFGGDNSGYKVSGGLHGVGISVVNALSSELEVTVWRAGSRYS 134
Query: 120 QKYSRGKPVTTLTCHVLPVDSKD--RQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAF 177
Q+YSRG P+ L +LP S++ R GT++RF D +F + + + IA R+ ELAF
Sbjct: 135 QRYSRGAPLEELRVQLLPPGSEEAGRSGTQVRFLYDASIFAKDVAYSADVIATRLHELAF 194
Query: 178 LNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDV-DGIT 235
LN + TI R + Q+ + ++GGL E+V L PLH+ +V R D G+
Sbjct: 195 LNARATIRFRALRRGKPEGQWQVFQYSGGLREFVGCLQAAYTPLHEALVVTRADGGSGVV 254
Query: 236 IDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISL 295
++ ALQW +D++ + + G+ANSI T+DGGTH+EG++A LTR + LG+K+K +KD D L
Sbjct: 255 VEAALQWAADSFKEEVRGFANSIHTVDGGTHMEGLRAGLTRAVTQLGRKAKQIKDSDPPL 314
Query: 296 SGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVXXX 355
SGEHVREGL ++SV+VPNPEFEGQTKTRLGNPEVRK+V+ +V E + E+LE HP
Sbjct: 315 SGEHVREGLGAVVSVKVPNPEFEGQTKTRLGNPEVRKIVENAVYEAVGEWLEAHPAALAA 374
Query: 356 XXXXXXXXXXXXXXXXXXXXXVRQKSVLRS--SSLPGKLADCSSTTPEESEIFIVEGDSA 413
VR+K+ L + S+LPGKLADC+ST EE+EI+IVEGDSA
Sbjct: 375 LCAKALTSARAAEAARKARELVRRKTSLFTGRSTLPGKLADCTSTNREETEIYIVEGDSA 434
Query: 414 GGSAKQGRDRRFQAILPLRGKILNVERKDEA--AMYKNEEIQNLIRALG----LGVKGED 467
GGSAKQ RDRRFQAILPL+GKILNVER +A MYKN EI NLI ALG +GV+
Sbjct: 435 GGSAKQARDRRFQAILPLKGKILNVERLTDANELMYKNTEISNLI-ALGYERTVGVRSRC 493
Query: 468 FKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQ 527
+ L Y KI++LTDADVDGAHIRTLLLTF +R++ LF G +YV VPPLYKVERGK
Sbjct: 494 HAFKLLLYGKIVVLTDADVDGAHIRTLLLTFLFRHRPQLFAAGRVYVAVPPLYKVERGKS 553
Query: 528 VQYCYDDAELKKVKSSFP-SNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDA 586
V + + DAEL + S + YS+QRFKGLGEMMP QLW+TTLNPE R+L++L + D
Sbjct: 554 VWWAHSDAELAALVSEQRLAPGGYSVQRFKGLGEMMPQQLWDTTLNPESRLLRRLTVRDV 613
Query: 587 AEANVVFSSLMGARVDTRKELIQNAANLVNLDHLDI 622
+EA+ + + LMG +V+ RK LI+ + ++LD LD+
Sbjct: 614 SEADSMLTMLMGTKVEPRKALIEAYSRRLSLDALDV 649
>TIGR_CMR|CHY_2705 [details] [associations]
symbol:CHY_2705 "DNA gyrase, B subunit" species:246194
"Carboxydothermus hydrogenoformans Z-2901" [GO:0003918 "DNA
topoisomerase type II (ATP-hydrolyzing) activity" evidence=ISS]
[GO:0006265 "DNA topological change" evidence=ISS] [GO:0009330 "DNA
topoisomerase complex (ATP-hydrolyzing)" evidence=ISS]
HAMAP:MF_01898 InterPro:IPR001241 InterPro:IPR002288
InterPro:IPR003594 InterPro:IPR011557 InterPro:IPR013506
InterPro:IPR013759 InterPro:IPR013760 InterPro:IPR018522
Pfam:PF00204 Pfam:PF00986 Pfam:PF02518 PRINTS:PR00418
PROSITE:PS00177 SMART:SM00387 SMART:SM00433 Pfam:PF01751
InterPro:IPR006171 GO:GO:0005524 GO:GO:0005737 GO:GO:0005694
EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0006261
Gene3D:3.30.565.10 SUPFAM:SSF55874 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0006265
GO:GO:0003918 SUPFAM:SSF56719 eggNOG:COG0187 KO:K02470
Gene3D:3.40.50.670 TIGRFAMs:TIGR01059 OMA:IFETTEF
ProtClustDB:PRK05644 HOGENOM:HOG000075156 RefSeq:YP_361487.1
ProteinModelPortal:Q3A8P7 SMR:Q3A8P7 STRING:Q3A8P7 GeneID:3726578
KEGG:chy:CHY_2705 PATRIC:21278431
BioCyc:CHYD246194:GJCN-2703-MONOMER Uniprot:Q3A8P7
Length = 635
Score = 1497 (532.0 bits), Expect = 1.7e-153, P = 1.7e-153
Identities = 301/619 (48%), Positives = 418/619 (67%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST +GLHHLVYE++DN++DEA AG+ + IEV + D S++VADNGRGIP+D+HP
Sbjct: 30 MYIGSTNEKGLHHLVYEVVDNSIDEALAGFCNRIEVIIHKDGSITVADNGRGIPVDIHPE 89
Query: 61 TNKSALETVLTVLHAXXXXXXXXXXXXXXXXXXXXXXXXXNALSESLEVTVWRDGMEYHQ 120
K A+E VLT+LHA NALSE LEV + RDG Y+Q
Sbjct: 90 VGKPAVEVVLTMLHAGGKFGGGGYKVSGGLHGVGVSVV--NALSEWLEVRIKRDGNLYYQ 147
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
K+SRG+P+T L + GT I F PD ++F T ++F+++T+A R+ EL++LN
Sbjct: 148 KFSRGEPITELKI----IGKSKSTGTIITFKPDAEIFET-VEFNYDTLAKRLLELSYLNK 202
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGITIDLAL 240
+ I L+ E + K + E+ +GG+++Y+++LN +K+PLH ++ F K+ D + +++AL
Sbjct: 203 NVKIILKDERIN--KEEIFEH--SGGIKDYLKYLNKNKEPLHKIIYFEKEKDEVVVEVAL 258
Query: 241 QWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHV 300
Q+C+ ++S+ +L + N+I T +GGTH G K +LTR +N KK +K+ ++SL GE +
Sbjct: 259 QYCN-SFSENILSFTNNINTTEGGTHEIGFKTALTRVINDYAKKYNLIKENNLSLQGEDI 317
Query: 301 REGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVXXXXXXXX 360
REGLT IISV+VP+P+FEGQTKT+L N EVR +VD V +YL+ YLE +P V
Sbjct: 318 REGLTAIISVKVPDPQFEGQTKTKLVNTEVRSIVDSIVSDYLSTYLEENPAVGKKLIENA 377
Query: 361 XXXXXXXXXXXXXXXXVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQG 420
R+K+ L S++LPGKLADCS P E+++VEGDSAGGSAKQG
Sbjct: 378 IRAARAREAARKARELARRKTALESNTLPGKLADCSEKDPSLCELYLVEGDSAGGSAKQG 437
Query: 421 RDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIII 480
RDRRFQAILPLRGKILNVE+ + NEEI+ +I ALG GV +DF E RYH++II
Sbjct: 438 RDRRFQAILPLRGKILNVEKSRLDKILANEEIRAMITALGTGVD-KDFDIEKARYHRLII 496
Query: 481 LTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKV 540
+TDADVDGAHIRTLLLTFFYRY + L + G +Y+ PPLYKV++GK +Y Y D EL++
Sbjct: 497 MTDADVDGAHIRTLLLTFFYRYLRPLIENGYVYIAQPPLYKVKKGKLEKYLYSDDELERY 556
Query: 541 KSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGAR 600
+ + +IQR+KGLGEM P QLWETT+NPE R + ++ +EDAA+A+ +F+ LMG +
Sbjct: 557 LNEIGREGV-TIQRYKGLGEMDPEQLWETTMNPETRTILKVTLEDAAKADEIFTILMGDK 615
Query: 601 VDTRKELIQNAANLV-NLD 618
V+ R+E I+ A LV NLD
Sbjct: 616 VEPRREFIEKNAKLVRNLD 634
>UNIPROTKB|P05652 [details] [associations]
symbol:gyrB "DNA gyrase subunit B" species:224308 "Bacillus
subtilis subsp. subtilis str. 168" [GO:0003918 "DNA topoisomerase
type II (ATP-hydrolyzing) activity" evidence=IBA] [GO:0006261
"DNA-dependent DNA replication" evidence=IBA] [GO:0006265 "DNA
topological change" evidence=IBA] [GO:0007059 "chromosome
segregation" evidence=IBA] [GO:0009295 "nucleoid" evidence=IBA]
HAMAP:MF_01898 InterPro:IPR001241 InterPro:IPR002288
InterPro:IPR003594 InterPro:IPR011557 InterPro:IPR013506
InterPro:IPR013759 InterPro:IPR013760 InterPro:IPR018522
Pfam:PF00204 Pfam:PF00986 Pfam:PF02518 PRINTS:PR00418
PROSITE:PS00177 SMART:SM00387 SMART:SM00433 Pfam:PF01751
InterPro:IPR006171 GO:GO:0005524 GO:GO:0005737 GO:GO:0005694
GO:GO:0007059 GO:GO:0006261 EMBL:AL009126 GenomeReviews:AL009126_GR
Gene3D:3.30.565.10 SUPFAM:SSF55874 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0009295
EMBL:D26185 EMBL:X02369 GO:GO:0006265 GO:GO:0003918 SUPFAM:SSF56719
eggNOG:COG0187 KO:K02470 Gene3D:3.40.50.670 TIGRFAMs:TIGR01059
PROSITE:PS50880 ProtClustDB:PRK05644 PIR:E22930 RefSeq:NP_387887.1
ProteinModelPortal:P05652 SMR:P05652 PRIDE:P05652
EnsemblBacteria:EBBACT00000000768 GeneID:939456 KEGG:bsu:BSU00060
PATRIC:18971459 GenoList:BSU00060 HOGENOM:HOG000075156 OMA:MDRILAN
BioCyc:BSUB:BSU00060-MONOMER BindingDB:P05652 ChEMBL:CHEMBL4324
Uniprot:P05652
Length = 638
Score = 1441 (512.3 bits), Expect = 1.5e-147, P = 1.5e-147
Identities = 284/620 (45%), Positives = 395/620 (63%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST +GLHHLV+EI+DN++DEA AGY ++I + + DNS++V DNGRGIP+ +H
Sbjct: 28 MYIGSTNSKGLHHLVWEIVDNSIDEALAGYCTDINIQIEKDNSITVVDNGRGIPVGIHEK 87
Query: 61 TNKSALETVLTVLHAXXXXXXXXXXXXXXXXXXXXXXXXXNALSESLEVTVWRDGMEYHQ 120
+ A+E ++TVLHA NALS L+VTV RDG + Q
Sbjct: 88 MGRPAVEVIMTVLHAGGKFDGSGYKVSGGLHGVGASVV--NALSTELDVTVHRDGKIHRQ 145
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
Y RG PVT L + D GT F PD ++F+ ++D++ +A R+RELAFL
Sbjct: 146 TYKRGVPVTDLEI----IGETDHTGTTTHFVPDPEIFSETTEYDYDLLANRVRELAFLTK 201
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDV-VGFRKDVDGITIDLA 239
+ I + ED + + NEY + GG++ YV++LN K+ +H+ + + DGIT+++A
Sbjct: 202 GVNITI--EDKREGQERKNEYHYEGGIKSYVEYLNRSKEVVHEEPIYIEGEKDGITVEVA 259
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
LQ+ +D+Y+ + + N+I T +GGTH G K LTR +N +K +K+ D +LSG+
Sbjct: 260 LQY-NDSYTSNIYSFTNNINTYEGGTHEAGFKTGLTRVINDYARKKGLIKENDPNLSGDD 318
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVXXXXXXX 359
VREGLT IIS++ P+P+FEGQTKT+LGN E R + D + ++ +PD
Sbjct: 319 VREGLTAIISIKHPDPQFEGQTKTKLGNSEARTITDTLFSTAMETFMLENPDAAKKIVDK 378
Query: 360 XXXXXXXXXXXXXXXXXVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
R+KS L S+LPGKLADCSS P SE++IVEGDSAGGSAKQ
Sbjct: 379 GLMAARARMAAKKARELTRRKSALEISNLPGKLADCSSKDPSISELYIVEGDSAGGSAKQ 438
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRDR FQAILPLRGKILNVE+ + N E++++I ALG G+ GEDF E RYHK++
Sbjct: 439 GRDRHFQAILPLRGKILNVEKARLDKILSNNEVRSMITALGTGI-GEDFNLEKARYHKVV 497
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDGAHIRTLLLTFFYRY + + + G +Y+ PPLYKV++GK+V+Y Y+D EL++
Sbjct: 498 IMTDADVDGAHIRTLLLTFFYRYMRQIIENGYVYIAQPPLYKVQQGKRVEYAYNDKELEE 557
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
+ + P +QR+KGLGEM QLWETT++P R L Q+ +EDA +A+ F LMG
Sbjct: 558 LLKTLPQTPKPGLQRYKGLGEMNATQLWETTMDPSSRTLLQVTLEDAMDADETFEMLMGD 617
Query: 600 RVDTRKELIQ-NAANLVNLD 618
+V+ R+ I+ NA + NLD
Sbjct: 618 KVEPRRNFIEANARYVKNLD 637
>UNIPROTKB|P77993 [details] [associations]
symbol:gyrB "DNA gyrase subunit B" species:243274
"Thermotoga maritima MSB8" [GO:0003918 "DNA topoisomerase type II
(ATP-hydrolyzing) activity" evidence=IBA] [GO:0006261
"DNA-dependent DNA replication" evidence=IBA] [GO:0006265 "DNA
topological change" evidence=IBA] [GO:0007059 "chromosome
segregation" evidence=IBA] [GO:0009295 "nucleoid" evidence=IBA]
HAMAP:MF_01898 InterPro:IPR001241 InterPro:IPR002288
InterPro:IPR003594 InterPro:IPR011557 InterPro:IPR013506
InterPro:IPR013759 InterPro:IPR013760 InterPro:IPR018522
Pfam:PF00204 Pfam:PF00986 Pfam:PF02518 PRINTS:PR00418
PROSITE:PS00177 SMART:SM00387 SMART:SM00433 Pfam:PF01751
InterPro:IPR006171 GO:GO:0005524 GO:GO:0005737 GO:GO:0005694
GO:GO:0007059 GO:GO:0006261 Gene3D:3.30.565.10 SUPFAM:SSF55874
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 EMBL:AE000512 GenomeReviews:AE000512_GR
GO:GO:0009295 GO:GO:0006265 GO:GO:0003918 SUPFAM:SSF56719
eggNOG:COG0187 KO:K02470 Gene3D:3.40.50.670 TIGRFAMs:TIGR01059
PROSITE:PS50880 OMA:IFETTEF ProtClustDB:PRK05644 EMBL:U49692
PIR:JC4960 RefSeq:NP_228642.1 ProteinModelPortal:P77993 SMR:P77993
DNASU:898504 GeneID:898504 KEGG:tma:TM0833 PATRIC:23936592
Uniprot:P77993
Length = 636
Score = 1439 (511.6 bits), Expect = 2.4e-147, P = 2.4e-147
Identities = 302/631 (47%), Positives = 409/631 (64%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGSTG RGLHHLVYE++DN+VDEA AGY I V L D SV V DNGRGIP+D+HP
Sbjct: 24 MYIGSTGKRGLHHLVYEVVDNSVDEALAGYCDWIRVTLHEDGSVEVEDNGRGIPVDIHPE 83
Query: 61 TNKSALETVLTVLHAXXXXXXXXXXXXXXXXXXXXXXXXXNALSESLEVTVWRDGMEYHQ 120
+SALE V TVLHA NALSE LEV V RDG Y Q
Sbjct: 84 EGRSALEVVFTVLHAGGKFSKDSYKISGGLHGVGVSVV--NALSEWLEVRVHRDGKIYRQ 141
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y RGKPVT + + D+ GT +RF PD +F+ +FD + + R+RE+AFL P
Sbjct: 142 RYERGKPVTPVEV----IGETDKHGTIVRFKPDPLIFSET-EFDPDILEHRLREIAFLVP 196
Query: 181 KLTIALRKEDS-DPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDV-------- 231
L I ED + EK + F GG+ EYV++LN KK LHDV+ ++
Sbjct: 197 GLKIEF--EDRINGEKKTFK---FDGGIVEYVKYLNRGKKALHDVIHIKRTEKVKTKNGE 251
Query: 232 DGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDK 291
D + +++A Q+ +D+YS+ ++ +AN+I+T+DGGTH+ K++LTR +N GKK +K K
Sbjct: 252 DEVIVEIAFQY-TDSYSEDIVSFANTIKTVDGGTHVTAFKSTLTRLMNEYGKKHNFLK-K 309
Query: 292 DISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPD 351
D S GE VREGLT +ISV V NPEFEGQTK++LGN EV++ V ++++E L + + +P+
Sbjct: 310 DDSFQGEDVREGLTAVISVYVKNPEFEGQTKSKLGNEEVKEAVTKAMREELKKIFDANPE 369
Query: 352 VXXXXXXXXXXXXXXXXXXXXXXXXVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGD 411
+ VR+K+VL++++LPGKLADCSST E++E+FIVEGD
Sbjct: 370 LVKTILSKIMSTKQAREAAKRAREMVRRKNVLQNTTLPGKLADCSSTHREKTELFIVEGD 429
Query: 412 SAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKE 471
SAGGSAKQ RDR FQA+LP+RGKILNVE+ + KNE+I ++I A+G G+ G+DF +
Sbjct: 430 SAGGSAKQARDREFQAVLPIRGKILNVEKSSLDRLLKNEQISDIIVAVGTGI-GDDFDES 488
Query: 472 ALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYC 531
LRY +III+TDAD+DGAHIRTLLLT FYRY + L ++G +Y+ +PPLY+++ G++ Y
Sbjct: 489 KLRYGRIIIMTDADIDGAHIRTLLLTLFYRYMRPLIEQGRVYIALPPLYRIKAGREEFYV 548
Query: 532 YDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANV 591
Y D EL + K + IQR+KGLGEM P QLWETT+NPE R + ++ IEDA EA+
Sbjct: 549 YSDQELAEYKEKLQGKRI-EIQRYKGLGEMNPEQLWETTMNPETRKIIRVTIEDAEEADR 607
Query: 592 VFSSLMGARVDTRKELIQNAANLVNLDHLDI 622
+F LMG +R+E I+ A + + LDI
Sbjct: 608 LFEILMGNDPSSRREFIERHA--LKVKELDI 636
>UNIPROTKB|Q8TQG0 [details] [associations]
symbol:gyrB "DNA gyrase subunit B" species:188937
"Methanosarcina acetivorans C2A" [GO:0003918 "DNA topoisomerase
type II (ATP-hydrolyzing) activity" evidence=IBA] [GO:0006261
"DNA-dependent DNA replication" evidence=IBA] [GO:0006265 "DNA
topological change" evidence=IBA] [GO:0007059 "chromosome
segregation" evidence=IBA] [GO:0009295 "nucleoid" evidence=IBA]
HAMAP:MF_01898 InterPro:IPR001241 InterPro:IPR002288
InterPro:IPR003594 InterPro:IPR011557 InterPro:IPR013506
InterPro:IPR013759 InterPro:IPR013760 InterPro:IPR018522
Pfam:PF00204 Pfam:PF00986 Pfam:PF02518 PRINTS:PR00418
PROSITE:PS00177 SMART:SM00387 SMART:SM00433 Pfam:PF01751
InterPro:IPR006171 GO:GO:0005524 GO:GO:0005737 GO:GO:0005694
GO:GO:0007059 GO:GO:0006261 Gene3D:3.30.565.10 SUPFAM:SSF55874
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 GO:GO:0009295 EMBL:AE010299
GenomeReviews:AE010299_GR GO:GO:0006265 GO:GO:0003918
SUPFAM:SSF56719 eggNOG:COG0187 KO:K02470 Gene3D:3.40.50.670
TIGRFAMs:TIGR01059 OMA:IFETTEF ProtClustDB:PRK05644
RefSeq:NP_616517.1 HSSP:P06982 ProteinModelPortal:Q8TQG0
GeneID:1473472 KEGG:mac:MA1584 BioCyc:MACE188937:GI2O-1646-MONOMER
Uniprot:Q8TQG0
Length = 634
Score = 1430 (508.4 bits), Expect = 2.2e-146, P = 2.2e-146
Identities = 301/620 (48%), Positives = 398/620 (64%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLVYE++DN++DEA AG+ + ++V + D SV+V DNGRGIPID HP
Sbjct: 27 MYIGSTDSRGLHHLVYEVVDNSIDEALAGFCTRVDVTINPDGSVTVLDNGRGIPIDPHPV 86
Query: 61 TNKSALETVLTVLHAXXXXXXXXXXXXXXXXXXXXXXXXXNALSESLEVTVWRDGMEYHQ 120
KSALE V+TVLHA NALSE L V V RDG +Y Q
Sbjct: 87 HKKSALEVVMTVLHAGGKFDKNTYKVSGGLHGVGVSVV--NALSEWLNVEVERDGKKYFQ 144
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y RGKP V + + GT+ F PD ++F T F ++ ++ R+RELAFLN
Sbjct: 145 RYIRGKP----EAEVQETGTSEITGTKTTFKPDARIFETT-DFQYDILSNRLRELAFLNR 199
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDV-VGFRKDVDGITIDLA 239
LTI L K+ PE Q + ++GG+ E+V++LN K+PLH+ + F + D + +++A
Sbjct: 200 GLTINL-KDLRSPE-GQAETFIYSGGIVEFVEYLNKKKQPLHEKPIYFERQRDDMVVEIA 257
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
+Q+ +++Y++ + +AN+I T +GGTHI G K +LTR N K +K K+ D L+G+
Sbjct: 258 MQY-TNSYTENVYSFANNINTHEGGTHIIGFKTALTRVANDYIKANKLSKE-DAKLTGDD 315
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVXXXXXXX 359
VREGLT IISV++ P+FEGQTKTRLGN EV+ +VD V + L EY E +P V
Sbjct: 316 VREGLTAIISVKLMEPQFEGQTKTRLGNSEVKGIVDSLVTDGLAEYFEENPKVANVILEK 375
Query: 360 XXXXXXXXXXXXXXXXXVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
R+KS L S+LPGKLADCS P EI+IVEG+SAGGSAKQ
Sbjct: 376 ALLAQKAREAAKKARELTRRKSALEVSTLPGKLADCSEKDPSVCEIYIVEGNSAGGSAKQ 435
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRDR FQAILPLRGKILNVE+ A + KN E+ +LI ALG GV EDF E+ RYHK+I
Sbjct: 436 GRDRGFQAILPLRGKILNVEKSRLAKILKNNEVVSLITALGTGVS-EDFALESARYHKVI 494
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
++TDADVDGAHIRTLLLT F+RY + L D G +Y+ PPLY++++GK Y + D EL+
Sbjct: 495 LMTDADVDGAHIRTLLLTLFFRYMRPLIDAGYVYIAQPPLYRIKKGKSEYYIHSDRELEV 554
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
K L +IQR+KGLGEM P QLWETT+NPE R L Q+ +EDA A+ +F LMG
Sbjct: 555 KKKELGEKGL-AIQRYKGLGEMNPEQLWETTMNPESRTLLQVTLEDALRADEIFRVLMGD 613
Query: 600 RVDTRKELIQ-NAANLVNLD 618
V+ R+ I+ +A +V+LD
Sbjct: 614 EVEPRRNFIETHAKEVVDLD 633
>TIGR_CMR|BA_0005 [details] [associations]
symbol:BA_0005 "DNA gyrase, B subunit" species:198094
"Bacillus anthracis str. Ames" [GO:0003916 "DNA topoisomerase
activity" evidence=ISS] [GO:0003918 "DNA topoisomerase type II
(ATP-hydrolyzing) activity" evidence=ISS] [GO:0006265 "DNA
topological change" evidence=ISS] [GO:0009330 "DNA topoisomerase
complex (ATP-hydrolyzing)" evidence=ISS] HAMAP:MF_01898
InterPro:IPR001241 InterPro:IPR002288 InterPro:IPR003594
InterPro:IPR011557 InterPro:IPR013506 InterPro:IPR013759
InterPro:IPR013760 InterPro:IPR018522 Pfam:PF00204 Pfam:PF00986
Pfam:PF02518 PRINTS:PR00418 PROSITE:PS00177 SMART:SM00387
SMART:SM00433 Pfam:PF01751 InterPro:IPR006171 GO:GO:0005524
GO:GO:0005737 GO:GO:0005694 EMBL:AE016879 EMBL:AE017334
EMBL:AE017225 GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR Gene3D:3.30.565.10 SUPFAM:SSF55874
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 GO:GO:0006265 GO:GO:0003918 SUPFAM:SSF56719
eggNOG:COG0187 HOGENOM:HOG000075155 KO:K02470 Gene3D:3.40.50.670
TIGRFAMs:TIGR01059 PROSITE:PS50880 OMA:IFETTEF EMBL:AF090333
RefSeq:NP_842577.1 RefSeq:YP_016608.1 RefSeq:YP_026296.1
ProteinModelPortal:Q9X3Y6 PRIDE:Q9X3Y6 DNASU:1083919
EnsemblBacteria:EBBACT00000010328 EnsemblBacteria:EBBACT00000015641
EnsemblBacteria:EBBACT00000021045 GeneID:1083919 GeneID:2816408
GeneID:2848886 KEGG:ban:BA_0005 KEGG:bar:GBAA_0005 KEGG:bat:BAS0005
ProtClustDB:PRK05644 BioCyc:BANT260799:GJAJ-5-MONOMER
BioCyc:BANT261594:GJ7F-5-MONOMER Uniprot:Q9X3Y6
Length = 640
Score = 1424 (506.3 bits), Expect = 9.3e-146, P = 9.3e-146
Identities = 292/622 (46%), Positives = 398/622 (63%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST +GLHHLV+EI+DN++DEA AGY I V++ DNS+ V DNGRGIP+ +
Sbjct: 31 MYIGSTSGKGLHHLVWEIVDNSIDEALAGYCDEINVSIEEDNSIRVTDNGRGIPVGIQEK 90
Query: 61 TNKSALETVLTVLHAXXXXXXXXXXXXXXXXXXXXXXXXXNALSESLEVTVWRDGMEYHQ 120
+ A+E ++TVLHA NALS LEV V R+G ++Q
Sbjct: 91 MGRPAVEVIMTVLHAGGKFGGGGYKVSGGLHGVGASVV--NALSTELEVFVHREGKIHYQ 148
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF--TTAIQFDHNTIAGRIRELAFL 178
KY RG PV L + D+ GT RF PD ++F TT +FD T+A R+RELAFL
Sbjct: 149 KYERGIPVADLKV----IGDTDQTGTITRFKPDPEIFQETTVYEFD--TLATRMRELAFL 202
Query: 179 NPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDV-VGFRKDVDGITID 237
N + + + ED K Q E+ + GG++ YV+ LN K+P+H+ V DGI ++
Sbjct: 203 NRNIKLTI--EDKREHK-QKKEFHYEGGIKSYVEHLNRSKQPIHEEPVYVEGSKDGIQVE 259
Query: 238 LALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSG 297
++LQ+ ++ Y++ + + N+I T +GGTH G K +LTR +N G+K+ +KD D +L+G
Sbjct: 260 VSLQY-NEGYTNNIYSFTNNIHTYEGGTHEVGFKTALTRVINDYGRKNSILKDADSNLTG 318
Query: 298 EHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVXXXXX 357
E VREGLT I+S++ PNP+FEGQTKT+LGN E R + + E ++L +P+V
Sbjct: 319 EDVREGLTAIVSIKHPNPQFEGQTKTKLGNSEARTITESVFSEAFEKFLLENPNVARKIV 378
Query: 358 XXXXXXXXXXXXXXXXXXXVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSA 417
R+KS L SSLPGKLADCSS P SEI+IVEGDSAGGSA
Sbjct: 379 EKGTMAARARVAAKKARELTRRKSALEVSSLPGKLADCSSKDPAISEIYIVEGDSAGGSA 438
Query: 418 KQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHK 477
KQGRDR FQAILPL+GKI+NVE+ + N+E++ +I A+G + G DF E RYHK
Sbjct: 439 KQGRDRHFQAILPLKGKIINVEKARLDKILSNDEVRTIITAIGTNIGG-DFDIEKARYHK 497
Query: 478 IIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAEL 537
+II+TDADVDGAHIRTLLLTFFYRY + + + G IY+ PPL+KV++GK++QY Y++ EL
Sbjct: 498 VIIMTDADVDGAHIRTLLLTFFYRYMRQIIEHGYIYIAQPPLFKVQQGKKIQYAYNEKEL 557
Query: 538 KKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLM 597
+K+ + P+ IQR+KGLGEM P QLWETT++PE R L Q+ ++DA EA+ F LM
Sbjct: 558 EKILAELPAQPKPGIQRYKGLGEMNPTQLWETTMDPEVRSLLQVSLQDAIEADETFEILM 617
Query: 598 GARVDTRKELIQ-NAANLVNLD 618
G +V+ R+ IQ NA + NLD
Sbjct: 618 GDKVEPRRNFIQENAKYVKNLD 639
>UNIPROTKB|Q8A277 [details] [associations]
symbol:gyrB "DNA gyrase subunit B" species:226186
"Bacteroides thetaiotaomicron VPI-5482" [GO:0003918 "DNA
topoisomerase type II (ATP-hydrolyzing) activity" evidence=IBA]
[GO:0006261 "DNA-dependent DNA replication" evidence=IBA]
[GO:0006265 "DNA topological change" evidence=IBA] [GO:0007059
"chromosome segregation" evidence=IBA] [GO:0009295 "nucleoid"
evidence=IBA] HAMAP:MF_01898 InterPro:IPR001241 InterPro:IPR002288
InterPro:IPR003594 InterPro:IPR011557 InterPro:IPR013506
InterPro:IPR013759 InterPro:IPR013760 InterPro:IPR018522
Pfam:PF00204 Pfam:PF00986 Pfam:PF02518 PRINTS:PR00418
PROSITE:PS00177 SMART:SM00387 SMART:SM00433 Pfam:PF01751
InterPro:IPR006171 GO:GO:0005524 GO:GO:0005737 GO:GO:0005694
GO:GO:0007059 GO:GO:0006261 Gene3D:3.30.565.10 SUPFAM:SSF55874
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 EMBL:AE015928 GenomeReviews:AE015928_GR
GO:GO:0009295 GO:GO:0006265 GO:GO:0003918 SUPFAM:SSF56719 KO:K02470
Gene3D:3.40.50.670 TIGRFAMs:TIGR01059 OMA:IFETTEF
ProtClustDB:PRK05644 HOGENOM:HOG000075154 HSSP:P06982
RefSeq:NP_812341.1 ProteinModelPortal:Q8A277 GeneID:1074051
KEGG:bth:BT_3429 PATRIC:21061865
BioCyc:BTHE226186:GJXV-3494-MONOMER Uniprot:Q8A277
Length = 653
Score = 1347 (479.2 bits), Expect = 1.3e-137, P = 1.3e-137
Identities = 282/629 (44%), Positives = 396/629 (62%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG +GLHHLVYEI+DN++DEA AGY +IEV + DNS++V DNGRGIP+D H
Sbjct: 33 MYIGDISIKGLHHLVYEIVDNSIDEALAGYCDHIEVTINEDNSITVQDNGRGIPVDYHEK 92
Query: 61 TNKSALETVLTVLHAXXXXXXXXXXXXXXXXXXXXXXXXXNALSESLEVTVWRDGMEYHQ 120
KSALE +TVLHA NALS + V+R+G Y Q
Sbjct: 93 EKKSALEVAMTVLHAGGKFDKGSYKVSGGLHGVGMSCV--NALSTHMTTQVFRNGKIYQQ 150
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y GKP+ + V V D GTR +FWPD +FT + +D+ +A R+RELA+LN
Sbjct: 151 EYEIGKPLYS----VKEVGVSDITGTRQQFWPDDTIFTETV-YDYKILASRLRELAYLNA 205
Query: 181 KLTIAL--RKEDSDPEKNQYNEYFFAG-GLEEYVQWLNTDKKPL-HDVVGFRKDVDGITI 236
L I+L R+ ++ + + +E F++ GL E+V+++ + ++ L +DV+ + GI I
Sbjct: 206 GLRISLTDRRVVNEEDGSFKSEVFYSEEGLREFVRFIESSREHLINDVIYLNSEKQGIPI 265
Query: 237 DLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLS 296
++A+ + + +S+ + Y N+I TI+GGTH+ G + +LTRTL + SK ++ + +S
Sbjct: 266 EIAIMY-NTGFSENVHSYVNNINTIEGGTHLAGFRRALTRTLKKYAEDSKMLEKVKVEIS 324
Query: 297 GEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVXXXX 356
G+ REGLT +ISV+V P+FEGQTKT+LGN EV VDQ+V E L YLE HP
Sbjct: 325 GDDFREGLTAVISVKVAEPQFEGQTKTKLGNNEVMGAVDQAVGEVLAYYLEEHPKEAKTI 384
Query: 357 XXXXXXXXXXXXXXXXXXXXVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGS 416
V++KS + LPGKLADCS P + E+F+VEGDSAGG+
Sbjct: 385 VDKVILAATARHAARKAREMVQRKSPMSGGGLPGKLADCSDKDPSKCELFLVEGDSAGGT 444
Query: 417 AKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEA---- 472
AKQGR+R FQAILPLRGKILNVE+ +++EI+N+ ALG+ + ED KEA
Sbjct: 445 AKQGRNRMFQAILPLRGKILNVEKAMYHKALESDEIRNIYTALGVTIGTEDDSKEANIEK 504
Query: 473 LRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCY 532
LRYHKIII+TDADVDG+HI TL++TFF+RY + G +Y+ PPLY ++GK +YC+
Sbjct: 505 LRYHKIIIMTDADVDGSHIDTLIMTFFFRYMPQIIQNGYLYIATPPLYLCKKGKVEEYCW 564
Query: 533 DDAELKKVKSSFPS---NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEA 589
DA+ +K ++ NA+++ QR+KGLGEM QLWETT++P+ RMLKQ+ I++AAEA
Sbjct: 565 TDAQRQKFIDTYGGGLENAVHT-QRYKGLGEMNAQQLWETTMDPDNRMLKQVNIDNAAEA 623
Query: 590 NVVFSSLMGARVDTRKELIQNAANLVNLD 618
+ +FS LMG V R+E I+ A N+D
Sbjct: 624 DYIFSMLMGEDVGPRREFIEENATYANID 652
>TIGR_CMR|DET_0004 [details] [associations]
symbol:DET_0004 "DNA gyrase, B subunit" species:243164
"Dehalococcoides ethenogenes 195" [GO:0003918 "DNA topoisomerase
type II (ATP-hydrolyzing) activity" evidence=ISS] [GO:0006265 "DNA
topological change" evidence=ISS] [GO:0009330 "DNA topoisomerase
complex (ATP-hydrolyzing)" evidence=ISS] HAMAP:MF_01898
InterPro:IPR001241 InterPro:IPR002288 InterPro:IPR003594
InterPro:IPR011557 InterPro:IPR013506 InterPro:IPR013759
InterPro:IPR013760 InterPro:IPR018522 Pfam:PF00204 Pfam:PF00986
Pfam:PF02518 PRINTS:PR00418 PROSITE:PS00177 SMART:SM00387
SMART:SM00433 Pfam:PF01751 InterPro:IPR006171 GO:GO:0005524
GO:GO:0005737 GO:GO:0005694 GO:GO:0006261 EMBL:CP000027
GenomeReviews:CP000027_GR Gene3D:3.30.565.10 SUPFAM:SSF55874
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 GO:GO:0006265 GO:GO:0003918 SUPFAM:SSF56719
eggNOG:COG0187 HOGENOM:HOG000075155 KO:K02470 Gene3D:3.40.50.670
TIGRFAMs:TIGR01059 OMA:IFETTEF ProtClustDB:PRK05644
RefSeq:YP_180759.1 ProteinModelPortal:Q3ZAJ0 STRING:Q3ZAJ0
GeneID:3229139 KEGG:det:DET0004 PATRIC:21607113
BioCyc:DETH243164:GJNF-4-MONOMER Uniprot:Q3ZAJ0
Length = 642
Score = 1344 (478.2 bits), Expect = 2.8e-137, P = 2.8e-137
Identities = 286/620 (46%), Positives = 384/620 (61%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLVYEI+ N+VDEA AG I+V + D SVSV DNGRGIPID+HP
Sbjct: 36 MYIGSTDQRGLHHLVYEIVYNSVDEAMAGVCDRIKVIIYKDGSVSVEDNGRGIPIDIHPV 95
Query: 61 TNKSALETVLTVLHAXXXXXXXXXXXXXXXXXXXXXXXXXNALSESLEVTVWRDGMEYHQ 120
T SALETV+TVLHA NAL+E V V R+G Y Q
Sbjct: 96 TKISALETVMTVLHAGAKFGGKTYQVSGGLHGVGASVV--NALAEWTTVKVRRNGKIYQQ 153
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
Y RGKP T L V D GT F D Q+F+T ++D T+ R+RE+A+LN
Sbjct: 154 SYQRGKPSTPLE----EVGVSDGSGTTTIFKADSQIFSTT-EYDFETLTDRLREIAYLNK 208
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLA 239
L + + E SD E+ Y+F GG+ +V+ LN +++ H + K D +++A
Sbjct: 209 GLEVYIYDEQSDQERT----YYFEGGITGFVRHLNRNREVRHRQPIYITKKSDSTILEVA 264
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
+Q+ +D YSD+ L +AN + TIDGGTH+ G +++LTR N KSK +KD D +L G+
Sbjct: 265 IQY-NDGYSDSTLTFANCVNTIDGGTHLTGFRSALTRAFNDYAHKSKFLKDTDPNLMGDD 323
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVXXXXXXX 359
VREG+ I+SV++P P+FEGQTK +LGN E++ V+ +V E L+ YLE HPD
Sbjct: 324 VREGIVAIVSVKLPEPQFEGQTKGKLGNIEIKSFVESAVTEQLSLYLEEHPDDTKRILEK 383
Query: 360 XXXXXXXXXXXXXXXXXVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
+ +KS L + +LPGKLADCS E+F+VEGDSAGGSAKQ
Sbjct: 384 CITAAKAREAARKARDLIIRKSALDTGTLPGKLADCSERDASLCELFLVEGDSAGGSAKQ 443
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GR+RRFQAILPLRGKILNVE+ M +EEI+ +I AL G+ DF LRY++++
Sbjct: 444 GRNRRFQAILPLRGKILNVEKASPDKMLAHEEIRAIITALAAGIDN-DFDPAKLRYNRLV 502
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
++TDADVDG+HIRTLLLTFF+R+ L E +++ PPLYK++ G + Y+DAE +
Sbjct: 503 LMTDADVDGSHIRTLLLTFFFRHMPRLITESHLFIAQPPLYKIKIGSNEHWVYNDAEKET 562
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
+ S SN + IQR+KGLGEM QLW+TT++P R L ++ +EDAA+A+ +F+ LMG
Sbjct: 563 LLSQTKSNKV-DIQRYKGLGEMSAEQLWKTTMDPASRTLLEVKVEDAAKADQIFNLLMGG 621
Query: 600 RVDTRKELIQNAANLV-NLD 618
V RK IQ+ + V NLD
Sbjct: 622 EVAPRKAFIQSHSKTVKNLD 641
>UNIPROTKB|Q74H89 [details] [associations]
symbol:gyrB "DNA gyrase subunit B" species:243231
"Geobacter sulfurreducens PCA" [GO:0003918 "DNA topoisomerase type
II (ATP-hydrolyzing) activity" evidence=IBA] [GO:0006261
"DNA-dependent DNA replication" evidence=IBA] [GO:0006265 "DNA
topological change" evidence=IBA] [GO:0007059 "chromosome
segregation" evidence=IBA] [GO:0009295 "nucleoid" evidence=IBA]
HAMAP:MF_01898 InterPro:IPR001241 InterPro:IPR002288
InterPro:IPR003594 InterPro:IPR011557 InterPro:IPR013506
InterPro:IPR013759 InterPro:IPR013760 InterPro:IPR018522
Pfam:PF00204 Pfam:PF00986 Pfam:PF02518 PRINTS:PR00418
PROSITE:PS00177 SMART:SM00387 SMART:SM00433 Pfam:PF01751
InterPro:IPR006171 GO:GO:0005524 GO:GO:0005737 GO:GO:0005694
GO:GO:0007059 GO:GO:0006261 EMBL:AE017180 GenomeReviews:AE017180_GR
Gene3D:3.30.565.10 SUPFAM:SSF55874 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0009295
GO:GO:0006265 GO:GO:0003918 SUPFAM:SSF56719 HOGENOM:HOG000075155
KO:K02470 Gene3D:3.40.50.670 TIGRFAMs:TIGR01059 OMA:IFETTEF
ProtClustDB:PRK14939 HSSP:P06982 RefSeq:NP_951065.1
ProteinModelPortal:Q74H89 SMR:Q74H89 GeneID:2686080
KEGG:gsu:GSU0003 PATRIC:22022743 BioCyc:GSUL243231:GH27-3-MONOMER
Uniprot:Q74H89
Length = 795
Score = 1161 (413.8 bits), Expect = 5.8e-137, Sum P(2) = 5.8e-137
Identities = 236/539 (43%), Positives = 341/539 (63%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST +GLHHLVYEI+DN++DEA AGY + + V + D S++V DNGRGIP D+HP
Sbjct: 29 MYIGSTAAQGLHHLVYEIVDNSIDEALAGYCNEVNVTIHLDGSLTVVDNGRGIPTDIHPT 88
Query: 61 TNKSALETVLTVLHAXXXXXXXXXXXXXXXXXXXXXXXXXNALSESLEVTVWRDGMEYHQ 120
K A E LTVLHA NALS LE+ + RDG Y Q
Sbjct: 89 EGKPAAEVALTVLHAGGKFDNTSYKVSGGLHGVGVSVV--NALSRKLELEIRRDGKVYRQ 146
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
Y+ G P T L V+ ++K R GT+I F PD +F T +F + ++ R+RELAFLN
Sbjct: 147 SYACGDPQTPL--EVMG-ETKKR-GTKITFLPDDTIFETT-EFSFDVLSQRLRELAFLNA 201
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDV-VGFRKDVDGITIDLA 239
+ I + E E+ +++++ + GG+ +V++LN ++ LH + F+ + G+ +++A
Sbjct: 202 GVRITITDER---EEGKHHDFHYEGGIVSFVEYLNRNRTALHPKPIYFKGEKAGVEMEVA 258
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
LQ+ +D+Y + + +AN+I T +GGTH+ G +A+LTRT+N+ ++ +K + +++SGE
Sbjct: 259 LQY-NDSYDEKVFSFANNINTHEGGTHLVGFRAALTRTMNTYAAANELLKKEKVAISGED 317
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVXXXXXXX 359
+REGLT +ISV++P P+FEGQTKT+LGN EV+ V+ + E L +LE +P +
Sbjct: 318 LREGLTAVISVKIPQPQFEGQTKTKLGNSEVKGYVESLMNEKLAVFLEENPKIAKDIIGK 377
Query: 360 XXXXXXXXXXXXXXXXXVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
R+K L S+LPGKLADC P E+++VEGDSAGGSAKQ
Sbjct: 378 SIEAARAREAARKARELTRRKGALDISNLPGKLADCQERDPALCELYLVEGDSAGGSAKQ 437
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRDR+FQAILPL+GKILNVE+ M ++EI LI ALG G+ +DF LRYH+II
Sbjct: 438 GRDRKFQAILPLKGKILNVEKARFDKMLSSQEIGTLITALGTGIGKDDFDIAKLRYHRII 497
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELK 538
++TDADVDG+HI TLLLTFF+R + + G +Y+ PPLYKV+RG++ Y ++A ++
Sbjct: 498 VMTDADVDGSHILTLLLTFFFRQMPEVVERGHLYIAQPPLYKVKRGRKELYLRNEAAMQ 556
Score = 201 (75.8 bits), Expect = 5.8e-137, Sum P(2) = 5.8e-137
Identities = 41/69 (59%), Positives = 52/69 (75%)
Query: 551 SIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELI-Q 609
SIQR+KGLGEM P QLWETT+ P R L Q+ IEDA EA+ +F+ LMG +V+ R++ I Q
Sbjct: 726 SIQRYKGLGEMNPEQLWETTMEPVNRTLLQVKIEDAIEADTIFTILMGDQVEPRRDFIEQ 785
Query: 610 NAANLVNLD 618
NA N+ NLD
Sbjct: 786 NALNVSNLD 794
>TIGR_CMR|GSU_0003 [details] [associations]
symbol:GSU_0003 "DNA gyrase, B subunit" species:243231
"Geobacter sulfurreducens PCA" [GO:0003918 "DNA topoisomerase type
II (ATP-hydrolyzing) activity" evidence=ISS] [GO:0006260 "DNA
replication" evidence=ISS] [GO:0006265 "DNA topological change"
evidence=ISS] [GO:0009330 "DNA topoisomerase complex
(ATP-hydrolyzing)" evidence=ISS] HAMAP:MF_01898 InterPro:IPR001241
InterPro:IPR002288 InterPro:IPR003594 InterPro:IPR011557
InterPro:IPR013506 InterPro:IPR013759 InterPro:IPR013760
InterPro:IPR018522 Pfam:PF00204 Pfam:PF00986 Pfam:PF02518
PRINTS:PR00418 PROSITE:PS00177 SMART:SM00387 SMART:SM00433
Pfam:PF01751 InterPro:IPR006171 GO:GO:0005524 GO:GO:0005737
GO:GO:0005694 GO:GO:0007059 GO:GO:0006261 EMBL:AE017180
GenomeReviews:AE017180_GR Gene3D:3.30.565.10 SUPFAM:SSF55874
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 GO:GO:0009295 GO:GO:0006265 GO:GO:0003918
SUPFAM:SSF56719 HOGENOM:HOG000075155 KO:K02470 Gene3D:3.40.50.670
TIGRFAMs:TIGR01059 OMA:IFETTEF ProtClustDB:PRK14939 HSSP:P06982
RefSeq:NP_951065.1 ProteinModelPortal:Q74H89 SMR:Q74H89
GeneID:2686080 KEGG:gsu:GSU0003 PATRIC:22022743
BioCyc:GSUL243231:GH27-3-MONOMER Uniprot:Q74H89
Length = 795
Score = 1161 (413.8 bits), Expect = 5.8e-137, Sum P(2) = 5.8e-137
Identities = 236/539 (43%), Positives = 341/539 (63%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST +GLHHLVYEI+DN++DEA AGY + + V + D S++V DNGRGIP D+HP
Sbjct: 29 MYIGSTAAQGLHHLVYEIVDNSIDEALAGYCNEVNVTIHLDGSLTVVDNGRGIPTDIHPT 88
Query: 61 TNKSALETVLTVLHAXXXXXXXXXXXXXXXXXXXXXXXXXNALSESLEVTVWRDGMEYHQ 120
K A E LTVLHA NALS LE+ + RDG Y Q
Sbjct: 89 EGKPAAEVALTVLHAGGKFDNTSYKVSGGLHGVGVSVV--NALSRKLELEIRRDGKVYRQ 146
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
Y+ G P T L V+ ++K R GT+I F PD +F T +F + ++ R+RELAFLN
Sbjct: 147 SYACGDPQTPL--EVMG-ETKKR-GTKITFLPDDTIFETT-EFSFDVLSQRLRELAFLNA 201
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDV-VGFRKDVDGITIDLA 239
+ I + E E+ +++++ + GG+ +V++LN ++ LH + F+ + G+ +++A
Sbjct: 202 GVRITITDER---EEGKHHDFHYEGGIVSFVEYLNRNRTALHPKPIYFKGEKAGVEMEVA 258
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
LQ+ +D+Y + + +AN+I T +GGTH+ G +A+LTRT+N+ ++ +K + +++SGE
Sbjct: 259 LQY-NDSYDEKVFSFANNINTHEGGTHLVGFRAALTRTMNTYAAANELLKKEKVAISGED 317
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVXXXXXXX 359
+REGLT +ISV++P P+FEGQTKT+LGN EV+ V+ + E L +LE +P +
Sbjct: 318 LREGLTAVISVKIPQPQFEGQTKTKLGNSEVKGYVESLMNEKLAVFLEENPKIAKDIIGK 377
Query: 360 XXXXXXXXXXXXXXXXXVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
R+K L S+LPGKLADC P E+++VEGDSAGGSAKQ
Sbjct: 378 SIEAARAREAARKARELTRRKGALDISNLPGKLADCQERDPALCELYLVEGDSAGGSAKQ 437
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRDR+FQAILPL+GKILNVE+ M ++EI LI ALG G+ +DF LRYH+II
Sbjct: 438 GRDRKFQAILPLKGKILNVEKARFDKMLSSQEIGTLITALGTGIGKDDFDIAKLRYHRII 497
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELK 538
++TDADVDG+HI TLLLTFF+R + + G +Y+ PPLYKV+RG++ Y ++A ++
Sbjct: 498 VMTDADVDGSHILTLLLTFFFRQMPEVVERGHLYIAQPPLYKVKRGRKELYLRNEAAMQ 556
Score = 201 (75.8 bits), Expect = 5.8e-137, Sum P(2) = 5.8e-137
Identities = 41/69 (59%), Positives = 52/69 (75%)
Query: 551 SIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELI-Q 609
SIQR+KGLGEM P QLWETT+ P R L Q+ IEDA EA+ +F+ LMG +V+ R++ I Q
Sbjct: 726 SIQRYKGLGEMNPEQLWETTMEPVNRTLLQVKIEDAIEADTIFTILMGDQVEPRRDFIEQ 785
Query: 610 NAANLVNLD 618
NA N+ NLD
Sbjct: 786 NALNVSNLD 794
>UNIPROTKB|Q8FA30 [details] [associations]
symbol:gyrB "DNA gyrase subunit B" species:189518
"Leptospira interrogans serovar Lai str. 56601" [GO:0003918 "DNA
topoisomerase type II (ATP-hydrolyzing) activity" evidence=IBA]
[GO:0006261 "DNA-dependent DNA replication" evidence=IBA]
[GO:0006265 "DNA topological change" evidence=IBA] [GO:0007059
"chromosome segregation" evidence=IBA] [GO:0009295 "nucleoid"
evidence=IBA] HAMAP:MF_01898 InterPro:IPR001241 InterPro:IPR002288
InterPro:IPR003594 InterPro:IPR011557 InterPro:IPR013506
InterPro:IPR013759 InterPro:IPR013760 InterPro:IPR018522
Pfam:PF00204 Pfam:PF00986 Pfam:PF02518 PRINTS:PR00418
PROSITE:PS00177 SMART:SM00387 SMART:SM00433 Pfam:PF01751
InterPro:IPR006171 GO:GO:0005524 GO:GO:0005737 GO:GO:0005694
GO:GO:0007059 GO:GO:0006261 Gene3D:3.30.565.10 SUPFAM:SSF55874
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 GO:GO:0009295 GO:GO:0006265 GO:GO:0003918
SUPFAM:SSF56719 HOGENOM:HOG000075155 KO:K02470 Gene3D:3.40.50.670
TIGRFAMs:TIGR01059 OMA:IFETTEF ProtClustDB:PRK05644 EMBL:AE010300
GenomeReviews:AE010300_GR HSSP:P06982 RefSeq:NP_710186.1
ProteinModelPortal:Q8FA30 GeneID:1149348 KEGG:lil:LA_0005
PATRIC:22380849 BioCyc:LINT189518:GJBB-5-MONOMER Uniprot:Q8FA30
Length = 639
Score = 1325 (471.5 bits), Expect = 2.9e-135, P = 2.9e-135
Identities = 267/620 (43%), Positives = 386/620 (62%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG+ GLH +VYE++DN+VDEA AG+ + I++++L DN V V DNGRGIP+D+HP
Sbjct: 28 MYIGTQDETGLHKMVYEVVDNSVDEAMAGHCTEIKISILPDNIVEVKDNGRGIPVDIHPD 87
Query: 61 TNKSALETVLTVLHAXXXXXXXXXXXXXXXXXXXXXXXXXNALSESLEVTVWRDGMEYHQ 120
S +E V+T+LHA NALSE LEV V + G Y Q
Sbjct: 88 KKISTIEVVMTILHAGGKFENDAYKVSGGLHGVGVSVV--NALSEYLEVEVHQKGKVYTQ 145
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
KY +G PV+++ + DS +R GT +RF PD +FTT + F + ++ R RELAFLN
Sbjct: 146 KYEKGVPVSSVQ---IQGDSSER-GTIVRFKPDATIFTT-VDFQFDVLSARFRELAFLNK 200
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGITIDLAL 240
L + + E NE+ F+GG+ +V+ +N +K P+H V+ F ++ D + ++++
Sbjct: 201 GLVLVVEDHRRGKENILRNEFQFSGGIVSFVEHINENKHPMHKVIHFERNKDDVLAEISI 260
Query: 241 QWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKD-ISLSGEH 299
Q+ S+ Y++ + + N+I GGTH+EG +A+LTRTLN KK T+ K LSGE
Sbjct: 261 QY-SETYTENIFCFTNNINNNLGGTHLEGFRAALTRTLNDFLKKDSTLSKKHPTGLSGED 319
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVXXXXXXX 359
V+EGLT +IS+++P P+F QTK +L N E++ ++ E LT + E +P++
Sbjct: 320 VKEGLTAVISIKIPQPQFNSQTKEKLVNAEIKGIMQTLSSEGLTLFFEENPNITKKILEK 379
Query: 360 XXXXXXXXXXXXXXXXXVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
R+K+VL LPGKLADCS P SE+++VEGDSAGGSAKQ
Sbjct: 380 CILSAKAREAARKARDLTRRKTVLEGGGLPGKLADCSEKDPAHSELYLVEGDSAGGSAKQ 439
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRDR QAILPL+GKILNVE+ + +EEI+ L+ ALG G+ ++F + +RYHKI+
Sbjct: 440 GRDRNTQAILPLKGKILNVEKARLDKILSSEEIRVLVSALGTGIGEDEFNIDKIRYHKIM 499
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDAD+DG+HIRTLLLTFF+RY + + + G +YV PPLY ++ GK Y Y D E ++
Sbjct: 500 IMTDADIDGSHIRTLLLTFFFRYMRPVIERGYLYVAQPPLYLIKHGKNSTYVYSDKEKEE 559
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
+ + + + IQR+KGLGEM P QLWETT++P R++ ++ ++D EA F+ LMG
Sbjct: 560 LLKNIGAEKVV-IQRYKGLGEMNPEQLWETTMDPSNRVVLKVKLDDFVEAEETFNVLMGD 618
Query: 600 RVDTRKELIQ-NAANLVNLD 618
V RK+ I+ NAA + NLD
Sbjct: 619 EVQPRKQFIEVNAAKVANLD 638
>UNIPROTKB|O08399 [details] [associations]
symbol:gyrB "DNA gyrase subunit B" species:243276
"Treponema pallidum subsp. pallidum str. Nichols" [GO:0005515
"protein binding" evidence=IPI] HAMAP:MF_01898 InterPro:IPR001241
InterPro:IPR002288 InterPro:IPR003594 InterPro:IPR011557
InterPro:IPR013506 InterPro:IPR013759 InterPro:IPR013760
InterPro:IPR018522 Pfam:PF00204 Pfam:PF00986 Pfam:PF02518
PRINTS:PR00418 PROSITE:PS00177 SMART:SM00387 SMART:SM00433
Pfam:PF01751 InterPro:IPR006171 GO:GO:0005524 GO:GO:0005737
GO:GO:0005694 Gene3D:3.30.565.10 SUPFAM:SSF55874 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211 EMBL:AE000520
GenomeReviews:AE000520_GR GO:GO:0006265 GO:GO:0003918
SUPFAM:SSF56719 eggNOG:COG0187 KO:K02470 Gene3D:3.40.50.670
TIGRFAMs:TIGR01059 PROSITE:PS50880 OMA:IFETTEF ProtClustDB:PRK05644
EMBL:U78094 PIR:H71254 RefSeq:NP_219443.1 ProteinModelPortal:O08399
IntAct:O08399 GeneID:2610807 KEGG:tpa:TP1006 PATRIC:20532137
Uniprot:O08399
Length = 637
Score = 1314 (467.6 bits), Expect = 4.2e-134, P = 4.2e-134
Identities = 285/629 (45%), Positives = 383/629 (60%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGSTGP GLHHLVYE++DN +DEA AGY I V L N V V DNGRGIP+D+HP
Sbjct: 25 MYIGSTGPNGLHHLVYEVVDNCIDEAMAGYCDRITVVLEQGNVVRVEDNGRGIPVDVHPH 84
Query: 61 TNKSALETVLTVLHAXXXXXXXXXXXXXXXXXXXXXXXXXNALSESLEVTVWRDGMEYHQ 120
SALE VLT LHA NALS +EVTV+RDG EY+Q
Sbjct: 85 EGVSALEVVLTKLHAGGKFDKKSYKVSGGLHGVGVSVV--NALSLWVEVTVYRDGAEYYQ 142
Query: 121 KYSRGKPVTTLTCHVLPVDSK---DRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAF 177
K++ G P+ PV+ + +++GT IR+ D +F + +D + + R+RELAF
Sbjct: 143 KFNVGMPLA-------PVEKRGVSEKRGTIIRWQADPSIFKETVAYDFDVLLTRLRELAF 195
Query: 178 LNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDK-----KPLHDVVGFRKDVD 232
LN + I LR E K E+ F GG+ +V +LN K +PL+ + G + DV
Sbjct: 196 LNSTVVIQLRDERLATAKQV--EFAFEGGIRHFVSYLNRGKSVVPERPLY-IEGSKSDV- 251
Query: 233 GITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKS-KTVK-- 289
+++ALQ+ D Y++ + + N I T +GGTH+EG K++LTR N KKS K K
Sbjct: 252 --LVEVALQY-HDGYTENVQSFVNDINTREGGTHLEGFKSALTRVANDFLKKSPKLAKKI 308
Query: 290 DKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELH 349
+++ L GE VR GLT ++SV++P P+FEGQTKT+LGN EVR +VD V E LT Y E +
Sbjct: 309 EREEKLVGEDVRAGLTVVLSVKIPEPQFEGQTKTKLGNSEVRGIVDSLVGERLTLYFEQN 368
Query: 350 PDVXXXXXXXXXXXXXXXXXXXXXXXXVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVE 409
P V R+KS + S LPGKLADCS P + E++IVE
Sbjct: 369 PGVLTKILEKSIAEAQARLAARRAKEAARRKSGMDSFGLPGKLADCSLKDPAKCEVYIVE 428
Query: 410 GDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFK 469
GDSAGGSAK+GRD + QAILPL GK+LNVE+ + NE++Q +I LG GV G+DF
Sbjct: 429 GDSAGGSAKKGRDSKTQAILPLWGKMLNVEKTRLDKVLHNEKLQPIIATLGTGV-GKDFD 487
Query: 470 KEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQ 529
+RYHK+II+ DADVDG+HIRTLLLTFF+RY + + G +Y+ +PPLY++ K+
Sbjct: 488 LTRIRYHKVIIMADADVDGSHIRTLLLTFFFRYLPQIIEAGYVYLAMPPLYRIAWSKKEL 547
Query: 530 YCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEA 589
Y Y D E + S + ++QR+KGLGEM QLWETT+NP +R + Q+V+ DA EA
Sbjct: 548 YVYSDTERDEALESIGKKSGVAVQRYKGLGEMDGTQLWETTMNPVRRKMMQVVLSDAVEA 607
Query: 590 NVVFSSLMGARVDTRKELIQNAANLVNLD 618
+ VFS+LMG V+ R++ I+ A LD
Sbjct: 608 DRVFSTLMGEDVEPRRKFIEENAIYARLD 636
>UNIPROTKB|Q3KMH2 [details] [associations]
symbol:gyrB_1 "DNA gyrase subunit B" species:315277
"Chlamydia trachomatis A/HAR-13" [GO:0003918 "DNA topoisomerase
type II (ATP-hydrolyzing) activity" evidence=IBA] [GO:0006261
"DNA-dependent DNA replication" evidence=IBA] [GO:0006265 "DNA
topological change" evidence=IBA] [GO:0007059 "chromosome
segregation" evidence=IBA] [GO:0009295 "nucleoid" evidence=IBA]
HAMAP:MF_01898 InterPro:IPR001241 InterPro:IPR002288
InterPro:IPR003594 InterPro:IPR011557 InterPro:IPR013506
InterPro:IPR013759 InterPro:IPR013760 InterPro:IPR018522
Pfam:PF00204 Pfam:PF00986 Pfam:PF02518 PRINTS:PR00418
PROSITE:PS00177 SMART:SM00387 SMART:SM00433 Pfam:PF01751
InterPro:IPR006171 GO:GO:0005524 GO:GO:0005737 GO:GO:0005694
GO:GO:0007059 GO:GO:0006261 Gene3D:3.30.565.10 SUPFAM:SSF55874
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 GO:GO:0009295 EMBL:CP000051
GenomeReviews:CP000051_GR GO:GO:0006265 GO:GO:0003918
SUPFAM:SSF56719 eggNOG:COG0187 HOGENOM:HOG000075155 KO:K02470
Gene3D:3.40.50.670 TIGRFAMs:TIGR01059 OMA:IFETTEF
ProtClustDB:PRK14939 RefSeq:YP_327998.1 ProteinModelPortal:Q3KMH2
STRING:Q3KMH2 GeneID:3687234 KEGG:cta:CTA_0208 PATRIC:32022282
BioCyc:CTRA315277:GI4C-250-MONOMER Uniprot:Q3KMH2
Length = 804
Score = 1144 (407.8 bits), Expect = 1.1e-133, Sum P(2) = 1.1e-133
Identities = 244/549 (44%), Positives = 334/549 (60%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG TG GLHHLVYE++DN++DEA AG+ + + V +L D +S++DNGRGIPI +H
Sbjct: 28 MYIGDTGVTGLHHLVYEVVDNSIDEAMAGFCTEVVVRILEDGGISISDNGRGIPIQIHEK 87
Query: 61 TNK------SALETVLTVLHAXXXXXXXXXXXXXXXXXXXXXXXXXNALSESLEVTVWRD 114
+ SALE VLTVLHA NALSE V++D
Sbjct: 88 ESAKQGREISALEVVLTVLHAGGKFDKDSYKVSGGLHGVGVSCV--NALSEKFIAKVFKD 145
Query: 115 GMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRE 174
G Y ++SRG P+TTL VL D++GT + F+PD +F+T + FD + R+RE
Sbjct: 146 GQAYSMEFSRGAPLTTL--QVL--GPTDKRGTEVLFYPDPAIFSTCV-FDRAILMKRLRE 200
Query: 175 LAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKK-----PLHDVVGFRK 229
LAFLN +TI ++D D ++ +F+ GG++ +V +LN +K+ P++ + G R
Sbjct: 201 LAFLNRGVTIVF-EDDRDTGFDKV-VFFYEGGIQSFVSYLNQNKEILFPNPIY-MQGSRP 257
Query: 230 DVDG-ITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTV 288
DG I + ALQW S YS+ + YAN+I T GGTH+ G +LTR +NS K
Sbjct: 258 GDDGDIEFEAALQWNS-GYSELIYSYANNIPTRQGGTHLTGFSTALTRAVNSYIKAHNLS 316
Query: 289 KDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLEL 348
K +SL+GE ++EGL I+SV+VPNP+FEGQTK +LGN +V V Q E LT + E
Sbjct: 317 KSDKLSLTGEDIKEGLVAIVSVKVPNPQFEGQTKQKLGNSDVGSVSQQISGEVLTTFFEE 376
Query: 349 HPDVXXXXXXXXXXXXXXXXXXXXXXXXVRQKSVLRSSSLPGKLADCSSTTPEESEIFIV 408
+P + +KS L S+ LPGKL DC PE+ E++IV
Sbjct: 377 NPQIAKTIVDKVFVAAQAREAAKRARELTLRKSALDSARLPGKLIDCLEKDPEKCEMYIV 436
Query: 409 EGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDF 468
EGDSAGGSAKQGRDRRFQAILP+RGKILNVE+ +++N+EI ++I ALG G+ ++F
Sbjct: 437 EGDSAGGSAKQGRDRRFQAILPIRGKILNVEKARLQKVFQNQEIGSIIAALGCGIGKDNF 496
Query: 469 KKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQV 528
LRY +III+TDADVDG+HIRTLLLTFFYR+ L + C+Y+ PPLY+V + K
Sbjct: 497 NLSKLRYKRIIIMTDADVDGSHIRTLLLTFFYRHMSALIENECVYIAQPPLYRVSKKKDF 556
Query: 529 QYCYDDAEL 537
+Y + E+
Sbjct: 557 RYILSEKEM 565
Score = 187 (70.9 bits), Expect = 1.1e-133, Sum P(2) = 1.1e-133
Identities = 36/71 (50%), Positives = 53/71 (74%)
Query: 552 IQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNA 611
IQR+KGLGEM QLW+TT+NPEQR L ++ ++DA EA+ +F+ LMG V R+E I++
Sbjct: 734 IQRYKGLGEMNADQLWDTTMNPEQRTLVRVSLKDAVEADHIFTMLMGEEVPPRREFIESH 793
Query: 612 ANLVNLDHLDI 622
A + +++LDI
Sbjct: 794 ALSIRMNNLDI 804
Score = 41 (19.5 bits), Expect = 2.8e-10, Sum P(2) = 2.8e-10
Identities = 12/39 (30%), Positives = 20/39 (51%)
Query: 433 GKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKE 471
G L+ + EAA+ NEE + I L G E+ +++
Sbjct: 643 GSYLHSHEEKEAAIAANEESASRILELYKGSVLEELQRD 681
>UNIPROTKB|Q9KVX3 [details] [associations]
symbol:gyrB "DNA gyrase subunit B" species:243277 "Vibrio
cholerae O1 biovar El Tor str. N16961" [GO:0003916 "DNA
topoisomerase activity" evidence=ISS] [GO:0003918 "DNA
topoisomerase type II (ATP-hydrolyzing) activity" evidence=ISS]
[GO:0006265 "DNA topological change" evidence=ISS] [GO:0009330 "DNA
topoisomerase complex (ATP-hydrolyzing)" evidence=ISS]
HAMAP:MF_01898 InterPro:IPR001241 InterPro:IPR002288
InterPro:IPR003594 InterPro:IPR011557 InterPro:IPR013506
InterPro:IPR013759 InterPro:IPR013760 InterPro:IPR018522
Pfam:PF00204 Pfam:PF00986 Pfam:PF02518 PRINTS:PR00418
PROSITE:PS00177 SMART:SM00387 SMART:SM00433 Pfam:PF01751
InterPro:IPR006171 GO:GO:0005524 GO:GO:0005737 GO:GO:0005694
EMBL:AE003852 GenomeReviews:AE003852_GR Gene3D:3.30.565.10
SUPFAM:SSF55874 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0009330 GO:GO:0006265
GO:GO:0003918 SUPFAM:SSF56719 eggNOG:COG0187 KO:K02470
Gene3D:3.40.50.670 TIGRFAMs:TIGR01059 PROSITE:PS50880 OMA:IFETTEF
ProtClustDB:PRK14939 PIR:H82376 RefSeq:NP_062599.1
ProteinModelPortal:Q9KVX3 SMR:Q9KVX3 PRIDE:Q9KVX3 DNASU:2615137
GeneID:2615137 KEGG:vch:VC0015 PATRIC:20079078 Uniprot:Q9KVX3
Length = 805
Score = 1119 (399.0 bits), Expect = 1.8e-131, Sum P(2) = 1.8e-131
Identities = 231/542 (42%), Positives = 329/542 (60%)
Query: 1 MYIGSTGP-RGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHP 59
MYIG T GLHH+V+E++DN++DEA AGY +I V + DNSVSV+D+GRGIP ++HP
Sbjct: 25 MYIGDTDDGTGLHHMVFEVVDNSIDEALAGYCKDIVVTIHEDNSVSVSDDGRGIPTEMHP 84
Query: 60 ATNKSALETVLTVLHAXXXXXXXXXXXXXXXXXXXXXXXXXNALSESLEVTVWRDGMEYH 119
SA E ++TVLHA NALSE + +T++R G +
Sbjct: 85 EEKVSAAEVIMTVLHAGGKFDDNSYKVSGGLHGVGVSVV--NALSEKVLLTIYRGGKIHS 142
Query: 120 QKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLN 179
Q Y G P L V +R GT +RFWP Q FT I+F ++ +A R+REL+FLN
Sbjct: 143 QTYHHGVPQAPLAV----VGETERTGTTVRFWPSAQTFTN-IEFHYDILAKRLRELSFLN 197
Query: 180 PKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKD-VDGITID 237
++I L E + +K+ + + GG++ +V LN +K P+H+ V F ++ DGI+++
Sbjct: 198 SGVSIKLTDEREEDKKDHF---MYEGGIQAFVTHLNRNKTPIHEKVFHFNQEREDGISVE 254
Query: 238 LALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSG 297
+A+QW +D + + + + N+I DGGTH+ G + +LTRTLN+ K K + SG
Sbjct: 255 VAMQW-NDGFQENIYCFTNNIPQRDGGTHLAGFRGALTRTLNNYMDKEGFSKKAQAATSG 313
Query: 298 EHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVXXXXX 357
+ REGLT ++SV+VP+P+F QTK +L + EV+ V+ ++ E L ++L +P
Sbjct: 314 DDAREGLTAVVSVKVPDPKFSSQTKDKLVSSEVKSAVESAMNEKLADFLAENPSEAKNVC 373
Query: 358 XXXXXXXXXXXXXXXXXXXVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSA 417
R+K L + LPGKLADC P SE++IVEGDSAGGSA
Sbjct: 374 SKIIDAARAREAARKAREMTRRKGALDLAGLPGKLADCQEKDPALSELYIVEGDSAGGSA 433
Query: 418 KQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHK 477
KQGR+R+ QAILPL+GKILNVE+ M ++E+ LI ALG G+ +++ + LRYH
Sbjct: 434 KQGRNRKNQAILPLKGKILNVEKARFDKMLSSQEVATLITALGCGIGRDEYNPDKLRYHN 493
Query: 478 IIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAEL 537
III+TDADVDG+HIRTLLLTFFYR L + G IY+ PPLYKV++GKQ QY D+ +
Sbjct: 494 IIIMTDADVDGSHIRTLLLTFFYRQMPELIERGYIYIAQPPLYKVKKGKQEQYIKDEEAM 553
Query: 538 KK 539
+
Sbjct: 554 NQ 555
Score = 191 (72.3 bits), Expect = 1.8e-131, Sum P(2) = 1.8e-131
Identities = 38/69 (55%), Positives = 52/69 (75%)
Query: 551 SIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQ- 609
SIQR+KGLGEM P QLWETT++PE R + Q+ IEDA A+ +F++LMG +V+ R+ I+
Sbjct: 736 SIQRYKGLGEMNPDQLWETTMDPETRRMMQVTIEDAVGADELFTTLMGDQVEPRRAFIET 795
Query: 610 NAANLVNLD 618
NA + NLD
Sbjct: 796 NALKVANLD 804
>TIGR_CMR|VC_0015 [details] [associations]
symbol:VC_0015 "DNA gyrase, subunit B" species:686 "Vibrio
cholerae O1 biovar El Tor" [GO:0003916 "DNA topoisomerase activity"
evidence=ISS] [GO:0003918 "DNA topoisomerase type II
(ATP-hydrolyzing) activity" evidence=ISS] [GO:0006265 "DNA
topological change" evidence=ISS] [GO:0009330 "DNA topoisomerase
complex (ATP-hydrolyzing)" evidence=ISS] HAMAP:MF_01898
InterPro:IPR001241 InterPro:IPR002288 InterPro:IPR003594
InterPro:IPR011557 InterPro:IPR013506 InterPro:IPR013759
InterPro:IPR013760 InterPro:IPR018522 Pfam:PF00204 Pfam:PF00986
Pfam:PF02518 PRINTS:PR00418 PROSITE:PS00177 SMART:SM00387
SMART:SM00433 Pfam:PF01751 InterPro:IPR006171 GO:GO:0005524
GO:GO:0005737 GO:GO:0005694 EMBL:AE003852 GenomeReviews:AE003852_GR
Gene3D:3.30.565.10 SUPFAM:SSF55874 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0009330
GO:GO:0006265 GO:GO:0003918 SUPFAM:SSF56719 eggNOG:COG0187
KO:K02470 Gene3D:3.40.50.670 TIGRFAMs:TIGR01059 PROSITE:PS50880
OMA:IFETTEF ProtClustDB:PRK14939 PIR:H82376 RefSeq:NP_062599.1
ProteinModelPortal:Q9KVX3 SMR:Q9KVX3 PRIDE:Q9KVX3 DNASU:2615137
GeneID:2615137 KEGG:vch:VC0015 PATRIC:20079078 Uniprot:Q9KVX3
Length = 805
Score = 1119 (399.0 bits), Expect = 1.8e-131, Sum P(2) = 1.8e-131
Identities = 231/542 (42%), Positives = 329/542 (60%)
Query: 1 MYIGSTGP-RGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHP 59
MYIG T GLHH+V+E++DN++DEA AGY +I V + DNSVSV+D+GRGIP ++HP
Sbjct: 25 MYIGDTDDGTGLHHMVFEVVDNSIDEALAGYCKDIVVTIHEDNSVSVSDDGRGIPTEMHP 84
Query: 60 ATNKSALETVLTVLHAXXXXXXXXXXXXXXXXXXXXXXXXXNALSESLEVTVWRDGMEYH 119
SA E ++TVLHA NALSE + +T++R G +
Sbjct: 85 EEKVSAAEVIMTVLHAGGKFDDNSYKVSGGLHGVGVSVV--NALSEKVLLTIYRGGKIHS 142
Query: 120 QKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLN 179
Q Y G P L V +R GT +RFWP Q FT I+F ++ +A R+REL+FLN
Sbjct: 143 QTYHHGVPQAPLAV----VGETERTGTTVRFWPSAQTFTN-IEFHYDILAKRLRELSFLN 197
Query: 180 PKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKD-VDGITID 237
++I L E + +K+ + + GG++ +V LN +K P+H+ V F ++ DGI+++
Sbjct: 198 SGVSIKLTDEREEDKKDHF---MYEGGIQAFVTHLNRNKTPIHEKVFHFNQEREDGISVE 254
Query: 238 LALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSG 297
+A+QW +D + + + + N+I DGGTH+ G + +LTRTLN+ K K + SG
Sbjct: 255 VAMQW-NDGFQENIYCFTNNIPQRDGGTHLAGFRGALTRTLNNYMDKEGFSKKAQAATSG 313
Query: 298 EHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVXXXXX 357
+ REGLT ++SV+VP+P+F QTK +L + EV+ V+ ++ E L ++L +P
Sbjct: 314 DDAREGLTAVVSVKVPDPKFSSQTKDKLVSSEVKSAVESAMNEKLADFLAENPSEAKNVC 373
Query: 358 XXXXXXXXXXXXXXXXXXXVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSA 417
R+K L + LPGKLADC P SE++IVEGDSAGGSA
Sbjct: 374 SKIIDAARAREAARKAREMTRRKGALDLAGLPGKLADCQEKDPALSELYIVEGDSAGGSA 433
Query: 418 KQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHK 477
KQGR+R+ QAILPL+GKILNVE+ M ++E+ LI ALG G+ +++ + LRYH
Sbjct: 434 KQGRNRKNQAILPLKGKILNVEKARFDKMLSSQEVATLITALGCGIGRDEYNPDKLRYHN 493
Query: 478 IIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAEL 537
III+TDADVDG+HIRTLLLTFFYR L + G IY+ PPLYKV++GKQ QY D+ +
Sbjct: 494 IIIMTDADVDGSHIRTLLLTFFYRQMPELIERGYIYIAQPPLYKVKKGKQEQYIKDEEAM 553
Query: 538 KK 539
+
Sbjct: 554 NQ 555
Score = 191 (72.3 bits), Expect = 1.8e-131, Sum P(2) = 1.8e-131
Identities = 38/69 (55%), Positives = 52/69 (75%)
Query: 551 SIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQ- 609
SIQR+KGLGEM P QLWETT++PE R + Q+ IEDA A+ +F++LMG +V+ R+ I+
Sbjct: 736 SIQRYKGLGEMNPDQLWETTMDPETRRMMQVTIEDAVGADELFTTLMGDQVEPRRAFIET 795
Query: 610 NAANLVNLD 618
NA + NLD
Sbjct: 796 NALKVANLD 804
>UNIPROTKB|P0AES6 [details] [associations]
symbol:gyrB species:83333 "Escherichia coli K-12"
[GO:0008094 "DNA-dependent ATPase activity" evidence=IDA]
[GO:0003677 "DNA binding" evidence=IDA;IMP] [GO:0009330 "DNA
topoisomerase complex (ATP-hydrolyzing)" evidence=IDA] [GO:0006265
"DNA topological change" evidence=IEA;IMP] [GO:0005524 "ATP
binding" evidence=IEA;IDA] [GO:0042493 "response to drug"
evidence=IDA] [GO:0003918 "DNA topoisomerase type II
(ATP-hydrolyzing) activity" evidence=IEA;IDA] [GO:0006351
"transcription, DNA-dependent" evidence=IMP] [GO:0005737
"cytoplasm" evidence=IEA;IDA] [GO:0005694 "chromosome"
evidence=IEA] [GO:0009295 "nucleoid" evidence=IBA] [GO:0007059
"chromosome segregation" evidence=IBA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0046677 "response to antibiotic"
evidence=IEA] HAMAP:MF_01898 InterPro:IPR001241 InterPro:IPR002288
InterPro:IPR003594 InterPro:IPR011557 InterPro:IPR013506
InterPro:IPR013759 InterPro:IPR013760 InterPro:IPR018522
Pfam:PF00204 Pfam:PF00986 Pfam:PF02518 PRINTS:PR00418
PROSITE:PS00177 SMART:SM00387 SMART:SM00433 Pfam:PF01751
InterPro:IPR006171 GO:GO:0005524 GO:GO:0005737 GO:GO:0005694
GO:GO:0007059 GO:GO:0042493 EMBL:U00096 EMBL:AP009048
GenomeReviews:AP009048_GR GenomeReviews:U00096_GR GO:GO:0046677
GO:GO:0006351 EMBL:L10328 Gene3D:3.30.565.10 SUPFAM:SSF55874
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 GO:GO:0009330 GO:GO:0009295 EMBL:X04341
GO:GO:0006265 GO:GO:0003918 SUPFAM:SSF56719 PDB:3NUH PDBsum:3NUH
eggNOG:COG0187 HOGENOM:HOG000075155 KO:K02470 Gene3D:3.40.50.670
TIGRFAMs:TIGR01059 PROSITE:PS50880 OMA:IFETTEF ProtClustDB:PRK14939
EMBL:D87842 EMBL:M15548 PIR:D65172 RefSeq:YP_026241.1
RefSeq:YP_491736.1 PDB:1AJ6 PDB:1EI1 PDB:1KZN PDB:3G7E PDB:4DUH
PDBsum:1AJ6 PDBsum:1EI1 PDBsum:1KZN PDBsum:3G7E PDBsum:4DUH
ProteinModelPortal:P0AES6 SMR:P0AES6 DIP:DIP-48005N IntAct:P0AES6
PaxDb:P0AES6 PRIDE:P0AES6 EnsemblBacteria:EBESCT00000002623
EnsemblBacteria:EBESCT00000017095 GeneID:12930543 GeneID:948211
KEGG:ecj:Y75_p3474 KEGG:eco:b3699 PATRIC:32122895 EchoBASE:EB0419
EcoGene:EG10424 BioCyc:EcoCyc:EG10424-MONOMER
BioCyc:ECOL316407:JW5625-MONOMER BioCyc:MetaCyc:EG10424-MONOMER
BindingDB:P0AES6 ChEMBL:CHEMBL1826 DrugBank:DB00817
EvolutionaryTrace:P0AES6 Genevestigator:P0AES6 Uniprot:P0AES6
Length = 804
Score = 1122 (400.0 bits), Expect = 1.6e-130, Sum P(2) = 1.6e-130
Identities = 229/545 (42%), Positives = 327/545 (60%)
Query: 1 MYIGSTGP-RGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHP 59
MYIG T GLHH+V+E++DNA+DEA AG+ I V + ADNSVSV D+GRGIP +HP
Sbjct: 25 MYIGDTDDGTGLHHMVFEVVDNAIDEALAGHCKEIIVTIHADNSVSVQDDGRGIPTGIHP 84
Query: 60 ATNKSALETVLTVLHAXXXXXXXXXXXXXXXXXXXXXXXXXNALSESLEVTVWRDGMEYH 119
SA E ++TVLHA NALS+ LE+ + R+G +
Sbjct: 85 EEGVSAAEVIMTVLHAGGKFDDNSYKVSGGLHGVGVSVV--NALSQKLELVIQREGKIHR 142
Query: 120 QKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLN 179
Q Y G P L ++ GT +RFWP + FT +F++ +A R+REL+FLN
Sbjct: 143 QIYEHGVPQAPLAV----TGETEKTGTMVRFWPSLETFTNVTEFEYEILAKRLRELSFLN 198
Query: 180 PKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDL 238
++I LR D + + + + GG++ +V++LN +K P+H ++ F + DGI +++
Sbjct: 199 SGVSIRLR----DKRDGKEDHFHYEGGIKAFVEYLNKNKTPIHPNIFYFSTEKDGIGVEV 254
Query: 239 ALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGE 298
ALQW +D + + + + N+I DGGTH+ G +A++TRTLN+ K K +S +G+
Sbjct: 255 ALQW-NDGFQENIYCFTNNIPQRDGGTHLAGFRAAMTRTLNAYMDKEGYSKKAKVSATGD 313
Query: 299 HVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVXXXXXX 358
REGL ++SV+VP+P+F QTK +L + EV+ V+Q + E L EYL +P
Sbjct: 314 DAREGLIAVVSVKVPDPKFSSQTKDKLVSSEVKSAVEQQMNELLAEYLLENPTDAKIVVG 373
Query: 359 XXXXXXXXXXXXXXXXXXVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAK 418
R+K L + LPGKLADC P SE+++VEGDSAGGSAK
Sbjct: 374 KIIDAARAREAARRAREMTRRKGALDLAGLPGKLADCQERDPALSELYLVEGDSAGGSAK 433
Query: 419 QGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKI 478
QGR+R+ QAILPL+GKILNVE+ M ++E+ LI ALG G+ +++ + LRYH I
Sbjct: 434 QGRNRKNQAILPLKGKILNVEKARFDKMLSSQEVATLITALGCGIGRDEYNPDKLRYHSI 493
Query: 479 IILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELK 538
II+TDADVDG+HIRTLLLTFFYR + + G +Y+ PPLYKV++GKQ QY DD +
Sbjct: 494 IIMTDADVDGSHIRTLLLTFFYRQMPEIVERGHVYIAQPPLYKVKKGKQEQYIKDDEAMD 553
Query: 539 KVKSS 543
+ + S
Sbjct: 554 QYQIS 558
Score = 179 (68.1 bits), Expect = 1.6e-130, Sum P(2) = 1.6e-130
Identities = 43/100 (43%), Positives = 64/100 (64%)
Query: 522 VERGKQVQ--YCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLK 579
+ERG++ Q ++ A VK S L SIQR+KGLGEM P QLWETT++PE R +
Sbjct: 707 IERGERRQPVASFEQALDWLVKES--RRGL-SIQRYKGLGEMNPEQLWETTMDPESRRML 763
Query: 580 QLVIEDAAEANVVFSSLMGARVDTRKELIQ-NAANLVNLD 618
++ ++DA A+ +F++LMG V+ R+ I+ NA N+D
Sbjct: 764 RVTVKDAIAADQLFTTLMGDAVEPRRAFIEENALKAANID 803
>TIGR_CMR|SPO_0155 [details] [associations]
symbol:SPO_0155 "DNA gyrase, B subunit" species:246200
"Ruegeria pomeroyi DSS-3" [GO:0003916 "DNA topoisomerase activity"
evidence=ISS] [GO:0003918 "DNA topoisomerase type II
(ATP-hydrolyzing) activity" evidence=ISS] [GO:0006265 "DNA
topological change" evidence=ISS] [GO:0009330 "DNA topoisomerase
complex (ATP-hydrolyzing)" evidence=ISS] HAMAP:MF_01898
InterPro:IPR001241 InterPro:IPR002288 InterPro:IPR003594
InterPro:IPR011557 InterPro:IPR013506 InterPro:IPR013759
InterPro:IPR013760 InterPro:IPR018522 Pfam:PF00204 Pfam:PF00986
Pfam:PF02518 PRINTS:PR00418 PROSITE:PS00177 SMART:SM00387
SMART:SM00433 Pfam:PF01751 InterPro:IPR006171 GO:GO:0005524
GO:GO:0005737 GO:GO:0005694 EMBL:CP000031 GenomeReviews:CP000031_GR
GO:GO:0006261 Gene3D:3.30.565.10 SUPFAM:SSF55874 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0006265
GO:GO:0003918 SUPFAM:SSF56719 HOGENOM:HOG000075155 KO:K02470
Gene3D:3.40.50.670 TIGRFAMs:TIGR01059 OMA:IFETTEF
ProtClustDB:PRK14939 RefSeq:YP_165427.1 ProteinModelPortal:Q5LWU8
SMR:Q5LWU8 GeneID:3194940 KEGG:sil:SPO0155 PATRIC:23373557
Uniprot:Q5LWU8
Length = 805
Score = 1114 (397.2 bits), Expect = 2.0e-130, Sum P(2) = 2.0e-130
Identities = 235/539 (43%), Positives = 326/539 (60%)
Query: 1 MYIGSTGP-RGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHP 59
MYIG T GLHH+VYE++DN +DEA AG+A ++ V + AD+SVSVADNGRGIP+D+H
Sbjct: 31 MYIGDTDDGSGLHHMVYEVVDNGIDEALAGHADHVTVKIHADSSVSVADNGRGIPVDIHA 90
Query: 60 ATNKSALETVLTVLHAXXXXXXXXXXXXXXXXXXXXXXXXXNALSESLEVTVWRDGMEYH 119
SA E ++T LHA NALS+ LE+ +WR G E+
Sbjct: 91 EEGVSAAEVIMTQLHAGGKFDSNSYKVSGGLHGVGVSVV--NALSDWLELRIWRHGKEHV 148
Query: 120 QKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLN 179
++ RG V L V+ + DR GT +RF F+ + + T+ R+RELAFLN
Sbjct: 149 ARFERGDTVEHL--RVVG-ECGDRTGTEVRFLASTTTFSN-LDYVFETLEKRLRELAFLN 204
Query: 180 PKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDV-VGFRKDVDGITIDL 238
+ I L D P + E F+ GG+ E+V++L+ K P+ + F+ + D I +++
Sbjct: 205 SGVRIILI--DERPAERIETELFYEGGVREFVKYLDRSKSPVMPAPIYFKGERDDIGVEI 262
Query: 239 ALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGE 298
A+ W +D+Y +T+L + N+I DGGTH+ G + +LTRT+N+ + S K + I+ +G+
Sbjct: 263 AMWW-NDSYHETVLPFTNNIPQRDGGTHVAGFRGALTRTINNYAQSSGIAKREKINFTGD 321
Query: 299 HVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVXXXXXX 358
REGLTC++SV+VP+P+F QTK +L + EVR V+ V E L E+ E +P+V
Sbjct: 322 DAREGLTCVLSVKVPDPKFSSQTKDKLVSSEVRPAVENLVNEKLAEWFEENPNVAKQIVG 381
Query: 359 XXXXXXXXXXXXXXXXXXVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAK 418
R+K+ + + L GKL DCS P ++E+F+VEGDSAGGSA+
Sbjct: 382 KIIEAALAREAARKARELTRRKTAMDVNYLAGKLKDCSEKDPSKTEVFLVEGDSAGGSAQ 441
Query: 419 QGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKI 478
GRDRR QA+LPLRGKILNVER M ++EI NL+ ALG G+ ++F LRYHKI
Sbjct: 442 TGRDRRTQAVLPLRGKILNVERARFDRMLGSQEIGNLVMALGTGIGRDEFNISKLRYHKI 501
Query: 479 IILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAEL 537
+I+TDADVDGAHIRTLLLTFFYR L + G +Y+ PPLYKV RGK Y D A L
Sbjct: 502 VIMTDADVDGAHIRTLLLTFFYRQMPELIEGGYLYIAQPPLYKVARGKSEVYLKDQAAL 560
Score = 186 (70.5 bits), Expect = 2.0e-130, Sum P(2) = 2.0e-130
Identities = 37/69 (53%), Positives = 51/69 (73%)
Query: 551 SIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQ- 609
++QR+KGLGEM P QLWETTL+P+ R L Q+ + D EA+ +F+ LMG V+ R+E IQ
Sbjct: 736 TLQRYKGLGEMNPEQLWETTLDPDARTLLQVRVNDMVEADDIFTKLMGDSVEPRREFIQQ 795
Query: 610 NAANLVNLD 618
NA ++ NLD
Sbjct: 796 NALSVENLD 804
>TIGR_CMR|SO_0011 [details] [associations]
symbol:SO_0011 "DNA gyrase, B subunit" species:211586
"Shewanella oneidensis MR-1" [GO:0003918 "DNA topoisomerase type II
(ATP-hydrolyzing) activity" evidence=ISS] [GO:0006260 "DNA
replication" evidence=ISS] [GO:0009330 "DNA topoisomerase complex
(ATP-hydrolyzing)" evidence=ISS] HAMAP:MF_01898 InterPro:IPR001241
InterPro:IPR002288 InterPro:IPR003594 InterPro:IPR011557
InterPro:IPR013506 InterPro:IPR013759 InterPro:IPR013760
InterPro:IPR018522 Pfam:PF00204 Pfam:PF00986 Pfam:PF02518
PRINTS:PR00418 PROSITE:PS00177 SMART:SM00387 SMART:SM00433
Pfam:PF01751 InterPro:IPR006171 GO:GO:0005524 GO:GO:0005737
GO:GO:0005694 GO:GO:0006261 EMBL:AE014299 GenomeReviews:AE014299_GR
Gene3D:3.30.565.10 SUPFAM:SSF55874 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0006265
GO:GO:0003918 SUPFAM:SSF56719 HOGENOM:HOG000075155 KO:K02470
Gene3D:3.40.50.670 TIGRFAMs:TIGR01059 OMA:IFETTEF
ProtClustDB:PRK14939 HSSP:P06982 RefSeq:NP_715653.1
ProteinModelPortal:Q8EKS9 SMR:Q8EKS9 GeneID:1167909
KEGG:son:SO_0011 PATRIC:23519713 Uniprot:Q8EKS9
Length = 805
Score = 1082 (385.9 bits), Expect = 2.3e-129, Sum P(2) = 2.3e-129
Identities = 230/566 (40%), Positives = 335/566 (59%)
Query: 1 MYIGSTGP-RGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHP 59
MYIG T GLHH+V+E++DN++DEA AG+ ++I + + D SVSV D+GRGIP+ +H
Sbjct: 26 MYIGDTDDGTGLHHMVFEVVDNSIDEALAGHCTDITITIHVDGSVSVKDDGRGIPVSIHE 85
Query: 60 ATNKSALETVLTVLHAXXXXXXXXXXXXXXXXXXXXXXXXXNALSESLEVTVWRDGMEYH 119
SA E ++TVLHA NALS+ L++T+ RDG +
Sbjct: 86 EEGVSAAEVIMTVLHAGGKFDDNSYKVSGGLHGVGVSVV--NALSKKLQLTIRRDGKVHE 143
Query: 120 QKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLN 179
Q Y+ G P + + + GT IRFWP +Q F+ ++F +A R+REL+FLN
Sbjct: 144 QFYTHGVP----DAPIKEIGDATKTGTEIRFWPSEQTFSN-VEFHFEILAKRVRELSFLN 198
Query: 180 PKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVD-GITID 237
+ +R D KN++ +Y GG+ +V +LN +K P++ DV F ++ D GIT++
Sbjct: 199 SG--VGIRLVDERDNKNEFFKY--EGGISAFVDYLNRNKTPVNKDVFHFMQERDDGITVE 254
Query: 238 LALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSG 297
+A+QW +D Y + + + N+I DGGTH+ G +++LTR LN+ + K + +G
Sbjct: 255 VAMQW-NDGYQENIFCFTNNIPQRDGGTHLAGFRSALTRNLNNYMENEGYNKKGKTNATG 313
Query: 298 EHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVXXXXX 357
+ REGLT +ISV+VP+P+F QTK +L + EV+ V+Q++ E L +YL +P
Sbjct: 314 DDAREGLTAVISVKVPDPKFSSQTKDKLVSSEVKAAVEQTMGEKLNDYLLENPADAKLIV 373
Query: 358 XXXXXXXXXXXXXXXXXXXVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSA 417
R+K L LPGKLADC P SEI+IVEGDSAGGSA
Sbjct: 374 GKIVDAARAREAARKAREMTRRKGALDLGGLPGKLADCQEKDPGLSEIYIVEGDSAGGSA 433
Query: 418 KQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHK 477
KQGR+R+ QAILPL+GKILNVE+ M ++E+ LI ALG G+ +++ + RYH
Sbjct: 434 KQGRNRKNQAILPLKGKILNVEKARFDKMLSSQEVATLITALGCGIGRDEYNPDKTRYHN 493
Query: 478 IIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAEL 537
III+TDADVDG+HIRTLLLTFF+R L + G +Y+ PPL+KV++GKQ QY D++ L
Sbjct: 494 IIIMTDADVDGSHIRTLLLTFFFRQMPELIERGYVYIAQPPLFKVKKGKQEQYLKDESAL 553
Query: 538 KK--VKSSFPSNALYSIQRFKGL-GE 560
+ + ++Y Q G+ GE
Sbjct: 554 TQYLTTQALDGTSIYPSQGAPGMSGE 579
Score = 208 (78.3 bits), Expect = 2.3e-129, Sum P(2) = 2.3e-129
Identities = 52/111 (46%), Positives = 69/111 (62%)
Query: 509 EGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWE 568
EG I VG Y V+RG +V+ E S LY IQR+KGLGEM P QLWE
Sbjct: 699 EGLIEVGG---Y-VQRGDRVKEVGSFIEALDWTISEAKRGLY-IQRYKGLGEMNPEQLWE 753
Query: 569 TTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQ-NAANLVNLD 618
TT++PE R + Q+ I+DA A+ +F+ LMG +V+ R+E I+ NA N+ NLD
Sbjct: 754 TTMDPESRRMLQVTIDDAVGADQLFTCLMGDQVEPRREFIEANALNVANLD 804
>TIGR_CMR|CBU_0004 [details] [associations]
symbol:CBU_0004 "DNA gyrase, B subunit" species:227377
"Coxiella burnetii RSA 493" [GO:0003918 "DNA topoisomerase type II
(ATP-hydrolyzing) activity" evidence=ISS] [GO:0006260 "DNA
replication" evidence=ISS] [GO:0009330 "DNA topoisomerase complex
(ATP-hydrolyzing)" evidence=ISS] HAMAP:MF_01898 InterPro:IPR001241
InterPro:IPR002288 InterPro:IPR003594 InterPro:IPR011557
InterPro:IPR013506 InterPro:IPR013759 InterPro:IPR013760
InterPro:IPR018522 Pfam:PF00204 Pfam:PF00986 Pfam:PF02518
PRINTS:PR00418 PROSITE:PS00177 SMART:SM00387 SMART:SM00433
Pfam:PF01751 InterPro:IPR006171 GO:GO:0005524 GO:GO:0005737
GO:GO:0005694 GO:GO:0006261 EMBL:AE016828 GenomeReviews:AE016828_GR
Gene3D:3.30.565.10 SUPFAM:SSF55874 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0006265
GO:GO:0003918 SUPFAM:SSF56719 HOGENOM:HOG000075155 KO:K02470
Gene3D:3.40.50.670 TIGRFAMs:TIGR01059 OMA:IFETTEF
ProtClustDB:PRK14939 RefSeq:NP_819060.2 ProteinModelPortal:Q83FD5
PRIDE:Q83FD5 GeneID:1207924 KEGG:cbu:CBU_0004 PATRIC:17928685
BioCyc:CBUR227377:GJ7S-5-MONOMER Uniprot:Q83FD5
Length = 810
Score = 1113 (396.9 bits), Expect = 6.2e-129, Sum P(2) = 6.2e-129
Identities = 234/539 (43%), Positives = 326/539 (60%)
Query: 1 MYIGSTGP-RGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHP 59
MYIG T GLHH+V+E++DN++DEA AG+ S+I V + AD SVSV DNGRGIP D+HP
Sbjct: 31 MYIGDTDDGSGLHHMVFEVVDNSIDEALAGFCSHIWVTIHADGSVSVRDNGRGIPTDIHP 90
Query: 60 ATNKSALETVLTVLHAXXXXXXXXXXXXXXXXXXXXXXXXXNALSESLEVTVWRDGMEYH 119
+SA E ++TVLHA NALSE L +T+ ++G Y
Sbjct: 91 EEGRSAAEVIMTVLHAGGKFDKNAYKVSGGLHGVGISVV--NALSEELYMTIRQNGNVYT 148
Query: 120 QKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLN 179
Q Y G P L D+ GT IRF P +F+ +F ++ +A R+RELAFLN
Sbjct: 149 QTYKMGVPQAPLAV----TGKSDKTGTEIRFKPSNAIFSNT-EFHYDILAKRLRELAFLN 203
Query: 180 PKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDL 238
+ +R E +D + + + + GG++ +V+ LN K P+H DV F + + I +++
Sbjct: 204 ----LGVRIELTDERSGRGDIFEYEGGIKAFVEHLNKKKTPIHSDVFHFSTEKNDIVVEV 259
Query: 239 ALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGE 298
A+QW +D + +T+ + N+I DGGTH+ G +A+LTRTLN+ + K +++SG+
Sbjct: 260 AMQW-NDGFQETIFCFTNNIPQNDGGTHLAGFRAALTRTLNNYIEGEALAKKSKVTISGD 318
Query: 299 HVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVXXXXXX 358
REGLT ++SV+VP+P+F QTK +L + EV+ VV+ +V + L +YL +P
Sbjct: 319 DTREGLTVVLSVKVPDPKFSSQTKDKLVSSEVKPVVESTVAKQLHDYLLENPKQARIIAM 378
Query: 359 XXXXXXXXXXXXXXXXXXVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAK 418
R+K+VL LPGKLADC P E+F+VEGDSAGGSAK
Sbjct: 379 KVIDAARAREAARKARDMTRRKNVLDLGGLPGKLADCQEKDPALCELFLVEGDSAGGSAK 438
Query: 419 QGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKI 478
Q RDRR+QAILPL+GKILNVE+ M + E+ LI ALG G+ E++ + LRYH+I
Sbjct: 439 QARDRRYQAILPLKGKILNVEKARFDKMLSSAEVGTLITALGCGIGKEEYNPDKLRYHRI 498
Query: 479 IILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAEL 537
I++TDADVDG+HIRTLLLTFFYR L + G IY+ PPLYKV++ KQ QY DD L
Sbjct: 499 ILMTDADVDGSHIRTLLLTFFYRQMPELIERGHIYIAQPPLYKVKKSKQEQYVKDDLAL 557
Score = 173 (66.0 bits), Expect = 6.2e-129, Sum P(2) = 6.2e-129
Identities = 37/69 (53%), Positives = 50/69 (72%)
Query: 551 SIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELI-Q 609
+IQR+KGLGEM P QLWETT++ E R L + IEDA A+ +F++LMG +V+ R+ I Q
Sbjct: 741 NIQRYKGLGEMNPDQLWETTMDRESRRLLSVSIEDAVMADEIFTTLMGDQVEPRRLFIEQ 800
Query: 610 NAANLVNLD 618
NA + NLD
Sbjct: 801 NALAVENLD 809
>UNIPROTKB|P0C5C5 [details] [associations]
symbol:gyrB "DNA gyrase subunit B" species:1773
"Mycobacterium tuberculosis" [GO:0000287 "magnesium ion binding"
evidence=IDA] [GO:0003918 "DNA topoisomerase type II
(ATP-hydrolyzing) activity" evidence=IDA] [GO:0005524 "ATP binding"
evidence=IDA] [GO:0005618 "cell wall" evidence=IDA] [GO:0005886
"plasma membrane" evidence=IDA] [GO:0040007 "growth" evidence=IMP]
[GO:0046982 "protein heterodimerization activity" evidence=IPI]
HAMAP:MF_01898 InterPro:IPR001241 InterPro:IPR002288
InterPro:IPR003594 InterPro:IPR011557 InterPro:IPR013506
InterPro:IPR013759 InterPro:IPR013760 InterPro:IPR018522
Pfam:PF00204 Pfam:PF00986 Pfam:PF02518 PRINTS:PR00418
PROSITE:PS00177 SMART:SM00387 SMART:SM00433 Pfam:PF01751
InterPro:IPR006171 GO:GO:0005886 GO:GO:0005524 GO:GO:0005737
GO:GO:0040007 GO:GO:0005618 GO:GO:0005694 EMBL:AE000516
GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR GO:GO:0000287
EMBL:BX842572 Gene3D:3.30.565.10 SUPFAM:SSF55874 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0006265
GO:GO:0003918 SUPFAM:SSF56719 EMBL:L27512 eggNOG:COG0187 KO:K02470
Gene3D:3.40.50.670 TIGRFAMs:TIGR01059 PROSITE:PS50880 OMA:IFETTEF
ProtClustDB:PRK05644 PIR:S44198 RefSeq:NP_214519.1
RefSeq:NP_334414.1 RefSeq:YP_006513317.1 PDB:2ZJT PDB:3IG0 PDB:3M4I
PDBsum:2ZJT PDBsum:3IG0 PDBsum:3M4I ProteinModelPortal:P0C5C5
SMR:P0C5C5 PRIDE:P0C5C5 EnsemblBacteria:EBMYCT00000001058
EnsemblBacteria:EBMYCT00000070955 GeneID:13315978 GeneID:887081
GeneID:922435 KEGG:mtc:MT0005 KEGG:mtu:Rv0005 KEGG:mtv:RVBD_0005
PATRIC:18121734 TubercuList:Rv0005 HOGENOM:HOG000075154
BindingDB:P0C5C5 ChEMBL:CHEMBL3489 EvolutionaryTrace:P0C5C5
Uniprot:P0C5C5
Length = 675
Score = 910 (325.4 bits), Expect = 1.9e-127, Sum P(2) = 1.9e-127
Identities = 192/447 (42%), Positives = 274/447 (61%)
Query: 180 PKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDL 238
PK E + P K + + + GGL ++V+ +N K +H +V F G +++
Sbjct: 230 PKSASERAAESTAPHKVKSRTFHYPGGLVDFVKHINRTKNAIHSSIVDFSGKGTGHEVEI 289
Query: 239 ALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGE 298
A+QW + YS+++ +AN+I T +GGTH EG +++LT +N K K +KDKD +L+G+
Sbjct: 290 AMQW-NAGYSESVHTFANTINTHEGGTHEEGFRSALTSVVNKYAKDRKLLKDKDPNLTGD 348
Query: 299 HVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVXXXXXX 358
+REGL +ISV+V P+FEGQTKT+LGN EV+ V + E LT + E +P
Sbjct: 349 DIREGLAAVISVKVSEPQFEGQTKTKLGNTEVKSFVQKVCNEQLTHWFEANPTDAKVVVN 408
Query: 359 XXXXXXXXXXXXXXXXXXVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAK 418
VR+KS LPGKLADC ST P +SE+++VEGDSAGGSAK
Sbjct: 409 KAVSSAQARIAARKARELVRRKSATDIGGLPGKLADCRSTDPRKSELYVVEGDSAGGSAK 468
Query: 419 QGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKI 478
GRD FQAILPLRGKI+NVE+ + KN E+Q +I ALG G+ E F LRYHKI
Sbjct: 469 SGRDSMFQAILPLRGKIINVEKARIDRVLKNTEVQAIITALGTGIHDE-FDIGKLRYHKI 527
Query: 479 IILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVE-RGKQVQYCYDDAE- 536
+++ DADVDG HI TLLLT +R+ + L + G +++ PPLYK++ + ++ Y D E
Sbjct: 528 VLMADADVDGQHISTLLLTLLFRFMRPLIENGHVFLAQPPLYKLKWQRSDPEFAYSDRER 587
Query: 537 ---LKK-VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVV 592
L+ +K+ N IQR+KGLGEM +LWETT++P R+L+Q+ ++DAA A+ +
Sbjct: 588 DGLLEAGLKAGKKINKEDGIQRYKGLGEMDAKELWETTMDPSVRVLRQVTLDDAAAADEL 647
Query: 593 FSSLMGARVDTRKELI-QNAANLVNLD 618
FS LMG VD R+ I +NA ++ LD
Sbjct: 648 FSILMGEDVDARRSFITRNAKDVRFLD 674
Score = 362 (132.5 bits), Expect = 1.9e-127, Sum P(2) = 1.9e-127
Identities = 82/189 (43%), Positives = 109/189 (57%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGSTG RGLHHL++E++DNAVDEA AGYA+ + V LL D V VAD+GRGIP+ H A
Sbjct: 32 MYIGSTGERGLHHLIWEVVDNAVDEAMAGYATTVNVVLLEDGGVEVADDGRGIPVATH-A 90
Query: 61 TNKSALETVLTVLHAXXXXXXXXXXXXXXXXXXXXXXXXXNALSESLEVTVWRDGMEYHQ 120
+ ++ V+T LHA NALS LEV + RDG E+ Q
Sbjct: 91 SGIPTVDVVMTQLHAGGKFDSDAYAISGGLHGVGVSVV--NALSTRLEVEIKRDGYEWSQ 148
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
Y + +P+ +K + G+ +RFW D VF T ++D T+A R++E+AFLN
Sbjct: 149 VYEKSEPLGLKQ----GAPTK-KTGSTVRFWADPAVFETT-EYDFETVARRLQEMAFLNK 202
Query: 181 KLTIALRKE 189
LTI L E
Sbjct: 203 GLTINLTDE 211
>UNIPROTKB|Q89W70 [details] [associations]
symbol:gyrB "DNA gyrase subunit B" species:224911
"Bradyrhizobium japonicum USDA 110" [GO:0003918 "DNA topoisomerase
type II (ATP-hydrolyzing) activity" evidence=IBA] [GO:0006261
"DNA-dependent DNA replication" evidence=IBA] [GO:0006265 "DNA
topological change" evidence=IBA] [GO:0007059 "chromosome
segregation" evidence=IBA] [GO:0009295 "nucleoid" evidence=IBA]
HAMAP:MF_01898 InterPro:IPR001241 InterPro:IPR002288
InterPro:IPR003594 InterPro:IPR011557 InterPro:IPR013506
InterPro:IPR013759 InterPro:IPR013760 InterPro:IPR018522
Pfam:PF00204 Pfam:PF00986 Pfam:PF02518 PRINTS:PR00418
PROSITE:PS00177 SMART:SM00387 SMART:SM00433 Pfam:PF01751
InterPro:IPR006171 GO:GO:0005524 GO:GO:0005737 GO:GO:0005694
GO:GO:0007059 GO:GO:0006261 Gene3D:3.30.565.10 SUPFAM:SSF55874
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 GO:GO:0009295 GO:GO:0006265 EMBL:BA000040
GenomeReviews:BA000040_GR GO:GO:0003918 SUPFAM:SSF56719
HOGENOM:HOG000075155 KO:K02470 Gene3D:3.40.50.670
TIGRFAMs:TIGR01059 OMA:IFETTEF ProtClustDB:PRK14939 HSSP:P06982
RefSeq:NP_767463.1 ProteinModelPortal:Q89W70 SMR:Q89W70
GeneID:1047796 KEGG:bja:bll0823 PATRIC:21185152
BioCyc:BJAP224911:GJEJ-831-MONOMER Uniprot:Q89W70
Length = 811
Score = 1115 (397.6 bits), Expect = 3.8e-127, Sum P(2) = 3.8e-127
Identities = 242/540 (44%), Positives = 327/540 (60%)
Query: 1 MYIGSTGP-RGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHP 59
MYIG T GLHH+VYE++DNA+DEA AG+A+ ++V L ADNSV+V D+GRGIP+D+H
Sbjct: 40 MYIGDTDDGSGLHHMVYEVVDNAIDEALAGHATRVDVVLNADNSVTVRDDGRGIPVDIHK 99
Query: 60 ATNKSALETVLTVLHAXXXXXXXXXXXXXXXXXXXXXXXXXNALSESLEVTVWRDGMEYH 119
SA E ++T LHA NALS L + +WRD E++
Sbjct: 100 GEGISAAEVIMTQLHAGGKFDQNSYKVSGGLHGVGVSVV--NALSSKLGLRIWRDNKEHY 157
Query: 120 QKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLN 179
+++ G V L V+ D+ ++GT + F F I++D T+ R+RELAFLN
Sbjct: 158 IEFAHGDAVAPL---VVVGDAPGKRGTEVTFLASPDTFKN-IEYDFATLEHRLRELAFLN 213
Query: 180 PKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDV-VGFRKDVDGITIDL 238
+ IAL EK + E ++GG+EE+V++L+ +KK + + R + +GI ++
Sbjct: 214 SGVNIALSDMRHAVEKRE--EMHYSGGVEEFVKYLDRNKKAIVPAPIMVRAEANGIGVEA 271
Query: 239 ALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGE 298
AL W +D+Y + +L + N+I DGGTH+ G + +LTR +N G K + I+L+G+
Sbjct: 272 ALWW-NDSYHENVLCFTNNIPQRDGGTHLAGFRGALTRQVN--GYAEANAKKEKIALTGD 328
Query: 299 HVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVXXXXXX 358
REGLT ++SV+VP+P+F QTK +L + EVR VV+ + E L + E HP
Sbjct: 329 DCREGLTAVLSVKVPDPKFSSQTKDKLVSSEVRPVVENVLNEALQAWFEEHPSEAKMIVG 388
Query: 359 XXXXXXXXXXXXXXXXXXVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAK 418
R KS L SSLPGKLADC P +SE+FIVEGDSAGGSAK
Sbjct: 389 KVIQAAAAREAARKARELTR-KSPLSVSSLPGKLADCQEKDPAKSELFIVEGDSAGGSAK 447
Query: 419 QGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKI 478
QGR+R FQA+LPLRGKILNVER M +E+I LI ALG G+ E F E LRYHKI
Sbjct: 448 QGRNREFQAVLPLRGKILNVERVRPDKMLGSEQIGTLITALGTGISDE-FSIEKLRYHKI 506
Query: 479 IILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELK 538
I++TDADVDGAHIRTLLLTFFYR + + D G +Y+ PPLYKV RGK QY D+ L+
Sbjct: 507 IVMTDADVDGAHIRTLLLTFFYRQMRDIIDGGYLYIAQPPLYKVSRGKSEQYLKDERALE 566
Score = 154 (59.3 bits), Expect = 3.8e-127, Sum P(2) = 3.8e-127
Identities = 30/68 (44%), Positives = 46/68 (67%)
Query: 551 SIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQN 610
++QR+KGLGEM P QLWETTL+ R L Q+ +++ EA+ +F+ LMG V+ R++ IQ
Sbjct: 743 TLQRYKGLGEMNPEQLWETTLDTNARSLLQVKVKEVDEADDIFTKLMGDVVEPRRDFIQE 802
Query: 611 AANLVNLD 618
+ +D
Sbjct: 803 HSLSATID 810
>UNIPROTKB|A6UX65 [details] [associations]
symbol:gyrB "DNA gyrase subunit B" species:381754
"Pseudomonas aeruginosa PA7" [GO:0003918 "DNA topoisomerase type II
(ATP-hydrolyzing) activity" evidence=IBA] [GO:0006261
"DNA-dependent DNA replication" evidence=IBA] [GO:0006265 "DNA
topological change" evidence=IBA] [GO:0007059 "chromosome
segregation" evidence=IBA] [GO:0009295 "nucleoid" evidence=IBA]
HAMAP:MF_01898 InterPro:IPR001241 InterPro:IPR002288
InterPro:IPR003594 InterPro:IPR011557 InterPro:IPR013506
InterPro:IPR013759 InterPro:IPR013760 InterPro:IPR018522
Pfam:PF00204 Pfam:PF00986 Pfam:PF02518 PRINTS:PR00418
PROSITE:PS00177 SMART:SM00387 SMART:SM00433 Pfam:PF01751
InterPro:IPR006171 GO:GO:0005524 GO:GO:0005737 GO:GO:0005694
GO:GO:0007059 GO:GO:0006261 EMBL:CP000744 GenomeReviews:CP000744_GR
Gene3D:3.30.565.10 SUPFAM:SSF55874 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0009295
GO:GO:0006265 GO:GO:0003918 SUPFAM:SSF56719 eggNOG:COG0187
HOGENOM:HOG000075155 KO:K02470 Gene3D:3.40.50.670
TIGRFAMs:TIGR01059 OMA:IFETTEF ProtClustDB:PRK14939
RefSeq:YP_001345400.1 ProteinModelPortal:A6UX65 SMR:A6UX65
STRING:A6UX65 GeneID:5358744 KEGG:pap:PSPA7_0004 PATRIC:19821910
BioCyc:PAER381754:GHMY-79-MONOMER Uniprot:A6UX65
Length = 806
Score = 1086 (387.4 bits), Expect = 4.9e-127, Sum P(2) = 4.9e-127
Identities = 235/564 (41%), Positives = 334/564 (59%)
Query: 1 MYIGSTGP-RGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHP 59
MYIG T GLHH+V+E++DN++DEA AGY S I + + D S++V DNGRGIP+D+H
Sbjct: 27 MYIGDTDDGTGLHHMVFEVVDNSIDEALAGYCSEISITIHTDESITVRDNGRGIPVDIHK 86
Query: 60 ATNKSALETVLTVLHAXXXXXXXXXXXXXXXXXXXXXXXXXNALSESLEVTVWRDGMEYH 119
SA E ++TVLHA NALS L +T+ R +
Sbjct: 87 EEGVSAAEVIMTVLHAGGKFDDNTYKVSGGLHGVGVSVV--NALSHELRLTIRRHNKVWE 144
Query: 120 QKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLN 179
Q Y G P L V D GT + F P + F+ I F + +A RIREL+FLN
Sbjct: 145 QVYHHGVPQFPLR----EVGETDGSGTEVHFKPSPETFSN-IHFSWDILAKRIRELSFLN 199
Query: 180 PKLTIALRKEDSDPEKNQYNEYF-FAGGLEEYVQWLNTDKKPLHDVVGF--RKDVDGITI 236
+ I LR E + E E F + GGL+ +V++LNT+K ++ V F +++ DG+ +
Sbjct: 200 SGVGILLRDERTGKE-----ELFKYEGGLKAFVEYLNTNKSAVNQVFHFNVQREEDGVGV 254
Query: 237 DLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLS 296
++ALQW +D++++ +L + N+I DGGTH+ G +++LTR LN+ + K I+ +
Sbjct: 255 EVALQW-NDSFNENILCFTNNIPQRDGGTHLAGFRSALTRNLNNYIEAEGLAKKFKIATT 313
Query: 297 GEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVXXXX 356
G+ REGLT IISV+VP+P+F QTK +L + EV+ V+Q + +Y ++L +P+
Sbjct: 314 GDDAREGLTAIISVKVPDPKFSSQTKDKLVSSEVKTAVEQEMGKYFADFLLENPNEAKAV 373
Query: 357 XXXXXXXXXXXXXXXXXXXXVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGS 416
R+K L + LPGKLADC P SE++IVEGDSAGGS
Sbjct: 374 VGKMIDAARAREAARKAREMTRRKGALDIAGLPGKLADCQEKDPALSELYIVEGDSAGGS 433
Query: 417 AKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYH 476
AKQGR+RR QAILPL+GKILNVE+ M ++E+ LI ALG G+ E++ + LRYH
Sbjct: 434 AKQGRNRRTQAILPLKGKILNVEKARFDKMLSSQEVGTLITALGCGIGREEYNIDKLRYH 493
Query: 477 KIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAE 536
III+TDADVDG+HIRTLLLTFF+R L + G +Y+ PPLYKV+RGKQ QY DD
Sbjct: 494 NIIIMTDADVDGSHIRTLLLTFFFRQMPELIERGYVYIAQPPLYKVKRGKQEQYIKDDQA 553
Query: 537 LKK--VKSSFPSNALYSIQRFKGL 558
+++ +S+ +L+ + GL
Sbjct: 554 MEEYMTQSALEDASLHVNEHAPGL 577
Score = 182 (69.1 bits), Expect = 4.9e-127, Sum P(2) = 4.9e-127
Identities = 36/70 (51%), Positives = 52/70 (74%)
Query: 550 YSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQ 609
+SIQR+KGLGEM P QLWETT++P R + ++ IEDA A+ +F++LMG V+ R++ I+
Sbjct: 736 HSIQRYKGLGEMNPEQLWETTMDPNVRRMLKVTIEDAIAADQIFNTLMGDAVEPRRDFIE 795
Query: 610 -NAANLVNLD 618
NA + NLD
Sbjct: 796 SNALAVSNLD 805
>TIGR_CMR|BA_3657 [details] [associations]
symbol:BA_3657 "DNA topoisomerase IV, B subunit"
species:198094 "Bacillus anthracis str. Ames" [GO:0003918 "DNA
topoisomerase type II (ATP-hydrolyzing) activity" evidence=ISS]
[GO:0006260 "DNA replication" evidence=ISS] [GO:0006265 "DNA
topological change" evidence=ISS] [GO:0009340 "DNA topoisomerase IV
complex" evidence=ISS] InterPro:IPR001241 InterPro:IPR002288
InterPro:IPR003594 InterPro:IPR005740 InterPro:IPR011557
InterPro:IPR013506 InterPro:IPR013759 InterPro:IPR013760
InterPro:IPR018522 Pfam:PF00204 Pfam:PF00986 Pfam:PF02518
PRINTS:PR00418 PROSITE:PS00177 SMART:SM00387 SMART:SM00433
Pfam:PF01751 InterPro:IPR006171 GO:GO:0005524 GO:GO:0005694
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR
Gene3D:3.30.565.10 SUPFAM:SSF55874 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0006265
GO:GO:0003918 SUPFAM:SSF56719 Gene3D:3.40.50.670 TIGRFAMs:TIGR01059
HOGENOM:HOG000075154 KO:K02622 OMA:TDGTGLH ProtClustDB:PRK05559
TIGRFAMs:TIGR01058 HSSP:P06982 RefSeq:NP_845922.1
RefSeq:YP_020292.2 RefSeq:YP_029649.1 ProteinModelPortal:Q81Y98
IntAct:Q81Y98 DNASU:1085976 EnsemblBacteria:EBBACT00000013021
EnsemblBacteria:EBBACT00000015630 EnsemblBacteria:EBBACT00000022573
GeneID:1085976 GeneID:2818281 GeneID:2850873 KEGG:ban:BA_3657
KEGG:bar:GBAA_3657 KEGG:bat:BAS3392
BioCyc:BANT260799:GJAJ-3454-MONOMER
BioCyc:BANT261594:GJ7F-3563-MONOMER Uniprot:Q81Y98
Length = 654
Score = 1240 (441.6 bits), Expect = 2.9e-126, P = 2.9e-126
Identities = 267/618 (43%), Positives = 369/618 (59%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLVYEI+DN+VDEA AG+ I V + DNS+SV D GRG+P +H
Sbjct: 28 MYIGSTDSRGLHHLVYEIVDNSVDEALAGFGDEISVVIHKDNSISVIDKGRGMPTGMHKL 87
Query: 61 TNKSALETVLTVLHAXXXXXXXXXXXXXXXXXXXXXXXXXNALSESLEVTVWRDGMEYHQ 120
K E +LTVLHA NALSE L VT+ RDG Y Q
Sbjct: 88 -GKPTPEVILTVLHAGGKFGQGGYKTSGGLHGVGASVV--NALSEWLVVTIKRDGNIYEQ 144
Query: 121 KYSRGK-PVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLN 179
++ G PVTTL + GT + F PD +F+T +++ T+ R+RE AFL
Sbjct: 145 RFENGGVPVTTLE----KIGKTKESGTTMHFKPDTTIFSTT-NYNYETLCERLRESAFLL 199
Query: 180 PKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGITIDLA 239
+ I+++ E +D E + + + G+E +V +LN +K +H VV F + +GI +LA
Sbjct: 200 KGMKISIKDERNDLE----DVFHYETGIEAFVSYLNEEKDSIHPVVYFTGEQNGIEAELA 255
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
Q+ +D YS+ +L + N++RT DGGTH G K ++TR N +K +K+KD +L G
Sbjct: 256 FQF-NDGYSENILSFVNNVRTKDGGTHEAGFKTAMTRVFNEYARKVALLKEKDKNLEGTD 314
Query: 300 VREGLTCIISVRVPNP--EFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVXXXXX 357
+REG+ I+SVRVP +FEGQTK +LG E R +D V E+L +LE +PDV
Sbjct: 315 IREGVAAIVSVRVPEEVLQFEGQTKGKLGTSEARSSIDAIVSEHLAYFLEENPDVATLLV 374
Query: 358 XXXXXXXXXXXXXXXXXXXVR--QKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGG 415
R +K +L GKL S P+++E+++VEGDSAGG
Sbjct: 375 RKAIKAAQAREAARKAREEARTGKKKKKSEGTLSGKLTPAQSRNPQKNELYLVEGDSAGG 434
Query: 416 SAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRY 475
SAKQGRDRRFQA+LPLRGK++N E+ A ++KNEEI +I A+G GV G +F E + Y
Sbjct: 435 SAKQGRDRRFQAVLPLRGKVINTEKAKLADIFKNEEINTIIYAIGGGV-GNEFDVEDINY 493
Query: 476 HKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQ----VQYC 531
K++I+TDAD DGAHI+ LLLTFFYRY K L + G +++ +PPLYKV +GK ++Y
Sbjct: 494 DKVVIMTDADTDGAHIQVLLLTFFYRYMKPLIEAGKVFIALPPLYKVSKGKGKSEVIEYA 553
Query: 532 YDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANV 591
+ D EL V Y +QR+KGLGEM QLWETT+NPE R L ++ I+DAA A
Sbjct: 554 WSDEELDSVTKKVGKG--YMLQRYKGLGEMNADQLWETTMNPETRTLIRVKIDDAARAER 611
Query: 592 VFSSLMGARVDTRKELIQ 609
++LMG +V+ R++ I+
Sbjct: 612 RVTTLMGDKVEPRRKWIE 629
>UNIPROTKB|Q59192 [details] [associations]
symbol:parE "DNA topoisomerase 4 subunit B" species:224308
"Bacillus subtilis subsp. subtilis str. 168" [GO:0003918 "DNA
topoisomerase type II (ATP-hydrolyzing) activity" evidence=IBA]
[GO:0006261 "DNA-dependent DNA replication" evidence=IBA]
[GO:0006265 "DNA topological change" evidence=IBA] [GO:0007059
"chromosome segregation" evidence=IBA] [GO:0009295 "nucleoid"
evidence=IBA] InterPro:IPR001241 InterPro:IPR002288
InterPro:IPR003594 InterPro:IPR005740 InterPro:IPR013506
InterPro:IPR013759 InterPro:IPR013760 InterPro:IPR018522
Pfam:PF00204 Pfam:PF00986 Pfam:PF02518 PRINTS:PR00418
PROSITE:PS00177 SMART:SM00387 SMART:SM00433 Pfam:PF01751
InterPro:IPR006171 GO:GO:0005524 GO:GO:0005694 GO:GO:0007059
GO:GO:0006261 EMBL:AL009126 GenomeReviews:AL009126_GR
Gene3D:3.30.565.10 SUPFAM:SSF55874 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0009295
GO:GO:0006265 GO:GO:0003918 SUPFAM:SSF56719 eggNOG:COG0187
Gene3D:3.40.50.670 PROSITE:PS50880 HOGENOM:HOG000075154 EMBL:Z73234
EMBL:AF024713 PIR:C69637 RefSeq:NP_389691.2
ProteinModelPortal:Q59192 SMR:Q59192
EnsemblBacteria:EBBACT00000000468 GeneID:936151 KEGG:bsu:BSU18090
PATRIC:18975449 GenoList:BSU18090 KO:K02622 OMA:TDGTGLH
ProtClustDB:PRK05559 BioCyc:BSUB:BSU18090-MONOMER BindingDB:Q59192
ChEMBL:CHEMBL3485 HAMAP:MF_00939 TIGRFAMs:TIGR01058 Uniprot:Q59192
Length = 655
Score = 1218 (433.8 bits), Expect = 6.3e-124, P = 6.3e-124
Identities = 270/622 (43%), Positives = 367/622 (59%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLVYEI+DN+VDE AG+ +I V + DNS+SV D GRG+P +H
Sbjct: 29 MYIGSTDARGLHHLVYEIVDNSVDEVLAGHGDHIIVKIHKDNSISVQDRGRGMPTGMHKL 88
Query: 61 TNKSALETVLTVLHAXXXXXXXXXXXXXXXXXXXXXXXXXNALSESLEVTVWRDGMEYHQ 120
K E +LTVLHA NALSE L VT+ RDG Y Q
Sbjct: 89 -GKPTPEVILTVLHAGGKFGQGGYKTSGGLHGVGASVV--NALSEWLTVTIERDGFVYQQ 145
Query: 121 KYSRG-KPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLN 179
++ G KPVT+L + + GT F PD +F+T ++ T++ R+RE AFL
Sbjct: 146 RFENGGKPVTSLE----KIGKTKKTGTLTHFKPDPTMFSTTT-YNFETLSERLRESAFLL 200
Query: 180 PKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGITIDLA 239
L I L E +D Q +++ G+E +V +LN +K L +VV F + I +D A
Sbjct: 201 KGLKIELIDERND----QREVFYYENGIEAFVAYLNEEKDVLSEVVSFEGEHHSIEVDFA 256
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
Q+ +D YS+ +L + N++RT DGGTH G K ++TR N +K +K+KD +L G
Sbjct: 257 FQF-NDGYSENILSFVNNVRTKDGGTHESGAKTAMTRAFNEYARKVALLKEKDKNLEGTD 315
Query: 300 VREGLTCIISVRVPNP--EFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVXXXXX 357
+REGL+ IISVR+P +FEGQTK +LG E R VD V E L +LE + D
Sbjct: 316 IREGLSAIISVRIPEELLQFEGQTKGKLGTSEARSAVDAIVSEQLAYFLEENRDTATLLV 375
Query: 358 XXXXXXXXXXXXXXXXXXXVR--QKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGG 415
R +K ++L GKL S P ++E+++VEGDSAGG
Sbjct: 376 KKAIKASQAREAARKAREEARSGKKRKKSEATLSGKLTPAGSRNPAKNELYLVEGDSAGG 435
Query: 416 SAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRY 475
SAKQGRDRRFQA+LPLRGK++N E+ A ++KNEEI +I A+G GV G DF + + Y
Sbjct: 436 SAKQGRDRRFQAVLPLRGKVINTEKAKLADIFKNEEINTIIHAIGGGV-GADFSIDDINY 494
Query: 476 HKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERG---KQV-QYC 531
KIII+TDAD DGAHI+ LLLTFFYRY K L + G +++ +PPLYKV +G K++ +Y
Sbjct: 495 DKIIIMTDADTDGAHIQVLLLTFFYRYMKPLIEHGKVFIALPPLYKVSKGSGKKEIIEYA 554
Query: 532 YDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANV 591
+ D E+ V Y+IQR+KGLGEM QLWETT+NPE R L ++ I+DAA
Sbjct: 555 WSDEEMGDVLKKVGKG--YTIQRYKGLGEMNADQLWETTMNPESRTLVRVKIDDAARVER 612
Query: 592 VFSSLMGARVDTRKELIQ-NAA 612
++LMG +V+ R++ I+ N A
Sbjct: 613 RVTTLMGDKVEPRRKWIEKNVA 634
>UNIPROTKB|A9WGP2 [details] [associations]
symbol:gyrB "DNA gyrase subunit B" species:324602
"Chloroflexus aurantiacus J-10-fl" [GO:0003918 "DNA topoisomerase
type II (ATP-hydrolyzing) activity" evidence=IBA] [GO:0006261
"DNA-dependent DNA replication" evidence=IBA] [GO:0006265 "DNA
topological change" evidence=IBA] [GO:0007059 "chromosome
segregation" evidence=IBA] [GO:0009295 "nucleoid" evidence=IBA]
HAMAP:MF_01898 InterPro:IPR001241 InterPro:IPR002288
InterPro:IPR003594 InterPro:IPR011557 InterPro:IPR013506
InterPro:IPR013759 InterPro:IPR013760 InterPro:IPR018522
Pfam:PF00204 Pfam:PF00986 Pfam:PF02518 PRINTS:PR00418
PROSITE:PS00177 SMART:SM00387 SMART:SM00433 Pfam:PF01751
InterPro:IPR006171 GO:GO:0005524 GO:GO:0005737 GO:GO:0005694
GO:GO:0007059 GO:GO:0006261 Gene3D:3.30.565.10 SUPFAM:SSF55874
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 EMBL:CP000909 GenomeReviews:CP000909_GR
GO:GO:0009295 GO:GO:0006265 GO:GO:0003918 SUPFAM:SSF56719
eggNOG:COG0187 KO:K02470 Gene3D:3.40.50.670 TIGRFAMs:TIGR01059
OMA:IFETTEF ProtClustDB:PRK05644 HOGENOM:HOG000075154
RefSeq:YP_001636597.1 ProteinModelPortal:A9WGP2 STRING:A9WGP2
GeneID:5827483 KEGG:cau:Caur_3009 PATRIC:21417339
BioCyc:CAUR324602:GIXU-3058-MONOMER Uniprot:A9WGP2
Length = 636
Score = 1216 (433.1 bits), Expect = 1.0e-123, P = 1.0e-123
Identities = 255/620 (41%), Positives = 364/620 (58%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG T GLH +V E++DN+VDE AG A+++ V + D SV+V+D+G GIP+ +HP
Sbjct: 29 MYIGPTDINGLHTMVREVVDNSVDEVMAGRATSVSVTIHRDGSVTVSDDGSGIPVGIHPK 88
Query: 61 TNKSALETVLTVLHAXXXXXXXXXXXXXXXXXXXXXXXXXNALSESLEVTVWRDGMEYHQ 120
S L V+T LHA NALS + V V+R+G Y+Q
Sbjct: 89 EGISTLTLVMTRLHAGGKFGSGGYKVSSGLHGVGVSAV--NALSAYMRVDVYRNGRHYYQ 146
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y G PVT V+ ++ DR GT RF PD + T + ++ +T+A R RE+++LN
Sbjct: 147 EYRAGVPVTD----VIDLEPTDRHGTTTRFLPDTSIIQT-LDYNFDTLAQRFREMSYLNK 201
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGF-RKDVDGITIDLA 239
L E ++ E N ++F GG+ YV+ LN +K LH + + VD + +++A
Sbjct: 202 GLRFKFVDERTNRELN----FYFEGGIVSYVRHLNKEKTVLHRQPFYVERIVDDVMVEVA 257
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
LQ+ +D + +AN+I DGG+H+ G + +LTR +N+ + +KD + +L+G+
Sbjct: 258 LQYTDSFDTDNVYTFANNINNADGGSHLSGFRTALTRVINNYARAKGLLKDNESNLTGDD 317
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVXXXXXXX 359
VREGLT +ISV++ +P+F QTK +L +PE V + + +L+ +P
Sbjct: 318 VREGLTAVISVKLKDPQFSSQTKEKLVSPEAASAVATVFSDAFSAWLDENPTEARRIIEK 377
Query: 360 XXXXXXXXXXXXXXXXXVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
R KS + SLPGKLADCS P E++IVEGDSAGG+AKQ
Sbjct: 378 AISAARTRLAVQKVRETAR-KSAMEGFSLPGKLADCSDPNPARCELYIVEGDSAGGTAKQ 436
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRDRRFQAILPLRGKILNVE+ M N E++ LI A+G + G+ F LRYH+I
Sbjct: 437 GRDRRFQAILPLRGKILNVEKSRLDRMLSNAEVRALITAIGTSI-GDQFDLSKLRYHRIF 495
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
++TDADVDG+HIRTLLLTFF+R+ + L G +++ PPLY+++ G++ Y Y DAE
Sbjct: 496 LMTDADVDGSHIRTLLLTFFFRHMRPLITNGHLFIAQPPLYRIKHGREQVYTYSDAERDA 555
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
S P IQR+KGLGEM QLWETT+NP+ R++ Q+ +EDAA A+ F+ LMG
Sbjct: 556 YLSKLPPGTKVEIQRYKGLGEMNAEQLWETTMNPQNRVILQVTLEDAARADETFTMLMGD 615
Query: 600 RVDTRKELIQNAAN-LVNLD 618
V R+ IQ AN +V LD
Sbjct: 616 LVPPRRRFIQTHANEVVELD 635
>UNIPROTKB|O67137 [details] [associations]
symbol:gyrB "DNA gyrase subunit B" species:224324 "Aquifex
aeolicus VF5" [GO:0003918 "DNA topoisomerase type II
(ATP-hydrolyzing) activity" evidence=IBA] [GO:0006261
"DNA-dependent DNA replication" evidence=IBA] [GO:0006265 "DNA
topological change" evidence=IBA] [GO:0007059 "chromosome
segregation" evidence=IBA] [GO:0009295 "nucleoid" evidence=IBA]
HAMAP:MF_01898 InterPro:IPR001241 InterPro:IPR002288
InterPro:IPR003594 InterPro:IPR011557 InterPro:IPR013506
InterPro:IPR013759 InterPro:IPR013760 InterPro:IPR018522
Pfam:PF00204 Pfam:PF00986 Pfam:PF02518 PRINTS:PR00418
PROSITE:PS00177 SMART:SM00387 SMART:SM00433 Pfam:PF01751
InterPro:IPR006171 GO:GO:0005524 GO:GO:0005737 GO:GO:0005694
GO:GO:0007059 GO:GO:0006261 Gene3D:3.30.565.10 SUPFAM:SSF55874
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 GO:GO:0009295 EMBL:AE000657
GenomeReviews:AE000657_GR GO:GO:0006265 GO:GO:0003918
SUPFAM:SSF56719 eggNOG:COG0187 HOGENOM:HOG000075155 KO:K02470
Gene3D:3.40.50.670 TIGRFAMs:TIGR01059 PROSITE:PS50880 PIR:F70388
RefSeq:NP_213700.1 ProteinModelPortal:O67137 SMR:O67137
PRIDE:O67137 GeneID:1193771 KEGG:aae:aq_1026 PATRIC:20959360
OMA:IFETTEF ProtClustDB:PRK14939 BioCyc:AAEO224324:GJBH-733-MONOMER
Uniprot:O67137
Length = 792
Score = 1210 (431.0 bits), Expect = 4.4e-123, P = 4.4e-123
Identities = 270/624 (43%), Positives = 381/624 (61%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG G RGLHHL++EILDNAVDEA AGYA NI V + DNSV+V D+GRGIP+D+HP
Sbjct: 32 MYIGDIGERGLHHLIWEILDNAVDEAVAGYARNISVTIHRDNSVTVEDDGRGIPVDIHPE 91
Query: 61 TNKSALETVLTVLHAXXXXXXXXXXXXXXXXXXXXXXXXXNALSESLEVTVWRDGMEYHQ 120
T K A+E V T+L A NALSE L V V+RDG Y
Sbjct: 92 TGKPAVEMVFTMLGAGGKFEKKVYTYSGGLHGVGASVV--NALSEWLIVEVYRDGKIYRM 149
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF-TTAIQFDHNTIAGRIRELAFLN 179
+ RG+ V L HV+ ++K R GT++ F PD ++F TT I+FD + R+RELA+LN
Sbjct: 150 AFKRGEVVEPL--HVVG-ETKKR-GTKVSFKPDPEIFETTEIKFD--IVEKRVRELAYLN 203
Query: 180 PKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDL 238
P++ L +D ++ Y F G+EE V++LN K+PL D++ + + +G+ +D+
Sbjct: 204 PEVKFEL----TDERLGKHLIYKFDRGIEELVKYLNEGKEPLFKDIIRIQGEKEGVIVDI 259
Query: 239 ALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGE 298
A Q+ D Y + + + N+I+T++GGTH+ G ++ L++ + + + K K+ S +GE
Sbjct: 260 AFQYVKD-YKERIESFVNNIKTVEGGTHVTGFRSGLSKAVIRMAQGLKLAKELKKSFTGE 318
Query: 299 HVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVXXXXXX 358
VREGLT +++ +VPNP+FEGQTKT+LGN V+++V+ ++LT Y E DV
Sbjct: 319 DVREGLTAVVACKVPNPQFEGQTKTKLGNQNVKQIVESITYDFLTSYFEKKRDVLKAIVE 378
Query: 359 XXXXXXXXXXXXXXXXXXVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAK 418
VR+KS L LPGKLADCS T P + EIF+VEGDSAGGSAK
Sbjct: 379 KAIEAALAREAAKKAKELVRRKSPLEEGVLPGKLADCSETDPSKCEIFLVEGDSAGGSAK 438
Query: 419 QGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKI 478
Q RDRR+QAILPLRGKI+NVE+ + N+EI+ ++ ALG G+ GED + LRYHKI
Sbjct: 439 QARDRRYQAILPLRGKIINVEKARIDKVLSNDEIKAIVSALGCGI-GEDLDLKKLRYHKI 497
Query: 479 IILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELK 538
I++TDADVDG+HIRTLLLTFFYR+ L +EG +Y+ PPLY+V++GK+ Y DD E +
Sbjct: 498 ILMTDADVDGSHIRTLLLTFFYRFMPKLVEEGYVYIAEPPLYRVKKGKKEIYIKDDKEFE 557
Query: 539 K--VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSL 596
+ L + + GE + V+L L + + LV + E N+V + L
Sbjct: 558 HFLLNEIREKGRLVDAREKEFKGEEL-VRLL-IDLKDYEDAYRALV-KSKGE-NLV-NFL 612
Query: 597 MGARVDTRKELIQNAANLVNLDHL 620
+ RV R+E ++N A + + HL
Sbjct: 613 LTHRV--REEDLRNPARVKEITHL 634
Score = 200 (75.5 bits), Expect = 2.2e-12, P = 2.2e-12
Identities = 40/71 (56%), Positives = 54/71 (76%)
Query: 552 IQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNA 611
+QR+KGLGEM P QLWETT+NP+ R LK++ IEDAAEA+ +F+ LMG +V+ R+E I+
Sbjct: 724 VQRYKGLGEMNPEQLWETTMNPKTRRLKKVKIEDAAEADRIFTILMGEQVEPRREFIEAY 783
Query: 612 ANLVNLDHLDI 622
A V HLD+
Sbjct: 784 AKEVK--HLDV 792
>TIGR_CMR|NSE_0721 [details] [associations]
symbol:NSE_0721 "DNA gyrase, B subunit" species:222891
"Neorickettsia sennetsu str. Miyayama" [GO:0003916 "DNA
topoisomerase activity" evidence=ISS] [GO:0003918 "DNA
topoisomerase type II (ATP-hydrolyzing) activity" evidence=ISS]
[GO:0006265 "DNA topological change" evidence=ISS] [GO:0009330 "DNA
topoisomerase complex (ATP-hydrolyzing)" evidence=ISS]
HAMAP:MF_01898 InterPro:IPR001241 InterPro:IPR002288
InterPro:IPR003594 InterPro:IPR011557 InterPro:IPR013506
InterPro:IPR013759 InterPro:IPR013760 InterPro:IPR018522
Pfam:PF00204 Pfam:PF00986 Pfam:PF02518 PRINTS:PR00418
PROSITE:PS00177 SMART:SM00387 SMART:SM00433 Pfam:PF01751
InterPro:IPR006171 GO:GO:0005524 GO:GO:0005737 GO:GO:0005694
GO:GO:0006261 Gene3D:3.30.565.10 SUPFAM:SSF55874 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211 EMBL:CP000237
GenomeReviews:CP000237_GR GO:GO:0006265 GO:GO:0003918
SUPFAM:SSF56719 eggNOG:COG0187 HOGENOM:HOG000075155 KO:K02470
Gene3D:3.40.50.670 TIGRFAMs:TIGR01059 OMA:IFETTEF
ProtClustDB:PRK14939 RefSeq:YP_506597.1 ProteinModelPortal:Q2GD49
SMR:Q2GD49 STRING:Q2GD49 GeneID:3932056 KEGG:nse:NSE_0721
PATRIC:22681457 BioCyc:NSEN222891:GHFU-733-MONOMER Uniprot:Q2GD49
Length = 783
Score = 1054 (376.1 bits), Expect = 5.8e-122, Sum P(2) = 5.8e-122
Identities = 224/542 (41%), Positives = 326/542 (60%)
Query: 1 MYIGSTGP-RGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHP 59
MYIG T GLH +VYE++DN+VDE+ AGY + IEV + D S+SV DNGRG+P D+H
Sbjct: 26 MYIGDTDDGSGLHQMVYEVVDNSVDESLAGYCTAIEVVIDVDGSISVEDNGRGMPTDMH- 84
Query: 60 ATNKSALETVLTVLHAXXXXXXXXXXXXXXXXXXXXXXXXXNALSESLEVTVWRDGMEYH 119
SA E ++T LHA NALS+ L++T++RDG +
Sbjct: 85 GEGVSAAEVIMTQLHAGGKFDQSSYKVSGGLHGVGVSVV--NALSDWLKLTIYRDGKVHF 142
Query: 120 QKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLN 179
++ G+ V +L+ + + D+ GT + F P + F + +T+ R REL+FLN
Sbjct: 143 AEFENGETVRSLS---VTGECGDKTGTLVHFLPSRSTFKNTTEVSFSTLENRFRELSFLN 199
Query: 180 PKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDV-VGFRKDVDGITIDL 238
P L I+L + +F +GG EE+V +L+ K+P+H + VD I ID+
Sbjct: 200 PGLRISLLDMRKGSSTGKV-VFFSSGGTEEFVAYLDRSKQPIHSTPIRVVGGVDSIAIDV 258
Query: 239 ALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGE 298
++QW +D+Y + +L + N+I+ DGGTH+ +++++TR +++ K +K + +SGE
Sbjct: 259 SMQW-NDSYYENVLCFTNNIKQKDGGTHLAALRSAMTRVMHNYIVKENLIKKDKVVVSGE 317
Query: 299 HVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVXXXXXX 358
VREGL+ I+SV++P+P+F QTK +L + EV+ V+++ V + L +LE +P
Sbjct: 318 DVREGLSAILSVKLPDPKFSSQTKEKLISSEVKPVIEKIVSDALASWLEENPSSARVIAR 377
Query: 359 XXXXXXXXXXXXXXXXXXVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAK 418
R+K L ++LPGKLADC +PE SE+ IVEGDSAGGSAK
Sbjct: 378 KVVESALAREAAKKARDLTRRKGGLEITTLPGKLADCQEKSPELSELLIVEGDSAGGSAK 437
Query: 419 QGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKI 478
QGRDR+ QA+LPLRGKILNVE+ + + EI NLI ALG + E+F + +RYHKI
Sbjct: 438 QGRDRKTQAVLPLRGKILNVEKTRFHKVIGSAEIGNLIAALGTSIGEEEFNIDKIRYHKI 497
Query: 479 IILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVER-GKQVQYCYDDAEL 537
II+TDADVDG HIRTLLLTFF+RY + + + G +Y+ PLYKV R G V Y DDA L
Sbjct: 498 IIMTDADVDGLHIRTLLLTFFFRYARPIVERGYLYIAQTPLYKVMRKGADV-YLRDDAAL 556
Query: 538 KK 539
++
Sbjct: 557 EE 558
Score = 166 (63.5 bits), Expect = 5.8e-122, Sum P(2) = 5.8e-122
Identities = 34/68 (50%), Positives = 47/68 (69%)
Query: 552 IQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKE-LIQN 610
+QRFKGLGEM P QLW TTL+P R + ++ IE+AA A+ + S LMG V R++ ++ N
Sbjct: 715 LQRFKGLGEMNPEQLWSTTLDPSNRTIFKVTIEEAAVADQMCSMLMGDAVGPRRDFIVNN 774
Query: 611 AANLVNLD 618
A N N+D
Sbjct: 775 ALNASNID 782
>TIGR_CMR|APH_0716 [details] [associations]
symbol:APH_0716 "DNA gyrase, B subunit" species:212042
"Anaplasma phagocytophilum HZ" [GO:0003916 "DNA topoisomerase
activity" evidence=ISS] [GO:0003918 "DNA topoisomerase type II
(ATP-hydrolyzing) activity" evidence=ISS] [GO:0006265 "DNA
topological change" evidence=ISS] [GO:0009330 "DNA topoisomerase
complex (ATP-hydrolyzing)" evidence=ISS] HAMAP:MF_01898
InterPro:IPR001241 InterPro:IPR002288 InterPro:IPR003594
InterPro:IPR011557 InterPro:IPR013506 InterPro:IPR013759
InterPro:IPR013760 InterPro:IPR018522 Pfam:PF00204 Pfam:PF00986
Pfam:PF02518 PRINTS:PR00418 PROSITE:PS00177 SMART:SM00387
SMART:SM00433 Pfam:PF01751 InterPro:IPR006171 GO:GO:0005524
GO:GO:0005737 GO:GO:0005694 GO:GO:0006261 EMBL:CP000235
GenomeReviews:CP000235_GR Gene3D:3.30.565.10 SUPFAM:SSF55874
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 GO:GO:0006265 GO:GO:0003918 SUPFAM:SSF56719
eggNOG:COG0187 HOGENOM:HOG000075155 KO:K02470 Gene3D:3.40.50.670
TIGRFAMs:TIGR01059 OMA:IFETTEF ProtClustDB:PRK14939
RefSeq:YP_505297.1 ProteinModelPortal:Q2GK04 SMR:Q2GK04
STRING:Q2GK04 GeneID:3930586 KEGG:aph:APH_0716 PATRIC:20950116
BioCyc:APHA212042:GHPM-734-MONOMER Uniprot:Q2GK04
Length = 793
Score = 1043 (372.2 bits), Expect = 5.1e-121, Sum P(2) = 5.1e-121
Identities = 223/544 (40%), Positives = 322/544 (59%)
Query: 1 MYIGSTGP-RGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHP 59
MYIG T GLHH+ YE++DNA+DEA AG+ + I++ + AD S+SV DNGRGIPID+H
Sbjct: 24 MYIGDTDDGSGLHHMAYEVIDNAIDEALAGFCNKIDIVIAADGSISVTDNGRGIPIDIHE 83
Query: 60 ATNKSALETVLTVLHAXXXXXXXXXXXXXXXXXXXXXXXXXNALSESLEVTVWRDGMEYH 119
SA E ++T LHA NALS LE+ ++++G EY
Sbjct: 84 EEGISAAEVIMTQLHAGGKFDHNSYKVSGGLHGVGVSVV--NALSSWLELVIYKEGREYF 141
Query: 120 QKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLN 179
++ GK V L + + +++GT +RF P VF+ F ++T+ RIREL+FLN
Sbjct: 142 MRFEEGKAVAPLK---MVGECGNKKGTCVRFMPSSDVFSFT-DFSYSTLENRIRELSFLN 197
Query: 180 PKLTIALRKEDSDP--EKNQYNEYFFAG-GLEEYVQWLNTDKKPLHDVVGFRKDVDGITI 236
++I+L+ P E N N A G+ +V++L+ +K P+ V+ + G I
Sbjct: 198 SNVSISLKDLRESPVLESNFGNVSDAATKGVSLFVEYLDRNKTPVTPVITLSGIMSGYEI 257
Query: 237 DLALQWC-SDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISL 295
+ + C +D+Y + ML + N+IR +GGTH+ G +++LTR +N+ +K +S+
Sbjct: 258 SVEVSMCWNDSYYENMLCFTNNIRQREGGTHLAGFRSALTRCVNNYATNEGYLKKAKVSI 317
Query: 296 SGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVXXX 355
GE VREGLTC++S+++P+P F QTK +L + E R VV+ + E L+ E +P +
Sbjct: 318 IGEDVREGLTCVLSIKMPDPRFSSQTKDKLVSSEARLVVESIMFEKLSSIFETNPKLAMS 377
Query: 356 XXXXXXXXXXXXXXXXXXXXXVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGG 415
++ + L +S+PGKLADC +PE SE+FIVEG+SAGG
Sbjct: 378 VVERVIRSAKGREAARKAREVIKSRGTLDFTSIPGKLADCQEKSPELSELFIVEGNSAGG 437
Query: 416 SAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALG--LGVKGEDFKKEAL 473
SAKQGRDRR QA+L LRGKILNVER + EI +LI A+G +G+ D K +
Sbjct: 438 SAKQGRDRRCQAVLSLRGKILNVERVGLDRTLSSSEITSLIMAIGSNIGIGSFDISK--V 495
Query: 474 RYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYD 533
RYHKIII+TDADVDG+HIRTLLLTFF+RY + L D G +Y+ PPLYK+ + K+ Y +
Sbjct: 496 RYHKIIIMTDADVDGSHIRTLLLTFFFRYMRELIDAGYLYIAQPPLYKLTKHKKDTYIKN 555
Query: 534 DAEL 537
D L
Sbjct: 556 DEAL 559
Score = 168 (64.2 bits), Expect = 5.1e-121, Sum P(2) = 5.1e-121
Identities = 35/69 (50%), Positives = 48/69 (69%)
Query: 551 SIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQN 610
++QRFKGLGEM QLW+TTLNP+ R L ++ I DA A+ +FS LMG V+ R++ I N
Sbjct: 724 ALQRFKGLGEMNADQLWDTTLNPQTRTLLKVKIADAEAADAIFSVLMGDFVEPRRDFINN 783
Query: 611 -AANLVNLD 618
A + N+D
Sbjct: 784 NALKVQNID 792
>TIGR_CMR|ECH_0620 [details] [associations]
symbol:ECH_0620 "DNA gyrase, B subunit" species:205920
"Ehrlichia chaffeensis str. Arkansas" [GO:0003916 "DNA
topoisomerase activity" evidence=ISS] [GO:0003918 "DNA
topoisomerase type II (ATP-hydrolyzing) activity" evidence=ISS]
[GO:0006265 "DNA topological change" evidence=ISS] [GO:0009330 "DNA
topoisomerase complex (ATP-hydrolyzing)" evidence=ISS]
HAMAP:MF_01898 InterPro:IPR001241 InterPro:IPR002288
InterPro:IPR003594 InterPro:IPR011557 InterPro:IPR013506
InterPro:IPR013759 InterPro:IPR013760 InterPro:IPR018522
Pfam:PF00204 Pfam:PF00986 Pfam:PF02518 PRINTS:PR00418
PROSITE:PS00177 SMART:SM00387 SMART:SM00433 Pfam:PF01751
InterPro:IPR006171 GO:GO:0005524 GO:GO:0005737 GO:GO:0005694
EMBL:CP000236 GenomeReviews:CP000236_GR GO:GO:0006261
Gene3D:3.30.565.10 SUPFAM:SSF55874 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0006265
GO:GO:0003918 SUPFAM:SSF56719 eggNOG:COG0187 HOGENOM:HOG000075155
KO:K02470 Gene3D:3.40.50.670 TIGRFAMs:TIGR01059 OMA:IFETTEF
ProtClustDB:PRK14939 RefSeq:YP_507430.1 ProteinModelPortal:Q2GGK3
STRING:Q2GGK3 GeneID:3927738 KEGG:ech:ECH_0620 PATRIC:20576692
BioCyc:ECHA205920:GJNR-622-MONOMER Uniprot:Q2GGK3
Length = 798
Score = 1037 (370.1 bits), Expect = 8.4e-121, Sum P(2) = 8.4e-121
Identities = 218/546 (39%), Positives = 330/546 (60%)
Query: 1 MYIGSTGP-RGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHP 59
MYIG T GLHH+VYE++DN++DEA AG+ + I++ + +D SVSV DNGRGIP+D+H
Sbjct: 24 MYIGDTDDGSGLHHMVYEVIDNSIDEALAGFCNKIDIVIQSDGSVSVVDNGRGIPVDMHE 83
Query: 60 ATNKSALETVLTVLHAXXXXXXXXXXXXXXXXXXXXXXXXXNALSESLEVTVWRDGMEYH 119
SA E ++T LHA NALS LE+T+WR+G EY
Sbjct: 84 DEGMSAAEVIMTQLHAGGKFDHNSYKVSGGLHGVGISVV--NALSSWLELTIWRNGKEYF 141
Query: 120 QKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLN 179
++ G V +L+ + ++ ++GT+I F P K +F++ I F ++T+ RIREL+FLN
Sbjct: 142 MRFEDGITVKSLS---VVGENTTKKGTKITFLPSKNIFSS-INFSYSTLENRIRELSFLN 197
Query: 180 PKLTIALRKE------DSD---PEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKD 230
+ + L+ +S + ++ N+ G +V++L+ +K + VV
Sbjct: 198 SNINMNLKDLRGAQILNSSFGLKDNSKVND-IEDRGTAAFVKYLDRNKTAVTKVVHIEGI 256
Query: 231 V--DGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTV 288
V GI+++L++ W +D+Y + ML + N+IR DGGTH+ G ++++TR +N+ +
Sbjct: 257 VLEHGISLELSMHW-NDSYYENMLCFTNNIRQKDGGTHLAGFRSAMTRCINNYATNEGFL 315
Query: 289 KDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLEL 348
K +++ GE VREGLTC++++++P+P+F QTK +L + E R V+ V E LT E
Sbjct: 316 KKAKVNILGEDVREGLTCVLAIKLPDPKFSSQTKDKLVSSEARTAVENIVYEKLTNIFET 375
Query: 349 HPDVXXXXXXXXXXXXXXXXXXXXXXXXVRQKSVLRSSSLPGKLADCSSTTPEESEIFIV 408
+P + ++ K+ + LPGKLADC +PE SE+FIV
Sbjct: 376 NPKLATSIIERIIRSAKGREAARRARDLIKSKNGFDFTILPGKLADCQEKSPELSELFIV 435
Query: 409 EGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDF 468
EG+SAGGSAKQGRDRR QA+L L+GKILNVER + + EI +LI A+G + E+F
Sbjct: 436 EGNSAGGSAKQGRDRRSQAVLSLKGKILNVERASLDRILSSAEIASLITAIGSNIGTENF 495
Query: 469 KKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQV 528
E +RYHK+II+TDADVDG+HIRTLLLTFF+RY + + ++G +Y+ PPLYKV + K+
Sbjct: 496 DIEKVRYHKVIIMTDADVDGSHIRTLLLTFFFRYMREVIEKGYLYIAQPPLYKVTKHKKE 555
Query: 529 QYCYDD 534
Y +D
Sbjct: 556 FYIKND 561
Score = 172 (65.6 bits), Expect = 8.4e-121, Sum P(2) = 8.4e-121
Identities = 36/69 (52%), Positives = 48/69 (69%)
Query: 551 SIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQN 610
++QRFKGLGEM QLW+TTLNPE R L ++ I D A+ +FS LMG V+ R++ I N
Sbjct: 729 TLQRFKGLGEMNADQLWDTTLNPETRTLLKIKIADCEAADSIFSVLMGDFVEPRRDFINN 788
Query: 611 -AANLVNLD 618
A N+ N+D
Sbjct: 789 NALNVQNID 797
>UNIPROTKB|P35886 [details] [associations]
symbol:gyrB "DNA gyrase subunit B" species:100226
"Streptomyces coelicolor A3(2)" [GO:0003918 "DNA topoisomerase type
II (ATP-hydrolyzing) activity" evidence=IBA] [GO:0006261
"DNA-dependent DNA replication" evidence=IBA] [GO:0006265 "DNA
topological change" evidence=IBA] [GO:0007059 "chromosome
segregation" evidence=IBA] [GO:0009295 "nucleoid" evidence=IBA]
HAMAP:MF_01898 InterPro:IPR001241 InterPro:IPR002288
InterPro:IPR003594 InterPro:IPR011557 InterPro:IPR013506
InterPro:IPR013759 InterPro:IPR013760 InterPro:IPR018522
Pfam:PF00204 Pfam:PF00986 Pfam:PF02518 PRINTS:PR00418
PROSITE:PS00177 SMART:SM00387 SMART:SM00433 Pfam:PF01751
InterPro:IPR006171 GO:GO:0005524 GO:GO:0005737 GO:GO:0005694
GO:GO:0007059 GO:GO:0006261 GenomeReviews:AL645882_GR
Gene3D:3.30.565.10 SUPFAM:SSF55874 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0009295
GO:GO:0006265 GO:GO:0003918 SUPFAM:SSF56719 EMBL:L27063
EMBL:AL939118 eggNOG:COG0187 KO:K02470 Gene3D:3.40.50.670
TIGRFAMs:TIGR01059 PROSITE:PS50880 OMA:IFETTEF ProtClustDB:PRK05644
HOGENOM:HOG000075154 RefSeq:NP_628061.1 ProteinModelPortal:P35886
GeneID:1099310 KEGG:sco:SCO3874 PATRIC:23737532 Uniprot:P35886
Length = 686
Score = 1176 (419.0 bits), Expect = 1.8e-119, P = 1.8e-119
Identities = 265/641 (41%), Positives = 382/641 (59%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGSTG RGLHHLV E++DN+VDEA AG+A I+V +L D V V DNGRGIP+ + P+
Sbjct: 53 MYIGSTGERGLHHLVQEVVDNSVDEALAGHADTIDVTILPDGGVRVVDNGRGIPVGIVPS 112
Query: 61 TNKSALETVLTVLHAXXXXXXXXXXXXXXXXXXXXXXXXXNALSESLEVTVWRDGMEYHQ 120
K A+E VLTVLHA NALS + V V DG + Q
Sbjct: 113 EGKPAVEVVLTVLHAGGKFGGGGYAVSGGLHGVGVSVV--NALSTRVAVEVKTDGYRWTQ 170
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF-TTAIQFDHNTIAGRIRELAFLN 179
+Y G P +L H ++ + GT + FW D +F TT F+ + +
Sbjct: 171 EYKLGVPTASLARH----EATEETGTTVTFWADGDIFETTDYSFETLSRRFQEMAFLNKG 226
Query: 180 PKLTIALRKEDS----------DPEKNQYNE--YFFAGGLEEYVQWLNTDKKPL-HD-VV 225
K+ + +E + + EK++ Y + GG+ ++V +LN+ K L H V+
Sbjct: 227 LKINLTDERESAKATAGADEAGEDEKHEVKSVSYHYEGGIVDFVTYLNSRKGELVHPTVI 286
Query: 226 GFR-KDVD-GITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGK 283
+D D +++++A+QW + Y++ + +AN I T +GGTH EG +A+LT +N +
Sbjct: 287 DLEAEDKDKSLSLEVAMQW-NGGYTEGVYSFANIIHTHEGGTHEEGFRAALTSLINKYAR 345
Query: 284 KSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLT 343
K +++KD +L+G+ +REGLT IISV++ P+FEGQTKT+LGN EV+ V + V E+LT
Sbjct: 346 DKKLLREKDDNLTGDDIREGLTAIISVKLAEPQFEGQTKTKLGNTEVKTFVQKVVYEHLT 405
Query: 344 EYLELHPDVXXXXXXXXXXXXXXXXXXXXXXXXVRQKSVLRSSSLPGKLADCSSTTPEES 403
++L+ +P+ R+K +L S+SLPGKL+DC S P +
Sbjct: 406 DWLDRNPNEAADIIRKGIQAAHARVAARKARDLTRRKGLLESASLPGKLSDCQSNDPTKC 465
Query: 404 EIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGV 463
EIFIVEGDSAGGSAK GR+ ++QAILP+RGKILNVE+ + +N+EIQ +I A G GV
Sbjct: 466 EIFIVEGDSAGGSAKSGRNPQYQAILPIRGKILNVEKARIDRILQNQEIQAMISAFGTGV 525
Query: 464 KGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVE 523
EDF E LRYHKII++ DADVDG HI TLLLTF +R+ + L + G +Y+ PPLYK++
Sbjct: 526 H-EDFDIEKLRYHKIILMADADVDGQHINTLLLTFLFRFMRPLVESGHVYLSRPPLYKIK 584
Query: 524 RGKQ-VQYCYDDAE----LKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRML 578
G+ +Y Y D E ++ + + S+QRFKGLGEM +L TT++ E R+L
Sbjct: 585 WGRDDFEYAYSDRERDALIEMGRQAGKRIREDSVQRFKGLGEMNAEELRITTMDQEHRVL 644
Query: 579 KQLVIEDAAEANVVFSSLMGARVDTRKELIQ-NAANLVNLD 618
Q+ ++DAA+A+ +FS LMG V+ R+ IQ NA ++ LD
Sbjct: 645 GQVTLDDAAQADDLFSVLMGEDVEARRAFIQRNAKDVRFLD 685
>UNIPROTKB|Q7RHG3 [details] [associations]
symbol:PY04024 "DNA topoisomerase II, putative"
species:73239 "Plasmodium yoelii yoelii" [GO:0003918 "DNA
topoisomerase type II (ATP-hydrolyzing) activity" evidence=IBA]
[GO:0006261 "DNA-dependent DNA replication" evidence=IBA]
[GO:0006265 "DNA topological change" evidence=IBA] [GO:0007059
"chromosome segregation" evidence=IBA] [GO:0009295 "nucleoid"
evidence=IBA] InterPro:IPR001241 InterPro:IPR002288
InterPro:IPR003594 InterPro:IPR013506 InterPro:IPR013759
InterPro:IPR013760 InterPro:IPR018522 Pfam:PF00204 Pfam:PF00986
Pfam:PF02518 PRINTS:PR00418 PROSITE:PS00177 SMART:SM00387
SMART:SM00433 Pfam:PF01751 InterPro:IPR006171 GO:GO:0005524
GO:GO:0005694 GO:GO:0007059 GO:GO:0006261 Gene3D:3.30.565.10
SUPFAM:SSF55874 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0009295 GO:GO:0006265
GO:GO:0003918 SUPFAM:SSF56719 eggNOG:COG0187 KO:K02470
Gene3D:3.40.50.670 HSSP:P06982 EMBL:AABL01001206 RefSeq:XP_724272.1
ProteinModelPortal:Q7RHG3 STRING:Q7RHG3 GeneID:3789597
KEGG:pyo:PY04024 EuPathDB:PlasmoDB:PY04024 Uniprot:Q7RHG3
Length = 930
Score = 522 (188.8 bits), Expect = 1.1e-116, Sum P(5) = 1.1e-116
Identities = 107/271 (39%), Positives = 174/271 (64%)
Query: 205 GGLEEYVQWLNTDK----KPLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRT 260
GGL+EY++ L +K K + V+ I +DL L+W ++ Y++ +L + N++ T
Sbjct: 407 GGLDEYMEKLTKNKTNIFKTNNKVISISCFQKNIHVDLKLKWVTNQYNENILSFVNNVNT 466
Query: 261 IDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQ 320
IDGGTH++ +K +++R++N KK++T+K+ +++ GE++REGLT I+S+++ NPEFEGQ
Sbjct: 467 IDGGTHVDAMKYAISRSINYNVKKNETIKNF-VNIPGEYIREGLTAILSIKMNNPEFEGQ 525
Query: 321 TKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVXXXXXXXXXXXXXXXXXXXXXXXXVRQK 380
TKT+LG+ ++ +++ + E L+E + P++ +R K
Sbjct: 526 TKTKLGSYYLKPILESIIFEKLSEIFDFEPNLLNTIYLKALQAKKSDEEAKAARDLIRSK 585
Query: 381 S-VLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVE 439
+ S+ LPGKL DC S ++EIFIVEGDSA GSAKQ R+R QAILPL+GKILNVE
Sbjct: 586 NNQYYSTILPGKLVDCISDDISKNEIFIVEGDSAAGSAKQARNREIQAILPLKGKILNVE 645
Query: 440 R-KDEAAMYKNEEIQNLIRALGLGVKGEDFK 469
+ K+ +++N E+++LI A+GL V ++ K
Sbjct: 646 KIKNNKKIFENIELKSLITAIGLNVNYDNSK 676
Score = 222 (83.2 bits), Expect = 1.1e-116, Sum P(5) = 1.1e-116
Identities = 42/75 (56%), Positives = 56/75 (74%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG+T +GLH +++EI+DNAVDE + I+V + D S+++ DNGRGIP D+H
Sbjct: 133 MYIGNTDSKGLHQILFEIVDNAVDEYNNHECNQIKVIIHNDESITIEDNGRGIPCDIHEK 192
Query: 61 TNKSALETVLTVLHA 75
T KSALETVLTVLH+
Sbjct: 193 TKKSALETVLTVLHS 207
Score = 190 (71.9 bits), Expect = 1.1e-116, Sum P(5) = 1.1e-116
Identities = 39/77 (50%), Positives = 49/77 (63%)
Query: 463 VKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKV 522
+K +F +LRY KIII+TDADVDG HI LLLTF YR+QK + + G +YV PPLYKV
Sbjct: 691 IKKNNFIDTSLRYGKIIIMTDADVDGEHICILLLTFLYRFQKEIIENGNVYVACPPLYKV 750
Query: 523 ERGKQVQYCYDDAELKK 539
K D+ + K
Sbjct: 751 TYNKFFDNNIKDSVISK 767
Score = 168 (64.2 bits), Expect = 1.1e-116, Sum P(5) = 1.1e-116
Identities = 34/71 (47%), Positives = 51/71 (71%)
Query: 544 FPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDT 603
F S+ Y IQRFKGLGEMM QLW TT++P+ R L ++ + DA +AN + +SLMG +
Sbjct: 859 FSSSKKYEIQRFKGLGEMMADQLWSTTMDPQVRKLIRVTVSDAIKANNLINSLMGEDSKS 918
Query: 604 RKE-LIQNAAN 613
RK+ +I+N+++
Sbjct: 919 RKDFIIKNSSS 929
Score = 139 (54.0 bits), Expect = 1.1e-116, Sum P(5) = 1.1e-116
Identities = 33/96 (34%), Positives = 52/96 (54%)
Query: 101 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 160
NALS ++V V+RD Y+ + +GK V L P+ ++GT+I + PD +F T
Sbjct: 287 NALSTFMKVNVFRDNKIYNIELEKGKVVKELNVQDCPIK---KRGTQIHYKPDNTIFKTN 343
Query: 161 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKN 196
I+ + I R+ +LA+LN KLT E + + N
Sbjct: 344 IKHNSEFIKNRLHQLAYLNDKLTFYFYDERNSNKGN 379
Score = 46 (21.3 bits), Expect = 8.9e-24, Sum P(3) = 8.9e-24
Identities = 22/85 (25%), Positives = 39/85 (45%)
Query: 215 NTDKKPLHDVVGFRKDVDGITIDLALQWCSDA----YSDTMLGYANSIRTIDGGTHIEGV 270
NTD K LH ++ F + VD + C+ ++D + ++ R I H +
Sbjct: 137 NTDSKGLHQIL-F-EIVDNAVDEYNNHECNQIKVIIHNDESITIEDNGRGIPCDIHEKTK 194
Query: 271 KASLTRTLNSLGKKSKTVKDKDISL 295
K++L L L +K + D DI++
Sbjct: 195 KSALETVLTVLHSGAKFLDD-DINM 218
>TIGR_CMR|CJE_0003 [details] [associations]
symbol:CJE_0003 "DNA gyrase, B subunit" species:195099
"Campylobacter jejuni RM1221" [GO:0003918 "DNA topoisomerase type
II (ATP-hydrolyzing) activity" evidence=ISS] [GO:0006265 "DNA
topological change" evidence=ISS] [GO:0009330 "DNA topoisomerase
complex (ATP-hydrolyzing)" evidence=ISS] HAMAP:MF_01898
InterPro:IPR001241 InterPro:IPR002288 InterPro:IPR003594
InterPro:IPR011557 InterPro:IPR013506 InterPro:IPR013759
InterPro:IPR013760 InterPro:IPR018522 Pfam:PF00204 Pfam:PF00986
Pfam:PF02518 PRINTS:PR00418 PROSITE:PS00177 SMART:SM00387
SMART:SM00433 Pfam:PF01751 InterPro:IPR006171 GO:GO:0005524
GO:GO:0005737 GO:GO:0005694 GO:GO:0006261 EMBL:CP000025
GenomeReviews:CP000025_GR Gene3D:3.30.565.10 SUPFAM:SSF55874
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 GO:GO:0006265 GO:GO:0003918 SUPFAM:SSF56719
eggNOG:COG0187 HOGENOM:HOG000075155 KO:K02470 Gene3D:3.40.50.670
TIGRFAMs:TIGR01059 OMA:IFETTEF ProtClustDB:PRK14939
RefSeq:YP_178032.1 ProteinModelPortal:Q5HXF3 STRING:Q5HXF3
GeneID:3230659 KEGG:cjr:CJE0003 PATRIC:20041695
BioCyc:CJEJ195099:GJC0-3-MONOMER Uniprot:Q5HXF3
Length = 769
Score = 1142 (407.1 bits), Expect = 7.1e-116, P = 7.1e-116
Identities = 236/539 (43%), Positives = 328/539 (60%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG T GLHH++YE++DN++DEA AG+ I+V + + S V+DNGRGIP+D+HP
Sbjct: 25 MYIGDTNIGGLHHMIYEVVDNSIDEAMAGHCDTIDVEITTEGSCIVSDNGRGIPVDMHPT 84
Query: 61 TNKSALETVLTVLHAXXXXXXXXXXXXXXXXXXXXXXXXXNALSESLEVTVWRDGMEYHQ 120
N L VLTVLHA NALS+ L TV R+G Y Q
Sbjct: 85 ENMPTLTVVLTVLHAGGKFDKDTYKVSGGLHGVGVSVV--NALSKKLVATVERNGEIYRQ 142
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
++S GK ++ + + GT I FWPD Q+F +FD+ +A R RELA+LNP
Sbjct: 143 EFSEGKVISEFGV----IGKSKKTGTTIEFWPDDQIFEVT-EFDYEILAKRFRELAYLNP 197
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGITIDLAL 240
K+TI + D ++ + F GG+ ++V LN K+ L + F D + + +++AL
Sbjct: 198 KITINFK----DNRVGKHESFHFEGGISQFVIDLNK-KEALTKAIFFSVDEEDVNVEVAL 252
Query: 241 QWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHV 300
+ +D YS+ +L + N+I+T DGGTH G + LTR +++ + + + ++KD ++GE V
Sbjct: 253 LY-NDTYSENLLSFVNNIKTPDGGTHEAGFRMGLTRVISNYIEANASAREKDNKITGEDV 311
Query: 301 REGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVXXXXXXXX 360
REGL ++SV+VP P+FEGQTK +LG+ VR +V ++ EYLT+Y E +P
Sbjct: 312 REGLIAVVSVKVPEPQFEGQTKGKLGSTYVRPIVSKASFEYLTKYFEENPIEAKAIMNKV 371
Query: 361 XXXXXXXXXXXXXXXXVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQG 420
R+K L +LPGKLADC S P ESEI++VEGDSAGGSAKQG
Sbjct: 372 LMAARGREAAKKARELTRKKESLSVGTLPGKLADCQSKDPSESEIYLVEGDSAGGSAKQG 431
Query: 421 RDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIII 480
R+R FQAILPLRGKILNVE+ + K+E+IQN+I A G G+ GEDF LRYHKIII
Sbjct: 432 RERSFQAILPLRGKILNVEKARLDKILKSEQIQNMITAFGCGI-GEDFDLSKLRYHKIII 490
Query: 481 LTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
+TDADVDG+HI+TLLLTFF+R+ L G IY+ PPLY ++ K+ Y D+ L +
Sbjct: 491 MTDADVDGSHIQTLLLTFFFRFMNELVANGHIYLAQPPLYLYKKAKKQIYLKDEKALSE 549
Score = 183 (69.5 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 64/205 (31%), Positives = 103/205 (50%)
Query: 422 DRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKI--I 479
++RF I +R I N NEE+ ++I+ L +G + + ++I
Sbjct: 587 EKRFNVISVIRYMIEN----SNLVKGNNEELFSVIKQF-LETQGHNILNHYINENEIRAF 641
Query: 480 ILTDADVDGAHIRTLLLTF-FYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAE-L 537
+ T ++ I L T Y +FD+ K +RG +++ D E L
Sbjct: 642 VQTQNGLEELVINEELFTHPLYEEANYIFDK----------IK-DRG--LEFDKDILEVL 688
Query: 538 KKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLM 597
+ V+++ A +IQR+KGLGEM P QLWETT++P R L ++ IEDA AN F+ M
Sbjct: 689 EDVETNAKKGA--TIQRYKGLGEMNPEQLWETTMDPSVRRLLKITIEDAQSANDTFNLFM 746
Query: 598 GARVDTRKELIQNAANLVNLDHLDI 622
G V+ R++ IQ A+ ++ HLD+
Sbjct: 747 GDEVEPRRDYIQ--AHAKDVKHLDV 769
>UNIPROTKB|Q9RVW5 [details] [associations]
symbol:DR_0906 "DNA gyrase, subunit B" species:243230
"Deinococcus radiodurans R1" [GO:0003918 "DNA topoisomerase type II
(ATP-hydrolyzing) activity" evidence=IBA] [GO:0006261
"DNA-dependent DNA replication" evidence=IBA] [GO:0006265 "DNA
topological change" evidence=IBA] [GO:0007059 "chromosome
segregation" evidence=IBA] [GO:0009295 "nucleoid" evidence=IBA]
InterPro:IPR001241 InterPro:IPR002288 InterPro:IPR003594
InterPro:IPR013506 InterPro:IPR013759 InterPro:IPR013760
InterPro:IPR018522 Pfam:PF00204 Pfam:PF00986 Pfam:PF02518
PRINTS:PR00418 PROSITE:PS00177 SMART:SM00387 SMART:SM00433
Pfam:PF01751 InterPro:IPR006171 GO:GO:0005524 GO:GO:0005694
GO:GO:0007059 GO:GO:0006261 Gene3D:3.30.565.10 SUPFAM:SSF55874
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 GO:GO:0009295 EMBL:AE000513
GenomeReviews:AE000513_GR GO:GO:0006265 GO:GO:0003918
SUPFAM:SSF56719 KO:K02470 Gene3D:3.40.50.670 OMA:IFETTEF
ProtClustDB:PRK05644 HOGENOM:HOG000075154 HSSP:P06982 PIR:A75461
RefSeq:NP_294630.1 ProteinModelPortal:Q9RVW5 SMR:Q9RVW5
GeneID:1799432 KEGG:dra:DR_0906 PATRIC:21629376
BioCyc:DRAD243230:GH46-1277-MONOMER Uniprot:Q9RVW5
Length = 663
Score = 1138 (405.7 bits), Expect = 1.9e-115, P = 1.9e-115
Identities = 262/634 (41%), Positives = 365/634 (57%)
Query: 1 MYI-GSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHP 59
MY+ G TG G H L+ EI+DN +DE AG+A I++ L AD S +V D+GRGIP+D+
Sbjct: 33 MYVQGGTGIDGYHQLLTEIIDNGIDEGLAGFAGEIQIVLHADGSATVTDDGRGIPVDIMK 92
Query: 60 ATNKSALETVLTVLHAXXXXXXXXXXXXXXXXXXXXXXXXXNALSESLEVTVWRDGMEYH 119
+ + A+E + + LHA NALS L+VTV + +H
Sbjct: 93 SKGRPAIEVIFSELHAGGKFGQGAYKVSGGLHGVGSTVV--NALSTYLDVTVNKHKQLHH 150
Query: 120 QKYSRGKPVTTLTCHVLPVDSKD-RQGTRIRFWPDKQVFTTAI-QFDHNTIAGRIRELAF 177
++ RG V L VL KD + T++ F PD +F QFD+ I R+RELA+
Sbjct: 151 IRFERGVLVQPL--EVLGATPKDVKWSTKVSFHPDPTIFKEFDNQFDYLRIRNRLRELAY 208
Query: 178 LNPKLTIALRKEDSDPEKNQYNEYFF--AGGLEEYVQWLNTDK-KPLHDV-VGFRKDVDG 233
L L I +R E ++ + E F GG+ + + L TD K L+D V R
Sbjct: 209 LTG-LKIVIRDERTELHGGEIKEEVFHEKGGIANFARALVTDDTKLLYDQPVVMRGTHAE 267
Query: 234 ITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDI 293
+ +++A + SD +L YAN IRT DGGT + G K + TR LN K +K +
Sbjct: 268 VEVEVAFIHANTYASDNILTYANMIRTRDGGTPLTGFKTAYTRVLNKYAKDKNLIKAGNP 327
Query: 294 SLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVX 353
SG+ + EG+ C++SV+V +P+FE Q K +L N E + V+ V E ++LE +P +
Sbjct: 328 VPSGDDLLEGIYCVVSVKVGDPQFESQAKVKLLNSEAQTAVNAIVGEKFAQFLEENPKIG 387
Query: 354 XXXXXXXXXXXXXXXXXXXXXXXVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSA 413
VR+ + L + LPGKLADCSS P ESE+FIVEG+SA
Sbjct: 388 KTIVEKAAEAARARDAARKARDIVRRSNPLENDDLPGKLADCSSQDPAESELFIVEGNSA 447
Query: 414 GGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGV--KGED--FK 469
GGSAK GR+RRFQAILPLRGKILNVE+ + + KN EI++LI A+G G KGE+ F
Sbjct: 448 GGSAKGGRERRFQAILPLRGKILNVEKAELNKILKNAEIRSLIGAIGAGFDGKGEEMRFD 507
Query: 470 KEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQ 529
E LRYHKI+I+TDAD+DG HI TLLLTFF+R+ + + ++G +Y+ PPLYK+ G Q +
Sbjct: 508 LENLRYHKIVIMTDADMDGGHITTLLLTFFFRFMRPIVEQGHLYIAQPPLYKITVGAQTK 567
Query: 530 -----YCYDDAELKK-VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVI 583
Y + + ELK+ V + + Y IQRFKGLGEM QLWETT+NPE R+LK++ I
Sbjct: 568 NNKGVYLFTNEELKEHVADAVKAGKKYEIQRFKGLGEMNAEQLWETTMNPETRVLKRVSI 627
Query: 584 EDAAEANVVFSSLMGARVDTRKELIQNAANLVNL 617
+D AN +F +LMG+ V RK+ I+ A +
Sbjct: 628 DDLIIANEIFDALMGSEVAPRKDFIRENARFAEI 661
>GENEDB_PFALCIPARUM|PFL1915w [details] [associations]
symbol:PFL1915w "dna gyrase subunit b, putative"
species:5833 "Plasmodium falciparum" [GO:0020011 "apicoplast"
evidence=IDA] InterPro:IPR001241 InterPro:IPR002288
InterPro:IPR003594 InterPro:IPR013506 InterPro:IPR013759
InterPro:IPR013760 InterPro:IPR018522 Pfam:PF00204 Pfam:PF00986
Pfam:PF02518 PRINTS:PR00418 PROSITE:PS00177 SMART:SM00387
SMART:SM00433 Pfam:PF01751 InterPro:IPR006171 GO:GO:0005524
GO:GO:0005694 EMBL:AE014188 Gene3D:3.30.565.10 SUPFAM:SSF55874
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 GO:GO:0020011 GO:GO:0006265 GO:GO:0003918
SUPFAM:SSF56719 KO:K02470 Gene3D:3.40.50.670 HOGENOM:HOG000075156
GenomeReviews:AE014188_GR HSSP:P06982 RefSeq:XP_001350789.1
ProteinModelPortal:Q8I528 IntAct:Q8I528 MINT:MINT-1670662
PRIDE:Q8I528 EnsemblProtists:PFL1915w:mRNA GeneID:811435
KEGG:pfa:PFL1915w EuPathDB:PlasmoDB:PF3D7_1239500 OMA:YDERSEN
ProtClustDB:PTZ00109 Uniprot:Q8I528
Length = 1006
Score = 503 (182.1 bits), Expect = 5.3e-112, Sum P(5) = 5.3e-112
Identities = 105/264 (39%), Positives = 166/264 (62%)
Query: 206 GLEEYVQWLNTDKKPL---HD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTI 261
GL EY+ + +K L +D ++ I IDL ++W S+ Y++ ++ + N++ T
Sbjct: 465 GLNEYITNITKNKTNLFKDNDKIISISCYHKNIYIDLRMKWLSNQYNENIISFVNNVNTT 524
Query: 262 DGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQT 321
DGGTH++ +K +++R +N KK++ +K+ +++ GE++REGLT I+SV++ NPEFEGQT
Sbjct: 525 DGGTHVDALKYAVSRCVNYNIKKNEMIKNF-VNIPGEYIREGLTAILSVKMNNPEFEGQT 583
Query: 322 KTRLGNPEVRKVVDQSVQEYLTEYLELHPDVXXXXXXXXXXXXXXXXXXXXXXXXVRQKS 381
KT+LG+ ++ +++ + E L+E + P++ +R K+
Sbjct: 584 KTKLGSHHLKSILESVIFEKLSEIFDFEPNLLSSIYFKALQAKLSDEEAKAARDLIRSKN 643
Query: 382 VLRSSS-LPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVER 440
SS+ LPGKL DC S +EIFIVEGDSA GSAKQ R+R QAILPL+GKILNVE+
Sbjct: 644 NQYSSTILPGKLVDCISDDISRNEIFIVEGDSAAGSAKQARNREIQAILPLKGKILNVEK 703
Query: 441 -KDEAAMYKNEEIQNLIRALGLGV 463
K+ +++N E+++LI ALGL V
Sbjct: 704 IKNNKRIFENSELKSLITALGLNV 727
Score = 221 (82.9 bits), Expect = 5.3e-112, Sum P(5) = 5.3e-112
Identities = 42/75 (56%), Positives = 57/75 (76%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG+T +GLH +++EI+DN+VDE + I+V + D+SV++ DNGRGIP D+H
Sbjct: 143 MYIGNTDVKGLHQILFEIIDNSVDEYNNFECNTIKVVIHKDDSVTIEDNGRGIPCDVHEK 202
Query: 61 TNKSALETVLTVLHA 75
T KSALETVLTVLH+
Sbjct: 203 TKKSALETVLTVLHS 217
Score = 193 (73.0 bits), Expect = 5.3e-112, Sum P(5) = 5.3e-112
Identities = 43/95 (45%), Positives = 56/95 (58%)
Query: 432 RGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHI 491
+GK N ++K + + E QN L K + LRY K+II+TDADVDG HI
Sbjct: 745 KGK--NSKKKSDLKNSRFESTQNNNNILNK--KKDILVDNTLRYGKVIIMTDADVDGEHI 800
Query: 492 RTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGK 526
R LLLTF YR+QK + + G +YV PPLYK+ K
Sbjct: 801 RILLLTFLYRFQKEIIENGNVYVACPPLYKITYNK 835
Score = 149 (57.5 bits), Expect = 5.3e-112, Sum P(5) = 5.3e-112
Identities = 32/64 (50%), Positives = 38/64 (59%)
Query: 550 YSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQ 609
Y IQRFKGLGEMM QLW TT++P R L ++ + DA AN + SLMG RK I
Sbjct: 939 YEIQRFKGLGEMMADQLWNTTMDPTVRKLIRVTVNDAIRANDLIFSLMGEDSKLRKNFIL 998
Query: 610 NAAN 613
N
Sbjct: 999 ENTN 1002
Score = 138 (53.6 bits), Expect = 5.3e-112, Sum P(5) = 5.3e-112
Identities = 32/98 (32%), Positives = 55/98 (56%)
Query: 101 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 160
NALS ++V V+R+ Y + +GK LT P++ ++GT+I + PD +F ++
Sbjct: 290 NALSSFMKVKVFRNNKIYSIELEKGKVTKELTITNCPIN---KRGTQIHYKPDSSIFKSS 346
Query: 161 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQY 198
+ + + I RI +LA+LN KLT E S+ + + Y
Sbjct: 347 TKHNSDLIKNRIHQLAYLNEKLTFYFYDERSENKNSIY 384
Score = 38 (18.4 bits), Expect = 2.8e-34, Sum P(4) = 2.8e-34
Identities = 9/38 (23%), Positives = 20/38 (52%)
Query: 519 LYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFK 556
+ VE+ K + ++++ELK + ++ N Y + K
Sbjct: 698 ILNVEKIKNNKRIFENSELKSLITALGLNVNYDNKNLK 735
Score = 38 (18.4 bits), Expect = 2.1e-13, Sum P(2) = 2.1e-13
Identities = 10/19 (52%), Positives = 13/19 (68%)
Query: 539 KVKSSFPSNALYSIQRFKG 557
KVK F +N +YSI+ KG
Sbjct: 297 KVKV-FRNNKIYSIELEKG 314
Score = 37 (18.1 bits), Expect = 4.3e-21, Sum P(3) = 4.3e-21
Identities = 28/132 (21%), Positives = 48/132 (36%)
Query: 215 NTDKKPLHDVVGFRKDVDGITIDLALQWCSDA----YSDTMLGYANSIRTIDGGTHIEGV 270
NTD K LH ++ F + +D + C+ + D + ++ R I H +
Sbjct: 147 NTDVKGLHQIL-F-EIIDNSVDEYNNFECNTIKVVIHKDDSVTIEDNGRGIPCDVHEKTK 204
Query: 271 KASLTRTLNSLGKKSKTVKDK-DISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPE 329
K++L L L +K D+ D + G T S + N
Sbjct: 205 KSALETVLTVLHSGAKFFDDEMDDEIDNNMNNTGNTNT-SEKNNRDNISNNNNNNNNNKR 263
Query: 330 VRKVVDQSVQEY 341
+K +S Q+Y
Sbjct: 264 TKKNSKESAQKY 275
>UNIPROTKB|Q8I528 [details] [associations]
symbol:GyrB "Term=DNA gyrase subunit B;evidence=inferred
from direct assay" species:36329 "Plasmodium falciparum 3D7"
[GO:0020011 "apicoplast" evidence=IDA] InterPro:IPR001241
InterPro:IPR002288 InterPro:IPR003594 InterPro:IPR013506
InterPro:IPR013759 InterPro:IPR013760 InterPro:IPR018522
Pfam:PF00204 Pfam:PF00986 Pfam:PF02518 PRINTS:PR00418
PROSITE:PS00177 SMART:SM00387 SMART:SM00433 Pfam:PF01751
InterPro:IPR006171 GO:GO:0005524 GO:GO:0005694 EMBL:AE014188
Gene3D:3.30.565.10 SUPFAM:SSF55874 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0020011
GO:GO:0006265 GO:GO:0003918 SUPFAM:SSF56719 KO:K02470
Gene3D:3.40.50.670 HOGENOM:HOG000075156 GenomeReviews:AE014188_GR
HSSP:P06982 RefSeq:XP_001350789.1 ProteinModelPortal:Q8I528
IntAct:Q8I528 MINT:MINT-1670662 PRIDE:Q8I528
EnsemblProtists:PFL1915w:mRNA GeneID:811435 KEGG:pfa:PFL1915w
EuPathDB:PlasmoDB:PF3D7_1239500 OMA:YDERSEN ProtClustDB:PTZ00109
Uniprot:Q8I528
Length = 1006
Score = 503 (182.1 bits), Expect = 5.3e-112, Sum P(5) = 5.3e-112
Identities = 105/264 (39%), Positives = 166/264 (62%)
Query: 206 GLEEYVQWLNTDKKPL---HD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTI 261
GL EY+ + +K L +D ++ I IDL ++W S+ Y++ ++ + N++ T
Sbjct: 465 GLNEYITNITKNKTNLFKDNDKIISISCYHKNIYIDLRMKWLSNQYNENIISFVNNVNTT 524
Query: 262 DGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQT 321
DGGTH++ +K +++R +N KK++ +K+ +++ GE++REGLT I+SV++ NPEFEGQT
Sbjct: 525 DGGTHVDALKYAVSRCVNYNIKKNEMIKNF-VNIPGEYIREGLTAILSVKMNNPEFEGQT 583
Query: 322 KTRLGNPEVRKVVDQSVQEYLTEYLELHPDVXXXXXXXXXXXXXXXXXXXXXXXXVRQKS 381
KT+LG+ ++ +++ + E L+E + P++ +R K+
Sbjct: 584 KTKLGSHHLKSILESVIFEKLSEIFDFEPNLLSSIYFKALQAKLSDEEAKAARDLIRSKN 643
Query: 382 VLRSSS-LPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVER 440
SS+ LPGKL DC S +EIFIVEGDSA GSAKQ R+R QAILPL+GKILNVE+
Sbjct: 644 NQYSSTILPGKLVDCISDDISRNEIFIVEGDSAAGSAKQARNREIQAILPLKGKILNVEK 703
Query: 441 -KDEAAMYKNEEIQNLIRALGLGV 463
K+ +++N E+++LI ALGL V
Sbjct: 704 IKNNKRIFENSELKSLITALGLNV 727
Score = 221 (82.9 bits), Expect = 5.3e-112, Sum P(5) = 5.3e-112
Identities = 42/75 (56%), Positives = 57/75 (76%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG+T +GLH +++EI+DN+VDE + I+V + D+SV++ DNGRGIP D+H
Sbjct: 143 MYIGNTDVKGLHQILFEIIDNSVDEYNNFECNTIKVVIHKDDSVTIEDNGRGIPCDVHEK 202
Query: 61 TNKSALETVLTVLHA 75
T KSALETVLTVLH+
Sbjct: 203 TKKSALETVLTVLHS 217
Score = 193 (73.0 bits), Expect = 5.3e-112, Sum P(5) = 5.3e-112
Identities = 43/95 (45%), Positives = 56/95 (58%)
Query: 432 RGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHI 491
+GK N ++K + + E QN L K + LRY K+II+TDADVDG HI
Sbjct: 745 KGK--NSKKKSDLKNSRFESTQNNNNILNK--KKDILVDNTLRYGKVIIMTDADVDGEHI 800
Query: 492 RTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGK 526
R LLLTF YR+QK + + G +YV PPLYK+ K
Sbjct: 801 RILLLTFLYRFQKEIIENGNVYVACPPLYKITYNK 835
Score = 149 (57.5 bits), Expect = 5.3e-112, Sum P(5) = 5.3e-112
Identities = 32/64 (50%), Positives = 38/64 (59%)
Query: 550 YSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQ 609
Y IQRFKGLGEMM QLW TT++P R L ++ + DA AN + SLMG RK I
Sbjct: 939 YEIQRFKGLGEMMADQLWNTTMDPTVRKLIRVTVNDAIRANDLIFSLMGEDSKLRKNFIL 998
Query: 610 NAAN 613
N
Sbjct: 999 ENTN 1002
Score = 138 (53.6 bits), Expect = 5.3e-112, Sum P(5) = 5.3e-112
Identities = 32/98 (32%), Positives = 55/98 (56%)
Query: 101 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 160
NALS ++V V+R+ Y + +GK LT P++ ++GT+I + PD +F ++
Sbjct: 290 NALSSFMKVKVFRNNKIYSIELEKGKVTKELTITNCPIN---KRGTQIHYKPDSSIFKSS 346
Query: 161 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQY 198
+ + + I RI +LA+LN KLT E S+ + + Y
Sbjct: 347 TKHNSDLIKNRIHQLAYLNEKLTFYFYDERSENKNSIY 384
Score = 38 (18.4 bits), Expect = 2.8e-34, Sum P(4) = 2.8e-34
Identities = 9/38 (23%), Positives = 20/38 (52%)
Query: 519 LYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFK 556
+ VE+ K + ++++ELK + ++ N Y + K
Sbjct: 698 ILNVEKIKNNKRIFENSELKSLITALGLNVNYDNKNLK 735
Score = 38 (18.4 bits), Expect = 2.1e-13, Sum P(2) = 2.1e-13
Identities = 10/19 (52%), Positives = 13/19 (68%)
Query: 539 KVKSSFPSNALYSIQRFKG 557
KVK F +N +YSI+ KG
Sbjct: 297 KVKV-FRNNKIYSIELEKG 314
Score = 37 (18.1 bits), Expect = 4.3e-21, Sum P(3) = 4.3e-21
Identities = 28/132 (21%), Positives = 48/132 (36%)
Query: 215 NTDKKPLHDVVGFRKDVDGITIDLALQWCSDA----YSDTMLGYANSIRTIDGGTHIEGV 270
NTD K LH ++ F + +D + C+ + D + ++ R I H +
Sbjct: 147 NTDVKGLHQIL-F-EIIDNSVDEYNNFECNTIKVVIHKDDSVTIEDNGRGIPCDVHEKTK 204
Query: 271 KASLTRTLNSLGKKSKTVKDK-DISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPE 329
K++L L L +K D+ D + G T S + N
Sbjct: 205 KSALETVLTVLHSGAKFFDDEMDDEIDNNMNNTGNTNT-SEKNNRDNISNNNNNNNNNKR 263
Query: 330 VRKVVDQSVQEY 341
+K +S Q+Y
Sbjct: 264 TKKNSKESAQKY 275
>UNIPROTKB|O69998 [details] [associations]
symbol:O69998 "Putative DNA gyrase subunit B"
species:100226 "Streptomyces coelicolor A3(2)" [GO:0003918 "DNA
topoisomerase type II (ATP-hydrolyzing) activity" evidence=IBA]
[GO:0006261 "DNA-dependent DNA replication" evidence=IBA]
[GO:0006265 "DNA topological change" evidence=IBA] [GO:0007059
"chromosome segregation" evidence=IBA] [GO:0009295 "nucleoid"
evidence=IBA] InterPro:IPR001241 InterPro:IPR002288
InterPro:IPR003594 InterPro:IPR013506 InterPro:IPR013759
InterPro:IPR013760 InterPro:IPR018522 Pfam:PF00204 Pfam:PF00986
Pfam:PF02518 PRINTS:PR00418 PROSITE:PS00177 SMART:SM00387
SMART:SM00433 Pfam:PF01751 InterPro:IPR006171 GO:GO:0005524
GO:GO:0005694 GO:GO:0007059 GO:GO:0006261 GenomeReviews:AL645882_GR
Gene3D:3.30.565.10 SUPFAM:SSF55874 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0009295
GO:GO:0006265 GO:GO:0003918 SUPFAM:SSF56719 KO:K02470
Gene3D:3.40.50.670 HOGENOM:HOG000075154 ProtClustDB:PRK05559
HSSP:P06982 EMBL:AL939125 PIR:T35196 RefSeq:NP_629945.1
ProteinModelPortal:O69998 GeneID:1101264 KEGG:sco:SCO5822
PATRIC:23741544 OMA:DSEMIIS Uniprot:O69998
Length = 707
Score = 704 (252.9 bits), Expect = 2.8e-103, Sum P(2) = 2.8e-103
Identities = 159/399 (39%), Positives = 229/399 (57%)
Query: 236 IDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISL 295
+D+AL+W Y T+ + N I T GGTH+ G + ++ +T+N + + K ++ + +
Sbjct: 310 VDVALRW-GTGYDTTVRSFVNIIATPKGGTHVAGFEQAVAKTMNEVLRTKKMLRVAEDDI 368
Query: 296 SGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYL-ELHPDVXX 354
+ EGLT +++VR+ P+FEGQTK LG R++V+ + L +L D
Sbjct: 369 VKDDALEGLTAVVTVRLAEPQFEGQTKEVLGTSAARRIVNNVISRELKAFLTSTKRDAAQ 428
Query: 355 XXXXXXXXXXXXXXXXXXXXX---XVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGD 411
R+K+ L SSSLP KLADC S + SE+FIVEGD
Sbjct: 429 QARVVMEKAVAAARTRIAARQHKDAQRRKTALESSSLPAKLADCRSDDVDRSELFIVEGD 488
Query: 412 SAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKE 471
SA G+AK R+ FQA+LP+RGKILNV++ M KN E +I+ +G G G F +
Sbjct: 489 SALGTAKLARNSEFQALLPIRGKILNVQKSSVTDMLKNAECGAIIQVIGAG-SGRTFDID 547
Query: 472 ALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVE--RGKQVQ 529
A RY KII++TDADVDG+HIRTLLLT F+RY + + + G ++ VPPL+++E + K+ Q
Sbjct: 548 AARYGKIIMMTDADVDGSHIRTLLLTLFHRYMRPMVEAGRVFAAVPPLHRIELVQPKKGQ 607
Query: 530 ----YCYDDAELKKVKSSFPS-NALY--SIQRFKGLGEMMPVQLWETTLNPEQRMLKQLV 582
Y Y D EL+ F S N Y SIQR+KGLGEM QL ETT++P +R L+++
Sbjct: 608 DKYVYTYSDRELRDKLMEFQSKNIRYKDSIQRYKGLGEMDADQLAETTMDPRRRTLRRIN 667
Query: 583 IEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLDHLD 621
+ D A VF LMG V RKE I ++A ++ +D
Sbjct: 668 LTDLDSAEQVFDLLMGNDVAPRKEFISSSAATLDRSRID 706
Score = 339 (124.4 bits), Expect = 2.8e-103, Sum P(2) = 2.8e-103
Identities = 89/241 (36%), Positives = 121/241 (50%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGL H ++EI+DN+VDEA GY +IEV L D SV V DNGRGIP+D+ P
Sbjct: 43 MYIGSTDSRGLMHCLWEIIDNSVDEALGGYCDHIEVILHDDASVEVRDNGRGIPVDVEPK 102
Query: 61 TNKSALETVLTVLHAXXXXXXXXXXXXXXXXXXXXXXXXXNALSESLEVTVWRDGMEYHQ 120
T S +E V+T LHA NALS L++ V G +
Sbjct: 103 TGLSGVEVVMTKLHAGGKFGGGAYAASGGLHGVGASVV--NALSARLDIEVDLGGHTHAI 160
Query: 121 KYSRGKPVTTLTCH----------VLPVDS--KDRQGTRIRFWPDKQVFTTAIQFDHNTI 168
+ RG P T + V K R+GTR+R+W D+Q+F + + +
Sbjct: 161 SFRRGVPGTFAKAGPDAKFEAGSGLRKVKKVPKSRRGTRVRYWADRQIFLKDAKLSLDNL 220
Query: 169 AGRIRELAFLNPKLTIALRKEDS--DPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVG 226
R R+ AFL P LTI +R E D + F GG+ E+ ++L D+ P+ DV+
Sbjct: 221 HQRARQTAFLVPGLTIVVRDEFGLGDGGSKGEESFRFDGGISEFCEFLAGDR-PVCDVLR 279
Query: 227 F 227
F
Sbjct: 280 F 280
>UNIPROTKB|Q89M38 [details] [associations]
symbol:gyrB "DNA gyrase subunit B" species:224911
"Bradyrhizobium japonicum USDA 110" [GO:0003918 "DNA topoisomerase
type II (ATP-hydrolyzing) activity" evidence=IBA] [GO:0006261
"DNA-dependent DNA replication" evidence=IBA] [GO:0006265 "DNA
topological change" evidence=IBA] [GO:0007059 "chromosome
segregation" evidence=IBA] [GO:0009295 "nucleoid" evidence=IBA]
InterPro:IPR001241 InterPro:IPR002288 InterPro:IPR003594
InterPro:IPR005737 InterPro:IPR013506 InterPro:IPR013759
InterPro:IPR013760 InterPro:IPR018522 Pfam:PF00204 Pfam:PF00986
Pfam:PF02518 PRINTS:PR00418 PROSITE:PS00177 SMART:SM00387
SMART:SM00433 Pfam:PF01751 InterPro:IPR006171 GO:GO:0005524
GO:GO:0005694 GO:GO:0007059 GO:GO:0006261 Gene3D:3.30.565.10
SUPFAM:SSF55874 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0009295 GO:GO:0006265
EMBL:BA000040 GenomeReviews:BA000040_GR GO:GO:0003918
SUPFAM:SSF56719 Gene3D:3.40.50.670 HOGENOM:HOG000075154 KO:K02622
ProtClustDB:PRK05559 OMA:GFIQSYC TIGRFAMs:TIGR01055 HSSP:P06982
RefSeq:NP_770995.1 ProteinModelPortal:Q89M38 GeneID:1052126
KEGG:bja:bll4355 PATRIC:21192268
BioCyc:BJAP224911:GJEJ-4381-MONOMER Uniprot:Q89M38
Length = 681
Score = 997 (356.0 bits), Expect = 1.7e-100, P = 1.7e-100
Identities = 244/637 (38%), Positives = 348/637 (54%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG T + LHHL E++DN++DEA AG+A+ I V L AD ++V DNGRGIPID HP
Sbjct: 58 MYIGGTDEKALHHLFAEVIDNSMDEALAGHATFIGVELSADGFLTVTDNGRGIPIDPHPK 117
Query: 61 -TNKSALETVLTVLHAXXXXXXXXXXXXXXXXXXXXXXXXXNALSESLEVTVWRDGMEYH 119
KSALE ++ LH+ NALS LEV V R Y
Sbjct: 118 FPKKSALEVIMCTLHSGGKFDSKVYETSGGLHGVGISVV--NALSSLLEVEVARSQKLYR 175
Query: 120 QKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLN 179
+ RG P L + +++ R+GTR+RF PD +F F + R A+L
Sbjct: 176 MTFERGHPKGKLE-DLGKINN--RRGTRVRFKPDTDIFGAKAAFKPQRLFKMTRSKAYLF 232
Query: 180 PKLTIA-------LRKEDSDPEKNQYNEYFFAGGLEEYVQW-LNTDKKPLHDVVGFRKDV 231
+ I L+ D P + ++ F GGL++Y+ ++ D D+ +
Sbjct: 233 GGVEIRWNCAPELLKGIDDVPAEATFH---FPGGLKDYLAAAIHADTLVHPDIFSGKSGR 289
Query: 232 DGI--TIDLALQWCSDAYSDTMLG-YANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTV 288
+G + A+ W +DA D L Y N++ T DGGTH G++++L R L ++
Sbjct: 290 NGAHGACEWAVAWTADA--DGFLSSYTNTVPTPDGGTHESGLRSALLRGLKDHAERVGQG 347
Query: 289 KDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLEL 348
K + S++ E V G ++SV V PEF+GQTK RL E +++V+Q++++ +L
Sbjct: 348 K-RASSITSEDVMVGAAVMLSVFVREPEFQGQTKDRLATAEAQRIVEQAMKDPFDHWLSG 406
Query: 349 HPDVXXXXXXXXXXXXXXXXXXXXXXXXVRQKSVLRSSSLPGKLADCSSTTPEESEIFIV 408
+P+ R K+ + LPGKLADCS E SE+FIV
Sbjct: 407 NPNQANKLLDFVIDRAEERLRRRQEKETAR-KTAGKKLRLPGKLADCSDAGTEGSELFIV 465
Query: 409 EGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDF 468
EGDSAGGSAKQ RDR+ QA+LPLRGKILNV + + N ++ +L++A+G G + +
Sbjct: 466 EGDSAGGSAKQARDRKTQAVLPLRGKILNVASAGKDKLTANAQLSDLVQAIGCGTLAQ-Y 524
Query: 469 KKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQV 528
++E LRY +III+TDADVDGAHI +LL+TFFYR L DEG +++ VPPLYK+ G +
Sbjct: 525 REEDLRYQRIIIMTDADVDGAHIASLLITFFYRQMPRLIDEGHLFLAVPPLYKLTHGSKS 584
Query: 529 QYCYDDAELKK-VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQR-MLKQLVIEDA 586
Y DDA + +KS F +NA + RFKGLGEMMP QL ETT++P +R MLK +++ D
Sbjct: 585 VYARDDAHKEALIKSEFNANAKVEVNRFKGLGEMMPAQLKETTMDPAKRTMLKVVLLADD 644
Query: 587 AEANV-VFSSLMGARVDTRKELIQNAANLVNLDHLDI 622
+ LMG + + R I + A N D LD+
Sbjct: 645 RDTTADSVERLMGTKAEARFAFISDKAEFANEDLLDV 681
>TIGR_CMR|SPO_1253 [details] [associations]
symbol:SPO_1253 "DNA topoisomerase IV, B subunit"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0003918 "DNA
topoisomerase type II (ATP-hydrolyzing) activity" evidence=ISS]
[GO:0006265 "DNA topological change" evidence=ISS] [GO:0009340 "DNA
topoisomerase IV complex" evidence=ISS] InterPro:IPR001241
InterPro:IPR002288 InterPro:IPR003594 InterPro:IPR005737
InterPro:IPR013506 InterPro:IPR013759 InterPro:IPR013760
InterPro:IPR018522 Pfam:PF00204 Pfam:PF00986 Pfam:PF02518
PRINTS:PR00418 PROSITE:PS00177 SMART:SM00387 SMART:SM00433
Pfam:PF01751 InterPro:IPR006171 GO:GO:0005524 GO:GO:0005694
EMBL:CP000031 GenomeReviews:CP000031_GR Gene3D:3.30.565.10
SUPFAM:SSF55874 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0006265 GO:GO:0003918
SUPFAM:SSF56719 Gene3D:3.40.50.670 HOGENOM:HOG000075154 KO:K02622
ProtClustDB:PRK05559 OMA:GFIQSYC TIGRFAMs:TIGR01055
RefSeq:YP_166498.1 ProteinModelPortal:Q5LU07 GeneID:3192730
KEGG:sil:SPO1253 PATRIC:23375809 Uniprot:Q5LU07
Length = 652
Score = 920 (328.9 bits), Expect = 2.4e-92, P = 2.4e-92
Identities = 227/634 (35%), Positives = 341/634 (53%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG T R LHH+V E+LDN++DEA AG+A+ IEV L AD +++V DNGRGIP+D HP
Sbjct: 34 MYIGGTDERALHHMVAEVLDNSMDEAVAGFANRIEVELHADYALTVRDNGRGIPVDPHPK 93
Query: 61 -TNKSALETVLTVLHAXXXXXXXXXXXXXXXXXXXXXXXXXNALSESLEVTVWRDGMEYH 119
KSALE +L LHA NALS+S+ V V RD + Y
Sbjct: 94 FPGKSALEVILCTLHAGGKFSGKAYQTSGGLHGVGASVV--NALSDSMVVQVARDKLLYE 151
Query: 120 QKYSRGKPVTTLT-CHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFL 178
Q++SRG P+ + P +R+GT + F D+++F +F + IR A+L
Sbjct: 152 QRFSRGLPLGPIQQIGAAP----NRRGTTVTFHADEEIFGHH-RFKPARLFKSIRSKAYL 206
Query: 179 NPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWL----NT-DKKPLHDVVGFRK--DV 231
+ I + D E + F GGL +Y++ +T ++P V F + +
Sbjct: 207 FSGVEIRWKSAIDDGETPTEATFHFPGGLADYLKETLGKASTYAEQPFAGTVDFTEKFNT 266
Query: 232 DGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDK 291
G ++ A+ W + + + Y N++ T +GGTH G +++ + + + G+ K
Sbjct: 267 PG-KVEWAINW-TPSRDGFIQSYCNTVPTPEGGTHEAGFWSAILKGIRAYGELISNKKAA 324
Query: 292 DISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPD 351
I+ + + G ++S + PEF GQTK RL E +++V+ +V+++ +L
Sbjct: 325 QITR--DDLLTGGCALVSCFIREPEFVGQTKDRLATVEAQRLVEGAVRDHFDNWLAADTK 382
Query: 352 VXXXXXXXXXXXXXXXXXXXXXXXXVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGD 411
++K+ + LPGKL DCS+T+ E +E+FIVEGD
Sbjct: 383 -SAGAILDFLVLRAEERIRRRQEKETQRKTATKKLRLPGKLVDCSATSREGTELFIVEGD 441
Query: 412 SAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKE 471
SAGGSAK RDR+ QA+LPLRGKILNV + + N+EI +L +ALG+G+ G F +
Sbjct: 442 SAGGSAKMARDRKTQALLPLRGKILNVLGAASSKLGSNQEISDLTQALGVGL-GTRFNVD 500
Query: 472 ALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYC 531
LRY KIII+TDADVDGAHI LL+TFF+ + + D G +Y+ PPLY++ +G + YC
Sbjct: 501 DLRYDKIIIMTDADVDGAHIAALLMTFFFTQMRPMIDTGHLYLACPPLYRLTQGAKRVYC 560
Query: 532 YDDAELKK-VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIED--AAE 588
D+AE + + + RFKGLGEM L +TT+NPE R L ++ I++ E
Sbjct: 561 LDEAERDEWLAKGLGGKGKIDVSRFKGLGEMDAKDLKDTTMNPETRKLIRVTIDEDEPGE 620
Query: 589 ANVVFSSLMGARVDTRKELIQNAANLVNLDHLDI 622
+ LMG + + R + IQ A V + LD+
Sbjct: 621 TGDLVERLMGKKPELRFQYIQENARFV--EELDV 652
>TIGR_CMR|SO_3899 [details] [associations]
symbol:SO_3899 "DNA topoisomerase IV, B subunit"
species:211586 "Shewanella oneidensis MR-1" [GO:0003918 "DNA
topoisomerase type II (ATP-hydrolyzing) activity" evidence=ISS]
[GO:0006265 "DNA topological change" evidence=ISS] [GO:0009340 "DNA
topoisomerase IV complex" evidence=ISS] InterPro:IPR001241
InterPro:IPR002288 InterPro:IPR003594 InterPro:IPR005737
InterPro:IPR013506 InterPro:IPR013759 InterPro:IPR013760
InterPro:IPR018522 Pfam:PF00204 Pfam:PF00986 Pfam:PF02518
PRINTS:PR00418 PROSITE:PS00177 SMART:SM00387 SMART:SM00433
Pfam:PF01751 InterPro:IPR006171 GO:GO:0005524 GO:GO:0005694
EMBL:AE014299 GenomeReviews:AE014299_GR Gene3D:3.30.565.10
SUPFAM:SSF55874 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0006265 GO:GO:0003918
SUPFAM:SSF56719 Gene3D:3.40.50.670 HOGENOM:HOG000075154 KO:K02622
ProtClustDB:PRK05559 TIGRFAMs:TIGR01055 HSSP:P06982 OMA:QARDKEF
RefSeq:NP_719430.1 ProteinModelPortal:Q8EAK3 SMR:Q8EAK3
GeneID:1171539 KEGG:son:SO_3899 PATRIC:23527480 Uniprot:Q8EAK3
Length = 628
Score = 886 (316.9 bits), Expect = 9.6e-89, P = 9.6e-89
Identities = 217/624 (34%), Positives = 321/624 (51%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MY +T P +HL E++DN+VDEA AG+A+ IEV L DNS+ V D+GRG+P+D+HP
Sbjct: 25 MYTDTTRP---NHLGQEVIDNSVDEALAGHATKIEVVLHTDNSLEVTDDGRGMPVDIHPE 81
Query: 61 TNKSALETVLTVLHAXXXXXXXXXXXXXXXXXXXXXXXXXNALSESLEVTVWRDGMEYHQ 120
+E +LT LHA NALS +EVTV RDG Y
Sbjct: 82 EGIPGVELILTKLHAGGKFSNKNYQFSGGLHGVGISVV--NALSRRVEVTVRRDGQVYDI 139
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+ G V L V + GTR+ FWPD F + F ++ + +R A L P
Sbjct: 140 AFENGFKVEELK--VTGTCGRRNTGTRVHFWPDTSYFDSP-NFSNSKLIYLLRAKAVLCP 196
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDK--KPLHDVVG-FRKDVDGITID 237
L I + + N+ +E+++ GL +Y++ D P +G F+ ++ D
Sbjct: 197 GLRIKFTNKHT----NEVHEWYYESGLTDYLKAAVGDNIMLPEEPFIGSFKGQIEAA--D 250
Query: 238 LALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSG 297
A+ W + Y N I T GGTH+ G + L ++ + + + I LS
Sbjct: 251 WAITWLPEGGESINESYVNLIPTPLGGTHVNGFRQGLLESMREFCEFRNLIP-RGIKLSP 309
Query: 298 EHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVXXXXX 357
E + + I+SV++ +P+F GQTK +L + + V V++ + +L + ++
Sbjct: 310 EDIWDRAAFILSVKMQDPQFAGQTKEKLSSRQSSAFVSGIVRDAFSLWLNSNTELAESLA 369
Query: 358 XXXXXXXXXXXXXXXXXXXVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSA 417
V +K V +LPGKL DCS P E+F+VEGDSAGGSA
Sbjct: 370 EMCINNAQKRLKAAKK---VARKKVTSGPALPGKLTDCSGQDPMRGELFLVEGDSAGGSA 426
Query: 418 KQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHK 477
KQ RDR FQAI+PLRGKILN D + + ++E+ ++ A+G D + LRY K
Sbjct: 427 KQARDREFQAIMPLRGKILNTWEVDASQVLASQEVHDISVAIGCDPDSNDISE--LRYGK 484
Query: 478 IIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAEL 537
I IL DAD DG HI TLL F ++ + L ++G +Y+ +PPL++++ GK V Y DDAE
Sbjct: 485 ICILADADSDGLHIATLLCALFLKHYRVLVEQGHVYIAMPPLFRIDIGKDVYYALDDAEK 544
Query: 538 KKVKSSFPS-NALYSIQ--RFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFS 594
+ V + N +Q RFKGLGEM P+QL ETT++P R L QL I+DA E + +
Sbjct: 545 EGVLDRINAENKKGKVQVTRFKGLGEMNPLQLRETTMDPNTRRLVQLTIDDAEETDSLMD 604
Query: 595 SLMGA-RVDTRKELIQNAANLVNL 617
L+ R RK +++ ++ L
Sbjct: 605 MLLAKKRSPDRKNWLEDKGDMAVL 628
>UNIPROTKB|A6VD80 [details] [associations]
symbol:parE "DNA topoisomerase IV, B subunit"
species:381754 "Pseudomonas aeruginosa PA7" [GO:0003918 "DNA
topoisomerase type II (ATP-hydrolyzing) activity" evidence=IBA]
[GO:0006261 "DNA-dependent DNA replication" evidence=IBA]
[GO:0006265 "DNA topological change" evidence=IBA] [GO:0007059
"chromosome segregation" evidence=IBA] [GO:0009295 "nucleoid"
evidence=IBA] InterPro:IPR001241 InterPro:IPR002288
InterPro:IPR003594 InterPro:IPR005737 InterPro:IPR013506
InterPro:IPR013759 InterPro:IPR013760 InterPro:IPR018522
Pfam:PF00204 Pfam:PF00986 Pfam:PF02518 PRINTS:PR00418
PROSITE:PS00177 SMART:SM00387 SMART:SM00433 Pfam:PF01751
InterPro:IPR006171 GO:GO:0005524 GO:GO:0005694 GO:GO:0007059
GO:GO:0006261 EMBL:CP000744 GenomeReviews:CP000744_GR
Gene3D:3.30.565.10 SUPFAM:SSF55874 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0009295
GO:GO:0006265 GO:GO:0003918 SUPFAM:SSF56719 eggNOG:COG0187
Gene3D:3.40.50.670 HOGENOM:HOG000075154 KO:K02622
ProtClustDB:PRK05559 TIGRFAMs:TIGR01055 RefSeq:YP_001351015.1
ProteinModelPortal:A6VD80 SMR:A6VD80 STRING:A6VD80 GeneID:5355906
KEGG:pap:PSPA7_5696 PATRIC:19832877 OMA:QARDKEF
BioCyc:PAER381754:GHMY-5702-MONOMER Uniprot:A6VD80
Length = 629
Score = 879 (314.5 bits), Expect = 5.3e-88, P = 5.3e-88
Identities = 211/624 (33%), Positives = 319/624 (51%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MY +T P +HL E++DN+VDEA AG+A +++V L DNS+ V D+GRG+P+D+HP
Sbjct: 24 MYTDTTRP---NHLAQEVIDNSVDEALAGHAKSVQVILHQDNSLEVIDDGRGMPVDIHPE 80
Query: 61 TNKSALETVLTVLHAXXXXXXXXXXXXXXXXXXXXXXXXXNALSESLEVTVWRDGMEYHQ 120
+E +LT LHA NALS +EV V RD EY
Sbjct: 81 EGVPGVELILTKLHAGGKFSNKNYQFSGGLHGVGISVV--NALSTRVEVRVKRDANEYRM 138
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
++ G T L V+ + GT + FWPD + F +A +F + + ++ A L P
Sbjct: 139 TFADGFKDTDL--EVIGTVGRRNTGTSVHFWPDPKYFDSA-KFSVSRLKHVLKAKAVLCP 195
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGI--TIDL 238
L++ D + E+ F GL Y+ + L D F +++G +
Sbjct: 196 GLSVVFE----DKNTGERVEWHFEDGLRSYLTDAVAELPRLPDEP-FCGNLEGSKEAVSW 250
Query: 239 ALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGE 298
AL W + Y N I T GGTH+ G++ L + + + + + + L+ E
Sbjct: 251 ALLWLPEGGESVQESYVNLIPTAQGGTHVNGLRQGLLDAMREFCE-FRNLLPRGVKLAPE 309
Query: 299 HVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVXXXXXX 358
V E + ++S+++ P+F GQTK RL + E V V++ + +L H ++
Sbjct: 310 DVWERIAFVLSMKMQEPQFSGQTKERLSSREAAAFVSGVVKDAFSLWLNEHAEIGLQLAE 369
Query: 359 XXXXXXXXXXXXXXXXXXVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAK 418
V +K + + +LPGKLADC+ P +E+F+VEGDSAGGSAK
Sbjct: 370 LAISNAGRRLKAGKK---VERKKITQGPALPGKLADCAGQEPMRAELFLVEGDSAGGSAK 426
Query: 419 QGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKI 478
Q RD+ FQAI+PLRGKILN D + ++E+ ++ A+G+ D + LRY KI
Sbjct: 427 QARDKEFQAIMPLRGKILNTWEVDGGEVLASQEVHDIAVAIGVDPGASDLAQ--LRYGKI 484
Query: 479 IILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAE-- 536
IL DAD DG HI TLL F R+ + L + G +YV +PPLY+++ GK + Y D+AE
Sbjct: 485 CILADADSDGLHIATLLCALFVRHFRPLVEAGHVYVAMPPLYRIDLGKDIYYALDEAERD 544
Query: 537 --LKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFS 594
L+++ + + RFKGLGEM P+QL ETT++P R L QL +EDA +
Sbjct: 545 GILERLAAE-KKRGKPQVTRFKGLGEMNPLQLRETTMDPNTRRLVQLTLEDATGTLEIMD 603
Query: 595 SLMGA-RVDTRKELIQNAANLVNL 617
L+ R RK +++ NL +
Sbjct: 604 MLLAKKRAGDRKSWLESKGNLAEV 627
>UNIPROTKB|Q9KPD9 [details] [associations]
symbol:VC_2431 "Topoisomerase IV, subunit B" species:243277
"Vibrio cholerae O1 biovar El Tor str. N16961" [GO:0003918 "DNA
topoisomerase type II (ATP-hydrolyzing) activity" evidence=ISS]
[GO:0006260 "DNA replication" evidence=ISS] [GO:0006265 "DNA
topological change" evidence=ISS] [GO:0007059 "chromosome
segregation" evidence=ISS] [GO:0009340 "DNA topoisomerase IV
complex" evidence=ISS] InterPro:IPR001241 InterPro:IPR002288
InterPro:IPR003594 InterPro:IPR005737 InterPro:IPR013506
InterPro:IPR013759 InterPro:IPR013760 InterPro:IPR018522
Pfam:PF00204 Pfam:PF00986 Pfam:PF02518 PRINTS:PR00418
PROSITE:PS00177 SMART:SM00387 SMART:SM00433 Pfam:PF01751
InterPro:IPR006171 GO:GO:0005524 GO:GO:0005694 GO:GO:0007059
GO:GO:0006260 EMBL:AE003852 GenomeReviews:AE003852_GR
Gene3D:3.30.565.10 SUPFAM:SSF55874 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0006265
GO:GO:0003918 SUPFAM:SSF56719 Gene3D:3.40.50.670 KO:K02622
ProtClustDB:PRK05559 TIGRFAMs:TIGR01055 HSSP:P06982 OMA:GNVCVAR
PIR:G82078 RefSeq:NP_232061.1 ProteinModelPortal:Q9KPD9 SMR:Q9KPD9
DNASU:2612973 GeneID:2612973 KEGG:vch:VC2431 PATRIC:20083881
GO:GO:0009340 Uniprot:Q9KPD9
Length = 626
Score = 877 (313.8 bits), Expect = 8.6e-88, P = 8.6e-88
Identities = 216/622 (34%), Positives = 316/622 (50%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MY +T P +HL E++DN+VDEA AGYAS I+V L AD S+ V D+GRG+P+D+HP
Sbjct: 25 MYTDTTRP---NHLGQEVIDNSVDEALAGYASKIQVILHADQSLEVIDDGRGMPVDIHPE 81
Query: 61 TNKSALETVLTVLHAXXXXXXXXXXXXXXXXXXXXXXXXXNALSESLEVTVWRDGMEYHQ 120
S +E +L LHA NALS+ +EV V RDG Y
Sbjct: 82 EKVSGVELILCKLHAGGKFSNKNYQFSGGLHGVGISVV--NALSKRVEVAVRRDGQVYEI 139
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+ G VT LT V + GT + FWPD + F + F + + +R A L P
Sbjct: 140 AFEHGDKVTELT--VTGTCGRRNTGTSVHFWPDTKYFDSP-NFSVSRLINNLRAKAVLCP 196
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQW--LNTDKKPLHDVVG-FRKDVDGITID 237
L I +D N + + + GL++Y+ P G F + T
Sbjct: 197 GLEIIF----TDKVNNNEHRWLYEDGLKDYLAEGVKGYTLLPEEPFTGEFTAQTEAAT-- 250
Query: 238 LALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSG 297
A+ W + Y N I T GGTH+ G++ L + + + + + + L+G
Sbjct: 251 WAVIWLPEGGELITESYVNLIPTAQGGTHVNGLRQGLLDAMREFCE-FRNLLPRGVKLTG 309
Query: 298 EHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVXXXXX 357
E V + ++S+++ +P+F GQTK RL + + V V++ + +L P +
Sbjct: 310 EDVFDRCAYVLSIKMQDPQFAGQTKERLSSRQSAAFVSGVVKDAFSLWLNEKPQLAEQLA 369
Query: 358 XXXXXXXXXXXXXXXXXXXVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSA 417
VR+K + +LPGKL DC+ +E+F+VEGDSAGGSA
Sbjct: 370 EVCIANAHSRMRASKKV--VRKK-IASGPALPGKLTDCTVQDLNRTELFLVEGDSAGGSA 426
Query: 418 KQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHK 477
KQ RDR FQA++PLRGKILN + ++E+ ++ ALG+ ++ EALRY K
Sbjct: 427 KQARDREFQAVMPLRGKILNTWEVSADQVLASQEVHDISVALGIDPDSDNL--EALRYGK 484
Query: 478 IIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAEL 537
+ IL DAD DG HI TLL F R+ + L G +YV +PPLY+++ GK+V Y DD E
Sbjct: 485 VCILADADSDGLHIATLLCALFTRHFRALVKAGHVYVAMPPLYRIDCGKEVFYALDDQEK 544
Query: 538 KKVKSSFPSN-ALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSL 596
+ V A ++QRFKGLGEM P+QL ETT++P R L QL I+DA + + L
Sbjct: 545 EGVLERLSQKKAKVNVQRFKGLGEMNPLQLRETTMDPNTRRLVQLTIDDAEATDEMMDML 604
Query: 597 MGA-RVDTRKELIQNAANLVNL 617
+G R D R+ +Q ++ +
Sbjct: 605 LGKKRADDRRAWLQRNGDMAEV 626
>TIGR_CMR|VC_2431 [details] [associations]
symbol:VC_2431 "topoisomerase IV, subunit B" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0003918 "DNA topoisomerase
type II (ATP-hydrolyzing) activity" evidence=ISS] [GO:0006260 "DNA
replication" evidence=ISS] [GO:0006265 "DNA topological change"
evidence=ISS] [GO:0007059 "chromosome segregation" evidence=ISS]
[GO:0009340 "DNA topoisomerase IV complex" evidence=ISS]
InterPro:IPR001241 InterPro:IPR002288 InterPro:IPR003594
InterPro:IPR005737 InterPro:IPR013506 InterPro:IPR013759
InterPro:IPR013760 InterPro:IPR018522 Pfam:PF00204 Pfam:PF00986
Pfam:PF02518 PRINTS:PR00418 PROSITE:PS00177 SMART:SM00387
SMART:SM00433 Pfam:PF01751 InterPro:IPR006171 GO:GO:0005524
GO:GO:0005694 GO:GO:0007059 GO:GO:0006260 EMBL:AE003852
GenomeReviews:AE003852_GR Gene3D:3.30.565.10 SUPFAM:SSF55874
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 GO:GO:0006265 GO:GO:0003918 SUPFAM:SSF56719
Gene3D:3.40.50.670 KO:K02622 ProtClustDB:PRK05559
TIGRFAMs:TIGR01055 HSSP:P06982 OMA:GNVCVAR PIR:G82078
RefSeq:NP_232061.1 ProteinModelPortal:Q9KPD9 SMR:Q9KPD9
DNASU:2612973 GeneID:2612973 KEGG:vch:VC2431 PATRIC:20083881
GO:GO:0009340 Uniprot:Q9KPD9
Length = 626
Score = 877 (313.8 bits), Expect = 8.6e-88, P = 8.6e-88
Identities = 216/622 (34%), Positives = 316/622 (50%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MY +T P +HL E++DN+VDEA AGYAS I+V L AD S+ V D+GRG+P+D+HP
Sbjct: 25 MYTDTTRP---NHLGQEVIDNSVDEALAGYASKIQVILHADQSLEVIDDGRGMPVDIHPE 81
Query: 61 TNKSALETVLTVLHAXXXXXXXXXXXXXXXXXXXXXXXXXNALSESLEVTVWRDGMEYHQ 120
S +E +L LHA NALS+ +EV V RDG Y
Sbjct: 82 EKVSGVELILCKLHAGGKFSNKNYQFSGGLHGVGISVV--NALSKRVEVAVRRDGQVYEI 139
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+ G VT LT V + GT + FWPD + F + F + + +R A L P
Sbjct: 140 AFEHGDKVTELT--VTGTCGRRNTGTSVHFWPDTKYFDSP-NFSVSRLINNLRAKAVLCP 196
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQW--LNTDKKPLHDVVG-FRKDVDGITID 237
L I +D N + + + GL++Y+ P G F + T
Sbjct: 197 GLEIIF----TDKVNNNEHRWLYEDGLKDYLAEGVKGYTLLPEEPFTGEFTAQTEAAT-- 250
Query: 238 LALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSG 297
A+ W + Y N I T GGTH+ G++ L + + + + + + L+G
Sbjct: 251 WAVIWLPEGGELITESYVNLIPTAQGGTHVNGLRQGLLDAMREFCE-FRNLLPRGVKLTG 309
Query: 298 EHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVXXXXX 357
E V + ++S+++ +P+F GQTK RL + + V V++ + +L P +
Sbjct: 310 EDVFDRCAYVLSIKMQDPQFAGQTKERLSSRQSAAFVSGVVKDAFSLWLNEKPQLAEQLA 369
Query: 358 XXXXXXXXXXXXXXXXXXXVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSA 417
VR+K + +LPGKL DC+ +E+F+VEGDSAGGSA
Sbjct: 370 EVCIANAHSRMRASKKV--VRKK-IASGPALPGKLTDCTVQDLNRTELFLVEGDSAGGSA 426
Query: 418 KQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHK 477
KQ RDR FQA++PLRGKILN + ++E+ ++ ALG+ ++ EALRY K
Sbjct: 427 KQARDREFQAVMPLRGKILNTWEVSADQVLASQEVHDISVALGIDPDSDNL--EALRYGK 484
Query: 478 IIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAEL 537
+ IL DAD DG HI TLL F R+ + L G +YV +PPLY+++ GK+V Y DD E
Sbjct: 485 VCILADADSDGLHIATLLCALFTRHFRALVKAGHVYVAMPPLYRIDCGKEVFYALDDQEK 544
Query: 538 KKVKSSFPSN-ALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSL 596
+ V A ++QRFKGLGEM P+QL ETT++P R L QL I+DA + + L
Sbjct: 545 EGVLERLSQKKAKVNVQRFKGLGEMNPLQLRETTMDPNTRRLVQLTIDDAEATDEMMDML 604
Query: 597 MGA-RVDTRKELIQNAANLVNL 617
+G R D R+ +Q ++ +
Sbjct: 605 LGKKRADDRRAWLQRNGDMAEV 626
>TIGR_CMR|CBU_0064 [details] [associations]
symbol:CBU_0064 "DNA topoisomerase IV, B subunit"
species:227377 "Coxiella burnetii RSA 493" [GO:0003918 "DNA
topoisomerase type II (ATP-hydrolyzing) activity" evidence=ISS]
[GO:0006265 "DNA topological change" evidence=ISS] [GO:0009340 "DNA
topoisomerase IV complex" evidence=ISS] InterPro:IPR001241
InterPro:IPR002288 InterPro:IPR003594 InterPro:IPR005737
InterPro:IPR013506 InterPro:IPR013759 InterPro:IPR013760
InterPro:IPR018522 Pfam:PF00204 Pfam:PF00986 Pfam:PF02518
PRINTS:PR00418 PROSITE:PS00177 SMART:SM00387 SMART:SM00433
Pfam:PF01751 InterPro:IPR006171 GO:GO:0005524 GO:GO:0005694
EMBL:AE016828 GenomeReviews:AE016828_GR Gene3D:3.30.565.10
SUPFAM:SSF55874 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0006265 GO:GO:0003918
SUPFAM:SSF56719 Gene3D:3.40.50.670 HOGENOM:HOG000075154 KO:K02622
ProtClustDB:PRK05559 TIGRFAMs:TIGR01055 RefSeq:NP_819117.2
ProteinModelPortal:Q83F84 PRIDE:Q83F84 GeneID:1207934
KEGG:cbu:CBU_0064 PATRIC:17928803 OMA:GNVCVAR
BioCyc:CBUR227377:GJ7S-66-MONOMER Uniprot:Q83F84
Length = 641
Score = 866 (309.9 bits), Expect = 1.3e-86, P = 1.3e-86
Identities = 215/628 (34%), Positives = 327/628 (52%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MY ++ P +HL +E +DN+VDEA AG+A N+EV L D S+ V D+GRG+PID+HP
Sbjct: 36 MYTDTSRP---NHLAHEAIDNSVDEAIAGFAQNVEVILYKDGSLEVIDDGRGMPIDVHPE 92
Query: 61 TNKSALETVLTVLHAXXXXXXXXXXXXXXXXXXXXXXXXXNALSESLEVTVWRDGMEYHQ 120
+ +E +LT LHA NALS+ L V V +DG Y
Sbjct: 93 HKLTGVELILTRLHAGAKFSTKTYEYSGGLHGVGISVV--NALSKKLTVQVKKDGKIYQM 150
Query: 121 KYSRGKPVTTLTCHVLPVDS--KDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFL 178
++ G+ + L PV S K GT I FWPD F + ++F + + +R A L
Sbjct: 151 DFAHGEKTSKLR----PVGSCNKSESGTSIHFWPDSHYFDS-VKFGVSALKHTMRAKAVL 205
Query: 179 NPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDV--VG-FRKDVDGIT 235
P LT+ E++ Q ++++A GL+ Y+ D++ L + VG F + +
Sbjct: 206 CPGLTVHFIDENT----GQRLQWYYAEGLKTYLADSLRDRERLPEEPWVGSFSGETE--K 259
Query: 236 IDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISL 295
D AL W + Y N I T GGTH+ G++ L + + K + +++ L
Sbjct: 260 ADWALAWLPEDDEGIRESYVNLIPTPQGGTHVNGLRTGLLEAMREFCEIHKLLP-RNLKL 318
Query: 296 SGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVXXX 355
+ E + E ++SV++ P+F GQTK RL + + V V++ + +L + ++
Sbjct: 319 ASEDIWEQCHYVLSVKMQEPQFSGQTKERLTSRQSAVFVSGVVKDAFSLWLNHNVEIGKT 378
Query: 356 XXXXXXXXXXXXXXXXXXXXXVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGG 415
+ +K V +LPGKLADC + P + E+F+VEGDSAGG
Sbjct: 379 LAELVIANAQKRLRMSKK---IERKKVTTGPALPGKLADCILSDPMQCELFLVEGDSAGG 435
Query: 416 SAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRY 475
SAKQ RD+ FQAI+PLRGKILN D + ++ + ++ A+ +GV + E LRY
Sbjct: 436 SAKQARDKNFQAIMPLRGKILNTWEVDTEQVLASQTVHDI--AIAIGVDPDSSNLEGLRY 493
Query: 476 HKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDA 535
KI IL DAD DG HI TLL F ++ L G +YV +PPLY+++ GK V Y D+
Sbjct: 494 GKICILADADSDGYHIATLLCALFMKHFYPLVVSGHVYVAMPPLYRIDVGKDVFYALDEE 553
Query: 536 E----LKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANV 591
E L ++K+ A+ +IQRFKGLGEM P QL ETT+NP+ R L +L ++ +
Sbjct: 554 EKEGVLDRIKAEKLKGAI-NIQRFKGLGEMNPSQLRETTMNPDTRHLVRLTVKSKDKTEQ 612
Query: 592 VFSSLMGA-RVDTRKELIQNAANLVNLD 618
+ L+ R R++ ++ NL ++
Sbjct: 613 LLDMLLAKKRAADRRDWLEKKGNLAEVE 640
>UNIPROTKB|P20083 [details] [associations]
symbol:parE species:83333 "Escherichia coli K-12"
[GO:0030541 "plasmid partitioning" evidence=IDA] [GO:0051276
"chromosome organization" evidence=IMP] [GO:0007062 "sister
chromatid cohesion" evidence=IMP] [GO:0005694 "chromosome"
evidence=IEA] [GO:0009295 "nucleoid" evidence=IBA] [GO:0046677
"response to antibiotic" evidence=IEA] [GO:0016853 "isomerase
activity" evidence=IEA] [GO:0006265 "DNA topological change"
evidence=IEA;IBA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003918 "DNA topoisomerase type II (ATP-hydrolyzing) activity"
evidence=IEA;IBA] [GO:0003916 "DNA topoisomerase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0006261 "DNA-dependent DNA replication" evidence=IBA]
InterPro:IPR001241 InterPro:IPR002288 InterPro:IPR003594
InterPro:IPR005737 InterPro:IPR013506 InterPro:IPR013759
InterPro:IPR013760 InterPro:IPR018522 Pfam:PF00204 Pfam:PF00986
Pfam:PF02518 PRINTS:PR00418 PROSITE:PS00177 SMART:SM00387
SMART:SM00433 Pfam:PF01751 InterPro:IPR006171 GO:GO:0005524
GO:GO:0005694 EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0046677 GO:GO:0006261 EMBL:U28377
Gene3D:3.30.565.10 SUPFAM:SSF55874 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0009295
GO:GO:0007062 GO:GO:0006265 GO:GO:0003918 SUPFAM:SSF56719
eggNOG:COG0187 Gene3D:3.40.50.670 PROSITE:PS50880
HOGENOM:HOG000075154 GO:GO:0030541 KO:K02622 ProtClustDB:PRK05559
EMBL:M58409 EMBL:L22026 PIR:D65090 RefSeq:NP_417502.1
RefSeq:YP_491222.1 PDB:1S14 PDB:1S16 PDB:3FV5 PDBsum:1S14
PDBsum:1S16 PDBsum:3FV5 ProteinModelPortal:P20083 SMR:P20083
DIP:DIP-10441N IntAct:P20083 MINT:MINT-1223307 PRIDE:P20083
EnsemblBacteria:EBESCT00000001166 EnsemblBacteria:EBESCT00000016957
GeneID:12933399 GeneID:947501 KEGG:ecj:Y75_p2956 KEGG:eco:b3030
PATRIC:32121470 EchoBASE:EB0681 EcoGene:EG10687 OMA:GFIQSYC
BioCyc:EcoCyc:EG10687-MONOMER BioCyc:ECOL316407:JW2998-MONOMER
BindingDB:P20083 EvolutionaryTrace:P20083 Genevestigator:P20083
HAMAP:MF_00938 TIGRFAMs:TIGR01055 Uniprot:P20083
Length = 630
Score = 847 (303.2 bits), Expect = 1.3e-84, P = 1.3e-84
Identities = 209/623 (33%), Positives = 319/623 (51%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MY +T P +HL E++DN+VDEA AG+A ++V L AD S+ V D+GRG+P+D+HP
Sbjct: 25 MYTDTTRP---NHLGQEVIDNSVDEALAGHAKRVDVILHADQSLEVIDDGRGMPVDIHPE 81
Query: 61 TNKSALETVLTVLHAXXXXXXXXXXXXXXXXXXXXXXXXXNALSESLEVTVWRDGMEYHQ 120
A+E +L LHA NALS+ +EV V RDG Y+
Sbjct: 82 EGVPAVELILCRLHAGGKFSNKNYQFSGGLHGVGISVV--NALSKRVEVNVRRDGQVYNI 139
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+ G+ V L V+ K GT + FWPD+ F + +F + + ++ A L P
Sbjct: 140 AFENGEKVQDL--QVVGTCGKRNTGTSVHFWPDETFFDSP-RFSVSRLTHVLKAKAVLCP 196
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNT-DKKPLHDVVGFRKDVDGITIDLA 239
+ I + E ++ E+ + L E V L T +KP + F D + + D A
Sbjct: 197 GVEITFKDEINNTEQRWCYQDGLNDYLAEAVNGLPTLPEKPF--IGNFAGDTEAV--DWA 252
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
L W + Y N I T+ GGTH+ G++ L + + + + + + LS E
Sbjct: 253 LLWLPEGGELLTESYVNLIPTMQGGTHVNGLRQGLLDAMREFCEY-RNILPRGVKLSAED 311
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVXXXXXXX 359
+ + ++SV++ +P+F GQTK RL + + V V++ L L+ +V
Sbjct: 312 IWDRCAYVLSVKMQDPQFAGQTKERLSSRQCAAFVSGVVKDAFI--LWLNQNVQAAELLA 369
Query: 360 XXXXXXXXXXXXXXXXXVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
VR+K + +LPGKLADC++ +E+F+VEGDSAGGSAKQ
Sbjct: 370 EMAISSAQRRMRAAKKVVRKK-LTSGPALPGKLADCTAQDLNRTELFLVEGDSAGGSAKQ 428
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
RDR +QAI+PL+GKILN + ++E+ ++ A+G+ +D + LRY KI
Sbjct: 429 ARDREYQAIMPLKGKILNTWEVSSDEVLASQEVHDISVAIGIDPDSDDLSQ--LRYGKIC 486
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
IL DAD DG HI TLL F ++ + L G +YV +PPLY+++ GK+V Y + E +
Sbjct: 487 ILADADSDGLHIATLLCALFVKHFRALVKHGHVYVALPPLYRIDLGKEVYYALTEEEKEG 546
Query: 540 VKSSFP-SNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVI--EDAAEANVVFSSL 596
V ++QRFKGLGEM P+QL ETTL+P R L QL I ED + + L
Sbjct: 547 VLEQLKRKKGKPNVQRFKGLGEMNPMQLRETTLDPNTRRLVQLTIDDEDDQRTDAMMDML 606
Query: 597 MGA-RVDTRKELIQNAANLVNLD 618
+ R + R+ +Q ++ ++
Sbjct: 607 LAKKRSEDRRNWLQEKGDMAEIE 629
>TAIR|locus:2146658 [details] [associations]
symbol:GYRB3 "DNA GYRASE B3" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003918
"DNA topoisomerase type II (ATP-hydrolyzing) activity"
evidence=IEA;ISS;IBA] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005694 "chromosome"
evidence=IEA] [GO:0006200 "ATP catabolic process" evidence=IBA]
[GO:0006259 "DNA metabolic process" evidence=ISS] [GO:0006261
"DNA-dependent DNA replication" evidence=IBA] [GO:0006265 "DNA
topological change" evidence=IEA;ISS;IBA] [GO:0007059 "chromosome
segregation" evidence=IBA] [GO:0008094 "DNA-dependent ATPase
activity" evidence=IBA] [GO:0009330 "DNA topoisomerase complex
(ATP-hydrolyzing)" evidence=IBA] [GO:0003916 "DNA topoisomerase
activity" evidence=IGI] InterPro:IPR001005 InterPro:IPR001241
InterPro:IPR013506 Pfam:PF00204 SMART:SM00433 SMART:SM00717
GO:GO:0005524 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0005694
GO:GO:0007059 GO:GO:0003682 GO:GO:0006261 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0009330
GO:GO:0006265 GO:GO:0003918 eggNOG:COG0187 KO:K02470 EMBL:AY074291
EMBL:AY091322 EMBL:AY519549 IPI:IPI00536772 RefSeq:NP_196031.2
UniGene:At.33174 ProteinModelPortal:Q8VY11 SMR:Q8VY11
EnsemblPlants:AT5G04110.1 GeneID:830289 KEGG:ath:AT5G04110
TAIR:At5g04110 InParanoid:Q8VY11 Genevestigator:Q8VY11
Uniprot:Q8VY11
Length = 546
Score = 656 (236.0 bits), Expect = 2.3e-64, P = 2.3e-64
Identities = 138/252 (54%), Positives = 170/252 (67%)
Query: 178 LNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGITID 237
L ++T++L ED+DP K EY +A GL E+V WLN DKKPLHDV+GFRK+++G TI+
Sbjct: 17 LRVQITVSLEMEDNDPNK----EYLYAKGLSEFVTWLNADKKPLHDVLGFRKEINGTTIN 72
Query: 238 LALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSG 297
+ALQWC D YS+ +LGYAN IRT+DGGT+I+GVKAS+TRTLNSL +KSK V+DKDI +
Sbjct: 73 IALQWCVDGYSNKILGYANGIRTMDGGTYIDGVKASITRTLNSLVEKSKLVEDKDIIFTE 132
Query: 298 EHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVXXXXX 357
EHV EGLTCI+SV VP PEFEGQT+ RLGNP VR++VDQSVQE L E ELHPDV
Sbjct: 133 EHVMEGLTCIVSVIVPKPEFEGQTQ-RLGNPNVREIVDQSVQECLMESFELHPDVFESIM 191
Query: 358 XXXXXXXXXXXXXXXXXXXVRQKSVLRS---SSLPGKLADCSSTTPEESEIFIVEGDSAG 414
+SV S+P KL + SS T SE FI G S+G
Sbjct: 192 SKSYNAYKTDLAVKRARDVYSSESVAMVCAIESIPMKLTNSSSET---SETFIGRGVSSG 248
Query: 415 GSAKQGRDRRFQ 426
G+AK DR F+
Sbjct: 249 GAAKHDSDRCFK 260
>UNIPROTKB|Q8A3C1 [details] [associations]
symbol:BT_3033 "DNA topoisomerase IV subunit B"
species:226186 "Bacteroides thetaiotaomicron VPI-5482" [GO:0003918
"DNA topoisomerase type II (ATP-hydrolyzing) activity"
evidence=IBA] [GO:0006261 "DNA-dependent DNA replication"
evidence=IBA] [GO:0006265 "DNA topological change" evidence=IBA]
[GO:0007059 "chromosome segregation" evidence=IBA] [GO:0009295
"nucleoid" evidence=IBA] InterPro:IPR001241 InterPro:IPR002288
InterPro:IPR003594 InterPro:IPR013506 InterPro:IPR013759
InterPro:IPR013760 InterPro:IPR018522 Pfam:PF00204 Pfam:PF00986
Pfam:PF02518 PRINTS:PR00418 PROSITE:PS00177 SMART:SM00387
SMART:SM00433 Pfam:PF01751 InterPro:IPR006171 GO:GO:0005524
GO:GO:0005694 GO:GO:0007059 GO:GO:0006261 Gene3D:3.30.565.10
SUPFAM:SSF55874 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 EMBL:AE015928
GenomeReviews:AE015928_GR GO:GO:0009295 GO:GO:0006265 GO:GO:0003918
SUPFAM:SSF56719 Gene3D:3.40.50.670 HOGENOM:HOG000075156 KO:K02622
ProtClustDB:PRK05559 HSSP:P06982 OMA:VFESQTK RefSeq:NP_811945.1
ProteinModelPortal:Q8A3C1 GeneID:1074020 KEGG:bth:BT_3033
PATRIC:21061047 BioCyc:BTHE226186:GJXV-3097-MONOMER Uniprot:Q8A3C1
Length = 625
Score = 410 (149.4 bits), Expect = 3.0e-48, Sum P(2) = 3.0e-48
Identities = 127/399 (31%), Positives = 184/399 (46%)
Query: 233 GITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKD 292
G I++A Y + + N T GGTH K + RT+ K+ D
Sbjct: 243 GEDIEIAFTHTGQ-YGEEYYSFVNGQHTTQGGTHQSAFKEHIARTIKEFFNKNMDYTD-- 299
Query: 293 ISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPE-------VRKVVDQSVQEYLTEY 345
+R GL I+V V P FE QTKT+LG+ V K V ++ + +
Sbjct: 300 -------IRNGLVAAIAVNVEEPIFESQTKTKLGSTNMTPGGVTVNKYVGDFIKLEVDNF 352
Query: 346 LELHPDVXXXXXXXXXXXXXXXXXXXXXXXXVRQKSVLRSSSLPG-KLADCSS--TTP-- 400
L + DV R+++ + ++L KL DC P
Sbjct: 353 LHKNADVAEVMQQKIQESEKERKAIAGVTKLARERA--KKANLHNRKLRDCRIHLNDPKG 410
Query: 401 ----EESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLI 456
E+S IFI EGDSA GS + RD QA+ LRGK LN + +Y+NEE NL+
Sbjct: 411 KGMEEDSCIFITEGDSASGSITKSRDVNTQAVFSLRGKPLNSFGLTKKVVYENEEF-NLL 469
Query: 457 RALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGV 516
+A L + ED E LRY+K+I+ TDADVDG HIR LL+TFF ++ L +G +Y+
Sbjct: 470 QA-ALNI--ED-GIEGLRYNKVIVATDADVDGMHIRLLLITFFLQFFPDLIKKGHVYILQ 525
Query: 517 PPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQR 576
PL++V K+ YCY + E + N I RFKGLGE+ P + ++ + + R
Sbjct: 526 TPLFRVRNKKKTVYCYSEDERVNAINELSPNP--EITRFKGLGEISPDE-FKHFIGKDMR 582
Query: 577 MLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLV 615
L+Q+ + + MG R+ I + NLV
Sbjct: 583 -LEQVTLRKTDAVKELLEFYMGKNTMERQNFIID--NLV 618
Score = 140 (54.3 bits), Expect = 3.0e-48, Sum P(2) = 3.0e-48
Identities = 54/189 (28%), Positives = 79/189 (41%)
Query: 1 MYIGSTGPR-----GLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPI 55
MYIG G G++ L+ E++DN++DE + IE+ + + VSV D GRGIP
Sbjct: 37 MYIGRLGDGAHAEDGIYVLLKEVIDNSIDEFKMQAGKKIEITVEENLRVSVRDYGRGIP- 95
Query: 56 DLHPATNKSALETVLTVLHAXXXXXXXXXXXXXXXXXXXXXXXXXNALSESLEVTVWRDG 115
+ L ++VL+ NALS EV +RDG
Sbjct: 96 -------QGKLVEAVSVLNTGGKYDSKAFKKSVGLNGVGVKAV--NALSSRFEVRSYRDG 146
Query: 116 MEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIREL 175
+S+G T +T D+++ GT I F PD +F F I +R
Sbjct: 147 KVRIATFSKGNLQTDVT-----QDTEEDNGTFIFFEPDNTLFVNYC-FKPEFIETMLRNY 200
Query: 176 AFLNPKLTI 184
+LN L I
Sbjct: 201 TYLNTGLAI 209
>UNIPROTKB|Q3KL33 [details] [associations]
symbol:gyrB_2 "DNA gyrase subunit B" species:315277
"Chlamydia trachomatis A/HAR-13" [GO:0003918 "DNA topoisomerase
type II (ATP-hydrolyzing) activity" evidence=IBA] [GO:0006261
"DNA-dependent DNA replication" evidence=IBA] [GO:0006265 "DNA
topological change" evidence=IBA] [GO:0007059 "chromosome
segregation" evidence=IBA] [GO:0009295 "nucleoid" evidence=IBA]
InterPro:IPR001241 InterPro:IPR002288 InterPro:IPR003594
InterPro:IPR013506 InterPro:IPR013759 InterPro:IPR013760
Pfam:PF00204 Pfam:PF00986 Pfam:PF02518 PRINTS:PR00418 SMART:SM00387
SMART:SM00433 Pfam:PF01751 InterPro:IPR006171 GO:GO:0005524
GO:GO:0005694 GO:GO:0007059 GO:GO:0006261 Gene3D:3.30.565.10
SUPFAM:SSF55874 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0009295 EMBL:CP000051
GenomeReviews:CP000051_GR GO:GO:0006265 GO:GO:0003918
SUPFAM:SSF56719 eggNOG:COG0187 KO:K02470 Gene3D:3.40.50.670
HOGENOM:HOG000075156 ProtClustDB:PRK05559 RefSeq:YP_328487.1
ProteinModelPortal:Q3KL33 STRING:Q3KL33 GeneID:3687725
KEGG:cta:CTA_0718 PATRIC:32023360 OMA:VFESQTK
BioCyc:CTRA315277:GI4C-739-MONOMER Uniprot:Q3KL33
Length = 605
Score = 418 (152.2 bits), Expect = 3.9e-47, Sum P(2) = 3.9e-47
Identities = 118/388 (30%), Positives = 185/388 (47%)
Query: 237 DLALQWC-SDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISL 295
DLA + ++ S+ + N T DGGTH+ K + + +N K+
Sbjct: 234 DLAFLFSHTETSSEQYFSFVNGQETTDGGTHLVAFKEGIVKGVNEFFGKN---------F 284
Query: 296 SGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVXXX 355
S + +REGL I++++ +P FE QTK +LGN +R + + V+E + L+ +P
Sbjct: 285 SSQDIREGLAGCIAIKIASPIFESQTKNKLGNTNIRAELAKRVKEAVLSSLKKNPSSAER 344
Query: 356 XXXXXXXXXXXXXXXXXXXXXVRQKSVLRSSSLPGKLADC------SSTTPEESEIFIVE 409
++ K +P KL DC +S + S IFI E
Sbjct: 345 IQEKIKLNEKTRKNAQFLKQELKDKQKKLHYKIP-KLRDCKFHLTDNSLYGKNSSIFITE 403
Query: 410 GDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFK 469
G+SA S R+ QA+ LRGK +NV E +YKN+E+ L ALGL +D
Sbjct: 404 GESASASILASRNPLTQAVFSLRGKPMNVFSSKEETIYKNDELFYLTTALGLH---KD-S 459
Query: 470 KEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQ 529
+ LRY+++I+ TDADVDG HIR L++TFF + L +++ PL+KV
Sbjct: 460 LQNLRYNQVILATDADVDGMHIRNLMITFFLKTFLPLVASNHLFILETPLFKVRHKDATF 519
Query: 530 YCYDDAE-LKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAE 588
YCY + E L ++ + I RFKGLGE+ P + +++ + + R L + + D
Sbjct: 520 YCYSEEEKLSTIEHIGKKESSLEITRFKGLGEISPKE-FKSFIGADMR-LTPVSLPDTET 577
Query: 589 ANVVFSSLMGARVDTRKE-LIQN-AANL 614
+ + MG RK +I+N NL
Sbjct: 578 LDTLLQFYMGKNTKERKLFIIENLVTNL 605
Score = 108 (43.1 bits), Expect = 3.9e-47, Sum P(2) = 3.9e-47
Identities = 66/302 (21%), Positives = 111/302 (36%)
Query: 1 MYIGSTGPRG-LHHLVYEILDNAVDEAQAGYASNI--EVALLAD-NSVSVADNGRGIPID 56
MYIG G +Y + VD A + + + D + +S+ D GRGIP+
Sbjct: 27 MYIGRLGDGSQAEDGIYTLFKEVVDNAIDEFVMGYGHTIHITGDAHELSIRDEGRGIPLG 86
Query: 57 LHPATNKSALETVLTVLHAXXXXXXXXXXXXXXXXXXXXXXXXXNALSESLEVTVWRDGM 116
++ V + NALS+ V R+
Sbjct: 87 -------KVIDCVSKI---NTGAKYTQDVFHFSVGLNGVGLKAVNALSQHFSVRSVRNKK 136
Query: 117 EYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELA 176
+S+G + H ++D GT + F PD ++F F + +IR+
Sbjct: 137 FLKASFSKG-----ILLHTEQGATQDPDGTEVVFSPDHELFEN-FSFQVEFLKKKIRQYT 190
Query: 177 FLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPL-HDVVGFRKDVDGIT 235
+L+P LTI E + + + EE VQ PL + + F+ D
Sbjct: 191 YLHPGLTIIYNGERIVSTRGLLDLF------EEEVQ------TPLLYSPITFQHS-DLAF 237
Query: 236 IDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISL 295
+ + S+ Y + N T DGGTH+ K + + +N K+ + +D L
Sbjct: 238 LFSHTETSSEQY----FSFVNGQETTDGGTHLVAFKEGIVKGVNEFFGKNFSSQDIREGL 293
Query: 296 SG 297
+G
Sbjct: 294 AG 295
>DICTYBASE|DDB_G0279737 [details] [associations]
symbol:top2mt "DNA topoisomerase II" species:44689
"Dictyostelium discoideum" [GO:0006265 "DNA topological change"
evidence=IEA;IC;IBA] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0003918 "DNA topoisomerase type II (ATP-hydrolyzing) activity"
evidence=IEA;ISS;IBA] [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0006259 "DNA metabolic process" evidence=IEA] [GO:0005694
"chromosome" evidence=IEA] [GO:0009295 "nucleoid" evidence=IBA]
[GO:0044774 "mitotic DNA integrity checkpoint" evidence=IBA]
[GO:0007059 "chromosome segregation" evidence=IBA] [GO:0006312
"mitotic recombination" evidence=IBA] [GO:0006261 "DNA-dependent
DNA replication" evidence=IBA] [GO:0000819 "sister chromatid
segregation" evidence=IBA] [GO:0000795 "synaptonemal complex"
evidence=IBA] [GO:0000712 "resolution of meiotic recombination
intermediates" evidence=IBA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0016853 "isomerase activity" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0003916 "DNA
topoisomerase activity" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR001241 InterPro:IPR002205
InterPro:IPR003594 InterPro:IPR013506 InterPro:IPR013757
InterPro:IPR013758 InterPro:IPR013759 InterPro:IPR013760
InterPro:IPR018522 Pfam:PF00204 Pfam:PF00521 Pfam:PF02518
PRINTS:PR00418 PROSITE:PS00177 SMART:SM00387 SMART:SM00433
SMART:SM00434 dictyBase:DDB_G0279737 Pfam:PF01751
InterPro:IPR006171 GO:GO:0005739 GO:GO:0005524
GenomeReviews:CM000152_GR GO:GO:0006261 Gene3D:3.30.565.10
SUPFAM:SSF55874 EMBL:AAFI02000032 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211
Gene3D:3.30.1360.40 InterPro:IPR024946 GO:GO:0000819 GO:GO:0006312
GO:GO:0070683 GO:GO:0000712 GO:GO:0000795 GO:GO:0006265
GO:GO:0003918 Gene3D:3.90.199.10 SUPFAM:SSF56719 Gene3D:1.10.268.10
eggNOG:COG0187 Gene3D:3.40.50.670 PROSITE:PS50880 KO:K03164
EMBL:D82024 PIR:T30577 RefSeq:XP_641531.1 ProteinModelPortal:P90520
STRING:P90520 EnsemblProtists:DDB0214907 GeneID:8622204
KEGG:ddi:DDB_G0279737 OMA:MQDRRER ProtClustDB:PTZ00108
Uniprot:P90520
Length = 1284
Score = 381 (139.2 bits), Expect = 4.0e-32, P = 4.0e-32
Identities = 146/598 (24%), Positives = 254/598 (42%)
Query: 10 GLHHLVYEILDNAVDEAQA-GYASNIEVALLA-DNSVSVADNGRGIPIDLHPATNKSALE 67
GL + EIL NA D + S I+V + +NS+S+ ++G+GIP+ +H N +E
Sbjct: 172 GLLKIYDEILVNAADNKKRDSKMSFIKVEINPNENSISIMNDGKGIPVVMHQTENCYVVE 231
Query: 68 TVLTVLHAXXXXXXXXXXXXXXXXXXXXXXXXXNALSESLEVTVWRDGMEYHQKYS---- 123
V+ L + + ++E G +Y Q++S
Sbjct: 232 MVMGNLMSGSNFNDSELKVVGGRNGFGAKLTNIFSKEFTVETVDKSSGKKYFQRWSNNMG 291
Query: 124 -RGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIA---GRIRELAFLN 179
R +P+ T P+ + T+I F PD + F +D N + R+ ++A N
Sbjct: 292 DRSEPIIT------PIGEGESDYTKITFKPDLEKFKIKSLWDDNILQLMERRLYDIAGCN 345
Query: 180 PKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGITIDLA 239
+L + L + ++ YN F ++ Y LN K + +R++ +++
Sbjct: 346 TELMVTL-----NGKRLNYN---FQSYVKLYEHHLNNSTKREDNEEQYREESFEFG-EIS 396
Query: 240 LQW-----CSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDIS 294
+W S+ T + + NSI T+ GGTH+ + + R + G+K K K D+
Sbjct: 397 PRWKIGIGLSETGQFTQVSFVNSINTVKGGTHVNFLADQIVRYV---GEKLKK-KHSDLE 452
Query: 295 LSGEHVREGLTCIISVRVPNPEFEGQTKTRLGN-PEVRKVVDQSVQEYLTEYLELHPDVX 353
+ +++ L ++ V NP F+ Q+K L P + + + L ++++ +
Sbjct: 453 IRPMNIKHHLALFVNCLVDNPSFDSQSKETLTTKPMLFGSTPEIPESLLAQFVKNSKIIE 512
Query: 354 XXXXXXXXXXXXXXXXXXXXXXXVRQKSVLRSSSLPGKLADCS---STTPEESEIFIVEG 410
RQ S+ KL D + +E + I EG
Sbjct: 513 RVAGWALMKQKADLIHSTSG----RQSKTTLIKSI-SKLDDANWAGGLKSKECTLIITEG 567
Query: 411 DSAGGSAKQGRD---RRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGE- 466
DSA A G R + PLRGK+LNV + NEEI NL LGL K
Sbjct: 568 DSAKSLALAGLSVVGRNSYGVFPLRGKLLNVRDVASKQLLSNEEINNLTTILGLSHKNSY 627
Query: 467 --DFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVER 524
D E LRY +++I+ D D DG+HI+ L++ F + + L G + V P+ K +
Sbjct: 628 DTDESMEDLRYGRVMIMADQDHDGSHIKGLVMNFIHYFWPNLLKRGFLVEFVTPIIKATK 687
Query: 525 GK-QVQYCYDDAELKKVKSSFPSNAL--YSIQRFKGLGEMMPVQLWETTLNPEQRMLK 579
Q + + + +K + + S+ L Y+I+ +KGLG + E N ++ ++K
Sbjct: 688 SSTQKKSFFTIKDYEKWRETISSDQLKQYTIKYYKGLGTSTSAEAKEYFSNLDKHVIK 745
>UNIPROTKB|Q0DYE1 [details] [associations]
symbol:Os02g0699700 "DNA topoisomerase 2" species:39947
"Oryza sativa Japonica Group" [GO:0000712 "resolution of meiotic
recombination intermediates" evidence=IBA] [GO:0000795
"synaptonemal complex" evidence=IBA] [GO:0000819 "sister chromatid
segregation" evidence=IBA] [GO:0003918 "DNA topoisomerase type II
(ATP-hydrolyzing) activity" evidence=IBA] [GO:0006261
"DNA-dependent DNA replication" evidence=IBA] [GO:0006265 "DNA
topological change" evidence=IBA] [GO:0006312 "mitotic
recombination" evidence=IBA] [GO:0007059 "chromosome segregation"
evidence=IBA] [GO:0009295 "nucleoid" evidence=IBA]
InterPro:IPR001241 InterPro:IPR002205 InterPro:IPR003594
InterPro:IPR013506 InterPro:IPR013758 InterPro:IPR013759
InterPro:IPR013760 InterPro:IPR018522 Pfam:PF00204 Pfam:PF00521
Pfam:PF02518 PRINTS:PR00418 PROSITE:PS00177 SMART:SM00387
SMART:SM00433 SMART:SM00434 Pfam:PF01751 InterPro:IPR006171
GO:GO:0005524 GO:GO:0006261 Gene3D:3.30.565.10 SUPFAM:SSF55874
EMBL:AP008208 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 Gene3D:3.30.1360.40
InterPro:IPR024946 GO:GO:0000819 GO:GO:0006312 GO:GO:0070683
GO:GO:0000712 GO:GO:0000795 GO:GO:0006265 GO:GO:0003918
Gene3D:3.90.199.10 SUPFAM:SSF56719 Gene3D:3.40.50.670 KO:K03164
RefSeq:NP_001047833.1 UniGene:Os.34202 ProteinModelPortal:Q0DYE1
STRING:Q0DYE1 PRIDE:Q0DYE1 GeneID:4330426 KEGG:osa:4330426
Gramene:Q0DYE1 Uniprot:Q0DYE1
Length = 956
Score = 340 (124.7 bits), Expect = 1.1e-27, P = 1.1e-27
Identities = 149/632 (23%), Positives = 264/632 (41%)
Query: 10 GLHHLVYEILDNAVDEAQAGYA-SNIEVALLADNS-VSVADNGRGIPIDLHPATNKSALE 67
GL+ + EIL NA D Q + ++ V + AD +SV +NG GIP+++H E
Sbjct: 77 GLYKIFDEILVNAADNKQRDPSMDSLRVEIDADEGRISVYNNGDGIPVEIHQEEGVYVPE 136
Query: 68 TVLTVLHAXXXXXXXXXXXXXXXXXXXXXXXXXNALSES--LEVTVWRDGMEYHQKYSRG 125
+ H N S +E R +Y Q +S
Sbjct: 137 MIFG--HLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFVIETADGRRQKKYKQVFSEN 194
Query: 126 KPVTTLTCHVLPVDSKDRQG---TRIRFWPDKQVFTTAIQFDHNTIA---GRIRELAFLN 179
+ P +K +QG TR+ F PD F +++ +A R+ ++A
Sbjct: 195 MGKKSE-----PQITKCKQGENWTRVTFKPDLAKFNMT-HLENDVVALMRKRVVDMAGTL 248
Query: 180 PKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGITIDLA 239
K T+ + + + +++Y ++ Y++ + D+ ++++ + V+ ++
Sbjct: 249 GK-TVKVELDHQKVPVHSFSDY-----VKLYIKSASKDRDDVNELPSISQKVND-RWEVC 301
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASL-TRTLNSLGKKSKTVKDKDISLSGE 298
+ + + + N I TI GGTH++ V + T +N + K++K K
Sbjct: 302 VSLSEGQFQQ--VSFVNRIATIKGGTHVDYVTNQIATHVMNIVNKRNKNAHMK-----AH 354
Query: 299 HVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVXXXXXX 358
+V+ L ++ + NP F+ QTK L R+ S E ++L+
Sbjct: 355 NVKSHLWVFVNALIDNPAFDSQTKETL---TTRQASFGSKCELSDDFLKKVGSSAIVLNL 411
Query: 359 XXXXXXXXXXXXXXXXXXVRQKSVLRSSSLPGKLADCSSTTPEESE---IFIVEGDSAGG 415
R R + +P KL D + ++S + + EGDSA
Sbjct: 412 LSWAEFKLSKELQKTDGSKRS----RLTGIP-KLEDANGAGGKDSNNCTLILTEGDSAKA 466
Query: 416 SAKQGRD---RRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKK-E 471
A G R + + PLRGK+LNV + +N EIQN+ + LGL G+ + +
Sbjct: 467 LAMAGISVVGRDYYGVFPLRGKLLNVREASHKQIMENAEIQNIKQILGLQ-HGKQYDSTK 525
Query: 472 ALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVG-VPPLYKV--ERGKQV 528
LRY ++I+TD D DG+HI+ LL+ F + + +L V + P+ K +R K++
Sbjct: 526 GLRYGHLMIMTDQDHDGSHIKGLLINFIHSFWPSLIKIPSFLVEFITPIIKATNKRDKKI 585
Query: 529 QY-CYDDAELKKVKSSFPSNAL-YSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDA 586
Y E ++ K S NA +SI+ +KGLG + + K V ++
Sbjct: 586 VLPFYSMPEYEQWKESLGGNASGWSIKYYKGLGTSTSSE-GRQYFQDIAKHKKDFVWKND 644
Query: 587 AEANVVFSSLMGARVDTRKELIQNAANLVNLD 618
+ N + + R+ RKE + N + +LD
Sbjct: 645 QDDNDIELAFSKKRITDRKEWLTNFQSGTHLD 676
>WB|WBGene00019884 [details] [associations]
symbol:R05D3.12 species:6239 "Caenorhabditis elegans"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003918 "DNA
topoisomerase type II (ATP-hydrolyzing) activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005694 "chromosome"
evidence=IEA] [GO:0006265 "DNA topological change" evidence=IEA]
[GO:0000003 "reproduction" evidence=IMP] [GO:0007276 "gamete
generation" evidence=IMP] InterPro:IPR001241 InterPro:IPR002205
InterPro:IPR003594 InterPro:IPR013506 InterPro:IPR013757
InterPro:IPR013758 InterPro:IPR013759 InterPro:IPR013760
InterPro:IPR018522 Pfam:PF00204 Pfam:PF00521 Pfam:PF02518
PRINTS:PR00418 PROSITE:PS00177 SMART:SM00387 SMART:SM00433
SMART:SM00434 Pfam:PF01751 InterPro:IPR006171 GO:GO:0005739
GO:GO:0005524 GO:GO:0006261 Gene3D:3.30.565.10 SUPFAM:SSF55874
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 Gene3D:3.30.1360.40 InterPro:IPR024946
GO:GO:0000819 GO:GO:0006312 EMBL:FO081667 GO:GO:0007276
GO:GO:0070683 GO:GO:0000712 GO:GO:0000795 GO:GO:0006265
GO:GO:0003918 Gene3D:3.90.199.10 SUPFAM:SSF56719 Gene3D:1.10.268.10
eggNOG:COG0187 Gene3D:3.40.50.670 PROSITE:PS50880
HOGENOM:HOG000216693 GeneTree:ENSGT00390000016222
RefSeq:NP_001129839.2 RefSeq:NP_001254958.1 RefSeq:NP_741252.2
ProteinModelPortal:P34534 SMR:P34534 PaxDb:P34534
EnsemblMetazoa:R05D3.12a GeneID:259522 KEGG:cel:CELE_R05D3.12
UCSC:R05D3.1 CTD:259522 WormBase:R05D3.12a WormBase:R05D3.12b
WormBase:R05D3.12c InParanoid:P34534 OMA:KLEDAEW NextBio:891486
Uniprot:P34534
Length = 1170
Score = 252 (93.8 bits), Expect = 5.7e-27, Sum P(2) = 5.7e-27
Identities = 72/228 (31%), Positives = 115/228 (50%)
Query: 399 TPEESEIFIVEGDSAGGSAKQGRD---RRFQAILPLRGKILNVERKDEAAMYKNEEIQNL 455
T E+ + + EGDSA A G + R + PL+GK+LNV D+A KNEEI NL
Sbjct: 471 TAEKCTLILTEGDSAKALALAGLEVLGRETYGVFPLKGKLLNVSNLDDARASKNEEISNL 530
Query: 456 IRALGLGVKGED-FKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFD-EGCIY 513
+R LGL + + +E+LRY +++IL D D DG+HI+ L++ F +++ +L +G I
Sbjct: 531 LRILGLKFEDSNSITRESLRYGRLLILADQDEDGSHIKGLIVNFIHKFWPSLVHTDGFIQ 590
Query: 514 VGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWE--TTL 571
PL K ++G +V+ + E +K + + I+ +KGLG + E + L
Sbjct: 591 SFRTPLLKAKKGDKVRSFFSMNEYRKW-ADVEEGGKWKIKYYKGLGTSTSNEAREYFSDL 649
Query: 572 NPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAAN-LVNLD 618
+ K D + F + D RKE I+ + N + N D
Sbjct: 650 DHHTVNFKYTGTTDDDAIRMAFDR---DKSDERKEWIRRSENEITNED 694
Score = 137 (53.3 bits), Expect = 5.7e-27, Sum P(2) = 5.7e-27
Identities = 81/328 (24%), Positives = 131/328 (39%)
Query: 6 TGPRGLHHLVYEILDNAVD-EAQAGYASNIEVALLADNS-VSVADNGRGIPIDLHPATNK 63
T P GL + EIL NA D +A+ + +EV L + + +SV +NG G+P+++HP T
Sbjct: 91 TYPPGLLKIFDEILVNAADNKARDSSMNRLEVWLDRETARISVWNNGSGLPVEIHP-TEG 149
Query: 64 SALETVLTVLHAXXXXXXXXXXXXXXXXXXXXXXXXXNALSESLEV-TV-WRDGMEYHQK 121
+ T L + N S+ V TV R + QK
Sbjct: 150 IYVPT-LVFGNLFTSSNYDDSEIKTVGGRNGYGAKLCNIFSKEFIVETVDTRIKRRFRQK 208
Query: 122 -YSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDH--NTIAGRIRELAFL 178
Y K V +D + T++ F PD + F D + I R+ E+A
Sbjct: 209 WYDNMKKCNEAEV-VEILDETVKDYTKVEFVPDLERFQIDKLSDDVIDLIGRRVFEVAAT 267
Query: 179 NPK-LTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGITID 237
P+ + + L + D + G E+YV+ N L R V G+
Sbjct: 268 LPRDVDVYLNGQKCDVD-----------GFEDYVKMFNDSSSLLFLHPTPRWHV-GVAKR 315
Query: 238 LALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSG 297
S ++ + N+I T GG+H++ V + + + SK + D S+
Sbjct: 316 NNFFGESHVVLPKIVSFVNNINTEKGGSHVDYVMDKIVNIIKPI-VDSK-LGDPTKSVKP 373
Query: 298 EHVREGLTCIISVRVPNPEFEGQTKTRL 325
++ L+ I+ + NP FE QTK L
Sbjct: 374 AVIKNNLSIFINCLIENPSFESQTKETL 401
>UNIPROTKB|P34534 [details] [associations]
symbol:R05D3.12 "Putative DNA topoisomerase 2,
mitochondrial" species:6239 "Caenorhabditis elegans" [GO:0009295
"nucleoid" evidence=IBA] [GO:0007059 "chromosome segregation"
evidence=IBA] [GO:0006312 "mitotic recombination" evidence=IBA]
[GO:0006265 "DNA topological change" evidence=IBA] [GO:0006261
"DNA-dependent DNA replication" evidence=IBA] [GO:0003918 "DNA
topoisomerase type II (ATP-hydrolyzing) activity" evidence=IBA]
[GO:0000819 "sister chromatid segregation" evidence=IBA]
[GO:0000795 "synaptonemal complex" evidence=IBA] [GO:0000712
"resolution of meiotic recombination intermediates" evidence=IBA]
InterPro:IPR001241 InterPro:IPR002205 InterPro:IPR003594
InterPro:IPR013506 InterPro:IPR013757 InterPro:IPR013758
InterPro:IPR013759 InterPro:IPR013760 InterPro:IPR018522
Pfam:PF00204 Pfam:PF00521 Pfam:PF02518 PRINTS:PR00418
PROSITE:PS00177 SMART:SM00387 SMART:SM00433 SMART:SM00434
Pfam:PF01751 InterPro:IPR006171 GO:GO:0005739 GO:GO:0005524
GO:GO:0006261 Gene3D:3.30.565.10 SUPFAM:SSF55874 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211
Gene3D:3.30.1360.40 InterPro:IPR024946 GO:GO:0000819 GO:GO:0006312
EMBL:FO081667 GO:GO:0007276 GO:GO:0070683 GO:GO:0000712
GO:GO:0000795 GO:GO:0006265 GO:GO:0003918 Gene3D:3.90.199.10
SUPFAM:SSF56719 Gene3D:1.10.268.10 eggNOG:COG0187
Gene3D:3.40.50.670 PROSITE:PS50880 HOGENOM:HOG000216693
GeneTree:ENSGT00390000016222 RefSeq:NP_001129839.2
RefSeq:NP_001254958.1 RefSeq:NP_741252.2 ProteinModelPortal:P34534
SMR:P34534 PaxDb:P34534 EnsemblMetazoa:R05D3.12a GeneID:259522
KEGG:cel:CELE_R05D3.12 UCSC:R05D3.1 CTD:259522 WormBase:R05D3.12a
WormBase:R05D3.12b WormBase:R05D3.12c InParanoid:P34534 OMA:KLEDAEW
NextBio:891486 Uniprot:P34534
Length = 1170
Score = 252 (93.8 bits), Expect = 5.7e-27, Sum P(2) = 5.7e-27
Identities = 72/228 (31%), Positives = 115/228 (50%)
Query: 399 TPEESEIFIVEGDSAGGSAKQGRD---RRFQAILPLRGKILNVERKDEAAMYKNEEIQNL 455
T E+ + + EGDSA A G + R + PL+GK+LNV D+A KNEEI NL
Sbjct: 471 TAEKCTLILTEGDSAKALALAGLEVLGRETYGVFPLKGKLLNVSNLDDARASKNEEISNL 530
Query: 456 IRALGLGVKGED-FKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFD-EGCIY 513
+R LGL + + +E+LRY +++IL D D DG+HI+ L++ F +++ +L +G I
Sbjct: 531 LRILGLKFEDSNSITRESLRYGRLLILADQDEDGSHIKGLIVNFIHKFWPSLVHTDGFIQ 590
Query: 514 VGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWE--TTL 571
PL K ++G +V+ + E +K + + I+ +KGLG + E + L
Sbjct: 591 SFRTPLLKAKKGDKVRSFFSMNEYRKW-ADVEEGGKWKIKYYKGLGTSTSNEAREYFSDL 649
Query: 572 NPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAAN-LVNLD 618
+ K D + F + D RKE I+ + N + N D
Sbjct: 650 DHHTVNFKYTGTTDDDAIRMAFDR---DKSDERKEWIRRSENEITNED 694
Score = 137 (53.3 bits), Expect = 5.7e-27, Sum P(2) = 5.7e-27
Identities = 81/328 (24%), Positives = 131/328 (39%)
Query: 6 TGPRGLHHLVYEILDNAVD-EAQAGYASNIEVALLADNS-VSVADNGRGIPIDLHPATNK 63
T P GL + EIL NA D +A+ + +EV L + + +SV +NG G+P+++HP T
Sbjct: 91 TYPPGLLKIFDEILVNAADNKARDSSMNRLEVWLDRETARISVWNNGSGLPVEIHP-TEG 149
Query: 64 SALETVLTVLHAXXXXXXXXXXXXXXXXXXXXXXXXXNALSESLEV-TV-WRDGMEYHQK 121
+ T L + N S+ V TV R + QK
Sbjct: 150 IYVPT-LVFGNLFTSSNYDDSEIKTVGGRNGYGAKLCNIFSKEFIVETVDTRIKRRFRQK 208
Query: 122 -YSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDH--NTIAGRIRELAFL 178
Y K V +D + T++ F PD + F D + I R+ E+A
Sbjct: 209 WYDNMKKCNEAEV-VEILDETVKDYTKVEFVPDLERFQIDKLSDDVIDLIGRRVFEVAAT 267
Query: 179 NPK-LTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGITID 237
P+ + + L + D + G E+YV+ N L R V G+
Sbjct: 268 LPRDVDVYLNGQKCDVD-----------GFEDYVKMFNDSSSLLFLHPTPRWHV-GVAKR 315
Query: 238 LALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSG 297
S ++ + N+I T GG+H++ V + + + SK + D S+
Sbjct: 316 NNFFGESHVVLPKIVSFVNNINTEKGGSHVDYVMDKIVNIIKPI-VDSK-LGDPTKSVKP 373
Query: 298 EHVREGLTCIISVRVPNPEFEGQTKTRL 325
++ L+ I+ + NP FE QTK L
Sbjct: 374 AVIKNNLSIFINCLIENPSFESQTKETL 401
>RGD|62048 [details] [associations]
symbol:Top2a "topoisomerase (DNA) II alpha" species:10116 "Rattus
norvegicus" [GO:0000287 "magnesium ion binding" evidence=ISO;ISS]
[GO:0000712 "resolution of meiotic recombination intermediates"
evidence=IBA] [GO:0000793 "condensed chromosome" evidence=ISO]
[GO:0000795 "synaptonemal complex" evidence=IBA] [GO:0000819 "sister
chromatid segregation" evidence=IBA] [GO:0003677 "DNA binding"
evidence=ISO;TAS] [GO:0003682 "chromatin binding" evidence=ISO;IDA]
[GO:0003916 "DNA topoisomerase activity" evidence=IDA] [GO:0003918
"DNA topoisomerase type II (ATP-hydrolyzing) activity"
evidence=ISO;IDA] [GO:0005080 "protein kinase C binding"
evidence=ISO] [GO:0005524 "ATP binding" evidence=IDA;TAS]
[GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005654 "nucleoplasm"
evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO;IDA] [GO:0006200
"ATP catabolic process" evidence=ISO] [GO:0006261 "DNA-dependent DNA
replication" evidence=IBA] [GO:0006265 "DNA topological change"
evidence=ISO;IDA] [GO:0006266 "DNA ligation" evidence=ISO]
[GO:0006312 "mitotic recombination" evidence=IBA] [GO:0006974
"response to DNA damage stimulus" evidence=ISO] [GO:0007059
"chromosome segregation" evidence=ISO;IBA] [GO:0007420 "brain
development" evidence=IEP] [GO:0007568 "aging" evidence=IEP]
[GO:0008022 "protein C-terminus binding" evidence=ISO] [GO:0008094
"DNA-dependent ATPase activity" evidence=ISO] [GO:0008144 "drug
binding" evidence=ISO] [GO:0008301 "DNA binding, bending"
evidence=ISO;ISS] [GO:0009295 "nucleoid" evidence=IBA] [GO:0009330
"DNA topoisomerase complex (ATP-hydrolyzing)" evidence=ISO;IDA]
[GO:0019899 "enzyme binding" evidence=ISO] [GO:0021702 "cerebellar
Purkinje cell differentiation" evidence=IEP] [GO:0021707 "cerebellar
granule cell differentiation" evidence=IEP] [GO:0030261 "chromosome
condensation" evidence=ISO] [GO:0030263 "apoptotic chromosome
condensation" evidence=ISO] [GO:0040016 "embryonic cleavage"
evidence=ISO] [GO:0042493 "response to drug" evidence=IEP]
[GO:0042803 "protein homodimerization activity" evidence=ISO]
[GO:0042826 "histone deacetylase binding" evidence=ISO] [GO:0043065
"positive regulation of apoptotic process" evidence=ISO] [GO:0043130
"ubiquitin binding" evidence=ISO] [GO:0043234 "protein complex"
evidence=ISO] [GO:0043565 "sequence-specific DNA binding"
evidence=IDA] [GO:0043566 "structure-specific DNA binding"
evidence=IDA] [GO:0045070 "positive regulation of viral genome
replication" evidence=ISO] [GO:0045870 "positive regulation of
retroviral genome replication" evidence=ISO] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=ISO] [GO:0046982 "protein heterodimerization activity"
evidence=ISO] [GO:0071107 "response to parathyroid hormone stimulus"
evidence=IEP] [GO:0000228 "nuclear chromosome" evidence=ISO]
[GO:0005814 "centriole" evidence=ISO] InterPro:IPR001241
InterPro:IPR002205 InterPro:IPR003594 InterPro:IPR012542
InterPro:IPR013506 InterPro:IPR013757 InterPro:IPR013758
InterPro:IPR013759 InterPro:IPR013760 InterPro:IPR018522
Pfam:PF00204 Pfam:PF00521 Pfam:PF02518 Pfam:PF08070 PRINTS:PR00418
PROSITE:PS00177 SMART:SM00387 SMART:SM00433 SMART:SM00434
Pfam:PF01751 RGD:62048 InterPro:IPR006171 GO:GO:0005524
GO:GO:0005654 GO:GO:0005730 GO:GO:0005814 GO:GO:0042493
GO:GO:0000287 GO:GO:0008144 GO:GO:0007568 GO:GO:0043565
GO:GO:0045944 GO:GO:0003682 GO:GO:0040016 GO:GO:0006974
GO:GO:0006261 GO:GO:0008301 GO:GO:0043065 GO:GO:0030263
Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0006266 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211
Gene3D:3.30.1360.40 InterPro:IPR024946 GO:GO:0000819 GO:GO:0006312
GO:GO:0009330 GO:GO:0070683 GO:GO:0000712 GO:GO:0071107
GO:GO:0000795 GO:GO:0006265 GO:GO:0043566 GO:GO:0003918
Gene3D:3.90.199.10 SUPFAM:SSF56719 Gene3D:1.10.268.10 eggNOG:COG0187
Gene3D:3.40.50.670 PROSITE:PS50880 KO:K03164 CTD:7153
HOGENOM:HOG000216693 HOVERGEN:HBG052998 OrthoDB:EOG4KWJS0
GO:GO:0045870 EMBL:Z46372 EMBL:Z19552 EMBL:Z29676 IPI:IPI00193944
PIR:A48536 PIR:JN0598 RefSeq:NP_071519.2 UniGene:Rn.90996
ProteinModelPortal:P41516 SMR:P41516 STRING:P41516 PRIDE:P41516
GeneID:360243 KEGG:rno:360243 BindingDB:P41516 ChEMBL:CHEMBL3400
NextBio:672745 ArrayExpress:P41516 Genevestigator:P41516
Uniprot:P41516
Length = 1526
Score = 270 (100.1 bits), Expect = 8.1e-27, Sum P(3) = 8.1e-27
Identities = 77/228 (33%), Positives = 114/228 (50%)
Query: 394 DCSSTTPEESEIFIVEGDSA-----GGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYK 448
D S E + + EGDSA G GRD+ + PLRGKILNV + +
Sbjct: 444 DAGSRNSAECTLILTEGDSAKTLAVSGLGVVGRDK--YGVFPLRGKILNVREASHKQIME 501
Query: 449 NEEIQNLIRALGLGVK----GEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQK 504
N EI N+I+ +GL K ED K LRY KI+I+TD D DG+HI+ LL+ F +
Sbjct: 502 NAEINNIIKIVGLQYKKNYEDEDSLK-TLRYGKIMIMTDQDQDGSHIKGLLINFIHHNWP 560
Query: 505 TLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPV 564
+L + + P+ KV + KQ Y E ++ KS+ P++ + ++ +KGLG
Sbjct: 561 SLLRHRFLEEFITPIVKVSKNKQEIAFYSLPEFEEWKSTNPNHKKWKVKYYKGLGTSTSK 620
Query: 565 QLWETTLNPEQRML--KQLVIEDAAEANVVFSSLMGARVDTRKELIQN 610
+ E N ++ + K ED A ++ FS +VD RKE + N
Sbjct: 621 EAKEYFANMKRHRIQFKYSGPEDDAAISLAFSK---KQVDDRKEWLTN 665
Score = 86 (35.3 bits), Expect = 8.1e-27, Sum P(3) = 8.1e-27
Identities = 20/50 (40%), Positives = 30/50 (60%)
Query: 10 GLHHLVYEILDNAVDEAQAG-YASNIEVALLADNSVSVADNGRGIPIDLH 58
GL+ + EIL NA D Q S I V ++ +N +S+ +NG+GIP+ H
Sbjct: 79 GLYKIFDEILVNAADNKQRDPKMSCIRVTMMRNNLISIWNNGKGIPVVEH 128
Score = 79 (32.9 bits), Expect = 8.1e-27, Sum P(3) = 8.1e-27
Identities = 20/75 (26%), Positives = 37/75 (49%)
Query: 252 LGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKD-ISLSGEHVREGLTCIISV 310
+ + NSI T GG H++ V + L + KK K+K +++ + V+ + +
Sbjct: 309 ISFVNSIATSKGGRHVDYVADQIVSKLVDVVKK----KNKGGVAVKADQVKNHMWIFGNA 364
Query: 311 RVPNPEFEGQTKTRL 325
+ NP F+ QTK +
Sbjct: 365 VIENPTFDSQTKENM 379
>MGI|MGI:98790 [details] [associations]
symbol:Top2a "topoisomerase (DNA) II alpha" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0000287 "magnesium ion binding" evidence=ISO] [GO:0000712
"resolution of meiotic recombination intermediates" evidence=IBA]
[GO:0000793 "condensed chromosome" evidence=IDA] [GO:0000795
"synaptonemal complex" evidence=IBA] [GO:0000819 "sister chromatid
segregation" evidence=IBA] [GO:0003677 "DNA binding" evidence=ISO]
[GO:0003682 "chromatin binding" evidence=ISO] [GO:0003916 "DNA
topoisomerase activity" evidence=ISO] [GO:0003918 "DNA
topoisomerase type II (ATP-hydrolyzing) activity"
evidence=ISO;IGI;IDA] [GO:0005080 "protein kinase C binding"
evidence=ISO] [GO:0005524 "ATP binding" evidence=ISO] [GO:0005634
"nucleus" evidence=ISO;IDA] [GO:0005654 "nucleoplasm" evidence=ISO]
[GO:0005694 "chromosome" evidence=IEA] [GO:0005730 "nucleolus"
evidence=ISO;IDA] [GO:0006200 "ATP catabolic process"
evidence=IGI;IDA] [GO:0006259 "DNA metabolic process" evidence=IEA]
[GO:0006261 "DNA-dependent DNA replication" evidence=IBA]
[GO:0006265 "DNA topological change" evidence=ISO;IDA] [GO:0006266
"DNA ligation" evidence=ISO] [GO:0006312 "mitotic recombination"
evidence=IBA] [GO:0006974 "response to DNA damage stimulus"
evidence=ISO] [GO:0007059 "chromosome segregation"
evidence=ISO;IMP;IDA] [GO:0008022 "protein C-terminus binding"
evidence=ISO] [GO:0008094 "DNA-dependent ATPase activity"
evidence=ISO] [GO:0008144 "drug binding" evidence=ISO] [GO:0008301
"DNA binding, bending" evidence=ISO] [GO:0009330 "DNA topoisomerase
complex (ATP-hydrolyzing)" evidence=ISO] [GO:0016853 "isomerase
activity" evidence=IEA] [GO:0019899 "enzyme binding" evidence=ISO]
[GO:0030261 "chromosome condensation" evidence=IMP] [GO:0030263
"apoptotic chromosome condensation" evidence=ISO] [GO:0040016
"embryonic cleavage" evidence=IMP] [GO:0042803 "protein
homodimerization activity" evidence=ISO] [GO:0042826 "histone
deacetylase binding" evidence=ISO] [GO:0043065 "positive regulation
of apoptotic process" evidence=ISO] [GO:0043130 "ubiquitin binding"
evidence=ISO] [GO:0043234 "protein complex" evidence=ISO]
[GO:0043565 "sequence-specific DNA binding" evidence=ISO]
[GO:0043566 "structure-specific DNA binding" evidence=ISO]
[GO:0044774 "mitotic DNA integrity checkpoint" evidence=IBA]
[GO:0045070 "positive regulation of viral genome replication"
evidence=ISO] [GO:0045870 "positive regulation of retroviral genome
replication" evidence=ISO] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0046982 "protein
heterodimerization activity" evidence=ISO] InterPro:IPR001241
InterPro:IPR002205 InterPro:IPR003594 InterPro:IPR012542
InterPro:IPR013506 InterPro:IPR013757 InterPro:IPR013758
InterPro:IPR013759 InterPro:IPR013760 InterPro:IPR018522
Pfam:PF00204 Pfam:PF00521 Pfam:PF02518 Pfam:PF08070 PRINTS:PR00418
PROSITE:PS00177 SMART:SM00387 SMART:SM00433 SMART:SM00434
Pfam:PF01751 MGI:MGI:98790 InterPro:IPR006171 GO:GO:0005524
GO:GO:0005654 GO:GO:0005730 GO:GO:0005814 GO:GO:0042493
GO:GO:0000287 GO:GO:0008144 GO:GO:0007568 GO:GO:0043565
GO:GO:0045944 GO:GO:0003682 GO:GO:0040016 GO:GO:0006974
GO:GO:0006261 GO:GO:0008301 GO:GO:0043065 GO:GO:0030263
Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030261 GO:GO:0006266
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 Gene3D:3.30.1360.40 InterPro:IPR024946
GO:GO:0000819 GO:GO:0006312 GO:GO:0009330 GO:GO:0070683
GO:GO:0000712 GO:GO:0071107 EMBL:AL591067 GO:GO:0000795
GO:GO:0006265 GO:GO:0043566 GO:GO:0003918 Gene3D:3.90.199.10
SUPFAM:SSF56719 Gene3D:1.10.268.10 eggNOG:COG0187
Gene3D:3.40.50.670 PROSITE:PS50880 KO:K03164 CTD:7153
HOGENOM:HOG000216693 HOVERGEN:HBG052998 OrthoDB:EOG4KWJS0
GO:GO:0045870 EMBL:D12513 EMBL:U01915 IPI:IPI00122223 PIR:JS0703
RefSeq:NP_035753.2 UniGene:Mm.4237 ProteinModelPortal:Q01320
SMR:Q01320 IntAct:Q01320 STRING:Q01320 PhosphoSite:Q01320
PaxDb:Q01320 PRIDE:Q01320 Ensembl:ENSMUST00000068031 GeneID:21973
KEGG:mmu:21973 UCSC:uc007lid.1 GeneTree:ENSGT00390000016222
InParanoid:Q01320 OMA:MFKQTWM BindingDB:Q01320 ChEMBL:CHEMBL3586
ChiTaRS:TOP2A NextBio:301670 Bgee:Q01320 CleanEx:MM_TOP2A
Genevestigator:Q01320 GermOnline:ENSMUSG00000020914 Uniprot:Q01320
Length = 1528
Score = 269 (99.8 bits), Expect = 2.7e-26, Sum P(3) = 2.7e-26
Identities = 77/228 (33%), Positives = 114/228 (50%)
Query: 394 DCSSTTPEESEIFIVEGDSA-----GGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYK 448
D S E + + EGDSA G GRD+ + PLRGKILNV + +
Sbjct: 445 DAGSRNSTECTLILTEGDSAKTLAVSGLGVVGRDK--YGVFPLRGKILNVREASHKQIME 502
Query: 449 NEEIQNLIRALGLGVK----GEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQK 504
N EI N+I+ +GL K ED K LRY KI+I+TD D DG+HI+ LL+ F +
Sbjct: 503 NAEINNIIKIVGLQYKKNYEDEDSLK-TLRYGKIMIMTDQDQDGSHIKGLLINFIHHNWP 561
Query: 505 TLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPV 564
+L + + P+ KV + KQ Y E ++ KSS P++ + ++ +KGLG
Sbjct: 562 SLLRHRFLEEFITPIVKVSKNKQEIAFYSLPEFEEWKSSTPNHKKWKVKYYKGLGTSTSK 621
Query: 565 QLWETTLNPEQRML--KQLVIEDAAEANVVFSSLMGARVDTRKELIQN 610
+ E + ++ + K ED A ++ FS +VD RKE + N
Sbjct: 622 EAKEYFADMKRHRIQFKYSGPEDDAAISLAFSK---KQVDDRKEWLTN 666
Score = 85 (35.0 bits), Expect = 2.7e-26, Sum P(3) = 2.7e-26
Identities = 20/75 (26%), Positives = 37/75 (49%)
Query: 252 LGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKD-ISLSGEHVREGLTCIISV 310
+ + NSI T GG H++ V + L + KK K+K +++ V+ + ++
Sbjct: 310 ISFVNSIATSKGGRHVDYVADQIVSKLVDVVKK----KNKGGVAVKAHQVKNHMWIFVNA 365
Query: 311 RVPNPEFEGQTKTRL 325
+ NP F+ QTK +
Sbjct: 366 LIENPTFDSQTKENM 380
Score = 76 (31.8 bits), Expect = 2.7e-26, Sum P(3) = 2.7e-26
Identities = 21/51 (41%), Positives = 30/51 (58%)
Query: 10 GLHHLVYEILDNAVDEAQAG-YASNIEVALLADNSV-SVADNGRGIPIDLH 58
GL+ + EIL NA D Q S I V + +N+V S+ +NG+GIP+ H
Sbjct: 79 GLYKIFDEILVNAADNKQRDPKMSCIRVTIDPENNVISIWNNGKGIPVVEH 129
>UNIPROTKB|F1Q2M4 [details] [associations]
symbol:TOP2A "DNA topoisomerase 2" species:9615 "Canis
lupus familiaris" [GO:0003918 "DNA topoisomerase type II
(ATP-hydrolyzing) activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006265 "DNA topological change" evidence=IEA]
[GO:0005694 "chromosome" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR001241 InterPro:IPR002205
InterPro:IPR003594 InterPro:IPR012542 InterPro:IPR013506
InterPro:IPR013757 InterPro:IPR013758 InterPro:IPR013759
InterPro:IPR013760 InterPro:IPR018522 Pfam:PF00204 Pfam:PF00521
Pfam:PF02518 Pfam:PF08070 PRINTS:PR00418 PROSITE:PS00177
SMART:SM00387 SMART:SM00433 SMART:SM00434 Pfam:PF01751
InterPro:IPR006171 GO:GO:0005524 GO:GO:0005634 GO:GO:0005694
Gene3D:3.30.565.10 SUPFAM:SSF55874 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211
Gene3D:3.30.1360.40 InterPro:IPR024946 GO:GO:0006265 GO:GO:0003918
Gene3D:3.90.199.10 SUPFAM:SSF56719 Gene3D:1.10.268.10
Gene3D:3.40.50.670 GeneTree:ENSGT00390000016222 EMBL:AAEX03006463
Ensembl:ENSCAFT00000025539 Uniprot:F1Q2M4
Length = 1533
Score = 305 (112.4 bits), Expect = 4.3e-26, Sum P(2) = 4.3e-26
Identities = 100/370 (27%), Positives = 167/370 (45%)
Query: 252 LGYANSIRTIDGGTHIEGVKASL-TRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISV 310
+ + NSI T GG H++ + + T+ ++ + KK+K +++ V+ + ++
Sbjct: 311 ISFVNSIATSKGGRHVDYIADQIVTKLVDVVKKKNKG----GVAVKAHQVKNHMWIFVNA 366
Query: 311 RVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVXXXXXXXXXXXXXXXXXX 370
+ NP F+ QTK + +V+ S + ++++
Sbjct: 367 LIENPTFDSQTKENM-TLQVKSF--GSTCQLSEKFIKAATGCGIVESILNWVKFKAQIQL 423
Query: 371 XXXXXXVRQKSVLRSSSLPGKLADCSST---TPEESEIFIVEGDSA-----GGSAKQGRD 422
V+ R +P KL D + E + + EGDSA G GRD
Sbjct: 424 NKKCSAVKHN---RIKGIP-KLDDANDAGGRNSNECTLILTEGDSAKTLAVSGLGVVGRD 479
Query: 423 RRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVK----GEDFKKEALRYHKI 478
+ + PLRGKILNV + +N EI N+I+ +GL K ED K LRY KI
Sbjct: 480 K--YGVFPLRGKILNVREASHKQIMENAEINNIIKIVGLQYKKNYDDEDSLK-TLRYGKI 536
Query: 479 IILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELK 538
+I+TD D DG+HI+ LL+ F + +L + + P+ KV + KQ Y E +
Sbjct: 537 MIMTDQDQDGSHIKGLLINFIHHNWPSLLRHRFLEEFITPIVKVSKNKQEMAFYSLPEFE 596
Query: 539 KVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRML--KQLVIEDAAEANVVFSSL 596
+ KSS P++ + ++ +KGLG + E N ++ + K ED A ++ FS
Sbjct: 597 EWKSSTPNHKKWKVKYYKGLGTSTSKEAKEYFANMKRHRIQFKYSGPEDDAAISLAFSK- 655
Query: 597 MGARVDTRKE 606
++D RKE
Sbjct: 656 --KQIDDRKE 663
Score = 75 (31.5 bits), Expect = 4.3e-26, Sum P(2) = 4.3e-26
Identities = 20/51 (39%), Positives = 30/51 (58%)
Query: 10 GLHHLVYEILDNAVDEAQAG-YASNIEVALLADNS-VSVADNGRGIPIDLH 58
GL+ + EIL NA D Q S I V + +N+ +S+ +NG+GIP+ H
Sbjct: 80 GLYKIFDEILVNAADNKQRDPKMSCIRVTIDPENNLISIWNNGKGIPVVEH 130
>UNIPROTKB|J9PAY8 [details] [associations]
symbol:TOP2A "DNA topoisomerase 2" species:9615 "Canis
lupus familiaris" [GO:0003918 "DNA topoisomerase type II
(ATP-hydrolyzing) activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006265 "DNA topological change" evidence=IEA]
[GO:0005694 "chromosome" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR001241 InterPro:IPR002205
InterPro:IPR003594 InterPro:IPR012542 InterPro:IPR013506
InterPro:IPR013757 InterPro:IPR013758 InterPro:IPR013759
InterPro:IPR013760 InterPro:IPR018522 Pfam:PF00204 Pfam:PF00521
Pfam:PF02518 Pfam:PF08070 PRINTS:PR00418 PROSITE:PS00177
SMART:SM00387 SMART:SM00433 SMART:SM00434 Pfam:PF01751
InterPro:IPR006171 GO:GO:0005524 GO:GO:0005634 GO:GO:0005694
Gene3D:3.30.565.10 SUPFAM:SSF55874 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211
Gene3D:3.30.1360.40 InterPro:IPR024946 GO:GO:0006265 GO:GO:0003918
Gene3D:3.90.199.10 SUPFAM:SSF56719 Gene3D:1.10.268.10
Gene3D:3.40.50.670 GeneTree:ENSGT00390000016222 OMA:MFKQTWM
EMBL:AAEX03006463 Ensembl:ENSCAFT00000046104 Uniprot:J9PAY8
Length = 1541
Score = 305 (112.4 bits), Expect = 4.4e-26, Sum P(2) = 4.4e-26
Identities = 100/370 (27%), Positives = 167/370 (45%)
Query: 252 LGYANSIRTIDGGTHIEGVKASL-TRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISV 310
+ + NSI T GG H++ + + T+ ++ + KK+K +++ V+ + ++
Sbjct: 320 ISFVNSIATSKGGRHVDYIADQIVTKLVDVVKKKNKG----GVAVKAHQVKNHMWIFVNA 375
Query: 311 RVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVXXXXXXXXXXXXXXXXXX 370
+ NP F+ QTK + +V+ S + ++++
Sbjct: 376 LIENPTFDSQTKENM-TLQVKSF--GSTCQLSEKFIKAATGCGIVESILNWVKFKAQIQL 432
Query: 371 XXXXXXVRQKSVLRSSSLPGKLADCSST---TPEESEIFIVEGDSA-----GGSAKQGRD 422
V+ R +P KL D + E + + EGDSA G GRD
Sbjct: 433 NKKCSAVKHN---RIKGIP-KLDDANDAGGRNSNECTLILTEGDSAKTLAVSGLGVVGRD 488
Query: 423 RRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVK----GEDFKKEALRYHKI 478
+ + PLRGKILNV + +N EI N+I+ +GL K ED K LRY KI
Sbjct: 489 K--YGVFPLRGKILNVREASHKQIMENAEINNIIKIVGLQYKKNYDDEDSLK-TLRYGKI 545
Query: 479 IILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELK 538
+I+TD D DG+HI+ LL+ F + +L + + P+ KV + KQ Y E +
Sbjct: 546 MIMTDQDQDGSHIKGLLINFIHHNWPSLLRHRFLEEFITPIVKVSKNKQEMAFYSLPEFE 605
Query: 539 KVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRML--KQLVIEDAAEANVVFSSL 596
+ KSS P++ + ++ +KGLG + E N ++ + K ED A ++ FS
Sbjct: 606 EWKSSTPNHKKWKVKYYKGLGTSTSKEAKEYFANMKRHRIQFKYSGPEDDAAISLAFSK- 664
Query: 597 MGARVDTRKE 606
++D RKE
Sbjct: 665 --KQIDDRKE 672
Score = 75 (31.5 bits), Expect = 4.4e-26, Sum P(2) = 4.4e-26
Identities = 20/51 (39%), Positives = 30/51 (58%)
Query: 10 GLHHLVYEILDNAVDEAQAG-YASNIEVALLADNS-VSVADNGRGIPIDLH 58
GL+ + EIL NA D Q S I V + +N+ +S+ +NG+GIP+ H
Sbjct: 89 GLYKIFDEILVNAADNKQRDPKMSCIRVTIDPENNLISIWNNGKGIPVVEH 139
>UNIPROTKB|P11388 [details] [associations]
symbol:TOP2A "DNA topoisomerase 2-alpha" species:9606 "Homo
sapiens" [GO:0005524 "ATP binding" evidence=IEA] [GO:0040016
"embryonic cleavage" evidence=IEA] [GO:0045944 "positive regulation
of transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0000712 "resolution of meiotic recombination intermediates"
evidence=IBA] [GO:0000795 "synaptonemal complex" evidence=IBA]
[GO:0000819 "sister chromatid segregation" evidence=IBA]
[GO:0006261 "DNA-dependent DNA replication" evidence=IBA]
[GO:0006265 "DNA topological change" evidence=IDA;IBA] [GO:0006312
"mitotic recombination" evidence=IBA] [GO:0009295 "nucleoid"
evidence=IBA] [GO:0048015 "phosphatidylinositol-mediated signaling"
evidence=NAS] [GO:0006260 "DNA replication" evidence=NAS]
[GO:0008094 "DNA-dependent ATPase activity" evidence=IDA]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0043234 "protein
complex" evidence=IPI] [GO:0003918 "DNA topoisomerase type II
(ATP-hydrolyzing) activity" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0008022 "protein C-terminus binding"
evidence=IPI] [GO:0003682 "chromatin binding" evidence=IDA]
[GO:0005654 "nucleoplasm" evidence=IDA;TAS] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0000228 "nuclear chromosome" evidence=IDA]
[GO:0005814 "centriole" evidence=IDA] [GO:0042826 "histone
deacetylase binding" evidence=IPI] [GO:0007059 "chromosome
segregation" evidence=IMP] [GO:0009330 "DNA topoisomerase complex
(ATP-hydrolyzing)" evidence=IDA] [GO:0019899 "enzyme binding"
evidence=IPI] [GO:0030263 "apoptotic chromosome condensation"
evidence=IDA] [GO:0019035 "viral integration complex" evidence=NAS]
[GO:0045070 "positive regulation of viral genome replication"
evidence=IMP] [GO:0045870 "positive regulation of retroviral genome
replication" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0042803 "protein homodimerization activity"
evidence=IPI] [GO:0046982 "protein heterodimerization activity"
evidence=IPI] [GO:0006266 "DNA ligation" evidence=IDA] [GO:0008144
"drug binding" evidence=IDA] [GO:0006974 "response to DNA damage
stimulus" evidence=IDA] [GO:0043065 "positive regulation of
apoptotic process" evidence=IDA] [GO:0005080 "protein kinase C
binding" evidence=IPI] [GO:0006281 "DNA repair" evidence=NAS]
[GO:0043130 "ubiquitin binding" evidence=IMP] [GO:0008301 "DNA
binding, bending" evidence=IDA] [GO:0000287 "magnesium ion binding"
evidence=IDA] [GO:0000278 "mitotic cell cycle" evidence=TAS]
InterPro:IPR001241 InterPro:IPR002205 InterPro:IPR003594
InterPro:IPR012542 InterPro:IPR013506 InterPro:IPR013757
InterPro:IPR013758 InterPro:IPR013759 InterPro:IPR013760
InterPro:IPR018522 Pfam:PF00204 Pfam:PF00521 Pfam:PF02518
Pfam:PF08070 PRINTS:PR00418 PROSITE:PS00177 SMART:SM00387
SMART:SM00433 SMART:SM00434 Pfam:PF01751 InterPro:IPR006171
GO:GO:0005524 GO:GO:0005737 Reactome:REACT_115566 GO:GO:0005654
GO:GO:0005730 GO:GO:0042493 GO:GO:0000287 GO:GO:0008144
GO:GO:0007568 EMBL:CH471152 GO:GO:0043565 GO:GO:0006281
GO:GO:0045944 GO:GO:0003682 GO:GO:0040016 GO:GO:0006261
DrugBank:DB01204 GO:GO:0008301 GO:GO:0043065 GO:GO:0030263
DrugBank:DB00537 GO:GO:0048015 Gene3D:3.30.565.10 SUPFAM:SSF55874
DrugBank:DB01044 DrugBank:DB04967 GO:GO:0006266 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211
Gene3D:3.30.1360.40 InterPro:IPR024946 GO:GO:0000819 GO:GO:0006312
GO:GO:0043130 GO:GO:0009330 GO:GO:0070683 GO:GO:0000712
DrugBank:DB00445 GO:GO:0071107 DrugBank:DB00467 DrugBank:DB01137
DrugBank:DB00978 DrugBank:DB01059 DrugBank:DB01165 DrugBank:DB00487
DrugBank:DB00444 DrugBank:DB00997 DrugBank:DB00773 GO:GO:0000795
GO:GO:0006265 GO:GO:0043566 DrugBank:DB00276 GO:GO:0003918
Gene3D:3.90.199.10 SUPFAM:SSF56719 Gene3D:1.10.268.10
eggNOG:COG0187 Gene3D:3.40.50.670 PROSITE:PS50880 EMBL:AC080112
KO:K03164 CTD:7153 HOVERGEN:HBG052998 EMBL:J04088 EMBL:AF071747
EMBL:AF071738 EMBL:AF071739 EMBL:AF071740 EMBL:AF071741
EMBL:AF071742 EMBL:AF071743 EMBL:AF071744 EMBL:AF071745
EMBL:AF071746 EMBL:AJ011741 EMBL:AJ011742 EMBL:AJ011743
EMBL:AJ011744 EMBL:AJ011745 EMBL:AJ011746 EMBL:AJ011747
EMBL:AJ011748 EMBL:AJ011749 EMBL:AJ011750 EMBL:AJ011751
EMBL:AJ011752 EMBL:AJ011753 EMBL:AJ011754 EMBL:AJ011755
EMBL:AJ011756 EMBL:AJ011757 EMBL:AJ011758 EMBL:AF285157
EMBL:AF285158 EMBL:BC140791 EMBL:AF285159 EMBL:AF069522
EMBL:AF064590 IPI:IPI00414101 IPI:IPI00478232 IPI:IPI00879004
IPI:IPI01011132 PIR:A40493 RefSeq:NP_001058.2 UniGene:Hs.156346
PDB:1LWZ PDB:1ZXM PDB:1ZXN PDB:4FM9 PDBsum:1LWZ PDBsum:1ZXM
PDBsum:1ZXN PDBsum:4FM9 ProteinModelPortal:P11388 SMR:P11388
DIP:DIP-33887N IntAct:P11388 MINT:MINT-98770 STRING:P11388
PhosphoSite:P11388 DMDM:13959709 UCD-2DPAGE:P11388 PaxDb:P11388
PRIDE:P11388 Ensembl:ENST00000423485 GeneID:7153 KEGG:hsa:7153
UCSC:uc002huq.3 GeneCards:GC17M038544 H-InvDB:HIX0013797
HGNC:HGNC:11989 HPA:CAB002448 HPA:HPA006458 HPA:HPA026773
MIM:126430 neXtProt:NX_P11388 PharmGKB:PA354 OrthoDB:EOG4KWJS0
BRENDA:5.99.1.3 BindingDB:P11388 ChEMBL:CHEMBL1806 DrugBank:DB00380
DrugBank:DB04576 DrugBank:DB01177 DrugBank:DB00218 DrugBank:DB01179
DrugBank:DB01208 DrugBank:DB00685 DrugBank:DB00385
EvolutionaryTrace:P11388 GenomeRNAi:7153 NextBio:27992
ArrayExpress:P11388 Bgee:P11388 CleanEx:HS_TOP2A
Genevestigator:P11388 GO:GO:0045870 Uniprot:P11388
Length = 1531
Score = 267 (99.0 bits), Expect = 4.6e-26, Sum P(3) = 4.6e-26
Identities = 75/228 (32%), Positives = 113/228 (49%)
Query: 394 DCSSTTPEESEIFIVEGDSA-----GGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYK 448
D E + + EGDSA G GRD+ + PLRGKILNV + +
Sbjct: 446 DAGGRNSTECTLILTEGDSAKTLAVSGLGVVGRDK--YGVFPLRGKILNVREASHKQIME 503
Query: 449 NEEIQNLIRALGLGVK----GEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQK 504
N EI N+I+ +GL K ED K LRY KI+I+TD D DG+HI+ LL+ F +
Sbjct: 504 NAEINNIIKIVGLQYKKNYEDEDSLK-TLRYGKIMIMTDQDQDGSHIKGLLINFIHHNWP 562
Query: 505 TLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPV 564
+L + + P+ KV + KQ Y E ++ KSS P++ + ++ +KGLG
Sbjct: 563 SLLRHRFLEEFITPIVKVSKNKQEMAFYSLPEFEEWKSSTPNHKKWKVKYYKGLGTSTSK 622
Query: 565 QLWETTLNPEQRML--KQLVIEDAAEANVVFSSLMGARVDTRKELIQN 610
+ E + ++ + K ED A ++ FS ++D RKE + N
Sbjct: 623 EAKEYFADMKRHRIQFKYSGPEDDAAISLAFSK---KQIDDRKEWLTN 667
Score = 86 (35.3 bits), Expect = 4.6e-26, Sum P(3) = 4.6e-26
Identities = 19/75 (25%), Positives = 39/75 (52%)
Query: 252 LGYANSIRTIDGGTHIEGVKASL-TRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISV 310
+ + NSI T GG H++ V + T+ ++ + KK+K +++ V+ + ++
Sbjct: 311 ISFVNSIATSKGGRHVDYVADQIVTKLVDVVKKKNKG----GVAVKAHQVKNHMWIFVNA 366
Query: 311 RVPNPEFEGQTKTRL 325
+ NP F+ QTK +
Sbjct: 367 LIENPTFDSQTKENM 381
Score = 75 (31.5 bits), Expect = 4.6e-26, Sum P(3) = 4.6e-26
Identities = 20/51 (39%), Positives = 30/51 (58%)
Query: 10 GLHHLVYEILDNAVDEAQAG-YASNIEVALLADNS-VSVADNGRGIPIDLH 58
GL+ + EIL NA D Q S I V + +N+ +S+ +NG+GIP+ H
Sbjct: 80 GLYKIFDEILVNAADNKQRDPKMSCIRVTIDPENNLISIWNNGKGIPVVEH 130
>UNIPROTKB|P41515 [details] [associations]
symbol:TOP2A "DNA topoisomerase 2-alpha" species:10029
"Cricetulus griseus" [GO:0000287 "magnesium ion binding"
evidence=ISS] [GO:0003918 "DNA topoisomerase type II
(ATP-hydrolyzing) activity" evidence=ISS] [GO:0006265 "DNA
topological change" evidence=ISS] [GO:0008301 "DNA binding,
bending" evidence=ISS] InterPro:IPR001241 InterPro:IPR002205
InterPro:IPR003594 InterPro:IPR012542 InterPro:IPR013506
InterPro:IPR013757 InterPro:IPR013758 InterPro:IPR013759
InterPro:IPR013760 InterPro:IPR018522 Pfam:PF00204 Pfam:PF00521
Pfam:PF02518 Pfam:PF08070 PRINTS:PR00418 PROSITE:PS00177
SMART:SM00387 SMART:SM00433 SMART:SM00434 Pfam:PF01751
InterPro:IPR006171 GO:GO:0005524 GO:GO:0005634 GO:GO:0005694
GO:GO:0000287 GO:GO:0008301 Gene3D:3.30.565.10 SUPFAM:SSF55874
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 Gene3D:3.30.1360.40 InterPro:IPR024946
GO:GO:0006265 GO:GO:0003918 Gene3D:3.90.199.10 SUPFAM:SSF56719
Gene3D:1.10.268.10 Gene3D:3.40.50.670 PROSITE:PS50880 CTD:7153
HOVERGEN:HBG052998 EMBL:L04607 PIR:A44406 RefSeq:NP_001233667.1
ProteinModelPortal:P41515 SMR:P41515 GeneID:100689304
Uniprot:P41515
Length = 1526
Score = 265 (98.3 bits), Expect = 9.7e-26, Sum P(3) = 9.7e-26
Identities = 76/224 (33%), Positives = 112/224 (50%)
Query: 394 DCSSTTPEESEIFIVEGDSA-----GGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYK 448
D S E + + EGDSA G GRD+ + PLRGKILNV + +
Sbjct: 445 DAGSRNSTECTLILTEGDSAKTLAVSGLGVVGRDK--YGVFPLRGKILNVREASHKQIME 502
Query: 449 NEEIQNLIRALGLGVK----GEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQK 504
N EI N+I+ +GL K ED K LRY KI+I+TD D DG+HI+ LL+ F +
Sbjct: 503 NAEINNIIKIVGLQYKKNYEDEDSLK-TLRYGKIMIMTDQDQDGSHIKGLLINFIHHNWP 561
Query: 505 TLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPV 564
+L + + P+ KV + KQ Y E ++ KSS P++ + ++ +KGLG
Sbjct: 562 SLLRHRFLEEFITPIVKVSKNKQELAFYSLPEFEEWKSSTPNHKKWKVKYYKGLGTSTSK 621
Query: 565 QLWETTLNPEQRML--KQLVIEDAAEANVVFSSLMGARVDTRKE 606
+ E + ++ + K ED A ++ FS +VD RKE
Sbjct: 622 EAKEYFADMKRHRIQFKYSGPEDDAAISLAFSK---KQVDDRKE 662
Score = 85 (35.0 bits), Expect = 9.7e-26, Sum P(3) = 9.7e-26
Identities = 20/75 (26%), Positives = 37/75 (49%)
Query: 252 LGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKD-ISLSGEHVREGLTCIISV 310
+ + NSI T GG H++ V + L + KK K+K +++ V+ + ++
Sbjct: 310 ISFVNSIATSKGGRHVDYVADQIVSKLVDVVKK----KNKGGVAVKAHQVKNHMWIFVNA 365
Query: 311 RVPNPEFEGQTKTRL 325
+ NP F+ QTK +
Sbjct: 366 LIENPTFDSQTKENM 380
Score = 75 (31.5 bits), Expect = 9.7e-26, Sum P(3) = 9.7e-26
Identities = 20/51 (39%), Positives = 30/51 (58%)
Query: 10 GLHHLVYEILDNAVDEAQAG-YASNIEVALLADNS-VSVADNGRGIPIDLH 58
GL+ + EIL NA D Q S I V + +N+ +S+ +NG+GIP+ H
Sbjct: 79 GLYKIFDEILVNAADNKQRDPKMSCIRVTIDPENNLISIWNNGKGIPVVEH 129
>UNIPROTKB|Q8EYL9 [details] [associations]
symbol:LA_4194 "DNA gyrase subunit B" species:189518
"Leptospira interrogans serovar Lai str. 56601" [GO:0003918 "DNA
topoisomerase type II (ATP-hydrolyzing) activity" evidence=IBA]
[GO:0006261 "DNA-dependent DNA replication" evidence=IBA]
[GO:0006265 "DNA topological change" evidence=IBA] [GO:0007059
"chromosome segregation" evidence=IBA] [GO:0009295 "nucleoid"
evidence=IBA] InterPro:IPR001241 InterPro:IPR003594
InterPro:IPR013506 InterPro:IPR013759 InterPro:IPR013760
InterPro:IPR018522 Pfam:PF00204 Pfam:PF02518 PRINTS:PR00418
PROSITE:PS00177 SMART:SM00387 SMART:SM00433 Pfam:PF01751
InterPro:IPR006171 GO:GO:0005524 GO:GO:0005694 GO:GO:0007059
GO:GO:0006261 Gene3D:3.30.565.10 SUPFAM:SSF55874 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0009295
GO:GO:0006265 GO:GO:0003918 SUPFAM:SSF56719 KO:K02470
Gene3D:3.40.50.670 EMBL:AE010300 GenomeReviews:AE010300_GR
HSSP:P06786 RefSeq:NP_714374.1 ProteinModelPortal:Q8EYL9
GeneID:1153536 KEGG:lil:LA_4194 PATRIC:22389227
HOGENOM:HOG000040411 OMA:EATIESK ProtClustDB:CLSK575166
BioCyc:LINT189518:GJBB-3320-MONOMER Uniprot:Q8EYL9
Length = 711
Score = 307 (113.1 bits), Expect = 1.1e-25, Sum P(2) = 1.1e-25
Identities = 115/452 (25%), Positives = 204/452 (45%)
Query: 133 CHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNT-IAGRIRELAFLNPKLT--IALRKE 189
C++L D D+ ++ +++ A + DH T + + F N ++ + L K+
Sbjct: 218 CNLLTKDQIDKLSPLLKKTNMQELIEKASKEDHGTSVEFELNPKYFNNLDISFNVDLMKQ 277
Query: 190 D-SDPEKNQYN---EYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKD--VDGITIDLALQW 242
D ++ F G E+Y D+ H D+V ++ D G L L+
Sbjct: 278 YLQDIAMTNPGLEVQFVFKGKKEKYKFKKGLDEIFSHSDLVYYKMDYVAPGSASQLHLET 337
Query: 243 CSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVK-DKDISLSGEH-- 299
+ L + NSI GG+ IE ++ R + + KKS+ V +K + S
Sbjct: 338 YLVIGQNKNLTWVNSIFAPQGGSAIEYLE---NRICDEVRKKSQIVALEKKLKTSSTRND 394
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVXXXXXXX 359
VR ++ R+ NP F+ Q K+ L N ++ + + +V ++L ++++
Sbjct: 395 VRNCFHMYVNARLLNPRFKSQDKSYLIN-DLNEDIRNAVDKHLDKFIK-------KTGLL 446
Query: 360 XXXXXXXXXXXXXXXXXVRQKSVLRSS--SLPGKLADCSSTTPEESEIFIVEGDSAGGSA 417
QK + ++S ++P + +F+ EGDSA
Sbjct: 447 EEIKLQMEKRTQLKAFEDAQKGLKKASRMNIPKLMPPTGKQGDPGRVLFVAEGDSAIAGL 506
Query: 418 KQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHK 477
+ R+ + + PLRGK LN + A NEE++N++ +GL + + + L Y K
Sbjct: 507 RPARNPKLHGLFPLRGKPLNCKGLSIAKAIANEELKNIVAIVGLPLDQKVKSLDELNYEK 566
Query: 478 IIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVE-----RGKQVQYCY 532
+ I+TDAD DG IR+L+L+FFY Y LF+ G I++ PLY+V+ + K+ +C
Sbjct: 567 VSIITDADFDGYAIRSLMLSFFYEYWPELFELGFIHISSAPLYEVDVKFGDKKKETIFCI 626
Query: 533 DDAE----LKKVKSSFPSNALYSIQRFKGLGE 560
DD + +K+V+ + +R KGLGE
Sbjct: 627 DDKDYEDLIKRVEKG--GGEITRKKRNKGLGE 656
Score = 58 (25.5 bits), Expect = 1.1e-25, Sum P(2) = 1.1e-25
Identities = 13/24 (54%), Positives = 17/24 (70%)
Query: 32 SNIEVALLADNS-VSVADNGRGIP 54
S + V L +D V++ADNGRGIP
Sbjct: 100 SKLIVQLSSDRKCVTIADNGRGIP 123
>UNIPROTKB|O46374 [details] [associations]
symbol:TOP2A "DNA topoisomerase 2-alpha" species:9823 "Sus
scrofa" [GO:0008301 "DNA binding, bending" evidence=ISS]
[GO:0003918 "DNA topoisomerase type II (ATP-hydrolyzing) activity"
evidence=ISS] [GO:0000287 "magnesium ion binding" evidence=ISS]
[GO:0006265 "DNA topological change" evidence=ISS] [GO:0046982
"protein heterodimerization activity" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0045870 "positive regulation of
retroviral genome replication" evidence=IEA] [GO:0043130 "ubiquitin
binding" evidence=IEA] [GO:0043065 "positive regulation of
apoptotic process" evidence=IEA] [GO:0042826 "histone deacetylase
binding" evidence=IEA] [GO:0042803 "protein homodimerization
activity" evidence=IEA] [GO:0040016 "embryonic cleavage"
evidence=IEA] [GO:0030263 "apoptotic chromosome condensation"
evidence=IEA] [GO:0009330 "DNA topoisomerase complex
(ATP-hydrolyzing)" evidence=IEA] [GO:0008144 "drug binding"
evidence=IEA] [GO:0008022 "protein C-terminus binding"
evidence=IEA] [GO:0007059 "chromosome segregation" evidence=IEA]
[GO:0006974 "response to DNA damage stimulus" evidence=IEA]
[GO:0006266 "DNA ligation" evidence=IEA] [GO:0005814 "centriole"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0005654
"nucleoplasm" evidence=IEA] [GO:0005080 "protein kinase C binding"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0000793 "condensed chromosome" evidence=IEA] [GO:0000228
"nuclear chromosome" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR001241 InterPro:IPR002205
InterPro:IPR003594 InterPro:IPR012542 InterPro:IPR013506
InterPro:IPR013757 InterPro:IPR013758 InterPro:IPR013759
InterPro:IPR013760 InterPro:IPR018522 Pfam:PF00204 Pfam:PF00521
Pfam:PF02518 Pfam:PF08070 PRINTS:PR00418 PROSITE:PS00177
SMART:SM00387 SMART:SM00433 SMART:SM00434 Pfam:PF01751
InterPro:IPR006171 GO:GO:0005524 GO:GO:0007059 GO:GO:0005654
GO:GO:0005730 GO:GO:0005814 GO:GO:0000287 GO:GO:0008144
GO:GO:0045944 GO:GO:0003682 GO:GO:0040016 GO:GO:0006974
GO:GO:0008301 GO:GO:0043065 GO:GO:0030263 Gene3D:3.30.565.10
SUPFAM:SSF55874 GO:GO:0000793 GO:GO:0006266 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211
Gene3D:3.30.1360.40 InterPro:IPR024946 GO:GO:0000228 GO:GO:0009330
GO:GO:0006265 GO:GO:0003918 Gene3D:3.90.199.10 SUPFAM:SSF56719
Gene3D:1.10.268.10 eggNOG:COG0187 Gene3D:3.40.50.670
PROSITE:PS50880 KO:K03164 HOGENOM:HOG000216693 HOVERGEN:HBG052998
OrthoDB:EOG4KWJS0 GO:GO:0045870 GeneTree:ENSGT00390000016222
OMA:MFKQTWM EMBL:AB009387 RefSeq:NP_999049.1 UniGene:Ssc.14506
ProteinModelPortal:O46374 SMR:O46374 STRING:O46374 PRIDE:O46374
Ensembl:ENSSSCT00000019023 GeneID:396917 KEGG:ssc:396917
CTD:100038293 Uniprot:O46374
Length = 1533
Score = 297 (109.6 bits), Expect = 3.5e-25, Sum P(2) = 3.5e-25
Identities = 101/370 (27%), Positives = 165/370 (44%)
Query: 252 LGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKD-ISLSGEHVREGLTCIISV 310
+ + NSI T GG H++ V + L + KK K+K +++ V+ + ++
Sbjct: 311 ISFVNSIATSKGGRHVDYVADQIVAKLVDVVKK----KNKGGVAVKAHQVKNHMWIFVNA 366
Query: 311 RVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVXXXXXXXXXXXXXXXXXX 370
+ NP F+ QTK + +V+ S + ++++
Sbjct: 367 LIENPTFDSQTKENM-TLQVKSF--GSTCQLSEKFIKAAIGCGIVESILNWVKFKAQVQL 423
Query: 371 XXXXXXVRQKSVLRSSSLPGKLADCSST---TPEESEIFIVEGDSA-----GGSAKQGRD 422
V+ R +P KL D + E + + EGDSA G GRD
Sbjct: 424 NKKCSAVKHN---RIKGIP-KLDDANDAGGRNSTECTLILTEGDSAKTLAVSGLGVVGRD 479
Query: 423 RRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVK----GEDFKKEALRYHKI 478
+ + PLRGKILNV + +N EI N+I+ +GL K ED K LRY KI
Sbjct: 480 K--YGVFPLRGKILNVREASHKQIMENAEINNIIKIVGLQYKKNYEDEDSLK-TLRYGKI 536
Query: 479 IILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELK 538
+I+TD D DG+HI+ LL+ F + +L + + P+ KV + KQ Y E +
Sbjct: 537 MIMTDQDQDGSHIKGLLINFIHHNWPSLLRHRFLEEFITPIVKVSKNKQEMAFYSLPEFE 596
Query: 539 KVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRML--KQLVIEDAAEANVVFSSL 596
+ KSS P++ + ++ +KGLG + E + ++ + K ED A ++ FS
Sbjct: 597 EWKSSTPNHKKWKVKYYKGLGTSTSKEAKEYFADMKRHRIQFKYSGPEDDAAISLAFSK- 655
Query: 597 MGARVDTRKE 606
++D RKE
Sbjct: 656 --KQIDDRKE 663
Score = 75 (31.5 bits), Expect = 3.5e-25, Sum P(2) = 3.5e-25
Identities = 20/51 (39%), Positives = 30/51 (58%)
Query: 10 GLHHLVYEILDNAVDEAQAG-YASNIEVALLADNS-VSVADNGRGIPIDLH 58
GL+ + EIL NA D Q S I V + +N+ +S+ +NG+GIP+ H
Sbjct: 80 GLYKIFDEILVNAADNKQRDPKMSCIRVTIDPENNLISIWNNGKGIPVVEH 130
>UNIPROTKB|F1MDU7 [details] [associations]
symbol:TOP2A "DNA topoisomerase 2" species:9913 "Bos
taurus" [GO:0046982 "protein heterodimerization activity"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0045870
"positive regulation of retroviral genome replication"
evidence=IEA] [GO:0043130 "ubiquitin binding" evidence=IEA]
[GO:0043065 "positive regulation of apoptotic process"
evidence=IEA] [GO:0042826 "histone deacetylase binding"
evidence=IEA] [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0040016 "embryonic cleavage" evidence=IEA]
[GO:0030263 "apoptotic chromosome condensation" evidence=IEA]
[GO:0009330 "DNA topoisomerase complex (ATP-hydrolyzing)"
evidence=IEA] [GO:0008144 "drug binding" evidence=IEA] [GO:0008022
"protein C-terminus binding" evidence=IEA] [GO:0007059 "chromosome
segregation" evidence=IEA] [GO:0006974 "response to DNA damage
stimulus" evidence=IEA] [GO:0006266 "DNA ligation" evidence=IEA]
[GO:0006265 "DNA topological change" evidence=IEA] [GO:0005814
"centriole" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0005654 "nucleoplasm" evidence=IEA] [GO:0005080 "protein kinase
C binding" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0000793 "condensed chromosome" evidence=IEA]
[GO:0000228 "nuclear chromosome" evidence=IEA] [GO:0003918 "DNA
topoisomerase type II (ATP-hydrolyzing) activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001241
InterPro:IPR002205 InterPro:IPR003594 InterPro:IPR012542
InterPro:IPR013506 InterPro:IPR013757 InterPro:IPR013758
InterPro:IPR013759 InterPro:IPR013760 InterPro:IPR018522
Pfam:PF00204 Pfam:PF00521 Pfam:PF02518 Pfam:PF08070 PRINTS:PR00418
PROSITE:PS00177 SMART:SM00387 SMART:SM00433 SMART:SM00434
Pfam:PF01751 InterPro:IPR006171 GO:GO:0005524 GO:GO:0007059
GO:GO:0005654 GO:GO:0005730 GO:GO:0005814 GO:GO:0008144
GO:GO:0045944 GO:GO:0003682 GO:GO:0040016 GO:GO:0006974
GO:GO:0043065 GO:GO:0030263 Gene3D:3.30.565.10 SUPFAM:SSF55874
GO:GO:0000793 GO:GO:0006266 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 Gene3D:3.30.1360.40
InterPro:IPR024946 GO:GO:0000228 GO:GO:0009330 GO:GO:0006265
GO:GO:0003918 Gene3D:3.90.199.10 SUPFAM:SSF56719 Gene3D:1.10.268.10
Gene3D:3.40.50.670 GO:GO:0045870 GeneTree:ENSGT00390000016222
OMA:MFKQTWM EMBL:DAAA02049137 IPI:IPI00923890
Ensembl:ENSBTAT00000061367 ArrayExpress:F1MDU7 Uniprot:F1MDU7
Length = 1533
Score = 295 (108.9 bits), Expect = 7.4e-25, Sum P(2) = 7.4e-25
Identities = 100/370 (27%), Positives = 166/370 (44%)
Query: 252 LGYANSIRTIDGGTHIEGVKASL-TRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISV 310
+ + NSI T GG H++ V + T+ ++ + KK+K +++ V+ + ++
Sbjct: 311 ISFVNSIATSKGGRHVDYVADQIVTKLVDVVKKKNKG----GVAVKAHQVKNHMWIFVNA 366
Query: 311 RVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVXXXXXXXXXXXXXXXXXX 370
+ NP F+ QTK + +V+ S + ++++
Sbjct: 367 LIENPTFDSQTKENM-TLQVKSF--GSTCQLSEKFIKAAIGCGIVESILNWVKFKAQIQL 423
Query: 371 XXXXXXVRQKSVLRSSSLPGKLADCSST---TPEESEIFIVEGDSA-----GGSAKQGRD 422
V+ R +P KL D + E + + EGDSA G GRD
Sbjct: 424 NKKCSAVKHN---RIKGIP-KLDDANDAGGRNSTECTLILTEGDSAKTLAVSGLGVVGRD 479
Query: 423 RRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVK----GEDFKKEALRYHKI 478
+ + PLRGKILNV + +N EI N+I+ +GL K ED K LRY KI
Sbjct: 480 K--YGVFPLRGKILNVREASHKQIMENAEINNIIKIVGLQYKKNYEDEDSLK-TLRYGKI 536
Query: 479 IILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELK 538
+I+TD D DG+HI+ LL+ F + +L + + P+ KV + KQ Y E +
Sbjct: 537 MIMTDQDQDGSHIKGLLINFIHHNWPSLLRHRFLEEFITPIVKVSKNKQEMAFYSLPEFE 596
Query: 539 KVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRML--KQLVIEDAAEANVVFSSL 596
+ KSS P++ + ++ +KGLG + E + ++ + K ED A ++ FS
Sbjct: 597 EWKSSTPNHKKWKVKYYKGLGTSTSKEAKEYFADMKRHRIQFKYSGPEDDAAISLAFSK- 655
Query: 597 MGARVDTRKE 606
+ D RKE
Sbjct: 656 --KQTDDRKE 663
Score = 74 (31.1 bits), Expect = 7.4e-25, Sum P(2) = 7.4e-25
Identities = 19/51 (37%), Positives = 30/51 (58%)
Query: 10 GLHHLVYEILDNAVDEAQAG-YASNIEVALLADNS-VSVADNGRGIPIDLH 58
GL+ + EIL NA D Q S I + + +N+ +S+ +NG+GIP+ H
Sbjct: 80 GLYKIFDEILVNAADNKQRDPKMSCIRITIDPENNLISIWNNGKGIPVVEH 130
>ZFIN|ZDB-GENE-041008-136 [details] [associations]
symbol:top2b "topoisomerase (DNA) II beta"
species:7955 "Danio rerio" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003918 "DNA topoisomerase type II (ATP-hydrolyzing) activity"
evidence=IEA;ISS;IBA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005694 "chromosome" evidence=IEA] [GO:0006259 "DNA metabolic
process" evidence=IEA] [GO:0006265 "DNA topological change"
evidence=IEA;ISS;IBA] [GO:0005634 "nucleus" evidence=IEA;ISS]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISS] [GO:0009330 "DNA
topoisomerase complex (ATP-hydrolyzing)" evidence=ISS] [GO:0030261
"chromosome condensation" evidence=ISS] [GO:0008094 "DNA-dependent
ATPase activity" evidence=ISS] [GO:0007059 "chromosome segregation"
evidence=ISS;IBA] [GO:0006261 "DNA-dependent DNA replication"
evidence=IBA] [GO:0000712 "resolution of meiotic recombination
intermediates" evidence=IBA] [GO:0071778 "WINAC complex"
evidence=IBA] [GO:0006200 "ATP catabolic process" evidence=IBA]
[GO:0005080 "protein kinase C binding" evidence=IBA] [GO:0009295
"nucleoid" evidence=IBA] [GO:0003682 "chromatin binding"
evidence=IBA] [GO:0006312 "mitotic recombination" evidence=IBA]
[GO:0000795 "synaptonemal complex" evidence=IBA] [GO:0042826
"histone deacetylase binding" evidence=IBA] [GO:0000819 "sister
chromatid segregation" evidence=IBA] [GO:0010842 "retina layer
formation" evidence=IMP] [GO:0031290 "retinal ganglion cell axon
guidance" evidence=IMP] [GO:0007412 "axon target recognition"
evidence=IMP] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0016853 "isomerase activity" evidence=IEA] [GO:0003916 "DNA
topoisomerase activity" evidence=IEA] InterPro:IPR001241
InterPro:IPR002205 InterPro:IPR003594 InterPro:IPR012542
InterPro:IPR013506 InterPro:IPR013757 InterPro:IPR013758
InterPro:IPR013759 InterPro:IPR013760 InterPro:IPR018522
Pfam:PF00204 Pfam:PF00521 Pfam:PF02518 Pfam:PF08070 PRINTS:PR00418
PROSITE:PS00177 SMART:SM00387 SMART:SM00433 SMART:SM00434
Pfam:PF01751 InterPro:IPR006171 ZFIN:ZDB-GENE-041008-136
GO:GO:0005524 GO:GO:0005080 GO:GO:0003682 GO:GO:0006261
GO:GO:0010842 Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0042826
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 Gene3D:3.30.1360.40 InterPro:IPR024946
GO:GO:0000819 GO:GO:0006312 GO:GO:0071778 GO:GO:0007412
GO:GO:0031290 GO:GO:0070683 GO:GO:0000712 GO:GO:0000795
GO:GO:0006265 GO:GO:0003918 Gene3D:3.90.199.10 SUPFAM:SSF56719
Gene3D:1.10.268.10 Gene3D:3.40.50.670 KO:K03164
HOGENOM:HOG000216693 HOVERGEN:HBG052998
GeneTree:ENSGT00390000016222 CTD:7155 EMBL:BX927238 EMBL:CR391921
IPI:IPI00495305 RefSeq:NP_001038656.1 UniGene:Dr.105756 SMR:Q1LUT2
STRING:Q1LUT2 Ensembl:ENSDART00000130695 GeneID:569877
KEGG:dre:569877 InParanoid:Q1LUT2 OMA:PITKAAP NextBio:20889886
Uniprot:Q1LUT2
Length = 1618
Score = 257 (95.5 bits), Expect = 9.6e-25, Sum P(3) = 9.6e-25
Identities = 80/245 (32%), Positives = 119/245 (48%)
Query: 381 SVLRSSSLPG--KLADCSSTTPEESE---IFIVEGDSA-----GGSAKQGRDRRFQAILP 430
S ++ S + G KL D + + S + + EGDSA G GRDR + P
Sbjct: 448 SSVKHSKIKGIPKLDDANDAGGKHSSECTLILTEGDSAKSLAVSGLGVIGRDR--YGVFP 505
Query: 431 LRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKG--EDFKK-EALRYHKIIILTDADVD 487
LRGKILNV + +N EI N+I+ LGL K +D + ++LRY +I+I+TD D D
Sbjct: 506 LRGKILNVREATHKQIMENAEINNIIKILGLQYKKSYDDPESLKSLRYGRIMIMTDQDQD 565
Query: 488 GAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSN 547
G+HI+ LL+ FF+ +L + + P+ K + KQ Y E ++ K S
Sbjct: 566 GSHIKGLLINFFHHNWPSLLKHTFLEEFITPIVKASKNKQEVSFYSIPEFEEWKKHTESY 625
Query: 548 ALYSIQRFKGLGEMMPVQLWETTLNPEQR--MLKQLVIEDAAEANVVFSSLMGARVDTRK 605
+ I+ +KGLG + E + E+ M K ED A + FS + D RK
Sbjct: 626 KTWHIKYYKGLGTSTSKEAKEYFSDMERHRIMFKYNGTEDDAAITLAFSK---KKTDDRK 682
Query: 606 ELIQN 610
E + N
Sbjct: 683 EWLTN 687
Score = 84 (34.6 bits), Expect = 9.6e-25, Sum P(3) = 9.6e-25
Identities = 22/75 (29%), Positives = 37/75 (49%)
Query: 252 LGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDK-DISLSGEHVREGLTCIISV 310
+ + NSI T GG HI+ + + L + KK K+K +S+ V+ L ++
Sbjct: 331 ISFVNSIATTKGGRHIDYIVDQIVGKLIEVVKK----KNKAGVSVKPFQVKNHLWVFVNA 386
Query: 311 RVPNPEFEGQTKTRL 325
+ NP F+ QTK +
Sbjct: 387 LIENPTFDSQTKENM 401
Score = 76 (31.8 bits), Expect = 9.6e-25, Sum P(3) = 9.6e-25
Identities = 19/51 (37%), Positives = 31/51 (60%)
Query: 10 GLHHLVYEILDNAVDEAQAGY-ASNIEVALLAD-NSVSVADNGRGIPIDLH 58
GL+ + EIL NA D Q + I++ + + N++SV +NG+GIP+ H
Sbjct: 100 GLYKIFDEILVNAADNKQRDKNMTTIKITIDPESNTISVWNNGKGIPVVEH 150
Score = 37 (18.1 bits), Expect = 1.0e-20, Sum P(3) = 1.0e-20
Identities = 9/23 (39%), Positives = 14/23 (60%)
Query: 36 VALLADNSVSVADNGRGIPIDLH 58
VALL + VA + RG+ + L+
Sbjct: 256 VALLTRRAYDVAGSCRGVKVILN 278
>UNIPROTKB|F1NR58 [details] [associations]
symbol:TOP2B "DNA topoisomerase 2" species:9031 "Gallus
gallus" [GO:0005634 "nucleus" evidence=IEA] [GO:0005694
"chromosome" evidence=IEA] [GO:0006265 "DNA topological change"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003918
"DNA topoisomerase type II (ATP-hydrolyzing) activity"
evidence=IEA] InterPro:IPR001241 InterPro:IPR002205
InterPro:IPR003594 InterPro:IPR012542 InterPro:IPR013506
InterPro:IPR013757 InterPro:IPR013758 InterPro:IPR013759
InterPro:IPR013760 InterPro:IPR018522 Pfam:PF00204 Pfam:PF00521
Pfam:PF02518 Pfam:PF08070 PRINTS:PR00418 PROSITE:PS00177
SMART:SM00387 SMART:SM00433 SMART:SM00434 Pfam:PF01751
InterPro:IPR006171 GO:GO:0005524 GO:GO:0005634 GO:GO:0005694
Gene3D:3.30.565.10 SUPFAM:SSF55874 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211
Gene3D:3.30.1360.40 InterPro:IPR024946 GO:GO:0006265 GO:GO:0003918
Gene3D:3.90.199.10 SUPFAM:SSF56719 Gene3D:1.10.268.10
Gene3D:3.40.50.670 GeneTree:ENSGT00390000016222 IPI:IPI00819818
EMBL:AADN02001127 Ensembl:ENSGALT00000037716 ArrayExpress:F1NR58
Uniprot:F1NR58
Length = 1627
Score = 294 (108.6 bits), Expect = 2.9e-24, Sum P(2) = 2.9e-24
Identities = 113/408 (27%), Positives = 178/408 (43%)
Query: 219 KPLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTL 278
K +H+VV R DV L + + + NSI T GG H++ V + L
Sbjct: 313 KVIHEVVNERWDV-------CLTLSEKGFQQ--ISFVNSIATTKGGRHVDYVVDQVVGKL 363
Query: 279 NSLGKKSKTVKDK-DISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLG-NPEVRKVVDQ 336
+ KK K+K +S+ V+ + ++ + NP F+ QTK + P K
Sbjct: 364 IEVVKK----KNKAGVSVKPFQVKNHIWVFVNCLIENPSFDSQTKENMTLQP---KSFGS 416
Query: 337 SVQEYLTE-YLELHPDVXXXXXXXXXXXXXXXXXXXXXXXXVRQKSVLRSSSLPGKLADC 395
Q L+E + + + V+ + +P KL D
Sbjct: 417 KCQ--LSEKFFKAASNCGIIESILNWVKFKAQTQLNKKCSSVKHSKI---KGIP-KLDDA 470
Query: 396 SSTTPEES---EIFIVEGDSA-----GGSAKQGRDRRFQAILPLRGKILNVERKDEAAMY 447
+ + S + + EGDSA G GRDR + PLRGKILNV +
Sbjct: 471 NDAGGKHSLDCTLILTEGDSAKSLAVSGLGVIGRDR--YGVFPLRGKILNVREASHKQIM 528
Query: 448 KNEEIQNLIRALGLGVKG--EDFKK-EALRYHKIIILTDADVDGAHIRTLLLTFFYRYQK 504
+N EI N+I+ +GL K ED + ++LRY KI+I+TD D DG+HI+ LL+ F +
Sbjct: 529 ENAEINNIIKIVGLQYKKSYEDPESLKSLRYGKIMIMTDQDQDGSHIKGLLINFIHHNWP 588
Query: 505 TLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPV 564
+L G + + P+ K + KQ Y E + K ++ + I+ +KGLG
Sbjct: 589 SLLKHGFLEEFITPIVKASKNKQELSFYSIPEFDEWKKHMENHKAWKIKYYKGLGTSTAK 648
Query: 565 QLWETTLNPEQ-RMLKQLV-IEDAAEANVVFSSLMGARVDTRKELIQN 610
+ E + E+ R+L + ED A + FS ++D RKE + N
Sbjct: 649 EAKEYFADMERHRILFRYAGPEDDAAITLAFSK---KKIDDRKEWLTN 693
Score = 70 (29.7 bits), Expect = 2.9e-24, Sum P(2) = 2.9e-24
Identities = 18/51 (35%), Positives = 30/51 (58%)
Query: 10 GLHHLVYEILDNAVDEAQAGYASN-IEVALLAD-NSVSVADNGRGIPIDLH 58
GL+ + EIL NA D Q I++++ + N +S+ +NG+GIP+ H
Sbjct: 106 GLYKIFDEILVNAADNKQRDKNMTCIKISIDPESNIISIWNNGKGIPVVEH 156
>UNIPROTKB|O42131 [details] [associations]
symbol:TOP2B "DNA topoisomerase 2-beta" species:9031
"Gallus gallus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0005654 "nucleoplasm"
evidence=IEA] [GO:0000712 "resolution of meiotic recombination
intermediates" evidence=IBA] [GO:0000795 "synaptonemal complex"
evidence=IBA] [GO:0000819 "sister chromatid segregation"
evidence=IBA] [GO:0003682 "chromatin binding" evidence=IBA]
[GO:0003918 "DNA topoisomerase type II (ATP-hydrolyzing) activity"
evidence=ISS;IBA] [GO:0005080 "protein kinase C binding"
evidence=IBA] [GO:0006261 "DNA-dependent DNA replication"
evidence=IBA] [GO:0006265 "DNA topological change"
evidence=ISS;IBA] [GO:0006312 "mitotic recombination" evidence=IBA]
[GO:0007059 "chromosome segregation" evidence=IBA] [GO:0009295
"nucleoid" evidence=IBA] [GO:0042826 "histone deacetylase binding"
evidence=IBA] [GO:0071778 "WINAC complex" evidence=IBA]
InterPro:IPR001241 InterPro:IPR002205 InterPro:IPR003594
InterPro:IPR012542 InterPro:IPR013506 InterPro:IPR013757
InterPro:IPR013758 InterPro:IPR013759 InterPro:IPR013760
InterPro:IPR018522 Pfam:PF00204 Pfam:PF00521 Pfam:PF02518
Pfam:PF08070 PRINTS:PR00418 PROSITE:PS00177 SMART:SM00387
SMART:SM00433 SMART:SM00434 Pfam:PF01751 InterPro:IPR006171
GO:GO:0005524 GO:GO:0005080 GO:GO:0005654 GO:GO:0003682
GO:GO:0006261 Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0042826
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 Gene3D:3.30.1360.40 InterPro:IPR024946
GO:GO:0000819 GO:GO:0006312 GO:GO:0071778 GO:GO:0070683
GO:GO:0000712 GO:GO:0000795 GO:GO:0006265 GO:GO:0003918
Gene3D:3.90.199.10 SUPFAM:SSF56719 Gene3D:1.10.268.10
eggNOG:COG0187 Gene3D:3.40.50.670 PROSITE:PS50880 KO:K03164
HOGENOM:HOG000216693 HOVERGEN:HBG052998 EMBL:AB007446
IPI:IPI00819818 RefSeq:NP_990413.1 UniGene:Gga.30963
ProteinModelPortal:O42131 SMR:O42131 STRING:O42131 PRIDE:O42131
GeneID:395966 KEGG:gga:395966 CTD:7155 NextBio:20816031
Uniprot:O42131
Length = 1627
Score = 294 (108.6 bits), Expect = 2.9e-24, Sum P(2) = 2.9e-24
Identities = 113/408 (27%), Positives = 178/408 (43%)
Query: 219 KPLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTL 278
K +H+VV R DV L + + + NSI T GG H++ V + L
Sbjct: 313 KVIHEVVNERWDV-------CLTLSEKGFQQ--ISFVNSIATTKGGRHVDYVVDQVVGKL 363
Query: 279 NSLGKKSKTVKDK-DISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLG-NPEVRKVVDQ 336
+ KK K+K +S+ V+ + ++ + NP F+ QTK + P K
Sbjct: 364 IEVVKK----KNKAGVSVKPFQVKNHIWVFVNCLIENPSFDSQTKENMTLQP---KSFGS 416
Query: 337 SVQEYLTE-YLELHPDVXXXXXXXXXXXXXXXXXXXXXXXXVRQKSVLRSSSLPGKLADC 395
Q L+E + + + V+ + +P KL D
Sbjct: 417 KCQ--LSEKFFKAASNCGIIESILNWVKFKAQTQLNKKCSSVKHSKI---KGIP-KLDDA 470
Query: 396 SSTTPEES---EIFIVEGDSA-----GGSAKQGRDRRFQAILPLRGKILNVERKDEAAMY 447
+ + S + + EGDSA G GRDR + PLRGKILNV +
Sbjct: 471 NDAGGKHSLDCTLILTEGDSAKSLAVSGLGVIGRDR--YGVFPLRGKILNVREASHKQIM 528
Query: 448 KNEEIQNLIRALGLGVKG--EDFKK-EALRYHKIIILTDADVDGAHIRTLLLTFFYRYQK 504
+N EI N+I+ +GL K ED + ++LRY KI+I+TD D DG+HI+ LL+ F +
Sbjct: 529 ENAEINNIIKIVGLQYKKSYEDPESLKSLRYGKIMIMTDQDQDGSHIKGLLINFIHHNWP 588
Query: 505 TLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPV 564
+L G + + P+ K + KQ Y E + K ++ + I+ +KGLG
Sbjct: 589 SLLKHGFLEEFITPIVKASKNKQELSFYSIPEFDEWKKHMENHKAWKIKYYKGLGTSTAK 648
Query: 565 QLWETTLNPEQ-RMLKQLV-IEDAAEANVVFSSLMGARVDTRKELIQN 610
+ E + E+ R+L + ED A + FS ++D RKE + N
Sbjct: 649 EAKEYFADMERHRILFRYAGPEDDAAITLAFSK---KKIDDRKEWLTN 693
Score = 70 (29.7 bits), Expect = 2.9e-24, Sum P(2) = 2.9e-24
Identities = 18/51 (35%), Positives = 30/51 (58%)
Query: 10 GLHHLVYEILDNAVDEAQAGYASN-IEVALLAD-NSVSVADNGRGIPIDLH 58
GL+ + EIL NA D Q I++++ + N +S+ +NG+GIP+ H
Sbjct: 106 GLYKIFDEILVNAADNKQRDKNMTCIKISIDPESNIISIWNNGKGIPVVEH 156
>UNIPROTKB|E1BZ19 [details] [associations]
symbol:TOP2B "DNA topoisomerase 2" species:9031 "Gallus
gallus" [GO:0006265 "DNA topological change" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003918 "DNA
topoisomerase type II (ATP-hydrolyzing) activity" evidence=IEA]
[GO:0000792 "heterochromatin" evidence=IEA] [GO:0001764 "neuron
migration" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0005080 "protein kinase C binding" evidence=IEA]
[GO:0005654 "nucleoplasm" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0007409 "axonogenesis" evidence=IEA] [GO:0008022
"protein C-terminus binding" evidence=IEA] [GO:0030900 "forebrain
development" evidence=IEA] [GO:0042826 "histone deacetylase
binding" evidence=IEA] [GO:0046982 "protein heterodimerization
activity" evidence=IEA] [GO:0071778 "WINAC complex" evidence=IEA]
InterPro:IPR001241 InterPro:IPR002205 InterPro:IPR003594
InterPro:IPR012542 InterPro:IPR013506 InterPro:IPR013757
InterPro:IPR013758 InterPro:IPR013759 InterPro:IPR013760
InterPro:IPR018522 Pfam:PF00204 Pfam:PF00521 Pfam:PF02518
Pfam:PF08070 PRINTS:PR00418 PROSITE:PS00177 SMART:SM00387
SMART:SM00433 SMART:SM00434 Pfam:PF01751 InterPro:IPR006171
GO:GO:0005829 GO:GO:0005524 GO:GO:0005654 GO:GO:0003682
Gene3D:3.30.565.10 SUPFAM:SSF55874 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211
Gene3D:3.30.1360.40 InterPro:IPR024946 GO:GO:0000792 GO:GO:0071778
GO:GO:0006265 GO:GO:0003918 Gene3D:3.90.199.10 SUPFAM:SSF56719
Gene3D:1.10.268.10 Gene3D:3.40.50.670 GeneTree:ENSGT00390000016222
OMA:AKEYFQD EMBL:AADN02001127 IPI:IPI00599764
ProteinModelPortal:E1BZ19 Ensembl:ENSGALT00000018432
ArrayExpress:E1BZ19 Uniprot:E1BZ19
Length = 1629
Score = 294 (108.6 bits), Expect = 2.9e-24, Sum P(2) = 2.9e-24
Identities = 115/410 (28%), Positives = 178/410 (43%)
Query: 219 KPLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLT-RT 277
K +H+VV R DV L + + + NSI T GG H++ V + +
Sbjct: 313 KVIHEVVNERWDV-------CLTLSEKGFQQ--ISFVNSIATTKGGRHVDYVVDQVVGKL 363
Query: 278 LNSLGKKSKT-VKDKDISLSG-EHVREGLTCIISVRVPNPEFEGQTKTRLG-NPEVRKVV 334
+ + KK+K V K S H+ + C+I NP F+ QTK + P K
Sbjct: 364 IEVVKKKNKAGVSVKPFQASNFNHIWVFVNCLIE----NPSFDSQTKENMTLQP---KSF 416
Query: 335 DQSVQEYLTE-YLELHPDVXXXXXXXXXXXXXXXXXXXXXXXXVRQKSVLRSSSLPGKLA 393
Q L+E + + + V+ + +P KL
Sbjct: 417 GSKCQ--LSEKFFKAASNCGIIESILNWVKFKAQTQLNKKCSSVKHSKI---KGIP-KLD 470
Query: 394 DCSSTTPEES---EIFIVEGDSA-----GGSAKQGRDRRFQAILPLRGKILNVERKDEAA 445
D + + S + + EGDSA G GRDR + PLRGKILNV
Sbjct: 471 DANDAGGKHSLDCTLILTEGDSAKSLAVSGLGVIGRDR--YGVFPLRGKILNVREASHKQ 528
Query: 446 MYKNEEIQNLIRALGLGVKG--EDFKK-EALRYHKIIILTDADVDGAHIRTLLLTFFYRY 502
+ +N EI N+I+ +GL K ED + ++LRY KI+I+TD D DG+HI+ LL+ F +
Sbjct: 529 IMENAEINNIIKIVGLQYKKSYEDPESLKSLRYGKIMIMTDQDQDGSHIKGLLINFIHHN 588
Query: 503 QKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMM 562
+L G + + P+ K + KQ Y E + K ++ + I+ +KGLG
Sbjct: 589 WPSLLKHGFLEEFITPIVKASKNKQELSFYSIPEFDEWKKHMENHKAWKIKYYKGLGTST 648
Query: 563 PVQLWETTLNPEQ-RMLKQLV-IEDAAEANVVFSSLMGARVDTRKELIQN 610
+ E + E+ R+L + ED A + FS ++D RKE + N
Sbjct: 649 AKEAKEYFADMERHRILFRYAGPEDDAAITLAFSK---KKIDDRKEWLTN 695
Score = 70 (29.7 bits), Expect = 2.9e-24, Sum P(2) = 2.9e-24
Identities = 18/51 (35%), Positives = 30/51 (58%)
Query: 10 GLHHLVYEILDNAVDEAQAGYASN-IEVALLAD-NSVSVADNGRGIPIDLH 58
GL+ + EIL NA D Q I++++ + N +S+ +NG+GIP+ H
Sbjct: 106 GLYKIFDEILVNAADNKQRDKNMTCIKISIDPESNIISIWNNGKGIPVVEH 156
>UNIPROTKB|E9PCY5 [details] [associations]
symbol:TOP2B "DNA topoisomerase 2" species:9606 "Homo
sapiens" [GO:0005694 "chromosome" evidence=IEA] [GO:0006265 "DNA
topological change" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003918 "DNA topoisomerase type II
(ATP-hydrolyzing) activity" evidence=IEA] [GO:0001764 "neuron
migration" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0007409 "axonogenesis" evidence=IEA] [GO:0030900 "forebrain
development" evidence=IEA] InterPro:IPR001241 InterPro:IPR002205
InterPro:IPR003594 InterPro:IPR013506 InterPro:IPR013757
InterPro:IPR013758 InterPro:IPR013759 InterPro:IPR013760
InterPro:IPR018522 Pfam:PF00204 Pfam:PF00521 Pfam:PF02518
PRINTS:PR00418 PROSITE:PS00177 SMART:SM00387 SMART:SM00433
SMART:SM00434 Pfam:PF01751 InterPro:IPR006171 GO:GO:0005524
GO:GO:0005634 GO:GO:0001764 GO:GO:0005694 GO:GO:0030900
GO:GO:0007409 Gene3D:3.30.565.10 SUPFAM:SSF55874 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211
Gene3D:3.30.1360.40 InterPro:IPR024946 GO:GO:0006265 GO:GO:0003918
Gene3D:3.90.199.10 SUPFAM:SSF56719 Gene3D:1.10.268.10
Gene3D:3.40.50.670 HGNC:HGNC:11990 ChiTaRS:TOP2B EMBL:AC093416
IPI:IPI00925477 ProteinModelPortal:E9PCY5 SMR:E9PCY5
Ensembl:ENST00000424225 ArrayExpress:E9PCY5 Bgee:E9PCY5
Uniprot:E9PCY5
Length = 1150
Score = 288 (106.4 bits), Expect = 4.1e-24, Sum P(2) = 4.1e-24
Identities = 105/375 (28%), Positives = 165/375 (44%)
Query: 252 LGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDK-DISLSGEHVREGLTCIISV 310
+ + NSI T GG H++ V + L + KK K+K +S+ V+ + I+
Sbjct: 327 ISFVNSIATTKGGRHVDYVVDQVVGKLIEVVKK----KNKAGVSVKPFQVKNHIWVFINC 382
Query: 311 RVPNPEFEGQTKTRLG-NPEVRKVVDQSVQEYLTE-YLELHPDVXXXXXXXXXXXXXXXX 368
+ NP F+ QTK + P K Q L+E + + +
Sbjct: 383 LIENPTFDSQTKENMTLQP---KSFGSKCQ--LSEKFFKAASNCGIVESILNWVKFKAQT 437
Query: 369 XXXXXXXXVRQKSVLRSSSLPGKLADCSSTTPEES---EIFIVEGDSA-----GGSAKQG 420
V+ + +P KL D + + S + + EGDSA G G
Sbjct: 438 QLNKKCSSVKYSKI---KGIP-KLDDANDAGGKHSLECTLILTEGDSAKSLAVSGLGVIG 493
Query: 421 RDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKG--EDFKK-EALRYHK 477
RDR + PLRGKILNV + +N EI N+I+ +GL K +D + + LRY K
Sbjct: 494 RDR--YGVFPLRGKILNVREASHKQIMENAEINNIIKIVGLQYKKSYDDAESLKTLRYGK 551
Query: 478 IIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAEL 537
I+I+TD D DG+HI+ LL+ F + +L G + + P+ K + KQ Y E
Sbjct: 552 IMIMTDQDQDGSHIKGLLINFIHHNWPSLLKHGFLEEFITPIVKASKNKQELSFYSIPEF 611
Query: 538 KKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQ-RMLKQLV-IEDAAEANVVFSS 595
+ K + + I+ +KGLG + E + E+ R+L + ED A + FS
Sbjct: 612 DEWKKHIENQKAWKIKYYKGLGTSTAKEAKEYFADMERHRILFRYAGPEDDAAITLAFSK 671
Query: 596 LMGARVDTRKELIQN 610
++D RKE + N
Sbjct: 672 ---KKIDDRKEWLTN 683
Score = 71 (30.1 bits), Expect = 4.1e-24, Sum P(2) = 4.1e-24
Identities = 19/51 (37%), Positives = 30/51 (58%)
Query: 10 GLHHLVYEILDNAVDEAQAGYASN-IEVALLAD-NSVSVADNGRGIPIDLH 58
GL+ + EIL NA D Q I+V++ + N +S+ +NG+GIP+ H
Sbjct: 96 GLYKIFDEILVNAADNKQRDKNMTCIKVSIDPESNIISIWNNGKGIPVVEH 146
>UNIPROTKB|Q7RJ69 [details] [associations]
symbol:PY03394 "DNA topoisomerase 2" species:73239
"Plasmodium yoelii yoelii" [GO:0000712 "resolution of meiotic
recombination intermediates" evidence=IBA] [GO:0000795
"synaptonemal complex" evidence=IBA] [GO:0000819 "sister chromatid
segregation" evidence=IBA] [GO:0003918 "DNA topoisomerase type II
(ATP-hydrolyzing) activity" evidence=IBA] [GO:0006261
"DNA-dependent DNA replication" evidence=IBA] [GO:0006265 "DNA
topological change" evidence=IBA] [GO:0006312 "mitotic
recombination" evidence=IBA] [GO:0007059 "chromosome segregation"
evidence=IBA] [GO:0009295 "nucleoid" evidence=IBA]
InterPro:IPR001241 InterPro:IPR002205 InterPro:IPR003594
InterPro:IPR013506 InterPro:IPR013757 InterPro:IPR013758
InterPro:IPR013759 InterPro:IPR013760 InterPro:IPR018522
Pfam:PF00204 Pfam:PF00521 Pfam:PF02518 PRINTS:PR00418
PROSITE:PS00177 SMART:SM00387 SMART:SM00433 SMART:SM00434
Pfam:PF01751 InterPro:IPR006171 GO:GO:0005524 GO:GO:0006261
Gene3D:3.30.565.10 SUPFAM:SSF55874 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211
Gene3D:3.30.1360.40 InterPro:IPR024946 GO:GO:0000819 GO:GO:0006312
GO:GO:0070683 GO:GO:0000712 GO:GO:0000795 GO:GO:0006265
GO:GO:0003918 Gene3D:3.90.199.10 SUPFAM:SSF56719 Gene3D:1.10.268.10
eggNOG:COG0187 Gene3D:3.40.50.670 KO:K03164 EMBL:AABL01000973
RefSeq:XP_731396.1 HSSP:P06786 ProteinModelPortal:Q7RJ69
STRING:Q7RJ69 GeneID:3830618 KEGG:pyo:PY03394
EuPathDB:PlasmoDB:PY03394 Uniprot:Q7RJ69
Length = 1489
Score = 231 (86.4 bits), Expect = 7.8e-24, Sum P(3) = 7.8e-24
Identities = 66/234 (28%), Positives = 120/234 (51%)
Query: 394 DCSSTTPEESEIFIVEGDSA-----GGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYK 448
D S +E + + EGDSA G + GRDR + PL+GK+LNV +
Sbjct: 490 DAGSKYSQECTLILTEGDSAKTSCLAGLSIVGRDR--YGVFPLKGKLLNVRDASFKQLMD 547
Query: 449 NEEIQNLIRALGLGVKGEDFKK-EALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLF 507
N+EIQN+ + +GL + ++ + + LRY ++I+TD D DG+HI+ LL+ +++ +L
Sbjct: 548 NKEIQNIFKIMGLDITDKNKQDIKGLRYGSLMIMTDQDYDGSHIKGLLINMIHKFWPSLL 607
Query: 508 D-EGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNAL-YSIQRFKGLGEMMPVQ 565
+G + V P+ KV++G Q + AE ++ K + +N + + I+ +KGLG +
Sbjct: 608 KHKGFLCEFVTPIVKVQKGNQELSFFTIAEYEQWKEN--TNLVGWKIKYYKGLGTSTDKE 665
Query: 566 LWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLDH 619
+ + + + L D + + + + R++ RK +QN +DH
Sbjct: 666 FKQYFSDIQSHKIFFLWTGDR-DGDSIDMAFSKKRIEDRKLWLQNFILGSYVDH 718
Score = 113 (44.8 bits), Expect = 7.8e-24, Sum P(3) = 7.8e-24
Identities = 26/88 (29%), Positives = 41/88 (46%)
Query: 244 SDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREG 303
+D + + NSI T GGTH+ + L LNSL KK+ + + H+R
Sbjct: 344 TDGSQFQQVSFVNSICTTKGGTHVSYIVDQL---LNSLSKKANAKNKGGMEIKAGHIRNH 400
Query: 304 LTCIISVRVPNPEFEGQTKTRLGNPEVR 331
L ++ + NP F+ QTK L + +
Sbjct: 401 LWVFVNCLIVNPTFDSQTKETLTTKQAK 428
Score = 65 (27.9 bits), Expect = 7.8e-24, Sum P(3) = 7.8e-24
Identities = 19/60 (31%), Positives = 33/60 (55%)
Query: 10 GLHHLVYEILDNAVD-EAQAGYASN-----IEVALLADNS-VSVADNGRGIPIDLHPATN 62
GL+ + EI+ NA D +A+ S I++ + + +SV ++G GIP+D+H N
Sbjct: 58 GLYKIFDEIIVNAADVKAREKEKSENPMTCIKIEINREQKKISVYNDGEGIPVDIHKEMN 117
>UNIPROTKB|A8JD08 [details] [associations]
symbol:TOP2 "DNA topoisomerase 2" species:3055
"Chlamydomonas reinhardtii" [GO:0000712 "resolution of meiotic
recombination intermediates" evidence=IBA] [GO:0000795
"synaptonemal complex" evidence=IBA] [GO:0000819 "sister chromatid
segregation" evidence=IBA] [GO:0003918 "DNA topoisomerase type II
(ATP-hydrolyzing) activity" evidence=IBA] [GO:0006261
"DNA-dependent DNA replication" evidence=IBA] [GO:0006265 "DNA
topological change" evidence=IBA] [GO:0006312 "mitotic
recombination" evidence=IBA] [GO:0007059 "chromosome segregation"
evidence=IBA] [GO:0009295 "nucleoid" evidence=IBA]
InterPro:IPR001241 InterPro:IPR002205 InterPro:IPR003594
InterPro:IPR013506 InterPro:IPR013757 InterPro:IPR013758
InterPro:IPR013759 InterPro:IPR013760 InterPro:IPR018522
Pfam:PF00204 Pfam:PF00521 Pfam:PF02518 PRINTS:PR00418
PROSITE:PS00177 SMART:SM00387 SMART:SM00433 SMART:SM00434
Pfam:PF01751 InterPro:IPR006171 GO:GO:0005524 GO:GO:0006261
Gene3D:3.30.565.10 SUPFAM:SSF55874 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211
Gene3D:3.30.1360.40 InterPro:IPR024946 GO:GO:0000819 GO:GO:0006312
GO:GO:0070683 GO:GO:0000712 GO:GO:0000795 GO:GO:0006265
GO:GO:0003918 Gene3D:3.90.199.10 SUPFAM:SSF56719 Gene3D:1.10.268.10
eggNOG:COG0187 Gene3D:3.40.50.670 KO:K03164 EMBL:DS496159
RefSeq:XP_001700298.1 ProteinModelPortal:A8JD08 STRING:A8JD08
EnsemblPlants:EDO98265 GeneID:5725848 KEGG:cre:CHLREDRAFT_38019
ProtClustDB:PLN03128 BioCyc:CHLAMY:CHLREDRAFT_38019-MONOMER
Uniprot:A8JD08
Length = 1167
Score = 265 (98.3 bits), Expect = 8.1e-24, Sum P(2) = 8.1e-24
Identities = 94/365 (25%), Positives = 155/365 (42%)
Query: 252 LGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVR 311
+ + NSI T GGTH++ + + + ++ K SK K ++ V+ L ++
Sbjct: 311 VSFVNSISTQKGGTHVDYIVNQVVK--HATEKLSKKTT-KTAAIKPAMVKNHLWVFLNCY 367
Query: 312 VPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVXXXXXXXXXXXXXXXXXXX 371
V NP F+ QTK L +R S E L+ +
Sbjct: 368 VENPAFDSQTKETL---TLRATAFGSKCELPVPLLD--KVLKAGLSDSIIRFAEFKSQKE 422
Query: 372 XXXXXVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRD---RRFQAI 428
++S L + D E + + EGDSA A G R +
Sbjct: 423 LKKGDGTKRSRLHGITKLDDANDAGGPRSRECTLILTEGDSAKALAISGLGVVGRDHYGV 482
Query: 429 LPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKE-ALRYHKIIILTDADVD 487
PLRGK+LNV A + N EIQN+ + +GL G+ ++ +LRY ++I+TD D D
Sbjct: 483 FPLRGKLLNVREASAAQIAANAEIQNIKQIMGLQ-HGKVYENTTSLRYGHLMIMTDQDHD 541
Query: 488 GAHIRTLLLTFFYRYQKTLFD-EGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 546
G+HI+ L++ F + + +L G + + P+ K RG+ + Y E + K S +
Sbjct: 542 GSHIKGLIMNFLHSFFPSLLRIPGFLLEFITPIVKARRGRDTKVFYTMPEYEAWKESLGN 601
Query: 547 -NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRK 605
+ I+ +KGLG + E + K+ V E + + + + RVD RK
Sbjct: 602 ATTAWDIKYYKGLGTSTKEEAQEYFSRLDLHR-KEFVWEGDEDGDSIELAFSKKRVDDRK 660
Query: 606 ELIQN 610
E + N
Sbjct: 661 EWLSN 665
Score = 93 (37.8 bits), Expect = 8.1e-24, Sum P(2) = 8.1e-24
Identities = 22/53 (41%), Positives = 33/53 (62%)
Query: 8 PRGLHHLVYEILDNAVD-EAQAGYASNIEVAL-LADNSVSVADNGRGIPIDLH 58
P GL+ + EIL NA D + + I+V + A NS+ V +NG+GIP+D+H
Sbjct: 66 PPGLYKIFDEILVNAADNKVRDATMDTIKVDIDAATNSIRVWNNGKGIPVDVH 118
>MGI|MGI:98791 [details] [associations]
symbol:Top2b "topoisomerase (DNA) II beta" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0000712 "resolution of meiotic recombination intermediates"
evidence=IBA] [GO:0000795 "synaptonemal complex" evidence=IBA]
[GO:0000819 "sister chromatid segregation" evidence=IBA]
[GO:0001764 "neuron migration" evidence=IMP] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=ISO;IBA] [GO:0003916 "DNA topoisomerase activity"
evidence=IEA] [GO:0003918 "DNA topoisomerase type II
(ATP-hydrolyzing) activity" evidence=ISO;IBA] [GO:0005080 "protein
kinase C binding" evidence=ISO;IBA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO;IDA] [GO:0005654 "nucleoplasm" evidence=ISO]
[GO:0005694 "chromosome" evidence=IDA] [GO:0005829 "cytosol"
evidence=ISO] [GO:0006259 "DNA metabolic process" evidence=IEA]
[GO:0006261 "DNA-dependent DNA replication" evidence=IBA]
[GO:0006265 "DNA topological change" evidence=ISO;IBA] [GO:0006312
"mitotic recombination" evidence=IBA] [GO:0007059 "chromosome
segregation" evidence=IBA] [GO:0007409 "axonogenesis" evidence=IMP]
[GO:0008022 "protein C-terminus binding" evidence=ISO] [GO:0016853
"isomerase activity" evidence=IEA] [GO:0019899 "enzyme binding"
evidence=ISO] [GO:0030900 "forebrain development" evidence=IMP]
[GO:0042826 "histone deacetylase binding" evidence=ISO;IBA]
[GO:0044774 "mitotic DNA integrity checkpoint" evidence=IBA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0046982 "protein
heterodimerization activity" evidence=ISO] [GO:0071778 "WINAC
complex" evidence=ISO;IBA] InterPro:IPR001241 InterPro:IPR002205
InterPro:IPR003594 InterPro:IPR012542 InterPro:IPR013506
InterPro:IPR013757 InterPro:IPR013758 InterPro:IPR013759
InterPro:IPR013760 InterPro:IPR018522 Pfam:PF00204 Pfam:PF00521
Pfam:PF02518 Pfam:PF08070 PRINTS:PR00418 PROSITE:PS00177
SMART:SM00387 SMART:SM00433 SMART:SM00434 Pfam:PF01751
MGI:MGI:98791 InterPro:IPR006171 GO:GO:0005829 GO:GO:0005524
GO:GO:0001764 GO:GO:0005080 GO:GO:0005654 GO:GO:0005730
GO:GO:0030900 GO:GO:0003682 GO:GO:0006261 GO:GO:0007409
Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0042826 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211
Gene3D:3.30.1360.40 InterPro:IPR024946 GO:GO:0000819 GO:GO:0006312
GO:GO:0071778 GO:GO:0070683 GO:GO:0000712 GO:GO:0000795
GO:GO:0006265 GO:GO:0003918 Gene3D:3.90.199.10 SUPFAM:SSF56719
Gene3D:1.10.268.10 eggNOG:COG0187 Gene3D:3.40.50.670
PROSITE:PS50880 KO:K03164 HOGENOM:HOG000216693 HOVERGEN:HBG052998
GeneTree:ENSGT00390000016222 CTD:7155 OMA:AKEYFQD EMBL:D38046
EMBL:BC041106 EMBL:BC054541 IPI:IPI00135443 RefSeq:NP_033435.2
UniGene:Mm.130362 ProteinModelPortal:Q64511 SMR:Q64511
IntAct:Q64511 STRING:Q64511 PhosphoSite:Q64511 PaxDb:Q64511
PRIDE:Q64511 Ensembl:ENSMUST00000017629 GeneID:21974 KEGG:mmu:21974
UCSC:uc007shc.1 InParanoid:Q64511 OrthoDB:EOG4640B2
BindingDB:Q64511 ChEMBL:CHEMBL5564 NextBio:301674 Bgee:Q64511
CleanEx:MM_TOP2B Genevestigator:Q64511
GermOnline:ENSMUSG00000017485 Uniprot:Q64511
Length = 1612
Score = 289 (106.8 bits), Expect = 8.2e-24, Sum P(2) = 8.2e-24
Identities = 105/375 (28%), Positives = 165/375 (44%)
Query: 252 LGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDK-DISLSGEHVREGLTCIISV 310
+ + NSI T GG H++ V + L + KK K+K +S+ V+ + I+
Sbjct: 320 ISFVNSIATTKGGRHVDYVVDQVVSKLIEVVKK----KNKAGVSVKPFQVKNHIWVFINC 375
Query: 311 RVPNPEFEGQTKTRLG-NPEVRKVVDQSVQEYLTE-YLELHPDVXXXXXXXXXXXXXXXX 368
+ NP F+ QTK + P K Q L+E + + +
Sbjct: 376 LIENPTFDSQTKENMTLQP---KSFGSKCQ--LSEKFFKAASNCGIVESILNWVKFKAQT 430
Query: 369 XXXXXXXXVRQKSVLRSSSLPGKLADCSSTTPEES---EIFIVEGDSA-----GGSAKQG 420
V+ + +P KL D + + S + + EGDSA G G
Sbjct: 431 QLNKKCSSVKYSKI---KGIP-KLDDANDAGGKHSLECTLILTEGDSAKSLAVSGLGVIG 486
Query: 421 RDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKG--EDFKK-EALRYHK 477
RDR + PLRGKILNV + +N EI N+I+ +GL K +D + + LRY K
Sbjct: 487 RDR--YGVFPLRGKILNVREASHKQIMENAEINNIIKIVGLQYKKSYDDAESLKTLRYGK 544
Query: 478 IIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAEL 537
I+I+TD D DG+HI+ LL+ F + +L G + + P+ K + KQ Y E
Sbjct: 545 IMIMTDQDQDGSHIKGLLINFIHHNWPSLLKHGFLEEFITPIVKASKNKQELSFYSIPEF 604
Query: 538 KKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQ-RMLKQLV-IEDAAEANVVFSS 595
+ K + + I+ +KGLG + E + E+ R+L + ED A + FS
Sbjct: 605 DEWKKHIENQKAWKIKYYKGLGTSTAKEAKEYFADMERHRILFRYAGPEDDAAITLAFSK 664
Query: 596 LMGARVDTRKELIQN 610
++D RKE + N
Sbjct: 665 ---KKIDDRKEWLTN 676
Score = 71 (30.1 bits), Expect = 8.2e-24, Sum P(2) = 8.2e-24
Identities = 19/51 (37%), Positives = 30/51 (58%)
Query: 10 GLHHLVYEILDNAVDEAQAGYASN-IEVALLAD-NSVSVADNGRGIPIDLH 58
GL+ + EIL NA D Q I+V++ + N +S+ +NG+GIP+ H
Sbjct: 89 GLYKIFDEILVNAADNKQRDKNMTCIKVSIDPESNIISIWNNGKGIPVVEH 139
>POMBASE|SPBC1A4.03c [details] [associations]
symbol:top2 "DNA topoisomerase II" species:4896
"Schizosaccharomyces pombe" [GO:0000228 "nuclear chromosome"
evidence=NAS] [GO:0000712 "resolution of meiotic recombination
intermediates" evidence=IMP] [GO:0003918 "DNA topoisomerase type II
(ATP-hydrolyzing) activity" evidence=IGI;IDA;IMP] [GO:0005524 "ATP
binding" evidence=IC] [GO:0005634 "nucleus" evidence=IDA]
[GO:0006265 "DNA topological change" evidence=IGI;IDA;IMP]
[GO:0006271 "DNA strand elongation involved in DNA replication"
evidence=ISO] [GO:0006325 "chromatin organization" evidence=IGI]
[GO:0006406 "mRNA export from nucleus" evidence=IMP] [GO:0007076
"mitotic chromosome condensation" evidence=IMP] [GO:0042790
"transcription of nuclear large rRNA transcript from RNA polymerase
I promoter" evidence=IGI] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001241 InterPro:IPR002205
InterPro:IPR003594 InterPro:IPR013506 InterPro:IPR013757
InterPro:IPR013758 InterPro:IPR013759 InterPro:IPR013760
InterPro:IPR018522 Pfam:PF00204 Pfam:PF00521 Pfam:PF02518
PRINTS:PR00418 PROSITE:PS00177 SMART:SM00387 SMART:SM00433
SMART:SM00434 PomBase:SPBC1A4.03c Pfam:PF01751 InterPro:IPR006171
GO:GO:0005524 EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0006406
Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0007076 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211
Gene3D:3.30.1360.40 InterPro:IPR024946 GO:GO:0006325 GO:GO:0000228
GO:GO:0006271 GO:GO:0000712 GO:GO:0042790 GO:GO:0006265
GO:GO:0003918 Gene3D:3.90.199.10 SUPFAM:SSF56719 Gene3D:1.10.268.10
eggNOG:COG0187 Gene3D:3.40.50.670 PROSITE:PS50880 KO:K03164
HOGENOM:HOG000216693 OMA:AKEYFQD EMBL:X04326 PIR:T39851
RefSeq:NP_595805.1 ProteinModelPortal:P08096 SMR:P08096
STRING:P08096 EnsemblFungi:SPBC1A4.03c.1 GeneID:2540541
KEGG:spo:SPBC1A4.03c OrthoDB:EOG4XPTPZ NextBio:20801667
Uniprot:P08096
Length = 1485
Score = 280 (103.6 bits), Expect = 9.7e-24, Sum P(2) = 9.7e-24
Identities = 105/430 (24%), Positives = 184/430 (42%)
Query: 199 NEYFFAGGLEEYVQ-WLNTDKKPLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANS 257
NE G ++YV+ +L +D KP + + D+A SD + + N+
Sbjct: 305 NERISISGFKKYVEMYLASDTKPDEEPPRVIYEHVNDRWDVAFA-VSDGQFK-QVSFVNN 362
Query: 258 IRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEF 317
I TI GGTH+ V + ++ + KK ++K + ++ + ++ ++ NP F
Sbjct: 363 ISTIRGGTHVNYVANKIVDAIDEVVKK----ENKKAPVKAFQIKNYVQVFVNCQIENPSF 418
Query: 318 EGQTKTRLGNPEVRKVVDQSVQEYLTE-YLELHPDVXXXXXXXXXXXXXXXXXXXXXXXX 376
+ QTK L KV Q L++ +L+
Sbjct: 419 DSQTKETL----TTKVSAFGSQCTLSDKFLKAIKKSSVVEEVLKFATAKADQQLSKGDGG 474
Query: 377 VRQKSVLRSSSLPGKLADCSSTTPEESE---IFIVEGDSAGGSAKQGRD---RRFQAILP 430
+R R + L KL D + +ES + + EGDSA A G R + + P
Sbjct: 475 LRS----RITGLT-KLEDANKAGTKESHKCVLILTEGDSAKSLAVSGLSVVGRDYYGVFP 529
Query: 431 LRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAH 490
LRGK+LNV + + N+EIQ + + +G K + LRY ++I+TD D DG+H
Sbjct: 530 LRGKLLNVREASHSQILNNKEIQAIKKIMGFTHKKTYTDVKGLRYGHLMIMTDQDHDGSH 589
Query: 491 IRTLLLTFFYR-YQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNAL 549
I+ L++ + Y L G + + P+ K RG QVQ Y E + K + +
Sbjct: 590 IKGLIINYLESSYPSLLQIPGFLIQFITPIIKCTRGNQVQAFYTLPEYEYWKEANNNGRG 649
Query: 550 YSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQ 609
+ I+ +KGLG + ++ + R +K +A ++ + + D RKE ++
Sbjct: 650 WKIKYYKGLGTSDHDDM-KSYFSDLDRHMKYFHAMQEKDAELIEMAFAKKKADVRKEWLR 708
Query: 610 NAANLVNLDH 619
+ +D+
Sbjct: 709 TYRPGIYMDY 718
Score = 79 (32.9 bits), Expect = 9.7e-24, Sum P(2) = 9.7e-24
Identities = 18/51 (35%), Positives = 33/51 (64%)
Query: 10 GLHHLVYEILDNAVD-EAQAGYASNIEVALLAD-NSVSVADNGRGIPIDLH 58
GL+ + EI+ NA D + + + ++V L + N +S+ +NG+GIPI++H
Sbjct: 125 GLYKIFDEIIVNAADNKVRDPNMNTLKVTLDPEANVISIYNNGKGIPIEIH 175
>UNIPROTKB|F1MU48 [details] [associations]
symbol:TOP2B "DNA topoisomerase 2" species:9913 "Bos
taurus" [GO:0071778 "WINAC complex" evidence=IEA] [GO:0046982
"protein heterodimerization activity" evidence=IEA] [GO:0042826
"histone deacetylase binding" evidence=IEA] [GO:0030900 "forebrain
development" evidence=IEA] [GO:0008022 "protein C-terminus binding"
evidence=IEA] [GO:0007409 "axonogenesis" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA]
[GO:0005080 "protein kinase C binding" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0001764 "neuron migration"
evidence=IEA] [GO:0000792 "heterochromatin" evidence=IEA]
[GO:0003918 "DNA topoisomerase type II (ATP-hydrolyzing) activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006265
"DNA topological change" evidence=IEA] InterPro:IPR001241
InterPro:IPR002205 InterPro:IPR003594 InterPro:IPR012542
InterPro:IPR013506 InterPro:IPR013757 InterPro:IPR013758
InterPro:IPR013759 InterPro:IPR013760 InterPro:IPR018522
Pfam:PF00204 Pfam:PF00521 Pfam:PF02518 Pfam:PF08070 PRINTS:PR00418
PROSITE:PS00177 SMART:SM00387 SMART:SM00433 SMART:SM00434
Pfam:PF01751 InterPro:IPR006171 GO:GO:0005829 GO:GO:0005524
GO:GO:0001764 GO:GO:0005654 GO:GO:0030900 GO:GO:0003682
GO:GO:0007409 Gene3D:3.30.565.10 SUPFAM:SSF55874 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211
Gene3D:3.30.1360.40 InterPro:IPR024946 GO:GO:0000792 GO:GO:0071778
GO:GO:0006265 GO:GO:0003918 Gene3D:3.90.199.10 SUPFAM:SSF56719
Gene3D:1.10.268.10 Gene3D:3.40.50.670 GeneTree:ENSGT00390000016222
OMA:AKEYFQD EMBL:DAAA02061099 EMBL:DAAA02061100 EMBL:DAAA02061101
EMBL:DAAA02061102 IPI:IPI01003475 Ensembl:ENSBTAT00000006030
Uniprot:F1MU48
Length = 1599
Score = 288 (106.4 bits), Expect = 1.0e-23, Sum P(2) = 1.0e-23
Identities = 105/375 (28%), Positives = 165/375 (44%)
Query: 252 LGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDK-DISLSGEHVREGLTCIISV 310
+ + NSI T GG H++ V + L + KK K+K +S+ V+ + I+
Sbjct: 311 ISFVNSIATTKGGRHVDYVVDQVVGKLIEVVKK----KNKAGVSVKPFQVKNHIWVFINC 366
Query: 311 RVPNPEFEGQTKTRLG-NPEVRKVVDQSVQEYLTE-YLELHPDVXXXXXXXXXXXXXXXX 368
+ NP F+ QTK + P K Q L+E + + +
Sbjct: 367 LIENPTFDSQTKENMTLQP---KSFGSKCQ--LSEKFFKAASNCGIVESILNWVKFKAQT 421
Query: 369 XXXXXXXXVRQKSVLRSSSLPGKLADCSSTTPEES---EIFIVEGDSA-----GGSAKQG 420
V+ + +P KL D + + S + + EGDSA G G
Sbjct: 422 QLNKKCSSVKYSKI---KGIP-KLDDANDAGGKHSLECTLILTEGDSAKSLAVSGLGVIG 477
Query: 421 RDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKG--EDFKK-EALRYHK 477
RDR + PLRGKILNV + +N EI N+I+ +GL K +D + + LRY K
Sbjct: 478 RDR--YGVFPLRGKILNVREASHKQIMENAEINNIIKIVGLQYKKSYDDAESLKTLRYGK 535
Query: 478 IIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAEL 537
I+I+TD D DG+HI+ LL+ F + +L G + + P+ K + KQ Y E
Sbjct: 536 IMIMTDQDQDGSHIKGLLINFIHHNWPSLLKHGFLEEFITPIVKASKNKQELSFYSIPEF 595
Query: 538 KKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQ-RMLKQLV-IEDAAEANVVFSS 595
+ K + + I+ +KGLG + E + E+ R+L + ED A + FS
Sbjct: 596 DEWKKHIENQKAWKIKYYKGLGTSTAKEAKEYFADMERHRILFRYAGPEDDAAITLAFSK 655
Query: 596 LMGARVDTRKELIQN 610
++D RKE + N
Sbjct: 656 ---KKIDDRKEWLTN 667
Score = 71 (30.1 bits), Expect = 1.0e-23, Sum P(2) = 1.0e-23
Identities = 19/51 (37%), Positives = 30/51 (58%)
Query: 10 GLHHLVYEILDNAVDEAQAGYASN-IEVALLAD-NSVSVADNGRGIPIDLH 58
GL+ + EIL NA D Q I+V++ + N +S+ +NG+GIP+ H
Sbjct: 78 GLYKIFDEILVNAADNKQRDKNMTCIKVSIDPESNIISIWNNGKGIPVVEH 128
>UNIPROTKB|F1PRA7 [details] [associations]
symbol:TOP2B "DNA topoisomerase 2" species:9615 "Canis
lupus familiaris" [GO:0071778 "WINAC complex" evidence=IEA]
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
[GO:0042826 "histone deacetylase binding" evidence=IEA] [GO:0030900
"forebrain development" evidence=IEA] [GO:0008022 "protein
C-terminus binding" evidence=IEA] [GO:0007409 "axonogenesis"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0005654
"nucleoplasm" evidence=IEA] [GO:0005080 "protein kinase C binding"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0001764 "neuron migration" evidence=IEA] [GO:0000792
"heterochromatin" evidence=IEA] [GO:0003918 "DNA topoisomerase type
II (ATP-hydrolyzing) activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0006265 "DNA topological change"
evidence=IEA] InterPro:IPR001241 InterPro:IPR002205
InterPro:IPR003594 InterPro:IPR012542 InterPro:IPR013506
InterPro:IPR013757 InterPro:IPR013758 InterPro:IPR013759
InterPro:IPR013760 InterPro:IPR018522 Pfam:PF00204 Pfam:PF00521
Pfam:PF02518 Pfam:PF08070 PRINTS:PR00418 PROSITE:PS00177
SMART:SM00387 SMART:SM00433 SMART:SM00434 Pfam:PF01751
InterPro:IPR006171 GO:GO:0005829 GO:GO:0005524 GO:GO:0001764
GO:GO:0005654 GO:GO:0030900 GO:GO:0003682 GO:GO:0007409
Gene3D:3.30.565.10 SUPFAM:SSF55874 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211
Gene3D:3.30.1360.40 InterPro:IPR024946 GO:GO:0000792 GO:GO:0071778
GO:GO:0006265 GO:GO:0003918 Gene3D:3.90.199.10 SUPFAM:SSF56719
Gene3D:1.10.268.10 Gene3D:3.40.50.670 GeneTree:ENSGT00390000016222
OMA:AKEYFQD EMBL:AAEX03013556 Ensembl:ENSCAFT00000009221
Uniprot:F1PRA7
Length = 1602
Score = 288 (106.4 bits), Expect = 1.0e-23, Sum P(2) = 1.0e-23
Identities = 105/375 (28%), Positives = 165/375 (44%)
Query: 252 LGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDK-DISLSGEHVREGLTCIISV 310
+ + NSI T GG H++ V + L + KK K+K +S+ V+ + I+
Sbjct: 309 ISFVNSIATTKGGRHVDYVVDQVVGKLIEVVKK----KNKAGVSVKPFQVKNHIWVFINC 364
Query: 311 RVPNPEFEGQTKTRLG-NPEVRKVVDQSVQEYLTE-YLELHPDVXXXXXXXXXXXXXXXX 368
+ NP F+ QTK + P K Q L+E + + +
Sbjct: 365 LIENPTFDSQTKENMTLQP---KSFGSKCQ--LSEKFFKAASNCGIVESILNWVKFKAQT 419
Query: 369 XXXXXXXXVRQKSVLRSSSLPGKLADCSSTTPEES---EIFIVEGDSA-----GGSAKQG 420
V+ + +P KL D + + S + + EGDSA G G
Sbjct: 420 QLNKKCSSVKYSKI---KGIP-KLDDANDAGGKHSLECTLILTEGDSAKSLAVSGLGVIG 475
Query: 421 RDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKG--EDFKK-EALRYHK 477
RDR + PLRGKILNV + +N EI N+I+ +GL K +D + + LRY K
Sbjct: 476 RDR--YGVFPLRGKILNVREASHKQIMENAEINNIIKIVGLQYKKSYDDAESLKTLRYGK 533
Query: 478 IIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAEL 537
I+I+TD D DG+HI+ LL+ F + +L G + + P+ K + KQ Y E
Sbjct: 534 IMIMTDQDQDGSHIKGLLINFIHHNWPSLLKHGFLEEFITPIVKASKNKQELSFYSIPEF 593
Query: 538 KKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQ-RMLKQLV-IEDAAEANVVFSS 595
+ K + + I+ +KGLG + E + E+ R+L + ED A + FS
Sbjct: 594 DEWKKHIENQKAWKIKYYKGLGTSTAKEAKEYFADMERHRILFRYAGPEDDAAITLAFSK 653
Query: 596 LMGARVDTRKELIQN 610
++D RKE + N
Sbjct: 654 ---KKIDDRKEWLTN 665
Score = 71 (30.1 bits), Expect = 1.0e-23, Sum P(2) = 1.0e-23
Identities = 19/51 (37%), Positives = 30/51 (58%)
Query: 10 GLHHLVYEILDNAVDEAQAGYASN-IEVALLAD-NSVSVADNGRGIPIDLH 58
GL+ + EIL NA D Q I+V++ + N +S+ +NG+GIP+ H
Sbjct: 78 GLYKIFDEILVNAADNKQRDKNMTCIKVSIDPESNIISIWNNGKGIPVVEH 128
>UNIPROTKB|Q64399 [details] [associations]
symbol:TOP2B "DNA topoisomerase 2-beta" species:10030
"Cricetulus longicaudatus" [GO:0003918 "DNA topoisomerase type II
(ATP-hydrolyzing) activity" evidence=ISS] [GO:0006265 "DNA
topological change" evidence=ISS] InterPro:IPR001241
InterPro:IPR002205 InterPro:IPR003594 InterPro:IPR012542
InterPro:IPR013506 InterPro:IPR013757 InterPro:IPR013758
InterPro:IPR013759 InterPro:IPR013760 InterPro:IPR018522
Pfam:PF00204 Pfam:PF00521 Pfam:PF02518 Pfam:PF08070 PRINTS:PR00418
PROSITE:PS00177 SMART:SM00387 SMART:SM00433 SMART:SM00434
Pfam:PF01751 InterPro:IPR006171 GO:GO:0005524 GO:GO:0005694
GO:GO:0005730 Gene3D:3.30.565.10 SUPFAM:SSF55874 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211
Gene3D:3.30.1360.40 InterPro:IPR024946 GO:GO:0006265 GO:GO:0003918
Gene3D:3.90.199.10 SUPFAM:SSF56719 Gene3D:1.10.268.10
Gene3D:3.40.50.670 PROSITE:PS50880 HOVERGEN:HBG052998 EMBL:X86455
ProteinModelPortal:Q64399 SMR:Q64399 PRIDE:Q64399 Uniprot:Q64399
Length = 1612
Score = 288 (106.4 bits), Expect = 1.1e-23, Sum P(2) = 1.1e-23
Identities = 105/375 (28%), Positives = 165/375 (44%)
Query: 252 LGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDK-DISLSGEHVREGLTCIISV 310
+ + NSI T GG H++ V + L + KK K+K +S+ V+ + I+
Sbjct: 320 ISFVNSIATTKGGRHVDYVVDQVVGKLIEVVKK----KNKAGVSVKPFQVKNHIWVFINC 375
Query: 311 RVPNPEFEGQTKTRLG-NPEVRKVVDQSVQEYLTE-YLELHPDVXXXXXXXXXXXXXXXX 368
+ NP F+ QTK + P K Q L+E + + +
Sbjct: 376 LIENPTFDSQTKENMTLQP---KSFGSKCQ--LSEKFFKAASNCGIVESILNWVKFKAQT 430
Query: 369 XXXXXXXXVRQKSVLRSSSLPGKLADCSSTTPEES---EIFIVEGDSA-----GGSAKQG 420
V+ + +P KL D + + S + + EGDSA G G
Sbjct: 431 QLNKKCSSVKYSKI---KGIP-KLDDANDAGGKHSLECTLILTEGDSAKSLAVSGLGVIG 486
Query: 421 RDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKG--EDFKK-EALRYHK 477
RDR + PLRGKILNV + +N EI N+I+ +GL K +D + + LRY K
Sbjct: 487 RDR--YGVFPLRGKILNVREASHKQIMENAEINNIIKIVGLQYKKSYDDAESLKTLRYGK 544
Query: 478 IIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAEL 537
I+I+TD D DG+HI+ LL+ F + +L G + + P+ K + KQ Y E
Sbjct: 545 IMIMTDQDQDGSHIKGLLINFIHHNWPSLLKHGFLEEFITPIVKASKNKQELSFYSIPEF 604
Query: 538 KKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQ-RMLKQLV-IEDAAEANVVFSS 595
+ K + + I+ +KGLG + E + E+ R+L + ED A + FS
Sbjct: 605 DEWKKHIENQKAWKIKYYKGLGTSTAKEAKEYFADMERHRILFRYAGPEDDAAITLAFSK 664
Query: 596 LMGARVDTRKELIQN 610
++D RKE + N
Sbjct: 665 ---KKIDDRKEWLTN 676
Score = 71 (30.1 bits), Expect = 1.1e-23, Sum P(2) = 1.1e-23
Identities = 19/51 (37%), Positives = 30/51 (58%)
Query: 10 GLHHLVYEILDNAVDEAQAGYASN-IEVALLAD-NSVSVADNGRGIPIDLH 58
GL+ + EIL NA D Q I+V++ + N +S+ +NG+GIP+ H
Sbjct: 89 GLYKIFDEILVNAADNKQRDKNMTCIKVSIDPESNIISIWNNGKGIPVVEH 139
>UNIPROTKB|F1RS45 [details] [associations]
symbol:TOP2B "DNA topoisomerase 2" species:9823 "Sus
scrofa" [GO:0071778 "WINAC complex" evidence=IEA] [GO:0046982
"protein heterodimerization activity" evidence=IEA] [GO:0042826
"histone deacetylase binding" evidence=IEA] [GO:0030900 "forebrain
development" evidence=IEA] [GO:0008022 "protein C-terminus binding"
evidence=IEA] [GO:0007409 "axonogenesis" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA]
[GO:0005080 "protein kinase C binding" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0001764 "neuron migration"
evidence=IEA] [GO:0000792 "heterochromatin" evidence=IEA]
[GO:0003918 "DNA topoisomerase type II (ATP-hydrolyzing) activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006265
"DNA topological change" evidence=IEA] InterPro:IPR001241
InterPro:IPR002205 InterPro:IPR003594 InterPro:IPR012542
InterPro:IPR013506 InterPro:IPR013757 InterPro:IPR013758
InterPro:IPR013759 InterPro:IPR013760 InterPro:IPR018522
Pfam:PF00204 Pfam:PF00521 Pfam:PF02518 Pfam:PF08070 PRINTS:PR00418
PROSITE:PS00177 SMART:SM00387 SMART:SM00433 SMART:SM00434
Pfam:PF01751 InterPro:IPR006171 GO:GO:0005829 GO:GO:0005524
GO:GO:0001764 GO:GO:0005654 GO:GO:0030900 GO:GO:0003682
GO:GO:0007409 Gene3D:3.30.565.10 SUPFAM:SSF55874 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211
Gene3D:3.30.1360.40 InterPro:IPR024946 GO:GO:0000792 GO:GO:0071778
GO:GO:0006265 GO:GO:0003918 Gene3D:3.90.199.10 SUPFAM:SSF56719
Gene3D:1.10.268.10 Gene3D:3.40.50.670 GeneTree:ENSGT00390000016222
OMA:AKEYFQD EMBL:CU582923 Ensembl:ENSSSCT00000012279
ArrayExpress:F1RS45 Uniprot:F1RS45
Length = 1615
Score = 288 (106.4 bits), Expect = 1.1e-23, Sum P(2) = 1.1e-23
Identities = 105/375 (28%), Positives = 165/375 (44%)
Query: 252 LGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDK-DISLSGEHVREGLTCIISV 310
+ + NSI T GG H++ V + L + KK K+K +S+ V+ + I+
Sbjct: 324 ISFVNSIATTKGGRHVDYVVDQVVGKLIEVVKK----KNKAGVSVKPFQVKNHIWVFINC 379
Query: 311 RVPNPEFEGQTKTRLG-NPEVRKVVDQSVQEYLTE-YLELHPDVXXXXXXXXXXXXXXXX 368
+ NP F+ QTK + P K Q L+E + + +
Sbjct: 380 LIENPTFDSQTKENMTLQP---KSFGSKCQ--LSEKFFKAASNCGIVESILNWVKFKAQT 434
Query: 369 XXXXXXXXVRQKSVLRSSSLPGKLADCSSTTPEES---EIFIVEGDSA-----GGSAKQG 420
V+ + +P KL D + + S + + EGDSA G G
Sbjct: 435 QLNKKCSSVKYSKI---KGIP-KLDDANDAGGKHSLECTLILTEGDSAKSLAVSGLGVIG 490
Query: 421 RDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKG--EDFKK-EALRYHK 477
RDR + PLRGKILNV + +N EI N+I+ +GL K +D + + LRY K
Sbjct: 491 RDR--YGVFPLRGKILNVREASHKQIMENAEINNIIKIVGLQYKKSYDDAESLKTLRYGK 548
Query: 478 IIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAEL 537
I+I+TD D DG+HI+ LL+ F + +L G + + P+ K + KQ Y E
Sbjct: 549 IMIMTDQDQDGSHIKGLLINFIHHNWPSLLKHGFLEEFITPIVKASKNKQELAFYSIPEF 608
Query: 538 KKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQ-RMLKQLV-IEDAAEANVVFSS 595
+ K + + I+ +KGLG + E + E+ R+L + ED A + FS
Sbjct: 609 DEWKKHIENQKAWKIKYYKGLGTSTAKEAKEYFADMERHRILFRYAGPEDDAAITLAFSK 668
Query: 596 LMGARVDTRKELIQN 610
++D RKE + N
Sbjct: 669 ---KKIDDRKEWLTN 680
Score = 71 (30.1 bits), Expect = 1.1e-23, Sum P(2) = 1.1e-23
Identities = 19/51 (37%), Positives = 30/51 (58%)
Query: 10 GLHHLVYEILDNAVDEAQAGYASN-IEVALLAD-NSVSVADNGRGIPIDLH 58
GL+ + EIL NA D Q I+V++ + N +S+ +NG+GIP+ H
Sbjct: 93 GLYKIFDEILVNAADNKQRDKNMTCIKVSIDPESNIISIWNNGKGIPVVEH 143
>UNIPROTKB|Q02880 [details] [associations]
symbol:TOP2B "DNA topoisomerase 2-beta" species:9606 "Homo
sapiens" [GO:0005524 "ATP binding" evidence=IEA] [GO:0046872 "metal
ion binding" evidence=IEA] [GO:0001764 "neuron migration"
evidence=IEA] [GO:0007409 "axonogenesis" evidence=IEA] [GO:0030900
"forebrain development" evidence=IEA] [GO:0000712 "resolution of
meiotic recombination intermediates" evidence=IBA] [GO:0000795
"synaptonemal complex" evidence=IBA] [GO:0000819 "sister chromatid
segregation" evidence=IBA] [GO:0003918 "DNA topoisomerase type II
(ATP-hydrolyzing) activity" evidence=IDA;IBA] [GO:0006261
"DNA-dependent DNA replication" evidence=IBA] [GO:0006265 "DNA
topological change" evidence=IDA;IBA] [GO:0006312 "mitotic
recombination" evidence=IBA] [GO:0007059 "chromosome segregation"
evidence=IBA] [GO:0009295 "nucleoid" evidence=IBA] [GO:0005080
"protein kinase C binding" evidence=IPI] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0042826
"histone deacetylase binding" evidence=IPI] [GO:0000792
"heterochromatin" evidence=IDA] [GO:0003682 "chromatin binding"
evidence=IDA] [GO:0005654 "nucleoplasm" evidence=IDA] [GO:0008022
"protein C-terminus binding" evidence=IPI] [GO:0046982 "protein
heterodimerization activity" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0019899 "enzyme binding" evidence=IPI]
[GO:0071778 "WINAC complex" evidence=IDA] InterPro:IPR001241
InterPro:IPR002205 InterPro:IPR003594 InterPro:IPR012542
InterPro:IPR013506 InterPro:IPR013757 InterPro:IPR013758
InterPro:IPR013759 InterPro:IPR013760 InterPro:IPR018522
Pfam:PF00204 Pfam:PF00521 Pfam:PF02518 Pfam:PF08070 PRINTS:PR00418
PROSITE:PS00177 SMART:SM00387 SMART:SM00433 SMART:SM00434
Pfam:PF01751 InterPro:IPR006171 GO:GO:0005829 GO:GO:0005524
GO:GO:0001764 GO:GO:0005654 GO:GO:0030900 GO:GO:0003682
GO:GO:0006261 GO:GO:0007409 Gene3D:3.30.565.10 SUPFAM:SSF55874
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 Gene3D:3.30.1360.40 InterPro:IPR024946
GO:GO:0000819 GO:GO:0006312 GO:GO:0071778 GO:GO:0070683
GO:GO:0000712 GO:GO:0000795 GO:GO:0006265 GO:GO:0003918
Gene3D:3.90.199.10 SUPFAM:SSF56719 Gene3D:1.10.268.10
eggNOG:COG0187 Gene3D:3.40.50.670 PROSITE:PS50880 KO:K03164
HOGENOM:HOG000216693 HOVERGEN:HBG052998 CTD:7155 EMBL:X68060
EMBL:X71911 EMBL:Z15111 EMBL:Z15115 EMBL:M27504 EMBL:AJ011721
EMBL:AJ011722 EMBL:AJ011723 EMBL:AJ011724 EMBL:AJ011725
EMBL:AJ011726 EMBL:AJ011727 EMBL:AJ011728 EMBL:AJ011729
EMBL:AJ011730 EMBL:AJ011731 EMBL:AJ011732 EMBL:X53662 EMBL:U54831
IPI:IPI00027280 IPI:IPI00217709 PIR:S26730 RefSeq:NP_001059.2
UniGene:Hs.475733 PDB:3QX3 PDBsum:3QX3 ProteinModelPortal:Q02880
SMR:Q02880 IntAct:Q02880 STRING:Q02880 PhosphoSite:Q02880
DMDM:20141946 PaxDb:Q02880 PRIDE:Q02880 Ensembl:ENST00000264331
Ensembl:ENST00000435706 GeneID:7155 KEGG:hsa:7155 UCSC:uc003cdj.2
UCSC:uc011awn.1 GeneCards:GC03M025639 H-InvDB:HIX0030807
HGNC:HGNC:11990 HPA:CAB004601 HPA:HPA024120 MIM:126431
neXtProt:NX_Q02880 PharmGKB:PA36672 InParanoid:Q02880 OMA:AKEYFQD
PhylomeDB:Q02880 BindingDB:Q02880 ChEMBL:CHEMBL3396 ChiTaRS:TOP2B
GenomeRNAi:7155 NextBio:27998 ArrayExpress:Q02880 Bgee:Q02880
CleanEx:HS_TOP2B Genevestigator:Q02880 GermOnline:ENSG00000077097
Uniprot:Q02880
Length = 1626
Score = 288 (106.4 bits), Expect = 1.1e-23, Sum P(2) = 1.1e-23
Identities = 105/375 (28%), Positives = 165/375 (44%)
Query: 252 LGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDK-DISLSGEHVREGLTCIISV 310
+ + NSI T GG H++ V + L + KK K+K +S+ V+ + I+
Sbjct: 332 ISFVNSIATTKGGRHVDYVVDQVVGKLIEVVKK----KNKAGVSVKPFQVKNHIWVFINC 387
Query: 311 RVPNPEFEGQTKTRLG-NPEVRKVVDQSVQEYLTE-YLELHPDVXXXXXXXXXXXXXXXX 368
+ NP F+ QTK + P K Q L+E + + +
Sbjct: 388 LIENPTFDSQTKENMTLQP---KSFGSKCQ--LSEKFFKAASNCGIVESILNWVKFKAQT 442
Query: 369 XXXXXXXXVRQKSVLRSSSLPGKLADCSSTTPEES---EIFIVEGDSA-----GGSAKQG 420
V+ + +P KL D + + S + + EGDSA G G
Sbjct: 443 QLNKKCSSVKYSKI---KGIP-KLDDANDAGGKHSLECTLILTEGDSAKSLAVSGLGVIG 498
Query: 421 RDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKG--EDFKK-EALRYHK 477
RDR + PLRGKILNV + +N EI N+I+ +GL K +D + + LRY K
Sbjct: 499 RDR--YGVFPLRGKILNVREASHKQIMENAEINNIIKIVGLQYKKSYDDAESLKTLRYGK 556
Query: 478 IIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAEL 537
I+I+TD D DG+HI+ LL+ F + +L G + + P+ K + KQ Y E
Sbjct: 557 IMIMTDQDQDGSHIKGLLINFIHHNWPSLLKHGFLEEFITPIVKASKNKQELSFYSIPEF 616
Query: 538 KKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQ-RMLKQLV-IEDAAEANVVFSS 595
+ K + + I+ +KGLG + E + E+ R+L + ED A + FS
Sbjct: 617 DEWKKHIENQKAWKIKYYKGLGTSTAKEAKEYFADMERHRILFRYAGPEDDAAITLAFSK 676
Query: 596 LMGARVDTRKELIQN 610
++D RKE + N
Sbjct: 677 ---KKIDDRKEWLTN 688
Score = 71 (30.1 bits), Expect = 1.1e-23, Sum P(2) = 1.1e-23
Identities = 19/51 (37%), Positives = 30/51 (58%)
Query: 10 GLHHLVYEILDNAVDEAQAGYASN-IEVALLAD-NSVSVADNGRGIPIDLH 58
GL+ + EIL NA D Q I+V++ + N +S+ +NG+GIP+ H
Sbjct: 101 GLYKIFDEILVNAADNKQRDKNMTCIKVSIDPESNIISIWNNGKGIPVVEH 151
>UNIPROTKB|Q755V8 [details] [associations]
symbol:AER410W "DNA topoisomerase 2" species:284811 "Ashbya
gossypii ATCC 10895" [GO:0000712 "resolution of meiotic
recombination intermediates" evidence=IBA] [GO:0000795
"synaptonemal complex" evidence=IBA] [GO:0000819 "sister chromatid
segregation" evidence=IBA] [GO:0003918 "DNA topoisomerase type II
(ATP-hydrolyzing) activity" evidence=IBA] [GO:0006261
"DNA-dependent DNA replication" evidence=IBA] [GO:0006265 "DNA
topological change" evidence=IBA] [GO:0006312 "mitotic
recombination" evidence=IBA] [GO:0007059 "chromosome segregation"
evidence=IBA] [GO:0009295 "nucleoid" evidence=IBA]
InterPro:IPR001241 InterPro:IPR002205 InterPro:IPR003594
InterPro:IPR013506 InterPro:IPR013757 InterPro:IPR013758
InterPro:IPR013759 InterPro:IPR013760 InterPro:IPR018522
Pfam:PF00204 Pfam:PF00521 Pfam:PF02518 PRINTS:PR00418
PROSITE:PS00177 SMART:SM00387 SMART:SM00433 SMART:SM00434
Pfam:PF01751 InterPro:IPR006171 GO:GO:0005524 GO:GO:0006261
Gene3D:3.30.565.10 SUPFAM:SSF55874 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211
Gene3D:3.30.1360.40 InterPro:IPR024946 GO:GO:0000819 GO:GO:0006312
EMBL:AE016818 GenomeReviews:AE016818_GR GO:GO:0070683 GO:GO:0000712
GO:GO:0000795 GO:GO:0006265 GO:GO:0003918 Gene3D:3.90.199.10
SUPFAM:SSF56719 Gene3D:1.10.268.10 Gene3D:3.40.50.670 KO:K03164
HOGENOM:HOG000216693 OMA:AKEYFQD OrthoDB:EOG4XPTPZ
RefSeq:NP_985265.1 ProteinModelPortal:Q755V8 SMR:Q755V8
STRING:Q755V8 EnsemblFungi:AAS53089 GeneID:4621483
KEGG:ago:AGOS_AER410W PhylomeDB:Q755V8 Uniprot:Q755V8
Length = 1427
Score = 306 (112.8 bits), Expect = 1.3e-23, P = 1.3e-23
Identities = 166/651 (25%), Positives = 264/651 (40%)
Query: 10 GLHHLVYEILDNAVD-EAQAGYASNIEVAL-LADNSVSVADNGRGIPIDLHPATNKSALE 67
GL + EI+ NA D + + IEV + +N + V ++G GIPI++H E
Sbjct: 62 GLFKIFDEIIVNAADNKVRDPSMKKIEVVINREENYIEVKNDGNGIPIEVHAKEGIYIPE 121
Query: 68 TVLTVLHAXXXXXXXXXXXXXXXXXXXXXXXXXNALSES--LEVTVWRDGMEYHQKYSRG 125
+ H N S LE + + G +Y QK+
Sbjct: 122 LIFG--HLLTSSNYDDNEKKVTGGRNGYGAKLCNIFSTEFILETSDPKSGQKYVQKWESN 179
Query: 126 KPVTTLTCHVLPVDS--KDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLT 183
V CH + S K T+I F PD Q F + D I G +R + +
Sbjct: 180 MNV----CHPPKITSYKKGPSYTKITFKPDLQRFGMEVLDDD--ILGVMRRRVY---DIN 230
Query: 184 IALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKD-----VDGITI-- 236
++R + F +E Y++ L +KK L D G + V+ TI
Sbjct: 231 GSVRDVNVSLNGKSLKIRNFKSYMELYMRSL--EKKRLIDS-GMAPESASEKVNAPTILY 287
Query: 237 -DLALQW-CSDAYSDT---MLGYANSIRTIDGGTHIEGVKASLTRTLNSL-GKKSKTVKD 290
+ +W A SD + + NSI T GGTH+ + + + ++ L KK KTVK
Sbjct: 288 EKVNDRWELGFAVSDISFQQISFVNSIATTSGGTHVNYLTDQIVKKVSELLSKKKKTVKP 347
Query: 291 KDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHP 350
I R + I+ + NP F QTK +L V+++ ++ E+
Sbjct: 348 FQI-------RNNIFIFINCLIENPAFTSQTKEQLTT---------RVRDFGSK-CEVSS 390
Query: 351 DVXXXXXXXXXXXXXXXXXXXXXXXXVRQKSVLRSSSLPG--KLADCSSTTPEESE---I 405
D ++Q R + + KL D + +E +
Sbjct: 391 DFINKIMKTELATKIFEIADENAAKLLKQTDGTRKNRITDYPKLEDANKAGTKEGHKCTL 450
Query: 406 FIVEGDSA-----GGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALG 460
+ EGDSA G + GRD + PL+GKILNV + KN EIQ + + +G
Sbjct: 451 VLTEGDSALSLAVAGLSVVGRD--YYGCFPLKGKILNVRDASVEQIRKNTEIQAIKKIMG 508
Query: 461 LGVKG----EDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFD-EGCIYVG 515
L K ED K LRY ++I+TD D DG+HI+ LL+ FF L D G +
Sbjct: 509 LQHKKQYTIEDMK--TLRYGHVMIMTDQDHDGSHIKGLLINFFESTFPGLLDIPGFLIEF 566
Query: 516 VPPLYKV---ERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLG--EMMPVQLWETT 570
+ P+ KV + KQV Y+ + +K + + ++ + +KGLG + + +
Sbjct: 567 ITPIMKVTILKPKKQVIPFYNLPDYEKWRDTESHKYVWKTKYYKGLGTSSFQEAREYFSA 626
Query: 571 LNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLD-HL 620
L+ + L +D++ ++ FS + D RKE ++ LD HL
Sbjct: 627 LDVHIKKFHSLNPDDSSLIDLAFSK---KKADDRKEWLRQYEPGTVLDPHL 674
>UNIPROTKB|F1M7A0 [details] [associations]
symbol:Top2a "DNA topoisomerase 2" species:10116 "Rattus
norvegicus" [GO:0003918 "DNA topoisomerase type II
(ATP-hydrolyzing) activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005694
"chromosome" evidence=IEA] [GO:0006265 "DNA topological change"
evidence=IEA] InterPro:IPR001241 InterPro:IPR002205
InterPro:IPR003594 InterPro:IPR012542 InterPro:IPR013506
InterPro:IPR013757 InterPro:IPR013758 InterPro:IPR013759
InterPro:IPR013760 InterPro:IPR018522 Pfam:PF00204 Pfam:PF00521
Pfam:PF02518 Pfam:PF08070 PRINTS:PR00418 PROSITE:PS00177
SMART:SM00387 SMART:SM00433 SMART:SM00434 Pfam:PF01751
InterPro:IPR006171 GO:GO:0005524 GO:GO:0007059 GO:GO:0005654
GO:GO:0005730 GO:GO:0005814 GO:GO:0008144 GO:GO:0045944
GO:GO:0003682 GO:GO:0040016 GO:GO:0006974 GO:GO:0043065
GO:GO:0030263 Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0000793
GO:GO:0006266 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 Gene3D:3.30.1360.40
InterPro:IPR024946 GO:GO:0000228 GO:GO:0009330 GO:GO:0006265
GO:GO:0003918 Gene3D:3.90.199.10 SUPFAM:SSF56719 Gene3D:1.10.268.10
Gene3D:3.40.50.670 GO:GO:0045870 GeneTree:ENSGT00390000016222
IPI:IPI00562522 Ensembl:ENSRNOT00000050725 ArrayExpress:F1M7A0
Uniprot:F1M7A0
Length = 1528
Score = 270 (100.1 bits), Expect = 1.6e-23, Sum P(3) = 1.6e-23
Identities = 77/228 (33%), Positives = 114/228 (50%)
Query: 394 DCSSTTPEESEIFIVEGDSA-----GGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYK 448
D S E + + EGDSA G GRD+ + PLRGKILNV + +
Sbjct: 445 DAGSRNSAECTLILTEGDSAKTLAVSGLGVVGRDK--YGVFPLRGKILNVREASHKQIME 502
Query: 449 NEEIQNLIRALGLGVK----GEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQK 504
N EI N+I+ +GL K ED K LRY KI+I+TD D DG+HI+ LL+ F +
Sbjct: 503 NAEINNIIKIVGLQYKKNYEDEDSLK-TLRYGKIMIMTDQDQDGSHIKGLLINFIHHNWP 561
Query: 505 TLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPV 564
+L + + P+ KV + KQ Y E ++ KS+ P++ + ++ +KGLG
Sbjct: 562 SLLRHRFLEEFITPIVKVSKNKQEIAFYSLPEFEEWKSANPNHKKWKVKYYKGLGTSTSK 621
Query: 565 QLWETTLNPEQRML--KQLVIEDAAEANVVFSSLMGARVDTRKELIQN 610
+ E N ++ + K ED A ++ FS +VD RKE + N
Sbjct: 622 EAKEYFANMKRHRIQFKYSGPEDDAAISLAFSK---KQVDDRKEWLTN 666
Score = 80 (33.2 bits), Expect = 1.6e-23, Sum P(3) = 1.6e-23
Identities = 21/51 (41%), Positives = 31/51 (60%)
Query: 10 GLHHLVYEILDNAVDEAQAG-YASNIEVALLADNS-VSVADNGRGIPIDLH 58
GL+ + EIL NA D Q S I V + A+N+ +S+ +NG+GIP+ H
Sbjct: 79 GLYKIFDEILVNAADNKQRDPKMSCIRVTIDAENNLISIWNNGKGIPVVEH 129
Score = 53 (23.7 bits), Expect = 1.6e-23, Sum P(3) = 1.6e-23
Identities = 16/52 (30%), Positives = 29/52 (55%)
Query: 252 LGYANSIRTIDGGTHIEGVKASL-TRTLNSLGKKSKT-VKDKDISLSGEHVR 301
+ + NSI T GG H++ V + ++ ++ + KK+K V K L G H++
Sbjct: 310 ISFVNSIATSKGGRHVDYVADQIVSKLVDVVKKKNKGGVAVKAHQLPG-HIQ 360
>UNIPROTKB|O42130 [details] [associations]
symbol:TOP2A "DNA topoisomerase 2-alpha" species:9031
"Gallus gallus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0000712
"resolution of meiotic recombination intermediates" evidence=IBA]
[GO:0000795 "synaptonemal complex" evidence=IBA] [GO:0000819
"sister chromatid segregation" evidence=IBA] [GO:0003918 "DNA
topoisomerase type II (ATP-hydrolyzing) activity" evidence=ISS;IBA]
[GO:0006261 "DNA-dependent DNA replication" evidence=IBA]
[GO:0006265 "DNA topological change" evidence=ISS;IBA] [GO:0006312
"mitotic recombination" evidence=IBA] [GO:0007059 "chromosome
segregation" evidence=ISS;IBA] [GO:0009295 "nucleoid" evidence=IBA]
[GO:0000287 "magnesium ion binding" evidence=ISS] [GO:0008301 "DNA
binding, bending" evidence=ISS] [GO:0006974 "response to DNA damage
stimulus" evidence=ISS] [GO:0043065 "positive regulation of
apoptotic process" evidence=ISS] [GO:0006266 "DNA ligation"
evidence=ISS] [GO:0030263 "apoptotic chromosome condensation"
evidence=ISS] [GO:0008144 "drug binding" evidence=ISS] [GO:0003677
"DNA binding" evidence=ISS] [GO:0008094 "DNA-dependent ATPase
activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0005654 "nucleoplasm" evidence=ISS] [GO:0009330 "DNA
topoisomerase complex (ATP-hydrolyzing)" evidence=ISS]
InterPro:IPR001241 InterPro:IPR002205 InterPro:IPR003594
InterPro:IPR012542 InterPro:IPR013506 InterPro:IPR013757
InterPro:IPR013758 InterPro:IPR013759 InterPro:IPR013760
InterPro:IPR018522 Pfam:PF00204 Pfam:PF00521 Pfam:PF02518
Pfam:PF08070 PRINTS:PR00418 PROSITE:PS00177 SMART:SM00387
SMART:SM00433 SMART:SM00434 Pfam:PF01751 InterPro:IPR006171
GO:GO:0005524 GO:GO:0005654 GO:GO:0000287 GO:GO:0008144
GO:GO:0006974 GO:GO:0006261 GO:GO:0008301 GO:GO:0043065
GO:GO:0030263 Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0006266
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 Gene3D:3.30.1360.40 InterPro:IPR024946
GO:GO:0000819 GO:GO:0006312 GO:GO:0009330 GO:GO:0070683
GO:GO:0000712 GO:GO:0000795 GO:GO:0006265 GO:GO:0003918
Gene3D:3.90.199.10 SUPFAM:SSF56719 Gene3D:1.10.268.10
eggNOG:COG0187 Gene3D:3.40.50.670 PROSITE:PS50880 KO:K03164
EMBL:AB007445 IPI:IPI00822514 RefSeq:NP_990122.1 UniGene:Gga.2010
ProteinModelPortal:O42130 SMR:O42130 STRING:O42130 GeneID:395570
KEGG:gga:395570 CTD:7153 HOGENOM:HOG000216693 HOVERGEN:HBG052998
NextBio:20815644 Uniprot:O42130
Length = 1553
Score = 245 (91.3 bits), Expect = 1.8e-23, Sum P(3) = 1.8e-23
Identities = 72/227 (31%), Positives = 112/227 (49%)
Query: 394 DCSSTTPEESEIFIVEGDSA-----GGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYK 448
D S + + + EGDSA G GRD+ + PLRGK+LNV + +
Sbjct: 447 DAGSKNSIDCTLILTEGDSAKTLAVSGLGVVGRDK--YGVFPLRGKMLNVREASHKQIME 504
Query: 449 NEEIQNLIRALGLGVKG--EDFKK-EALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKT 505
N EI N+I+ +GL K ED + ++LRY KI+I+TD D DG+HI+ LL+ F + +
Sbjct: 505 NAEINNIIKIVGLQYKKNYEDRESLKSLRYGKIMIMTDQDQDGSHIKGLLINFIHHNWPS 564
Query: 506 LFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQ 565
L + + P+ KV + K+ Y E ++ KSS + + I+ +KGLG +
Sbjct: 565 LLRHNFLEEFITPIIKVSKNKEEIPFYSIPEFEEWKSSTQNYNSWKIKYYKGLGTSTSKE 624
Query: 566 LWETTLNPEQRML--KQLVIEDAAEANVVFSSLMGARVDTRKELIQN 610
E + + + K ED A + FS +V+ RKE + N
Sbjct: 625 AKEYFADMARHRIGFKYSGPEDDAAITLAFSK---KKVEERKEWLTN 668
Score = 81 (33.6 bits), Expect = 1.8e-23, Sum P(3) = 1.8e-23
Identities = 19/75 (25%), Positives = 38/75 (50%)
Query: 252 LGYANSIRTIDGGTHIEGVKASL-TRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISV 310
+ + NSI T GG H++ V + T+ ++ + KK+K + + V+ + ++
Sbjct: 312 VSFVNSIATTKGGRHVDYVADQIVTKLIDVVKKKNKN----GVGVKPFQVKNHMWIFVNS 367
Query: 311 RVPNPEFEGQTKTRL 325
+ NP F+ QTK +
Sbjct: 368 LIENPTFDSQTKENM 382
Score = 79 (32.9 bits), Expect = 1.8e-23, Sum P(3) = 1.8e-23
Identities = 21/51 (41%), Positives = 32/51 (62%)
Query: 10 GLHHLVYEILDNAVDEAQAGYA-SNIEVALLADNS-VSVADNGRGIPIDLH 58
GL+ + EIL NA D Q + S I+V + +N+ +SV +NG+GIP+ H
Sbjct: 81 GLYKIFDEILVNAADNKQRDKSMSCIKVTIDPENNTISVWNNGKGIPVVEH 131
>UNIPROTKB|E9PTY5 [details] [associations]
symbol:Top2a "DNA topoisomerase 2" species:10116 "Rattus
norvegicus" [GO:0003918 "DNA topoisomerase type II
(ATP-hydrolyzing) activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005694
"chromosome" evidence=IEA] [GO:0006265 "DNA topological change"
evidence=IEA] InterPro:IPR001241 InterPro:IPR002205
InterPro:IPR003594 InterPro:IPR012542 InterPro:IPR013506
InterPro:IPR013757 InterPro:IPR013758 InterPro:IPR013759
InterPro:IPR013760 InterPro:IPR018522 Pfam:PF00204 Pfam:PF00521
Pfam:PF02518 Pfam:PF08070 PRINTS:PR00418 PROSITE:PS00177
SMART:SM00387 SMART:SM00433 SMART:SM00434 Pfam:PF01751
InterPro:IPR006171 GO:GO:0005524 GO:GO:0005634 GO:GO:0005694
Gene3D:3.30.565.10 SUPFAM:SSF55874 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211
Gene3D:3.30.1360.40 InterPro:IPR024946 GO:GO:0006265 GO:GO:0003918
Gene3D:3.90.199.10 SUPFAM:SSF56719 Gene3D:1.10.268.10
Gene3D:3.40.50.670 IPI:IPI00193944 Ensembl:ENSRNOT00000044306
ArrayExpress:E9PTY5 Uniprot:E9PTY5
Length = 1526
Score = 270 (100.1 bits), Expect = 2.1e-23, Sum P(3) = 2.1e-23
Identities = 77/228 (33%), Positives = 114/228 (50%)
Query: 394 DCSSTTPEESEIFIVEGDSA-----GGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYK 448
D S E + + EGDSA G GRD+ + PLRGKILNV + +
Sbjct: 445 DAGSRNSAECTLILTEGDSAKTLAVSGLGVVGRDK--YGVFPLRGKILNVREASHKQIME 502
Query: 449 NEEIQNLIRALGLGVK----GEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQK 504
N EI N+I+ +GL K ED K LRY KI+I+TD D DG+HI+ LL+ F +
Sbjct: 503 NAEINNIIKIVGLQYKKNYEDEDSLK-TLRYGKIMIMTDQDQDGSHIKGLLINFIHHNWP 561
Query: 505 TLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPV 564
+L + + P+ KV + KQ Y E ++ KS+ P++ + ++ +KGLG
Sbjct: 562 SLLRHRFLEEFITPIVKVSKNKQEIAFYSLPEFEEWKSANPNHKKWKVKYYKGLGTSTSK 621
Query: 565 QLWETTLNPEQRML--KQLVIEDAAEANVVFSSLMGARVDTRKELIQN 610
+ E N ++ + K ED A ++ FS +VD RKE + N
Sbjct: 622 EAKEYFANMKRHRIQFKYSGPEDDAAISLAFSK---KQVDDRKEWLTN 666
Score = 80 (33.2 bits), Expect = 2.1e-23, Sum P(3) = 2.1e-23
Identities = 21/51 (41%), Positives = 31/51 (60%)
Query: 10 GLHHLVYEILDNAVDEAQAG-YASNIEVALLADNS-VSVADNGRGIPIDLH 58
GL+ + EIL NA D Q S I V + A+N+ +S+ +NG+GIP+ H
Sbjct: 79 GLYKIFDEILVNAADNKQRDPKMSCIRVTIDAENNLISIWNNGKGIPVVEH 129
Score = 52 (23.4 bits), Expect = 2.1e-23, Sum P(3) = 2.1e-23
Identities = 11/36 (30%), Positives = 22/36 (61%)
Query: 252 LGYANSIRTIDGGTHIEGVKASL-TRTLNSLGKKSK 286
+ + NSI T GG H++ V + ++ ++ + KK+K
Sbjct: 310 ISFVNSIATSKGGRHVDYVADQIVSKLVDVVKKKNK 345
>SGD|S000005032 [details] [associations]
symbol:TOP2 "Topoisomerase II, relieves torsional strain in
DNA by cleaving and re" species:4932 "Saccharomyces cerevisiae"
[GO:0044774 "mitotic DNA integrity checkpoint" evidence=IMP]
[GO:0016853 "isomerase activity" evidence=IEA] [GO:0003918 "DNA
topoisomerase type II (ATP-hydrolyzing) activity" evidence=IEA;IDA]
[GO:0006333 "chromatin assembly or disassembly" evidence=IMP]
[GO:0006265 "DNA topological change" evidence=IEA;IDA] [GO:0005634
"nucleus" evidence=IEA;IDA] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0006271 "DNA strand elongation involved in DNA
replication" evidence=IMP] [GO:0007131 "reciprocal meiotic
recombination" evidence=IMP] [GO:0000795 "synaptonemal complex"
evidence=IDA] [GO:0000019 "regulation of mitotic recombination"
evidence=IMP] [GO:0000819 "sister chromatid segregation"
evidence=IBA] [GO:0009330 "DNA topoisomerase complex
(ATP-hydrolyzing)" evidence=IBA] [GO:0008094 "DNA-dependent ATPase
activity" evidence=IBA] [GO:0000712 "resolution of meiotic
recombination intermediates" evidence=IBA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003916 "DNA topoisomerase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0005694 "chromosome" evidence=IEA] [GO:0006259
"DNA metabolic process" evidence=IEA] [GO:0031055 "chromatin
remodeling at centromere" evidence=IMP] [GO:0097046 "replication
fork progression beyond termination site" evidence=IMP] [GO:0097047
"DNA replication termination region" evidence=IPI]
InterPro:IPR001241 InterPro:IPR002205 InterPro:IPR003594
InterPro:IPR013506 InterPro:IPR013757 InterPro:IPR013758
InterPro:IPR013759 InterPro:IPR013760 InterPro:IPR018522
Pfam:PF00204 Pfam:PF00521 Pfam:PF02518 PRINTS:PR00418
PROSITE:PS00177 SMART:SM00387 SMART:SM00433 SMART:SM00434
SGD:S000005032 Pfam:PF01751 InterPro:IPR006171 GO:GO:0005739
GO:GO:0005524 EMBL:BK006947 GO:GO:0006333 Gene3D:3.30.565.10
SUPFAM:SSF55874 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 Gene3D:3.30.1360.40
InterPro:IPR024946 GO:GO:0000819 GO:GO:0009330 GO:GO:0070683
GO:GO:0006271 GO:GO:0000712 EMBL:X89016 GO:GO:0000795 EMBL:AF458969
EMBL:AF458971 EMBL:AF458972 GO:GO:0006265 GO:GO:0003918
Gene3D:3.90.199.10 SUPFAM:SSF56719 Gene3D:1.10.268.10
eggNOG:COG0187 Gene3D:3.40.50.670 PROSITE:PS50880 GO:GO:0031055
GO:GO:0000019 KO:K02952 GO:GO:0097046 RefSeq:NP_014311.3
GeneID:855636 KEGG:sce:YNL088W KO:K03164 RefSeq:NP_014318.3
GeneID:855643 KEGG:sce:YNL081C HOGENOM:HOG000216693
GeneTree:ENSGT00390000016222 OMA:AKEYFQD OrthoDB:EOG4XPTPZ
EMBL:M13814 EMBL:Z71364 PIR:S57534 PDB:1BGW PDB:1BJT PDB:1PVG
PDB:1QZR PDB:2RGR PDB:3L4J PDB:3L4K PDB:4GFH PDBsum:1BGW
PDBsum:1BJT PDBsum:1PVG PDBsum:1QZR PDBsum:2RGR PDBsum:3L4J
PDBsum:3L4K PDBsum:4GFH DisProt:DP00076 ProteinModelPortal:P06786
SMR:P06786 DIP:DIP-2300N IntAct:P06786 MINT:MINT-495862
STRING:P06786 PaxDb:P06786 PeptideAtlas:P06786 EnsemblFungi:YNL088W
CYGD:YNL088w ChEMBL:CHEMBL5290 EvolutionaryTrace:P06786
NextBio:979854 ArrayExpress:P06786 Genevestigator:P06786
GermOnline:YNL088W GO:GO:0097047 Uniprot:P06786
Length = 1428
Score = 304 (112.1 bits), Expect = 2.2e-23, P = 2.2e-23
Identities = 156/633 (24%), Positives = 261/633 (41%)
Query: 10 GLHHLVYEILDNAVD-EAQAGYASNIEVALLAD-NSVSVADNGRGIPIDLHPATNKSALE 67
GL + EIL NA D + + I+V + A+ +++ V ++G+GIPI++H N E
Sbjct: 59 GLFKIFDEILVNAADNKVRDPSMKRIDVNIHAEEHTIEVKNDGKGIPIEIHNKENIYIPE 118
Query: 68 TVLTVLHAXXXXXXXXXXXXXXXXXXXXXXXXXNALSES--LEVTVWRDGMEYHQKYSRG 125
+ H N S LE G +Y QK+
Sbjct: 119 MIFG--HLLTSSNYDDDEKKVTGGRNGYGAKLCNIFSTEFILETADLNVGQKYVQKWENN 176
Query: 126 KPVTTLTCHVLPVDS--KDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAF-LNPKL 182
+ CH + S K T++ F PD F + D N I G +R + +N +
Sbjct: 177 MSI----CHPPKITSYKKGPSYTKVTFKPDLTRFGMK-ELD-NDILGVMRRRVYDINGSV 230
Query: 183 T-IALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRK-DVDGITID-LA 239
I + + + Y +E Y++ L ++ + G K D+ I + +
Sbjct: 231 RDINVYLNGKSLKIRNFKNY-----VELYLKSLEKKRQLDNGEDGAAKSDIPTILYERIN 285
Query: 240 LQW-CSDAYSDT---MLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISL 295
+W + A SD + + NSI T GGTH+ + + + ++ + KK K K
Sbjct: 286 NRWEVAFAVSDISFQQISFVNSIATTMGGTHVNYITDQIVKKISEILKKKKKKSVKSFQ- 344
Query: 296 SGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQ-EYLTEYLE--LHPDV 352
++ + I+ + NP F QTK +L +V D + E EY+ + D+
Sbjct: 345 ----IKNNMFIFINCLIENPAFTSQTKEQL----TTRVKDFGSRCEIPLEYINKIMKTDL 396
Query: 353 XXXXXXXXXXXXXXXXXXXXXXXXVRQKSVLRSSSLPGKLADCSSTTPEES---EIFIVE 409
+KS R ++ P KL D + +E + + E
Sbjct: 397 ATRMFEIADANEENALKKSDGT----RKS--RITNYP-KLEDANKAGTKEGYKCTLVLTE 449
Query: 410 GDSA-----GGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLG-- 462
GDSA G A GRD + PLRGK+LNV + KN EIQ + + +GL
Sbjct: 450 GDSALSLAVAGLAVVGRD--YYGCYPLRGKMLNVREASADQILKNAEIQAIKKIMGLQHR 507
Query: 463 VKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFD-EGCIYVGVPPLYK 521
K ED K +LRY ++I+TD D DG+HI+ L++ F L D +G + + P+ K
Sbjct: 508 KKYEDTK--SLRYGHLMIMTDQDHDGSHIKGLIINFLESSFPGLLDIQGFLLEFITPIIK 565
Query: 522 VERGKQVQYC---YDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWE--TTLNPEQR 576
V K + Y+ + +K + + + +KGLG + ++ E + L+ +
Sbjct: 566 VSITKPTKNTIAFYNMPDYEKWREEESHKFTWKQKYYKGLGTSLAQEVREYFSNLDRHLK 625
Query: 577 MLKQLVIEDAAEANVVFSSLMGARVDTRKELIQ 609
+ L D ++ FS + D RKE ++
Sbjct: 626 IFHSLQGNDKDYIDLAFSK---KKADDRKEWLR 655
>UNIPROTKB|F1NZF0 [details] [associations]
symbol:TOP2A "DNA topoisomerase 2" species:9031 "Gallus
gallus" [GO:0005634 "nucleus" evidence=IEA] [GO:0005694
"chromosome" evidence=IEA] [GO:0006265 "DNA topological change"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003918
"DNA topoisomerase type II (ATP-hydrolyzing) activity"
evidence=IEA] InterPro:IPR001241 InterPro:IPR002205
InterPro:IPR003594 InterPro:IPR012542 InterPro:IPR013506
InterPro:IPR013757 InterPro:IPR013758 InterPro:IPR013759
InterPro:IPR013760 InterPro:IPR018522 Pfam:PF00204 Pfam:PF00521
Pfam:PF02518 Pfam:PF08070 PRINTS:PR00418 PROSITE:PS00177
SMART:SM00387 SMART:SM00433 SMART:SM00434 Pfam:PF01751
InterPro:IPR006171 GO:GO:0005524 GO:GO:0005634 GO:GO:0005694
Gene3D:3.30.565.10 SUPFAM:SSF55874 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211
Gene3D:3.30.1360.40 InterPro:IPR024946 GO:GO:0006265 GO:GO:0003918
Gene3D:3.90.199.10 SUPFAM:SSF56719 Gene3D:1.10.268.10
Gene3D:3.40.50.670 IPI:IPI00822514 GeneTree:ENSGT00390000016222
EMBL:AADN02068749 Ensembl:ENSGALT00000040062 Uniprot:F1NZF0
Length = 1553
Score = 244 (91.0 bits), Expect = 2.4e-23, Sum P(3) = 2.4e-23
Identities = 76/245 (31%), Positives = 121/245 (49%)
Query: 381 SVLRSSSLPG--KLADCSSTTPEES---EIFIVEGDSA-----GGSAKQGRDRRFQAILP 430
S ++ + + G KL D + + S + + EGDSA G GRD+ + P
Sbjct: 429 SAVKHTKIKGVPKLDDANDAGNKNSIDCTLILTEGDSAKTLAVSGLGVVGRDK--YGVFP 486
Query: 431 LRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKG--EDFKK-EALRYHKIIILTDADVD 487
LRGK+LNV + +N EI N+I+ +GL K ED + ++LRY KI+I+TD D D
Sbjct: 487 LRGKMLNVREASHKQIMENAEINNIIKIVGLQYKKNYEDRESLKSLRYGKIMIMTDQDQD 546
Query: 488 GAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSN 547
G+HI+ LL+ F + +L + + P+ KV + K+ Y E ++ KSS +
Sbjct: 547 GSHIKGLLINFIHHNWPSLLRHNFLEEFITPIIKVSKNKEEIPFYSIPEFEEWKSSTQNY 606
Query: 548 ALYSIQRFKGLGEMMPVQLWETTLNPEQRML--KQLVIEDAAEANVVFSSLMGARVDTRK 605
+ I+ +KGLG + E + + + K ED A + FS +V+ RK
Sbjct: 607 NSWKIKYYKGLGTSTSKEAKEYFADMARHRIGFKYSGPEDDAAITLAFSK---KKVEERK 663
Query: 606 ELIQN 610
E + N
Sbjct: 664 EWLTN 668
Score = 81 (33.6 bits), Expect = 2.4e-23, Sum P(3) = 2.4e-23
Identities = 19/75 (25%), Positives = 38/75 (50%)
Query: 252 LGYANSIRTIDGGTHIEGVKASL-TRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISV 310
+ + NSI T GG H++ V + T+ ++ + KK+K + + V+ + ++
Sbjct: 312 VSFVNSIATTKGGRHVDYVADQIVTKLIDVVKKKNKN----GVGVKPFQVKNHMWIFVNS 367
Query: 311 RVPNPEFEGQTKTRL 325
+ NP F+ QTK +
Sbjct: 368 LIENPTFDSQTKENM 382
Score = 79 (32.9 bits), Expect = 2.4e-23, Sum P(3) = 2.4e-23
Identities = 21/51 (41%), Positives = 32/51 (62%)
Query: 10 GLHHLVYEILDNAVDEAQAGYA-SNIEVALLADNS-VSVADNGRGIPIDLH 58
GL+ + EIL NA D Q + S I+V + +N+ +SV +NG+GIP+ H
Sbjct: 81 GLYKIFDEILVNAADNKQRDKSMSCIKVTIDPENNTISVWNNGKGIPVVEH 131
>WB|WBGene00010785 [details] [associations]
symbol:top-2 species:6239 "Caenorhabditis elegans"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003918 "DNA
topoisomerase type II (ATP-hydrolyzing) activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005694 "chromosome"
evidence=IEA] [GO:0006265 "DNA topological change" evidence=IEA]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0051301 "cell division" evidence=IMP] [GO:0000910
"cytokinesis" evidence=IMP] InterPro:IPR001241 InterPro:IPR002205
InterPro:IPR003594 InterPro:IPR013506 InterPro:IPR013757
InterPro:IPR013758 InterPro:IPR013759 InterPro:IPR013760
InterPro:IPR018522 Pfam:PF00204 Pfam:PF00521 Pfam:PF02518
PRINTS:PR00418 PROSITE:PS00177 SMART:SM00387 SMART:SM00433
SMART:SM00434 Pfam:PF01751 InterPro:IPR006171 GO:GO:0005524
GO:GO:0009792 GO:GO:0006261 GO:GO:0000910 Gene3D:3.30.565.10
SUPFAM:SSF55874 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 Gene3D:3.30.1360.40
InterPro:IPR024946 GO:GO:0000819 GO:GO:0006312 GO:GO:0070683
GO:GO:0000712 GO:GO:0000795 GO:GO:0006265 GO:GO:0003918
Gene3D:3.90.199.10 SUPFAM:SSF56719 Gene3D:1.10.268.10
eggNOG:COG0187 Gene3D:3.40.50.670 PROSITE:PS50880 KO:K03164
HOGENOM:HOG000216693 GeneTree:ENSGT00390000016222 EMBL:Z49069
EMBL:Z70213 PIR:T23620 RefSeq:NP_496536.1 ProteinModelPortal:Q23670
SMR:Q23670 DIP:DIP-27416N IntAct:Q23670 MINT:MINT-227249
STRING:Q23670 PaxDb:Q23670 EnsemblMetazoa:K12D12.1 GeneID:174825
KEGG:cel:CELE_K12D12.1 CTD:174825 WormBase:K12D12.1
InParanoid:Q23670 OMA:ADNKQND NextBio:885666 Uniprot:Q23670
Length = 1520
Score = 268 (99.4 bits), Expect = 8.5e-23, Sum P(2) = 8.5e-23
Identities = 113/489 (23%), Positives = 208/489 (42%)
Query: 138 VDSKDRQGTRIRFWPDKQVFTTAIQFDH--NTIAGRIRELAFLNPKLTIALRKEDSDPEK 195
V S D T+I F PD F D + +A R ++A + + + L + P K
Sbjct: 242 VKSTDEDFTKITFSPDLAKFKMKELDDDICHLMARRAYDVAGSSKGVAVFLNGKRI-PIK 300
Query: 196 NQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYA 255
+ +Y ++ Y N + +PL + + + D + LAL + + +
Sbjct: 301 G-FEDY-----VQMYTSQFNNEGEPLK--IAYEQVGDRWQVALALS--EKGFQQ--VSFV 348
Query: 256 NSIRTIDGGTHIEGVKASLT-RTLNSLGKK-SKTVKDKDISLSGEHVREGLTCIISVRVP 313
NSI T GG H++ V + + ++S+ +K +KT +++ ++ + ++ +
Sbjct: 349 NSIATTKGGRHVDYVADQMVAKFIDSIKRKLTKT----SMNIKPFQIKNHMWVFVNCLIE 404
Query: 314 NPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVXXXXXXXXXXXXXXXXXXXXX 373
NP F+ QTK + Q+ L
Sbjct: 405 NPTFDSQTKETM----------TLQQKQFGSTCVLSEKFSKAASSVGITDAVMSWVRFKQ 454
Query: 374 XXXVRQK-SVLRSSSLPG--KLADCSSTTPEESE---IFIVEGDSA-----GGSAKQGRD 422
+ +K S ++S L G KL D + + S+ + + EGDSA G + GRD
Sbjct: 455 MDDLNKKCSKTKTSKLKGIPKLEDANDAGTKNSQQCTLILTEGDSAKTLAVSGLSVVGRD 514
Query: 423 RRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKG-----EDFKKEALRYHK 477
+ + PLRGK+LNV + + N E+ +I+ LGL K +DFK LRY K
Sbjct: 515 K--YGVFPLRGKLLNVREGNMKQIADNAEVNAMIKILGLQYKKKYETEDDFK--TLRYGK 570
Query: 478 IIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAEL 537
++++ D D DG+HI+ L++ F + + +L + + P+ K +GK+ Y E
Sbjct: 571 LMVMADQDQDGSHIKGLVINFIHHFWPSLIQRNFVEEFITPIVKATKGKEEVSFYSLPEY 630
Query: 538 KKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLM 597
+ + + + Y I+ +KGLG + E L+ + ++ A + N V +
Sbjct: 631 SEWRMNTDNWKSYKIKYYKGLGTSTSKEAKEYFLDMVRHRIR-FKYNGADDDNAVDMAFS 689
Query: 598 GARVDTRKE 606
+++ RK+
Sbjct: 690 KKKIEERKD 698
Score = 83 (34.3 bits), Expect = 8.5e-23, Sum P(2) = 8.5e-23
Identities = 20/51 (39%), Positives = 30/51 (58%)
Query: 10 GLHHLVYEILDNAVDEAQAGYASN-IEVALLAD-NSVSVADNGRGIPIDLH 58
GL+ + EIL NA D Q N I++ + + N +SV +NG+GIP+ H
Sbjct: 115 GLYKIYDEILVNAADNKQRDPKMNTIKITINKEKNEISVYNNGKGIPVTQH 165
>UNIPROTKB|Q23670 [details] [associations]
symbol:K12D12.1 "Probable DNA topoisomerase 2" species:6239
"Caenorhabditis elegans" [GO:0009295 "nucleoid" evidence=IBA]
[GO:0007059 "chromosome segregation" evidence=IBA] [GO:0006312
"mitotic recombination" evidence=IBA] [GO:0006265 "DNA topological
change" evidence=IBA] [GO:0006261 "DNA-dependent DNA replication"
evidence=IBA] [GO:0003918 "DNA topoisomerase type II
(ATP-hydrolyzing) activity" evidence=IBA] [GO:0000819 "sister
chromatid segregation" evidence=IBA] [GO:0000795 "synaptonemal
complex" evidence=IBA] [GO:0000712 "resolution of meiotic
recombination intermediates" evidence=IBA] InterPro:IPR001241
InterPro:IPR002205 InterPro:IPR003594 InterPro:IPR013506
InterPro:IPR013757 InterPro:IPR013758 InterPro:IPR013759
InterPro:IPR013760 InterPro:IPR018522 Pfam:PF00204 Pfam:PF00521
Pfam:PF02518 PRINTS:PR00418 PROSITE:PS00177 SMART:SM00387
SMART:SM00433 SMART:SM00434 Pfam:PF01751 InterPro:IPR006171
GO:GO:0005524 GO:GO:0009792 GO:GO:0006261 GO:GO:0000910
Gene3D:3.30.565.10 SUPFAM:SSF55874 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211
Gene3D:3.30.1360.40 InterPro:IPR024946 GO:GO:0000819 GO:GO:0006312
GO:GO:0070683 GO:GO:0000712 GO:GO:0000795 GO:GO:0006265
GO:GO:0003918 Gene3D:3.90.199.10 SUPFAM:SSF56719 Gene3D:1.10.268.10
eggNOG:COG0187 Gene3D:3.40.50.670 PROSITE:PS50880 KO:K03164
HOGENOM:HOG000216693 GeneTree:ENSGT00390000016222 EMBL:Z49069
EMBL:Z70213 PIR:T23620 RefSeq:NP_496536.1 ProteinModelPortal:Q23670
SMR:Q23670 DIP:DIP-27416N IntAct:Q23670 MINT:MINT-227249
STRING:Q23670 PaxDb:Q23670 EnsemblMetazoa:K12D12.1 GeneID:174825
KEGG:cel:CELE_K12D12.1 CTD:174825 WormBase:K12D12.1
InParanoid:Q23670 OMA:ADNKQND NextBio:885666 Uniprot:Q23670
Length = 1520
Score = 268 (99.4 bits), Expect = 8.5e-23, Sum P(2) = 8.5e-23
Identities = 113/489 (23%), Positives = 208/489 (42%)
Query: 138 VDSKDRQGTRIRFWPDKQVFTTAIQFDH--NTIAGRIRELAFLNPKLTIALRKEDSDPEK 195
V S D T+I F PD F D + +A R ++A + + + L + P K
Sbjct: 242 VKSTDEDFTKITFSPDLAKFKMKELDDDICHLMARRAYDVAGSSKGVAVFLNGKRI-PIK 300
Query: 196 NQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYA 255
+ +Y ++ Y N + +PL + + + D + LAL + + +
Sbjct: 301 G-FEDY-----VQMYTSQFNNEGEPLK--IAYEQVGDRWQVALALS--EKGFQQ--VSFV 348
Query: 256 NSIRTIDGGTHIEGVKASLT-RTLNSLGKK-SKTVKDKDISLSGEHVREGLTCIISVRVP 313
NSI T GG H++ V + + ++S+ +K +KT +++ ++ + ++ +
Sbjct: 349 NSIATTKGGRHVDYVADQMVAKFIDSIKRKLTKT----SMNIKPFQIKNHMWVFVNCLIE 404
Query: 314 NPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVXXXXXXXXXXXXXXXXXXXXX 373
NP F+ QTK + Q+ L
Sbjct: 405 NPTFDSQTKETM----------TLQQKQFGSTCVLSEKFSKAASSVGITDAVMSWVRFKQ 454
Query: 374 XXXVRQK-SVLRSSSLPG--KLADCSSTTPEESE---IFIVEGDSA-----GGSAKQGRD 422
+ +K S ++S L G KL D + + S+ + + EGDSA G + GRD
Sbjct: 455 MDDLNKKCSKTKTSKLKGIPKLEDANDAGTKNSQQCTLILTEGDSAKTLAVSGLSVVGRD 514
Query: 423 RRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKG-----EDFKKEALRYHK 477
+ + PLRGK+LNV + + N E+ +I+ LGL K +DFK LRY K
Sbjct: 515 K--YGVFPLRGKLLNVREGNMKQIADNAEVNAMIKILGLQYKKKYETEDDFK--TLRYGK 570
Query: 478 IIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAEL 537
++++ D D DG+HI+ L++ F + + +L + + P+ K +GK+ Y E
Sbjct: 571 LMVMADQDQDGSHIKGLVINFIHHFWPSLIQRNFVEEFITPIVKATKGKEEVSFYSLPEY 630
Query: 538 KKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLM 597
+ + + + Y I+ +KGLG + E L+ + ++ A + N V +
Sbjct: 631 SEWRMNTDNWKSYKIKYYKGLGTSTSKEAKEYFLDMVRHRIR-FKYNGADDDNAVDMAFS 689
Query: 598 GARVDTRKE 606
+++ RK+
Sbjct: 690 KKKIEERKD 698
Score = 83 (34.3 bits), Expect = 8.5e-23, Sum P(2) = 8.5e-23
Identities = 20/51 (39%), Positives = 30/51 (58%)
Query: 10 GLHHLVYEILDNAVDEAQAGYASN-IEVALLAD-NSVSVADNGRGIPIDLH 58
GL+ + EIL NA D Q N I++ + + N +SV +NG+GIP+ H
Sbjct: 115 GLYKIYDEILVNAADNKQRDPKMNTIKITINKEKNEISVYNNGKGIPVTQH 165
>FB|FBgn0003732 [details] [associations]
symbol:Top2 "Topoisomerase 2" species:7227 "Drosophila
melanogaster" [GO:0006265 "DNA topological change" evidence=IDA]
[GO:0005634 "nucleus" evidence=NAS;IDA] [GO:0003918 "DNA
topoisomerase type II (ATP-hydrolyzing) activity" evidence=NAS;IDA]
[GO:0000400 "four-way junction DNA binding" evidence=IDA]
[GO:0016590 "ACF complex" evidence=IDA] [GO:0008623 "CHRAC"
evidence=IDA] [GO:0007067 "mitosis" evidence=IMP;TAS] [GO:0007126
"meiosis" evidence=TAS] [GO:0003729 "mRNA binding" evidence=IDA]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0005694 "chromosome"
evidence=IDA] [GO:0051310 "metaphase plate congression"
evidence=IDA] [GO:0000819 "sister chromatid segregation"
evidence=IDA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000182
"rDNA binding" evidence=IDA] [GO:0003696 "satellite DNA binding"
evidence=IDA] [GO:0006342 "chromatin silencing" evidence=IDA]
[GO:0007076 "mitotic chromosome condensation" evidence=IMP]
[GO:0007052 "mitotic spindle organization" evidence=IMP]
[GO:0007095 "mitotic G2 DNA damage checkpoint" evidence=IGI]
[GO:0009295 "nucleoid" evidence=IBA] [GO:0006261 "DNA-dependent DNA
replication" evidence=IBA] [GO:0044774 "mitotic DNA integrity
checkpoint" evidence=IBA] [GO:0000712 "resolution of meiotic
recombination intermediates" evidence=IBA] [GO:0006312 "mitotic
recombination" evidence=IBA] [GO:0000795 "synaptonemal complex"
evidence=IBA] InterPro:IPR001241 InterPro:IPR002205
InterPro:IPR003594 InterPro:IPR013506 InterPro:IPR013757
InterPro:IPR013758 InterPro:IPR013759 InterPro:IPR013760
InterPro:IPR018522 Pfam:PF00204 Pfam:PF00521 Pfam:PF02518
PRINTS:PR00418 PROSITE:PS00177 SMART:SM00387 SMART:SM00433
SMART:SM00434 Pfam:PF01751 InterPro:IPR006171 GO:GO:0005524
GO:GO:0007095 GO:GO:0007052 EMBL:AE014134 GO:GO:0003729
GO:GO:0006261 GO:GO:0006342 Gene3D:3.30.565.10 SUPFAM:SSF55874
GO:GO:0007076 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 Gene3D:3.30.1360.40
InterPro:IPR024946 GO:GO:0006312 GO:GO:0008623 GO:GO:0070683
GO:GO:0000712 GO:GO:0003696 GO:GO:0051310 GO:GO:0000182
GO:GO:0000795 GO:GO:0006265 GO:GO:0003918 Gene3D:3.90.199.10
SUPFAM:SSF56719 Gene3D:1.10.268.10 eggNOG:COG0187
Gene3D:3.40.50.670 PROSITE:PS50880 GO:GO:0000400 KO:K03164
GeneTree:ENSGT00390000016222 ChiTaRS:TOP2A OMA:AKEYFQD EMBL:X61209
PIR:S02160 RefSeq:NP_476760.1 UniGene:Dm.22886
ProteinModelPortal:P15348 SMR:P15348 STRING:P15348 PaxDb:P15348
PRIDE:P15348 EnsemblMetazoa:FBtr0081287 EnsemblMetazoa:FBtr0332320
GeneID:35225 KEGG:dme:Dmel_CG10223 CTD:35225 FlyBase:FBgn0003732
InParanoid:P15348 OrthoDB:EOG4HQC04 PhylomeDB:P15348
BindingDB:P15348 ChEMBL:CHEMBL2671 GenomeRNAi:35225 NextBio:792468
Bgee:P15348 GermOnline:CG10223 Uniprot:P15348
Length = 1447
Score = 212 (79.7 bits), Expect = 3.2e-22, Sum P(2) = 3.2e-22
Identities = 58/187 (31%), Positives = 94/187 (50%)
Query: 384 RSSSLPG--KLADCSSTTPEES---EIFIVEGDSAGGSAKQGRD---RRFQAILPLRGKI 435
+SS + G KL D + + S + + EGDSA A G R + PLRGK+
Sbjct: 411 KSSKIKGIPKLEDANEAGGKNSIKCTLILTEGDSAKSLAVSGLGVIGRDLYGVFPLRGKL 470
Query: 436 LNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKE---ALRYHKIIILTDADVDGAHIR 492
LNV + + +N EI NL + +GL K + ++ LRY K++I+TD D DG+HI+
Sbjct: 471 LNVREANFKQLSENAEINNLCKIIGLQYKKKYLTEDDLKTLRYGKVMIMTDQDQDGSHIK 530
Query: 493 TLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSI 552
LL+ F + L + + P+ K + + Y E ++ K+ ++ Y+I
Sbjct: 531 GLLINFIHTNWPELLRLPFLEEFITPIVKATKKNEELSFYSLPEFEEWKNDTANHHTYNI 590
Query: 553 QRFKGLG 559
+ +KGLG
Sbjct: 591 KYYKGLG 597
Score = 136 (52.9 bits), Expect = 3.2e-22, Sum P(2) = 3.2e-22
Identities = 84/332 (25%), Positives = 137/332 (41%)
Query: 10 GLHHLVYEILDNAVDEAQAGYASN-IEVALLAD-NSVSVADNGRGIPIDLHPATNKSALE 67
GL+ + EIL NA D Q + N I++ + + N VSV +NG+GIP+ +H K +
Sbjct: 61 GLYKIFDEILVNAADNKQRDKSMNTIKIDIDPERNMVSVWNNGQGIPVTMHKE-QKMYVP 119
Query: 68 TVLTVLHAXXXXXXXXXXXXXXXXXXXXXXXXXNALSESLEV-TVWRDGMEYHQKYSR-- 124
T++ H N S S V T R EY + + +
Sbjct: 120 TMIFG-HLLTSSNYNDDEKKVTGGRNGYGAKLCNIFSTSFTVETATR---EYKKSFKQTW 175
Query: 125 GKPVTTLTCHVLPVDSKDRQGT---RIRFWPDKQVFTTAIQFDHNTIA---GRIRELAFL 178
G + + V KD GT RI F PD F + D + +A R ++A
Sbjct: 176 GNNMGKAS----DVQIKDFNGTDYTRITFSPDLAKFKMD-RLDEDIVALMSRRAYDVAAS 230
Query: 179 NPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKP----LHDVVGFRKDVDGI 234
+ +++ L +N + +Y ++ +++ + D P +H+V R +V
Sbjct: 231 SKGVSVFLNGNKLGV-RN-FKDY-----IDLHIKNTDDDSGPPIKIVHEVANERWEVACC 283
Query: 235 TIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTL-NSLGKKSKTVKDKDI 293
D Q S + NSI T GG H++ V +L + L L KK+K I
Sbjct: 284 PSDRGFQQVS---------FVNSIATYKGGRHVDHVVDNLIKQLLEVLKKKNKG----GI 330
Query: 294 SLSGEHVREGLTCIISVRVPNPEFEGQTKTRL 325
++ VR L ++ + NP F+ QTK +
Sbjct: 331 NIKPFQVRNHLWVFVNCLIENPTFDSQTKENM 362
Score = 47 (21.6 bits), Expect = 8.4e-05, Sum P(2) = 8.4e-05
Identities = 11/46 (23%), Positives = 20/46 (43%)
Query: 535 AELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQ 580
++ KK K P A + K ++ + +W T + +LKQ
Sbjct: 1100 SKAKKEKEVDPEKAFKKLTDVKKFDYLLGMSMWMLTEEKKNELLKQ 1145
Score = 41 (19.5 bits), Expect = 0.00034, Sum P(2) = 0.00034
Identities = 7/35 (20%), Positives = 20/35 (57%)
Query: 409 EGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDE 443
E +S+GG+ K+ ++ +A++ + ++ D+
Sbjct: 1406 EDESSGGAKKKAPPKKRRAVIESDDDDIEIDEDDD 1440
>TAIR|locus:2076201 [details] [associations]
symbol:TOPII "AT3G23890" species:3702 "Arabidopsis
thaliana" [GO:0000712 "resolution of meiotic recombination
intermediates" evidence=IBA] [GO:0000795 "synaptonemal complex"
evidence=IBA] [GO:0000819 "sister chromatid segregation"
evidence=IBA] [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0003918 "DNA topoisomerase type II (ATP-hydrolyzing) activity"
evidence=IEA;ISS;IBA] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0005694 "chromosome"
evidence=IEA] [GO:0006200 "ATP catabolic process" evidence=IBA]
[GO:0006259 "DNA metabolic process" evidence=IEA;ISS] [GO:0006261
"DNA-dependent DNA replication" evidence=IBA] [GO:0006265 "DNA
topological change" evidence=IEA;ISS;IBA] [GO:0006312 "mitotic
recombination" evidence=IBA] [GO:0007059 "chromosome segregation"
evidence=ISS] [GO:0008094 "DNA-dependent ATPase activity"
evidence=ISS;IBA] [GO:0009330 "DNA topoisomerase complex
(ATP-hydrolyzing)" evidence=ISS;IBA] [GO:0009507 "chloroplast"
evidence=ISM] [GO:0044774 "mitotic DNA integrity checkpoint"
evidence=IBA] [GO:0003916 "DNA topoisomerase activity"
evidence=ISS] [GO:0000226 "microtubule cytoskeleton organization"
evidence=RCA] [GO:0000911 "cytokinesis by cell plate formation"
evidence=RCA] [GO:0006260 "DNA replication" evidence=RCA]
[GO:0006270 "DNA replication initiation" evidence=RCA] [GO:0006275
"regulation of DNA replication" evidence=RCA] [GO:0006306 "DNA
methylation" evidence=RCA] [GO:0006342 "chromatin silencing"
evidence=RCA] [GO:0008283 "cell proliferation" evidence=RCA]
[GO:0009909 "regulation of flower development" evidence=RCA]
[GO:0009957 "epidermal cell fate specification" evidence=RCA]
[GO:0010583 "response to cyclopentenone" evidence=RCA] [GO:0016458
"gene silencing" evidence=RCA] [GO:0016572 "histone
phosphorylation" evidence=RCA] [GO:0034968 "histone lysine
methylation" evidence=RCA] [GO:0051225 "spindle assembly"
evidence=RCA] [GO:0051567 "histone H3-K9 methylation" evidence=RCA]
[GO:0051726 "regulation of cell cycle" evidence=RCA]
InterPro:IPR001241 InterPro:IPR002205 InterPro:IPR003594
InterPro:IPR013506 InterPro:IPR013757 InterPro:IPR013758
InterPro:IPR013759 InterPro:IPR013760 InterPro:IPR018522
Pfam:PF00204 Pfam:PF00521 PRINTS:PR00418 PROSITE:PS00177
SMART:SM00387 SMART:SM00433 SMART:SM00434 Pfam:PF01751
InterPro:IPR006171 GO:GO:0005524 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0006261 Gene3D:3.30.565.10
SUPFAM:SSF55874 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 Gene3D:3.30.1360.40
InterPro:IPR024946 GO:GO:0000819 GO:GO:0006312 EMBL:AP001297
GO:GO:0009330 GO:GO:0070683 GO:GO:0000712 GO:GO:0000795
GO:GO:0006265 GO:GO:0003918 Gene3D:3.90.199.10 SUPFAM:SSF56719
Gene3D:1.10.268.10 eggNOG:COG0187 Gene3D:3.40.50.670
PROSITE:PS50880 KO:K03164 HOGENOM:HOG000216693 OMA:AKEYFQD
EMBL:L21015 EMBL:U12284 EMBL:U12285 EMBL:M84654 IPI:IPI00527804
PIR:S53598 RefSeq:NP_189031.1 UniGene:At.22343
ProteinModelPortal:P30182 SMR:P30182 STRING:P30182 PaxDb:P30182
PRIDE:P30182 EnsemblPlants:AT3G23890.1 GeneID:821972
KEGG:ath:AT3G23890 GeneFarm:2656 TAIR:At3g23890 InParanoid:P30182
PhylomeDB:P30182 ProtClustDB:PLN03237 Genevestigator:P30182
GermOnline:AT3G23890 Uniprot:P30182
Length = 1473
Score = 289 (106.8 bits), Expect = 1.0e-21, P = 1.0e-21
Identities = 102/381 (26%), Positives = 168/381 (44%)
Query: 252 LGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVR 311
+ + NSI TI GGTH++ V + +T + + K K+K+ ++ +V+ L ++
Sbjct: 314 VSFVNSIATIKGGTHVDYVTSQITNHIVAAVNK----KNKNANVKAHNVKNHLWVFVNAL 369
Query: 312 VPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVXXXXXXXXXXXXXXXXXXX 371
+ NP F+ QTK L +R Q EL D
Sbjct: 370 IDNPAFDSQTKETL---TLR-------QSSFGSKCELSEDFLKKVGKSGVVENLLSWADF 419
Query: 372 XXXXXVRQKSVLRSSS-LPGKLADCSSTTPEESEI---FIVEGDSAGGSAKQGRD---RR 424
+++ ++ L KL D + + S + + EGDSA A GR
Sbjct: 420 KQNKDLKKSDGAKTGRVLVEKLDDAAEAGGKNSRLCTLILTEGDSAKSLALAGRSVLGNN 479
Query: 425 FQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDA 484
+ + PLRGK+LNV + N+EI+NL + LGL + +LRY +++I+TD
Sbjct: 480 YCGVFPLRGKLLNVREASTTQITNNKEIENLKKILGLKQNMKYENVNSLRYGQMMIMTDQ 539
Query: 485 DVDGAHIRTLLLTFFYRYQKTLFDEGCIYVG-VPPLYKVER-G-KQVQYCYDDAELKKVK 541
D DG+HI+ LL+ F + + +L V + P+ K R G K+V Y E ++ K
Sbjct: 540 DHDGSHIKGLLINFIHSFWPSLLQVPSFLVEFITPIVKATRKGTKKVLSFYSMPEYEEWK 599
Query: 542 SSFPSNAL-YSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGAR 600
S NA + I+ +KGLG + E N K V ED + + + +
Sbjct: 600 ESLKGNATGWDIKYYKGLGTSTAEEGKEYFSNLGLHK-KDFVWEDEQDGEAIELAFSKKK 658
Query: 601 VDTRKELIQNAANLVNLDHLD 621
++ RK + ++ V +HLD
Sbjct: 659 IEARKNWL---SSYVPGNHLD 676
Score = 149 (57.5 bits), Expect = 3.9e-05, Sum P(2) = 3.9e-05
Identities = 76/331 (22%), Positives = 136/331 (41%)
Query: 10 GLHHLVYEILDNAVDEAQA-GYASNIEVAL-LADNSVSVADNGRGIPIDLHPATNKSALE 67
GL+ + EIL NA D Q +++V + + N +SV ++G G+P+++H E
Sbjct: 80 GLYKIFDEILVNAADNKQRDAKMDSVQVVIDVEQNLISVCNSGAGVPVEIHQEEGIYVPE 139
Query: 68 TVLTVLHAXXXXXXXXXXXXXXXXXXXXXXXXXNALSESLEVTVWRDGM---EYHQKYSR 124
+ H N S + DG +Y Q +
Sbjct: 140 MIFG--HLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIET-ADGKRLKKYKQVFEN 196
Query: 125 --GK---PVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFT-TAIQFDHNTIAG-RIRELA- 176
GK PV T C+ K T++ F PD + F T ++ D + R+ ++A
Sbjct: 197 NMGKKSEPVIT-KCN------KSENWTKVTFKPDLKKFNMTELEDDVVALMSKRVFDIAG 249
Query: 177 FLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKK--PLHDVVGFRKDVDGI 234
L + + L + P K+ + +Y ++ Y+ N + PL + D +
Sbjct: 250 CLGKSVKVELNGKQI-PVKS-FTDY-----VDLYLSAANKSRTEDPLPRLTEKVNDRWEV 302
Query: 235 TIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDIS 294
+ L S+ + + NSI TI GGTH++ V + +T + + K K+K+ +
Sbjct: 303 CVSL-----SEGQFQ-QVSFVNSIATIKGGTHVDYVTSQITNHIVAAVNK----KNKNAN 352
Query: 295 LSGEHVREGLTCIISVRVPNPEFEGQTKTRL 325
+ +V+ L ++ + NP F+ QTK L
Sbjct: 353 VKAHNVKNHLWVFVNALIDNPAFDSQTKETL 383
Score = 37 (18.1 bits), Expect = 3.9e-05, Sum P(2) = 3.9e-05
Identities = 8/24 (33%), Positives = 14/24 (58%)
Query: 563 PVQLWETTLNPEQRMLKQLVIEDA 586
P LW + L + L++L ++DA
Sbjct: 1155 PKSLWLSDLESLDKELEKLDLKDA 1178
>UNIPROTKB|F1P2F2 [details] [associations]
symbol:TOP2A "DNA topoisomerase 2" species:9031 "Gallus
gallus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0003918 "DNA
topoisomerase type II (ATP-hydrolyzing) activity" evidence=IEA]
[GO:0040016 "embryonic cleavage" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] [GO:0042826 "histone
deacetylase binding" evidence=IEA] [GO:0043065 "positive regulation
of apoptotic process" evidence=IEA] [GO:0043130 "ubiquitin binding"
evidence=IEA] [GO:0045870 "positive regulation of retroviral genome
replication" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
[GO:0000228 "nuclear chromosome" evidence=IEA] [GO:0000793
"condensed chromosome" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IEA] [GO:0005080 "protein kinase C binding"
evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0005814 "centriole" evidence=IEA]
[GO:0006265 "DNA topological change" evidence=IEA] [GO:0006266 "DNA
ligation" evidence=IEA] [GO:0006974 "response to DNA damage
stimulus" evidence=IEA] [GO:0007059 "chromosome segregation"
evidence=IEA] [GO:0008022 "protein C-terminus binding"
evidence=IEA] [GO:0008144 "drug binding" evidence=IEA] [GO:0009330
"DNA topoisomerase complex (ATP-hydrolyzing)" evidence=IEA]
[GO:0030263 "apoptotic chromosome condensation" evidence=IEA]
InterPro:IPR001241 InterPro:IPR002205 InterPro:IPR003594
InterPro:IPR012542 InterPro:IPR013506 InterPro:IPR013757
InterPro:IPR013758 InterPro:IPR013759 InterPro:IPR013760
InterPro:IPR018522 Pfam:PF00204 Pfam:PF00521 Pfam:PF02518
Pfam:PF08070 PRINTS:PR00418 PROSITE:PS00177 SMART:SM00387
SMART:SM00433 SMART:SM00434 Pfam:PF01751 InterPro:IPR006171
GO:GO:0005524 GO:GO:0007059 GO:GO:0005654 GO:GO:0005730
GO:GO:0005814 GO:GO:0008144 GO:GO:0045944 GO:GO:0003682
GO:GO:0006974 GO:GO:0043065 GO:GO:0030263 Gene3D:3.30.565.10
SUPFAM:SSF55874 GO:GO:0000793 GO:GO:0006266 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211
Gene3D:3.30.1360.40 InterPro:IPR024946 GO:GO:0000228 GO:GO:0009330
GO:GO:0006265 GO:GO:0003918 Gene3D:3.90.199.10 SUPFAM:SSF56719
Gene3D:1.10.268.10 Gene3D:3.40.50.670 GO:GO:0045870
GeneTree:ENSGT00390000016222 EMBL:AADN02068749 IPI:IPI00571557
Ensembl:ENSGALT00000006249 Uniprot:F1P2F2
Length = 1586
Score = 244 (91.0 bits), Expect = 2.9e-21, Sum P(3) = 2.9e-21
Identities = 76/245 (31%), Positives = 121/245 (49%)
Query: 381 SVLRSSSLPG--KLADCSSTTPEES---EIFIVEGDSA-----GGSAKQGRDRRFQAILP 430
S ++ + + G KL D + + S + + EGDSA G GRD+ + P
Sbjct: 450 SAVKHTKIKGVPKLDDANDAGNKNSIDCTLILTEGDSAKTLAVSGLGVVGRDK--YGVFP 507
Query: 431 LRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKG--EDFKK-EALRYHKIIILTDADVD 487
LRGK+LNV + +N EI N+I+ +GL K ED + ++LRY KI+I+TD D D
Sbjct: 508 LRGKMLNVREASHKQIMENAEINNIIKIVGLQYKKNYEDRESLKSLRYGKIMIMTDQDQD 567
Query: 488 GAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSN 547
G+HI+ LL+ F + +L + + P+ KV + K+ Y E ++ KSS +
Sbjct: 568 GSHIKGLLINFIHHNWPSLLRHNFLEEFITPIIKVSKNKEEIPFYSIPEFEEWKSSTQNY 627
Query: 548 ALYSIQRFKGLGEMMPVQLWETTLNPEQRML--KQLVIEDAAEANVVFSSLMGARVDTRK 605
+ I+ +KGLG + E + + + K ED A + FS +V+ RK
Sbjct: 628 NSWKIKYYKGLGTSTSKEAKEYFADMARHRIGFKYSGPEDDAAITLAFSK---KKVEERK 684
Query: 606 ELIQN 610
E + N
Sbjct: 685 EWLTN 689
Score = 79 (32.9 bits), Expect = 2.9e-21, Sum P(3) = 2.9e-21
Identities = 21/51 (41%), Positives = 32/51 (62%)
Query: 10 GLHHLVYEILDNAVDEAQAGYA-SNIEVALLADNS-VSVADNGRGIPIDLH 58
GL+ + EIL NA D Q + S I+V + +N+ +SV +NG+GIP+ H
Sbjct: 77 GLYKIFDEILVNAADNKQRDKSMSCIKVTIDPENNTISVWNNGKGIPVVEH 127
Score = 61 (26.5 bits), Expect = 2.9e-21, Sum P(3) = 2.9e-21
Identities = 15/64 (23%), Positives = 32/64 (50%)
Query: 263 GGTHIEGVKASL-TRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQT 321
GG H++ V + T+ ++ + KK+K + + V+ + ++ + NP F+ QT
Sbjct: 344 GGRHVDYVADQIVTKLIDVVKKKNKN----GVGVKPFQVKNHMWIFVNSLIENPTFDSQT 399
Query: 322 KTRL 325
K +
Sbjct: 400 KENM 403
>UNIPROTKB|Q7S9W8 [details] [associations]
symbol:NCU06338 "DNA topoisomerase 2" species:367110
"Neurospora crassa OR74A" [GO:0000712 "resolution of meiotic
recombination intermediates" evidence=IBA] [GO:0000795
"synaptonemal complex" evidence=IBA] [GO:0000819 "sister chromatid
segregation" evidence=IBA] [GO:0003918 "DNA topoisomerase type II
(ATP-hydrolyzing) activity" evidence=IBA] [GO:0006261
"DNA-dependent DNA replication" evidence=IBA] [GO:0006265 "DNA
topological change" evidence=IBA] [GO:0006312 "mitotic
recombination" evidence=IBA] [GO:0007059 "chromosome segregation"
evidence=IBA] [GO:0009295 "nucleoid" evidence=IBA]
InterPro:IPR001241 InterPro:IPR002205 InterPro:IPR003594
InterPro:IPR013506 InterPro:IPR013757 InterPro:IPR013758
InterPro:IPR013759 InterPro:IPR013760 InterPro:IPR017956
InterPro:IPR018522 Pfam:PF00204 Pfam:PF00521 Pfam:PF02518
PRINTS:PR00418 PROSITE:PS00177 SMART:SM00384 SMART:SM00387
SMART:SM00433 SMART:SM00434 Pfam:PF01751 InterPro:IPR006171
GO:GO:0005524 GO:GO:0006261 Gene3D:3.30.565.10 SUPFAM:SSF55874
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 Gene3D:3.30.1360.40 InterPro:IPR024946
GO:GO:0000819 GO:GO:0006312 GO:GO:0070683 GO:GO:0000712
GO:GO:0000795 GO:GO:0006265 GO:GO:0003918 Gene3D:3.90.199.10
SUPFAM:SSF56719 Gene3D:1.10.268.10 eggNOG:COG0187
Gene3D:3.40.50.670 KO:K03164 HOGENOM:HOG000216693 OrthoDB:EOG4XPTPZ
EMBL:AABX02000026 RefSeq:XP_962372.2 UniGene:Ncr.23351
ProteinModelPortal:Q7S9W8 SMR:Q7S9W8 STRING:Q7S9W8
EnsemblFungi:EFNCRT00000006113 GeneID:3878536 KEGG:ncr:NCU06338
OMA:FFTLPQY Uniprot:Q7S9W8
Length = 1909
Score = 207 (77.9 bits), Expect = 1.1e-19, Sum P(3) = 1.1e-19
Identities = 71/235 (30%), Positives = 112/235 (47%)
Query: 401 EESEIFIVEGDSAGGSAKQGR---DRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIR 457
+E + + EGDSA G A GR D + PLRGK+LNV + KN+E++N+ +
Sbjct: 546 QECTLILTEGDSARGLAVAGRAILDPNRIGVFPLRGKMLNVRDASADQILKNKEVENIKK 605
Query: 458 ALGL--GVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFY-RYQKTLFDEGCIYV 514
LGL G D K LRY ++I+ D D+DG+HI+ LL+ FF ++ L
Sbjct: 606 FLGLKHGKVYTDTKD--LRYGHLMIMADQDLDGSHIKGLLINFFECQFPSLLRIPNFFQE 663
Query: 515 GVPPLYKVERG------KQVQYCYDDAELKKVKSSFPSNAL--YSIQRFKGLGEMMP--V 564
+ P+ KV +G +++Q + + ++ K + N L + + KGLG
Sbjct: 664 FITPVVKVWQGPNPKKPQRLQGFFTLPQYEEWKEAH-RNELRRWKYKYLKGLGSSTTDDA 722
Query: 565 QLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLDH 619
QL+ T LN + + E++ + FS + D RKE + LDH
Sbjct: 723 QLYFTNLNKHLKEFDVMTREESEMFELAFSK---KKADARKEWLAKCEPGTYLDH 774
Score = 85 (35.0 bits), Expect = 1.1e-19, Sum P(3) = 1.1e-19
Identities = 20/56 (35%), Positives = 35/56 (62%)
Query: 10 GLHHLVYEILDNAVDEAQAGYASN-IEVALLADNS-VSVADNGRGIPIDLHPATNK 63
GL+ + EIL NA D +Q + ++V + ++ +SV +NG+GIP+++H T K
Sbjct: 178 GLYKIFDEILVNAADNSQRDSSMTFLKVTINRESGEISVENNGKGIPVEIH-GTEK 232
Score = 82 (33.9 bits), Expect = 1.1e-19, Sum P(3) = 1.1e-19
Identities = 25/83 (30%), Positives = 37/83 (44%)
Query: 244 SDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTL-NSLGKKSKTVKDKDISLSGEHVRE 302
SD S + + N+I T GG+H+ + + L L KK K K L +V+
Sbjct: 399 SDG-SFQQVSFVNNIATTSGGSHVNYIADQIIEVLMKELQKK----KGKGHGLKTANVKN 453
Query: 303 GLTCIISVRVPNPEFEGQTKTRL 325
I+ + NP F QTK +L
Sbjct: 454 QFFIFINCLIDNPAFSSQTKEQL 476
Score = 37 (18.1 bits), Expect = 4.6e-15, Sum P(3) = 4.6e-15
Identities = 8/26 (30%), Positives = 15/26 (57%)
Query: 171 RIRELAFLNPKLTIALRKEDSDPEKN 196
++R+ ++ L+ A +K D D KN
Sbjct: 496 KVRQSEAIDNLLSFADKKRDKDLAKN 521
>ZFIN|ZDB-GENE-030131-2453 [details] [associations]
symbol:top2a "topoisomerase (DNA) II alpha"
species:7955 "Danio rerio" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003918 "DNA topoisomerase type II (ATP-hydrolyzing) activity"
evidence=IEA;ISS;IBA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005694 "chromosome" evidence=IEA] [GO:0006259 "DNA metabolic
process" evidence=IEA] [GO:0006265 "DNA topological change"
evidence=IEA;ISS;IBA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0007059 "chromosome segregation" evidence=ISS;IMP] [GO:0009330
"DNA topoisomerase complex (ATP-hydrolyzing)" evidence=ISS]
[GO:0008094 "DNA-dependent ATPase activity" evidence=ISS]
[GO:0030261 "chromosome condensation" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0006200 "ATP catabolic process"
evidence=IBA] [GO:0000712 "resolution of meiotic recombination
intermediates" evidence=IBA] [GO:0000795 "synaptonemal complex"
evidence=IBA] [GO:0000819 "sister chromatid segregation"
evidence=IBA] [GO:0006312 "mitotic recombination" evidence=IBA]
[GO:0006261 "DNA-dependent DNA replication" evidence=IBA]
[GO:0009295 "nucleoid" evidence=IBA] [GO:0031100 "organ
regeneration" evidence=IMP] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016853 "isomerase activity" evidence=IEA]
[GO:0003916 "DNA topoisomerase activity" evidence=IEA]
InterPro:IPR001241 InterPro:IPR002205 InterPro:IPR003594
InterPro:IPR013506 InterPro:IPR013757 InterPro:IPR013758
InterPro:IPR013759 InterPro:IPR013760 InterPro:IPR018522
Pfam:PF00204 Pfam:PF00521 Pfam:PF02518 PRINTS:PR00418
PROSITE:PS00177 SMART:SM00387 SMART:SM00433 SMART:SM00434
Pfam:PF01751 InterPro:IPR006171 ZFIN:ZDB-GENE-030131-2453
GO:GO:0005524 GO:GO:0031100 GO:GO:0006261 Gene3D:3.30.565.10
SUPFAM:SSF55874 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 Gene3D:3.30.1360.40
InterPro:IPR024946 GO:GO:0000819 GO:GO:0006312 GO:GO:0070683
GO:GO:0000712 GO:GO:0000795 GO:GO:0006265 GO:GO:0003918
Gene3D:3.90.199.10 SUPFAM:SSF56719 Gene3D:1.10.268.10
Gene3D:3.40.50.670 KO:K03164 CTD:7153 HOVERGEN:HBG052998
EMBL:AY648832 IPI:IPI00488403 RefSeq:NP_001003834.1
UniGene:Dr.119089 UniGene:Dr.31760 ProteinModelPortal:Q6DRC7
SMR:Q6DRC7 STRING:Q6DRC7 GeneID:323733 KEGG:dre:323733
NextBio:20808410 Uniprot:Q6DRC7
Length = 1574
Score = 221 (82.9 bits), Expect = 1.9e-19, Sum P(3) = 1.9e-19
Identities = 62/192 (32%), Positives = 94/192 (48%)
Query: 381 SVLRSSSLPG--KLADCSSTTPEESE---IFIVEGDSA-----GGSAKQGRDRRFQAILP 430
S ++ + + G KL D + + S + + EGDSA G GRDR + P
Sbjct: 427 SAVKHTKIKGVPKLDDANDAGGKNSNSCTLILTEGDSAKTLAVSGLGVVGRDR--YGVFP 484
Query: 431 LRGKILNVERKDEAAMYKNEEIQNLIRALGLGVK---GEDFKKEALRYHKIIILTDADVD 487
LRGK+LNV + +N EI N+I+ LGL K + ++LRY K++I+TD D D
Sbjct: 485 LRGKMLNVREASHKQIMENAEINNIIKILGLQYKKNYSDPESLKSLRYGKLMIMTDQDQD 544
Query: 488 GAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSN 547
G+HI+ LL+ F + +L + + P+ K KQ Y E + K S
Sbjct: 545 GSHIKGLLINFIHHNWPSLLRHNFLEEFITPIIKASNKKQEISFYSIPEFTEWKEKQSSI 604
Query: 548 ALYSIQRFKGLG 559
+ I+ +KGLG
Sbjct: 605 KSWKIKYYKGLG 616
Score = 80 (33.2 bits), Expect = 1.9e-19, Sum P(3) = 1.9e-19
Identities = 21/51 (41%), Positives = 31/51 (60%)
Query: 10 GLHHLVYEILDNAVDEAQAGYASN-IEVALLADNS-VSVADNGRGIPIDLH 58
GL+ + EIL NA D Q N I+V + +N+ +SV +NG+GIP+ H
Sbjct: 79 GLYKIFDEILVNAADNKQRDKTMNCIKVNIDPENNTISVWNNGKGIPVVEH 129
Score = 67 (28.6 bits), Expect = 1.9e-19, Sum P(3) = 1.9e-19
Identities = 19/75 (25%), Positives = 35/75 (46%)
Query: 252 LGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDK-DISLSGEHVREGLTCIISV 310
+ + NSI GG H + V + L + KK K+K +++ V+ + ++
Sbjct: 310 VSFVNSIDKNKGGRHTDYVADQIVSKLIEVVKK----KNKAGVAVKPFQVKNHMWLFVNC 365
Query: 311 RVPNPEFEGQTKTRL 325
+ NP F+ QTK +
Sbjct: 366 LIENPSFDSQTKENM 380
>DICTYBASE|DDB_G0270418 [details] [associations]
symbol:top2 "DNA topoisomerase II" species:44689
"Dictyostelium discoideum" [GO:0006265 "DNA topological change"
evidence=IEA;ISS;IBA] [GO:0006259 "DNA metabolic process"
evidence=IEA] [GO:0005694 "chromosome" evidence=IEA;ISS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003918 "DNA
topoisomerase type II (ATP-hydrolyzing) activity"
evidence=IEA;ISS;IBA] [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=IEA;ISS] [GO:0009295 "nucleoid"
evidence=IBA] [GO:0044774 "mitotic DNA integrity checkpoint"
evidence=IBA] [GO:0007059 "chromosome segregation" evidence=IBA]
[GO:0006312 "mitotic recombination" evidence=IBA] [GO:0006261
"DNA-dependent DNA replication" evidence=IBA] [GO:0000819 "sister
chromatid segregation" evidence=IBA] [GO:0000795 "synaptonemal
complex" evidence=IBA] [GO:0000712 "resolution of meiotic
recombination intermediates" evidence=IBA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0016853 "isomerase activity"
evidence=IEA] [GO:0003916 "DNA topoisomerase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR001241
InterPro:IPR002205 InterPro:IPR003594 InterPro:IPR013506
InterPro:IPR013757 InterPro:IPR013758 InterPro:IPR013759
InterPro:IPR013760 InterPro:IPR018522 Pfam:PF00204 Pfam:PF00521
Pfam:PF02518 PRINTS:PR00418 PROSITE:PS00177 SMART:SM00387
SMART:SM00433 SMART:SM00434 dictyBase:DDB_G0270418 Pfam:PF01751
InterPro:IPR006171 GO:GO:0005524 EMBL:AAFI02000005
GenomeReviews:CM000150_GR GO:GO:0006261 Gene3D:3.30.565.10
SUPFAM:SSF55874 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 Gene3D:3.30.1360.40
InterPro:IPR024946 GO:GO:0000819 GO:GO:0006312 GO:GO:0070683
GO:GO:0000712 GO:GO:0000795 GO:GO:0006265 GO:GO:0003918
Gene3D:3.90.199.10 SUPFAM:SSF56719 Gene3D:1.10.268.10
eggNOG:COG0187 Gene3D:3.40.50.670 PROSITE:PS50880 KO:K03164
ProtClustDB:PTZ00108 OMA:ADNKQND RefSeq:XP_646786.1 HSSP:P11388
ProteinModelPortal:Q55BP5 SMR:Q55BP5 STRING:Q55BP5 PRIDE:Q55BP5
EnsemblProtists:DDB0231510 GeneID:8617759 KEGG:ddi:DDB_G0270418
Uniprot:Q55BP5
Length = 1521
Score = 241 (89.9 bits), Expect = 7.1e-19, Sum P(2) = 7.1e-19
Identities = 89/367 (24%), Positives = 162/367 (44%)
Query: 252 LGYANSIRTIDGGTHIEGVKASLTRTLNS-LGKKSKTVKDKDISLSGEHVREGLTCIISV 310
+ + NSI T+ GGTH+ +++ + + KK+K D + H+ + C+I
Sbjct: 381 VSFVNSICTVKGGTHVTHALSNIVTAIQEQVNKKNKGSADIKPAFIKNHLSVFVNCLIE- 439
Query: 311 RVPNPEFEGQTKTRLGNPEVRKVVD--QSVQEYLTEYLELHPDVXXXXXXXXXXXXXXXX 368
NP F+ QTK L + ++ + ++++ L+ +
Sbjct: 440 ---NPHFDSQTKETLTS-KISSFGSRCEPSEKFIKRVLDSKSGIVASILEFAQFKDQSAL 495
Query: 369 XXXXXXXXVRQKSVLRSSSLPGKLADCS---STTPEESEIFIVEGDSAGGSAKQGRD--- 422
+ K S+P KL D + T E+ + + EGDSA A G
Sbjct: 496 KRSTSSGGKKGKV-----SIP-KLDDANLAGGTKSEDCTLILTEGDSAKSLATAGISVVG 549
Query: 423 RRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEA-LRYHKIIIL 481
+ PL+GK+LNV R + N+EI N++ LGL G+ ++ + LRY ++I+
Sbjct: 550 KDHYGAFPLKGKLLNV-RDQSTKVINNDEINNIVTILGLKY-GKVYETLSDLRYGHLMIM 607
Query: 482 TDADVDGAHIRTLLLTFFYRYQKTLFD-EGCIYVGVPPLYKVERGKQVQYC-YDDAELKK 539
TD D DG+HI+ L++ + + TL G + + P+ KV + Q Y E K
Sbjct: 608 TDQDHDGSHIKGLIINMVHHFWPTLLRMPGFLVEFITPIVKVFKNNQKPISFYTMPEFLK 667
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
+ + ++ + ++ +KGLG P + E + E+ + ++ A N+ + +
Sbjct: 668 WRET--NDKGWDVKYYKGLGTSTPGEGKEYFSDLERHKI-DFEWDEGANDNIELA-FSKS 723
Query: 600 RVDTRKE 606
R D RK+
Sbjct: 724 RADDRKK 730
Score = 74 (31.1 bits), Expect = 7.1e-19, Sum P(2) = 7.1e-19
Identities = 19/51 (37%), Positives = 29/51 (56%)
Query: 10 GLHHLVYEILDNAVDEAQA-GYASNIEVALLADNS-VSVADNGRGIPIDLH 58
G++ + EIL NA D Q G I+V + + +SV ++G GIPI +H
Sbjct: 152 GIYKIFDEILVNAADNKQREGNMKFIKVVIDREKGFISVTNDGAGIPIQVH 202
Score = 44 (20.5 bits), Expect = 9.4e-16, Sum P(2) = 9.4e-16
Identities = 12/40 (30%), Positives = 19/40 (47%)
Query: 108 EVTVWRDGMEYHQKYSRGKPVTTLTCHVL--PVDSKDRQG 145
E+ VW D H+K S + + +L D+K R+G
Sbjct: 133 ELWVWEDKRMVHRKVSFVPGIYKIFDEILVNAADNKQREG 172
Score = 39 (18.8 bits), Expect = 3.1e-15, Sum P(2) = 3.1e-15
Identities = 7/26 (26%), Positives = 13/26 (50%)
Query: 138 VDSKDRQGTRIRFWPDKQVFTTAIQF 163
+ S +RQ + W DK++ + F
Sbjct: 124 IGSTERQEEELWVWEDKRMVHRKVSF 149
>CGD|CAL0005199 [details] [associations]
symbol:TOP2 species:5476 "Candida albicans" [GO:0003918 "DNA
topoisomerase type II (ATP-hydrolyzing) activity" evidence=IGI;ISS]
[GO:0036244 "cellular response to neutral pH" evidence=IMP]
[GO:0009267 "cellular response to starvation" evidence=IMP]
[GO:0030447 "filamentous growth" evidence=IMP] [GO:0097047 "DNA
replication termination region" evidence=IEA] [GO:0000795
"synaptonemal complex" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0036170 "filamentous growth of a population of
unicellular organisms in response to starvation" evidence=IMP]
[GO:0036178 "filamentous growth of a population of unicellular
organisms in response to neutral pH" evidence=IMP] [GO:0006406
"mRNA export from nucleus" evidence=IEA] [GO:0006333 "chromatin
assembly or disassembly" evidence=IEA] [GO:0044774 "mitotic DNA
integrity checkpoint" evidence=IEA] [GO:0000712 "resolution of
meiotic recombination intermediates" evidence=IEA] [GO:0097046
"replication fork progression beyond termination site"
evidence=IEA] [GO:0031055 "chromatin remodeling at centromere"
evidence=IEA] [GO:0006271 "DNA strand elongation involved in DNA
replication" evidence=IEA] [GO:0007076 "mitotic chromosome
condensation" evidence=IEA] [GO:0000019 "regulation of mitotic
recombination" evidence=IEA] [GO:0042790 "transcription of nuclear
large rRNA transcript from RNA polymerase I promoter" evidence=IEA]
[GO:0006265 "DNA topological change" evidence=IEA]
InterPro:IPR001241 InterPro:IPR002205 InterPro:IPR003594
InterPro:IPR013506 InterPro:IPR013757 InterPro:IPR013758
InterPro:IPR013759 InterPro:IPR013760 Pfam:PF00204 Pfam:PF00521
Pfam:PF02518 PRINTS:PR00418 SMART:SM00387 SMART:SM00433
SMART:SM00434 CGD:CAL0005199 Pfam:PF01751 InterPro:IPR006171
GO:GO:0005524 GO:GO:0005694 GO:GO:0036244 GO:GO:0036178
GO:GO:0009267 Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0036170
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 Gene3D:3.30.1360.40 InterPro:IPR024946
GO:GO:0006265 EMBL:AACQ01000084 EMBL:AACQ01000083 GO:GO:0003918
Gene3D:3.90.199.10 SUPFAM:SSF56719 Gene3D:1.10.268.10
Gene3D:3.40.50.670 KO:K03164 RefSeq:XP_715530.1 RefSeq:XP_715586.1
ProteinModelPortal:Q5A1E7 SMR:Q5A1E7 STRING:Q5A1E7 GeneID:3642722
GeneID:3642777 KEGG:cal:CaO19.10391 KEGG:cal:CaO19.2873
Uniprot:Q5A1E7
Length = 1461
Score = 255 (94.8 bits), Expect = 5.3e-18, P = 5.3e-18
Identities = 105/397 (26%), Positives = 168/397 (42%)
Query: 244 SDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTL-NSLGKKSKTVKDKDISLSGEHVRE 302
SD S + + NSI T GGTH++ V + L +L KK K K + + + VR+
Sbjct: 344 SDG-SFNQVSFVNSIATTSGGTHVKYVSDQIINKLVETLSKKEKG--KKKLMIKPQEVRD 400
Query: 303 GLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVXXXXXXXXXX 362
+ I+ + NP F QTK +L KV ++ + ++
Sbjct: 401 NMFLFINCLIENPAFTSQTKEQL----TTKVSQFGGKDKFVA----NDNLINRILKTSIV 452
Query: 363 XXXXXXXXXXXXXXVRQKSVLRSSSLPGK--LADCSSTTPEESE---IFIVEGDSAGGSA 417
+++ R S + G+ L D + ++ + + EG SA A
Sbjct: 453 DKIRAIANANEDKALQKADGSRKSRIKGQVNLVDANKAGTKDGHNCTLILTEGLSAMNLA 512
Query: 418 KQGRD---RRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVK----GEDFKK 470
G R + PLRGK+LNV + KN EI +L + +GL K E+ K
Sbjct: 513 VAGLSVVGRDYYGCFPLRGKLLNVREASADQISKNAEINSLKQIIGLQHKKVYTAENIK- 571
Query: 471 EALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFD-EGCIYVGVPPLYKVE------ 523
+LRY I+I+TD D DG+HI+ L++ F L D G + + P+ KV
Sbjct: 572 -SLRYGHIMIMTDQDQDGSHIKGLIINFLETSFPGLLDIPGFLLEFITPIVKVTVKARGA 630
Query: 524 RGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWE--TTLNPEQRMLKQL 581
GK+V Y E + + + ++ + +KGLG P++ E T L+ + L
Sbjct: 631 GGKRVIPFYTMPEFEHWRDTEGKQCRWTQKYYKGLGTSTPMEAREYFTALDRHLKRFHAL 690
Query: 582 VIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLD 618
ED ++ FS + D RKE +Q +LD
Sbjct: 691 QGEDKDYIDLAFSK---KKADERKEWLQGFLPGTHLD 724
Score = 157 (60.3 bits), Expect = 2.3e-07, P = 2.3e-07
Identities = 78/324 (24%), Positives = 129/324 (39%)
Query: 10 GLHHLVYEILDNAVD-EAQAGYASNIEVALLADNSV-SVADNGRGIPIDLHPATNKSALE 67
GL+ + EIL NA D + + NI V + A+N++ V ++G+GIPI++H N E
Sbjct: 109 GLYKIFDEILVNAADNKIRDPSMKNIRVKIDAENNIIEVMNDGKGIPIEMHTKENMYIPE 168
Query: 68 TVLTVLHAXXXXXXXXXXXXXXXXXXXXXXXXXNALSESLEVTVWRDGMEYHQKYSRGKP 127
+ L N S EV M K S
Sbjct: 169 LIFGNL--LTSSNYDDDQKKVTGGRNGFGAKLCNIFSTQFEVETADLNMGKLYKQSWTNN 226
Query: 128 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 187
++ ++ + ++ T+I F PD F D N + +R + L ++
Sbjct: 227 MSNVSKPKITTLRPKKEYTKITFRPDLSKFDMDC-LD-NDLLSVLRRRVY---DLCGTVK 281
Query: 188 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGITIDLAL-QW-CSD 245
+ + N F G +E YV+ + G K+ I ++ +W +
Sbjct: 282 NCNIYLNDKRLNISSFKGYVEMYVKAIKERSPEPEPQDGTIKNFTTIVHEVFNDRWEVAF 341
Query: 246 AYSD---TMLGYANSIRTIDGGTHIEGVKASLTRTL-NSLGKKSKTVKDKDISLSGEHVR 301
A SD + + NSI T GGTH++ V + L +L KK K K + + + VR
Sbjct: 342 AVSDGSFNQVSFVNSIATTSGGTHVKYVSDQIINKLVETLSKKEKG--KKKLMIKPQEVR 399
Query: 302 EGLTCIISVRVPNPEFEGQTKTRL 325
+ + I+ + NP F QTK +L
Sbjct: 400 DNMFLFINCLIENPAFTSQTKEQL 423
>UNIPROTKB|Q5A1E7 [details] [associations]
symbol:TOP2 "DNA topoisomerase 2" species:237561 "Candida
albicans SC5314" [GO:0003918 "DNA topoisomerase type II
(ATP-hydrolyzing) activity" evidence=IGI] [GO:0009267 "cellular
response to starvation" evidence=IMP] [GO:0030447 "filamentous
growth" evidence=IMP] [GO:0036170 "filamentous growth of a
population of unicellular organisms in response to starvation"
evidence=IMP] [GO:0036178 "filamentous growth of a population of
unicellular organisms in response to neutral pH" evidence=IMP]
[GO:0036244 "cellular response to neutral pH" evidence=IMP]
InterPro:IPR001241 InterPro:IPR002205 InterPro:IPR003594
InterPro:IPR013506 InterPro:IPR013757 InterPro:IPR013758
InterPro:IPR013759 InterPro:IPR013760 Pfam:PF00204 Pfam:PF00521
Pfam:PF02518 PRINTS:PR00418 SMART:SM00387 SMART:SM00433
SMART:SM00434 CGD:CAL0005199 Pfam:PF01751 InterPro:IPR006171
GO:GO:0005524 GO:GO:0005694 GO:GO:0036244 GO:GO:0036178
GO:GO:0009267 Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0036170
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 Gene3D:3.30.1360.40 InterPro:IPR024946
GO:GO:0006265 EMBL:AACQ01000084 EMBL:AACQ01000083 GO:GO:0003918
Gene3D:3.90.199.10 SUPFAM:SSF56719 Gene3D:1.10.268.10
Gene3D:3.40.50.670 KO:K03164 RefSeq:XP_715530.1 RefSeq:XP_715586.1
ProteinModelPortal:Q5A1E7 SMR:Q5A1E7 STRING:Q5A1E7 GeneID:3642722
GeneID:3642777 KEGG:cal:CaO19.10391 KEGG:cal:CaO19.2873
Uniprot:Q5A1E7
Length = 1461
Score = 255 (94.8 bits), Expect = 5.3e-18, P = 5.3e-18
Identities = 105/397 (26%), Positives = 168/397 (42%)
Query: 244 SDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTL-NSLGKKSKTVKDKDISLSGEHVRE 302
SD S + + NSI T GGTH++ V + L +L KK K K + + + VR+
Sbjct: 344 SDG-SFNQVSFVNSIATTSGGTHVKYVSDQIINKLVETLSKKEKG--KKKLMIKPQEVRD 400
Query: 303 GLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVXXXXXXXXXX 362
+ I+ + NP F QTK +L KV ++ + ++
Sbjct: 401 NMFLFINCLIENPAFTSQTKEQL----TTKVSQFGGKDKFVA----NDNLINRILKTSIV 452
Query: 363 XXXXXXXXXXXXXXVRQKSVLRSSSLPGK--LADCSSTTPEESE---IFIVEGDSAGGSA 417
+++ R S + G+ L D + ++ + + EG SA A
Sbjct: 453 DKIRAIANANEDKALQKADGSRKSRIKGQVNLVDANKAGTKDGHNCTLILTEGLSAMNLA 512
Query: 418 KQGRD---RRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVK----GEDFKK 470
G R + PLRGK+LNV + KN EI +L + +GL K E+ K
Sbjct: 513 VAGLSVVGRDYYGCFPLRGKLLNVREASADQISKNAEINSLKQIIGLQHKKVYTAENIK- 571
Query: 471 EALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFD-EGCIYVGVPPLYKVE------ 523
+LRY I+I+TD D DG+HI+ L++ F L D G + + P+ KV
Sbjct: 572 -SLRYGHIMIMTDQDQDGSHIKGLIINFLETSFPGLLDIPGFLLEFITPIVKVTVKARGA 630
Query: 524 RGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWE--TTLNPEQRMLKQL 581
GK+V Y E + + + ++ + +KGLG P++ E T L+ + L
Sbjct: 631 GGKRVIPFYTMPEFEHWRDTEGKQCRWTQKYYKGLGTSTPMEAREYFTALDRHLKRFHAL 690
Query: 582 VIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLD 618
ED ++ FS + D RKE +Q +LD
Sbjct: 691 QGEDKDYIDLAFSK---KKADERKEWLQGFLPGTHLD 724
Score = 157 (60.3 bits), Expect = 2.3e-07, P = 2.3e-07
Identities = 78/324 (24%), Positives = 129/324 (39%)
Query: 10 GLHHLVYEILDNAVD-EAQAGYASNIEVALLADNSV-SVADNGRGIPIDLHPATNKSALE 67
GL+ + EIL NA D + + NI V + A+N++ V ++G+GIPI++H N E
Sbjct: 109 GLYKIFDEILVNAADNKIRDPSMKNIRVKIDAENNIIEVMNDGKGIPIEMHTKENMYIPE 168
Query: 68 TVLTVLHAXXXXXXXXXXXXXXXXXXXXXXXXXNALSESLEVTVWRDGMEYHQKYSRGKP 127
+ L N S EV M K S
Sbjct: 169 LIFGNL--LTSSNYDDDQKKVTGGRNGFGAKLCNIFSTQFEVETADLNMGKLYKQSWTNN 226
Query: 128 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 187
++ ++ + ++ T+I F PD F D N + +R + L ++
Sbjct: 227 MSNVSKPKITTLRPKKEYTKITFRPDLSKFDMDC-LD-NDLLSVLRRRVY---DLCGTVK 281
Query: 188 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGITIDLAL-QW-CSD 245
+ + N F G +E YV+ + G K+ I ++ +W +
Sbjct: 282 NCNIYLNDKRLNISSFKGYVEMYVKAIKERSPEPEPQDGTIKNFTTIVHEVFNDRWEVAF 341
Query: 246 AYSD---TMLGYANSIRTIDGGTHIEGVKASLTRTL-NSLGKKSKTVKDKDISLSGEHVR 301
A SD + + NSI T GGTH++ V + L +L KK K K + + + VR
Sbjct: 342 AVSDGSFNQVSFVNSIATTSGGTHVKYVSDQIINKLVETLSKKEKG--KKKLMIKPQEVR 399
Query: 302 EGLTCIISVRVPNPEFEGQTKTRL 325
+ + I+ + NP F QTK +L
Sbjct: 400 DNMFLFINCLIENPAFTSQTKEQL 423
>ASPGD|ASPL0000029372 [details] [associations]
symbol:top2 species:162425 "Emericella nidulans"
[GO:0003918 "DNA topoisomerase type II (ATP-hydrolyzing) activity"
evidence=ISS] [GO:0006265 "DNA topological change" evidence=ISS]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005694
"chromosome" evidence=IEA] [GO:0006406 "mRNA export from nucleus"
evidence=IEA] [GO:0000712 "resolution of meiotic recombination
intermediates" evidence=IEA] [GO:0006325 "chromatin organization"
evidence=IEA] [GO:0042790 "transcription of nuclear large rRNA
transcript from RNA polymerase I promoter" evidence=IEA]
[GO:0007076 "mitotic chromosome condensation" evidence=IEA]
InterPro:IPR001241 InterPro:IPR002205 InterPro:IPR003594
InterPro:IPR013506 InterPro:IPR013757 InterPro:IPR013758
InterPro:IPR013759 InterPro:IPR013760 InterPro:IPR017956
Pfam:PF00204 Pfam:PF00521 Pfam:PF02518 PRINTS:PR00418 SMART:SM00384
SMART:SM00387 SMART:SM00433 SMART:SM00434 Pfam:PF01751
InterPro:IPR006171 GO:GO:0005524 GO:GO:0006261 EMBL:BN001305
Gene3D:3.30.565.10 SUPFAM:SSF55874 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211
Gene3D:3.30.1360.40 InterPro:IPR024946 GO:GO:0000819 GO:GO:0006312
EMBL:AACD01000094 GO:GO:0070683 GO:GO:0000712 GO:GO:0000795
GO:GO:0006265 GO:GO:0003918 Gene3D:3.90.199.10 SUPFAM:SSF56719
Gene3D:1.10.268.10 Gene3D:3.40.50.670 KO:K03164
HOGENOM:HOG000216693 OMA:ADNKQND OrthoDB:EOG4XPTPZ
RefSeq:XP_663010.1 ProteinModelPortal:Q5B224 SMR:Q5B224
STRING:Q5B224 EnsemblFungi:CADANIAT00003686 GeneID:2871696
KEGG:ani:AN5406.2 Uniprot:Q5B224
Length = 1709
Score = 227 (85.0 bits), Expect = 9.7e-18, Sum P(2) = 9.7e-18
Identities = 96/389 (24%), Positives = 158/389 (40%)
Query: 244 SDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREG 303
SD S + + NSI T GGTH+ + + L+ KK+K K L +R
Sbjct: 394 SDG-SFKQVSFVNSIATTSGGTHVNYIADQIAGKLSESLKKNK--KGTGSILKPAQIRNY 450
Query: 304 LTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVXXXXXXXXXXX 363
++ ++ NP F QTK +L + + + E +L+
Sbjct: 451 CFLFVNAKIVNPAFSSQTKEQLTTKQTQFGSKPILDE---SFLK------KVANSGVLDS 501
Query: 364 XXXXXXXXXXXXXVRQKSVLRSSSLPGKLADCSSTTPEES---EIFIVEGDSAGGSAKQG 420
+ RS KL D + ++ + + EG+SA G A G
Sbjct: 502 LKRFADHKADLMLKKSDGGRRSRMNNPKLTDANRAGTKDGYKCTLILTEGESAKGLAMAG 561
Query: 421 R---DRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHK 477
R + PLRGK+LNV + KNEEIQ++ +GL K E + LRY
Sbjct: 562 RAVVGADLFGVYPLRGKMLNVRDASFDQISKNEEIQSIKNFMGLQHKKEYTDTKGLRYGH 621
Query: 478 IIILTDADVDGAHIRTLLLTFFY-RYQKTLFDEGCIYVGVPPLYKVERG------KQVQY 530
++I+TD D DG+HI+ LL+ F ++ L + + P+ KV +G KQ +
Sbjct: 622 LMIMTDQDHDGSHIKGLLINFLEAQFPSLLKIPEFLIEFITPIVKVWKGDIKDPTKQHSF 681
Query: 531 CYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEAN 590
+ E K + + +KGLG + E + + R LK+ + E
Sbjct: 682 -FTIQEYNAWKEKHGHERGWEHKYYKGLGTSSTEEAQEYFRDLD-RHLKEFHVMQDKEHE 739
Query: 591 VVFSSLMGARVDTRKELIQNAANLVNLDH 619
++ + +V+ RKE ++ +DH
Sbjct: 740 LIELAFSKKKVEERKEWLRQYNPDTFMDH 768
Score = 79 (32.9 bits), Expect = 9.7e-18, Sum P(2) = 9.7e-18
Identities = 19/51 (37%), Positives = 29/51 (56%)
Query: 10 GLHHLVYEILDNAVDEAQAG-YASNIEVALLAD-NSVSVADNGRGIPIDLH 58
GL+ + EI+ NA D Q I V + N +SV +NG+GIP+++H
Sbjct: 167 GLYKIFDEIVVNAADNKQNDDNMDEIRVTYSRETNEISVWNNGKGIPVEMH 217
Score = 37 (18.1 bits), Expect = 2.2e-13, Sum P(2) = 2.2e-13
Identities = 7/22 (31%), Positives = 15/22 (68%)
Query: 105 ESLEVTVWRDG----MEYHQKY 122
E+ E++VW +G +E H+++
Sbjct: 199 ETNEISVWNNGKGIPVEMHEEH 220
>UNIPROTKB|Q5B224 [details] [associations]
symbol:AN5406.2 "DNA topoisomerase 2" species:227321
"Aspergillus nidulans FGSC A4" [GO:0000712 "resolution of meiotic
recombination intermediates" evidence=IBA] [GO:0000795
"synaptonemal complex" evidence=IBA] [GO:0000819 "sister chromatid
segregation" evidence=IBA] [GO:0003918 "DNA topoisomerase type II
(ATP-hydrolyzing) activity" evidence=IBA] [GO:0006261
"DNA-dependent DNA replication" evidence=IBA] [GO:0006265 "DNA
topological change" evidence=IBA] [GO:0006312 "mitotic
recombination" evidence=IBA] [GO:0007059 "chromosome segregation"
evidence=IBA] [GO:0009295 "nucleoid" evidence=IBA]
InterPro:IPR001241 InterPro:IPR002205 InterPro:IPR003594
InterPro:IPR013506 InterPro:IPR013757 InterPro:IPR013758
InterPro:IPR013759 InterPro:IPR013760 InterPro:IPR017956
Pfam:PF00204 Pfam:PF00521 Pfam:PF02518 PRINTS:PR00418 SMART:SM00384
SMART:SM00387 SMART:SM00433 SMART:SM00434 Pfam:PF01751
InterPro:IPR006171 GO:GO:0005524 GO:GO:0006261 EMBL:BN001305
Gene3D:3.30.565.10 SUPFAM:SSF55874 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211
Gene3D:3.30.1360.40 InterPro:IPR024946 GO:GO:0000819 GO:GO:0006312
EMBL:AACD01000094 GO:GO:0070683 GO:GO:0000712 GO:GO:0000795
GO:GO:0006265 GO:GO:0003918 Gene3D:3.90.199.10 SUPFAM:SSF56719
Gene3D:1.10.268.10 Gene3D:3.40.50.670 KO:K03164
HOGENOM:HOG000216693 OMA:ADNKQND OrthoDB:EOG4XPTPZ
RefSeq:XP_663010.1 ProteinModelPortal:Q5B224 SMR:Q5B224
STRING:Q5B224 EnsemblFungi:CADANIAT00003686 GeneID:2871696
KEGG:ani:AN5406.2 Uniprot:Q5B224
Length = 1709
Score = 227 (85.0 bits), Expect = 9.7e-18, Sum P(2) = 9.7e-18
Identities = 96/389 (24%), Positives = 158/389 (40%)
Query: 244 SDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREG 303
SD S + + NSI T GGTH+ + + L+ KK+K K L +R
Sbjct: 394 SDG-SFKQVSFVNSIATTSGGTHVNYIADQIAGKLSESLKKNK--KGTGSILKPAQIRNY 450
Query: 304 LTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVXXXXXXXXXXX 363
++ ++ NP F QTK +L + + + E +L+
Sbjct: 451 CFLFVNAKIVNPAFSSQTKEQLTTKQTQFGSKPILDE---SFLK------KVANSGVLDS 501
Query: 364 XXXXXXXXXXXXXVRQKSVLRSSSLPGKLADCSSTTPEES---EIFIVEGDSAGGSAKQG 420
+ RS KL D + ++ + + EG+SA G A G
Sbjct: 502 LKRFADHKADLMLKKSDGGRRSRMNNPKLTDANRAGTKDGYKCTLILTEGESAKGLAMAG 561
Query: 421 R---DRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHK 477
R + PLRGK+LNV + KNEEIQ++ +GL K E + LRY
Sbjct: 562 RAVVGADLFGVYPLRGKMLNVRDASFDQISKNEEIQSIKNFMGLQHKKEYTDTKGLRYGH 621
Query: 478 IIILTDADVDGAHIRTLLLTFFY-RYQKTLFDEGCIYVGVPPLYKVERG------KQVQY 530
++I+TD D DG+HI+ LL+ F ++ L + + P+ KV +G KQ +
Sbjct: 622 LMIMTDQDHDGSHIKGLLINFLEAQFPSLLKIPEFLIEFITPIVKVWKGDIKDPTKQHSF 681
Query: 531 CYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEAN 590
+ E K + + +KGLG + E + + R LK+ + E
Sbjct: 682 -FTIQEYNAWKEKHGHERGWEHKYYKGLGTSSTEEAQEYFRDLD-RHLKEFHVMQDKEHE 739
Query: 591 VVFSSLMGARVDTRKELIQNAANLVNLDH 619
++ + +V+ RKE ++ +DH
Sbjct: 740 LIELAFSKKKVEERKEWLRQYNPDTFMDH 768
Score = 79 (32.9 bits), Expect = 9.7e-18, Sum P(2) = 9.7e-18
Identities = 19/51 (37%), Positives = 29/51 (56%)
Query: 10 GLHHLVYEILDNAVDEAQAG-YASNIEVALLAD-NSVSVADNGRGIPIDLH 58
GL+ + EI+ NA D Q I V + N +SV +NG+GIP+++H
Sbjct: 167 GLYKIFDEIVVNAADNKQNDDNMDEIRVTYSRETNEISVWNNGKGIPVEMH 217
Score = 37 (18.1 bits), Expect = 2.2e-13, Sum P(2) = 2.2e-13
Identities = 7/22 (31%), Positives = 15/22 (68%)
Query: 105 ESLEVTVWRDG----MEYHQKY 122
E+ E++VW +G +E H+++
Sbjct: 199 ETNEISVWNNGKGIPVEMHEEH 220
>WB|WBGene00022854 [details] [associations]
symbol:cin-4 species:6239 "Caenorhabditis elegans"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003918 "DNA
topoisomerase type II (ATP-hydrolyzing) activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005694 "chromosome"
evidence=IEA] [GO:0006265 "DNA topological change" evidence=IEA]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0051301 "cell division" evidence=IMP] [GO:0000910
"cytokinesis" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0016246 "RNA interference" evidence=IMP]
InterPro:IPR001241 InterPro:IPR002205 InterPro:IPR013757
InterPro:IPR013758 InterPro:IPR013759 InterPro:IPR013760
InterPro:IPR018522 Pfam:PF00521 PRINTS:PR00418 PROSITE:PS00177
SMART:SM00433 SMART:SM00434 GO:GO:0005524 GO:GO:0009792
GO:GO:0016246 GO:GO:0006261 GO:GO:0000910 Gene3D:3.30.1360.40
InterPro:IPR024946 GO:GO:0000819 GO:GO:0006312 EMBL:FO081697
GO:GO:0070683 GO:GO:0000712 GO:GO:0000795 GO:GO:0006265
GO:GO:0003918 Gene3D:3.90.199.10 SUPFAM:SSF56719 Gene3D:1.10.268.10
Gene3D:3.40.50.670 KO:K03164 GeneTree:ENSGT00390000016222
EMBL:EU191083 RefSeq:NP_495440.4 UniGene:Cel.20522
ProteinModelPortal:G5ECQ8 SMR:G5ECQ8 EnsemblMetazoa:ZK1127.7
GeneID:191525 KEGG:cel:CELE_ZK1127.7 CTD:191525 WormBase:ZK1127.7
OMA:SISIRTM NextBio:949466 Uniprot:G5ECQ8
Length = 842
Score = 193 (73.0 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 69/245 (28%), Positives = 117/245 (47%)
Query: 384 RSSSLPG--KLADCSSTTPEESE---IFIVEGDSA-----GGSAKQGRDRRFQAILPLRG 433
++S L G KL D + + S+ + + EGDSA G + GRD+ + P R
Sbjct: 33 KTSKLKGIPKLEDANDAGTKNSQQCTLILTEGDSAKTLAVSGLSVVGRDK--YGVFPFRR 90
Query: 434 KILNVERKDEAAMYKNEEIQNLIRALGLGV--KGE---DFKKEALRYHKIIILTDADVDG 488
K+LNV + + + E+ +I+ LGL K E DFK LRY K++I+ + D DG
Sbjct: 91 KLLNVCDLNVNQIADSAEVNAIIKILGLQYTKKYETEDDFK--TLRYGKLLIMANHDSDG 148
Query: 489 AHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNA 548
+ + LLL FF+R+ LF + + P+ K GK+ Y E + + + +
Sbjct: 149 SQFKGLLLNFFHRFWPALFKRDFVEDFITPIAKATEGKEEVSFYSLPEYSEWRMNTDNWK 208
Query: 549 LYSIQRFKGLGEMMPVQLWETTLNPEQRML--KQLVIEDAAEANVVFSSL-MGARVDTRK 605
Y+I+ + GLG + + + + + + K +D N+ FS + AR D
Sbjct: 209 SYTIKYYNGLGTLTSKEAKKCFSDMVRHRIRFKYNGADDDKAVNMAFSKKKIEARTDYLM 268
Query: 606 ELIQN 610
+L+Q+
Sbjct: 269 KLMQD 273
>UNIPROTKB|G5ECQ8 [details] [associations]
symbol:cin-4 "Chromosome instability 4" species:6239
"Caenorhabditis elegans" [GO:0009295 "nucleoid" evidence=IBA]
[GO:0007059 "chromosome segregation" evidence=IBA] [GO:0006312
"mitotic recombination" evidence=IBA] [GO:0006265 "DNA topological
change" evidence=IBA] [GO:0006261 "DNA-dependent DNA replication"
evidence=IBA] [GO:0003918 "DNA topoisomerase type II
(ATP-hydrolyzing) activity" evidence=IBA] [GO:0000819 "sister
chromatid segregation" evidence=IBA] [GO:0000795 "synaptonemal
complex" evidence=IBA] [GO:0000712 "resolution of meiotic
recombination intermediates" evidence=IBA] InterPro:IPR001241
InterPro:IPR002205 InterPro:IPR013757 InterPro:IPR013758
InterPro:IPR013759 InterPro:IPR013760 InterPro:IPR018522
Pfam:PF00521 PRINTS:PR00418 PROSITE:PS00177 SMART:SM00433
SMART:SM00434 GO:GO:0005524 GO:GO:0009792 GO:GO:0016246
GO:GO:0006261 GO:GO:0000910 Gene3D:3.30.1360.40 InterPro:IPR024946
GO:GO:0000819 GO:GO:0006312 EMBL:FO081697 GO:GO:0070683
GO:GO:0000712 GO:GO:0000795 GO:GO:0006265 GO:GO:0003918
Gene3D:3.90.199.10 SUPFAM:SSF56719 Gene3D:1.10.268.10
Gene3D:3.40.50.670 KO:K03164 GeneTree:ENSGT00390000016222
EMBL:EU191083 RefSeq:NP_495440.4 UniGene:Cel.20522
ProteinModelPortal:G5ECQ8 SMR:G5ECQ8 EnsemblMetazoa:ZK1127.7
GeneID:191525 KEGG:cel:CELE_ZK1127.7 CTD:191525 WormBase:ZK1127.7
OMA:SISIRTM NextBio:949466 Uniprot:G5ECQ8
Length = 842
Score = 193 (73.0 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 69/245 (28%), Positives = 117/245 (47%)
Query: 384 RSSSLPG--KLADCSSTTPEESE---IFIVEGDSA-----GGSAKQGRDRRFQAILPLRG 433
++S L G KL D + + S+ + + EGDSA G + GRD+ + P R
Sbjct: 33 KTSKLKGIPKLEDANDAGTKNSQQCTLILTEGDSAKTLAVSGLSVVGRDK--YGVFPFRR 90
Query: 434 KILNVERKDEAAMYKNEEIQNLIRALGLGV--KGE---DFKKEALRYHKIIILTDADVDG 488
K+LNV + + + E+ +I+ LGL K E DFK LRY K++I+ + D DG
Sbjct: 91 KLLNVCDLNVNQIADSAEVNAIIKILGLQYTKKYETEDDFK--TLRYGKLLIMANHDSDG 148
Query: 489 AHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNA 548
+ + LLL FF+R+ LF + + P+ K GK+ Y E + + + +
Sbjct: 149 SQFKGLLLNFFHRFWPALFKRDFVEDFITPIAKATEGKEEVSFYSLPEYSEWRMNTDNWK 208
Query: 549 LYSIQRFKGLGEMMPVQLWETTLNPEQRML--KQLVIEDAAEANVVFSSL-MGARVDTRK 605
Y+I+ + GLG + + + + + + K +D N+ FS + AR D
Sbjct: 209 SYTIKYYNGLGTLTSKEAKKCFSDMVRHRIRFKYNGADDDKAVNMAFSKKKIEARTDYLM 268
Query: 606 ELIQN 610
+L+Q+
Sbjct: 269 KLMQD 273
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.317 0.135 0.389 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 622 573 0.00080 120 3 11 22 0.42 34
36 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 97
No. of states in DFA: 615 (65 KB)
Total size of DFA: 304 KB (2157 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 44.78u 0.21s 44.99t Elapsed: 00:00:02
Total cpu time: 44.81u 0.21s 45.02t Elapsed: 00:00:02
Start: Sat May 11 10:14:13 2013 End: Sat May 11 10:14:15 2013